Query psy17021
Match_columns 199
No_of_seqs 220 out of 502
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 19:46:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17021.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17021hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ei3_A DNA damage-binding prot 100.0 2.2E-28 7.6E-33 244.4 20.7 127 72-199 873-1000(1158)
2 3ei3_A DNA damage-binding prot 99.5 1E-13 3.5E-18 138.8 17.4 163 1-194 876-1058(1158)
3 2ovr_B FBW7, F-BOX/WD repeat p 97.9 0.0017 5.8E-08 56.1 18.9 175 11-197 200-390 (445)
4 1p22_A F-BOX/WD-repeat protein 97.7 0.0095 3.2E-07 51.4 21.5 176 10-196 133-323 (435)
5 2ovr_B FBW7, F-BOX/WD repeat p 97.7 0.0029 1E-07 54.6 17.6 180 11-199 240-443 (445)
6 1p22_A F-BOX/WD-repeat protein 97.6 0.0066 2.3E-07 52.4 19.0 171 11-196 174-363 (435)
7 3odt_A Protein DOA1; ubiquitin 97.6 0.018 6.1E-07 46.0 19.3 107 82-197 102-213 (313)
8 3v7d_B Cell division control p 97.5 0.041 1.4E-06 47.3 21.8 173 12-195 272-460 (464)
9 4g56_B MGC81050 protein; prote 97.4 0.0091 3.1E-07 50.7 16.4 111 83-199 225-344 (357)
10 3jrp_A Fusion protein of prote 97.4 0.04 1.4E-06 45.1 20.8 118 80-197 143-286 (379)
11 3mmy_A MRNA export factor; mRN 97.4 0.031 1.1E-06 45.4 18.8 118 76-197 119-246 (368)
12 3k26_A Polycomb protein EED; W 97.4 0.02 6.7E-07 46.7 17.5 115 83-197 230-365 (366)
13 3odt_A Protein DOA1; ubiquitin 97.3 0.028 9.6E-07 44.9 17.8 111 83-198 183-296 (313)
14 1pgu_A Actin interacting prote 97.3 0.01 3.5E-07 52.3 16.4 114 83-199 487-615 (615)
15 1r5m_A SIR4-interacting protei 97.3 0.014 4.7E-07 48.6 16.4 170 20-197 217-424 (425)
16 1gxr_A ESG1, transducin-like e 97.3 0.018 6.2E-07 46.4 16.6 166 18-196 151-335 (337)
17 1yfq_A Cell cycle arrest prote 97.3 0.025 8.4E-07 46.0 17.5 116 81-197 147-281 (342)
18 3v7d_B Cell division control p 97.3 0.035 1.2E-06 47.7 19.2 109 83-197 269-380 (464)
19 1gxr_A ESG1, transducin-like e 97.3 0.046 1.6E-06 43.9 18.4 108 83-197 182-295 (337)
20 3i2n_A WD repeat-containing pr 97.2 0.017 5.7E-07 47.1 15.7 119 77-197 202-352 (357)
21 3mmy_A MRNA export factor; mRN 97.2 0.013 4.3E-07 47.9 14.3 173 20-197 98-303 (368)
22 3i2n_A WD repeat-containing pr 97.2 0.072 2.4E-06 43.3 18.7 109 86-197 166-290 (357)
23 3jrp_A Fusion protein of prote 97.1 0.076 2.6E-06 43.4 20.8 115 83-197 100-239 (379)
24 3vl1_A 26S proteasome regulato 97.1 0.025 8.6E-07 47.6 15.4 172 15-196 63-276 (420)
25 1pgu_A Actin interacting prote 97.0 0.04 1.4E-06 48.5 17.2 118 77-197 439-571 (615)
26 3scy_A Hypothetical bacterial 97.0 0.07 2.4E-06 44.3 17.9 105 94-198 221-337 (361)
27 4gqb_B Methylosome protein 50; 97.0 0.088 3E-06 44.6 18.5 170 20-195 93-286 (344)
28 1got_B GT-beta; complex (GTP-b 97.0 0.12 4.1E-06 43.0 19.2 111 83-196 183-299 (340)
29 3ow8_A WD repeat-containing pr 97.0 0.061 2.1E-06 44.8 17.0 108 85-197 165-278 (321)
30 4ggc_A P55CDC, cell division c 97.0 0.1 3.4E-06 41.7 19.1 140 20-196 36-179 (318)
31 3bws_A Protein LP49; two-domai 96.9 0.1 3.5E-06 44.1 18.3 110 84-198 302-432 (433)
32 3f3f_A Nucleoporin SEH1; struc 96.9 0.11 3.7E-06 41.4 18.8 114 82-197 108-248 (351)
33 3k26_A Polycomb protein EED; W 96.9 0.073 2.5E-06 43.3 16.6 93 101-197 93-191 (366)
34 1yfq_A Cell cycle arrest prote 96.9 0.094 3.2E-06 42.5 17.2 162 17-190 110-315 (342)
35 3vu4_A KMHSV2; beta-propeller 96.9 0.15 5.2E-06 42.9 20.6 161 24-197 75-270 (355)
36 1got_B GT-beta; complex (GTP-b 96.9 0.13 4.5E-06 42.7 18.4 166 20-194 154-339 (340)
37 4aez_A CDC20, WD repeat-contai 96.9 0.13 4.6E-06 43.5 18.6 111 82-197 257-379 (401)
38 4a11_B DNA excision repair pro 96.9 0.059 2E-06 44.6 15.9 119 77-197 134-275 (408)
39 4aez_A CDC20, WD repeat-contai 96.9 0.17 5.9E-06 42.8 19.6 168 17-198 143-336 (401)
40 3ei3_B DNA damage-binding prot 96.8 0.081 2.8E-06 44.1 16.4 106 85-196 164-280 (383)
41 4h5i_A Guanine nucleotide-exch 96.8 0.19 6.6E-06 42.5 20.3 93 104-198 246-343 (365)
42 1q7f_A NHL, brain tumor CG1071 96.8 0.14 4.9E-06 40.9 22.0 180 12-198 78-280 (286)
43 1sq9_A Antiviral protein SKI8; 96.8 0.18 6E-06 41.8 18.9 112 84-197 233-394 (397)
44 4gga_A P55CDC, cell division c 96.8 0.19 6.5E-06 42.9 18.8 140 20-196 116-259 (420)
45 3vl1_A 26S proteasome regulato 96.8 0.19 6.6E-06 42.1 19.5 102 94-197 258-364 (420)
46 1r5m_A SIR4-interacting protei 96.7 0.081 2.8E-06 43.8 15.6 174 18-197 159-360 (425)
47 4gqb_B Methylosome protein 50; 96.7 0.18 6.3E-06 42.6 17.7 108 86-199 216-332 (344)
48 2vdu_B TRNA (guanine-N(7)-)-me 96.6 0.17 5.7E-06 43.7 17.4 110 84-196 195-337 (450)
49 3bws_A Protein LP49; two-domai 96.6 0.24 8.3E-06 41.7 18.0 186 4-196 116-332 (433)
50 2pbi_B Guanine nucleotide-bind 96.6 0.26 8.8E-06 41.4 18.1 168 20-194 166-353 (354)
51 1k8k_C P40, ARP2/3 complex 41 96.6 0.23 7.9E-06 40.5 19.6 111 84-197 202-360 (372)
52 3zwl_B Eukaryotic translation 96.6 0.22 7.6E-06 40.3 20.7 113 83-197 217-345 (369)
53 2aq5_A Coronin-1A; WD40 repeat 96.6 0.15 5.1E-06 43.0 16.6 115 83-198 175-299 (402)
54 3ow8_A WD repeat-containing pr 96.6 0.26 8.8E-06 40.9 20.0 173 14-197 128-320 (321)
55 4g56_B MGC81050 protein; prote 96.5 0.15 5.1E-06 43.0 16.3 171 20-196 105-299 (357)
56 3vu4_A KMHSV2; beta-propeller 96.5 0.32 1.1E-05 40.9 18.0 174 15-196 26-225 (355)
57 1erj_A Transcriptional repress 96.5 0.24 8.2E-06 42.0 17.3 172 18-196 133-339 (393)
58 3dsm_A Uncharacterized protein 96.4 0.33 1.1E-05 40.5 19.0 174 9-194 42-249 (328)
59 3gre_A Serine/threonine-protei 96.4 0.24 8.2E-06 42.0 16.7 112 83-197 213-358 (437)
60 2vdu_B TRNA (guanine-N(7)-)-me 96.3 0.48 1.6E-05 40.8 22.1 116 83-198 240-391 (450)
61 1nr0_A Actin interacting prote 96.3 0.43 1.5E-05 43.2 18.7 118 79-197 486-610 (611)
62 3dsm_A Uncharacterized protein 96.3 0.3 1E-05 40.7 16.5 181 4-195 77-299 (328)
63 4ery_A WD repeat-containing pr 96.3 0.35 1.2E-05 39.1 20.0 110 83-196 106-221 (312)
64 2pm7_B Protein transport prote 96.2 0.37 1.3E-05 39.1 18.8 97 101-197 178-284 (297)
65 2ynn_A Coatomer subunit beta'; 96.2 0.38 1.3E-05 39.2 19.4 173 15-196 20-215 (304)
66 1vyh_C Platelet-activating fac 96.2 0.51 1.7E-05 40.4 18.5 95 97-196 311-409 (410)
67 3iz6_a 40S ribosomal protein R 96.2 0.4 1.4E-05 40.5 17.1 113 83-197 248-374 (380)
68 2ynn_A Coatomer subunit beta'; 96.2 0.4 1.4E-05 39.0 16.8 92 101-197 206-301 (304)
69 1k8k_C P40, ARP2/3 complex 41 96.2 0.41 1.4E-05 39.0 21.0 95 102-196 73-171 (372)
70 2xyi_A Probable histone-bindin 96.1 0.21 7.1E-06 43.0 15.1 111 83-197 230-352 (430)
71 3lrv_A PRE-mRNA-splicing facto 96.1 0.27 9.4E-06 40.6 15.2 79 83-161 213-299 (343)
72 1sq9_A Antiviral protein SKI8; 96.0 0.43 1.5E-05 39.4 16.2 113 83-197 15-156 (397)
73 3mkq_A Coatomer beta'-subunit; 96.0 0.55 1.9E-05 43.1 18.0 174 15-197 20-216 (814)
74 1erj_A Transcriptional repress 96.0 0.63 2.1E-05 39.4 19.9 109 83-196 164-285 (393)
75 3frx_A Guanine nucleotide-bind 96.0 0.54 1.8E-05 38.6 17.3 90 100-196 173-265 (319)
76 1ri6_A Putative isomerase YBHE 95.9 0.52 1.8E-05 37.8 16.6 103 96-198 191-308 (343)
77 3zwl_B Eukaryotic translation 95.9 0.37 1.3E-05 38.9 14.9 124 68-197 16-150 (369)
78 3sfz_A APAF-1, apoptotic pepti 95.9 0.51 1.7E-05 45.9 18.0 104 90-196 806-911 (1249)
79 3lrv_A PRE-mRNA-splicing facto 95.8 0.37 1.3E-05 39.8 14.8 113 82-196 123-242 (343)
80 3no2_A Uncharacterized protein 95.8 0.65 2.2E-05 38.1 17.8 172 20-198 47-251 (276)
81 3jro_A Fusion protein of prote 95.8 0.93 3.2E-05 42.4 19.0 116 82-197 97-237 (753)
82 2pbi_B Guanine nucleotide-bind 95.7 0.77 2.6E-05 38.4 19.3 108 84-196 154-269 (354)
83 3jro_A Fusion protein of prote 95.7 0.14 4.7E-06 48.1 12.8 102 96-197 172-284 (753)
84 4ery_A WD repeat-containing pr 95.7 0.66 2.3E-05 37.3 16.7 111 83-196 148-266 (312)
85 2xzm_R RACK1; ribosome, transl 95.6 0.78 2.7E-05 37.9 16.2 102 89-196 179-283 (343)
86 2pm9_A Protein WEB1, protein t 95.6 0.17 5.7E-06 42.2 12.0 110 84-197 214-336 (416)
87 2ymu_A WD-40 repeat protein; u 95.6 1.1 3.6E-05 39.3 19.3 109 82-197 424-538 (577)
88 4aow_A Guanine nucleotide-bind 95.5 0.75 2.6E-05 36.9 18.1 111 82-197 213-336 (340)
89 3gre_A Serine/threonine-protei 95.5 0.99 3.4E-05 38.1 17.9 112 84-197 168-291 (437)
90 3frx_A Guanine nucleotide-bind 95.5 0.87 3E-05 37.3 21.0 110 82-197 194-316 (319)
91 2aq5_A Coronin-1A; WD40 repeat 95.4 0.96 3.3E-05 38.0 16.2 112 83-196 130-252 (402)
92 3mkq_A Coatomer beta'-subunit; 95.4 1.3 4.3E-05 40.7 18.1 107 85-197 185-301 (814)
93 1nr0_A Actin interacting prote 95.4 1.5 5.1E-05 39.6 19.1 96 96-197 425-521 (611)
94 1vyh_C Platelet-activating fac 95.4 1.1 3.8E-05 38.2 17.5 110 83-197 233-368 (410)
95 3fm0_A Protein CIAO1; WDR39,SG 95.3 1 3.4E-05 37.4 19.2 101 96-197 75-180 (345)
96 1ri6_A Putative isomerase YBHE 95.2 0.91 3.1E-05 36.3 16.7 121 75-197 74-208 (343)
97 4e54_B DNA damage-binding prot 95.2 0.15 5.1E-06 43.9 10.7 100 94-196 220-325 (435)
98 3dwl_C Actin-related protein 2 95.1 0.15 5.1E-06 42.2 10.1 117 80-197 96-235 (377)
99 3dm0_A Maltose-binding peripla 95.0 0.78 2.7E-05 42.0 15.5 94 97-196 534-630 (694)
100 2xyi_A Probable histone-bindin 95.0 1.5 5.1E-05 37.5 17.9 114 82-198 275-410 (430)
101 3scy_A Hypothetical bacterial 95.0 1.1 3.6E-05 37.0 15.0 84 94-178 269-361 (361)
102 2pm9_A Protein WEB1, protein t 94.9 0.43 1.5E-05 39.6 12.3 113 84-197 165-293 (416)
103 4gga_A P55CDC, cell division c 94.9 1.6 5.4E-05 37.1 16.1 98 94-195 116-215 (420)
104 3dm0_A Maltose-binding peripla 94.8 0.48 1.6E-05 43.4 13.4 99 94-196 441-548 (694)
105 1l0q_A Surface layer protein; 94.7 1.5 5.1E-05 36.2 21.2 181 3-196 24-231 (391)
106 4a11_B DNA excision repair pro 94.7 0.94 3.2E-05 37.1 13.7 97 96-198 307-405 (408)
107 2oaj_A Protein SNI1; WD40 repe 94.5 2.1 7.3E-05 41.1 17.6 95 95-195 69-179 (902)
108 2pm7_B Protein transport prote 94.4 1.6 5.5E-05 35.2 21.1 114 84-197 99-237 (297)
109 3ei3_B DNA damage-binding prot 94.4 1.2 4.1E-05 36.8 13.9 113 82-196 71-192 (383)
110 3dw8_B Serine/threonine-protei 94.4 1.3 4.3E-05 37.2 14.1 115 82-197 175-314 (447)
111 4aow_A Guanine nucleotide-bind 94.4 1.6 5.4E-05 34.9 15.1 89 102-196 194-284 (340)
112 3dwl_C Actin-related protein 2 94.3 1 3.5E-05 37.0 13.2 29 167-195 343-376 (377)
113 4ggc_A P55CDC, cell division c 94.1 1.7 5.8E-05 34.4 15.9 98 94-195 36-135 (318)
114 3sfz_A APAF-1, apoptotic pepti 94.0 1.4 4.8E-05 42.8 15.2 102 89-196 968-1072(1249)
115 3bg1_A Protein SEC13 homolog; 94.0 1.4 4.8E-05 36.0 13.3 71 84-154 57-136 (316)
116 2xzm_R RACK1; ribosome, transl 93.7 2.5 8.5E-05 34.7 15.7 107 85-195 77-200 (343)
117 3f3f_A Nucleoporin SEH1; struc 93.7 2 7E-05 33.8 20.4 102 95-197 183-336 (351)
118 1l0q_A Surface layer protein; 93.7 2.5 8.6E-05 34.8 18.8 155 29-196 12-187 (391)
119 4h5i_A Guanine nucleotide-exch 93.5 2.9 0.0001 35.1 18.1 88 89-182 140-233 (365)
120 3dw8_B Serine/threonine-protei 93.5 1.8 6.3E-05 36.2 13.4 108 86-195 287-443 (447)
121 4e54_B DNA damage-binding prot 93.4 0.48 1.6E-05 40.7 9.9 113 82-196 117-238 (435)
122 3iz6_a 40S ribosomal protein R 93.4 3.1 0.0001 34.9 14.7 99 96-196 172-278 (380)
123 1q7f_A NHL, brain tumor CG1071 93.1 2.7 9.2E-05 33.3 19.8 178 12-195 31-235 (286)
124 3q7m_A Lipoprotein YFGL, BAMB; 93.0 3.4 0.00011 34.3 15.2 173 16-195 184-375 (376)
125 1rwi_B Serine/threonine-protei 93.0 2.5 8.7E-05 32.8 14.6 177 12-198 68-264 (270)
126 3vgz_A Uncharacterized protein 92.8 3.2 0.00011 33.4 20.0 183 5-195 35-259 (353)
127 3v9f_A Two-component system se 92.6 6.5 0.00022 36.6 19.9 149 11-164 363-532 (781)
128 2ymu_A WD-40 repeat protein; u 92.6 4.8 0.00016 35.0 19.1 106 83-195 384-495 (577)
129 2z3z_A Dipeptidyl aminopeptida 92.6 5.8 0.0002 35.8 16.2 95 103-197 235-341 (706)
130 2z2n_A Virginiamycin B lyase; 92.4 3.2 0.00011 32.5 20.3 176 11-197 99-294 (299)
131 2j04_B YDR362CP, TAU91; beta p 92.4 1.7 5.7E-05 39.4 12.3 110 83-195 307-425 (524)
132 3hfq_A Uncharacterized protein 91.6 4.7 0.00016 32.7 17.8 104 94-197 151-270 (347)
133 1pby_B Quinohemoprotein amine 91.6 2.5 8.4E-05 33.6 11.2 42 3-44 23-71 (337)
134 4gq1_A NUP37; propeller, trans 91.6 3.4 0.00012 34.9 12.7 58 137-197 331-388 (393)
135 2hes_X YDR267CP; beta-propelle 91.5 5 0.00017 32.8 21.8 114 83-196 152-278 (330)
136 2w18_A PALB2, fancn, partner a 91.2 4.1 0.00014 35.7 13.0 58 95-152 295-355 (356)
137 3g4e_A Regucalcin; six bladed 91.1 5.2 0.00018 32.3 16.1 111 84-197 53-179 (297)
138 3mbr_X Glutamine cyclotransfer 91.0 5.9 0.0002 32.7 17.6 113 76-194 10-129 (243)
139 1xip_A Nucleoporin NUP159; bet 90.9 7.7 0.00026 34.0 17.0 146 13-195 42-188 (388)
140 2hes_X YDR267CP; beta-propelle 90.4 6.3 0.00022 32.2 18.8 113 83-197 196-327 (330)
141 2hqs_A Protein TOLB; TOLB, PAL 90.4 7.8 0.00027 33.1 16.8 88 103-195 203-297 (415)
142 3nol_A Glutamine cyclotransfer 89.7 8.1 0.00028 32.3 15.8 159 3-164 33-209 (262)
143 3nok_A Glutaminyl cyclase; bet 89.4 8.8 0.0003 32.3 16.9 154 4-161 46-215 (268)
144 3vgz_A Uncharacterized protein 89.3 7.3 0.00025 31.2 13.8 119 76-195 80-212 (353)
145 2fp8_A Strictosidine synthase; 89.0 8.2 0.00028 31.4 17.4 96 96-196 198-311 (322)
146 1jmx_B Amine dehydrogenase; ox 88.7 7.8 0.00027 30.8 14.3 60 94-157 266-326 (349)
147 3fvz_A Peptidyl-glycine alpha- 87.9 7.7 0.00026 31.8 11.8 90 103-194 69-171 (329)
148 3g4e_A Regucalcin; six bladed 87.7 9.7 0.00033 30.6 20.6 173 8-186 51-260 (297)
149 4a2l_A BT_4663, two-component 87.4 18 0.00063 33.5 19.3 170 11-187 88-282 (795)
150 2hqs_A Protein TOLB; TOLB, PAL 87.3 13 0.00044 31.7 14.7 106 84-195 266-384 (415)
151 3mbr_X Glutamine cyclotransfer 86.7 12 0.00042 30.8 21.3 140 20-162 30-185 (243)
152 3hfq_A Uncharacterized protein 86.6 11 0.00039 30.3 15.6 86 94-179 250-342 (347)
153 3nol_A Glutamine cyclotransfer 86.5 13 0.00045 31.0 15.3 113 75-193 31-150 (262)
154 2ojh_A Uncharacterized protein 85.8 10 0.00034 28.9 13.1 97 96-196 55-158 (297)
155 2qc5_A Streptogramin B lactona 85.3 11 0.00039 29.2 17.2 167 11-187 104-290 (300)
156 1rwi_B Serine/threonine-protei 85.3 11 0.00038 29.0 14.8 173 12-194 25-218 (270)
157 2oaj_A Protein SNI1; WD40 repe 85.3 11 0.00039 36.0 12.9 109 82-197 15-128 (902)
158 1pby_B Quinohemoprotein amine 84.9 13 0.00043 29.3 16.2 86 104-196 220-308 (337)
159 3fm0_A Protein CIAO1; WDR39,SG 83.5 17 0.00058 29.7 21.9 114 84-197 150-282 (345)
160 2qc5_A Streptogramin B lactona 83.5 14 0.00047 28.7 20.1 175 10-194 19-214 (300)
161 3hxj_A Pyrrolo-quinoline quino 83.1 16 0.00053 29.0 12.0 123 14-150 63-200 (330)
162 3u4y_A Uncharacterized protein 82.7 16 0.00056 28.9 19.0 104 89-196 90-205 (331)
163 2p4o_A Hypothetical protein; p 82.2 18 0.00063 29.2 12.4 98 94-195 42-144 (306)
164 2z2n_A Virginiamycin B lyase; 81.6 16 0.00056 28.2 19.0 174 11-194 15-209 (299)
165 2oit_A Nucleoporin 214KDA; NH2 81.1 26 0.00089 30.2 14.7 96 84-183 149-255 (434)
166 1pjx_A Dfpase, DIISOPROPYLFLUO 81.0 18 0.00063 28.4 18.2 99 96-197 189-298 (314)
167 3hxj_A Pyrrolo-quinoline quino 80.8 19 0.00066 28.5 12.6 161 19-195 106-281 (330)
168 3no2_A Uncharacterized protein 80.5 21 0.00073 28.8 12.2 97 95-197 5-105 (276)
169 3ott_A Two-component system se 80.0 37 0.0013 31.3 16.2 145 13-165 105-269 (758)
170 3hrp_A Uncharacterized protein 79.8 28 0.00097 29.8 17.6 107 89-197 225-351 (409)
171 3nok_A Glutaminyl cyclase; bet 79.3 27 0.00092 29.3 15.1 112 76-194 44-160 (268)
172 2w18_A PALB2, fancn, partner a 79.0 32 0.0011 30.0 21.9 60 135-196 295-355 (356)
173 2ecf_A Dipeptidyl peptidase IV 78.8 37 0.0013 30.6 16.3 94 104-197 264-366 (741)
174 3q7m_A Lipoprotein YFGL, BAMB; 78.7 26 0.00089 28.8 17.7 95 94-195 239-334 (376)
175 1xip_A Nucleoporin NUP159; bet 78.1 23 0.00078 30.9 11.2 103 87-197 42-154 (388)
176 1npe_A Nidogen, entactin; glyc 78.0 23 0.00078 27.7 15.0 94 91-190 130-229 (267)
177 1nir_A Nitrite reductase; hemo 75.0 32 0.0011 30.7 11.6 103 85-194 140-253 (543)
178 3bg1_A Protein SEC13 homolog; 72.7 35 0.0012 27.3 13.3 111 84-196 13-134 (316)
179 3u4y_A Uncharacterized protein 72.3 34 0.0012 27.0 16.4 172 16-197 91-303 (331)
180 4a2l_A BT_4663, two-component 72.2 62 0.0021 29.9 17.9 145 13-162 45-208 (795)
181 2vpj_A Kelch-like protein 12; 71.9 36 0.0012 27.0 15.6 158 14-178 106-300 (301)
182 3hrp_A Uncharacterized protein 71.8 21 0.00072 30.7 9.2 100 94-195 141-246 (409)
183 3ii7_A Kelch-like protein 7; p 71.5 34 0.0012 27.3 10.0 82 103-185 70-156 (306)
184 2vpj_A Kelch-like protein 12; 70.3 39 0.0013 26.8 18.1 165 14-185 56-260 (301)
185 2ojh_A Uncharacterized protein 68.9 35 0.0012 25.8 15.8 62 134-197 139-203 (297)
186 3m0c_C LDL receptor, low-densi 68.0 86 0.0029 29.9 17.7 97 90-190 521-623 (791)
187 1jof_A Carboxy-CIS,CIS-muconat 67.3 46 0.0016 27.3 10.1 73 104-178 283-365 (365)
188 1ijq_A LDL receptor, low-densi 66.9 51 0.0017 26.9 19.4 159 22-190 3-186 (316)
189 1jmx_B Amine dehydrogenase; ox 65.6 47 0.0016 26.1 10.4 66 94-160 10-78 (349)
190 2iwa_A Glutamine cyclotransfer 65.5 56 0.0019 26.9 17.7 193 3-198 11-237 (266)
191 2j04_A TAU60, YPL007P, hypothe 62.9 75 0.0026 29.6 11.4 57 85-142 227-286 (588)
192 2iwa_A Glutamine cyclotransfer 62.4 65 0.0022 26.5 18.1 95 95-194 32-131 (266)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 62.2 54 0.0018 25.5 12.5 84 101-187 44-135 (314)
194 2qe8_A Uncharacterized protein 61.8 33 0.0011 28.1 8.2 51 136-187 259-309 (343)
195 3p5b_L Low density lipoprotein 60.0 81 0.0028 26.9 17.0 97 90-190 209-311 (400)
196 3ott_A Two-component system se 59.4 1.1E+02 0.0037 28.1 20.2 140 13-162 65-226 (758)
197 2oit_A Nucleoporin 214KDA; NH2 59.1 86 0.0029 26.9 12.3 110 83-195 91-220 (434)
198 3v65_B Low-density lipoprotein 57.8 86 0.0029 26.5 19.1 161 20-190 87-268 (386)
199 2xn4_A Kelch-like protein 2; s 57.8 69 0.0024 25.4 15.5 165 14-185 55-258 (302)
200 4asc_A Kelch repeat and BTB do 57.5 52 0.0018 26.4 8.5 94 90-184 94-202 (315)
201 2woz_A Kelch repeat and BTB do 57.3 63 0.0022 25.9 9.0 80 104-184 128-212 (318)
202 2p9w_A MAL S 1 allergenic prot 56.7 85 0.0029 27.0 10.0 92 103-195 100-212 (334)
203 1zgk_A Kelch-like ECH-associat 56.3 75 0.0026 25.4 14.9 155 14-175 115-306 (308)
204 1jof_A Carboxy-CIS,CIS-muconat 56.0 82 0.0028 25.7 14.0 104 94-197 155-290 (365)
205 3v65_B Low-density lipoprotein 55.4 94 0.0032 26.2 17.6 101 91-197 210-315 (386)
206 3v9f_A Two-component system se 54.9 1.3E+02 0.0044 27.6 19.1 149 11-163 258-443 (781)
207 3fvz_A Peptidyl-glycine alpha- 53.8 85 0.0029 25.2 20.7 104 94-197 207-321 (329)
208 2xn4_A Kelch-like protein 2; s 52.4 85 0.0029 24.8 13.6 96 89-185 103-211 (302)
209 3v64_C Agrin; beta propeller, 52.4 1E+02 0.0034 25.6 16.4 61 127-190 204-266 (349)
210 1k3i_A Galactose oxidase precu 51.7 1.4E+02 0.0047 27.0 11.2 97 92-189 408-533 (656)
211 4gq1_A NUP37; propeller, trans 50.8 1.1E+02 0.0036 25.4 17.7 180 5-196 10-216 (393)
212 3sov_A LRP-6, low-density lipo 50.6 1E+02 0.0036 25.3 18.3 101 90-196 129-234 (318)
213 2dg1_A DRP35, lactonase; beta 49.4 95 0.0033 24.5 13.3 92 94-187 55-153 (333)
214 3e5z_A Putative gluconolactona 48.3 95 0.0033 24.2 16.0 96 94-196 182-284 (296)
215 4hw6_A Hypothetical protein, I 47.4 1.4E+02 0.0047 25.8 15.4 172 12-190 140-365 (433)
216 3ii7_A Kelch-like protein 7; p 46.6 1.1E+02 0.0036 24.2 16.5 165 14-185 49-254 (306)
217 1zgk_A Kelch-like ECH-associat 46.1 1.1E+02 0.0038 24.3 14.1 96 89-185 163-269 (308)
218 3e5z_A Putative gluconolactona 45.6 1.1E+02 0.0036 23.9 12.6 17 23-39 43-60 (296)
219 3azo_A Aminopeptidase; POP fam 44.7 1.1E+02 0.0038 27.0 9.2 91 103-196 217-321 (662)
220 2ghs_A AGR_C_1268P; regucalcin 42.7 1.3E+02 0.0045 24.2 16.3 111 83-197 88-209 (326)
221 3sov_A LRP-6, low-density lipo 42.7 1.4E+02 0.0048 24.5 18.9 162 21-190 5-188 (318)
222 3p5b_L Low density lipoprotein 42.0 1.6E+02 0.0055 25.0 18.3 161 20-190 83-268 (400)
223 2j04_A TAU60, YPL007P, hypothe 40.1 2.3E+02 0.0079 26.3 12.5 108 84-196 85-209 (588)
224 1n7d_A LDL receptor, low-densi 39.4 72 0.0024 29.7 7.3 61 128-190 542-605 (699)
225 3o4h_A Acylamino-acid-releasin 37.6 58 0.002 28.5 6.1 64 94-160 160-231 (582)
226 1nir_A Nitrite reductase; hemo 37.1 2.2E+02 0.0075 25.1 19.0 69 91-162 288-361 (543)
227 3v64_C Agrin; beta propeller, 36.9 1.8E+02 0.0061 24.0 18.7 161 20-190 44-225 (349)
228 3dr2_A Exported gluconolactona 36.1 1.6E+02 0.0054 23.2 10.5 100 94-197 96-223 (305)
229 2ecf_A Dipeptidyl peptidase IV 35.9 2.4E+02 0.0081 25.2 15.0 23 94-116 162-185 (741)
230 1k3i_A Galactose oxidase precu 35.9 2E+02 0.0068 26.0 9.6 81 104-185 220-305 (656)
231 3m0c_C LDL receptor, low-densi 33.1 3.2E+02 0.011 25.9 19.7 161 20-190 395-580 (791)
232 1n7d_A LDL receptor, low-densi 32.7 2.1E+02 0.0072 26.4 9.4 69 89-158 546-616 (699)
233 1ijq_A LDL receptor, low-densi 32.7 2E+02 0.0067 23.2 19.0 101 92-197 129-235 (316)
234 2uvk_A YJHT; unknown function, 32.2 2E+02 0.0068 23.2 10.8 50 147-196 168-224 (357)
235 2oiz_A Aromatic amine dehydrog 30.1 2.3E+02 0.0078 23.2 10.8 72 88-164 259-342 (361)
236 3tc9_A Hypothetical hydrolase; 28.0 2.8E+02 0.0097 23.6 17.0 69 90-159 233-306 (430)
237 2fp8_A Strictosidine synthase; 27.9 2.3E+02 0.0077 22.5 13.1 60 127-188 81-146 (322)
238 2ghs_A AGR_C_1268P; regucalcin 27.7 2.4E+02 0.0081 22.6 22.6 172 9-186 88-290 (326)
239 3tc9_A Hypothetical hydrolase; 27.0 3E+02 0.01 23.5 11.9 60 94-156 149-214 (430)
240 2dg1_A DRP35, lactonase; beta 27.0 2.3E+02 0.0077 22.2 16.1 110 85-196 87-211 (333)
241 3o4h_A Acylamino-acid-releasin 26.3 3.2E+02 0.011 23.6 20.6 89 101-194 130-223 (582)
242 2woz_A Kelch repeat and BTB do 25.1 2.6E+02 0.0087 22.1 10.3 80 104-184 79-164 (318)
243 3pe7_A Oligogalacturonate lyas 22.7 2.9E+02 0.0099 21.9 9.5 76 103-179 168-248 (388)
244 1z68_A Fibroblast activation p 22.4 3E+02 0.01 24.4 8.2 27 15-41 66-102 (719)
245 2p9w_A MAL S 1 allergenic prot 21.5 3.8E+02 0.013 22.8 14.5 54 132-186 242-303 (334)
246 1k32_A Tricorn protease; prote 21.4 4.8E+02 0.016 24.8 9.8 95 96-196 310-407 (1045)
247 1k32_A Tricorn protease; prote 20.9 5.4E+02 0.018 24.4 11.8 87 95-186 25-125 (1045)
248 4asc_A Kelch repeat and BTB do 20.6 3.2E+02 0.011 21.5 15.7 95 89-184 143-249 (315)
249 2z3z_A Dipeptidyl aminopeptida 20.2 4.5E+02 0.015 23.1 13.5 95 89-184 127-274 (706)
250 4hw6_A Hypothetical protein, I 20.1 3.1E+02 0.011 23.5 7.5 55 135-190 239-295 (433)
No 1
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=99.96 E-value=2.2e-28 Score=244.36 Aligned_cols=127 Identities=27% Similarity=0.445 Sum_probs=116.6
Q ss_pred CCeeeEEEeeccCCcceEEccccCeEEEEeCCEEEEEEcCCcceeeeeeccCc-CceEEEEEEeCCEEEEEeccccEEEE
Q psy17021 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHL-PNLIVKIESMGHRIYVSDVQESVFLV 150 (199)
Q Consensus 72 gdklesVh~~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~-~~~i~~l~~~~~~IlVGD~~~Sv~ll 150 (199)
+.+++.+|.++++|+|+|+++|+|+||||+|++|++|+|+++++++ ++...+ +..++++++.+|+|+|||+|+||+|+
T Consensus 873 ~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~ 951 (1158)
T 3ei3_A 873 DGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFILVGDLMRSVLLL 951 (1158)
T ss_dssp TTEEEEEEEEEESSCEEEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEEECCCSCEEEEEEETTEEEEEESSBCEEEE
T ss_pred CCEEEEEEEEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEeeccccEEEEEEeccCCEEEEEEhhheEEEE
Confidence 5699999999999999999999999999999999999999887666 333212 23477999999999999999999999
Q ss_pred EEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeecCC
Q psy17021 151 RYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199 (199)
Q Consensus 151 ~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~~~ 199 (199)
+|++++++|+++|||+.|+|+||+++||++++++||++|||+++|+||+
T Consensus 952 ~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 952 AYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp EEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECTT
T ss_pred EEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCCC
Confidence 9999999999999999999999999999999999999999999999985
No 2
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=99.55 E-value=1e-13 Score=138.76 Aligned_cols=163 Identities=18% Similarity=0.211 Sum_probs=118.2
Q ss_pred CceeEEecCCCcceeecccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEe
Q psy17021 1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHK 80 (199)
Q Consensus 1 l~~~h~t~~~~~~~~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~ 80 (199)
|+++|+|+++++|+|+++|+||||||+|+.+++||+|+|++|| ++++. .|. + ++....+.++||++||.++|+++
T Consensus 876 L~lv~~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~~-~~~-i--~~~~l~~~~~~I~vgD~~~Sv~~ 950 (1158)
T 3ei3_A 876 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNH-YNN-I--MALYLKTKGDFILVGDLMRSVLL 950 (1158)
T ss_dssp EEEEEEEEESSCEEEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEEE-CCC-S--CEEEEEEETTEEEEEESSBCEEE
T ss_pred EEEEEEEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEeec-ccc-E--EEEEEeccCCEEEEEEhhheEEE
Confidence 5899999999999999999999999999999999999999999 77763 443 2 22233344699999999999999
Q ss_pred eccCCcceEEccccCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEEEEeCCC---
Q psy17021 81 TSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLVRYKRYE--- 156 (199)
Q Consensus 81 ~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll~y~~~~--- 156 (199)
..|+.. ..+|...|.-. .+..+++... ..+.+++||....+.+++|+++.
T Consensus 951 ~~y~~~-------------------------~~~L~~~a~D~-~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~~~~~ 1004 (1158)
T 3ei3_A 951 LAYKPM-------------------------EGNFEEIARDF-NPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTD 1004 (1158)
T ss_dssp EEEETT-------------------------TTEEEEEEECC-SCBCEEEEEEEETTEEEEEETTSEEEEEEECTTCCST
T ss_pred EEEEcC-------------------------CCeEEEEEeec-ccccEEEEEEEccCcEEEEcCCCcEEEEecCCCCCCc
Confidence 876643 23343334332 3556666665 36899999999999999998742
Q ss_pred ---CeEEEEeccCCceeEEEEEE--Ee-----------CCeEEEEcCCCcEEEE
Q psy17021 157 ---NQLLIFADDTQPRWITTSCV--LD-----------YNTVASADKFGNVCIV 194 (199)
Q Consensus 157 ---~~l~~varD~~~~wvta~~~--Ld-----------~~t~l~aD~~gNl~vl 194 (199)
.+|...|.=+..--+++... |. .+.++.+=.+|.|.++
T Consensus 1005 ~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 1005 EERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp TGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred cccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 46666654444444555542 11 1246777778887766
No 3
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.87 E-value=0.0017 Score=56.11 Aligned_cols=175 Identities=13% Similarity=0.148 Sum_probs=108.5
Q ss_pred CcceeecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-----------eeEE
Q psy17021 11 EVPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-----------MEFV 78 (199)
Q Consensus 11 ~~~~~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-----------lesV 78 (199)
..+.++..-.+.+++|.. +.+++||+...+.++.-... ...+ .-..+.+..+++|.. .+.+
T Consensus 200 ~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~---~~~v----~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 272 (445)
T 2ovr_B 200 STVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGH---VAAV----RCVQYDGRRVVSGAYDFMVKVWDPETETCL 272 (445)
T ss_dssp SCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECC---SSCE----EEEEECSSCEEEEETTSCEEEEEGGGTEEE
T ss_pred CcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCC---cccE----EEEEECCCEEEEEcCCCEEEEEECCCCcEe
Confidence 344555555566666654 78999999876655432211 1222 223334555655421 1222
Q ss_pred Eee-ccCCcceEEccccCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCC
Q psy17021 79 HKT-SVDEVPYAMCPFQGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRY 155 (199)
Q Consensus 79 h~~-~~kG~v~aL~~f~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~ 155 (199)
... ...++++++.. +|. +++| ..+++++|++...+.+..... ....+..+...++++++|..-..+.++..+.
T Consensus 273 ~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~- 348 (445)
T 2ovr_B 273 HTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTG--HQSLTSGMELKDNILVSGNADSTVKIWDIKT- 348 (445)
T ss_dssp EEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECC--CCSCEEEEEEETTEEEEEETTSCEEEEETTT-
T ss_pred EEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcC--CcccEEEEEEeCCEEEEEeCCCeEEEEECCC-
Confidence 222 24567888776 664 4443 368999999987765443222 2345778888899999999888888876532
Q ss_pred CCeEEEEec-cCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 156 ENQLLIFAD-DTQPRWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 156 ~~~l~~var-D~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
...+..+.. ......++++.+ +.+.++.+..+|.+.++...
T Consensus 349 ~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 349 GQCLQTLQGPNKHQSAVTCLQF-NKNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp CCEEEEECSTTSCSSCEEEEEE-CSSEEEEEETTSEEEEEETT
T ss_pred CcEEEEEccCCCCCCCEEEEEE-CCCEEEEEeCCCeEEEEECC
Confidence 233344432 235667888887 77889999999999998654
No 4
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.74 E-value=0.0095 Score=51.39 Aligned_cols=176 Identities=9% Similarity=0.047 Sum_probs=104.7
Q ss_pred CCcceeecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-----------eeE
Q psy17021 10 DEVPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-----------MEF 77 (199)
Q Consensus 10 ~~~~~~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-----------les 77 (199)
...+.++..-...+++|.. +.+++||+...+.++.-... ... + .-..+.++.+++|.. .+.
T Consensus 133 ~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h---~~~---v-~~l~~~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 133 SKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGH---TGS---V-LCLQYDERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCC---SSC---E-EEEECCSSEEEEEETTSCEEEEESSSCCE
T ss_pred CCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCC---CCc---E-EEEEECCCEEEEEcCCCeEEEEECCCCcE
Confidence 3456777665556666554 78999998776554432211 122 2 223334455555321 111
Q ss_pred EE-eeccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceee-eeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeC
Q psy17021 78 VH-KTSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLR-KCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKR 154 (199)
Q Consensus 78 Vh-~~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~-~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~ 154 (199)
++ ...-.+++.++..-.+.+++|- .++|++|++...+... ..........+.++...++++++|..-..+.++..
T Consensus 206 ~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~-- 283 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT-- 283 (435)
T ss_dssp EEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEET--
T ss_pred EEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEEC--
Confidence 21 2234567777765445555443 6899999997654322 11222123357788888999999998888877653
Q ss_pred CCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021 155 YENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVST 196 (199)
Q Consensus 155 ~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~ 196 (199)
..++....-. .....++++.+ +.+.++.+..+|.+.++..
T Consensus 284 ~~~~~~~~~~-~~~~~v~~~~~-~~~~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 284 STCEFVRTLN-GHKRGIACLQY-RDRLVVSGSSDNTIRLWDI 323 (435)
T ss_dssp TTCCEEEEEE-CCSSCEEEEEE-ETTEEEEEETTSCEEEEET
T ss_pred CcCcEEEEEc-CCCCcEEEEEe-CCCEEEEEeCCCeEEEEEC
Confidence 3333322222 23456777777 7888999999999988764
No 5
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.70 E-value=0.0029 Score=54.58 Aligned_cols=180 Identities=10% Similarity=0.084 Sum_probs=105.5
Q ss_pred CcceeecccCCE-EEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-----------eeE
Q psy17021 11 EVPYAMCPFQGA-LLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-----------MEF 77 (199)
Q Consensus 11 ~~~~~~~~f~~~-ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-----------les 77 (199)
..+.++.. .|. +++|.. +.+++||+...+.++.-... +.. + .-..+.+..+++|.. .+.
T Consensus 240 ~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~---v-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 240 AAVRCVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQGH---TNR---V-YSLQFDGIHVVSGSLDTSIRVWDVETGNC 311 (445)
T ss_dssp SCEEEEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECCC---SSC---E-EEEEECSSEEEEEETTSCEEEEETTTCCE
T ss_pred ccEEEEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecCC---CCc---e-EEEEECCCEEEEEeCCCeEEEEECCCCCE
Confidence 34445444 554 444443 78999998776665543221 122 2 223334455555421 122
Q ss_pred EE-eeccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeeecc-CcCceEEEEEEeCCEEEEEeccccEEEEEEeC
Q psy17021 78 VH-KTSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENK-HLPNLIVKIESMGHRIYVSDVQESVFLVRYKR 154 (199)
Q Consensus 78 Vh-~~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~-~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~ 154 (199)
+. .....+.+.++.+-.+.+++|- +++|++|++...+.+..-... .....+.++...++++++|..-..|.++....
T Consensus 312 ~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 312 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp EEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred EEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCC
Confidence 22 2233456667665444555444 688999999776654433221 12345888888899999999888888876543
Q ss_pred CCCeEEEE---eccCCceeEEEEEEEeCC-eEEEEcCCCc----EEEEeecCC
Q psy17021 155 YENQLLIF---ADDTQPRWITTSCVLDYN-TVASADKFGN----VCIVSTYRE 199 (199)
Q Consensus 155 ~~~~l~~v---arD~~~~wvta~~~Ld~~-t~l~aD~~gN----l~vlr~~~~ 199 (199)
...+..+ ........++++.+-.+. .++.+..+|+ ++++...+|
T Consensus 392 -~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 392 -GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp -CCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred -CceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 2233333 223455678888886554 4577788887 888876653
No 6
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.64 E-value=0.0066 Score=52.37 Aligned_cols=171 Identities=8% Similarity=0.084 Sum_probs=104.7
Q ss_pred CcceeecccCCEE-EEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe--------------
Q psy17021 11 EVPYAMCPFQGAL-LVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-------------- 74 (199)
Q Consensus 11 ~~~~~~~~f~~~l-l~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-------------- 74 (199)
..+.++.. .|.+ ++|-. +.+++||+...+.++.-... .. .+.-..+.++.+++|..
T Consensus 174 ~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h---~~----~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~ 245 (435)
T 1p22_A 174 GSVLCLQY-DERVIITGSSDSTVRVWDVNTGEMLNTLIHH---CE----AVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 245 (435)
T ss_dssp SCEEEEEC-CSSEEEEEETTSCEEEEESSSCCEEEEECCC---CS----CEEEEECCTTEEEEEETTSCEEEEECSSSSC
T ss_pred CcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC---CC----cEEEEEEcCCEEEEeeCCCcEEEEeCCCCCC
Confidence 34566655 5554 44443 78999999776655432211 11 12223333444544321
Q ss_pred eeE-EEeeccCCcceEEccccCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEE
Q psy17021 75 MEF-VHKTSVDEVPYAMCPFQGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVR 151 (199)
Q Consensus 75 les-Vh~~~~kG~v~aL~~f~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~ 151 (199)
... -......++++++.. +|. +++|- .++|++|++...+.+..... ....+.++...++++++|..-..|.++.
T Consensus 246 ~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~g~~dg~i~iwd 322 (435)
T 1p22_A 246 ITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFVRTLNG--HKRGIACLQYRDRLVVSGSSDNTIRLWD 322 (435)
T ss_dssp CEEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred ceeeeEecCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcEEEEEcC--CCCcEEEEEeCCCEEEEEeCCCeEEEEE
Confidence 111 222344567888776 554 44443 68999999987765544322 2234777777899999999888888876
Q ss_pred EeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021 152 YKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVST 196 (199)
Q Consensus 152 y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~ 196 (199)
... ...+..+. .....++++.+ |.+.++.+..+|.+.++.+
T Consensus 323 ~~~-~~~~~~~~--~h~~~v~~~~~-~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 323 IEC-GACLRVLE--GHEELVRCIRF-DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp TTT-CCEEEEEC--CCSSCEEEEEC-CSSEEEEEETTSCEEEEEH
T ss_pred CCC-CCEEEEEe--CCcCcEEEEEe-cCCEEEEEeCCCcEEEEEC
Confidence 532 22333332 24567888888 8889999999999998864
No 7
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.018 Score=46.01 Aligned_cols=107 Identities=8% Similarity=0.125 Sum_probs=72.2
Q ss_pred ccCCcceEEccccCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeCCC
Q psy17021 82 SVDEVPYAMCPFQGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 82 ~~kG~v~aL~~f~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
...+++.++.. ++. +++|- ++.+++|+. .+........ ...+.++.. .++++++|..-..+.++. .
T Consensus 102 ~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d~--~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d----~ 172 (313)
T 3odt_A 102 GHQGNVCSLSF-QDGVVISGSWDKTAKVWKE--GSLVYNLQAH--NASVWDAKVVSFSENKFLTASADKTIKLWQ----N 172 (313)
T ss_dssp CCSSCEEEEEE-ETTEEEEEETTSEEEEEET--TEEEEEEECC--SSCEEEEEEEETTTTEEEEEETTSCEEEEE----T
T ss_pred hcccCEEEEEe-cCCEEEEEeCCCCEEEEcC--CcEEEecccC--CCceeEEEEccCCCCEEEEEECCCCEEEEe----c
Confidence 35567788776 554 44333 689999992 2222222211 223444443 588999999988888875 3
Q ss_pred CeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 157 NQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 157 ~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
.+....-.......++++.+..++.++.+..++.+.++...
T Consensus 173 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~ 213 (313)
T 3odt_A 173 DKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMH 213 (313)
T ss_dssp TEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETT
T ss_pred CceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECC
Confidence 44445555557778999999988889999999999988654
No 8
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.48 E-value=0.041 Score=47.26 Aligned_cols=173 Identities=10% Similarity=0.014 Sum_probs=95.6
Q ss_pred cceeecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEECC-----------eeeEE
Q psy17021 12 VPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVGN-----------AMEFV 78 (199)
Q Consensus 12 ~~~~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vgd-----------klesV 78 (199)
.+.++.+-...+++|.. +.+++||+...+.++.-... ...+ ....-. .+..+++|. .-+.+
T Consensus 272 ~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~---~~~v---~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 272 SVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH---TDRI---YSTIYDHERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC---SSCE---EEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---CCCE---EEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 34455555566776664 78999999876665432211 1112 122111 122333321 12222
Q ss_pred Eee-ccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCC
Q psy17021 79 HKT-SVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 79 h~~-~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
... .-.+++.++..-.+.|++|- .++|++|++...+........ ....+..+...++++++|. -..+.+ |+...
T Consensus 346 ~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-dg~i~i--wd~~~ 421 (464)
T 3v7d_B 346 YTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHT-NLSAITTFYVSDNILVSGS-ENQFNI--YNLRS 421 (464)
T ss_dssp EEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEECT-TCCCEEEEEECSSEEEEEE-TTEEEE--EETTT
T ss_pred EEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeecCC-CCccEEEEEeCCCEEEEec-CCeEEE--EECCC
Confidence 222 34567777664333455443 679999999876543333332 3455777888899999998 445544 45556
Q ss_pred CeEEEEeccCCceeEEEEEEEeCC-eEEEEcCCCcEEEEe
Q psy17021 157 NQLLIFADDTQPRWITTSCVLDYN-TVASADKFGNVCIVS 195 (199)
Q Consensus 157 ~~l~~varD~~~~wvta~~~Ld~~-t~l~aD~~gNl~vlr 195 (199)
+++...-.-.....++++.+ +++ .+++++.+|..++.-
T Consensus 422 g~~~~~~~~~~~~~v~~v~~-~~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 422 GKLVHANILKDADQIWSVNF-KGKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp CCEEESCTTTTCSEEEEEEE-ETTEEEEEEEETTEEEEEE
T ss_pred CcEEehhhccCCCcEEEEEe-cCCEEEEEEEeCCeEEEEE
Confidence 66554212233567888888 455 455556666555443
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.40 E-value=0.0091 Score=50.67 Aligned_cols=111 Identities=9% Similarity=0.012 Sum_probs=71.0
Q ss_pred cCCcceEEc--cccCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--C-CEEEEEeccccEEEEEEeCC
Q psy17021 83 VDEVPYAMC--PFQGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--G-HRIYVSDVQESVFLVRYKRY 155 (199)
Q Consensus 83 ~kG~v~aL~--~f~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~-~~IlVGD~~~Sv~ll~y~~~ 155 (199)
.++.++++. |-.+.++|+ ...+|++|++...+.++.-.. ....+.++... + .+++.|..-.+|.++ +.+
T Consensus 225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~--~~~~v~~l~~sp~~~~~lasgs~D~~i~iw--d~~ 300 (357)
T 4g56_B 225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV--HSQNITGLAYSYHSSPFLASISEDCTVAVL--DAD 300 (357)
T ss_dssp CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC--CSSCEEEEEECSSSSCCEEEEETTSCEEEE--CTT
T ss_pred ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec--cceeEEEEEEcCCCCCEEEEEeCCCEEEEE--ECC
Confidence 345566654 445666543 357899999987765443222 12346777653 3 467778766677665 555
Q ss_pred CCeEEEEeccCCceeEEEEEEE--eCCeEEEEcCCCcEEEEeecCC
Q psy17021 156 ENQLLIFADDTQPRWITTSCVL--DYNTVASADKFGNVCIVSTYRE 199 (199)
Q Consensus 156 ~~~l~~varD~~~~wvta~~~L--d~~t~l~aD~~gNl~vlr~~~~ 199 (199)
.+++...- -...+|++++|= |...++.+-.+|.+.+..+|.+
T Consensus 301 ~~~~~~~~--~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 301 FSEVFRDL--SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SCEEEEEC--CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCcEeEEC--CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 55554432 345689999984 5667888889999999988753
No 10
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.39 E-value=0.04 Score=45.08 Aligned_cols=118 Identities=4% Similarity=-0.011 Sum_probs=74.7
Q ss_pred eeccCCcceEEcccc--------------CeEE-EEe-CCEEEEEEcCCcc--eeeeeeccCcCceEEEEEEe-----CC
Q psy17021 80 KTSVDEVPYAMCPFQ--------------GALL-VGV-GRYLRLYDLGKKK--LLRKCENKHLPNLIVKIESM-----GH 136 (199)
Q Consensus 80 ~~~~kG~v~aL~~f~--------------g~LL-aav-g~~v~vy~l~~~~--Ll~~~~~~~~~~~i~~l~~~-----~~ 136 (199)
.....++++++.--. +..+ +|- ...|++|++...+ .............+.++.-. ++
T Consensus 143 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~ 222 (379)
T 3jrp_A 143 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 222 (379)
T ss_dssp EECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC
Confidence 334456666665443 5544 333 6789999995432 11112222122346666654 67
Q ss_pred EEEEEeccccEEEEEEeCCCC--eEEEEeccCCceeEEEEEEEeC-CeEEEEcCCCcEEEEeec
Q psy17021 137 RIYVSDVQESVFLVRYKRYEN--QLLIFADDTQPRWITTSCVLDY-NTVASADKFGNVCIVSTY 197 (199)
Q Consensus 137 ~IlVGD~~~Sv~ll~y~~~~~--~l~~varD~~~~wvta~~~Ld~-~t~l~aD~~gNl~vlr~~ 197 (199)
+++.|+.-..+.++..+.... ..........+..++++.+-.+ ..++.+..+|.+.++++.
T Consensus 223 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 223 YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 899999999999988765432 3344444446778899988744 467777889999999875
No 11
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.37 E-value=0.031 Score=45.42 Aligned_cols=118 Identities=8% Similarity=0.022 Sum_probs=78.6
Q ss_pred eEEEeeccCCcceEEcc---ccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEE
Q psy17021 76 EFVHKTSVDEVPYAMCP---FQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLV 150 (199)
Q Consensus 76 esVh~~~~kG~v~aL~~---f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll 150 (199)
+.+.....+++++++.- -+|.++++. .+.|++|++...+.+..... +..+..+....+.++++..-.++.++
T Consensus 119 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~ 195 (368)
T 3mmy_A 119 QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL---PERCYCADVIYPMAVVATAERGLIVY 195 (368)
T ss_dssp EEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEEC---SSCEEEEEEETTEEEEEEGGGCEEEE
T ss_pred CceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEec---CCCceEEEecCCeeEEEeCCCcEEEE
Confidence 34445567788888873 355544333 68999999987765444332 34577778889999999999999988
Q ss_pred EEeCCCCeEEEEeccCCceeEEEEEEEeC-C----eEEEEcCCCcEEEEeec
Q psy17021 151 RYKRYENQLLIFADDTQPRWITTSCVLDY-N----TVASADKFGNVCIVSTY 197 (199)
Q Consensus 151 ~y~~~~~~l~~varD~~~~wvta~~~Ld~-~----t~l~aD~~gNl~vlr~~ 197 (199)
..+.....+..+. ........++.+... . .++.+..+|.+.++.+.
T Consensus 196 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~ 246 (368)
T 3mmy_A 196 QLENQPSEFRRIE-SPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN 246 (368)
T ss_dssp ECSSSCEEEEECC-CSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS
T ss_pred Eeccccchhhhcc-ccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC
Confidence 8765444444333 333444555555532 2 28999999998888654
No 12
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.37 E-value=0.02 Score=46.75 Aligned_cols=115 Identities=5% Similarity=-0.007 Sum_probs=71.3
Q ss_pred cCCcceEEccccCeEEEE-eCCEEEEEEcCCcce--------------eeeeeccCcCceEEEEEEe--CCEEEEEeccc
Q psy17021 83 VDEVPYAMCPFQGALLVG-VGRYLRLYDLGKKKL--------------LRKCENKHLPNLIVKIESM--GHRIYVSDVQE 145 (199)
Q Consensus 83 ~kG~v~aL~~f~g~LLaa-vg~~v~vy~l~~~~L--------------l~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~ 145 (199)
..+++.++.--.+.++++ ..+.+++|++...+. +..-............... ++++++|+.-.
T Consensus 230 ~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg 309 (366)
T 3k26_A 230 HRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG 309 (366)
T ss_dssp CSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS
T ss_pred CcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC
Confidence 556677766443344433 368999999965421 1111111111222333445 78999999888
Q ss_pred cEEEEEEeCCC---CeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 146 SVFLVRYKRYE---NQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 146 Sv~ll~y~~~~---~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
+|.++..+..+ .....+..+.....++++.+- |...++.+..+|.+.++.+.
T Consensus 310 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 310 KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99888775432 234445444446789999988 45578889999999988753
No 13
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.34 E-value=0.028 Score=44.85 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=74.0
Q ss_pred cCCcceEEcccc-CeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeC-CEEEEEeccccEEEEEEeCCCCeE
Q psy17021 83 VDEVPYAMCPFQ-GALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG-HRIYVSDVQESVFLVRYKRYENQL 159 (199)
Q Consensus 83 ~kG~v~aL~~f~-g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~-~~IlVGD~~~Sv~ll~y~~~~~~l 159 (199)
.++++.++.--. +.++++- ++.+++|++...+.+..-.. ....+.++.... +++++|..-..|.++.. ..++.
T Consensus 183 ~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~--~~~~~ 258 (313)
T 3odt_A 183 HNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEG--HESFVYCIKLLPNGDIVSCGEDRTVRIWSK--ENGSL 258 (313)
T ss_dssp CSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECTTSCEEEEETTSEEEEECT--TTCCE
T ss_pred CcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhc--CCceEEEEEEecCCCEEEEecCCEEEEEEC--CCCce
Confidence 667777776554 4655444 67999999987765544322 223477777643 37888888778777654 34443
Q ss_pred EEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeecC
Q psy17021 160 LIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYR 198 (199)
Q Consensus 160 ~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~~ 198 (199)
...-.. ....++++.+-.++.++.+..+|.+.++.+..
T Consensus 259 ~~~~~~-~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 259 KQVITL-PAISIWSVDCMSNGDIIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EEEEEC-SSSCEEEEEECTTSCEEEEETTSCEEEEESCG
T ss_pred eEEEec-cCceEEEEEEccCCCEEEEeCCCcEEEEeCCC
Confidence 333322 23468888888777799999999999997653
No 14
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.33 E-value=0.01 Score=52.33 Aligned_cols=114 Identities=11% Similarity=0.036 Sum_probs=76.5
Q ss_pred cCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE------------eCCEEEEEeccccE
Q psy17021 83 VDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES------------MGHRIYVSDVQESV 147 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~------------~~~~IlVGD~~~Sv 147 (199)
..++++++.-- +|+.|+.. ..+|++|++...+++...... ....+.++.. .+.++++|+.-..|
T Consensus 487 ~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i 565 (615)
T 1pgu_A 487 LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF-RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 565 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC-CSSCEEEEEECCCC------CCSCCEEEEEETTSCE
T ss_pred ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC-CCCceeEEEEcCccccccccccCCCEEEEEcCCCcE
Confidence 35566665432 45554433 578999999877765542210 1223666664 67899999999999
Q ss_pred EEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeecCC
Q psy17021 148 FLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE 199 (199)
Q Consensus 148 ~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~~~ 199 (199)
.++..+.....+..+ ......++++.+..++.++.+..+|.+.+++++.|
T Consensus 566 ~iw~~~~~~~~~~~~--~~h~~~v~~l~~s~~~~l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 566 FIYSVKRPMKIIKAL--NAHKDGVNNLLWETPSTLVSSGADACIKRWNVVLE 615 (615)
T ss_dssp EEEESSCTTCCEEET--TSSTTCEEEEEEEETTEEEEEETTSCEEEEEEC--
T ss_pred EEEECCCCceechhh--hcCccceEEEEEcCCCCeEEecCCceEEEEeeecC
Confidence 998875433334333 22367899999997766888999999999998764
No 15
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.33 E-value=0.014 Score=48.63 Aligned_cols=170 Identities=12% Similarity=0.042 Sum_probs=98.4
Q ss_pred CCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEECC-----------eeeEEEe-eccCC
Q psy17021 20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVGN-----------AMEFVHK-TSVDE 85 (199)
Q Consensus 20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vgd-----------klesVh~-~~~kG 85 (199)
.+++++|.. +.+++||+...+.+++-... ...+ ..+.-. .+..++++. ..+.+.. ....+
T Consensus 217 ~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~---~~~i---~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 290 (425)
T 1r5m_A 217 DDKFVIPGPKGAIFVYQITEKTPTGKLIGH---HGPI---SVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQ 290 (425)
T ss_dssp TTEEEEECGGGCEEEEETTCSSCSEEECCC---SSCE---EEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSS
T ss_pred CCEEEEEcCCCeEEEEEcCCCceeeeeccC---CCce---EEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCc
Confidence 456666655 78999999876665443211 1212 122111 122333321 1111111 22456
Q ss_pred cceEEcccc-CeEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC----
Q psy17021 86 VPYAMCPFQ-GALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN---- 157 (199)
Q Consensus 86 ~v~aL~~f~-g~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~---- 157 (199)
++.++.--. |.++++ -.+.+++|++...+.+...... ...+.++.. .++++++|..-..+.++..+....
T Consensus 291 ~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~ 368 (425)
T 1r5m_A 291 SIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVD--GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRS 368 (425)
T ss_dssp CEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECT--TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----
T ss_pred cEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccC--CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceee
Confidence 677765543 355443 3689999999877654443322 234555554 478999999888898887754320
Q ss_pred --------------eEEEEeccCCce-eEEEEEEEeC-CeEEEEcCCCcEEEEeec
Q psy17021 158 --------------QLLIFADDTQPR-WITTSCVLDY-NTVASADKFGNVCIVSTY 197 (199)
Q Consensus 158 --------------~l~~varD~~~~-wvta~~~Ld~-~t~l~aD~~gNl~vlr~~ 197 (199)
.....-+..... .++++.+-.+ ..++.+..+|.+.++.++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 369 LYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ----------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred eecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 033333333333 8999999844 467789999999998875
No 16
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.32 E-value=0.018 Score=46.39 Aligned_cols=166 Identities=9% Similarity=0.098 Sum_probs=97.7
Q ss_pred ccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEEC-----------CeeeEEEeeccC
Q psy17021 18 PFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVG-----------NAMEFVHKTSVD 84 (199)
Q Consensus 18 ~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vg-----------dklesVh~~~~k 84 (199)
+-...+++|-. +.+++||+...+.++..... ...+ ..+.-. .+..++++ +..+.+.....+
T Consensus 151 ~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~---~~~i---~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 224 (337)
T 1gxr_A 151 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH---TDGA---SCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT 224 (337)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCC---SSCE---EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCceeeeeecc---cCce---EEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC
Confidence 33345555544 78999999876665533221 1112 111111 22233332 223445555677
Q ss_pred CcceEEccc-cC-eEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEeccccEEEEEEeCCCCeE
Q psy17021 85 EVPYAMCPF-QG-ALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSDVQESVFLVRYKRYENQL 159 (199)
Q Consensus 85 G~v~aL~~f-~g-~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~Sv~ll~y~~~~~~l 159 (199)
+++.++.-- +| .++++- ++++++|++...+....... ...+.++... ++++++|..-..+.++.. ..++.
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~--~~~~~ 299 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLH---ESCVLSLKFAYCGKWFVSTGKDNLLNAWRT--PYGAS 299 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCC---SSCEEEEEECTTSSEEEEEETTSEEEEEET--TTCCE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCC---ccceeEEEECCCCCEEEEecCCCcEEEEEC--CCCeE
Confidence 777776533 24 454444 68899999987765432222 2346666654 778999988777777654 33333
Q ss_pred EEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 160 LIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 160 ~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
... ......++++.+- |...++.+..+|++.++++
T Consensus 300 ~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 300 IFQ--SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEE--EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEE--ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 322 2245678888887 4457888899999999875
No 17
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.31 E-value=0.025 Score=46.04 Aligned_cols=116 Identities=13% Similarity=0.057 Sum_probs=76.2
Q ss_pred eccCCcceEEccccCeEEEEe-CCEEEEEEcCC-cce-eeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeC
Q psy17021 81 TSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGK-KKL-LRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKR 154 (199)
Q Consensus 81 ~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~-~~L-l~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~ 154 (199)
...++.++++..-.+.++++- +++|++|++.. .+. ....... ....+.++.. .++++++|..-..+.++.|+.
T Consensus 147 ~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 147 TKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESG-LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp SSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECS-CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred EeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecC-CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC
Confidence 345677888776666666554 56999999976 331 1111121 2234666665 468999999988999988876
Q ss_pred C-----CCeEEEEeccCC-------ceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 155 Y-----ENQLLIFADDTQ-------PRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 155 ~-----~~~l~~varD~~-------~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
. ......+..... ..+++++.+- |...++.+..+|.+.++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 226 QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred CCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 5 233333333222 3488888887 45578888999999988654
No 18
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.30 E-value=0.035 Score=47.70 Aligned_cols=109 Identities=10% Similarity=0.040 Sum_probs=70.9
Q ss_pred cCCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeE
Q psy17021 83 VDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQL 159 (199)
Q Consensus 83 ~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l 159 (199)
..+++.++.+-...+++|- +++|++|++...+.+..-.. ....+.++.. .++++++|..-.++.++.. ..++.
T Consensus 269 ~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~--~~~~~ 344 (464)
T 3v7d_B 269 HMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG--HTDRIYSTIYDHERKRCISASMDTTIRIWDL--ENGEL 344 (464)
T ss_dssp CSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEEETTTTEEEEEETTSCEEEEET--TTTEE
T ss_pred ccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC--CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC--CCCcE
Confidence 3456677755445565554 68999999987665443221 1233555554 4679999998888877654 34444
Q ss_pred EEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 160 LIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 160 ~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
...-. .....++++.+ +++.++.+..+|++.++...
T Consensus 345 ~~~~~-~h~~~v~~~~~-~~~~l~s~s~dg~v~vwd~~ 380 (464)
T 3v7d_B 345 MYTLQ-GHTALVGLLRL-SDKFLVSAAADGSIRGWDAN 380 (464)
T ss_dssp EEEEC-CCSSCEEEEEE-CSSEEEEEETTSEEEEEETT
T ss_pred EEEEe-CCCCcEEEEEE-cCCEEEEEeCCCcEEEEECC
Confidence 33322 24556777776 57789999999999988653
No 19
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.26 E-value=0.046 Score=43.93 Aligned_cols=108 Identities=13% Similarity=0.074 Sum_probs=71.5
Q ss_pred cCCcceEEccc-cC-eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021 83 VDEVPYAMCPF-QG-ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 83 ~kG~v~aL~~f-~g-~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
..+++.++.-- +| .|+++ -.+.+++|++...+.+...... ..+.++.. .++++++|..-..+.++..+ ..
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~--~~ 256 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT---SQIFSLGYCPTGEWLAVGMESSNVEVLHVN--KP 256 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEEEEECTTSSEEEEEETTSCEEEEETT--SS
T ss_pred ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC---CceEEEEECCCCCEEEEEcCCCcEEEEECC--CC
Confidence 45667765443 34 44443 3679999999877665544332 33555554 57799999988888776553 34
Q ss_pred eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
....+ ......++++.+- |...++.+..+|.+.++.++
T Consensus 257 ~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 257 DKYQL--HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp CEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CeEEE--cCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 44333 2345678888887 44568888889999988764
No 20
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.24 E-value=0.017 Score=47.13 Aligned_cols=119 Identities=8% Similarity=0.022 Sum_probs=74.5
Q ss_pred EEEeeccCCcceEEccc----cCe-EEEEe-CCEEEEEEcCCcceeeeee---ccCcCceEEEEEEeC--C-EEEEEecc
Q psy17021 77 FVHKTSVDEVPYAMCPF----QGA-LLVGV-GRYLRLYDLGKKKLLRKCE---NKHLPNLIVKIESMG--H-RIYVSDVQ 144 (199)
Q Consensus 77 sVh~~~~kG~v~aL~~f----~g~-LLaav-g~~v~vy~l~~~~Ll~~~~---~~~~~~~i~~l~~~~--~-~IlVGD~~ 144 (199)
.......+++++++.-- ++. +++|- ++.|++|++...+...... .......+.++.... . +++.|..-
T Consensus 202 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 281 (357)
T 3i2n_A 202 LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA 281 (357)
T ss_dssp EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC
Confidence 34455667788876644 444 44443 6899999997554322211 111223466776543 3 78999988
Q ss_pred ccEEEEEEeCCCCe------------------EEEEeccCCceeEEEEEEEeCC-eEE-EEcCCCcEEEEeec
Q psy17021 145 ESVFLVRYKRYENQ------------------LLIFADDTQPRWITTSCVLDYN-TVA-SADKFGNVCIVSTY 197 (199)
Q Consensus 145 ~Sv~ll~y~~~~~~------------------l~~varD~~~~wvta~~~Ld~~-t~l-~aD~~gNl~vlr~~ 197 (199)
..+.++..+..... +..+. ....+++++.+-.++ .++ .+..++.+.++.+.
T Consensus 282 g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 282 GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT--LSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE--CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CcEEEeecCCCcccccccCCCCccccccccceeeccc--cCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 89999988743321 22222 235678888887544 565 58889999998764
No 21
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.18 E-value=0.013 Score=47.85 Aligned_cols=173 Identities=12% Similarity=0.071 Sum_probs=95.1
Q ss_pred CCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECC-----------eeeEEEeeccCCcc
Q psy17021 20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGN-----------AMEFVHKTSVDEVP 87 (199)
Q Consensus 20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgd-----------klesVh~~~~kG~v 87 (199)
...|++|.. +.+++||+...+.++..... ..++.+.-.....+..++.+. ..+.+......+.+
T Consensus 98 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 173 (368)
T 3mmy_A 98 GSKVFTASCDKTAKMWDLSSNQAIQIAQHD----APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERC 173 (368)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECS----SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCE
T ss_pred CCEEEEEcCCCcEEEEEcCCCCceeecccc----CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCc
Confidence 335555553 78999999887766532222 222211110011222344331 22333444555677
Q ss_pred eEEccccCeEE-EEeCCEEEEEEcCCccee-eeee-ccCcCceEEEEEEeCCE----EEEEeccccEEEEEEeCCCC--e
Q psy17021 88 YAMCPFQGALL-VGVGRYLRLYDLGKKKLL-RKCE-NKHLPNLIVKIESMGHR----IYVSDVQESVFLVRYKRYEN--Q 158 (199)
Q Consensus 88 ~aL~~f~g~LL-aavg~~v~vy~l~~~~Ll-~~~~-~~~~~~~i~~l~~~~~~----IlVGD~~~Sv~ll~y~~~~~--~ 158 (199)
.++......++ ++-++.+.+|++...... .... .......+..+...... +++|..-.++.++.++.... .
T Consensus 174 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 174 YCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKD 253 (368)
T ss_dssp EEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred eEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccc
Confidence 77777777655 445788999999754311 1111 11122234444443333 88999888888887754421 1
Q ss_pred EEEEeccCCc-----------eeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 159 LLIFADDTQP-----------RWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 159 l~~varD~~~-----------~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
...+ +.+.. .+++++.+- |...++.+..+|.|.++.+.
T Consensus 254 ~~~~-~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~ 303 (368)
T 3mmy_A 254 NFTF-KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKD 303 (368)
T ss_dssp SEEE-ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred ceee-eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECC
Confidence 1111 11111 168888887 44578899999999988754
No 22
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.15 E-value=0.072 Score=43.27 Aligned_cols=109 Identities=11% Similarity=0.124 Sum_probs=71.3
Q ss_pred cceEEc-----cccCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE-----eCCEEEEEeccccEEEEEEe
Q psy17021 86 VPYAMC-----PFQGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES-----MGHRIYVSDVQESVFLVRYK 153 (199)
Q Consensus 86 ~v~aL~-----~f~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-----~~~~IlVGD~~~Sv~ll~y~ 153 (199)
.++++. .-++. +++|- .+.|++|++...+........ ..+.++.. .++++++|..-..+.++...
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIK---NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCC---CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 566554 12454 44443 479999999887764443332 34666664 46899999988889888765
Q ss_pred CCC--CeEEEEeccCCceeEEEEEEEeCC--eEEEEcCCCcEEEEeec
Q psy17021 154 RYE--NQLLIFADDTQPRWITTSCVLDYN--TVASADKFGNVCIVSTY 197 (199)
Q Consensus 154 ~~~--~~l~~varD~~~~wvta~~~Ld~~--t~l~aD~~gNl~vlr~~ 197 (199)
... ..+....-.....+++++.+-.++ .++.+..+|.+.++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 243 TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp EEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred CCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 432 333322223456788999888554 48888999999988764
No 23
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.076 Score=43.38 Aligned_cols=115 Identities=9% Similarity=0.033 Sum_probs=74.4
Q ss_pred cCCcceEEcccc---Ce-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---------------CCEEEEEe
Q psy17021 83 VDEVPYAMCPFQ---GA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---------------GHRIYVSD 142 (199)
Q Consensus 83 ~kG~v~aL~~f~---g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---------------~~~IlVGD 142 (199)
..++++++.--. |. ++++ -..+|++|++...+.............+.++... ++++++|.
T Consensus 100 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 179 (379)
T 3jrp_A 100 HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG 179 (379)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEE
T ss_pred CCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEe
Confidence 456777765432 43 4433 3689999999765322222222123346666543 67999999
Q ss_pred ccccEEEEEEeCCCCeEEEEe-ccCCceeEEEEEEEeC----CeEEEEcCCCcEEEEeec
Q psy17021 143 VQESVFLVRYKRYENQLLIFA-DDTQPRWITTSCVLDY----NTVASADKFGNVCIVSTY 197 (199)
Q Consensus 143 ~~~Sv~ll~y~~~~~~l~~va-rD~~~~wvta~~~Ld~----~t~l~aD~~gNl~vlr~~ 197 (199)
.-..+.++...........+. -.....+++++.+-.+ ..++.+..+|.+.++.+.
T Consensus 180 ~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 180 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 999999998876555443332 2234567889988854 578889999999988764
No 24
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.05 E-value=0.025 Score=47.61 Aligned_cols=172 Identities=8% Similarity=0.018 Sum_probs=95.9
Q ss_pred eecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECC-----------eeeEEEe-e
Q psy17021 15 AMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGN-----------AMEFVHK-T 81 (199)
Q Consensus 15 ~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgd-----------klesVh~-~ 81 (199)
++.+-..+|++|.. +.+++||+...+..+.-+.. . +. ........+..+++|. ..+.... .
T Consensus 63 ~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~----~-~~-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 63 TFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA----D-YT-AVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp EEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC----C-EE-EEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred eeeecCCeEEEEEcCCcEEEEEecccceeeEEecC----C-ce-EEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 45555666766654 78999999876655432222 1 10 0111112223344321 1222333 2
Q ss_pred ccCCcceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCC
Q psy17021 82 SVDEVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 82 ~~kG~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
...+++++++-- +|+ |++|- .++|++|++...+.+..-.- ....+.++.. .+++++.|..-.++.++.. ..
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~--~~ 212 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG--HRATVTDIAIIDRGRNVLSASLDGTIRLWEC--GT 212 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC--CSSCEEEEEEETTTTEEEEEETTSCEEEEET--TT
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC--CCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC--CC
Confidence 556778876644 344 44333 58999999987654433221 1234666665 4678999998888877754 33
Q ss_pred CeEE-EEec-cCCceeEEEEEEE----------------------eCCeEEEEcCCCcEEEEee
Q psy17021 157 NQLL-IFAD-DTQPRWITTSCVL----------------------DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 157 ~~l~-~var-D~~~~wvta~~~L----------------------d~~t~l~aD~~gNl~vlr~ 196 (199)
++.. .+.. ......+.++.+. |...++.+..+|.+.++.+
T Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 276 (420)
T 3vl1_A 213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNV 276 (420)
T ss_dssp TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEET
T ss_pred CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEEC
Confidence 3332 2221 1234556666653 2336888889999988754
No 25
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.04 E-value=0.04 Score=48.50 Aligned_cols=118 Identities=15% Similarity=0.083 Sum_probs=80.2
Q ss_pred EEEeeccCCcceEEccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEE
Q psy17021 77 FVHKTSVDEVPYAMCPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRY 152 (199)
Q Consensus 77 sVh~~~~kG~v~aL~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y 152 (199)
.+......+++.+++--...|++|- ++++++|++...++.. .........+.++.. .+.++++|+.-.++.++..
T Consensus 439 ~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 517 (615)
T 1pgu_A 439 IIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDL 517 (615)
T ss_dssp EEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeC
Confidence 3444456778887765533454554 5789999998876643 233222345777765 5789999998888877654
Q ss_pred eCCCCeEEEEeccCCceeEEEEEEEe-----------CCeEEEEcCCCcEEEEeec
Q psy17021 153 KRYENQLLIFADDTQPRWITTSCVLD-----------YNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 153 ~~~~~~l~~varD~~~~wvta~~~Ld-----------~~t~l~aD~~gNl~vlr~~ 197 (199)
..++....-.......++++.+-. ...++.+..+|.+.++.++
T Consensus 518 --~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 571 (615)
T 1pgu_A 518 --QSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK 571 (615)
T ss_dssp --TTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred --CCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECC
Confidence 455554443433677899999875 4478888999999998765
No 26
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.03 E-value=0.07 Score=44.33 Aligned_cols=105 Identities=10% Similarity=-0.009 Sum_probs=63.8
Q ss_pred cCe-EEEEe--CCEEEEEEcCCcceeeeeecc---CcCceEEEEEE--eCCEEEEEecc--ccEEEEEEeCCCCeEEEEe
Q psy17021 94 QGA-LLVGV--GRYLRLYDLGKKKLLRKCENK---HLPNLIVKIES--MGHRIYVSDVQ--ESVFLVRYKRYENQLLIFA 163 (199)
Q Consensus 94 ~g~-LLaav--g~~v~vy~l~~~~Ll~~~~~~---~~~~~i~~l~~--~~~~IlVGD~~--~Sv~ll~y~~~~~~l~~va 163 (199)
+|+ +.++- +++|.+|++...++....... .....+..+.. .+.++++++-. .++.++..++..+++..+.
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~ 300 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVG 300 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEee
Confidence 454 54444 689999999765543222221 11122344443 57788888876 6899999886666665554
Q ss_pred ccCCceeEEEEEEE-eCCeEEEEc-CCCcEEEEeecC
Q psy17021 164 DDTQPRWITTSCVL-DYNTVASAD-KFGNVCIVSTYR 198 (199)
Q Consensus 164 rD~~~~wvta~~~L-d~~t~l~aD-~~gNl~vlr~~~ 198 (199)
.-....++.++.+- |...+++++ ..+++.++++++
T Consensus 301 ~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 301 YQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred EecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 43223455566665 334566666 668888988775
No 27
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.00 E-value=0.088 Score=44.63 Aligned_cols=170 Identities=13% Similarity=0.086 Sum_probs=91.2
Q ss_pred CCEEEEeec-CeeEEEecchhhhhhhhhhcc-cccCceeeeeEEEE-EcCceeEECC-----------eeeEEEee-ccC
Q psy17021 20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKV-RIKGFRKAHQTHTH-SGRSDRLVGN-----------AMEFVHKT-SVD 84 (199)
Q Consensus 20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~-~~~~~~~~~~~~~~-~~~~ri~vgd-----------klesVh~~-~~k 84 (199)
.++|++|.. +.+||||+...+.+....... .....+ ..+.- ..+.+++.|. ..+.+... .-.
T Consensus 93 d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V---~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~ 169 (344)
T 4gqb_B 93 ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIV---STVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHA 169 (344)
T ss_dssp TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCE---EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCE---EEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcC
Confidence 467887776 789999997766554322110 011222 12211 1223444321 12222222 245
Q ss_pred CcceEEccc--cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---CCEEEEEeccccEEEEEEeCCCC
Q psy17021 85 EVPYAMCPF--QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---GHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 85 G~v~aL~~f--~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
+.|+++.-- ...++++ -.++|++|++...+.............+.++... +++++.|..-..|.++..+..+
T Consensus 170 ~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~- 248 (344)
T 4gqb_B 170 AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS- 248 (344)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---
T ss_pred CceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc-
Confidence 677776532 3345543 3689999999876644433222112236666643 4577888887788776543222
Q ss_pred eEEEEeccCCceeEEEEEEEeC-Ce-EEEEcCCCcEEEEe
Q psy17021 158 QLLIFADDTQPRWITTSCVLDY-NT-VASADKFGNVCIVS 195 (199)
Q Consensus 158 ~l~~varD~~~~wvta~~~Ld~-~t-~l~aD~~gNl~vlr 195 (199)
.+..+. ....+|+++.|-.+ .. ++.+..++.+.++.
T Consensus 249 ~~~~~~--~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd 286 (344)
T 4gqb_B 249 CVLSSA--VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLD 286 (344)
T ss_dssp CCEEEE--CCSSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred EEEEEc--CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEE
Confidence 222222 24567899988744 34 55677888888764
No 28
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.99 E-value=0.12 Score=42.96 Aligned_cols=111 Identities=12% Similarity=0.043 Sum_probs=71.1
Q ss_pred cCCcceEEccc-cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021 83 VDEVPYAMCPF-QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
..++++++.-- +|.++++ -.++|++|++...+.... +......+.++.. .+++++.|..-..|.++..+. ..
T Consensus 183 h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~-~~ 259 (340)
T 1got_B 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA-DQ 259 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC-Cc
Confidence 45677776543 3444433 368999999987654332 2211234666665 477999999888888875432 22
Q ss_pred eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
.+..+..+.....++++.+- |...++.+..++++.++..
T Consensus 260 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEc
Confidence 33344444445578888887 4457888899999988753
No 29
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.98 E-value=0.061 Score=44.78 Aligned_cols=108 Identities=13% Similarity=0.161 Sum_probs=66.8
Q ss_pred CcceEEccc-cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeE
Q psy17021 85 EVPYAMCPF-QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQL 159 (199)
Q Consensus 85 G~v~aL~~f-~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l 159 (199)
..+.++.-- +|+ |++| ..+.|++|++...+++...... ...+.++.- .+.+++.|..-..|.++..+ ...+
T Consensus 165 ~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h--~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~--~~~~ 240 (321)
T 3ow8_A 165 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH--AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ--HANL 240 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC--SSCCCEEEECTTSCEEEEECTTSCEEEEETT--TCCE
T ss_pred ceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccc--CCceeEEEEcCCCCEEEEEcCCCeEEEEECC--Ccce
Confidence 345544322 344 4433 3688999999877765443221 122444443 56799999988888887543 3333
Q ss_pred EEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 160 LIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 160 ~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
...-. ....+++++.+- |...++.+..++.+.+..+.
T Consensus 241 ~~~~~-~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 241 AGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp EEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 22222 245688999887 44578888899999887653
No 30
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.97 E-value=0.1 Score=41.75 Aligned_cols=140 Identities=13% Similarity=0.099 Sum_probs=84.7
Q ss_pred CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEE--ccccCeE
Q psy17021 20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAM--CPFQGAL 97 (199)
Q Consensus 20 ~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL--~~f~g~L 97 (199)
++.|.||.++.+||||+...++++..+. ..-.+.|+++ .|-...|
T Consensus 36 ~~~lAvg~D~tV~iWd~~tg~~~~~~~~---------------------------------~~~~~~V~~v~~~~~~~~l 82 (318)
T 4ggc_A 36 GNVLAVALDNSVYLWSASSGDILQLLQM---------------------------------EQPGEYISSVAWIKEGNYL 82 (318)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEEC---------------------------------CSTTCCEEEEEECTTSSEE
T ss_pred CCEEEEEeCCEEEEEECCCCCEEEEEEe---------------------------------cCCCCeEEEEEECCCCCEE
Confidence 5678899999999999744322221110 1112223333 2322344
Q ss_pred EEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEE
Q psy17021 98 LVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCV 176 (199)
Q Consensus 98 Laa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~ 176 (199)
+.| -.++|++|++...+.++..... ...+..+...++.++.|.....+..............+.. ....+.++.+
T Consensus 83 ~sgs~Dg~v~iw~~~~~~~~~~~~~h--~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 158 (318)
T 4ggc_A 83 AVGTSSAEVQLWDVQQQKRLRNMTSH--SARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSG--HSQEVCGLRW 158 (318)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECC--SSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC--CSSCEEEEEE
T ss_pred EEEECCCcEEEeecCCceeEEEecCc--cceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcC--ccCceEEEEE
Confidence 443 3689999999888765554332 2346777788999999988877766654443344433333 3345556655
Q ss_pred E-eCCeEEEEcCCCcEEEEee
Q psy17021 177 L-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 177 L-d~~t~l~aD~~gNl~vlr~ 196 (199)
- +...++.+..++.+.++..
T Consensus 159 ~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 159 APDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp CTTSSEEEEEETTSCEEEEES
T ss_pred cCCCCEEEEEecCcceeEEEC
Confidence 5 4457888888898887643
No 31
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.93 E-value=0.1 Score=44.06 Aligned_cols=110 Identities=14% Similarity=0.021 Sum_probs=68.1
Q ss_pred CCcceEEccc-cC-eEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEecccc-E---------
Q psy17021 84 DEVPYAMCPF-QG-ALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSDVQES-V--------- 147 (199)
Q Consensus 84 kG~v~aL~~f-~g-~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~S-v--------- 147 (199)
.+.+.+++-- +| .++++ -+++|++|++...++...... ...+.++... +.++++++.... +
T Consensus 302 ~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~ 378 (433)
T 3bws_A 302 PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV---FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGL 378 (433)
T ss_dssp EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCS
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC---CCCCCeEEEcCCCCEEEEEecCCCccccccccccc
Confidence 3445544322 24 56555 368999999987766554332 2335566553 668888886542 2
Q ss_pred ---EEEEEeCCCCeEEEEeccCCceeEEEEEEEeC-CeEEEEc-CCCcEEEEeecC
Q psy17021 148 ---FLVRYKRYENQLLIFADDTQPRWITTSCVLDY-NTVASAD-KFGNVCIVSTYR 198 (199)
Q Consensus 148 ---~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~-~t~l~aD-~~gNl~vlr~~~ 198 (199)
.+..|+....+....-.. ..+++++.+-.+ ..++.++ .++++.+++++.
T Consensus 379 ~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 379 VLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred cceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 566677766665554443 346788887644 4566666 489999998753
No 32
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.92 E-value=0.11 Score=41.40 Aligned_cols=114 Identities=16% Similarity=0.104 Sum_probs=67.7
Q ss_pred ccCCcceEEcccc---Ce-EEEE-eCCEEEEEEcCCcceeeeeec----------c-CcCceEEEEEE--e---CCEEEE
Q psy17021 82 SVDEVPYAMCPFQ---GA-LLVG-VGRYLRLYDLGKKKLLRKCEN----------K-HLPNLIVKIES--M---GHRIYV 140 (199)
Q Consensus 82 ~~kG~v~aL~~f~---g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~----------~-~~~~~i~~l~~--~---~~~IlV 140 (199)
...++++++.--. +. +++| -.++|++|++...+.+..... . .....+.++.. . ++++++
T Consensus 108 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~ 187 (351)
T 3f3f_A 108 DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAV 187 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEE
T ss_pred ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEE
Confidence 3456777765443 54 4433 368999999976543221110 0 01112444443 2 789999
Q ss_pred EeccccEEEEEEeCCCCeEEEE-eccCCceeEEEEEEEeC-----CeEEEEcCCCcEEEEeec
Q psy17021 141 SDVQESVFLVRYKRYENQLLIF-ADDTQPRWITTSCVLDY-----NTVASADKFGNVCIVSTY 197 (199)
Q Consensus 141 GD~~~Sv~ll~y~~~~~~l~~v-arD~~~~wvta~~~Ld~-----~t~l~aD~~gNl~vlr~~ 197 (199)
|..-..+ ++. ....++...+ .-.....+++++.+-.+ +.++.+..+|.+.++.+.
T Consensus 188 ~~~~~~~-~~~-~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 188 SALEQAI-IYQ-RGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp EETTEEE-EEE-ECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred ecCCCcE-EEE-ccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 9988777 333 2333443222 22335678999999866 468889999999998764
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.91 E-value=0.073 Score=43.25 Aligned_cols=93 Identities=6% Similarity=-0.034 Sum_probs=64.4
Q ss_pred eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeCCCCeEEEEec--cCCceeEEEEE
Q psy17021 101 VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKRYENQLLIFAD--DTQPRWITTSC 175 (199)
Q Consensus 101 vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var--D~~~~wvta~~ 175 (199)
-+++|++|++...+++..-.. ....+.++.. .+++++.|..-.+|.++.. ..++....-. ......++++.
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVG--HGNAINELKFHPRDPNLLLSVSKDHALRLWNI--QTDTLVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEES--CCSCEEEEEECSSCTTEEEEEETTSCEEEEET--TTTEEEEEECSTTSCSSCEEEEE
T ss_pred CCCEEEEEEchhceEeeeecC--CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe--ecCeEEEEecccccccCceeEEE
Confidence 367899999987765443321 2334777765 4679999998888888755 3444433332 44567889998
Q ss_pred EE-eCCeEEEEcCCCcEEEEeec
Q psy17021 176 VL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 176 ~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
+- |.+.++.+..+|.+.++.+.
T Consensus 169 ~~~~~~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 169 YDLLGEKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp ECTTSSEEEEEETTSCEEEEESC
T ss_pred ECCCCCEEEEecCCCCEEEEECC
Confidence 87 45578888999999988653
No 34
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.91 E-value=0.094 Score=42.49 Aligned_cols=162 Identities=7% Similarity=-0.025 Sum_probs=88.3
Q ss_pred cccCCEEEEeec-CeeEEEecch---------hhhhhhhhhcccccCceeeeeEEEEEcCceeEECCee-----------
Q psy17021 17 CPFQGALLVGVG-RYLRLYDLGK---------KKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAM----------- 75 (199)
Q Consensus 17 ~~f~~~ll~~~~-~~l~~y~~g~---------k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdkl----------- 75 (199)
.+ .+.++.|-. +.+++||+.. .+.++.-.. +..+ .-..+..+.++++..-
T Consensus 110 ~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~----~~~v----~~~~~~~~~l~~~~~d~~i~i~d~~~~ 180 (342)
T 1yfq_A 110 YG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV----KNKI----FTMDTNSSRLIVGMNNSQVQWFRLPLC 180 (342)
T ss_dssp ET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSS----CCCE----EEEEECSSEEEEEESTTEEEEEESSCC
T ss_pred CC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEee----CCce----EEEEecCCcEEEEeCCCeEEEEECCcc
Confidence 34 566666655 7899999876 554443321 1222 2223333445443211
Q ss_pred ----eEEEeeccCCcceEEccc--cCe-EEEE-eCCEEEEEEcCCc------ceeeeeeccCc-------CceEEEEEE-
Q psy17021 76 ----EFVHKTSVDEVPYAMCPF--QGA-LLVG-VGRYLRLYDLGKK------KLLRKCENKHL-------PNLIVKIES- 133 (199)
Q Consensus 76 ----esVh~~~~kG~v~aL~~f--~g~-LLaa-vg~~v~vy~l~~~------~Ll~~~~~~~~-------~~~i~~l~~- 133 (199)
........++++.++.-. +|. +++| ..+.+++|++... +....-..... ...+.++..
T Consensus 181 ~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 260 (342)
T 1yfq_A 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS 260 (342)
T ss_dssp TTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEEC
T ss_pred ccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEc
Confidence 112233345566665544 344 4433 3679999999654 32222111101 114666654
Q ss_pred -eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCc
Q psy17021 134 -MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190 (199)
Q Consensus 134 -~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gN 190 (199)
.++++++|+.-..|.++. ...++....-..+...+++++. -|...++.+-.+|-
T Consensus 261 ~~~~~l~~~~~dg~i~vwd--~~~~~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 261 PRHKFLYTAGSDGIISCWN--LQTRKKIKNFAKFNEDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp TTTCCEEEEETTSCEEEEE--TTTTEEEEECCCCSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred CCCCEEEEecCCceEEEEc--CccHhHhhhhhcccCCCceEec-CCCCeEEEEecCCc
Confidence 477899999877777764 4555554444444367888888 66666666665554
No 35
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.91 E-value=0.15 Score=42.87 Aligned_cols=161 Identities=9% Similarity=0.016 Sum_probs=88.7
Q ss_pred EEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEE-CCeeeEEEeeccCC------------cceE
Q psy17021 24 LVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV-GNAMEFVHKTSVDE------------VPYA 89 (199)
Q Consensus 24 l~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v-gdklesVh~~~~kG------------~v~a 89 (199)
++|-+ +.+++||+-+.+.+..-+ .+.. +.. ..+..+++++ .+. .+....++. .+.+
T Consensus 75 ~~~~~d~~v~iWd~~~~~~~~~~~----~~~~---v~~-v~~~~~~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~~~~ 144 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQDVSRIK----VDAP---VKD-LFLSREFIVVSYGD--VISVFKFGNPWKRITDDIRFGGVCE 144 (355)
T ss_dssp EECSSTTEEEEEETTTTEEEEEEE----CSSC---EEE-EEECSSEEEEEETT--EEEEEESSTTCCBSSCCEEEEEEEE
T ss_pred EEECCccEEEEEECCCCcEEEEEE----CCCc---eEE-EEEcCCEEEEEEcC--EEEEEECCCCceeeEEeccCCceEE
Confidence 45555 589999997766655332 2232 222 2233344432 222 122222222 2334
Q ss_pred EccccCeEEEE---eCCEEEEEEcCCcc-------------eee-eeeccCcCceEEEEEE--eCCEEEEEecccc-EEE
Q psy17021 90 MCPFQGALLVG---VGRYLRLYDLGKKK-------------LLR-KCENKHLPNLIVKIES--MGHRIYVSDVQES-VFL 149 (199)
Q Consensus 90 L~~f~g~LLaa---vg~~v~vy~l~~~~-------------Ll~-~~~~~~~~~~i~~l~~--~~~~IlVGD~~~S-v~l 149 (199)
+.+ +.++++ -..+|++|++...+ +.. ...+..-...|.++.- .+++++.|..-.+ |.+
T Consensus 145 ~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~i 222 (355)
T 3vu4_A 145 FSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRV 222 (355)
T ss_dssp EET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEE
T ss_pred EEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEE
Confidence 444 444443 34689999997533 000 1122211223666654 5778999988887 777
Q ss_pred EEEeCCCCeEEEEeccCCceeEEEEEEEe-CCeEEEEcCCCcEEEEeec
Q psy17021 150 VRYKRYENQLLIFADDTQPRWITTSCVLD-YNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 150 l~y~~~~~~l~~varD~~~~wvta~~~Ld-~~t~l~aD~~gNl~vlr~~ 197 (199)
...+. ...+..+.+...+..++++.+-. ...++.+..++.+.++.+.
T Consensus 223 wd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 223 FKTED-GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp EETTT-CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EECCC-CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 65432 33444554444667899999874 4467778888999998764
No 36
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.90 E-value=0.13 Score=42.69 Aligned_cols=166 Identities=15% Similarity=0.138 Sum_probs=92.6
Q ss_pred CCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCcee-EEC--Ce---------eeEE-EeeccCC
Q psy17021 20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDR-LVG--NA---------MEFV-HKTSVDE 85 (199)
Q Consensus 20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri-~vg--dk---------lesV-h~~~~kG 85 (199)
.++++.|.+ +.+++||+...+.++.-+.- ... +..+....+++. +.| |. .+.+ .+....+
T Consensus 154 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h---~~~---v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~ 227 (340)
T 1got_B 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGH---TGD---VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227 (340)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCC---SSC---EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS
T ss_pred CCcEEEEECCCcEEEEECCCCcEEEEEcCC---CCc---eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcC
Confidence 466777766 88999999776654422111 111 222222222222 222 11 1112 2223456
Q ss_pred cceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEE
Q psy17021 86 VPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLL 160 (199)
Q Consensus 86 ~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~ 160 (199)
++++++-- +|. |++|- .++|++|++...+.+...........+.++.- .+.++++|.--..|.++.... ...+.
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~ 306 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAG 306 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEE
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc-CcEee
Confidence 67765533 344 44333 57899999987664443333222224666654 477999998887887765432 23333
Q ss_pred EEeccCCceeEEEEEEEeCC-eEEEEcCCCcEEEE
Q psy17021 161 IFADDTQPRWITTSCVLDYN-TVASADKFGNVCIV 194 (199)
Q Consensus 161 ~varD~~~~wvta~~~Ld~~-t~l~aD~~gNl~vl 194 (199)
.+.. ...+|+++.+-.++ .++.+..++.+.+.
T Consensus 307 ~~~~--h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 307 VLAG--HDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp EEEC--CSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred Eeec--CCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 3332 34578888887544 68888889988765
No 37
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.88 E-value=0.13 Score=43.51 Aligned_cols=111 Identities=13% Similarity=0.155 Sum_probs=71.6
Q ss_pred ccCCcceEEc--cccCeEEEEe----CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEE--EeccccEEEEE
Q psy17021 82 SVDEVPYAMC--PFQGALLVGV----GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYV--SDVQESVFLVR 151 (199)
Q Consensus 82 ~~kG~v~aL~--~f~g~LLaav----g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlV--GD~~~Sv~ll~ 151 (199)
...+++.++. |..+.+++.. .+.+++|++...+.+..... +..+.++.- .+..+++ |..-..+.++.
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~ 333 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA---GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWS 333 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC---SSCEEEEEECSSSSEEEEEECTTTCEEEEEE
T ss_pred CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC---CCcEEEEEECCCCCeEEEEeecCCCcEEEEe
Confidence 4556666654 4345676653 58999999987765554433 234666654 5678888 65777888887
Q ss_pred EeCCCCeEEEEec-cCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 152 YKRYENQLLIFAD-DTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 152 y~~~~~~l~~var-D~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
+.. +.+..... ......++++.+- |...++.+..+|.+.++.+.
T Consensus 334 ~~~--~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 334 YSS--SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp EET--TEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred cCC--ccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 754 33333221 2334567777776 44578888999999998764
No 38
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.87 E-value=0.059 Score=44.56 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=74.1
Q ss_pred EEEeeccCCcceEEc--ccc--C-eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CC-EEEEEeccccE
Q psy17021 77 FVHKTSVDEVPYAMC--PFQ--G-ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GH-RIYVSDVQESV 147 (199)
Q Consensus 77 sVh~~~~kG~v~aL~--~f~--g-~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~-~IlVGD~~~Sv 147 (199)
.+.....++.+.++. ++. + .+++| -++.|++|++...+.+..-.. ....+.++... ++ .+++|+.-..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~ll~~~~~dg~i 211 (408)
T 4a11_B 134 TADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG--HRQEILAVSWSPRYDYILATASADSRV 211 (408)
T ss_dssp EEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC--CCSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred cceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC--CCCcEEEEEECCCCCcEEEEEcCCCcE
Confidence 344445566666544 332 2 34433 367899999987654433221 22346777654 44 58899988888
Q ss_pred EEEEEeCCCCeEEEEec-------------cCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 148 FLVRYKRYENQLLIFAD-------------DTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 148 ~ll~y~~~~~~l~~var-------------D~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
.++..+.....+..+.. .....+++++.+- |...++.+..+|.+.++.+.
T Consensus 212 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 212 KLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS 275 (408)
T ss_dssp EEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC
Confidence 88876544433333321 2345678888887 44478889999999998754
No 39
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.86 E-value=0.17 Score=42.81 Aligned_cols=168 Identities=12% Similarity=0.058 Sum_probs=92.0
Q ss_pred cccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-------------eeEEEeec
Q psy17021 17 CPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-------------MEFVHKTS 82 (199)
Q Consensus 17 ~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-------------lesVh~~~ 82 (199)
.+-...|++|.. +.+++||+...+.++.-... .. -+.-..|.+..++.|.. ........
T Consensus 143 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~----~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 215 (401)
T 4aez_A 143 SHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGH---QA----RVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQG 215 (401)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCC---SS----CEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC
T ss_pred CCCCCEEEEECCCCeEEEEECcCCeEEEEecCC---CC----ceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcC
Confidence 343446666654 78999999876665543221 12 22334445455555421 11222233
Q ss_pred cCCcceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---CCEEEEEe--ccccEEEEEEeC
Q psy17021 83 VDEVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---GHRIYVSD--VQESVFLVRYKR 154 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD--~~~Sv~ll~y~~ 154 (199)
..+.+.++.-- +|. |++|- .+.|++|++...+....... ....+.++... ++.++.|. .-..+.++ +.
T Consensus 216 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~--d~ 291 (401)
T 4aez_A 216 HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN--HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW--NA 291 (401)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC--CSSCCCEEEECTTSTTEEEEECCTTTCEEEEE--ET
T ss_pred CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC--CcceEEEEEECCCCCCEEEEecCCCCCEEEEE--EC
Confidence 45666665433 444 44333 58999999987654433221 12335555553 35666654 44555555 43
Q ss_pred CCCe-EEEEeccCCceeEEEEEEEeCC-eEEE--EcCCCcEEEEeecC
Q psy17021 155 YENQ-LLIFADDTQPRWITTSCVLDYN-TVAS--ADKFGNVCIVSTYR 198 (199)
Q Consensus 155 ~~~~-l~~varD~~~~wvta~~~Ld~~-t~l~--aD~~gNl~vlr~~~ 198 (199)
..++ +..+. ....++++.+-.++ .++. +..+|.+.++.++.
T Consensus 292 ~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 292 ATGARVNTVD---AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp TTCCEEEEEE---CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred CCCCEEEEEe---CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 4433 33332 34568888887444 5555 44789999887653
No 40
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.81 E-value=0.081 Score=44.15 Aligned_cols=106 Identities=12% Similarity=0.078 Sum_probs=66.0
Q ss_pred CcceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CC-EEEEEeccccEEEEEEeCCC--
Q psy17021 85 EVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GH-RIYVSDVQESVFLVRYKRYE-- 156 (199)
Q Consensus 85 G~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~-~IlVGD~~~Sv~ll~y~~~~-- 156 (199)
+.+.++.-- +|. |++|- .++|++|++..+.+...... ...+.++... +. +++.|..-..+.++......
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h---~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 240 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLH---KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK 240 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECS---SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST
T ss_pred CCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccC---CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc
Confidence 445555433 244 44333 58999999965443222222 2346666654 44 88999888888887665422
Q ss_pred CeE-EEEeccCCceeEEEEEEEe--CCeEEEEcCCCcEEEEee
Q psy17021 157 NQL-LIFADDTQPRWITTSCVLD--YNTVASADKFGNVCIVST 196 (199)
Q Consensus 157 ~~l-~~varD~~~~wvta~~~Ld--~~t~l~aD~~gNl~vlr~ 196 (199)
..+ ..+. ...+++++.+-. ...++.+..++.+.++.+
T Consensus 241 ~~~~~~~~---~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~ 280 (383)
T 3ei3_B 241 NSYIAEMP---HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSS 280 (383)
T ss_dssp TCEEEEEE---CSSCEEEEEECTTTSCEEEEEESSSEEEEEET
T ss_pred cceEEEec---CCCceEEEEEcCCCCCEEEEEcCCCcEEEEEC
Confidence 333 3332 466888888874 457888889999998864
No 41
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.81 E-value=0.19 Score=42.55 Aligned_cols=93 Identities=17% Similarity=0.122 Sum_probs=61.4
Q ss_pred EEEEEEcCCcc--eeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-e
Q psy17021 104 YLRLYDLGKKK--LLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-D 178 (199)
Q Consensus 104 ~v~vy~l~~~~--Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d 178 (199)
.++.|+....+ ..+......-...|.++.. .+.+|++|..-.+|.++ +.+..+....-......+|++++|- |
T Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw--d~~~~~~~~~~~~gH~~~V~~v~fSpd 323 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALV--KLKDLSMSKIFKQAHSFAITEVTISPD 323 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEE--ETTTTEEEEEETTSSSSCEEEEEECTT
T ss_pred EEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEE--ECCCCcEEEEecCcccCCEEEEEECCC
Confidence 56667664432 2222222212234666664 57799999998898886 4455555443345567789999998 4
Q ss_pred CCeEEEEcCCCcEEEEeecC
Q psy17021 179 YNTVASADKFGNVCIVSTYR 198 (199)
Q Consensus 179 ~~t~l~aD~~gNl~vlr~~~ 198 (199)
...++.+-.++.+.++.+|+
T Consensus 324 g~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 324 STYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp SCEEEEEETTSEEEEEECCT
T ss_pred CCEEEEEeCCCeEEEEEcCC
Confidence 44677789999999999986
No 42
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.80 E-value=0.14 Score=40.94 Aligned_cols=180 Identities=13% Similarity=0.172 Sum_probs=100.9
Q ss_pred cceeecc--cCCEEEEee---cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-eeEEEeeccC-
Q psy17021 12 VPYAMCP--FQGALLVGV---GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-MEFVHKTSVD- 84 (199)
Q Consensus 12 ~~~~~~~--f~~~ll~~~---~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-lesVh~~~~k- 84 (199)
.|.+++- -.|+|+|+- .+.+++||.. .++++.-... ....+. .+....++++++++. -..+.....+
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g~~~~~~~~~--~~~~~~---~i~~~~~g~l~v~~~~~~~i~~~~~~g 151 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQFVRKFGAT--ILQHPR---GVTVDNKGRIIVVECKVMRVIIFDQNG 151 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEECTT-SCEEEEECTT--TCSCEE---EEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred CceEEEEEcCCCeEEEEcCCCCCEEEEECCC-CcEEEEecCc--cCCCce---EEEEeCCCCEEEEECCCCEEEEEcCCC
Confidence 4666653 478998887 4789999943 3333322111 001221 222222345555321 1111111111
Q ss_pred ------------CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEE
Q psy17021 85 ------------EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVF 148 (199)
Q Consensus 85 ------------G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ 148 (199)
..+++++-- +|+++++- ++.|++|+...+.+ ...........+..+... +..++|+|....=.
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~-~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~ 230 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYL-RQIGGEGITNYPIGVGINSNGEILIADNHNNFN 230 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEE-EEESCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEE-EEEccCCccCCCcEEEECCCCCEEEEeCCCCEE
Confidence 234554433 47787765 68999999865433 222111111356677664 34688888765323
Q ss_pred EEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeecC
Q psy17021 149 LVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYR 198 (199)
Q Consensus 149 ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~~ 198 (199)
+..|+++...+..+..+.....+.++.+-.+..++++|.++.+.++++.+
T Consensus 231 i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 231 LTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred EEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 55667776777777666555567777776566788888888899998754
No 43
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.79 E-value=0.18 Score=41.85 Aligned_cols=112 Identities=6% Similarity=0.010 Sum_probs=71.7
Q ss_pred CCcceEEccc-cCe-EEEEeC----CEEEEEEcCCcceeeeeeccC-----------cCceEEEEEE--eCCEEEEEecc
Q psy17021 84 DEVPYAMCPF-QGA-LLVGVG----RYLRLYDLGKKKLLRKCENKH-----------LPNLIVKIES--MGHRIYVSDVQ 144 (199)
Q Consensus 84 kG~v~aL~~f-~g~-LLaavg----~~v~vy~l~~~~Ll~~~~~~~-----------~~~~i~~l~~--~~~~IlVGD~~ 144 (199)
++++++++-- +|. |++|-. ..|++|++...+.+....... ....+.++.. .+++++.|..-
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 312 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 312 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence 6777776543 344 444443 589999998766544332200 1234666665 47799999877
Q ss_pred ccEEEEEEeCCCCeEEEEec------cC--------------CceeEEEEEEEeC-----------CeEEEEcCCCcEEE
Q psy17021 145 ESVFLVRYKRYENQLLIFAD------DT--------------QPRWITTSCVLDY-----------NTVASADKFGNVCI 193 (199)
Q Consensus 145 ~Sv~ll~y~~~~~~l~~var------D~--------------~~~wvta~~~Ld~-----------~t~l~aD~~gNl~v 193 (199)
..+.++.. ...+....-. .+ ....++++.+..+ ..++.+..+|.+.+
T Consensus 313 g~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~i 390 (397)
T 1sq9_A 313 GKLRFWDV--KTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW 390 (397)
T ss_dssp SEEEEEET--TTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEE
T ss_pred CeEEEEEc--CCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEE
Confidence 77777654 3343333333 11 1678999999866 47889999999999
Q ss_pred Eeec
Q psy17021 194 VSTY 197 (199)
Q Consensus 194 lr~~ 197 (199)
+.+.
T Consensus 391 w~~~ 394 (397)
T 1sq9_A 391 FREA 394 (397)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 8865
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.77 E-value=0.19 Score=42.92 Aligned_cols=140 Identities=14% Similarity=0.125 Sum_probs=85.1
Q ss_pred CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEEccc-cCe-E
Q psy17021 20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPF-QGA-L 97 (199)
Q Consensus 20 ~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL~~f-~g~-L 97 (199)
++.|.||.++.++|||....++++-+ ....-.+.|++++-- +|. |
T Consensus 116 ~n~lAvgld~tV~lWd~~tg~~~~~~---------------------------------~~~~~~~~V~sv~fspdg~~l 162 (420)
T 4gga_A 116 GNVLAVALDNSVYLWSASSGDILQLL---------------------------------QMEQPGEYISSVAWIKEGNYL 162 (420)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEE---------------------------------ECCSTTCCEEEEEECTTSSEE
T ss_pred CCEEEEEeCCEEEEEECCCCCEEEEE---------------------------------EecCCCCcEEEEEECCCCCEE
Confidence 57889999999999997432211111 111112234443311 343 4
Q ss_pred EEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEE
Q psy17021 98 LVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCV 176 (199)
Q Consensus 98 Laav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~ 176 (199)
++|- ..+|++|++...+.++.... -...+.++...+++++.|..-..+.+............+... ...++++.+
T Consensus 163 asgs~Dg~v~iWd~~~~~~~~~~~~--h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h--~~~~~~~~~ 238 (420)
T 4gga_A 163 AVGTSSAEVQLWDVQQQKRLRNMTS--HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGH--SQEVCGLRW 238 (420)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC--SSCEEEEEE
T ss_pred EEEECCCeEEEEEcCCCcEEEEEeC--CCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccc--ccceeeeee
Confidence 4433 68899999988776554322 234577888889999999888888777655444444444433 345556666
Q ss_pred E-eCCeEEEEcCCCcEEEEee
Q psy17021 177 L-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 177 L-d~~t~l~aD~~gNl~vlr~ 196 (199)
- +...++.+..++.+.+...
T Consensus 239 ~~~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 239 APDGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp CTTSSEEEEEETTSCEEEEES
T ss_pred cCCCCeeeeeeccccceEEee
Confidence 5 4446777778888777643
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.77 E-value=0.19 Score=42.05 Aligned_cols=102 Identities=10% Similarity=-0.040 Sum_probs=65.2
Q ss_pred cCeEE-EEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CC-EEEEEeccccEEEEEEeCCCCeEEEEeccCCc
Q psy17021 94 QGALL-VGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GH-RIYVSDVQESVFLVRYKRYENQLLIFADDTQP 168 (199)
Q Consensus 94 ~g~LL-aav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~-~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~ 168 (199)
+|+.+ +|- .+.|++|++...+........ ....+.++... +. ++++|..-..+.++........+..+.. ...
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-~~~ 335 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSK-FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI-NEG 335 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCT-TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE-STT
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccc-cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc-cCC
Confidence 45444 333 568999999776543333221 23357777764 44 9999998888888776543332344433 234
Q ss_pred eeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 169 RWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 169 ~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
..++++.+-|...++.+..++.+.++.+.
T Consensus 336 ~~v~~~~~~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 336 TPINNVYFAAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp SCEEEEEEETTEEEEEETTTEEEEEEEEC
T ss_pred CCceEEEeCCCCEEEEecCCccEEEEecc
Confidence 46777766666688889999999888754
No 46
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.081 Score=43.84 Aligned_cols=174 Identities=14% Similarity=0.018 Sum_probs=95.3
Q ss_pred ccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCc-e---------eeeeEEEEEcCceeEECCeeeEEE-------
Q psy17021 18 PFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGF-R---------KAHQTHTHSGRSDRLVGNAMEFVH------- 79 (199)
Q Consensus 18 ~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~-~---------~~~~~~~~~~~~ri~vgdklesVh------- 79 (199)
+-...|++|-. +.+++||+...+.++...... .+.. + ..+.......+++++++..-..+.
T Consensus 159 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~ 237 (425)
T 1r5m_A 159 KDGTHIISMDVENVTILWNVISGTVMQHFELKE-TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK 237 (425)
T ss_dssp TTSSEEEEEETTCCEEEEETTTTEEEEEECCC----------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS
T ss_pred CCCCEEEEEecCCeEEEEECCCCcEEEEeeccc-cCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC
Confidence 33445555544 789999997776665433221 0000 0 001111112234454432211111
Q ss_pred -----eeccCCcceEEccc-cC-eEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCC-EEEEEeccccEEEE
Q psy17021 80 -----KTSVDEVPYAMCPF-QG-ALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH-RIYVSDVQESVFLV 150 (199)
Q Consensus 80 -----~~~~kG~v~aL~~f-~g-~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~-~IlVGD~~~Sv~ll 150 (199)
....+++++++.-- +| .|+++- ...+++|++...+....... ....+.++....+ ++++|..-..+.++
T Consensus 238 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~ 315 (425)
T 1r5m_A 238 TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG--HSQSIVSASWVGDDKVISCSMDGSVRLW 315 (425)
T ss_dssp SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC--CSSCEEEEEEETTTEEEEEETTSEEEEE
T ss_pred ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecC--CCccEEEEEECCCCEEEEEeCCCcEEEE
Confidence 12335666665533 34 454444 68899999987654433221 2234667765433 88899888877776
Q ss_pred EEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 151 RYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 151 ~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
.. ...+....-. .....++++.+- |...++.+..+|.+.++.+.
T Consensus 316 d~--~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 316 SL--KQNTLLALSI-VDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp ET--TTTEEEEEEE-CTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred EC--CCCcEeEecc-cCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 54 3444433333 234578888887 44578888899999998754
No 47
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.66 E-value=0.18 Score=42.60 Aligned_cols=108 Identities=9% Similarity=0.018 Sum_probs=67.8
Q ss_pred cceEEc--cccCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--C-CEEEEEeccccEEEEEEeCCCCe
Q psy17021 86 VPYAMC--PFQGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--G-HRIYVSDVQESVFLVRYKRYENQ 158 (199)
Q Consensus 86 ~v~aL~--~f~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~-~~IlVGD~~~Sv~ll~y~~~~~~ 158 (199)
.++++. |-.++++|+ -+++|++|++...+.+..-.. ....|.++.-. + .+++.|..-.+|.++ +...++
T Consensus 216 ~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~--h~~~v~~v~fsp~g~~~lasgs~D~~i~vw--d~~~~~ 291 (344)
T 4gqb_B 216 LPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV--HSQCVTGLVFSPHSVPFLASLSEDCSLAVL--DSSLSE 291 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC--CSSCEEEEEECSSSSCCEEEEETTSCEEEE--CTTCCE
T ss_pred cceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC--CCCCEEEEEEccCCCeEEEEEeCCCeEEEE--ECCCCc
Confidence 455543 445666543 368999999987665443221 12347777653 4 467778777787775 556666
Q ss_pred EEEEeccCCceeEEEEEEE-eCCeEE-EEcCCCcEEEEeecCC
Q psy17021 159 LLIFADDTQPRWITTSCVL-DYNTVA-SADKFGNVCIVSTYRE 199 (199)
Q Consensus 159 l~~varD~~~~wvta~~~L-d~~t~l-~aD~~gNl~vlr~~~~ 199 (199)
+..+ .-...+|+++.+= |...++ .+-.++.+.+..+|.|
T Consensus 292 ~~~~--~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 292 LFRS--QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEE--CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EEEE--cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 6554 2345689999986 444554 5677899999988754
No 48
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.61 E-value=0.17 Score=43.74 Aligned_cols=110 Identities=9% Similarity=0.037 Sum_probs=65.2
Q ss_pred CCcceEEcccc----CeEE-EE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEEEEeCCC
Q psy17021 84 DEVPYAMCPFQ----GALL-VG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 84 kG~v~aL~~f~----g~LL-aa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
.++++++.--. |++| +| -..+|++|++...+.+...... ....+.++.. .+++++.|..-..|.++.++ .
T Consensus 195 ~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~--~ 271 (450)
T 2vdu_B 195 VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG-HKHFVSSICCGKDYLLLSAGGDDKIFAWDWK--T 271 (450)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC-CSSCEEEEEECSTTEEEEEESSSEEEEEETT--T
T ss_pred cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC-CCCceEEEEECCCCEEEEEeCCCeEEEEECC--C
Confidence 45666654333 5444 33 3579999999876654431111 1233555544 57899999877777776553 3
Q ss_pred Ce-EEEEec-----------------------cCCceeEEEEEEEeCC-eEE-EEcCCCcEEEEee
Q psy17021 157 NQ-LLIFAD-----------------------DTQPRWITTSCVLDYN-TVA-SADKFGNVCIVST 196 (199)
Q Consensus 157 ~~-l~~var-----------------------D~~~~wvta~~~Ld~~-t~l-~aD~~gNl~vlr~ 196 (199)
++ +..+.- +....+++++.+..++ .++ +++.++.+.++.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 272 GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 33 332221 1234678888887544 444 4448899999987
No 49
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.59 E-value=0.24 Score=41.73 Aligned_cols=186 Identities=10% Similarity=0.060 Sum_probs=93.4
Q ss_pred eEEecCCCccee--ecccCCEEEEeec--CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEE-C------
Q psy17021 4 VHKTSVDEVPYA--MCPFQGALLVGVG--RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV-G------ 72 (199)
Q Consensus 4 ~h~t~~~~~~~~--~~~f~~~ll~~~~--~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v-g------ 72 (199)
+...+....|.+ +.+ .++++++.+ +.+++||+...++++...... .+.....+.......++++++ +
T Consensus 116 ~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~s~~~d~~v 193 (433)
T 3bws_A 116 ISRFKTGFQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEK-YKKKLGFVETISIPEHNELWVSQMQANAV 193 (433)
T ss_dssp EEEEECSSCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHH-HHTTCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred EEEEcCCCCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCccc-ccccCCceeEEEEcCCCEEEEEECCCCEE
Confidence 344444555543 445 788888775 459999997766654211100 000000111111112233322 1
Q ss_pred -----CeeeEEEeec-cCCcceEEccc--cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEE
Q psy17021 73 -----NAMEFVHKTS-VDEVPYAMCPF--QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYV 140 (199)
Q Consensus 73 -----dklesVh~~~-~kG~v~aL~~f--~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlV 140 (199)
+..+.+.... -...+.++.-- ...++++- ++.|++|++...+.+..... +..+.++.. .++++++
T Consensus 194 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~ 270 (433)
T 3bws_A 194 HVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK---IGLPRGLLLSKDGKELYI 270 (433)
T ss_dssp EEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC---CSEEEEEEECTTSSEEEE
T ss_pred EEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC---CCCceEEEEcCCCCEEEE
Confidence 1122222222 23345554322 23454444 58999999987665443222 334666665 4668888
Q ss_pred Eeccc------cEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCC-eE-EEEcCCCcEEEEee
Q psy17021 141 SDVQE------SVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYN-TV-ASADKFGNVCIVST 196 (199)
Q Consensus 141 GD~~~------Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~-t~-l~aD~~gNl~vlr~ 196 (199)
++... .=.+..|+...++....... +..++++.+-.++ .+ +.+..++.+.++..
T Consensus 271 ~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 271 AQFSASNQESGGGRLGIYSMDKEKLIDTIGP--PGNKRHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp EEEESCTTCSCCEEEEEEETTTTEEEEEEEE--EECEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred EECCCCccccCCCeEEEEECCCCcEEeeccC--CCCcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 87532 11355566655555443321 2355666665333 44 44467777777754
No 50
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.58 E-value=0.26 Score=41.38 Aligned_cols=168 Identities=13% Similarity=0.104 Sum_probs=91.8
Q ss_pred CCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEEC-----------CeeeEEEe-eccCC
Q psy17021 20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVG-----------NAMEFVHK-TSVDE 85 (199)
Q Consensus 20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vg-----------dklesVh~-~~~kG 85 (199)
..+|+.|.+ +.+++||+...++++.-... ...++ .+..... .+..++.| +.-+.+.. ....+
T Consensus 166 ~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h---~~~v~-~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~ 241 (354)
T 2pbi_B 166 DMQILTASGDGTCALWDVESGQLLQSFHGH---GADVL-CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES 241 (354)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECC---SSCEE-EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEcCC---CCCeE-EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC
Confidence 446777766 78999999887766532211 01110 0011111 11233332 11122222 23456
Q ss_pred cceEEccc-cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEE
Q psy17021 86 VPYAMCPF-QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLL 160 (199)
Q Consensus 86 ~v~aL~~f-~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~ 160 (199)
.++++.-. +|..+|. ...+|++|++...+.+...........+.++.- .+.++++|..-..+.++.... ...+.
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~ 320 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK-GSRVS 320 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CSEEE
T ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC-CceEE
Confidence 77776533 3444433 368999999976543332222111123445543 478999999888888875432 23333
Q ss_pred EEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEE
Q psy17021 161 IFADDTQPRWITTSCVL-DYNTVASADKFGNVCIV 194 (199)
Q Consensus 161 ~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vl 194 (199)
.+. ....+++++.+- |...++.+..++.+.++
T Consensus 321 ~l~--~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 321 ILF--GHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp EEC--CCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EEE--CCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 333 235688899887 44578888999988775
No 51
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.58 E-value=0.23 Score=40.52 Aligned_cols=111 Identities=13% Similarity=0.065 Sum_probs=69.3
Q ss_pred CCcceEEccc-cC-eEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCe
Q psy17021 84 DEVPYAMCPF-QG-ALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQ 158 (199)
Q Consensus 84 kG~v~aL~~f-~g-~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~ 158 (199)
.+++++++-- +| .|+++- .+.|++|++...+.+..-... ...+.++. ..+.++++| .-.++.++..+...++
T Consensus 202 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~ 278 (372)
T 1k8k_C 202 CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE--TLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGK 278 (372)
T ss_dssp SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS--SCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTE
T ss_pred CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC--CCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCce
Confidence 4566665543 34 444443 678999999776654443322 12344444 456677777 6778888888762233
Q ss_pred EEEE--------------------------------------eccCCceeEEEEEEEeC-----CeEEEEcCCCcEEEEe
Q psy17021 159 LLIF--------------------------------------ADDTQPRWITTSCVLDY-----NTVASADKFGNVCIVS 195 (199)
Q Consensus 159 l~~v--------------------------------------arD~~~~wvta~~~Ld~-----~t~l~aD~~gNl~vlr 195 (199)
+..+ -.......|+++++... ..++.+..+|.+.+.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 279 LSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp EEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred EEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 2221 11244568999987744 5788899999999987
Q ss_pred ec
Q psy17021 196 TY 197 (199)
Q Consensus 196 ~~ 197 (199)
+.
T Consensus 359 ~~ 360 (372)
T 1k8k_C 359 VR 360 (372)
T ss_dssp HH
T ss_pred ec
Confidence 53
No 52
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.58 E-value=0.22 Score=40.27 Aligned_cols=113 Identities=14% Similarity=0.031 Sum_probs=69.6
Q ss_pred cCCcceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccE------------
Q psy17021 83 VDEVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESV------------ 147 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv------------ 147 (199)
..+++.++.-- +|. |+++- .+.|++|++...+.+...... .+.........+.++++|....+.
T Consensus 217 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 295 (369)
T 3zwl_B 217 HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD-CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKF 295 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS-SCEEEEEECSSSSEEEEEECCC-------------C
T ss_pred CCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC-CCceeEEecCCCceEEEeecCCCceEEEEecCCCcc
Confidence 45667765533 344 44443 689999999887765554432 233334444467899998877643
Q ss_pred EEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 148 FLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 148 ~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
.+.-|+....+....-.. ....++++.+- |...++.+..+|.+.++.+.
T Consensus 296 ~i~~~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 296 EARFYHKIFEEEIGRVQG-HFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp EEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred eeEEEecCCCcchhheec-ccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 334444444443333332 24578888887 44578889999999998765
No 53
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.57 E-value=0.15 Score=43.05 Aligned_cols=115 Identities=14% Similarity=0.062 Sum_probs=63.0
Q ss_pred cCCcceEEccc-cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEE---eccccEEEEEEeC
Q psy17021 83 VDEVPYAMCPF-QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVS---DVQESVFLVRYKR 154 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVG---D~~~Sv~ll~y~~ 154 (199)
..+.++++.-- +|. |+++ -.++|++|++...+.+...........+..+. ..+.++++| ..-..+.++....
T Consensus 175 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 175 HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKH 254 (402)
T ss_dssp CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTB
T ss_pred CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcc
Confidence 56677776533 454 4444 36899999998776544331111111133333 345677777 4555666655433
Q ss_pred CCCeEEEEeccCCceeEEEEEEEeCC-eE-EEEcCCCcEEEEeecC
Q psy17021 155 YENQLLIFADDTQPRWITTSCVLDYN-TV-ASADKFGNVCIVSTYR 198 (199)
Q Consensus 155 ~~~~l~~varD~~~~wvta~~~Ld~~-t~-l~aD~~gNl~vlr~~~ 198 (199)
....+....-+ ...+++++.+-.++ .+ +++..+++|.++.+..
T Consensus 255 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 255 LEEPLSLQELD-TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp CSSCSEEEECC-CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred ccCCceEEecc-CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 22212222222 23457777776443 44 4567799999987653
No 54
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.57 E-value=0.26 Score=40.88 Aligned_cols=173 Identities=13% Similarity=0.076 Sum_probs=98.2
Q ss_pred eeecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEEC-----------CeeeEEEe
Q psy17021 14 YAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVG-----------NAMEFVHK 80 (199)
Q Consensus 14 ~~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vg-----------dklesVh~ 80 (199)
.++.+-...|++|.. +.+++||+...+....-+.. ...+ ..+.-. .+..++.| ...+.++.
T Consensus 128 ~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~---~~~v---~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 128 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR---GKFI---LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 201 (321)
T ss_dssp EEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECS---SSCE---EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCC---CceE---EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 445555556666654 78999998665433322111 0111 111111 11222322 12233333
Q ss_pred e-ccCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeC
Q psy17021 81 T-SVDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKR 154 (199)
Q Consensus 81 ~-~~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~ 154 (199)
. ...+++++++-- +|++|++. ..+|++|++...++.....- -...+.++.- .+.+++.|..-.+|.+...
T Consensus 202 ~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~-- 277 (321)
T 3ow8_A 202 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG--HASWVLNVAFCPDDTHFVSSSSDKSVKVWDV-- 277 (321)
T ss_dssp ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEET--
T ss_pred EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC--CCCceEEEEECCCCCEEEEEeCCCcEEEEeC--
Confidence 3 245566665432 45555443 47899999987665443221 2234666665 4678999988888887754
Q ss_pred CCCeEEEEeccCCceeEEEEEEEe-CCeEEEEcCCCcEEEEeec
Q psy17021 155 YENQLLIFADDTQPRWITTSCVLD-YNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 155 ~~~~l~~varD~~~~wvta~~~Ld-~~t~l~aD~~gNl~vlr~~ 197 (199)
...+....-.+ ....|+++.+-. ...++.+..++.+.++.+|
T Consensus 278 ~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 278 GTRTCVHTFFD-HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCCEEEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 34443333233 345688888874 4578888999999999887
No 55
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.53 E-value=0.15 Score=43.01 Aligned_cols=171 Identities=13% Similarity=0.104 Sum_probs=87.5
Q ss_pred CCEEEEeec-CeeEEEecchhhhhhhhhhcc-cccCceeeeeEEEEE-cCceeEECC-----------eeeEEEee-ccC
Q psy17021 20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKV-RIKGFRKAHQTHTHS-GRSDRLVGN-----------AMEFVHKT-SVD 84 (199)
Q Consensus 20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~-~~~~~~~~~~~~~~~-~~~ri~vgd-----------klesVh~~-~~k 84 (199)
.+++|+|.+ +.+++||+-.++.+....... .....+ ..+.-. .+.+++.|. ..+.+... .-.
T Consensus 105 d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V---~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~ 181 (357)
T 4g56_B 105 EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIV---KTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS 181 (357)
T ss_dssp TTEEEEEETTSCEEEC--------CCCCEEECCCSSCE---EEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCE---EEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC
Confidence 467777766 889999986655443211110 011222 122111 223343321 12222222 235
Q ss_pred CcceEEcc--ccCeEEE--EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---CCEEEEEeccccEEEEEEeCCCC
Q psy17021 85 EVPYAMCP--FQGALLV--GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---GHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 85 G~v~aL~~--f~g~LLa--avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
++++++.- -.+.+++ +-.++|++|++...+.............+.++... +.++++|+.-..|.++.....+
T Consensus 182 ~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~- 260 (357)
T 4g56_B 182 SEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD- 260 (357)
T ss_dssp SCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG-
T ss_pred CCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCc-
Confidence 67777643 2333433 33689999999776544433322223457777753 5688899988888887654322
Q ss_pred eEEEEeccCCceeEEEEEEE-eCCe-EEEEcCCCcEEEEee
Q psy17021 158 QLLIFADDTQPRWITTSCVL-DYNT-VASADKFGNVCIVST 196 (199)
Q Consensus 158 ~l~~varD~~~~wvta~~~L-d~~t-~l~aD~~gNl~vlr~ 196 (199)
.+..+. .....++++.+- |... ++.+..++.+.++..
T Consensus 261 ~~~~~~--~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~ 299 (357)
T 4g56_B 261 SAQTSA--VHSQNITGLAYSYHSSPFLASISEDCTVAVLDA 299 (357)
T ss_dssp GCEEEC--CCSSCEEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred EeEEEe--ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEEC
Confidence 222222 344578888886 4444 556788899888754
No 56
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.48 E-value=0.32 Score=40.86 Aligned_cols=174 Identities=10% Similarity=0.090 Sum_probs=96.0
Q ss_pred eecccCCEEEEeecCeeEEEecchhhhhhhhhhc-c---cccCceeeeeEEEEEcCcee--EECCeeeEEEeeccCCcce
Q psy17021 15 AMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK-V---RIKGFRKAHQTHTHSGRSDR--LVGNAMEFVHKTSVDEVPY 88 (199)
Q Consensus 15 ~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~-~---~~~~~~~~~~~~~~~~~~ri--~vgdklesVh~~~~kG~v~ 88 (199)
++.+-...|.+|..+.+++||+...+.+...+.. . .+... ...+.+...+.+.+ .--..-+.+....+.+++.
T Consensus 26 ~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~ 104 (355)
T 3vu4_A 26 EFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHR-TNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVK 104 (355)
T ss_dssp EECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTT-SSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEE
T ss_pred EECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCC-CCEEEEEECCccEEEEEECCCCcEEEEEECCCceE
Confidence 3345556677777788999997654433322111 0 00000 00111111111122 2223345566667888999
Q ss_pred EEccccCeEEEEeCCEEEEEEcCCc-ceeeeeeccCcCceEEEEEEeCCEEEE--EeccccEEEEEEeCCC---------
Q psy17021 89 AMCPFQGALLVGVGRYLRLYDLGKK-KLLRKCENKHLPNLIVKIESMGHRIYV--SDVQESVFLVRYKRYE--------- 156 (199)
Q Consensus 89 aL~~f~g~LLaavg~~v~vy~l~~~-~Ll~~~~~~~~~~~i~~l~~~~~~IlV--GD~~~Sv~ll~y~~~~--------- 156 (199)
++..-.+.++++..+++++|++... +.+..... +..+..+.. +++++ |..-..|.++..+...
T Consensus 105 ~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~ 179 (355)
T 3vu4_A 105 DLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV 179 (355)
T ss_dssp EEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC-----------
T ss_pred EEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccc
Confidence 9887777888999999999999876 43332111 223334432 66666 5666677776654321
Q ss_pred --Ce----EEEEeccCCceeEEEEEEE-eCCeEEEEcCCCc-EEEEee
Q psy17021 157 --NQ----LLIFADDTQPRWITTSCVL-DYNTVASADKFGN-VCIVST 196 (199)
Q Consensus 157 --~~----l~~varD~~~~wvta~~~L-d~~t~l~aD~~gN-l~vlr~ 196 (199)
.. +..+ ......++++.+- |...++.+..++. +.+..+
T Consensus 180 ~~~~~~p~~~~~--~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 180 QQKAILGKGVLI--KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKT 225 (355)
T ss_dssp -------CCEEE--CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEET
T ss_pred cccccCcccEEE--EccCCceEEEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 00 2222 2335578888886 4446778888888 877654
No 57
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.47 E-value=0.24 Score=42.05 Aligned_cols=172 Identities=13% Similarity=0.159 Sum_probs=92.0
Q ss_pred ccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEEC--C---------eeeEEEeeccC
Q psy17021 18 PFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVG--N---------AMEFVHKTSVD 84 (199)
Q Consensus 18 ~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vg--d---------klesVh~~~~k 84 (199)
+-...|+.|.. +.+++||+...+.++.-..- ...+ ..+.-. .+..++.| | .-+........
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h---~~~v---~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~ 206 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIENRKIVMILQGH---EQDI---YSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE 206 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCC---SSCE---EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEccC---CCCE---EEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC
Confidence 33344554443 78999999876655432211 1111 111111 12233332 1 12233334455
Q ss_pred CcceEEc--cccCeEEEEe--CCEEEEEEcCCcceeeeeec-----cCcCceEEEEEE--eCCEEEEEeccccEEEEEEe
Q psy17021 85 EVPYAMC--PFQGALLVGV--GRYLRLYDLGKKKLLRKCEN-----KHLPNLIVKIES--MGHRIYVSDVQESVFLVRYK 153 (199)
Q Consensus 85 G~v~aL~--~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~-----~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~ 153 (199)
+.+.++. |-+|+++++. .++|++|+....+++..... ......+.++.. .+.+++.|..-.+|.++..+
T Consensus 207 ~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 207 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 6666654 3356655443 68899999987665443211 111124666665 46799999998899888764
Q ss_pred CCCC----------eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 154 RYEN----------QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 154 ~~~~----------~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
.... ..... -.....+++++.+- |...++.+..++.+.++..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 287 NANNKSDSKTPNSGTCEVT-YIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp --------------CEEEE-EECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred CCCCcccccCCCCCcceEE-EecccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 3211 11111 11234578888887 4446778888888887753
No 58
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.43 E-value=0.33 Score=40.52 Aligned_cols=174 Identities=9% Similarity=0.008 Sum_probs=99.9
Q ss_pred CCCcceeecccCCEEEEeec--CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECC------------e
Q psy17021 9 VDEVPYAMCPFQGALLVGVG--RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGN------------A 74 (199)
Q Consensus 9 ~~~~~~~~~~f~~~ll~~~~--~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgd------------k 74 (199)
+.+.|..|+...++|.++.. +.+.++|....++++.-..- ..+..+ ....++++|+.+ .
T Consensus 42 lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~----~~p~~i---~~~~~g~lyv~~~~~~~v~~iD~~t 114 (328)
T 3dsm_A 42 LGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGF----TSPRYI---HFLSDEKAYVTQIWDYRIFIINPKT 114 (328)
T ss_dssp CBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECC----SSEEEE---EEEETTEEEEEEBSCSEEEEEETTT
T ss_pred cCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCC----CCCcEE---EEeCCCeEEEEECCCCeEEEEECCC
Confidence 44678888889999988876 68999998765555543211 222211 111123665543 1
Q ss_pred eeEEEeeccCC------cceEEccccCeEEEEe---CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEecc
Q psy17021 75 MEFVHKTSVDE------VPYAMCPFQGALLVGV---GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQ 144 (199)
Q Consensus 75 lesVh~~~~kG------~v~aL~~f~g~LLaav---g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~ 144 (199)
.+.....+... .+..+..-.++|.++- +++|.+++....++++..... ..+..+... ++++++++.-
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g---~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIG---IQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECS---SCBCCCEECTTSEEEEEBCC
T ss_pred CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC---CCccceEEcCCCCEEEEECC
Confidence 22222233333 4555555566887773 688999999877665544332 123334432 4568888775
Q ss_pred c---------cEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEE
Q psy17021 145 E---------SVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIV 194 (199)
Q Consensus 145 ~---------Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vl 194 (199)
. +-.+.++++..+++...-.=....+..++.+- |.+.+.+++. .++++
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~ 249 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRM 249 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEE
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEE
Confidence 5 46788888887776532211011255555554 4556777776 55544
No 59
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.38 E-value=0.24 Score=42.00 Aligned_cols=112 Identities=10% Similarity=0.084 Sum_probs=69.9
Q ss_pred cCCcceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe------CCEEEEEeccccEEEEEEe
Q psy17021 83 VDEVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM------GHRIYVSDVQESVFLVRYK 153 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~------~~~IlVGD~~~Sv~ll~y~ 153 (199)
-.+++++++-- +|+ |++|- .++|++|++...+.++..... ....+.++... +.+++.|..-..|.++..
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~- 290 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG-DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF- 290 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT-TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET-
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC-CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc-
Confidence 35788876532 344 44343 678999999887765543332 23456777443 337777776666766654
Q ss_pred CCCCeEEEEec-------------------------cCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 154 RYENQLLIFAD-------------------------DTQPRWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 154 ~~~~~l~~var-------------------------D~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
..++....-. +....+++++.+-|...++.+..+++|.++.+.
T Consensus 291 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 291 -VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp -TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETT
T ss_pred -CCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECC
Confidence 3333322222 124556888888866678999999999988653
No 60
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.28 E-value=0.48 Score=40.79 Aligned_cols=116 Identities=10% Similarity=0.025 Sum_probs=69.6
Q ss_pred cCCcceEEccccCeEEEE--eCCEEEEEEcCCcceeeeeecc-----------------------CcCceEEEEEEe--C
Q psy17021 83 VDEVPYAMCPFQGALLVG--VGRYLRLYDLGKKKLLRKCENK-----------------------HLPNLIVKIESM--G 135 (199)
Q Consensus 83 ~kG~v~aL~~f~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~-----------------------~~~~~i~~l~~~--~ 135 (199)
..+++++++--+|++|+. -.++|++|++...+++...... .....+.++... +
T Consensus 240 h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 240 HKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp CSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 446667654335655543 3579999999876644432210 012346666654 6
Q ss_pred CEEEEEe-ccccEEEEEE-eCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCC-------CcEEEEeecC
Q psy17021 136 HRIYVSD-VQESVFLVRY-KRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF-------GNVCIVSTYR 198 (199)
Q Consensus 136 ~~IlVGD-~~~Sv~ll~y-~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~-------gNl~vlr~~~ 198 (199)
+++++|- --.+|.++.. ++..+++..+..=..+..++++.+-.+..++.+|.. .+|-++++++
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred CEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 7888887 6778999888 344444544433323367888888775567776653 3456665543
No 61
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.27 E-value=0.43 Score=43.23 Aligned_cols=118 Identities=14% Similarity=0.112 Sum_probs=77.4
Q ss_pred EeeccCCcceEEccc-cCeEEEEe--CCEEEEEEcCC-cceeeeeeccCcC-ceEEEEEE--eCCEEEEEeccccEEEEE
Q psy17021 79 HKTSVDEVPYAMCPF-QGALLVGV--GRYLRLYDLGK-KKLLRKCENKHLP-NLIVKIES--MGHRIYVSDVQESVFLVR 151 (199)
Q Consensus 79 h~~~~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~-~~Ll~~~~~~~~~-~~i~~l~~--~~~~IlVGD~~~Sv~ll~ 151 (199)
......+.++++.-- +|+.||+. ..++++|++.. .++....... .+ ..|.++.- .+.+++.|..-.+|.+..
T Consensus 486 ~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~-~H~~~V~~v~fspdg~~lasgs~D~~v~lW~ 564 (611)
T 1nr0_A 486 KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWT-FHTAKVACVSWSPDNVRLATGSLDNSVIVWN 564 (611)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeee-ecccceeEEEECCCCCEEEEEECCCcEEEEE
Confidence 334556777775422 45555443 68899999975 4443321221 12 23666664 467999999999999988
Q ss_pred EeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 152 YKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 152 y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
.+........+-..+...+|+++.|.+++.++.+..++.+.+..+|
T Consensus 565 ~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 565 MNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 610 (611)
T ss_dssp TTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred CCCcccccchhhccCcccCeeEEEEcCCCEEEEecCCCCEEEEecc
Confidence 7543333322323333679999999988888889999999988764
No 62
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.27 E-value=0.3 Score=40.72 Aligned_cols=181 Identities=12% Similarity=0.001 Sum_probs=99.0
Q ss_pred eEEecCCCcceeecc-cCCEEEEee--cCeeEEEecchhhhhhhhhhcccc---cCceeeeeEEEEEcCceeEECCe---
Q psy17021 4 VHKTSVDEVPYAMCP-FQGALLVGV--GRYLRLYDLGKKKLLRKCENKVRI---KGFRKAHQTHTHSGRSDRLVGNA--- 74 (199)
Q Consensus 4 ~h~t~~~~~~~~~~~-f~~~ll~~~--~~~l~~y~~g~k~ll~k~~~~~~~---~~~~~~~~~~~~~~~~ri~vgdk--- 74 (199)
+++-+....|..++. -.|+|.|+- ++.+.+||+...++.+.-+.- .. ...+..+.. .++++++++.
T Consensus 77 ~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g-~~~~~~~~p~~i~~----~~~~lyv~~~~~~ 151 (328)
T 3dsm_A 77 VGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECP-DMDMESGSTEQMVQ----YGKYVYVNCWSYQ 151 (328)
T ss_dssp EEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECT-TCCTTTCBCCCEEE----ETTEEEEEECTTC
T ss_pred EEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcC-CccccCCCcceEEE----ECCEEEEEcCCCC
Confidence 344444567888776 678999988 689999999877666533221 10 002222211 2455555421
Q ss_pred ----------eeEEEeeccCCcceEEccc-cCeEEEEeC------------CEEEEEEcCCcceeeeeeccCcCceEEEE
Q psy17021 75 ----------MEFVHKTSVDEVPYAMCPF-QGALLVGVG------------RYLRLYDLGKKKLLRKCENKHLPNLIVKI 131 (199)
Q Consensus 75 ----------lesVh~~~~kG~v~aL~~f-~g~LLaavg------------~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l 131 (199)
.+.+...+....+..+..- +|++.++.. +.|.+++....++.+..... ....+..+
T Consensus 152 ~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~-~g~~p~~l 230 (328)
T 3dsm_A 152 NRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK-LGDWPSEV 230 (328)
T ss_dssp CEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC-TTCCCEEE
T ss_pred CEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC-CCCCceeE
Confidence 1222223333334443322 478777664 47999998777665443332 11235556
Q ss_pred EEe--CCEEEEEeccccEEEEEEeCCCCeEEE--EeccCCceeEEEEEEE-eCCeEEEEc-----CCCcEEEEe
Q psy17021 132 ESM--GHRIYVSDVQESVFLVRYKRYENQLLI--FADDTQPRWITTSCVL-DYNTVASAD-----KFGNVCIVS 195 (199)
Q Consensus 132 ~~~--~~~IlVGD~~~Sv~ll~y~~~~~~l~~--varD~~~~wvta~~~L-d~~t~l~aD-----~~gNl~vlr 195 (199)
... ++++++.|- .+..|+.+.+++.. +..+ ...+..++.+= +++.+.++| ..+.+.++.
T Consensus 231 a~~~d~~~lyv~~~----~v~~~d~~t~~~~~~~~~~~-~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 231 QLNGTRDTLYWINN----DIWRMPVEADRVPVRPFLEF-RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp EECTTSCEEEEESS----SEEEEETTCSSCCSSCSBCC-CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred EEecCCCEEEEEcc----EEEEEECCCCceeeeeeecC-CCCceEEEEEcCCCCeEEEEcccccccCCEEEEEC
Confidence 554 789999886 55678877666521 1111 12345555543 245677777 344455543
No 63
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.26 E-value=0.35 Score=39.06 Aligned_cols=110 Identities=12% Similarity=0.068 Sum_probs=65.3
Q ss_pred cCCcceEEc--cccCeEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021 83 VDEVPYAMC--PFQGALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 83 ~kG~v~aL~--~f~g~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
..+.++++. |-...|++| ...++++|++...+.+..-... ...+.++.. .++++++|..-..+.++.. ..+
T Consensus 106 ~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~--~~~ 181 (312)
T 4ery_A 106 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASG 181 (312)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC--SSCEEEEEECTTSSEEEEEETTSCEEEEET--TTC
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC--CCcEEEEEEcCCCCEEEEEeCCCcEEEEEC--CCC
Confidence 345555543 322344433 3688999999876644332211 223555554 4679999998888877654 333
Q ss_pred eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
+....-.......++++.+- |...++.+..++.+.++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~ 221 (312)
T 4ery_A 182 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 221 (312)
T ss_dssp CEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred ceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 33222223334456666665 4447888888999888764
No 64
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.23 E-value=0.37 Score=39.10 Aligned_cols=97 Identities=4% Similarity=0.050 Sum_probs=62.6
Q ss_pred eCCEEEEEEcCCcc--eeeeeeccCcCceEEEEEEe-----CCEEEEEeccccEEEEEEeCCCC--eEEEEeccCCceeE
Q psy17021 101 VGRYLRLYDLGKKK--LLRKCENKHLPNLIVKIESM-----GHRIYVSDVQESVFLVRYKRYEN--QLLIFADDTQPRWI 171 (199)
Q Consensus 101 vg~~v~vy~l~~~~--Ll~~~~~~~~~~~i~~l~~~-----~~~IlVGD~~~Sv~ll~y~~~~~--~l~~varD~~~~wv 171 (199)
..++|++|++...+ ......+..-...|.++.-. +++++.|..-.+|.+...+.... ....+.....+.++
T Consensus 178 ~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v 257 (297)
T 2pm7_B 178 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL 257 (297)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE
T ss_pred CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcE
Confidence 46899999996533 11122233112347777653 35888998888999988765432 22233223446788
Q ss_pred EEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 172 TTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 172 ta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
.++.+- |...++.+..++.+.+.+.+
T Consensus 258 ~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 258 WRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 888887 44567788889999998765
No 65
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.23 E-value=0.38 Score=39.19 Aligned_cols=173 Identities=10% Similarity=0.034 Sum_probs=92.4
Q ss_pred eecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEE-EEcCceeEECC-----------eeeE-EEe
Q psy17021 15 AMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHT-HSGRSDRLVGN-----------AMEF-VHK 80 (199)
Q Consensus 15 ~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~-~~~~~ri~vgd-----------kles-Vh~ 80 (199)
++.+-...|+.|.. +.+++||+...+.++.-.... ..+ .... ...+..++.|. .-+. ..+
T Consensus 20 ~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~---~~v---~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 93 (304)
T 2ynn_A 20 DFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTE---TPV---RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF 93 (304)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS---SCE---EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccC---CcE---EEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence 33455556666654 789999998766655332210 111 1111 11122233221 1122 223
Q ss_pred eccCCcceEEcccc-C-eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---CCEEEEEeccccEEEEEEeC
Q psy17021 81 TSVDEVPYAMCPFQ-G-ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---GHRIYVSDVQESVFLVRYKR 154 (199)
Q Consensus 81 ~~~kG~v~aL~~f~-g-~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD~~~Sv~ll~y~~ 154 (199)
..-.+.++++.--. + .|+.| -.++|++|++....-+... +..-...+.++.-. +++++.|..-.+|.++....
T Consensus 94 ~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 94 EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT-FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEE-ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhh-hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 34556777765332 3 44433 3689999999765322222 22122347777753 46899999888888876543
Q ss_pred CCCeEEEEeccCCceeEEEEEEE---eCCeEEEEcCCCcEEEEee
Q psy17021 155 YENQLLIFADDTQPRWITTSCVL---DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 155 ~~~~l~~varD~~~~wvta~~~L---d~~t~l~aD~~gNl~vlr~ 196 (199)
....+... ......+.++.+. |...++.+..++.+.+..+
T Consensus 173 ~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~ 215 (304)
T 2ynn_A 173 STPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDY 215 (304)
T ss_dssp SSCSEEEE--CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEET
T ss_pred CCccceec--cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeC
Confidence 33333332 2233445555554 3346788888888887754
No 66
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.20 E-value=0.51 Score=40.40 Aligned_cols=95 Identities=14% Similarity=0.136 Sum_probs=61.0
Q ss_pred EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEE
Q psy17021 97 LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITT 173 (199)
Q Consensus 97 LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta 173 (199)
|++|- .++|++|++...+.+..-.- -...+.++.. .+.+++.|.--..|.++.++.. ..+..+. ....+|++
T Consensus 311 l~sgs~D~~i~iwd~~~~~~~~~~~~--h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~-~~~~~~~--~h~~~v~~ 385 (410)
T 1vyh_C 311 LLSGSRDKTIKMWDVSTGMCLMTLVG--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK-RCMKTLN--AHEHFVTS 385 (410)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS-CCCEEEE--CCSSCEEE
T ss_pred EEEEeCCCeEEEEECCCCceEEEEEC--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-ceEEEEc--CCCCcEEE
Confidence 44333 57899999987664443221 1234666654 4678999988888888766432 2333333 23457889
Q ss_pred EEEEeC-CeEEEEcCCCcEEEEee
Q psy17021 174 SCVLDY-NTVASADKFGNVCIVST 196 (199)
Q Consensus 174 ~~~Ld~-~t~l~aD~~gNl~vlr~ 196 (199)
+.+-.+ ..++.+..++.+.++.+
T Consensus 386 l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 386 LDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEcCCCCEEEEEeCCCcEEEEeC
Confidence 988744 46888889999888753
No 67
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.20 E-value=0.4 Score=40.48 Aligned_cols=113 Identities=11% Similarity=0.106 Sum_probs=68.8
Q ss_pred cCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeecc----C-cCceEEEE--EEeCCEEEEEeccccEEEEEE
Q psy17021 83 VDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENK----H-LPNLIVKI--ESMGHRIYVSDVQESVFLVRY 152 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~----~-~~~~i~~l--~~~~~~IlVGD~~~Sv~ll~y 152 (199)
.+++++++.-. +|..++.. ..+|++|++...+.+...... + ....+.++ ...+.++++|..-..+.++.
T Consensus 248 h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd- 326 (380)
T 3iz6_a 248 HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWD- 326 (380)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEE-
T ss_pred cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEE-
Confidence 45677776543 34544443 579999999876543322111 0 01123344 34688999998877877764
Q ss_pred eCCCCe-EEEEec--cCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 153 KRYENQ-LLIFAD--DTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 153 ~~~~~~-l~~var--D~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
....+ +..+.. .....+++++.+- |...++.+..++++.+..+.
T Consensus 327 -~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 327 -TLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp -TTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred -CCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 33333 333322 3345678888887 44578888999999988764
No 68
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.18 E-value=0.4 Score=39.04 Aligned_cols=92 Identities=5% Similarity=-0.103 Sum_probs=52.3
Q ss_pred eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEe
Q psy17021 101 VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLD 178 (199)
Q Consensus 101 vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld 178 (199)
-.++|++|++...+.+....-. ...+.++.. .+.+++.|..-..|.+.. ....++...-. ....++.++++-.
T Consensus 206 ~D~~i~iWd~~~~~~~~~~~~h--~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd--~~~~~~~~~~~-~~~~~~~~~~~~~ 280 (304)
T 2ynn_A 206 DDLTIKIWDYQTKSCVATLEGH--MSNVSFAVFHPTLPIIISGSEDGTLKIWN--SSTYKVEKTLN-VGLERSWCIATHP 280 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEECC--SSCEEEEEECSSSSEEEEEETTSCEEEEE--TTTCCEEEEEC-CSSSSEEEEEECT
T ss_pred CCCeEEEEeCCCCccceeeCCC--CCCEEEEEECCCCCEEEEEcCCCeEEEEE--CCCCceeeecc-CCCccEEEEEECC
Confidence 3689999999877654433221 123555543 467899999888888765 34444433222 2234555666553
Q ss_pred CC--eEEEEcCCCcEEEEeec
Q psy17021 179 YN--TVASADKFGNVCIVSTY 197 (199)
Q Consensus 179 ~~--t~l~aD~~gNl~vlr~~ 197 (199)
++ .++++-.+..+.++.+.
T Consensus 281 ~~~~~~~asg~~~g~~~~~~~ 301 (304)
T 2ynn_A 281 TGRKNYIASGFDNGFTVLSLG 301 (304)
T ss_dssp TCGGGCEEEEETTEEEEEECC
T ss_pred CCCceEEEEecCCceEEEEec
Confidence 33 34444444455665543
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.16 E-value=0.41 Score=38.99 Aligned_cols=95 Identities=6% Similarity=-0.056 Sum_probs=65.2
Q ss_pred CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCe-EEEEeccCCceeEEEEEEE-
Q psy17021 102 GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQ-LLIFADDTQPRWITTSCVL- 177 (199)
Q Consensus 102 g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~-l~~varD~~~~wvta~~~L- 177 (199)
..+|++|++...+.............+.++.. .++++++|+--..+.++.++..... ....-.......++++.+-
T Consensus 73 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 73 DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred CCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence 57899999977664444332222334666665 4779999999899999988765542 2222223446688898887
Q ss_pred eCCeEEEEcCCCcEEEEee
Q psy17021 178 DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 178 d~~t~l~aD~~gNl~vlr~ 196 (199)
|.+.++.+..++.+.++.+
T Consensus 153 ~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 153 NSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp TSSEEEEEETTSCEEEEEC
T ss_pred CCCEEEEEcCCCCEEEEEc
Confidence 4457888899999998873
No 70
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.12 E-value=0.21 Score=43.03 Aligned_cols=111 Identities=13% Similarity=0.044 Sum_probs=70.2
Q ss_pred cCCcceEEcc--ccCeEEEEe--CCEEEEEEcCCc---ceeeeeeccCcCceEEEEEEe--CC-EEEEEeccccEEEEEE
Q psy17021 83 VDEVPYAMCP--FQGALLVGV--GRYLRLYDLGKK---KLLRKCENKHLPNLIVKIESM--GH-RIYVSDVQESVFLVRY 152 (199)
Q Consensus 83 ~kG~v~aL~~--f~g~LLaav--g~~v~vy~l~~~---~Ll~~~~~~~~~~~i~~l~~~--~~-~IlVGD~~~Sv~ll~y 152 (199)
..+.+.++.- ..+.++++. .++|++|++... +..... ......+.++... +. ++++|..-..|.++.+
T Consensus 230 h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~ 307 (430)
T 2xyi_A 230 HTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV--DAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 307 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE--ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred CCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe--ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeC
Confidence 3445666543 345565443 689999999754 222221 1122346666653 43 7889999888988877
Q ss_pred eCCCCeEEEEeccCCceeEEEEEEEeCC--eEEEEcCCCcEEEEeec
Q psy17021 153 KRYENQLLIFADDTQPRWITTSCVLDYN--TVASADKFGNVCIVSTY 197 (199)
Q Consensus 153 ~~~~~~l~~varD~~~~wvta~~~Ld~~--t~l~aD~~gNl~vlr~~ 197 (199)
+.....+..+.. ...+++++++-.++ .++.+..++.+.++.+.
T Consensus 308 ~~~~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 308 RNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp TCTTSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred CCCCCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 653443444433 35688899888544 47788888999888764
No 71
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.09 E-value=0.27 Score=40.62 Aligned_cols=79 Identities=10% Similarity=0.100 Sum_probs=47.5
Q ss_pred cCCcceEEccc-cC-eEEEEeCCEEEEEEcCCcceeee-eecc--CcC--ceEEEEEEeCCEEEEEec-cccEEEEEEeC
Q psy17021 83 VDEVPYAMCPF-QG-ALLVGVGRYLRLYDLGKKKLLRK-CENK--HLP--NLIVKIESMGHRIYVSDV-QESVFLVRYKR 154 (199)
Q Consensus 83 ~kG~v~aL~~f-~g-~LLaavg~~v~vy~l~~~~Ll~~-~~~~--~~~--~~i~~l~~~~~~IlVGD~-~~Sv~ll~y~~ 154 (199)
-.++++++.-- +| .|++|-..+|++|++.+.+.... ..+. ..+ ......+..+.++++|.. -.++.++.|+.
T Consensus 213 h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 213 EEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp TTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 36777776532 34 46666677999999976543221 1110 011 112344445789999777 77899999976
Q ss_pred CCCeEEE
Q psy17021 155 YENQLLI 161 (199)
Q Consensus 155 ~~~~l~~ 161 (199)
......+
T Consensus 293 ~~~~~~~ 299 (343)
T 3lrv_A 293 KTKNWTK 299 (343)
T ss_dssp TTCSEEE
T ss_pred cccceEe
Confidence 6655544
No 72
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.04 E-value=0.43 Score=39.43 Aligned_cols=113 Identities=8% Similarity=-0.006 Sum_probs=71.6
Q ss_pred cCCcceEEccccCeEEEEe-CCEEEEEEcCCcc------eeeeeeccCcCceEEEEE--Ee----C---CEEEEEecccc
Q psy17021 83 VDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKK------LLRKCENKHLPNLIVKIE--SM----G---HRIYVSDVQES 146 (199)
Q Consensus 83 ~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~------Ll~~~~~~~~~~~i~~l~--~~----~---~~IlVGD~~~S 146 (199)
-++++++++--.+.|++|- ..+|++|++...+ +...... ....+.++. .. + ++++.|..-..
T Consensus 15 h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~ 92 (397)
T 1sq9_A 15 HDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV--HKSGLHHVDVLQAIERDAFELCLVATTSFSGD 92 (397)
T ss_dssp SSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEEC--CTTCEEEEEEEEEEETTTEEEEEEEEEETTSC
T ss_pred hhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEec--CCCcEEEEEEecccccCCccccEEEEEcCCCC
Confidence 4566777654445555444 5799999997655 3332221 122355444 45 7 89999999899
Q ss_pred EEEEEEeCCCC--e--EEEEeccCC---ceeEEEEEEE-----eCCe-EEEEcCCCcEEEEeec
Q psy17021 147 VFLVRYKRYEN--Q--LLIFADDTQ---PRWITTSCVL-----DYNT-VASADKFGNVCIVSTY 197 (199)
Q Consensus 147 v~ll~y~~~~~--~--l~~varD~~---~~wvta~~~L-----d~~t-~l~aD~~gNl~vlr~~ 197 (199)
|.++.....+. . +..+..... ...++++.+. |.+. ++.+..+|.+.++.+.
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 156 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFH 156 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEE
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCC
Confidence 99998865432 1 333332211 3688889888 4456 8888999999998764
No 73
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.98 E-value=0.55 Score=43.08 Aligned_cols=174 Identities=10% Similarity=0.040 Sum_probs=95.6
Q ss_pred eecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECC-----------eeeEEE-ee
Q psy17021 15 AMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGN-----------AMEFVH-KT 81 (199)
Q Consensus 15 ~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgd-----------klesVh-~~ 81 (199)
++.+-+..|++|.. +.+++||+...+.++.-+.. +..++ -+.+.. .+..+++|. ..+.+. ..
T Consensus 20 ~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~---~~~v~-~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 94 (814)
T 3mkq_A 20 DFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVT---ETPVR-AGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (814)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC---SSCEE-EEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCceEEEEecC---CCcEE-EEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 44455566777664 68999998776665543321 12221 111111 123344431 112222 22
Q ss_pred ccCCcceEEccc-cC-eEEEEe-CCEEEEEEcCCc-ceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeC
Q psy17021 82 SVDEVPYAMCPF-QG-ALLVGV-GRYLRLYDLGKK-KLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKR 154 (199)
Q Consensus 82 ~~kG~v~aL~~f-~g-~LLaav-g~~v~vy~l~~~-~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~ 154 (199)
...+++++++-- +| .|++|- .+++++|++... .+.... .. ....+.++.- .++.+++|..-.+|.++....
T Consensus 95 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~-~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF-EG-HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE-EC-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE-cC-CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 355677776543 24 455444 579999999765 332222 11 2334666665 356889999888888776543
Q ss_pred CCCeEEEEeccCCceeEEEEEEE---eCCeEEEEcCCCcEEEEeec
Q psy17021 155 YENQLLIFADDTQPRWITTSCVL---DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 155 ~~~~l~~varD~~~~wvta~~~L---d~~t~l~aD~~gNl~vlr~~ 197 (199)
........ ......++++.+- |...++.+..+|.+.++...
T Consensus 173 ~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 173 STPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp SSCSEEEE--CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred CcceeEEe--cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 33333332 2233455556665 44578888889998887643
No 74
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.97 E-value=0.63 Score=39.41 Aligned_cols=109 Identities=16% Similarity=0.158 Sum_probs=69.3
Q ss_pred cCCcceEEccc-cC-eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeCCC
Q psy17021 83 VDEVPYAMCPF-QG-ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 83 ~kG~v~aL~~f-~g-~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
.+++++++.-. +| .|+.| -..++++|++...+........ ..+..+.. .++++++|..-..|.++. ...
T Consensus 164 h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~s~d~~v~iwd--~~~ 238 (393)
T 1erj_A 164 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE---DGVTTVAVSPGDGKYIAAGSLDRAVRVWD--SET 238 (393)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEEEEECSTTCCEEEEEETTSCEEEEE--TTT
T ss_pred CCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC---CCcEEEEEECCCCCEEEEEcCCCcEEEEE--CCC
Confidence 45677776543 23 45544 3689999999876644433332 23455554 467999999888887764 333
Q ss_pred CeEEE-Eec-----cCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 157 NQLLI-FAD-----DTQPRWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 157 ~~l~~-var-----D~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
+++.. +.. .....+++++.+- |...++.+..++.+.++.+
T Consensus 239 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 239 GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 285 (393)
T ss_dssp CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 33322 211 2345689999987 4457888889999988764
No 75
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.97 E-value=0.54 Score=38.62 Aligned_cols=90 Identities=9% Similarity=0.080 Sum_probs=53.0
Q ss_pred EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCe-EEEEeccCCceeEEEEEE
Q psy17021 100 GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQ-LLIFADDTQPRWITTSCV 176 (199)
Q Consensus 100 avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~-l~~varD~~~~wvta~~~ 176 (199)
+-.++|++|++...++... +..-...+.++.. .+.+++.|..-..|.+.... ..+ +..+.. +..++++.+
T Consensus 173 ~~d~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~--~~~~~~~~~~---~~~v~~~~~ 245 (319)
T 3frx_A 173 GNDKMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA--AKKAMYTLSA---QDEVFSLAF 245 (319)
T ss_dssp ETTSCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT--TTEEEEEEEC---CSCEEEEEE
T ss_pred eCCCEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCcEEEEecC---CCcEEEEEE
Confidence 3468899999987664332 2111233566654 46799999888888776543 333 333322 346788888
Q ss_pred EeCCeEEEEcCCCcEEEEee
Q psy17021 177 LDYNTVASADKFGNVCIVST 196 (199)
Q Consensus 177 Ld~~t~l~aD~~gNl~vlr~ 196 (199)
-.+..++.+-....+.++.+
T Consensus 246 sp~~~~la~~~~~~i~v~~~ 265 (319)
T 3frx_A 246 SPNRYWLAAATATGIKVFSL 265 (319)
T ss_dssp CSSSSEEEEEETTEEEEEEE
T ss_pred cCCCCEEEEEcCCCcEEEEe
Confidence 75554444333445666554
No 76
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.89 E-value=0.52 Score=37.79 Aligned_cols=103 Identities=9% Similarity=-0.002 Sum_probs=57.2
Q ss_pred eEEEEe--CCEEEEEEcCC--ccee--eeee-ccC---cCceEEEEEE--eCCEEEEEecc-ccEEEEEEeCCCCeEEEE
Q psy17021 96 ALLVGV--GRYLRLYDLGK--KKLL--RKCE-NKH---LPNLIVKIES--MGHRIYVSDVQ-ESVFLVRYKRYENQLLIF 162 (199)
Q Consensus 96 ~LLaav--g~~v~vy~l~~--~~Ll--~~~~-~~~---~~~~i~~l~~--~~~~IlVGD~~-~Sv~ll~y~~~~~~l~~v 162 (199)
.++++- ++++.+|++.. .++. .... ... ....+..+.. .++++++++-. ..+.++..+...+++..+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 465553 58899999953 2221 1111 110 0123445554 36688877754 467777776445555554
Q ss_pred eccCCceeEEEEEEE-eCCeEEEEc-CCCcEEEEeecC
Q psy17021 163 ADDTQPRWITTSCVL-DYNTVASAD-KFGNVCIVSTYR 198 (199)
Q Consensus 163 arD~~~~wvta~~~L-d~~t~l~aD-~~gNl~vlr~~~ 198 (199)
..-.....++++.+- |.+.+++++ .++.+.++++++
T Consensus 271 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 271 GFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred eeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 432222235566665 344566666 568888887764
No 77
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.88 E-value=0.37 Score=38.88 Aligned_cols=124 Identities=12% Similarity=0.008 Sum_probs=82.0
Q ss_pred eeEECCeeeEEEeeccCCcceEEccc-cCeE-EEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEe
Q psy17021 68 DRLVGNAMEFVHKTSVDEVPYAMCPF-QGAL-LVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSD 142 (199)
Q Consensus 68 ri~vgdklesVh~~~~kG~v~aL~~f-~g~L-Laav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD 142 (199)
+-..|...+.+....-++++++++-- +|++ ++|- +..|++|++...+.+..... ....+.++.. .+++++.|.
T Consensus 16 ~~~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~ 93 (369)
T 3zwl_B 16 LYFQGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG--HTGTIWSIDVDCFTKYCVTGS 93 (369)
T ss_dssp CCSSCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEE
T ss_pred eEEeccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh--cCCcEEEEEEcCCCCEEEEEe
Confidence 33467778888888888999887533 3454 4433 67899999987765443322 1234666665 477999998
Q ss_pred ccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeC-CeEEEEcCC-----CcEEEEeec
Q psy17021 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY-NTVASADKF-----GNVCIVSTY 197 (199)
Q Consensus 143 ~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~-~t~l~aD~~-----gNl~vlr~~ 197 (199)
.-..+.++.. ..++...... .+..++++.+-.+ ..++++..+ +++.++.+.
T Consensus 94 ~dg~i~iwd~--~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 94 ADYSIKLWDV--SNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp TTTEEEEEET--TTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred CCCeEEEEEC--CCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence 8777777654 3444433333 5667888888744 467777777 888888654
No 78
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.86 E-value=0.51 Score=45.91 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=69.7
Q ss_pred EccccCeEEEEeCCEEEEEEcCCcceeeeeecc-CcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCc
Q psy17021 90 MCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK-HLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQP 168 (199)
Q Consensus 90 L~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~-~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~ 168 (199)
+.|-...++++.++.+.+|++...+.+...... ............++++++|+.-.++.++.. ..++...... ...
T Consensus 806 ~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~--~~~~~~~~~~-~h~ 882 (1249)
T 3sfz_A 806 WSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNI--DSRLKVADCR-GHL 882 (1249)
T ss_dssp BCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEET--TTTEEEEEEC-CCS
T ss_pred ECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEc--CCCceeeecC-CCc
Confidence 334334677888999999999877655443322 122223344446889999999888887755 4444443333 356
Q ss_pred eeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 169 RWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 169 ~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
.+++++.+- |...++.+..++.+.++..
T Consensus 883 ~~v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 883 SWVHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 689999988 4457888899999988864
No 79
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.81 E-value=0.37 Score=39.79 Aligned_cols=113 Identities=5% Similarity=-0.102 Sum_probs=66.2
Q ss_pred ccCCcceEEccc---cCeEEE--EeCCEEEEEEcCCcceeeeeecc-CcCceEEEEEEeCCEEEEEeccccEEEEEEeCC
Q psy17021 82 SVDEVPYAMCPF---QGALLV--GVGRYLRLYDLGKKKLLRKCENK-HLPNLIVKIESMGHRIYVSDVQESVFLVRYKRY 155 (199)
Q Consensus 82 ~~kG~v~aL~~f---~g~LLa--avg~~v~vy~l~~~~Ll~~~~~~-~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~ 155 (199)
...++++++.-- .|..++ +..+++++|++...+........ ..+.........+.++++|..-..|.++..+..
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 344678776543 344443 34689999999877654332221 112223333445789999998889988866543
Q ss_pred CCeEEEEeccCCceeEEEEEEEeCC-eEEEEcCCCcEEEEee
Q psy17021 156 ENQLLIFADDTQPRWITTSCVLDYN-TVASADKFGNVCIVST 196 (199)
Q Consensus 156 ~~~l~~varD~~~~wvta~~~Ld~~-t~l~aD~~gNl~vlr~ 196 (199)
......+.. ....+++++.|-.++ .++.+. ++.+.++.+
T Consensus 203 ~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 203 DQASSRFPV-DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDL 242 (343)
T ss_dssp TSCCEECCC-CTTSCEEEEEECTTSSEEEEEE-SSBEEEEET
T ss_pred CCCccEEec-cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEc
Confidence 322123322 245689999998555 444444 447777643
No 80
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.78 E-value=0.65 Score=38.13 Aligned_cols=172 Identities=13% Similarity=0.051 Sum_probs=89.2
Q ss_pred CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceee------eeEEE-EEc-CceeEE-CCeeeEEEeeccCCc----
Q psy17021 20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKA------HQTHT-HSG-RSDRLV-GNAMEFVHKTSVDEV---- 86 (199)
Q Consensus 20 ~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~------~~~~~-~~~-~~ri~v-gdklesVh~~~~kG~---- 86 (199)
+|++++.-.+.+..||. ..+++.+-.... ...+.. .-.+. ..+ +.|+++ ...=+.+....+.+.
T Consensus 47 dG~ilvs~~~~V~~~d~-~G~~~W~~~~~~--~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~ 123 (276)
T 3no2_A 47 AGEILFSYSKGAKMITR-DGRELWNIAAPA--GCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERP 123 (276)
T ss_dssp TSCEEEECBSEEEEECT-TSCEEEEEECCT--TCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSG
T ss_pred CCCEEEeCCCCEEEECC-CCCEEEEEcCCC--CccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcc
Confidence 78999977788999998 666777554320 001100 00011 111 233322 111112222222211
Q ss_pred ---ceEEc-cccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCC-CCeE
Q psy17021 87 ---PYAMC-PFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRY-ENQL 159 (199)
Q Consensus 87 ---v~aL~-~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~-~~~l 159 (199)
+..+. .-+|.++++. +++|..|+.. .+++.+.... ...+.......++ ++|++...+ .+..|+++ .+.+
T Consensus 124 ~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~-~v~~~d~~tG~~~ 199 (276)
T 3no2_A 124 HAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGD-CLVACGDAH-CFVQLNLESNRIV 199 (276)
T ss_dssp GGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSC-EEEECBTTS-EEEEECTTTCCEE
T ss_pred cccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCC-EEEEeCCCC-eEEEEeCcCCcEE
Confidence 11111 1256666655 5789999987 4444443332 1222222222344 556666555 47888988 4555
Q ss_pred EEEecc----CCceeEEEEEEEeCCeEEEEcCCC---------cEEEEeecC
Q psy17021 160 LIFADD----TQPRWITTSCVLDYNTVASADKFG---------NVCIVSTYR 198 (199)
Q Consensus 160 ~~varD----~~~~wvta~~~Ld~~t~l~aD~~g---------Nl~vlr~~~ 198 (199)
-++.+. ..-.|++++..+.+..+++++..| +..++++++
T Consensus 200 w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~ 251 (276)
T 3no2_A 200 RRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS 251 (276)
T ss_dssp EEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT
T ss_pred EEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECC
Confidence 666542 134689999999777777777443 335666654
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.78 E-value=0.93 Score=42.38 Aligned_cols=116 Identities=9% Similarity=0.030 Sum_probs=74.2
Q ss_pred ccCCcceEEcccc---Ce-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---------------CCEEEEE
Q psy17021 82 SVDEVPYAMCPFQ---GA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---------------GHRIYVS 141 (199)
Q Consensus 82 ~~kG~v~aL~~f~---g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---------------~~~IlVG 141 (199)
...++++++.--. |. +++|- +++|++|++..............+..+.++... ++++++|
T Consensus 97 ~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg 176 (753)
T 3jro_A 97 VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 176 (753)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEE
T ss_pred CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEE
Confidence 3556777765432 44 44333 589999999765322222222223346666643 5789999
Q ss_pred eccccEEEEEEeCCCCeEEEEe-ccCCceeEEEEEEEeC----CeEEEEcCCCcEEEEeec
Q psy17021 142 DVQESVFLVRYKRYENQLLIFA-DDTQPRWITTSCVLDY----NTVASADKFGNVCIVSTY 197 (199)
Q Consensus 142 D~~~Sv~ll~y~~~~~~l~~va-rD~~~~wvta~~~Ld~----~t~l~aD~~gNl~vlr~~ 197 (199)
..-..|.++...........+. -......++++.+-.+ ..++.+..+|.+.++...
T Consensus 177 s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 177 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 9999999998876554333322 1234567889988844 468888999999988654
No 82
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.70 E-value=0.77 Score=38.39 Aligned_cols=108 Identities=10% Similarity=0.065 Sum_probs=67.0
Q ss_pred CCcceEEccc--cCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE----eCCEEEEEeccccEEEEEEeCCC
Q psy17021 84 DEVPYAMCPF--QGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES----MGHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 84 kG~v~aL~~f--~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~----~~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
.+.++++.-- ...|+.|- .++|++|++...+++..-.-. ...+.++.. .+++++.|..-..|.++.. ..
T Consensus 154 ~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~--~~ 229 (354)
T 2pbi_B 154 TNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH--GADVLCLDLAPSETGNTFVSGGCDKKAMVWDM--RS 229 (354)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEECCCSSCCEEEEEETTSCEEEEET--TT
T ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC--CCCeEEEEEEeCCCCCEEEEEeCCCeEEEEEC--CC
Confidence 3445554322 23565444 689999999887765433221 123555543 3579999998888877654 33
Q ss_pred CeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 157 NQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 157 ~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
++....- .....+++++.+- |.+.++.+..++.+.++.+
T Consensus 230 ~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~ 269 (354)
T 2pbi_B 230 GQCVQAF-ETHESDVNSVRYYPSGDAFASGSDDATCRLYDL 269 (354)
T ss_dssp CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CcEEEEe-cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 3333222 2345688888887 4557888888898888754
No 83
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.66 E-value=0.14 Score=48.09 Aligned_cols=102 Identities=5% Similarity=0.069 Sum_probs=64.6
Q ss_pred eEEEEe-CCEEEEEEcCCcc--eeeeeeccCcCceEEEEEEe-----CCEEEEEeccccEEEEEEeCCCCeE--EEEecc
Q psy17021 96 ALLVGV-GRYLRLYDLGKKK--LLRKCENKHLPNLIVKIESM-----GHRIYVSDVQESVFLVRYKRYENQL--LIFADD 165 (199)
Q Consensus 96 ~LLaav-g~~v~vy~l~~~~--Ll~~~~~~~~~~~i~~l~~~-----~~~IlVGD~~~Sv~ll~y~~~~~~l--~~varD 165 (199)
.+++|- .++|++|++.... .............+.++... +++++.|+.-..+.++......... ......
T Consensus 172 ~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~ 251 (753)
T 3jro_A 172 KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEE 251 (753)
T ss_dssp CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSS
T ss_pred EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccC
Confidence 344443 6889999996542 11112222122347777654 6789999999999998876543211 222223
Q ss_pred CCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 166 TQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 166 ~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
..+.+++++.+- |...++.+..+|.+.++.+.
T Consensus 252 ~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 252 KFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp CCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 356678888886 44468888899999988765
No 84
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.66 E-value=0.66 Score=37.34 Aligned_cols=111 Identities=12% Similarity=0.139 Sum_probs=64.1
Q ss_pred cCCcceEEccc-cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCC
Q psy17021 83 VDEVPYAMCPF-QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
..+++.++.-- +|. +++| -.+.|++|++...+.+...... ....+..+. ..++++++|..-..+.++.+. ..
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~--~~ 224 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYS--KG 224 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCS-SCCCEEEEEECTTSSEEEEEETTTEEEEEETT--TT
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEECC--CC
Confidence 34566665432 344 4433 3678999999877654433222 122344444 357799999988888777553 33
Q ss_pred e-EEEEeccCCceeEEEEEEE--eCCeEEEEcCCCcEEEEee
Q psy17021 158 Q-LLIFADDTQPRWITTSCVL--DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 158 ~-l~~varD~~~~wvta~~~L--d~~t~l~aD~~gNl~vlr~ 196 (199)
+ +..+.......+.....+- +...++.+..+|.+.++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 225 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence 3 3333333334443333332 3346778888899888764
No 85
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.62 E-value=0.78 Score=37.88 Aligned_cols=102 Identities=10% Similarity=0.008 Sum_probs=58.5
Q ss_pred EEccccCeEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEecc
Q psy17021 89 AMCPFQGALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADD 165 (199)
Q Consensus 89 aL~~f~g~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD 165 (199)
.+.|+...++++ -.++|++|+...+ .... +......+.++.- .+++++.|..-..|.++...........+..
T Consensus 179 ~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~--~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~- 254 (343)
T 2xzm_R 179 KVQPFAPYFASVGWDGRLKVWNTNFQ-IRYT--FKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDA- 254 (343)
T ss_dssp CCCSSCCEEEEEETTSEEEEEETTTE-EEEE--EECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEEC-
T ss_pred ccCCCCCEEEEEcCCCEEEEEcCCCc-eeEE--EcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecC-
Confidence 344555555543 4789999995433 2221 1111234566654 5779999998888888765332222233322
Q ss_pred CCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021 166 TQPRWITTSCVLDYNTVASADKFGNVCIVST 196 (199)
Q Consensus 166 ~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~ 196 (199)
...++++.+-.+..++.+-.++.+.++.+
T Consensus 255 --~~~v~~v~~sp~~~~la~~~d~~v~iw~~ 283 (343)
T 2xzm_R 255 --GSTINQIAFNPKLQWVAVGTDQGVKIFNL 283 (343)
T ss_dssp --SSCEEEEEECSSSCEEEEEESSCEEEEES
T ss_pred --CCcEEEEEECCCCCEEEEECCCCEEEEEe
Confidence 22477888765555555555666777654
No 86
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.61 E-value=0.17 Score=42.21 Aligned_cols=110 Identities=14% Similarity=0.135 Sum_probs=67.8
Q ss_pred CCcceEEcccc--Ce-EEEEeCC----EEEEEEcCCc-ceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEE
Q psy17021 84 DEVPYAMCPFQ--GA-LLVGVGR----YLRLYDLGKK-KLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRY 152 (199)
Q Consensus 84 kG~v~aL~~f~--g~-LLaavg~----~v~vy~l~~~-~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y 152 (199)
+++++++.--. +. ++++-.. +|++|++... +.+..-.. .....+.++.. .+++++.|..-..+.++..
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~ 292 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQ-GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNP 292 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCS-CCSSCEEEEEECSSCSSCEEEEESSSEEEEECS
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeec-CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeC
Confidence 56677665443 23 4444443 8999999764 33222210 12234677765 4678999988778777654
Q ss_pred eCCCCeEEEEeccCCceeEEEEEEEeC--CeEEEEcCCCcEEEEeec
Q psy17021 153 KRYENQLLIFADDTQPRWITTSCVLDY--NTVASADKFGNVCIVSTY 197 (199)
Q Consensus 153 ~~~~~~l~~varD~~~~wvta~~~Ld~--~t~l~aD~~gNl~vlr~~ 197 (199)
+. ...+..+. ....+++++.+-.+ ..++.+..++.+.++.++
T Consensus 293 ~~-~~~~~~~~--~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 293 ES-AEQLSQFP--ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp SS-CCEEEEEE--CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred CC-Cccceeec--CCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 32 23333333 23457888888754 468888889999998764
No 87
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.60 E-value=1.1 Score=39.28 Aligned_cols=109 Identities=13% Similarity=0.095 Sum_probs=68.1
Q ss_pred ccCCcceEEccc-cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCC
Q psy17021 82 SVDEVPYAMCPF-QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 82 ~~kG~v~aL~~f-~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
...++++++.-- +++ |+.| -++++++|+...+.+....... ..+.++.. .+.+++.|..-..|.+. +...
T Consensus 424 ~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~---~~v~~~~~spd~~~las~~~d~~i~iw--~~~~ 498 (577)
T 2ymu_A 424 GHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHS---SSVRGVAFSPDGQTIASASDDKTVKLW--NRNG 498 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCS---SCEEEEEECTTSCEEEEEETTSEEEEE--ETTS
T ss_pred CCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCC---CCEEEEEEcCCCCEEEEEeCCCEEEEE--cCCC
Confidence 345666665422 344 4433 3688999998655443322222 23555554 56789999887777775 4444
Q ss_pred CeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 157 NQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 157 ~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
..+..+.. ....++++++- |...++.+..++.+.++.++
T Consensus 499 ~~~~~~~~--h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 499 QLLQTLTG--HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp CEEEEEEC--CSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred CEEEEEeC--CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 55555443 34578999987 44468888999999988654
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.50 E-value=0.75 Score=36.86 Aligned_cols=111 Identities=13% Similarity=0.035 Sum_probs=61.9
Q ss_pred ccCCcceEEccc-cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEEEEeCCCC
Q psy17021 82 SVDEVPYAMCPF-QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 82 ~~kG~v~aL~~f-~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
..++++++++-- +|+++++ -.+++++|++...+.+..... +..+..+... ++.+++|-.-.++.++. .+..
T Consensus 213 ~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~d~~i~iwd--~~~~ 287 (340)
T 4aow_A 213 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDIINALCFSPNRYWLCAATGPSIKIWD--LEGK 287 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC---SSCEEEEEECSSSSEEEEEETTEEEEEE--TTTT
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC---CceEEeeecCCCCceeeccCCCEEEEEE--CCCC
Confidence 456778876532 3555443 358999999987765443222 2334444432 22333433334444432 2222
Q ss_pred eE--------EEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 158 QL--------LIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 158 ~l--------~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
.+ ........+.+|+++.+- |...++.+..+|.|.+.++.
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 288 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp EEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 22 222234567789999887 44578888999999998763
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.47 E-value=0.99 Score=38.10 Aligned_cols=112 Identities=14% Similarity=0.005 Sum_probs=67.8
Q ss_pred CCcceEEccc---cCeE-EEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCC
Q psy17021 84 DEVPYAMCPF---QGAL-LVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 84 kG~v~aL~~f---~g~L-Laav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
++.+.++..+ .+.+ ++|- .++|++|++...+.+...........+.++.. .++++++|..-..+.++..+ .
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~--~ 245 (437)
T 3gre_A 168 NEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR--F 245 (437)
T ss_dssp CCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT--T
T ss_pred ccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC--C
Confidence 3444444433 2544 4333 58999999987765444332101234666665 57899999998888887553 3
Q ss_pred CeEEEEeccCCceeEEEEEEE-e----CCeEEEEcCCCcEEEEeec
Q psy17021 157 NQLLIFADDTQPRWITTSCVL-D----YNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 157 ~~l~~varD~~~~wvta~~~L-d----~~t~l~aD~~gNl~vlr~~ 197 (199)
++....-+-.....++++.+- . ...++.+..++.+.++.+.
T Consensus 246 ~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 246 NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 444433332334577887554 2 2268888888888887653
No 90
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.45 E-value=0.87 Score=37.33 Aligned_cols=110 Identities=8% Similarity=0.054 Sum_probs=67.7
Q ss_pred ccCCcceEEccc-cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCC
Q psy17021 82 SVDEVPYAMCPF-QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 82 ~~kG~v~aL~~f-~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
...+++++++-- +|++||. -.++|++|++...+.+..-... ..+.++.- .+.++++|+ ..++.++.+++
T Consensus 194 ~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp~~~~la~~~-~~~i~v~~~~~-- 267 (319)
T 3frx_A 194 GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ---DEVFSLAFSPNRYWLAAAT-ATGIKVFSLDP-- 267 (319)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC---SCEEEEEECSSSSEEEEEE-TTEEEEEEETT--
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---CcEEEEEEcCCCCEEEEEc-CCCcEEEEeCc--
Confidence 445677776533 3555543 3579999999887755443332 23555554 466777776 45677766642
Q ss_pred CeEE-EEeccC------CceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 157 NQLL-IFADDT------QPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 157 ~~l~-~varD~------~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
..+. .+...+ ...+++++++- |...++.+..++.|.+..+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 268 QYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 2222 222111 24578888887 44578889999999998764
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.41 E-value=0.96 Score=37.96 Aligned_cols=112 Identities=10% Similarity=0.066 Sum_probs=66.1
Q ss_pred cCCcceEEccccC--eEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCC
Q psy17021 83 VDEVPYAMCPFQG--ALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 83 ~kG~v~aL~~f~g--~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
..++++++.--.+ .++++ -..+|++|++...+.+...........+.++.. .++++++|..-..+.++. ...
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd--~~~ 207 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIE--PRK 207 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEE--TTT
T ss_pred CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEe--CCC
Confidence 3455666543322 34433 368899999987765443310212334667665 477899998777776664 344
Q ss_pred CeEE-EEeccCCceeEEEEEEEeCCeEE-EE---cCCCcEEEEee
Q psy17021 157 NQLL-IFADDTQPRWITTSCVLDYNTVA-SA---DKFGNVCIVST 196 (199)
Q Consensus 157 ~~l~-~varD~~~~wvta~~~Ld~~t~l-~a---D~~gNl~vlr~ 196 (199)
++.. .+...+....++++.+..++.++ .+ ..++.+.++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 208 GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence 4443 33244544457777777556544 44 57788877754
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.40 E-value=1.3 Score=40.65 Aligned_cols=107 Identities=5% Similarity=-0.085 Sum_probs=62.0
Q ss_pred CcceEEccc---cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021 85 EVPYAMCPF---QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 85 G~v~aL~~f---~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
+++.++.-. +|..++.. +++|++|++...+.+...... ...+.++.. .++++++|..-.++.++.. ...
T Consensus 185 ~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~--~~~ 260 (814)
T 3mkq_A 185 RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH--MSNVSFAVFHPTLPIIISGSEDGTLKIWNS--STY 260 (814)
T ss_dssp TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECC--SSCEEEEEECSSSSEEEEEETTSCEEEEET--TTC
T ss_pred CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCC--CCCEEEEEEcCCCCEEEEEeCCCeEEEEEC--CCC
Confidence 555554433 45444433 578999999877654433221 123555554 5678999998888877643 443
Q ss_pred eE-EEEeccCCceeEEEEEEEeCCe--EEEEcCCCcEEEEeec
Q psy17021 158 QL-LIFADDTQPRWITTSCVLDYNT--VASADKFGNVCIVSTY 197 (199)
Q Consensus 158 ~l-~~varD~~~~wvta~~~Ld~~t--~l~aD~~gNl~vlr~~ 197 (199)
+. ..+... ...++++.+-.++. ++.+..++.+.+++..
T Consensus 261 ~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (814)
T 3mkq_A 261 KVEKTLNVG--LERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (814)
T ss_dssp SEEEEECCS--SSSEEEEEECTTCGGGEEEEEETTEEEEEECS
T ss_pred cEEEEeecC--CCcEEEEEEccCCCceEEEEEeCCCEEEEEcC
Confidence 33 333322 34566666654432 5666667777776643
No 93
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.39 E-value=1.5 Score=39.63 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=63.8
Q ss_pred eEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEE
Q psy17021 96 ALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSC 175 (199)
Q Consensus 96 ~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~ 175 (199)
.++++..+.+.+|+-++ + ...... .....+.....+.++++|..-..|.++..+. +.+.++..-..+.+++++.
T Consensus 425 ~~~~~~~~~v~~~~~~~--~-~~~~~~-~~v~~va~spdg~~lasgs~D~~v~lwd~~~--~~~~~~~~~~h~~~v~~v~ 498 (611)
T 1nr0_A 425 IAVAACYKHIAIYSHGK--L-TEVPIS-YNSSCVALSNDKQFVAVGGQDSKVHVYKLSG--ASVSEVKTIVHPAEITSVA 498 (611)
T ss_dssp CEEEEESSEEEEEETTE--E-EEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEEEET--TEEEEEEEEECSSCEEEEE
T ss_pred EEEEEeCceEEEEeCCc--e-eeeecC-CCceEEEEeCCCCEEEEeCCCCeEEEEEccC--CceeeeeccCCCCceEEEE
Confidence 67777888999998432 3 222222 2222333334578999999888888887753 4444433334567899999
Q ss_pred EE-eCCeEEEEcCCCcEEEEeec
Q psy17021 176 VL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 176 ~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
|- |...++.++.++.+.++...
T Consensus 499 fspdg~~las~s~d~~v~~w~~~ 521 (611)
T 1nr0_A 499 FSNNGAFLVATDQSRKVIPYSVA 521 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEEGG
T ss_pred ECCCCCEEEEEcCCCCEEEEEcC
Confidence 97 44578888999999888654
No 94
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.38 E-value=1.1 Score=38.19 Aligned_cols=110 Identities=10% Similarity=0.086 Sum_probs=65.9
Q ss_pred cCCcceEEccc-cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe----------------------CCE
Q psy17021 83 VDEVPYAMCPF-QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM----------------------GHR 137 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~----------------------~~~ 137 (199)
..+.+.++..- +|.++++ -.++|++|++...+.... +......+.++.-. +.+
T Consensus 233 h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 310 (410)
T 1vyh_C 233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE--LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF 310 (410)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCE
T ss_pred CCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeE--ecCCCceEEEEEEcCcccccchhhhccccccccCCCCCE
Confidence 34456665543 3455543 358999999976654322 21112234444432 568
Q ss_pred EEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeC-CeEEEEcCCCcEEEEeec
Q psy17021 138 IYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY-NTVASADKFGNVCIVSTY 197 (199)
Q Consensus 138 IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~-~t~l~aD~~gNl~vlr~~ 197 (199)
++.|.--.+|.++.. ..++....-. ....|++++.+-.+ ..++.+..++.+.++.+.
T Consensus 311 l~sgs~D~~i~iwd~--~~~~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 311 LLSGSRDKTIKMWDV--STGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp EEEEETTSEEEEEET--TTTEEEEEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred EEEEeCCCeEEEEEC--CCCceEEEEE-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 888888777777654 3333322222 24568999988743 468888899999888653
No 95
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.34 E-value=1 Score=37.38 Aligned_cols=101 Identities=9% Similarity=0.028 Sum_probs=63.5
Q ss_pred eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC-eEEEEeccCCceeE
Q psy17021 96 ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN-QLLIFADDTQPRWI 171 (199)
Q Consensus 96 ~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~-~l~~varD~~~~wv 171 (199)
.|+.| ..+++++|++...+.........-...|.++.- .+++++.|..-.++.+...+.... .....- ......+
T Consensus 75 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~h~~~v 153 (345)
T 3fm0_A 75 YLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL-NSHTQDV 153 (345)
T ss_dssp EEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE-CCCCSCE
T ss_pred EEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe-cCcCCCe
Confidence 34433 368899999976543222233311234666665 478999999999999988765433 222222 2334568
Q ss_pred EEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 172 TTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 172 ta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
+++.+- |.+.++.+..++.+.++...
T Consensus 154 ~~~~~~p~~~~l~s~s~d~~i~~w~~~ 180 (345)
T 3fm0_A 154 KHVVWHPSQELLASASYDDTVKLYREE 180 (345)
T ss_dssp EEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEec
Confidence 888887 44578888888988887653
No 96
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.25 E-value=0.91 Score=36.32 Aligned_cols=121 Identities=11% Similarity=0.087 Sum_probs=61.2
Q ss_pred eeEEEeeccCCcceEEccc-cCe-EEEEe--CCEEEEEEcC---CcceeeeeeccCcCceEEEEEEeCCEEEEEec-ccc
Q psy17021 75 MEFVHKTSVDEVPYAMCPF-QGA-LLVGV--GRYLRLYDLG---KKKLLRKCENKHLPNLIVKIESMGHRIYVSDV-QES 146 (199)
Q Consensus 75 lesVh~~~~kG~v~aL~~f-~g~-LLaav--g~~v~vy~l~---~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~-~~S 146 (199)
++.+......+.+.++.-- +|+ |+++- ++++.+|++. ..+........ .......+...++++++++. -..
T Consensus 74 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~ 152 (343)
T 1ri6_A 74 LTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDR 152 (343)
T ss_dssp EEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTE
T ss_pred eeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCE
Confidence 3334444444555544322 344 65554 5789999993 22232222211 11122233345678999994 456
Q ss_pred EEEEEEeCCCCeEEEEe----ccCCceeEEEEEEEeCC-eEEEEc-CCCcEEEEeec
Q psy17021 147 VFLVRYKRYENQLLIFA----DDTQPRWITTSCVLDYN-TVASAD-KFGNVCIVSTY 197 (199)
Q Consensus 147 v~ll~y~~~~~~l~~va----rD~~~~wvta~~~Ld~~-t~l~aD-~~gNl~vlr~~ 197 (199)
+.++..+. .+++..+. .......+.++.+-.++ .+++++ .++.+.++.++
T Consensus 153 v~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 153 ICLFTVSD-DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp EEEEEECT-TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred EEEEEecC-CCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 66665543 24444322 11222355566665333 455554 67788888764
No 97
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.23 E-value=0.15 Score=43.90 Aligned_cols=100 Identities=10% Similarity=0.120 Sum_probs=61.0
Q ss_pred cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--C-CEEEEEeccccEEEEEEeCCCCeEEEEeccCCc
Q psy17021 94 QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--G-HRIYVSDVQESVFLVRYKRYENQLLIFADDTQP 168 (199)
Q Consensus 94 ~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~-~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~ 168 (199)
+|.++++. .++|++|++..+.+...... ...|.++... + .+++.|..-.+|.++..+.....-.........
T Consensus 220 ~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h---~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~ 296 (435)
T 4e54_B 220 SSRMVVTGDNVGNVILLNMDGKELWNLRMH---KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHR 296 (435)
T ss_dssp TTTEEEEECSSSBEEEEESSSCBCCCSBCC---SSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCS
T ss_pred CCCEEEEEeCCCcEeeeccCcceeEEEecc---cceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecc
Confidence 34444433 47899999976654322212 2247777653 3 477788777778776543322221222223345
Q ss_pred eeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 169 RWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 169 ~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
.+|+++.+- |...++.+..+|.|.++..
T Consensus 297 ~~v~~~~~spdg~~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 297 HPVNAACFSPDGARLLTTDQKSEIRVYSA 325 (435)
T ss_dssp SCEEECCBCTTSSEEEEEESSSCEEEEES
T ss_pred ccccceeECCCCCeeEEEcCCCEEEEEEC
Confidence 678888886 4557888899999988864
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.14 E-value=0.15 Score=42.20 Aligned_cols=117 Identities=10% Similarity=0.088 Sum_probs=68.2
Q ss_pred eeccCCcceEEccc-cCe-EEEEe-CCEEEEEEcCCcc---eeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEE
Q psy17021 80 KTSVDEVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKK---LLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVR 151 (199)
Q Consensus 80 ~~~~kG~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~---Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~ 151 (199)
....+++++++.-- +|+ |++|- .++|++|++...+ +.+..... ....+.++.. .+++++.|..-..+.++.
T Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 96 LLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP-LRSTILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp CCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS-CCSCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred ecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc-cCCCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 34456777776543 344 44433 6789999997654 22222110 1234666665 467999999888998888
Q ss_pred EeCCC--------------CeEEEEeccCCceeEEEEEEEe-CCeEEEEcCCCcEEEEeec
Q psy17021 152 YKRYE--------------NQLLIFADDTQPRWITTSCVLD-YNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 152 y~~~~--------------~~l~~varD~~~~wvta~~~Ld-~~t~l~aD~~gNl~vlr~~ 197 (199)
..... ..-..+..=....+++++.+-. ...++.+..++.+.++.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~ 235 (377)
T 3dwl_C 175 AYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPS 235 (377)
T ss_dssp ECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEEC
T ss_pred EEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 74211 0111111114566799998874 4468888899998887653
No 99
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.03 E-value=0.78 Score=41.97 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=57.9
Q ss_pred EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEE
Q psy17021 97 LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITT 173 (199)
Q Consensus 97 LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta 173 (199)
++.| -.++|++|++...++.....- ....+.++.. .+++++.|..-.+|.+.... .++....-. ....+++
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~--h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~--~~~~~~~~~--~~~~v~~ 607 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAG--HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA--EGKKLYSLE--ANSVIHA 607 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEETTSBCEEEETT--TTEEEECCB--CSSCEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcC--CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC--CCceEEEec--CCCcEEE
Confidence 4433 468999999987765443221 1234666665 47799999988888887543 333222111 2346788
Q ss_pred EEEEeCCeEEEEcCCCcEEEEee
Q psy17021 174 SCVLDYNTVASADKFGNVCIVST 196 (199)
Q Consensus 174 ~~~Ld~~t~l~aD~~gNl~vlr~ 196 (199)
+.+-.++.++++-.++++.++.+
T Consensus 608 ~~~sp~~~~l~~~~~~~i~iwd~ 630 (694)
T 3dm0_A 608 LCFSPNRYWLCAATEHGIKIWDL 630 (694)
T ss_dssp EEECSSSSEEEEEETTEEEEEET
T ss_pred EEEcCCCcEEEEEcCCCEEEEEC
Confidence 88876666666655666776643
No 100
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=95.02 E-value=1.5 Score=37.53 Aligned_cols=114 Identities=11% Similarity=0.079 Sum_probs=69.1
Q ss_pred ccCCcceEEccc--cCeEEE--EeCCEEEEEEcCC-cceeeeeeccCcCceEEEEEEe--C-CEEEEEeccccEEEEEEe
Q psy17021 82 SVDEVPYAMCPF--QGALLV--GVGRYLRLYDLGK-KKLLRKCENKHLPNLIVKIESM--G-HRIYVSDVQESVFLVRYK 153 (199)
Q Consensus 82 ~~kG~v~aL~~f--~g~LLa--avg~~v~vy~l~~-~~Ll~~~~~~~~~~~i~~l~~~--~-~~IlVGD~~~Sv~ll~y~ 153 (199)
..+++++++.-- ...+++ +..++|++|++.. ++.+..-.. ....+.++.-. + .+++.|..-.+|.++...
T Consensus 275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 344566665433 333443 3468999999976 332222111 12346677653 4 468888888899888775
Q ss_pred CCC------------CeEEEEeccCCceeEEEEEEEeCC--eEEEEcCCCcEEEEeecC
Q psy17021 154 RYE------------NQLLIFADDTQPRWITTSCVLDYN--TVASADKFGNVCIVSTYR 198 (199)
Q Consensus 154 ~~~------------~~l~~varD~~~~wvta~~~Ld~~--t~l~aD~~gNl~vlr~~~ 198 (199)
... .++...- .....+++++.+-.++ .++.+..++.|.++++++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 353 KIGEEQSTEDAEDGPPELLFIH-GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp GTTCCCCHHHHHHCCTTEEEEC-CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCccccCccccccCCcceEEEc-CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 422 1232222 2234578888887444 577888899999998753
No 101
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.00 E-value=1.1 Score=37.01 Aligned_cols=84 Identities=10% Similarity=0.007 Sum_probs=55.8
Q ss_pred cCe-EEEEe-C--CEEEEEEcC--CcceeeeeeccCcCceEEEEE--EeCCEEEEEec-cccEEEEEEeCCCCeEEEEec
Q psy17021 94 QGA-LLVGV-G--RYLRLYDLG--KKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDV-QESVFLVRYKRYENQLLIFAD 164 (199)
Q Consensus 94 ~g~-LLaav-g--~~v~vy~l~--~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~-~~Sv~ll~y~~~~~~l~~var 164 (199)
+|+ |+++- + +++.+|++. ..++....... ....+..+. ..++++++++. -..+.+++++.+.+++..+..
T Consensus 269 dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 347 (361)
T 3scy_A 269 DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-TGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKK 347 (361)
T ss_dssp TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-CSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSC
T ss_pred CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-CCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecce
Confidence 454 54544 3 689999995 23433332222 112233343 45788999985 468999999988999999887
Q ss_pred cCCceeEEEEEEEe
Q psy17021 165 DTQPRWITTSCVLD 178 (199)
Q Consensus 165 D~~~~wvta~~~Ld 178 (199)
....-.++|+.|+|
T Consensus 348 ~~~~~~p~~v~~~~ 361 (361)
T 3scy_A 348 DIKVDKPVCLKFVD 361 (361)
T ss_dssp CEECSSEEEEEEEC
T ss_pred eeeCCCCeEEEEcC
Confidence 76666789998875
No 102
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.89 E-value=0.43 Score=39.63 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=68.5
Q ss_pred CCcceEEcccc--CeEEEE--eCCEEEEEEcCCcceeeeeeccCc----CceEEEEEEe--C-CEEEEEeccc---cEEE
Q psy17021 84 DEVPYAMCPFQ--GALLVG--VGRYLRLYDLGKKKLLRKCENKHL----PNLIVKIESM--G-HRIYVSDVQE---SVFL 149 (199)
Q Consensus 84 kG~v~aL~~f~--g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~----~~~i~~l~~~--~-~~IlVGD~~~---Sv~l 149 (199)
.++++++.--. +.++++ -..+|++|++...+.+........ ...+.++... + .++++|.--. .+.+
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEE
Confidence 44566554332 455544 357899999987765444333200 2346777654 3 4788887766 7777
Q ss_pred EEEeCCCCeEEEEeccCCceeEEEEEEE--eCCeEEEEcCCCcEEEEeec
Q psy17021 150 VRYKRYENQLLIFADDTQPRWITTSCVL--DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 150 l~y~~~~~~l~~varD~~~~wvta~~~L--d~~t~l~aD~~gNl~vlr~~ 197 (199)
+..+.....+..+. ......++++.+- |...++.+..++.+.++.+.
T Consensus 245 ~d~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~ 293 (416)
T 2pm9_A 245 WDLRNANTPLQTLN-QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE 293 (416)
T ss_dssp EETTSTTSCSBCCC-SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS
T ss_pred EeCCCCCCCcEEee-cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC
Confidence 76543222222221 1345678888886 45578888999999888643
No 103
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.87 E-value=1.6 Score=37.10 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=68.2
Q ss_pred cCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeE
Q psy17021 94 QGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWI 171 (199)
Q Consensus 94 ~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wv 171 (199)
++.|.+|.+++|++|+....+..+......-...|+++.- .++++++|..-.+|.+... +.++....-..+. ..+
T Consensus 116 ~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~--~~~~~~~~~~~h~-~~v 192 (420)
T 4gga_A 116 GNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDV--QQQKRLRNMTSHS-ARV 192 (420)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEET--TTTEEEEEECCCS-SCE
T ss_pred CCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEc--CCCcEEEEEeCCC-Cce
Confidence 3567788999999999988776666555422345888875 4789999999888888654 4555544444433 345
Q ss_pred EEEEEEeCCeEEEEcCCCcEEEEe
Q psy17021 172 TTSCVLDYNTVASADKFGNVCIVS 195 (199)
Q Consensus 172 ta~~~Ld~~t~l~aD~~gNl~vlr 195 (199)
.++.. |...++.+..++.+.+..
T Consensus 193 ~~~s~-~~~~l~sgs~d~~i~~~d 215 (420)
T 4gga_A 193 GSLSW-NSYILSSGSRSGHIHHHD 215 (420)
T ss_dssp EEEEE-ETTEEEEEETTSEEEEEE
T ss_pred EEEee-CCCEEEEEeCCCceeEee
Confidence 55544 677788888888887764
No 104
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.79 E-value=0.48 Score=43.38 Aligned_cols=99 Identities=16% Similarity=0.183 Sum_probs=63.6
Q ss_pred cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEec--cCC
Q psy17021 94 QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFAD--DTQ 167 (199)
Q Consensus 94 ~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var--D~~ 167 (199)
+|+ |+.| ..++|++|++...+..+...- ....|.++.- .+++++.|..-.+|.+.. ........+.. ...
T Consensus 441 ~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd--~~~~~~~~~~~~~~~h 516 (694)
T 3dm0_A 441 DGQFALSGSWDGELRLWDLAAGVSTRRFVG--HTKDVLSVAFSLDNRQIVSASRDRTIKLWN--TLGECKYTISEGGEGH 516 (694)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSSCEEEEETTSCEEEEC--TTSCEEEEECSSTTSC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcceeEEeC--CCCCEEEEEEeCCCCEEEEEeCCCEEEEEE--CCCCcceeeccCCCCC
Confidence 344 4433 368999999987665443221 1223666654 467899998888888764 33333333332 345
Q ss_pred ceeEEEEEEEeC---CeEEEEcCCCcEEEEee
Q psy17021 168 PRWITTSCVLDY---NTVASADKFGNVCIVST 196 (199)
Q Consensus 168 ~~wvta~~~Ld~---~t~l~aD~~gNl~vlr~ 196 (199)
..|++++.+-.+ ..++.+..++.+.++.+
T Consensus 517 ~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~ 548 (694)
T 3dm0_A 517 RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 548 (694)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEET
T ss_pred CCcEEEEEEeCCCCcceEEEEeCCCeEEEEEC
Confidence 678999998744 36888888999888754
No 105
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.74 E-value=1.5 Score=36.20 Aligned_cols=181 Identities=12% Similarity=0.119 Sum_probs=95.3
Q ss_pred eeEEecCCCcceeec--ccCCEEEEee--cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEE-EcCceeEECC----
Q psy17021 3 FVHKTSVDEVPYAMC--PFQGALLVGV--GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTH-SGRSDRLVGN---- 73 (199)
Q Consensus 3 ~~h~t~~~~~~~~~~--~f~~~ll~~~--~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~-~~~~ri~vgd---- 73 (199)
.++..+....|.+++ +-..+|++.- .+.+++||+...++++.-... ..+. ...- ..+.+++++.
T Consensus 24 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~----~~v~---~~~~spdg~~l~~~~~~~~ 96 (391)
T 1l0q_A 24 VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG----SSPQ---GVAVSPDGKQVYVTNMASS 96 (391)
T ss_dssp EEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS----SSEE---EEEECTTSSEEEEEETTTT
T ss_pred EEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC----CCcc---ceEECCCCCEEEEEECCCC
Confidence 345555555565543 3334564543 488999999776666543322 2221 1111 1123443311
Q ss_pred --------eeeEEEeeccCCcceEEccc-cCe-EEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEE
Q psy17021 74 --------AMEFVHKTSVDEVPYAMCPF-QGA-LLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIY 139 (199)
Q Consensus 74 --------klesVh~~~~kG~v~aL~~f-~g~-LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~Il 139 (199)
..+.+......+.+.++.-- +|+ ++++. +++|++|++...+.+...... ..+..+.. .+++++
T Consensus 97 ~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~dg~~l~ 173 (391)
T 1l0q_A 97 TLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG---RSPKGIAVTPDGTKVY 173 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC---SSEEEEEECTTSSEEE
T ss_pred EEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC---CCcceEEECCCCCEEE
Confidence 12333344445566665533 344 53443 589999999877665543332 23445544 466776
Q ss_pred EEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEe-CCeEEEEc---CCCcEEEEee
Q psy17021 140 VSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLD-YNTVASAD---KFGNVCIVST 196 (199)
Q Consensus 140 VGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld-~~t~l~aD---~~gNl~vlr~ 196 (199)
+.....+- +..|+...++....... ..++.++.+-. ...++.+. .++.+.++..
T Consensus 174 ~~~~~~~~-v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 174 VANFDSMS-ISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EEETTTTE-EEEEETTTTEEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred EEeCCCCE-EEEEECCCCeEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 66554432 34456666655544433 34677777763 33555555 5778877653
No 106
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.67 E-value=0.94 Score=37.11 Aligned_cols=97 Identities=12% Similarity=0.039 Sum_probs=39.5
Q ss_pred eEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEE
Q psy17021 96 ALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITT 173 (199)
Q Consensus 96 ~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta 173 (199)
.+.++-++.+++|++...+.+..-.. ....+.++.. .+.+++.|..-..+.++..+..+ . +...........
T Consensus 307 ~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--~--~~~~~~~~~~~~ 380 (408)
T 4a11_B 307 FVFVPYGSTIAVYTVYSGEQITMLKG--HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE--P--VPDDDETTTKSQ 380 (408)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEECC--CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------------------
T ss_pred EEEEecCCEEEEEECcCCcceeeecc--CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC--c--cCCCCceEeccc
Confidence 34566789999999987765443221 1234556554 46789999998899988775422 2 222222223344
Q ss_pred EEEEeCCeEEEEcCCCcEEEEeecC
Q psy17021 174 SCVLDYNTVASADKFGNVCIVSTYR 198 (199)
Q Consensus 174 ~~~Ld~~t~l~aD~~gNl~vlr~~~ 198 (199)
....+...+..++.++.+.+...|+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 381 LNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp -------------------------
T ss_pred cccccceeecccCccCceeecCCcc
Confidence 4455666777777778877776654
No 107
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=94.45 E-value=2.1 Score=41.15 Aligned_cols=95 Identities=18% Similarity=0.106 Sum_probs=60.7
Q ss_pred Ce-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEec------
Q psy17021 95 GA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFAD------ 164 (199)
Q Consensus 95 g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var------ 164 (199)
|+ |+.+ -.++|++|++...+++..-.. +..+.++.. .++++++|+.-..|.++. ...+++....-
T Consensus 69 g~~L~S~s~D~~v~lWd~~~~~~~~~~~~---~~~V~~v~~sp~g~~l~sgs~dg~V~lwd--~~~~~~~~~~i~~~~~~ 143 (902)
T 2oaj_A 69 GIYLVVINAKDTVYVLSLYSQKVLTTVFV---PGKITSIDTDASLDWMLIGLQNGSMIVYD--IDRDQLSSFKLDNLQKS 143 (902)
T ss_dssp TTEEEEEETTCEEEEEETTTCSEEEEEEC---SSCEEEEECCTTCSEEEEEETTSCEEEEE--TTTTEEEEEEECCHHHH
T ss_pred CCEEEEEECcCeEEEEECCCCcEEEEEcC---CCCEEEEEECCCCCEEEEEcCCCcEEEEE--CCCCccccceecccccc
Confidence 65 4433 368999999987765543332 234555554 578999999988887764 44555432211
Q ss_pred ----cCCceeEEEEEEEe--CCeEEEEcCCCcEEEEe
Q psy17021 165 ----DTQPRWITTSCVLD--YNTVASADKFGNVCIVS 195 (199)
Q Consensus 165 ----D~~~~wvta~~~Ld--~~t~l~aD~~gNl~vlr 195 (199)
.....+|+++++-. .+.++.+..++.+ +..
T Consensus 144 ~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd 179 (902)
T 2oaj_A 144 SFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYS 179 (902)
T ss_dssp HTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEE
T ss_pred ccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEE
Confidence 12345788888873 3478888888877 664
No 108
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.43 E-value=1.6 Score=35.22 Aligned_cols=114 Identities=7% Similarity=0.031 Sum_probs=68.2
Q ss_pred CCcceEEcccc---CeEEE--EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---------------CCEEEEEec
Q psy17021 84 DEVPYAMCPFQ---GALLV--GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---------------GHRIYVSDV 143 (199)
Q Consensus 84 kG~v~aL~~f~---g~LLa--avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---------------~~~IlVGD~ 143 (199)
.++++++.--. |.+|+ +-.++|++|++.................+.++.-. +.+++.|..
T Consensus 99 ~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~ 178 (297)
T 2pm7_B 99 SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 178 (297)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEET
T ss_pred CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcC
Confidence 45666654322 54443 33689999999754211111111111234444432 358999999
Q ss_pred cccEEEEEEeCCCCeEEEEe-ccCCceeEEEEEEEeC----CeEEEEcCCCcEEEEeec
Q psy17021 144 QESVFLVRYKRYENQLLIFA-DDTQPRWITTSCVLDY----NTVASADKFGNVCIVSTY 197 (199)
Q Consensus 144 ~~Sv~ll~y~~~~~~l~~va-rD~~~~wvta~~~Ld~----~t~l~aD~~gNl~vlr~~ 197 (199)
-..|.+..++.......... -.....+|+++.+-.+ ..++.+..++.+.+....
T Consensus 179 D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 89999998876554332221 1234668999998743 467788888998887653
No 109
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.40 E-value=1.2 Score=36.81 Aligned_cols=113 Identities=13% Similarity=0.168 Sum_probs=73.3
Q ss_pred ccCCcceEEcccc-C-eEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---CCEEEEEeccccEEEEEEeC
Q psy17021 82 SVDEVPYAMCPFQ-G-ALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---GHRIYVSDVQESVFLVRYKR 154 (199)
Q Consensus 82 ~~kG~v~aL~~f~-g-~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD~~~Sv~ll~y~~ 154 (199)
..++.++++.--. | +++|+. ..+|++|++...+.............|.++.-. +++++.|..-.++.++..+
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~- 149 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS- 149 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT-
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC-
Confidence 4456777765333 3 344333 579999999876644433322123357777764 4789999888888877653
Q ss_pred CCCeEEEEeccC-CceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 155 YENQLLIFADDT-QPRWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 155 ~~~~l~~varD~-~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
.+.+..+.... ...+++++.+- |...++.++.++.+.++.+
T Consensus 150 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 192 (383)
T 3ei3_B 150 -GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL 192 (383)
T ss_dssp -SCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred -CCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC
Confidence 45555554432 35778888887 4457888899999988764
No 110
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.38 E-value=1.3 Score=37.22 Aligned_cols=115 Identities=11% Similarity=0.063 Sum_probs=67.4
Q ss_pred ccCCcceEEccc-cC-eEEEEeCCEEEEEEcCC-cceeeee-----eccCcCceEEEEEEe--C-CEEEEEeccccEEEE
Q psy17021 82 SVDEVPYAMCPF-QG-ALLVGVGRYLRLYDLGK-KKLLRKC-----ENKHLPNLIVKIESM--G-HRIYVSDVQESVFLV 150 (199)
Q Consensus 82 ~~kG~v~aL~~f-~g-~LLaavg~~v~vy~l~~-~~Ll~~~-----~~~~~~~~i~~l~~~--~-~~IlVGD~~~Sv~ll 150 (199)
...++++++.-- +| .|+.|-.++|++|++.. .+..... ........+.++.-. + ++++.|..-..|.++
T Consensus 175 ~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 254 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC 254 (447)
T ss_dssp CCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred CCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE
Confidence 345666665432 34 46666678999999983 3332211 121122346666653 4 799999998888887
Q ss_pred EEeCCCC---eEEEEeccCCc----------eeEEEEEEEeCC-eEEEEcCCCcEEEEeec
Q psy17021 151 RYKRYEN---QLLIFADDTQP----------RWITTSCVLDYN-TVASADKFGNVCIVSTY 197 (199)
Q Consensus 151 ~y~~~~~---~l~~varD~~~----------~wvta~~~Ld~~-t~l~aD~~gNl~vlr~~ 197 (199)
..+.... ....+..+..+ ..++++.+-.++ .++.++. +.+.++.+.
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 255 DMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp ETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred ECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence 6543221 02333222211 278888887444 5666666 999888653
No 111
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.35 E-value=1.6 Score=34.88 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=56.5
Q ss_pred CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeC
Q psy17021 102 GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY 179 (199)
Q Consensus 102 g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~ 179 (199)
...+++|++...+++..-.- -...+.++.. .+++++.|..-..+.++.. ...+....-. ....++++.+-++
T Consensus 194 d~~i~i~d~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~--~~~~~~~~~~--~~~~v~~~~~~~~ 267 (340)
T 4aow_A 194 DKLVKVWNLANCKLKTNHIG--HTGYLNTVTVSPDGSLCASGGKDGQAMLWDL--NEGKHLYTLD--GGDIINALCFSPN 267 (340)
T ss_dssp TSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEEETTCEEEEEET--TTTEEEEEEE--CSSCEEEEEECSS
T ss_pred CCEEEEEECCCCceeeEecC--CCCcEEEEEECCCCCEEEEEeCCCeEEEEEe--ccCceeeeec--CCceEEeeecCCC
Confidence 57899999988765443221 1234666665 4679999988778777644 3332222212 2346788888777
Q ss_pred CeEEEEcCCCcEEEEee
Q psy17021 180 NTVASADKFGNVCIVST 196 (199)
Q Consensus 180 ~t~l~aD~~gNl~vlr~ 196 (199)
+.++.+-.++.+.++.+
T Consensus 268 ~~~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 268 RYWLCAATGPSIKIWDL 284 (340)
T ss_dssp SSEEEEEETTEEEEEET
T ss_pred CceeeccCCCEEEEEEC
Confidence 77777767788777643
No 112
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.32 E-value=1 Score=37.03 Aligned_cols=29 Identities=17% Similarity=0.115 Sum_probs=22.4
Q ss_pred CceeEEEEEEEeCC-----eEEEEcCCCcEEEEe
Q psy17021 167 QPRWITTSCVLDYN-----TVASADKFGNVCIVS 195 (199)
Q Consensus 167 ~~~wvta~~~Ld~~-----t~l~aD~~gNl~vlr 195 (199)
....++++.+...+ .++.+-.+|.|.+..
T Consensus 343 H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWd 376 (377)
T 3dwl_C 343 HQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWT 376 (377)
T ss_dssp CSSCEEEEEEEEEETTEEEEEEEEETTSEEEEEC
T ss_pred ccceeEEEeccCCCCCceEEEEeecCCCcEEEec
Confidence 56678899887554 588888899988764
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.13 E-value=1.7 Score=34.35 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=62.9
Q ss_pred cCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeE
Q psy17021 94 QGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWI 171 (199)
Q Consensus 94 ~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wv 171 (199)
+|.|.+|.+++|++|+....++++..........|.++.- .+++++.|..-.+|.+.. .+.++....-..+.. .+
T Consensus 36 ~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~--~~~~~~~~~~~~h~~-~~ 112 (318)
T 4ggc_A 36 GNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWD--VQQQKRLRNMTSHSA-RV 112 (318)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEE--TTTTEEEEEEECCSS-CE
T ss_pred CCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEee--cCCceeEEEecCccc-eE
Confidence 3556688899999999988777666554322335777775 468999999888887764 455555444444433 23
Q ss_pred EEEEEEeCCeEEEEcCCCcEEEEe
Q psy17021 172 TTSCVLDYNTVASADKFGNVCIVS 195 (199)
Q Consensus 172 ta~~~Ld~~t~l~aD~~gNl~vlr 195 (199)
.+... +...++.+..++.+....
T Consensus 113 ~~~~~-~~~~l~s~~~~~~~~~~~ 135 (318)
T 4ggc_A 113 GSLSW-NSYILSSGSRSGHIHHHD 135 (318)
T ss_dssp EEEEE-ETTEEEEEETTSEEEEEE
T ss_pred EEeec-CCCEEEEEecCCceEeee
Confidence 33332 555666677777665543
No 114
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=93.98 E-value=1.4 Score=42.79 Aligned_cols=102 Identities=10% Similarity=0.167 Sum_probs=67.1
Q ss_pred EEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCeEEEEecc
Q psy17021 89 AMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQLLIFADD 165 (199)
Q Consensus 89 aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD 165 (199)
++.|-...+++|- ++.+++|++...+........ ...+.++. ..+++++.|..-.++.++.. ..++...+ -
T Consensus 968 ~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h--~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~--~~~~~~~~--~ 1041 (1249)
T 3sfz_A 968 CLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGH--KKAVRHIQFTADGKTLISSSEDSVIQVWNW--QTGDYVFL--Q 1041 (1249)
T ss_dssp EECTTSSEEEEEETTSCCEEEETTTTSCEEECCCC--SSCCCCEEECSSSSCEEEECSSSBEEEEET--TTTEEECC--B
T ss_pred EEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccC--CCceEEEEECCCCCEEEEEcCCCEEEEEEC--CCCceEEE--e
Confidence 3444444555544 578999999876654432211 12344444 45778899988778777654 44544432 3
Q ss_pred CCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021 166 TQPRWITTSCVLDYNTVASADKFGNVCIVST 196 (199)
Q Consensus 166 ~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~ 196 (199)
..+..++++.+..++.++.+..++.+.++..
T Consensus 1042 ~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~ 1072 (1249)
T 3sfz_A 1042 AHQETVKDFRLLQDSRLLSWSFDGTVKVWNV 1072 (1249)
T ss_dssp CCSSCEEEEEECSSSEEEEEESSSEEEEEET
T ss_pred cCCCcEEEEEEcCCCcEEEEECCCcEEEEEC
Confidence 4567888999988888999999999988765
No 115
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.97 E-value=1.4 Score=35.99 Aligned_cols=71 Identities=11% Similarity=0.191 Sum_probs=41.9
Q ss_pred CCcceEEc---cccCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe----CCEEEEEeccccEEEEEEeC
Q psy17021 84 DEVPYAMC---PFQGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM----GHRIYVSDVQESVFLVRYKR 154 (199)
Q Consensus 84 kG~v~aL~---~f~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~----~~~IlVGD~~~Sv~ll~y~~ 154 (199)
+++|+++. +..|.+||+ -.++|++|++...+......+......+.++.-. +.+++.|..-..+.+..++.
T Consensus 57 ~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 57 EGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp SSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred CccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 45566654 223554443 3689999999765322222222111235555542 56899999999999988754
No 116
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=93.69 E-value=2.5 Score=34.75 Aligned_cols=107 Identities=11% Similarity=0.129 Sum_probs=64.2
Q ss_pred CcceEEccc-cCeEEE-E-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeE
Q psy17021 85 EVPYAMCPF-QGALLV-G-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQL 159 (199)
Q Consensus 85 G~v~aL~~f-~g~LLa-a-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l 159 (199)
++|+++.-- +|.+++ | -.++|++|++...+.++...- -...+.++.- .+++++.|..-..+.+.... ....
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~--~~~~ 152 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG--HQSEVYSVAFSPDNRQILSAGAEREIKLWNIL--GECK 152 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC--CCSCEEEEEECSSTTEEEEEETTSCEEEEESS--SCEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC--CCCcEEEEEECCCCCEEEEEcCCCEEEEEecc--CCce
Confidence 445544322 344443 3 368999999987665443221 1223566654 57799999988888887643 2222
Q ss_pred EEEe-ccCCceeEEEEEEEeC-----------CeEEEEcCCCcEEEEe
Q psy17021 160 LIFA-DDTQPRWITTSCVLDY-----------NTVASADKFGNVCIVS 195 (199)
Q Consensus 160 ~~va-rD~~~~wvta~~~Ld~-----------~t~l~aD~~gNl~vlr 195 (199)
.... ......|++++.+-.. ..++.+..++.+.++.
T Consensus 153 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 200 (343)
T 2xzm_R 153 FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN 200 (343)
T ss_dssp EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE
T ss_pred eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc
Confidence 2222 2245668888887643 3577777788877764
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.69 E-value=2 Score=33.75 Aligned_cols=102 Identities=16% Similarity=0.021 Sum_probs=61.6
Q ss_pred CeEEEEeCCEEEEEEc-CCcceeeeeeccCcCceEEEEEEe--C----CEEEEEeccccEEEEEEeCCCC----------
Q psy17021 95 GALLVGVGRYLRLYDL-GKKKLLRKCENKHLPNLIVKIESM--G----HRIYVSDVQESVFLVRYKRYEN---------- 157 (199)
Q Consensus 95 g~LLaavg~~v~vy~l-~~~~Ll~~~~~~~~~~~i~~l~~~--~----~~IlVGD~~~Sv~ll~y~~~~~---------- 157 (199)
..++++-.....+|.. ...++............+.++... + ++++.|..-..|.++.......
T Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 262 (351)
T 3f3f_A 183 EKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTN 262 (351)
T ss_dssp CEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------
T ss_pred cEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccc
Confidence 3455555544445544 444443333333223347777754 3 5899999888999998765311
Q ss_pred ----------------------------------eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 158 ----------------------------------QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 158 ----------------------------------~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
+....-+ .....++++.+- |...++.+..+|.+.++.+.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 263 SNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD-DHNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp ----------------------------CCSEEEEEEEEEC-TTSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred eeccCCCcccccccccccccccceeeeecccccccEEEEEe-cccccEEEEEEcCCCCEEEEecCCCcEEEEecC
Confidence 1111111 234568888887 44578889999999999875
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.68 E-value=2.5 Score=34.77 Aligned_cols=155 Identities=10% Similarity=0.081 Sum_probs=81.7
Q ss_pred CeeEEEecchhhhhhhhhhcccccCceeeeeEEEE-EcCceeEE------------CCeeeEEEeeccCCcceEEccc-c
Q psy17021 29 RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTH-SGRSDRLV------------GNAMEFVHKTSVDEVPYAMCPF-Q 94 (199)
Q Consensus 29 ~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~-~~~~ri~v------------gdklesVh~~~~kG~v~aL~~f-~ 94 (199)
+.+++||+...++++.-... ..+. .... ..+.++++ ....+.+......+.+.++.-- +
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~----~~~~---~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spd 84 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVG----SNPM---GAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPD 84 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS----SSEE---EEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTT
T ss_pred CEEEEEECCCCeEEEEeecC----CCcc---eEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCC
Confidence 78999999877666533222 1111 1111 11223322 1233445555556677765533 3
Q ss_pred Ce-EEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCce
Q psy17021 95 GA-LLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPR 169 (199)
Q Consensus 95 g~-LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~ 169 (199)
|+ |+++- .++|++|++...+.+..... +..+.++.. .++++++..-... .+..|+...++....-... .
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~-~v~~~d~~~~~~~~~~~~~--~ 158 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKT---GKSPLGLALSPDGKKLYVTNNGDK-TVSVINTVTKAVINTVSVG--R 158 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEETTTT-EEEEEETTTTEEEEEEECC--S
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEEEeC---CCCcceEEECCCCCEEEEEeCCCC-EEEEEECCCCcEEEEEecC--C
Confidence 44 54444 37999999987765544332 233555554 3567755544333 3444666565554443322 2
Q ss_pred eEEEEEEEeCC-eE-EEEcCCCcEEEEee
Q psy17021 170 WITTSCVLDYN-TV-ASADKFGNVCIVST 196 (199)
Q Consensus 170 wvta~~~Ld~~-t~-l~aD~~gNl~vlr~ 196 (199)
.+.++.+-.++ .+ +.+..++.+.++..
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 34566665333 44 45566677777653
No 119
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.54 E-value=2.9 Score=35.07 Aligned_cols=88 Identities=10% Similarity=0.076 Sum_probs=49.7
Q ss_pred EEccccCeE-EEEeC---CEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEE
Q psy17021 89 AMCPFQGAL-LVGVG---RYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIF 162 (199)
Q Consensus 89 aL~~f~g~L-Laavg---~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~v 162 (199)
++.| +|++ ++|-+ ++|++|++...+.+..-... ..|.++.- .+.+++.|. -.++.++. ..........
T Consensus 140 ~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~---~~V~~v~fspdg~~l~s~s-~~~~~~~~-~~~~~~~~~~ 213 (365)
T 4h5i_A 140 YISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEIETR---GEVKDLHFSTDGKVVAYIT-GSSLEVIS-TVTGSCIARK 213 (365)
T ss_dssp EECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEEECS---SCCCEEEECTTSSEEEEEC-SSCEEEEE-TTTCCEEEEE
T ss_pred EEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEeCCC---CceEEEEEccCCceEEecc-ceeEEEEE-eccCcceeee
Confidence 3444 4554 44543 68999999877654443332 23445543 467877775 34544332 2223333333
Q ss_pred eccCCceeEEEEEEEeCCeE
Q psy17021 163 ADDTQPRWITTSCVLDYNTV 182 (199)
Q Consensus 163 arD~~~~wvta~~~Ld~~t~ 182 (199)
-.......++++.|..++.+
T Consensus 214 ~~~~~~~~v~~v~fspdg~~ 233 (365)
T 4h5i_A 214 TDFDKNWSLSKINFIADDTV 233 (365)
T ss_dssp CCCCTTEEEEEEEEEETTEE
T ss_pred ecCCCCCCEEEEEEcCCCCE
Confidence 34445677889999877643
No 120
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=93.47 E-value=1.8 Score=36.19 Aligned_cols=108 Identities=6% Similarity=0.021 Sum_probs=58.6
Q ss_pred cceEEccc-cC-eEEEEeCCEEEEEEcCC-cceeeeeeccCc-C--------------ceEEEEEEeCCEEEEEeccccE
Q psy17021 86 VPYAMCPF-QG-ALLVGVGRYLRLYDLGK-KKLLRKCENKHL-P--------------NLIVKIESMGHRIYVSDVQESV 147 (199)
Q Consensus 86 ~v~aL~~f-~g-~LLaavg~~v~vy~l~~-~~Ll~~~~~~~~-~--------------~~i~~l~~~~~~IlVGD~~~Sv 147 (199)
+++++.-- +| .|+++-.+.|++|++.. .+.+........ . .+.......+.+++.|..-..|
T Consensus 287 ~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v 366 (447)
T 3dw8_B 287 SISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFF 366 (447)
T ss_dssp CEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEE
T ss_pred eEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEE
Confidence 56654432 34 45566668999999975 443332211100 0 0113444457788888887787
Q ss_pred EEEEEeCCCCeEEEEeccC-------------------------------CceeEEEEEEEeCCeEEEEcCCCcEEEEe
Q psy17021 148 FLVRYKRYENQLLIFADDT-------------------------------QPRWITTSCVLDYNTVASADKFGNVCIVS 195 (199)
Q Consensus 148 ~ll~y~~~~~~l~~varD~-------------------------------~~~wvta~~~Ld~~t~l~aD~~gNl~vlr 195 (199)
.++..+ .++...+..+. ....++++++-.++.+|++=...|++++.
T Consensus 367 ~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~ 443 (447)
T 3dw8_B 367 RMFDRN--TKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQ 443 (447)
T ss_dssp EEEETT--TCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEE
T ss_pred EEEEcC--CCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeeeec
Confidence 776543 33333222111 12345666666555566555666788874
No 121
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.43 E-value=0.48 Score=40.66 Aligned_cols=113 Identities=21% Similarity=0.312 Sum_probs=72.3
Q ss_pred ccCCcceEEc--cccCeEEE-E-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeC
Q psy17021 82 SVDEVPYAMC--PFQGALLV-G-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKR 154 (199)
Q Consensus 82 ~~kG~v~aL~--~f~g~LLa-a-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~ 154 (199)
..++.|+|++ |-++.+|| | -..+|++|++...+.........-...|.+|.- .+++++.|..-.+|.++.+
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~-- 194 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF-- 194 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET--
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec--
Confidence 3455566654 45565554 3 368999999975543222222211224667764 3678999987778877643
Q ss_pred CCCeEEEEe-ccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 155 YENQLLIFA-DDTQPRWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 155 ~~~~l~~va-rD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
+.+.+..+. .+....|++++.+- |...++.++.+|++.++..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~ 238 (435)
T 4e54_B 195 KGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNM 238 (435)
T ss_dssp TSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEES
T ss_pred cCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeecc
Confidence 455554444 45567788888887 4457888999999988764
No 122
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.39 E-value=3.1 Score=34.87 Aligned_cols=99 Identities=9% Similarity=0.086 Sum_probs=62.6
Q ss_pred eEEEEe-CCEEEEEEcCCcceeeeee--c-cCcCceEEEEEE---eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCc
Q psy17021 96 ALLVGV-GRYLRLYDLGKKKLLRKCE--N-KHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQP 168 (199)
Q Consensus 96 ~LLaav-g~~v~vy~l~~~~Ll~~~~--~-~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~ 168 (199)
.|+.|- .+++++|++...+.+.... . ......+.++.. .+++++.|..-..|.++..+.....+..+.. ..
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~--h~ 249 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG--HE 249 (380)
T ss_dssp CEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC--CS
T ss_pred EEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC--cC
Confidence 355444 5889999998765443221 1 111224666665 4679999998888888765433333333322 34
Q ss_pred eeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 169 RWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 169 ~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
.+|+++.+- |...++.+..++.+.++.+
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDDGTCRLFDM 278 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSSSCEEEEET
T ss_pred CCeEEEEEecCCCeEEEEcCCCeEEEEEC
Confidence 567788887 4457888888998888753
No 123
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.06 E-value=2.7 Score=33.26 Aligned_cols=178 Identities=11% Similarity=0.104 Sum_probs=91.8
Q ss_pred cceeeccc-CCEEEEee--cCeeEEEecchhhhhhhhhhcc---cccCceeeeeEEEE-EcCceeEECCe--eeEEEeec
Q psy17021 12 VPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKV---RIKGFRKAHQTHTH-SGRSDRLVGNA--MEFVHKTS 82 (199)
Q Consensus 12 ~~~~~~~f-~~~ll~~~--~~~l~~y~~g~k~ll~k~~~~~---~~~~~~~~~~~~~~-~~~~ri~vgdk--lesVh~~~ 82 (199)
.|.+++-- .|+++|+- .+.+++||...+ .++.-.... .....+ ..+.. ..++++++++. -..+....
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~~~~~~~~~~~p---~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKEGR-FKFQFGECGKRDSQLLYP---NRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTSC-EEEEECCBSSSTTCBSSE---EEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCCCc-EEEEecccCCCcccccCc---eEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 46766533 57887773 367999997533 333211100 000122 12222 13456655431 12222221
Q ss_pred cC------------CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEecccc
Q psy17021 83 VD------------EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQES 146 (199)
Q Consensus 83 ~k------------G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~S 146 (199)
-+ ..++++..- +|+++++- ++.|.+|+...+.+ ...........+..+... ++.++|+|....
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 185 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVL-HKFGCSKHLEFPNGVVVNDKQEIFISDNRAH 185 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEE-EEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEE-EEeCCCCccCCcEEEEECCCCCEEEEECCCC
Confidence 11 234444322 57787775 57899998654433 222211112346677764 357889987654
Q ss_pred EEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCC--cEEEEe
Q psy17021 147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG--NVCIVS 195 (199)
Q Consensus 147 v~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~g--Nl~vlr 195 (199)
.+..|++....+..+..+-...+.+++.+=.++.++++|... .|.++.
T Consensus 186 -~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~ 235 (286)
T 1q7f_A 186 -CVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT 235 (286)
T ss_dssp -EEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred -EEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEEC
Confidence 255667766666666654333566666654445677777654 466553
No 124
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.04 E-value=3.4 Score=34.34 Aligned_cols=173 Identities=10% Similarity=-0.024 Sum_probs=88.5
Q ss_pred ecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCce------eeeeEEEEEcCceeEECCe-----------eeE
Q psy17021 16 MCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFR------KAHQTHTHSGRSDRLVGNA-----------MEF 77 (199)
Q Consensus 16 ~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~------~~~~~~~~~~~~ri~vgdk-----------les 77 (199)
.+...|++++|.. ..|..||....+++-+.... .|... ..+...-...+++++++.. -+.
T Consensus 184 ~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~ 261 (376)
T 3q7m_A 184 PTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRIS--QATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI 261 (376)
T ss_dssp CEEETTEEEECCTTTEEEEEETTTCCEEEEEECC--C-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCE
T ss_pred cEEECCEEEEEcCCCEEEEEECCCCcEEEEEecc--cCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcE
Confidence 3444899999985 57999998554555433322 11000 0000000111345544321 122
Q ss_pred EEeeccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCC
Q psy17021 78 VHKTSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 78 Vh~~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
+...... ...++..-.+.|.++- +..|..++....+.+-..... ......+....++.+++|+--.. +..|+...
T Consensus 262 ~w~~~~~-~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~l~v~~~~g~--l~~~d~~t 337 (376)
T 3q7m_A 262 MWKRELG-SVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDL-LHRLLTSPVLYNGNLVVGDSEGY--LHWINVED 337 (376)
T ss_dssp EEEECCC-CEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTT-TTSCCCCCEEETTEEEEECTTSE--EEEEETTT
T ss_pred EeeccCC-CCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeeccc-CCCcccCCEEECCEEEEEeCCCe--EEEEECCC
Confidence 2223322 2334444466777665 458888998766544332211 01122233346899999987544 44456666
Q ss_pred CeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEe
Q psy17021 157 NQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVS 195 (199)
Q Consensus 157 ~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr 195 (199)
+++.--.+- ....+.+.-.+.++++++++.+|.|+.++
T Consensus 338 G~~~~~~~~-~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 338 GRFVAQQKV-DSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CCEEEEEEC-CTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred CcEEEEEec-CCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 654322221 11222333344678888889999999885
No 125
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=93.00 E-value=2.5 Score=32.83 Aligned_cols=177 Identities=11% Similarity=0.009 Sum_probs=91.9
Q ss_pred cceeeccc-CCEEEEee-cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCee-eEEEeec------
Q psy17021 12 VPYAMCPF-QGALLVGV-GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAM-EFVHKTS------ 82 (199)
Q Consensus 12 ~~~~~~~f-~~~ll~~~-~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdkl-esVh~~~------ 82 (199)
.|.+++-- .|+|.++- ++.+..||...++...-.... . ..+. .+....++++++++.. ..+....
T Consensus 68 ~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~--~-~~p~---~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDG--L-NYPE---GLAVDTQGAVYVADRGNNRVVKLAAGSKTQ 141 (270)
T ss_dssp SCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCS--C-SSEE---EEEECTTCCEEEEEGGGTEEEEECTTCCSC
T ss_pred CcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCC--c-CCCc---ceEECCCCCEEEEECCCCEEEEEECCCcee
Confidence 56666543 57888887 478999997654432111011 0 1221 2222223456654311 1111111
Q ss_pred ----cC--CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCC-EEEEEeccccEEEEEE
Q psy17021 83 ----VD--EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH-RIYVSDVQESVFLVRY 152 (199)
Q Consensus 83 ----~k--G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~-~IlVGD~~~Sv~ll~y 152 (199)
.. ..+++++.- +|++.++- ++.|..|+.......... .. ....+..|....+ .++|+|.... .+.+|
T Consensus 142 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~-~~~~p~~i~~d~~g~l~v~~~~~~-~v~~~ 218 (270)
T 1rwi_B 142 TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP-FT-DITAPWGIAVDEAGTVYVTEHNTN-QVVKL 218 (270)
T ss_dssp EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC-CS-SCCSEEEEEECTTCCEEEEETTTS-CEEEE
T ss_pred EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec-cc-CCCCceEEEECCCCCEEEEECCCC-cEEEE
Confidence 11 134444332 57777765 468999988665432221 11 1134677776543 8899997553 24556
Q ss_pred eCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEc-CCCcEEEEeecC
Q psy17021 153 KRYENQLLIFADDTQPRWITTSCVLDYNTVASAD-KFGNVCIVSTYR 198 (199)
Q Consensus 153 ~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD-~~gNl~vlr~~~ 198 (199)
+++.......... ...+++++.+-.++.+.++| ..+.|.++++++
T Consensus 219 ~~~~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 219 LAGSTTSTVLPFT-GLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp CTTCSCCEECCCC-SCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred cCCCCcceeeccC-CCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 6655443332221 22466777664344566665 466788887765
No 126
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=92.77 E-value=3.2 Score=33.35 Aligned_cols=183 Identities=15% Similarity=0.158 Sum_probs=95.9
Q ss_pred EEecCCCccee--ecccCCEEEEee--------cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEEC--
Q psy17021 5 HKTSVDEVPYA--MCPFQGALLVGV--------GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVG-- 72 (199)
Q Consensus 5 h~t~~~~~~~~--~~~f~~~ll~~~--------~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vg-- 72 (199)
+..++..-|.. +.+-.+++.++. .+.+.+||+...+.++.-.... -|..+ .+ ...+.++++.
T Consensus 35 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~----~~-s~dg~~l~v~~~ 108 (353)
T 3vgz_A 35 LRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGA----TI-NNTTQTLWFGNT 108 (353)
T ss_dssp EEEEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSE----EE-ETTTTEEEEEET
T ss_pred hhhhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceE----EE-CCCCCEEEEEec
Confidence 34455555654 345556888877 4579999997766665443321 12211 11 1112234332
Q ss_pred ----------CeeeEEEeeccCCc----------ce--EEccccCeEEEEe---CCEEEEEEcCCcceeeeeeccCcCce
Q psy17021 73 ----------NAMEFVHKTSVDEV----------PY--AMCPFQGALLVGV---GRYLRLYDLGKKKLLRKCENKHLPNL 127 (199)
Q Consensus 73 ----------dklesVh~~~~kG~----------v~--aL~~f~g~LLaav---g~~v~vy~l~~~~Ll~~~~~~~~~~~ 127 (199)
+..+.+......+. +. ++.|-.++++++- +++|.+|+....+.............
T Consensus 109 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 188 (353)
T 3vgz_A 109 VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMST 188 (353)
T ss_dssp TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCC
T ss_pred CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccc
Confidence 11222233333221 22 3333334566665 57799999987766554331111122
Q ss_pred EEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEec---cCCceeEEEEEEE-eCCeEEEEcCC-CcEEEEe
Q psy17021 128 IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFAD---DTQPRWITTSCVL-DYNTVASADKF-GNVCIVS 195 (199)
Q Consensus 128 i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var---D~~~~wvta~~~L-d~~t~l~aD~~-gNl~vlr 195 (199)
...+...++++++++.-..+. .|+...++...... +....++.++.+- |.+.+++++.. +.++++.
T Consensus 189 ~~~~s~dg~~l~~~~~~~~i~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 259 (353)
T 3vgz_A 189 GLALDSEGKRLYTTNADGELI--TIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVD 259 (353)
T ss_dssp CCEEETTTTEEEEECTTSEEE--EEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEE
T ss_pred eEEECCCCCEEEEEcCCCeEE--EEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 334445678999998755554 56776665543322 1234456666665 34456666654 6676664
No 127
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.61 E-value=6.5 Score=36.56 Aligned_cols=149 Identities=15% Similarity=0.216 Sum_probs=87.0
Q ss_pred CcceeecccC-CEEEEee-cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEee-------
Q psy17021 11 EVPYAMCPFQ-GALLVGV-GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKT------- 81 (199)
Q Consensus 11 ~~~~~~~~f~-~~ll~~~-~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~------- 81 (199)
..+.+++.-+ |+|.+|. ++.|..||.+.++.-.-.... .++. ..+..+....++++.+|-.-.-+...
T Consensus 363 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~-~~~~--~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENR-ELLS--NSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKF 439 (781)
T ss_dssp SCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC------CCC--SBEEEEEECTTSCEEEEETTEEEEEECSSSCEE
T ss_pred cceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCC-CCCC--cceEEEEECCCCCEEEEeccCCEEEEcCCCCcE
Confidence 4567777764 9999999 788999998764432110000 0111 12444444445677765321111111
Q ss_pred -cc------CCcceEEccc-cCeEEEEeCCEEEEEEcCCcceeeeeecc---CcCceEEEEEEe-CCEEEEEeccccEEE
Q psy17021 82 -SV------DEVPYAMCPF-QGALLVGVGRYLRLYDLGKKKLLRKCENK---HLPNLIVKIESM-GHRIYVSDVQESVFL 149 (199)
Q Consensus 82 -~~------kG~v~aL~~f-~g~LLaavg~~v~vy~l~~~~Ll~~~~~~---~~~~~i~~l~~~-~~~IlVGD~~~Sv~l 149 (199)
.+ ...++++..- +|.|.+|..+-|..|+....+........ .....+.++... ++.|.+|-.-.+ +
T Consensus 440 ~~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G--l 517 (781)
T 3v9f_A 440 QIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG--V 517 (781)
T ss_dssp EECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC--E
T ss_pred EEeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC--E
Confidence 11 2456777655 57899998889999998765543322111 012457777653 567888887666 5
Q ss_pred EEEeCCCCeEEEEec
Q psy17021 150 VRYKRYENQLLIFAD 164 (199)
Q Consensus 150 l~y~~~~~~l~~var 164 (199)
.+|+++.+++..+..
T Consensus 518 ~~~~~~~~~~~~~~~ 532 (781)
T 3v9f_A 518 GIYTPDMQLVRKFNQ 532 (781)
T ss_dssp EEECTTCCEEEEECT
T ss_pred EEEeCCCCeEEEccC
Confidence 668877777766543
No 128
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=92.60 E-value=4.8 Score=35.00 Aligned_cols=106 Identities=13% Similarity=0.085 Sum_probs=63.9
Q ss_pred cCCcceEEccc-cCeEEE-E-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021 83 VDEVPYAMCPF-QGALLV-G-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~LLa-a-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
.++++.++.-- +|+.|| | -+..|++|+...+.+...... ...+.++.. .+.+++.|..-..+.++ +....
T Consensus 384 ~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~---~~~v~~~~~s~d~~~l~~~~~d~~v~~w--~~~~~ 458 (577)
T 2ymu_A 384 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH---SSSVWGVAFSPDDQTIASASDDKTVKLW--NRNGQ 458 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECC---SSCEEEEEECTTSSEEEEEETTSEEEEE--ETTSC
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCC---CCCeEEEEECCCCCEEEEEcCCCEEEEE--ECCCC
Confidence 45666665422 344443 3 367899999755433222222 234566654 46688888877777665 44445
Q ss_pred eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEe
Q psy17021 158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVS 195 (199)
Q Consensus 158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr 195 (199)
.+..+.. ....++++.+- |...++.+..++.+.++.
T Consensus 459 ~~~~~~~--~~~~v~~~~~spd~~~las~~~d~~i~iw~ 495 (577)
T 2ymu_A 459 LLQTLTG--HSSSVRGVAFSPDGQTIASASDDKTVKLWN 495 (577)
T ss_dssp EEEEEEC--CSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred EEEEEcC--CCCCEEEEEEcCCCCEEEEEeCCCEEEEEc
Confidence 4544433 34567888887 444677788888888764
No 129
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.55 E-value=5.8 Score=35.84 Aligned_cols=95 Identities=12% Similarity=0.113 Sum_probs=54.6
Q ss_pred CEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccc---cEEEEEEeCCCC-eEEEEeccCCceeE---EE
Q psy17021 103 RYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQE---SVFLVRYKRYEN-QLLIFADDTQPRWI---TT 173 (199)
Q Consensus 103 ~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~---Sv~ll~y~~~~~-~l~~varD~~~~wv---ta 173 (199)
.+|++|++...+............++.++.- .+++|+++..-+ ...+..|+...+ ....+..+....|+ .+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 5688899876654332211112245666654 466788765432 356777887776 66666555455554 44
Q ss_pred EEEEe--CC-eEEEEcCCCcEEEEeec
Q psy17021 174 SCVLD--YN-TVASADKFGNVCIVSTY 197 (199)
Q Consensus 174 ~~~Ld--~~-t~l~aD~~gNl~vlr~~ 197 (199)
+.+-. ++ .++.++.++...++.++
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEE
Confidence 55553 43 45566677766666554
No 130
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.40 E-value=3.2 Score=32.46 Aligned_cols=176 Identities=10% Similarity=0.036 Sum_probs=94.3
Q ss_pred Ccceeeccc-CCEEEEee--cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-eeEEEeeccC--
Q psy17021 11 EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-MEFVHKTSVD-- 84 (199)
Q Consensus 11 ~~~~~~~~f-~~~ll~~~--~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-lesVh~~~~k-- 84 (199)
..|.+++.- +|+|.++. ++.+..||.. .+..+-. .|........+....++++++++. -..+.....+
T Consensus 99 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~-----~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 172 (299)
T 2z2n_A 99 SAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKIREYE-----LPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGD 172 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEE-----CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCC
T ss_pred CCceeeEECCCCCEEEEecCCceEEEECCC-CCEEEec-----CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCc
Confidence 457776654 58998876 4679999873 2221111 111001111222233346655331 0111111111
Q ss_pred ----------CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEE
Q psy17021 85 ----------EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLV 150 (199)
Q Consensus 85 ----------G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll 150 (199)
..+.+++.- +|+|.++- ++.|..|+. ..++... ........+..+... +..+.+++...+ .+.
T Consensus 173 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~-~i~ 249 (299)
T 2z2n_A 173 ITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEF-KIPTPNARPHAITAGAGIDLWFTEWGAN-KIG 249 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE-ECSSTTCCEEEEEECSTTCEEEEETTTT-EEE
T ss_pred EEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEE-ECCCCCCCceeEEECCCCCEEEeccCCc-eEE
Confidence 234444433 46787776 678999988 4443321 111122356777664 346889985532 255
Q ss_pred EEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 151 RYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 151 ~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
+|++ .+++..+.-......+.++.+ +++.+..++..+.+..+...
T Consensus 250 ~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~ 294 (299)
T 2z2n_A 250 RLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLI 294 (299)
T ss_dssp EEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC
T ss_pred EECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcC
Confidence 6676 467766643333456788888 77777777767777776543
No 131
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.36 E-value=1.7 Score=39.36 Aligned_cols=110 Identities=13% Similarity=0.026 Sum_probs=62.9
Q ss_pred cCCcceEEc-cc--cC-eEEEEe--CCEEEEEEcCCcceeeeee--ccCcCceEEEEEEeCCEEEEEeccccEEEEEEeC
Q psy17021 83 VDEVPYAMC-PF--QG-ALLVGV--GRYLRLYDLGKKKLLRKCE--NKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKR 154 (199)
Q Consensus 83 ~kG~v~aL~-~f--~g-~LLaav--g~~v~vy~l~~~~Ll~~~~--~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~ 154 (199)
-.++|+++. .+ +| .++|+. .++|++|++...+...... ........+.....+..++.|+-..+|.+...+.
T Consensus 307 H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 307 HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA 386 (524)
T ss_dssp SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC
T ss_pred ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc
Confidence 457788873 33 35 666544 6899999997654322111 1101112233333466888888888887765432
Q ss_pred CCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEe
Q psy17021 155 YENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVS 195 (199)
Q Consensus 155 ~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr 195 (199)
...+..+.. ...+|+++++= |...++.+-.++.+.+..
T Consensus 387 -~~~~~~l~g--H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 387 -AFAVHPLVS--RETTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp -TTCCEEEEE--CSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred -cccceeeec--CCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence 222223333 34578888875 334677777888776643
No 132
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.63 E-value=4.7 Score=32.73 Aligned_cols=104 Identities=8% Similarity=0.048 Sum_probs=60.0
Q ss_pred cCeEEEEe--CCEEEEEEcC-Ccceeeeeecc-CcCceEEEEEE--eCCEEEEEecc-ccEEEEEEeCCCCeEEEEecc-
Q psy17021 94 QGALLVGV--GRYLRLYDLG-KKKLLRKCENK-HLPNLIVKIES--MGHRIYVSDVQ-ESVFLVRYKRYENQLLIFADD- 165 (199)
Q Consensus 94 ~g~LLaav--g~~v~vy~l~-~~~Ll~~~~~~-~~~~~i~~l~~--~~~~IlVGD~~-~Sv~ll~y~~~~~~l~~varD- 165 (199)
+|+++++- +++|.+|++. ..++....... .....+..+.. .++++++.+.. ..+.++.++...+++..+..-
T Consensus 151 dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~ 230 (347)
T 3hfq_A 151 DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK 230 (347)
T ss_dssp TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE
T ss_pred CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee
Confidence 45665554 5689999997 44443332221 11223445554 46678886654 478888888766666544321
Q ss_pred CCc------eeEEEEEEEeCC-eEEEEc-CCCcEEEEeec
Q psy17021 166 TQP------RWITTSCVLDYN-TVASAD-KFGNVCIVSTY 197 (199)
Q Consensus 166 ~~~------~wvta~~~Ld~~-t~l~aD-~~gNl~vlr~~ 197 (199)
..+ .++.++.+-.+. .+++++ .++.+.++.++
T Consensus 231 ~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 231 TIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp SSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred ecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 111 467777776444 343444 46778888765
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=91.55 E-value=2.5 Score=33.60 Aligned_cols=42 Identities=17% Similarity=0.126 Sum_probs=25.8
Q ss_pred eeEEecCCC---cceeec--ccCCEEEEeec--CeeEEEecchhhhhhh
Q psy17021 3 FVHKTSVDE---VPYAMC--PFQGALLVGVG--RYLRLYDLGKKKLLRK 44 (199)
Q Consensus 3 ~~h~t~~~~---~~~~~~--~f~~~ll~~~~--~~l~~y~~g~k~ll~k 44 (199)
.++..+... .|..++ +-..++++... +.+.+||+...+.++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 71 (337)
T 1pby_B 23 VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGR 71 (337)
T ss_dssp EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEee
Confidence 455566665 465544 23336666654 5899999876666553
No 134
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=91.55 E-value=3.4 Score=34.87 Aligned_cols=58 Identities=9% Similarity=-0.020 Sum_probs=32.7
Q ss_pred EEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 137 RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 137 ~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
+++.|.--..|.+...++.........- ..+|+++.+=.+..+|++=.++.+.+.|+.
T Consensus 331 ~~~sgs~Dg~V~lwd~~~~~~~~~~~~~---~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 331 FATAHSQHGLIQLINTYEKDSNSIPIQL---GMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp EEEEETTTTEEEEEETTCTTCCEEEEEC---SSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred EEEEECCCCEEEEEECCCCcEEEEecCC---CCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 3444554556776655443333333332 237888888755554444456778887763
No 135
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=91.46 E-value=5 Score=32.79 Aligned_cols=114 Identities=11% Similarity=-0.018 Sum_probs=69.9
Q ss_pred cCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe----CCEEEEEeccccEEEEEEeCC
Q psy17021 83 VDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM----GHRIYVSDVQESVFLVRYKRY 155 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~----~~~IlVGD~~~Sv~ll~y~~~ 155 (199)
..++++++.-- +|.+|++. .++|++|+....+......+..-...+.++.-. +.+++.|..-..|.+......
T Consensus 152 h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 152 HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 44566665422 34444333 689999998654211112222112246666653 347888888889999887543
Q ss_pred CC------eEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021 156 EN------QLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVST 196 (199)
Q Consensus 156 ~~------~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~ 196 (199)
.. .....-.+....+++++.+-++..++.+..+|.+.++..
T Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 232 DEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEE 278 (330)
T ss_dssp CTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEE
T ss_pred CccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEc
Confidence 21 222222344667899999987778888889999988764
No 136
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=91.20 E-value=4.1 Score=35.70 Aligned_cols=58 Identities=10% Similarity=0.105 Sum_probs=34.9
Q ss_pred CeEEEE--eCCEEEEEEcCCcceeeeee-ccCcCceEEEEEEeCCEEEEEeccccEEEEEE
Q psy17021 95 GALLVG--VGRYLRLYDLGKKKLLRKCE-NKHLPNLIVKIESMGHRIYVSDVQESVFLVRY 152 (199)
Q Consensus 95 g~LLaa--vg~~v~vy~l~~~~Ll~~~~-~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y 152 (199)
|.++|+ -.++|++|++...+++.... ..+.....+.....+.+++.|..=+.|.+..+
T Consensus 295 g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 295 DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 334555 37899999998887655432 11111112334445678888887777777654
No 137
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=91.10 E-value=5.2 Score=32.30 Aligned_cols=111 Identities=9% Similarity=-0.032 Sum_probs=65.0
Q ss_pred CCcceEEccc-cCeEEEEeCCEEEEEEcCCcceeeeeecc-C-cCceEEEEEEe-CCEEEEEecc----------ccEEE
Q psy17021 84 DEVPYAMCPF-QGALLVGVGRYLRLYDLGKKKLLRKCENK-H-LPNLIVKIESM-GHRIYVSDVQ----------ESVFL 149 (199)
Q Consensus 84 kG~v~aL~~f-~g~LLaavg~~v~vy~l~~~~Ll~~~~~~-~-~~~~i~~l~~~-~~~IlVGD~~----------~Sv~l 149 (199)
.+.+.++..- +|+|+++.++.|..|++...++....... + ....+..+... +.++.+|++. .+-.+
T Consensus 53 ~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l 132 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGAL 132 (297)
T ss_dssp SSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEE
T ss_pred CCceEEEEECCCCCEEEEECCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEE
Confidence 4455555543 56788899999999999766554333221 1 12346677664 3468899864 34678
Q ss_pred EEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcC-CCcEEEEeec
Q psy17021 150 VRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADK-FGNVCIVSTY 197 (199)
Q Consensus 150 l~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~-~gNl~vlr~~ 197 (199)
++++++ +++..+..+.. +...+.+- |.++++++|. .+.|+++.++
T Consensus 133 ~~~d~~-g~~~~~~~~~~--~pngi~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 133 YSLFPD-HHVKKYFDQVD--ISNGLDWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp EEECTT-SCEEEEEEEES--BEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred EEEECC-CCEEEEeeccc--cccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence 899875 44544444332 33444443 3335556665 3456766653
No 138
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=90.96 E-value=5.9 Score=32.72 Aligned_cols=113 Identities=17% Similarity=0.184 Sum_probs=75.4
Q ss_pred eEEEeeccCCcce--EEccccCeEEEEeCC----EEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEE
Q psy17021 76 EFVHKTSVDEVPY--AMCPFQGALLVGVGR----YLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFL 149 (199)
Q Consensus 76 esVh~~~~kG~v~--aL~~f~g~LLaavg~----~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~l 149 (199)
+.+...+.+...+ .|.--.|.|..+-|. +|+.+++...++++..... ...+...+...++++.+.+-..+. +
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~-v 87 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHE-G 87 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE-E
T ss_pred EEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCE-E
Confidence 4444556665544 333224688888875 8999999988877766654 344577888889999999988776 6
Q ss_pred EEEeCCCCeE-EEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEE
Q psy17021 150 VRYKRYENQL-LIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194 (199)
Q Consensus 150 l~y~~~~~~l-~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vl 194 (199)
+.|+.+.-++ ..+.-.. .-|-.+ -|...+++||.++.|+++
T Consensus 88 ~v~D~~tl~~~~ti~~~~-~Gwglt---~dg~~L~vSdgs~~l~~i 129 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPG-EGWALT---SDDSHLYMSDGTAVIRKL 129 (243)
T ss_dssp EEEETTTTEEEEEEECSS-CCCEEE---ECSSCEEEECSSSEEEEE
T ss_pred EEEECCcCcEEEEEeCCC-CceEEe---eCCCEEEEECCCCeEEEE
Confidence 6778765433 3444333 335443 256788899987776654
No 139
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=90.95 E-value=7.7 Score=34.01 Aligned_cols=146 Identities=12% Similarity=0.133 Sum_probs=87.8
Q ss_pred ceeecccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEEcc
Q psy17021 13 PYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCP 92 (199)
Q Consensus 13 ~~~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL~~ 92 (199)
..|..+-.|.+.+|-++.+++|++ +-+||+.... +.- .+.....+..+ |+++.=
T Consensus 42 lLais~~~gll~a~~~~~l~v~~~---~~l~~~~~~~--~~~--------------------~~~~~~~~lp~-V~~l~f 95 (388)
T 1xip_A 42 NLDISNSKSLFVAASGSKAVVGEL---QLLRDHITSD--STP--------------------LTFKWEKEIPD-VIFVCF 95 (388)
T ss_dssp CEEEETTTTEEEEEETTEEEEEEH---HHHHHHHHSS--SCC--------------------CCCSEEEECTT-EEEEEE
T ss_pred EEEEcCCCCEEEEeCCCEEEEEEh---hHhhhhhccc--ccc--------------------ccceEEeeCCC-eeEEEE
Confidence 456778889999999999999987 3455544321 110 01111123445 666554
Q ss_pred ccC-eEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeE
Q psy17021 93 FQG-ALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWI 171 (199)
Q Consensus 93 f~g-~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wv 171 (199)
+| .|.++.+..|++|+..... ...........+.++.....-+++++.-.++.++..+ +++...++ -+|
T Consensus 96 -d~~~L~v~~~~~l~v~dv~sl~--~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~--~~~~~~~~-----~~V 165 (388)
T 1xip_A 96 -HGDQVLVSTRNALYSLDLEELS--EFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLR--TKSTKQLA-----QNV 165 (388)
T ss_dssp -ETTEEEEEESSEEEEEESSSTT--CEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETT--TCCEEEEE-----ESE
T ss_pred -CCCEEEEEcCCcEEEEEchhhh--ccCccceeecceeeEEecCCCEEEEECCCCEEEEEcc--CCcccccc-----CCc
Confidence 65 4567788999999986543 1111111223356777666557777777777777553 44444432 367
Q ss_pred EEEEEEeCCeEEEEcCCCcEEEEe
Q psy17021 172 TTSCVLDYNTVASADKFGNVCIVS 195 (199)
Q Consensus 172 ta~~~Ld~~t~l~aD~~gNl~vlr 195 (199)
+|++.=... ...+-.+|++.++.
T Consensus 166 s~v~WSpkG-~~vg~~dg~i~~~~ 188 (388)
T 1xip_A 166 TSFDVTNSQ-LAVLLKDRSFQSFA 188 (388)
T ss_dssp EEEEECSSE-EEEEETTSCEEEEE
T ss_pred eEEEEcCCc-eEEEEcCCcEEEEc
Confidence 777775555 56667788888773
No 140
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=90.44 E-value=6.3 Score=32.17 Aligned_cols=113 Identities=10% Similarity=-0.024 Sum_probs=63.4
Q ss_pred cCCcceEEc--ccc-CeEEE--EeCCEEEEEEcCCcc------eeeeeeccC-cCceEEEEEE-eCCEEEEEeccccEEE
Q psy17021 83 VDEVPYAMC--PFQ-GALLV--GVGRYLRLYDLGKKK------LLRKCENKH-LPNLIVKIES-MGHRIYVSDVQESVFL 149 (199)
Q Consensus 83 ~kG~v~aL~--~f~-g~LLa--avg~~v~vy~l~~~~------Ll~~~~~~~-~~~~i~~l~~-~~~~IlVGD~~~Sv~l 149 (199)
..+.|+++. |-. +..|+ +-.++|++|++.... ......... ....+.++.- .+.+++.|..-..|.+
T Consensus 196 h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~i 275 (330)
T 2hes_X 196 HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAV 275 (330)
T ss_dssp CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEE
T ss_pred CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEE
Confidence 455676654 321 33343 336899999985321 111112211 1123555554 3567888888888888
Q ss_pred EEEeCCCCeEEEEe---ccCCceeEEEEEEEe---CCeEEEEcCCCcEEEEeec
Q psy17021 150 VRYKRYENQLLIFA---DDTQPRWITTSCVLD---YNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 150 l~y~~~~~~l~~va---rD~~~~wvta~~~Ld---~~t~l~aD~~gNl~vlr~~ 197 (199)
.... .+....+. ..+...+++++.+.. ...++.+..+|.+.+..+.
T Consensus 276 w~~~--~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 276 YEEV--DGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEE--TTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEcC--CCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 7654 33322222 233333788888874 3467778899999988764
No 141
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=90.38 E-value=7.8 Score=33.12 Aligned_cols=88 Identities=15% Similarity=0.042 Sum_probs=51.1
Q ss_pred CEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEE-EEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeC
Q psy17021 103 RYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIY-VSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY 179 (199)
Q Consensus 103 ~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~Il-VGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~ 179 (199)
..|++|++...+........ ..+.++.- .+.+++ .+.--....+..|+...++...+..+ +.+++++.+-.+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~---~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spd 277 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP---RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG--RSNNTEPTWFPD 277 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS---SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCC--SSCEEEEEECTT
T ss_pred cEEEEEECCCCcEEEeecCC---CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCC--CCcccceEECCC
Confidence 48999999766554433332 23444443 466676 45444455677778777776665543 356778877644
Q ss_pred C-eEE-EEcCCC--cEEEEe
Q psy17021 180 N-TVA-SADKFG--NVCIVS 195 (199)
Q Consensus 180 ~-t~l-~aD~~g--Nl~vlr 195 (199)
+ .++ +++..+ .|+++.
T Consensus 278 g~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 278 SQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEE
T ss_pred CCEEEEEECCCCCcEEEEEE
Confidence 4 333 455455 455544
No 142
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.73 E-value=8.1 Score=32.33 Aligned_cols=159 Identities=17% Similarity=0.124 Sum_probs=99.2
Q ss_pred eeEEecCCCcc--eeecccCCEEEEeecC----eeEEEecchhhhhhhhhhcccccCce------eeeeEEEEEcCceeE
Q psy17021 3 FVHKTSVDEVP--YAMCPFQGALLVGVGR----YLRLYDLGKKKLLRKCENKVRIKGFR------KAHQTHTHSGRSDRL 70 (199)
Q Consensus 3 ~~h~t~~~~~~--~~~~~f~~~ll~~~~~----~l~~y~~g~k~ll~k~~~~~~~~~~~------~~~~~~~~~~~~ri~ 70 (199)
.+.+-+.+..| ..|.--.|+|.++.|. .|+.+|+-..+.+++-... -..|. ..-+...+|.+++++
T Consensus 33 vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~--~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELG--KRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECC--TTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecC--CccceeEEEEeCCEEEEEEeeCCEEE
Confidence 34445555555 3343337899999996 7999999888887754322 00111 123344456556664
Q ss_pred E--CCeeeEEEeeccCCcceEEccccCeEEEEeC-CEEEEEEcCCcceeeeeecc--CcC-ceEEEEEEeCCEEEEEecc
Q psy17021 71 V--GNAMEFVHKTSVDEVPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENK--HLP-NLIVKIESMGHRIYVSDVQ 144 (199)
Q Consensus 71 v--gdklesVh~~~~kG~v~aL~~f~g~LLaavg-~~v~vy~l~~~~Ll~~~~~~--~~~-~~i~~l~~~~~~IlVGD~~ 144 (199)
+ -+.++.+-..++.+...++++-.++|.++-| ++|.+++-..-+.++..... +.+ ..+..+...+.+|.+..-+
T Consensus 111 v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~ 190 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQ 190 (262)
T ss_dssp EEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETT
T ss_pred EEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEcc
Confidence 3 3457778888888877788866667777663 56888887665554443321 111 3355677678899988866
Q ss_pred ccEEEEEEeCCCCeEEEEec
Q psy17021 145 ESVFLVRYKRYENQLLIFAD 164 (199)
Q Consensus 145 ~Sv~ll~y~~~~~~l~~var 164 (199)
.. .+.+.+++.++....-+
T Consensus 191 ~~-~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 191 TN-KIVRIDPETGKVTGIID 209 (262)
T ss_dssp SS-EEEEECTTTCBEEEEEE
T ss_pred CC-eEEEEECCCCcEEEEEE
Confidence 54 57788888877655443
No 143
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.39 E-value=8.8 Score=32.28 Aligned_cols=154 Identities=15% Similarity=0.133 Sum_probs=98.7
Q ss_pred eEEecCCCcc--eeecccCCEEEEeecC--eeEEEecchhhhhhhhhhcccccCce------eeeeEEEEEcCceeEE--
Q psy17021 4 VHKTSVDEVP--YAMCPFQGALLVGVGR--YLRLYDLGKKKLLRKCENKVRIKGFR------KAHQTHTHSGRSDRLV-- 71 (199)
Q Consensus 4 ~h~t~~~~~~--~~~~~f~~~ll~~~~~--~l~~y~~g~k~ll~k~~~~~~~~~~~------~~~~~~~~~~~~ri~v-- 71 (199)
+.+-+.+..| ..|.--.++|.++.|. .|+.+|+-..|.+++- .. -..|. ...+...+|.++++++
T Consensus 46 v~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~--~~~FgeGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 46 IREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RL--GNIFAEGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-EC--TTCCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred EEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CC--CCcceeEEEEeCCEEEEEEccCCEEEEEE
Confidence 3444455545 3444447899999996 6999999888887765 21 01111 1233445666666644
Q ss_pred CCeeeEEEeeccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccC--cC-ceEEEEEEeCCEEEEEeccccE
Q psy17021 72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKH--LP-NLIVKIESMGHRIYVSDVQESV 147 (199)
Q Consensus 72 gdklesVh~~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~--~~-~~i~~l~~~~~~IlVGD~~~Sv 147 (199)
.+.++.+-..++.+...++++-.++|.++- .++|.+++-..-+.++...... .+ ..+..|...+.+|.++.-...
T Consensus 123 ~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~- 201 (268)
T 3nok_A 123 GMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSS- 201 (268)
T ss_dssp TTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCS-
T ss_pred CCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCC-
Confidence 346788888888888888887667787776 4778888876655544333211 11 245667777889998886554
Q ss_pred EEEEEeCCCCeEEE
Q psy17021 148 FLVRYKRYENQLLI 161 (199)
Q Consensus 148 ~ll~y~~~~~~l~~ 161 (199)
.+.+.+++.++...
T Consensus 202 ~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 202 DVLEIDPATGTVVG 215 (268)
T ss_dssp EEEEECTTTCBEEE
T ss_pred eEEEEeCCCCcEEE
Confidence 57777887775543
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=89.26 E-value=7.3 Score=31.15 Aligned_cols=119 Identities=10% Similarity=0.084 Sum_probs=68.9
Q ss_pred eEEEeeccCCcceEEc--cccCeEEEEeC--CEEEEEEcCCcceeeeeeccC-------cCceEEEEEE--eCCEEEEEe
Q psy17021 76 EFVHKTSVDEVPYAMC--PFQGALLVGVG--RYLRLYDLGKKKLLRKCENKH-------LPNLIVKIES--MGHRIYVSD 142 (199)
Q Consensus 76 esVh~~~~kG~v~aL~--~f~g~LLaavg--~~v~vy~l~~~~Ll~~~~~~~-------~~~~i~~l~~--~~~~IlVGD 142 (199)
+.+......+.+.++. +=.++++++-. +.|.+|+....+.+....... .+..+..+.. .++++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 159 (353)
T 3vgz_A 80 EVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISG 159 (353)
T ss_dssp CEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEE
T ss_pred eEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEe
Confidence 3344444444444433 32234666654 799999998766555433321 1122555554 578999999
Q ss_pred ccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEe
Q psy17021 143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVS 195 (199)
Q Consensus 143 ~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr 195 (199)
....-.+..|+....+....-.. ...++.++.+- |.+.+++++.+++++++.
T Consensus 160 ~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d 212 (353)
T 3vgz_A 160 IGKESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNADGELITID 212 (353)
T ss_dssp ESSSCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECTTSEEEEEE
T ss_pred cCCCceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEcCCCeEEEEE
Confidence 76555677788777766544331 12233444444 445688888888887764
No 145
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=88.98 E-value=8.2 Score=31.40 Aligned_cols=96 Identities=17% Similarity=0.125 Sum_probs=55.4
Q ss_pred eEEEEe--CCEEEEEEcCCcce---eeeeeccCcCceEEEEEEe-CCEEEEEeccc---------cEEEEEEeCCCCeEE
Q psy17021 96 ALLVGV--GRYLRLYDLGKKKL---LRKCENKHLPNLIVKIESM-GHRIYVSDVQE---------SVFLVRYKRYENQLL 160 (199)
Q Consensus 96 ~LLaav--g~~v~vy~l~~~~L---l~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~---------Sv~ll~y~~~~~~l~ 160 (199)
.|.++- +++|..|++....+ ..... .+. +..+... +..+.|++... +-.+.+|+++...+.
T Consensus 198 ~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~ 273 (322)
T 2fp8_A 198 FVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILE 273 (322)
T ss_dssp EEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEE
T ss_pred EEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEE
Confidence 366653 47899999864321 11111 122 5555553 23578888762 456889998766555
Q ss_pred EEeccCC--ceeEEEEEEEeCCeEEEEcCCCc-EEEEee
Q psy17021 161 IFADDTQ--PRWITTSCVLDYNTVASADKFGN-VCIVST 196 (199)
Q Consensus 161 ~varD~~--~~wvta~~~Ld~~t~l~aD~~gN-l~vlr~ 196 (199)
.+..... ..+++++.+ +++++.+++...| |..+++
T Consensus 274 ~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 274 VIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp EEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred EEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 5543221 457777765 6777777776554 555544
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=88.74 E-value=7.8 Score=30.82 Aligned_cols=60 Identities=17% Similarity=0.264 Sum_probs=34.6
Q ss_pred cCe-EEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCC
Q psy17021 94 QGA-LLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 94 ~g~-LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
+|+ ++++ .++|.+|++...++++...... ...-..+...+++++++..-.++.++ +.+..
T Consensus 266 dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~v~v~--d~~~~ 326 (349)
T 1jmx_B 266 DPNQIYGV-LNRLAKYDLKQRKLIKAANLDH-TYYCVAFDKKGDKLYLGGTFNDLAVF--NPDTL 326 (349)
T ss_dssp CTTEEEEE-ESEEEEEETTTTEEEEEEECSS-CCCEEEECSSSSCEEEESBSSEEEEE--ETTTT
T ss_pred CCCEEEEE-cCeEEEEECccCeEEEEEcCCC-CccceEECCCCCEEEEecCCCeEEEE--ecccc
Confidence 454 4455 8899999998777655443321 12233333346778887655555554 44443
No 147
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=87.94 E-value=7.7 Score=31.75 Aligned_cols=90 Identities=16% Similarity=0.117 Sum_probs=53.9
Q ss_pred CEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEEEEeCCCC--eEEEEec-------cCCceeEE
Q psy17021 103 RYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLVRYKRYEN--QLLIFAD-------DTQPRWIT 172 (199)
Q Consensus 103 ~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll~y~~~~~--~l~~var-------D~~~~wvt 172 (199)
++|.+|+....++++..... ....+..+... +..++|.|.... .+.+|+++.. .+..++. +..-.+..
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~-~~~~p~gia~d~~g~l~v~d~~~~-~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~ 146 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKN-LFYLPHGLSIDTDGNYWVTDVALH-QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp CCEEEECTTTCCEEEEECTT-TCSSEEEEEECTTSCEEEEETTTT-EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE
T ss_pred CcEEEEECCCCeEEeccCCC-ccCCceEEEECCCCCEEEEECCCC-EEEEEeCCCCeEEEEEecccCCCCCCccccCCCc
Confidence 46788887655654432211 22346666654 334889998765 3677887655 4566654 33344677
Q ss_pred EEEEEe-CCeEEEEcC--CCcEEEE
Q psy17021 173 TSCVLD-YNTVASADK--FGNVCIV 194 (199)
Q Consensus 173 a~~~Ld-~~t~l~aD~--~gNl~vl 194 (199)
++.+-. ++.++++|. .+.|.++
T Consensus 147 ~ia~~~~~g~lyv~d~~~~~~I~~~ 171 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYCNSRIVQF 171 (329)
T ss_dssp EEEECTTTCCEEEEECSSCCEEEEE
T ss_pred EEEEeCCCCeEEEEeCCCCCeEEEE
Confidence 777754 668888895 3444444
No 148
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=87.66 E-value=9.7 Score=30.64 Aligned_cols=173 Identities=9% Similarity=0.045 Sum_probs=89.6
Q ss_pred cCCCcceeeccc-CCEEEEeecCeeEEEecchhhh--hhhhhhcccccCceeeeeEEEEEcCceeEECCee---------
Q psy17021 8 SVDEVPYAMCPF-QGALLVGVGRYLRLYDLGKKKL--LRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAM--------- 75 (199)
Q Consensus 8 ~~~~~~~~~~~f-~~~ll~~~~~~l~~y~~g~k~l--l~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdkl--------- 75 (199)
.....|.+++.- +|+|+++.++.|..||....++ +...+.. .|. ..+-......++|+++++.-
T Consensus 51 ~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~~~~--~~~--~~~~di~~d~dG~l~~~~~~~~~~~~~~~ 126 (297)
T 3g4e_A 51 TMDAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLATVDND--KKN--NRFNDGKVDPAGRYFAGTMAEETAPAVLE 126 (297)
T ss_dssp ECSSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEEEECCTT--CSS--EEEEEEEECTTSCEEEEEEECCSBTTBCC
T ss_pred eCCCceEEEEECCCCCEEEEECCeEEEEECCCCcEEEEEecCCC--CCC--CCCCCEEECCCCCEEEecCCccccccccc
Confidence 345667766543 6889999999999999854333 2111111 010 11222333345678776521
Q ss_pred ---eEEEeeccCCcc----------eEEccc-cCe-EEEEe--CCEEEEEEcC--Ccceee-eee--ccCcCceEEEEEE
Q psy17021 76 ---EFVHKTSVDEVP----------YAMCPF-QGA-LLVGV--GRYLRLYDLG--KKKLLR-KCE--NKHLPNLIVKIES 133 (199)
Q Consensus 76 ---esVh~~~~kG~v----------~aL~~f-~g~-LLaav--g~~v~vy~l~--~~~Ll~-~~~--~~~~~~~i~~l~~ 133 (199)
..++...-+|.+ +.++-- .|+ |.++- +++|..|++. ..++.. ... .......+..+..
T Consensus 127 ~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~ 206 (297)
T 3g4e_A 127 RHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCI 206 (297)
T ss_dssp TTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEE
T ss_pred CCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEE
Confidence 234444334432 222211 243 54443 5788899883 333321 111 1111234666665
Q ss_pred e-CCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE--eCCeEEEEc
Q psy17021 134 M-GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL--DYNTVASAD 186 (199)
Q Consensus 134 ~-~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L--d~~t~l~aD 186 (199)
. +..+.|++...+ .+.+|+++.+++...-.- ...+++++.|- |.+++.++.
T Consensus 207 d~~G~lwva~~~~~-~v~~~d~~tG~~~~~i~~-p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 207 DAEGKLWVACYNGG-RVIRLDPVTGKRLQTVKL-PVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp BTTSCEEEEEETTT-EEEEECTTTCCEEEEEEC-SSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCCEEEEEcCCC-EEEEEcCCCceEEEEEEC-CCCCceEEEEeCCCCCEEEEEc
Confidence 3 346788886655 378899875554333222 23578999986 334554444
No 149
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=87.38 E-value=18 Score=33.55 Aligned_cols=170 Identities=14% Similarity=0.061 Sum_probs=92.4
Q ss_pred Ccceeec-ccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEee--------
Q psy17021 11 EVPYAMC-PFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKT-------- 81 (199)
Q Consensus 11 ~~~~~~~-~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~-------- 81 (199)
..+.++. .=+|+|.+|..+.|..||.-..+..+-..... .+..+ +..+....++++.++-. ..+...
T Consensus 88 n~I~~i~~d~~g~lWigT~~Gl~~yd~~~~~f~~~~~~~~-~~~~~--i~~i~~d~~g~lwi~t~-~gl~~~~~~~~~~~ 163 (795)
T 4a2l_A 88 DISRIVKTDSQGRVWIGTRDGLSRYDEEKDIFQNFFYEKN-GKHLQ--VNGIEEISPEQLLISTP-EGLIMFDIKESKFI 163 (795)
T ss_dssp SCEEEEEECTTSCEEEEESSCEEEEETTTTEEEEECCEET-TEECC--CCEEEEEETTEEEEEET-TEEEEEETTTTEEE
T ss_pred cceeEEEECCCCCEEEEeCCchheeCCCCCeEEecccccc-CCCce--EEEEEECCCCCEEEEEC-CceEEEECCCCEEE
Confidence 3455665 44689999999999999975443321000000 00110 33444445567766532 112211
Q ss_pred ccCC-----c-ceEEccc-cCeEEEEeC-CEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEEEE
Q psy17021 82 SVDE-----V-PYAMCPF-QGALLVGVG-RYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLVRY 152 (199)
Q Consensus 82 ~~kG-----~-v~aL~~f-~g~LLaavg-~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll~y 152 (199)
.+.. . +.++..- +|.|.+|.. +.|..|+...+++....... ....+.++.. .++.+.+|....+ +++|
T Consensus 164 ~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~-~~~~i~~i~~d~~g~lwigt~~~G--l~~~ 240 (795)
T 4a2l_A 164 DDSFSTAMHKTIASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPIL-GTKQIQAILQQSPTRIWVATEGAG--LFLI 240 (795)
T ss_dssp CSSSCHHHHTCCEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC-----CCCEEEEEEEETTEEEEEEBSSC--EEEE
T ss_pred eccCCCCCCcceEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCC-CCCeeEEEEEcCCCCEEEEECCCC--eEEE
Confidence 1111 1 5565543 678888885 57888988766543321111 1234666654 4677889886666 5667
Q ss_pred eCCCCeEEEEeccC------CceeEEEEEEEeCC-eEEEEcC
Q psy17021 153 KRYENQLLIFADDT------QPRWITTSCVLDYN-TVASADK 187 (199)
Q Consensus 153 ~~~~~~l~~varD~------~~~wvta~~~Ld~~-t~l~aD~ 187 (199)
++..+++..+..+. ....+.++..-.++ -++|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~ 282 (795)
T 4a2l_A 241 NPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN 282 (795)
T ss_dssp ETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS
T ss_pred eCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC
Confidence 87777777665432 23456665443222 4666654
No 150
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=87.32 E-value=13 Score=31.72 Aligned_cols=106 Identities=9% Similarity=0.011 Sum_probs=58.6
Q ss_pred CCcceEEccc-cCe-EEEEeCC----EEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccc-cEEEEEEeC
Q psy17021 84 DEVPYAMCPF-QGA-LLVGVGR----YLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQE-SVFLVRYKR 154 (199)
Q Consensus 84 kG~v~aL~~f-~g~-LLaavg~----~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~-Sv~ll~y~~ 154 (199)
.+.+.++.-- +|+ |+.+.+. +|.+|++...+..+.... ..++.++. ..+++|+++.... ...+..|+.
T Consensus 266 ~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~---~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 266 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE---GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS---SSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC---CCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 3445544322 355 5555432 688888876554332221 23444444 3577888776543 356777887
Q ss_pred CCCeEEEEeccCCceeEEEEEEEeC-CeEEEEcCCC---cEEEEe
Q psy17021 155 YENQLLIFADDTQPRWITTSCVLDY-NTVASADKFG---NVCIVS 195 (199)
Q Consensus 155 ~~~~l~~varD~~~~wvta~~~Ld~-~t~l~aD~~g---Nl~vlr 195 (199)
+.++...+.... ++.++.+-.+ ..++.+..++ .|+++.
T Consensus 343 ~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 343 ATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp TTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCCccEEEEEE
Confidence 777776666543 6777777633 4444443333 455553
No 151
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=86.71 E-value=12 Score=30.80 Aligned_cols=140 Identities=14% Similarity=0.157 Sum_probs=94.0
Q ss_pred CCEEEEeecC----eeEEEecchhhhhhhhhhcccccCce------eeeeEEEEEcCceeEE--CCeeeEEEeeccCCcc
Q psy17021 20 QGALLVGVGR----YLRLYDLGKKKLLRKCENKVRIKGFR------KAHQTHTHSGRSDRLV--GNAMEFVHKTSVDEVP 87 (199)
Q Consensus 20 ~~~ll~~~~~----~l~~y~~g~k~ll~k~~~~~~~~~~~------~~~~~~~~~~~~ri~v--gdklesVh~~~~kG~v 87 (199)
.++|.++.|. .|+.+|+-..+++++-.... ..|- ...+...+|.++++++ .+.++.+-..++.+..
T Consensus 30 ~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G 107 (243)
T 3mbr_X 30 RGHLYESTGETGRSSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG 107 (243)
T ss_dssp TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC
T ss_pred CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc
Confidence 5899999996 79999998888877543220 0111 1233445666666644 4468888888899988
Q ss_pred eEEccccCeEEEEeC-CEEEEEEcCCcceeeeeeccC--cC-ceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEE
Q psy17021 88 YAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKH--LP-NLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIF 162 (199)
Q Consensus 88 ~aL~~f~g~LLaavg-~~v~vy~l~~~~Ll~~~~~~~--~~-~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~v 162 (199)
.++++-.++|.++=| ++|.+++-..-+.++.....+ .+ ..+..|...+.+|++..-+.. .+.+.++..++....
T Consensus 108 wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~-~I~vIDp~tG~V~~~ 185 (243)
T 3mbr_X 108 WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTS-RIARIDPASGKVVAW 185 (243)
T ss_dssp CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTT-EEEEECTTTCBEEEE
T ss_pred eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCC-eEEEEECCCCCEEEE
Confidence 999977778887764 678778776655544433321 11 246677778889998886544 677778887765443
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=86.57 E-value=11 Score=30.33 Aligned_cols=86 Identities=12% Similarity=0.059 Sum_probs=52.2
Q ss_pred cCe-EEEEe--CCEEEEEEcCCc-ceeeeeeccCcCceEEEEE--EeCCEEEEEecc-ccEEEEEEeCCCCeEEEEeccC
Q psy17021 94 QGA-LLVGV--GRYLRLYDLGKK-KLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQ-ESVFLVRYKRYENQLLIFADDT 166 (199)
Q Consensus 94 ~g~-LLaav--g~~v~vy~l~~~-~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~-~Sv~ll~y~~~~~~l~~varD~ 166 (199)
+|+ |.++- +++|.+|++... ++............+..+. ..+.++++++.. .++.+++.+.+.+++..+....
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~~~ 329 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQKDV 329 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecccce
Confidence 354 54443 588999999633 3322222221112233443 457789999876 6899999998889998888654
Q ss_pred CceeEEEEEEEeC
Q psy17021 167 QPRWITTSCVLDY 179 (199)
Q Consensus 167 ~~~wvta~~~Ld~ 179 (199)
.----.++.+|.+
T Consensus 330 ~~p~p~~~~~~~~ 342 (347)
T 3hfq_A 330 TVPEGVCVRFLEH 342 (347)
T ss_dssp ECTTEEEEEECC-
T ss_pred ecCCCcEEEehhh
Confidence 4444455555543
No 153
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=86.50 E-value=13 Score=31.01 Aligned_cols=113 Identities=16% Similarity=0.090 Sum_probs=71.8
Q ss_pred eeEEEeeccCCcc--eEEccccCeEEEEeCC----EEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEE
Q psy17021 75 MEFVHKTSVDEVP--YAMCPFQGALLVGVGR----YLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVF 148 (199)
Q Consensus 75 lesVh~~~~kG~v--~aL~~f~g~LLaavg~----~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ 148 (199)
.+.+...+.+... ..|.--+|.|..+-|. +|+.+++...++++..... ...+...+...++++.+.+-..+.
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~- 108 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGL- 108 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE-
T ss_pred eEEEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCE-
Confidence 4555556666655 2233225678888764 8999999988877766554 344577888889999999988776
Q ss_pred EEEEeCCCC-eEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEE
Q psy17021 149 LVRYKRYEN-QLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193 (199)
Q Consensus 149 ll~y~~~~~-~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~v 193 (199)
++.|+.+.. .+..+.-.. .-|-.+ =|.+.++.+|....|++
T Consensus 109 v~v~D~~t~~~~~ti~~~~-eG~glt---~dg~~L~~SdGs~~i~~ 150 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDG-EGWGLT---HNDQYLIMSDGTPVLRF 150 (262)
T ss_dssp EEEEETTTCCEEEEEECSS-CCCCEE---ECSSCEEECCSSSEEEE
T ss_pred EEEEECccCcEEEEEECCC-CceEEe---cCCCEEEEECCCCeEEE
Confidence 667787653 334444332 224333 14556777776554443
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=85.78 E-value=10 Score=28.95 Aligned_cols=97 Identities=11% Similarity=-0.090 Sum_probs=56.1
Q ss_pred eEEEEeCCEEEEEEcCC-cceeeeeeccCcCceE--EEEEEeCCEEEEEecc--ccEEEEEEeCCCCeEEEEeccCCcee
Q psy17021 96 ALLVGVGRYLRLYDLGK-KKLLRKCENKHLPNLI--VKIESMGHRIYVSDVQ--ESVFLVRYKRYENQLLIFADDTQPRW 170 (199)
Q Consensus 96 ~LLaavg~~v~vy~l~~-~~Ll~~~~~~~~~~~i--~~l~~~~~~IlVGD~~--~Sv~ll~y~~~~~~l~~varD~~~~w 170 (199)
+|+++-..+|++|++.. .+........ ....+ ......+.+++++.-. ....+..++...++...+.....
T Consensus 55 ~l~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--- 130 (297)
T 2ojh_A 55 YLLLNSEGLLYRLSLAGDPSPEKVDTGF-ATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP--- 130 (297)
T ss_dssp EEEEEETTEEEEEESSSCCSCEECCCTT-CCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS---
T ss_pred EEEEEcCCeEEEEeCCCCCCceEecccc-ccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC---
Confidence 56667788999999977 5543322111 11223 2333456788887733 46777888766666666655443
Q ss_pred EEEEEEE-eCCeEE-EEcCCCcEEEEee
Q psy17021 171 ITTSCVL-DYNTVA-SADKFGNVCIVST 196 (199)
Q Consensus 171 vta~~~L-d~~t~l-~aD~~gNl~vlr~ 196 (199)
+.++.+- |...++ .+..++.+.++.+
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~~~l~~~ 158 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQVFDIYSM 158 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred ccceEECCCCCEEEEEECCCCceEEEEE
Confidence 5555555 333444 5666675555554
No 155
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=85.34 E-value=11 Score=29.17 Aligned_cols=167 Identities=11% Similarity=0.012 Sum_probs=82.7
Q ss_pred Ccceeeccc-CCEEEEee--cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-eeEEEeeccC--
Q psy17021 11 EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-MEFVHKTSVD-- 84 (199)
Q Consensus 11 ~~~~~~~~f-~~~ll~~~--~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-lesVh~~~~k-- 84 (199)
..|.+++.- .|++.++. ++.+..||.. .++.+.. .|........+....++++++++. -..+.....+
T Consensus 104 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-----~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~ 177 (300)
T 2qc5_A 104 SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD-----LPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGK 177 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE-----CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCC
T ss_pred CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc-----CCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCc
Confidence 457776644 68888876 4678888865 3322111 111001111222223345655331 1111111111
Q ss_pred ----------CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEE
Q psy17021 85 ----------EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLV 150 (199)
Q Consensus 85 ----------G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll 150 (199)
..+.+++.- +|.|.++- ++.|..|+.. .++.... .......+..+... ++.+.++|...+ .+.
T Consensus 178 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~-~i~ 254 (300)
T 2qc5_A 178 LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GEISEYD-IPTPNARPHAITAGKNSEIWFTEWGAN-QIG 254 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTTT-EEE
T ss_pred EEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC-CcEEEEE-CCCCCCCceEEEECCCCCEEEeccCCC-eEE
Confidence 234444432 56787776 4678888873 3332221 11112346677664 346889996532 356
Q ss_pred EEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcC
Q psy17021 151 RYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187 (199)
Q Consensus 151 ~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~ 187 (199)
+|++ .+++..+.-.....++.++..-.++.+..++.
T Consensus 255 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 255 RITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp EECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS
T ss_pred EECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc
Confidence 6777 45565554332234455665543456666666
No 156
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=85.30 E-value=11 Score=29.02 Aligned_cols=173 Identities=14% Similarity=0.038 Sum_probs=78.6
Q ss_pred cceeecc-cCCEEEE-e--ecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccC---
Q psy17021 12 VPYAMCP-FQGALLV-G--VGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVD--- 84 (199)
Q Consensus 12 ~~~~~~~-f~~~ll~-~--~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~k--- 84 (199)
.|.+++. =.|+|.+ + -++.|..||.+.++.-....... ..+. .+....++++++++.-..+.....+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~p~---~i~~~~~g~l~v~~~~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL---YQPQ---GLAVDGAGTVYVTDFNNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSC---CSCC---CEEECTTCCEEEEETTTEEEEECTTCSC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCc---CCcc---eeEECCCCCEEEEcCCCEEEEEeCCCce
Confidence 6666654 3578888 5 34789999987654321111110 1121 2222223456554321122222211
Q ss_pred ---------CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEEE
Q psy17021 85 ---------EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLVR 151 (199)
Q Consensus 85 ---------G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll~ 151 (199)
..+.++.-- +|++.++- ++.|..|+.+....... ... ....+..+... ++.++++|...+ .+.+
T Consensus 99 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~-~~~-~~~~p~~i~~~~~g~l~v~~~~~~-~i~~ 175 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL-PFT-GLNDPDGVAVDNSGNVYVTDTDNN-RVVK 175 (270)
T ss_dssp CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC-CCC-SCCSCCCEEECTTCCEEEEEGGGT-EEEE
T ss_pred EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee-ccc-cCCCceeEEEeCCCCEEEEECCCC-EEEE
Confidence 234444322 56777764 46788886654332111 111 11234445443 345888887653 3566
Q ss_pred EeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcC-CCcEEEE
Q psy17021 152 YKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK-FGNVCIV 194 (199)
Q Consensus 152 y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~-~gNl~vl 194 (199)
|+............ ......++.+=.++.+.++|. .+.|..+
T Consensus 176 ~~~~~~~~~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~ 218 (270)
T 1rwi_B 176 LEAESNNQVVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKL 218 (270)
T ss_dssp ECTTTCCEEECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEE
T ss_pred EecCCCceEeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEE
Confidence 77665544332211 113455554422235555554 3345544
No 157
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=85.28 E-value=11 Score=36.04 Aligned_cols=109 Identities=15% Similarity=0.156 Sum_probs=68.6
Q ss_pred ccCCcceEEccc-cCeEEE-Ee-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEEEEeCCCC
Q psy17021 82 SVDEVPYAMCPF-QGALLV-GV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 82 ~~kG~v~aL~~f-~g~LLa-av-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
..++.|++++-= .|++|| |- ..+|++|+....+....... ...|.++.- .+.+++.|+.-.+|.+...+. ..
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~---~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~-~~ 90 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLED---RSAIKEMRFVKGIYLVVINAKDTVYVLSLYS-QK 90 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSS---CCCEEEEEEETTTEEEEEETTCEEEEEETTT-CS
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCC---CCCEEEEEEcCCCEEEEEECcCeEEEEECCC-Cc
Confidence 345666665422 244443 33 57999999876554332211 234666653 367899999888888776532 23
Q ss_pred eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
.+..+. .+.+++++.+- |.+.++.++.+|++.++.++
T Consensus 91 ~~~~~~---~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~ 128 (902)
T 2oaj_A 91 VLTTVF---VPGKITSIDTDASLDWMLIGLQNGSMIVYDID 128 (902)
T ss_dssp EEEEEE---CSSCEEEEECCTTCSEEEEEETTSCEEEEETT
T ss_pred EEEEEc---CCCCEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 333332 34578998887 44578889999999988653
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=84.91 E-value=13 Score=29.32 Aligned_cols=86 Identities=15% Similarity=0.104 Sum_probs=48.1
Q ss_pred EEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCC
Q psy17021 104 YLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYN 180 (199)
Q Consensus 104 ~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~ 180 (199)
.|.+|++...++... ........+.++.. .+.+++++| . .+..|+...++....-.. ..++.++.+- |.+
T Consensus 220 ~v~~~d~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~~~~--~--~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~ 292 (337)
T 1pby_B 220 GLLTMDLETGEMAMR-EVRIMDVFYFSTAVNPAKTRAFGAY--N--VLESFDLEKNASIKRVPL--PHSYYSVNVSTDGS 292 (337)
T ss_dssp EEEEEETTTCCEEEE-EEEECSSCEEEEEECTTSSEEEEEE--S--EEEEEETTTTEEEEEEEC--SSCCCEEEECTTSC
T ss_pred ceEEEeCCCCCceEe-ecCCCCCceeeEEECCCCCEEEEeC--C--eEEEEECCCCcCcceecC--CCceeeEEECCCCC
Confidence 578888877665422 22112223444444 467888884 3 455667666655433221 2234555655 344
Q ss_pred eEEEEcCCCcEEEEee
Q psy17021 181 TVASADKFGNVCIVST 196 (199)
Q Consensus 181 t~l~aD~~gNl~vlr~ 196 (199)
.++++..++++.++..
T Consensus 293 ~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 293 TVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEEEESBSSEEEEEET
T ss_pred EEEEEcCCCcEEEEEC
Confidence 5666777788888754
No 159
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=83.53 E-value=17 Score=29.72 Aligned_cols=114 Identities=11% Similarity=-0.007 Sum_probs=69.4
Q ss_pred CCcceEEccc-cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC-
Q psy17021 84 DEVPYAMCPF-QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN- 157 (199)
Q Consensus 84 kG~v~aL~~f-~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~- 157 (199)
.+.++++.-- +|. |++| -.+++++|+....+.........-...|.++.- .+++++.|..-..|.+.+.....+
T Consensus 150 ~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~ 229 (345)
T 3fm0_A 150 TQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE 229 (345)
T ss_dssp CSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCT
T ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCC
Confidence 4456655432 244 4433 368899999976653332333322234666665 477999999999999987532211
Q ss_pred ------------eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021 158 ------------QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 158 ------------~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~ 197 (199)
+.......+....++++.+- +...++.+..++.+.++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~ 282 (345)
T 3fm0_A 230 QGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQED 282 (345)
T ss_dssp TCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEEC
T ss_pred ccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeC
Confidence 11222234456778888886 34467888888888887653
No 160
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=83.52 E-value=14 Score=28.67 Aligned_cols=175 Identities=11% Similarity=0.076 Sum_probs=86.1
Q ss_pred CCcceeecc-cCCEEEEeec--CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-eeEEEee----
Q psy17021 10 DEVPYAMCP-FQGALLVGVG--RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-MEFVHKT---- 81 (199)
Q Consensus 10 ~~~~~~~~~-f~~~ll~~~~--~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-lesVh~~---- 81 (199)
...|.+++. =+|++.++.. +.+..||.. .++.+- . .|........+....++++++++. -..+...
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~---~--~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g 92 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEF---E--VPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKG 92 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE---E--CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEE---E--CCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCC
Confidence 347777764 3688988874 789999976 333221 1 111111122222223345555322 1112111
Q ss_pred -----cc---CCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEE
Q psy17021 82 -----SV---DEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFL 149 (199)
Q Consensus 82 -----~~---kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~l 149 (199)
.. ...+.++..- +|++.++- ++.|..|+.. .++.... .......+..+... ++.+.++|...+ .+
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~-~i 169 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQNN-SI 169 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTTT-EE
T ss_pred CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecCCC-eE
Confidence 11 1334554433 56777766 5678888776 3333221 11112346666653 344888887543 36
Q ss_pred EEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCc-EEEE
Q psy17021 150 VRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN-VCIV 194 (199)
Q Consensus 150 l~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gN-l~vl 194 (199)
.+|++ .+++..+.-.....+..++.+=.++.+.+++..++ ++.+
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 214 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRI 214 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEE
Confidence 67776 55555554333334455554432334555554433 4443
No 161
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=83.13 E-value=16 Score=29.02 Aligned_cols=123 Identities=11% Similarity=0.087 Sum_probs=59.9
Q ss_pred eeecc-cCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEE----------eec
Q psy17021 14 YAMCP-FQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVH----------KTS 82 (199)
Q Consensus 14 ~~~~~-f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh----------~~~ 82 (199)
.++.. -+|+|.+|..+ |..||. ..+.+.+-.........+ .. . ++++++|..-..+. ...
T Consensus 63 ~~~~~~~~g~l~v~t~~-l~~~d~-~g~~~~~~~~~~~~~~~~----~~--~-~~~l~v~t~~~~l~~~d~~g~~~~~~~ 133 (330)
T 3hxj_A 63 CRPSIGKDGTIYFGSDK-VYAINP-DGTEKWRFDTKKAIVSDF----TI--F-EDILYVTSMDGHLYAINTDGTEKWRFK 133 (330)
T ss_dssp ECCEETTTTEECCSSCE-EEEECC-CGGGGGGSCC-----CCE----EE--E-TTEEEEECTTSEEEEECTTSCEEEEEE
T ss_pred cceEEecCCcEEEecCc-EEEECC-CCcEEEEEECCCCcccCc----eE--E-CCEEEEEecCCEEEEEcCCCCEEEEEc
Confidence 44444 38999999988 888886 333443322221011111 11 1 46676643211122 222
Q ss_pred cCC-cceEEccc-cCeEEEEeC-CEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEE
Q psy17021 83 VDE-VPYAMCPF-QGALLVGVG-RYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLV 150 (199)
Q Consensus 83 ~kG-~v~aL~~f-~g~LLaavg-~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll 150 (199)
..+ .+.++..- +|.|.+|.. +.|..|+.. .+++...... ...+.++.. .++.+.+|. ..+..+
T Consensus 134 ~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~--~~~~~~~~~d~~g~l~v~t--~~l~~~ 200 (330)
T 3hxj_A 134 TKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTN--DAITSAASIGKDGTIYFGS--DKVYAI 200 (330)
T ss_dssp CSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECS--SCCCSCCEECTTCCEEEES--SSEEEE
T ss_pred CCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecC--CCceeeeEEcCCCEEEEEe--CEEEEE
Confidence 222 22333333 577888875 888888887 4433322222 112333333 356677887 554433
No 162
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=82.74 E-value=16 Score=28.94 Aligned_cols=104 Identities=14% Similarity=0.075 Sum_probs=55.9
Q ss_pred EEccccCeEEEEeCC----EEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEecc-cc-EEEEEEeCCCCeEE
Q psy17021 89 AMCPFQGALLVGVGR----YLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQ-ES-VFLVRYKRYENQLL 160 (199)
Q Consensus 89 aL~~f~g~LLaavg~----~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~-~S-v~ll~y~~~~~~l~ 160 (199)
++.|=..+++++-+. +|.+|++...+.++.... ...+.++.. .++++++++.. .. +.++.+++.. .+.
T Consensus 90 ~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g-~~~ 165 (331)
T 3u4y_A 90 DITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI---PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG-VLF 165 (331)
T ss_dssp EECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC---CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC-CEE
T ss_pred EECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC---CCCccceEECCCCCEEEEEecCCCceEEEEEECCCC-cEe
Confidence 344433345544445 899999987766554333 223455554 45578888876 56 8888776432 222
Q ss_pred EEecc--CCceeEEEEEEEeCC-eEEEEc-CCCcEEEEee
Q psy17021 161 IFADD--TQPRWITTSCVLDYN-TVASAD-KFGNVCIVST 196 (199)
Q Consensus 161 ~varD--~~~~wvta~~~Ld~~-t~l~aD-~~gNl~vlr~ 196 (199)
..... .......++.+-.++ .+++++ ..+.+.++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 166 DTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp EEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred ecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 11100 112234555554333 455555 4566777754
No 163
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=82.20 E-value=18 Score=29.18 Aligned_cols=98 Identities=8% Similarity=0.076 Sum_probs=57.3
Q ss_pred cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccc-cEEEEEEeCCCCeEEEEeccCCce
Q psy17021 94 QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQE-SVFLVRYKRYENQLLIFADDTQPR 169 (199)
Q Consensus 94 ~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~-Sv~ll~y~~~~~~l~~varD~~~~ 169 (199)
+|+|.++- +++|..|+...+ ...... .+..+..+... ++.++|+|... +..+++|+...+++..++.-...+
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g~-~~~~~~---~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~ 117 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDGN-QQIHAT---VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAI 117 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTCC-EEEEEE---CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCS
T ss_pred CCCEEEEeCCCCeEEEECCCCc-eEEEEe---CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCcc
Confidence 45555543 566766766543 222222 23356667654 34578898653 567888887778787776543334
Q ss_pred eEEEEEEEeCCeEEEEcC-CCcEEEEe
Q psy17021 170 WITTSCVLDYNTVASADK-FGNVCIVS 195 (199)
Q Consensus 170 wvta~~~Ld~~t~l~aD~-~gNl~vlr 195 (199)
........+...++++|. .++|+.+.
T Consensus 118 ~~~g~~~~~~~~~~v~d~~~g~i~~~d 144 (306)
T 2p4o_A 118 FLNGITPLSDTQYLTADSYRGAIWLID 144 (306)
T ss_dssp CEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred ccCcccccCCCcEEEEECCCCeEEEEe
Confidence 444444444456777885 67666653
No 164
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=81.64 E-value=16 Score=28.21 Aligned_cols=174 Identities=10% Similarity=0.041 Sum_probs=84.3
Q ss_pred Ccceeec-ccCCEEEEeec--CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-eeEEEe------
Q psy17021 11 EVPYAMC-PFQGALLVGVG--RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-MEFVHK------ 80 (199)
Q Consensus 11 ~~~~~~~-~f~~~ll~~~~--~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-lesVh~------ 80 (199)
..|.+++ .-+|++.++.. +.+..||.. .+..+-.... ....+ ..+....++++++++. -..+..
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~--~~~~~---~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 88 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPT--PDAKV---MCLTISSDGEVWFTENAANKIGRITKKGI 88 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSS--TTCCE---EEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCc--ccCce---eeEEECCCCCEEEeCCCCCeEEEECCCCc
Confidence 4677776 44789998874 679999976 3332211000 00122 2222223345544321 011111
Q ss_pred ---ec---cCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEE
Q psy17021 81 ---TS---VDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLV 150 (199)
Q Consensus 81 ---~~---~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll 150 (199)
.. -...+.++..- +|+|.++. ++.|..|+. ..+....... .....+..+... ++.+.+++...+ .+.
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~-~i~ 165 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELP-NKGSYPSFITLGSDNALWFTENQNN-AIG 165 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECS-STTCCEEEEEECTTSCEEEEETTTT-EEE
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCC-CCCCCCceEEEcCCCCEEEEeCCCC-EEE
Confidence 11 12245555443 47888776 568888887 3333222111 112346666664 347788886543 356
Q ss_pred EEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcC-CCcEEEE
Q psy17021 151 RYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK-FGNVCIV 194 (199)
Q Consensus 151 ~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~-~gNl~vl 194 (199)
+|++ .+++..+.-......+.++.+-.++.+.+++. .+.+..+
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 209 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRI 209 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEE
Confidence 6776 55565543222233444544432334444443 3334433
No 165
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=81.14 E-value=26 Score=30.22 Aligned_cols=96 Identities=7% Similarity=0.007 Sum_probs=56.6
Q ss_pred CCcceEEc--cccCeEEE--EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021 84 DEVPYAMC--PFQGALLV--GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 84 kG~v~aL~--~f~g~LLa--avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
.++++++. |-.+.++| +..++|++|++...+..... .. ....+.++.- .++++++|..-..|.++ +....
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~-~~-~~~~v~~v~wspdg~~lasgs~dg~v~iw--d~~~~ 224 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT-LP-STVAVTSVCWSPKGKQLAVGKQNGTVVQY--LPTLQ 224 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE-EC-GGGCEEEEEECTTSSCEEEEETTSCEEEE--CTTCC
T ss_pred CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec-cC-CCCceeEEEEcCCCCEEEEEcCCCcEEEE--ccCCc
Confidence 45676654 33355554 34789999999766432211 11 1123555553 57899999977777765 43323
Q ss_pred eEEEEeccC-----CceeEEEEEEEeCCeEE
Q psy17021 158 QLLIFADDT-----QPRWITTSCVLDYNTVA 183 (199)
Q Consensus 158 ~l~~varD~-----~~~wvta~~~Ld~~t~l 183 (199)
....+.... .+..++++.+..+..++
T Consensus 225 ~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 225 EKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred ccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 233332221 23589999998777666
No 166
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=81.01 E-value=18 Score=28.37 Aligned_cols=99 Identities=12% Similarity=0.012 Sum_probs=53.7
Q ss_pred eEEEEe--CCEEEEEEcC-Ccceeee---eeccCcC-ceEEEEEEe-CCEEEEEeccccEEEEEEeCCCCeE-EEEeccC
Q psy17021 96 ALLVGV--GRYLRLYDLG-KKKLLRK---CENKHLP-NLIVKIESM-GHRIYVSDVQESVFLVRYKRYENQL-LIFADDT 166 (199)
Q Consensus 96 ~LLaav--g~~v~vy~l~-~~~Ll~~---~~~~~~~-~~i~~l~~~-~~~IlVGD~~~Sv~ll~y~~~~~~l-~~varD~ 166 (199)
.|.++- ++.|.+|++. ..++... ....... ..+..+... +..+.|++...+ .+.+|+++.+++ ..+. .
T Consensus 189 ~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~-~i~~~d~~~g~~~~~~~--~ 265 (314)
T 1pjx_A 189 QLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS-HIEVFGPDGGQPKMRIR--C 265 (314)
T ss_dssp EEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT-EEEEECTTCBSCSEEEE--C
T ss_pred EEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC-EEEEEcCCCCcEeEEEe--C
Confidence 455553 5789999875 3332211 1111111 346666653 346788876544 466778763333 3332 2
Q ss_pred CceeEEEEEEEeC-Ce-EEEEcCCCcEEEEeec
Q psy17021 167 QPRWITTSCVLDY-NT-VASADKFGNVCIVSTY 197 (199)
Q Consensus 167 ~~~wvta~~~Ld~-~t-~l~aD~~gNl~vlr~~ 197 (199)
...+++++.+-.+ ++ ++++...+.|+.+...
T Consensus 266 ~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 266 PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 2367888888322 22 4455556788887654
No 167
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=80.82 E-value=19 Score=28.48 Aligned_cols=161 Identities=12% Similarity=0.056 Sum_probs=77.8
Q ss_pred cCCEEEEee-cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCee----------eEEEeeccCC-c
Q psy17021 19 FQGALLVGV-GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAM----------EFVHKTSVDE-V 86 (199)
Q Consensus 19 f~~~ll~~~-~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdkl----------esVh~~~~kG-~ 86 (199)
.+|++.+|. ++.|..||.. .+.+.+.... ..+ +.......++++++|..- +.+......+ .
T Consensus 106 ~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~----~~~--~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~ 178 (330)
T 3hxj_A 106 FEDILYVTSMDGHLYAINTD-GTEKWRFKTK----KAI--YATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAI 178 (330)
T ss_dssp ETTEEEEECTTSEEEEECTT-SCEEEEEECS----SCC--CSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCC
T ss_pred ECCEEEEEecCCEEEEEcCC-CCEEEEEcCC----Cce--eeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCc
Confidence 399999998 5779999976 3333222211 111 111222224556554321 1222222222 2
Q ss_pred ceEEcc-ccCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCC-EEEEEeccccEEEEEEeCCCCeEEEEec
Q psy17021 87 PYAMCP-FQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH-RIYVSDVQESVFLVRYKRYENQLLIFAD 164 (199)
Q Consensus 87 v~aL~~-f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~-~IlVGD~~~Sv~ll~y~~~~~~l~~var 164 (199)
+.++.. -+|.|.+|. ..|..|+ .+.+.+-..... ...+.++...++ .|.+|..-.++ ..|++....+.....
T Consensus 179 ~~~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~--~~~~~~~~~~~~g~l~v~t~~~gl--~~~~~~g~~~~~~~~ 252 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAG--YWTVTRPAISEDGTIYVTSLDGHL--YAINPDGTEKWRFKT 252 (330)
T ss_dssp CSCCEECTTCCEEEES-SSEEEEC-TTSCEEEEECCS--SCCCSCCEECTTSCEEEEETTTEE--EEECTTSCEEEEEEC
T ss_pred eeeeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccC--CcceeceEECCCCeEEEEcCCCeE--EEECCCCCEeEEeeC
Confidence 333333 267888888 8888888 433332222221 122444444433 78888765554 444665555554443
Q ss_pred cCCceeEEEEEEEe-CCeEEEEcCCCcEEEEe
Q psy17021 165 DTQPRWITTSCVLD-YNTVASADKFGNVCIVS 195 (199)
Q Consensus 165 D~~~~wvta~~~Ld-~~t~l~aD~~gNl~vlr 195 (199)
+... ..+ -.+| ++.+.++...|.|+.+.
T Consensus 253 ~~~~--~~~-~~~~~~g~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 253 GKRI--ESS-PVIGNTDTIYFGSYDGHLYAIN 281 (330)
T ss_dssp SSCC--CSC-CEECTTSCEEEECTTCEEEEEC
T ss_pred CCCc--ccc-ceEcCCCeEEEecCCCCEEEEC
Confidence 2211 111 2224 44555555566666553
No 168
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=80.47 E-value=21 Score=28.78 Aligned_cols=97 Identities=14% Similarity=0.043 Sum_probs=48.6
Q ss_pred CeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCcee
Q psy17021 95 GALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRW 170 (199)
Q Consensus 95 g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~w 170 (199)
|+++++ -++.|.+|+....+++-+..... ...+.++. ..|++++ .+ ... +..|+++...+-.+.-. ....
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~-~~~~~~~~~~pdG~ilv-s~-~~~--V~~~d~~G~~~W~~~~~-~~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-GWECNSVAATKAGEILF-SY-SKG--AKMITRDGRELWNIAAP-AGCE 78 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCT-TCCCCEEEECTTSCEEE-EC-BSE--EEEECTTSCEEEEEECC-TTCE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCc-cCCCcCeEECCCCCEEE-eC-CCC--EEEECCCCCEEEEEcCC-CCcc
Confidence 555555 36778888885555544333221 01223333 3455444 32 233 56677754444444432 2235
Q ss_pred EEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 171 ITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 171 vta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
+.++.++.+..++++|...|-.++.++
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVN 105 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEEC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEe
Confidence 667777766666666554343444433
No 169
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=79.99 E-value=37 Score=31.26 Aligned_cols=145 Identities=14% Similarity=0.098 Sum_probs=78.4
Q ss_pred ceeecccCCEEEEeecCeeEEEecchhhhhhh-hhhcccccCceeeeeEEEEEcCceeEECCe--eeE-------EEeec
Q psy17021 13 PYAMCPFQGALLVGVGRYLRLYDLGKKKLLRK-CENKVRIKGFRKAHQTHTHSGRSDRLVGNA--MEF-------VHKTS 82 (199)
Q Consensus 13 ~~~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k-~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk--les-------Vh~~~ 82 (199)
+.++..-+|.|.+|..+.|..||...+++-+- .... .+|.. .+..+....++++.+|-. +-. +....
T Consensus 105 i~~i~~~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~-~l~~~--~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~ 181 (758)
T 3ott_A 105 VRTMALQGDTLWLGALNGLYTYQLQSRKLTSFDTRRN-GLPNN--TIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFEGIP 181 (758)
T ss_dssp EEEEEEETTEEEEEETTEEEEEETTTCCEEEECHHHH-CCSCS--CEEEEEECTTCCEEEEETTEEEEEETTTTEEEEEC
T ss_pred EEEEEecCCcEEEEcCCcceeEeCCCCeEEEeccCCC-CcCCC--eEEEEEEcCCCCEEEEeCCCHhhCccCCCceEEec
Confidence 44565668999999998999999765443211 1111 12221 134444444567766421 110 11111
Q ss_pred cC-------CcceEEcccc-C-eEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEEEE
Q psy17021 83 VD-------EVPYAMCPFQ-G-ALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLVRY 152 (199)
Q Consensus 83 ~k-------G~v~aL~~f~-g-~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll~y 152 (199)
.. ..++++..-. | .|.+|..+-|..|+...+++....... ...|.++... ++.+.+|- ..+ +..|
T Consensus 182 ~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~--~~~i~~i~~d~~g~lWigT-~~G--l~~~ 256 (758)
T 3ott_A 182 LPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFH--NNSIKSLALDGNGDLLAGT-DNG--LYVY 256 (758)
T ss_dssp CCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETTTTEEEEEEEEE--EEEEEEEEECTTCCEEEEE-TTE--EEEE
T ss_pred CCCccccccceeEEEEEECCCCEEEEEECCCCeEEcCCCCeEEeccCCC--CCeEEEEEEcCCCCEEEEe-CCc--eeEE
Confidence 11 1256666543 3 477777667888887666543322111 2346666654 45777887 355 5667
Q ss_pred eCCCCeEEEEecc
Q psy17021 153 KRYENQLLIFADD 165 (199)
Q Consensus 153 ~~~~~~l~~varD 165 (199)
+++.+++..+..+
T Consensus 257 ~~~~~~~~~~~~~ 269 (758)
T 3ott_A 257 HNDTTPLQHIIHD 269 (758)
T ss_dssp CCTTSCCEEECCC
T ss_pred ecCCCcEEEEEcC
Confidence 7777666665443
No 170
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=79.84 E-value=28 Score=29.83 Aligned_cols=107 Identities=11% Similarity=0.016 Sum_probs=58.5
Q ss_pred EEccccCeEEEEe-CCEEEEEEcCCcceeeeee--cc-CcCceEE-EEEE--eCCEEEEEeccccEEEEEEeCCCCeEEE
Q psy17021 89 AMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCE--NK-HLPNLIV-KIES--MGHRIYVSDVQESVFLVRYKRYENQLLI 161 (199)
Q Consensus 89 aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~--~~-~~~~~i~-~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~ 161 (199)
++.|-+|.|.++- +.+|+.|+.........+. .. .....+. .+.. .++++++.|.... .+.+|+.+.. ...
T Consensus 225 av~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~-~I~~~~~~g~-~~~ 302 (409)
T 3hrp_A 225 ALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS-SVYKITPDGE-CEW 302 (409)
T ss_dssp EECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT-EEEEECTTCC-EEE
T ss_pred EEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC-EEEEEecCCC-EEE
Confidence 4455578887765 3578888886554222111 11 0001111 4444 3689999998876 4777876655 444
Q ss_pred EeccC-------------CceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 162 FADDT-------------QPRWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 162 varD~-------------~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
++... .-.|..++.+-.+..+.++|..+|=.+.+++
T Consensus 303 ~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 303 FCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp EEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEE
T ss_pred EEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEE
Confidence 43322 1245677766545568888872232344443
No 171
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=79.31 E-value=27 Score=29.26 Aligned_cols=112 Identities=13% Similarity=0.111 Sum_probs=73.5
Q ss_pred eEEEeeccCCcce--EEccccCeEEEEeCC--EEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEE
Q psy17021 76 EFVHKTSVDEVPY--AMCPFQGALLVGVGR--YLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVR 151 (199)
Q Consensus 76 esVh~~~~kG~v~--aL~~f~g~LLaavg~--~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~ 151 (199)
+.+...+.+...+ .|.--.+.|..+-|. +|+.+++...+.++.. .. ...+...+...++++.+.+-..+. ++.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~ltw~~~~-v~V 120 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLTWTEGL-LFT 120 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEESSSCE-EEE
T ss_pred EEEEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEEccCCE-EEE
Confidence 5555566666663 444334678888875 6999999888776665 54 344577788889999999887776 677
Q ss_pred EeCCCCeE-EEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEE
Q psy17021 152 YKRYENQL-LIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194 (199)
Q Consensus 152 y~~~~~~l-~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vl 194 (199)
|+.+..++ ..+.-... -|-.+ =|...++.+|..+.|+++
T Consensus 121 ~D~~Tl~~~~ti~~~~e-GwGLt---~Dg~~L~vSdGs~~l~~i 160 (268)
T 3nok_A 121 WSGMPPQRERTTRYSGE-GWGLC---YWNGKLVRSDGGTMLTFH 160 (268)
T ss_dssp EETTTTEEEEEEECSSC-CCCEE---EETTEEEEECSSSEEEEE
T ss_pred EECCcCcEEEEEeCCCc-eeEEe---cCCCEEEEECCCCEEEEE
Confidence 78765433 34443322 24443 256788888876665544
No 172
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=79.03 E-value=32 Score=29.98 Aligned_cols=60 Identities=8% Similarity=-0.037 Sum_probs=34.7
Q ss_pred CCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 135 ~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
+.+++.|..-..|.+. +-..++....-+++....++++.|= |..+++.+-.+++|.+.++
T Consensus 295 g~~lASgS~DgTIkIW--Dl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 295 DHCAAAILTSGTIAIW--DLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTEEEEEETTSCEEEE--ETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCEEEEEcCCCcEEEE--ECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 4455666555666654 4455555444444333233345555 4457888899999998765
No 173
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=78.76 E-value=37 Score=30.57 Aligned_cols=94 Identities=16% Similarity=0.170 Sum_probs=52.4
Q ss_pred EEEEEEcCC-cceeeeeeccCcCceEEEEE-EeCCEEEEEec---cccEEEEEEeCCCCeEEEEeccCCceeE---EEEE
Q psy17021 104 YLRLYDLGK-KKLLRKCENKHLPNLIVKIE-SMGHRIYVSDV---QESVFLVRYKRYENQLLIFADDTQPRWI---TTSC 175 (199)
Q Consensus 104 ~v~vy~l~~-~~Ll~~~~~~~~~~~i~~l~-~~~~~IlVGD~---~~Sv~ll~y~~~~~~l~~varD~~~~wv---ta~~ 175 (199)
+|++|++.. .+............++.++. ..|++|+++-. .....+..++...++...+.......|+ .++.
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE
Confidence 677778766 55433221100112333322 66778877644 2356777888777777666665555554 3556
Q ss_pred EEeC-CeEEEEcCCCcEEEEeec
Q psy17021 176 VLDY-NTVASADKFGNVCIVSTY 197 (199)
Q Consensus 176 ~Ld~-~t~l~aD~~gNl~vlr~~ 197 (199)
+..+ ..++.++.+|...++.++
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEEC
T ss_pred ECCCCeEEEEecCCCccEEEEEc
Confidence 6533 355666777755555443
No 174
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=78.73 E-value=26 Score=28.76 Aligned_cols=95 Identities=21% Similarity=0.228 Sum_probs=56.3
Q ss_pred cCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEE
Q psy17021 94 QGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWIT 172 (199)
Q Consensus 94 ~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvt 172 (199)
.|.+.++- +..+..++....+.+-..... ....+...++.+++++--..+ ..|+...++..--.........+
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~----~~~~~~~~~~~l~~~~~~g~l--~~~d~~tG~~~w~~~~~~~~~~~ 312 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKRELG----SVNDFIVDGNRIYLVDQNDRV--MALTIDGGVTLWTQSDLLHRLLT 312 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECCC----CEEEEEEETTEEEEEETTCCE--EEEETTTCCEEEEECTTTTSCCC
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccCC----CCCCceEECCEEEEEcCCCeE--EEEECCCCcEEEeecccCCCccc
Confidence 46677665 678888998766544332221 134566679999999875554 45566555543222212112222
Q ss_pred EEEEEeCCeEEEEcCCCcEEEEe
Q psy17021 173 TSCVLDYNTVASADKFGNVCIVS 195 (199)
Q Consensus 173 a~~~Ld~~t~l~aD~~gNl~vlr 195 (199)
+ -.+.++.+++++.+|.++.+.
T Consensus 313 ~-~~~~~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 313 S-PVLYNGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp C-CEEETTEEEEECTTSEEEEEE
T ss_pred C-CEEECCEEEEEeCCCeEEEEE
Confidence 2 234677888888888888775
No 175
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=78.14 E-value=23 Score=30.95 Aligned_cols=103 Identities=11% Similarity=0.127 Sum_probs=59.8
Q ss_pred ceEEccccCeEEEEeCCEEEEEEcCCcc---------eeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCC
Q psy17021 87 PYAMCPFQGALLVGVGRYLRLYDLGKKK---------LLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 87 v~aL~~f~g~LLaavg~~v~vy~l~~~~---------Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
..++.+-.|.++||-++.+++|++.+-+ ........ .+. ++.+.-.++.++|| ..+ .+.-|+...-
T Consensus 42 lLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~fd~~~L~v~--~~~-~l~v~dv~sl 116 (388)
T 1xip_A 42 NLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCFHGDQVLVS--TRN-ALYSLDLEEL 116 (388)
T ss_dssp CEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEEETTEEEEE--ESS-EEEEEESSST
T ss_pred EEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEECCCEEEEE--cCC-cEEEEEchhh
Confidence 3455666788889999999999874211 11112222 345 77777777899999 333 3555543211
Q ss_pred -eEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 158 -QLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 158 -~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
+-..+ ..+. .-+.++.++..+ ++....+|.|+++.+.
T Consensus 117 ~~~~~~-~~~~-~~v~~i~~~~p~-~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 117 SEFRTV-TSFE-KPVFQLKNVNNT-LVILNSVNDLSALDLR 154 (388)
T ss_dssp TCEEEE-EECS-SCEEEEEECSSE-EEEEETTSEEEEEETT
T ss_pred hccCcc-ceee-cceeeEEecCCC-EEEEECCCCEEEEEcc
Confidence 11111 1111 125566666543 7778889999998654
No 176
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=78.04 E-value=23 Score=27.73 Aligned_cols=94 Identities=7% Similarity=-0.077 Sum_probs=54.1
Q ss_pred ccccCeEEEEe----CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEec
Q psy17021 91 CPFQGALLVGV----GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFAD 164 (199)
Q Consensus 91 ~~f~g~LLaav----g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var 164 (199)
.+-.|+|.++- +++|..+++........... ....+..+.. .++++++.|.... .+.+|+.+......+..
T Consensus 130 d~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~--~~~~P~gia~d~~~~~lyv~d~~~~-~I~~~~~~g~~~~~~~~ 206 (267)
T 1npe_A 130 DPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD--NLGLPNGLTFDAFSSQLCWVDAGTH-RAECLNPAQPGRRKVLE 206 (267)
T ss_dssp ETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT--TCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTEEEEEEEEE
T ss_pred eeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC--CCCCCcEEEEcCCCCEEEEEECCCC-EEEEEecCCCceEEEec
Confidence 33457776654 35777777754322111111 1224556655 4679999998764 35566665555544444
Q ss_pred cCCceeEEEEEEEeCCeEEEEcCCCc
Q psy17021 165 DTQPRWITTSCVLDYNTVASADKFGN 190 (199)
Q Consensus 165 D~~~~wvta~~~Ld~~t~l~aD~~gN 190 (199)
. ..+..++. +|++.+.++|...|
T Consensus 207 ~--~~~P~gi~-~d~~~lyva~~~~~ 229 (267)
T 1npe_A 207 G--LQYPFAVT-SYGKNLYYTDWKTN 229 (267)
T ss_dssp C--CCSEEEEE-EETTEEEEEETTTT
T ss_pred C--CCCceEEE-EeCCEEEEEECCCC
Confidence 3 23445554 47888888997654
No 177
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=75.02 E-value=32 Score=30.75 Aligned_cols=103 Identities=9% Similarity=-0.024 Sum_probs=59.4
Q ss_pred CcceEEccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCeE-
Q psy17021 85 EVPYAMCPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQL- 159 (199)
Q Consensus 85 G~v~aL~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~l- 159 (199)
.+++++.| .|+++++- .++|.+|+....+++..-... .. +..+. ..+.++++++.-.+|.++..++...+.
T Consensus 140 ~~~~~~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g-~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 140 KQLNDLDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp SCCSCCCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECS-TT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE
T ss_pred ccccccCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecC-cc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE
Confidence 34555544 56776665 478999999877766544322 12 44443 357899999988777776542133333
Q ss_pred EEEeccCCceeEEEEEEEe-----CCeEEEEc-CCCcEEEE
Q psy17021 160 LIFADDTQPRWITTSCVLD-----YNTVASAD-KFGNVCIV 194 (199)
Q Consensus 160 ~~varD~~~~wvta~~~Ld-----~~t~l~aD-~~gNl~vl 194 (199)
..+. ...++.++.+=. ...++++. ..+.+.++
T Consensus 216 ~~i~---~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~ 253 (543)
T 1nir_A 216 AEIK---IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM 253 (543)
T ss_dssp EEEE---CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEE
T ss_pred EEEe---cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEE
Confidence 2232 233556666542 33444444 45666555
No 178
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=72.69 E-value=35 Score=27.34 Aligned_cols=111 Identities=10% Similarity=0.135 Sum_probs=64.6
Q ss_pred CCcceEEcc-ccCeEEE-Ee-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe----CCEEEEEeccccEEEEEEeCCC
Q psy17021 84 DEVPYAMCP-FQGALLV-GV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM----GHRIYVSDVQESVFLVRYKRYE 156 (199)
Q Consensus 84 kG~v~aL~~-f~g~LLa-av-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~----~~~IlVGD~~~Sv~ll~y~~~~ 156 (199)
+++|+++.- .+|+.|| |- .++|++|++...+......+..-...|.++.-. +++++.|..-..|.+.......
T Consensus 13 ~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC
T ss_pred cCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc
Confidence 455555431 2354443 33 589999999654321122232112347777642 6889999888888887543321
Q ss_pred -CeEEEEeccCCceeEEEEEEEeC---CeEEEEcCCCcEEEEee
Q psy17021 157 -NQLLIFADDTQPRWITTSCVLDY---NTVASADKFGNVCIVST 196 (199)
Q Consensus 157 -~~l~~varD~~~~wvta~~~Ld~---~t~l~aD~~gNl~vlr~ 196 (199)
.....+. -....|+++.+-.+ ..++.+..++.+.++.+
T Consensus 93 ~~~~~~~~--~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~ 134 (316)
T 3bg1_A 93 WEKSHEHA--GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTY 134 (316)
T ss_dssp CCEEEEEC--CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEE
T ss_pred ceEEEEcc--CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEec
Confidence 1222222 23456788888643 36888899999888754
No 179
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=72.29 E-value=34 Score=26.99 Aligned_cols=172 Identities=12% Similarity=0.118 Sum_probs=83.4
Q ss_pred ecccCCEEEEeecC----eeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-----ee---------E
Q psy17021 16 MCPFQGALLVGVGR----YLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-----ME---------F 77 (199)
Q Consensus 16 ~~~f~~~ll~~~~~----~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-----le---------s 77 (199)
+.+-..+|+++-+. .+++||+...+.++.-... ..+. -+.+. ..+.++++.+. .. .
T Consensus 91 ~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~----~~~~-~~~~s-pdg~~l~~~~~~~~~~i~~~~~~~~g~~ 164 (331)
T 3u4y_A 91 ITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP----YDAV-GIAIS-PNGNGLILIDRSSANTVRRFKIDADGVL 164 (331)
T ss_dssp ECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC----TTEE-EEEEC-TTSSCEEEEEETTTTEEEEEEECTTCCE
T ss_pred ECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC----CCcc-ceEEC-CCCCEEEEEecCCCceEEEEEECCCCcE
Confidence 44545566666656 8999999776665532222 1111 11111 11234554321 11 0
Q ss_pred ----EEeeccCCcceEEccc-cCe-EEEEe--CCEEEEEEcCCcce---eeeeeccCcCceEEEEE--EeCCEEEEEecc
Q psy17021 78 ----VHKTSVDEVPYAMCPF-QGA-LLVGV--GRYLRLYDLGKKKL---LRKCENKHLPNLIVKIE--SMGHRIYVSDVQ 144 (199)
Q Consensus 78 ----Vh~~~~kG~v~aL~~f-~g~-LLaav--g~~v~vy~l~~~~L---l~~~~~~~~~~~i~~l~--~~~~~IlVGD~~ 144 (199)
.........+.++.-- +|+ ++++- +++|.+|++...++ +..... ...+..+. ..+.++++++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~v~~~~ 241 (331)
T 3u4y_A 165 FDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT---NNLPGTIVVSRDGSTVYVLTES 241 (331)
T ss_dssp EEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC---SSCCCCEEECTTSSEEEEECSS
T ss_pred eecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC---CCCCceEEECCCCCEEEEEEcC
Confidence 0111222334443322 344 65554 57899999976665 333222 22233333 357788888764
Q ss_pred ccEEEEEEeCCCCeEEEEe---cc--CCceeE---EEEEEE-eCCeEEEE-cCCCcEEEEeec
Q psy17021 145 ESVFLVRYKRYENQLLIFA---DD--TQPRWI---TTSCVL-DYNTVASA-DKFGNVCIVSTY 197 (199)
Q Consensus 145 ~Sv~ll~y~~~~~~l~~va---rD--~~~~wv---ta~~~L-d~~t~l~a-D~~gNl~vlr~~ 197 (199)
..- +..|+.+.+++..+. .. ..+.+. .++.+- |...++++ ...+.+.++.+.
T Consensus 242 ~~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 242 TVD-VFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp EEE-EEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCE-EEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 422 444777777663332 22 112222 224444 33344444 445577777654
No 180
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=72.16 E-value=62 Score=29.93 Aligned_cols=145 Identities=12% Similarity=0.123 Sum_probs=78.4
Q ss_pred ceeec-ccCCEEEEeecCeeEEEecchhhhhhhhhh-cccccCceeeeeEEEEEcCceeEECCeeeEEE-------eecc
Q psy17021 13 PYAMC-PFQGALLVGVGRYLRLYDLGKKKLLRKCEN-KVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVH-------KTSV 83 (199)
Q Consensus 13 ~~~~~-~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~-~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh-------~~~~ 83 (199)
+.+++ .=+|.|-+|.-+.|--||--+=+..+.... ...+++. .|..+....++++.+|-.-.... +..+
T Consensus 45 v~~I~qD~~G~lWigT~~GL~ryDG~~f~~~~~~~~~~~~l~~n--~I~~i~~d~~g~lWigT~~Gl~~yd~~~~~f~~~ 122 (795)
T 4a2l_A 45 VFSIDQDKRGNMWFATYDGVNKYDGYAFTVYQHNEDDPNSIAND--ISRIVKTDSQGRVWIGTRDGLSRYDEEKDIFQNF 122 (795)
T ss_dssp EEEEEECTTSCEEEEETTEEEEECSSCEEEECCCTTCTTSCSCS--CEEEEEECTTSCEEEEESSCEEEEETTTTEEEEE
T ss_pred eEEEEEcCCCCEEEeecCcCcccCCCceEEEeCCCCCCCccccc--ceeEEEECCCCCEEEEeCCchheeCCCCCeEEec
Confidence 45554 457899999999999999432133332111 1012222 14455555556776642111000 1111
Q ss_pred C----Cc---ceEEccc-cCeEEEEeCCEEEEEEcCCcceeeeeeccCcCce-EEEEEE-eCCEEEEEeccccEEEEEEe
Q psy17021 84 D----EV---PYAMCPF-QGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNL-IVKIES-MGHRIYVSDVQESVFLVRYK 153 (199)
Q Consensus 84 k----G~---v~aL~~f-~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~-i~~l~~-~~~~IlVGD~~~Sv~ll~y~ 153 (199)
. .. +.++..- +|.|.++.++.|..|+...+++....... .... +.++.. .++.+.+|....+ +++|+
T Consensus 123 ~~~~~~~~~~i~~i~~d~~g~lwi~t~~gl~~~~~~~~~~~~~~~~~-~~~~~i~~i~~d~~g~lwigt~~~G--l~~~~ 199 (795)
T 4a2l_A 123 FYEKNGKHLQVNGIEEISPEQLLISTPEGLIMFDIKESKFIDDSFST-AMHKTIASTLYRQGDQIYIGTSTDG--LYTYS 199 (795)
T ss_dssp CCEETTEECCCCEEEEEETTEEEEEETTEEEEEETTTTEEECSSSCH-HHHTCCEEEEEEETTEEEEEESSSC--EEEEE
T ss_pred cccccCCCceEEEEEECCCCCEEEEECCceEEEECCCCEEEeccCCC-CCCcceEEEEECCCCCEEEEECCCC--EEEEe
Confidence 1 11 6666655 57899999999999998765543211100 0012 455544 4678888876556 45677
Q ss_pred CCCCeEEEE
Q psy17021 154 RYENQLLIF 162 (199)
Q Consensus 154 ~~~~~l~~v 162 (199)
+..+++..+
T Consensus 200 ~~~~~~~~~ 208 (795)
T 4a2l_A 200 ITQKTFEKV 208 (795)
T ss_dssp TTTCCEEEC
T ss_pred CCCCeEEEe
Confidence 666666544
No 181
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=71.88 E-value=36 Score=27.04 Aligned_cols=158 Identities=12% Similarity=0.113 Sum_probs=81.6
Q ss_pred eeecccCCEEEEeec-------CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEE-CC-----eeeEEEe
Q psy17021 14 YAMCPFQGALLVGVG-------RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV-GN-----AMEFVHK 80 (199)
Q Consensus 14 ~~~~~f~~~ll~~~~-------~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v-gd-----klesVh~ 80 (199)
++++.++|++.+-=| +.+-.||+...+--+.. . +|... ........ +++|++ |. .+..+..
T Consensus 106 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~--~p~~r-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~ 179 (301)
T 2vpj_A 106 AGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG--D--MQTAR-EGAGLVVA-SGVIYCLGGYDGLNILNSVEK 179 (301)
T ss_dssp CEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE--E--CSSCC-BSCEEEEE-TTEEEEECCBCSSCBCCCEEE
T ss_pred eeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECC--C--CCCCc-ccceEEEE-CCEEEEECCCCCCcccceEEE
Confidence 556677888866543 46889998664432211 1 22211 11222333 467754 31 1222222
Q ss_pred ec-------------cCCcceEEccccCeEEEEeC-------CEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEE-E
Q psy17021 81 TS-------------VDEVPYAMCPFQGALLVGVG-------RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRI-Y 139 (199)
Q Consensus 81 ~~-------------~kG~v~aL~~f~g~LLaavg-------~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~I-l 139 (199)
.. ....-.+.+.++|+|++.-| +.+.+|+....+-....... .+..-.+..+.++.| +
T Consensus 180 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~i~v 258 (301)
T 2vpj_A 180 YDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT-TPRCYVGATVLRGRLYA 258 (301)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS-SCCBSCEEEEETTEEEE
T ss_pred EeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC-CcccceeEEEECCEEEE
Confidence 21 12222345556777655433 45788888766543333322 222323334445544 5
Q ss_pred EEeccc---cEEEEEEeCCCCeEEEEeccCCceeEEEEEEEe
Q psy17021 140 VSDVQE---SVFLVRYKRYENQLLIFADDTQPRWITTSCVLD 178 (199)
Q Consensus 140 VGD~~~---Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld 178 (199)
+|-.-. .-.+..|+++.++-..+..-..+|.-.++..++
T Consensus 259 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 259 IAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp ECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred EcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 564332 246788999888888887666666655555553
No 182
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=71.80 E-value=21 Score=30.66 Aligned_cols=100 Identities=11% Similarity=0.021 Sum_probs=56.3
Q ss_pred cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeE-EEEec--cCCc
Q psy17021 94 QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQL-LIFAD--DTQP 168 (199)
Q Consensus 94 ~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l-~~var--D~~~ 168 (199)
+|.|+++- +++|+.|+....++.........+. ..+...+++++++|....-.++.|++..+.. ..++. ....
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~ 218 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFS 218 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSC
T ss_pred CCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhc
Confidence 46776664 4789999998766554433321222 4455567899999987644667777654432 23310 1022
Q ss_pred eeEEEEEEEe-CCeEEEEcCCCcEEEEe
Q psy17021 169 RWITTSCVLD-YNTVASADKFGNVCIVS 195 (199)
Q Consensus 169 ~wvta~~~Ld-~~t~l~aD~~gNl~vlr 195 (199)
.++.++.+-. +..++.+|..+.++.+.
T Consensus 219 ~~p~~iav~p~~g~lyv~d~~~~I~~~d 246 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDSNKNFGRFN 246 (409)
T ss_dssp SCCCBCEECTTSSEEEEECTTCEEEEEE
T ss_pred CCcEEEEEeCCCCeEEEEECCCcEEEEE
Confidence 3444444432 34566678766565543
No 183
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=71.55 E-value=34 Score=27.29 Aligned_cols=82 Identities=9% Similarity=-0.004 Sum_probs=51.3
Q ss_pred CEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEE-EEEecc----ccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE
Q psy17021 103 RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRI-YVSDVQ----ESVFLVRYKRYENQLLIFADDTQPRWITTSCVL 177 (199)
Q Consensus 103 ~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~I-lVGD~~----~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L 177 (199)
+.+.+|+....+-.+..... .+..-....+.++.| ++|-.- ..-.+..|++..++-..++.-..+|.-.++..+
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 148 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPP-TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA 148 (306)
T ss_dssp CEEEEEETTTTEEEEEECCS-SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCeEEECCCCC-ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE
Confidence 67788888776544433332 233333334446655 455332 234577889999999999888888887777777
Q ss_pred eCCeEEEE
Q psy17021 178 DYNTVASA 185 (199)
Q Consensus 178 d~~t~l~a 185 (199)
++.-|+.+
T Consensus 149 ~~~iyv~G 156 (306)
T 3ii7_A 149 NGLIYVCG 156 (306)
T ss_dssp TTEEEEEC
T ss_pred CCEEEEEC
Confidence 66644443
No 184
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=70.26 E-value=39 Score=26.81 Aligned_cols=165 Identities=13% Similarity=0.027 Sum_probs=87.5
Q ss_pred eeecccCCEEEEeec-------CeeEEEecchhh---hhhhhhhcccccCceeeeeEEEEEcCceeEE-CC-----eeeE
Q psy17021 14 YAMCPFQGALLVGVG-------RYLRLYDLGKKK---LLRKCENKVRIKGFRKAHQTHTHSGRSDRLV-GN-----AMEF 77 (199)
Q Consensus 14 ~~~~~f~~~ll~~~~-------~~l~~y~~g~k~---ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v-gd-----kles 77 (199)
++++.++++|.+-=| +.+-.||+..++ --+- .. +|.... ....... +++|++ |. .+..
T Consensus 56 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~--~~--~p~~r~-~~~~~~~-~~~lyv~GG~~~~~~~~~ 129 (301)
T 2vpj_A 56 VASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSV--AP--MNVRRG-LAGATTL-GDMIYVSGGFDGSRRHTS 129 (301)
T ss_dssp CEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEE--CC--CSSCCB-SCEEEEE-TTEEEEECCBCSSCBCCE
T ss_pred ccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEEC--CC--CCCCcc-ceeEEEE-CCEEEEEcccCCCcccce
Confidence 566777888876433 468899986654 1111 11 222111 2222333 466754 31 1223
Q ss_pred EEeecc-------------CCcceEEccccCeEEEEe-------CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCE
Q psy17021 78 VHKTSV-------------DEVPYAMCPFQGALLVGV-------GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHR 137 (199)
Q Consensus 78 Vh~~~~-------------kG~v~aL~~f~g~LLaav-------g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~ 137 (199)
+..... .-.-.+.+.++|+|.+.- -+.+..|+....+-....... .+..-.++.+.++.
T Consensus 130 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~ 208 (301)
T 2vpj_A 130 MERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMA-TKRSGAGVALLNDH 208 (301)
T ss_dssp EEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCS-SCCBSCEEEEETTE
T ss_pred EEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCC-cccccceEEEECCE
Confidence 332221 112233444566665442 255777887665533333222 23333344445665
Q ss_pred E-EEEeccc---cEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEE
Q psy17021 138 I-YVSDVQE---SVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASA 185 (199)
Q Consensus 138 I-lVGD~~~---Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~a 185 (199)
| ++|-.-. +-.+..|+.+.++-.+++.-..+|.-.++..+++.-++.+
T Consensus 209 i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~G 260 (301)
T 2vpj_A 209 IYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIA 260 (301)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEC
T ss_pred EEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEc
Confidence 4 5554322 3357788999999999988777887777777766655544
No 185
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=68.90 E-value=35 Score=25.75 Aligned_cols=62 Identities=5% Similarity=-0.118 Sum_probs=37.2
Q ss_pred eCCEEE-EEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCC-eEE-EEcCCCcEEEEeec
Q psy17021 134 MGHRIY-VSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYN-TVA-SADKFGNVCIVSTY 197 (199)
Q Consensus 134 ~~~~Il-VGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~-t~l-~aD~~gNl~vlr~~ 197 (199)
.+++++ .+.--..+.++.++.+.+....+... +.++.++.+-.++ .++ +++.++++.++.++
T Consensus 139 dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 139 DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG--EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp TSSEEEEEEEETTEEEEEEEETTTCCEEECCCS--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCEEEEEECCCCceEEEEEECCCCcceEcccC--CCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 466665 56666677888887766666665543 3456777765343 333 44445666655544
No 186
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=67.97 E-value=86 Score=29.91 Aligned_cols=97 Identities=12% Similarity=0.048 Sum_probs=55.0
Q ss_pred EccccCeEEEEe-C--CEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEec
Q psy17021 90 MCPFQGALLVGV-G--RYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFAD 164 (199)
Q Consensus 90 L~~f~g~LLaav-g--~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var 164 (199)
+.|..|+|..+- | ++|...++........... ....+..|.. .+++|++.|.... .+.+++.+......+..
T Consensus 521 VDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~--~l~~P~GLavD~~~~~LYwaD~~~~-~I~~~d~dG~~~~~v~~ 597 (791)
T 3m0c_C 521 VDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSKLH-SISSIDVNGGNRKTILE 597 (791)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS--SCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEEE
T ss_pred EecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC--CCCCceEEEEecCCCeEEEEeCCCC-cEEEEecCCCceEEEec
Confidence 344566666554 2 4666666654332111111 1124566665 4789999998664 35556655544444443
Q ss_pred c-CCceeEEEEEEEeCCeEEEEcCCCc
Q psy17021 165 D-TQPRWITTSCVLDYNTVASADKFGN 190 (199)
Q Consensus 165 D-~~~~wvta~~~Ld~~t~l~aD~~gN 190 (199)
. ..-.+..++.. +++.+..+|...+
T Consensus 598 ~~~~l~~P~glav-~~~~lYwtD~~~~ 623 (791)
T 3m0c_C 598 DEKRLAHPFSLAV-FEDKVFWTDIINE 623 (791)
T ss_dssp CTTTTSSEEEEEE-ETTEEEEEETTTT
T ss_pred CCCccCCCCEEEE-eCCEEEEEECCCC
Confidence 3 33345666665 7888889997655
No 187
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=67.34 E-value=46 Score=27.26 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=45.0
Q ss_pred EEEEEEcC-Ccceeeeee-c--cCcCceEEEEEE---eCCEEEEEecc-ccEEEEEEeCCCCeEEEEe--ccCCceeEEE
Q psy17021 104 YLRLYDLG-KKKLLRKCE-N--KHLPNLIVKIES---MGHRIYVSDVQ-ESVFLVRYKRYENQLLIFA--DDTQPRWITT 173 (199)
Q Consensus 104 ~v~vy~l~-~~~Ll~~~~-~--~~~~~~i~~l~~---~~~~IlVGD~~-~Sv~ll~y~~~~~~l~~va--rD~~~~wvta 173 (199)
+|.+|++. ..++.+... . ......-..+.. .++++++++.. .+|.++..+.+ .|..++ .=..|.++..
T Consensus 283 ~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~--~l~~~~~~~~~~p~~~~~ 360 (365)
T 1jof_A 283 YIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE--FLHRVARVRIPEPGFGMN 360 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT--EEEEEEEEECCSTTEEEE
T ss_pred eEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh--hCceeeEEEcCCCcceee
Confidence 89999996 444543211 1 111112233455 58899999876 68889888754 676554 2234777777
Q ss_pred EEEEe
Q psy17021 174 SCVLD 178 (199)
Q Consensus 174 ~~~Ld 178 (199)
+.++|
T Consensus 361 ~~~~~ 365 (365)
T 1jof_A 361 AIWYD 365 (365)
T ss_dssp EEEEC
T ss_pred eEecC
Confidence 77775
No 188
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=66.88 E-value=51 Score=26.91 Aligned_cols=159 Identities=9% Similarity=0.004 Sum_probs=82.8
Q ss_pred EEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEECCee-eEEEeeccCC--------------
Q psy17021 22 ALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVGNAM-EFVHKTSVDE-------------- 85 (199)
Q Consensus 22 ~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vgdkl-esVh~~~~kG-------------- 85 (199)
.||++-++.+|..|+-..+...- .|. ......+... .++++|+.|.. ..|+....+|
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~------~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSL------IPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEE------ECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS
T ss_pred EEEEECCCeEEEEECCCcceEeh------hcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC
Confidence 58899999999999865432110 111 1111122221 23566554321 2233322222
Q ss_pred --cceEEc--cccCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021 86 --VPYAMC--PFQGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN 157 (199)
Q Consensus 86 --~v~aL~--~f~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~ 157 (199)
.+..+. +..|.|.++ -+++|.++++..+........ ....+..+.+ .+.++++.|.-..=.+.+++.+..
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~--~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~ 153 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC--TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC--CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC
Confidence 223322 345566554 246677777754322111111 1124566666 478999999765345777777665
Q ss_pred eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCc
Q psy17021 158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGN 190 (199)
Q Consensus 158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gN 190 (199)
....+..+ .-.|..++.+= +.+.+..+|...+
T Consensus 154 ~~~~~~~~-~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 154 DIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp CEEEEECS-SCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CeEEEEEC-CCCCceEEEEeccCCEEEEEECCCC
Confidence 55555443 34577777663 3557888887654
No 189
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=65.61 E-value=47 Score=26.06 Aligned_cols=66 Identities=8% Similarity=0.025 Sum_probs=36.4
Q ss_pred cCeEEEE--eCCEEEEEEcCCcceeeeeeccCc-CceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEE
Q psy17021 94 QGALLVG--VGRYLRLYDLGKKKLLRKCENKHL-PNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLL 160 (199)
Q Consensus 94 ~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~-~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~ 160 (199)
+++++++ -+++|.+|+....++++....... ...-..+...++++++++-..+ .+..|+.+.++..
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~-~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG-DIYGIDLDTCKNT 78 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTT-EEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCC-cEEEEeCCCCcEE
Confidence 4555544 368999999987766554433210 1122223334667877764433 3555676655543
No 190
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=65.53 E-value=56 Score=26.90 Aligned_cols=193 Identities=10% Similarity=0.045 Sum_probs=112.5
Q ss_pred eeEEecCCCc--ceeecccC-CEEEEeec----CeeEEEecchhhhhhhhhhcccccCcee------eeeEEEEEcCcee
Q psy17021 3 FVHKTSVDEV--PYAMCPFQ-GALLVGVG----RYLRLYDLGKKKLLRKCENKVRIKGFRK------AHQTHTHSGRSDR 69 (199)
Q Consensus 3 ~~h~t~~~~~--~~~~~~f~-~~ll~~~~----~~l~~y~~g~k~ll~k~~~~~~~~~~~~------~~~~~~~~~~~ri 69 (199)
.+++-+++.. |.-|.--. |+|.++.| +.|+.+|+-..+.++.-.... ..|.. ..+....|.++++
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~~lyv~t~~~~~v 88 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNEKLYQVVWLKNIG 88 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEETTCSEE
T ss_pred EEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC--CcceEEEEEeCCEEEEEEecCCEE
Confidence 4555666643 44554334 89999986 689999998878877533210 12221 2344455555565
Q ss_pred EE--CCeeeEEEeeccC-CcceEEccccCeEEEEeC-CEEEEEEcCCcceeeeeeccC--cC-ceEEEEEEeCCEEEEEe
Q psy17021 70 LV--GNAMEFVHKTSVD-EVPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKH--LP-NLIVKIESMGHRIYVSD 142 (199)
Q Consensus 70 ~v--gdklesVh~~~~k-G~v~aL~~f~g~LLaavg-~~v~vy~l~~~~Ll~~~~~~~--~~-~~i~~l~~~~~~IlVGD 142 (199)
.+ -+.++.+...++. +....+++=.++|.++-+ ++|.+++....+..+...... .+ ..+..+...+.++++..
T Consensus 89 ~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~ 168 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANI 168 (266)
T ss_dssp EEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred EEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEec
Confidence 33 2456677777777 777778875557777664 678888876655444333210 11 13555665577888887
Q ss_pred ccccEEEEEEeCCCCeEEEEec--c--------CCc--eeEEEEEEE-eCCeEEEEc-CCCcEEEEeecC
Q psy17021 143 VQESVFLVRYKRYENQLLIFAD--D--------TQP--RWITTSCVL-DYNTVASAD-KFGNVCIVSTYR 198 (199)
Q Consensus 143 ~~~Sv~ll~y~~~~~~l~~var--D--------~~~--~wvta~~~L-d~~t~l~aD-~~gNl~vlr~~~ 198 (199)
.... .+.+.++..++....-. . ..+ .-...+++- |.+++.++. ...++++.++.+
T Consensus 169 ~~~~-~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 169 WQTD-CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTSS-EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCC-eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 6543 56667877765422211 1 111 244666665 344555554 667788887643
No 191
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=62.92 E-value=75 Score=29.56 Aligned_cols=57 Identities=12% Similarity=0.069 Sum_probs=31.6
Q ss_pred CcceEEccccCeEEEEeCCEEEEEEcCCccee-eeeeccCcCceEEEE--EEeCCEEEEEe
Q psy17021 85 EVPYAMCPFQGALLVGVGRYLRLYDLGKKKLL-RKCENKHLPNLIVKI--ESMGHRIYVSD 142 (199)
Q Consensus 85 G~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll-~~~~~~~~~~~i~~l--~~~~~~IlVGD 142 (199)
..|.++.--.+.|++|..++|++|++...++. .+-.+. ...+.+.+ ...+..+++++
T Consensus 227 ~~V~svaFsg~~LASa~~~tIkLWd~~~~~~~~~~~gh~-~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 227 RKITDLKIVDYKVVLTCPGYVHKIDLKNYSISSLKTGSL-ENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp SCCCCEEEETTEEEEECSSEEEEEETTTTEEEEEECSCC-SCCCEEEETTCSSCEEEEECS
T ss_pred CcEEEEEEECCEEEEEeCCeEEEEECCCCeEEEEEcCCC-ceEEEEEeeeCCCCCEEEEEc
Confidence 45555443234677777899999999877652 221222 12233344 32334666666
No 192
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=62.44 E-value=65 Score=26.53 Aligned_cols=95 Identities=13% Similarity=0.107 Sum_probs=61.9
Q ss_pred CeEEEEeC----CEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeE-EEEeccCCce
Q psy17021 95 GALLVGVG----RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQL-LIFADDTQPR 169 (199)
Q Consensus 95 g~LLaavg----~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l-~~varD~~~~ 169 (199)
|+|.++-| ++|++++....+.++..... .......+...++++++++-..+. +..|+.+..+. ..+.-.....
T Consensus 32 g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~-~~~fgeGi~~~g~~lyv~t~~~~~-v~viD~~t~~v~~~i~~g~~~g 109 (266)
T 2iwa_A 32 DTLFESTGLYGRSSVRQVALQTGKVENIHKMD-DSYFGEGLTLLNEKLYQVVWLKNI-GFIYDRRTLSNIKNFTHQMKDG 109 (266)
T ss_dssp TEEEEEECSTTTCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEETTCSE-EEEEETTTTEEEEEEECCSSSC
T ss_pred CeEEEECCCCCCCEEEEEECCCCCEEEEEecC-CCcceEEEEEeCCEEEEEEecCCE-EEEEECCCCcEEEEEECCCCCe
Confidence 68888764 79999999888877765543 233466777779999999987776 55578765433 3333221223
Q ss_pred eEEEEEEEeCCeEEEEcCCCcEEEE
Q psy17021 170 WITTSCVLDYNTVASADKFGNVCIV 194 (199)
Q Consensus 170 wvta~~~Ld~~t~l~aD~~gNl~vl 194 (199)
|-.+ . |...++++|..+.++++
T Consensus 110 ~glt--~-Dg~~l~vs~gs~~l~vi 131 (266)
T 2iwa_A 110 WGLA--T-DGKILYGSDGTSILYEI 131 (266)
T ss_dssp CEEE--E-CSSSEEEECSSSEEEEE
T ss_pred EEEE--E-CCCEEEEECCCCeEEEE
Confidence 4322 2 66778888876655554
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=62.17 E-value=54 Score=25.53 Aligned_cols=84 Identities=10% Similarity=0.029 Sum_probs=45.0
Q ss_pred eCCEEEEEEcCCcceeeeeec--cCcCceEEEEEEe-C-CEEEEEeccccEEEEEEeCCCCeEEEE-eccCC---ceeEE
Q psy17021 101 VGRYLRLYDLGKKKLLRKCEN--KHLPNLIVKIESM-G-HRIYVSDVQESVFLVRYKRYENQLLIF-ADDTQ---PRWIT 172 (199)
Q Consensus 101 vg~~v~vy~l~~~~Ll~~~~~--~~~~~~i~~l~~~-~-~~IlVGD~~~Sv~ll~y~~~~~~l~~v-arD~~---~~wvt 172 (199)
-++.|..|+....++.....- ......+..+... + +.+++++... .+.+|+.+ +++..+ ..... ...+.
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~--~l~~~d~~-g~~~~~~~~~~~~~~~~~~~ 120 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL--GLLVVQTD-GTFEEIAKKDSEGRRMQGCN 120 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--EEEEEETT-SCEEECCSBCTTSCBCBCCC
T ss_pred CCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC--CEEEEeCC-CCEEEEEeccCCCccccCCc
Confidence 357788888765554322210 0011236666654 3 5889998766 46678877 777665 43221 12344
Q ss_pred EEEEEeCCeEEEEcC
Q psy17021 173 TSCVLDYNTVASADK 187 (199)
Q Consensus 173 a~~~Ld~~t~l~aD~ 187 (199)
++.+-.++.+..++.
T Consensus 121 ~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 121 DCAFDYEGNLWITAP 135 (314)
T ss_dssp EEEECTTSCEEEEEC
T ss_pred CEEECCCCCEEEEec
Confidence 554433345555554
No 194
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=61.82 E-value=33 Score=28.12 Aligned_cols=51 Identities=16% Similarity=0.189 Sum_probs=36.6
Q ss_pred CEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcC
Q psy17021 136 HRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK 187 (199)
Q Consensus 136 ~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~ 187 (199)
..++|+|...+ .+.+|+++.+++..++.+..-.|.+++.+=.++++++++.
T Consensus 259 G~l~va~~~~~-~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 259 HNIYVGDLAHS-AIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp CCEEEEEGGGT-EEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred CCEEEEccCCC-eEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 46888888776 3678888557788888876667899998864555555544
No 195
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=60.03 E-value=81 Score=26.87 Aligned_cols=97 Identities=11% Similarity=0.020 Sum_probs=54.2
Q ss_pred EccccCeEEEEe---CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEec
Q psy17021 90 MCPFQGALLVGV---GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFAD 164 (199)
Q Consensus 90 L~~f~g~LLaav---g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var 164 (199)
+.|..|.|..+- +.+|...++........... ....+..|.. .++++++.|.... .+.+++.+......+..
T Consensus 209 vdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~--~l~~P~glavd~~~~~lY~aD~~~~-~I~~~d~dG~~~~~~~~ 285 (400)
T 3p5b_L 209 VDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSKLH-SISSIDVNGGNRKTILE 285 (400)
T ss_dssp EETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTSCCCEEEEE
T ss_pred EecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC--CCCceEEEEEEeCCCEEEEEECCCC-EEEEEeCCCCccEEEEe
Confidence 444566665554 24566666643321111111 1124556665 4789999998764 34555555544444444
Q ss_pred c-CCceeEEEEEEEeCCeEEEEcCCCc
Q psy17021 165 D-TQPRWITTSCVLDYNTVASADKFGN 190 (199)
Q Consensus 165 D-~~~~wvta~~~Ld~~t~l~aD~~gN 190 (199)
. ..-.+..++.. +++.+..+|...+
T Consensus 286 ~~~~l~~P~gl~v-~~~~lywtd~~~~ 311 (400)
T 3p5b_L 286 DEKRLAHPFSLAV-FEDKVFWTDIINE 311 (400)
T ss_dssp CSSTTSSEEEEEE-ETTEEEEEESSSC
T ss_pred CCCCCCCCEEEEE-eCCEEEEecCCCC
Confidence 3 33456667766 8888888886544
No 196
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=59.35 E-value=1.1e+02 Score=28.08 Aligned_cols=140 Identities=12% Similarity=0.076 Sum_probs=77.8
Q ss_pred ceee-cccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEe-------ecc-
Q psy17021 13 PYAM-CPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHK-------TSV- 83 (199)
Q Consensus 13 ~~~~-~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~-------~~~- 83 (199)
+.++ ..=+|+|.+|..+.|-.||.-..+.-. ... ..+..+. .+.. .++++.+|-.--...+ ..+
T Consensus 65 i~~i~~d~~g~lWigT~~Gl~~yd~~~~~f~~--~~~-~~~~~i~---~i~~-~~g~lWigt~~Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 65 IYCGVIIDNTYLYMGTDNGILVYNYRADRYEQ--PET-DFPTDVR---TMAL-QGDTLWLGALNGLYTYQLQSRKLTSFD 137 (758)
T ss_dssp EEEEEEETTTEEEEEETTEEEEEETTTTEECC--CSC-CCCSCEE---EEEE-ETTEEEEEETTEEEEEETTTCCEEEEC
T ss_pred EEEEEEcCCCcEEEEeCCCeEEEeCCCCEEEC--ccc-CCCceEE---EEEe-cCCcEEEEcCCcceeEeCCCCeEEEec
Confidence 3443 345789999999999999976554322 111 0222232 2222 3467766421111111 011
Q ss_pred -------CCcceEEccc-cCeEEEEeCCEEEEEEcCCcceeeeeecc---CcCceEEEEEEe--CCEEEEEeccccEEEE
Q psy17021 84 -------DEVPYAMCPF-QGALLVGVGRYLRLYDLGKKKLLRKCENK---HLPNLIVKIESM--GHRIYVSDVQESVFLV 150 (199)
Q Consensus 84 -------kG~v~aL~~f-~g~LLaavg~~v~vy~l~~~~Ll~~~~~~---~~~~~i~~l~~~--~~~IlVGD~~~Sv~ll 150 (199)
...++++..- +|.|.+|..+-|..|+...+++....... .....+.++... ++.|.||.- . -++
T Consensus 138 ~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~--Gl~ 214 (758)
T 3ott_A 138 TRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-G--YLF 214 (758)
T ss_dssp HHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-E--EEE
T ss_pred cCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-C--CCe
Confidence 2345666554 67898998888888887665542211100 012246677654 467888872 3 577
Q ss_pred EEeCCCCeEEEE
Q psy17021 151 RYKRYENQLLIF 162 (199)
Q Consensus 151 ~y~~~~~~l~~v 162 (199)
+|++..+++..+
T Consensus 215 ~~~~~~~~~~~~ 226 (758)
T 3ott_A 215 QYFPSTGQIKQT 226 (758)
T ss_dssp EEETTTTEEEEE
T ss_pred EEcCCCCeEEec
Confidence 888877776544
No 197
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=59.07 E-value=86 Score=26.86 Aligned_cols=110 Identities=11% Similarity=0.064 Sum_probs=66.0
Q ss_pred cCCcceEEccc-cCeEEE----Ee--CCEEEEEEcCCc-----c----eeeeeeccCcCceEEEEEEe---CCEEEEEec
Q psy17021 83 VDEVPYAMCPF-QGALLV----GV--GRYLRLYDLGKK-----K----LLRKCENKHLPNLIVKIESM---GHRIYVSDV 143 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~LLa----av--g~~v~vy~l~~~-----~----Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD~ 143 (199)
.+++++++.-- .|+.|| +. .++|++|++... + +........-...+.++.-. +++++.|..
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 45666665422 355555 22 568999998432 1 11111111112347777753 568888998
Q ss_pred cccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEe
Q psy17021 144 QESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVS 195 (199)
Q Consensus 144 ~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr 195 (199)
-..|.++..+.. +.. .........++++++- |...++.+..+|.+.++.
T Consensus 171 Dg~v~iwD~~~~--~~~-~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd 220 (434)
T 2oit_A 171 DGSIAVLQVTET--VKV-CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYL 220 (434)
T ss_dssp TSCEEEEEESSS--EEE-EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCeEEEEEcCCC--cce-eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEc
Confidence 889888876543 221 2222235578888887 555788888999998874
No 198
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=57.81 E-value=86 Score=26.47 Aligned_cols=161 Identities=10% Similarity=-0.038 Sum_probs=84.5
Q ss_pred CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEECCe-eeEEEeeccCCcc----------
Q psy17021 20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVGNA-MEFVHKTSVDEVP---------- 87 (199)
Q Consensus 20 ~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vgdk-lesVh~~~~kG~v---------- 87 (199)
.+.|+++-++.|+.+++...+.-.-. ........+... .++++|+.|. ...|+....+|..
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~-------~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~ 159 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLL-------NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE 159 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEE-------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS
T ss_pred cceeEeecCccceeeccCCCcEEEEe-------cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC
Confidence 67899999999999998653321111 111112222211 2456665432 2233333333321
Q ss_pred ----eEEccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEeccccEEEEEEeCCCCeE
Q psy17021 88 ----YAMCPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSDVQESVFLVRYKRYENQL 159 (199)
Q Consensus 88 ----~aL~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~Sv~ll~y~~~~~~l 159 (199)
.++.+..|.|..+- +++|.++++..+.. +..... ....+..|.+. +.++++.|....=.+.+++.+....
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~~-~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQ-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-EEEECS-SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-EEeecC-CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 23333445554443 34555555543221 111111 12235666654 7899999987756688888766544
Q ss_pred EEEeccCCceeEEEEEEE-eCCeEEEEcCCCc
Q psy17021 160 LIFADDTQPRWITTSCVL-DYNTVASADKFGN 190 (199)
Q Consensus 160 ~~varD~~~~wvta~~~L-d~~t~l~aD~~gN 190 (199)
..+..+ .-.|..++.+= +.+.+..+|...+
T Consensus 238 ~~~~~~-~~~~PnGlavd~~~~~lY~aD~~~~ 268 (386)
T 3v65_B 238 RIIADT-HLFWPNGLTIDYAGRRMYWVDAKHH 268 (386)
T ss_dssp EEEECS-SCSCEEEEEEEGGGTEEEEEETTTT
T ss_pred EEEEEC-CCCCeeeEEEeCCCCEEEEEECCCC
Confidence 444432 24577777764 4568888887665
No 199
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=57.77 E-value=69 Score=25.35 Aligned_cols=165 Identities=13% Similarity=0.054 Sum_probs=85.9
Q ss_pred eeecccCCEEEEeec-------CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEE-CC-----eeeEEEe
Q psy17021 14 YAMCPFQGALLVGVG-------RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV-GN-----AMEFVHK 80 (199)
Q Consensus 14 ~~~~~f~~~ll~~~~-------~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v-gd-----klesVh~ 80 (199)
++++.++++|.+-=| +.+-.||...++--+-. . +|..- ........ +++|++ |- .+..++.
T Consensus 55 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~--~p~~r-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~ 128 (302)
T 2xn4_A 55 AGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA--N--MRDRR-STLGAAVL-NGLLYAVGGFDGSTGLSSVEA 128 (302)
T ss_dssp CEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC--C--CSSCC-BSCEEEEE-TTEEEEEEEECSSCEEEEEEE
T ss_pred ceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCC--C--CCccc-cceEEEEE-CCEEEEEcCCCCCccCceEEE
Confidence 456677888876433 45888997654422111 1 22211 12222333 467754 21 2333333
Q ss_pred eccC-------------CcceEEccccCeEEEEe---------CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCE-
Q psy17021 81 TSVD-------------EVPYAMCPFQGALLVGV---------GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHR- 137 (199)
Q Consensus 81 ~~~k-------------G~v~aL~~f~g~LLaav---------g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~- 137 (199)
...+ ..-.+.+.++|+|.+.- -+.+..|+....+-....... .+..-.++.+.++.
T Consensus 129 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~i 207 (302)
T 2xn4_A 129 YNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMS-TRRSGAGVGVLNNLL 207 (302)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCS-SCCBSCEEEEETTEE
T ss_pred EeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCc-cccccccEEEECCEE
Confidence 3221 11223444566665532 234777777665432322222 22233344444554
Q ss_pred EEEEeccc---cEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEE
Q psy17021 138 IYVSDVQE---SVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASA 185 (199)
Q Consensus 138 IlVGD~~~---Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~a 185 (199)
+++|-.-. +-.+..|+++.++-..++.-..+|.-.++..+++.-|+.+
T Consensus 208 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~G 258 (302)
T 2xn4_A 208 YAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVG 258 (302)
T ss_dssp EEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEC
T ss_pred EEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEEC
Confidence 45554322 2357789999999999987777777666666666655544
No 200
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=57.47 E-value=52 Score=26.40 Aligned_cols=94 Identities=12% Similarity=-0.054 Sum_probs=54.6
Q ss_pred EccccCeEEEEeC----------CEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEE-EEEec----cccEEEEEEeC
Q psy17021 90 MCPFQGALLVGVG----------RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRI-YVSDV----QESVFLVRYKR 154 (199)
Q Consensus 90 L~~f~g~LLaavg----------~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~I-lVGD~----~~Sv~ll~y~~ 154 (199)
.+.++|+|.+.-| +.+.+|+....+-.+..... .+.+-.+..+.++.| ++|-. ...-.+..|++
T Consensus 94 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 172 (315)
T 4asc_A 94 LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP-YVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDP 172 (315)
T ss_dssp EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC-CcccceeEEEECCEEEEEeCCCCCCcccceEEEEeC
Confidence 4445566554433 34777777665433333322 223333344455544 56644 11235778899
Q ss_pred CCCeEEEEeccCCceeEEEEEEEeCCeEEE
Q psy17021 155 YENQLLIFADDTQPRWITTSCVLDYNTVAS 184 (199)
Q Consensus 155 ~~~~l~~varD~~~~wvta~~~Ld~~t~l~ 184 (199)
..++-..++.-..+|.-.++..+++.-|+.
T Consensus 173 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 202 (315)
T 4asc_A 173 KKFEWKELAPMQTARSLFGATVHDGRIIVA 202 (315)
T ss_dssp TTTEEEECCCCSSCCBSCEEEEETTEEEEE
T ss_pred CCCeEEECCCCCCchhceEEEEECCEEEEE
Confidence 999999998777788877777776664443
No 201
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=57.32 E-value=63 Score=25.92 Aligned_cols=80 Identities=13% Similarity=-0.010 Sum_probs=45.8
Q ss_pred EEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEE-EEEecc----ccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEe
Q psy17021 104 YLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRI-YVSDVQ----ESVFLVRYKRYENQLLIFADDTQPRWITTSCVLD 178 (199)
Q Consensus 104 ~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~I-lVGD~~----~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld 178 (199)
.+.+|+....+-.+.+... .+.+-.+..+.++.| ++|-.. ..-.+..|++..++-..++.-..+|.-.++..++
T Consensus 128 ~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 206 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLP-IKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHK 206 (318)
T ss_dssp EEEEEETTTTEEEEECCCS-SCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred eEEEEeCCCCCEeECCCCC-CcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEEC
Confidence 4667777655433332222 222323333455544 556331 1234778899999999998777778766666666
Q ss_pred CCeEEE
Q psy17021 179 YNTVAS 184 (199)
Q Consensus 179 ~~t~l~ 184 (199)
+.-|+.
T Consensus 207 ~~iyv~ 212 (318)
T 2woz_A 207 GKIVIA 212 (318)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 654433
No 202
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=56.68 E-value=85 Score=27.03 Aligned_cols=92 Identities=11% Similarity=0.030 Sum_probs=57.7
Q ss_pred CEEEEEEcC---Ccceeeeeecc----C-------cCceEEEEEEeC-CEEEEEeccc-cEEEEEEeCCCCeEEEEeccC
Q psy17021 103 RYLRLYDLG---KKKLLRKCENK----H-------LPNLIVKIESMG-HRIYVSDVQE-SVFLVRYKRYENQLLIFADDT 166 (199)
Q Consensus 103 ~~v~vy~l~---~~~Ll~~~~~~----~-------~~~~i~~l~~~~-~~IlVGD~~~-Sv~ll~y~~~~~~l~~varD~ 166 (199)
+.|..|++. ..+.+..+-.. . -...+..+.+.. ..++|.|... +. +++++++...+.....+.
T Consensus 100 ~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~-I~rV~pdG~~~~~~~~~~ 178 (334)
T 2p9w_A 100 SSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPA-IARVSADGKTVSTFAWES 178 (334)
T ss_dssp CEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCE-EEEECTTSCCEEEEEECC
T ss_pred CEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCe-EEEEeCCCCEEeeeeecC
Confidence 568889988 44443332211 0 112477777742 3567777766 44 889998877676665443
Q ss_pred Cc----eeEEEEEEE-eCCeEEEEcCCCcEEEEe
Q psy17021 167 QP----RWITTSCVL-DYNTVASADKFGNVCIVS 195 (199)
Q Consensus 167 ~~----~wvta~~~L-d~~t~l~aD~~gNl~vlr 195 (199)
.+ .-.+.+.+. |..+++++|..|.|+.|-
T Consensus 179 ~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 179 GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 21 114577777 566999999988888764
No 203
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=56.28 E-value=75 Score=25.36 Aligned_cols=155 Identities=10% Similarity=0.005 Sum_probs=80.7
Q ss_pred eeecccCCEEEEeec-------CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEE-CCe-----eeEEEe
Q psy17021 14 YAMCPFQGALLVGVG-------RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV-GNA-----MEFVHK 80 (199)
Q Consensus 14 ~~~~~f~~~ll~~~~-------~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v-gdk-----lesVh~ 80 (199)
++++.++|+|.+-=| +.+-.||+...+--+-. . +|... ........ +++|++ |.. +..+..
T Consensus 115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~--~p~~r-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~ 188 (308)
T 1zgk_A 115 IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA--P--MLTRR-IGVGVAVL-NRLLYAVGGFDGTNRLNSAEC 188 (308)
T ss_dssp CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECC--C--CSSCC-BSCEEEEE-TTEEEEECCBCSSCBCCCEEE
T ss_pred cEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECC--C--CCccc-cceEEEEE-CCEEEEEeCCCCCCcCceEEE
Confidence 566777888876433 56889998664432211 1 22211 12222333 467754 311 222322
Q ss_pred ecc-------------CCcceEEccccCeEEEEeC-------CEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEE-E
Q psy17021 81 TSV-------------DEVPYAMCPFQGALLVGVG-------RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRI-Y 139 (199)
Q Consensus 81 ~~~-------------kG~v~aL~~f~g~LLaavg-------~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~I-l 139 (199)
... ...-.+.+.++|+|++.-| +.+.+|+....+-....... .+..-.++.+.++.| +
T Consensus 189 yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~i~v 267 (308)
T 1zgk_A 189 YYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMK-HRRSALGITVHQGRIYV 267 (308)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEEETTEEEE
T ss_pred EeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCC-CCccceEEEEECCEEEE
Confidence 221 1222344556777655433 56888888766533332222 222333344445544 5
Q ss_pred EEecc---ccEEEEEEeCCCCeEEEEeccCCceeEEEEE
Q psy17021 140 VSDVQ---ESVFLVRYKRYENQLLIFADDTQPRWITTSC 175 (199)
Q Consensus 140 VGD~~---~Sv~ll~y~~~~~~l~~varD~~~~wvta~~ 175 (199)
+|-.- ..-.+..|+++.++-.+++.-..+|.-.++.
T Consensus 268 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 306 (308)
T 1zgk_A 268 LGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVA 306 (308)
T ss_dssp ECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEE
T ss_pred EcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccceeE
Confidence 55422 2345778899999998888777777654443
No 204
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=55.98 E-value=82 Score=25.68 Aligned_cols=104 Identities=7% Similarity=-0.035 Sum_probs=59.7
Q ss_pred cCe-EEEEe--CCEEEEEEcC-CcceeeeeeccC-c-CceEEEEEE--eCCEEEEEecc-ccEEEEEEeCCCCeEEE---
Q psy17021 94 QGA-LLVGV--GRYLRLYDLG-KKKLLRKCENKH-L-PNLIVKIES--MGHRIYVSDVQ-ESVFLVRYKRYENQLLI--- 161 (199)
Q Consensus 94 ~g~-LLaav--g~~v~vy~l~-~~~Ll~~~~~~~-~-~~~i~~l~~--~~~~IlVGD~~-~Sv~ll~y~~~~~~l~~--- 161 (199)
+|+ |+++- .++|++|++. ..++........ . ...+..+.. .|.++++++-. ..+.++.++.+.+++..
T Consensus 155 dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~ 234 (365)
T 1jof_A 155 TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHH 234 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccc
Confidence 355 54442 4789999997 555543333220 1 223555554 46688888765 47888888865565532
Q ss_pred -Eecc---CC-ce-------eEEEEEEEeCC--eEEEEcCCC------cEEEEeec
Q psy17021 162 -FADD---TQ-PR-------WITTSCVLDYN--TVASADKFG------NVCIVSTY 197 (199)
Q Consensus 162 -varD---~~-~~-------wvta~~~Ld~~--t~l~aD~~g------Nl~vlr~~ 197 (199)
+..- +. .. ++.++.+++.| .+.+++... ++.++.++
T Consensus 235 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 235 SFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred eEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 3221 11 12 68888845443 556666544 58888764
No 205
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=55.39 E-value=94 Score=26.20 Aligned_cols=101 Identities=12% Similarity=0.035 Sum_probs=56.9
Q ss_pred ccccCeEEEEe-C--CEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEecc
Q psy17021 91 CPFQGALLVGV-G--RYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADD 165 (199)
Q Consensus 91 ~~f~g~LLaav-g--~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD 165 (199)
.|-.|.|..+- + .+|..++............ ....+..|.. .++++++.|.... .+.+++.+......+..+
T Consensus 210 dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~--~~~~PnGlavd~~~~~lY~aD~~~~-~I~~~d~dG~~~~~~~~~ 286 (386)
T 3v65_B 210 HPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT--HLFWPNGLTIDYAGRRMYWVDAKHH-VIERANLDGSHRKAVISQ 286 (386)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS--SCSCEEEEEEEGGGTEEEEEETTTT-EEEEECTTSCSCEEEECS
T ss_pred EcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC--CCCCeeeEEEeCCCCEEEEEECCCC-EEEEEeCCCCeeEEEEEC
Confidence 34456665543 2 4566666643322111111 1223556665 5889999998876 466666554433333332
Q ss_pred CCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 166 TQPRWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 166 ~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
. ..+..++.+ +++.+..+|...+ .|.+++
T Consensus 287 ~-~~~P~giav-~~~~ly~td~~~~-~V~~~~ 315 (386)
T 3v65_B 287 G-LPHPFAITV-FEDSLYWTDWHTK-SINSAN 315 (386)
T ss_dssp S-CSSEEEEEE-ETTEEEEEETTTT-EEEEEE
T ss_pred C-CCCceEEEE-ECCEEEEeeCCCC-eEEEEE
Confidence 2 346777777 8889999997665 344443
No 206
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=54.92 E-value=1.3e+02 Score=27.65 Aligned_cols=149 Identities=13% Similarity=0.211 Sum_probs=80.1
Q ss_pred Ccceeecc-cCCEEEEeec-CeeEEEecchhhhhhhhh-------h---cccccCceeeeeEEEEEcCceeEECCe---e
Q psy17021 11 EVPYAMCP-FQGALLVGVG-RYLRLYDLGKKKLLRKCE-------N---KVRIKGFRKAHQTHTHSGRSDRLVGNA---M 75 (199)
Q Consensus 11 ~~~~~~~~-f~~~ll~~~~-~~l~~y~~g~k~ll~k~~-------~---~~~~~~~~~~~~~~~~~~~~ri~vgdk---l 75 (199)
..+.++.. -+|.|.+|.. +.|..||...+++-+-.. . ...++.. .+.++.....+++.+|-. +
T Consensus 258 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~--~v~~i~~D~~g~lWigt~~~Gl 335 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNA--SARYIFQDSFNNIWIGTWGGGI 335 (781)
T ss_dssp CCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSS--CEEEEEECSSCCEEEEEBSSCE
T ss_pred ceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCC--eEEEEEEeCCCCEEEEecCCeE
Confidence 34555554 5889999997 889999987655433211 0 0012221 244555544556665421 1
Q ss_pred eE--------EEeec----------cCCcceEEcccc-CeEEEEe-CCEEEEEEcCCcceeeeee-ccCcCceEEEEEEe
Q psy17021 76 EF--------VHKTS----------VDEVPYAMCPFQ-GALLVGV-GRYLRLYDLGKKKLLRKCE-NKHLPNLIVKIESM 134 (199)
Q Consensus 76 es--------Vh~~~----------~kG~v~aL~~f~-g~LLaav-g~~v~vy~l~~~~Ll~~~~-~~~~~~~i~~l~~~ 134 (199)
.. .++.. -...|++++.-. |.|-+|. ++-|..|+....+...-.. .......|.++...
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d 415 (781)
T 3v9f_A 336 NFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKD 415 (781)
T ss_dssp EEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEEC
T ss_pred EEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEEC
Confidence 11 11110 124577777664 7898888 7778888886544322100 01122357777764
Q ss_pred -CCEEEEEeccccEEEEEEeCCCCeEEEEe
Q psy17021 135 -GHRIYVSDVQESVFLVRYKRYENQLLIFA 163 (199)
Q Consensus 135 -~~~IlVGD~~~Sv~ll~y~~~~~~l~~va 163 (199)
++.+.+|-...+ +.+|++..+++..+.
T Consensus 416 ~~g~lWigt~~~G--l~~~~~~~~~~~~~~ 443 (781)
T 3v9f_A 416 SEGNLWFGTYLGN--ISYYNTRLKKFQIIE 443 (781)
T ss_dssp TTSCEEEEETTEE--EEEECSSSCEEEECC
T ss_pred CCCCEEEEeccCC--EEEEcCCCCcEEEec
Confidence 667888876555 456666666665543
No 207
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=53.84 E-value=85 Score=25.25 Aligned_cols=104 Identities=11% Similarity=0.067 Sum_probs=54.0
Q ss_pred cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEecc------ccEEEEEEeCCCCeEEEEec-
Q psy17021 94 QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQ------ESVFLVRYKRYENQLLIFAD- 164 (199)
Q Consensus 94 ~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~------~Sv~ll~y~~~~~~l~~var- 164 (199)
.|.|+++- +++|++|+....++++..........+..+......+++.|-. .+..+..|+...+++...-.
T Consensus 207 ~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~ 286 (329)
T 3fvz_A 207 LDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP 286 (329)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC
Confidence 37787775 6789999997555544432211112233333333444433321 12345556655555544421
Q ss_pred -cCCceeEEEEEEEeCCeEEEEcCC-CcEEEEeec
Q psy17021 165 -DTQPRWITTSCVLDYNTVASADKF-GNVCIVSTY 197 (199)
Q Consensus 165 -D~~~~wvta~~~Ld~~t~l~aD~~-gNl~vlr~~ 197 (199)
.....+..++.+=.+..++++|.. +.|.++...
T Consensus 287 ~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 287 VRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp SSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred CCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 233456777776444477777764 456666543
No 208
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=52.44 E-value=85 Score=24.79 Aligned_cols=96 Identities=15% Similarity=0.106 Sum_probs=55.0
Q ss_pred EEccccCeEEEEeC-------CEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEE-EEEeccc-----cEEEEEEeCC
Q psy17021 89 AMCPFQGALLVGVG-------RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRI-YVSDVQE-----SVFLVRYKRY 155 (199)
Q Consensus 89 aL~~f~g~LLaavg-------~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~I-lVGD~~~-----Sv~ll~y~~~ 155 (199)
+.+.++|++.+.-| +.+.+|+....+-....... .+..-....+.++.| ++|-.-. .-.+..|++.
T Consensus 103 ~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~ 181 (302)
T 2xn4_A 103 GAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMN-TRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNAT 181 (302)
T ss_dssp EEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCS-SCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETT
T ss_pred EEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCC-CcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCC
Confidence 44455676654332 45777877665533333332 233333444456655 4443211 2246788999
Q ss_pred CCeEEEEeccCCceeEEEEEEEeCCeEEEE
Q psy17021 156 ENQLLIFADDTQPRWITTSCVLDYNTVASA 185 (199)
Q Consensus 156 ~~~l~~varD~~~~wvta~~~Ld~~t~l~a 185 (199)
.++-..++.-..+|.-.++..+++.-|+.+
T Consensus 182 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 211 (302)
T 2xn4_A 182 TNEWTYIAEMSTRRSGAGVGVLNNLLYAVG 211 (302)
T ss_dssp TTEEEEECCCSSCCBSCEEEEETTEEEEEC
T ss_pred CCcEEECCCCccccccccEEEECCEEEEEC
Confidence 999999887777777767767666654443
No 209
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=52.36 E-value=1e+02 Score=25.62 Aligned_cols=61 Identities=11% Similarity=0.007 Sum_probs=40.9
Q ss_pred eEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCc
Q psy17021 127 LIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190 (199)
Q Consensus 127 ~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gN 190 (199)
.+..|.. .++++++.|.... .+.+++.+......+.... ..+..++.+ +++.+..+|...+
T Consensus 204 ~PnGla~d~~~~~lY~aD~~~~-~I~~~~~dG~~~~~~~~~~-~~~P~giav-~~~~ly~td~~~~ 266 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAKHH-VIERANLDGSHRKAVISQG-LPHPFAITV-FEDSLYWTDWHTK 266 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEECSS-CSSEEEEEE-ETTEEEEEETTTT
T ss_pred CcceEEEeCCCCEEEEEECCCC-EEEEEeCCCCceEEEEeCC-CCCceEEEE-ECCEEEEecCCCC
Confidence 3566665 4789999998775 4566665544333333322 457777777 8889999997665
No 210
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=51.73 E-value=1.4e+02 Score=27.02 Aligned_cols=97 Identities=11% Similarity=0.037 Sum_probs=54.0
Q ss_pred cccCeEEEEeCC-------------EEEEEEcCCcceeeee--eccCcCceEEEEEE--eCCEEEEEeccc---------
Q psy17021 92 PFQGALLVGVGR-------------YLRLYDLGKKKLLRKC--ENKHLPNLIVKIES--MGHRIYVSDVQE--------- 145 (199)
Q Consensus 92 ~f~g~LLaavg~-------------~v~vy~l~~~~Ll~~~--~~~~~~~~i~~l~~--~~~~IlVGD~~~--------- 145 (199)
..+|+|++.=|. .+.+|+....+-.... ... .+..-.+..+ .+..+++|-.-.
T Consensus 408 ~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp-~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~ 486 (656)
T 1k3i_A 408 AVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY-FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTP 486 (656)
T ss_dssp TTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS-SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSB
T ss_pred CCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC-CCcccCCeEECCCCCEEEECCcccCcCcCCCCc
Confidence 457887765442 5667776554422222 111 1222222222 355666774322
Q ss_pred cEEEEEEeCCCCeEEEEeccCCceeEEEEEEE--eCCe-EEEEcCCC
Q psy17021 146 SVFLVRYKRYENQLLIFADDTQPRWITTSCVL--DYNT-VASADKFG 189 (199)
Q Consensus 146 Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L--d~~t-~l~aD~~g 189 (199)
.-.+..|+++.++...++.-..+|.-.++..+ |..- +.|++..+
T Consensus 487 ~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~ 533 (656)
T 1k3i_A 487 VFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCG 533 (656)
T ss_dssp CCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCT
T ss_pred ccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCCCCC
Confidence 24567889999999998877777776555555 5554 44454443
No 211
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=50.75 E-value=1.1e+02 Score=25.40 Aligned_cols=180 Identities=12% Similarity=0.058 Sum_probs=90.6
Q ss_pred EEecCCCcceeecc-----cC-CEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCcee--EECCeee
Q psy17021 5 HKTSVDEVPYAMCP-----FQ-GALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDR--LVGNAME 76 (199)
Q Consensus 5 h~t~~~~~~~~~~~-----f~-~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri--~vgdkle 76 (199)
|.=+++..|+++.. -. ..+.+|-.+.+++|+...+...-.. ......+.....+ .+. .......
T Consensus 10 ~~lpl~~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~ 81 (393)
T 4gq1_A 10 YQLPLNVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGST-------GLTLQELFTIQTG-LPTLHLSFSSSC 81 (393)
T ss_dssp EECCTTCCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCC-------SEEEEEEEEEECS-SCEEEEEECTTC
T ss_pred eEecCCCCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCccccc-------ccceeeeEEEecC-CCeeeEeecCCc
Confidence 56678888887643 12 3456677789999987653321100 1100011111111 111 1111111
Q ss_pred EEEeeccCCcceE-EccccCeEEEE--eCCEEEEEEcCCcceeee---eeccCcC-ceEEEEEE----------eCCEEE
Q psy17021 77 FVHKTSVDEVPYA-MCPFQGALLVG--VGRYLRLYDLGKKKLLRK---CENKHLP-NLIVKIES----------MGHRIY 139 (199)
Q Consensus 77 sVh~~~~kG~v~a-L~~f~g~LLaa--vg~~v~vy~l~~~~Ll~~---~~~~~~~-~~i~~l~~----------~~~~Il 139 (199)
........+.... ..+..+.+||+ ..++|++|+....+.... .... .| ..|.++.- .+.+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~-gH~~~v~~v~~~p~~~~~~~~d~~~la 160 (393)
T 4gq1_A 82 SYSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKS-GHHNFVNDIDIADVYSADNRLAEQVIA 160 (393)
T ss_dssp EEECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTT-SCSSCEEEEEEEEEECTTCSEEEEEEE
T ss_pred cccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccC-CCCCceEEEEEccccccccCCCCCEEE
Confidence 1111222222222 12334455543 368999999976654332 1222 22 24666664 356777
Q ss_pred EEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeC--CeEEEEcCCCcEEEEee
Q psy17021 140 VSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY--NTVASADKFGNVCIVST 196 (199)
Q Consensus 140 VGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~--~t~l~aD~~gNl~vlr~ 196 (199)
-|-.=+.|.+........ ...+-. ...+++++++-.+ ..++.+..++.+.++.+
T Consensus 161 s~s~D~tv~~Wd~~~~~~-~~~~~~--~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~ 216 (393)
T 4gq1_A 161 SVGDDCTLIIWRLTDEGP-ILAGYP--LSSPGISVQFRPSNPNQLIVGERNGNIRIFDW 216 (393)
T ss_dssp EEETTSEEEEEEEETTEE-EEEEEE--CSSCEEEEEEETTEEEEEEEEETTSEEEEEET
T ss_pred EEECCCeEEEEECCCCce-eeeecC--CCCCcEEEEECCCCCceEEecCCCCEEEEEEC
Confidence 777777888877654332 222222 2346788888733 35888899999888743
No 212
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=50.62 E-value=1e+02 Score=25.31 Aligned_cols=101 Identities=7% Similarity=-0.030 Sum_probs=56.7
Q ss_pred EccccCeEEEEe---CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEec
Q psy17021 90 MCPFQGALLVGV---GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFAD 164 (199)
Q Consensus 90 L~~f~g~LLaav---g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var 164 (199)
+.|-.|.|..+- +.+|..+++............ -.....|.. .++++++.|.... .+.+++.+......+..
T Consensus 129 vdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~--l~~Pnglavd~~~~~lY~aD~~~~-~I~~~d~dG~~~~~~~~ 205 (318)
T 3sov_A 129 LDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE--IYWPNGLTLDYEEQKLYWADAKLN-FIHKSNLDGTNRQAVVK 205 (318)
T ss_dssp EEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS--CSCEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEEC
T ss_pred EeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC--CCCccEEEEeccCCEEEEEECCCC-EEEEEcCCCCceEEEec
Confidence 344567776665 356766666433211111111 123556665 4789999998765 35556655444444443
Q ss_pred cCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021 165 DTQPRWITTSCVLDYNTVASADKFGNVCIVST 196 (199)
Q Consensus 165 D~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~ 196 (199)
. .-.+..++.+ |++.+..+|...+ .+.++
T Consensus 206 ~-~~~~P~glav-~~~~lywtd~~~~-~V~~~ 234 (318)
T 3sov_A 206 G-SLPHPFALTL-FEDILYWTDWSTH-SILAC 234 (318)
T ss_dssp S-CCSCEEEEEE-ETTEEEEEETTTT-EEEEE
T ss_pred C-CCCCceEEEE-eCCEEEEEecCCC-eEEEE
Confidence 2 2345566665 7888888887655 33343
No 213
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=49.36 E-value=95 Score=24.47 Aligned_cols=92 Identities=14% Similarity=0.062 Sum_probs=50.0
Q ss_pred cCeEEE-Ee-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccc---cEEEEEEeCCCCeEEEE-eccC
Q psy17021 94 QGALLV-GV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQE---SVFLVRYKRYENQLLIF-ADDT 166 (199)
Q Consensus 94 ~g~LLa-av-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~---Sv~ll~y~~~~~~l~~v-arD~ 166 (199)
+|+|++ +. ++.|.+|+....++...... ....+.++... ++.+++++... .-.+.+|+.+.+.+..+ ....
T Consensus 55 ~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 132 (333)
T 2dg1_A 55 QGQLFLLDVFEGNIFKINPETKEIKRPFVS--HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS 132 (333)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEEC--SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS
T ss_pred CCCEEEEECCCCEEEEEeCCCCcEEEEeeC--CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc
Confidence 466664 44 57898898876654332211 22346667653 44577777654 12466777777666533 2222
Q ss_pred CceeEEEEEEEeCCeEEEEcC
Q psy17021 167 QPRWITTSCVLDYNTVASADK 187 (199)
Q Consensus 167 ~~~wvta~~~Ld~~t~l~aD~ 187 (199)
...++.++.+-.+..+..++.
T Consensus 133 ~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 133 TAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEEC
T ss_pred cCCcccceEECCCCCEEEEec
Confidence 334555555543445555554
No 214
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=48.26 E-value=95 Score=24.16 Aligned_cols=96 Identities=15% Similarity=0.081 Sum_probs=47.9
Q ss_pred cCeEEEEe--CCEEEEEEcC-Ccce-eeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEEEEeCCCCeEEEEeccCCc
Q psy17021 94 QGALLVGV--GRYLRLYDLG-KKKL-LRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQP 168 (199)
Q Consensus 94 ~g~LLaav--g~~v~vy~l~-~~~L-l~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~ 168 (199)
+|+++++- +++|.+|++. ..++ .....+......+..+... +..+.|++ -. .+.+|+++...+..+.....
T Consensus 182 dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~--~v~~~~~~g~~~~~~~~~~~- 257 (296)
T 3e5z_A 182 SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GD--GVHVLTPDGDELGRVLTPQT- 257 (296)
T ss_dssp TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TT--EEEEECTTSCEEEEEECSSC-
T ss_pred CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CC--eEEEECCCCCEEEEEECCCC-
Confidence 35554443 4789999986 3333 1111111011223334432 33477777 33 46778887655555543322
Q ss_pred eeEEEEEEEe-C-CeEEEEcCCCcEEEEee
Q psy17021 169 RWITTSCVLD-Y-NTVASADKFGNVCIVST 196 (199)
Q Consensus 169 ~wvta~~~Ld-~-~t~l~aD~~gNl~vlr~ 196 (199)
++++.|-. + +++.++.. +.++-++.
T Consensus 258 --~~~~~f~~~d~~~L~v~t~-~~l~~~~~ 284 (296)
T 3e5z_A 258 --TSNLCFGGPEGRTLYMTVS-TEFWSIET 284 (296)
T ss_dssp --CCEEEEESTTSCEEEEEET-TEEEEEEC
T ss_pred --ceeEEEECCCCCEEEEEcC-CeEEEEEc
Confidence 67777742 2 35555544 35555543
No 215
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=47.38 E-value=1.4e+02 Score=25.79 Aligned_cols=172 Identities=13% Similarity=0.053 Sum_probs=83.5
Q ss_pred cceeeccc----CCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-----eeEEEee
Q psy17021 12 VPYAMCPF----QGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-----MEFVHKT 81 (199)
Q Consensus 12 ~~~~~~~f----~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-----lesVh~~ 81 (199)
.|..++-- .|+|.+.=. +.++.+|+...++-.-.. ....|. .+.....+++++.|. ...+...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~------giavd~dG~lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCA------DVNFTLNGDMVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEE------EEEECTTCCEEEEECCSCTTSEEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCcc------EEEECCCCCEEEEcCCCCcccceEEEE
Confidence 46666544 488888754 889999984433322221 111122 112222234766553 1212222
Q ss_pred ccCC------------cc--eEEccccCeEEEEe--CCEEEEEEcCCcce-eeeeeccCcC-ceEEEEEEeCCEEEEEec
Q psy17021 82 SVDE------------VP--YAMCPFQGALLVGV--GRYLRLYDLGKKKL-LRKCENKHLP-NLIVKIESMGHRIYVSDV 143 (199)
Q Consensus 82 ~~kG------------~v--~aL~~f~g~LLaav--g~~v~vy~l~~~~L-l~~~~~~~~~-~~i~~l~~~~~~IlVGD~ 143 (199)
.-++ .+ .++.+-.|.|.++- +++|+.|+....++ .........+ .+-..++..+++++|.|.
T Consensus 213 ~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 213 TRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp CGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred ECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 1111 11 23444467787665 45677777653333 1111111111 122344445788999998
Q ss_pred cc-cEEEEEEeCCCCeE---EEEeccC-------------CceeEEEEEEE--------e-CCeEEEEcCCCc
Q psy17021 144 QE-SVFLVRYKRYENQL---LIFADDT-------------QPRWITTSCVL--------D-YNTVASADKFGN 190 (199)
Q Consensus 144 ~~-Sv~ll~y~~~~~~l---~~varD~-------------~~~wvta~~~L--------d-~~t~l~aD~~gN 190 (199)
.. .|..+.++...+.+ ..++... .-.|...+.+. | +..+.++|...|
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~ 365 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSH 365 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTT
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCC
Confidence 76 45555555434433 2333321 22356667774 2 336778887654
No 216
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=46.57 E-value=1.1e+02 Score=24.24 Aligned_cols=165 Identities=10% Similarity=0.033 Sum_probs=87.7
Q ss_pred eeecccCCEEEEeec------CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEE-CCe------eeEEEe
Q psy17021 14 YAMCPFQGALLVGVG------RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV-GNA------MEFVHK 80 (199)
Q Consensus 14 ~~~~~f~~~ll~~~~------~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v-gdk------lesVh~ 80 (199)
++++.++|+|.+-=| +.+-.||+..++--+-. . +|. .......... +++|++ |-. +..+..
T Consensus 49 ~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~--~--~p~-~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 122 (306)
T 3ii7_A 49 AACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL--G--PPT-PRDSLAACAA-EGKIYTSGGSEVGNSALYLFEC 122 (306)
T ss_dssp CEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEE--C--CSS-CCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEE
T ss_pred eEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECC--C--CCc-cccceeEEEE-CCEEEEECCCCCCCcEeeeEEE
Confidence 456677888866544 67889998765432211 1 222 1112233333 467754 311 122322
Q ss_pred eccC-------------CcceEEccccCeEEEEe-----------CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCC
Q psy17021 81 TSVD-------------EVPYAMCPFQGALLVGV-----------GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH 136 (199)
Q Consensus 81 ~~~k-------------G~v~aL~~f~g~LLaav-----------g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~ 136 (199)
.... -.-.+.+.++|+|.+.- -+.+.+|+....+-.+..... .+..-..+.+.++
T Consensus 123 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~ 201 (306)
T 3ii7_A 123 YDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMI-EARKNHGLVFVKD 201 (306)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCS-SCCBSCEEEEETT
T ss_pred EeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCcc-chhhcceEEEECC
Confidence 2111 11223444566665433 244677777665433333222 2233334444465
Q ss_pred EE-EEEeccc---cEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEE
Q psy17021 137 RI-YVSDVQE---SVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASA 185 (199)
Q Consensus 137 ~I-lVGD~~~---Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~a 185 (199)
.| ++|-... +-.+..|+++.++-.+++.-..+|.-.++..+++.-++.+
T Consensus 202 ~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~G 254 (306)
T 3ii7_A 202 KIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLA 254 (306)
T ss_dssp EEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEE
T ss_pred EEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEe
Confidence 44 5554322 2346788999999999988777888777777766655444
No 217
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=46.05 E-value=1.1e+02 Score=24.31 Aligned_cols=96 Identities=9% Similarity=-0.064 Sum_probs=54.3
Q ss_pred EEccccCeEEEEeC-------CEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEE-EEEeccc---cEEEEEEeCCCC
Q psy17021 89 AMCPFQGALLVGVG-------RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRI-YVSDVQE---SVFLVRYKRYEN 157 (199)
Q Consensus 89 aL~~f~g~LLaavg-------~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~I-lVGD~~~---Sv~ll~y~~~~~ 157 (199)
+.+.++|+|.+.-| +.+..|+....+-....... .+..-.+..+.++.| ++|-.-. .-.+..|+++.+
T Consensus 163 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 163 GVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMN-TIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCC-CccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 34445666654422 45777777655432222222 222323334445544 5553321 345778899999
Q ss_pred eEEEEeccCCceeEEEEEEEeCCeEEEE
Q psy17021 158 QLLIFADDTQPRWITTSCVLDYNTVASA 185 (199)
Q Consensus 158 ~l~~varD~~~~wvta~~~Ld~~t~l~a 185 (199)
+-.++..-..+|.-.++..+++.-++.+
T Consensus 242 ~W~~~~~~p~~r~~~~~~~~~~~i~v~G 269 (308)
T 1zgk_A 242 TWTFVAPMKHRRSALGITVHQGRIYVLG 269 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEEC
T ss_pred cEEECCCCCCCccceEEEEECCEEEEEc
Confidence 9999887777777666667766654443
No 218
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=45.61 E-value=1.1e+02 Score=23.90 Aligned_cols=17 Identities=6% Similarity=0.038 Sum_probs=11.7
Q ss_pred EEEeec-CeeEEEecchh
Q psy17021 23 LLVGVG-RYLRLYDLGKK 39 (199)
Q Consensus 23 ll~~~~-~~l~~y~~g~k 39 (199)
+.++.. +.|..||...+
T Consensus 43 ~~~~~~~~~i~~~~~~~~ 60 (296)
T 3e5z_A 43 IFSDVRQNRTWAWSDDGQ 60 (296)
T ss_dssp EEEEGGGTEEEEEETTSC
T ss_pred EEEeCCCCEEEEEECCCC
Confidence 455654 77999997654
No 219
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=44.67 E-value=1.1e+02 Score=27.00 Aligned_cols=91 Identities=14% Similarity=0.062 Sum_probs=50.3
Q ss_pred CEEEEEEcC-Cc---ceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEecc----CCcee--
Q psy17021 103 RYLRLYDLG-KK---KLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADD----TQPRW-- 170 (199)
Q Consensus 103 ~~v~vy~l~-~~---~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD----~~~~w-- 170 (199)
+.|++|++. .. +..+..... ...+.++.- .|.+++++|.-....+..++.+.++...+... ..|.|
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~--~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~ 294 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGP--EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTP 294 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEET--TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCST
T ss_pred cEEEEEEECCCCcccccEEeCCCC--CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccc
Confidence 479999997 34 333322211 123444443 45677888876667888888766666555432 23445
Q ss_pred -EEEEEEEeCC-eEEEEcCCCcEEEEee
Q psy17021 171 -ITTSCVLDYN-TVASADKFGNVCIVST 196 (199)
Q Consensus 171 -vta~~~Ld~~-t~l~aD~~gNl~vlr~ 196 (199)
+.++.+.+++ .++.+.. +...++.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 295 GMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp TCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred cCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 3456666444 4444444 55544443
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=42.72 E-value=1.3e+02 Score=24.20 Aligned_cols=111 Identities=14% Similarity=0.058 Sum_probs=63.8
Q ss_pred cCCcceEEccc-cCeEEEEeCCEEEEEEcCCcceeeeeeccC-c-CceEEEEEEe-CCEEEEEecc-----ccEEEEEEe
Q psy17021 83 VDEVPYAMCPF-QGALLVGVGRYLRLYDLGKKKLLRKCENKH-L-PNLIVKIESM-GHRIYVSDVQ-----ESVFLVRYK 153 (199)
Q Consensus 83 ~kG~v~aL~~f-~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~-~-~~~i~~l~~~-~~~IlVGD~~-----~Sv~ll~y~ 153 (199)
..+.+.++..- +|+++++....|.+|+....++........ . ...+.++... +..+++|+.. ..-.+++|+
T Consensus 88 ~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 88 LPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp CSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CCCcceEEEEeCCCeEEEEECCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 34566666543 578888888889999986665433322211 1 2346666653 3357888864 246788887
Q ss_pred CCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcC-CCcEEEEeec
Q psy17021 154 RYENQLLIFADDTQPRWITTSCVL-DYNTVASADK-FGNVCIVSTY 197 (199)
Q Consensus 154 ~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~-~gNl~vlr~~ 197 (199)
.+++..+..+.. +..++.+- |.+.+..+|. .+.|+++.++
T Consensus 168 --~g~~~~~~~~~~--~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 168 --KGKVTKLFADIS--IPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp --TTEEEEEEEEES--SEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred --CCcEEEeeCCCc--ccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 466665543321 23344443 3335555554 4667777653
No 221
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=42.68 E-value=1.4e+02 Score=24.51 Aligned_cols=162 Identities=15% Similarity=0.019 Sum_probs=83.2
Q ss_pred CEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEECCe-eeEEEeeccCCc------------
Q psy17021 21 GALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVGNA-MEFVHKTSVDEV------------ 86 (199)
Q Consensus 21 ~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vgdk-lesVh~~~~kG~------------ 86 (199)
..||++-.+.+|..|+.... .+.....+ .....+.+.-. .++++|..|. ...|+....+|.
T Consensus 5 p~ll~~~~~~I~~i~l~~~~----~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~ 79 (318)
T 3sov_A 5 PLLLYANRRDLRLVDATNGK----ENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL 79 (318)
T ss_dssp CEEEEECEEEEEEEETTCTT----SCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCS
T ss_pred cEEEEEccCeEEEEECCCCc----eEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCC
Confidence 35888888999999986532 01110011 11112222221 2356765443 223444444333
Q ss_pred -c--eEEccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeE
Q psy17021 87 -P--YAMCPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQL 159 (199)
Q Consensus 87 -v--~aL~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l 159 (199)
+ .|+.+..|.|..+- +++|.++++..+..... ... ....+..|.+ .+.++++.|.-..=.+.+++.+....
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l-~~~-~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL-FWQ-ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE-ECS-SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEE-EeC-CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence 1 23333455665552 45677777654321111 111 1223566665 46799999976555677777765444
Q ss_pred EEEeccCCceeEEEEEEE-eCCeEEEEcCCCc
Q psy17021 160 LIFADDTQPRWITTSCVL-DYNTVASADKFGN 190 (199)
Q Consensus 160 ~~varD~~~~wvta~~~L-d~~t~l~aD~~gN 190 (199)
..+..+ .-.|..++.+= +.+++..+|...+
T Consensus 158 ~~~~~~-~l~~Pnglavd~~~~~lY~aD~~~~ 188 (318)
T 3sov_A 158 FIIINS-EIYWPNGLTLDYEEQKLYWADAKLN 188 (318)
T ss_dssp EEEECS-SCSCEEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEC-CCCCccEEEEeccCCEEEEEECCCC
Confidence 444322 23466666663 3567888887655
No 222
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=41.98 E-value=1.6e+02 Score=24.96 Aligned_cols=161 Identities=9% Similarity=-0.020 Sum_probs=81.0
Q ss_pred CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEECCe-eeEEEeeccCC------------
Q psy17021 20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVGNA-MEFVHKTSVDE------------ 85 (199)
Q Consensus 20 ~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vgdk-lesVh~~~~kG------------ 85 (199)
...|++.-++.+|..|+..++.-.- . +.....+.+... .+++||+.|. ...|+....+|
T Consensus 83 ~~~ll~~~~~~I~~i~l~~~~~~~~------~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 83 IAYLFFTNRHEVRKMTLDRSEYTSL------I-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp SCEEEEEETTEEEEECTTSCSCEEE------E-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC
T ss_pred cceeEEeccceeEEEccCCcceeEe------c-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe
Confidence 4578999999999999865432110 1 111222233322 2467766543 22344443333
Q ss_pred ----cc--eEEccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCC
Q psy17021 86 ----VP--YAMCPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRY 155 (199)
Q Consensus 86 ----~v--~aL~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~ 155 (199)
.+ .|+.+..+.|..+- +++|.++++..+........ ....+..|.+ .+.++++.|.-..=.+.+++.+
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~--~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC--SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC--CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 11 12333445554442 34555555543321111111 1123556665 4789999997653456677765
Q ss_pred CCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCc
Q psy17021 156 ENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGN 190 (199)
Q Consensus 156 ~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gN 190 (199)
......+..+ .-.|..++.+= +.+.+..+|...+
T Consensus 234 G~~~~~~~~~-~l~~P~glavd~~~~~lY~aD~~~~ 268 (400)
T 3p5b_L 234 GVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLH 268 (400)
T ss_dssp SCSCEEEECS-SCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCccEEEEEC-CCCceEEEEEEeCCCEEEEEECCCC
Confidence 5433333322 23577777664 3557888887654
No 223
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=40.13 E-value=2.3e+02 Score=26.25 Aligned_cols=108 Identities=10% Similarity=0.090 Sum_probs=66.8
Q ss_pred CCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcC---ceEEEEE--EeCCEEEEEeccccEEEEEEeCC
Q psy17021 84 DEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLP---NLIVKIE--SMGHRIYVSDVQESVFLVRYKRY 155 (199)
Q Consensus 84 kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~---~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~ 155 (199)
.+.|+++..= +|+.||+. ...|++|+... ++.... .+.+ .-+.++. ..|+++++|..-..|-++..+..
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 4556654322 45554433 67899999433 444322 2221 1255555 56889999999888888876543
Q ss_pred CC------eEEEEe---ccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021 156 EN------QLLIFA---DDTQPRWITTSCVLDYNTVASADKFGNVCIVST 196 (199)
Q Consensus 156 ~~------~l~~va---rD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~ 196 (199)
.- .+..+- .+ ...||.++++-.+. ++.+-.++-+.+...
T Consensus 162 ~l~~~~~i~l~ti~~~~~g-h~~~V~sVawSPdg-Laass~D~tVrlWd~ 209 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAG-SKDWVTHIVWYEDV-LVAALSNNSVFSMTV 209 (588)
T ss_dssp TTTCCCCEEEEEEECSCTT-CCCCEEEEEEETTE-EEEEETTCCEEEECC
T ss_pred ccccccceeeeeeeccccc-ccccEEEEEEcCCc-EEEEeCCCeEEEEEC
Confidence 21 234442 22 35799999999766 778777887777654
No 224
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=39.36 E-value=72 Score=29.68 Aligned_cols=61 Identities=13% Similarity=0.025 Sum_probs=35.8
Q ss_pred EEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEecc-CCceeEEEEEEEeCCeEEEEcCCCc
Q psy17021 128 IVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADD-TQPRWITTSCVLDYNTVASADKFGN 190 (199)
Q Consensus 128 i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD-~~~~wvta~~~Ld~~t~l~aD~~gN 190 (199)
+..|.. .+++|++.|.... .+.+|+.+......+... ....+..++.+ |.+.++.+|...+
T Consensus 542 PnGlavd~~~~~LY~aD~~~~-~I~~~d~dG~~~~~~~~~~~~~~~P~glav-d~~~lywtd~~~~ 605 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLH-SISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINE 605 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTT-EEEEECSSSSCCEEECCCSSSCSSCCCCEE-ETTEEEEECSTTT
T ss_pred ccEEEEeccCCEEEEEecCCC-eEEEEccCCCceEEEEecCCcCCCceEeEE-ECCEEEEEeCCCC
Confidence 334444 4789999997653 245555554444444432 22334455544 7788888996544
No 225
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=37.56 E-value=58 Score=28.48 Aligned_cols=64 Identities=14% Similarity=0.038 Sum_probs=39.0
Q ss_pred cCeEEEEeC------CEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEE
Q psy17021 94 QGALLVGVG------RYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLL 160 (199)
Q Consensus 94 ~g~LLaavg------~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~ 160 (199)
+|+.||... ..|++|++...++...... ...+.++.- .|.+|+.+|--....+..|+.+.++..
T Consensus 160 DG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~---~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 160 RGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG---EGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS---SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC---CCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 677666432 4588888866655433222 223444443 467888777655567888887777666
No 226
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=37.05 E-value=2.2e+02 Score=25.15 Aligned_cols=69 Identities=10% Similarity=0.049 Sum_probs=39.6
Q ss_pred ccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEE--EEEeCCEEEEEecc-ccEEEEEEeCCCCeEEEE
Q psy17021 91 CPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVK--IESMGHRIYVSDVQ-ESVFLVRYKRYENQLLIF 162 (199)
Q Consensus 91 ~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~--l~~~~~~IlVGD~~-~Sv~ll~y~~~~~~l~~v 162 (199)
.+..+.++++. .++|.+|++...+.++..... ....+.+ ++..+.+++++... ..|.+ |+...+++...
T Consensus 288 s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v--~D~~tg~l~~~ 361 (543)
T 1nir_A 288 SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAV--IDSKDRRLSAL 361 (543)
T ss_dssp CSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEE--EETTTTEEEEE
T ss_pred CCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEE--EECCCCeEEEe
Confidence 34455677776 468999999765433322222 1222333 33457778887754 35655 67777776554
No 227
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=36.95 E-value=1.8e+02 Score=24.04 Aligned_cols=161 Identities=11% Similarity=-0.021 Sum_probs=85.9
Q ss_pred CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEECCe-eeEEEeeccCCc-----------
Q psy17021 20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVGNA-MEFVHKTSVDEV----------- 86 (199)
Q Consensus 20 ~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vgdk-lesVh~~~~kG~----------- 86 (199)
++.|+++-++.++..++...+.-. +.+.......+... .++++|+.|. ...|+....+|.
T Consensus 44 ~~~ll~~~~~~I~~i~~~g~~~~~-------~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~ 116 (349)
T 3v64_C 44 EPVLLFANRIDIRQVLPHRSEYTL-------LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE 116 (349)
T ss_dssp CCEEEEECBSCEEEECTTSCCEEE-------EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred CceeEeecccceEEEeCCCCeeEE-------eecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCC
Confidence 678999999999988875432110 00111112222211 2456665432 223333333322
Q ss_pred -c--eEEccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEeccccEEEEEEeCCCCeE
Q psy17021 87 -P--YAMCPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSDVQESVFLVRYKRYENQL 159 (199)
Q Consensus 87 -v--~aL~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~Sv~ll~y~~~~~~l 159 (199)
+ .++.+..|.|..+- .+.|.++++..+...... .. ....+..|.+. +.++++.|....=.+.+++.+....
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~-~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 194 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQ-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 194 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CT-TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE-eC-CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc
Confidence 1 23333456665553 356777777543211111 11 11235666654 7899999988756678887765544
Q ss_pred EEEeccCCceeEEEEEEE-eCCeEEEEcCCCc
Q psy17021 160 LIFADDTQPRWITTSCVL-DYNTVASADKFGN 190 (199)
Q Consensus 160 ~~varD~~~~wvta~~~L-d~~t~l~aD~~gN 190 (199)
..+..+ .-.|..++.+= +.+.+..+|...+
T Consensus 195 ~~~~~~-~~~~PnGla~d~~~~~lY~aD~~~~ 225 (349)
T 3v64_C 195 RIIADT-HLFWPNGLTIDYAGRRMYWVDAKHH 225 (349)
T ss_dssp EESCCS-SCSCEEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEC-CCCCcceEEEeCCCCEEEEEECCCC
Confidence 444332 24577777764 4567888887665
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=36.15 E-value=1.6e+02 Score=23.22 Aligned_cols=100 Identities=13% Similarity=-0.026 Sum_probs=55.1
Q ss_pred cCeEEEEeC--CEEEEEEcCCcceeeeeec-cC-cCceEEEEEEe-CCEEEEEec-----c-----------ccEEEEEE
Q psy17021 94 QGALLVGVG--RYLRLYDLGKKKLLRKCEN-KH-LPNLIVKIESM-GHRIYVSDV-----Q-----------ESVFLVRY 152 (199)
Q Consensus 94 ~g~LLaavg--~~v~vy~l~~~~Ll~~~~~-~~-~~~~i~~l~~~-~~~IlVGD~-----~-----------~Sv~ll~y 152 (199)
+|+|+++-. ..|..|+.. .++...... .. ....+..+... +..+.+.|- . ..-.+++|
T Consensus 96 dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~ 174 (305)
T 3dr2_A 96 QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRL 174 (305)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEE
T ss_pred CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEE
Confidence 577877753 578888875 332221111 10 01123334432 345777552 1 24678999
Q ss_pred eCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCC------CcEEEEeec
Q psy17021 153 KRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKF------GNVCIVSTY 197 (199)
Q Consensus 153 ~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~------gNl~vlr~~ 197 (199)
++..+++..+. +. .....+.+- |..++.++|.. +.|+++.+.
T Consensus 175 d~~~g~~~~~~-~~--~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 175 PPDGSPLQRMA-DL--DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp CSSSCCCEEEE-EE--SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred cCCCCcEEEEe-cC--CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence 98777777666 33 234455554 33467888876 567777654
No 229
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=35.86 E-value=2.4e+02 Score=25.15 Aligned_cols=23 Identities=26% Similarity=0.398 Sum_probs=16.3
Q ss_pred cCe-EEEEeCCEEEEEEcCCccee
Q psy17021 94 QGA-LLVGVGRYLRLYDLGKKKLL 116 (199)
Q Consensus 94 ~g~-LLaavg~~v~vy~l~~~~Ll 116 (199)
+|+ |+.+-+..|++|++...+..
T Consensus 162 DG~~la~~~~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 162 KGGFVSFIRGRNLWVIDLASGRQM 185 (741)
T ss_dssp TSSEEEEEETTEEEEEETTTTEEE
T ss_pred CCCEEEEEeCCcEEEEecCCCCEE
Confidence 354 66666889999999765543
No 230
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=35.85 E-value=2e+02 Score=25.96 Aligned_cols=81 Identities=10% Similarity=0.023 Sum_probs=48.8
Q ss_pred EEEEEEcCCcceeeeeeccC-cCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eC
Q psy17021 104 YLRLYDLGKKKLLRKCENKH-LPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DY 179 (199)
Q Consensus 104 ~v~vy~l~~~~Ll~~~~~~~-~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~ 179 (199)
.+.+|+....+-.+...... ......... ..+..+++|-...+ .+..|++..++-.+++.=..+||--++..+ |.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg 298 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK-KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDG 298 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT-CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTS
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC-ceEEecCcCCceeECCCCCccccccceEEecCC
Confidence 57778876654322222210 011122222 23556677754444 678899999999999877789998888888 66
Q ss_pred CeE-EEE
Q psy17021 180 NTV-ASA 185 (199)
Q Consensus 180 ~t~-l~a 185 (199)
.-| +|+
T Consensus 299 ~iyv~GG 305 (656)
T 1k3i_A 299 RVFTIGG 305 (656)
T ss_dssp CEEEECC
T ss_pred eEEEEeC
Confidence 644 444
No 231
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=33.08 E-value=3.2e+02 Score=25.89 Aligned_cols=161 Identities=9% Similarity=-0.023 Sum_probs=79.4
Q ss_pred CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEECCe-eeEEEeeccCC------------
Q psy17021 20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVGNA-MEFVHKTSVDE------------ 85 (199)
Q Consensus 20 ~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vgdk-lesVh~~~~kG------------ 85 (199)
...|++.-.+.+|..++...+... +.......+.+... .+++||+.|. ...|.....+|
T Consensus 395 ~p~Ll~an~~~Ir~i~l~~~~~~~-------l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~ 467 (791)
T 3m0c_C 395 IAYLFFTNRHEVRKMTLDRSEYTS-------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 467 (791)
T ss_dssp CCEEEEECBSSEEEECTTSCCCEE-------EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred ccccccccccceeEeeccCCccee-------eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe
Confidence 346788888889998886533211 00111112222222 2356655432 12233333332
Q ss_pred ----cc--eEEccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCC
Q psy17021 86 ----VP--YAMCPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRY 155 (199)
Q Consensus 86 ----~v--~aL~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~ 155 (199)
.+ .|+-+..++|.++= +++|.++++..+........ ....+..|.+ .+.+|++.|.-..=.+.+++.+
T Consensus 468 ~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~--~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 468 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC--TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC--CCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 12 22333445555443 45666666654321111111 1123556665 4679999997653346666665
Q ss_pred CCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCc
Q psy17021 156 ENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGN 190 (199)
Q Consensus 156 ~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gN 190 (199)
......+..+ .-.|..++.+= +.+.+..+|...+
T Consensus 546 G~~~~~lv~~-~l~~P~GLavD~~~~~LYwaD~~~~ 580 (791)
T 3m0c_C 546 GVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLH 580 (791)
T ss_dssp SCCEEEEECS-SCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCceEEEEeC-CCCCceEEEEecCCCeEEEEeCCCC
Confidence 5444444332 23577777653 3557778887654
No 232
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=32.73 E-value=2.1e+02 Score=26.43 Aligned_cols=69 Identities=9% Similarity=0.066 Sum_probs=38.6
Q ss_pred EEccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCe
Q psy17021 89 AMCPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQ 158 (199)
Q Consensus 89 aL~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~ 158 (199)
++.+-.++|.++= +++|..+++.................+..|...++++++.|... =.+.++++..++
T Consensus 546 avd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~-~~V~~~d~~~G~ 616 (699)
T 1n7d_A 546 TLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN-EAIFSANRLTGS 616 (699)
T ss_dssp EECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTT-TCEEEEETTTEE
T ss_pred EEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCC-CeEEEEEccCCC
Confidence 4445567776664 46788888754322111111101123455666788999999554 346777765443
No 233
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=32.67 E-value=2e+02 Score=23.25 Aligned_cols=101 Identities=14% Similarity=0.052 Sum_probs=56.7
Q ss_pred cccCeEEEEe-C--CEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEeccccEEEEEEeCCCCeEEEEecc-
Q psy17021 92 PFQGALLVGV-G--RYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSDVQESVFLVRYKRYENQLLIFADD- 165 (199)
Q Consensus 92 ~f~g~LLaav-g--~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD- 165 (199)
|-.|+|..+- + .+|..++............ ....+..|... ++++++.|.... .+.+++.+......++..
T Consensus 129 p~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~--~~~~P~gla~d~~~~~lY~~D~~~~-~I~~~d~dg~~~~~~~~~~ 205 (316)
T 1ijq_A 129 PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSKLH-SISSIDVNGGNRKTILEDE 205 (316)
T ss_dssp TTTTEEEEEECSSSCEEEEEETTSCCEEEEECS--SCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEEECT
T ss_pred CCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC--CCCCceEEEEeccCCEEEEEECCCC-eEEEEecCCCceEEEeecC
Confidence 3456665443 3 4666666643321111111 12346666654 789999998764 245555555444455443
Q ss_pred CCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021 166 TQPRWITTSCVLDYNTVASADKFGNVCIVSTY 197 (199)
Q Consensus 166 ~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~ 197 (199)
....+..++.+ |++.+..+|...+ .+.+++
T Consensus 206 ~~~~~P~giav-~~~~ly~~d~~~~-~V~~~~ 235 (316)
T 1ijq_A 206 KRLAHPFSLAV-FEDKVFWTDIINE-AIFSAN 235 (316)
T ss_dssp TTTSSEEEEEE-ETTEEEEEETTTT-EEEEEE
T ss_pred CccCCcEEEEE-ECCEEEEEECCCC-eEEEEe
Confidence 33456677766 7888889997655 444443
No 234
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=32.16 E-value=2e+02 Score=23.17 Aligned_cols=50 Identities=10% Similarity=-0.009 Sum_probs=31.4
Q ss_pred EEEEEEeCCCCeEEEEeccCCceeE-EEEEEEeCCeEEE-Ec-----CCCcEEEEee
Q psy17021 147 VFLVRYKRYENQLLIFADDTQPRWI-TTSCVLDYNTVAS-AD-----KFGNVCIVST 196 (199)
Q Consensus 147 v~ll~y~~~~~~l~~varD~~~~wv-ta~~~Ld~~t~l~-aD-----~~gNl~vlr~ 196 (199)
=.+..|++..++-..++.-..++.. .++..+++.-|+. +- ....++.+.+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 3688899999999988876666655 5555555554433 21 2345666654
No 235
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=30.13 E-value=2.3e+02 Score=23.24 Aligned_cols=72 Identities=11% Similarity=0.094 Sum_probs=45.2
Q ss_pred eEEccccCeEEEEeC------------CEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCC
Q psy17021 88 YAMCPFQGALLVGVG------------RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRY 155 (199)
Q Consensus 88 ~aL~~f~g~LLaavg------------~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~ 155 (199)
.++.+=.+++.++.. ++|.+|+....+.++.-... . ..-..++..|.+++++.- .+|+++ +.+
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~-~-p~~ia~spdg~~l~v~n~-~~v~v~--D~~ 333 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR-D-ALSMTIDQQRNLMLTLDG-GNVNVY--DIS 333 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT-T-CCEEEEETTTTEEEEECS-SCEEEE--ECS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC-C-eeEEEECCCCCEEEEeCC-CeEEEE--ECC
Confidence 345544467766642 48999999887765554443 2 233344446789999886 777776 766
Q ss_pred CCeEEEEec
Q psy17021 156 ENQLLIFAD 164 (199)
Q Consensus 156 ~~~l~~var 164 (199)
.++|.++++
T Consensus 334 t~~l~~~~~ 342 (361)
T 2oiz_A 334 QPEPKLLRT 342 (361)
T ss_dssp SSSCEEEEE
T ss_pred CCcceeeEE
Confidence 774455544
No 236
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=28.04 E-value=2.8e+02 Score=23.65 Aligned_cols=69 Identities=16% Similarity=0.231 Sum_probs=40.7
Q ss_pred EccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccc-cEEEEEEeCCCCeE
Q psy17021 90 MCPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQE-SVFLVRYKRYENQL 159 (199)
Q Consensus 90 L~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~-Sv~ll~y~~~~~~l 159 (199)
+.|-+|+|.++- +.+|+.|+.....+....... .......|. ..+++++|.|... .|..+.++...+.+
T Consensus 233 vdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~ 306 (430)
T 3tc9_A 233 THPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRL 306 (430)
T ss_dssp ECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred EeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccc
Confidence 445578888774 578888888655442222221 112333444 4578899999876 56666666543443
No 237
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=27.86 E-value=2.3e+02 Score=22.47 Aligned_cols=60 Identities=15% Similarity=0.132 Sum_probs=34.6
Q ss_pred eEEEEEEe--CCEEEEEeccccEEEEEEeCCCCeEEEEeccCCc---eeEEEEEEEe-CCeEEEEcCC
Q psy17021 127 LIVKIESM--GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQP---RWITTSCVLD-YNTVASADKF 188 (199)
Q Consensus 127 ~i~~l~~~--~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~---~wvta~~~Ld-~~t~l~aD~~ 188 (199)
.+..+... ++.++|+|...+ +.+|+++.+.+..++..... .....+.+-. +..+.++|..
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~--i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~ 146 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYH--LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVS 146 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTE--EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESC
T ss_pred CCceEEEcCCCCcEEEEECCCC--EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCc
Confidence 36666655 578999999877 56777766655555543211 2233333322 3466666643
No 238
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=27.65 E-value=2.4e+02 Score=22.61 Aligned_cols=172 Identities=12% Similarity=0.057 Sum_probs=83.5
Q ss_pred CCCcceeecc-cCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCee-------eEEEe
Q psy17021 9 VDEVPYAMCP-FQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAM-------EFVHK 80 (199)
Q Consensus 9 ~~~~~~~~~~-f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdkl-------esVh~ 80 (199)
.++.|.+++. -.|+++++....|.+||....++-+-.......+. ..+-......++|+++++.- ..+..
T Consensus 88 ~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~~~~~~~~~~--~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 88 LPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAELESDLPG--NRSNDGRMHPSGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp CSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEECSSTTCTT--EEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred CCCcceEEEEeCCCeEEEEECCCEEEEECCCCcEEEEeeCCCCCCC--CCCCCEEECCCCCEEEEeCCCcCCCCceEEEE
Confidence 3456666653 36899999988899999743332111110000000 11222233334567665431 12332
Q ss_pred eccCCc----------ceEEccc-cCe-EEEEe--CCEEEEEEcC--Cc-ceee-ee--eccCcCceEEEEEEe-CCEEE
Q psy17021 81 TSVDEV----------PYAMCPF-QGA-LLVGV--GRYLRLYDLG--KK-KLLR-KC--ENKHLPNLIVKIESM-GHRIY 139 (199)
Q Consensus 81 ~~~kG~----------v~aL~~f-~g~-LLaav--g~~v~vy~l~--~~-~Ll~-~~--~~~~~~~~i~~l~~~-~~~Il 139 (199)
.. +|. ++.++-- +|+ +.++- ++.|.+|++. .. ++.. .. ........+..+... +..+.
T Consensus 166 ~~-~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lw 244 (326)
T 2ghs_A 166 VA-KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW 244 (326)
T ss_dssp EE-TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE
T ss_pred Ee-CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEE
Confidence 22 332 2333211 343 54443 4689999985 33 3211 11 111112345555543 33567
Q ss_pred EEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eC-CeEEEEc
Q psy17021 140 VSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DY-NTVASAD 186 (199)
Q Consensus 140 VGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~-~t~l~aD 186 (199)
+++...+ .+.+|+++...+..+.- ...+++++.|- ++ +++.++.
T Consensus 245 va~~~~~-~v~~~d~~g~~~~~i~~--~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 245 NARWGEG-AVDRYDTDGNHIARYEV--PGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEETTT-EEEEECTTCCEEEEEEC--SCSBEEEEEEESTTSCEEEEEE
T ss_pred EEEeCCC-EEEEECCCCCEEEEEEC--CCCCcEEEEEecCCCCEEEEEe
Confidence 7775443 46788885555555542 23478888886 33 4444443
No 239
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=27.02 E-value=3e+02 Score=23.53 Aligned_cols=60 Identities=13% Similarity=0.021 Sum_probs=34.3
Q ss_pred cCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccc---cEEEEEEeCCC
Q psy17021 94 QGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQE---SVFLVRYKRYE 156 (199)
Q Consensus 94 ~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~---Sv~ll~y~~~~ 156 (199)
.|.|.++- +++|+.+++...++...... ...+..|.. .+++++|.|... ...++.+.++.
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~---~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSG---LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECC---CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecC---CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 46666554 37888888877655433321 223555554 577899999732 23444455433
No 240
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=26.96 E-value=2.3e+02 Score=22.16 Aligned_cols=110 Identities=10% Similarity=-0.023 Sum_probs=58.1
Q ss_pred CcceEEccc-cCeEEEEe-C-----CEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccc-----cEEEEE
Q psy17021 85 EVPYAMCPF-QGALLVGV-G-----RYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQE-----SVFLVR 151 (199)
Q Consensus 85 G~v~aL~~f-~g~LLaav-g-----~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~-----Sv~ll~ 151 (199)
+.+.++..- +|+++++. + ..|.+|+....++............+.++... +..+++++... ...+++
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~ 166 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYY 166 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEE
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEE
Confidence 445555432 46776665 3 37888888665543221111112346666654 44678888642 467888
Q ss_pred EeCCCCeEEEEeccCCceeEEEEEEEeC-CeEEEEc-CCCcEEEEee
Q psy17021 152 YKRYENQLLIFADDTQPRWITTSCVLDY-NTVASAD-KFGNVCIVST 196 (199)
Q Consensus 152 y~~~~~~l~~varD~~~~wvta~~~Ld~-~t~l~aD-~~gNl~vlr~ 196 (199)
|+++.+++..+..+. ....++.+-.+ +.+.++| ..+.|+++..
T Consensus 167 ~~~~~~~~~~~~~~~--~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~ 211 (333)
T 2dg1_A 167 VSPDFRTVTPIIQNI--SVANGIALSTDEKVLWVTETTANRLHRIAL 211 (333)
T ss_dssp ECTTSCCEEEEEEEE--SSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred EeCCCCEEEEeecCC--CcccceEECCCCCEEEEEeCCCCeEEEEEe
Confidence 887766665554332 12344443322 2344443 4556666654
No 241
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=26.25 E-value=3.2e+02 Score=23.61 Aligned_cols=89 Identities=13% Similarity=0.055 Sum_probs=54.6
Q ss_pred eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEecc--ccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEe
Q psy17021 101 VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQ--ESVFLVRYKRYENQLLIFADDTQPRWITTSCVLD 178 (199)
Q Consensus 101 vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~--~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld 178 (199)
-...+.+|++...++.+..... ..-...+..|.+|+.+.-. .+-.+..++.+.++...+..+ +.++.+..+-.
T Consensus 130 ~~~~~~l~d~~~g~~~~l~~~~---~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~--~~~~~~~~~Sp 204 (582)
T 3o4h_A 130 TEDRVALYALDGGGLRELARLP---GFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG--EGSFSSASISP 204 (582)
T ss_dssp CSSCEEEEEEETTEEEEEEEES---SCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS--SCEEEEEEECT
T ss_pred CCCCceEEEccCCcEEEeecCC---CceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC--CCccccceECC
Confidence 3456679999766554443332 1344455678888754333 225577788766766666433 34667777774
Q ss_pred C-CeEEEEcCCC--cEEEE
Q psy17021 179 Y-NTVASADKFG--NVCIV 194 (199)
Q Consensus 179 ~-~t~l~aD~~g--Nl~vl 194 (199)
+ ..++.+|.++ +|+++
T Consensus 205 DG~~l~~~~~~~~~~i~~~ 223 (582)
T 3o4h_A 205 GMKVTAGLETAREARLVTV 223 (582)
T ss_dssp TSCEEEEEECSSCEEEEEE
T ss_pred CCCEEEEccCCCeeEEEEE
Confidence 4 4666788888 55554
No 242
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=25.10 E-value=2.6e+02 Score=22.15 Aligned_cols=80 Identities=6% Similarity=-0.060 Sum_probs=46.6
Q ss_pred EEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEE-EEEecc-----ccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE
Q psy17021 104 YLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRI-YVSDVQ-----ESVFLVRYKRYENQLLIFADDTQPRWITTSCVL 177 (199)
Q Consensus 104 ~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~I-lVGD~~-----~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L 177 (199)
.+..|+....+-.+..... .+..-.++.+.++.| ++|-.. ..-.+..|++..++-..++.=..+|.-.++...
T Consensus 79 ~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 157 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLPPLP-SARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH 157 (318)
T ss_dssp EEEEEETTTTEEEECSCBS-SCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE
T ss_pred cEEEEeCCCCcEEECCCCC-ccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE
Confidence 3677887666543333332 222333344445544 555432 234578899999999998876777776666666
Q ss_pred eCCeEEE
Q psy17021 178 DYNTVAS 184 (199)
Q Consensus 178 d~~t~l~ 184 (199)
+..-|+.
T Consensus 158 ~~~iyv~ 164 (318)
T 2woz_A 158 NGMIYCL 164 (318)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 5554443
No 243
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=22.71 E-value=2.9e+02 Score=21.91 Aligned_cols=76 Identities=5% Similarity=-0.181 Sum_probs=39.0
Q ss_pred CEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccc----cEEEEEEeCCCCeEEEEeccCCceeEEEEEEE
Q psy17021 103 RYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQE----SVFLVRYKRYENQLLIFADDTQPRWITTSCVL 177 (199)
Q Consensus 103 ~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~----Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L 177 (199)
..|++|++...+........ ....-..... .+.+|+...-.. ...+..++.+......+.......++.+..+-
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQEN-QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp EEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEEC
T ss_pred ceEEEEECCCCceEEeecCC-ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceEC
Confidence 57888888766544433332 1112223333 455665443321 23455556555556666555444566666665
Q ss_pred eC
Q psy17021 178 DY 179 (199)
Q Consensus 178 d~ 179 (199)
.+
T Consensus 247 pd 248 (388)
T 3pe7_A 247 PD 248 (388)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 244
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=22.41 E-value=3e+02 Score=24.42 Aligned_cols=27 Identities=15% Similarity=0.309 Sum_probs=17.8
Q ss_pred eecccCCEEEEeec----------CeeEEEecchhhh
Q psy17021 15 AMCPFQGALLVGVG----------RYLRLYDLGKKKL 41 (199)
Q Consensus 15 ~~~~f~~~ll~~~~----------~~l~~y~~g~k~l 41 (199)
++.+-..+|+.+.. +.+++||+...++
T Consensus 66 ~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 66 GLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred EECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 44555556666654 6899999866554
No 245
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=21.50 E-value=3.8e+02 Score=22.84 Aligned_cols=54 Identities=9% Similarity=-0.057 Sum_probs=27.5
Q ss_pred EEeCCEEEEEeccccEEEEEEeCCC-CeEEEEeccCC---ceeEEEEEE----EeCCeEEEEc
Q psy17021 132 ESMGHRIYVSDVQESVFLVRYKRYE-NQLLIFADDTQ---PRWITTSCV----LDYNTVASAD 186 (199)
Q Consensus 132 ~~~~~~IlVGD~~~Sv~ll~y~~~~-~~l~~varD~~---~~wvta~~~----Ld~~t~l~aD 186 (199)
...|+.++|+|-+.+..+++ ..+. .+....+.-.. +..++.... .+++-|++..
T Consensus 242 ~~~G~vllV~~~~~~~~~l~-S~DgW~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~ 303 (334)
T 2p9w_A 242 PVGNESVLVGARAPYAISFR-SWDNWKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSA 303 (334)
T ss_dssp EETTEEEEEEEETTEEEEEE-CSSTTSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEEC
T ss_pred ccCCEEEEEEcCCCCEEEEE-CCCCcceeEEeeeecCccccCceeEEEEeccccCCeEEEEee
Confidence 34566779999988875544 3222 33443333222 345554444 3444455543
No 246
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=21.42 E-value=4.8e+02 Score=24.76 Aligned_cols=95 Identities=9% Similarity=-0.079 Sum_probs=51.7
Q ss_pred eEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEE-EEeCCCCeEEEEeccCCceeEEE
Q psy17021 96 ALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLV-RYKRYENQLLIFADDTQPRWITT 173 (199)
Q Consensus 96 ~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll-~y~~~~~~l~~varD~~~~wvta 173 (199)
.|+.+....+++|+....+........ ...+..+.- .+..++.+.- ...+. .|+...++...+. ....++.+
T Consensus 310 ~la~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~sdg~~l~~~s~--~~~l~~~~d~~~~~~~~l~--~~~~~~~~ 383 (1045)
T 1k32_A 310 LIAFVSRGQAFIQDVSGTYVLKVPEPL--RIRYVRRGGDTKVAFIHGTR--EGDFLGIYDYRTGKAEKFE--ENLGNVFA 383 (1045)
T ss_dssp CEEEEETTEEEEECTTSSBEEECSCCS--CEEEEEECSSSEEEEEEEET--TEEEEEEEETTTCCEEECC--CCCCSEEE
T ss_pred EEEEEEcCEEEEEcCCCCceEEccCCC--cceEEeeeEcCCCeEEEEEC--CCceEEEEECCCCCceEec--CCccceee
Confidence 466666888999988765543322111 102222221 2334443332 33555 5666666666555 33456677
Q ss_pred EEEE-eCCeEEEEcCCCcEEEEee
Q psy17021 174 SCVL-DYNTVASADKFGNVCIVST 196 (199)
Q Consensus 174 ~~~L-d~~t~l~aD~~gNl~vlr~ 196 (199)
+.+- |...++.+..++.++++.+
T Consensus 384 ~~~SpDG~~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 384 MGVDRNGKFAVVANDRFEIMTVDL 407 (1045)
T ss_dssp EEECTTSSEEEEEETTSEEEEEET
T ss_pred eEECCCCCEEEEECCCCeEEEEEC
Confidence 7766 3345666777777777653
No 247
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=20.90 E-value=5.4e+02 Score=24.38 Aligned_cols=87 Identities=13% Similarity=0.033 Sum_probs=49.8
Q ss_pred CeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEecc----ccEEEEEEeCCCCeEEEEeccCCc
Q psy17021 95 GALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQ----ESVFLVRYKRYENQLLIFADDTQP 168 (199)
Q Consensus 95 g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~----~Sv~ll~y~~~~~~l~~varD~~~ 168 (199)
++|+.+.+..|++|++...+..+..... ..+.++.- .|.+|+.+.-. ....+..|+.+.++...+..+ +
T Consensus 25 ~~iaf~~~~~l~~~~~~gg~~~~lt~~~---~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~--~ 99 (1045)
T 1k32_A 25 DRIIFVCCDDLWEHDLKSGSTRKIVSNL---GVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYF--S 99 (1045)
T ss_dssp TEEEEEETTEEEEEETTTCCEEEEECSS---SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCC--C
T ss_pred CEEEEEECCcEEEEECCCCcEEEeeeCC---CcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccC--C
Confidence 3555555678999999765544433322 23444443 57777765332 345667777777776666543 3
Q ss_pred eeE-------EEEEEEeCCe-EEEEc
Q psy17021 169 RWI-------TTSCVLDYNT-VASAD 186 (199)
Q Consensus 169 ~wv-------ta~~~Ld~~t-~l~aD 186 (199)
.++ .++.+-.++. +..++
T Consensus 100 ~~~~~~~~~~~~~~~SpDg~ll~~~~ 125 (1045)
T 1k32_A 100 GKSTGRRMFTDVAGFDPDGNLIISTD 125 (1045)
T ss_dssp EEEETTEECSEEEEECTTCCEEEEEC
T ss_pred CcccccccccccccCCCCCEEEEEEC
Confidence 445 6777764443 44444
No 248
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=20.58 E-value=3.2e+02 Score=21.54 Aligned_cols=95 Identities=15% Similarity=0.029 Sum_probs=56.1
Q ss_pred EEccccCeEEEEeC--------CEEEEEEcCCcceeeeeeccCcCceEEEEEEeCC-EEEEEeccc---cEEEEEEeCCC
Q psy17021 89 AMCPFQGALLVGVG--------RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH-RIYVSDVQE---SVFLVRYKRYE 156 (199)
Q Consensus 89 aL~~f~g~LLaavg--------~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~-~IlVGD~~~---Sv~ll~y~~~~ 156 (199)
+.+.++|+|.+.-| +.+.+|+....+-.+..... .+..-.+..+.++ .+++|-... +-.+..|+++.
T Consensus 143 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 143 TVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQ-TARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp EEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred eEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCC-CchhceEEEEECCEEEEEeccCCCCccceEEEEECCC
Confidence 34446666654433 25777777665433333222 2333333444455 445665433 23678899999
Q ss_pred CeEEEEeccCCceeEEEEEEEeCCeEEE
Q psy17021 157 NQLLIFADDTQPRWITTSCVLDYNTVAS 184 (199)
Q Consensus 157 ~~l~~varD~~~~wvta~~~Ld~~t~l~ 184 (199)
++-..++.-..+|.-.++..+++.-++.
T Consensus 222 ~~W~~~~~~p~~r~~~~~~~~~~~l~v~ 249 (315)
T 4asc_A 222 NKWAPFEAFPQERSSLSLVSLVGTLYAI 249 (315)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred CeEEECCCCCCcccceeEEEECCEEEEE
Confidence 9999998877788877777776664443
No 249
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=20.16 E-value=4.5e+02 Score=23.15 Aligned_cols=95 Identities=8% Similarity=0.029 Sum_probs=53.7
Q ss_pred EEccccCeEEEEeCCEEEEEEcCC-----cceeeeeeccCcCc---------------eEEEEEEeCCEEEEEecc----
Q psy17021 89 AMCPFQGALLVGVGRYLRLYDLGK-----KKLLRKCENKHLPN---------------LIVKIESMGHRIYVSDVQ---- 144 (199)
Q Consensus 89 aL~~f~g~LLaavg~~v~vy~l~~-----~~Ll~~~~~~~~~~---------------~i~~l~~~~~~IlVGD~~---- 144 (199)
++.|=..+|+.+.++.|++|++.. .+..+..... ... .....+..|.+|+++..-
T Consensus 127 ~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~-~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~ 205 (706)
T 2z3z_A 127 DFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDG-TETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMV 205 (706)
T ss_dssp EECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCC-BTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTS
T ss_pred cCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCC-CCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCC
Confidence 344433356677789999999976 5443322221 111 122233356778777521
Q ss_pred ---------------------------ccEEEEEEeCCCCeEEEEecc-CCceeEEEEEEEeCC-eEEE
Q psy17021 145 ---------------------------ESVFLVRYKRYENQLLIFADD-TQPRWITTSCVLDYN-TVAS 184 (199)
Q Consensus 145 ---------------------------~Sv~ll~y~~~~~~l~~varD-~~~~wvta~~~Ld~~-t~l~ 184 (199)
....+..|+...++...+... ....+++++.+-.++ .++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 274 (706)
T 2z3z_A 206 KPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYV 274 (706)
T ss_dssp CCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEE
T ss_pred ceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEE
Confidence 336677777777766555432 344678888887444 3444
No 250
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=20.05 E-value=3.1e+02 Score=23.48 Aligned_cols=55 Identities=7% Similarity=-0.124 Sum_probs=36.4
Q ss_pred CCEEEEEeccccEEEEEEeCCCCeE-EEEeccCCceeEEEEEEE-eCCeEEEEcCCCc
Q psy17021 135 GHRIYVSDVQESVFLVRYKRYENQL-LIFADDTQPRWITTSCVL-DYNTVASADKFGN 190 (199)
Q Consensus 135 ~~~IlVGD~~~Sv~ll~y~~~~~~l-~~varD~~~~wvta~~~L-d~~t~l~aD~~gN 190 (199)
+..++|+|...+ .+.+|+++.+.+ ..+..+....|...+.+= |.+.+.++|...|
T Consensus 239 ~G~lyv~d~~~~-~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 239 NGKIYYTRYHHA-MISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TCCEEECBTTCS-EEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred CCeEEEEECCCC-EEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 567899998776 588898876665 555555555565555553 2335778887655
Done!