Your job contains 1 sequence.
>psy17022
MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR
KTASLIANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAML
GGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE
KSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPV
LFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKH
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17022
(287 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0051005 - symbol:qless "qless" species:7227 "Droso... 473 6.7e-73 2
ASPGD|ASPL0000038406 - symbol:AN10340 species:162425 "Eme... 312 9.5e-42 2
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 403 1.5e-37 1
POMBASE|SPBPJ4664.01 - symbol:dps1 "decaprenyl diphosphat... 279 1.5e-37 2
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 402 1.9e-37 1
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 402 1.9e-37 1
UNIPROTKB|H0YEE6 - symbol:PDSS1 "Decaprenyl-diphosphate s... 402 1.9e-37 1
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 401 2.4e-37 1
UNIPROTKB|E1BZW8 - symbol:PDSS1 "Uncharacterized protein"... 399 3.9e-37 1
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 399 3.9e-37 1
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 397 6.3e-37 1
TAIR|locus:2062315 - symbol:GPS1 "geranyl diphosphate syn... 281 2.3e-35 2
WB|WBGene00000761 - symbol:coq-1 species:6239 "Caenorhabd... 364 2.0e-33 1
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 242 1.1e-29 2
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 237 3.3e-29 2
SGD|S000000207 - symbol:COQ1 "Hexaprenyl pyrophosphate sy... 320 1.1e-28 1
CGD|CAL0005672 - symbol:orf19.7478 species:5476 "Candida ... 312 4.4e-28 2
UNIPROTKB|I3LJ49 - symbol:I3LJ49 "Uncharacterized protein... 294 5.2e-26 1
DICTYBASE|DDB_G0280293 - symbol:coq1 "trans-prenyltransfe... 294 8.8e-26 1
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 191 2.9e-16 2
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 198 4.6e-16 2
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 185 2.2e-14 2
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 185 2.2e-14 2
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 197 3.1e-14 1
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 192 1.5e-13 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 184 1.2e-12 1
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 182 3.7e-12 1
GENEDB_PFALCIPARUM|PFB0130w - symbol:PFB0130w "polyprenyl... 184 7.5e-12 1
UNIPROTKB|O96130 - symbol:OPP "Octaprenyl pyrophosphate s... 184 7.5e-12 1
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 179 8.1e-12 1
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 177 1.7e-11 1
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 174 2.9e-11 2
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 174 2.9e-11 2
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 145 4.2e-11 2
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 166 2.3e-10 2
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 152 6.8e-10 2
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 160 2.2e-09 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 156 4.1e-09 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 156 4.1e-09 1
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 155 7.2e-09 1
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 155 7.2e-09 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 151 1.7e-08 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 151 1.7e-08 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 152 2.3e-08 1
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 148 4.6e-08 1
UNIPROTKB|P0A5H8 - symbol:MT3506 "(2E,6E)-farnesyl diphos... 148 6.2e-08 1
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 147 8.6e-08 1
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 147 8.7e-08 1
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 146 9.5e-08 1
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 143 2.0e-07 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 143 2.0e-07 1
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 143 2.2e-07 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 142 3.1e-07 1
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 142 3.3e-07 1
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 139 4.3e-07 1
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 134 2.2e-06 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 132 3.9e-06 1
UNIPROTKB|A6QR05 - symbol:PDSS2 "PDSS2 protein" species:9... 92 4.2e-06 2
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 132 4.2e-06 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 130 4.9e-06 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 130 4.9e-06 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 130 7.3e-06 1
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 126 1.5e-05 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 126 2.2e-05 1
TIGR_CMR|SO_1526 - symbol:SO_1526 "geranyltranstransferas... 121 5.2e-05 1
UNIPROTKB|I3LGK0 - symbol:PDSS2 "Uncharacterized protein"... 85 7.2e-05 2
UNIPROTKB|F1NMS4 - symbol:PDSS2 "Uncharacterized protein"... 87 7.7e-05 2
UNIPROTKB|J9NVK1 - symbol:PDSS2 "Uncharacterized protein"... 88 8.0e-05 2
UNIPROTKB|Q86YH6 - symbol:PDSS2 "Decaprenyl-diphosphate s... 88 0.00016 2
ZFIN|ZDB-GENE-040718-43 - symbol:pdss2 "prenyl (decapreny... 95 0.00017 2
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 116 0.00021 1
FB|FBgn0037044 - symbol:CG10585 species:7227 "Drosophila ... 117 0.00033 1
MGI|MGI:1918615 - symbol:Pdss2 "prenyl (solanesyl) diphos... 84 0.00046 2
UNIPROTKB|Q5LX41 - symbol:ispA "Farnesyl diphosphate synt... 112 0.00055 1
TIGR_CMR|SPO_0248 - symbol:SPO_0248 "farnesyl diphosphate... 112 0.00055 1
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 111 0.00075 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 110 0.00096 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 110 0.00096 1
>FB|FBgn0051005 [details] [associations]
symbol:qless "qless" species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 EMBL:AE014297 GO:GO:0043066 GO:GO:0033554
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0014019
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 OMA:KPSVNAL
FlyBase:FBgn0051005 EMBL:BT044087 RefSeq:NP_733425.1
UniGene:Dm.5492 SMR:Q9V9Z3 IntAct:Q9V9Z3 MINT:MINT-1009288
STRING:Q9V9Z3 EnsemblMetazoa:FBtr0085769 GeneID:43697
KEGG:dme:Dmel_CG31005 UCSC:CG31005-RA CTD:43697 InParanoid:Q9V9Z3
GenomeRNAi:43697 NextBio:835306 Uniprot:Q9V9Z3
Length = 436
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 89/109 (81%), Positives = 104/109 (95%)
Query: 73 IMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAF 132
I+TDLVQGEFMQLGS+ETENERFAHYLTKTYRKTASLIAN +KA+A++ ADD ++EVAF
Sbjct: 255 ILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEVAF 314
Query: 133 EYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
+YGRN+G+AFQLVDD+LDF+SS++ MGKPTAADLKLGLATAPVLFACEK
Sbjct: 315 QYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEK 363
Score = 458 (166.3 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 83/110 (75%), Positives = 101/110 (91%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 237
A + +A++ ADD ++EVAF+YGRN+G+AFQLVDD+LDF+SS++ MGKPTAADLKLGLAT
Sbjct: 295 ALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLAT 354
Query: 238 APVLFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKH 287
APVLFACEK+PELNPM+MRRF EPGDVE+AFE VHKS GLEQT+FLA+KH
Sbjct: 355 APVLFACEKYPELNPMVMRRFSEPGDVERAFELVHKSHGLEQTRFLAKKH 404
Score = 297 (109.6 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 58/72 (80%), Positives = 67/72 (93%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
MAGD+IL++A MI+RLR +DVT+ LSQI+TDLVQGEFMQLGS+ETENERFAHYLTKTYR
Sbjct: 227 MAGDYILSIASIMIARLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYR 286
Query: 61 KTASLIANCVKA 72
KTASLIAN +KA
Sbjct: 287 KTASLIANALKA 298
>ASPGD|ASPL0000038406 [details] [associations]
symbol:AN10340 species:162425 "Emericella nidulans"
[GO:0032476 "decaprenyl diphosphate synthase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016209 "antioxidant
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019418 "sulfide oxidation" evidence=IEA]
[GO:0070219 "cellular sulfide ion homeostasis" evidence=IEA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001306
GO:GO:0006744 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 ProteinModelPortal:C8VJN5
EnsemblFungi:CADANIAT00010341 OMA:YLHKTYL Uniprot:C8VJN5
Length = 456
Score = 312 (114.9 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 62/122 (50%), Positives = 89/122 (72%)
Query: 167 KLGLATAPVLF-ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGK 225
K L TA ++ +C +A+LG + + E A+ YGRNLG+AFQLVDD+LD+ S +GK
Sbjct: 303 KTYLKTASLISKSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYTVSGVELGK 362
Query: 226 PTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLAR 285
P ADL+LGLATAP+LFA ++ PEL P++ R+F GDVEKA E V+++ G+EQT+ LA+
Sbjct: 363 PAGADLELGLATAPLLFAWKQHPELGPLVGRKFCREGDVEKARELVYRANGVEQTRALAQ 422
Query: 286 KH 287
++
Sbjct: 423 EY 424
Score = 287 (106.1 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 61/128 (47%), Positives = 87/128 (67%)
Query: 66 IANCVKAIMTDLVQGEFMQL-GSKETE------NERFAHYLTKTYRKTASLIANCVKASA 118
+ + ++ +LV+GEFMQL + E E ++ ++YL KTY KTASLI+ +A+A
Sbjct: 261 VTELLATVIANLVEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTASLISKSCRAAA 320
Query: 119 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 178
+LG + + E A+ YGRNLG+AFQLVDD+LD+ S +GKP ADL+LGLATAP+LFA
Sbjct: 321 LLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYTVSGVELGKPAGADLELGLATAPLLFA 380
Query: 179 CEKSAMLG 186
++ LG
Sbjct: 381 WKQHPELG 388
Score = 147 (56.8 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQL-GSKETE------NERFAH 53
+AGDF+L A ++RLRD +VT L+ ++ +LV+GEFMQL + E E ++ ++
Sbjct: 240 LAGDFLLGRASVALARLRDPEVTELLATVIANLVEGEFMQLKNTAEDEKNPVFTDDTISY 299
Query: 54 YLTKTYRKTASLIANCVKA 72
YL KTY KTASLI+ +A
Sbjct: 300 YLQKTYLKTASLISKSCRA 318
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 75/116 (64%), Positives = 97/116 (83%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+ + + ++ DLV+GEF+QLGSKE ENERFAHYL KT++KTASLIAN KA ++LG D
Sbjct: 222 VISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDP 281
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
+ E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLGLAT PVLFAC++
Sbjct: 282 AVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 337
Score = 220 (82.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGD IL+ A ++R+ + V L+Q++ DLV+GEF+QLGSKE ENERFAHYL KT++
Sbjct: 201 LAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFK 260
Query: 61 KTASLIANCVKAI 73
KTASLIAN KA+
Sbjct: 261 KTASLIANSCKAV 273
>POMBASE|SPBPJ4664.01 [details] [associations]
symbol:dps1 "decaprenyl diphosphate synthase subunit
Dps1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070219 "cellular sulfide ion
homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IMP]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 PomBase:SPBPJ4664.01 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016740 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016209
GO:GO:0019646 GO:GO:0070219 GO:GO:0006119 GO:GO:0019418
GO:GO:0006744 eggNOG:COG0142 HOGENOM:HOG000009104 KO:K05355
OrthoDB:EOG4HB1V2 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0032476 EMBL:D84311 EMBL:D89265 PIR:JC5429
PIR:T43193 RefSeq:NP_595276.1 ProteinModelPortal:O43091
STRING:O43091 EnsemblFungi:SPBPJ4664.01.1 GeneID:2541402
KEGG:spo:SPBPJ4664.01 OMA:KPSVNAL NextBio:20802509 Uniprot:O43091
Length = 378
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 60/127 (47%), Positives = 81/127 (63%)
Query: 66 IANCVKAIMTDLVQGEFMQL------GSKETENERFAHYLTKTYRKTASLIANCVKASAM 119
+ + ++ DLV+GEF+QL S E + F +Y+ K++ KTASLI+ KAS +
Sbjct: 184 VTELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNFDYYIEKSFLKTASLISKSCKASTI 243
Query: 120 LGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFAC 179
LG ++ A EYGR +G AFQL+DD+LD+ S D +GK ADLKLGLATAPVLFA
Sbjct: 244 LGQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLATAPVLFAW 303
Query: 180 EKSAMLG 186
+K LG
Sbjct: 304 KKYPELG 310
Score = 276 (102.2 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 56/119 (47%), Positives = 79/119 (66%)
Query: 170 LATAPVLF-ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTA 228
L TA ++ +C+ S +LG ++ A EYGR +G AFQL+DD+LD+ S D +GK
Sbjct: 228 LKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAG 287
Query: 229 ADLKLGLATAPVLFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKH 287
ADLKLGLATAPVLFA +K+PEL MI+ RF P D+++A V + +EQT A+++
Sbjct: 288 ADLKLGLATAPVLFAWKKYPELGAMIVNRFNHPSDIQRARSLVECTDAIEQTITWAKEY 346
Score = 143 (55.4 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQL------GSKETENERFAHY 54
+AG+FILA A ++RLR+ VT L+ ++ DLV+GEF+QL S E + F +Y
Sbjct: 163 LAGNFILARASTAMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSLEIKQSNFDYY 222
Query: 55 LTKTYRKTASLIANCVKA 72
+ K++ KTASLI+ KA
Sbjct: 223 IEKSFLKTASLISKSCKA 240
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 75/116 (64%), Positives = 97/116 (83%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+ + + ++ DLV+GEF+QLGSKE ENERFAHYL KT++KTASLIAN KA ++LG D
Sbjct: 177 VISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDP 236
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
+ E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLGLAT PVLFAC++
Sbjct: 237 VVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 292
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 76/156 (48%), Positives = 114/156 (73%)
Query: 138 LGIAFQLVDDLL--DFIS--SSDAMGKPTAADL-KLGLATAPVLF-ACEKSAMLGGADDK 191
+ I Q+++DL+ +F+ S + + A L K TA ++ +C+ ++LG D
Sbjct: 178 ISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPV 237
Query: 192 LSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELN 251
+ E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLGLAT PVLFAC++FPE+N
Sbjct: 238 VHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMN 297
Query: 252 PMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKH 287
MIMRRF PGDV++A ++V +S G++QT +LA+++
Sbjct: 298 AMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQRY 333
Score = 223 (83.6 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGD IL+ A ++R+ + V L+Q++ DLV+GEF+QLGSKE ENERFAHYL KT++
Sbjct: 156 LAGDLILSAASMALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFK 215
Query: 61 KTASLIANCVKAI 73
KTASLIAN KA+
Sbjct: 216 KTASLIANSCKAV 228
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 75/116 (64%), Positives = 97/116 (83%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+ + + ++ DLV+GEF+QLGSKE ENERFAHYL KT++KTASLIAN KA ++LG D
Sbjct: 227 VISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDP 286
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
+ E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLGLAT PVLFAC++
Sbjct: 287 VVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 342
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 76/156 (48%), Positives = 114/156 (73%)
Query: 138 LGIAFQLVDDLL--DFIS--SSDAMGKPTAADL-KLGLATAPVLF-ACEKSAMLGGADDK 191
+ I Q+++DL+ +F+ S + + A L K TA ++ +C+ ++LG D
Sbjct: 228 ISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPV 287
Query: 192 LSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELN 251
+ E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLGLAT PVLFAC++FPE+N
Sbjct: 288 VHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMN 347
Query: 252 PMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKH 287
MIMRRF PGDV++A ++V +S G++QT +LA+++
Sbjct: 348 AMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQY 383
Score = 220 (82.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGD IL+ A ++R+ + V L+Q++ DLV+GEF+QLGSKE ENERFAHYL KT++
Sbjct: 206 LAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFK 265
Query: 61 KTASLIANCVKAI 73
KTASLIAN KA+
Sbjct: 266 KTASLIANSCKAV 278
>UNIPROTKB|H0YEE6 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:AL390961 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HGNC:HGNC:17759 Ensembl:ENST00000491711 Uniprot:H0YEE6
Length = 158
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 75/116 (64%), Positives = 97/116 (83%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+ + + ++ DLV+GEF+QLGSKE ENERFAHYL KT++KTASLIAN KA ++LG D
Sbjct: 30 VISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDP 89
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
+ E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLGLAT PVLFAC++
Sbjct: 90 VVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 145
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 54/115 (46%), Positives = 80/115 (69%)
Query: 138 LGIAFQLVDDLL--DFIS--SSDAMGKPTAADL-KLGLATAPVLF-ACEKSAMLGGADDK 191
+ I Q+++DL+ +F+ S + + A L K TA ++ +C+ ++LG D
Sbjct: 31 ISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPV 90
Query: 192 LSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 246
+ E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLGLAT PVLFAC++
Sbjct: 91 VHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 145
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGD IL+ A ++R+ + V L+Q++ DLV+GEF+QLGSKE ENERFAHYL KT++
Sbjct: 9 LAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFK 68
Query: 61 KTASLIANCVKAI 73
KTASLIAN KA+
Sbjct: 69 KTASLIANSCKAV 81
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 74/116 (63%), Positives = 97/116 (83%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+ + + ++ DLV+GEF+QLGSKE ENERFAHYL KT++KTASLIAN KA ++LG D
Sbjct: 221 VVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDP 280
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
+ E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLG+AT PVLFAC++
Sbjct: 281 VVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQ 336
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 83/206 (40%), Positives = 134/206 (65%)
Query: 89 ETENERFAHYLTKTY-RKTASLIANCVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDD 147
+ + R H + K + K A L + + ++A + A ++ A + + Q+++D
Sbjct: 179 DASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALA--RIGNTAV-----VSMLAQVIED 231
Query: 148 LL--DFIS--SSDAMGKPTAADL-KLGLATAPVLF-ACEKSAMLGGADDKLSEVAFEYGR 201
L+ +F+ S + + A L K TA ++ +C+ ++LG D + E+A++YG+
Sbjct: 232 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGK 291
Query: 202 NLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEP 261
N+GIAFQL+DD+LDF S SD MGKPT+ADLKLG+AT PVLFAC++FPE+N MIMRRF P
Sbjct: 292 NVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQFPEMNAMIMRRFSLP 351
Query: 262 GDVEKAFEFVHKSQGLEQTKFLARKH 287
GDV++A ++V +S G++QT +LA+++
Sbjct: 352 GDVDRARQYVLQSDGVQQTTYLAQQY 377
Score = 221 (82.9 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGD IL+ A ++R+ + V L+Q++ DLV+GEF+QLGSKE ENERFAHYL KT++
Sbjct: 200 LAGDLILSAASVALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFK 259
Query: 61 KTASLIANCVKAI 73
KTASLIAN KA+
Sbjct: 260 KTASLIANSCKAV 272
>UNIPROTKB|E1BZW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:AADN02000555 IPI:IPI00572129
ProteinModelPortal:E1BZW8 Ensembl:ENSGALT00000012224
NextBio:20823389 Uniprot:E1BZW8
Length = 366
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 75/116 (64%), Positives = 96/116 (82%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
I + + ++ DLV+GEF+QLGSKE ENERFAHYL KT++KTASLIAN KA ++LG D
Sbjct: 178 IISVLTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDP 237
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
K+ E+A++YG+N+GIAFQL+DD+LDF S +D +GKP AADLKLGLAT PVLFAC +
Sbjct: 238 KVHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPVLFACRQ 293
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 75/156 (48%), Positives = 114/156 (73%)
Query: 138 LGIAFQLVDDLL--DFIS--SSDAMGKPTAADL-KLGLATAPVLF-ACEKSAMLGGADDK 191
+ + Q+++DL+ +F+ S + + A L K TA ++ +C+ ++LG D K
Sbjct: 179 ISVLTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPK 238
Query: 192 LSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELN 251
+ E+A++YG+N+GIAFQL+DD+LDF S +D +GKP AADLKLGLAT PVLFAC +FPE+N
Sbjct: 239 VHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPVLFACRQFPEMN 298
Query: 252 PMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKH 287
MIMRRF +PGDVE+A ++V +S G++QT +LA+++
Sbjct: 299 AMIMRRFSKPGDVERARKYVLQSDGVQQTTYLAQRY 334
Score = 227 (85.0 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 43/73 (58%), Positives = 58/73 (79%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGDFIL+ A ++R+ + + L+Q++ DLV+GEF+QLGSKE ENERFAHYL KT++
Sbjct: 157 LAGDFILSAASLALARIGNTTIISVLTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFK 216
Query: 61 KTASLIANCVKAI 73
KTASLIAN KA+
Sbjct: 217 KTASLIANSCKAV 229
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 74/116 (63%), Positives = 97/116 (83%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+ + + ++ DLV+GEF+QLGSKE ENERFAHYL KT++KTASLIAN KA ++LG D
Sbjct: 230 VISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDP 289
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
+ E+A++YG+N+GIAFQL+DD+LDF S S+ MGKPT+ADLKLGLAT PVLFAC++
Sbjct: 290 AVHEIAYQYGKNVGIAFQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFACQQ 345
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 75/156 (48%), Positives = 114/156 (73%)
Query: 138 LGIAFQLVDDLL--DFIS--SSDAMGKPTAADL-KLGLATAPVLF-ACEKSAMLGGADDK 191
+ I Q+++DL+ +F+ S + + A L K TA ++ +C+ ++LG D
Sbjct: 231 ISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPA 290
Query: 192 LSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELN 251
+ E+A++YG+N+GIAFQL+DD+LDF S S+ MGKPT+ADLKLGLAT PVLFAC++FPE+N
Sbjct: 291 VHEIAYQYGKNVGIAFQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFACQQFPEMN 350
Query: 252 PMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKH 287
MIMRRF PGDV++A ++V +S G++QT +LA+++
Sbjct: 351 AMIMRRFGSPGDVDRALQYVLQSDGVQQTTYLAQRY 386
Score = 220 (82.5 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGD IL+ A ++R+ + V L+Q++ DLV+GEF+QLGSKE ENERFAHYL KT++
Sbjct: 209 LAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFK 268
Query: 61 KTASLIANCVKAI 73
KTASLIAN KA+
Sbjct: 269 KTASLIANSCKAV 281
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 73/116 (62%), Positives = 98/116 (84%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+ + + ++ DLV+GEFMQLGSKE ENERF HYL KT++KTASLIAN KA ++L +D
Sbjct: 223 VVSVLSQVIEDLVRGEFMQLGSKENENERFKHYLEKTFKKTASLIANSCKAVSILVNSDP 282
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
++ E+A++YGRN+GIAFQLVDD+LDF S+++ +GKP+AADLKLGLAT PVLFAC++
Sbjct: 283 EVHEIAYQYGRNVGIAFQLVDDILDFTSNANCLGKPSAADLKLGLATGPVLFACQQ 338
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 64/110 (58%), Positives = 93/110 (84%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 237
+C+ ++L +D ++ E+A++YGRN+GIAFQLVDD+LDF S+++ +GKP+AADLKLGLAT
Sbjct: 270 SCKAVSILVNSDPEVHEIAYQYGRNVGIAFQLVDDILDFTSNANCLGKPSAADLKLGLAT 329
Query: 238 APVLFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKH 287
PVLFAC++FPEL+ MIMRRF GDV++A+++V KS G+EQT +LA+ +
Sbjct: 330 GPVLFACQQFPELHSMIMRRFSSDGDVDRAWQYVLKSDGVEQTNYLAQHY 379
Score = 234 (87.4 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 58/121 (47%), Positives = 74/121 (61%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGDFIL+ A ++R+ + V LSQ++ DLV+GEFMQLGSKE ENERF HYL KT++
Sbjct: 202 LAGDFILSAASMALARIGNTTVVSVLSQVIEDLVRGEFMQLGSKENENERFKHYLEKTFK 261
Query: 61 KTASLIANCVKAIMTDLVQG--EFMQLGSKETENERFAHYLTKTYRKTASLIANCV-KAS 117
KTASLIAN KA+ LV E ++ + N A L S ANC+ K S
Sbjct: 262 KTASLIANSCKAVSI-LVNSDPEVHEIAYQYGRNVGIAFQLVDDILDFTSN-ANCLGKPS 319
Query: 118 A 118
A
Sbjct: 320 A 320
>TAIR|locus:2062315 [details] [associations]
symbol:GPS1 "geranyl diphosphate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IGI;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 GO:GO:0009507
EMBL:CP002685 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006744 GO:GO:0009790 EMBL:AC004077
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347 GO:GO:0004659
OMA:KPSVNAL GO:GO:0052924 EMBL:Y17376 EMBL:AY093006 EMBL:BT020524
IPI:IPI00537358 IPI:IPI00538487 IPI:IPI00657038 PIR:A84759
RefSeq:NP_001031483.1 RefSeq:NP_850234.1 UniGene:At.25503 PDB:3APZ
PDB:3AQ0 PDBsum:3APZ PDBsum:3AQ0 ProteinModelPortal:Q5HZ00
SMR:Q5HZ00 STRING:Q5HZ00 PRIDE:Q5HZ00 EnsemblPlants:AT2G34630.2
GeneID:818028 KEGG:ath:AT2G34630 TAIR:At2g34630 InParanoid:Q8RWM1
KO:K14066 ProtClustDB:PLN02890 EvolutionaryTrace:Q9FT89
Genevestigator:Q5HZ00 Uniprot:Q5HZ00
Length = 422
Score = 281 (104.0 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 63/152 (41%), Positives = 96/152 (63%)
Query: 61 KTASLIANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAML 120
K ++A A+ LV GE M++ S + +Y+ KTY KTASLI+N KA A+L
Sbjct: 224 KNTEVVALLATAV-EHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVL 282
Query: 121 GGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 180
G +++ +AFEYGRNLG+AFQL+DD+LDF +S ++GK + +D++ G+ TAP+LFA E
Sbjct: 283 TGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAME 342
Query: 181 KSAMLGGADDKLS------EVAFEY-GRNLGI 205
+ L D++ ++A EY G++ GI
Sbjct: 343 EFPQLREVVDQVEKDPRNVDIALEYLGKSKGI 374
Score = 261 (96.9 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 47/110 (42%), Positives = 83/110 (75%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 237
+C+ A+L G +++ +AFEYGRNLG+AFQL+DD+LDF +S ++GK + +D++ G+ T
Sbjct: 275 SCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVIT 334
Query: 238 APVLFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKH 287
AP+LFA E+FP+L ++ + ++P +V+ A E++ KS+G+++ + LA +H
Sbjct: 335 APILFAMEEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRARELAMEH 384
Score = 143 (55.4 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGDF+L+ AC ++ L++ +V L+ + LV GE M++ S + +Y+ KTY
Sbjct: 207 LAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYY 266
Query: 61 KTASLIANCVKAI 73
KTASLI+N KA+
Sbjct: 267 KTASLISNSCKAV 279
>WB|WBGene00000761 [details] [associations]
symbol:coq-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0040011 GO:GO:0040017 GO:GO:0006744 eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 EMBL:FO080645
PIR:G87775 PIR:T25573 RefSeq:NP_491588.1 ProteinModelPortal:P91093
SMR:P91093 STRING:P91093 PaxDb:P91093 EnsemblMetazoa:C24A11.9
GeneID:172190 KEGG:cel:CELE_C24A11.9 UCSC:C24A11.9 CTD:172190
WormBase:C24A11.9 InParanoid:P91093 OMA:PNRNEST NextBio:874409
Uniprot:P91093
Length = 393
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 92/199 (46%), Positives = 127/199 (63%)
Query: 102 TYRKTASLIANCV---KASAMLGGAD-DKLSEVAFEYGR-NL-GIAFQLVDDLL--DFIS 153
T R +AS+ N V K S ++G + +++ G+ N+ + +++DL+ +F+
Sbjct: 161 TRRGSASV--NAVWGNKMSVLVGDFILARATQILCSIGKPNIISVMASIIEDLVLGEFMQ 218
Query: 154 SSDAMGKPTAADL------KLGLATAPVLFA--CEKSAMLG-GADDKLSEVAFEYGRNLG 204
S T D K TA LFA C +A+L G+D KL E+AFEYGRNLG
Sbjct: 219 MSTTPTDATPVDRMKAYIEKTHRKTAS-LFASSCRSAAILADGSDLKLHEIAFEYGRNLG 277
Query: 205 IAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEPGDV 264
IAFQL DDLLDFI+++D MGKP AADLKLGLATAPVL+ACE++PELN M++R+F+ GD
Sbjct: 278 IAFQLADDLLDFIATADEMGKPVAADLKLGLATAPVLYACEQYPELNTMLLRKFKHDGDA 337
Query: 265 EKAFEFVHKSQGLEQTKFL 283
EKA E V S G+++T+ L
Sbjct: 338 EKAREIVVNSDGMDKTRRL 356
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 72/120 (60%), Positives = 94/120 (78%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETEN---ERFAHYLTKTYRKTASLIANCVKASAMLG- 121
I + + +I+ DLV GEFMQ+ + T+ +R Y+ KT+RKTASL A+ +++A+L
Sbjct: 200 IISVMASIIEDLVLGEFMQMSTTPTDATPVDRMKAYIEKTHRKTASLFASSCRSAAILAD 259
Query: 122 GADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
G+D KL E+AFEYGRNLGIAFQL DDLLDFI+++D MGKP AADLKLGLATAPVL+ACE+
Sbjct: 260 GSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLKLGLATAPVLYACEQ 319
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETEN---ERFAHYLTK 57
+ GDFILA A Q++ + ++ ++ I+ DLV GEFMQ+ + T+ +R Y+ K
Sbjct: 179 LVGDFILARATQILCSIGKPNIISVMASIIEDLVLGEFMQMSTTPTDATPVDRMKAYIEK 238
Query: 58 TYRKTASLIANCVK--AIMTD 76
T+RKTASL A+ + AI+ D
Sbjct: 239 THRKTASLFASSCRSAAILAD 259
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 242 (90.2 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 50/122 (40%), Positives = 78/122 (63%)
Query: 166 LKLGLATAPVLFACEK-SAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMG 224
LK TA ++ A K +A+ + K++E +++G+NLG++FQ+VDD+LDF S++ +G
Sbjct: 263 LKSYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLG 322
Query: 225 KPTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLA 284
KP A DL G TAPV+FA E P L +I F EPG +E+A E V G+++ + LA
Sbjct: 323 KPAANDLAKGNITAPVIFALENEPRLREIIESEFCEPGSLEEAIEIVRNRGGIKKAQELA 382
Query: 285 RK 286
++
Sbjct: 383 KE 384
Score = 238 (88.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 46/120 (38%), Positives = 72/120 (60%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+ + ++ D GE Q S + + Y+ K+Y KTASL+A K +A+ +
Sbjct: 229 VIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVES 288
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAML 185
K++E +++G+NLG++FQ+VDD+LDF S++ +GKP A DL G TAPV+FA E L
Sbjct: 289 KVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALENEPRL 348
Score = 110 (43.8 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGDF+ A A ++ L + +V +SQ++ D GE Q S + + Y+ K+Y
Sbjct: 208 LAGDFMFAQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYY 267
Query: 61 KTASLIANCVK 71
KTASL+A K
Sbjct: 268 KTASLVAASTK 278
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 237 (88.5 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 50/122 (40%), Positives = 78/122 (63%)
Query: 166 LKLGLATAPVLFACEK-SAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMG 224
LK TA ++ A K +A+ + ++E +E+G+NLG++FQ+VDD+LDF S++ +G
Sbjct: 252 LKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLG 311
Query: 225 KPTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLA 284
KP +DL G TAPV+FA E+ P L +I F E G +E+A E V K G+++ + LA
Sbjct: 312 KPAGSDLAKGNLTAPVIFALEREPRLREIIESEFCEAGSLEEAIEAVTKGGGIKRAQELA 371
Query: 285 RK 286
R+
Sbjct: 372 RE 373
Score = 236 (88.1 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 45/120 (37%), Positives = 72/120 (60%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+ + ++ D GE Q S + + YL K++ KTASL+A K +A+ +
Sbjct: 218 VIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEP 277
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAML 185
++E +E+G+NLG++FQ+VDD+LDF S++ +GKP +DL G TAPV+FA E+ L
Sbjct: 278 DVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALEREPRL 337
Score = 110 (43.8 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGDF+ A A ++ L + +V +SQ++ D GE Q S + + YL K++
Sbjct: 197 LAGDFMFAQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFY 256
Query: 61 KTASLIANCVK 71
KTASL+A K
Sbjct: 257 KTASLVAASTK 267
>SGD|S000000207 [details] [associations]
symbol:COQ1 "Hexaprenyl pyrophosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IMP;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232 SGD:S000000207
GO:GO:0005739 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:BK006936 GO:GO:0006744
EMBL:J05547 EMBL:Z35872 EMBL:AY558099 EMBL:Z26494 PIR:A36625
RefSeq:NP_009557.1 ProteinModelPortal:P18900 SMR:P18900
DIP:DIP-1103N IntAct:P18900 MINT:MINT-427151 STRING:P18900
PaxDb:P18900 PRIDE:P18900 EnsemblFungi:YBR003W GeneID:852288
KEGG:sce:YBR003W CYGD:YBR003w eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 KO:K05355
OMA:RASSIFA OrthoDB:EOG4HB1V2 BioCyc:MetaCyc:MONOMER-13702
BRENDA:2.5.1.33 NextBio:970928 Genevestigator:P18900
GermOnline:YBR003W GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Uniprot:P18900
Length = 473
Score = 320 (117.7 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 76/190 (40%), Positives = 111/190 (58%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENE----RFAHYLT 56
+AGDF+L A ISRL + +V +S + +LV+GEFMQL + + + H L
Sbjct: 219 LAGDFLLGRATVSISRLHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLL 278
Query: 57 KTYRKTASLIANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKA 116
K + + + + QG +QL + F +Y+ KTY KTA+LI+ +
Sbjct: 279 PVPSKKLEVKEHDFR--VPSRQQG--LQLSHDQIIETAFEYYIHKTYLKTAALISKSCRC 334
Query: 117 SAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVL 176
+A+L GA + + +++GRNLGI FQLVDD+LDF S +GKP+ ADLKLG+ATAPVL
Sbjct: 335 AAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVL 394
Query: 177 FACEKSAMLG 186
FA ++ LG
Sbjct: 395 FAWKEDPSLG 404
Score = 294 (108.6 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 60/122 (49%), Positives = 82/122 (67%)
Query: 167 KLGLATAPVLF-ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGK 225
K L TA ++ +C +A+L GA + + +++GRNLGI FQLVDD+LDF S +GK
Sbjct: 319 KTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGK 378
Query: 226 PTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLAR 285
P+ ADLKLG+ATAPVLFA ++ P L P+I R F E GDVEK + V G+ +TK LA
Sbjct: 379 PSGADLKLGIATAPVLFAWKEDPSLGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAE 438
Query: 286 KH 287
++
Sbjct: 439 EY 440
>CGD|CAL0005672 [details] [associations]
symbol:orf19.7478 species:5476 "Candida albicans" [GO:0032476
"decaprenyl diphosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019418 "sulfide oxidation"
evidence=IEA] [GO:0070219 "cellular sulfide ion homeostasis"
evidence=IEA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IEA]
[GO:0008834 "di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0005672 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
KO:K05355 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000039 RefSeq:XP_718635.1 ProteinModelPortal:Q5AAL1
STRING:Q5AAL1 GeneID:3639664 KEGG:cal:CaO19.7478 Uniprot:Q5AAL1
Length = 510
Score = 312 (114.9 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 80/202 (39%), Positives = 114/202 (56%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETEN----ERFAHYLT 56
+AGDF+L A I+RLR+ +V LS + +LV+GEFMQL + +N E F
Sbjct: 241 LAGDFLLGRASVAIARLRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNNDEIFNDGDV 300
Query: 57 KTYRKTASLIANCVKAIMTDLVQ--------GEFMQLG---SKETENER-FAHYLTKTYR 104
K+ + + + Q G+ E E F +YL KTY
Sbjct: 301 KSIPQPTGKVPTKLHQYSVQQQQRTTNGGNGGDSADAAVVVDHEINVEAAFEYYLHKTYL 360
Query: 105 KTASLIANCVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAA 164
KTASL++ +A+A+L GA D + E +++GRNLG+ FQ+VDD+LD+ SS +GKP+ A
Sbjct: 361 KTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTSSDKTIGKPSQA 420
Query: 165 DLKLGLATAPVLFACEKSAMLG 186
DLKLGLATAP+LFA ++ LG
Sbjct: 421 DLKLGLATAPILFAWKQEPKLG 442
Score = 299 (110.3 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 60/119 (50%), Positives = 84/119 (70%)
Query: 167 KLGLATAPVLF-ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGK 225
K L TA ++ +C +A+L GA D + E +++GRNLG+ FQ+VDD+LD+ SS +GK
Sbjct: 357 KTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTSSDKTIGK 416
Query: 226 PTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLA 284
P+ ADLKLGLATAP+LFA ++ P+L +I R+F +PGDVE A V K G+ QTK +A
Sbjct: 417 PSQADLKLGLATAPILFAWKQEPKLGDLIARKFNQPGDVEIARRAVEKYDGVAQTKEMA 475
Score = 39 (18.8 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 115 KASAMLGGA--DDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLG 169
K ++ + G DD LS +A +G N + + +D + + KP D G
Sbjct: 133 KQNSTIAGKSIDDSLSPLAILHGINPKVILDPLSKPMDKLPIINGHNKPGDKDNSQG 189
>UNIPROTKB|I3LJ49 [details] [associations]
symbol:I3LJ49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Ensembl:ENSSSCT00000027318 OMA:NNCISEQ
Uniprot:I3LJ49
Length = 145
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 57/108 (52%), Positives = 82/108 (75%)
Query: 180 EKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAP 239
E+ ++LG D + E+A++YG+N+GIAFQL+DD+LDF S SD MGK LAT P
Sbjct: 14 EQVSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGK--------XLATGP 65
Query: 240 VLFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKH 287
VLFAC++FPE+N MIMRRF PGDV++A ++V +S G++QT +LA+++
Sbjct: 66 VLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQRY 113
Score = 173 (66.0 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 36/71 (50%), Positives = 49/71 (69%)
Query: 112 NCVKAS-AMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGL 170
NC+ ++LG D + E+A++YG+N+GIAFQL+DD+LDF S SD MGK L
Sbjct: 10 NCISEQVSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGK--------XL 61
Query: 171 ATAPVLFACEK 181
AT PVLFAC++
Sbjct: 62 ATGPVLFACQQ 72
>DICTYBASE|DDB_G0280293 [details] [associations]
symbol:coq1 "trans-prenyltransferase" species:44689
"Dictyostelium discoideum" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0006743 "ubiquinone metabolic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
dictyBase:DDB_G0280293 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GenomeReviews:CM000152_GR
GO:GO:0046872 EMBL:AAFI02000035 GO:GO:0006744 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0006743 RefSeq:XP_641356.1 HSSP:Q9WY08
ProteinModelPortal:Q54VJ9 STRING:Q54VJ9 EnsemblProtists:DDB0231590
GeneID:8622490 KEGG:ddi:DDB_G0280293 OMA:RIRPTIV Uniprot:Q54VJ9
Length = 456
Score = 294 (108.6 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 55/107 (51%), Positives = 80/107 (74%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 237
+C +A+L GAD + ++ E+G+NLG+AFQ+VDDLLD+ S++ GK T+ DL LGLAT
Sbjct: 315 SCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGLAT 374
Query: 238 APVLFACEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLA 284
APVL+A ++FP+L +I R+F E GDVE+A V S+G+E+T+ LA
Sbjct: 375 APVLYATQEFPQLEKLIKRKFSEIGDVEEAKRLVALSKGIEKTRNLA 421
Score = 292 (107.8 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 57/120 (47%), Positives = 82/120 (68%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+ C+ + +LV+GEFMQ S + F +YL KTY KT SLI N +++A+L GAD
Sbjct: 270 VTECMSTALAELVEGEFMQAKSNGVVS--FDNYLQKTYLKTGSLITNSCRSAAILSGADS 327
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAML 185
+ ++ E+G+NLG+AFQ+VDDLLD+ S++ GK T+ DL LGLATAPVL+A ++ L
Sbjct: 328 NIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFPQL 387
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+ GD++LA A ++S +R+ DVT +S + +LV+GEFMQ S + F +YL KTY
Sbjct: 249 LCGDYLLARASVVLSTIRNPDVTECMSTALAELVEGEFMQAKSNGVVS--FDNYLQKTYL 306
Query: 61 KTASLIAN-CVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAM 119
KT SLI N C A + + + ++ +N A + C KA+++
Sbjct: 307 KTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSV 366
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 191 (72.3 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 46/122 (37%), Positives = 68/122 (55%)
Query: 172 TAPVLFA-CEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAAD 230
TA +L A CE A+LG + + E ++G +LGIAFQL+DD LD+ +S + GK D
Sbjct: 169 TAVLLSAACEAGAILGTSSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHD 228
Query: 231 LKLGLATAPV---LFAC--EKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLAR 285
L+ G T P+ L C E+ + ++ + EPGD E F VHK G+E T +A
Sbjct: 229 LEEGKITLPLIHTLMKCSDEERETIAAVVEKEILEPGDFESVFTLVHKYGGIEYTVSVAN 288
Query: 286 KH 287
++
Sbjct: 289 EY 290
Score = 158 (60.7 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 40/119 (33%), Positives = 61/119 (51%)
Query: 66 IANCVKAIMTDLVQGEFMQL---GSKETENERFAHYLTKTYRKTASLIANCVKASAMLGG 122
I + T + +GE +QL E ER Y+ KTA L++ +A A+LG
Sbjct: 129 ILKVISGATTIIAEGEVLQLLCTSDLEMTQER---YIEVVKSKTAVLLSAACEAGAILGT 185
Query: 123 ADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
+ + E ++G +LGIAFQL+DD LD+ +S + GK DL+ G T P++ K
Sbjct: 186 SSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIHTLMK 244
Score = 57 (25.1 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQL---GSKETENERFAHYLTK 57
+ GDF+ + + ++ D + +S T + +GE +QL E ER Y+
Sbjct: 108 LVGDFLFSKSFSLMVEAGDLRILKVISGATTIIAEGEVLQLLCTSDLEMTQER---YIEV 164
Query: 58 TYRKTASLIANCVKA 72
KTA L++ +A
Sbjct: 165 VKSKTAVLLSAACEA 179
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 198 (74.8 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 39/111 (35%), Positives = 65/111 (58%)
Query: 74 MTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAFE 133
+ ++ GE Q+ K + YL + RKTA LIA + A+ GAD+K+ + +
Sbjct: 167 IVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYW 226
Query: 134 YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAM 184
+G +G+++Q++DD+LDF S+ + +GKP DL G T PVL+A + A+
Sbjct: 227 FGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALKNPAL 277
Score = 162 (62.1 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 34/106 (32%), Positives = 62/106 (58%)
Query: 175 VLFACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLG 234
+ +C+ A+ GAD+K+ + + +G +G+++Q++DD+LDF S+ + +GKP DL G
Sbjct: 203 IAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQG 262
Query: 235 LATAPVLFACEKFPEL-NPMIMRRFQEPGD-VEKAFEFVHKSQGLE 278
T PVL+A K P L N + + + + +E E + K+ +E
Sbjct: 263 NVTLPVLYAL-KNPALKNQLKLINSETTQEQLEPIIEEIKKTDAIE 307
Score = 97 (39.2 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 3 GDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKT 62
GD++LA + +M++R+ + LSQ + ++ GE Q+ K + YL + RKT
Sbjct: 140 GDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKT 199
Query: 63 ASLIA-NC 69
A LIA +C
Sbjct: 200 ALLIAVSC 207
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 185 (70.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 36/116 (31%), Positives = 61/116 (52%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+A + + + GE QL + + YL K RKTA L++ + ++
Sbjct: 136 VAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMANVSP 195
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
++ +YG +G+AFQ++DD+LDF + +GKP +DL+ GL T PVL A ++
Sbjct: 196 RVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKR 251
Score = 155 (59.6 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 37/125 (29%), Positives = 65/125 (52%)
Query: 166 LKLGLATAPVLFA-CEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMG 224
+K+ TA +L A CE ++ ++ +YG +G+AFQ++DD+LDF + +G
Sbjct: 170 IKIKRKTALLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLG 229
Query: 225 KPTAADLKLGLATAPVLFAC--EKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKF 282
KP +DL+ GL T PVL A +K EL + Q ++E+ + + G+ +
Sbjct: 230 KPVGSDLRQGLITLPVLLALKRDKKHELWRELQNLPQNNANIEQIIKEIKYLGGISEAYA 289
Query: 283 LARKH 287
A+ +
Sbjct: 290 WAKNY 294
Score = 88 (36.0 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 3 GDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKT 62
GD I A + +I ++N V L+++ + GE QL + + YL K RKT
Sbjct: 117 GDRIFAKSLLLIDSCKNNYVAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKT 176
Query: 63 ASLI-ANC 69
A L+ A+C
Sbjct: 177 ALLLSASC 184
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 185 (70.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 36/116 (31%), Positives = 61/116 (52%)
Query: 66 IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADD 125
+A + + + GE QL + + YL K RKTA L++ + ++
Sbjct: 136 VAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMANVSP 195
Query: 126 KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
++ +YG +G+AFQ++DD+LDF + +GKP +DL+ GL T PVL A ++
Sbjct: 196 RVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKR 251
Score = 155 (59.6 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 37/125 (29%), Positives = 65/125 (52%)
Query: 166 LKLGLATAPVLFA-CEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMG 224
+K+ TA +L A CE ++ ++ +YG +G+AFQ++DD+LDF + +G
Sbjct: 170 IKIKRKTALLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLG 229
Query: 225 KPTAADLKLGLATAPVLFAC--EKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKF 282
KP +DL+ GL T PVL A +K EL + Q ++E+ + + G+ +
Sbjct: 230 KPVGSDLRQGLITLPVLLALKRDKKHELWRELQNLPQNNANIEQIIKEIKYLGGISEAYA 289
Query: 283 LARKH 287
A+ +
Sbjct: 290 WAKNY 294
Score = 88 (36.0 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 3 GDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKT 62
GD I A + +I ++N V L+++ + GE QL + + YL K RKT
Sbjct: 117 GDRIFAKSLLLIDSCKNNYVAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKT 176
Query: 63 ASLI-ANC 69
A L+ A+C
Sbjct: 177 ALLLSASC 184
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 197 (74.4 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 60/211 (28%), Positives = 99/211 (46%)
Query: 51 FAHYLTKTYRKTASL-IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASL 109
FAH + +T ++ I + + GE Q + ++ + +YL + KTA+L
Sbjct: 119 FAH-AAEVAAETDNMRIVTLFAQTLQIIASGELKQAYASFNPDQSYENYLERISGKTAAL 177
Query: 110 IANCVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLG 169
K A+L A E+ YG NLG++FQ+VDD+LDF+ ++ MGKP +DL G
Sbjct: 178 FVMATKGGAILADASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGKPVGSDLNNG 237
Query: 170 LATAPVLFACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVD--DLLDFISSSDAMGKPT 227
T P L ++ D L A + ++ A ++++ D++D +S +A
Sbjct: 238 TVTLPALLLMDRYPENNPIKDMLG--ATDRSAHVARAVEMINSSDIID-LSYKEAK---R 291
Query: 228 AADLKL-GLATAPVLFACEKFPELNPMIMRR 257
ADL L+ P A E +L I+ R
Sbjct: 292 YADLACQDLSKLPKTAARESLYQLAEFIVER 322
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 192 (72.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 51/167 (30%), Positives = 85/167 (50%)
Query: 27 SQIMTDLVQGEFMQLGSKETE---NERFAHYLTK-TYRKTASLIAN--------CVKAIM 74
S + D++ F++ GS +R A Y + K+ I N + +
Sbjct: 80 SLVHDDVIDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQALSHTI 139
Query: 75 TDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGAD-DKLSEVAFE 133
++ +GE Q+ K ++ YL + RKTA LIA + A+ GA+ D +S + F
Sbjct: 140 LEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRL-FW 198
Query: 134 YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 180
YG +G+++Q++DD+LDF+S+ + +GKP DL G T P L+A E
Sbjct: 199 YGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAME 245
Score = 145 (56.1 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 172 TAPVLFA-CEKSAMLGGAD-DKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAA 229
TA ++ A C+ A+ GA+ D +S + F YG +G+++Q++DD+LDF+S+ + +GKP
Sbjct: 171 TALLIAASCQLGAIAAGANRDTVSRL-FWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGG 229
Query: 230 DLKLGLATAPVLFACE 245
DL G T P L+A E
Sbjct: 230 DLLQGNITLPALYAME 245
Score = 84 (34.6 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 3 GDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKT 62
GD++ A + + I+ + + LS + ++ +GE Q+ K ++ YL + RKT
Sbjct: 112 GDYLFAKSLECITNIEIPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKT 171
Query: 63 ASLIA-NC 69
A LIA +C
Sbjct: 172 ALLIAASC 179
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 184 (69.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 50/130 (38%), Positives = 68/130 (52%)
Query: 52 AHY-LTKTYRKTASLIANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLI 110
A Y L+K + AS+I++ V L GE M + E N YL Y KTA LI
Sbjct: 101 AFYELSKMDARFASIISDAV----VKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLI 156
Query: 111 ANCVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGL 170
+ A+L G +K + A EYG+NLG+AFQ++DD+LD S +GKP D K G
Sbjct: 157 EASARCGAILAGLYEK--DFA-EYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGK 213
Query: 171 ATAPVLFACE 180
T P ++ E
Sbjct: 214 TTLPYIYLYE 223
Score = 140 (54.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 38/106 (35%), Positives = 52/106 (49%)
Query: 145 VDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAMLGGADDKLSEVAF-EYGRNL 203
+ +L+D + + A LK+ VL E SA G L E F EYG+NL
Sbjct: 125 IGELMD-VDLGEKFNINKEAYLKMIYNKTAVLI--EASARCGAILAGLYEKDFAEYGKNL 181
Query: 204 GIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPE 249
G+AFQ++DD+LD S +GKP D K G T P ++ E E
Sbjct: 182 GLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQE 227
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 182 (69.1 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 59/204 (28%), Positives = 100/204 (49%)
Query: 25 TLSQIMTDLVQGEFMQLGSKETENERFAH--------YL-TKTYRKTASLIANCVKAIM- 74
T + + D+V M+ G +ET N F + +L T++++ L + I+
Sbjct: 82 TATLLHDDVVDESNMRRG-RETANALFGNSASVLVGDFLYTRSFQMMTKLGDMRIMDILS 140
Query: 75 --TDLV-QGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVA 131
T++V +GE +QL + + Y+ Y KTA L + +A++ D K+ +
Sbjct: 141 EATNIVAEGEVLQLMNCNDASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAM 200
Query: 132 FEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAMLGGADDK 191
+YG+ LG AFQLVDD++D+ + + MGK DL G T P+L+A + A K
Sbjct: 201 ADYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLYAMKHG---NEAQQK 257
Query: 192 LSEVAFEYGR---NLGIAFQLVDD 212
L + A E G NL + Q +++
Sbjct: 258 LIKEAIELGNGMDNLELILQAMEE 281
Score = 145 (56.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 38/135 (28%), Positives = 69/135 (51%)
Query: 147 DLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK-SAMLGGADDKLSEVAFEYGRNLGI 205
++L ++ +DA + + TA + A + +A++ D K+ + +YG+ LG
Sbjct: 150 EVLQLMNCNDASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAMADYGKYLGT 209
Query: 206 AFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEPGDVE 265
AFQLVDD++D+ + + MGK DL G T P+L+A + E +++ E G+
Sbjct: 210 AFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLYAMKHGNEAQQKLIKEAIELGNGM 269
Query: 266 KAFEFVHKSQGLEQT 280
E + Q +E+T
Sbjct: 270 DNLELI--LQAMEET 282
>GENEDB_PFALCIPARUM|PFB0130w [details] [associations]
symbol:PFB0130w "polyprenyl synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 184 (69.8 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 41/107 (38%), Positives = 61/107 (57%)
Query: 73 IMTDLVQGEFMQLGSK-ETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVA 131
++ L++GEF+Q K E YL K+Y KTASL ++ A+L +D + ++
Sbjct: 338 VVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACIAILSFKNDTIIQLC 397
Query: 132 FEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 178
F G ++G+AFQL DD LD+ D KP DLK + TAP+LF+
Sbjct: 398 FNLGLHIGMAFQLYDDYLDY-KIDDNTNKPILNDLKNNIKTAPLLFS 443
>UNIPROTKB|O96130 [details] [associations]
symbol:OPP "Octaprenyl pyrophosphate synthase"
species:36329 "Plasmodium falciparum 3D7" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 184 (69.8 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 41/107 (38%), Positives = 61/107 (57%)
Query: 73 IMTDLVQGEFMQLGSK-ETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVA 131
++ L++GEF+Q K E YL K+Y KTASL ++ A+L +D + ++
Sbjct: 338 VVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACIAILSFKNDTIIQLC 397
Query: 132 FEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 178
F G ++G+AFQL DD LD+ D KP DLK + TAP+LF+
Sbjct: 398 FNLGLHIGMAFQLYDDYLDY-KIDDNTNKPILNDLKNNIKTAPLLFS 443
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 179 (68.1 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 41/128 (32%), Positives = 72/128 (56%)
Query: 74 MTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAFE 133
+ ++ +GE Q+ K ++ YL + RKTA LIA + A+ GA + + + +
Sbjct: 139 IVEVCRGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLGALAAGAPEPIVKRLYW 198
Query: 134 YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE----KSAMLG-GA 188
+G +G++FQ+ DD+LDF + + +GKP +DL G T PVL+A K+A+ G
Sbjct: 199 FGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLYALSDERVKAAIAAVGP 258
Query: 189 DDKLSEVA 196
+ ++E+A
Sbjct: 259 ETDVAEMA 266
Score = 139 (54.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 172 TAPVLFA-CEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAAD 230
TA ++ A C+ A+ GA + + + + +G +G++FQ+ DD+LDF + + +GKP +D
Sbjct: 171 TALLIAASCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSD 230
Query: 231 LKLGLATAPVLFA 243
L G T PVL+A
Sbjct: 231 LLQGNVTLPVLYA 243
Score = 75 (31.5 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 19/68 (27%), Positives = 37/68 (54%)
Query: 3 GDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKT 62
GD++ A + + ++ L + L++ + ++ +GE Q+ K ++ YL + RKT
Sbjct: 112 GDYLFARSLERMAELGNPRAHQVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRRIRRKT 171
Query: 63 ASLIA-NC 69
A LIA +C
Sbjct: 172 ALLIAASC 179
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 177 (67.4 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 52/167 (31%), Positives = 82/167 (49%)
Query: 25 TLSQIMTDLVQGEFMQLGSKETENERFAH--------YL-TKTYRKTASLIANCVKAIMT 75
T S + D+V ++ G +ET N F + +L T++++ L + V ++
Sbjct: 86 TASLLHDDVVDESTLRRG-RETANALFGNSASVLVGDFLYTRSFQMMTELDSMRVLRVLA 144
Query: 76 D----LVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVA 131
D L +GE +QL + + Y+ Y KTA L +A+L GA +
Sbjct: 145 DTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASPEQETAL 204
Query: 132 FEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 178
+YG+ LG AFQL DDLLD+ + SD +GK DL G T P+++A
Sbjct: 205 GDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIYA 251
Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 37/104 (35%), Positives = 54/104 (51%)
Query: 182 SAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVL 241
+A+L GA + +YG+ LG AFQL DDLLD+ + SD +GK DL G T P++
Sbjct: 190 AAVLAGASPEQETALGDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLI 249
Query: 242 FACEKFPELNPMIMRRFQEPGD----VEKAFEFVHKSQGLEQTK 281
+A E ++R+ E GD +EK +H L T+
Sbjct: 250 YAIAHGTEEEKQLIRQAIEQGDGTHAIEKIVAALHHCGALNYTQ 293
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 174 (66.3 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 49/146 (33%), Positives = 78/146 (53%)
Query: 56 TKTYRKTASLIANCVKAIMTDLV----QGEFMQLGSKETENERFAHYLTKTYRKTASLIA 111
T++++ L + + +M+D V +GE QL + + A Y+ Y KTA L
Sbjct: 142 TRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFE 201
Query: 112 NCVKASAMLGGADDKLSEVAFE-YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGL 170
+ A+L A ++ E+A + YG+ LG AFQL+DD++D+ S D MGK DL G
Sbjct: 202 AATQIGAILCDASPEV-ELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGK 260
Query: 171 ATAPVLFAC-----EKSAMLGGADDK 191
T P+L+A E++AM+ A +K
Sbjct: 261 PTLPLLYAMQHGNPEQAAMIREAIEK 286
Score = 137 (53.3 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 178 ACEKSAMLGGADDKLSEVAFE-YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLA 236
A + A+L A ++ E+A + YG+ LG AFQL+DD++D+ S D MGK DL G
Sbjct: 203 ATQIGAILCDASPEV-ELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKP 261
Query: 237 TAPVLFACEKF-PELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQT 280
T P+L+A + PE MI ++ + + E + +EQT
Sbjct: 262 TLPLLYAMQHGNPEQAAMIREAIEKANGMSRLNEIL---AAMEQT 303
Score = 81 (33.6 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+ GDFI + QM++ L + +S + + +GE QL + + A Y+ Y
Sbjct: 135 LVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYS 194
Query: 61 KTASLI--ANCVKAIMTD 76
KTA L A + AI+ D
Sbjct: 195 KTARLFEAATQIGAILCD 212
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 174 (66.3 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 49/146 (33%), Positives = 78/146 (53%)
Query: 56 TKTYRKTASLIANCVKAIMTDLV----QGEFMQLGSKETENERFAHYLTKTYRKTASLIA 111
T++++ L + + +M+D V +GE QL + + A Y+ Y KTA L
Sbjct: 142 TRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFE 201
Query: 112 NCVKASAMLGGADDKLSEVAFE-YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGL 170
+ A+L A ++ E+A + YG+ LG AFQL+DD++D+ S D MGK DL G
Sbjct: 202 AATQIGAILCDASPEV-ELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGK 260
Query: 171 ATAPVLFAC-----EKSAMLGGADDK 191
T P+L+A E++AM+ A +K
Sbjct: 261 PTLPLLYAMQHGNPEQAAMIREAIEK 286
Score = 137 (53.3 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 178 ACEKSAMLGGADDKLSEVAFE-YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLA 236
A + A+L A ++ E+A + YG+ LG AFQL+DD++D+ S D MGK DL G
Sbjct: 203 ATQIGAILCDASPEV-ELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKP 261
Query: 237 TAPVLFACEKF-PELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQT 280
T P+L+A + PE MI ++ + + E + +EQT
Sbjct: 262 TLPLLYAMQHGNPEQAAMIREAIEKANGMSRLNEIL---AAMEQT 303
Score = 81 (33.6 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+ GDFI + QM++ L + +S + + +GE QL + + A Y+ Y
Sbjct: 135 LVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYS 194
Query: 61 KTASLI--ANCVKAIMTD 76
KTA L A + AI+ D
Sbjct: 195 KTARLFEAATQIGAILCD 212
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 145 (56.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 36/117 (30%), Positives = 64/117 (54%)
Query: 175 VLF--ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLK 232
VLF ACE +A+L ++G N GI FQ++DD+LD+ ++ + +GK T D+
Sbjct: 168 VLFSAACESAAVLHDVGTLQRNALRDWGFNFGIVFQILDDILDYTANQNELGKRTYNDIV 227
Query: 233 LGLATAPVLFACEKFPELNPMIMRRF--QEPGDVEKAFEFVHKSQGLEQTKFLARKH 287
G T P++ A E E + + +R +E D + AF ++ +E++ LA+++
Sbjct: 228 SGKVTLPLIIAYEGASEKDRIGLRGALSRERPDPDLAFSYIMAQNAIEKSVGLAKEY 284
Score = 134 (52.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 77 LVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAFEYGR 136
+V GE QL + + YL KTA L + +++A+L ++G
Sbjct: 137 IVSGEMQQLVHSSSLDISRTKYLEIISSKTAVLFSAACESAAVLHDVGTLQRNALRDWGF 196
Query: 137 NLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 180
N GI FQ++DD+LD+ ++ + +GK T D+ G T P++ A E
Sbjct: 197 NFGIVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPLIIAYE 240
Score = 68 (29.0 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 24/79 (30%), Positives = 34/79 (43%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+ GDF+ A A Q I + LS + +V GE QL + + YL
Sbjct: 105 LVGDFLFATAFQWIVSCNSIQLLSVLSNTASIIVSGEMQQLVHSSSLDISRTKYLEIISS 164
Query: 61 KTASLI-ANCVKA-IMTDL 77
KTA L A C A ++ D+
Sbjct: 165 KTAVLFSAACESAAVLHDV 183
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 166 (63.5 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 51/167 (30%), Positives = 80/167 (47%)
Query: 25 TLSQIMTDLVQGEFMQLGSKETENERFAH---------YLTKTYRKTASLIANCVKAIMT 75
T + + D+V M+ G K T N F + T+ ++ SL + V +M+
Sbjct: 78 TATLLHDDVVDESDMRRG-KATANAAFGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMS 136
Query: 76 DLV----QGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVA 131
+ V +GE +QL + + +Y+ Y KTA L + S +L G + +
Sbjct: 137 EAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGL 196
Query: 132 FEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 178
+YGR LG AFQL+DDLLD+ + + +GK DL G T P+L A
Sbjct: 197 QDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHA 243
Score = 132 (51.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 39/109 (35%), Positives = 55/109 (50%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 237
A + S +L G + + +YGR LG AFQL+DDLLD+ + + +GK DL G T
Sbjct: 178 AAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPT 237
Query: 238 APVLFACEK-FPELNPMIMRRFQEPGD----VEKAFEFVHKSQGLEQTK 281
P+L A PE MI R E G+ +E E ++ LE T+
Sbjct: 238 LPLLHAMHHGTPEQAQMI-RTAIEQGNGRHLLEPVLEAMNACGSLEWTR 285
Score = 77 (32.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+ GDFI A QM++ L V +S+ + + +GE +QL + + +Y+ Y
Sbjct: 110 LVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYS 169
Query: 61 KTASL 65
KTA L
Sbjct: 170 KTARL 174
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 152 (58.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 43/133 (32%), Positives = 59/133 (44%)
Query: 54 YLTKTY-RKTASLIANCVKAI---MTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASL 109
YL T R A L V+ I LV G+ + + YL KT SL
Sbjct: 127 YLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSL 186
Query: 110 IANCVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLG 169
I + M GA D+ E G +G AFQ+ DD++D S SD GK D++ G
Sbjct: 187 IGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREG 246
Query: 170 LATAPVLFACEKS 182
+ T P+L+A +S
Sbjct: 247 VHTLPMLYALRES 259
Score = 126 (49.4 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 32/102 (31%), Positives = 51/102 (50%)
Query: 184 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 243
M GA D+ E G +G AFQ+ DD++D S SD GK D++ G+ T P+L+A
Sbjct: 196 MFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYA 255
Query: 244 C-EKFPE---LNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTK 281
E P+ L ++ + +V +A + S G+ + K
Sbjct: 256 LRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAK 297
Score = 80 (33.2 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+AGD++LA A ++++RL V + ++ LV G+ + + YL
Sbjct: 123 LAGDYLLATASRLVARLGPEAVRI-IADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQE 181
Query: 61 KTASLI 66
KT SLI
Sbjct: 182 KTGSLI 187
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 160 (61.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 56/189 (29%), Positives = 81/189 (42%)
Query: 2 AGDFILA-VACQMISRLRDNDVT--LTLSQIMTDLVQGEFMQLGSKETENERFAHY---- 54
A IL + C LR T + + + L + L ++T + FA
Sbjct: 124 ASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPER 183
Query: 55 LTKTYRKTASLIANCVKAIMTDLVQGEFMQLGSKE-TENERFAHYLTKTYRKTASLIANC 113
+ KT ++ + V DL GE M+ S E+ F H KTA+L+
Sbjct: 184 ILKTVQEMVKAVEGLVAGQQADLA-GEGMRFDSDTGLEHLEFIHI-----HKTAALLEAA 237
Query: 114 VKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATA 173
A++GG D+ E Y R +G+ FQ+VDD+LD SS+ +GK DL G T
Sbjct: 238 AVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTY 297
Query: 174 PVLFACEKS 182
P L EKS
Sbjct: 298 PRLMGVEKS 306
Score = 128 (50.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 172 TAPVLFACE-KSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAAD 230
TA +L A A++GG D+ E Y R +G+ FQ+VDD+LD SS+ +GK D
Sbjct: 230 TAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKD 289
Query: 231 LKLGLATAPVLFACEKFPE 249
L G T P L EK E
Sbjct: 290 LIAGKLTYPRLMGVEKSKE 308
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 16 RLRDNDVTLTLSQIMTDLVQGEF 38
R R NDVT L++ +T +F
Sbjct: 26 RPRYNDVTSALTRPLTSAASYDF 48
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 156 (60.0 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 43/139 (30%), Positives = 67/139 (48%)
Query: 77 LVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAFEYGR 136
L+ G+ + L S E + + L KTA LI + A +L GA ++ + +YGR
Sbjct: 154 LIAGQVVDLSSSEAKKDPEV-LLYIHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGR 212
Query: 137 NLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAMLGGAD-DKLSEV 195
+LG+AFQ+VDDLLD + +GKP +D K T LF E++ + + V
Sbjct: 213 HLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEINAAKNV 272
Query: 196 AFEYGRNLGIAFQLVDDLL 214
YG +L + +L
Sbjct: 273 LKPYGEKSSFFIKLAEFIL 291
Score = 148 (57.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 49/150 (32%), Positives = 76/150 (50%)
Query: 99 LTKTYRKTASLIANCVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAM 158
LTK + TA + + A ++ + E+A G IA Q+VD +SSS+A
Sbjct: 118 LTKAFELTAKTLEQGIPAERVVR----VIQELAVASGSEGLIAGQVVD-----LSSSEAK 168
Query: 159 GKPTAADLKLGL-ATAPVL-FACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDF 216
P L + L TA ++ ++ +L GA ++ + +YGR+LG+AFQ+VDDLLD
Sbjct: 169 KDPEVL-LYIHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDV 227
Query: 217 ISSSDAMGKPTAADLKLGLATAPVLFACEK 246
+ +GKP +D K T LF E+
Sbjct: 228 VGDFQKIGKPVGSDEKNQKLTYVSLFGIEE 257
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 156 (60.0 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 43/139 (30%), Positives = 67/139 (48%)
Query: 77 LVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAFEYGR 136
L+ G+ + L S E + + L KTA LI + A +L GA ++ + +YGR
Sbjct: 154 LIAGQVVDLSSSEAKKDPEV-LLYIHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGR 212
Query: 137 NLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAMLGGAD-DKLSEV 195
+LG+AFQ+VDDLLD + +GKP +D K T LF E++ + + V
Sbjct: 213 HLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEETKKRAEEEINAAKNV 272
Query: 196 AFEYGRNLGIAFQLVDDLL 214
YG +L + +L
Sbjct: 273 LKPYGEKSSFFIKLAEFIL 291
Score = 148 (57.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 49/150 (32%), Positives = 76/150 (50%)
Query: 99 LTKTYRKTASLIANCVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAM 158
LTK + TA + + A ++ + E+A G IA Q+VD +SSS+A
Sbjct: 118 LTKAFELTAKTLEQGIPAERVVR----VIQELAVASGSEGLIAGQVVD-----LSSSEAK 168
Query: 159 GKPTAADLKLGL-ATAPVL-FACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDF 216
P L + L TA ++ ++ +L GA ++ + +YGR+LG+AFQ+VDDLLD
Sbjct: 169 KDPEVL-LYIHLNKTARLIRYSLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDV 227
Query: 217 ISSSDAMGKPTAADLKLGLATAPVLFACEK 246
+ +GKP +D K T LF E+
Sbjct: 228 VGDFQKIGKPVGSDEKNQKLTYVSLFGIEE 257
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 155 (59.6 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 34/107 (31%), Positives = 56/107 (52%)
Query: 76 DLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAFEYG 135
D++ GE Q+ S N Y+ KTA+L + +++A L ++ E +G
Sbjct: 147 DVIVGEVQQMISSHNINISKEKYIEIISAKTAALFSATCESAANLAQTSNEEKEALKNFG 206
Query: 136 RNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKS 182
N GI+FQ++DD+LD+ +S + GK DL G T PV+ A + +
Sbjct: 207 NNFGISFQIMDDILDYTASGEQFGKKLGNDLLTGKTTLPVIIAYQNA 253
Score = 147 (56.8 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 52/194 (26%), Positives = 93/194 (47%)
Query: 105 KTASLI-ANCVKASAMLGGADDKLSEVAFEY---GRNLGIAFQL--------VDDLLDFI 152
KT+++I N KAS ++G D L ++F++ +NL I L V ++ I
Sbjct: 103 KTSNVIWGN--KASILVG---DFLLAISFQWLIKCKNLNILSILSQASKDVIVGEVQQMI 157
Query: 153 SSSDA-MGKPTAADLKLGLATAPVLFA-CEKSAMLGGADDKLSEVAFEYGRNLGIAFQLV 210
SS + + K ++ + TA + A CE +A L ++ E +G N GI+FQ++
Sbjct: 158 SSHNINISKEKYIEI-ISAKTAALFSATCESAANLAQTSNEEKEALKNFGNNFGISFQIM 216
Query: 211 DDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEPGDVEKAFEF 270
DD+LD+ +S + GK DL G T PV+ A + + ++E+A +
Sbjct: 217 DDILDYTASGEQFGKKLGNDLLTGKTTLPVIIAYQNATSKEKKFWDQISVNPNLEQAISY 276
Query: 271 VHKSQGLEQTKFLA 284
+ +E++ +A
Sbjct: 277 IKVHNAIEKSISIA 290
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 155 (59.6 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 40/126 (31%), Positives = 68/126 (53%)
Query: 71 KAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLI-ANCVKASAMLGGADDKLSE 129
K I+ ++ GEF Q+ + F YL + RKTA LI A+C A+ D++ +
Sbjct: 137 KTIL-EVCFGEFDQMADRFNYPVSFTAYLRRINRKTAILIEASC-HLGALSSQLDEQSTY 194
Query: 130 VAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAMLGGAD 189
++G +G+++Q++DD+LD+ S +GKP +D++ G T P++ A + D
Sbjct: 195 HIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIAN--LKEQDD 252
Query: 190 DKLSEV 195
DKL V
Sbjct: 253 DKLEAV 258
Score = 133 (51.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 35/149 (23%), Positives = 75/149 (50%)
Query: 150 DFISSSDAMGKP---TAADLKLGLATAPVLFA-CEKSAMLGGADDKLSEVAFEYGRNLGI 205
+F +D P TA ++ TA ++ A C A+ D++ + ++G +G+
Sbjct: 146 EFDQMADRFNYPVSFTAYLRRINRKTAILIEASCHLGALSSQLDEQSTYHIKQFGHCIGM 205
Query: 206 AFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELNP----MIMRRFQEP 261
++Q++DD+LD+ S +GKP +D++ G T P++ A E + +++
Sbjct: 206 SYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIANLKEQDDDKLEAVVKHLTST 265
Query: 262 GDVEKAFEFVH---KSQGLEQTKFLARKH 287
D ++ ++++ K G+E + L+RK+
Sbjct: 266 SD-DEVYQYIVSQVKQYGIEPAELLSRKY 293
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 151 (58.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 84 QLGSKETENERFAHYLTKTY---RKTASLIANCVKASAMLGGADDKLSEVAFEYGRNLGI 140
Q+ E+E + T Y RKT +LI +KA A+LGGA+ + YG +G+
Sbjct: 159 QVVDMESEGNKEIDLATVQYIHTRKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGL 218
Query: 141 AFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKS 182
AFQ+ DD+LD +++ +GK +D G AT P + +S
Sbjct: 219 AFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVLGLAES 260
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00027
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 172 TAPVLFACEKS-AMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAAD 230
T ++ A K+ A+LGGA+ + YG +G+AFQ+ DD+LD +++ +GK +D
Sbjct: 184 TGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSD 243
Query: 231 LKLGLATAPVLFACEKFPELNPMIMRRFQEPGD--VEKAFEFVHKSQGLEQ 279
G AT P + + RR QE D +E F H++ L +
Sbjct: 244 EARGKATYPAVLGLAESK-------RRAQELLDLAIEALSPFDHRADPLRE 287
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 151 (58.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 84 QLGSKETENERFAHYLTKTY---RKTASLIANCVKASAMLGGADDKLSEVAFEYGRNLGI 140
Q+ E+E + T Y RKT +LI +KA A+LGGA+ + YG +G+
Sbjct: 159 QVVDMESEGNKEIDLATVQYIHTRKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGL 218
Query: 141 AFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKS 182
AFQ+ DD+LD +++ +GK +D G AT P + +S
Sbjct: 219 AFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVLGLAES 260
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00027
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 172 TAPVLFACEKS-AMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAAD 230
T ++ A K+ A+LGGA+ + YG +G+AFQ+ DD+LD +++ +GK +D
Sbjct: 184 TGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSD 243
Query: 231 LKLGLATAPVLFACEKFPELNPMIMRRFQEPGD--VEKAFEFVHKSQGLEQ 279
G AT P + + RR QE D +E F H++ L +
Sbjct: 244 EARGKATYPAVLGLAESK-------RRAQELLDLAIEALSPFDHRADPLRE 287
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 152 (58.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/170 (30%), Positives = 78/170 (45%)
Query: 19 DNDVTLTLSQIMTDLVQGEFMQ-LGSKETENERFAHYLTK--TYRKTASLIANCVKAIMT 75
DND L + T V GE + L + F H T + + + ++I T
Sbjct: 170 DND-DLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTTAEISSERMVWAVRELARSIGT 228
Query: 76 -DLVQGEFMQLGSKETE-NERFAHYLTKTY-RKTASLIANCVKASAMLGGADDKLSEVAF 132
LV G+ M + S+ + NE +L + KTA L+ A++GG D+ E
Sbjct: 229 RGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVR 288
Query: 133 EYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKS 182
++ R +G+ FQ+VDD+LD SS+ +GK D G T P L EKS
Sbjct: 289 KFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLIGLEKS 338
Score = 121 (47.7 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 170 LATAPVLFACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAA 229
L TA VL A++GG D+ E ++ R +G+ FQ+VDD+LD SS+ +GK
Sbjct: 266 LETAAVL-----GAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGK 320
Query: 230 DLKLGLATAPVLFACEKFPE 249
D G T P L EK E
Sbjct: 321 DQLAGKLTYPKLIGLEKSKE 340
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 148 (57.2 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 35/104 (33%), Positives = 54/104 (51%)
Query: 79 QGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAFEYGRNL 138
+G+ + +ET + A YL KT +LI + A+ GA ++ ++ E G N
Sbjct: 140 RGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEKMMGEVGMNA 199
Query: 139 GIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKS 182
GIAFQ+ DD+L I GKP DL+ G T V++A +K+
Sbjct: 200 GIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVKKA 243
Score = 130 (50.8 bits), Expect = 5.8e-06, P = 5.7e-06
Identities = 48/162 (29%), Positives = 78/162 (48%)
Query: 127 LSEVAFEYGRNLGIAFQLV-DDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAML 185
LSE A + R G A+ ++ ++ D + +D + LK G A + A A+
Sbjct: 131 LSEAAIQISR--GQAYDMLFEETWD-VDVADYLNM---VRLKTG---ALIEAAARIGAVA 181
Query: 186 GGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 245
GA ++ ++ E G N GIAFQ+ DD+L I GKP DL+ G T V++A +
Sbjct: 182 AGAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVK 241
Query: 246 KFP--ELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLAR 285
K E+ +I + E D+++A + S L+ + AR
Sbjct: 242 KAGRREIVDLIGPKASED-DLKRAASIIVDSGALDYAESRAR 282
>UNIPROTKB|P0A5H8 [details] [associations]
symbol:MT3506 "(2E,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IDA] [GO:0033386 "geranylgeranyl
diphosphate biosynthetic process" evidence=IDA] [GO:0040007
"growth" evidence=IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00766 GO:GO:0005737
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0005506 GO:GO:0016126
GO:GO:0030145 EMBL:BX842582 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 PIR:C70735 RefSeq:NP_338029.1
RefSeq:YP_006516883.1 RefSeq:YP_177970.1 ProteinModelPortal:P0A5H8
SMR:P0A5H8 EnsemblBacteria:EBMYCT00000003545
EnsemblBacteria:EBMYCT00000069473 GeneID:13317001 GeneID:887919
GeneID:926589 KEGG:mtc:MT3506 KEGG:mtu:Rv3398c KEGG:mtv:RVBD_3398c
PATRIC:18129451 TubercuList:Rv3398c HOGENOM:HOG000009101 KO:K13787
OMA:RMAPLES ProtClustDB:CLSK799990 BioCyc:MetaCyc:MONOMER-15280
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 Uniprot:P0A5H8
Length = 359
Score = 148 (57.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 76 DLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAFEYG 135
+L++G+ + + L KTA+L+A + A+L GA + E YG
Sbjct: 172 ELIRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYG 231
Query: 136 RNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAMLG 186
R++G+AFQLVDDLL + GKP +DL+ T PV + G
Sbjct: 232 RHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAG 282
Score = 129 (50.5 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 172 TAPVLFA-CEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAAD 230
TA ++ A E A+L GA + E YGR++G+AFQLVDDLL + GKP +D
Sbjct: 202 TAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSD 261
Query: 231 LKLGLATAPV 240
L+ T PV
Sbjct: 262 LRSRKKTLPV 271
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 147 (56.8 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 55/181 (30%), Positives = 82/181 (45%)
Query: 51 FAHYLTKTYRKTASLIANCV----KAIMTD-LVQGEFMQL-----GSKETENERFAHYLT 100
F H + T T S I V K+I T+ LV G+ + S E F H
Sbjct: 195 FEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHV-- 252
Query: 101 KTYRKTASLIANCVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGK 160
KTA+L+ + V A+LGG + E + R +G+ FQ+VDD+LD SS+ +GK
Sbjct: 253 ---HKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGK 309
Query: 161 PTAADLKLGLATAPVLFACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSS 220
DL + T P L EK+ ++ ++ E G + A L+ L D+I+
Sbjct: 310 TAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLE-GFDSRKAAPLIA-LADYIAYR 367
Query: 221 D 221
D
Sbjct: 368 D 368
Score = 115 (45.5 bits), Expect = 0.00040, P = 0.00040
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 183 AMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLF 242
A+LGG + E + R +G+ FQ+VDD+LD SS+ +GK DL + T P L
Sbjct: 267 AILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLL 326
Query: 243 ACEKFPELNPMIMRRFQE 260
EK E + R ++
Sbjct: 327 GLEKAKEFAAELNREAKQ 344
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 147 (56.8 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 40/121 (33%), Positives = 67/121 (55%)
Query: 66 IANCVKAIMTD-LVQGEFMQLGSKETE-NERFAHYLTKTY-RKTASLI-ANCVKASAMLG 121
+ KAI T+ LV G+ + + S+ + N+ +L + KTA+L+ A+ V + + G
Sbjct: 214 VGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGG 273
Query: 122 GADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 181
G+DD++ + ++ R +G+ FQ+VDD+LD SS +GK DL T P + EK
Sbjct: 274 GSDDEIERLR-KFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEK 332
Query: 182 S 182
S
Sbjct: 333 S 333
Score = 116 (45.9 bits), Expect = 0.00031, P = 0.00031
Identities = 42/139 (30%), Positives = 68/139 (48%)
Query: 127 LSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAMLG 186
+ E+A G +A Q+VD + + +D +G + L TA +L E SA+LG
Sbjct: 214 VGELAKAIGTEGLVAGQVVDISSEGLDLND-VGLEHLEFIHLH-KTAALL---EASAVLG 268
Query: 187 -----GADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVL 241
G+DD++ + ++ R +G+ FQ+VDD+LD SS +GK DL T P +
Sbjct: 269 AIVGGGSDDEIERLR-KFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKI 327
Query: 242 FACEKFPELNPMIMRRFQE 260
EK E + R ++
Sbjct: 328 MGLEKSREFAEKLNREARD 346
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 146 (56.5 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 39/125 (31%), Positives = 60/125 (48%)
Query: 75 TDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAFEY 134
T++ +G+ + + + + YL KTA L A A+L G+DD+ E Y
Sbjct: 163 TEICEGQALDVDFENRSDVTTEEYLEMVEFKTAVLYAAAASIPAILLGSDDETVEALHGY 222
Query: 135 GRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAMLGG-ADDKLS 193
G ++G AFQ+ DDLLD + SD +GK +DL T L A ++ + G D S
Sbjct: 223 GLDIGRAFQIQDDLLDLTAPSDELGKQRGSDLVENKRTVITLHARDQGIDVEGLVSDDPS 282
Query: 194 EVAFE 198
+ E
Sbjct: 283 DAEIE 287
Score = 127 (49.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/119 (32%), Positives = 60/119 (50%)
Query: 149 LDFISSSDAMGKPTAADLKLGLATAPVLFACEKS--AMLGGADDKLSEVAFEYGRNLGIA 206
+DF + SD T L++ VL+A S A+L G+DD+ E YG ++G A
Sbjct: 173 VDFENRSDVT---TEEYLEMVEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRA 229
Query: 207 FQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELNPMIMRRFQEPGDVE 265
FQ+ DDLLD + SD +GK +DL T L A ++ ++ ++ +P D E
Sbjct: 230 FQIQDDLLDLTAPSDELGKQRGSDLVENKRTVITLHARDQGIDVEGLVS---DDPSDAE 285
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 117 SAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSS 155
+A+L G D L AFEY + G + + LD ++++
Sbjct: 125 TAILAG--DTLYSKAFEYMLDTGAPAERSVEALDELATT 161
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 143 (55.4 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 61 KTASL-IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAM 119
+T SL + + + + +GE +Q+ + + YL KTA+L + + +
Sbjct: 133 ETGSLRVLDILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVGGV 192
Query: 120 LGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 178
+ G + FEYG LGIAFQ+ DDLLD+ + A GK D + T PV+ A
Sbjct: 193 IAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKA 251
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/142 (29%), Positives = 64/142 (45%)
Query: 147 DLLDFISSSDAMGKPTAADLKLGLATAPVLF--ACEKSAMLGGADDKLSEVAFEYGRNLG 204
++L ++SD + + L++ LF A E ++ G + FEYG LG
Sbjct: 154 EVLQMTAASD-LRTDESVYLQVVRGKTAALFSAATEVGGVIAGVPEAQVRALFEYGDALG 212
Query: 205 IAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA-CEKFPELNPMIMRRF----Q 259
IAFQ+ DDLLD+ + A GK D + T PV+ A + E +R Q
Sbjct: 213 IAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKAVAQATDEERAFWVRTIEKGKQ 272
Query: 260 EPGDVEKAFEFVHKSQGLEQTK 281
GD+E+A + K L T+
Sbjct: 273 AEGDLEQALALMEKYGTLAATR 294
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 143 (55.4 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 61 KTASL-IANCVKAIMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAM 119
+T SL + + + + +GE +Q+ + + YL KTA+L + + +
Sbjct: 133 ETGSLRVLDILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVGGV 192
Query: 120 LGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 178
+ G + FEYG LGIAFQ+ DDLLD+ + A GK D + T PV+ A
Sbjct: 193 IAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKA 251
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/142 (29%), Positives = 64/142 (45%)
Query: 147 DLLDFISSSDAMGKPTAADLKLGLATAPVLF--ACEKSAMLGGADDKLSEVAFEYGRNLG 204
++L ++SD + + L++ LF A E ++ G + FEYG LG
Sbjct: 154 EVLQMTAASD-LRTDESVYLQVVRGKTAALFSAATEVGGVIAGVPEAQVRALFEYGDALG 212
Query: 205 IAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA-CEKFPELNPMIMRRF----Q 259
IAFQ+ DDLLD+ + A GK D + T PV+ A + E +R Q
Sbjct: 213 IAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKAVAQATDEERAFWVRTIEKGKQ 272
Query: 260 EPGDVEKAFEFVHKSQGLEQTK 281
GD+E+A + K L T+
Sbjct: 273 AEGDLEQALALMEKYGTLAATR 294
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 143 (55.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 50/150 (33%), Positives = 69/150 (46%)
Query: 51 FAHYLTKTYRKTASL---IANCVKAIMTD-LVQGEFMQLGSKETE-NERFAHYLTKTY-R 104
F H T T A + I KAI + LV G+ + L S + N+ L +
Sbjct: 172 FEHLATSTAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVH 231
Query: 105 KTASLIANCVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAA 164
KTA L+ A++GG D+ E + R +G+ FQ+VDD+LD SS+ +GK
Sbjct: 232 KTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGK 291
Query: 165 DLKLGLATAPVLFACEKSAMLGGADDKLSE 194
DL T P L EKS AD LS+
Sbjct: 292 DLIADKLTYPKLMGLEKSKDF--ADKLLSD 319
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 38/121 (31%), Positives = 58/121 (47%)
Query: 127 LSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK-SAML 185
+ E+A G +A Q+VD + +D +G + + TA +L A A++
Sbjct: 190 IGELAKAIGSKGLVAGQVVDLTSGGMDQND-VGLEVLEFIHVH-KTAVLLEAATVLGAIV 247
Query: 186 GGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 245
GG D+ E + R +G+ FQ+VDD+LD SS+ +GK DL T P L E
Sbjct: 248 GGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLE 307
Query: 246 K 246
K
Sbjct: 308 K 308
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 142 (55.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 61 KTASLIANCVKAI-MTDLVQGEFMQLGSKETENERFA-HYLTKTY-RKTASLIANCVKAS 117
K + +AI T LV G+ + L S+ ++ +L + KTA+L+
Sbjct: 198 KMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLG 257
Query: 118 AMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLF 177
++GG ++ E +Y R +G+ FQ+VDD+LD S++ +GK D+ G T P L
Sbjct: 258 VIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLI 317
Query: 178 ACEKS 182
E S
Sbjct: 318 GLEGS 322
Score = 133 (51.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 37/141 (26%), Positives = 63/141 (44%)
Query: 123 ADDKLSEVAFEYGRNLGIAFQLVDDLLDFIS---SSDAMGKPTAADLKLGLATAPVLFAC 179
A +K+ E R +G + ++D S + D +G + L A + A
Sbjct: 195 APEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAA 254
Query: 180 EKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAP 239
++GG ++ E +Y R +G+ FQ+VDD+LD S++ +GK D+ G T P
Sbjct: 255 VLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYP 314
Query: 240 VLFACEKFPELNPMIMRRFQE 260
L E E+ + R +E
Sbjct: 315 RLIGLEGSREVAEKLRREAEE 335
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 142 (55.0 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 52/170 (30%), Positives = 77/170 (45%)
Query: 19 DNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTK---TYRKTASLIANCVKAIMT 75
DND L + T V GE + + S +LT+ + +K + K+I T
Sbjct: 166 DND-DLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRAVKELAKSIGT 224
Query: 76 D-LVQGEFMQLGSKETE-NERFAHYLTKTY-RKTASLIANCVKASAMLGGADDKLSEVAF 132
LV G+ L S+ E N+ L + KT SL+ A++GG +K E
Sbjct: 225 KGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVR 284
Query: 133 EYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKS 182
+ R +G+ FQ+VDD+LD SS+ +GK D G T P + EKS
Sbjct: 285 NFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKS 334
Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 183 AMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLF 242
A++GG +K E + R +G+ FQ+VDD+LD SS+ +GK D G T P +
Sbjct: 270 AVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVI 329
Query: 243 ACEKFPELNPMIMRRFQE 260
EK E + R +E
Sbjct: 330 GVEKSKEFVEKLKRDARE 347
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 139 (54.0 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 34/84 (40%), Positives = 50/84 (59%)
Query: 71 KAIMTDLVQGEFMQLGSKETENERFAH--YLTKTYRKTASLIANCVKASAMLGGADDKLS 128
KA M D+ +GE + L + E+E F Y Y+KTASL A A GGA+++L+
Sbjct: 142 KAGM-DMAEGEVLDL---KLEDESFGENDYFKCIYKKTASLFAISASIGAYTGGAEEELA 197
Query: 129 EVAFEYGRNLGIAFQLVDDLLDFI 152
E +G LG A+Q+VDD+L+F+
Sbjct: 198 ERFSHFGNALGTAYQIVDDILEFL 221
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 32/114 (28%), Positives = 61/114 (53%)
Query: 70 VKAIMTDLV-QGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLS 128
+ A T+ + +GE QL ++ + Y RKTA L + + A++ ++
Sbjct: 144 ILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLFSAAAEIGAIVATKNETWQ 203
Query: 129 EVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKS 182
+ +G +LG+A+Q++DDLLD+ + A+ K DL G AT P+++A +++
Sbjct: 204 KSMAAFGFHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLIYAKQQA 257
Score = 113 (44.8 bits), Expect = 0.00056, P = 0.00056
Identities = 29/112 (25%), Positives = 58/112 (51%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 237
A E A++ ++ + +G +LG+A+Q++DDLLD+ + A+ K DL G AT
Sbjct: 188 AAEIGAIVATKNETWQKSMAAFGFHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKAT 247
Query: 238 APVLFACEKFPELNPMIMRRFQEPGDVE---KAFEFVHKSQGLEQTKFLARK 286
P+++A ++ +R + GD++ + + +++ E T+ A K
Sbjct: 248 LPLIYAKQQAQPAQAEHIREAIKNGDLDDLQSIMKLMDETRAREYTQQCALK 299
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 132 (51.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 35/130 (26%), Positives = 60/130 (46%)
Query: 58 TYRKTASLIANCVKAIMTD-LVQGEFMQLGSK----ETENERFAHYLTKTYRKTASLIAN 112
T + + +A+ T+ LV G+ L + + E++ + KTA L+
Sbjct: 169 TSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEA 228
Query: 113 CVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 172
A++GG D+ E Y R +G+ FQ++DD+LD SS+ +GK DL G T
Sbjct: 229 AAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLT 288
Query: 173 APVLFACEKS 182
P + + +
Sbjct: 289 YPKVMGVDNA 298
Score = 121 (47.7 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 44/158 (27%), Positives = 69/158 (43%)
Query: 108 SLIANCVKASAMLGGADDKLSEVAFEYGRNLG----IAFQLVDDLLDFISSSDAMGKPTA 163
SL AS LG +++ E R +G +A Q D + +S + +
Sbjct: 154 SLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRY 213
Query: 164 ADLKLGLATAPVLFACEK-SAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDA 222
+L TA ++ A A++GG D+ E Y R +G+ FQ++DD+LD SS+
Sbjct: 214 LELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEE 273
Query: 223 MGKPTAADLKLGLATAPVLFACEKFPELNPMIMRRFQE 260
+GK DL G T P + + E + R QE
Sbjct: 274 LGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQE 311
>UNIPROTKB|A6QR05 [details] [associations]
symbol:PDSS2 "PDSS2 protein" species:9913 "Bos taurus"
[GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290 GO:GO:0050878
eggNOG:COG0142 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
HOGENOM:HOG000294216 HOVERGEN:HBG058860 KO:K12505 OMA:QIGEAQE
OrthoDB:EOG44QT18 GO:GO:0050347 EMBL:DAAA02025951 EMBL:DAAA02025952
EMBL:DAAA02025953 EMBL:DAAA02025954 EMBL:BC150063 IPI:IPI00704753
RefSeq:NP_001093855.1 UniGene:Bt.18477 STRING:A6QR05
Ensembl:ENSBTAT00000029142 GeneID:521115 KEGG:bta:521115
InParanoid:A6QR05 NextBio:20873244 Uniprot:A6QR05
Length = 395
Score = 92 (37.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/113 (27%), Positives = 53/113 (46%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 237
+C+ + L D ++ ++AF+YG+++ ++ ++ DLL FI T L L +
Sbjct: 258 SCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDLLPFIKEK------TGDSLTFNLNS 311
Query: 238 APVLFACEKFP-ELNPMIMRRFQEPG--DVEKAFEFVHKSQGLEQTKFLARKH 287
APV+ E +L +R QE G D K E + +G+ L R H
Sbjct: 312 APVVLHQEFLGRDLWIKQIREAQEKGRLDYAKLRETIKAGKGVTSAIDLCRYH 364
Score = 84 (34.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGS--KE---TENERFAHYL 55
++GDF+LA AC ++ L++ V L+ + DLVQG + + + KE T++ + +
Sbjct: 185 LSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYYENSTLAKENRITDDIGISTWK 244
Query: 56 TKTYRKTASLIANCVKAIM 74
+T+ +L+A +A M
Sbjct: 245 EQTFLSHGALLAKSCQAAM 263
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 132 (51.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/103 (33%), Positives = 44/103 (42%)
Query: 76 DLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAFEYG 135
DL G+F + YL KTA+L C A++ ADD +G
Sbjct: 170 DLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFG 229
Query: 136 RNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 178
LG+AFQ VDDL+ GKP DL AT PV+ A
Sbjct: 230 HELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAA 272
Score = 124 (48.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 34/103 (33%), Positives = 44/103 (42%)
Query: 179 CEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATA 238
C A++ ADD +G LG+AFQ VDDL+ GKP DL AT
Sbjct: 208 CALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATL 267
Query: 239 PVLFACEKFPELNPMIMRRFQEPG-----DVEKAFEFVHKSQG 276
PV+ A E + +Q P DVE+A V + G
Sbjct: 268 PVVAALNSRSEAATELAALYQAPAAMTASDVERATALVKVAGG 310
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 130 (50.8 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 61 KTASLIANCVKAIMTDLVQGEFMQLGSKETENERFA----HYLTKTYRKTASLIANCVKA 116
K L+ KA + + G Q+ E E ++ Y+ K KT L+ V A
Sbjct: 138 KKVRLVLELAKAAGPEGMVGG--QVADMEAEGKQLTIDELEYIHK--HKTGKLLEFAVLA 193
Query: 117 SAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVL 176
++L A ++ E E+ + +G+AFQ+ DD+LD + + +GKP +D+ +T L
Sbjct: 194 GSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTL 253
Query: 177 FACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGK 225
F ++ A D L E + +G + QL D+ L +S D + K
Sbjct: 254 FTVDR------AKDILDETIAKAKDAIG-SLQLQDEYL--LSICDLIAK 293
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 130 (50.8 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 61 KTASLIANCVKAIMTDLVQGEFMQLGSKETENERFA----HYLTKTYRKTASLIANCVKA 116
K L+ KA + + G Q+ E E ++ Y+ K KT L+ V A
Sbjct: 138 KKVRLVLELAKAAGPEGMVGG--QVADMEAEGKQLTIDELEYIHK--HKTGKLLEFAVLA 193
Query: 117 SAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVL 176
++L A ++ E E+ + +G+AFQ+ DD+LD + + +GKP +D+ +T L
Sbjct: 194 GSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTL 253
Query: 177 FACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGK 225
F ++ A D L E + +G + QL D+ L +S D + K
Sbjct: 254 FTVDR------AKDILDETIAKAKDAIG-SLQLQDEYL--LSICDLIAK 293
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 130 (50.8 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 105 KTASLIANCVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAA 164
KTA+L+ A++GG ++ E +Y R +G+ FQ+VDD+LD S+ +GK
Sbjct: 242 KTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGK 301
Query: 165 DLKLGLATAPVLFACEKS 182
D+ G T P L E+S
Sbjct: 302 DVMAGKLTYPRLIGLERS 319
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 41/155 (26%), Positives = 67/155 (43%)
Query: 123 ADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSS---DAMGKPTAADLKLGLATAPVLFAC 179
A +++ E + +G + + D S D +G + L A + A
Sbjct: 192 APERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAAA 251
Query: 180 EKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAP 239
A++GG ++ E +Y R +G+ FQ+VDD+LD S+ +GK D+ G T P
Sbjct: 252 VLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYP 311
Query: 240 VLFACEKFPELNPMIMRRFQEP--G-DVEKAFEFV 271
L E+ E+ + R E G D +KA V
Sbjct: 312 RLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLV 346
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 99 LTKTYR-KTASLIANCVKASAMLGGADDKLS-EVAFEYGRNLGIAFQLVDDLLDFISSSD 156
L + +R KT +LI V+ A+ G + + V +Y ++G+AFQ+ DD+LD + +
Sbjct: 174 LERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTA 233
Query: 157 AMGKPTAADLKLGLATAPVLFACEKS 182
+GK AD +LG +T P L E++
Sbjct: 234 TLGKRQGADQQLGKSTYPALLGLEQA 259
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 37/127 (29%), Positives = 58/127 (45%)
Query: 125 DKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGL---ATAPVLFACEK 181
D++S ++ E GIA LD DA GK D + T ++ A +
Sbjct: 137 DRISMIS-ELASASGIAGMCGGQALDL----DAEGKHVPLDALERIHRHKTGALIRAAVR 191
Query: 182 SAMLGGADD--KLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAP 239
L D + V +Y ++G+AFQ+ DD+LD + + +GK AD +LG +T P
Sbjct: 192 LGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYP 251
Query: 240 VLFACEK 246
L E+
Sbjct: 252 ALLGLEQ 258
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 105 KTASLIANCVKASAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAA 164
KTA+L+ A++GG ++ + +YGR +G+ FQ+VDD++D S++ +GK
Sbjct: 245 KTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGK 304
Query: 165 DLKLGLATAPVLFACEKS 182
D+ T P L E+S
Sbjct: 305 DVMARKLTYPRLIGLERS 322
Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00038
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 172 TAPVLFACEK-SAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAAD 230
TA +L A A++GG ++ + +YGR +G+ FQ+VDD++D S++ +GK D
Sbjct: 246 TAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKD 305
Query: 231 LKLGLATAPVLFACEKFPELNPMIMRRFQE 260
+ T P L E+ E+ + R E
Sbjct: 306 VMARKLTYPRLIGLERSREVAEKLRREAAE 335
>TIGR_CMR|SO_1526 [details] [associations]
symbol:SO_1526 "geranyltranstransferase" species:211586
"Shewanella oneidensis MR-1" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
OMA:MEFAHAV KO:K00795 RefSeq:NP_717143.1 ProteinModelPortal:Q8EGR8
GeneID:1169335 KEGG:son:SO_1526 PATRIC:23522694
ProtClustDB:CLSK906310 Uniprot:Q8EGR8
Length = 293
Score = 121 (47.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 40/142 (28%), Positives = 69/142 (48%)
Query: 80 GEFMQLGSKETENERFAHYLTKTYR-KTASLIANCVKASAMLGGADDKLSEVAFEYGRNL 138
G+ + L S + + A LT+ + KT +LI+ V+ + + A + E+ +
Sbjct: 155 GQAIDLASTDKHIDLKA--LTQLHNMKTGALISCAVELALIAANAPKDQYQTMMEFAHAV 212
Query: 139 GIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKSAMLGGADD---KLSEV 195
G+AFQ+ DD+LD I++++ +GKP +D + +T P L L GA D +L +
Sbjct: 213 GLAFQVQDDILDIIATTEELGKPQGSDAESNKSTFPQLLG------LQGAKDTATQLIQE 266
Query: 196 AFEYGRNLGIAFQLVDDLLDFI 217
A L QL+ D +I
Sbjct: 267 ALSALAKLPYNSQLIADFARYI 288
>UNIPROTKB|I3LGK0 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290 GO:GO:0050878
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
Ensembl:ENSSSCT00000024393 OMA:DIVELMS Uniprot:I3LGK0
Length = 241
Score = 85 (35.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQ--LGSKE---TENERFAHYL 55
++GDF+LA AC ++ L++ V L+ + DLVQG + + +KE T++ + +
Sbjct: 92 LSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSAKENRITDDIGISTWK 151
Query: 56 TKTYRKTASLIANCVKAIM 74
+T+ +L+A +A M
Sbjct: 152 EQTFLSHGALLAKSCQAAM 170
Score = 73 (30.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 17/64 (26%), Positives = 35/64 (54%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 237
+C+ + L D ++ ++AF+YG+++ ++ ++ DL FI T+ L L +
Sbjct: 165 SCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDLQPFIKEK------TSDSLTFNLNS 218
Query: 238 APVL 241
APV+
Sbjct: 219 APVV 222
>UNIPROTKB|F1NMS4 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 OMA:QIGEAQE GO:GO:0050347
EMBL:AADN02002114 EMBL:AADN02002115 EMBL:AADN02002116
EMBL:AADN02002117 EMBL:AADN02002118 IPI:IPI00590994
Ensembl:ENSGALT00000024716 Uniprot:F1NMS4
Length = 359
Score = 87 (35.7 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETEN 48
++GDF+LA AC +++L++ V +S + DLVQG + + S+ +EN
Sbjct: 150 LSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYE-NSRSSEN 196
Score = 76 (31.8 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFI--SSSDAM 223
+C+ + L ++ ++AF YG+++ ++ +L DL F+ SSSDAM
Sbjct: 222 SCQAAMELAKHSAEMQDMAFRYGKHMSMSHKLHSDLQPFVKESSSDAM 269
>UNIPROTKB|J9NVK1 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GeneTree:ENSGT00530000063378
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
KO:K12505 OMA:QIGEAQE EMBL:AAEX03008588 EMBL:AAEX03008589
EMBL:AAEX03008590 RefSeq:XP_539071.2 Ensembl:ENSCAFT00000043165
GeneID:481950 KEGG:cfa:481950 Uniprot:J9NVK1
Length = 400
Score = 88 (36.0 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQ--LGSKE---TENERFAHYL 55
++GDF+LA AC ++ L++ V L+ + DLVQG + + +KE TE+ + +
Sbjct: 190 LSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSAKENHITEDIGISTWK 249
Query: 56 TKTYRKTASLIANCVKAIM 74
+T+ +L+A +A M
Sbjct: 250 EQTFLSHGALLAKSCQAAM 268
Score = 76 (31.8 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 28/113 (24%), Positives = 51/113 (45%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 237
+C+ + L D + ++AF+YG+++ ++ ++ DL FI T+ + L +
Sbjct: 263 SCQAAMELAKHDADVQDMAFQYGKHMAMSHKINSDLQPFIKEK------TSDSVTFNLNS 316
Query: 238 APVLFACEKFP-ELNPMIMRRFQEPG--DVEKAFEFVHKSQGLEQTKFLARKH 287
APV+ E +L + QE G D K E + +G+ L R H
Sbjct: 317 APVVLHQEFLGRDLWMKQIGEAQEKGRLDYAKLRETIKAGKGVTSAIDLCRYH 369
>UNIPROTKB|Q86YH6 [details] [associations]
symbol:PDSS2 "Decaprenyl-diphosphate synthase subunit 2"
species:9606 "Homo sapiens" [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
GO:GO:0005739 GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0006744 GO:GO:0046982 Orphanet:139485
GO:GO:0051290 GO:GO:0050878 Orphanet:255249 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AB210839 EMBL:AF254956 EMBL:AL121957 EMBL:AL590489
EMBL:AL355586 EMBL:AL591516 EMBL:BC029491 EMBL:BC039906
IPI:IPI00384708 IPI:IPI00643460 RefSeq:NP_065114.3
UniGene:Hs.486095 ProteinModelPortal:Q86YH6 SMR:Q86YH6
STRING:Q86YH6 PhosphoSite:Q86YH6 DMDM:73620006 PaxDb:Q86YH6
PRIDE:Q86YH6 Ensembl:ENST00000369031 Ensembl:ENST00000369037
GeneID:57107 KEGG:hsa:57107 UCSC:uc003prt.2 UCSC:uc003prv.3
CTD:57107 GeneCards:GC06M107473 HGNC:HGNC:23041 HPA:HPA029685
HPA:HPA029686 MIM:610564 MIM:614652 neXtProt:NX_Q86YH6
PharmGKB:PA134957167 HOGENOM:HOG000294216 HOVERGEN:HBG058860
InParanoid:Q86YH6 KO:K12505 OMA:QIGEAQE OrthoDB:EOG44QT18
PhylomeDB:Q86YH6 BioCyc:MetaCyc:HS15203-MONOMER GenomeRNAi:57107
NextBio:62953 ArrayExpress:Q86YH6 Bgee:Q86YH6 CleanEx:HS_PDSS2
Genevestigator:Q86YH6 GermOnline:ENSG00000164494 GO:GO:0050347
Uniprot:Q86YH6
Length = 399
Score = 88 (36.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLG-SKE---TENERFAHYLT 56
++GDF+LA AC ++ L++ V L+ + DLVQG + + SKE T++ + +
Sbjct: 190 LSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDIGISTWKE 249
Query: 57 KTYRKTASLIANCVKAIM 74
+T+ +L+A +A M
Sbjct: 250 QTFLSHGALLAKSCQAAM 267
Score = 73 (30.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 27/114 (23%), Positives = 53/114 (46%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 237
+C+ + L D ++ +AF+YG+++ ++ ++ D+ FI T+ + L +
Sbjct: 262 SCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIKEK------TSDSMTFNLNS 315
Query: 238 APVLFACEKFPELNPMIMR--RFQEPG--DVEKAFEFVHKSQGLEQTKFLARKH 287
APV+ ++F + I + QE G D K E + +G+ L R H
Sbjct: 316 APVVLH-QEFLGRDLWIKQIGEAQEKGRLDYAKLRERIKAGKGVTSAIDLCRYH 368
>ZFIN|ZDB-GENE-040718-43 [details] [associations]
symbol:pdss2 "prenyl (decaprenyl) diphosphate
synthase, subunit 2" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000092 Pfam:PF00348
ZFIN:ZDB-GENE-040718-43 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:57107 HOVERGEN:HBG058860 KO:K12505 EMBL:BC075908
IPI:IPI00489656 RefSeq:NP_001002351.1 UniGene:Dr.88524
ProteinModelPortal:Q6DHQ9 STRING:Q6DHQ9 PRIDE:Q6DHQ9 GeneID:436624
KEGG:dre:436624 InParanoid:Q6DHQ9 NextBio:20831069 Bgee:Q6DHQ9
Uniprot:Q6DHQ9
Length = 370
Score = 95 (38.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQL-GSKETENERFAHYLTKTY 59
++GDF+LA AC +++L D V +S + D+VQG + + GS E ++ A + + +
Sbjct: 165 LSGDFLLANACTGLAQLNDTKVVELISSAIGDVVQGIYHESSGSAEEDSLTVASWEDQAF 224
Query: 60 RKTASLIANCVKAIM 74
+L+A +A M
Sbjct: 225 LSHGALLAKSCQAAM 239
Score = 64 (27.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 237
+C+ + L + + +AF+YG++L + +L +L F+ S G A L +
Sbjct: 234 SCQAAMKLARHNTEAQNLAFQYGKHLALGHKLNSELQPFVKS----GSEGAV---FHLDS 286
Query: 238 APVLF 242
APV+F
Sbjct: 287 APVVF 291
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 35/117 (29%), Positives = 56/117 (47%)
Query: 105 KTASLIANCVKASAMLGGADDKLSEVAF-EYGRNLGIAFQLVDDLLDFISSSDAMGKPTA 163
KT +L+ V AM G + ++ EY + +G+A+Q+ DD++D S+ + +GKP
Sbjct: 185 KTGALLEASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGKPVG 244
Query: 164 ADLKLGLATAPVLFACEKSAMLGGADDK---LSEVAFEYGRNLGIAFQLVDDLLDFI 217
+D+ +T P L L GA DK L + A + L Q + D FI
Sbjct: 245 SDIAANKSTYPALLG------LQGAQDKAENLLQQALQALSRLPYNTQSLADFATFI 295
>FB|FBgn0037044 [details] [associations]
symbol:CG10585 species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] EMBL:AE014296 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 eggNOG:COG0142 GeneTree:ENSGT00530000063378
GO:GO:0000010 InterPro:IPR017446 PANTHER:PTHR12001 KO:K12505
EMBL:AY051597 RefSeq:NP_649277.1 UniGene:Dm.1022 SMR:Q9VP87
MINT:MINT-762100 EnsemblMetazoa:FBtr0078287 GeneID:40323
KEGG:dme:Dmel_CG10585 UCSC:CG10585-RA FlyBase:FBgn0037044
InParanoid:Q9VP87 OMA:IILAMQD OrthoDB:EOG4CFXQJ GenomeRNAi:40323
NextBio:818180 Uniprot:Q9VP87
Length = 448
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 44/182 (24%), Positives = 81/182 (44%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENERFAHYLTKTYR 60
+ GD++L + ++ LR+ +V +S + D + EF +G ++ +N Y T++
Sbjct: 210 LTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEF--IGERDEQNNPLP-YKPGTFQ 266
Query: 61 KTASLIANCVKA--IMTDLVQGEFMQLGSKETENERFAHYLTKTYRKTASLIANCVKASA 118
+ + + +MT + + LG+ E E E + SL+ +AS
Sbjct: 267 RPSLSVGVDFNEHDVMTPMPIAQV--LGNPEEEWE------CRNILNAGSLLGKSCQASL 318
Query: 119 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 178
L G ++L A+ +G++L +A+Q D F P D+ L +APVLF
Sbjct: 319 KLAGQSEELQRHAYRFGKHLALAWQACLDAEPF----QCPQLPL--DVTFSLVSAPVLFH 372
Query: 179 CE 180
E
Sbjct: 373 LE 374
>MGI|MGI:1918615 [details] [associations]
symbol:Pdss2 "prenyl (solanesyl) diphosphate synthase,
subunit 2" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;IDA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IDA]
[GO:0050878 "regulation of body fluid levels" evidence=IMP]
[GO:0051290 "protein heterotetramerization" evidence=IPI]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 MGI:MGI:1918615 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0006744
GO:GO:0046982 GO:GO:0051290 GO:GO:0050878 eggNOG:COG0142
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107 HOGENOM:HOG000294216
HOVERGEN:HBG058860 KO:K12505 OMA:QIGEAQE OrthoDB:EOG44QT18
EMBL:AB210840 EMBL:AK017329 EMBL:AK140091 EMBL:BC147693
EMBL:BC147694 EMBL:BC147752 EMBL:BC147753 IPI:IPI00316693
IPI:IPI00659599 IPI:IPI00672429 RefSeq:NP_001161761.1
RefSeq:NP_082048.2 UniGene:Mm.490430 ProteinModelPortal:Q33DR3
SMR:Q33DR3 STRING:Q33DR3 PhosphoSite:Q33DR3 PRIDE:Q33DR3
Ensembl:ENSMUST00000095725 Ensembl:ENSMUST00000159139 GeneID:71365
KEGG:mmu:71365 UCSC:uc007ezh.2 UCSC:uc007ezi.2 UCSC:uc011xdk.1
InParanoid:B2RWA7 ChiTaRS:PDSS2 NextBio:333637 Bgee:Q33DR3
Genevestigator:Q33DR3 GermOnline:ENSMUSG00000038240 Uniprot:Q33DR3
Length = 401
Score = 84 (34.6 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 1 MAGDFILAVACQMISRLRDNDVTLTLSQIMTDLVQGEFMQLGSKETENE-----RFAHYL 55
++GDF+LA AC ++ L++ V LS + DLV G + + + EN + +
Sbjct: 191 LSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGISTWK 250
Query: 56 TKTYRKTASLIANCVKAIM 74
+T+ +L+A +A M
Sbjct: 251 EQTFLSHCALLAKSCQAAM 269
Score = 73 (30.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 30/115 (26%), Positives = 55/115 (47%)
Query: 178 ACEKSAMLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLK-LGLA 236
+C+ + L D + ++AF+YG+++ ++ ++ DL FI K A+D K L
Sbjct: 264 SCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFI-------KDKASDSKTFNLN 316
Query: 237 TAPVLFACEKFPELNPMIMR--RFQEPGDVE--KAFEFVHKSQGLEQTKFLARKH 287
+APV+ ++F + I + QE G + K E + +G+ L R H
Sbjct: 317 SAPVVLH-QEFLGRDLWIKQIGEAQEKGSLNYSKLRETIKAGKGVTSAIDLCRYH 370
>UNIPROTKB|Q5LX41 [details] [associations]
symbol:ispA "Farnesyl diphosphate synthase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 112 (44.5 bits), Expect = 0.00055, P = 0.00055
Identities = 32/98 (32%), Positives = 48/98 (48%)
Query: 77 LVQGEFMQLGSKETENERFAHYLTKTYR-KTASLIANCVKASAMLGGAD-DKLSEVAFEY 134
+V G+ + + ++ +T+ KT +LI A A+L GAD D L + Y
Sbjct: 148 MVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIEWAAAAGAVLAGADPDPLRQ----Y 203
Query: 135 GRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 172
R LG+AFQ+ DD+LD ++ GK D G AT
Sbjct: 204 ARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGKAT 241
>TIGR_CMR|SPO_0248 [details] [associations]
symbol:SPO_0248 "farnesyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 112 (44.5 bits), Expect = 0.00055, P = 0.00055
Identities = 32/98 (32%), Positives = 48/98 (48%)
Query: 77 LVQGEFMQLGSKETENERFAHYLTKTYR-KTASLIANCVKASAMLGGAD-DKLSEVAFEY 134
+V G+ + + ++ +T+ KT +LI A A+L GAD D L + Y
Sbjct: 148 MVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIEWAAAAGAVLAGADPDPLRQ----Y 203
Query: 135 GRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLAT 172
R LG+AFQ+ DD+LD ++ GK D G AT
Sbjct: 204 ARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGKAT 241
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 111 (44.1 bits), Expect = 0.00075, P = 0.00075
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 77 LVQGEFMQLGSKETENERFA-HYLTKTYRKTASLIANCVKASAMLGGADDKLSEVAFE-Y 134
+V G+ + LGS + ++ A Y+ + KT +LI V A+ G +K A + Y
Sbjct: 153 MVGGQAIDLGSVGLKLDQQALEYMHR--HKTGALIEASVILGALASGRAEKGELKALQTY 210
Query: 135 GRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVL 176
+ +G+AFQ+ DD+LD S + +GK AD+ T P L
Sbjct: 211 AQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPAL 252
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 110 (43.8 bits), Expect = 0.00096, P = 0.00096
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 127 LSEVAFEYGRNLGIAFQLV-DDLLDFISSSDAMGK-PTAADLKLGLATAPVLFACEKS-A 183
L+E + G LG A L ++ L + + + + T A ++ + L A EK A
Sbjct: 143 LAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLG-ALAAGEKGRA 201
Query: 184 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 243
ML D Y +G+AFQ+ DD+LD IS ++ +GKP +D +L +T P L
Sbjct: 202 MLPHLD--------RYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLG 253
Query: 244 CE 245
E
Sbjct: 254 LE 255
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 110 (43.8 bits), Expect = 0.00096, P = 0.00096
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 127 LSEVAFEYGRNLGIAFQLV-DDLLDFISSSDAMGK-PTAADLKLGLATAPVLFACEKS-A 183
L+E + G LG A L ++ L + + + + T A ++ + L A EK A
Sbjct: 143 LAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLG-ALAAGEKGRA 201
Query: 184 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 243
ML D Y +G+AFQ+ DD+LD IS ++ +GKP +D +L +T P L
Sbjct: 202 MLPHLD--------RYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLG 253
Query: 244 CE 245
E
Sbjct: 254 LE 255
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 287 287 0.00087 115 3 11 22 0.49 33
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 78
No. of states in DFA: 556 (59 KB)
Total size of DFA: 152 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.77u 0.08s 23.85t Elapsed: 00:00:04
Total cpu time: 23.78u 0.08s 23.86t Elapsed: 00:00:04
Start: Thu Aug 15 15:42:43 2013 End: Thu Aug 15 15:42:47 2013