Query psy17026
Match_columns 435
No_of_seqs 327 out of 2902
Neff 9.4
Searched_HMMs 46136
Date Fri Aug 16 19:56:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17026.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17026hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03448 mycothiol_MshD mycot 100.0 3.1E-29 6.7E-34 238.2 33.0 269 107-404 4-291 (292)
2 TIGR03827 GNAT_ablB putative b 99.9 5.2E-23 1.1E-27 192.0 25.9 231 182-421 19-266 (266)
3 PRK09491 rimI ribosomal-protei 99.8 1.4E-17 3.1E-22 141.2 17.8 144 103-251 1-146 (146)
4 PRK09491 rimI ribosomal-protei 99.8 5.4E-17 1.2E-21 137.7 17.7 144 274-421 2-146 (146)
5 KOG3138|consensus 99.8 1.8E-18 3.9E-23 147.7 8.0 161 3-253 13-174 (187)
6 TIGR03827 GNAT_ablB putative b 99.7 6.6E-17 1.4E-21 150.9 17.1 150 100-251 112-266 (266)
7 KOG3139|consensus 99.7 1E-16 2.2E-21 130.8 15.2 136 283-421 26-164 (165)
8 KOG3139|consensus 99.7 1.6E-16 3.5E-21 129.7 15.9 139 110-251 23-164 (165)
9 PRK10146 aminoalkylphosphonic 99.7 7.8E-17 1.7E-21 136.2 14.0 128 102-230 2-137 (144)
10 PRK10975 TDP-fucosamine acetyl 99.7 1.8E-15 3.9E-20 134.7 20.9 170 203-403 4-190 (194)
11 TIGR01575 rimI ribosomal-prote 99.7 3.7E-16 7.9E-21 129.5 15.3 130 283-417 1-131 (131)
12 PRK10140 putative acetyltransf 99.7 1E-15 2.2E-20 132.0 18.4 146 103-249 3-160 (162)
13 TIGR01575 rimI ribosomal-prote 99.7 3.6E-16 7.7E-21 129.6 14.9 130 113-247 1-131 (131)
14 PRK10146 aminoalkylphosphonic 99.7 5.2E-16 1.1E-20 131.2 14.3 129 272-401 2-138 (144)
15 PRK10140 putative acetyltransf 99.7 2.3E-15 5E-20 129.8 18.6 145 273-419 3-160 (162)
16 KOG3235|consensus 99.7 6.1E-17 1.3E-21 130.6 6.9 148 104-253 2-155 (193)
17 KOG3216|consensus 99.7 1.8E-15 4E-20 121.9 15.2 129 102-231 2-146 (163)
18 COG1247 Sortase and related ac 99.7 2.8E-15 6E-20 126.7 16.1 149 104-253 2-166 (169)
19 PRK10151 ribosomal-protein-L7/ 99.7 8.8E-15 1.9E-19 128.5 18.7 153 270-423 7-178 (179)
20 COG0456 RimI Acetyltransferase 99.7 1.5E-15 3.2E-20 133.1 13.3 148 270-419 8-171 (177)
21 COG0456 RimI Acetyltransferase 99.7 3.3E-15 7.1E-20 130.9 15.1 138 101-239 9-162 (177)
22 PRK03624 putative acetyltransf 99.7 3.9E-15 8.5E-20 124.8 14.9 125 103-231 2-130 (140)
23 COG1247 Sortase and related ac 99.6 7.3E-15 1.6E-19 124.2 16.1 150 274-424 2-167 (169)
24 PRK10151 ribosomal-protein-L7/ 99.6 1.6E-14 3.4E-19 127.0 18.7 151 101-252 8-177 (179)
25 PTZ00330 acetyltransferase; Pr 99.6 9.3E-15 2E-19 123.9 15.7 125 103-231 6-141 (147)
26 TIGR02382 wecD_rffC TDP-D-fuco 99.6 1.1E-14 2.4E-19 129.2 16.5 166 210-403 5-187 (191)
27 TIGR02406 ectoine_EctA L-2,4-d 99.6 4.3E-15 9.4E-20 127.4 13.4 124 106-230 1-127 (157)
28 TIGR02382 wecD_rffC TDP-D-fuco 99.6 6.5E-15 1.4E-19 130.7 14.5 128 103-233 43-187 (191)
29 KOG3235|consensus 99.6 1.3E-15 2.8E-20 123.0 8.2 148 274-423 2-155 (193)
30 PRK03624 putative acetyltransf 99.6 1.9E-14 4.2E-19 120.5 15.5 125 273-401 2-130 (140)
31 PF13420 Acetyltransf_4: Acety 99.6 3.1E-14 6.7E-19 121.9 17.0 130 106-237 1-145 (155)
32 KOG3234|consensus 99.6 4.2E-15 9.1E-20 120.2 9.9 159 275-434 3-164 (173)
33 PRK10809 ribosomal-protein-S5- 99.6 6.1E-14 1.3E-18 124.8 18.7 153 269-421 13-187 (194)
34 KOG3138|consensus 99.6 5E-15 1.1E-19 126.7 10.3 157 273-429 16-180 (187)
35 TIGR02406 ectoine_EctA L-2,4-d 99.6 1.7E-14 3.8E-19 123.6 13.6 125 276-401 1-128 (157)
36 PF13420 Acetyltransf_4: Acety 99.6 5.7E-14 1.2E-18 120.2 16.8 137 276-414 1-153 (155)
37 PRK10809 ribosomal-protein-S5- 99.6 9.4E-14 2E-18 123.7 18.7 153 99-251 13-187 (194)
38 PRK10975 TDP-fucosamine acetyl 99.6 3.2E-14 6.9E-19 126.6 15.6 128 103-233 46-190 (194)
39 PF00583 Acetyltransf_1: Acety 99.6 1.9E-14 4.1E-19 109.3 12.1 80 147-227 1-83 (83)
40 PRK01346 hypothetical protein; 99.6 6.5E-13 1.4E-17 132.3 25.5 205 102-334 5-232 (411)
41 PTZ00330 acetyltransferase; Pr 99.6 8.6E-14 1.9E-18 118.0 16.2 125 273-401 6-141 (147)
42 PLN02706 glucosamine 6-phospha 99.6 8.5E-14 1.8E-18 118.5 15.9 127 101-231 4-144 (150)
43 PF13527 Acetyltransf_9: Acety 99.6 5.5E-14 1.2E-18 116.1 13.9 118 105-228 1-126 (127)
44 PHA00673 acetyltransferase dom 99.6 6.5E-14 1.4E-18 116.7 14.3 122 107-231 10-146 (154)
45 PRK15130 spermidine N1-acetylt 99.6 2.3E-13 4.9E-18 120.3 18.1 151 271-422 4-167 (186)
46 PF00583 Acetyltransf_1: Acety 99.6 6E-14 1.3E-18 106.5 12.3 80 317-397 1-83 (83)
47 PRK15130 spermidine N1-acetylt 99.6 2.5E-13 5.4E-18 120.0 17.8 150 102-252 5-167 (186)
48 PRK07922 N-acetylglutamate syn 99.5 1.3E-13 2.8E-18 119.6 14.7 122 102-231 4-127 (169)
49 PRK10514 putative acetyltransf 99.5 2.1E-13 4.5E-18 115.4 14.8 132 103-248 1-142 (145)
50 PF13523 Acetyltransf_8: Acety 99.5 3.6E-13 7.9E-18 114.9 16.3 128 106-233 1-143 (152)
51 TIGR03103 trio_acet_GNAT GNAT- 99.5 2.9E-13 6.3E-18 138.0 18.1 133 101-234 80-220 (547)
52 TIGR03585 PseH pseudaminic aci 99.5 4.2E-13 9.1E-18 114.9 16.1 139 106-247 3-155 (156)
53 PF13527 Acetyltransf_9: Acety 99.5 2.4E-13 5.2E-18 112.2 14.0 119 275-399 1-127 (127)
54 PF13673 Acetyltransf_10: Acet 99.5 3.7E-13 8.1E-18 109.2 14.6 103 113-226 1-117 (117)
55 PF13523 Acetyltransf_8: Acety 99.5 9.8E-13 2.1E-17 112.2 17.3 128 276-403 1-143 (152)
56 TIGR03585 PseH pseudaminic aci 99.5 6.9E-13 1.5E-17 113.6 16.1 139 276-417 3-155 (156)
57 TIGR03103 trio_acet_GNAT GNAT- 99.5 1.1E-12 2.5E-17 133.7 18.9 135 270-405 79-221 (547)
58 TIGR03448 mycothiol_MshD mycot 99.5 8.7E-13 1.9E-17 125.3 16.8 131 101-232 147-289 (292)
59 PLN02706 glucosamine 6-phospha 99.5 1.1E-12 2.3E-17 111.7 15.5 126 272-401 5-144 (150)
60 PRK07757 acetyltransferase; Pr 99.5 6E-13 1.3E-17 113.6 13.9 118 103-231 1-122 (152)
61 KOG3216|consensus 99.5 1.5E-12 3.3E-17 105.2 15.1 129 273-402 3-147 (163)
62 KOG3234|consensus 99.5 1.6E-13 3.6E-18 111.1 9.6 150 104-254 2-154 (173)
63 PRK07922 N-acetylglutamate syn 99.5 9.6E-13 2.1E-17 114.1 15.1 122 272-401 4-127 (169)
64 TIGR01686 FkbH FkbH-like domai 99.5 7.6E-13 1.7E-17 126.8 15.3 125 100-229 183-319 (320)
65 PRK10562 putative acetyltransf 99.5 1.8E-12 3.8E-17 109.8 15.7 129 106-249 2-140 (145)
66 PRK09831 putative acyltransfer 99.5 6.5E-13 1.4E-17 112.7 12.5 128 105-250 2-144 (147)
67 PHA00673 acetyltransferase dom 99.4 2.6E-12 5.6E-17 107.2 14.0 126 278-407 11-150 (154)
68 PRK10514 putative acetyltransf 99.4 3.6E-12 7.9E-17 107.7 15.1 131 274-418 2-142 (145)
69 PRK07757 acetyltransferase; Pr 99.4 2.9E-12 6.2E-17 109.3 13.9 120 274-401 2-122 (152)
70 PRK10314 putative acyltransfer 99.4 1E-12 2.2E-17 112.0 10.8 122 276-401 9-134 (153)
71 PRK10314 putative acyltransfer 99.4 9.4E-13 2E-17 112.1 10.6 123 106-231 9-134 (153)
72 PHA01807 hypothetical protein 99.4 3.4E-12 7.3E-17 107.8 13.4 115 109-224 9-136 (153)
73 PF13673 Acetyltransf_10: Acet 99.4 6.6E-12 1.4E-16 101.8 14.6 86 300-396 31-117 (117)
74 PRK09831 putative acyltransfer 99.4 1.1E-12 2.5E-17 111.2 10.4 128 275-420 2-144 (147)
75 COG1246 ArgA N-acetylglutamate 99.4 1.9E-12 4.2E-17 106.2 11.1 117 105-230 2-122 (153)
76 PRK10562 putative acetyltransf 99.4 1.2E-11 2.6E-16 104.6 15.5 129 276-419 2-140 (145)
77 TIGR01686 FkbH FkbH-like domai 99.4 6.6E-12 1.4E-16 120.4 15.4 122 273-399 186-319 (320)
78 TIGR01890 N-Ac-Glu-synth amino 99.4 4.2E-12 9.1E-17 126.5 14.3 121 275-401 284-405 (429)
79 PLN02825 amino-acid N-acetyltr 99.4 3.5E-12 7.5E-17 127.3 12.9 118 105-231 369-490 (515)
80 PF13508 Acetyltransf_7: Acety 99.4 5.7E-12 1.2E-16 94.7 11.0 78 311-398 2-79 (79)
81 TIGR01890 N-Ac-Glu-synth amino 99.4 4.9E-12 1.1E-16 126.1 13.8 122 104-231 283-405 (429)
82 PRK05279 N-acetylglutamate syn 99.4 4.3E-12 9.4E-17 127.1 13.1 119 274-401 295-417 (441)
83 PF13508 Acetyltransf_7: Acety 99.4 6.1E-12 1.3E-16 94.6 10.7 77 142-228 3-79 (79)
84 KOG3396|consensus 99.4 1.2E-11 2.6E-16 97.8 12.1 124 103-230 6-143 (150)
85 PRK05279 N-acetylglutamate syn 99.4 6.1E-12 1.3E-16 126.0 13.0 119 104-231 295-417 (441)
86 PLN02825 amino-acid N-acetyltr 99.4 7.4E-12 1.6E-16 125.0 13.4 118 275-401 369-490 (515)
87 COG3153 Predicted acetyltransf 99.4 3.7E-11 8E-16 101.9 15.5 143 102-253 2-152 (171)
88 PF13302 Acetyltransf_3: Acety 99.4 4.5E-11 9.7E-16 100.4 16.0 122 104-227 2-142 (142)
89 COG1246 ArgA N-acetylglutamate 99.3 1E-11 2.2E-16 102.0 11.2 118 275-401 2-123 (153)
90 PRK12308 bifunctional arginino 99.3 1.1E-11 2.4E-16 128.7 13.7 120 101-231 461-584 (614)
91 PHA01807 hypothetical protein 99.3 3.2E-11 7E-16 101.9 13.1 114 279-394 9-136 (153)
92 PF13302 Acetyltransf_3: Acety 99.3 1.2E-10 2.5E-15 97.9 15.7 124 273-397 1-142 (142)
93 PRK12308 bifunctional arginino 99.3 2.4E-11 5.2E-16 126.2 13.6 121 271-402 461-585 (614)
94 PRK01346 hypothetical protein; 99.3 8.5E-11 1.8E-15 117.1 15.7 127 273-405 6-140 (411)
95 KOG2488|consensus 99.3 4.4E-11 9.5E-16 100.5 11.1 119 282-401 54-182 (202)
96 PRK13688 hypothetical protein; 99.3 5.8E-11 1.2E-15 100.9 11.3 107 106-232 20-134 (156)
97 COG3153 Predicted acetyltransf 99.3 3.7E-10 8E-15 95.9 16.0 142 273-423 3-152 (171)
98 PRK13688 hypothetical protein; 99.2 1.1E-10 2.5E-15 99.1 11.7 107 276-402 20-134 (156)
99 PF08445 FR47: FR47-like prote 99.2 3.8E-10 8.2E-15 85.9 13.4 61 169-231 22-82 (86)
100 PF08445 FR47: FR47-like prote 99.2 5E-10 1.1E-14 85.2 12.5 61 339-401 22-82 (86)
101 KOG3396|consensus 99.2 3.4E-10 7.4E-15 89.6 11.8 124 273-400 6-143 (150)
102 KOG2488|consensus 99.1 3.1E-10 6.8E-15 95.4 10.3 118 112-230 54-181 (202)
103 cd02169 Citrate_lyase_ligase C 99.1 3.4E-10 7.4E-15 106.0 10.6 78 143-231 7-84 (297)
104 cd02169 Citrate_lyase_ligase C 99.0 1.5E-09 3.2E-14 101.7 10.6 82 312-404 6-87 (297)
105 COG3393 Predicted acetyltransf 99.0 2.7E-09 5.8E-14 95.2 11.5 87 315-405 180-266 (268)
106 COG3393 Predicted acetyltransf 99.0 3.3E-09 7.1E-14 94.6 11.5 87 143-233 178-264 (268)
107 COG2153 ElaA Predicted acyltra 99.0 2E-09 4.3E-14 86.6 8.5 131 276-411 10-144 (155)
108 COG1670 RimL Acetyltransferase 99.0 5.4E-09 1.2E-13 91.8 11.8 102 321-423 77-181 (187)
109 TIGR00124 cit_ly_ligase [citra 99.0 7.3E-09 1.6E-13 98.7 12.9 81 142-233 31-111 (332)
110 COG1670 RimL Acetyltransferase 98.9 9.9E-09 2.2E-13 90.0 12.2 102 151-252 77-180 (187)
111 COG2153 ElaA Predicted acyltra 98.9 7E-09 1.5E-13 83.5 7.7 122 107-231 11-136 (155)
112 COG3981 Predicted acetyltransf 98.9 3E-08 6.4E-13 82.6 11.4 87 144-232 71-160 (174)
113 TIGR00124 cit_ly_ligase [citra 98.9 1.8E-08 3.9E-13 96.0 11.6 82 312-404 31-112 (332)
114 PF12746 GNAT_acetyltran: GNAT 98.8 5.8E-08 1.3E-12 89.0 12.8 128 271-408 126-254 (265)
115 COG3981 Predicted acetyltransf 98.8 5.3E-08 1.1E-12 81.2 9.5 89 314-404 71-162 (174)
116 KOG3397|consensus 98.7 9E-08 2E-12 79.1 9.6 129 102-235 11-145 (225)
117 KOG3397|consensus 98.7 7E-08 1.5E-12 79.8 8.8 83 318-405 63-145 (225)
118 PF12746 GNAT_acetyltran: GNAT 98.6 1.1E-06 2.4E-11 80.6 14.8 127 101-237 126-253 (265)
119 PF12568 DUF3749: Acetyltransf 98.6 8.6E-07 1.9E-11 70.7 11.4 111 108-229 9-123 (128)
120 PF13718 GNAT_acetyltr_2: GNAT 98.6 2.9E-06 6.4E-11 73.9 15.8 119 130-251 14-195 (196)
121 cd04301 NAT_SF N-Acyltransfera 98.6 3.7E-07 8.1E-12 64.2 8.5 63 315-378 2-64 (65)
122 cd04301 NAT_SF N-Acyltransfera 98.6 4.6E-07 9.9E-12 63.8 8.9 63 145-208 2-64 (65)
123 PF12568 DUF3749: Acetyltransf 98.6 2.2E-06 4.7E-11 68.4 13.2 112 278-400 9-124 (128)
124 TIGR01211 ELP3 histone acetylt 98.5 5.7E-07 1.2E-11 90.6 11.4 85 143-231 412-516 (522)
125 PF13718 GNAT_acetyltr_2: GNAT 98.5 2.9E-06 6.3E-11 73.9 14.0 117 302-421 16-195 (196)
126 TIGR01211 ELP3 histone acetylt 98.5 1E-06 2.2E-11 88.9 11.5 87 311-401 410-516 (522)
127 KOG4144|consensus 98.5 2.1E-07 4.6E-12 75.4 4.9 127 272-401 10-161 (190)
128 KOG4144|consensus 98.4 1.8E-07 3.9E-12 75.9 4.1 129 100-231 8-161 (190)
129 PF08444 Gly_acyl_tr_C: Aralky 98.4 8E-07 1.7E-11 66.4 6.4 74 149-230 6-79 (89)
130 PF14542 Acetyltransf_CG: GCN5 98.4 5.2E-06 1.1E-10 61.6 10.8 71 145-224 2-72 (78)
131 PF08444 Gly_acyl_tr_C: Aralky 98.3 2.2E-06 4.7E-11 64.1 6.3 74 319-400 6-79 (89)
132 COG3818 Predicted acetyltransf 98.3 5.7E-06 1.2E-10 65.3 8.5 126 102-231 6-148 (167)
133 PF14542 Acetyltransf_CG: GCN5 98.3 1.8E-05 4E-10 58.7 10.7 71 315-394 2-72 (78)
134 COG3818 Predicted acetyltransf 98.1 1.5E-05 3.3E-10 62.9 7.9 125 274-402 8-149 (167)
135 KOG2779|consensus 98.1 0.00028 6.1E-09 65.4 16.9 278 104-406 81-402 (421)
136 KOG4135|consensus 98.1 0.00023 4.9E-09 57.8 13.7 131 101-231 11-170 (185)
137 COG1444 Predicted P-loop ATPas 98.0 0.00015 3.4E-09 75.1 15.0 119 301-423 458-612 (758)
138 COG1444 Predicted P-loop ATPas 97.9 0.00026 5.7E-09 73.5 14.0 100 130-232 457-592 (758)
139 COG4552 Eis Predicted acetyltr 97.8 7.8E-05 1.7E-09 69.4 8.2 113 113-231 8-127 (389)
140 COG4552 Eis Predicted acetyltr 97.8 9.7E-05 2.1E-09 68.8 8.1 87 311-403 38-129 (389)
141 KOG4135|consensus 97.8 0.00019 4E-09 58.2 8.6 65 337-401 106-170 (185)
142 COG2388 Predicted acetyltransf 97.7 0.00011 2.3E-09 56.7 6.7 60 140-201 13-72 (99)
143 COG3053 CitC Citrate lyase syn 97.7 0.00052 1.1E-08 62.3 11.8 81 143-234 37-118 (352)
144 COG2388 Predicted acetyltransf 97.6 0.0002 4.4E-09 55.1 6.8 60 310-371 13-72 (99)
145 COG3053 CitC Citrate lyase syn 97.5 0.00063 1.4E-08 61.8 9.4 77 318-405 43-119 (352)
146 COG3375 Uncharacterized conser 97.5 0.0039 8.5E-08 54.4 13.2 134 104-238 3-144 (266)
147 TIGR03019 pepcterm_femAB FemAB 97.4 0.0051 1.1E-07 59.4 14.9 130 272-407 150-287 (330)
148 COG5628 Predicted acetyltransf 97.4 0.0014 3E-08 51.2 8.3 82 141-227 36-119 (143)
149 COG0454 WecD Histone acetyltra 97.3 0.00043 9.3E-09 54.7 4.9 44 174-226 87-130 (156)
150 PF04958 AstA: Arginine N-succ 97.3 0.0084 1.8E-07 56.9 14.0 124 103-227 1-184 (342)
151 PF13480 Acetyltransf_6: Acety 97.2 0.011 2.4E-07 48.9 12.7 97 280-380 27-135 (142)
152 PF00765 Autoind_synth: Autoin 97.2 0.0061 1.3E-07 53.2 11.3 119 109-231 5-155 (182)
153 COG0454 WecD Histone acetyltra 97.1 0.00067 1.5E-08 53.5 4.9 44 344-396 87-130 (156)
154 COG5628 Predicted acetyltransf 97.1 0.0071 1.5E-07 47.4 9.7 83 310-397 35-119 (143)
155 PF13480 Acetyltransf_6: Acety 97.0 0.015 3.2E-07 48.2 12.3 97 110-210 27-135 (142)
156 COG3375 Uncharacterized conser 97.0 0.016 3.5E-07 50.7 12.3 132 275-407 4-143 (266)
157 PF04339 DUF482: Protein of un 97.0 0.021 4.6E-07 55.4 14.1 241 143-405 45-333 (370)
158 PF06852 DUF1248: Protein of u 97.0 0.071 1.5E-06 46.1 15.7 159 109-292 10-179 (181)
159 PRK10456 arginine succinyltran 96.9 0.0092 2E-07 56.5 10.9 126 103-229 1-184 (344)
160 PF00765 Autoind_synth: Autoin 96.8 0.022 4.7E-07 49.7 11.6 118 280-401 6-155 (182)
161 PF06852 DUF1248: Protein of u 96.7 0.076 1.7E-06 45.9 14.1 120 276-401 7-137 (181)
162 PF01233 NMT: Myristoyl-CoA:pr 96.6 0.063 1.4E-06 44.9 12.2 102 103-205 23-146 (162)
163 PF02388 FemAB: FemAB family; 96.6 0.35 7.5E-06 48.1 19.6 244 143-397 36-379 (406)
164 COG5092 NMT1 N-myristoyl trans 96.3 0.39 8.5E-06 44.4 16.3 273 106-406 84-419 (451)
165 TIGR03244 arg_catab_AstA argin 96.2 0.041 8.9E-07 52.1 10.2 122 106-229 2-182 (336)
166 TIGR03245 arg_AOST_alph argini 96.2 0.042 9.1E-07 52.0 10.1 123 106-229 2-183 (336)
167 PRK13834 putative autoinducer 96.2 0.077 1.7E-06 47.4 11.4 120 107-230 11-164 (207)
168 TIGR03243 arg_catab_AOST argin 96.1 0.054 1.2E-06 51.2 10.2 123 106-229 2-182 (335)
169 TIGR03694 exosort_acyl putativ 96.1 0.057 1.2E-06 49.5 10.3 117 110-230 15-197 (241)
170 TIGR03694 exosort_acyl putativ 96.0 0.073 1.6E-06 48.7 10.6 122 275-400 9-197 (241)
171 PF09924 DUF2156: Uncharacteri 96.0 0.15 3.2E-06 48.4 13.0 212 143-381 24-247 (299)
172 PF01233 NMT: Myristoyl-CoA:pr 95.9 0.14 3E-06 43.0 10.5 105 271-376 21-147 (162)
173 PF09390 DUF1999: Protein of u 95.9 0.5 1.1E-05 38.5 13.3 121 104-230 1-140 (161)
174 COG3882 FkbH Predicted enzyme 95.8 0.038 8.3E-07 54.1 8.1 129 99-231 409-550 (574)
175 PRK13834 putative autoinducer 95.5 0.26 5.7E-06 44.0 12.0 119 278-400 12-164 (207)
176 COG3882 FkbH Predicted enzyme 95.5 0.054 1.2E-06 53.1 7.8 125 273-401 413-550 (574)
177 PF13880 Acetyltransf_13: ESCO 95.5 0.018 3.9E-07 41.2 3.5 31 338-368 5-35 (70)
178 PF05301 Mec-17: Touch recepto 95.4 0.093 2E-06 41.6 7.6 69 151-223 18-97 (120)
179 COG3916 LasI N-acyl-L-homoseri 95.3 0.28 6E-06 43.0 10.7 121 107-231 10-163 (209)
180 PF11039 DUF2824: Protein of u 95.2 0.4 8.6E-06 38.4 10.5 101 311-416 37-137 (151)
181 PF05301 Mec-17: Touch recepto 95.2 0.28 6.2E-06 38.9 9.6 79 312-394 4-98 (120)
182 COG3138 AstA Arginine/ornithin 95.2 0.051 1.1E-06 49.4 6.1 89 103-191 1-142 (336)
183 TIGR03019 pepcterm_femAB FemAB 95.2 0.27 5.9E-06 47.4 11.8 124 103-232 151-282 (330)
184 PF04958 AstA: Arginine N-succ 95.1 0.4 8.7E-06 45.8 12.2 125 273-398 1-185 (342)
185 PF13880 Acetyltransf_13: ESCO 95.1 0.032 7E-07 39.9 3.7 29 169-197 6-34 (70)
186 PF11039 DUF2824: Protein of u 95.0 1.1 2.4E-05 35.9 12.5 93 140-237 36-128 (151)
187 cd04264 DUF619-NAGS DUF619 dom 95.0 0.18 3.9E-06 39.1 8.0 66 144-215 10-75 (99)
188 COG1243 ELP3 Histone acetyltra 95.0 0.034 7.4E-07 54.2 4.8 78 320-401 415-509 (515)
189 PRK10456 arginine succinyltran 94.7 0.31 6.7E-06 46.4 10.3 94 274-367 2-148 (344)
190 COG1243 ELP3 Histone acetyltra 94.6 0.048 1E-06 53.2 4.7 50 177-230 459-508 (515)
191 PHA01733 hypothetical protein 94.5 0.088 1.9E-06 43.6 5.5 89 138-231 42-132 (153)
192 PHA00432 internal virion prote 94.4 0.48 1E-05 38.7 9.4 83 141-231 36-121 (137)
193 PF09390 DUF1999: Protein of u 94.2 2.7 5.8E-05 34.4 13.3 121 275-400 2-140 (161)
194 cd04264 DUF619-NAGS DUF619 dom 93.5 0.32 7E-06 37.7 6.6 70 315-391 11-80 (99)
195 PF01853 MOZ_SAS: MOZ/SAS fami 93.3 0.4 8.6E-06 41.5 7.5 59 311-371 51-113 (188)
196 TIGR03245 arg_AOST_alph argini 93.2 0.71 1.5E-05 43.9 9.5 92 276-367 2-147 (336)
197 TIGR03244 arg_catab_AstA argin 93.2 0.72 1.6E-05 43.9 9.6 89 276-364 2-143 (336)
198 COG3916 LasI N-acyl-L-homoseri 93.0 1.8 3.8E-05 38.1 11.0 120 278-401 11-163 (209)
199 KOG2036|consensus 93.0 0.31 6.7E-06 50.1 7.2 85 337-424 613-747 (1011)
200 TIGR03243 arg_catab_AOST argin 92.8 0.87 1.9E-05 43.3 9.6 92 276-367 2-146 (335)
201 PHA00432 internal virion prote 92.6 1.3 2.7E-05 36.3 9.0 82 311-401 36-121 (137)
202 PF02799 NMT_C: Myristoyl-CoA: 92.5 3.2 7E-05 36.1 11.9 122 106-236 31-170 (190)
203 PRK02983 lysS lysyl-tRNA synth 92.5 3.3 7.1E-05 46.5 15.0 177 187-382 298-487 (1094)
204 KOG2535|consensus 92.3 0.21 4.5E-06 46.8 4.7 50 349-401 498-547 (554)
205 cd04265 DUF619-NAGS-U DUF619 d 92.3 0.91 2E-05 35.2 7.5 62 147-215 14-75 (99)
206 PF04768 DUF619: Protein of un 92.0 3.5 7.6E-05 35.5 11.6 113 107-228 26-143 (170)
207 PF04768 DUF619: Protein of un 91.9 6.2 0.00013 33.9 13.0 114 278-401 27-146 (170)
208 PHA01733 hypothetical protein 91.9 0.53 1.2E-05 39.1 6.1 87 311-401 45-132 (153)
209 KOG2036|consensus 91.6 0.69 1.5E-05 47.7 7.7 82 168-252 614-745 (1011)
210 KOG3698|consensus 91.4 1.2 2.6E-05 44.7 9.0 127 274-401 680-878 (891)
211 KOG3698|consensus 91.4 1.1 2.3E-05 45.1 8.6 129 102-231 678-878 (891)
212 PF04377 ATE_C: Arginine-tRNA- 91.4 2.8 6.1E-05 34.2 9.8 78 131-212 25-105 (128)
213 KOG2535|consensus 91.4 0.31 6.6E-06 45.7 4.6 49 179-230 498-546 (554)
214 PF01853 MOZ_SAS: MOZ/SAS fami 91.3 0.89 1.9E-05 39.4 7.1 48 152-201 66-113 (188)
215 PLN03238 probable histone acet 90.6 0.79 1.7E-05 42.3 6.5 59 311-371 126-188 (290)
216 PRK01305 arginyl-tRNA-protein 90.0 9.6 0.00021 34.7 13.0 80 130-213 129-211 (240)
217 COG2898 Uncharacterized conser 89.9 6.6 0.00014 40.0 12.9 176 186-381 271-459 (538)
218 KOG4601|consensus 89.9 2.1 4.5E-05 38.0 8.1 56 167-226 107-163 (264)
219 PRK01305 arginyl-tRNA-protein 89.3 17 0.00037 33.2 14.1 96 300-401 129-227 (240)
220 PLN03238 probable histone acet 89.3 1.2 2.6E-05 41.2 6.5 50 150-201 139-188 (290)
221 PTZ00064 histone acetyltransfe 89.3 0.88 1.9E-05 45.1 6.0 59 311-371 355-417 (552)
222 cd04265 DUF619-NAGS-U DUF619 d 89.2 1.4 3.1E-05 34.1 6.1 67 317-391 14-80 (99)
223 PRK14852 hypothetical protein; 89.0 2.2 4.8E-05 46.6 9.3 143 104-252 29-200 (989)
224 PF04377 ATE_C: Arginine-tRNA- 89.0 2.8 6E-05 34.2 7.9 94 301-400 25-121 (128)
225 PF11124 Pho86: Inorganic phos 87.1 9.7 0.00021 35.6 11.1 91 310-400 167-270 (304)
226 PLN03239 histone acetyltransfe 86.6 1.9 4.1E-05 41.0 6.3 59 311-371 184-246 (351)
227 PLN00104 MYST -like histone ac 86.6 1 2.2E-05 44.6 4.7 59 311-371 277-339 (450)
228 KOG2696|consensus 86.5 1.6 3.5E-05 41.5 5.8 62 322-385 199-262 (403)
229 COG5630 ARG2 Acetylglutamate s 86.2 2.4 5.1E-05 40.5 6.7 103 111-221 344-448 (495)
230 KOG2696|consensus 85.6 2.3 5E-05 40.5 6.3 61 153-215 200-262 (403)
231 COG2401 ABC-type ATPase fused 84.2 0.53 1.2E-05 45.8 1.5 62 168-230 241-307 (593)
232 PF09924 DUF2156: Uncharacteri 84.2 17 0.00036 34.4 11.8 105 104-212 133-248 (299)
233 PLN03239 histone acetyltransfe 83.9 2.9 6.3E-05 39.9 6.2 50 150-201 197-246 (351)
234 PTZ00064 histone acetyltransfe 83.3 2.7 5.9E-05 41.8 5.9 50 150-201 368-417 (552)
235 KOG2779|consensus 83.0 9.1 0.0002 36.4 8.9 101 271-371 78-200 (421)
236 PRK14852 hypothetical protein; 82.0 8.8 0.00019 42.1 9.7 128 274-405 29-185 (989)
237 PF13444 Acetyltransf_5: Acety 80.8 3.5 7.5E-05 32.0 4.8 51 140-190 28-100 (101)
238 COG2401 ABC-type ATPase fused 80.5 1.8 4E-05 42.3 3.6 60 339-399 242-306 (593)
239 COG3138 AstA Arginine/ornithin 80.1 3.8 8.3E-05 37.7 5.3 87 274-360 2-141 (336)
240 PF11124 Pho86: Inorganic phos 79.5 23 0.0005 33.2 10.2 91 140-230 167-270 (304)
241 PLN00104 MYST -like histone ac 78.7 3 6.5E-05 41.3 4.5 50 150-201 290-339 (450)
242 COG5630 ARG2 Acetylglutamate s 78.5 7.5 0.00016 37.3 6.8 111 281-399 344-458 (495)
243 KOG2747|consensus 78.2 3.4 7.4E-05 40.1 4.7 60 310-371 232-293 (396)
244 KOG4601|consensus 78.1 4.6 9.9E-05 35.9 5.0 53 337-393 107-159 (264)
245 PF02474 NodA: Nodulation prot 76.7 17 0.00036 31.0 7.7 139 280-423 16-178 (196)
246 PF02799 NMT_C: Myristoyl-CoA: 75.1 57 0.0012 28.5 12.6 122 276-406 31-170 (190)
247 PF13444 Acetyltransf_5: Acety 72.6 9.2 0.0002 29.6 5.1 51 310-360 28-100 (101)
248 PHA02769 hypothetical protein; 72.6 3.3 7.1E-05 32.3 2.4 44 356-402 94-140 (154)
249 PRK04531 acetylglutamate kinas 70.7 26 0.00056 34.7 8.8 96 106-215 256-351 (398)
250 KOG2747|consensus 70.5 6.5 0.00014 38.2 4.5 33 169-201 261-293 (396)
251 PF02474 NodA: Nodulation prot 68.3 10 0.00023 32.2 4.7 111 110-225 16-137 (196)
252 PF04339 DUF482: Protein of un 67.2 43 0.00093 32.8 9.4 113 108-231 209-329 (370)
253 PRK04531 acetylglutamate kinas 66.6 30 0.00066 34.2 8.4 106 280-400 260-367 (398)
254 PHA00771 head assembly protein 65.0 72 0.0016 25.7 9.3 63 344-408 67-129 (151)
255 cd04266 DUF619-NAGS-FABP DUF61 63.0 56 0.0012 25.7 7.6 62 148-215 15-82 (108)
256 COG5027 SAS2 Histone acetyltra 61.6 5.3 0.00011 37.8 1.9 45 152-198 248-292 (395)
257 PF02388 FemAB: FemAB family; 61.2 26 0.00056 34.8 6.9 121 299-423 19-160 (406)
258 PF11090 DUF2833: Protein of u 61.2 27 0.00059 26.1 5.2 27 203-229 56-82 (86)
259 COG5027 SAS2 Histone acetyltra 60.2 5 0.00011 38.0 1.5 54 310-365 232-289 (395)
260 PHA02769 hypothetical protein; 59.0 8.7 0.00019 30.0 2.4 39 191-232 102-140 (154)
261 COG2935 Putative arginyl-tRNA: 57.8 50 0.0011 30.0 7.3 60 150-213 159-218 (253)
262 COG2348 Peptidoglycan interpep 57.2 1.3E+02 0.0028 29.9 10.7 92 142-236 40-149 (418)
263 PRK00756 acyltransferase NodA; 56.2 87 0.0019 26.6 7.9 81 337-422 84-177 (196)
264 COG2898 Uncharacterized conser 56.0 50 0.0011 33.9 7.9 64 144-210 395-458 (538)
265 PRK02983 lysS lysyl-tRNA synth 53.7 1.1E+02 0.0023 34.9 10.7 59 150-212 429-487 (1094)
266 cd04266 DUF619-NAGS-FABP DUF61 53.6 63 0.0014 25.4 6.4 75 318-398 15-96 (108)
267 COG5092 NMT1 N-myristoyl trans 50.3 1.1E+02 0.0024 28.8 8.4 96 276-371 84-198 (451)
268 PF12261 T_hemolysin: Thermost 46.5 1.1E+02 0.0023 26.6 7.4 75 148-230 41-141 (179)
269 PRK00756 acyltransferase NodA; 46.0 1.2E+02 0.0026 25.8 7.2 53 167-224 84-136 (196)
270 COG3146 Uncharacterized protei 45.6 30 0.00065 32.9 4.1 208 173-405 120-348 (387)
271 KOG3014|consensus 45.5 1.1E+02 0.0024 27.9 7.4 56 168-223 183-238 (257)
272 PF12162 STAT1_TAZ2bind: STAT1 44.2 5.7 0.00012 21.4 -0.4 15 8-22 7-21 (23)
273 KOG3014|consensus 43.2 1.3E+02 0.0028 27.4 7.5 48 337-384 182-230 (257)
274 PF11090 DUF2833: Protein of u 43.0 75 0.0016 23.8 5.0 43 355-400 41-83 (86)
275 PF12261 T_hemolysin: Thermost 42.5 1.4E+02 0.003 26.0 7.5 76 318-401 41-142 (179)
276 COG2935 Putative arginyl-tRNA: 42.4 1.6E+02 0.0034 26.9 7.9 73 320-398 159-231 (253)
277 PF07395 Mig-14: Mig-14; Inte 41.2 35 0.00075 31.5 3.8 96 276-371 129-237 (264)
278 COG5653 Protein involved in ce 40.7 1.8E+02 0.0039 28.7 8.6 85 294-382 249-338 (406)
279 PRK15312 antimicrobial resista 37.8 44 0.00096 31.2 3.9 72 300-371 188-267 (298)
280 KOG4387|consensus 35.6 1.9E+02 0.004 25.0 6.9 77 345-423 106-185 (191)
281 cd07235 MRD Mitomycin C resist 34.1 40 0.00087 26.4 2.8 24 206-230 4-27 (122)
282 cd03173 DUF619-like DUF619 dom 33.2 2.3E+02 0.0049 21.9 8.3 58 150-215 17-74 (98)
283 COG5653 Protein involved in ce 29.2 3.6E+02 0.0079 26.6 8.7 84 125-212 250-338 (406)
284 PF11633 SUD-M: Single-strande 28.9 1.7E+02 0.0036 24.0 5.3 50 352-405 17-66 (142)
285 cd03173 DUF619-like DUF619 dom 28.7 2.8E+02 0.006 21.4 6.7 63 320-391 17-79 (98)
286 cd08353 Glo_EDI_BRP_like_7 Thi 26.2 53 0.0012 26.6 2.3 28 203-231 4-31 (142)
287 COG2348 Peptidoglycan interpep 25.4 6.3E+02 0.014 25.2 9.8 94 312-407 40-150 (418)
288 cd09012 Glo_EDI_BRP_like_24 Th 24.5 1E+02 0.0023 24.1 3.7 16 215-230 12-27 (124)
289 PF12953 DUF3842: Domain of un 23.7 1.4E+02 0.0031 24.3 4.1 46 180-230 7-52 (131)
290 PF07395 Mig-14: Mig-14; Inte 23.5 2.7E+02 0.0059 25.8 6.4 97 104-201 130-237 (264)
291 PF06557 DUF1122: Protein of u 23.0 4.8E+02 0.01 22.3 8.6 90 310-406 16-123 (170)
292 cd08356 Glo_EDI_BRP_like_17 Th 20.6 77 0.0017 24.6 2.1 21 385-405 13-33 (113)
293 COG3473 Maleate cis-trans isom 20.4 1.6E+02 0.0036 26.2 4.1 38 363-401 109-149 (238)
No 1
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.97 E-value=3.1e-29 Score=238.18 Aligned_cols=269 Identities=14% Similarity=0.181 Sum_probs=202.0
Q ss_pred eeCCcccHHHHHHHhHhcCC----ccccHHHHHHHHhc---CCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCC
Q psy17026 107 GDVTPHNIKQLKRLNTVVFP----VSYNEKFYKDVLEA---GELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSP 179 (435)
Q Consensus 107 r~~~~~d~~~l~~l~~~~~~----~~~~~~~~~~~l~~---~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~ 179 (435)
.+++++|++++.+|...++. .+|+.+....+... ....+++.++|++||++.+...... ..++..++|+|+
T Consensus 4 ~~l~~~d~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~--~~~~~~l~V~p~ 81 (292)
T TIGR03448 4 AALDADLRRDVRELLAAATAVDGVAPVSEQVLRGLREPGAGHTRHLVAVDSDPIVGYANLVPARGT--DPAMAELVVHPA 81 (292)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHhhccccCCCCceEEEEEECCEEEEEEEEEcCCCC--cceEEEEEECHh
Confidence 46789999999999876642 35776655443221 2357788889999999988765432 257899999999
Q ss_pred ccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeeccccCCCCC
Q psy17026 180 YRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRNKVPNGE 259 (435)
Q Consensus 180 ~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~~~~~~~ 259 (435)
|||+|||++|++++++.+. ..+.+.+..+|..|++||+++||+.... .+.|...+.....+.
T Consensus 82 ~rg~GiG~~Ll~~~~~~~~-----~~~~~~~~~~n~~a~~fy~~~Gf~~~~~------------~~~~~~~l~~~~~~~- 143 (292)
T TIGR03448 82 HRRRGIGRALIRALLAKGG-----GRLRVWAHGDLPAARALASRLGLVPTRE------------LLQMRRPLRDLELPE- 143 (292)
T ss_pred hcCCCHHHHHHHHHHHhcc-----CceEEEEcCCCHHHHHHHHHCCCEEccE------------EEEEEecCCccccCC-
Confidence 9999999999999998753 4577888899999999999999997654 344555554311111
Q ss_pred CCCCCccccCCCCcEEEEcCCc-hhHHHHHHHhHhhCCC-----CCCHHHHHHHHh----cCceEEEEEe--CCEEEEEE
Q psy17026 260 EHKDGNVFTMTRPKIELGDVTP-HNIKQLKRLNTVVFPV-----SYNEKFYKDVLE----AGELAKLAYY--NDIVIGAV 327 (435)
Q Consensus 260 ~~~~~~~~~~~~~~~~ir~~~~-~d~~~~~~l~~~~~~~-----~~~~~~~~~~~~----~~~~~~v~~~--~~~ivG~~ 327 (435)
.....++++++++. .|...+.++....|.. .|....+..... .+..++++.. ++++|||+
T Consensus 144 --------~~~~~g~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vG~~ 215 (292)
T TIGR03448 144 --------PQVPDGVTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFH 215 (292)
T ss_pred --------CCCCCCeEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEECCCCcEEEEE
Confidence 11346788999864 4777887887776642 465554443322 2344567766 68999997
Q ss_pred EEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeec
Q psy17026 328 CCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQH 404 (435)
Q Consensus 328 ~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~ 404 (435)
.+.........+++..++|+|+|||+|+|++|+..+++++++.| +..+.+.+...|..+++||+|+||+..++...
T Consensus 216 ~~~~~~~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g-~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~ 291 (292)
T TIGR03448 216 WTKVHPDEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARG-LPAVMLYVEADNEAAVRTYEKLGFTVAEVDVA 291 (292)
T ss_pred EEEecCCCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEEEeCCCHHHHHHHHHcCCEEcccccc
Confidence 66654433345678889999999999999999999999999988 99999999999999999999999999887544
No 2
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.92 E-value=5.2e-23 Score=191.96 Aligned_cols=231 Identities=14% Similarity=0.185 Sum_probs=186.5
Q ss_pred CCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeeccccCCCCCC-
Q psy17026 182 RLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRNKVPNGEE- 260 (435)
Q Consensus 182 g~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~~~~~~~~- 260 (435)
..|-...|+..+.+.|++.| +.+|++.|.. ....+|+++||..+++++.||. ++|++.|.+.+.........
T Consensus 19 ~~~~~~~~~~~~~~~a~~~~-~~ki~~~~~~---~~~~~~~~~g~~~e~~i~~~f~---g~~~~~~~~~~~~~r~~~~~~ 91 (266)
T TIGR03827 19 TGNDVEALIPDLDALAKKEG-YTKIIAKVPG---SDKPLFEERGYLEEAKIPGYFN---GHDAYFMSKYLDEDRRISSHS 91 (266)
T ss_pred CCccHHHHHHHHHHHHHHcC-CcEEEEEccH---HHHHHHHHCCCeEEEecccccC---CCceEEEEEcCchHhCCCCcH
Confidence 34568899999999999999 9999999998 4589999999999999999996 46899999999874332221
Q ss_pred -----------CCCCccccCCCCcEEEEcCCchhHHHHHHHhHhhCCC---CC-CHHHHHHHHhcCceEEEEEeCCEEEE
Q psy17026 261 -----------HKDGNVFTMTRPKIELGDVTPHNIKQLKRLNTVVFPV---SY-NEKFYKDVLEAGELAKLAYYNDIVIG 325 (435)
Q Consensus 261 -----------~~~~~~~~~~~~~~~ir~~~~~d~~~~~~l~~~~~~~---~~-~~~~~~~~~~~~~~~~v~~~~~~ivG 325 (435)
.+...........+.||+++++|++.+.++....+.. ++ ...++...+..+..++++..+|++||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~IR~a~~~D~~~l~~L~~~v~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~g~iVG 171 (266)
T TIGR03827 92 EKEDEVLEAALSKPRKPKIALPEGFTLRIATEDDADAMAALYRKVFPTYPFPIHDPAYLLETMKSNVVYFGVEDGGKIIA 171 (266)
T ss_pred HHHHHHHHHHHhccCCCccCCCCceEEEECCHHHHHHHHHHHHHHhccCCCCccCHHHHHHHhcCCcEEEEEEECCEEEE
Confidence 0011111114567899999999999999999887642 22 23445555555566678888999999
Q ss_pred EEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecc
Q psy17026 326 AVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHY 405 (435)
Q Consensus 326 ~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 405 (435)
++.+...... ..++|..++|+|+|||+|+|+.|++.+++++++.| +..+.+.+...|.+++++|+|+||+.+|+.++.
T Consensus 172 ~~~~~~~~~~-~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g-~~~l~~~~~~~n~~a~~ly~k~GF~~~G~l~n~ 249 (266)
T TIGR03827 172 LASAEMDPEN-GNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKG-IRTAYTIARASSYGMNITFARLGYAYGGTLVNN 249 (266)
T ss_pred EEEEecCCCC-CcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCC-CcEEEeehhhcchhHHHHHHHcCCccccEEeec
Confidence 9887544433 56789999999999999999999999999999998 999999999999999999999999999998776
Q ss_pred -cccccccceeeeeecc
Q psy17026 406 -YKRIEPADAYVLQKTL 421 (435)
Q Consensus 406 -y~~~~~~~~~~m~~~l 421 (435)
+.++...|..++.|.|
T Consensus 250 ~~i~G~~~d~~i~~k~l 266 (266)
T TIGR03827 250 TNISGGFESMNIWYKQL 266 (266)
T ss_pred ceecCCcccceeeeecC
Confidence 5566788998888765
No 3
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.78 E-value=1.4e-17 Score=141.23 Aligned_cols=144 Identities=21% Similarity=0.387 Sum_probs=118.3
Q ss_pred ceEEeeCCcccHHHHHHHhHhcCCccccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccC
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRR 182 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg 182 (435)
++.||+++++|++.+.++.......+|+...+..........+++..+|++||++.+..... .+.+..++|+|+|||
T Consensus 1 ~~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~---~~~~~~i~v~~~~rg 77 (146)
T PRK09491 1 MNTISSLTPADLPAAYHIEQRAHAFPWSEKTFASNQGERYLNLKLTVNGQMAAFAITQVVLD---EATLFNIAVDPDYQR 77 (146)
T ss_pred CcchhcCChhhhHHHHHHHHhcCCCCCCHHHHHHHHhcCceEEEEEECCeEEEEEEEEeecC---ceEEEEEEECHHHcc
Confidence 35789999999999999987777667776555443333334456678999999998876543 356888999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccc--cCCCCceEEEEeec
Q psy17026 183 LGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYK--RIEPADAYVLQKTL 251 (435)
Q Consensus 183 ~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~--~~~~~d~~~m~~~l 251 (435)
+|+|+.+++++++.+++.| +..+.+.+...|.+|++||+|+||+..+..+.++. ++ ..|.+.|.+.|
T Consensus 78 ~G~g~~ll~~~~~~~~~~~-~~~~~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~~~~~~~-~~d~~~~~~~~ 146 (146)
T PRK09491 78 QGLGRALLEHLIDELEKRG-VATLWLEVRASNAAAIALYESLGFNEVTIRRNYYPTADG-REDAIIMALPL 146 (146)
T ss_pred CCHHHHHHHHHHHHHHHCC-CcEEEEEEccCCHHHHHHHHHcCCEEeeeeeccccCCCC-ceeEEEEeccC
Confidence 9999999999999999988 99999999999999999999999999998888863 34 77888887643
No 4
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.76 E-value=5.4e-17 Score=137.66 Aligned_cols=144 Identities=21% Similarity=0.389 Sum_probs=117.4
Q ss_pred EEEEcCCchhHHHHHHHhHhhCCCCCCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccC
Q psy17026 274 IELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRL 353 (435)
Q Consensus 274 ~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgk 353 (435)
++||+++++|++.+..+.......+|....+..........+.+..++++||++.+..... ...+..++|+|+|||+
T Consensus 2 ~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~---~~~~~~i~v~~~~rg~ 78 (146)
T PRK09491 2 NTISSLTPADLPAAYHIEQRAHAFPWSEKTFASNQGERYLNLKLTVNGQMAAFAITQVVLD---EATLFNIAVDPDYQRQ 78 (146)
T ss_pred cchhcCChhhhHHHHHHHHhcCCCCCCHHHHHHHHhcCceEEEEEECCeEEEEEEEEeecC---ceEEEEEEECHHHccC
Confidence 4689999999999999987776667776655443333333445667899999998866543 3568889999999999
Q ss_pred ChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccc-cccccceeeeeecc
Q psy17026 354 GIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYK-RIEPADAYVLQKTL 421 (435)
Q Consensus 354 Glg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~-~~~~~~~~~m~~~l 421 (435)
|+|+.+++.+++.+++.+ +..+.+.+...|.++.+||+|+||+..+..+.++. ..+..|.+.|.+-|
T Consensus 79 G~g~~ll~~~~~~~~~~~-~~~~~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~d~~~~~~~~ 146 (146)
T PRK09491 79 GLGRALLEHLIDELEKRG-VATLWLEVRASNAAAIALYESLGFNEVTIRRNYYPTADGREDAIIMALPL 146 (146)
T ss_pred CHHHHHHHHHHHHHHHCC-CcEEEEEEccCCHHHHHHHHHcCCEEeeeeeccccCCCCceeEEEEeccC
Confidence 999999999999998888 99999999999999999999999999999888863 23378888888754
No 5
>KOG3138|consensus
Probab=99.75 E-value=1.8e-18 Score=147.72 Aligned_cols=161 Identities=40% Similarity=0.669 Sum_probs=121.2
Q ss_pred CCc-eeecCCCccchhhhcccceEEEecccchhhHHHHhhhhhhhhhccccceEEEEEEecccccceecceeeeeecccc
Q psy17026 3 RPK-IELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKKYDRENVILTFVLQREMVDFVSVRQEVGLQFPLR 81 (435)
Q Consensus 3 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (435)
++. ++++.++|+||+|+|.||+.|||++|.+.||.+.+.++.|..-.-..+..-.....
T Consensus 13 ~~e~~~l~~it~~nl~~~~~l~~~~fP~~y~~kfy~~~~~~~~~~~~A~~~~~~v~a~~~-------------------- 72 (187)
T KOG3138|consen 13 ENELIELRLITPNNLKQLKQLNEDIFPISYVDKFYPDVLSNGDLTQLAYYNEIAVGAVAC-------------------- 72 (187)
T ss_pred cCcceeeccCCcchHHHHHHHhccccCcchHHHHHHHHHhcCCHHHhhhhccccccceee--------------------
Confidence 455 89999999999999999999999999999999999977765431111000000000
Q ss_pred cccccccCccccccccccCCCceEEeeCCcccHHHHHHHhHhcCCccccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEe
Q psy17026 82 WKNSITRNENVLFGMTKYDRPKIELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRI 161 (435)
Q Consensus 82 w~~~~~~~~~~~~~~~~~~~~~i~ir~~~~~d~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~ 161 (435)
...... .... ++.|
T Consensus 73 ----------------------------k~~~~~-------------------~~~~-------------r~~~------ 86 (187)
T KOG3138|consen 73 ----------------------------KLIKFV-------------------QNAK-------------RLFG------ 86 (187)
T ss_pred ----------------------------eehhhh-------------------hhhh-------------hhhc------
Confidence 000000 0000 0000
Q ss_pred ecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCC
Q psy17026 162 DPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEP 241 (435)
Q Consensus 162 ~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~ 241 (435)
. +..+|..+.|.|.||.+|||+.|++++.+++.+...+..+++++...|..++.||++.||+...+...||.....
T Consensus 87 -~---~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~~~y~~~~~ 162 (187)
T KOG3138|consen 87 -N---RVIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLKNYYSILGP 162 (187)
T ss_pred -c---ceeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeeccccccccccC
Confidence 0 135799999999999999999999999999998765788999999999999999999999999999999987777
Q ss_pred CceEEEEeeccc
Q psy17026 242 ADAYVLQKTLRN 253 (435)
Q Consensus 242 ~d~~~m~~~l~~ 253 (435)
.+...|.+.+..
T Consensus 163 ~~~~~l~~~~~~ 174 (187)
T KOG3138|consen 163 PDDSFLRKLLIH 174 (187)
T ss_pred cchhhhhhheec
Confidence 777777777764
No 6
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.74 E-value=6.6e-17 Score=150.89 Aligned_cols=150 Identities=14% Similarity=0.183 Sum_probs=125.3
Q ss_pred CCCceEEeeCCcccHHHHHHHhHhcCC---ccc-cHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEE
Q psy17026 100 DRPKIELGDVTPHNIKQLKRLNTVVFP---VSY-NEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLG 175 (435)
Q Consensus 100 ~~~~i~ir~~~~~d~~~l~~l~~~~~~---~~~-~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~ 175 (435)
....+.||+++++|++.+.+|...++. .++ ..+++...+.....++++..+|++||++++...... ..++|..++
T Consensus 112 ~~~~~~IR~a~~~D~~~l~~L~~~v~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~g~iVG~~~~~~~~~~-~~~eI~~i~ 190 (266)
T TIGR03827 112 LPEGFTLRIATEDDADAMAALYRKVFPTYPFPIHDPAYLLETMKSNVVYFGVEDGGKIIALASAEMDPEN-GNAEMTDFA 190 (266)
T ss_pred CCCceEEEECCHHHHHHHHHHHHHHhccCCCCccCHHHHHHHhcCCcEEEEEEECCEEEEEEEEecCCCC-CcEEEEEEE
Confidence 345689999999999999999888764 222 235556666656667888899999999987544332 468899999
Q ss_pred eCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeeccc-ccCCCCceEEEEeec
Q psy17026 176 CLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYY-KRIEPADAYVLQKTL 251 (435)
Q Consensus 176 V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~-~~~~~~d~~~m~~~l 251 (435)
|+|+|||+|+|+.|++++++++++.| +..+++.+...|.+++++|+|+||+..|++.+.. ..|...|..+|.+.|
T Consensus 191 V~P~yRG~GiG~~Ll~~l~~~a~~~g-~~~l~~~~~~~n~~a~~ly~k~GF~~~G~l~n~~~i~G~~~d~~i~~k~l 266 (266)
T TIGR03827 191 TLPEYRGKGLAKILLAAMEKEMKEKG-IRTAYTIARASSYGMNITFARLGYAYGGTLVNNTNISGGFESMNIWYKQL 266 (266)
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHHCC-CcEEEeehhhcchhHHHHHHHcCCccccEEeecceecCCcccceeeeecC
Confidence 99999999999999999999999999 9999999999999999999999999999998774 467778888887754
No 7
>KOG3139|consensus
Probab=99.74 E-value=1e-16 Score=130.84 Aligned_cols=136 Identities=23% Similarity=0.376 Sum_probs=113.1
Q ss_pred hHHHHHHHhHhhCCCCCCHHHHHHHHh-cCceEEEEEeCCE-EEEEEEEEecCCCC-CeEEEEEEEECCCcccCChHHHH
Q psy17026 283 NIKQLKRLNTVVFPVSYNEKFYKDVLE-AGELAKLAYYNDI-VIGAVCCRIDPNNG-RKLYIMTLGCLSPYRRLGIGSMM 359 (435)
Q Consensus 283 d~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~-ivG~~~~~~~~~~~-~~~~i~~i~V~p~~rgkGlg~~L 359 (435)
-+..+.++....++++++.-.+.-... .+..++++.+++. .||++.|....... ..++|..++|+++|||+|||++|
T Consensus 26 ~l~~im~Li~k~lsepyS~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aL 105 (165)
T KOG3139|consen 26 YLADIMRLIDKDLSEPYSIYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKAL 105 (165)
T ss_pred HHHHHHHHHhhhcCchhHHHHHHhcccCCceEEEEEEcCCCceEEEEEEeccccCCcceEEEEEEEechhhccccHHHHH
Confidence 344577777777888877654433333 4667788887655 79999998777654 67999999999999999999999
Q ss_pred HHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccccccccceeeeeecc
Q psy17026 360 LEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTL 421 (435)
Q Consensus 360 l~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~~~~m~~~l 421 (435)
++.+++.+.++| +..+.|++...|.+|.++|+++||+..++...||.++. |++.|.+-+
T Consensus 106 vr~aId~m~~~g-~~eVvLeTe~~n~~A~~LY~sLGF~r~~r~~~YYlng~--dA~rl~L~~ 164 (165)
T KOG3139|consen 106 VRKAIDAMRSRG-YSEVVLETEVTNLSALRLYESLGFKRDKRLFRYYLNGM--DALRLKLFF 164 (165)
T ss_pred HHHHHHHHHHCC-CcEEEEeccccchHHHHHHHhcCceEecceeEEEECCc--ceEEEEeec
Confidence 999999999999 99999999999999999999999999999999999644 888877643
No 8
>KOG3139|consensus
Probab=99.73 E-value=1.6e-16 Score=129.67 Aligned_cols=139 Identities=22% Similarity=0.372 Sum_probs=115.7
Q ss_pred CcccHHHHHHHhHhcCCccccHHHHHHHHh-cCCeEEEEEECCe-EEEEEEEEeecCCC-CeEEEEEEEeCCCccCCCHH
Q psy17026 110 TPHNIKQLKRLNTVVFPVSYNEKFYKDVLE-AGELAKLAYYNDI-VIGAVCCRIDPNNG-RKLYIMTLGCLSPYRRLGIG 186 (435)
Q Consensus 110 ~~~d~~~l~~l~~~~~~~~~~~~~~~~~l~-~~~~~~v~~~~g~-iVG~~~~~~~~~~~-~~~~i~~l~V~p~~rg~GiG 186 (435)
....++.+.+|....+++|++.-....... .+...+++.+++. .||++.+......+ ..++|.+++|+++|||+|||
T Consensus 23 ~~~~l~~im~Li~k~lsepyS~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg 102 (165)
T KOG3139|consen 23 AEEYLADIMRLIDKDLSEPYSIYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIG 102 (165)
T ss_pred HHHHHHHHHHHHhhhcCchhHHHHHHhcccCCceEEEEEEcCCCceEEEEEEeccccCCcceEEEEEEEechhhccccHH
Confidence 445566788888888899988766555544 3455666766555 69999998777655 57999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeec
Q psy17026 187 SMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTL 251 (435)
Q Consensus 187 ~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l 251 (435)
++|++.+++.++.+| +..+.|++...|.+|.++|+++||...++...||-++ .|++.|...+
T Consensus 103 ~aLvr~aId~m~~~g-~~eVvLeTe~~n~~A~~LY~sLGF~r~~r~~~YYlng--~dA~rl~L~~ 164 (165)
T KOG3139|consen 103 KALVRKAIDAMRSRG-YSEVVLETEVTNLSALRLYESLGFKRDKRLFRYYLNG--MDALRLKLFF 164 (165)
T ss_pred HHHHHHHHHHHHHCC-CcEEEEeccccchHHHHHHHhcCceEecceeEEEECC--cceEEEEeec
Confidence 999999999999999 9999999999999999999999999999999999754 3787776543
No 9
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.73 E-value=7.8e-17 Score=136.22 Aligned_cols=128 Identities=19% Similarity=0.196 Sum_probs=103.3
Q ss_pred CceEEeeCCcccHHHHHHHhHhcCCccccH----HHHHHHHhc-CCeEEEEEECCeEEEEEEEEeecCCC---CeEEEEE
Q psy17026 102 PKIELGDVTPHNIKQLKRLNTVVFPVSYNE----KFYKDVLEA-GELAKLAYYNDIVIGAVCCRIDPNNG---RKLYIMT 173 (435)
Q Consensus 102 ~~i~ir~~~~~d~~~l~~l~~~~~~~~~~~----~~~~~~l~~-~~~~~v~~~~g~iVG~~~~~~~~~~~---~~~~i~~ 173 (435)
+++.||+++++|++.+..+.....+..++. +.+...+.. +..++++..+|++||++.+....... ..++|..
T Consensus 2 ~~~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~ 81 (144)
T PRK10146 2 PACELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQE 81 (144)
T ss_pred CccEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccchhheehe
Confidence 467899999999999999977665544432 223333433 44567888999999999987543211 2357889
Q ss_pred EEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 174 LGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 174 l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
++|+|++||+|+|+.|++++++.|++.| +..+.+.+...|..|++||+++||+..+
T Consensus 82 l~v~p~~rg~GiG~~Ll~~~~~~a~~~~-~~~i~l~~~~~n~~a~~fY~~~Gf~~~~ 137 (144)
T PRK10146 82 LVVMPQARGLNVGSKLLAWAEEEARQAG-AEMTELSTNVKRHDAHRFYLREGYEQSH 137 (144)
T ss_pred eEECHHHcCCCHHHHHHHHHHHHHHHcC-CcEEEEecCCCchHHHHHHHHcCCchhh
Confidence 9999999999999999999999999998 9999999999999999999999998654
No 10
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.71 E-value=1.8e-15 Score=134.70 Aligned_cols=170 Identities=21% Similarity=0.310 Sum_probs=129.4
Q ss_pred ccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeeccccCCCCCCCCCCccccCCCCcEEEEcCCch
Q psy17026 203 FDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRNKVPNGEEHKDGNVFTMTRPKIELGDVTPH 282 (435)
Q Consensus 203 ~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~ 282 (435)
+.-+.+-+...|..-..+.+..||+.... .+.|..++.... .+..||+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~------------~~~~~~~~~~~~----------------~~~~iR~a~~~ 55 (194)
T PRK10975 4 FSLVQAKVAASDTALLDALQQLGFQLVEG------------EVDFALPVGNAS----------------DTTGARVATET 55 (194)
T ss_pred cceEEEEechhhhHHHHHHHhcCCEeeee------------EEEEEeeccccC----------------CCCCcccCCcc
Confidence 56678888889988899999999996653 345666664311 12357899999
Q ss_pred hHHHHHHHhHhhCCC-----CC-CH----HHHHHHHh----c--CceEEEEE-eCCEEEEEEEEEecCCCCCeEEEEEEE
Q psy17026 283 NIKQLKRLNTVVFPV-----SY-NE----KFYKDVLE----A--GELAKLAY-YNDIVIGAVCCRIDPNNGRKLYIMTLG 345 (435)
Q Consensus 283 d~~~~~~l~~~~~~~-----~~-~~----~~~~~~~~----~--~~~~~v~~-~~~~ivG~~~~~~~~~~~~~~~i~~i~ 345 (435)
|++.+.++....+.. +| .. ..+..++. . ...++++. .++++||++.+..... ..+++..++
T Consensus 56 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~~~--~~~~i~~~~ 133 (194)
T PRK10975 56 DIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLRELND--TDARIGLLA 133 (194)
T ss_pred cHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEecCC--CceEEEEEE
Confidence 999999998776532 23 21 12222221 1 22344554 4678999998875443 336788899
Q ss_pred ECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEee
Q psy17026 346 CLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQ 403 (435)
Q Consensus 346 V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~ 403 (435)
|+|+|||+|+|++|++.+++++++.| ++.+.+.|...|..+++||+|+||+.+++..
T Consensus 134 V~p~~rg~Gig~~Ll~~~~~~a~~~g-~~~i~l~v~~~N~~a~~~yek~Gf~~~~~~~ 190 (194)
T PRK10975 134 VFPGAQGRGIGARLMQAALNWCQARG-LTRLRVATQMGNLAALRLYIRSGANIESTAY 190 (194)
T ss_pred EChhhcCCCHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcHHHHHHHHHCCCeEeEEEe
Confidence 99999999999999999999999988 9999999999999999999999999999865
No 11
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.71 E-value=3.7e-16 Score=129.54 Aligned_cols=130 Identities=24% Similarity=0.445 Sum_probs=109.6
Q ss_pred hHHHHHHHhHhhCCCCCCHHHHHHHHhcCc-eEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHH
Q psy17026 283 NIKQLKRLNTVVFPVSYNEKFYKDVLEAGE-LAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLE 361 (435)
Q Consensus 283 d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~ 361 (435)
|++.+.++....|+.+|....+...+.... .++++..++++||++.+..... ..++..++|+|+|||+|+|++|++
T Consensus 1 d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~---~~~i~~~~v~~~~rg~G~g~~ll~ 77 (131)
T TIGR01575 1 DLKAVLEIEAAAFAFPWTEAQFAEELANYHLCYLLARIGGKVVGYAGVQIVLD---EAHILNIAVKPEYQGQGIGRALLR 77 (131)
T ss_pred CHHHHHHHHHhhCCCCCCHHHHHHHhcCCCceEEEEecCCeEEEEEEEEecCC---CeEEEEEEECHHHcCCCHHHHHHH
Confidence 567888888899998988887777765444 3445566899999998776553 357889999999999999999999
Q ss_pred HHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccccccccceeee
Q psy17026 362 HILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVL 417 (435)
Q Consensus 362 ~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~~~~m 417 (435)
.+++++.+.+ +..+.+.+...|..+++||+++||+.++....|+.++. .|.++|
T Consensus 78 ~~~~~~~~~~-~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~~~~~~~~~~-~~~~~~ 131 (131)
T TIGR01575 78 ELIDEAKGRG-VNEIFLEVRVSNIAAQALYKKLGFNEIAIRRNYYPDPG-EDAIVM 131 (131)
T ss_pred HHHHHHHHcC-CCeEEEEEecccHHHHHHHHHcCCCccccccccccCCC-cccccC
Confidence 9999999988 99999999999999999999999999999998886534 677665
No 12
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.71 E-value=1e-15 Score=131.97 Aligned_cols=146 Identities=20% Similarity=0.360 Sum_probs=111.4
Q ss_pred ceEEeeCCcccHHHHHHHhHhc--C-----CccccHHHHHHHHhc--CCeEEEEEECCeEEEEEEEEeecCCC-CeEEEE
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVV--F-----PVSYNEKFYKDVLEA--GELAKLAYYNDIVIGAVCCRIDPNNG-RKLYIM 172 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~--~-----~~~~~~~~~~~~l~~--~~~~~v~~~~g~iVG~~~~~~~~~~~-~~~~i~ 172 (435)
.+.||+++++|++.+.++.... + ....+.+.+...+.. +...+++..+|++||++++....... ......
T Consensus 3 ~i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 82 (162)
T PRK10140 3 EIVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADF 82 (162)
T ss_pred ccEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEecccccccceEEEE
Confidence 4789999999999999997642 1 111233334444332 23567888899999999987543211 112223
Q ss_pred EEEeCCCccCCCHHHHHHHHHHHHHHh-cCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeeccc-ccCCCCceEEEEe
Q psy17026 173 TLGCLSPYRRLGIGSMMLEHILNYVEK-DGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYY-KRIEPADAYVLQK 249 (435)
Q Consensus 173 ~l~V~p~~rg~GiG~~Ll~~~~~~a~~-~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~-~~~~~~d~~~m~~ 249 (435)
.++|+|+|||+|+|+.|++.+++++++ .| +.++.+.|..+|.+|++||+|+||+..+..+.++ .++...|.+.|.+
T Consensus 83 ~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~-~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~~~~~~~~d~~~~~~ 160 (162)
T PRK10140 83 GICVDSRWKNRGVASALMREMIEMCDNWLR-VDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMAR 160 (162)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHhhCC-ccEEEEEEEcCCHHHHHHHHHCCCEEEeecccceeeCCeEEEEEEEEe
Confidence 589999999999999999999999998 46 9999999999999999999999999999988775 4555667777765
No 13
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.71 E-value=3.6e-16 Score=129.60 Aligned_cols=130 Identities=24% Similarity=0.445 Sum_probs=109.4
Q ss_pred cHHHHHHHhHhcCCccccHHHHHHHHhcCC-eEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHH
Q psy17026 113 NIKQLKRLNTVVFPVSYNEKFYKDVLEAGE-LAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLE 191 (435)
Q Consensus 113 d~~~l~~l~~~~~~~~~~~~~~~~~l~~~~-~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~ 191 (435)
|++.+.++...+|+.+|+...+...+.... .++++..++++||++.+..... ..++..++|+|+|||+|+|++|++
T Consensus 1 d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~---~~~i~~~~v~~~~rg~G~g~~ll~ 77 (131)
T TIGR01575 1 DLKAVLEIEAAAFAFPWTEAQFAEELANYHLCYLLARIGGKVVGYAGVQIVLD---EAHILNIAVKPEYQGQGIGRALLR 77 (131)
T ss_pred CHHHHHHHHHhhCCCCCCHHHHHHHhcCCCceEEEEecCCeEEEEEEEEecCC---CeEEEEEEECHHHcCCCHHHHHHH
Confidence 578888999999999998888877776444 4566677999999999776543 357899999999999999999999
Q ss_pred HHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEE
Q psy17026 192 HILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVL 247 (435)
Q Consensus 192 ~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m 247 (435)
++++++...| +..+.+.+...|..+++||+++||+..+....++..+. .|.+.|
T Consensus 78 ~~~~~~~~~~-~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~~~~~~~~~~-~~~~~~ 131 (131)
T TIGR01575 78 ELIDEAKGRG-VNEIFLEVRVSNIAAQALYKKLGFNEIAIRRNYYPDPG-EDAIVM 131 (131)
T ss_pred HHHHHHHHcC-CCeEEEEEecccHHHHHHHHHcCCCccccccccccCCC-cccccC
Confidence 9999999998 99999999999999999999999999999888775432 455443
No 14
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.69 E-value=5.2e-16 Score=131.19 Aligned_cols=129 Identities=19% Similarity=0.206 Sum_probs=103.5
Q ss_pred CcEEEEcCCchhHHHHHHHhHhhCCCCCCHH----HHHHHHh-cCceEEEEEeCCEEEEEEEEEecCC---CCCeEEEEE
Q psy17026 272 PKIELGDVTPHNIKQLKRLNTVVFPVSYNEK----FYKDVLE-AGELAKLAYYNDIVIGAVCCRIDPN---NGRKLYIMT 343 (435)
Q Consensus 272 ~~~~ir~~~~~d~~~~~~l~~~~~~~~~~~~----~~~~~~~-~~~~~~v~~~~~~ivG~~~~~~~~~---~~~~~~i~~ 343 (435)
+.+.|++++++|++.+.++........+... .+...+. ....++++..++++||++.+..... ....++|..
T Consensus 2 ~~~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~ 81 (144)
T PRK10146 2 PACELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQE 81 (144)
T ss_pred CccEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccchhheehe
Confidence 3568999999999999999876665545432 2333333 3455678888999999998865432 112457889
Q ss_pred EEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 344 LGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 344 i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
++|+|++||+|+|+.|++.+++++++.+ +..+.+.+...|.+|++||+++||+..+.
T Consensus 82 l~v~p~~rg~GiG~~Ll~~~~~~a~~~~-~~~i~l~~~~~n~~a~~fY~~~Gf~~~~~ 138 (144)
T PRK10146 82 LVVMPQARGLNVGSKLLAWAEEEARQAG-AEMTELSTNVKRHDAHRFYLREGYEQSHF 138 (144)
T ss_pred eEECHHHcCCCHHHHHHHHHHHHHHHcC-CcEEEEecCCCchHHHHHHHHcCCchhhh
Confidence 9999999999999999999999999998 99999999999999999999999987753
No 15
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.69 E-value=2.3e-15 Score=129.78 Aligned_cols=145 Identities=21% Similarity=0.377 Sum_probs=111.6
Q ss_pred cEEEEcCCchhHHHHHHHhHhh--CC----C-CCCHHHHHHHHh--cCceEEEEEeCCEEEEEEEEEecCCC--CCeEEE
Q psy17026 273 KIELGDVTPHNIKQLKRLNTVV--FP----V-SYNEKFYKDVLE--AGELAKLAYYNDIVIGAVCCRIDPNN--GRKLYI 341 (435)
Q Consensus 273 ~~~ir~~~~~d~~~~~~l~~~~--~~----~-~~~~~~~~~~~~--~~~~~~v~~~~~~ivG~~~~~~~~~~--~~~~~i 341 (435)
.+.+|+++.+|++.+.++..+. +. . ....+.+...+. .+..++++..+|++||++.+...... ...+.
T Consensus 3 ~i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~- 81 (162)
T PRK10140 3 EIVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVAD- 81 (162)
T ss_pred ccEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEecccccccceEEE-
Confidence 4789999999999999998642 11 1 122334444433 23356777789999999988754321 12233
Q ss_pred EEEEECCCcccCChHHHHHHHHHHHHHH-cCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeeccc-ccccccceeeeee
Q psy17026 342 MTLGCLSPYRRLGIGSMMLEHILNYVEK-DGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYY-KRIEPADAYVLQK 419 (435)
Q Consensus 342 ~~i~V~p~~rgkGlg~~Ll~~~~~~~~~-~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y-~~~~~~~~~~m~~ 419 (435)
..++|+|+|||+|+|+.|++.+++++++ .+ +..+.+.+...|.+|++||+|+||+.++..+.++ .++...|.+.|.+
T Consensus 82 ~~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~-~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~~~~~~~~d~~~~~~ 160 (162)
T PRK10140 82 FGICVDSRWKNRGVASALMREMIEMCDNWLR-VDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMAR 160 (162)
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHhhCC-ccEEEEEEEcCCHHHHHHHHHCCCEEEeecccceeeCCeEEEEEEEEe
Confidence 3699999999999999999999999998 46 8999999999999999999999999999988774 5556778888876
No 16
>KOG3235|consensus
Probab=99.68 E-value=6.1e-17 Score=130.60 Aligned_cols=148 Identities=24% Similarity=0.450 Sum_probs=130.1
Q ss_pred eEEeeCCcccHHHHHHHhHhcCCccccHHHH-HHHHhcCCeEEEEE-ECCeEEEEEEEEeecCCC---CeEEEEEEEeCC
Q psy17026 104 IELGDVTPHNIKQLKRLNTVVFPVSYNEKFY-KDVLEAGELAKLAY-YNDIVIGAVCCRIDPNNG---RKLYIMTLGCLS 178 (435)
Q Consensus 104 i~ir~~~~~d~~~l~~l~~~~~~~~~~~~~~-~~~l~~~~~~~v~~-~~g~iVG~~~~~~~~~~~---~~~~i~~l~V~p 178 (435)
+.||.++++|+-.+.++.-.+.|+.|.-.++ ...+.++...+|+. .+|+|||++.+....+.. +.++|.+++|..
T Consensus 2 m~iR~ar~~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~r 81 (193)
T KOG3235|consen 2 MNIRRARPDDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKR 81 (193)
T ss_pred cccccCCHHHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehh
Confidence 5689999999999999999999998886644 55667888999998 589999999988776322 578999999999
Q ss_pred CccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHH-hCCCEEEEEeecccccCCCCceEEEEeeccc
Q psy17026 179 PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYK-KFGFEIVETKQHYYKRIEPADAYVLQKTLRN 253 (435)
Q Consensus 179 ~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~-k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~ 253 (435)
.||+.|||++|+..+.....+.-...-+.|+|..+|.+|+.+|+ .+||++.+..+.||. .++|++.|.+.|+.
T Consensus 82 s~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve~kYYa--dGedAyaM~~~L~~ 155 (193)
T KOG3235|consen 82 SYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCEVEPKYYA--DGEDAYAMRKDLSV 155 (193)
T ss_pred hHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhccceEEeeccccccc--ccHHHHHHHHHHHH
Confidence 99999999999999888877765689999999999999999999 899999999999998 46789999988874
No 17
>KOG3216|consensus
Probab=99.68 E-value=1.8e-15 Score=121.94 Aligned_cols=129 Identities=22% Similarity=0.247 Sum_probs=103.2
Q ss_pred CceEEeeCCcccHHHHHHHhHhc--C-----CccccHHHHHH--HHhcCC-eEEEEEE---CCeEEEEEEEEeecCCC--
Q psy17026 102 PKIELGDVTPHNIKQLKRLNTVV--F-----PVSYNEKFYKD--VLEAGE-LAKLAYY---NDIVIGAVCCRIDPNNG-- 166 (435)
Q Consensus 102 ~~i~ir~~~~~d~~~l~~l~~~~--~-----~~~~~~~~~~~--~l~~~~-~~~v~~~---~g~iVG~~~~~~~~~~~-- 166 (435)
+.+.||.++|+|.+.+.+|..+. | +..-++..+.. ..+++. +.+++.. ++.++|++.+..+...-
T Consensus 2 ~~~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~ 81 (163)
T KOG3216|consen 2 DNIRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLG 81 (163)
T ss_pred CceEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeecccccccc
Confidence 35789999999999999996553 1 22233444443 334333 3344433 88999999988776543
Q ss_pred -CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 167 -RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 167 -~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
...|+.+++|.|+|||+|+|+.|++.+-+.|.+.| +.++.+.|.+.|.+|+.||++.|++....
T Consensus 82 k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G-~~rv~w~vldwN~rAi~lY~k~gaq~l~~ 146 (163)
T KOG3216|consen 82 KQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLG-TPRVEWVVLDWNHRAILLYEKVGAQDLKE 146 (163)
T ss_pred cceEEEEeeEecchhcccChHHHHHHHHHHHHHHcC-CCcEEEEEeccchhHHHHHHHhCccccce
Confidence 67899999999999999999999999999999999 99999999999999999999999996654
No 18
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.67 E-value=2.8e-15 Score=126.70 Aligned_cols=149 Identities=16% Similarity=0.134 Sum_probs=124.0
Q ss_pred eEEeeCCcccHHHHHHHhHhcCCc--------cccHHHHHHHHh----cCCeEEEEEEC-CeEEEEEEEEeecCCC--Ce
Q psy17026 104 IELGDVTPHNIKQLKRLNTVVFPV--------SYNEKFYKDVLE----AGELAKLAYYN-DIVIGAVCCRIDPNNG--RK 168 (435)
Q Consensus 104 i~ir~~~~~d~~~l~~l~~~~~~~--------~~~~~~~~~~l~----~~~~~~v~~~~-g~iVG~~~~~~~~~~~--~~ 168 (435)
+.||+.+..|++.+..+.+..... |-+.+....++. .+...+|+..+ |+++|++++....... +.
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~ 81 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRH 81 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccce
Confidence 678999999999999997776532 223333333333 34467778765 9999999998777655 55
Q ss_pred EEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecc-cccCCCCceEEE
Q psy17026 169 LYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHY-YKRIEPADAYVL 247 (435)
Q Consensus 169 ~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~-~~~~~~~d~~~m 247 (435)
....+++|+|++||+|+|++|+++++..+...| +..+...+..+|.+++++.+++||+..|..+.. ++.+.+.|.++|
T Consensus 82 tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g-~~~lva~I~~~n~aSi~lh~~~GF~~~G~~~~vg~k~g~wld~~~~ 160 (169)
T COG1247 82 TVELSIYLDPAARGKGLGKKLLQALITEARALG-VRELVAGIESDNLASIALHEKLGFEEVGTFPEVGDKFGRWLDLVLM 160 (169)
T ss_pred EEEEEEEECcccccccHHHHHHHHHHHHHHhCC-eEEEEEEEcCCCcHhHHHHHHCCCEEeccccccccccceEEeeeee
Confidence 667899999999999999999999999999999 999999999999999999999999999998887 677888999999
Q ss_pred Eeeccc
Q psy17026 248 QKTLRN 253 (435)
Q Consensus 248 ~~~l~~ 253 (435)
++.+..
T Consensus 161 ~~~l~~ 166 (169)
T COG1247 161 QLLLEE 166 (169)
T ss_pred ehhhcc
Confidence 988764
No 19
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.66 E-value=8.8e-15 Score=128.54 Aligned_cols=153 Identities=15% Similarity=0.210 Sum_probs=116.7
Q ss_pred CCCcEEEEcCCchhHHHHHHHhH--hhC-------CCC-CCHH----HHHHHH---hcC-ceEEEEEeCCEEEEEEEEEe
Q psy17026 270 TRPKIELGDVTPHNIKQLKRLNT--VVF-------PVS-YNEK----FYKDVL---EAG-ELAKLAYYNDIVIGAVCCRI 331 (435)
Q Consensus 270 ~~~~~~ir~~~~~d~~~~~~l~~--~~~-------~~~-~~~~----~~~~~~---~~~-~~~~v~~~~~~ivG~~~~~~ 331 (435)
..+++.||+++++|++.+..+.. ... +.. .+.+ ++.... ..+ ...+++..+|++||++.+..
T Consensus 7 ~t~rl~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~ 86 (179)
T PRK10151 7 VSESLELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNR 86 (179)
T ss_pred eCCcEEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEe
Confidence 34568899999999999998863 211 111 1222 222221 112 23567777999999998766
Q ss_pred cCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecc-ccccc
Q psy17026 332 DPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHY-YKRIE 410 (435)
Q Consensus 332 ~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~-y~~~~ 410 (435)
.......+.+ ++.|+|+|||+|+|++++..+++++++..+++++.+.+...|.+|+++++|+||+.+++.+.. +.++.
T Consensus 87 ~~~~~~~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~g~~~~~~~~~g~ 165 (179)
T PRK10151 87 IEPLNKTAYI-GYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRNGFTLEGCLKQAEYLNGA 165 (179)
T ss_pred eccCCCceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHCCCEEEeEeccceEECCE
Confidence 5433344555 678999999999999999999999998655999999999999999999999999999998776 66677
Q ss_pred ccceeeeeecccC
Q psy17026 411 PADAYVLQKTLRN 423 (435)
Q Consensus 411 ~~~~~~m~~~l~~ 423 (435)
+.|.+.|.+.+.+
T Consensus 166 ~~D~~~~~~~~~~ 178 (179)
T PRK10151 166 YDDVNLYARIIDS 178 (179)
T ss_pred EEEEEEEEEeecC
Confidence 8999999998764
No 20
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.65 E-value=1.5e-15 Score=133.05 Aligned_cols=148 Identities=25% Similarity=0.461 Sum_probs=118.9
Q ss_pred CCCcEEEEcCCchhHH--HHHHHhHhhCC--CCCCHHHHHHHHhcCce-EEEEEe---CC----EEEEEEEEEecCCCC-
Q psy17026 270 TRPKIELGDVTPHNIK--QLKRLNTVVFP--VSYNEKFYKDVLEAGEL-AKLAYY---ND----IVIGAVCCRIDPNNG- 336 (435)
Q Consensus 270 ~~~~~~ir~~~~~d~~--~~~~l~~~~~~--~~~~~~~~~~~~~~~~~-~~v~~~---~~----~ivG~~~~~~~~~~~- 336 (435)
......++.+...|+. .+..+....|. .+|+...+...+..... ++++.. ++ .++||+.+.......
T Consensus 8 ~~~~~~ir~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 87 (177)
T COG0456 8 SEDKVTIREAINKDLLDVALAALEARTFDIRLPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGRPS 87 (177)
T ss_pred hccceehhhhhhcccchHHHHHHhhhcCCCCCcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCCcc
Confidence 3445678889999988 88888888888 68998888877775444 444444 23 599999886444321
Q ss_pred --CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCc-cEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccccccccc
Q psy17026 337 --RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNF-DSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPAD 413 (435)
Q Consensus 337 --~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~-~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~ 413 (435)
..++|..++|+|+|||+|+|++|+..+++.+.+.+ . ..+.+.|..+|.+|++||+++||+..+...+||.++.. +
T Consensus 88 ~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~-~~~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~~~yy~~~~~-~ 165 (177)
T COG0456 88 ADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERG-LADKIVLEVRESNEAAIGLYRKLGFEVVKIRKNYYADGNG-D 165 (177)
T ss_pred ccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcC-CCceEEEEEecCChHHHHHHHHcCCEEEeeehhhccCCcc-h
Confidence 25799999999999999999999999999999998 6 89999999999999999999999999999999986332 3
Q ss_pred eeeeee
Q psy17026 414 AYVLQK 419 (435)
Q Consensus 414 ~~~m~~ 419 (435)
.+.|.+
T Consensus 166 a~~~~~ 171 (177)
T COG0456 166 ALLMLK 171 (177)
T ss_pred hHHHHH
Confidence 444443
No 21
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.65 E-value=3.3e-15 Score=130.86 Aligned_cols=138 Identities=25% Similarity=0.472 Sum_probs=116.1
Q ss_pred CCceEEeeCCcccHH--HHHHHhHhcCC--ccccHHHHHHHHhcCC-eEEEEEEC---C----eEEEEEEEEeecCCC--
Q psy17026 101 RPKIELGDVTPHNIK--QLKRLNTVVFP--VSYNEKFYKDVLEAGE-LAKLAYYN---D----IVIGAVCCRIDPNNG-- 166 (435)
Q Consensus 101 ~~~i~ir~~~~~d~~--~l~~l~~~~~~--~~~~~~~~~~~l~~~~-~~~v~~~~---g----~iVG~~~~~~~~~~~-- 166 (435)
..++.+++++..|+. .+..+....|. .+|+...+...+.... ..+++..+ + +++|++.........
T Consensus 9 ~~~~~ir~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 88 (177)
T COG0456 9 EDKVTIREAINKDLLDVALAALEARTFDIRLPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGRPSA 88 (177)
T ss_pred ccceehhhhhhcccchHHHHHHhhhcCCCCCcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCCccc
Confidence 456788999999999 88888888887 6899888888777554 45555553 3 599999986443321
Q ss_pred -CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCc-cEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccC
Q psy17026 167 -RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNF-DSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRI 239 (435)
Q Consensus 167 -~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~-~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~ 239 (435)
..++|..++|+|+|||+|||++|++++++.+.+.+ . ..+.|.|..+|..|++||+++||+..++..+||.++
T Consensus 89 ~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~-~~~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~~~yy~~~ 162 (177)
T COG0456 89 DHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERG-LADKIVLEVRESNEAAIGLYRKLGFEVVKIRKNYYADG 162 (177)
T ss_pred cCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcC-CCceEEEEEecCChHHHHHHHHcCCEEEeeehhhccCC
Confidence 15799999999999999999999999999999998 6 899999999999999999999999999999998743
No 22
>PRK03624 putative acetyltransferase; Provisional
Probab=99.65 E-value=3.9e-15 Score=124.76 Aligned_cols=125 Identities=20% Similarity=0.290 Sum_probs=100.9
Q ss_pred ceEEeeCCcccHHHHHHHhHhcC-CccccHH--HHHHHHh-cCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCC
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVVF-PVSYNEK--FYKDVLE-AGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLS 178 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~~-~~~~~~~--~~~~~l~-~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p 178 (435)
++.||+++++|++.+.++..... ..+|... .+...+. ....++++..++++||++.+..... ..++..++|+|
T Consensus 2 ~~~ir~~~~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~---~~~i~~i~v~p 78 (140)
T PRK03624 2 AMEIRVFRQADFEAVIALWERCDLTRPWNDPEMDIERKLNHDPSLFLVAEVGGEVVGTVMGGYDGH---RGWAYYLAVHP 78 (140)
T ss_pred ceEEEEcccccHHHHHHHHHhcCCCcchhhHHHHHHHHhcCCCceEEEEEcCCcEEEEEEeeccCC---CceEEEEEECH
Confidence 47899999999999999977752 2334322 2233333 3346778888999999998764332 35788999999
Q ss_pred CccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 179 PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 179 ~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
+|||+|+|+.|++.+++.+++.| +..+.+.+...|..+++||+|+||+..+.
T Consensus 79 ~~rg~Gig~~ll~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~y~k~GF~~~~~ 130 (140)
T PRK03624 79 DFRGRGIGRALVARLEKKLIARG-CPKINLQVREDNDAVLGFYEALGYEEQDR 130 (140)
T ss_pred HHhCCCHHHHHHHHHHHHHHHCC-CCEEEEEEecCcHHHHHHHHHcCCccccE
Confidence 99999999999999999999998 99999999999999999999999997654
No 23
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.65 E-value=7.3e-15 Score=124.16 Aligned_cols=150 Identities=16% Similarity=0.133 Sum_probs=124.3
Q ss_pred EEEEcCCchhHHHHHHHhHhhCCCC--------CCHHHHHHHHh----cCceEEEEEeC-CEEEEEEEEEecCCCC--Ce
Q psy17026 274 IELGDVTPHNIKQLKRLNTVVFPVS--------YNEKFYKDVLE----AGELAKLAYYN-DIVIGAVCCRIDPNNG--RK 338 (435)
Q Consensus 274 ~~ir~~~~~d~~~~~~l~~~~~~~~--------~~~~~~~~~~~----~~~~~~v~~~~-~~ivG~~~~~~~~~~~--~~ 338 (435)
+.||+.+..|++.+.++++...... -+.+...++.. .+...+|+..+ |+++|++++......+ ..
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~ 81 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRH 81 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccce
Confidence 5789999999999999988765431 12233333332 34466777665 9999999998877665 44
Q ss_pred EEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecc-cccccccceeee
Q psy17026 339 LYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHY-YKRIEPADAYVL 417 (435)
Q Consensus 339 ~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~-y~~~~~~~~~~m 417 (435)
.....++|+|+.||+|+|++|++.++..+...| +..+...+..+|.+++++++++||+.+|+.+.. ++.+.+.|...|
T Consensus 82 tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g-~~~lva~I~~~n~aSi~lh~~~GF~~~G~~~~vg~k~g~wld~~~~ 160 (169)
T COG1247 82 TVELSIYLDPAARGKGLGKKLLQALITEARALG-VRELVAGIESDNLASIALHEKLGFEEVGTFPEVGDKFGRWLDLVLM 160 (169)
T ss_pred EEEEEEEECcccccccHHHHHHHHHHHHHHhCC-eEEEEEEEcCCCcHhHHHHHHCCCEEeccccccccccceEEeeeee
Confidence 556689999999999999999999999999999 999999999999999999999999999998888 888889999999
Q ss_pred eecccCC
Q psy17026 418 QKTLRNK 424 (435)
Q Consensus 418 ~~~l~~~ 424 (435)
.+.|...
T Consensus 161 ~~~l~~~ 167 (169)
T COG1247 161 QLLLEEG 167 (169)
T ss_pred ehhhccc
Confidence 9998643
No 24
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.64 E-value=1.6e-14 Score=126.95 Aligned_cols=151 Identities=15% Similarity=0.212 Sum_probs=115.1
Q ss_pred CCceEEeeCCcccHHHHHHHhH--hc-------CCcc-ccHHHHHHHHh-------cC-CeEEEEEECCeEEEEEEEEee
Q psy17026 101 RPKIELGDVTPHNIKQLKRLNT--VV-------FPVS-YNEKFYKDVLE-------AG-ELAKLAYYNDIVIGAVCCRID 162 (435)
Q Consensus 101 ~~~i~ir~~~~~d~~~l~~l~~--~~-------~~~~-~~~~~~~~~l~-------~~-~~~~v~~~~g~iVG~~~~~~~ 162 (435)
.+.+.||+++++|++.+..+.. .. ++.+ .+.+.....+. .+ ...+++..+|++||++.+...
T Consensus 8 t~rl~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~~ 87 (179)
T PRK10151 8 SESLELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNRI 87 (179)
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEee
Confidence 4568899999999999999862 21 1211 23232222222 12 235777789999999998765
Q ss_pred cCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecc-cccCCC
Q psy17026 163 PNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHY-YKRIEP 241 (435)
Q Consensus 163 ~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~-~~~~~~ 241 (435)
......+.+ .+.++|+|||+|+|+.+++.+++++++..++.++.+.+...|.+|+++++|+||+.+|+.+.. +.+|..
T Consensus 88 ~~~~~~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~g~~~~~~~~~g~~ 166 (179)
T PRK10151 88 EPLNKTAYI-GYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRNGFTLEGCLKQAEYLNGAY 166 (179)
T ss_pred ccCCCceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHCCCEEEeEeccceEECCEE
Confidence 443344555 467999999999999999999999997655999999999999999999999999999999877 446677
Q ss_pred CceEEEEeecc
Q psy17026 242 ADAYVLQKTLR 252 (435)
Q Consensus 242 ~d~~~m~~~l~ 252 (435)
.|...|.+.+.
T Consensus 167 ~D~~~~~~~~~ 177 (179)
T PRK10151 167 DDVNLYARIID 177 (179)
T ss_pred EEEEEEEEeec
Confidence 88888887664
No 25
>PTZ00330 acetyltransferase; Provisional
Probab=99.63 E-value=9.3e-15 Score=123.91 Aligned_cols=125 Identities=17% Similarity=0.295 Sum_probs=96.2
Q ss_pred ceEEeeCCcccHHHHHHHhHhcCCcc-ccHHHHHHHHhc----C--CeEEEEEECCeEEEEEEEEeecCC----CCeEEE
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVVFPVS-YNEKFYKDVLEA----G--ELAKLAYYNDIVIGAVCCRIDPNN----GRKLYI 171 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~~~~~-~~~~~~~~~l~~----~--~~~~v~~~~g~iVG~~~~~~~~~~----~~~~~i 171 (435)
.+.||+++++|++.+.++.......+ ++.+........ + ...+++..+|++||++.+...... ...+++
T Consensus 6 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~i 85 (147)
T PTZ00330 6 SLELRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGKCVGHI 85 (147)
T ss_pred eEEEEEcccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEeccccccCCCceEEE
Confidence 57899999999999999977665433 444433333321 1 234555678999999998754321 124689
Q ss_pred EEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 172 MTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 172 ~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
..++|+|+|||+|+|+.|++++++++++.| +..+.+.+ |.+|++||+|+||+....
T Consensus 86 ~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~-~~~l~l~~---n~~a~~~y~k~GF~~~~~ 141 (147)
T PTZ00330 86 EDVVVDPSYRGQGLGRALISDLCEIARSSG-CYKVILDC---TEDMVAFYKKLGFRACER 141 (147)
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEec---ChHHHHHHHHCCCEEece
Confidence 999999999999999999999999999998 88887664 779999999999997653
No 26
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.63 E-value=1.1e-14 Score=129.21 Aligned_cols=166 Identities=20% Similarity=0.279 Sum_probs=120.9
Q ss_pred EEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeeccccCCCCCCCCCCccccCCCCcEEEEcCCchhHHHHHH
Q psy17026 210 VQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRNKVPNGEEHKDGNVFTMTRPKIELGDVTPHNIKQLKR 289 (435)
Q Consensus 210 v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~d~~~~~~ 289 (435)
...+|..-.......||..... .+.|..++....+ ....+.||+++++|++.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~-------------~~~~~~lR~~~~~D~~~l~~ 59 (191)
T TIGR02382 5 IAASNLGLLDALQQLGFSLVEG------------EVDLSLPVNNTEN-------------ATSDPGARVATETDIPALRQ 59 (191)
T ss_pred cchHHHHHHHHHHHhhhhhhhe------------eEEEEEEcCCCCC-------------CCCCCcceeCChhhHHHHHH
Confidence 4556777788899999986542 2335554443110 12235799999999999999
Q ss_pred HhHhhCC-----CCCCH-----HHHHHHH----hc--CceEE-EEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCccc
Q psy17026 290 LNTVVFP-----VSYNE-----KFYKDVL----EA--GELAK-LAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRR 352 (435)
Q Consensus 290 l~~~~~~-----~~~~~-----~~~~~~~----~~--~~~~~-v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rg 352 (435)
+....+. .+|.. ..+...+ .. ....+ ++..+|++||++.+..... ...++..++|+|++||
T Consensus 60 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~~--~~~~i~~l~V~p~~rG 137 (191)
T TIGR02382 60 LASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELND--TDARIGLLAVFPGAQS 137 (191)
T ss_pred HHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecCC--CceEEEEEEECHHHcC
Confidence 9877653 23321 1122221 11 12233 3345889999998875543 3367888999999999
Q ss_pred CChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEee
Q psy17026 353 LGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQ 403 (435)
Q Consensus 353 kGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~ 403 (435)
+|+|++|++.+++++++.| +.++.+.|...|.+|++||+|+||+.+++..
T Consensus 138 kG~G~~ll~~~~~~a~~~g-~~~I~l~v~~~N~~A~~~Y~klGF~~~~~~~ 187 (191)
T TIGR02382 138 RGIGAELMQTALNWCYARG-LTRLRVATQMGNTAALRLYIRSGANIESTAY 187 (191)
T ss_pred CCHHHHHHHHHHHHHHHcC-CCEEEEEeCCCCHHHHHHHHHcCCcccccee
Confidence 9999999999999999988 9999999999999999999999999988743
No 27
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.63 E-value=4.3e-15 Score=127.37 Aligned_cols=124 Identities=14% Similarity=0.152 Sum_probs=97.4
Q ss_pred EeeCCcccHHHHHHHhHhcCCccccHH-HHHHHHh-cCCeEEEEE-ECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccC
Q psy17026 106 LGDVTPHNIKQLKRLNTVVFPVSYNEK-FYKDVLE-AGELAKLAY-YNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRR 182 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~~~~~~~~~-~~~~~l~-~~~~~~v~~-~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg 182 (435)
||+++++|++++.+|...+...+.... .+..... .....+++. .+|++||++.+..........++..++|+|++||
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg 80 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFADTSIVAESEGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARG 80 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccceehhhhhhhcCCcEEEEEcCCCeEEEEEEEEecCCCCCeEEEEEEEEChHhcc
Confidence 588999999999999988754332211 1111111 233456666 4789999987765544445678899999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 183 LGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 183 ~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
+|+|++|+++++++++..+ +..+.+.|..+|.+|++||+|+||+...
T Consensus 81 ~GiG~~L~~~l~~~a~~~~-~~~i~~~v~~~N~~a~~ly~k~G~~~~~ 127 (157)
T TIGR02406 81 KGLARRLLEALLERVACER-VRHLETTITPDNQASRALFKALARRRGV 127 (157)
T ss_pred CcHHHHHHHHHHHHHHhCC-CCEEEEEEcCCCHHHHHHHHHhCcccCC
Confidence 9999999999999999998 9999999999999999999999998644
No 28
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.63 E-value=6.5e-15 Score=130.69 Aligned_cols=128 Identities=20% Similarity=0.272 Sum_probs=100.1
Q ss_pred ceEEeeCCcccHHHHHHHhHhcCC-----cccc-H----HHHHHHH----hcC--CeEE-EEEECCeEEEEEEEEeecCC
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVVFP-----VSYN-E----KFYKDVL----EAG--ELAK-LAYYNDIVIGAVCCRIDPNN 165 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~~~-----~~~~-~----~~~~~~l----~~~--~~~~-v~~~~g~iVG~~~~~~~~~~ 165 (435)
++.||+++++|++.+.++....+. .+|. + .++...+ ... ...+ ++..+|++||++.+.....
T Consensus 43 ~~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~~- 121 (191)
T TIGR02382 43 DPGARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELND- 121 (191)
T ss_pred CCcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecCC-
Confidence 457899999999999999877653 2332 1 1222222 112 2233 4455889999999875543
Q ss_pred CCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEee
Q psy17026 166 GRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQ 233 (435)
Q Consensus 166 ~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~ 233 (435)
..+++..++|+|++||+|+|++|++++++++++.| +.++.+.|..+|.+|++||+|+||+.++...
T Consensus 122 -~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g-~~~I~l~v~~~N~~A~~~Y~klGF~~~~~~~ 187 (191)
T TIGR02382 122 -TDARIGLLAVFPGAQSRGIGAELMQTALNWCYARG-LTRLRVATQMGNTAALRLYIRSGANIESTAY 187 (191)
T ss_pred -CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcC-CCEEEEEeCCCCHHHHHHHHHcCCcccccee
Confidence 24688999999999999999999999999999998 9999999999999999999999999887644
No 29
>KOG3235|consensus
Probab=99.62 E-value=1.3e-15 Score=122.96 Aligned_cols=148 Identities=24% Similarity=0.433 Sum_probs=126.9
Q ss_pred EEEEcCCchhHHHHHHHhHhhCCCCCCHH-HHHHHHhcCceEEEEE-eCCEEEEEEEEEecCC---CCCeEEEEEEEECC
Q psy17026 274 IELGDVTPHNIKQLKRLNTVVFPVSYNEK-FYKDVLEAGELAKLAY-YNDIVIGAVCCRIDPN---NGRKLYIMTLGCLS 348 (435)
Q Consensus 274 ~~ir~~~~~d~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~v~~-~~~~ivG~~~~~~~~~---~~~~~~i~~i~V~p 348 (435)
+.||.++++|+-.+..+.-.+.++.+.-. ++...+..+...||+. .+|++|||+......+ .+..+.|..++|..
T Consensus 2 m~iR~ar~~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~r 81 (193)
T KOG3235|consen 2 MNIRRARPDDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKR 81 (193)
T ss_pred cccccCCHHHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehh
Confidence 45789999999888887777777777754 4455666888999998 5899999998876652 22689999999999
Q ss_pred CcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHH-hcCcEEEeEeecccccccccceeeeeecccC
Q psy17026 349 PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYK-KFGFEIVETKQHYYKRIEPADAYVLQKTLRN 423 (435)
Q Consensus 349 ~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~-k~GF~~~~~~~~~y~~~~~~~~~~m~~~l~~ 423 (435)
.||+.|||++|++.+...+.+.-+...+.|+|..+|.+|+.+|+ .+||++++....||. .+.|+|.|++.|..
T Consensus 82 s~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve~kYYa--dGedAyaM~~~L~~ 155 (193)
T KOG3235|consen 82 SYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCEVEPKYYA--DGEDAYAMRKDLSV 155 (193)
T ss_pred hHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhccceEEeeccccccc--ccHHHHHHHHHHHH
Confidence 99999999999999998888865689999999999999999999 999999999999999 47899999999854
No 30
>PRK03624 putative acetyltransferase; Provisional
Probab=99.62 E-value=1.9e-14 Score=120.51 Aligned_cols=125 Identities=20% Similarity=0.288 Sum_probs=100.3
Q ss_pred cEEEEcCCchhHHHHHHHhHhhC-CCCCCHH--HHHHHHh-cCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECC
Q psy17026 273 KIELGDVTPHNIKQLKRLNTVVF-PVSYNEK--FYKDVLE-AGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLS 348 (435)
Q Consensus 273 ~~~ir~~~~~d~~~~~~l~~~~~-~~~~~~~--~~~~~~~-~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p 348 (435)
.+.+|+++++|++.+.++..... ..+|... .+...+. ....++++..++++||++.+.... ...++..++|+|
T Consensus 2 ~~~ir~~~~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~---~~~~i~~i~v~p 78 (140)
T PRK03624 2 AMEIRVFRQADFEAVIALWERCDLTRPWNDPEMDIERKLNHDPSLFLVAEVGGEVVGTVMGGYDG---HRGWAYYLAVHP 78 (140)
T ss_pred ceEEEEcccccHHHHHHHHHhcCCCcchhhHHHHHHHHhcCCCceEEEEEcCCcEEEEEEeeccC---CCceEEEEEECH
Confidence 46799999999999999987652 2234322 2233333 335567788899999998776443 235788899999
Q ss_pred CcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 349 PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 349 ~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
+|||+|+|+.|+..+++++++.+ +..+.+.+...|..++++|+|+||+..+.
T Consensus 79 ~~rg~Gig~~ll~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~y~k~GF~~~~~ 130 (140)
T PRK03624 79 DFRGRGIGRALVARLEKKLIARG-CPKINLQVREDNDAVLGFYEALGYEEQDR 130 (140)
T ss_pred HHhCCCHHHHHHHHHHHHHHHCC-CCEEEEEEecCcHHHHHHHHHcCCccccE
Confidence 99999999999999999999988 99999999999999999999999998775
No 31
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.62 E-value=3.1e-14 Score=121.88 Aligned_cols=130 Identities=25% Similarity=0.373 Sum_probs=98.8
Q ss_pred EeeCCcccHHHHHHHhHhc-----CCcc---ccHHHHHHHHh-----cCCeEEEEEE-CCeEEEEEEEEeecCCCCeEEE
Q psy17026 106 LGDVTPHNIKQLKRLNTVV-----FPVS---YNEKFYKDVLE-----AGELAKLAYY-NDIVIGAVCCRIDPNNGRKLYI 171 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~-----~~~~---~~~~~~~~~l~-----~~~~~~v~~~-~g~iVG~~~~~~~~~~~~~~~i 171 (435)
||+++++|++.+..+.... +... .+...+..++. .....+++.. +|++||++.+.........+.+
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~~~~~~~~ 80 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDPYNHTAEL 80 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSSGTTEEEE
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeeccCCEEEE
Confidence 6999999999999997542 2111 22333333332 3456666666 9999999999876654444544
Q ss_pred EEEEeCCCccCCCHHHHHHHHHHHHH-HhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccc
Q psy17026 172 MTLGCLSPYRRLGIGSMMLEHILNYV-EKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYK 237 (435)
Q Consensus 172 ~~l~V~p~~rg~GiG~~Ll~~~~~~a-~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~ 237 (435)
.++|.|++|++|+|+.|+..++++| .+.| +.++.+.|...|..|++||+++||+..++.+.++.
T Consensus 81 -~~~v~~~~~~~gig~~l~~~l~~~af~~~~-~~~i~~~v~~~N~~~i~~~~~~GF~~~g~~~~~~~ 145 (155)
T PF13420_consen 81 -SIYVSPDYRGKGIGRKLLDELIEYAFKELG-IHKIYLEVFSSNEKAINFYKKLGFEEEGELKDHIF 145 (155)
T ss_dssp -EEEEEGGGTTSSHHHHHHHHHHHHH-HHTT--CEEEEEEETT-HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -eeEEChhHCCCcHHHHHHHHHHHHhhhccC-eEEEEEEEecCCHHHHHHHHhCCCEEEEEEecEEE
Confidence 4888899999999999999999999 7787 99999999999999999999999999999988853
No 32
>KOG3234|consensus
Probab=99.61 E-value=4.2e-15 Score=120.21 Aligned_cols=159 Identities=23% Similarity=0.356 Sum_probs=130.2
Q ss_pred EEEcCCchhHHHHHHHhHhhCCCCCCHHHHHHHHh-cCceEEEEEe-CCEEEEEEEEEecCCCC-CeEEEEEEEECCCcc
Q psy17026 275 ELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLE-AGELAKLAYY-NDIVIGAVCCRIDPNNG-RKLYIMTLGCLSPYR 351 (435)
Q Consensus 275 ~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~-~~~ivG~~~~~~~~~~~-~~~~i~~i~V~p~~r 351 (435)
++|+++.+|+..+..+.-+...+.++-.++-..+. .+..+.++.. ++++-||+.-...+... .++++..+.|.|+||
T Consensus 3 t~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~R 82 (173)
T KOG3234|consen 3 TIRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYR 82 (173)
T ss_pred ccccccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeeccccCcceeeEEEEEEechhHH
Confidence 57888888888877776555555565554444333 5666677665 67899998876665444 789999999999999
Q ss_pred cCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccccccccceeeeeecccCCCCCCCCC
Q psy17026 352 RLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRNKVPNGEEH 431 (435)
Q Consensus 352 gkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~~~~m~~~l~~~~~~~~~~ 431 (435)
+.|+|+.||..+.+.....+ .--+.+.|..+|..|+.+|+++||.+-.+..+||..|...|.+.|+|.|+++.+--+..
T Consensus 83 rl~la~~lm~~led~~d~~~-a~fvDLfVr~sN~iAI~mYkkLGY~~YR~Vi~YY~~g~deda~dMRKalSrD~dkksi~ 161 (173)
T KOG3234|consen 83 RLGLAAKLMDTLEDVSDVDN-AYFVDLFVRVSNQIAIDMYKKLGYSVYRTVIEYYSVGPDEDAYDMRKALSRDVDKKSII 161 (173)
T ss_pred HHHHHHHHHHHHHHHHHhhh-hheeeeeeeccchhHHHHHHhcCceEEEeeeeeeccCCCcchHhhhhhhccCcccceee
Confidence 99999999999999998886 78899999999999999999999999999999999877899999999999886555666
Q ss_pred CCC
Q psy17026 432 KDG 434 (435)
Q Consensus 432 ~~~ 434 (435)
+.|
T Consensus 162 ~~~ 164 (173)
T KOG3234|consen 162 PLG 164 (173)
T ss_pred cCC
Confidence 655
No 33
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.61 E-value=6.1e-14 Score=124.84 Aligned_cols=153 Identities=12% Similarity=0.130 Sum_probs=112.6
Q ss_pred CCCCcEEEEcCCchhHHHHHHHhHh--hCCCCCC---------HH-------HHHHHHhcC-ceEEEEEe--CCEEEEEE
Q psy17026 269 MTRPKIELGDVTPHNIKQLKRLNTV--VFPVSYN---------EK-------FYKDVLEAG-ELAKLAYY--NDIVIGAV 327 (435)
Q Consensus 269 ~~~~~~~ir~~~~~d~~~~~~l~~~--~~~~~~~---------~~-------~~~~~~~~~-~~~~v~~~--~~~ivG~~ 327 (435)
+..+++.||+++++|++.+.++..+ .+..+|. .. .+......+ ...+++.. ++++||.+
T Consensus 13 l~t~rl~LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i 92 (194)
T PRK10809 13 LTTDRLVVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVA 92 (194)
T ss_pred eccCcEEEEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEE
Confidence 4566789999999999999998764 2222222 11 112222223 23455443 67999999
Q ss_pred EEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeeccc-
Q psy17026 328 CCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYY- 406 (435)
Q Consensus 328 ~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y- 406 (435)
.+.............++.|.|+|||+|+|+.++..+++++++..+++++.+.|...|.+|+++|+|+||+.++..++++
T Consensus 93 ~l~~~~~~~~~~~eig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~~~g~~~~~~~ 172 (194)
T PRK10809 93 NFSNVVRGSFHACYLGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLL 172 (194)
T ss_pred EEEeecCCCeeeEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCcEEeeeccccc
Confidence 8865543222223347899999999999999999999999986339999999999999999999999999999988774
Q ss_pred ccccccceeeeeecc
Q psy17026 407 KRIEPADAYVLQKTL 421 (435)
Q Consensus 407 ~~~~~~~~~~m~~~l 421 (435)
.++...|.+.|.+..
T Consensus 173 ~~g~~~d~~~~~~~~ 187 (194)
T PRK10809 173 IDGQWRDHVLTALTT 187 (194)
T ss_pred cCCeEEEEEEeeeeh
Confidence 455578888887754
No 34
>KOG3138|consensus
Probab=99.60 E-value=5e-15 Score=126.69 Aligned_cols=157 Identities=46% Similarity=0.783 Sum_probs=137.0
Q ss_pred cEEEEcCCchhHHHHHHHhHhhCCCCCCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCC--------eEEEEEE
Q psy17026 273 KIELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGR--------KLYIMTL 344 (435)
Q Consensus 273 ~~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~--------~~~i~~i 344 (435)
.+.++..++.++..+..+...+||..+...++...+......-++..++..+|..++.......+ .++|..+
T Consensus 16 ~~~l~~it~~nl~~~~~l~~~~fP~~y~~kfy~~~~~~~~~~~~A~~~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~~L 95 (187)
T KOG3138|consen 16 LIELRLITPNNLKQLKQLNEDIFPISYVDKFYPDVLSNGDLTQLAYYNEIAVGAVACKLIKFVQNAKRLFGNRVIYILSL 95 (187)
T ss_pred ceeeccCCcchHHHHHHHhccccCcchHHHHHHHHHhcCCHHHhhhhccccccceeeeehhhhhhhhhhhccceeEEEee
Confidence 37899999999999999999999999999999999988777777777777888777776554431 3899999
Q ss_pred EECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccccccccceeeeeecccCC
Q psy17026 345 GCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRNK 424 (435)
Q Consensus 345 ~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~~~~m~~~l~~~ 424 (435)
+|++.||.+|||+.||..+++++.....+..+++++...|..++.||++.||+.+.....||......+...|.+.+-.+
T Consensus 96 gvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~~~y~~~~~~~~~~l~~~~~~~ 175 (187)
T KOG3138|consen 96 GVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLKNYYSILGPPDDSFLRKLLIHG 175 (187)
T ss_pred cccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeeccccccccccCcchhhhhhheecC
Confidence 99999999999999999999999887668889999999999999999999999999999999988888888888888766
Q ss_pred CCCCC
Q psy17026 425 VPNGE 429 (435)
Q Consensus 425 ~~~~~ 429 (435)
.-+++
T Consensus 176 ~~~~~ 180 (187)
T KOG3138|consen 176 SGSPP 180 (187)
T ss_pred CCCCC
Confidence 43333
No 35
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.60 E-value=1.7e-14 Score=123.62 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=97.5
Q ss_pred EEcCCchhHHHHHHHhHhhCCCCCCHH-HHHHHHh-cCceEEEEE-eCCEEEEEEEEEecCCCCCeEEEEEEEECCCccc
Q psy17026 276 LGDVTPHNIKQLKRLNTVVFPVSYNEK-FYKDVLE-AGELAKLAY-YNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRR 352 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~~~~~~~~-~~~~~~~-~~~~~~v~~-~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rg 352 (435)
||+++.+|++++.+|........+... .+..... ....++++. .++++||++.+..........++..++|+|++||
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg 80 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFADTSIVAESEGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARG 80 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccceehhhhhhhcCCcEEEEEcCCCeEEEEEEEEecCCCCCeEEEEEEEEChHhcc
Confidence 478899999999999988754332211 1111111 234456666 4679999987665554446678999999999999
Q ss_pred CChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 353 LGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 353 kGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
+|+|++|++.++++++..+ +..+.+.|...|.+|++||+|+||+....
T Consensus 81 ~GiG~~L~~~l~~~a~~~~-~~~i~~~v~~~N~~a~~ly~k~G~~~~~~ 128 (157)
T TIGR02406 81 KGLARRLLEALLERVACER-VRHLETTITPDNQASRALFKALARRRGVH 128 (157)
T ss_pred CcHHHHHHHHHHHHHHhCC-CCEEEEEEcCCCHHHHHHHHHhCcccCCC
Confidence 9999999999999999988 89999999999999999999999987554
No 36
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.60 E-value=5.7e-14 Score=120.22 Aligned_cols=137 Identities=23% Similarity=0.355 Sum_probs=101.7
Q ss_pred EEcCCchhHHHHHHHhHhh-----CCCC---CCHH----HHHHHH-hcCceEEEEEe-CCEEEEEEEEEecCCCCCeEEE
Q psy17026 276 LGDVTPHNIKQLKRLNTVV-----FPVS---YNEK----FYKDVL-EAGELAKLAYY-NDIVIGAVCCRIDPNNGRKLYI 341 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~-----~~~~---~~~~----~~~~~~-~~~~~~~v~~~-~~~ivG~~~~~~~~~~~~~~~i 341 (435)
||+++++|++.+..+.+.. +... .... ++.... ......+++.. +|++||++.+.........+.+
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~~~~~~~~ 80 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDPYNHTAEL 80 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSSGTTEEEE
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeeccCCEEEE
Confidence 6899999999999987542 1111 1222 333332 23566677776 9999999999876665455555
Q ss_pred EEEEECCCcccCChHHHHHHHHHHHH-HHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccc-cccccce
Q psy17026 342 MTLGCLSPYRRLGIGSMMLEHILNYV-EKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYK-RIEPADA 414 (435)
Q Consensus 342 ~~i~V~p~~rgkGlg~~Ll~~~~~~~-~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~-~~~~~~~ 414 (435)
.+.|.|++|++|+|+.|+..+++++ .+.| ++++.+.|...|.++++||+++||+.+++.++++. .+.+.|.
T Consensus 81 -~~~v~~~~~~~gig~~l~~~l~~~af~~~~-~~~i~~~v~~~N~~~i~~~~~~GF~~~g~~~~~~~~~~~y~D~ 153 (155)
T PF13420_consen 81 -SIYVSPDYRGKGIGRKLLDELIEYAFKELG-IHKIYLEVFSSNEKAINFYKKLGFEEEGELKDHIFINGKYYDV 153 (155)
T ss_dssp -EEEEEGGGTTSSHHHHHHHHHHHHH-HHTT--CEEEEEEETT-HHHHHHHHHTTEEEEEEEEEEEEETTEEEEE
T ss_pred -eeEEChhHCCCcHHHHHHHHHHHHhhhccC-eEEEEEEEecCCHHHHHHHHhCCCEEEEEEecEEEECCeEEEe
Confidence 4888899999999999999999999 6677 99999999999999999999999999999988843 3344444
No 37
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.60 E-value=9.4e-14 Score=123.66 Aligned_cols=153 Identities=12% Similarity=0.116 Sum_probs=111.6
Q ss_pred cCCCceEEeeCCcccHHHHHHHhHh--cCCcccc---------H-------HHHHHHHhcCC-eEEEEEE--CCeEEEEE
Q psy17026 99 YDRPKIELGDVTPHNIKQLKRLNTV--VFPVSYN---------E-------KFYKDVLEAGE-LAKLAYY--NDIVIGAV 157 (435)
Q Consensus 99 ~~~~~i~ir~~~~~d~~~l~~l~~~--~~~~~~~---------~-------~~~~~~l~~~~-~~~v~~~--~g~iVG~~ 157 (435)
+....+.||+++++|++.+.++... .+-.+|. . ..+......+. ..+++.. ++++||.+
T Consensus 13 l~t~rl~LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i 92 (194)
T PRK10809 13 LTTDRLVVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVA 92 (194)
T ss_pred eccCcEEEEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEE
Confidence 4456789999999999999998654 2211221 1 11122222333 3455543 67999999
Q ss_pred EEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeeccc-
Q psy17026 158 CCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYY- 236 (435)
Q Consensus 158 ~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~- 236 (435)
.+..............+.|.|+|||+|+|+.+++.+++++.+..++.++.+.|...|.+|+++|+|+||+..+....++
T Consensus 93 ~l~~~~~~~~~~~eig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~~~g~~~~~~~ 172 (194)
T PRK10809 93 NFSNVVRGSFHACYLGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLL 172 (194)
T ss_pred EEEeecCCCeeeEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCcEEeeeccccc
Confidence 9875543221223456789999999999999999999999986339999999999999999999999999999988775
Q ss_pred ccCCCCceEEEEeec
Q psy17026 237 KRIEPADAYVLQKTL 251 (435)
Q Consensus 237 ~~~~~~d~~~m~~~l 251 (435)
.+|...|.++|....
T Consensus 173 ~~g~~~d~~~~~~~~ 187 (194)
T PRK10809 173 IDGQWRDHVLTALTT 187 (194)
T ss_pred cCCeEEEEEEeeeeh
Confidence 455667888887643
No 38
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.60 E-value=3.2e-14 Score=126.65 Aligned_cols=128 Identities=21% Similarity=0.305 Sum_probs=100.4
Q ss_pred ceEEeeCCcccHHHHHHHhHhcCC-----ccc-cH----HHHHHHHh----c--CCeEEEEE-ECCeEEEEEEEEeecCC
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVVFP-----VSY-NE----KFYKDVLE----A--GELAKLAY-YNDIVIGAVCCRIDPNN 165 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~~~-----~~~-~~----~~~~~~l~----~--~~~~~v~~-~~g~iVG~~~~~~~~~~ 165 (435)
+..||+++++|++.+.++....+. .+| +. ..+..++. . ....+++. .+|++||++.+.....
T Consensus 46 ~~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~~~- 124 (194)
T PRK10975 46 TTGARVATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLRELND- 124 (194)
T ss_pred CCCcccCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEecCC-
Confidence 456799999999999999777643 223 21 22333322 1 12344444 4789999998875433
Q ss_pred CCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEee
Q psy17026 166 GRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQ 233 (435)
Q Consensus 166 ~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~ 233 (435)
..+++..++|+|+|||+|+|++|++.+++++++.| +.++.+.|..+|.+|++||+|+||+..++..
T Consensus 125 -~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g-~~~i~l~v~~~N~~a~~~yek~Gf~~~~~~~ 190 (194)
T PRK10975 125 -TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARG-LTRLRVATQMGNLAALRLYIRSGANIESTAY 190 (194)
T ss_pred -CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcHHHHHHHHHCCCeEeEEEe
Confidence 24788899999999999999999999999999998 9999999999999999999999999988754
No 39
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.59 E-value=1.9e-14 Score=109.32 Aligned_cols=80 Identities=36% Similarity=0.592 Sum_probs=75.7
Q ss_pred EEECCeEEEEEEEEeecCC---CCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHh
Q psy17026 147 AYYNDIVIGAVCCRIDPNN---GRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKK 223 (435)
Q Consensus 147 ~~~~g~iVG~~~~~~~~~~---~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k 223 (435)
++++|++||++.+...... ...+++..++|+|+|||+|+|+.|++++++.+++.| +..+.+.+..+|..+++||+|
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g-~~~i~~~~~~~n~~~~~~~~k 79 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRG-IKRIYLDVSPDNPAARRFYEK 79 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTT-ESEEEEEEETTGHHHHHHHHH
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcC-ccEEEEEEeCCCHHHHHHHHH
Confidence 5789999999999988875 368999999999999999999999999999999998 999999999999999999999
Q ss_pred CCCE
Q psy17026 224 FGFE 227 (435)
Q Consensus 224 ~GF~ 227 (435)
+||+
T Consensus 80 ~Gf~ 83 (83)
T PF00583_consen 80 LGFE 83 (83)
T ss_dssp TTEE
T ss_pred cCCC
Confidence 9996
No 40
>PRK01346 hypothetical protein; Provisional
Probab=99.58 E-value=6.5e-13 Score=132.27 Aligned_cols=205 Identities=15% Similarity=0.080 Sum_probs=133.8
Q ss_pred CceEEeeCCcccHHHHHHHhHhcCCccccHHHHHHHHh--cCCeEEEEEECCeEEEEEEEEeec-----C-CCCeEEEEE
Q psy17026 102 PKIELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLE--AGELAKLAYYNDIVIGAVCCRIDP-----N-NGRKLYIMT 173 (435)
Q Consensus 102 ~~i~ir~~~~~d~~~l~~l~~~~~~~~~~~~~~~~~l~--~~~~~~v~~~~g~iVG~~~~~~~~-----~-~~~~~~i~~ 173 (435)
+.+.||+++++|++++.+|...+|....+......... .....++++++|++||++.+.... . ..+..+|..
T Consensus 5 ~~~~iR~~~~~D~~~i~~L~~~~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~ 84 (411)
T PRK01346 5 MAITIRTATEEDWPAWFRAAATGFGDSPSDEELEAWRALVEPDRTLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGVTA 84 (411)
T ss_pred CCceeecCCHHHHHHHHHHHHHHcCCCCChHHHHHHHHhcCcCCeEEEEECCEEEEEEEEeccccccCCCCccceeEEEE
Confidence 45789999999999999999999976554443333222 234567888999999999876432 1 124689999
Q ss_pred EEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeeccc
Q psy17026 174 LGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRN 253 (435)
Q Consensus 174 l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~ 253 (435)
++|+|+|||+|+|++||+++++.+++.| +..+.|.+.. .+||+++||........+ ...+..
T Consensus 85 v~V~P~~RgrGig~~Ll~~~l~~a~~~g-~~~~~L~~~~-----~~~Y~r~Gf~~~~~~~~~------------~i~~~~ 146 (411)
T PRK01346 85 VTVAPTHRRRGLLTALMREQLRRIRERG-EPVAALTASE-----GGIYGRFGYGPATYSQSL------------SVDRRR 146 (411)
T ss_pred EEEChhhcCCCHHHHHHHHHHHHHHHCC-CcEEEEECCc-----hhhHhhCCCeeccceEEE------------EEcccc
Confidence 9999999999999999999999999999 8777777543 479999999977653332 222221
Q ss_pred cCCCCCCCCCCccccCCCCcEEEEcCCchh-HHHHHHHhHhhCCCC-----CCHHHHHHHHhcC---------ceEEEEE
Q psy17026 254 KVPNGEEHKDGNVFTMTRPKIELGDVTPHN-IKQLKRLNTVVFPVS-----YNEKFYKDVLEAG---------ELAKLAY 318 (435)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~ir~~~~~d-~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~---------~~~~v~~ 318 (435)
...+.... .... ++..+..+ .+.+.++++..+... -+..++...+.+. ..+.+..
T Consensus 147 ~~~~~~~~--------~~~~--v~~~~~~~~~~~l~~~y~~~~~~~~G~~~R~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 216 (411)
T PRK01346 147 ARLRPDVP--------DGGR--VRLVDPAEARDLLPAVYERWRRARPGALSRPPAWWDDVLADRESRRGGGSPLRALVHP 216 (411)
T ss_pred cccCCCCC--------CCCc--eEEcCHHHHHHHHHHHHHHhhccCCCcccCChHHHHHHhcCcccccCCCCccEEEEEc
Confidence 00000000 1122 34444333 466667776554332 2244555444321 1122334
Q ss_pred eCCEEEEEEEEEecCC
Q psy17026 319 YNDIVIGAVCCRIDPN 334 (435)
Q Consensus 319 ~~~~ivG~~~~~~~~~ 334 (435)
++|+++||+.+.....
T Consensus 217 ~~g~~~Gy~~y~~~~~ 232 (411)
T PRK01346 217 DDGEVDGYALYRVDDT 232 (411)
T ss_pred CCCcccEEEEEEEcCc
Confidence 4889999999887653
No 41
>PTZ00330 acetyltransferase; Provisional
Probab=99.58 E-value=8.6e-14 Score=117.96 Aligned_cols=125 Identities=18% Similarity=0.313 Sum_probs=94.9
Q ss_pred cEEEEcCCchhHHHHHHHhHhhCCCC-CCHHHHHHHHh----cC--ceEEEEEeCCEEEEEEEEEecCC----CCCeEEE
Q psy17026 273 KIELGDVTPHNIKQLKRLNTVVFPVS-YNEKFYKDVLE----AG--ELAKLAYYNDIVIGAVCCRIDPN----NGRKLYI 341 (435)
Q Consensus 273 ~~~ir~~~~~d~~~~~~l~~~~~~~~-~~~~~~~~~~~----~~--~~~~v~~~~~~ivG~~~~~~~~~----~~~~~~i 341 (435)
.+.|++++++|++.+.++.......+ +.......... .+ ...+++..+|++||++.+..... ....+++
T Consensus 6 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~i 85 (147)
T PTZ00330 6 SLELRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGKCVGHI 85 (147)
T ss_pred eEEEEEcccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEeccccccCCCceEEE
Confidence 57899999999999999987655332 33333333222 11 23445556899999998764432 1135689
Q ss_pred EEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 342 MTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 342 ~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
..++|+|+|||+|+|++|++++++++++.+ +..+.+.+ |.+|++||+++||+.+..
T Consensus 86 ~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~-~~~l~l~~---n~~a~~~y~k~GF~~~~~ 141 (147)
T PTZ00330 86 EDVVVDPSYRGQGLGRALISDLCEIARSSG-CYKVILDC---TEDMVAFYKKLGFRACER 141 (147)
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEec---ChHHHHHHHHCCCEEece
Confidence 999999999999999999999999999988 87776664 779999999999998874
No 42
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.58 E-value=8.5e-14 Score=118.53 Aligned_cols=127 Identities=17% Similarity=0.208 Sum_probs=97.1
Q ss_pred CCceEEeeCCcccHH-HHHHHhHhcCC-ccccHHHHHHHHh----cC-C-eEEEEEE--CCeEEEEEEEEeec----CCC
Q psy17026 101 RPKIELGDVTPHNIK-QLKRLNTVVFP-VSYNEKFYKDVLE----AG-E-LAKLAYY--NDIVIGAVCCRIDP----NNG 166 (435)
Q Consensus 101 ~~~i~ir~~~~~d~~-~l~~l~~~~~~-~~~~~~~~~~~l~----~~-~-~~~v~~~--~g~iVG~~~~~~~~----~~~ 166 (435)
.+.+.||+++++|++ .+..+.....+ .+++.+.+...+. .+ . ..+++.+ +|++||++.+.... ...
T Consensus 4 ~~~~~ir~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~ 83 (150)
T PLN02706 4 GEKFKVRRLEISDKSKGFLELLQQLTVVGDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFIRNCG 83 (150)
T ss_pred CCceEEeEhhhcccchHHHHHHHhccCCCCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecccCCC
Confidence 356889999999998 48887766433 3566555544432 22 2 3445555 68999999875332 112
Q ss_pred CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 167 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 167 ~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
..+++..++|+|+|||+|||+.|+++++++|++.| +.++.+.+...|. +||+|+||+..+.
T Consensus 84 ~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g-~~~i~l~~~~~N~---~~y~k~GF~~~g~ 144 (150)
T PLN02706 84 KVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAG-CYKVILDCSEENK---AFYEKCGYVRKEI 144 (150)
T ss_pred cEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcC-CCEEEEEeccccH---HHHHHCcCEEehh
Confidence 45678899999999999999999999999999998 9999999999884 6999999998763
No 43
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.57 E-value=5.5e-14 Score=116.06 Aligned_cols=118 Identities=23% Similarity=0.318 Sum_probs=91.1
Q ss_pred EEeeCCcccHHHHHHHhHhcCCccccHHH---HHHHHhcCCeEEEEEECCeEEEEEEEEeec-----CCCCeEEEEEEEe
Q psy17026 105 ELGDVTPHNIKQLKRLNTVVFPVSYNEKF---YKDVLEAGELAKLAYYNDIVIGAVCCRIDP-----NNGRKLYIMTLGC 176 (435)
Q Consensus 105 ~ir~~~~~d~~~l~~l~~~~~~~~~~~~~---~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~-----~~~~~~~i~~l~V 176 (435)
+||+++++|.+++.+|...+|+...+... .......+...++++++|++||.+.+.... .....+++.+++|
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v 80 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLYGPGRCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAV 80 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHTTEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccCcCcEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEE
Confidence 47999999999999999999986655431 222222456789999999999999886542 1115789999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEE
Q psy17026 177 LSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEI 228 (435)
Q Consensus 177 ~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~ 228 (435)
+|+|||+|+|++|++++++.++++| +..+.+.. ...+||+++||+.
T Consensus 81 ~p~~R~~Gl~~~L~~~~~~~~~~~g-~~~~~l~~-----~~~~~Y~~~G~~~ 126 (127)
T PF13527_consen 81 DPEYRGRGLGRQLMRALLERARERG-VPFIFLFP-----SSPPFYRRFGFEY 126 (127)
T ss_dssp -GGGTTSSHHHHHHHHHHHHHHHTT--SEEEEE------SSHHHHHHTTEEE
T ss_pred CHHHcCCCHHHHHHHHHHHHHHhCC-CCEEEEec-----CChhhhhcCCCEE
Confidence 9999999999999999999999998 88777765 2379999999985
No 44
>PHA00673 acetyltransferase domain containing protein
Probab=99.57 E-value=6.5e-14 Score=116.70 Aligned_cols=122 Identities=11% Similarity=0.108 Sum_probs=97.8
Q ss_pred eeCCcccHHHHHHHhHhcC----------CccccHHHHHHHHhcC-CeEEEEEECCeEEEEEEEEeecCCC----CeEEE
Q psy17026 107 GDVTPHNIKQLKRLNTVVF----------PVSYNEKFYKDVLEAG-ELAKLAYYNDIVIGAVCCRIDPNNG----RKLYI 171 (435)
Q Consensus 107 r~~~~~d~~~l~~l~~~~~----------~~~~~~~~~~~~l~~~-~~~~v~~~~g~iVG~~~~~~~~~~~----~~~~i 171 (435)
-.++.+|++.|..|..+.- +.+|... +..+..++ ...++++++|++||++.+...+... ..+.|
T Consensus 10 ~~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~~a-f~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~~I 88 (154)
T PHA00673 10 AFAELADAPTFASLCAEYAHESANADLAGRAPDHHA-YAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPHFKGQLIGTT 88 (154)
T ss_pred hhccHhhHHHHHHHHHhcccccccccccccchhHHH-HHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCccCCccEEEE
Confidence 4578999999999976521 0112222 45555544 5677888999999999998777442 56789
Q ss_pred EEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 172 MTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 172 ~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
..++|+|++||+|||++|+++++++|++.| |..+++...++- ..+.||.++|++...+
T Consensus 89 e~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~G-c~~lyis~~p~~-~tv~fy~~~g~~~~~~ 146 (154)
T PHA00673 89 ESIFVAAAHRPGGAGMALLRATEALARDLG-ATGLYVSGPTEG-RLVQLLPAAGYRETNR 146 (154)
T ss_pred EEEEEChhccCCCHHHHHHHHHHHHHHHCC-CCEEEEecCCCc-cchHHHHhCCchhhch
Confidence 999999999999999999999999999999 999999887654 6799999999997654
No 45
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.57 E-value=2.3e-13 Score=120.32 Aligned_cols=151 Identities=17% Similarity=0.203 Sum_probs=114.3
Q ss_pred CCcEEEEcCCchhHHHHHHHhHhhC------CCCCCH-----HHHHHHH-hcCceEEEEEeCCEEEEEEEEEecCCCCCe
Q psy17026 271 RPKIELGDVTPHNIKQLKRLNTVVF------PVSYNE-----KFYKDVL-EAGELAKLAYYNDIVIGAVCCRIDPNNGRK 338 (435)
Q Consensus 271 ~~~~~ir~~~~~d~~~~~~l~~~~~------~~~~~~-----~~~~~~~-~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~ 338 (435)
...+.+|+++++|++.+.++..... ..++.. ..+.... ......|++..+|++||++.+.........
T Consensus 4 ~~~l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~~~~~ 83 (186)
T PRK15130 4 AHSVKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRR 83 (186)
T ss_pred CCeeEEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEECCEEEEEEEEEeecCCCCe
Confidence 3467899999999999999864321 111111 1122222 234457788889999999987654433234
Q ss_pred EEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccc-cccccceeee
Q psy17026 339 LYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYK-RIEPADAYVL 417 (435)
Q Consensus 339 ~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~-~~~~~~~~~m 417 (435)
+.+ .++|+|+|||+|+|++++..+++++++.-+++++.+.|...|.+|++||+|+||+.++..++++. ++.+.|.+.|
T Consensus 84 ~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~~~~~~~~~~~~~g~~~d~~~~ 162 (186)
T PRK15130 84 AEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFEVEGELIHEFFINGEYRNTIRM 162 (186)
T ss_pred EEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHCCCEEEEEEeheEEECCEEEEEEEE
Confidence 444 69999999999999999999999998753399999999999999999999999999999887754 5567888888
Q ss_pred eeccc
Q psy17026 418 QKTLR 422 (435)
Q Consensus 418 ~~~l~ 422 (435)
.+.-.
T Consensus 163 ~~~~~ 167 (186)
T PRK15130 163 CIFQH 167 (186)
T ss_pred EeeHH
Confidence 87754
No 46
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.56 E-value=6e-14 Score=106.51 Aligned_cols=80 Identities=36% Similarity=0.592 Sum_probs=75.1
Q ss_pred EEeCCEEEEEEEEEecCCC---CCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHh
Q psy17026 317 AYYNDIVIGAVCCRIDPNN---GRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKK 393 (435)
Q Consensus 317 ~~~~~~ivG~~~~~~~~~~---~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k 393 (435)
++++|++||++.+...... ....++..++|+|+|||+|+|+.|++.+++++++.+ +..+.+.+...|..+++||+|
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g-~~~i~~~~~~~n~~~~~~~~k 79 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRG-IKRIYLDVSPDNPAARRFYEK 79 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTT-ESEEEEEEETTGHHHHHHHHH
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcC-ccEEEEEEeCCCHHHHHHHHH
Confidence 4679999999999888775 378999999999999999999999999999999988 999999999999999999999
Q ss_pred cCcE
Q psy17026 394 FGFE 397 (435)
Q Consensus 394 ~GF~ 397 (435)
+||+
T Consensus 80 ~Gf~ 83 (83)
T PF00583_consen 80 LGFE 83 (83)
T ss_dssp TTEE
T ss_pred cCCC
Confidence 9996
No 47
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.56 E-value=2.5e-13 Score=120.04 Aligned_cols=150 Identities=17% Similarity=0.206 Sum_probs=112.2
Q ss_pred CceEEeeCCcccHHHHHHHhHhcC------CccccH-----HHHHHHH-hcCCeEEEEEECCeEEEEEEEEeecCCCCeE
Q psy17026 102 PKIELGDVTPHNIKQLKRLNTVVF------PVSYNE-----KFYKDVL-EAGELAKLAYYNDIVIGAVCCRIDPNNGRKL 169 (435)
Q Consensus 102 ~~i~ir~~~~~d~~~l~~l~~~~~------~~~~~~-----~~~~~~l-~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~ 169 (435)
..+.||+++++|++.+.++..... ..++.. .++...+ ......+++..+|++||++.+.........+
T Consensus 5 ~~l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~~~~~~ 84 (186)
T PRK15130 5 HSVKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRA 84 (186)
T ss_pred CeeEEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEECCEEEEEEEEEeecCCCCeE
Confidence 457899999999999999854321 111111 1122222 2334577888899999999886654333334
Q ss_pred EEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccc-cCCCCceEEEE
Q psy17026 170 YIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYK-RIEPADAYVLQ 248 (435)
Q Consensus 170 ~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~-~~~~~d~~~m~ 248 (435)
.+ .++|+|+|||+|+|+++++.+++++.+.-++.++.+.|...|.+|++||+|+||+..+....++. +|...|.+.|.
T Consensus 85 ~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~~~~~~~~~~~~~g~~~d~~~~~ 163 (186)
T PRK15130 85 EF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFEVEGELIHEFFINGEYRNTIRMC 163 (186)
T ss_pred EE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHCCCEEEEEEeheEEECCEEEEEEEEE
Confidence 44 69999999999999999999999998653399999999999999999999999999999887753 55667777777
Q ss_pred eecc
Q psy17026 249 KTLR 252 (435)
Q Consensus 249 ~~l~ 252 (435)
....
T Consensus 164 ~~~~ 167 (186)
T PRK15130 164 IFQH 167 (186)
T ss_pred eeHH
Confidence 6544
No 48
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.55 E-value=1.3e-13 Score=119.55 Aligned_cols=122 Identities=18% Similarity=0.241 Sum_probs=95.1
Q ss_pred CceEEeeCCcccHHHHHHHhHhcCCccc-cHHHHHHHHhcCCeEEEEE-ECCeEEEEEEEEeecCCCCeEEEEEEEeCCC
Q psy17026 102 PKIELGDVTPHNIKQLKRLNTVVFPVSY-NEKFYKDVLEAGELAKLAY-YNDIVIGAVCCRIDPNNGRKLYIMTLGCLSP 179 (435)
Q Consensus 102 ~~i~ir~~~~~d~~~l~~l~~~~~~~~~-~~~~~~~~l~~~~~~~v~~-~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~ 179 (435)
+++.||+++++|.+.+..+......... ........+.+...++++. .+|++||++.+..... ..+.+..++|+|+
T Consensus 4 ~~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~iiG~~~~~~~~~--~~~~i~~l~V~p~ 81 (169)
T PRK07922 4 GAITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVMWE--DLAEIRTVAVDPA 81 (169)
T ss_pred CCceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhhcCcEEEEEecCCcEEEEEEEeecCC--CceEEEEEEECHH
Confidence 5688999999999999999766443211 1112223334445567887 8999999998776443 3467889999999
Q ss_pred ccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 180 YRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 180 ~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
|||+|+|++|++++++++++.| +..+.+.+. +++||+|+||+..+.
T Consensus 82 ~rgkGiG~~Ll~~~~~~a~~~g-~~~l~~~~~-----~~~fY~k~GF~~~~~ 127 (169)
T PRK07922 82 ARGRGVGHAIVERLLDVARELG-LSRVFVLTF-----EVEFFARHGFVEIDG 127 (169)
T ss_pred HhCCCHHHHHHHHHHHHHHHcC-CCEEEEEec-----cHHHHHHCCCEECcc
Confidence 9999999999999999999999 999988764 378999999998653
No 49
>PRK10514 putative acetyltransferase; Provisional
Probab=99.54 E-value=2.1e-13 Score=115.38 Aligned_cols=132 Identities=18% Similarity=0.181 Sum_probs=94.2
Q ss_pred ceEEeeCCcccHHHHHHHhHhcCC------ccccHHHHHHHHh---cCCeEEEE-EECCeEEEEEEEEeecCCCCeEEEE
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVVFP------VSYNEKFYKDVLE---AGELAKLA-YYNDIVIGAVCCRIDPNNGRKLYIM 172 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~~~------~~~~~~~~~~~l~---~~~~~~v~-~~~g~iVG~~~~~~~~~~~~~~~i~ 172 (435)
|+.||+++++|++.+.++....+. .+++.+.+...+. .....+++ ..+|++||++.+.. ..+.
T Consensus 1 m~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~-------~~~~ 73 (145)
T PRK10514 1 MISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVDERDQPVGFMLLSG-------GHME 73 (145)
T ss_pred CceeeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEecCCcEEEEEEEec-------CcEe
Confidence 367899999999999998765421 1222333322221 22334444 46899999998742 2366
Q ss_pred EEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEE
Q psy17026 173 TLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQ 248 (435)
Q Consensus 173 ~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~ 248 (435)
.++|+|+|||+|+|++|++++++.+ .++.+.+...|.+|++||+|+||+..++...-.. |...+.+.|.
T Consensus 74 ~~~v~p~~rgkGig~~Ll~~~~~~~------~~i~~~v~~~N~~a~~~yek~Gf~~~~~~~~~~~-~~~~~~~~~~ 142 (145)
T PRK10514 74 ALFVDPDVRGCGVGRMLVEHALSLH------PELTTDVNEQNEQAVGFYKKMGFKVTGRSEVDDQ-GRPYPLLHLA 142 (145)
T ss_pred EEEECHHhccCCHHHHHHHHHHHhc------cccEEEeecCCHHHHHHHHHCCCEEecccccCCC-CCccceEEEE
Confidence 8999999999999999999999753 3567899999999999999999999887654332 3445555553
No 50
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.54 E-value=3.6e-13 Score=114.89 Aligned_cols=128 Identities=24% Similarity=0.289 Sum_probs=95.5
Q ss_pred EeeCC-cccHHHHHHHhHhc----C-Ccccc---HHHHHHHHh--cCCeEEEEEECCeEEEEEEEEeecC----CCCeEE
Q psy17026 106 LGDVT-PHNIKQLKRLNTVV----F-PVSYN---EKFYKDVLE--AGELAKLAYYNDIVIGAVCCRIDPN----NGRKLY 170 (435)
Q Consensus 106 ir~~~-~~d~~~l~~l~~~~----~-~~~~~---~~~~~~~l~--~~~~~~v~~~~g~iVG~~~~~~~~~----~~~~~~ 170 (435)
||+++ ++|++.|.++.... | ...++ .+.+...+. +....++++.+|+++|++.+..... ......
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~ 80 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRG 80 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEE
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccccCCCCEEE
Confidence 58999 99999999996544 2 12222 223333442 3446889999999999998865222 124567
Q ss_pred EEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEee
Q psy17026 171 IMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQ 233 (435)
Q Consensus 171 i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~ 233 (435)
+..++++|++||+|+|+.+++.+++.+.+..++.++.+.+..+|.+|+++|+|+||+.+++..
T Consensus 81 ~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~GF~~~g~~~ 143 (152)
T PF13523_consen 81 IHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKAGFRKVGEFE 143 (152)
T ss_dssp EEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHTT-EEEEEEE
T ss_pred EeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHcCCEEeeEEE
Confidence 888899999999999999999999999998339999999999999999999999999999865
No 51
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.53 E-value=2.9e-13 Score=137.96 Aligned_cols=133 Identities=17% Similarity=0.207 Sum_probs=108.5
Q ss_pred CCceEEeeC-CcccHHHHHHHhHhcCCccccHHHHHHHHhc-CCeEEEEEE--CCeEEEEEEEEeec----CCCCeEEEE
Q psy17026 101 RPKIELGDV-TPHNIKQLKRLNTVVFPVSYNEKFYKDVLEA-GELAKLAYY--NDIVIGAVCCRIDP----NNGRKLYIM 172 (435)
Q Consensus 101 ~~~i~ir~~-~~~d~~~l~~l~~~~~~~~~~~~~~~~~l~~-~~~~~v~~~--~g~iVG~~~~~~~~----~~~~~~~i~ 172 (435)
...+.||++ +++|++.+.+|...+...+++...+...+.. ...++++.+ +|++||++...... ......++.
T Consensus 80 ~~g~~IR~~~~~~D~~~I~~L~~~~~~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i~ 159 (547)
T TIGR03103 80 PRGFTVRRLRGPADVDAINRLYAARGMVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSLW 159 (547)
T ss_pred CCCcEEEeCCChhHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEEE
Confidence 346889998 7899999999999987767776666555443 446777775 69999999753221 111346788
Q ss_pred EEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeec
Q psy17026 173 TLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQH 234 (435)
Q Consensus 173 ~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~ 234 (435)
.++|+|+|||+|+|++|++++++++++.| +..+.+.|..+|.+|++||+|+||+.......
T Consensus 160 ~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G-~~~i~L~V~~~N~~Ai~fY~klGf~~~~~y~~ 220 (547)
T TIGR03103 160 CLAVDPQAAHPGVGEALVRALAEHFQSRG-CAYMDLSVMHDNEQAIALYEKLGFRRIPVFAL 220 (547)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEEEcCCCHHHHHHHHHCCCEEeeEEEE
Confidence 99999999999999999999999999999 99999999999999999999999998775443
No 52
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.53 E-value=4.2e-13 Score=114.92 Aligned_cols=139 Identities=17% Similarity=0.174 Sum_probs=105.2
Q ss_pred EeeCCcccHHHHHHHhHhc----C--Ccc-ccH----HHHHHHHhcC-CeEEEEEECCeEEEEEEEEeecCCCCeEEEEE
Q psy17026 106 LGDVTPHNIKQLKRLNTVV----F--PVS-YNE----KFYKDVLEAG-ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMT 173 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~----~--~~~-~~~----~~~~~~l~~~-~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~ 173 (435)
+|+++++|++.+.++.... + ..+ .+. .++....... ...+++..+|++||++.+...........++
T Consensus 3 lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~~~~g- 81 (156)
T TIGR03585 3 FTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDINLVHKSAFWG- 81 (156)
T ss_pred cccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecChhhCeEEEE-
Confidence 5999999999999984321 1 112 332 2333333332 3567788899999999997655333344454
Q ss_pred EEeCCCccCCCHHHHHHHHHHHHHHhc-CCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeeccc-ccCCCCceEEE
Q psy17026 174 LGCLSPYRRLGIGSMMLEHILNYVEKD-GNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYY-KRIEPADAYVL 247 (435)
Q Consensus 174 l~V~p~~rg~GiG~~Ll~~~~~~a~~~-g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~-~~~~~~d~~~m 247 (435)
+++.|.+| +|+|+.++..+++++.+. + +.++.+.|...|.+|++||+|+||+..+..+.+. .+|...|.+.|
T Consensus 82 ~~~~~~~~-~G~g~~~~~~~~~~a~~~~~-~~~i~~~v~~~N~~s~~~y~k~Gf~~~g~~~~~~~~~g~~~d~~~~ 155 (156)
T TIGR03585 82 IYANPFCK-PGVGSVLEEAALEYAFEHLG-LHKLSLEVLEFNNKALKLYEKFGFEREGVFRQGIFKEGEYYDVLLM 155 (156)
T ss_pred EEeChhhh-cCchHHHHHHHHHHHHhhCC-eeEEEEEEeccCHHHHHHHHHcCCeEeeeehhheeECCeEEEEEEe
Confidence 55899999 999999999999999874 6 9999999999999999999999999999988774 45566666665
No 53
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.53 E-value=2.4e-13 Score=112.24 Aligned_cols=119 Identities=23% Similarity=0.314 Sum_probs=91.0
Q ss_pred EEEcCCchhHHHHHHHhHhhCCCCCCHH---HHHHHHhcCceEEEEEeCCEEEEEEEEEec-----CCCCCeEEEEEEEE
Q psy17026 275 ELGDVTPHNIKQLKRLNTVVFPVSYNEK---FYKDVLEAGELAKLAYYNDIVIGAVCCRID-----PNNGRKLYIMTLGC 346 (435)
Q Consensus 275 ~ir~~~~~d~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~-----~~~~~~~~i~~i~V 346 (435)
+||+++++|++++.++...+|+...... .+....-.+..++++++++++||.+.+... +.....+++..++|
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v 80 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLYGPGRCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAV 80 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHTTEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccCcCcEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEE
Confidence 3799999999999999999998776554 122222245678999999999999887553 11115789999999
Q ss_pred CCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEE
Q psy17026 347 LSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIV 399 (435)
Q Consensus 347 ~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~ 399 (435)
+|+|||+|+|++|++++++.++++| +..+.+.. ....||+++||+.+
T Consensus 81 ~p~~R~~Gl~~~L~~~~~~~~~~~g-~~~~~l~~-----~~~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 81 DPEYRGRGLGRQLMRALLERARERG-VPFIFLFP-----SSPPFYRRFGFEYA 127 (127)
T ss_dssp -GGGTTSSHHHHHHHHHHHHHHHTT--SEEEEE------SSHHHHHHTTEEEE
T ss_pred CHHHcCCCHHHHHHHHHHHHHHhCC-CCEEEEec-----CChhhhhcCCCEEC
Confidence 9999999999999999999999998 77666655 24689999999864
No 54
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.52 E-value=3.7e-13 Score=109.25 Aligned_cols=103 Identities=25% Similarity=0.390 Sum_probs=80.3
Q ss_pred cHHHHHHHhHhcCCc-------------cccHHHHHHHHhcC-CeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCC
Q psy17026 113 NIKQLKRLNTVVFPV-------------SYNEKFYKDVLEAG-ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLS 178 (435)
Q Consensus 113 d~~~l~~l~~~~~~~-------------~~~~~~~~~~l~~~-~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p 178 (435)
|++++.+|...++.. .++.+.+...+..+ ...++++++|++||++.+. . ..+|..++|+|
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~--~----~~~i~~l~v~p 74 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE--P----DGEISHLYVLP 74 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE--T----CEEEEEEEE-G
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc--C----CCeEEEEEECh
Confidence 677788776655421 13455666677664 5789999999999999986 2 13599999999
Q ss_pred CccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCC
Q psy17026 179 PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGF 226 (435)
Q Consensus 179 ~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF 226 (435)
+|||+|+|++|++++++.++. | +..+.+. .|..|.+||+++||
T Consensus 75 ~~r~~Gig~~Ll~~~~~~~~~-~-~~~l~~~---~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 75 EYRGRGIGRALLDAAEKEAKD-G-IRRLTVE---ANERARRFYRKLGF 117 (117)
T ss_dssp GGTTSSHHHHHHHHHHHHHTT-T-CEEEEEE---C-HHHHHHHHHTT-
T ss_pred hhcCCcHHHHHHHHHHHHHHc-C-CcEEEEE---eCHHHHHHHHhCCC
Confidence 999999999999999999976 7 7877776 88899999999998
No 55
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.52 E-value=9.8e-13 Score=112.24 Aligned_cols=128 Identities=24% Similarity=0.299 Sum_probs=95.6
Q ss_pred EEcCC-chhHHHHHHHhHhh----C-CCCCCH---HHHHHHHh--cCceEEEEEeCCEEEEEEEEEecCC----CCCeEE
Q psy17026 276 LGDVT-PHNIKQLKRLNTVV----F-PVSYNE---KFYKDVLE--AGELAKLAYYNDIVIGAVCCRIDPN----NGRKLY 340 (435)
Q Consensus 276 ir~~~-~~d~~~~~~l~~~~----~-~~~~~~---~~~~~~~~--~~~~~~v~~~~~~ivG~~~~~~~~~----~~~~~~ 340 (435)
+|+++ .+|++.+.++.++. + ...+.. +.+.+.+. .....+++..+|+++||+.+..... ......
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~ 80 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRG 80 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEE
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccccCCCCEEE
Confidence 58899 99999999987543 2 222332 23333432 4556788999999999998865222 225667
Q ss_pred EEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEee
Q psy17026 341 IMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQ 403 (435)
Q Consensus 341 i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~ 403 (435)
+..++|+|++||+|+|+.++..+++.+++..++.++.+++...|.+|+++|+|+||+.+++..
T Consensus 81 ~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~GF~~~g~~~ 143 (152)
T PF13523_consen 81 IHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKAGFRKVGEFE 143 (152)
T ss_dssp EEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHTT-EEEEEEE
T ss_pred EeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHcCCEEeeEEE
Confidence 888899999999999999999999999998349999999999999999999999999999875
No 56
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.51 E-value=6.9e-13 Score=113.57 Aligned_cols=139 Identities=17% Similarity=0.218 Sum_probs=105.8
Q ss_pred EEcCCchhHHHHHHHhHhh------CCCC-CCH----HHHHHHHhc-CceEEEEEeCCEEEEEEEEEecCCCCCeEEEEE
Q psy17026 276 LGDVTPHNIKQLKRLNTVV------FPVS-YNE----KFYKDVLEA-GELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMT 343 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~------~~~~-~~~----~~~~~~~~~-~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~ 343 (435)
+|+++++|++.+.++.... +..+ .+. .++...... ....+++..+|++||++.+...........+ .
T Consensus 3 lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~~~~-g 81 (156)
T TIGR03585 3 FTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDINLVHKSAFW-G 81 (156)
T ss_pred cccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecChhhCeEEE-E
Confidence 6899999999999875321 1112 222 223333332 3356777889999999988765533234455 4
Q ss_pred EEECCCcccCChHHHHHHHHHHHHHHc-CCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecc-cccccccceeee
Q psy17026 344 LGCLSPYRRLGIGSMMLEHILNYVEKD-GNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHY-YKRIEPADAYVL 417 (435)
Q Consensus 344 i~V~p~~rgkGlg~~Ll~~~~~~~~~~-g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~-y~~~~~~~~~~m 417 (435)
+.+.|.+| +|+|++++..+++++++. + ++.+.+.|...|.+|++||+|+||+.+++.+.+ +.+|...|.+.|
T Consensus 82 ~~~~~~~~-~G~g~~~~~~~~~~a~~~~~-~~~i~~~v~~~N~~s~~~y~k~Gf~~~g~~~~~~~~~g~~~d~~~~ 155 (156)
T TIGR03585 82 IYANPFCK-PGVGSVLEEAALEYAFEHLG-LHKLSLEVLEFNNKALKLYEKFGFEREGVFRQGIFKEGEYYDVLLM 155 (156)
T ss_pred EEeChhhh-cCchHHHHHHHHHHHHhhCC-eeEEEEEEeccCHHHHHHHHHcCCeEeeeehhheeECCeEEEEEEe
Confidence 55999999 999999999999999875 6 999999999999999999999999999998887 455667788776
No 57
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.50 E-value=1.1e-12 Score=133.67 Aligned_cols=135 Identities=18% Similarity=0.201 Sum_probs=108.1
Q ss_pred CCCcEEEEcC-CchhHHHHHHHhHhhCCCCCCHHHHHHHHh-cCceEEEEEe--CCEEEEEEEEEec----CCCCCeEEE
Q psy17026 270 TRPKIELGDV-TPHNIKQLKRLNTVVFPVSYNEKFYKDVLE-AGELAKLAYY--NDIVIGAVCCRID----PNNGRKLYI 341 (435)
Q Consensus 270 ~~~~~~ir~~-~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~--~~~ivG~~~~~~~----~~~~~~~~i 341 (435)
....+.||++ ++.|++.+.+++......++....+...+. ....++++.+ +|++|||+..... .+.....++
T Consensus 79 ~~~g~~IR~~~~~~D~~~I~~L~~~~~~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i 158 (547)
T TIGR03103 79 TPRGFTVRRLRGPADVDAINRLYAARGMVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSL 158 (547)
T ss_pred CCCCcEEEeCCChhHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEE
Confidence 4456889997 689999999999887666666665544443 3455677764 6899999875322 112234688
Q ss_pred EEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecc
Q psy17026 342 MTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHY 405 (435)
Q Consensus 342 ~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 405 (435)
..++|+|+|||+|+|++|++.+++++++.| +..+.+.|..+|..+++||+|+||+.+......
T Consensus 159 ~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G-~~~i~L~V~~~N~~Ai~fY~klGf~~~~~y~~~ 221 (547)
T TIGR03103 159 WCLAVDPQAAHPGVGEALVRALAEHFQSRG-CAYMDLSVMHDNEQAIALYEKLGFRRIPVFALK 221 (547)
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEEEcCCCHHHHHHHHHCCCEEeeEEEEe
Confidence 999999999999999999999999999998 999999999999999999999999988765443
No 58
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.49 E-value=8.7e-13 Score=125.26 Aligned_cols=131 Identities=16% Similarity=0.239 Sum_probs=101.4
Q ss_pred CCceEEeeCCc-ccHHHHHHHhHhcCC-----ccccHHHHHHHHh----cCCeEEEEEE--CCeEEEEEEEEeecCCCCe
Q psy17026 101 RPKIELGDVTP-HNIKQLKRLNTVVFP-----VSYNEKFYKDVLE----AGELAKLAYY--NDIVIGAVCCRIDPNNGRK 168 (435)
Q Consensus 101 ~~~i~ir~~~~-~d~~~l~~l~~~~~~-----~~~~~~~~~~~l~----~~~~~~v~~~--~g~iVG~~~~~~~~~~~~~ 168 (435)
...+.+|++++ .|.+.+..+....|. ..|+.+.+..... .+...+++.+ +|++||++.+.........
T Consensus 147 ~~g~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vG~~~~~~~~~~~~~ 226 (292)
T TIGR03448 147 PDGVTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFHWTKVHPDEPAL 226 (292)
T ss_pred CCCeEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEECCCCcEEEEEEEEecCCCCce
Confidence 44789999864 588888888777764 2365554443322 1334667776 6899999866654332234
Q ss_pred EEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEe
Q psy17026 169 LYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETK 232 (435)
Q Consensus 169 ~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~ 232 (435)
.++..++|+|+|||+|+|+.|++++++++++.| +..+.+.+..+|.+|++||+|+||+..++.
T Consensus 227 ~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g-~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~ 289 (292)
T TIGR03448 227 GEVYVVGVDPAAQGRGLGDALTLIGLHHLAARG-LPAVMLYVEADNEAAVRTYEKLGFTVAEVD 289 (292)
T ss_pred eEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEEEeCCCHHHHHHHHHcCCEEcccc
Confidence 677778999999999999999999999999998 999999999999999999999999987653
No 59
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.49 E-value=1.1e-12 Score=111.75 Aligned_cols=126 Identities=17% Similarity=0.189 Sum_probs=94.7
Q ss_pred CcEEEEcCCchhHH-HHHHHhHhhCC-CCCCHHHHHHHHh----c--CceEEEEEe--CCEEEEEEEEEecC----CCCC
Q psy17026 272 PKIELGDVTPHNIK-QLKRLNTVVFP-VSYNEKFYKDVLE----A--GELAKLAYY--NDIVIGAVCCRIDP----NNGR 337 (435)
Q Consensus 272 ~~~~ir~~~~~d~~-~~~~l~~~~~~-~~~~~~~~~~~~~----~--~~~~~v~~~--~~~ivG~~~~~~~~----~~~~ 337 (435)
..+.||+++++|.+ .+..+...... .+++...+.+.+. . ....+++.. ++++||++.+.... ....
T Consensus 5 ~~~~ir~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~ 84 (150)
T PLN02706 5 EKFKVRRLEISDKSKGFLELLQQLTVVGDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFIRNCGK 84 (150)
T ss_pred CceEEeEhhhcccchHHHHHHHhccCCCCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecccCCCc
Confidence 45789999999987 47777765433 3466544444432 1 223445555 68999998774321 1224
Q ss_pred eEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 338 KLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 338 ~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
.+++..++|+|+|||+|+|+.|++.+++++++.| ++++.+.+...|. +||+|+||+.++.
T Consensus 85 ~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g-~~~i~l~~~~~N~---~~y~k~GF~~~g~ 144 (150)
T PLN02706 85 VGHIEDVVVDSAARGKGLGKKIIEALTEHARSAG-CYKVILDCSEENK---AFYEKCGYVRKEI 144 (150)
T ss_pred EEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcC-CCEEEEEeccccH---HHHHHCcCEEehh
Confidence 5678889999999999999999999999999988 9999999999884 5999999999874
No 60
>PRK07757 acetyltransferase; Provisional
Probab=99.49 E-value=6e-13 Score=113.55 Aligned_cols=118 Identities=19% Similarity=0.249 Sum_probs=92.3
Q ss_pred ceEEeeCCcccHHHHHHHhHhcCCcc----ccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCC
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVVFPVS----YNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLS 178 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~~~~~----~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p 178 (435)
++.||+++++|++.+.++.....+.. .+.+.+.. .-..++++..+|++||++.+...... .+++..++|+|
T Consensus 1 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~lvG~~~l~~~~~~--~~~i~~v~V~p 75 (152)
T PRK07757 1 MMEIRKARLSDVKAIHALINVYAKKGLMLPRSLDELYE---NIRDFYVAEEEGEIVGCCALHILWED--LAEIRSLAVSE 75 (152)
T ss_pred CceEeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHh---ccCcEEEEEECCEEEEEEEEEeccCC--ceEEEEEEECH
Confidence 36789999999999999976644322 22222222 22346778889999999998765432 46788999999
Q ss_pred CccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 179 PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 179 ~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
+|||+|+|++|++++++.+.+.| +..+.+.+. +.+||+|+||+..+.
T Consensus 76 ~~rg~Glg~~Ll~~l~~~a~~~g-~~~i~~~~~-----~~~~Y~k~GF~~~~~ 122 (152)
T PRK07757 76 DYRGQGIGRMLVEACLEEARELG-VKRVFALTY-----QPEFFEKLGFREVDK 122 (152)
T ss_pred HHcCCCHHHHHHHHHHHHHHhCC-CCeEEEEeC-----cHHHHHHCCCEEccc
Confidence 99999999999999999999988 888876552 468999999998875
No 61
>KOG3216|consensus
Probab=99.49 E-value=1.5e-12 Score=105.24 Aligned_cols=129 Identities=22% Similarity=0.229 Sum_probs=101.0
Q ss_pred cEEEEcCCchhHHHHHHHhHhhC-------CCCCCHHHHHH--HHhcC-ceEEEEEe---CCEEEEEEEEEecCCCC---
Q psy17026 273 KIELGDVTPHNIKQLKRLNTVVF-------PVSYNEKFYKD--VLEAG-ELAKLAYY---NDIVIGAVCCRIDPNNG--- 336 (435)
Q Consensus 273 ~~~ir~~~~~d~~~~~~l~~~~~-------~~~~~~~~~~~--~~~~~-~~~~v~~~---~~~ivG~~~~~~~~~~~--- 336 (435)
.+.||.+++.|.+.+..+..+.- +..-....+.. ..+++ ..++++.. ++.++||+.+...-+.-
T Consensus 3 ~~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~k 82 (163)
T KOG3216|consen 3 NIRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLGK 82 (163)
T ss_pred ceEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeeccccccccc
Confidence 57899999999999998875431 11222233333 23333 23444443 78999999877655432
Q ss_pred CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEe
Q psy17026 337 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETK 402 (435)
Q Consensus 337 ~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~ 402 (435)
...||.+++|.|.|||+|+|+.|+..+-+.+.+.| +.++...|..-|.+|+.||++.|++.....
T Consensus 83 ~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G-~~rv~w~vldwN~rAi~lY~k~gaq~l~~W 147 (163)
T KOG3216|consen 83 QGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLG-TPRVEWVVLDWNHRAILLYEKVGAQDLKEW 147 (163)
T ss_pred ceEEEEeeEecchhcccChHHHHHHHHHHHHHHcC-CCcEEEEEeccchhHHHHHHHhCcccccee
Confidence 56899999999999999999999999999999999 999999999999999999999999988763
No 62
>KOG3234|consensus
Probab=99.49 E-value=1.6e-13 Score=111.06 Aligned_cols=150 Identities=22% Similarity=0.359 Sum_probs=123.8
Q ss_pred eEEeeCCcccHHHHHHHhHhcCCccccHHHHHHH-HhcCCeEEEEEE-CCeEEEEEEEEeecCCC-CeEEEEEEEeCCCc
Q psy17026 104 IELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDV-LEAGELAKLAYY-NDIVIGAVCCRIDPNNG-RKLYIMTLGCLSPY 180 (435)
Q Consensus 104 i~ir~~~~~d~~~l~~l~~~~~~~~~~~~~~~~~-l~~~~~~~v~~~-~g~iVG~~~~~~~~~~~-~~~~i~~l~V~p~~ 180 (435)
.++|+.+++|+-..-.+.-......++-.++-.. +..++.+.+++. ++++-|++.-...+... -++++..+.|.|+|
T Consensus 2 tt~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~ 81 (173)
T KOG3234|consen 2 TTIRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDY 81 (173)
T ss_pred CccccccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeeccccCcceeeEEEEEEechhH
Confidence 3568888888877776655555566665544443 345666666665 68899999886665443 56899999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeecccc
Q psy17026 181 RRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRNK 254 (435)
Q Consensus 181 rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~~ 254 (435)
|+.|+|+.|+..+++...... ..-+.|.|..+|.-|+.+|+++||....+...||..|..+|++-|++.|+.+
T Consensus 82 Rrl~la~~lm~~led~~d~~~-a~fvDLfVr~sN~iAI~mYkkLGY~~YR~Vi~YY~~g~deda~dMRKalSrD 154 (173)
T KOG3234|consen 82 RRLGLAAKLMDTLEDVSDVDN-AYFVDLFVRVSNQIAIDMYKKLGYSVYRTVIEYYSVGPDEDAYDMRKALSRD 154 (173)
T ss_pred HHHHHHHHHHHHHHHHHHhhh-hheeeeeeeccchhHHHHHHhcCceEEEeeeeeeccCCCcchHhhhhhhccC
Confidence 999999999999999999887 8999999999999999999999999999999999878889999999999854
No 63
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.49 E-value=9.6e-13 Score=114.13 Aligned_cols=122 Identities=18% Similarity=0.241 Sum_probs=94.1
Q ss_pred CcEEEEcCCchhHHHHHHHhHhhCCCCC-CHHHHHHHHhcCceEEEEE-eCCEEEEEEEEEecCCCCCeEEEEEEEECCC
Q psy17026 272 PKIELGDVTPHNIKQLKRLNTVVFPVSY-NEKFYKDVLEAGELAKLAY-YNDIVIGAVCCRIDPNNGRKLYIMTLGCLSP 349 (435)
Q Consensus 272 ~~~~ir~~~~~d~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~v~~-~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~ 349 (435)
..+.+|+++++|.+.+.++......... ..........+...++++. .+++++|++.+..... ..+.+..++|+|+
T Consensus 4 ~~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~iiG~~~~~~~~~--~~~~i~~l~V~p~ 81 (169)
T PRK07922 4 GAITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVMWE--DLAEIRTVAVDPA 81 (169)
T ss_pred CCceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhhcCcEEEEEecCCcEEEEEEEeecCC--CceEEEEEEECHH
Confidence 4578999999999999999866443211 1212223333444567887 8999999987765433 3467889999999
Q ss_pred cccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 350 YRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 350 ~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
|||+|+|++|++++++++++.| +.++.+.+. +.+||+|+||+.++.
T Consensus 82 ~rgkGiG~~Ll~~~~~~a~~~g-~~~l~~~~~-----~~~fY~k~GF~~~~~ 127 (169)
T PRK07922 82 ARGRGVGHAIVERLLDVARELG-LSRVFVLTF-----EVEFFARHGFVEIDG 127 (169)
T ss_pred HhCCCHHHHHHHHHHHHHHHcC-CCEEEEEec-----cHHHHHHCCCEECcc
Confidence 9999999999999999999998 999887664 368999999999864
No 64
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.48 E-value=7.6e-13 Score=126.83 Aligned_cols=125 Identities=16% Similarity=0.174 Sum_probs=104.5
Q ss_pred CCCceEEeeCCcccHHHHHHHhHhc--CC---ccccHHHHHHHHhcCCeEEEEE--E---CCeEEEEEEEEeecCCCCeE
Q psy17026 100 DRPKIELGDVTPHNIKQLKRLNTVV--FP---VSYNEKFYKDVLEAGELAKLAY--Y---NDIVIGAVCCRIDPNNGRKL 169 (435)
Q Consensus 100 ~~~~i~ir~~~~~d~~~l~~l~~~~--~~---~~~~~~~~~~~l~~~~~~~v~~--~---~g~iVG~~~~~~~~~~~~~~ 169 (435)
..+.++||+++++|++.+.+|...+ |. ..|+...+...+..+ ..+++. + ++.+||++.+.... ..+
T Consensus 183 l~m~~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~-~~~~~~~~d~~gd~givG~~~~~~~~---~~~ 258 (320)
T TIGR01686 183 LELSLNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKE-EIVTVSMSDRFGDSGIIGIFVFEKKE---GNL 258 (320)
T ss_pred CCCEEEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCC-CEEEEEEEecCCCCceEEEEEEEecC---CcE
Confidence 3456899999999999999998777 43 567888888888765 344333 2 56899999886654 347
Q ss_pred EEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEE--cCCHHHHHHHHhCCCEEE
Q psy17026 170 YIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQ--LNNDVAIDFYKKFGFEIV 229 (435)
Q Consensus 170 ~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~--~~N~~a~~~y~k~GF~~~ 229 (435)
+|..++|+|.+||+|+|+.|++++++.|++.| +..+.+.+. ..|.+|++||+++||+..
T Consensus 259 ~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G-~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 259 FIDDLCMSCRALGRGVETRMLRWLFEQALDLG-NHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred EEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcC-CCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 89999999999999999999999999999999 999999886 479999999999999853
No 65
>PRK10562 putative acetyltransferase; Provisional
Probab=99.48 E-value=1.8e-12 Score=109.75 Aligned_cols=129 Identities=17% Similarity=0.296 Sum_probs=94.6
Q ss_pred EeeCCcccHHHHHHHhHhcC--CccccHH--------HHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEE
Q psy17026 106 LGDVTPHNIKQLKRLNTVVF--PVSYNEK--------FYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLG 175 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~~--~~~~~~~--------~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~ 175 (435)
||+++++|++.+.++..... +.++... ............+++..+|++||++.+... ..+..++
T Consensus 2 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~iG~~~~~~~------~~i~~~~ 75 (145)
T PRK10562 2 IREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYLPAAQTWVWEEDGKLLGFVSVLEG------RFVGALF 75 (145)
T ss_pred cccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhcCcccEEEEEECCEEEEEEEEeec------cEEEEEE
Confidence 68999999999999966542 2332211 111222233456777889999999987532 2578899
Q ss_pred eCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEe
Q psy17026 176 CLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQK 249 (435)
Q Consensus 176 V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~ 249 (435)
|+|+|||+|+|+.|++++++. +..+.+.+...|..|++||+|+||+..+. .++. ..+.+.++|.-
T Consensus 76 v~~~~rg~G~g~~ll~~~~~~------~~~~~~~v~~~N~~s~~~y~k~Gf~~~~~--~~~~-~~~~~~~~~~~ 140 (145)
T PRK10562 76 VAPKAVRRGIGKALMQHVQQR------YPHLSLEVYQKNQRAVNFYHAQGFRIVDS--AWQE-ETQHPTWIMSW 140 (145)
T ss_pred ECHHHcCCCHHHHHHHHHHhh------CCeEEEEEEcCChHHHHHHHHCCCEEccc--cccC-CCCCEEEEEEe
Confidence 999999999999999988763 45688899999999999999999999885 2333 33566776654
No 66
>PRK09831 putative acyltransferase; Provisional
Probab=99.47 E-value=6.5e-13 Score=112.67 Aligned_cols=128 Identities=20% Similarity=0.305 Sum_probs=93.6
Q ss_pred EEeeCCcccHHHHHHHhHhcCC----ccccHHHHH-----------HHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeE
Q psy17026 105 ELGDVTPHNIKQLKRLNTVVFP----VSYNEKFYK-----------DVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKL 169 (435)
Q Consensus 105 ~ir~~~~~d~~~l~~l~~~~~~----~~~~~~~~~-----------~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~ 169 (435)
.||+++++|++.+.++....+. ..++++... ..+. ...++++..+|++||++.+.. .
T Consensus 2 ~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~iiG~~~~~~-------~ 73 (147)
T PRK09831 2 QIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLA-KSQVRVAVINAQPVGFITCIE-------H 73 (147)
T ss_pred ccccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHh-cCceEEEEECCEEEEEEEehh-------c
Confidence 5799999999999999665542 223332221 2222 345778889999999987742 3
Q ss_pred EEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEe
Q psy17026 170 YIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQK 249 (435)
Q Consensus 170 ~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~ 249 (435)
++..++|+|++||+|+|++|++++++.+.. +.+.. |..+++||+|+||+..+..+.-.. +...+.+.|.+
T Consensus 74 ~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~--------l~v~~-~~~a~~~Y~k~Gf~~~g~~~~~~~-g~~~~~~~m~~ 143 (147)
T PRK09831 74 YIDMLFVDPEYTRRGVASALLKPLIKSESE--------LTVDA-SITAKPFFERYGFQTVKQQRVECR-GEWFINFYMRY 143 (147)
T ss_pred eeeeEEECHHHcCCCHHHHHHHHHHHHhhh--------eEeec-chhhHHHHHHCCCEEeeccceEEC-CEEEEeeEEEe
Confidence 588999999999999999999999998754 23333 568999999999999998763333 44566777765
Q ss_pred e
Q psy17026 250 T 250 (435)
Q Consensus 250 ~ 250 (435)
.
T Consensus 144 ~ 144 (147)
T PRK09831 144 K 144 (147)
T ss_pred c
Confidence 3
No 67
>PHA00673 acetyltransferase domain containing protein
Probab=99.44 E-value=2.6e-12 Score=107.15 Aligned_cols=126 Identities=10% Similarity=0.100 Sum_probs=97.6
Q ss_pred cCCchhHHHHHHHhHhhC-CC----CCCH----HHHHHHHh-cCceEEEEEeCCEEEEEEEEEecCCCC----CeEEEEE
Q psy17026 278 DVTPHNIKQLKRLNTVVF-PV----SYNE----KFYKDVLE-AGELAKLAYYNDIVIGAVCCRIDPNNG----RKLYIMT 343 (435)
Q Consensus 278 ~~~~~d~~~~~~l~~~~~-~~----~~~~----~~~~~~~~-~~~~~~v~~~~~~ivG~~~~~~~~~~~----~~~~i~~ 343 (435)
-++.+|++.+.+|..+.- +. .... ..+..... .+..++++.++|++||++.+...+... ..+.|..
T Consensus 11 ~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~~af~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~ 90 (154)
T PHA00673 11 FAELADAPTFASLCAEYAHESANADLAGRAPDHHAYAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPHFKGQLIGTTES 90 (154)
T ss_pred hccHhhHHHHHHHHHhcccccccccccccchhHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCccCCccEEEEEE
Confidence 457899999999975521 00 0011 12444444 455667888899999999988777443 6679999
Q ss_pred EEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccc
Q psy17026 344 LGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYK 407 (435)
Q Consensus 344 i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~ 407 (435)
+.|+|++||+|+|++|++++++++++.| +..+++...++. ....||.+.|++..++ .+|.
T Consensus 91 l~V~~~~RGqGIG~~Ll~~A~~~Ar~~G-c~~lyis~~p~~-~tv~fy~~~g~~~~~~--~~~~ 150 (154)
T PHA00673 91 IFVAAAHRPGGAGMALLRATEALARDLG-ATGLYVSGPTEG-RLVQLLPAAGYRETNR--TFYR 150 (154)
T ss_pred EEEChhccCCCHHHHHHHHHHHHHHHCC-CCEEEEecCCCc-cchHHHHhCCchhhch--hhhh
Confidence 9999999999999999999999999999 999999887654 6999999999998764 5554
No 68
>PRK10514 putative acetyltransferase; Provisional
Probab=99.44 E-value=3.6e-12 Score=107.72 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=92.1
Q ss_pred EEEEcCCchhHHHHHHHhHhhCC------CCCCHHHHHHHHh---cCceEEEEE-eCCEEEEEEEEEecCCCCCeEEEEE
Q psy17026 274 IELGDVTPHNIKQLKRLNTVVFP------VSYNEKFYKDVLE---AGELAKLAY-YNDIVIGAVCCRIDPNNGRKLYIMT 343 (435)
Q Consensus 274 ~~ir~~~~~d~~~~~~l~~~~~~------~~~~~~~~~~~~~---~~~~~~v~~-~~~~ivG~~~~~~~~~~~~~~~i~~ 343 (435)
+.||+++++|++.+.++....+. .++....+...+. ....++++. .++++||++.+.. .++..
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~-------~~~~~ 74 (145)
T PRK10514 2 ISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVDERDQPVGFMLLSG-------GHMEA 74 (145)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEecCCcEEEEEEEec-------CcEeE
Confidence 46899999999999998865321 1222222222221 233445554 5889999987632 24668
Q ss_pred EEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccccccccceeeee
Q psy17026 344 LGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQ 418 (435)
Q Consensus 344 i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~~~~m~ 418 (435)
++|+|+|||+|+|++|++.+++.+ ..+.+.+...|..+++||+|+||+.+++...-.. +.+.+.+.|.
T Consensus 75 ~~v~p~~rgkGig~~Ll~~~~~~~------~~i~~~v~~~N~~a~~~yek~Gf~~~~~~~~~~~-~~~~~~~~~~ 142 (145)
T PRK10514 75 LFVDPDVRGCGVGRMLVEHALSLH------PELTTDVNEQNEQAVGFYKKMGFKVTGRSEVDDQ-GRPYPLLHLA 142 (145)
T ss_pred EEECHHhccCCHHHHHHHHHHHhc------cccEEEeecCCHHHHHHHHHCCCEEecccccCCC-CCccceEEEE
Confidence 999999999999999999999753 3477889999999999999999999987553322 2345555443
No 69
>PRK07757 acetyltransferase; Provisional
Probab=99.43 E-value=2.9e-12 Score=109.31 Aligned_cols=120 Identities=20% Similarity=0.269 Sum_probs=91.1
Q ss_pred EEEEcCCchhHHHHHHHhHhhCCCCCCH-HHHHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCccc
Q psy17026 274 IELGDVTPHNIKQLKRLNTVVFPVSYNE-KFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRR 352 (435)
Q Consensus 274 ~~ir~~~~~d~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rg 352 (435)
+.+++++++|++.+.++........+.. ............++++..+|++||++.+..... ...++..++|+|+|||
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~lvG~~~l~~~~~--~~~~i~~v~V~p~~rg 79 (152)
T PRK07757 2 MEIRKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALHILWE--DLAEIRSLAVSEDYRG 79 (152)
T ss_pred ceEeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhccCcEEEEEECCEEEEEEEEEeccC--CceEEEEEEECHHHcC
Confidence 5789999999999999976644322210 111222222335677788999999998876543 3467889999999999
Q ss_pred CChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 353 LGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 353 kGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
+|+|++|+..+++++.+.+ +..+.+.+. +.+||+|+||+..+.
T Consensus 80 ~Glg~~Ll~~l~~~a~~~g-~~~i~~~~~-----~~~~Y~k~GF~~~~~ 122 (152)
T PRK07757 80 QGIGRMLVEACLEEARELG-VKRVFALTY-----QPEFFEKLGFREVDK 122 (152)
T ss_pred CCHHHHHHHHHHHHHHhCC-CCeEEEEeC-----cHHHHHHCCCEEccc
Confidence 9999999999999999888 888766552 458999999999876
No 70
>PRK10314 putative acyltransferase; Provisional
Probab=99.43 E-value=1e-12 Score=111.95 Aligned_cols=122 Identities=19% Similarity=0.263 Sum_probs=92.2
Q ss_pred EEcCCchhHHHHHHHhHhhCCCCCCHHHHHHHH--h--cCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcc
Q psy17026 276 LGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVL--E--AGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYR 351 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~--~--~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~r 351 (435)
+..++.+++.++..+...+|-..+.-.. .+.- + .....+++..++++||++.+....+....++|..++|+|+||
T Consensus 9 ~~~l~~~~~~~~~~lR~~VF~~eq~~~~-~e~D~~d~~~~~~h~~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~r 87 (153)
T PRK10314 9 HSELSVSQLYALLQLRCAVFVVEQNCPY-QDIDGDDLTGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALR 87 (153)
T ss_pred hhhCCHHHHHHHHHHHHHHhhhhcCCCc-cccCCCCCCCCcEEEEEEECCEEEEEEEEecCCCCCCCEEEEEEEECHHHh
Confidence 3567778889999999988865433221 1111 1 124556778899999998887654332457899999999999
Q ss_pred cCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 352 RLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 352 gkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
|+|+|++|++.++++++...+...+.+++. ..+..||+|+||+.++.
T Consensus 88 G~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~---~~a~~fY~k~GF~~~g~ 134 (153)
T PRK10314 88 GEKVGQQLMSKTLESCTRHWPDKPVYLGAQ---AHLQNFYQSFGFIPVTE 134 (153)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCcEEEehH---HHHHHHHHHCCCEECCC
Confidence 999999999999999988633677777763 47889999999999885
No 71
>PRK10314 putative acyltransferase; Provisional
Probab=99.43 E-value=9.4e-13 Score=112.14 Aligned_cols=123 Identities=17% Similarity=0.204 Sum_probs=92.5
Q ss_pred EeeCCcccHHHHHHHhHhcCCccc--cHHHHHHH-HhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccC
Q psy17026 106 LGDVTPHNIKQLKRLNTVVFPVSY--NEKFYKDV-LEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRR 182 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~~~~~~--~~~~~~~~-l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg 182 (435)
+..++.+++.++..+...+|-.+. +...+... ..+....+++.+++++||++.+.........++|..++|+|+|||
T Consensus 9 ~~~l~~~~~~~~~~lR~~VF~~eq~~~~~e~D~~d~~~~~~h~~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG 88 (153)
T PRK10314 9 HSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDLTGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRG 88 (153)
T ss_pred hhhCCHHHHHHHHHHHHHHhhhhcCCCccccCCCCCCCCcEEEEEEECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhC
Confidence 367888889999999888885332 21111111 011245667888999999999876543333578999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 183 LGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 183 ~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
+|+|++|++++++.++...+...+.+.+ +..+.+||+|+||+..+.
T Consensus 89 ~GiG~~Lm~~~~~~~~~~~~~~~i~L~a---~~~a~~fY~k~GF~~~g~ 134 (153)
T PRK10314 89 EKVGQQLMSKTLESCTRHWPDKPVYLGA---QAHLQNFYQSFGFIPVTE 134 (153)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCcEEEeh---HHHHHHHHHHCCCEECCC
Confidence 9999999999999998863377788776 447899999999998875
No 72
>PHA01807 hypothetical protein
Probab=99.42 E-value=3.4e-12 Score=107.82 Aligned_cols=115 Identities=12% Similarity=0.142 Sum_probs=85.7
Q ss_pred CCcccHHHHHHHhHhcC---Ccc--cc--HH---HHHH-HHhcCCeEEEEEECCeEEEEEEEEeecCCC--CeEEEEEEE
Q psy17026 109 VTPHNIKQLKRLNTVVF---PVS--YN--EK---FYKD-VLEAGELAKLAYYNDIVIGAVCCRIDPNNG--RKLYIMTLG 175 (435)
Q Consensus 109 ~~~~d~~~l~~l~~~~~---~~~--~~--~~---~~~~-~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~--~~~~i~~l~ 175 (435)
++.+|+..+..|....+ |.. |. ++ .+.. ..+.....++++++|++||++.+....... ....+..++
T Consensus 9 ~~~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~lY 88 (153)
T PHA01807 9 AKAGTPSELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQY 88 (153)
T ss_pred hhhCCHHHHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEEECCEEEEEEEEEcCCCcceeeeccceeEE
Confidence 45678888887765543 432 43 22 2222 223344567888999999999887655321 112234579
Q ss_pred eCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhC
Q psy17026 176 CLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKF 224 (435)
Q Consensus 176 V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~ 224 (435)
|+|+|||+|+|++|++++++.|++.| +..+.+.|..+|.+|++||++.
T Consensus 89 V~pe~RG~GiG~~Ll~~~~~~Ar~~G-~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 89 VLPEYRNAGVAREFLRELIRLAGEGN-LPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEEecCCcHHHHHHHHhc
Confidence 99999999999999999999999999 9999999999999999999974
No 73
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.42 E-value=6.6e-12 Score=101.85 Aligned_cols=86 Identities=27% Similarity=0.405 Sum_probs=69.1
Q ss_pred CHHHHHHHHhcC-ceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEE
Q psy17026 300 NEKFYKDVLEAG-ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYL 378 (435)
Q Consensus 300 ~~~~~~~~~~~~-~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l 378 (435)
....+...+..+ ..++++..++++|||+.+. . . ..|..++|+|+|||+|+|++|+..+++++++ + +..+.+
T Consensus 31 ~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~--~-~---~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~-~~~l~~ 102 (117)
T PF13673_consen 31 SPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE--P-D---GEISHLYVLPEYRGRGIGRALLDAAEKEAKD-G-IRRLTV 102 (117)
T ss_dssp SHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE--T-C---EEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-T-CEEEEE
T ss_pred CHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc--C-C---CeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-C-CcEEEE
Confidence 445556666654 5788999999999999876 2 1 3488999999999999999999999999966 7 777766
Q ss_pred EEEcCCHHHHHHHHhcCc
Q psy17026 379 HVQLNNDVAIDFYKKFGF 396 (435)
Q Consensus 379 ~v~~~N~~a~~~y~k~GF 396 (435)
. .|..+.+||+++||
T Consensus 103 ~---~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 103 E---ANERARRFYRKLGF 117 (117)
T ss_dssp E---C-HHHHHHHHHTT-
T ss_pred E---eCHHHHHHHHhCCC
Confidence 6 78899999999998
No 74
>PRK09831 putative acyltransferase; Provisional
Probab=99.42 E-value=1.1e-12 Score=111.19 Aligned_cols=128 Identities=20% Similarity=0.337 Sum_probs=93.2
Q ss_pred EEEcCCchhHHHHHHHhHhhCCC----CCCHHH-----------HHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeE
Q psy17026 275 ELGDVTPHNIKQLKRLNTVVFPV----SYNEKF-----------YKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKL 339 (435)
Q Consensus 275 ~ir~~~~~d~~~~~~l~~~~~~~----~~~~~~-----------~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~ 339 (435)
.||+++++|++.+.++....+.. .++.+. +...+. ...++++..+|+++|++.+.. .
T Consensus 2 ~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~iiG~~~~~~-------~ 73 (147)
T PRK09831 2 QIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLA-KSQVRVAVINAQPVGFITCIE-------H 73 (147)
T ss_pred ccccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHh-cCceEEEEECCEEEEEEEehh-------c
Confidence 57999999999999997654321 222221 122222 345778888999999987642 3
Q ss_pred EEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccccccccceeeeee
Q psy17026 340 YIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQK 419 (435)
Q Consensus 340 ~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~~~~m~~ 419 (435)
++..++|+|++||+|+|++|++++++.++. + .+.. |..+++||+|+||+.+++.+.-. ++...+.+.|.|
T Consensus 74 ~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~------l--~v~~-~~~a~~~Y~k~Gf~~~g~~~~~~-~g~~~~~~~m~~ 143 (147)
T PRK09831 74 YIDMLFVDPEYTRRGVASALLKPLIKSESE------L--TVDA-SITAKPFFERYGFQTVKQQRVEC-RGEWFINFYMRY 143 (147)
T ss_pred eeeeEEECHHHcCCCHHHHHHHHHHHHhhh------e--Eeec-chhhHHHHHHCCCEEeeccceEE-CCEEEEeeEEEe
Confidence 678899999999999999999999998754 2 3333 46899999999999999865323 355777777776
Q ss_pred c
Q psy17026 420 T 420 (435)
Q Consensus 420 ~ 420 (435)
.
T Consensus 144 ~ 144 (147)
T PRK09831 144 K 144 (147)
T ss_pred c
Confidence 4
No 75
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.42 E-value=1.9e-12 Score=106.19 Aligned_cols=117 Identities=15% Similarity=0.201 Sum_probs=94.3
Q ss_pred EEeeCCcccHHHHHHHhHhcCCcc----ccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCc
Q psy17026 105 ELGDVTPHNIKQLKRLNTVVFPVS----YNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPY 180 (435)
Q Consensus 105 ~ir~~~~~d~~~l~~l~~~~~~~~----~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~ 180 (435)
.||.++.+|++.|.+|........ -+.+.+.. .-..+++++.+|.+||++.+...... +.+.+..++|+|++
T Consensus 2 ~iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~---~i~dF~i~E~~g~viGC~aL~~~~~~-~~gE~~~laV~pd~ 77 (153)
T COG1246 2 QIRKARISDIPAILELIRPLELQGILLRRSREQLEE---EIDDFTIIERDGKVIGCAALHPVLEE-DLGELRSLAVHPDY 77 (153)
T ss_pred ceeeccccchHHHHHHHHHHhhccccchhhHHHHHH---HHhhheeeeeCCcEEEEEeecccCcc-CeeeEEEEEECHHh
Confidence 579999999999999987765432 12222222 22347889999999999999853222 46899999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 181 RRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 181 rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
||+|+|..|+++++..|++.| ++++++.+. .+..||+++||+...
T Consensus 78 r~~G~G~~Ll~~~~~~Ar~~g-i~~lf~LTt----~~~~~F~~~GF~~vd 122 (153)
T COG1246 78 RGSGRGERLLERLLADARELG-IKELFVLTT----RSPEFFAERGFTRVD 122 (153)
T ss_pred cCCCcHHHHHHHHHHHHHHcC-Cceeeeeec----ccHHHHHHcCCeECc
Confidence 999999999999999999999 999999875 468999999999765
No 76
>PRK10562 putative acetyltransferase; Provisional
Probab=99.40 E-value=1.2e-11 Score=104.59 Aligned_cols=129 Identities=17% Similarity=0.312 Sum_probs=93.5
Q ss_pred EEcCCchhHHHHHHHhHhhC--CCCCCHH-H-------HHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEE
Q psy17026 276 LGDVTPHNIKQLKRLNTVVF--PVSYNEK-F-------YKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLG 345 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~--~~~~~~~-~-------~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~ 345 (435)
||+++.+|++.+.++..... ..++... . ..+........+++..++++||++.+... ..+..++
T Consensus 2 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~iG~~~~~~~------~~i~~~~ 75 (145)
T PRK10562 2 IREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYLPAAQTWVWEEDGKLLGFVSVLEG------RFVGALF 75 (145)
T ss_pred cccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhcCcccEEEEEECCEEEEEEEEeec------cEEEEEE
Confidence 68999999999999875532 2222211 1 11222234456777888999999877432 2577899
Q ss_pred ECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccccccccceeeeee
Q psy17026 346 CLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQK 419 (435)
Q Consensus 346 V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~~~~m~~ 419 (435)
|+|+|||+|+|+.|++.+++. +..+.+.+...|..+++||+|+||+.++. .++++ .+.+...|+.
T Consensus 76 v~~~~rg~G~g~~ll~~~~~~------~~~~~~~v~~~N~~s~~~y~k~Gf~~~~~--~~~~~-~~~~~~~~~~ 140 (145)
T PRK10562 76 VAPKAVRRGIGKALMQHVQQR------YPHLSLEVYQKNQRAVNFYHAQGFRIVDS--AWQEE-TQHPTWIMSW 140 (145)
T ss_pred ECHHHcCCCHHHHHHHHHHhh------CCeEEEEEEcCChHHHHHHHHCCCEEccc--cccCC-CCCEEEEEEe
Confidence 999999999999999988773 45688889999999999999999999985 55553 3455555543
No 77
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.40 E-value=6.6e-12 Score=120.37 Aligned_cols=122 Identities=16% Similarity=0.201 Sum_probs=101.7
Q ss_pred cEEEEcCCchhHHHHHHHhHhh--CC---CCCCHHHHHHHHhcCceEEEEEe-----CCEEEEEEEEEecCCCCCeEEEE
Q psy17026 273 KIELGDVTPHNIKQLKRLNTVV--FP---VSYNEKFYKDVLEAGELAKLAYY-----NDIVIGAVCCRIDPNNGRKLYIM 342 (435)
Q Consensus 273 ~~~ir~~~~~d~~~~~~l~~~~--~~---~~~~~~~~~~~~~~~~~~~v~~~-----~~~ivG~~~~~~~~~~~~~~~i~ 342 (435)
.++|+++++.|++.+.+|.... |. ..|+...+...+..+ ..+++.. ++.+||++.+.... ...+|.
T Consensus 186 ~~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~-~~~~~~~~d~~gd~givG~~~~~~~~---~~~~I~ 261 (320)
T TIGR01686 186 SLNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKE-EIVTVSMSDRFGDSGIIGIFVFEKKE---GNLFID 261 (320)
T ss_pred EEEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCC-CEEEEEEEecCCCCceEEEEEEEecC---CcEEEE
Confidence 4789999999999999998776 43 457777788777665 4444432 56799999876554 447899
Q ss_pred EEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEE--cCCHHHHHHHHhcCcEEE
Q psy17026 343 TLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQ--LNNDVAIDFYKKFGFEIV 399 (435)
Q Consensus 343 ~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~--~~N~~a~~~y~k~GF~~~ 399 (435)
.++|+|++||+|+|+.||+++++.+++.| +..+.+.+. ..|.+|+.||+++||+.+
T Consensus 262 ~l~vs~r~~grGig~~Ll~~l~~~a~~~G-~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 262 DLCMSCRALGRGVETRMLRWLFEQALDLG-NHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred EEEEcHhHhcCcHHHHHHHHHHHHHHHcC-CCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 99999999999999999999999999999 999999885 479999999999999854
No 78
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.39 E-value=4.2e-12 Score=126.54 Aligned_cols=121 Identities=14% Similarity=0.170 Sum_probs=93.4
Q ss_pred EEEcCCchhHHHHHHHhHhhCCCCCCHHHHHHHHh-cCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccC
Q psy17026 275 ELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLE-AGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRL 353 (435)
Q Consensus 275 ~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgk 353 (435)
.+|+++++|++.+.++........|........+. ....++++..+++++|++.+....+. ..+++..++|+|+|||+
T Consensus 284 ~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~V~~~dg~iVG~~~~~~~~~~-~~~~I~~l~V~p~~Rg~ 362 (429)
T TIGR01890 284 SIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEHDGNIIGCAALYPYAEE-DCGEMACLAVSPEYQDG 362 (429)
T ss_pred heEECCHHHHHHHHHHHHHHHHcCCchhhhHHHHHhhcCcEEEEEECCEEEEEEEEEecCCC-CeEEEEEEEECHHHcCC
Confidence 58999999999999997654433333222222222 23346677789999999988776443 56789999999999999
Q ss_pred ChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 354 GIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 354 Glg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
|+|++|+++++++++++| +..+.+. ..| +.+||+++||+.++.
T Consensus 363 GiG~~Ll~~l~~~A~~~G-~~~l~v~--~~~--a~~fY~k~GF~~~g~ 405 (429)
T TIGR01890 363 GRGERLLAHIEDRARQMG-ISRLFVL--TTR--TGHWFRERGFQTASV 405 (429)
T ss_pred CHHHHHHHHHHHHHHHcC-CCEEEEe--ecc--hHHHHHHCCCEECCh
Confidence 999999999999999999 8877544 334 579999999999987
No 79
>PLN02825 amino-acid N-acetyltransferase
Probab=99.38 E-value=3.5e-12 Score=127.31 Aligned_cols=118 Identities=10% Similarity=0.095 Sum_probs=95.9
Q ss_pred EEeeCCcccHHHHHHHhHhcCCc----cccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCc
Q psy17026 105 ELGDVTPHNIKQLKRLNTVVFPV----SYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPY 180 (435)
Q Consensus 105 ~ir~~~~~d~~~l~~l~~~~~~~----~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~ 180 (435)
.||+++++|++.+.+|....... .++.+.+.. ....+++++.+|++|||+.+...... ..+++..++|+|+|
T Consensus 369 ~IR~At~eDi~~I~~Li~~lee~g~lv~rs~e~le~---ei~~f~V~e~Dg~IVG~aal~~~~~~-~~aEI~~laV~P~y 444 (515)
T PLN02825 369 GTRMARVEDLAGIRQIIRPLEESGILVRRTDEELLR---ALDSFVVVEREGSIIACAALFPFFEE-KCGEVAAIAVSPEC 444 (515)
T ss_pred hheeCCHHHHHHHHHHHHHHHHcCCCcCCCHHHHHh---cCCcEEEEEECCEEEEEEEEEeecCC-CcEEEEEEEECHHH
Confidence 58999999999999998665322 233333332 33467889999999999988765432 45789999999999
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 181 RRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 181 rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
||+|+|++|++++++.|+++| +.++++.+. .+.+||+++||+..+.
T Consensus 445 RGkGiG~~LL~~le~~Ar~~G-~~~L~Lltt----~a~~fY~k~GF~~~~~ 490 (515)
T PLN02825 445 RGQGQGDKLLDYIEKKAASLG-LEKLFLLTT----RTADWFVRRGFSECSI 490 (515)
T ss_pred cCCCHHHHHHHHHHHHHHHCC-CCEEEEEeC----cHHHHHHHCCCEEeCh
Confidence 999999999999999999999 999999772 4789999999998774
No 80
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.38 E-value=5.7e-12 Score=94.70 Aligned_cols=78 Identities=32% Similarity=0.446 Sum_probs=65.0
Q ss_pred CceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHH
Q psy17026 311 GELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDF 390 (435)
Q Consensus 311 ~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~ 390 (435)
...++++.+++++||++.+....+ ..+|..++|+|++||+|+|+.|++.+++.+.. ..+.+.+ |..+..|
T Consensus 2 ~~~~~~~~~~~~ivG~~~~~~~~~---~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~----~~i~l~~---~~~~~~f 71 (79)
T PF13508_consen 2 KERFFVAEDDGEIVGFIRLWPNED---FAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS----KKIFLFT---NPAAIKF 71 (79)
T ss_dssp TEEEEEEEETTEEEEEEEEEETTT---EEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC----SEEEEEE---EHHHHHH
T ss_pred ccEEEEEEECCEEEEEEEEEEcCC---EEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC----CcEEEEE---cHHHHHH
Confidence 356788999999999998866663 57999999999999999999999999988844 3466665 4589999
Q ss_pred HHhcCcEE
Q psy17026 391 YKKFGFEI 398 (435)
Q Consensus 391 y~k~GF~~ 398 (435)
|+++||++
T Consensus 72 Y~~~GF~~ 79 (79)
T PF13508_consen 72 YEKLGFEE 79 (79)
T ss_dssp HHHTTEEE
T ss_pred HHHCcCCC
Confidence 99999985
No 81
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.38 E-value=4.9e-12 Score=126.05 Aligned_cols=122 Identities=14% Similarity=0.161 Sum_probs=93.5
Q ss_pred eEEeeCCcccHHHHHHHhHhcCCccccHHHHHHHHh-cCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccC
Q psy17026 104 IELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLE-AGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRR 182 (435)
Q Consensus 104 i~ir~~~~~d~~~l~~l~~~~~~~~~~~~~~~~~l~-~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg 182 (435)
+.||+++++|++.+..+........+........+. ....+++++.+|++||++.+...... ..+++..++|+|+|||
T Consensus 283 ~~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~V~~~dg~iVG~~~~~~~~~~-~~~~I~~l~V~p~~Rg 361 (429)
T TIGR01890 283 ESIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEHDGNIIGCAALYPYAEE-DCGEMACLAVSPEYQD 361 (429)
T ss_pred hheEECCHHHHHHHHHHHHHHHHcCCchhhhHHHHHhhcCcEEEEEECCEEEEEEEEEecCCC-CeEEEEEEEECHHHcC
Confidence 479999999999999997544333332222222222 22346778889999999998776432 3578999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 183 LGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 183 ~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
+|+|++|+++++++|+++| +..+++. ..| +.+||+++||+..++
T Consensus 362 ~GiG~~Ll~~l~~~A~~~G-~~~l~v~--~~~--a~~fY~k~GF~~~g~ 405 (429)
T TIGR01890 362 GGRGERLLAHIEDRARQMG-ISRLFVL--TTR--TGHWFRERGFQTASV 405 (429)
T ss_pred CCHHHHHHHHHHHHHHHcC-CCEEEEe--ecc--hHHHHHHCCCEECCh
Confidence 9999999999999999999 8887654 334 579999999999886
No 82
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.38 E-value=4.3e-12 Score=127.07 Aligned_cols=119 Identities=15% Similarity=0.213 Sum_probs=93.5
Q ss_pred EEEEcCCchhHHHHHHHhHhh----CCCCCCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCC
Q psy17026 274 IELGDVTPHNIKQLKRLNTVV----FPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSP 349 (435)
Q Consensus 274 ~~ir~~~~~d~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~ 349 (435)
+.||+++++|++.+.++.... +...|....+.. ....++++..+++++|++.+...... ..+++..++|+|+
T Consensus 295 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~---~~~~~~va~~dg~iVG~~~~~~~~~~-~~~~I~~l~V~p~ 370 (441)
T PRK05279 295 EQLRRATIDDVGGILELIRPLEEQGILVRRSREQLER---EIDKFTVIERDGLIIGCAALYPFPEE-KMGEMACLAVHPD 370 (441)
T ss_pred HHeEeCCHHHHHHHHHHHHHHHHcCCccccCHHHHhc---ccCcEEEEEECCEEEEEEEEEEcCCC-CeEEEEEEEECHH
Confidence 468999999999999987543 222344433332 23356788889999999877765443 4578999999999
Q ss_pred cccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 350 YRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 350 ~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
|||+|+|++|+++++++++++| +..+.+.+ ..+.+||+++||+.++.
T Consensus 371 ~Rg~GiG~~Ll~~l~~~a~~~g-~~~l~l~~----~~a~~fY~k~GF~~~g~ 417 (441)
T PRK05279 371 YRGSGRGERLLKRIEQRARQLG-LKRLFVLT----TRTAHWFLERGFVPVDV 417 (441)
T ss_pred HcCCCHHHHHHHHHHHHHHHcC-CCEEEEec----chHHHHHHHCcCEECCh
Confidence 9999999999999999999998 88876543 35899999999999987
No 83
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.37 E-value=6.1e-12 Score=94.56 Aligned_cols=77 Identities=32% Similarity=0.457 Sum_probs=64.7
Q ss_pred CeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHH
Q psy17026 142 ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY 221 (435)
Q Consensus 142 ~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y 221 (435)
...+++.+++++||++.+..... ..++..++|+|++||+|+|+.|++++.+.+.. ..+++.+ |+.+.+||
T Consensus 3 ~~~~~~~~~~~ivG~~~~~~~~~---~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~----~~i~l~~---~~~~~~fY 72 (79)
T PF13508_consen 3 ERFFVAEDDGEIVGFIRLWPNED---FAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS----KKIFLFT---NPAAIKFY 72 (79)
T ss_dssp EEEEEEEETTEEEEEEEEEETTT---EEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC----SEEEEEE---EHHHHHHH
T ss_pred cEEEEEEECCEEEEEEEEEEcCC---EEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC----CcEEEEE---cHHHHHHH
Confidence 45788999999999999966654 57999999999999999999999999988854 3466655 56899999
Q ss_pred HhCCCEE
Q psy17026 222 KKFGFEI 228 (435)
Q Consensus 222 ~k~GF~~ 228 (435)
+++||++
T Consensus 73 ~~~GF~~ 79 (79)
T PF13508_consen 73 EKLGFEE 79 (79)
T ss_dssp HHTTEEE
T ss_pred HHCcCCC
Confidence 9999984
No 84
>KOG3396|consensus
Probab=99.36 E-value=1.2e-11 Score=97.81 Aligned_cols=124 Identities=17% Similarity=0.248 Sum_probs=95.3
Q ss_pred ceEEeeCCcccHHH-HHHHhHhcCC-ccccHHHHHH----HHhcCC-eE-EEEEE--CCeEEEEEEEEeecCCC----Ce
Q psy17026 103 KIELGDVTPHNIKQ-LKRLNTVVFP-VSYNEKFYKD----VLEAGE-LA-KLAYY--NDIVIGAVCCRIDPNNG----RK 168 (435)
Q Consensus 103 ~i~ir~~~~~d~~~-l~~l~~~~~~-~~~~~~~~~~----~l~~~~-~~-~v~~~--~g~iVG~~~~~~~~~~~----~~ 168 (435)
.+.+|++..+|... ..++..+.-. ...+++.|.. +-.... ++ .|+++ -+++||.+.+.+..... ..
T Consensus 6 ~~~lR~L~~~D~~kGf~elL~qLT~vG~vt~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g~r 85 (150)
T KOG3396|consen 6 GFKLRPLEEDDYGKGFIELLKQLTSVGVVTREQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCGSR 85 (150)
T ss_pred ceEEeecccccccchHHHHHHHHhhccccCHHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhhhccccc
Confidence 47899999999885 5555444221 2233443333 333444 33 35555 57899999998877654 56
Q ss_pred EEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 169 LYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 169 ~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
++|+++.|++++||+++|+.|+..+...++..| +.++.|.+.+.| +.||+|+||...+
T Consensus 86 GhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lg-cYKi~LdC~~~n---v~FYeKcG~s~~~ 143 (150)
T KOG3396|consen 86 GHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLG-CYKIILDCDPKN---VKFYEKCGYSNAG 143 (150)
T ss_pred CceeEEEeChhhhhhHHhHHHHHHHHHHHHhcC-cEEEEEecchhh---hhHHHHcCccccc
Confidence 889999999999999999999999999999999 999999999977 7999999998654
No 85
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.36 E-value=6.1e-12 Score=125.98 Aligned_cols=119 Identities=15% Similarity=0.213 Sum_probs=94.1
Q ss_pred eEEeeCCcccHHHHHHHhHhc----CCccccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCC
Q psy17026 104 IELGDVTPHNIKQLKRLNTVV----FPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSP 179 (435)
Q Consensus 104 i~ir~~~~~d~~~l~~l~~~~----~~~~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~ 179 (435)
+.||+++++|++.+.++.... +..+++.+.+.. ....++++++++++||++.+...... ..+++..++|+|+
T Consensus 295 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~---~~~~~~va~~dg~iVG~~~~~~~~~~-~~~~I~~l~V~p~ 370 (441)
T PRK05279 295 EQLRRATIDDVGGILELIRPLEEQGILVRRSREQLER---EIDKFTVIERDGLIIGCAALYPFPEE-KMGEMACLAVHPD 370 (441)
T ss_pred HHeEeCCHHHHHHHHHHHHHHHHcCCccccCHHHHhc---ccCcEEEEEECCEEEEEEEEEEcCCC-CeEEEEEEEECHH
Confidence 578999999999999986532 223344433322 22357788899999999987765432 3578999999999
Q ss_pred ccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 180 YRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 180 ~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
|||+|+|++|++++++++++.| +..+++.. ..+++||+++||+..+.
T Consensus 371 ~Rg~GiG~~Ll~~l~~~a~~~g-~~~l~l~~----~~a~~fY~k~GF~~~g~ 417 (441)
T PRK05279 371 YRGSGRGERLLKRIEQRARQLG-LKRLFVLT----TRTAHWFLERGFVPVDV 417 (441)
T ss_pred HcCCCHHHHHHHHHHHHHHHcC-CCEEEEec----chHHHHHHHCcCEECCh
Confidence 9999999999999999999999 88887643 36899999999999886
No 86
>PLN02825 amino-acid N-acetyltransferase
Probab=99.36 E-value=7.4e-12 Score=124.98 Aligned_cols=118 Identities=9% Similarity=0.089 Sum_probs=96.2
Q ss_pred EEEcCCchhHHHHHHHhHhhCCC----CCCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCc
Q psy17026 275 ELGDVTPHNIKQLKRLNTVVFPV----SYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPY 350 (435)
Q Consensus 275 ~ir~~~~~d~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~ 350 (435)
.||+++.+|++.+.++....... .++.+.+... ...++++..+|++||++.+...... ..+++..++|+|+|
T Consensus 369 ~IR~At~eDi~~I~~Li~~lee~g~lv~rs~e~le~e---i~~f~V~e~Dg~IVG~aal~~~~~~-~~aEI~~laV~P~y 444 (515)
T PLN02825 369 GTRMARVEDLAGIRQIIRPLEESGILVRRTDEELLRA---LDSFVVVEREGSIIACAALFPFFEE-KCGEVAAIAVSPEC 444 (515)
T ss_pred hheeCCHHHHHHHHHHHHHHHHcCCCcCCCHHHHHhc---CCcEEEEEECCEEEEEEEEEeecCC-CcEEEEEEEECHHH
Confidence 48999999999999998765432 2344444332 3457888899999999987766543 56789999999999
Q ss_pred ccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 351 RRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 351 rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
||+|+|++||++++++++++| ++++.+.+. .+.+||+++||+.++.
T Consensus 445 RGkGiG~~LL~~le~~Ar~~G-~~~L~Lltt----~a~~fY~k~GF~~~~~ 490 (515)
T PLN02825 445 RGQGQGDKLLDYIEKKAASLG-LEKLFLLTT----RTADWFVRRGFSECSI 490 (515)
T ss_pred cCCCHHHHHHHHHHHHHHHCC-CCEEEEEeC----cHHHHHHHCCCEEeCh
Confidence 999999999999999999999 999988773 4789999999999875
No 87
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.35 E-value=3.7e-11 Score=101.95 Aligned_cols=143 Identities=21% Similarity=0.225 Sum_probs=111.1
Q ss_pred CceEEeeCCcccHHHHHHHhHhcCCccccHHHHHHHHhc-----CCeEEEEEECCeEEEEEEEEeecCC---CCeEEEEE
Q psy17026 102 PKIELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLEA-----GELAKLAYYNDIVIGAVCCRIDPNN---GRKLYIMT 173 (435)
Q Consensus 102 ~~i~ir~~~~~d~~~l~~l~~~~~~~~~~~~~~~~~l~~-----~~~~~v~~~~g~iVG~~~~~~~~~~---~~~~~i~~ 173 (435)
+++.||..++.|++.+.++....|. +.......+.+.. ....+|+.++|++||.+.+..-.-. ....-+.-
T Consensus 2 ~~~~ir~e~~~d~~~i~~~~~~aF~-~~~e~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaP 80 (171)
T COG3153 2 MMMLIRTETPADIPAIEALTREAFG-PGREAKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAP 80 (171)
T ss_pred CccEEEecChhhHHHHHHHHHHHhh-cchHHHHHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEe
Confidence 4678999999999999999999997 4444444444432 2468899999999999987755433 25677889
Q ss_pred EEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeeccc
Q psy17026 174 LGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRN 253 (435)
Q Consensus 174 l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~ 253 (435)
++|+|++||+|||++|++..++.++..| +..+.+.-. -.+|.+.||+......-+.. ....+...|...|..
T Consensus 81 LaV~p~~qg~GIG~~Lvr~~le~a~~~G-~~~v~vlGd------p~YY~rfGF~~~~~~~l~~p-~~~~~~~fl~~~L~~ 152 (171)
T COG3153 81 LAVDPEYQGQGIGSALVREGLEALRLAG-ASAVVVLGD------PTYYSRFGFEPAAGAKLYAP-GPVPDERFLALELGD 152 (171)
T ss_pred EEEchhhcCCcHHHHHHHHHHHHHHHCC-CCEEEEecC------cccccccCcEEccccccccC-CCCCCceEEEEEccC
Confidence 9999999999999999999999999999 777776643 38999999998876544332 224567777777765
No 88
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.35 E-value=4.5e-11 Score=100.44 Aligned_cols=122 Identities=18% Similarity=0.193 Sum_probs=88.5
Q ss_pred eEEeeCCcccHHHHHHHhHhc----C---Ccc-ccHHHHHHHHh-------c-CCeEEEEEE--CCeEEEEEEEEeecCC
Q psy17026 104 IELGDVTPHNIKQLKRLNTVV----F---PVS-YNEKFYKDVLE-------A-GELAKLAYY--NDIVIGAVCCRIDPNN 165 (435)
Q Consensus 104 i~ir~~~~~d~~~l~~l~~~~----~---~~~-~~~~~~~~~l~-------~-~~~~~v~~~--~g~iVG~~~~~~~~~~ 165 (435)
+.||+++++|++.+.++.... + ..+ .+.......+. . +...+++.+ ++++||++.+......
T Consensus 2 l~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~~ 81 (142)
T PF13302_consen 2 LTLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDKN 81 (142)
T ss_dssp EEEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEETT
T ss_pred EEEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeecccC
Confidence 689999999999999987421 1 111 23333322222 1 133456665 3479999999555334
Q ss_pred CCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHH-hcCCccEEEEEEEcCCHHHHHHHHhCCCE
Q psy17026 166 GRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVE-KDGNFDSIYLHVQLNNDVAIDFYKKFGFE 227 (435)
Q Consensus 166 ~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~-~~g~~~~v~l~v~~~N~~a~~~y~k~GF~ 227 (435)
...+.++ +.|.|++||+|+|+.++..+++++. ..| +.++.+.+..+|.+|+++++|+||+
T Consensus 82 ~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~~-~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 82 NNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEELG-LHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp TTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTST-SSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred CCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcCC-cEEEEEEECcCCHHHHHHHHHcCCC
Confidence 3456655 8899999999999999999999996 556 9999999999999999999999996
No 89
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.35 E-value=1e-11 Score=101.98 Aligned_cols=118 Identities=15% Similarity=0.194 Sum_probs=95.6
Q ss_pred EEEcCCchhHHHHHHHhHhhCCCC----CCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCc
Q psy17026 275 ELGDVTPHNIKQLKRLNTVVFPVS----YNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPY 350 (435)
Q Consensus 275 ~ir~~~~~d~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~ 350 (435)
.||.++..|...+.++........ -+.+.+... -..++++..+|.++|++.+....+. ..+.+..++|+|++
T Consensus 2 ~iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~---i~dF~i~E~~g~viGC~aL~~~~~~-~~gE~~~laV~pd~ 77 (153)
T COG1246 2 QIRKARISDIPAILELIRPLELQGILLRRSREQLEEE---IDDFTIIERDGKVIGCAALHPVLEE-DLGELRSLAVHPDY 77 (153)
T ss_pred ceeeccccchHHHHHHHHHHhhccccchhhHHHHHHH---HhhheeeeeCCcEEEEEeecccCcc-CeeeEEEEEECHHh
Confidence 479999999999999987654321 223333333 3357788889999999988854443 67899999999999
Q ss_pred ccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 351 RRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 351 rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
||+|+|..|+..++..|++.| ++++++.+. .+..||+++||+.+..
T Consensus 78 r~~G~G~~Ll~~~~~~Ar~~g-i~~lf~LTt----~~~~~F~~~GF~~vd~ 123 (153)
T COG1246 78 RGSGRGERLLERLLADARELG-IKELFVLTT----RSPEFFAERGFTRVDK 123 (153)
T ss_pred cCCCcHHHHHHHHHHHHHHcC-Cceeeeeec----ccHHHHHHcCCeECcc
Confidence 999999999999999999999 999988775 3778999999999875
No 90
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.34 E-value=1.1e-11 Score=128.68 Aligned_cols=120 Identities=13% Similarity=0.165 Sum_probs=95.1
Q ss_pred CCceEEeeCCcccHHHHHHHhHhcCC----ccccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEe
Q psy17026 101 RPKIELGDVTPHNIKQLKRLNTVVFP----VSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGC 176 (435)
Q Consensus 101 ~~~i~ir~~~~~d~~~l~~l~~~~~~----~~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V 176 (435)
+..+.||+++++|++.+..+...... .+++... .......+++++++|++|||+.+..... ..++|..++|
T Consensus 461 ~~gm~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~---l~~~~~~~~Va~~~g~IVG~~~l~~~~~--~~~~I~~i~V 535 (614)
T PRK12308 461 TSGVKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNE---LVRDIGSFAVAEHHGEVTGCASLYIYDS--GLAEIRSLGV 535 (614)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHHHhhhcccccCHHH---HhcccCcEEEEEECCEEEEEEEEEEcCC--CeEEEEEEEE
Confidence 34578999999999999999765432 2222222 2233346778889999999998876543 2478999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 177 LSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 177 ~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
+|+|||+|||+.|++++++++++.| +..+.+.+ .+..||+|+||+..++
T Consensus 536 ~P~~rGkGIGk~Ll~~l~~~ak~~g-~~~i~l~~-----~a~~FYek~GF~~~~~ 584 (614)
T PRK12308 536 EAGWQVQGQGSALVQYLVEKARQMA-IKKVFVLT-----RVPEFFMKQGFSPTSK 584 (614)
T ss_pred CHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEee-----CcHHHHHHCCCEECCc
Confidence 9999999999999999999999999 99988765 3469999999998875
No 91
>PHA01807 hypothetical protein
Probab=99.32 E-value=3.2e-11 Score=101.85 Aligned_cols=114 Identities=11% Similarity=0.136 Sum_probs=82.9
Q ss_pred CCchhHHHHHHHhHhhC---CCC--CC--HHH---HHH-HHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEE---EEEE
Q psy17026 279 VTPHNIKQLKRLNTVVF---PVS--YN--EKF---YKD-VLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLY---IMTL 344 (435)
Q Consensus 279 ~~~~d~~~~~~l~~~~~---~~~--~~--~~~---~~~-~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~---i~~i 344 (435)
++.+|+..+..+....+ |.. |. .+. +.+ ..+.....++++.+|++||++.+...... .... +..+
T Consensus 9 ~~~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~dg~lvG~~~l~~~~~~-~~~~i~~l~~l 87 (153)
T PHA01807 9 AKAGTPSELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVFRDGKLAGIAVLVFEDDP-HVGPCLGVQWQ 87 (153)
T ss_pred hhhCCHHHHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEEECCEEEEEEEEEcCCCc-ceeeeccceeE
Confidence 34566777666654433 332 43 221 122 22234455777889999999988665533 2223 3447
Q ss_pred EECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhc
Q psy17026 345 GCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKF 394 (435)
Q Consensus 345 ~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~ 394 (435)
+|+|+|||+|+|+.||..+++++++.| +..+.+.|...|.+|++||++.
T Consensus 88 YV~pe~RG~GiG~~Ll~~~~~~Ar~~G-~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 88 YVLPEYRNAGVAREFLRELIRLAGEGN-LPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred EECHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEEecCCcHHHHHHHHhc
Confidence 999999999999999999999999999 9999999999999999999975
No 92
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.30 E-value=1.2e-10 Score=97.91 Aligned_cols=124 Identities=17% Similarity=0.192 Sum_probs=88.9
Q ss_pred cEEEEcCCchhHHHHHHHhHhh----C---CCC-CCHHHHHHHHh--------cCceEEEEEe--CCEEEEEEEEEecCC
Q psy17026 273 KIELGDVTPHNIKQLKRLNTVV----F---PVS-YNEKFYKDVLE--------AGELAKLAYY--NDIVIGAVCCRIDPN 334 (435)
Q Consensus 273 ~~~ir~~~~~d~~~~~~l~~~~----~---~~~-~~~~~~~~~~~--------~~~~~~v~~~--~~~ivG~~~~~~~~~ 334 (435)
++.|++++++|++.+.++.... + ... ++.....+.+. .+..++++.. ++++||++.+.....
T Consensus 1 Rl~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~ 80 (142)
T PF13302_consen 1 RLTLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDK 80 (142)
T ss_dssp SEEEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEET
T ss_pred CEEEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeeccc
Confidence 3689999999999999987421 1 111 23222222221 1234456655 357999998855433
Q ss_pred CCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcE
Q psy17026 335 NGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFE 397 (435)
Q Consensus 335 ~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~ 397 (435)
....+.+ ++.|.|+|||+|+|+.++..+++++++..++.++.+.+...|.+|+++++|+||+
T Consensus 81 ~~~~~ei-g~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 81 NNNWAEI-GYWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp TTTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred CCCcccc-ccchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHcCCC
Confidence 4366776 5999999999999999999999999755449999999999999999999999996
No 93
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.30 E-value=2.4e-11 Score=126.16 Aligned_cols=121 Identities=12% Similarity=0.164 Sum_probs=95.3
Q ss_pred CCcEEEEcCCchhHHHHHHHhHhhCCC----CCCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEE
Q psy17026 271 RPKIELGDVTPHNIKQLKRLNTVVFPV----SYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGC 346 (435)
Q Consensus 271 ~~~~~ir~~~~~d~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V 346 (435)
..++.||+++++|++.+.++...++.. ++.... .......++++..+|++|||+.+..... ..++|..++|
T Consensus 461 ~~gm~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~---l~~~~~~~~Va~~~g~IVG~~~l~~~~~--~~~~I~~i~V 535 (614)
T PRK12308 461 TSGVKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNE---LVRDIGSFAVAEHHGEVTGCASLYIYDS--GLAEIRSLGV 535 (614)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHHHhhhcccccCHHH---HhcccCcEEEEEECCEEEEEEEEEEcCC--CeEEEEEEEE
Confidence 456789999999999999997655322 222222 2233456778888999999998776432 3478999999
Q ss_pred CCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEe
Q psy17026 347 LSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETK 402 (435)
Q Consensus 347 ~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~ 402 (435)
+|+|||+|+|+.|++.+++++++.| +..+.+.+ .+..||+|+||+.+++.
T Consensus 536 ~P~~rGkGIGk~Ll~~l~~~ak~~g-~~~i~l~~-----~a~~FYek~GF~~~~~~ 585 (614)
T PRK12308 536 EAGWQVQGQGSALVQYLVEKARQMA-IKKVFVLT-----RVPEFFMKQGFSPTSKS 585 (614)
T ss_pred CHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEee-----CcHHHHHHCCCEECCcc
Confidence 9999999999999999999999998 88888765 24689999999998853
No 94
>PRK01346 hypothetical protein; Provisional
Probab=99.28 E-value=8.5e-11 Score=117.10 Aligned_cols=127 Identities=15% Similarity=0.099 Sum_probs=99.7
Q ss_pred cEEEEcCCchhHHHHHHHhHhhCCCCCCHHHHHHHHh--cCceEEEEEeCCEEEEEEEEEecC-----C-CCCeEEEEEE
Q psy17026 273 KIELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLE--AGELAKLAYYNDIVIGAVCCRIDP-----N-NGRKLYIMTL 344 (435)
Q Consensus 273 ~~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~ivG~~~~~~~~-----~-~~~~~~i~~i 344 (435)
.++||+++++|++++.++...+|...+.......... .....+++++++++||++.+.... . .....+|..+
T Consensus 6 ~~~iR~~~~~D~~~i~~L~~~~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v 85 (411)
T PRK01346 6 AITIRTATEEDWPAWFRAAATGFGDSPSDEELEAWRALVEPDRTLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGVTAV 85 (411)
T ss_pred CceeecCCHHHHHHHHHHHHHHcCCCCChHHHHHHHHhcCcCCeEEEEECCEEEEEEEEeccccccCCCCccceeEEEEE
Confidence 4689999999999999999999876554433333222 344567888899999998876432 1 1146899999
Q ss_pred EECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecc
Q psy17026 345 GCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHY 405 (435)
Q Consensus 345 ~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 405 (435)
+|+|+|||+|+|++||+++++.+++.| +..+.+.+.. .+||+++||........|
T Consensus 86 ~V~P~~RgrGig~~Ll~~~l~~a~~~g-~~~~~L~~~~-----~~~Y~r~Gf~~~~~~~~~ 140 (411)
T PRK01346 86 TVAPTHRRRGLLTALMREQLRRIRERG-EPVAALTASE-----GGIYGRFGYGPATYSQSL 140 (411)
T ss_pred EEChhhcCCCHHHHHHHHHHHHHHHCC-CcEEEEECCc-----hhhHhhCCCeeccceEEE
Confidence 999999999999999999999999998 7777776543 369999999998876655
No 95
>KOG2488|consensus
Probab=99.27 E-value=4.4e-11 Score=100.48 Aligned_cols=119 Identities=21% Similarity=0.331 Sum_probs=95.4
Q ss_pred hhHHHHHHHhHhhCCC-------CCCHH-HHHHHHhcCceEEEEEeCC-EEEEEEEEEecCCCC-CeEEEEEEEECCCcc
Q psy17026 282 HNIKQLKRLNTVVFPV-------SYNEK-FYKDVLEAGELAKLAYYND-IVIGAVCCRIDPNNG-RKLYIMTLGCLSPYR 351 (435)
Q Consensus 282 ~d~~~~~~l~~~~~~~-------~~~~~-~~~~~~~~~~~~~v~~~~~-~ivG~~~~~~~~~~~-~~~~i~~i~V~p~~r 351 (435)
++++.+..|....... .|.+. ...+.......+.+++.++ .+|||..+...-+.+ ...|++.+-|.++||
T Consensus 54 ~~ldw~f~L~k~nm~~~Y~qs~~Gw~~~~K~~El~~~~~~Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR 133 (202)
T KOG2488|consen 54 EDLDWCFSLFKKNMGAMYRQSSWGWDDNSKAKELRNRKLRYICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYR 133 (202)
T ss_pred HHHHHHHHHHHhhhHHHhhhcccccCchhHHHHHhhccceEEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhh
Confidence 6777888777664322 25544 3344444455556666665 899999998877654 689999999999999
Q ss_pred cCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 352 RLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 352 gkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
|+|||+.||+.+...+.... .+.|.|+|..+|.+|+.||.++||.....
T Consensus 134 ~kGiGk~LL~~l~~~a~~~~-~~kVmLTVf~~N~~al~Fy~~~gf~~~~~ 182 (202)
T KOG2488|consen 134 GKGIGKFLLDTLEKLADSRH-MRKVMLTVFSENIRALGFYHRLGFVVDEE 182 (202)
T ss_pred ccChHHHHHHHHHHHHHHHH-hhhheeeeecccchhHHHHHHcCcccCCC
Confidence 99999999999999999887 88899999999999999999999998764
No 96
>PRK13688 hypothetical protein; Provisional
Probab=99.26 E-value=5.8e-11 Score=100.91 Aligned_cols=107 Identities=20% Similarity=0.300 Sum_probs=80.8
Q ss_pred EeeCCcccHHHHHHHhHhcCCccccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecC--------CCCeEEEEEEEeC
Q psy17026 106 LGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPN--------NGRKLYIMTLGCL 177 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~--------~~~~~~i~~l~V~ 177 (435)
+|++...|++++.++...+|. .+ .....+++++++++||++.+..... ....++|..++|+
T Consensus 20 ~~~~~~~dl~~l~~l~~~~f~-~~----------~~~~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~ 88 (156)
T PRK13688 20 FREFGNQELSMLEELQANIIE-ND----------SESPFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVL 88 (156)
T ss_pred HHHhcHHHHHHHHhhhhhEee-cC----------CCCCEEEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEEC
Confidence 488889999999999888873 21 2345678889999999987754321 1245789999999
Q ss_pred CCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEe
Q psy17026 178 SPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETK 232 (435)
Q Consensus 178 p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~ 232 (435)
|+|||+|+|++|++.+. +.+ +. +.+...| .+.+||+|+||+..++.
T Consensus 89 p~~rgkGiG~~Ll~~a~----~~~-~~---~~~~~~~-~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 89 PKYQNRGYGEMLVDFAK----SFQ-LP---IKTIARN-KSKDFWLKLGFTPVEYK 134 (156)
T ss_pred HHHcCCCHHHHHHHHHH----HhC-Ce---EEEEecc-chHHHHHhCCCEEeEEe
Confidence 99999999999998644 344 33 3344555 58899999999998875
No 97
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.25 E-value=3.7e-10 Score=95.89 Aligned_cols=142 Identities=21% Similarity=0.232 Sum_probs=108.5
Q ss_pred cEEEEcCCchhHHHHHHHhHhhCCCCCCHHHHHHHHh-----cCceEEEEEeCCEEEEEEEEEecCCC---CCeEEEEEE
Q psy17026 273 KIELGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLE-----AGELAKLAYYNDIVIGAVCCRIDPNN---GRKLYIMTL 344 (435)
Q Consensus 273 ~~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~ivG~~~~~~~~~~---~~~~~i~~i 344 (435)
.+.|+..++.|.+.+.++....|. ++......+.+. .....+|+.++|++||.+.++...-. .....+..+
T Consensus 3 ~~~ir~e~~~d~~~i~~~~~~aF~-~~~e~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaPL 81 (171)
T COG3153 3 MMLIRTETPADIPAIEALTREAFG-PGREAKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAPL 81 (171)
T ss_pred ccEEEecChhhHHHHHHHHHHHhh-cchHHHHHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEeE
Confidence 467899999999999999999987 333333322222 24567899999999999987654433 267889999
Q ss_pred EECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccccccccceeeeeecccC
Q psy17026 345 GCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRN 423 (435)
Q Consensus 345 ~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~~~~m~~~l~~ 423 (435)
+|+|++||||||++|++.+++.++..| +..+.+.-.. .+|.++||+......-+-. +...+...|.+.|..
T Consensus 82 aV~p~~qg~GIG~~Lvr~~le~a~~~G-~~~v~vlGdp------~YY~rfGF~~~~~~~l~~p-~~~~~~~fl~~~L~~ 152 (171)
T COG3153 82 AVDPEYQGQGIGSALVREGLEALRLAG-ASAVVVLGDP------TYYSRFGFEPAAGAKLYAP-GPVPDERFLALELGD 152 (171)
T ss_pred EEchhhcCCcHHHHHHHHHHHHHHHCC-CCEEEEecCc------ccccccCcEEccccccccC-CCCCCceEEEEEccC
Confidence 999999999999999999999999999 6665544333 4899999999987544433 336788888888864
No 98
>PRK13688 hypothetical protein; Provisional
Probab=99.23 E-value=1.1e-10 Score=99.09 Aligned_cols=107 Identities=20% Similarity=0.306 Sum_probs=79.0
Q ss_pred EEcCCchhHHHHHHHhHhhCCCCCCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecC--------CCCCeEEEEEEEEC
Q psy17026 276 LGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDP--------NNGRKLYIMTLGCL 347 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~--------~~~~~~~i~~i~V~ 347 (435)
+++++.+|+.++.++...+|... ....++++..++++||++.+.... .....++|..++|+
T Consensus 20 ~~~~~~~dl~~l~~l~~~~f~~~-----------~~~~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~ 88 (156)
T PRK13688 20 FREFGNQELSMLEELQANIIEND-----------SESPFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVL 88 (156)
T ss_pred HHHhcHHHHHHHHhhhhhEeecC-----------CCCCEEEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEEEEC
Confidence 47778888888888877765211 344567788899999988764322 11255789999999
Q ss_pred CCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEe
Q psy17026 348 SPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETK 402 (435)
Q Consensus 348 p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~ 402 (435)
|+|||+|+|++|++.+. +.+ +. +.+...| .+.+||+|+||+.+++.
T Consensus 89 p~~rgkGiG~~Ll~~a~----~~~-~~---~~~~~~~-~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 89 PKYQNRGYGEMLVDFAK----SFQ-LP---IKTIARN-KSKDFWLKLGFTPVEYK 134 (156)
T ss_pred HHHcCCCHHHHHHHHHH----HhC-Ce---EEEEecc-chHHHHHhCCCEEeEEe
Confidence 99999999999998543 344 32 3444555 58899999999999876
No 99
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.23 E-value=3.8e-10 Score=85.88 Aligned_cols=61 Identities=28% Similarity=0.452 Sum_probs=53.4
Q ss_pred EEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 169 LYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 169 ~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
+.|..+.|+|+|||+|+|+.|+.++.+.+.+.| ...++.+..+|.+|+++|+|+||+....
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g--~~~~l~v~~~N~~s~~ly~klGf~~~~~ 82 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERG--KTPFLYVDADNEASIRLYEKLGFREIEE 82 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT--SEEEEEEETT-HHHHHHHHHCT-EEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCC--CcEEEEEECCCHHHHHHHHHcCCEEEEE
Confidence 469999999999999999999999999999998 5678999999999999999999998754
No 100
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.19 E-value=5e-10 Score=85.18 Aligned_cols=61 Identities=28% Similarity=0.452 Sum_probs=53.3
Q ss_pred EEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 339 LYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 339 ~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
+.|..+.|+|+|||+|+|+.++..+.+.+.++| ....+.+..+|.+|+++|+|+||+....
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g--~~~~l~v~~~N~~s~~ly~klGf~~~~~ 82 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERG--KTPFLYVDADNEASIRLYEKLGFREIEE 82 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT--SEEEEEEETT-HHHHHHHHHCT-EEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCC--CcEEEEEECCCHHHHHHHHHcCCEEEEE
Confidence 469999999999999999999999999999988 4567899999999999999999999864
No 101
>KOG3396|consensus
Probab=99.19 E-value=3.4e-10 Score=89.62 Aligned_cols=124 Identities=19% Similarity=0.311 Sum_probs=93.8
Q ss_pred cEEEEcCCchhHHH-HHHHhHhhCCC-CCCHHHHHHHHh----cCc--eEEEEEe--CCEEEEEEEEEecCC----CCCe
Q psy17026 273 KIELGDVTPHNIKQ-LKRLNTVVFPV-SYNEKFYKDVLE----AGE--LAKLAYY--NDIVIGAVCCRIDPN----NGRK 338 (435)
Q Consensus 273 ~~~ir~~~~~d~~~-~~~l~~~~~~~-~~~~~~~~~~~~----~~~--~~~v~~~--~~~ivG~~~~~~~~~----~~~~ 338 (435)
.+.+|++...|+.. +.++..+.-.. .-.++.+...+. ... ...|+++ .+++||.+.+..... .+..
T Consensus 6 ~~~lR~L~~~D~~kGf~elL~qLT~vG~vt~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g~r 85 (150)
T KOG3396|consen 6 GFKLRPLEEDDYGKGFIELLKQLTSVGVVTREQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCGSR 85 (150)
T ss_pred ceEEeecccccccchHHHHHHHHhhccccCHHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhhhccccc
Confidence 47899999999887 77776655433 233444433332 233 3334444 588999988765443 2256
Q ss_pred EEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEe
Q psy17026 339 LYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 400 (435)
Q Consensus 339 ~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~ 400 (435)
+.|.++.|++++|||++|+.|+..+...+++.| +..+.|++.+.| ..||+|+||...+
T Consensus 86 GhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lg-cYKi~LdC~~~n---v~FYeKcG~s~~~ 143 (150)
T KOG3396|consen 86 GHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLG-CYKIILDCDPKN---VKFYEKCGYSNAG 143 (150)
T ss_pred CceeEEEeChhhhhhHHhHHHHHHHHHHHHhcC-cEEEEEecchhh---hhHHHHcCccccc
Confidence 889999999999999999999999999999999 999999999955 5699999998765
No 102
>KOG2488|consensus
Probab=99.15 E-value=3.1e-10 Score=95.41 Aligned_cols=118 Identities=21% Similarity=0.324 Sum_probs=92.9
Q ss_pred ccHHHHHHHhHhcC-------CccccHHHHHHHHhc-CCeEEEEEECC-eEEEEEEEEeecCCC-CeEEEEEEEeCCCcc
Q psy17026 112 HNIKQLKRLNTVVF-------PVSYNEKFYKDVLEA-GELAKLAYYND-IVIGAVCCRIDPNNG-RKLYIMTLGCLSPYR 181 (435)
Q Consensus 112 ~d~~~l~~l~~~~~-------~~~~~~~~~~~~l~~-~~~~~v~~~~g-~iVG~~~~~~~~~~~-~~~~i~~l~V~p~~r 181 (435)
++++....|...-. +..|.+..-...+.. ...++++..++ ++|||.++....+.+ .+.|+..+-|.+.||
T Consensus 54 ~~ldw~f~L~k~nm~~~Y~qs~~Gw~~~~K~~El~~~~~~Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR 133 (202)
T KOG2488|consen 54 EDLDWCFSLFKKNMGAMYRQSSWGWDDNSKAKELRNRKLRYICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYR 133 (202)
T ss_pred HHHHHHHHHHHhhhHHHhhhcccccCchhHHHHHhhccceEEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhh
Confidence 45555555543311 123655544444444 44566777766 899999999888766 688899999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 182 RLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 182 g~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
|+|||+.||+.++..+.... ...|.|.|...|.+|+.||+++||....
T Consensus 134 ~kGiGk~LL~~l~~~a~~~~-~~kVmLTVf~~N~~al~Fy~~~gf~~~~ 181 (202)
T KOG2488|consen 134 GKGIGKFLLDTLEKLADSRH-MRKVMLTVFSENIRALGFYHRLGFVVDE 181 (202)
T ss_pred ccChHHHHHHHHHHHHHHHH-hhhheeeeecccchhHHHHHHcCcccCC
Confidence 99999999999999999987 8899999999999999999999998553
No 103
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.12 E-value=3.4e-10 Score=106.03 Aligned_cols=78 Identities=12% Similarity=0.233 Sum_probs=67.5
Q ss_pred eEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHH
Q psy17026 143 LAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYK 222 (435)
Q Consensus 143 ~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~ 222 (435)
.+++..++|++||++.+.. .++..++|+|+|||+|+|++|++++++++++.| +..+++.+... +.+||+
T Consensus 7 ~~~v~~~~~~iVG~~~l~~-------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g-~~~i~L~t~~~---~~~fYe 75 (297)
T cd02169 7 TVGIFDDAGELIATGSIAG-------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEG-IFHLFLFTKPK---NAKFFR 75 (297)
T ss_pred EEEEEEECCEEEEEEEecc-------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEEEccc---HHHHHH
Confidence 3555667899999998753 258999999999999999999999999999999 99999998764 469999
Q ss_pred hCCCEEEEE
Q psy17026 223 KFGFEIVET 231 (435)
Q Consensus 223 k~GF~~~~~ 231 (435)
|+||+..+.
T Consensus 76 k~GF~~~~~ 84 (297)
T cd02169 76 GLGFKELAN 84 (297)
T ss_pred HCCCEEecc
Confidence 999998883
No 104
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.03 E-value=1.5e-09 Score=101.73 Aligned_cols=82 Identities=11% Similarity=0.212 Sum_probs=68.2
Q ss_pred ceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHH
Q psy17026 312 ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY 391 (435)
Q Consensus 312 ~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y 391 (435)
..+++..+++++||++.+.. .++..++|+|+|||+|+|++|++.++++++++| +..+.+.+... +..||
T Consensus 6 ~~~~v~~~~~~iVG~~~l~~-------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g-~~~i~L~t~~~---~~~fY 74 (297)
T cd02169 6 YTVGIFDDAGELIATGSIAG-------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEG-IFHLFLFTKPK---NAKFF 74 (297)
T ss_pred EEEEEEEECCEEEEEEEecc-------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCC-CCEEEEEEccc---HHHHH
Confidence 34555567799999876642 258899999999999999999999999999999 99999998764 46899
Q ss_pred HhcCcEEEeEeec
Q psy17026 392 KKFGFEIVETKQH 404 (435)
Q Consensus 392 ~k~GF~~~~~~~~ 404 (435)
+|+||+..+...+
T Consensus 75 ek~GF~~~~~~~~ 87 (297)
T cd02169 75 RGLGFKELANASD 87 (297)
T ss_pred HHCCCEEecccCC
Confidence 9999999984333
No 105
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=99.03 E-value=2.7e-09 Score=95.16 Aligned_cols=87 Identities=16% Similarity=0.217 Sum_probs=72.9
Q ss_pred EEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhc
Q psy17026 315 KLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKF 394 (435)
Q Consensus 315 ~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~ 394 (435)
+....+|++|+.+...... +..+.|.+++++|+|||||+|+.|+.++...+-.+| +...|.+...|..|.+.|+|.
T Consensus 180 ~f~~~d~~iVa~A~t~a~~--~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eG--k~~~L~~~~~N~~A~~iY~ri 255 (268)
T COG3393 180 YFLEGDGKIVAKAETAAEN--PAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEG--KIPCLFVNSDNPVARRIYQRI 255 (268)
T ss_pred EEEccCCcEEEeeeccccC--CcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCC--CeeEEEEecCCHHHHHHHHHh
Confidence 4445566999977665444 366899999999999999999999999999999999 556677779999999999999
Q ss_pred CcEEEeEeecc
Q psy17026 395 GFEIVETKQHY 405 (435)
Q Consensus 395 GF~~~~~~~~~ 405 (435)
||+..|+...|
T Consensus 256 GF~~~g~~~~~ 266 (268)
T COG3393 256 GFREIGEFREY 266 (268)
T ss_pred CCeecceEEEE
Confidence 99999976544
No 106
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=99.01 E-value=3.3e-09 Score=94.59 Aligned_cols=87 Identities=15% Similarity=0.182 Sum_probs=73.6
Q ss_pred eEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHH
Q psy17026 143 LAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYK 222 (435)
Q Consensus 143 ~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~ 222 (435)
..+....+|+||..+....... ..+.|..++++|+|||+|+++.|+..+....-..| +..+|.+..+|+.|.+.|+
T Consensus 178 ~~~f~~~d~~iVa~A~t~a~~~--~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eG--k~~~L~~~~~N~~A~~iY~ 253 (268)
T COG3393 178 RTYFLEGDGKIVAKAETAAENP--AYAQINGVYTHPEYRGKGYATALVATLAAKLLAEG--KIPCLFVNSDNPVARRIYQ 253 (268)
T ss_pred eEEEEccCCcEEEeeeccccCC--cceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCC--CeeEEEEecCCHHHHHHHH
Confidence 3444445569999887766655 35889999999999999999999999999999999 6777778899999999999
Q ss_pred hCCCEEEEEee
Q psy17026 223 KFGFEIVETKQ 233 (435)
Q Consensus 223 k~GF~~~~~~~ 233 (435)
|.||+..|...
T Consensus 254 riGF~~~g~~~ 264 (268)
T COG3393 254 RIGFREIGEFR 264 (268)
T ss_pred HhCCeecceEE
Confidence 99999988543
No 107
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.99 E-value=2e-09 Score=86.60 Aligned_cols=131 Identities=23% Similarity=0.238 Sum_probs=93.9
Q ss_pred EEcCCchhHHHHHHHhHhhCCC----CCCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcc
Q psy17026 276 LGDVTPHNIKQLKRLNTVVFPV----SYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYR 351 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~r 351 (435)
+..++...+.+++.|..+.|-. +|.+-.-.+......+.++...+|+++|++-+...........|..+.|.|++|
T Consensus 10 ~~~Lt~~ely~LlkLRv~VFVVEQ~CPY~E~Dg~Dl~~~~~Hl~~~~~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~R 89 (155)
T COG2153 10 FNDLTVRELYELLKLRVDVFVVEQNCPYPELDGKDLLGDTRHLLGWTPDGELVAYARLLPPGAEYEEVSIGRVIVSPAAR 89 (155)
T ss_pred hhhcCHHHHHHHHHhheeEEEEecCCCCcCcCCcccccccceEEEEcCCCeEEEEEecCCCCCCcCceeeeeEEECHhhh
Confidence 4556667778888887777743 333221122222334444444499999998776665544446799999999999
Q ss_pred cCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccccccc
Q psy17026 352 RLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEP 411 (435)
Q Consensus 352 gkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~ 411 (435)
|+|+|.+||..+++.+.+...-+.+.|.... ....||.++||..++. .|..+|.+
T Consensus 90 G~glG~~Lm~~AL~~~~~~~p~~~v~l~AQa---hLq~fYa~~GFv~~~e--~yledGIp 144 (155)
T COG2153 90 GQGLGQQLMEKALETAGREWPDKPVYLGAQA---HLQDFYASFGFVRVGE--EYLEDGIP 144 (155)
T ss_pred ccchhHHHHHHHHHHHHhhCCCCCeEEehHH---HHHHHHHHhCcEEcCc--hhhcCCCC
Confidence 9999999999999999987545667777665 7999999999999984 56665433
No 108
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=98.98 E-value=5.4e-09 Score=91.77 Aligned_cols=102 Identities=18% Similarity=0.205 Sum_probs=83.6
Q ss_pred CEEEEEEEEEecCC--CCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEE
Q psy17026 321 DIVIGAVCCRIDPN--NGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEI 398 (435)
Q Consensus 321 ~~ivG~~~~~~~~~--~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~ 398 (435)
+++||.+.+..... ..... ...+.+.|+|+|+|+|+.++..++++++...+++++.+.|.+.|.+|+++++|+||+.
T Consensus 77 ~~~iG~~~~~~~~~~~~~~~~-~ig~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~~ 155 (187)
T COG1670 77 GELIGVIGLSDIDRAANGDLA-EIGYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFRL 155 (187)
T ss_pred CeEEEEEEEEEeccccccceE-EEEEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCChh
Confidence 48999998876652 22334 4467889999999999999999999999965599999999999999999999999999
Q ss_pred EeEeecc-cccccccceeeeeecccC
Q psy17026 399 VETKQHY-YKRIEPADAYVLQKTLRN 423 (435)
Q Consensus 399 ~~~~~~~-y~~~~~~~~~~m~~~l~~ 423 (435)
.+..+.. +..+...|.+.+......
T Consensus 156 eg~~~~~~~~~g~~~d~~~~~~~~~e 181 (187)
T COG1670 156 EGELRQHEFIKGRWRDTVLYSLLRDE 181 (187)
T ss_pred hhhhhhceeeCCeeeeEEEEEEechh
Confidence 9987776 444456777777766543
No 109
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.97 E-value=7.3e-09 Score=98.68 Aligned_cols=81 Identities=14% Similarity=0.221 Sum_probs=71.1
Q ss_pred CeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHH
Q psy17026 142 ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY 221 (435)
Q Consensus 142 ~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y 221 (435)
+..++++++|++||++++..+ .+..++|+|+|||+|+|++|+.++++.+++.| +..+++.+...| .+||
T Consensus 31 d~~vv~~~~~~lVg~g~l~g~-------~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G-~~~l~l~Tk~~~---~~fy 99 (332)
T TIGR00124 31 EIFIAVYEDEEIIGCGGIAGN-------VIKCVAIDESLRGEGLALQLMTELENLAYELG-RFHLFIFTKPEY---AALF 99 (332)
T ss_pred CEEEEEEECCEEEEEEEEecC-------EEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcC-CCEEEEEECchH---HHHH
Confidence 567788899999999988421 48899999999999999999999999999999 999999997644 6899
Q ss_pred HhCCCEEEEEee
Q psy17026 222 KKFGFEIVETKQ 233 (435)
Q Consensus 222 ~k~GF~~~~~~~ 233 (435)
+++||...+...
T Consensus 100 ~klGF~~i~~~~ 111 (332)
T TIGR00124 100 EYCGFKTLAEAK 111 (332)
T ss_pred HHcCCEEeeeec
Confidence 999999988754
No 110
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=98.95 E-value=9.9e-09 Score=90.05 Aligned_cols=102 Identities=17% Similarity=0.185 Sum_probs=80.4
Q ss_pred CeEEEEEEEEeecC-CCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEE
Q psy17026 151 DIVIGAVCCRIDPN-NGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIV 229 (435)
Q Consensus 151 g~iVG~~~~~~~~~-~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~ 229 (435)
+++||.+.+..... .........+.+.|+|||+|+|+.++..+++++....++.++.+.|...|.+|+++++|+||+..
T Consensus 77 ~~~iG~~~~~~~~~~~~~~~~~ig~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~~e 156 (187)
T COG1670 77 GELIGVIGLSDIDRAANGDLAEIGYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFRLE 156 (187)
T ss_pred CeEEEEEEEEEeccccccceEEEEEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCChhh
Confidence 48999999987652 11223445566799999999999999999999999655999999999999999999999999999
Q ss_pred EEeecc-cccCCCCceEEEEeecc
Q psy17026 230 ETKQHY-YKRIEPADAYVLQKTLR 252 (435)
Q Consensus 230 ~~~~~~-~~~~~~~d~~~m~~~l~ 252 (435)
+..... +..+...|.+.+.....
T Consensus 157 g~~~~~~~~~g~~~d~~~~~~~~~ 180 (187)
T COG1670 157 GELRQHEFIKGRWRDTVLYSLLRD 180 (187)
T ss_pred hhhhhceeeCCeeeeEEEEEEech
Confidence 987765 33344455666554443
No 111
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.88 E-value=7e-09 Score=83.51 Aligned_cols=122 Identities=22% Similarity=0.214 Sum_probs=91.4
Q ss_pred eeCCcccHHHHHHHhHhcCC----ccccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccC
Q psy17026 107 GDVTPHNIKQLKRLNTVVFP----VSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRR 182 (435)
Q Consensus 107 r~~~~~d~~~l~~l~~~~~~----~~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg 182 (435)
..++...+-++..|...+|- -||++-.-.+.+....+.++...+|++|+++-+.........+.|+.+.|.|++||
T Consensus 11 ~~Lt~~ely~LlkLRv~VFVVEQ~CPY~E~Dg~Dl~~~~~Hl~~~~~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~RG 90 (155)
T COG2153 11 NDLTVRELYELLKLRVDVFVVEQNCPYPELDGKDLLGDTRHLLGWTPDGELVAYARLLPPGAEYEEVSIGRVIVSPAARG 90 (155)
T ss_pred hhcCHHHHHHHHHhheeEEEEecCCCCcCcCCcccccccceEEEEcCCCeEEEEEecCCCCCCcCceeeeeEEECHhhhc
Confidence 55677777788888777773 24443222233333444555555999999998887776655688999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 183 LGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 183 ~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
+|+|++||..+++.+.....-..+.+.... -.+.||.+.||...+.
T Consensus 91 ~glG~~Lm~~AL~~~~~~~p~~~v~l~AQa---hLq~fYa~~GFv~~~e 136 (155)
T COG2153 91 QGLGQQLMEKALETAGREWPDKPVYLGAQA---HLQDFYASFGFVRVGE 136 (155)
T ss_pred cchhHHHHHHHHHHHHhhCCCCCeEEehHH---HHHHHHHHhCcEEcCc
Confidence 999999999999999988744556666544 6789999999998774
No 112
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=98.87 E-value=3e-08 Score=82.64 Aligned_cols=87 Identities=15% Similarity=0.074 Sum_probs=73.9
Q ss_pred EEEEEECCeEEEEEEEEeecCCC---CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHH
Q psy17026 144 AKLAYYNDIVIGAVCCRIDPNNG---RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDF 220 (435)
Q Consensus 144 ~~v~~~~g~iVG~~~~~~~~~~~---~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~ 220 (435)
+|....++++||++.+...-... ..++| ...|.|+.||+|+|+++|+.+++.|++.| +..|.+.+..+|.+|.+.
T Consensus 71 y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~lg-i~~Vlvtcd~dN~ASrkv 148 (174)
T COG3981 71 YWAVDEDGQIVGFINLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEMLKLALEKARELG-IKKVLVTCDKDNIASRKV 148 (174)
T ss_pred EEEEecCCcEEEEEEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHHHHHHHHHHHcC-CCeEEEEeCCCCchhhHH
Confidence 44444579999999998765443 23444 57899999999999999999999999999 999999999999999999
Q ss_pred HHhCCCEEEEEe
Q psy17026 221 YKKFGFEIVETK 232 (435)
Q Consensus 221 y~k~GF~~~~~~ 232 (435)
-+++|=.++.+.
T Consensus 149 I~~NGGile~~~ 160 (174)
T COG3981 149 IEANGGILENEF 160 (174)
T ss_pred HHhcCCEEeEEE
Confidence 999998877653
No 113
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.87 E-value=1.8e-08 Score=95.99 Aligned_cols=82 Identities=15% Similarity=0.226 Sum_probs=70.5
Q ss_pred ceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHH
Q psy17026 312 ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY 391 (435)
Q Consensus 312 ~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y 391 (435)
..++++.++|++||++.+.. + .+..++|+|+|||+|+|+.|+.++++.+++.| +.++.+.+...| .+||
T Consensus 31 d~~vv~~~~~~lVg~g~l~g---~----~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G-~~~l~l~Tk~~~---~~fy 99 (332)
T TIGR00124 31 EIFIAVYEDEEIIGCGGIAG---N----VIKCVAIDESLRGEGLALQLMTELENLAYELG-RFHLFIFTKPEY---AALF 99 (332)
T ss_pred CEEEEEEECCEEEEEEEEec---C----EEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcC-CCEEEEEECchH---HHHH
Confidence 46677788999999987732 1 48899999999999999999999999999999 999999887644 5799
Q ss_pred HhcCcEEEeEeec
Q psy17026 392 KKFGFEIVETKQH 404 (435)
Q Consensus 392 ~k~GF~~~~~~~~ 404 (435)
+++||...+...+
T Consensus 100 ~klGF~~i~~~~~ 112 (332)
T TIGR00124 100 EYCGFKTLAEAKD 112 (332)
T ss_pred HHcCCEEeeeecc
Confidence 9999999997654
No 114
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.82 E-value=5.8e-08 Score=88.98 Aligned_cols=128 Identities=14% Similarity=0.175 Sum_probs=84.2
Q ss_pred CCcEEEEcCCchhHHHHHHH-hHhhCCCCCCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCC
Q psy17026 271 RPKIELGDVTPHNIKQLKRL-NTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSP 349 (435)
Q Consensus 271 ~~~~~ir~~~~~d~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~ 349 (435)
+..++|++++++.+.....- +...+-..|.. .+..+.. ..-|++.++|++|+.+......++ ..+| .|.++|+
T Consensus 126 p~~y~l~~Ide~l~~~~~~e~~s~d~~~~~~s--~e~Fl~~-G~Gf~i~~~~~iVs~~~s~~~~~~--~~EI-~I~T~~~ 199 (265)
T PF12746_consen 126 PEGYELKRIDEELYENSLEEEWSEDLVSQFSS--YEDFLKN-GFGFCILHDGEIVSGCSSYFVYEN--GIEI-DIETHPE 199 (265)
T ss_dssp -TTCEEEE--HHHHHHHHHSCCCGGGTTTSSS--HHHHHHH---EEEEEETTEEEEEEEEEEEETT--EEEE-EEEE-CC
T ss_pred CCCeEEEECCHHHHHhhhhhHhHHHHHHhcCC--HHHHHhc-CcEEEEEECCEEEEEEEEEEEECC--EEEE-EEEECHH
Confidence 35678999998777766531 11112223321 2333333 456888889999887665555543 2455 7999999
Q ss_pred cccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeeccccc
Q psy17026 350 YRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKR 408 (435)
Q Consensus 350 ~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~ 408 (435)
|||||+|+.+...++..|.++| + .-.....|.+++++-+|+||+.......|+-+
T Consensus 200 yR~kGLA~~~aa~~I~~Cl~~~-l---~P~WDc~N~~S~~lA~kLGf~~~~~Y~~Y~v~ 254 (265)
T PF12746_consen 200 YRGKGLATAVAAAFILECLENG-L---YPSWDCHNLASIALAEKLGFHFDFEYTAYEVN 254 (265)
T ss_dssp CTTSSHHHHHHHHHHHHHHHTT-----EEE-EESSHHHHHHHHHCT--EEEEEEEE---
T ss_pred hhcCCHHHHHHHHHHHHHHHCC-C---CcCeeCCCHHHHHHHHHcCCcccceeeeeeec
Confidence 9999999999999999999999 3 33444589999999999999999999888653
No 115
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=98.76 E-value=5.3e-08 Score=81.17 Aligned_cols=89 Identities=15% Similarity=0.057 Sum_probs=75.8
Q ss_pred EEEEEeCCEEEEEEEEEecCCCC---CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHH
Q psy17026 314 AKLAYYNDIVIGAVCCRIDPNNG---RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDF 390 (435)
Q Consensus 314 ~~v~~~~~~ivG~~~~~~~~~~~---~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~ 390 (435)
+|.+..++++||++.++..-+.. ..++| ++.|.|..||||+|+.+|+.+++.|++.| ++.+.++|..+|.+|.+.
T Consensus 71 y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~lg-i~~Vlvtcd~dN~ASrkv 148 (174)
T COG3981 71 YWAVDEDGQIVGFINLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEMLKLALEKARELG-IKKVLVTCDKDNIASRKV 148 (174)
T ss_pred EEEEecCCcEEEEEEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHHHHHHHHHHHcC-CCeEEEEeCCCCchhhHH
Confidence 34444469999999998876544 23455 78999999999999999999999999999 999999999999999999
Q ss_pred HHhcCcEEEeEeec
Q psy17026 391 YKKFGFEIVETKQH 404 (435)
Q Consensus 391 y~k~GF~~~~~~~~ 404 (435)
-++.|=..++++..
T Consensus 149 I~~NGGile~~~~~ 162 (174)
T COG3981 149 IEANGGILENEFFG 162 (174)
T ss_pred HHhcCCEEeEEEcc
Confidence 99999777776543
No 116
>KOG3397|consensus
Probab=98.73 E-value=9e-08 Score=79.10 Aligned_cols=129 Identities=22% Similarity=0.363 Sum_probs=93.7
Q ss_pred CceEEeeCC--cccHHHHHHHhHhcCCccccH--HHHHHHHhcCCeEEEE--EECCeEEEEEEEEeecCCCCeEEEEEEE
Q psy17026 102 PKIELGDVT--PHNIKQLKRLNTVVFPVSYNE--KFYKDVLEAGELAKLA--YYNDIVIGAVCCRIDPNNGRKLYIMTLG 175 (435)
Q Consensus 102 ~~i~ir~~~--~~d~~~l~~l~~~~~~~~~~~--~~~~~~l~~~~~~~v~--~~~g~iVG~~~~~~~~~~~~~~~i~~l~ 175 (435)
..+.+.++. ++-+++...|.+..|+..-+. ..+.+..+.....++. +...++||-+-+.......+.++++.+.
T Consensus 11 ~~l~~vPiH~rPELlk~~~~LIN~eWPRS~TsR~hSL~~ScDs~P~sL~Ll~E~~~~VigH~rLS~i~n~~~al~VEsVV 90 (225)
T KOG3397|consen 11 PDLFFVPLHDRPELLKESMTLINSEWPRSDTSREHSLKKSCDSPPMSLLLLNEENDEVLGHSRLSHLPNRDHALWVESVV 90 (225)
T ss_pred CcceeEeccccHHHHHHHHHHHhccCCccchhhhhhhhcccCCCCeeeeeecccccceeeeeccccCCCCCceeEEEEEE
Confidence 345555654 445566666666666644322 2233333333344443 4466889988777666666789999999
Q ss_pred eCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecc
Q psy17026 176 CLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHY 235 (435)
Q Consensus 176 V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 235 (435)
|+.+.||+|.|+.|++.++.+++..| ++.++|.+.++ .+||+++||+...-..++
T Consensus 91 V~k~~RG~GFGk~lMk~~E~~~R~~g-f~~~yLsT~DQ----~~FYe~lGYe~c~Pi~~~ 145 (225)
T KOG3397|consen 91 VKKDQRGLGFGKFLMKSTEKWMREKG-FNEAYLSTDDQ----CRFYESLGYEKCDPIVHS 145 (225)
T ss_pred EehhhccccHHHHHHHHHHHHHHHhh-hhheeeecccc----hhhhhhhcccccCceecc
Confidence 99999999999999999999999999 99999998774 599999999987654443
No 117
>KOG3397|consensus
Probab=98.72 E-value=7e-08 Score=79.75 Aligned_cols=83 Identities=24% Similarity=0.444 Sum_probs=74.8
Q ss_pred EeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcE
Q psy17026 318 YYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFE 397 (435)
Q Consensus 318 ~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~ 397 (435)
+...+++|-.-+....+....+++..+.|+.+.||+|.|+.||..++.|++..| ++.++|.+.. -..||+++||+
T Consensus 63 E~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~g-f~~~yLsT~D----Q~~FYe~lGYe 137 (225)
T KOG3397|consen 63 EENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKG-FNEAYLSTDD----QCRFYESLGYE 137 (225)
T ss_pred ccccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhh-hhheeeeccc----chhhhhhhccc
Confidence 345789999888888887788999999999999999999999999999999999 9999999877 56799999999
Q ss_pred EEeEeecc
Q psy17026 398 IVETKQHY 405 (435)
Q Consensus 398 ~~~~~~~~ 405 (435)
.+.-+..+
T Consensus 138 ~c~Pi~~~ 145 (225)
T KOG3397|consen 138 KCDPIVHS 145 (225)
T ss_pred ccCceecc
Confidence 98877666
No 118
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.62 E-value=1.1e-06 Score=80.59 Aligned_cols=127 Identities=13% Similarity=0.128 Sum_probs=82.7
Q ss_pred CCceEEeeCCcccHHHHHHH-hHhcCCccccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCC
Q psy17026 101 RPKIELGDVTPHNIKQLKRL-NTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSP 179 (435)
Q Consensus 101 ~~~i~ir~~~~~d~~~l~~l-~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~ 179 (435)
+....|++++++.+.....- +...+...|. .....+.. ...+++..+|+||+.++-...... ..-.++.++|+
T Consensus 126 p~~y~l~~Ide~l~~~~~~e~~s~d~~~~~~--s~e~Fl~~-G~Gf~i~~~~~iVs~~~s~~~~~~---~~EI~I~T~~~ 199 (265)
T PF12746_consen 126 PEGYELKRIDEELYENSLEEEWSEDLVSQFS--SYEDFLKN-GFGFCILHDGEIVSGCSSYFVYEN---GIEIDIETHPE 199 (265)
T ss_dssp -TTCEEEE--HHHHHHHHHSCCCGGGTTTSS--SHHHHHHH---EEEEEETTEEEEEEEEEEEETT---EEEEEEEE-CC
T ss_pred CCCeEEEECCHHHHHhhhhhHhHHHHHHhcC--CHHHHHhc-CcEEEEEECCEEEEEEEEEEEECC---EEEEEEEECHH
Confidence 34678899998877766421 1111222332 12334443 467788889999876555444433 35668999999
Q ss_pred ccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccc
Q psy17026 180 YRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYK 237 (435)
Q Consensus 180 ~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~ 237 (435)
|||+|+++.+-.+++..+.++| +.- .+.+ .|.+|+++-+|+||+.......|+.
T Consensus 200 yR~kGLA~~~aa~~I~~Cl~~~-l~P-~WDc--~N~~S~~lA~kLGf~~~~~Y~~Y~v 253 (265)
T PF12746_consen 200 YRGKGLATAVAAAFILECLENG-LYP-SWDC--HNLASIALAEKLGFHFDFEYTAYEV 253 (265)
T ss_dssp CTTSSHHHHHHHHHHHHHHHTT--EE-E-EE--SSHHHHHHHHHCT--EEEEEEEE--
T ss_pred hhcCCHHHHHHHHHHHHHHHCC-CCc-CeeC--CCHHHHHHHHHcCCcccceeeeeee
Confidence 9999999999999999999999 333 4444 6999999999999999988777754
No 119
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.59 E-value=8.6e-07 Score=70.66 Aligned_cols=111 Identities=22% Similarity=0.325 Sum_probs=70.0
Q ss_pred eCCcccHHHHHHHhHhcCCccccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHH
Q psy17026 108 DVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGS 187 (435)
Q Consensus 108 ~~~~~d~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~ 187 (435)
.+++.|.-.+..++ | ..+.+.+...++.....+++..|++++|.+.+..... .+.+.+++|++-=|++|+|+
T Consensus 9 ~ls~Qd~iDL~KIw----p-~~~~~~l~~~l~~~~~l~aArFNdRlLgAv~v~~~~~---~~~L~~l~VRevTRrRGVG~ 80 (128)
T PF12568_consen 9 TLSEQDRIDLAKIW----P-QQDPEQLEQWLDEGHRLFAARFNDRLLGAVKVTISGQ---QAELSDLCVREVTRRRGVGL 80 (128)
T ss_dssp S--HHHHHHHHHH-----T-TS----------SSEEEEEEEETTEEEEEEEEEEETT---EEEEEEEEE-TT-SSSSHHH
T ss_pred CCCHHHHHHHHHhC----C-CCCHHHHHHHhccCCeEEEEEechheeeeEEEEEcCc---ceEEeeEEEeeccccccHHH
Confidence 34455555555544 3 2334455667777888999999999999999998764 57999999999999999999
Q ss_pred HHHHHHHHHHHhcCCccEEEEEEEc----CCHHHHHHHHhCCCEEE
Q psy17026 188 MMLEHILNYVEKDGNFDSIYLHVQL----NNDVAIDFYKKFGFEIV 229 (435)
Q Consensus 188 ~Ll~~~~~~a~~~g~~~~v~l~v~~----~N~~a~~~y~k~GF~~~ 229 (435)
.|++.+.+.+.+ +....+.... +-....+|.+.+||...
T Consensus 81 yLlee~~rq~p~---i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~ 123 (128)
T PF12568_consen 81 YLLEEVLRQLPD---IKHWWLADEGVEPQDRAVMAAFMQACGFSAQ 123 (128)
T ss_dssp HHHHHHHHHS-S-----EEEE--TT-S--THHHHHHHHHHHT-EE-
T ss_pred HHHHHHHHHCCC---CcEEEEecCCCcccchHHHHHHHHHcCcccc
Confidence 999999998842 5566655432 22455689999999644
No 120
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.59 E-value=2.9e-06 Score=73.91 Aligned_cols=119 Identities=17% Similarity=0.234 Sum_probs=75.1
Q ss_pred cHHHHHHHHhcCC-eEEEEEECC--eEEEEEEEEeecCCC-----------------------------------CeEEE
Q psy17026 130 NEKFYKDVLEAGE-LAKLAYYND--IVIGAVCCRIDPNNG-----------------------------------RKLYI 171 (435)
Q Consensus 130 ~~~~~~~~l~~~~-~~~v~~~~g--~iVG~~~~~~~~~~~-----------------------------------~~~~i 171 (435)
++..+...++.+. ..+++..++ +++|++.+..++.-. ...-|
T Consensus 14 sPnDL~~LlDaP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RI 93 (196)
T PF13718_consen 14 SPNDLQLLLDAPNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARI 93 (196)
T ss_dssp -HHHHHHHHH-TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEE
T ss_pred CHHHHHHHhcCCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeE
Confidence 4566677777665 566778888 999999988776520 45779
Q ss_pred EEEEeCCCccCCCHHHHHHHHHHHHHH-------------------------hcCCccEEEEEEEcCCHHHHHHHHhCCC
Q psy17026 172 MTLGCLSPYRRLGIGSMMLEHILNYVE-------------------------KDGNFDSIYLHVQLNNDVAIDFYKKFGF 226 (435)
Q Consensus 172 ~~l~V~p~~rg~GiG~~Ll~~~~~~a~-------------------------~~g~~~~v~l~v~~~N~~a~~~y~k~GF 226 (435)
..++|+|++|++|+|+++++.+++++. ..+ +.-+....-. ++.-.+||.|+||
T Consensus 94 vRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-vDylGtSFG~-t~~Ll~FW~k~gf 171 (196)
T PF13718_consen 94 VRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPG-VDYLGTSFGA-TPELLKFWQKNGF 171 (196)
T ss_dssp EEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S--SEEEEEEE---HHHHHHHHCTT-
T ss_pred EEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccC-CCEEEeccCC-CHHHHHHHHHCCc
Confidence 999999999999999999999999993 444 5555554433 4578999999999
Q ss_pred EEEEEeecccccCCCCceEEEEeec
Q psy17026 227 EIVETKQHYYKRIEPADAYVLQKTL 251 (435)
Q Consensus 227 ~~~~~~~~~~~~~~~~d~~~m~~~l 251 (435)
........- ..-.++..++|.+.+
T Consensus 172 ~pv~l~~~~-n~~SGe~S~imlr~l 195 (196)
T PF13718_consen 172 VPVYLGQTR-NEASGEHSAIMLRPL 195 (196)
T ss_dssp EEEEE-SS---TTT---EEEEEEE-
T ss_pred EEEEEecCc-ccccCceeeeEEeec
Confidence 988653332 223456667776654
No 121
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.59 E-value=3.7e-07 Score=64.24 Aligned_cols=63 Identities=29% Similarity=0.383 Sum_probs=54.2
Q ss_pred EEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEE
Q psy17026 315 KLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYL 378 (435)
Q Consensus 315 ~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l 378 (435)
+++..+++++|++.+..........++..++|+|+|||+|+|+.++..+++++.+.+ +..+.+
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~-~~~v~~ 64 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERG-AKRLRL 64 (65)
T ss_pred EEEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcC-CcEEEe
Confidence 456678999999998887654466889899999999999999999999999999977 777765
No 122
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.58 E-value=4.6e-07 Score=63.78 Aligned_cols=63 Identities=29% Similarity=0.383 Sum_probs=54.8
Q ss_pred EEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEE
Q psy17026 145 KLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYL 208 (435)
Q Consensus 145 ~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l 208 (435)
+++..++++||++.+.........+++..++|+|+|||+|+|++++..+++++.+.| +..+.+
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~-~~~v~~ 64 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERG-AKRLRL 64 (65)
T ss_pred EEEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcC-CcEEEe
Confidence 456678999999999887754456889999999999999999999999999999987 887765
No 123
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.58 E-value=2.2e-06 Score=68.39 Aligned_cols=112 Identities=21% Similarity=0.298 Sum_probs=70.5
Q ss_pred cCCchhHHHHHHHhHhhCCCCCCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHH
Q psy17026 278 DVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGS 357 (435)
Q Consensus 278 ~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~ 357 (435)
.+++.|.-++..++ .....+.++..++....+|.+.-|++++|.+.+.... ....+..++|.+.-|++|+|+
T Consensus 9 ~ls~Qd~iDL~KIw-----p~~~~~~l~~~l~~~~~l~aArFNdRlLgAv~v~~~~---~~~~L~~l~VRevTRrRGVG~ 80 (128)
T PF12568_consen 9 TLSEQDRIDLAKIW-----PQQDPEQLEQWLDEGHRLFAARFNDRLLGAVKVTISG---QQAELSDLCVREVTRRRGVGL 80 (128)
T ss_dssp S--HHHHHHHHHH------TTS----------SSEEEEEEEETTEEEEEEEEEEET---TEEEEEEEEE-TT-SSSSHHH
T ss_pred CCCHHHHHHHHHhC-----CCCCHHHHHHHhccCCeEEEEEechheeeeEEEEEcC---cceEEeeEEEeeccccccHHH
Confidence 34455666666655 2234455667777888899999999999999888876 457999999999999999999
Q ss_pred HHHHHHHHHHHHcCCccEEEEEEEc---CC-HHHHHHHHhcCcEEEe
Q psy17026 358 MMLEHILNYVEKDGNFDSIYLHVQL---NN-DVAIDFYKKFGFEIVE 400 (435)
Q Consensus 358 ~Ll~~~~~~~~~~g~~~~i~l~v~~---~N-~~a~~~y~k~GF~~~~ 400 (435)
.|++.+++.+.+ ++...+.... .+ ..+.+|...+||...+
T Consensus 81 yLlee~~rq~p~---i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~~ 124 (128)
T PF12568_consen 81 YLLEEVLRQLPD---IKHWWLADEGVEPQDRAVMAAFMQACGFSAQS 124 (128)
T ss_dssp HHHHHHHHHS-S-----EEEE--TT-S--THHHHHHHHHHHT-EE-S
T ss_pred HHHHHHHHHCCC---CcEEEEecCCCcccchHHHHHHHHHcCccccC
Confidence 999999998832 6666665542 22 3566899999996543
No 124
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.54 E-value=5.7e-07 Score=90.65 Aligned_cols=85 Identities=22% Similarity=0.353 Sum_probs=67.4
Q ss_pred eEEEEEE---CCeEEEEEEEEeecCC------CCeEEEEEEEe-----------CCCccCCCHHHHHHHHHHHHHHhcCC
Q psy17026 143 LAKLAYY---NDIVIGAVCCRIDPNN------GRKLYIMTLGC-----------LSPYRRLGIGSMMLEHILNYVEKDGN 202 (435)
Q Consensus 143 ~~~v~~~---~g~iVG~~~~~~~~~~------~~~~~i~~l~V-----------~p~~rg~GiG~~Ll~~~~~~a~~~g~ 202 (435)
..|..+. ++.+|||+.+...... ...+.|..+.| +|+|||+|+|++|++++++.|++.|
T Consensus 412 e~F~~y~~~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G- 490 (522)
T TIGR01211 412 EFFLSYEDPKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEG- 490 (522)
T ss_pred eEEEEEEcCCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCC-
Confidence 4455554 5789999998876542 13456666664 4899999999999999999999998
Q ss_pred ccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 203 FDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 203 ~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
+..+.+.. |..|++||+|+||...+.
T Consensus 491 ~~~i~v~s---~~~A~~FY~klGf~~~g~ 516 (522)
T TIGR01211 491 SEKILVIS---GIGVREYYRKLGYELDGP 516 (522)
T ss_pred CCEEEEee---CchHHHHHHHCCCEEEcc
Confidence 99998743 679999999999997764
No 125
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.53 E-value=2.9e-06 Score=73.95 Aligned_cols=117 Identities=16% Similarity=0.235 Sum_probs=73.9
Q ss_pred HHHHHHHh-cCceEEEEEeCC--EEEEEEEEEecCCCC-----------------------------------CeEEEEE
Q psy17026 302 KFYKDVLE-AGELAKLAYYND--IVIGAVCCRIDPNNG-----------------------------------RKLYIMT 343 (435)
Q Consensus 302 ~~~~~~~~-~~~~~~v~~~~~--~ivG~~~~~~~~~~~-----------------------------------~~~~i~~ 343 (435)
..+....+ .....|++...+ +++|.+.+.....-. ....|..
T Consensus 16 nDL~~LlDaP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvR 95 (196)
T PF13718_consen 16 NDLQLLLDAPNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVR 95 (196)
T ss_dssp HHHHHHHH-TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEE
T ss_pred HHHHHHhcCCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEE
Confidence 44455555 455677888888 999998876543210 5688999
Q ss_pred EEECCCcccCChHHHHHHHHHHHHH-------------------------HcCCccEEEEEEEcCCHHHHHHHHhcCcEE
Q psy17026 344 LGCLSPYRRLGIGSMMLEHILNYVE-------------------------KDGNFDSIYLHVQLNNDVAIDFYKKFGFEI 398 (435)
Q Consensus 344 i~V~p~~rgkGlg~~Ll~~~~~~~~-------------------------~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~ 398 (435)
|+|+|++|++|+|+++++.+.+++. ..+ +..+.+.-.. +....+|+.|.||.+
T Consensus 96 IAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~-vDylGtSFG~-t~~Ll~FW~k~gf~p 173 (196)
T PF13718_consen 96 IAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPG-VDYLGTSFGA-TPELLKFWQKNGFVP 173 (196)
T ss_dssp EEE-CCC-SSSHHHHHHHHHHHT-----------------------------S--SEEEEEEE---HHHHHHHHCTT-EE
T ss_pred EEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccC-CCEEEeccCC-CHHHHHHHHHCCcEE
Confidence 9999999999999999999999993 445 6665544433 457899999999999
Q ss_pred EeEeecccccccccceeeeeecc
Q psy17026 399 VETKQHYYKRIEPADAYVLQKTL 421 (435)
Q Consensus 399 ~~~~~~~y~~~~~~~~~~m~~~l 421 (435)
+.....- ...++..+.+|.+-|
T Consensus 174 v~l~~~~-n~~SGe~S~imlr~l 195 (196)
T PF13718_consen 174 VYLGQTR-NEASGEHSAIMLRPL 195 (196)
T ss_dssp EEE-SS---TTT---EEEEEEE-
T ss_pred EEEecCc-ccccCceeeeEEeec
Confidence 8764333 223577788887765
No 126
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.49 E-value=1e-06 Score=88.89 Aligned_cols=87 Identities=23% Similarity=0.372 Sum_probs=68.0
Q ss_pred CceEEEEEe---CCEEEEEEEEEecCCCC------CeEEEEEEEE-----------CCCcccCChHHHHHHHHHHHHHHc
Q psy17026 311 GELAKLAYY---NDIVIGAVCCRIDPNNG------RKLYIMTLGC-----------LSPYRRLGIGSMMLEHILNYVEKD 370 (435)
Q Consensus 311 ~~~~~v~~~---~~~ivG~~~~~~~~~~~------~~~~i~~i~V-----------~p~~rgkGlg~~Ll~~~~~~~~~~ 370 (435)
+...|+.+. ++.++||+.+....+.. ..+.|..+.| +++|||+|+|+.||+++++.+++.
T Consensus 410 G~e~F~~y~~~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~ 489 (522)
T TIGR01211 410 GTEFFLSYEDPKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEE 489 (522)
T ss_pred CCeEEEEEEcCCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHC
Confidence 334566665 57899999988765421 2344555543 589999999999999999999999
Q ss_pred CCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 371 GNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 371 g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
| +..+.+.. |..+++||+|+||+..+.
T Consensus 490 G-~~~i~v~s---~~~A~~FY~klGf~~~g~ 516 (522)
T TIGR01211 490 G-SEKILVIS---GIGVREYYRKLGYELDGP 516 (522)
T ss_pred C-CCEEEEee---CchHHHHHHHCCCEEEcc
Confidence 8 88888743 668999999999998875
No 127
>KOG4144|consensus
Probab=98.47 E-value=2.1e-07 Score=75.44 Aligned_cols=127 Identities=17% Similarity=0.274 Sum_probs=91.3
Q ss_pred CcEEEEcCCchhHHHHHHHhHhhCCCCCCHH--HHH-HHHhcCceE---------EEEEeCCEEEEEEEEEecCCCC---
Q psy17026 272 PKIELGDVTPHNIKQLKRLNTVVFPVSYNEK--FYK-DVLEAGELA---------KLAYYNDIVIGAVCCRIDPNNG--- 336 (435)
Q Consensus 272 ~~~~ir~~~~~d~~~~~~l~~~~~~~~~~~~--~~~-~~~~~~~~~---------~v~~~~~~ivG~~~~~~~~~~~--- 336 (435)
..+.|++..+++..+...+....|+..-... ... +.++-+..+ +.-...+.+||++.....+...
T Consensus 10 ~~~~irp~i~e~~q~~~~Lea~~FPe~erasfeii~~r~i~~pevc~glf~~~~h~~~~~~~tLIghIigs~~~~E~lt~ 89 (190)
T KOG4144|consen 10 EAPRIRPGIPESCQRRHTLEASEFPEDERASFEIIRERFISVPEVCPGLFDEIRHFLTLCEGTLIGHIIGSLWDKERLTQ 89 (190)
T ss_pred ccccCCCCChHHHHHHhccccccCChhHHHHHHHHHHHHhcchhhcchhhhhHHhhhhhccccceehhhcccCcchhhhH
Confidence 3456899999999999998888887543221 111 122222222 2222378899998776555322
Q ss_pred ----------CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 337 ----------RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 337 ----------~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
....|..++|+|+||.+|+|..|+..-++.+-++.-..++.|-+.. +.+.||+++||+.++.
T Consensus 90 ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~---pLvPFYEr~gFk~vgp 161 (190)
T KOG4144|consen 90 ESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHD---PLVPFYERFGFKAVGP 161 (190)
T ss_pred HHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecC---CccchhHhcCceeecc
Confidence 4588999999999999999999999988887776535667676666 8999999999999986
No 128
>KOG4144|consensus
Probab=98.45 E-value=1.8e-07 Score=75.88 Aligned_cols=129 Identities=16% Similarity=0.256 Sum_probs=92.5
Q ss_pred CCCceEEeeCCcccHHHHHHHhHhcCCccc--cHHHHHHHHh-cCCeE---------EEEEECCeEEEEEEEEeecCCC-
Q psy17026 100 DRPKIELGDVTPHNIKQLKRLNTVVFPVSY--NEKFYKDVLE-AGELA---------KLAYYNDIVIGAVCCRIDPNNG- 166 (435)
Q Consensus 100 ~~~~i~ir~~~~~d~~~l~~l~~~~~~~~~--~~~~~~~~l~-~~~~~---------~v~~~~g~iVG~~~~~~~~~~~- 166 (435)
.+..+.||+.-+++..++..|...+||..- +.+.....+. -++.. +.-...+.+||.+.-...+...
T Consensus 8 ~p~~~~irp~i~e~~q~~~~Lea~~FPe~erasfeii~~r~i~~pevc~glf~~~~h~~~~~~~tLIghIigs~~~~E~l 87 (190)
T KOG4144|consen 8 KPEAPRIRPGIPESCQRRHTLEASEFPEDERASFEIIRERFISVPEVCPGLFDEIRHFLTLCEGTLIGHIIGSLWDKERL 87 (190)
T ss_pred CcccccCCCCChHHHHHHhccccccCChhHHHHHHHHHHHHhcchhhcchhhhhHHhhhhhccccceehhhcccCcchhh
Confidence 445678999999999999999999997542 2222222222 12211 1222378899988765554431
Q ss_pred ------------CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 167 ------------RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 167 ------------~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
...+|.+++|+|+||.+|+|+.|+..-++....+.-..++.|.+.+ +-+.||++.||+..|-
T Consensus 88 t~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~---pLvPFYEr~gFk~vgp 161 (190)
T KOG4144|consen 88 TQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHD---PLVPFYERFGFKAVGP 161 (190)
T ss_pred hHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecC---CccchhHhcCceeecc
Confidence 4588999999999999999999999988877777534555555544 7899999999998874
No 129
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.41 E-value=8e-07 Score=66.38 Aligned_cols=74 Identities=22% Similarity=0.238 Sum_probs=65.6
Q ss_pred ECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEE
Q psy17026 149 YNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEI 228 (435)
Q Consensus 149 ~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~ 228 (435)
.+|++|.++..... +.+.+-++.|+|||+|+.+.++....+.+.+.| --++.+|.++|..++++.+++||..
T Consensus 6 peG~PVSW~lmdqt------ge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g--~P~Y~hv~~~N~~~~r~~~~lg~~~ 77 (89)
T PF08444_consen 6 PEGNPVSWSLMDQT------GEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLG--FPFYGHVDEDNEASQRLSKSLGFIF 77 (89)
T ss_pred CCCCEeEEEEeccc------ccccccccCHhHhcCCHHHHHHHHHHHHHHHCC--CCeEeehHhccHHHHHHHHHCCCee
Confidence 47889988766544 358899999999999999999999999999999 6789999999999999999999996
Q ss_pred EE
Q psy17026 229 VE 230 (435)
Q Consensus 229 ~~ 230 (435)
..
T Consensus 78 ~p 79 (89)
T PF08444_consen 78 MP 79 (89)
T ss_pred cC
Confidence 54
No 130
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.41 E-value=5.2e-06 Score=61.62 Aligned_cols=71 Identities=18% Similarity=0.256 Sum_probs=56.1
Q ss_pred EEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhC
Q psy17026 145 KLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKF 224 (435)
Q Consensus 145 ~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~ 224 (435)
|.+..+|+.+|++.+.... +...+....|.|++||+|+|+.|+++++++++++| +.+.+..+-+.++++++
T Consensus 2 F~~~~~g~~~a~l~Y~~~~---~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~------~kv~p~C~y~~~~~~~h 72 (78)
T PF14542_consen 2 FELKDDGEEIAELTYREDG---GVIVITHTEVPPELRGQGIAKKLVEAALDYARENG------LKVVPTCSYVAKYFRRH 72 (78)
T ss_dssp EEEESSTTEEEEEEEEESS---SEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-------EEEETSHHHHHHHHH-
T ss_pred EEEEECCEEEEEEEEEeCC---CEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC------CEEEEECHHHHHHHHhC
Confidence 3456678999999986633 57889999999999999999999999999999999 45555556677777654
No 131
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.29 E-value=2.2e-06 Score=64.05 Aligned_cols=74 Identities=22% Similarity=0.238 Sum_probs=64.4
Q ss_pred eCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEE
Q psy17026 319 YNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEI 398 (435)
Q Consensus 319 ~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~ 398 (435)
.+|.+|.++..... +++..-++.|+|||||+.+.++....+.+.++| -.++.+|..+|+.++++..++||..
T Consensus 6 peG~PVSW~lmdqt------ge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g--~P~Y~hv~~~N~~~~r~~~~lg~~~ 77 (89)
T PF08444_consen 6 PEGNPVSWSLMDQT------GEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLG--FPFYGHVDEDNEASQRLSKSLGFIF 77 (89)
T ss_pred CCCCEeEEEEeccc------ccccccccCHhHhcCCHHHHHHHHHHHHHHHCC--CCeEeehHhccHHHHHHHHHCCCee
Confidence 36888887655433 467788999999999999999999999999998 4789999999999999999999997
Q ss_pred Ee
Q psy17026 399 VE 400 (435)
Q Consensus 399 ~~ 400 (435)
..
T Consensus 78 ~p 79 (89)
T PF08444_consen 78 MP 79 (89)
T ss_pred cC
Confidence 65
No 132
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=98.27 E-value=5.7e-06 Score=65.27 Aligned_cols=126 Identities=16% Similarity=0.182 Sum_probs=92.5
Q ss_pred CceEEeeCCcccHHHHHHHhHhcC-Cccc-cHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecC-------------CC
Q psy17026 102 PKIELGDVTPHNIKQLKRLNTVVF-PVSY-NEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPN-------------NG 166 (435)
Q Consensus 102 ~~i~ir~~~~~d~~~l~~l~~~~~-~~~~-~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~-------------~~ 166 (435)
+++.|+.+.+.|..++..|.++.- .-.| ..+.+.....+. +++..+|.+.||+.-..... ..
T Consensus 6 mp~~~~D~~apd~aavLaLNNeha~elswLe~erL~~l~~eA---F~ArR~G~l~afl~tFd~~a~ydSpNFlWFrErYe 82 (167)
T COG3818 6 MPILIRDVRAPDLAAVLALNNEHALELSWLELERLYRLYKEA---FVARRDGNLAAFLVTFDSSARYDSPNFLWFRERYE 82 (167)
T ss_pred cceehhhhcCCchhhHHhccchhhhhccccCHHHHHHHHHHH---HHHhhccchhhheeeccccccCCCCceeehhhhCC
Confidence 567788888889999999866532 1222 333333333322 46666676666554332221 11
Q ss_pred CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEE--cCCHHHHHHHHhCCCEEEEE
Q psy17026 167 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQ--LNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 167 ~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~--~~N~~a~~~y~k~GF~~~~~ 231 (435)
.-.|+..+.|....||+|+|++|.+.+..+|...| ...+.+.|+ ..|+++-.|...+||..+|.
T Consensus 83 ~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~ag-y~~~tCEVn~DppnpasdaFHaalGF~eVG~ 148 (167)
T COG3818 83 NFFYVDRVVVASRARGRGVARALYADLFSYAELAG-YPYLTCEVNLDPPNPASDAFHAALGFHEVGQ 148 (167)
T ss_pred ceEEEEEEEEEecccccchHHHHHHHHHHHHHhcC-CceEEEEecCCCCChHHHHHhhhcCceEccc
Confidence 56889999999999999999999999999999999 888888886 56899999999999999885
No 133
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.26 E-value=1.8e-05 Score=58.69 Aligned_cols=71 Identities=15% Similarity=0.221 Sum_probs=53.1
Q ss_pred EEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhc
Q psy17026 315 KLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKF 394 (435)
Q Consensus 315 ~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~ 394 (435)
|.+..+|+.+|++.+...+ +...+....|.|++||+|+|+.|++.++++++++| .+|...| .-+.++++++
T Consensus 2 F~~~~~g~~~a~l~Y~~~~---~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~--~kv~p~C----~y~~~~~~~h 72 (78)
T PF14542_consen 2 FELKDDGEEIAELTYREDG---GVIVITHTEVPPELRGQGIAKKLVEAALDYARENG--LKVVPTC----SYVAKYFRRH 72 (78)
T ss_dssp EEEESSTTEEEEEEEEESS---SEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT---EEEETS----HHHHHHHHH-
T ss_pred EEEEECCEEEEEEEEEeCC---CEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC--CEEEEEC----HHHHHHHHhC
Confidence 4456678899998887633 67899999999999999999999999999999998 2232222 3455666553
No 134
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=98.11 E-value=1.5e-05 Score=62.91 Aligned_cols=125 Identities=16% Similarity=0.199 Sum_probs=87.0
Q ss_pred EEEEcCCchhHHHHHHHhHhhCC-CCC-CHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecC-------------CCCCe
Q psy17026 274 IELGDVTPHNIKQLKRLNTVVFP-VSY-NEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDP-------------NNGRK 338 (435)
Q Consensus 274 ~~ir~~~~~d~~~~~~l~~~~~~-~~~-~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~-------------~~~~~ 338 (435)
+.++.....|..+++.+.++.-. -.| ..+.+.....+ .|++..+|.+.||+...... .-++.
T Consensus 8 ~~~~D~~apd~aavLaLNNeha~elswLe~erL~~l~~e---AF~ArR~G~l~afl~tFd~~a~ydSpNFlWFrErYe~F 84 (167)
T COG3818 8 ILIRDVRAPDLAAVLALNNEHALELSWLELERLYRLYKE---AFVARRDGNLAAFLVTFDSSARYDSPNFLWFRERYENF 84 (167)
T ss_pred eehhhhcCCchhhHHhccchhhhhccccCHHHHHHHHHH---HHHHhhccchhhheeeccccccCCCCceeehhhhCCce
Confidence 45666666788888887655422 233 33333333321 14666666666665432211 11167
Q ss_pred EEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEE--EEEEcCCHHHHHHHHhcCcEEEeEe
Q psy17026 339 LYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIY--LHVQLNNDVAIDFYKKFGFEIVETK 402 (435)
Q Consensus 339 ~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~--l~v~~~N~~a~~~y~k~GF~~~~~~ 402 (435)
.|+..+.|....||+|+|++|...+.+++...| .-.+. +.....|+++..|...+||.++|+.
T Consensus 85 ~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~ag-y~~~tCEVn~DppnpasdaFHaalGF~eVG~a 149 (167)
T COG3818 85 FYVDRVVVASRARGRGVARALYADLFSYAELAG-YPYLTCEVNLDPPNPASDAFHAALGFHEVGQA 149 (167)
T ss_pred EEEEEEEEEecccccchHHHHHHHHHHHHHhcC-CceEEEEecCCCCChHHHHHhhhcCceEccce
Confidence 899999999999999999999999999999987 54444 5556789999999999999999973
No 135
>KOG2779|consensus
Probab=98.09 E-value=0.00028 Score=65.43 Aligned_cols=278 Identities=12% Similarity=0.136 Sum_probs=160.2
Q ss_pred eEEeeCCcccHHHHHHHh---HhcC--------CccccHHHHHHHHhcCC----eEEEEE--ECCeEEEEEEEEeec---
Q psy17026 104 IELGDVTPHNIKQLKRLN---TVVF--------PVSYNEKFYKDVLEAGE----LAKLAY--YNDIVIGAVCCRIDP--- 163 (435)
Q Consensus 104 i~ir~~~~~d~~~l~~l~---~~~~--------~~~~~~~~~~~~l~~~~----~~~v~~--~~g~iVG~~~~~~~~--- 163 (435)
.....+..+|..++.++. .+-+ .-.|+.+++...+..++ +.+++. ..+++|||++..+..
T Consensus 81 f~W~tldv~~~~~l~el~~lL~enyVEd~~~m~rf~Ys~eFl~Wal~~pg~~~~WHiGVRv~~s~kLVaFIsaiP~~irv 160 (421)
T KOG2779|consen 81 FRWETLDVSDFKDLEELYNLLNENYVEDDDSMFRFDYSPEFLKWALQPPGWKKEWHIGVRVKSSKKLVAFISAIPATIRV 160 (421)
T ss_pred ceeeccCCccHhHHHHHHhhcccCCCCccccchhhhccHHHHHhhhcCCCCccceEEEEEEecCCceEEEEeccccEEEE
Confidence 444555555555555543 3222 23477888888887653 344433 356999999865432
Q ss_pred --CCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEE-E--EEEEcCCHHHHHHHHh-CCCEEEEEeecccc
Q psy17026 164 --NNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSI-Y--LHVQLNNDVAIDFYKK-FGFEIVETKQHYYK 237 (435)
Q Consensus 164 --~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v-~--l~v~~~N~~a~~~y~k-~GF~~~~~~~~~~~ 237 (435)
+....+.|..+||+...|+++++--|++++-..+.-.| +.+. + -.+...+.+.-+.|.+ +..+..-.. . +
T Consensus 161 rdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~g-IfqA~yTaGvvLp~PVstcRY~HRsLNpkKL~dv-~-F- 236 (421)
T KOG2779|consen 161 RDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEG-IFQAAYTAGVVLPKPVSTCRYWHRSLNPKKLIDV-G-F- 236 (421)
T ss_pred ccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhh-hhhHhhhcceeeccccchhhhhhccCChhHeeEe-c-c-
Confidence 22267889999999999999999999999998887776 3221 1 1233444344444332 222211000 0 0
Q ss_pred cCCCCceEEEEeeccccCCCCCCCCCCccccCCCCcEEEEcCCchhHHHHHHHhHhh-----CCCCCCHHHHHHHHhcC-
Q psy17026 238 RIEPADAYVLQKTLRNKVPNGEEHKDGNVFTMTRPKIELGDVTPHNIKQLKRLNTVV-----FPVSYNEKFYKDVLEAG- 311 (435)
Q Consensus 238 ~~~~~d~~~m~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~d~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~- 311 (435)
-.-.+...|++.++.-..+..+. .--+|++++.|.+++.+|...- +...+..+.+..++-..
T Consensus 237 -s~l~~~mTm~rt~klykLP~~~~-----------T~G~R~me~kDvp~V~~Ll~~yl~qf~la~~f~~eev~Hwf~p~e 304 (421)
T KOG2779|consen 237 -SHLSRNMTMQRTIKLYKLPETTK-----------TPGLREMEEKDVPAVFRLLRNYLKQFELAPVFDEEEVEHWFLPRE 304 (421)
T ss_pred -ccccccchHhhhHhhccCCCCCC-----------CCCcccccccchHHHHHHHHHHHHheecccccCHHHhHhhccccc
Confidence 01112333433332211111111 1136999999999999986443 23345666666665422
Q ss_pred --ceEEEEEe-CCEEEEEEEEEecCCCC---------CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEE
Q psy17026 312 --ELAKLAYY-NDIVIGAVCCRIDPNNG---------RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLH 379 (435)
Q Consensus 312 --~~~~v~~~-~~~ivG~~~~~~~~~~~---------~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~ 379 (435)
-..||++. +|+|-+|+.+...+... ..+|++ +.|..+ ---..|++.++-.++..| +.....-
T Consensus 305 ~VV~syVvesp~g~ITDF~SFy~lpsTv~~~~~~ktl~aaYly-Y~v~~~----t~~~~lvnDalilak~~g-fDVFNAl 378 (421)
T KOG2779|consen 305 NVVYSYVVESPNGKITDFCSFYSLPSTVMGNPKYKTLQAAYLY-YNVATS----TPLLQLVNDALILAKQKG-FDVFNAL 378 (421)
T ss_pred ceEEEEEEECCCCcccceeeEEeccccccCCCCcceeeeeeEE-EeccCC----ccHHHHHHHHHHHHHhcC-Cceeehh
Confidence 23456665 78899988876655311 445554 222222 125678888888899888 6655544
Q ss_pred EEcCCHHHHHHHHhcCcEEEeEeeccc
Q psy17026 380 VQLNNDVAIDFYKKFGFEIVETKQHYY 406 (435)
Q Consensus 380 v~~~N~~a~~~y~k~GF~~~~~~~~~y 406 (435)
..-+| ..|+++++|-+-.-.-.||
T Consensus 379 d~meN---~~fl~~LkFg~GdG~l~YY 402 (421)
T KOG2779|consen 379 DLMEN---ESFLKDLKFGPGDGNLQYY 402 (421)
T ss_pred hhhhh---hhHHHhcCcCcCCCceeEE
Confidence 44434 3599999998865545553
No 136
>KOG4135|consensus
Probab=98.05 E-value=0.00023 Score=57.75 Aligned_cols=131 Identities=15% Similarity=0.164 Sum_probs=88.5
Q ss_pred CCceEEeeCCcccHHHHHHHhHh------cCCccccHH-HH--HHHHh--cCCeEEEEEEC-----C-----eEEEEEEE
Q psy17026 101 RPKIELGDVTPHNIKQLKRLNTV------VFPVSYNEK-FY--KDVLE--AGELAKLAYYN-----D-----IVIGAVCC 159 (435)
Q Consensus 101 ~~~i~ir~~~~~d~~~l~~l~~~------~~~~~~~~~-~~--~~~l~--~~~~~~v~~~~-----g-----~iVG~~~~ 159 (435)
...+.+.|.++...+..+.+... .-..+.+.+ .+ ..... .+..-|++.+. + -.||=+-+
T Consensus 11 ~~kvILVPYe~~HV~kYHeWMknEelr~LT~SE~LtLdeEyeMQ~sW~~DeDKlTFIVLdaE~~ea~~~ev~~MvGDvNl 90 (185)
T KOG4135|consen 11 GKKVILVPYEPCHVPKYHEWMKNEELRRLTASEPLTLDEEYEMQKSWREDEDKLTFIVLDAEMNEAGEDEVDHMVGDVNL 90 (185)
T ss_pred cceEEEeeccccchhHHHhHhhhHHHHHhhcCCCcchhHHHHhhhhhccCCcceEEEEEechhcccCchhHhhhccceee
Confidence 44567788888887777765211 112333321 11 11111 23344444321 1 26776665
Q ss_pred EeecCCC--------CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 160 RIDPNNG--------RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 160 ~~~~~~~--------~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
....... ..+.+.-+.-.|..||+|+|+..+.+++.++....++.+..+.+..+|.+++++|+|++|....+
T Consensus 91 Flt~~~~~~n~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~ 170 (185)
T KOG4135|consen 91 FLTTSPDTENPSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFY 170 (185)
T ss_pred EEecCCCcCCcccceeeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeeee
Confidence 5443322 35667777889999999999999999999999876688999999999999999999999997765
No 137
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=97.99 E-value=0.00015 Score=75.14 Aligned_cols=119 Identities=16% Similarity=0.175 Sum_probs=84.5
Q ss_pred HHHHHHHHhcC-ceEEEEEeCC-EEEEEEEEEecCCC---------------C-------------------CeEEEEEE
Q psy17026 301 EKFYKDVLEAG-ELAKLAYYND-IVIGAVCCRIDPNN---------------G-------------------RKLYIMTL 344 (435)
Q Consensus 301 ~~~~~~~~~~~-~~~~v~~~~~-~ivG~~~~~~~~~~---------------~-------------------~~~~i~~i 344 (435)
+..+...++.+ ..++++..++ .+|+.+.+...+.. + ....|..|
T Consensus 458 P~DL~~L~DaP~h~~~al~~~~~~~va~~qva~EG~l~~~~i~~~~~g~r~~GnlIp~~l~~~~~~~~fa~l~G~RIvRI 537 (758)
T COG1444 458 PNDLRRLLDAPHHHIFALRAPEGKPVAVWQVAEEGGLSDELIDIWLGGRRPRGNLIPDLLAKHHRDPEFAKLVGWRIVRI 537 (758)
T ss_pred HHHHHHHhcCCCCeeEEEEcCCCceEEEEEeeccCCCcHHHHHHHhcCCCCCCcccHHHHHHhhcchhhcccceeeEEEE
Confidence 45566666644 4556666555 77777666544432 0 45678899
Q ss_pred EECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccccccccceeeeeecccC
Q psy17026 345 GCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRN 423 (435)
Q Consensus 345 ~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~~~~m~~~l~~ 423 (435)
+|+|++|++|||++|++.+++++.+ + +.-+... +..+....+|+.|+||.++....+. ++.++..+.+|-|-|+.
T Consensus 538 AvhPe~q~~GiGsrlL~~l~~~a~~-~-~Dwlgvs-FG~t~~L~rFW~rnGF~pVhls~~r-n~~SGeys~i~lkpLs~ 612 (758)
T COG1444 538 AVHPELQRMGIGSRLLALLIEEARK-G-LDWLGVS-FGYTEELLRFWLRNGFVPVHLSPTR-NASSGEYTAIVLKPLSD 612 (758)
T ss_pred EeCHHHHhcCHHHHHHHHHHHHHhc-C-CCEEeec-cCCCHHHHHHHHHcCeEEEEecCcc-CcCCCceeEEEEecCCH
Confidence 9999999999999999999999973 3 4444333 3445579999999999999875544 33467778888887763
No 138
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=97.87 E-value=0.00026 Score=73.46 Aligned_cols=100 Identities=17% Similarity=0.210 Sum_probs=74.1
Q ss_pred cHHHHHHHHhcCC-eEEEEEECC-eEEEEEEEEeecCC---------------C-------------------CeEEEEE
Q psy17026 130 NEKFYKDVLEAGE-LAKLAYYND-IVIGAVCCRIDPNN---------------G-------------------RKLYIMT 173 (435)
Q Consensus 130 ~~~~~~~~l~~~~-~~~v~~~~g-~iVG~~~~~~~~~~---------------~-------------------~~~~i~~ 173 (435)
++..+..+++.+. ..+++..++ ++|+.+.+...+.. + ...-|..
T Consensus 457 sP~DL~~L~DaP~h~~~al~~~~~~~va~~qva~EG~l~~~~i~~~~~g~r~~GnlIp~~l~~~~~~~~fa~l~G~RIvR 536 (758)
T COG1444 457 SPNDLRRLLDAPHHHIFALRAPEGKPVAVWQVAEEGGLSDELIDIWLGGRRPRGNLIPDLLAKHHRDPEFAKLVGWRIVR 536 (758)
T ss_pred CHHHHHHHhcCCCCeeEEEEcCCCceEEEEEeeccCCCcHHHHHHHhcCCCCCCcccHHHHHHhhcchhhcccceeeEEE
Confidence 5667777777654 455666555 88888887766543 0 3466999
Q ss_pred EEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEe
Q psy17026 174 LGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETK 232 (435)
Q Consensus 174 l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~ 232 (435)
|+|+|++|++|||++|++.+.+++++ | +.-+.... -.++.-.+||.|+||.++..-
T Consensus 537 IAvhPe~q~~GiGsrlL~~l~~~a~~-~-~DwlgvsF-G~t~~L~rFW~rnGF~pVhls 592 (758)
T COG1444 537 IAVHPELQRMGIGSRLLALLIEEARK-G-LDWLGVSF-GYTEELLRFWLRNGFVPVHLS 592 (758)
T ss_pred EEeCHHHHhcCHHHHHHHHHHHHHhc-C-CCEEeecc-CCCHHHHHHHHHcCeEEEEec
Confidence 99999999999999999999999973 3 44443332 345688999999999988653
No 139
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.81 E-value=7.8e-05 Score=69.41 Aligned_cols=113 Identities=19% Similarity=0.220 Sum_probs=79.0
Q ss_pred cHHHHHHHhHhcCCcccc--HHHHHHHHhcCCeEEEEEECCeEEEEEEEEee-----cCCCCeEEEEEEEeCCCccCCCH
Q psy17026 113 NIKQLKRLNTVVFPVSYN--EKFYKDVLEAGELAKLAYYNDIVIGAVCCRID-----PNNGRKLYIMTLGCLSPYRRLGI 185 (435)
Q Consensus 113 d~~~l~~l~~~~~~~~~~--~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~-----~~~~~~~~i~~l~V~p~~rg~Gi 185 (435)
...++..+.+..+..+.. +...-..+-.....+|++++.++++-+.+.+. ....+...|..+++.|+|||+|.
T Consensus 8 s~kE~i~~~s~~~~k~~~~~~~~~f~kil~~~n~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~ 87 (389)
T COG4552 8 SFKEFIGLESYAFWKPLVPTDGAVFVKILAEPNSYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGA 87 (389)
T ss_pred chHHHHhHHHHHhcCccccchhhhhhhhccCCcceEEeehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcH
Confidence 334445554444444432 22222222234457888899998886654311 11116678999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 186 GSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 186 G~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
.++|+.+.++..+++| +....|+- .+.+||+|.||...+.
T Consensus 88 ~~~Ll~~sLre~~~kG-~p~s~L~P-----~s~~iYrKfGye~asn 127 (389)
T COG4552 88 LRALLAHSLREIARKG-YPVSALHP-----FSGGIYRKFGYEYASN 127 (389)
T ss_pred HHHHHHHHHHHHHHcC-CeeEEecc-----CchhhHhhccccccce
Confidence 9999999999999999 77666664 5589999999998776
No 140
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.77 E-value=9.7e-05 Score=68.79 Aligned_cols=87 Identities=21% Similarity=0.290 Sum_probs=66.7
Q ss_pred CceEEEEEeCCEEEEEEEEEe-----cCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCH
Q psy17026 311 GELAKLAYYNDIVIGAVCCRI-----DPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNND 385 (435)
Q Consensus 311 ~~~~~v~~~~~~ivG~~~~~~-----~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~ 385 (435)
....+++..+.++++-+...+ ....-.+..|..+++.|+|||+|..++||.+.++..+++| +-...|+.
T Consensus 38 ~~n~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG-~p~s~L~P----- 111 (389)
T COG4552 38 EPNSYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKG-YPVSALHP----- 111 (389)
T ss_pred CCcceEEeehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcC-CeeEEecc-----
Confidence 445678888888877654331 1112267789999999999999999999999999999999 55444444
Q ss_pred HHHHHHHhcCcEEEeEee
Q psy17026 386 VAIDFYKKFGFEIVETKQ 403 (435)
Q Consensus 386 ~a~~~y~k~GF~~~~~~~ 403 (435)
.+.++|+|+||+..+...
T Consensus 112 ~s~~iYrKfGye~asn~~ 129 (389)
T COG4552 112 FSGGIYRKFGYEYASNYH 129 (389)
T ss_pred CchhhHhhccccccceEE
Confidence 567899999999887633
No 141
>KOG4135|consensus
Probab=97.76 E-value=0.00019 Score=58.24 Aligned_cols=65 Identities=20% Similarity=0.232 Sum_probs=57.5
Q ss_pred CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 337 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 337 ~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
-.+++.-+.-.|.-||||+|+.++.+++.|+.+.-++....+-+..+|++++++|+|++|..+..
T Consensus 106 ~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~ 170 (185)
T KOG4135|consen 106 ITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFY 170 (185)
T ss_pred eeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeeee
Confidence 45677777778899999999999999999998864488899999999999999999999998775
No 142
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.74 E-value=0.00011 Score=56.66 Aligned_cols=60 Identities=18% Similarity=0.120 Sum_probs=52.7
Q ss_pred cCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcC
Q psy17026 140 AGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 201 (435)
Q Consensus 140 ~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g 201 (435)
.....+++.++|+.+|++.....+.. ...|...+|.+++||+|+|+.|+.++++.+++.|
T Consensus 13 ~~~~~y~~~~~G~~~~e~~y~~~~~~--~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g 72 (99)
T COG2388 13 GENGRYVLTDEGEVIGEATYYDRGEN--LIIIDHTYVPDELRGQGIAQKLVEKALEEAREAG 72 (99)
T ss_pred cCceEEEEecCCcEEEEEEEecCCCC--EEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcC
Confidence 34567888899999999988777653 5788999999999999999999999999999999
No 143
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.72 E-value=0.00052 Score=62.31 Aligned_cols=81 Identities=12% Similarity=0.238 Sum_probs=68.4
Q ss_pred eEEEEEE-CCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHH
Q psy17026 143 LAKLAYY-NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY 221 (435)
Q Consensus 143 ~~~v~~~-~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y 221 (435)
...+++. ++++|++.++.-+. |-.++|+|.+||-|+.-+|+.++++.+-+.| ...+++.+.. ...+||
T Consensus 37 ~~v~~~~~~~~iiacGsiaGnv-------ikcvAvs~s~qGeGl~lkl~TeLin~ay~~g-~~hLFiyTKp---~~~~lF 105 (352)
T COG3053 37 YFVAIYRDNEEIIACGSIAGNV-------IKCVAVSESLQGEGLALKLVTELINLAYERG-RTHLFIYTKP---EYAALF 105 (352)
T ss_pred EEEEEEcCCCcEEEecccccce-------eEEEEechhcccccHHHHHHHHHHHHHHHcC-CceEEEEech---hHHHHH
Confidence 4445555 59999998876543 7889999999999999999999999999999 9999999887 557999
Q ss_pred HhCCCEEEEEeec
Q psy17026 222 KKFGFEIVETKQH 234 (435)
Q Consensus 222 ~k~GF~~~~~~~~ 234 (435)
+.+||........
T Consensus 106 k~~GF~~i~~~~~ 118 (352)
T COG3053 106 KQCGFSEIASAEN 118 (352)
T ss_pred HhCCceEeeccCc
Confidence 9999998876443
No 144
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.63 E-value=0.0002 Score=55.12 Aligned_cols=60 Identities=17% Similarity=0.101 Sum_probs=51.8
Q ss_pred cCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcC
Q psy17026 310 AGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 371 (435)
Q Consensus 310 ~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g 371 (435)
....++++..+|..+|++....... +...|....|.+++||||+|++|+..+++.+++.|
T Consensus 13 ~~~~~y~~~~~G~~~~e~~y~~~~~--~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g 72 (99)
T COG2388 13 GENGRYVLTDEGEVIGEATYYDRGE--NLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAG 72 (99)
T ss_pred cCceEEEEecCCcEEEEEEEecCCC--CEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcC
Confidence 3556788888999999887766654 45789999999999999999999999999999998
No 145
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.52 E-value=0.00063 Score=61.75 Aligned_cols=77 Identities=12% Similarity=0.229 Sum_probs=65.0
Q ss_pred EeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcE
Q psy17026 318 YYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFE 397 (435)
Q Consensus 318 ~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~ 397 (435)
.+++++|++..+.-. -|..++|++.+||-|++-+|+.++++.+.+.| ..++++.+-+ ...++|+.+||.
T Consensus 43 ~~~~~iiacGsiaGn-------vikcvAvs~s~qGeGl~lkl~TeLin~ay~~g-~~hLFiyTKp---~~~~lFk~~GF~ 111 (352)
T COG3053 43 RDNEEIIACGSIAGN-------VIKCVAVSESLQGEGLALKLVTELINLAYERG-RTHLFIYTKP---EYAALFKQCGFS 111 (352)
T ss_pred cCCCcEEEecccccc-------eeEEEEechhcccccHHHHHHHHHHHHHHHcC-CceEEEEech---hHHHHHHhCCce
Confidence 345899997655322 38899999999999999999999999999999 8888888877 567899999999
Q ss_pred EEeEeecc
Q psy17026 398 IVETKQHY 405 (435)
Q Consensus 398 ~~~~~~~~ 405 (435)
........
T Consensus 112 ~i~~~~~~ 119 (352)
T COG3053 112 EIASAENV 119 (352)
T ss_pred EeeccCce
Confidence 98776555
No 146
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.47 E-value=0.0039 Score=54.44 Aligned_cols=134 Identities=16% Similarity=0.197 Sum_probs=99.3
Q ss_pred eEEeeCC-cccHHHHHHHhHhcCCcc----ccHHHHHHHHhcCCeEEEEEECC-eEEEEEEEEeecCCC-CeEEEEEEEe
Q psy17026 104 IELGDVT-PHNIKQLKRLNTVVFPVS----YNEKFYKDVLEAGELAKLAYYND-IVIGAVCCRIDPNNG-RKLYIMTLGC 176 (435)
Q Consensus 104 i~ir~~~-~~d~~~l~~l~~~~~~~~----~~~~~~~~~l~~~~~~~v~~~~g-~iVG~~~~~~~~~~~-~~~~i~~l~V 176 (435)
+.+|.++ +.++..+..+...+|... .....+...-..+...+.++.++ ++||...-.+..... ...|-..++|
T Consensus 3 vvvrrl~dp~el~~~~dV~~~aWg~~d~~~~~~d~i~al~~~GGlvlgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV 82 (266)
T COG3375 3 VVVRRLTDPAELDEAEDVQASAWGSEDRDGAPADTIRALRYHGGLVLGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGV 82 (266)
T ss_pred eeEEecCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHhcCCeEEEEEcCCCcEEEEEeccCCcCCCceeeeeeehhc
Confidence 4556665 677888888877777533 22344444444567788888755 999987666622122 2456678999
Q ss_pred CCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHH-HHhCCCEEEEEeeccccc
Q psy17026 177 LSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDF-YKKFGFEIVETKQHYYKR 238 (435)
Q Consensus 177 ~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~-y~k~GF~~~~~~~~~~~~ 238 (435)
.|++++.|+|-+|=..--+.+..+| +..+.++..+-|.-.-.| ..|+|-...-.+.+||..
T Consensus 83 ~e~~k~sglg~aLK~~Qre~a~~~G-~tli~WTfDPl~alNA~fNi~KLGa~artYi~nfYg~ 144 (266)
T COG3375 83 REEVKGSGLGVALKMKQRERALSMG-YTLIAWTFDPLNALNARFNISKLGAIARTYIKNFYGE 144 (266)
T ss_pred cccccccchhhhhHHHHHHHHHhcC-eeeEEEecccchhhhhhcchhhhceeEEEeeccccch
Confidence 9999999999999999999999999 999999988887554555 678998888888888853
No 147
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=97.39 E-value=0.0051 Score=59.38 Aligned_cols=130 Identities=11% Similarity=0.144 Sum_probs=92.2
Q ss_pred CcEEEEcCCchhHHHHHHHhHhhCC----CCCCHHHHHHHHh---cCceEEEEE-eCCEEEEEEEEEecCCCCCeEEEEE
Q psy17026 272 PKIELGDVTPHNIKQLKRLNTVVFP----VSYNEKFYKDVLE---AGELAKLAY-YNDIVIGAVCCRIDPNNGRKLYIMT 343 (435)
Q Consensus 272 ~~~~ir~~~~~d~~~~~~l~~~~~~----~~~~~~~~~~~~~---~~~~~~v~~-~~~~ivG~~~~~~~~~~~~~~~i~~ 343 (435)
.+++++. .+|++.+.++...... ...+.++++...+ +...++++. .+|++||.+.+....+. .+...
T Consensus 150 ~Gv~v~~--~~~l~~F~~l~~~t~~r~g~p~~~~~~f~~l~~~~~~~~~l~~a~~~~g~~va~~l~~~~~~~---~~~~~ 224 (330)
T TIGR03019 150 AGLTVTV--DGDLDRFYDVYAENMRDLGTPVFSRRYFRLLKDVFGEDCEVLTVRLGDGVVASAVLSFYFRDE---VLPYY 224 (330)
T ss_pred CCeEEEE--CCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhcccCEEEEEEEeCCCCEEEEEEEEEeCCE---EEEEe
Confidence 3456654 3457888777654331 2356777766654 333455667 68999988766655432 33334
Q ss_pred EEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecccc
Q psy17026 344 LGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYK 407 (435)
Q Consensus 344 i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~ 407 (435)
.+..++++..+-+..|+-.+++++.++| +....+.....+....+|-+++||+.+...-.|+.
T Consensus 225 ~g~~~~~~~~~~~~lL~w~~i~~a~~~G-~~~fDfG~s~~~~G~~~FK~~~G~~~~~l~~~~~~ 287 (330)
T TIGR03019 225 AGGLREARDVAANDLMYWELMRRACERG-LRVFDFGRSKRGTGPFKFKKNWGFEPQPLHYEYLL 287 (330)
T ss_pred ccChHHHHhhChHHHHHHHHHHHHHHCC-CcEEEcCCCCCCCccHHHHhcCCCeeccceEEEEc
Confidence 5678999999999999999999999999 99888876665667778888999999887666653
No 148
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=97.37 E-value=0.0014 Score=51.24 Aligned_cols=82 Identities=16% Similarity=0.076 Sum_probs=62.9
Q ss_pred CCeEEEEEECCeEEEEEEEEeecCCC--CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHH
Q psy17026 141 GELAKLAYYNDIVIGAVCCRIDPNNG--RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAI 218 (435)
Q Consensus 141 ~~~~~v~~~~g~iVG~~~~~~~~~~~--~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~ 218 (435)
....|...-+|.+|||+.+-...... -...+..+++...|||+|+|++..+++...+. | .-.+.+...|.+|+
T Consensus 36 ~~~~~~~~~~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~--g---~w~Va~i~EN~PA~ 110 (143)
T COG5628 36 VREAWLFRIGGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW--G---VWQVATVRENTPAR 110 (143)
T ss_pred ccceeEEEECCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHhh--c---eEEEEEeccCChhH
Confidence 34467778899999999876544332 23457889999999999999999999876654 3 34556778899999
Q ss_pred HHHHhCCCE
Q psy17026 219 DFYKKFGFE 227 (435)
Q Consensus 219 ~~y~k~GF~ 227 (435)
.|+++.-..
T Consensus 111 ~fwK~~~~t 119 (143)
T COG5628 111 AFWKRVAET 119 (143)
T ss_pred HHHHhhhcc
Confidence 999987654
No 149
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.26 E-value=0.00043 Score=54.70 Aligned_cols=44 Identities=43% Similarity=0.714 Sum_probs=41.2
Q ss_pred EEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCC
Q psy17026 174 LGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGF 226 (435)
Q Consensus 174 l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF 226 (435)
++|+|++||+|+|+.|++++++.++..| +. .|..+..+|.+.||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g-~~--------~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRG-IS--------LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcC-ce--------ehHHHHHHHHhcCC
Confidence 9999999999999999999999999988 44 77799999999999
No 150
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=97.26 E-value=0.0084 Score=56.93 Aligned_cols=124 Identities=14% Similarity=0.106 Sum_probs=72.1
Q ss_pred ceEEeeCCcccHHHHHHHhHhcCC--ccc--cH-----------HHHHHHH-h---cCCeEEEEEE--CCeEEEEEEEEe
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVVFP--VSY--NE-----------KFYKDVL-E---AGELAKLAYY--NDIVIGAVCCRI 161 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~~~--~~~--~~-----------~~~~~~l-~---~~~~~~v~~~--~g~iVG~~~~~~ 161 (435)
|+.||+++.+|+++|.+|....-+ ... +. ..|.... . +..+.+|.++ .|+|||++++..
T Consensus 1 M~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a 80 (342)
T PF04958_consen 1 MLVIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEA 80 (342)
T ss_dssp -EEEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEES
T ss_pred CeEEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEe
Confidence 578999999999999999776543 121 22 2222111 1 1225667776 699999999865
Q ss_pred ecCC----------------------------------CCeEEEEEEEeCCCccCCCHHHHHHHHHH---HHHHhcCCcc
Q psy17026 162 DPNN----------------------------------GRKLYIMTLGCLSPYRRLGIGSMMLEHIL---NYVEKDGNFD 204 (435)
Q Consensus 162 ~~~~----------------------------------~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~---~~a~~~g~~~ 204 (435)
.-.. .....++.++++|+||+.|.|+.|-+.-. ...++.- ..
T Consensus 81 ~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~rF-~~ 159 (342)
T PF04958_consen 81 AVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRERF-AD 159 (342)
T ss_dssp STTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGGS--S
T ss_pred ccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhhc-ch
Confidence 4431 15677999999999999999998877653 3334444 46
Q ss_pred EEEEEEEc--CCHHHHHHHHhCCCE
Q psy17026 205 SIYLHVQL--NNDVAIDFYKKFGFE 227 (435)
Q Consensus 205 ~v~l~v~~--~N~~a~~~y~k~GF~ 227 (435)
++...... +-.+--.||+.+|=.
T Consensus 160 ~viAElrG~~De~G~SPFWdalG~~ 184 (342)
T PF04958_consen 160 RVIAELRGVSDEDGRSPFWDALGRH 184 (342)
T ss_dssp EEEEE--B---TT---HHHHHTGGG
T ss_pred heeeeccCCcCCCCCCchHHHhhcc
Confidence 66665431 222556899998844
No 151
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.17 E-value=0.011 Score=48.93 Aligned_cols=97 Identities=14% Similarity=0.234 Sum_probs=72.5
Q ss_pred CchhHHHHHHHhHhhC-------CCCCCHHHHHHHHhc-----CceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEEC
Q psy17026 280 TPHNIKQLKRLNTVVF-------PVSYNEKFYKDVLEA-----GELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCL 347 (435)
Q Consensus 280 ~~~d~~~~~~l~~~~~-------~~~~~~~~~~~~~~~-----~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~ 347 (435)
++++++.+.++....+ ..++....+...+.. ....+++..+|++||+..+.... ...+....+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~g~~va~~~~~~~~---~~~~~~~~g~~ 103 (142)
T PF13480_consen 27 DPADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLYDGGEPVAFALGFRHG---GTLYYWYGGYD 103 (142)
T ss_pred CHHHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEEECCEEEEEEEEEEEC---CEEEEEEEEEC
Confidence 5667777777764332 233445555555542 24566778899999998877776 45778888999
Q ss_pred CCcccCChHHHHHHHHHHHHHHcCCccEEEEEE
Q psy17026 348 SPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHV 380 (435)
Q Consensus 348 p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v 380 (435)
|+++..+.|..|+..+++++.++| +..+.+..
T Consensus 104 ~~~~~~~~~~~l~~~~i~~a~~~g-~~~~d~g~ 135 (142)
T PF13480_consen 104 PEYRKYSPGRLLLWEAIRWAIERG-LRYFDFGG 135 (142)
T ss_pred HhhHhCCHHHHHHHHHHHHHHHCC-CCEEEECC
Confidence 999999999999999999999999 87776654
No 152
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=97.16 E-value=0.0061 Score=53.17 Aligned_cols=119 Identities=12% Similarity=0.111 Sum_probs=83.9
Q ss_pred CCcccHHHHHHHhHhcCCc--cccHH-----HHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCC---------------
Q psy17026 109 VTPHNIKQLKRLNTVVFPV--SYNEK-----FYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNG--------------- 166 (435)
Q Consensus 109 ~~~~d~~~l~~l~~~~~~~--~~~~~-----~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~--------------- 166 (435)
+..++++++.++...+|-. .|+.. ++.++-.....++++.++|+++|++-+.+.....
T Consensus 5 ~~~~~l~~~~rlR~~vFv~rlgW~v~~~dg~E~DqyD~~~~~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~ 84 (182)
T PF00765_consen 5 LSRRLLEEMFRLRHRVFVDRLGWDVPCEDGMEIDQYDDPDAVYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPA 84 (182)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCCCHHCCTSEE--TTGCTT-EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS--
T ss_pred cCHHHHHHHHHHHHHHHHHhhCCCCcCCCCcEeeecCCCCCeEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCC
Confidence 3456778888888888753 35422 2222333345677788899999999887655421
Q ss_pred ----CeEEEEEEEeCCCccC------CCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 167 ----RKLYIMTLGCLSPYRR------LGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 167 ----~~~~i~~l~V~p~~rg------~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
....+..++|+|+.++ .-+...|+..+.++|.++| +..+...+.. ...++++++||.....
T Consensus 85 p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~g-i~~~v~V~~~---~~~r~l~r~G~~~~~l 155 (182)
T PF00765_consen 85 PRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNG-IRHIVGVVDP---AMERILRRAGWPVRRL 155 (182)
T ss_dssp -SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT--SEEEEEEEH---HHHHHHHHCT-EEEES
T ss_pred CCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCC-CCEEEEEECh---HHHHHHHHcCCceEEC
Confidence 5688999999998532 2467899999999999999 9999888866 8899999999997653
No 153
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.14 E-value=0.00067 Score=53.53 Aligned_cols=44 Identities=43% Similarity=0.714 Sum_probs=40.9
Q ss_pred EEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCc
Q psy17026 344 LGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGF 396 (435)
Q Consensus 344 i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF 396 (435)
++|+|++||+|+|+.|++.+++++...+ +. .|..+..+|.+.||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g-~~--------~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRG-IS--------LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcC-ce--------ehHHHHHHHHhcCC
Confidence 9999999999999999999999999988 43 77789999999999
No 154
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=97.11 E-value=0.0071 Score=47.37 Aligned_cols=83 Identities=16% Similarity=0.077 Sum_probs=59.7
Q ss_pred cCceEEEEEeCCEEEEEEEEEecCCCC--CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHH
Q psy17026 310 AGELAKLAYYNDIVIGAVCCRIDPNNG--RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVA 387 (435)
Q Consensus 310 ~~~~~~v~~~~~~ivG~~~~~~~~~~~--~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a 387 (435)
+....+++..+|.+|||+.+....... --.-+..+.+..+|||+|+|++....+-...+ | ...+-+...|.+|
T Consensus 35 ~~~~~~~~~~~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~--g---~w~Va~i~EN~PA 109 (143)
T COG5628 35 PVREAWLFRIGGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW--G---VWQVATVRENTPA 109 (143)
T ss_pred cccceeEEEECCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHhh--c---eEEEEEeccCChh
Confidence 344567777799999998765333221 22347778899999999999999888755443 3 3456677889999
Q ss_pred HHHHHhcCcE
Q psy17026 388 IDFYKKFGFE 397 (435)
Q Consensus 388 ~~~y~k~GF~ 397 (435)
++++++.=+.
T Consensus 110 ~~fwK~~~~t 119 (143)
T COG5628 110 RAFWKRVAET 119 (143)
T ss_pred HHHHHhhhcc
Confidence 9999987543
No 155
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.05 E-value=0.015 Score=48.16 Aligned_cols=97 Identities=15% Similarity=0.276 Sum_probs=73.4
Q ss_pred CcccHHHHHHHhHhcC-------CccccHHHHHHHHhc----CC-eEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeC
Q psy17026 110 TPHNIKQLKRLNTVVF-------PVSYNEKFYKDVLEA----GE-LAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCL 177 (435)
Q Consensus 110 ~~~d~~~l~~l~~~~~-------~~~~~~~~~~~~l~~----~~-~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~ 177 (435)
.++|++.+.++....+ ..+.+.+++...+.. +. ..+++..+|++||+..+..... ..+.....++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~g~~va~~~~~~~~~---~~~~~~~g~~ 103 (142)
T PF13480_consen 27 DPADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLYDGGEPVAFALGFRHGG---TLYYWYGGYD 103 (142)
T ss_pred CHHHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEEECCEEEEEEEEEEECC---EEEEEEEEEC
Confidence 5778888887754332 234556666666553 22 4567788999999987777664 4677788889
Q ss_pred CCccCCCHHHHHHHHHHHHHHhcCCccEEEEEE
Q psy17026 178 SPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHV 210 (435)
Q Consensus 178 p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v 210 (435)
|+++..+.|..|+..++++|.+.| +..+.+..
T Consensus 104 ~~~~~~~~~~~l~~~~i~~a~~~g-~~~~d~g~ 135 (142)
T PF13480_consen 104 PEYRKYSPGRLLLWEAIRWAIERG-LRYFDFGG 135 (142)
T ss_pred HhhHhCCHHHHHHHHHHHHHHHCC-CCEEEECC
Confidence 999999999999999999999999 87777654
No 156
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.03 E-value=0.016 Score=50.72 Aligned_cols=132 Identities=14% Similarity=0.167 Sum_probs=89.9
Q ss_pred EEEcC-CchhHHHHHHHhHhhCCCCC----CHHHHHHHHhcCceEEEEEeCC-EEEEEEEEEecC-CCCCeEEEEEEEEC
Q psy17026 275 ELGDV-TPHNIKQLKRLNTVVFPVSY----NEKFYKDVLEAGELAKLAYYND-IVIGAVCCRIDP-NNGRKLYIMTLGCL 347 (435)
Q Consensus 275 ~ir~~-~~~d~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~-~ivG~~~~~~~~-~~~~~~~i~~i~V~ 347 (435)
.+|.+ .+.+++++.++....+...- ....+......+..+.-++.++ ++||.+.-.+.. ...-..|-..++|.
T Consensus 4 vvrrl~dp~el~~~~dV~~~aWg~~d~~~~~~d~i~al~~~GGlvlgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV~ 83 (266)
T COG3375 4 VVRRLTDPAELDEAEDVQASAWGSEDRDGAPADTIRALRYHGGLVLGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGVR 83 (266)
T ss_pred eEEecCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHhcCCeEEEEEcCCCcEEEEEeccCCcCCCceeeeeeehhcc
Confidence 34555 45678888888777665432 2344444444677777787755 999987655522 12135666779999
Q ss_pred CCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHH-HhcCcEEEeEeecccc
Q psy17026 348 SPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY-KKFGFEIVETKQHYYK 407 (435)
Q Consensus 348 p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y-~k~GF~~~~~~~~~y~ 407 (435)
|++++.|+|-+|-..--+++.++| ++.+..+-++-|.-...|- -|+|-...--..+||.
T Consensus 84 e~~k~sglg~aLK~~Qre~a~~~G-~tli~WTfDPl~alNA~fNi~KLGa~artYi~nfYg 143 (266)
T COG3375 84 EEVKGSGLGVALKMKQRERALSMG-YTLIAWTFDPLNALNARFNISKLGAIARTYIKNFYG 143 (266)
T ss_pred ccccccchhhhhHHHHHHHHHhcC-eeeEEEecccchhhhhhcchhhhceeEEEeeccccc
Confidence 999999999999999999999999 8888877777654322332 3666655555666664
No 157
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=96.98 E-value=0.021 Score=55.36 Aligned_cols=241 Identities=14% Similarity=0.137 Sum_probs=146.7
Q ss_pred eEEEEEECCeEEEEEEEEeecCCC-------------------------------CeEEEEEEEeCCCccCCCHHHHHHH
Q psy17026 143 LAKLAYYNDIVIGAVCCRIDPNNG-------------------------------RKLYIMTLGCLSPYRRLGIGSMMLE 191 (435)
Q Consensus 143 ~~~v~~~~g~iVG~~~~~~~~~~~-------------------------------~~~~i~~l~V~p~~rg~GiG~~Ll~ 191 (435)
..+++.++|++||.+-+......- +.. =..+.++|......+...|++
T Consensus 45 ~hl~~~~~~~lvaa~P~YlK~hS~GEyvFD~~Wa~a~~r~g~~YYPKlv~avPfTPv~-G~R~l~~~~~~~~~~~~~L~~ 123 (370)
T PF04339_consen 45 RHLTLRDGGRLVAAAPLYLKSHSYGEYVFDWAWADAYQRAGLRYYPKLVGAVPFTPVT-GPRLLIAPGADRAALRAALLQ 123 (370)
T ss_pred eEEEEEECCEEEEEeeeeeecccCcceehhHHHHHHHHHhccccCcceEeeeCCCCCc-ccceeECCCCCHHHHHHHHHH
Confidence 467888999999999887665421 111 125667888888889999999
Q ss_pred HHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCC--CceEEEEeeccccCCC--CCCCCCCccc
Q psy17026 192 HILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEP--ADAYVLQKTLRNKVPN--GEEHKDGNVF 267 (435)
Q Consensus 192 ~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~--~d~~~m~~~l~~~~~~--~~~~~~~~~~ 267 (435)
.+.+.+.+.| +..+-+.. .++.-....+..||....-....+.+... .|.+.-. |+..... ..+. -
T Consensus 124 ~~~~~a~~~~-~Ss~h~lF--~~~~~~~~l~~~G~~~r~~~qf~W~N~gy~~FDdfLa~--Lss~kRk~IRrER-----r 193 (370)
T PF04339_consen 124 ALEQLAEENG-LSSWHILF--PDEEDAAALEEAGFLSRQGVQFHWHNRGYRSFDDFLAA--LSSRKRKNIRRER-----R 193 (370)
T ss_pred HHHHHHHHcC-CCcceeec--CCHHHHHHHHhCCCceecCCceEEecCCCCCHHHHHHH--hchhhHHHHHHHH-----H
Confidence 9999999998 77665543 33455677889999865433322322111 1221110 0000000 0000 0
Q ss_pred cCCCCcEEEEc-----CCchhHHHHHHHhHhhCCCCCC-----HHHHHHHHh---cCceEEEEEeCCEEEEEEEEEecCC
Q psy17026 268 TMTRPKIELGD-----VTPHNIKQLKRLNTVVFPVSYN-----EKFYKDVLE---AGELAKLAYYNDIVIGAVCCRIDPN 334 (435)
Q Consensus 268 ~~~~~~~~ir~-----~~~~d~~~~~~l~~~~~~~~~~-----~~~~~~~~~---~~~~~~v~~~~~~ivG~~~~~~~~~ 334 (435)
.....+++++. +++++++.+..++...+...|. .+++....+ +...++++..+|++||++.+....+
T Consensus 194 ~v~~~Gi~~~~l~G~~i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~~FF~~l~~~m~~~~~l~~A~~~g~~Va~aL~l~~~~ 273 (370)
T PF04339_consen 194 KVAEQGIRIRTLTGDEITDEDWDRFYRLYQNTYAKRWGRPYLTREFFEQLAETMPEQVVLVVARRDGQPVAFALCLRGDD 273 (370)
T ss_pred HHHHcCCEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCChhhcHHHHHHHHHhCcCCEEEEEEEECCeEEEEEEEEEeCC
Confidence 01223344443 4667788888888766654443 445555444 3445667788999999998888764
Q ss_pred CCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecc
Q psy17026 335 NGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHY 405 (435)
Q Consensus 335 ~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 405 (435)
. .+--..+...++.+.- -....-..+++|.++| ++++.......+ =...||.++.+....
T Consensus 274 ~---LyGRYwG~~~~~~~LH-Fe~cYYq~Ie~aI~~G-l~~f~~GaqGEH------K~~RGf~P~~t~S~H 333 (370)
T PF04339_consen 274 T---LYGRYWGCDEEIPFLH-FELCYYQGIEYAIEHG-LRRFEPGAQGEH------KIARGFEPVPTYSAH 333 (370)
T ss_pred E---EEEeeecccccccCcc-hHHHHHHHHHHHHHcC-CCEEECCcchhH------HHHcCCccccceeee
Confidence 3 4444455566665432 2344557899999999 888766654322 236799999875444
No 158
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=96.96 E-value=0.071 Score=46.10 Aligned_cols=159 Identities=14% Similarity=0.092 Sum_probs=87.3
Q ss_pred CCcccHHHHHHHhHhcCCccccHHHHHHHHh---cCCeEEEEEE--CCeEEEEEEEEeecC-----CCCeEEEEEEEeCC
Q psy17026 109 VTPHNIKQLKRLNTVVFPVSYNEKFYKDVLE---AGELAKLAYY--NDIVIGAVCCRIDPN-----NGRKLYIMTLGCLS 178 (435)
Q Consensus 109 ~~~~d~~~l~~l~~~~~~~~~~~~~~~~~l~---~~~~~~v~~~--~g~iVG~~~~~~~~~-----~~~~~~i~~l~V~p 178 (435)
...+-++++..+.... ...+..+.+..+.. +....+++.. ..++|+.+.+..... ..+...++...++|
T Consensus 10 P~~e~~d~fmk~~g~~-r~~Fk~~Di~~wk~sf~~~Y~l~~~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p 88 (181)
T PF06852_consen 10 PPQEYFDQFMKLHGNE-RWNFKRNDIKLWKESFDDDYWLVLTCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDP 88 (181)
T ss_pred CCHHHHHHHHHHhcCC-cccccHHHHHHHHHhhccCeEEEEEEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCC
Confidence 3445566666654431 11222333333333 3233333333 355787776543221 23578999999999
Q ss_pred CccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHh-CCCEEEEEeecccccCCCCceEEEEeeccccCCC
Q psy17026 179 PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKK-FGFEIVETKQHYYKRIEPADAYVLQKTLRNKVPN 257 (435)
Q Consensus 179 ~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k-~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~~~~~ 257 (435)
+|||+|+++.+-+.+.+..+..+ ....+. .|..+.++|.+ +||...+.-..|.. .....+...|
T Consensus 89 ~yRg~~~~kl~~~~~~~~~~~~~--~N~~~~---~~~~~~~~w~k~~G~~~~~h~~~y~S----------~y~~~d~~IP 153 (181)
T PF06852_consen 89 EYRGKGIMKLQDDICMDELDSVD--DNSVAQ---GNVKMSNFWHKMFGFDDYGHDWYYVS----------YYDPDDVKIP 153 (181)
T ss_pred cccCcchHHHHHHHHHHHhccCC--Cceeee---cCHHHHHHHHHHhCCCCCccceeEee----------eccHHHeecc
Confidence 99999999755454445544433 333333 45578888886 89876654111111 1111111111
Q ss_pred CCCCCCCccccCCCCcEEEEcCCchhHHHHHHHhH
Q psy17026 258 GEEHKDGNVFTMTRPKIELGDVTPHNIKQLKRLNT 292 (435)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~ir~~~~~d~~~~~~l~~ 292 (435)
......++.++.+++.+.+++.+..+
T Consensus 154 ---------~~L~~~gi~vKna~eVp~~dii~YD~ 179 (181)
T PF06852_consen 154 ---------ENLDTDGITVKNAREVPKEDIIKYDQ 179 (181)
T ss_pred ---------CccCcCceEecccccCCHHHHHhhcc
Confidence 01234568899999988888887543
No 159
>PRK10456 arginine succinyltransferase; Provisional
Probab=96.94 E-value=0.0092 Score=56.52 Aligned_cols=126 Identities=12% Similarity=0.101 Sum_probs=79.7
Q ss_pred ceEEeeCCcccHHHHHHHhHhcCC----ccccHHHHHHHH-----------h--cCCeEEEEEE--CCeEEEEEEEEeec
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVVFP----VSYNEKFYKDVL-----------E--AGELAKLAYY--NDIVIGAVCCRIDP 163 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~~~----~~~~~~~~~~~l-----------~--~~~~~~v~~~--~g~iVG~~~~~~~~ 163 (435)
|+.|||++.+|+++|.+|....-+ -|-+.+.+...+ . +..+.+|.++ .|+|||++++...-
T Consensus 1 M~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~v 80 (344)
T PRK10456 1 MMVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAV 80 (344)
T ss_pred CeEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEecc
Confidence 478999999999999999776542 122222222211 1 1235667775 68999999876443
Q ss_pred CCC----------------------------------CeEEEEEEEeCCCccCCCHHHHHHHHHH---HHHHhcCCccEE
Q psy17026 164 NNG----------------------------------RKLYIMTLGCLSPYRRLGIGSMMLEHIL---NYVEKDGNFDSI 206 (435)
Q Consensus 164 ~~~----------------------------------~~~~i~~l~V~p~~rg~GiG~~Ll~~~~---~~a~~~g~~~~v 206 (435)
... ....++.++++|+||+.|.|+.|-+.=. ...++.- ..+|
T Consensus 81 G~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~RfLFiA~~~erF-~~~v 159 (344)
T PRK10456 81 GLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKF-NDKV 159 (344)
T ss_pred cCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHHHHHHHhhHhhh-hhhh
Confidence 310 4567999999999999999988776543 3333333 3444
Q ss_pred EEEEE--cCCHHHHHHHHhCCCEEE
Q psy17026 207 YLHVQ--LNNDVAIDFYKKFGFEIV 229 (435)
Q Consensus 207 ~l~v~--~~N~~a~~~y~k~GF~~~ 229 (435)
.+... .+..+.-.||+.+|=...
T Consensus 160 iAEmRG~~De~G~SPFWd~lg~hFF 184 (344)
T PRK10456 160 VAEMRGVIDEHGYSPFWQSLGKRFF 184 (344)
T ss_pred heeccCccCCCCCCccHHHhhcccc
Confidence 44332 122255679988885543
No 160
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=96.81 E-value=0.022 Score=49.75 Aligned_cols=118 Identities=13% Similarity=0.129 Sum_probs=82.6
Q ss_pred CchhHHHHHHHhHhhCCC--CCCHH----HHHHHHhcCce-EEEEEeCCEEEEEEEEEecCCC-----------------
Q psy17026 280 TPHNIKQLKRLNTVVFPV--SYNEK----FYKDVLEAGEL-AKLAYYNDIVIGAVCCRIDPNN----------------- 335 (435)
Q Consensus 280 ~~~d~~~~~~l~~~~~~~--~~~~~----~~~~~~~~~~~-~~v~~~~~~ivG~~~~~~~~~~----------------- 335 (435)
+.++++++..+....|.+ .|.-. ...+..+.... +.++.++|+++|++-+.+....
T Consensus 6 ~~~~l~~~~rlR~~vFv~rlgW~v~~~dg~E~DqyD~~~~~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p 85 (182)
T PF00765_consen 6 SRRLLEEMFRLRHRVFVDRLGWDVPCEDGMEIDQYDDPDAVYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAP 85 (182)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCCCHHCCTSEE--TTGCTT-EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS---
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCcCCCCcEeeecCCCCCeEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCC
Confidence 456778888888888865 46532 11222333444 4456778999999877754321
Q ss_pred --CCeEEEEEEEECCCccc------CChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 336 --GRKLYIMTLGCLSPYRR------LGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 336 --~~~~~i~~i~V~p~~rg------kGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
+...++..++|+++.++ .-+...|+..+++++.++| ++.+...+.. ...++++++||...-.
T Consensus 86 ~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~g-i~~~v~V~~~---~~~r~l~r~G~~~~~l 155 (182)
T PF00765_consen 86 RSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNG-IRHIVGVVDP---AMERILRRAGWPVRRL 155 (182)
T ss_dssp SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT--SEEEEEEEH---HHHHHHHHCT-EEEES
T ss_pred CCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCC-CCEEEEEECh---HHHHHHHHcCCceEEC
Confidence 26789999999998532 2467799999999999999 9999888877 8999999999998765
No 161
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=96.72 E-value=0.076 Score=45.89 Aligned_cols=120 Identities=18% Similarity=0.177 Sum_probs=71.0
Q ss_pred EEcCCchhHHHHHHHhHhhCCCCCCHHHHH---HHHhcCceEEEEEe--CCEEEEEEEEEe-cC----CCCCeEEEEEEE
Q psy17026 276 LGDVTPHNIKQLKRLNTVVFPVSYNEKFYK---DVLEAGELAKLAYY--NDIVIGAVCCRI-DP----NNGRKLYIMTLG 345 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~--~~~ivG~~~~~~-~~----~~~~~~~i~~i~ 345 (435)
+..-+.+-++++..+.... ...+..+.+. +...+...++++.. ..++|+.+.... .+ ......+++-.+
T Consensus 7 v~NP~~e~~d~fmk~~g~~-r~~Fk~~Di~~wk~sf~~~Y~l~~~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w 85 (181)
T PF06852_consen 7 VINPPQEYFDQFMKLHGNE-RWNFKRNDIKLWKESFDDDYWLVLTCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFW 85 (181)
T ss_pred EeCCCHHHHHHHHHHhcCC-cccccHHHHHHHHHhhccCeEEEEEEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeee
Confidence 3444556678887776441 1223344443 33334344444433 456777665433 22 123678999999
Q ss_pred ECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHh-cCcEEEeE
Q psy17026 346 CLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKK-FGFEIVET 401 (435)
Q Consensus 346 V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k-~GF~~~~~ 401 (435)
++|+|||+|+++.+-..+.+..+..+ -+ +.+ ..|..+.++|.+ +||...+.
T Consensus 86 ~~p~yRg~~~~kl~~~~~~~~~~~~~-~N-~~~---~~~~~~~~~w~k~~G~~~~~h 137 (181)
T PF06852_consen 86 IDPEYRGKGIMKLQDDICMDELDSVD-DN-SVA---QGNVKMSNFWHKMFGFDDYGH 137 (181)
T ss_pred eCCcccCcchHHHHHHHHHHHhccCC-Cc-eee---ecCHHHHHHHHHHhCCCCCcc
Confidence 99999999999644445545555543 22 323 244578888885 59988886
No 162
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=96.61 E-value=0.063 Score=44.94 Aligned_cols=102 Identities=15% Similarity=0.158 Sum_probs=69.0
Q ss_pred ceEEeeCC---cccHHHHHHHhHhcC--------CccccHHHHHHHHhcCCe----EEEEEE--CCeEEEEEEEEeec--
Q psy17026 103 KIELGDVT---PHNIKQLKRLNTVVF--------PVSYNEKFYKDVLEAGEL----AKLAYY--NDIVIGAVCCRIDP-- 163 (435)
Q Consensus 103 ~i~ir~~~---~~d~~~l~~l~~~~~--------~~~~~~~~~~~~l~~~~~----~~v~~~--~g~iVG~~~~~~~~-- 163 (435)
.+....+. +.++.++..|...-+ .-.||.+++...+..+.+ .+.+.. .+++|||++..+..
T Consensus 23 gF~W~~~dl~d~~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~~~kLvgfIsaip~~ir 102 (162)
T PF01233_consen 23 GFEWSTLDLNDDEELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKSSKKLVGFISAIPATIR 102 (162)
T ss_dssp TEEEEE--TTSHHHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEETTTTEEEEEEEEEEEEEE
T ss_pred CCEEEecCCCCHHHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEECCCCEEEEEEccceEEEE
Confidence 44555554 455666666655544 234788998888886543 444433 79999999965443
Q ss_pred ---CCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccE
Q psy17026 164 ---NNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDS 205 (435)
Q Consensus 164 ---~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~ 205 (435)
.....++|.-|+|++..|.++++--|++++-..+...| +.+
T Consensus 103 v~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~g-I~q 146 (162)
T PF01233_consen 103 VRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQG-IWQ 146 (162)
T ss_dssp ETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT---E
T ss_pred EeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcC-cee
Confidence 22267889999999999999999999999999999998 443
No 163
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=96.56 E-value=0.35 Score=48.08 Aligned_cols=244 Identities=15% Similarity=0.154 Sum_probs=127.8
Q ss_pred eEEEEEEC-CeEEEEEEEEeecCCCCeEEEEEEEeCC--CccCCCHHHHHHHHHHHHHHhcCCccEEEEEE---------
Q psy17026 143 LAKLAYYN-DIVIGAVCCRIDPNNGRKLYIMTLGCLS--PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHV--------- 210 (435)
Q Consensus 143 ~~~v~~~~-g~iVG~~~~~~~~~~~~~~~i~~l~V~p--~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v--------- 210 (435)
..+++.++ ++++|.+.+....... ...+..+-=-| +|...-+-..+++.+.+++++++ +-.+.+.-
T Consensus 36 ~~vgv~~d~~~v~aa~ll~~~~~~~-g~~~~yiprGPv~d~~d~ell~~f~~~Lk~~akk~~-a~~lridP~~~~~~~~~ 113 (406)
T PF02388_consen 36 ERVGVKDDGGEVAAAALLLRKKPFK-GFKYAYIPRGPVMDYSDEELLEFFLEELKKYAKKKR-ALFLRIDPNVIYQERDE 113 (406)
T ss_dssp EEEEEE-TTS-EEEEEEEEEEECTT-TCEEEEETT--EC-TT-HHHHHHHHHHHHHHHCTTT-EEEEEE--S-EEECE-T
T ss_pred EEEEEEeCCCeEEEEEEEEEeccCC-ceeEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC-EEEEEEeCchhhhhccc
Confidence 34455554 6666655444333221 11122222235 67788888999999999999877 55554411
Q ss_pred ------EcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeeccccCCCCCCCCCCccc-------cCCCCcEEEE
Q psy17026 211 ------QLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRNKVPNGEEHKDGNVF-------TMTRPKIELG 277 (435)
Q Consensus 211 ------~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~~~~~~~~~~~~~~~-------~~~~~~~~ir 277 (435)
...|...+..++++||...+....+-. .....+.+.++|.... .......... .-...+++++
T Consensus 114 ~g~~~~~~~~~~~~~~l~~~G~~~~g~~~~~~~--~~qpr~~~v~dL~~~~--~e~ll~~~~~~~R~~IrkA~k~GV~vr 189 (406)
T PF02388_consen 114 DGEPIEGEENDELIENLKALGFRHQGFTKGYDD--TIQPRWTYVKDLTGFS--EEELLKSFSKKTRYNIRKAEKKGVEVR 189 (406)
T ss_dssp TS-EEEE-S-THHHHHHHHTT-CCTS-SSSTTS--SSS-SEEEEEEGCC-T--CHHCHHCS-HHHHHHHHHHHCTTEEEE
T ss_pred ccccccCcchHHHHHHHHhcCceecCcccCCCc--ccCccEEEEEECCCCC--HHHHHHHhcHHHHHHHHHhhcCceEEE
Confidence 245678899999999998776554321 2345567777777411 1100000000 0134568999
Q ss_pred cCCchhHHHHHHHhHhh-----CCCCCCHHHHHHHHh---cCceEE----------------------------------
Q psy17026 278 DVTPHNIKQLKRLNTVV-----FPVSYNEKFYKDVLE---AGELAK---------------------------------- 315 (435)
Q Consensus 278 ~~~~~d~~~~~~l~~~~-----~~~~~~~~~~~~~~~---~~~~~~---------------------------------- 315 (435)
..+.++++.+.++.... |.. -+.+++...++ +...++
T Consensus 190 ~~~~e~l~~F~~l~~~T~~R~~f~~-r~~~Yf~~l~~~f~d~a~~~~A~l~~~~~~~~l~~~~~~~~~~i~~l~~~l~~~ 268 (406)
T PF02388_consen 190 EGSREELDDFYDLYKETAERKGFSI-RSLEYFENLYDAFGDKAKFFLAELNGKEYLESLQEKLEKLEKEIEKLEEKLEKN 268 (406)
T ss_dssp EE-CHHHHHHHHHHHHHHHHTT------HHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred EcCHHHHHHHHHHHHHHHhhCCCcc-cCHHHHHHHHHhcCCCeEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999986432 111 01111111111 011111
Q ss_pred ---------------------------EEEe-CCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHH
Q psy17026 316 ---------------------------LAYY-NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYV 367 (435)
Q Consensus 316 ---------------------------v~~~-~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~ 367 (435)
.... ++.+++.+.+...++ .++...-+-.++|+.-+-...|.-.+++++
T Consensus 269 ~k~~~k~~~~~~q~~~~~k~~~~~~~~~~~~~~~~~la~~l~~~~g~---~~~yly~gs~~~~~~~~~~~~l~~~~i~~a 345 (406)
T PF02388_consen 269 PKKKNKLKELEEQLASLEKRIEEAEELIAEYGDEIPLAGALFIYYGD---EAYYLYGGSDEEYRKFYAPYLLQWEAIKYA 345 (406)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SEEEEEEEEEEEETT---EEEEEEEEE-CGCGGCTHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEEEEEEEECC---EEEEEECccchhhHhcCcchHHHHHHHHHH
Confidence 1122 233566555555543 233445688899999997778888999999
Q ss_pred HHcCCccEEEE-EEEcCCHH---HHHHHH-hcCcE
Q psy17026 368 EKDGNFDSIYL-HVQLNNDV---AIDFYK-KFGFE 397 (435)
Q Consensus 368 ~~~g~~~~i~l-~v~~~N~~---a~~~y~-k~GF~ 397 (435)
+++| +...-. .+...... ...+|. |.||-
T Consensus 346 ~~~G-~~~ydf~Gi~~~~~~~~~~~Gl~~FK~~F~ 379 (406)
T PF02388_consen 346 KEKG-IKRYDFGGISGDFDGSDPDYGLYKFKKGFG 379 (406)
T ss_dssp HHTT--SEEEEEE-SSSSTTTHTTHHHHHHHHCCT
T ss_pred HHCC-CCEEEeeCCCCCCCCCcccchHHHHhhcCC
Confidence 9999 887766 44333222 336666 66664
No 164
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=96.29 E-value=0.39 Score=44.37 Aligned_cols=273 Identities=11% Similarity=0.104 Sum_probs=145.9
Q ss_pred EeeCCcccHHHHHHHhHhcCC--------ccccHHHHHHHHhcCC----eEEEEEECC--eEEEEEEEEee-----cCCC
Q psy17026 106 LGDVTPHNIKQLKRLNTVVFP--------VSYNEKFYKDVLEAGE----LAKLAYYND--IVIGAVCCRID-----PNNG 166 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~~~--------~~~~~~~~~~~l~~~~----~~~v~~~~g--~iVG~~~~~~~-----~~~~ 166 (435)
|.-.+..+++.+..|...-+- -.|+.+++...+..+. +.+++...+ ++|||++..+. +...
T Consensus 84 idv~N~~ql~dv~~lL~eNYVED~~ag~rf~Y~~EFl~Wal~~pg~kK~whigvRvk~t~klVaFIsa~p~~v~vRgK~~ 163 (451)
T COG5092 84 IDVANKKQLEDVFVLLEENYVEDIYAGHRFRYSVEFLQWALDGPGGKKRWHIGVRVKGTQKLVAFISAKPHLVSVRGKRS 163 (451)
T ss_pred EeccccchhHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHhhcCCCCceeeEEEEEEcccceeEEEEecceeEEEEccccc
Confidence 344445566666666544432 2255666666666543 344554444 89999985433 3333
Q ss_pred CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEE-EE--EEEcCCHHHHHHHH---------hCCCEEEEEeec
Q psy17026 167 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSI-YL--HVQLNNDVAIDFYK---------KFGFEIVETKQH 234 (435)
Q Consensus 167 ~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v-~l--~v~~~N~~a~~~y~---------k~GF~~~~~~~~ 234 (435)
.++.+.-++|+.+.|++.+.-.|++.+-..+...| +.+. +. .+..++.+--+.|. -+||....
T Consensus 164 ~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~-iw~avyTaG~~LpspVS~~RY~HRpLNwkkLy~~gFs~~p---- 238 (451)
T COG5092 164 SVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDG-IWRAVYTAGTELPSPVSQGRYYHRPLNWKKLYMCGFSGLP---- 238 (451)
T ss_pred ccceEEEEEEehhhhhCccchHHHHHHHHhhhhhh-hHHHhhhccceecCccccchhccCCcCHHHHhhcCCcCCC----
Confidence 67889999999999999999999999998887766 3221 11 11222322222221 13444110
Q ss_pred ccccCCCCceEEEEeeccccCCCCCCCCCCccccCCCCcEEEEcCCchhHHHHHHHhHhhCC-----CCCCHHHHHHHHh
Q psy17026 235 YYKRIEPADAYVLQKTLRNKVPNGEEHKDGNVFTMTRPKIELGDVTPHNIKQLKRLNTVVFP-----VSYNEKFYKDVLE 309 (435)
Q Consensus 235 ~~~~~~~~d~~~m~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~d~~~~~~l~~~~~~-----~~~~~~~~~~~~~ 309 (435)
.++..-.+. +....+. ....--+|++...|.+++.++..+-.. ..+..+.+.....
T Consensus 239 -----~g~tek~~~---a~~~lp~-----------~tkt~GlR~~e~kD~~~v~~L~~~y~~Rfel~~~f~~Eei~h~F~ 299 (451)
T COG5092 239 -----DGRTEKVKE---ARNALPA-----------KTKTEGLRLAEEKDMEDVARLYLEYSRRFELYEEFRFEEIVHTFR 299 (451)
T ss_pred -----CCchhhhHh---HhhcCCc-----------cCCCcccchhhhhCHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcc
Confidence 111111111 1101111 111123689999999999988643211 1122222222221
Q ss_pred ------cCce--EEEEEe-CCEEEEEEEEEecCCC---------CCeEEEEEEEECCCcccC------Ch---HHHHHHH
Q psy17026 310 ------AGEL--AKLAYY-NDIVIGAVCCRIDPNN---------GRKLYIMTLGCLSPYRRL------GI---GSMMLEH 362 (435)
Q Consensus 310 ------~~~~--~~v~~~-~~~ivG~~~~~~~~~~---------~~~~~i~~i~V~p~~rgk------Gl---g~~Ll~~ 362 (435)
+... .+|+.+ +|+|-+|..+...+.. -..+|++..+.+..+..- .+ -..|+..
T Consensus 300 ~~~~v~~~~v~~syvVe~p~gkItdFfsFyslp~t~i~n~kykdiq~gYLYYya~d~~~kd~~~~a~~a~~~r~~e~v~D 379 (451)
T COG5092 300 PVKNVVDKQVTYSYVVEEPNGKITDFFSFYSLPFTTIENKKYKDIQGGYLYYYAGDDQFKDFDPKATKALKTRVAEMVGD 379 (451)
T ss_pred cccccccCceEEEEEEeCCCCccccceEEEeccceeecCccccccceeEEEEEccCccccccChHHHHHHHHHHHHHHHH
Confidence 1222 234443 7888888777654411 166888887777644321 01 2234455
Q ss_pred HHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeeccc
Q psy17026 363 ILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYY 406 (435)
Q Consensus 363 ~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y 406 (435)
++-.++..+ +...-.-+.-+|. -|...++|-.-.-.-+||
T Consensus 380 a~ilak~~~-~DVFNalt~~dN~---lFL~dLkFg~GdGflnyY 419 (451)
T COG5092 380 AMILAKVEG-CDVFNALTMMDNS---LFLADLKFGCGDGFLNYY 419 (451)
T ss_pred HHHHHHHcC-Cchhhhhhhccch---hHHHhcCccCCCceeEEE
Confidence 555566666 5555444444443 377788998765455554
No 165
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=96.22 E-value=0.041 Score=52.11 Aligned_cols=122 Identities=13% Similarity=0.072 Sum_probs=76.5
Q ss_pred EeeCCcccHHHHHHHhHhcCC----ccccHHHHHHHH-----------h--cCCeEEEEEE--CCeEEEEEEEEeecCCC
Q psy17026 106 LGDVTPHNIKQLKRLNTVVFP----VSYNEKFYKDVL-----------E--AGELAKLAYY--NDIVIGAVCCRIDPNNG 166 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~~~----~~~~~~~~~~~l-----------~--~~~~~~v~~~--~g~iVG~~~~~~~~~~~ 166 (435)
|||+..+|+++|.+|....-+ -|-+.+.+...+ . +..+.+|.++ .|+|||++++...-...
T Consensus 2 vRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~~ 81 (336)
T TIGR03244 2 VRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGLE 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 699999999999999776542 122222222211 1 1235667776 68999999876443310
Q ss_pred ----------------------------------CeEEEEEEEeCCCccCCCHHHHHHHHHHH---HHHhcCCccEEEEE
Q psy17026 167 ----------------------------------RKLYIMTLGCLSPYRRLGIGSMMLEHILN---YVEKDGNFDSIYLH 209 (435)
Q Consensus 167 ----------------------------------~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~---~a~~~g~~~~v~l~ 209 (435)
....++.++++|+||+.|.|+.|-+.=.- ..++.- ..+|.+.
T Consensus 82 ~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~RfLFiA~~~erF-~~~viAE 160 (336)
T TIGR03244 82 EPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSRFLFIAQFRERF-SKKIIAE 160 (336)
T ss_pred CCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHHHHHHHhhHhhh-hhhhhhh
Confidence 45679999999999999999987765432 333333 3344333
Q ss_pred E---EcCCHHHHHHHHhCCCEEE
Q psy17026 210 V---QLNNDVAIDFYKKFGFEIV 229 (435)
Q Consensus 210 v---~~~N~~a~~~y~k~GF~~~ 229 (435)
. ...| +--.||+.+|=...
T Consensus 161 mrG~~De~-G~SPFWd~lg~hFF 182 (336)
T TIGR03244 161 MRGVSDEQ-GRSPFWNALGRHFF 182 (336)
T ss_pred hcCccCCC-CCCchHHHhhcccc
Confidence 2 2233 45579988885543
No 166
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=96.21 E-value=0.042 Score=51.98 Aligned_cols=123 Identities=9% Similarity=0.101 Sum_probs=77.4
Q ss_pred EeeCCcccHHHHHHHhHhcCC----cccc-----------HHHHHHHHh---cCCeEEEEEE--CCeEEEEEEEEeecCC
Q psy17026 106 LGDVTPHNIKQLKRLNTVVFP----VSYN-----------EKFYKDVLE---AGELAKLAYY--NDIVIGAVCCRIDPNN 165 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~~~----~~~~-----------~~~~~~~l~---~~~~~~v~~~--~g~iVG~~~~~~~~~~ 165 (435)
|||++.+|+++|.+|....-+ -|-+ ...|..... +..+.+|.++ .|+|||++++...-..
T Consensus 2 iRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~ 81 (336)
T TIGR03245 2 VRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAGY 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEecccC
Confidence 699999999999999766542 1112 222211111 1235667775 6899999987644331
Q ss_pred C----------------------------------CeEEEEEEEeCCCccCCCHHHHHHHHHH---HHHHhcCCccEEEE
Q psy17026 166 G----------------------------------RKLYIMTLGCLSPYRRLGIGSMMLEHIL---NYVEKDGNFDSIYL 208 (435)
Q Consensus 166 ~----------------------------------~~~~i~~l~V~p~~rg~GiG~~Ll~~~~---~~a~~~g~~~~v~l 208 (435)
. ....++.++++|+||+.|.|+.|-+.=. ..-++.- ..+|.+
T Consensus 82 ~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~RfLFiA~~~erF-~~~viA 160 (336)
T TIGR03245 82 GEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLLFMAAHRERF-QSRIIV 160 (336)
T ss_pred CCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHHHHHHhhHhhh-hhhhee
Confidence 0 4567999999999999999998776543 3333333 344544
Q ss_pred EEE--cCCHHHHHHHHhCCCEEE
Q psy17026 209 HVQ--LNNDVAIDFYKKFGFEIV 229 (435)
Q Consensus 209 ~v~--~~N~~a~~~y~k~GF~~~ 229 (435)
... .+..+--.||+.+|=...
T Consensus 161 EmrG~~De~G~SPFWd~lg~hFF 183 (336)
T TIGR03245 161 EIQGVQDDNGDSPFWDAIGRHFF 183 (336)
T ss_pred eccCccCCCCCCccHHHhhcccc
Confidence 432 122245578988885543
No 167
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=96.19 E-value=0.077 Score=47.35 Aligned_cols=120 Identities=14% Similarity=0.107 Sum_probs=82.0
Q ss_pred eeCCcccHHHHHHHhHhcCCc--cccHH-----HHHHHHhcCCeEEEEE-ECCeEEEEEEEEeecC--------------
Q psy17026 107 GDVTPHNIKQLKRLNTVVFPV--SYNEK-----FYKDVLEAGELAKLAY-YNDIVIGAVCCRIDPN-------------- 164 (435)
Q Consensus 107 r~~~~~d~~~l~~l~~~~~~~--~~~~~-----~~~~~l~~~~~~~v~~-~~g~iVG~~~~~~~~~-------------- 164 (435)
+...++++.++.+|..++|-. .|+.. +..++-.....++++. ++|++||++-+.....
T Consensus 11 ~~~~~~~l~~~~rLR~~VF~~elgW~~~~~~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~ 90 (207)
T PRK13834 11 YEREASLLKQMHRLRARVFGGRLGWDVSITDGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPA 90 (207)
T ss_pred hhcCHHHHHHHHHHHHHHhccccCCCCCCCCCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCC
Confidence 445567788888888887753 24321 1111212233455544 5789999887653321
Q ss_pred -----CCCeEEEEEEEeCCCccCC---C----HHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 165 -----NGRKLYIMTLGCLSPYRRL---G----IGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 165 -----~~~~~~i~~l~V~p~~rg~---G----iG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
.....++..++|+|++++. + +...|+..+.+++..+| +..++..+.. ...++++++||....
T Consensus 91 ~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~G-i~~~~~v~~~---~~~r~l~r~G~~~~~ 164 (207)
T PRK13834 91 GRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANG-YTEIVTATDL---RFERILARAGWPMQR 164 (207)
T ss_pred CCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCC-CCEEEEEECH---HHHHHHHHcCCCeEE
Confidence 1157889999999985322 2 56789999999999999 9988877766 778999999998643
No 168
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=96.08 E-value=0.054 Score=51.24 Aligned_cols=123 Identities=14% Similarity=0.089 Sum_probs=77.6
Q ss_pred EeeCCcccHHHHHHHhHhcCC----ccc-----------cHHHHHHHHh--cCCeEEEEEE--CCeEEEEEEEEeecCCC
Q psy17026 106 LGDVTPHNIKQLKRLNTVVFP----VSY-----------NEKFYKDVLE--AGELAKLAYY--NDIVIGAVCCRIDPNNG 166 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~~~----~~~-----------~~~~~~~~l~--~~~~~~v~~~--~g~iVG~~~~~~~~~~~ 166 (435)
||++..+|+++|.+|....-+ -|- +...|..... +..+.+|.++ .|+|||++++...-...
T Consensus 2 vRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~ 81 (335)
T TIGR03243 2 VRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGLD 81 (335)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 699999999999999766532 111 2222211111 2235667775 68999999876443310
Q ss_pred ----------------------------------CeEEEEEEEeCCCccCCCHHHHHHHHHH---HHHHhcCCccEEEEE
Q psy17026 167 ----------------------------------RKLYIMTLGCLSPYRRLGIGSMMLEHIL---NYVEKDGNFDSIYLH 209 (435)
Q Consensus 167 ----------------------------------~~~~i~~l~V~p~~rg~GiG~~Ll~~~~---~~a~~~g~~~~v~l~ 209 (435)
....++.++++|+||+.|.|+.|-+.=. ...++.- ..+|...
T Consensus 82 ~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~RfLFiA~~~erF-~~~viAE 160 (335)
T TIGR03243 82 EPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRFLFIAAFRERF-GDKIIAE 160 (335)
T ss_pred CCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHHHHHHhhHhhh-hhhheee
Confidence 4567999999999999999998876543 3333443 3445444
Q ss_pred EE--cCCHHHHHHHHhCCCEEE
Q psy17026 210 VQ--LNNDVAIDFYKKFGFEIV 229 (435)
Q Consensus 210 v~--~~N~~a~~~y~k~GF~~~ 229 (435)
.. .+..+--.||+.+|-...
T Consensus 161 mrG~~De~G~SPFWd~lg~hFF 182 (335)
T TIGR03243 161 MRGVSDEQGRSPFWEALGRHFF 182 (335)
T ss_pred ccCccCCCCCCccHHHhhcccc
Confidence 32 122245579998886543
No 169
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=96.08 E-value=0.057 Score=49.47 Aligned_cols=117 Identities=17% Similarity=0.274 Sum_probs=79.8
Q ss_pred CcccHHHHHHHhHhcCC--cccc------HHHHHHHHhcCCeEEEEEE--CCeEEEEEEEEeec---C------------
Q psy17026 110 TPHNIKQLKRLNTVVFP--VSYN------EKFYKDVLEAGELAKLAYY--NDIVIGAVCCRIDP---N------------ 164 (435)
Q Consensus 110 ~~~d~~~l~~l~~~~~~--~~~~------~~~~~~~l~~~~~~~v~~~--~g~iVG~~~~~~~~---~------------ 164 (435)
++.++.++..|..++|- ..|+ ...-.+..+.....+++.+ +|++||++-+.... .
T Consensus 15 ~~~~~~~~~~lR~~VFv~e~gw~~~~~~~~~~E~D~~D~~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~e~~~~~ 94 (241)
T TIGR03694 15 TPELLEEAFRLRYQVYCEELGFEPPSDYPDGLETDEYDAHSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPFEKHCSH 94 (241)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCCCCcEEEEEECCCCCEEEEEEEeccccccccccccHHHHhcc
Confidence 34557788888777763 2243 1111111223334555543 58999999886531 0
Q ss_pred -------------CCCeEEEEEEEeCCCccCC--------C--------------------HHHHHHHHHHHHHHhcCCc
Q psy17026 165 -------------NGRKLYIMTLGCLSPYRRL--------G--------------------IGSMMLEHILNYVEKDGNF 203 (435)
Q Consensus 165 -------------~~~~~~i~~l~V~p~~rg~--------G--------------------iG~~Ll~~~~~~a~~~g~~ 203 (435)
....+++..++|+|++|++ | +...|+..+.+++...| +
T Consensus 95 ~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~G-i 173 (241)
T TIGR03694 95 SLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANG-I 173 (241)
T ss_pred ccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHHCC-C
Confidence 0146788999999999974 2 45779999999999999 8
Q ss_pred cEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 204 DSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 204 ~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
+.++..+.. ...++++++|+....
T Consensus 174 ~~~~~v~~~---~l~r~l~r~G~~~~~ 197 (241)
T TIGR03694 174 THWYAIMEP---RLARLLSRFGIQFRQ 197 (241)
T ss_pred cEEEEEeCH---HHHHHHHHhCCceEE
Confidence 888877766 788999999987643
No 170
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=96.00 E-value=0.073 Score=48.75 Aligned_cols=122 Identities=16% Similarity=0.241 Sum_probs=82.6
Q ss_pred EEEcCC-chhHHHHHHHhHhhCCC--CCCH------HHHHHHHhcCceEEEEEe--CCEEEEEEEEEecC----------
Q psy17026 275 ELGDVT-PHNIKQLKRLNTVVFPV--SYNE------KFYKDVLEAGELAKLAYY--NDIVIGAVCCRIDP---------- 333 (435)
Q Consensus 275 ~ir~~~-~~d~~~~~~l~~~~~~~--~~~~------~~~~~~~~~~~~~~v~~~--~~~ivG~~~~~~~~---------- 333 (435)
.+..+. ..++.++..+...+|-. .|.. ....+..+.....+++.+ +|++||++-+....
T Consensus 9 ~v~~a~~~~~~~~~~~lR~~VFv~e~gw~~~~~~~~~~E~D~~D~~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~ 88 (241)
T TIGR03694 9 EIIPAVTPELLEEAFRLRYQVYCEELGFEPPSDYPDGLETDEYDAHSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPF 88 (241)
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCCCCcEEEEEECCCCCEEEEEEEeccccccccccccH
Confidence 344443 34578888888777743 3431 111122223344455543 58999998776521
Q ss_pred ------------------CCCCeEEEEEEEECCCcccC--------C--------------------hHHHHHHHHHHHH
Q psy17026 334 ------------------NNGRKLYIMTLGCLSPYRRL--------G--------------------IGSMMLEHILNYV 367 (435)
Q Consensus 334 ------------------~~~~~~~i~~i~V~p~~rgk--------G--------------------lg~~Ll~~~~~~~ 367 (435)
......++..++|++++|++ | +...|+..+.+++
T Consensus 89 e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a 168 (241)
T TIGR03694 89 EKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALS 168 (241)
T ss_pred HHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHH
Confidence 01257899999999999974 2 5577999999999
Q ss_pred HHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEe
Q psy17026 368 EKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 400 (435)
Q Consensus 368 ~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~ 400 (435)
.+.| ++.+...+.. ...+++.++|+....
T Consensus 169 ~~~G-i~~~~~v~~~---~l~r~l~r~G~~~~~ 197 (241)
T TIGR03694 169 SANG-ITHWYAIMEP---RLARLLSRFGIQFRQ 197 (241)
T ss_pred HHCC-CcEEEEEeCH---HHHHHHHHhCCceEE
Confidence 9999 9888877776 688899999986643
No 171
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=95.95 E-value=0.15 Score=48.45 Aligned_cols=212 Identities=11% Similarity=0.083 Sum_probs=106.6
Q ss_pred eEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHH
Q psy17026 143 LAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYK 222 (435)
Q Consensus 143 ~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~ 222 (435)
.+++...++-+|++.... .. ...+.+-.-.|+ --..++..+.+++.+.| ...++..+.+ .....|+
T Consensus 24 ~~~~~~~~~~~i~y~~~~---~~--~~~~~~Pig~~~-----~~~~~i~~f~~~~~~~~-~~~~~~~v~e---~~~~~~~ 89 (299)
T PF09924_consen 24 YFFYSPEGDGLIAYRVRG---GG--AVVLGDPIGAPE-----DRPELIEEFLEFADRNG-WKPIFYGVSE---EFLELLE 89 (299)
T ss_dssp --EEEEETTEEE-EEEEE---TT--EEEEE--EE-SS------HHHHHHHHHHHHHHCT-S--EEEEE-H---HHHHHHH
T ss_pred eEEEEccCCEEEEEEEEC---Ce--EEEEEcCccCcH-----HHHHHHHHHHHHHHHCC-CceEEEECCH---HHHHHHH
Confidence 344456777777763221 11 122333222343 34689999999999998 7888888877 6789999
Q ss_pred hCCCEEEEEeecccccCCCCceEEEEeeccccCCCCCCCC-CCccccCCC-CcEEEEcC---CchhHHHHHHHhHhhCCC
Q psy17026 223 KFGFEIVETKQHYYKRIEPADAYVLQKTLRNKVPNGEEHK-DGNVFTMTR-PKIELGDV---TPHNIKQLKRLNTVVFPV 297 (435)
Q Consensus 223 k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~~~~~~~~~~-~~~~~~~~~-~~~~ir~~---~~~d~~~~~~l~~~~~~~ 297 (435)
.+||..... +.+.+.-...+.- ........ ..+...... -.+++.+. ++++.+++.++...+...
T Consensus 90 ~~g~~~~~~---------g~eyv~~~~~~~l-~Gkk~~~~Rn~in~~~k~G~~~~~~~~~~~~~~~~~el~~i~~~W~~~ 159 (299)
T PF09924_consen 90 ELGFESNRD---------GEEYVYDLEDFTL-SGKKFRKKRNHINRFEKEGYTFEVVPIPELDPELRDELLEISDEWLKE 159 (299)
T ss_dssp HHSEEE-GG---------G-EEEEEHHHHH---SGGGHHHHHHHHHHHHH--T-EEEE-----GGGHHHHHHHHHHHHHH
T ss_pred HcCCeeecC---------CcEEEEEcccccc-CCchhhhHHHHHHHHhcCceEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 999664432 2222222111110 00000000 000000011 12556666 788888888886655433
Q ss_pred C--CCHHHHHHHHh----cCceEEEEEe-CCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHc
Q psy17026 298 S--YNEKFYKDVLE----AGELAKLAYY-NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKD 370 (435)
Q Consensus 298 ~--~~~~~~~~~~~----~~~~~~v~~~-~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~ 370 (435)
. .........+. .+...+++.. +|+++||+........ . ++...+.-...---+|+-..|+..+++.+++.
T Consensus 160 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~dgki~af~~~~~~~~~-~-~~~~~~~k~~~~a~~G~~e~l~~~~~~~~~~~ 237 (299)
T PF09924_consen 160 KERPERGFIMGALEHFDELGLRGFVARVADGKIVAFAIGSPLGGR-D-GWSIDFEKADPDAPKGIYEFLNVEFAEHLKAE 237 (299)
T ss_dssp CTHHHHHHHHHHHHTHHHHT-EEEEEEE-TTEEEEEEEEEEEE-T-T-EEEEEEEEE-TT-STTHHHHHHHHHHHHS--T
T ss_pred CchhHHHHHhccccchhhcCceEEEEEECCCcEEEEEEEEEccCC-c-cEEEEEEecCCCCCCcHHHHHHHHHHHhhhhC
Confidence 2 11122222222 3567788888 9999999998877731 2 33334433322235899999999999999988
Q ss_pred CCccEEEEEEE
Q psy17026 371 GNFDSIYLHVQ 381 (435)
Q Consensus 371 g~~~~i~l~v~ 381 (435)
| +..+.|...
T Consensus 238 g-~~~lnLg~a 247 (299)
T PF09924_consen 238 G-VEYLNLGFA 247 (299)
T ss_dssp T---EEE----
T ss_pred C-ceEEEcccc
Confidence 8 888885544
No 172
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=95.87 E-value=0.14 Score=42.96 Aligned_cols=105 Identities=14% Similarity=0.129 Sum_probs=69.2
Q ss_pred CCcEEEEcCCc---hhHHHHHHHhHhhCCC--------CCCHHHHHHHHhcCce----EEEEE--eCCEEEEEEEEEecC
Q psy17026 271 RPKIELGDVTP---HNIKQLKRLNTVVFPV--------SYNEKFYKDVLEAGEL----AKLAY--YNDIVIGAVCCRIDP 333 (435)
Q Consensus 271 ~~~~~ir~~~~---~d~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~----~~v~~--~~~~ivG~~~~~~~~ 333 (435)
..++....++. +++.+++++....+-+ .|+.+++.-.+..+.. ...+. .++++|||+...+..
T Consensus 21 P~gF~W~~~dl~d~~~l~ely~lL~~nYVEDdd~~fRf~YS~efL~WaL~pPg~~~~whiGVR~~~~~kLvgfIsaip~~ 100 (162)
T PF01233_consen 21 PDGFEWSTLDLNDDEELKELYELLNENYVEDDDNMFRFDYSKEFLKWALKPPGWKKEWHIGVRVKSSKKLVGFISAIPAT 100 (162)
T ss_dssp STTEEEEE--TTSHHHHHHHHHHHHHHSSBTTTSSEEE---HHHHHHHHTSTT--GGGEEEEEETTTTEEEEEEEEEEEE
T ss_pred CCCCEEEecCCCCHHHHHHHHHHHHhcCccCCcceEEeeCCHHHHhheeeCcCCccceEEEEEECCCCEEEEEEccceEE
Confidence 44566666654 4566677776665532 4778888877774432 33332 379999999765432
Q ss_pred -----CCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEE
Q psy17026 334 -----NNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSI 376 (435)
Q Consensus 334 -----~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i 376 (435)
..-...+|--++|++++|.++++--|+.++-+++-..| +-..
T Consensus 101 irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~g-I~qA 147 (162)
T PF01233_consen 101 IRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQG-IWQA 147 (162)
T ss_dssp EEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT---EE
T ss_pred EEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcC-ceee
Confidence 22267889999999999999999999999999999988 4443
No 173
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=95.86 E-value=0.5 Score=38.48 Aligned_cols=121 Identities=12% Similarity=0.042 Sum_probs=71.8
Q ss_pred eEEeeCCcccHHHHHHHhHhcC----------Ccc-------ccHHHHHHHHhcCCeEEEEE-ECCeEEEEEEEEeecCC
Q psy17026 104 IELGDVTPHNIKQLKRLNTVVF----------PVS-------YNEKFYKDVLEAGELAKLAY-YNDIVIGAVCCRIDPNN 165 (435)
Q Consensus 104 i~ir~~~~~d~~~l~~l~~~~~----------~~~-------~~~~~~~~~l~~~~~~~v~~-~~g~iVG~~~~~~~~~~ 165 (435)
|..|++++.|.+.+..+..... |.. .+..- -.+.....+.|++. .+|++.||+....-...
T Consensus 1 M~yR~f~e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~A-lrfy~RsgHSFvA~~e~~~~~GfvLAQaVWQG 79 (161)
T PF09390_consen 1 MRYRPFTEPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAA-LRFYERSGHSFVAEDEGGELQGFVLAQAVWQG 79 (161)
T ss_dssp -EEE---GGGHHHHHHC--------------------STTS---HHH-HHHHHCCS--EEEE-ETTEEEEEEEEEEEE-S
T ss_pred CcccccCcccHHHHHHHhhhccccccccccccccccccccccCCHHH-hhhhhccCCcEEEEccCCceeeeeehhHHhcC
Confidence 4579999999999999843331 111 11222 23344577889998 89999999997754433
Q ss_pred C-CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 166 G-RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 166 ~-~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
. ..+.+..+.+.| -+......-||.++.+-|-..| +..+.+.+.. ....-.+..||...+
T Consensus 80 drptVlV~ri~~~~-~~~~~~~~GLLrAvvKSAYDa~-VYEv~l~l~p---~l~~A~~a~~~~~~~ 140 (161)
T PF09390_consen 80 DRPTVLVRRILLAP-GEPEEVYEGLLRAVVKSAYDAG-VYEVHLHLDP---ELEAAARAEGFRLGG 140 (161)
T ss_dssp SSEEEEEEEE---E-ESSHHHHHHHHHHHHHHHHHTT--SEEEE---T---HHHHHHHHTT----S
T ss_pred CCceEEEEEeecCC-CCcHHHHHHHHHHHHHhhhccc-eEEEEeeCCH---HHHHHHhhcccccCC
Confidence 3 567777776655 3446788899999999999999 9999999888 667778889999766
No 174
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.82 E-value=0.038 Score=54.12 Aligned_cols=129 Identities=16% Similarity=0.223 Sum_probs=93.7
Q ss_pred cCCCceEEeeCCcccHHHHHHHhHhcCC-----ccccHHHHHHHHhcCCeEEEEE-E-----CCeEEEEEEEEeecCCCC
Q psy17026 99 YDRPKIELGDVTPHNIKQLKRLNTVVFP-----VSYNEKFYKDVLEAGELAKLAY-Y-----NDIVIGAVCCRIDPNNGR 167 (435)
Q Consensus 99 ~~~~~i~ir~~~~~d~~~l~~l~~~~~~-----~~~~~~~~~~~l~~~~~~~v~~-~-----~g~iVG~~~~~~~~~~~~ 167 (435)
...+.++++...+.+++.+.+|....-+ ..|.++..+++..++....+.+ . +.-+||++.+.....
T Consensus 409 ~Lem~l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~kk~~--- 485 (574)
T COG3882 409 NLEMRLTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEKKES--- 485 (574)
T ss_pred hheEEEEEeeccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEecCC---
Confidence 3456788999999999999999776532 4577777777665554333322 1 566889887766653
Q ss_pred eEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEE--cCCHHHHHHHHhCCCEEEEE
Q psy17026 168 KLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQ--LNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 168 ~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~--~~N~~a~~~y~k~GF~~~~~ 231 (435)
...|..+...=..-|+++-++|+..+++.|...| +..+...-. .-|.....||+++||+..+.
T Consensus 486 ~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~g-i~tir~~Y~pt~kN~pv~~FyE~mgf~l~~e 550 (574)
T COG3882 486 EWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEG-INTIRGYYIPTEKNAPVSDFYERMGFKLKGE 550 (574)
T ss_pred eEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cceeeeEecccccCCcHHHHHHHhccccccc
Confidence 2344444333334588999999999999999999 888887664 56888899999999996663
No 175
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=95.53 E-value=0.26 Score=43.96 Aligned_cols=119 Identities=15% Similarity=0.148 Sum_probs=80.5
Q ss_pred cCCchhHHHHHHHhHhhCCC--CCCHH----HHHHHHhcCceEE-EEE-eCCEEEEEEEEEecCC---------------
Q psy17026 278 DVTPHNIKQLKRLNTVVFPV--SYNEK----FYKDVLEAGELAK-LAY-YNDIVIGAVCCRIDPN--------------- 334 (435)
Q Consensus 278 ~~~~~d~~~~~~l~~~~~~~--~~~~~----~~~~~~~~~~~~~-v~~-~~~~ivG~~~~~~~~~--------------- 334 (435)
....++++++..+..+.|.+ .|... ...+..+.....+ +.. .+|+++|++-+.....
T Consensus 12 ~~~~~~l~~~~rLR~~VF~~elgW~~~~~~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~ 91 (207)
T PRK13834 12 EREASLLKQMHRLRARVFGGRLGWDVSITDGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPAG 91 (207)
T ss_pred hcCHHHHHHHHHHHHHHhccccCCCCCCCCCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCCC
Confidence 34456788888888888864 35421 1112223333333 334 4689999876543211
Q ss_pred ----CCCeEEEEEEEECCCcccC---C----hHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEe
Q psy17026 335 ----NGRKLYIMTLGCLSPYRRL---G----IGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 400 (435)
Q Consensus 335 ----~~~~~~i~~i~V~p~~rgk---G----lg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~ 400 (435)
.+...++..++|+++++.. + +...|+..+.+++..+| ++.+...+.. ...+++.++||....
T Consensus 92 ~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~G-i~~~~~v~~~---~~~r~l~r~G~~~~~ 164 (207)
T PRK13834 92 RLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANG-YTEIVTATDL---RFERILARAGWPMQR 164 (207)
T ss_pred CCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCC-CCEEEEEECH---HHHHHHHHcCCCeEE
Confidence 1268999999999986322 2 55789999999999999 9988777766 688899999987754
No 176
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.50 E-value=0.054 Score=53.12 Aligned_cols=125 Identities=16% Similarity=0.239 Sum_probs=90.1
Q ss_pred cEEEEcCCchhHHHHHHHhHhhCCC-----CCCHHHHHHHHhcCce-EEEEEe-----CCEEEEEEEEEecCCCCCeEEE
Q psy17026 273 KIELGDVTPHNIKQLKRLNTVVFPV-----SYNEKFYKDVLEAGEL-AKLAYY-----NDIVIGAVCCRIDPNNGRKLYI 341 (435)
Q Consensus 273 ~~~ir~~~~~d~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~-~~v~~~-----~~~ivG~~~~~~~~~~~~~~~i 341 (435)
.+++++....+.+.+.+|-+..... .+..+...+...++.. .|-+.. ++-+||++.+.... +...|
T Consensus 413 ~l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~kk~---~~w~I 489 (574)
T COG3882 413 RLTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEKKE---SEWFI 489 (574)
T ss_pred EEEEeeccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEecC---CeEEh
Confidence 3567788888888888887655332 3444555554443333 222221 45689988777665 34567
Q ss_pred EEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEE--EcCCHHHHHHHHhcCcEEEeE
Q psy17026 342 MTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHV--QLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 342 ~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v--~~~N~~a~~~y~k~GF~~~~~ 401 (435)
..+...-..-|+++-++|++.+.+.+...| +..+.... ...|.+...||+++||+..++
T Consensus 490 Dt~lmSCRVlgRkvE~~l~~~~~e~A~~~g-i~tir~~Y~pt~kN~pv~~FyE~mgf~l~~e 550 (574)
T COG3882 490 DTFLMSCRVLGRKVEQRLMNSLEEQALSEG-INTIRGYYIPTEKNAPVSDFYERMGFKLKGE 550 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cceeeeEecccccCCcHHHHHHHhccccccc
Confidence 777777788899999999999999999999 88888755 466889999999999997664
No 177
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=95.50 E-value=0.018 Score=41.19 Aligned_cols=31 Identities=19% Similarity=0.124 Sum_probs=27.1
Q ss_pred eEEEEEEEECCCcccCChHHHHHHHHHHHHH
Q psy17026 338 KLYIMTLGCLSPYRRLGIGSMMLEHILNYVE 368 (435)
Q Consensus 338 ~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~ 368 (435)
.+.|..|.|+|.+|++|||++||+.+.+...
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~i 35 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENFI 35 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhcc
Confidence 3568899999999999999999999987653
No 178
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=95.42 E-value=0.093 Score=41.56 Aligned_cols=69 Identities=20% Similarity=0.310 Sum_probs=49.1
Q ss_pred CeEEEEEEEEee-----cCCC------CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHH
Q psy17026 151 DIVIGAVCCRID-----PNNG------RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAID 219 (435)
Q Consensus 151 g~iVG~~~~~~~-----~~~~------~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~ 219 (435)
|.++|+.-+... +... +...+.+++|+++.|++|+|++|.+++++.- + +....+.+...++...+
T Consensus 18 g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~e---~-~~p~~~a~DrPS~Kll~ 93 (120)
T PF05301_consen 18 GAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQEE---N-VSPHQLAIDRPSPKLLS 93 (120)
T ss_pred ceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHHHc---C-CCcccceecCCcHHHHH
Confidence 568888765422 1111 2236789999999999999999999998653 3 45556667776777788
Q ss_pred HHHh
Q psy17026 220 FYKK 223 (435)
Q Consensus 220 ~y~k 223 (435)
|.+|
T Consensus 94 Fl~K 97 (120)
T PF05301_consen 94 FLKK 97 (120)
T ss_pred HHHH
Confidence 8776
No 179
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.26 E-value=0.28 Score=42.97 Aligned_cols=121 Identities=12% Similarity=0.131 Sum_probs=86.0
Q ss_pred eeCCcccHHHHHHHhHhcCCc--ccc-----HHHHHHHHhcCCeEEEE-EECCeEEEEEEEEeecCCC------------
Q psy17026 107 GDVTPHNIKQLKRLNTVVFPV--SYN-----EKFYKDVLEAGELAKLA-YYNDIVIGAVCCRIDPNNG------------ 166 (435)
Q Consensus 107 r~~~~~d~~~l~~l~~~~~~~--~~~-----~~~~~~~l~~~~~~~v~-~~~g~iVG~~~~~~~~~~~------------ 166 (435)
+...+.-++++..|..+.|-. .|. ..++.++-+.+..++++ ..+|+|+|++-+-+.....
T Consensus 10 ~~~~~~~l~em~rlR~~vF~erL~W~v~~~~g~E~DqyD~~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~ 89 (209)
T COG3916 10 RELFPKALEEMHRLRYQVFKERLGWDVVCIDGFEIDQYDNLDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEG 89 (209)
T ss_pred chhcHHHHHHHHHHHHHHHHHhcCCceeccCCccccccCCCCceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcC
Confidence 555677788888888887743 242 22333444455566666 7799999999876443321
Q ss_pred -------CeEEEEEEEeCC--CccCC---C-HHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 167 -------RKLYIMTLGCLS--PYRRL---G-IGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 167 -------~~~~i~~l~V~p--~~rg~---G-iG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
...+...++|++ .-++. . ++..|+..+++++...| ++.|...+.. ...+.++++||.....
T Consensus 90 ~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G-~~~IvtVt~~---~meril~r~Gw~~~ri 163 (209)
T COG3916 90 GPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARG-ITGIVTVTDT---GMERILRRAGWPLTRI 163 (209)
T ss_pred CCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcC-CceEEEEEch---HHHHHHHHcCCCeEEc
Confidence 456677888876 33332 3 36789999999999999 9999888776 8999999999997653
No 180
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=95.23 E-value=0.4 Score=38.44 Aligned_cols=101 Identities=12% Similarity=0.101 Sum_probs=72.3
Q ss_pred CceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHH
Q psy17026 311 GELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDF 390 (435)
Q Consensus 311 ~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~ 390 (435)
+..++-+.+.+.++|++.+...... ..-..-.-+|++|| ++...-....+|+.++-.+..+...+...-.-.+-.
T Consensus 37 ~~~Y~gVyeg~~l~Gi~~v~~i~~~---~vecHa~y~P~fRG--~a~~~~~~F~kwlL~Ns~f~~vit~vp~kt~~Grvi 111 (151)
T PF11039_consen 37 DQLYLGVYEGGQLGGIVYVEEIQPS---VVECHAMYDPGFRG--YALEIGRLFCKWLLENSPFQNVITFVPDKTRYGRVI 111 (151)
T ss_pred ccEEEEEEeceEEEEEEEEEEEeee---eEEEEeeeccccch--hHHHHHHHHHHHHhcCCceeEEEEecccccccchhH
Confidence 3445566778889998887766543 22233446899998 888888899999988765776666666655566667
Q ss_pred HHhcCcEEEeEeecccccccccceee
Q psy17026 391 YKKFGFEIVETKQHYYKRIEPADAYV 416 (435)
Q Consensus 391 y~k~GF~~~~~~~~~y~~~~~~~~~~ 416 (435)
.+=+|-+.+|...+||+...+...|.
T Consensus 112 c~llg~~RVG~id~~~~g~~~vTlYq 137 (151)
T PF11039_consen 112 CRLLGARRVGHIDDYFKGVDGVTLYQ 137 (151)
T ss_pred hhhhCCceeeeHHHHhcCCCceEEEE
Confidence 77889999999999998433333333
No 181
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=95.18 E-value=0.28 Score=38.88 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=52.3
Q ss_pred ceEEEEEe-----CCEEEEEEEEEe-----cCCCC------CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccE
Q psy17026 312 ELAKLAYY-----NDIVIGAVCCRI-----DPNNG------RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDS 375 (435)
Q Consensus 312 ~~~~v~~~-----~~~ivG~~~~~~-----~~~~~------~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~ 375 (435)
...++..+ .+.++|+.-+.. .+... ....+.+++|++..|++|+|++|++++++.- + ++.
T Consensus 4 ~~~Yll~d~~~~~~g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~e---~-~~p 79 (120)
T PF05301_consen 4 QVLYLLKDSEAGGKGAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQEE---N-VSP 79 (120)
T ss_pred eEEEEEEecCCCCCceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHHHc---C-CCc
Confidence 44555555 356888875532 22222 2236788999999999999999999988744 3 444
Q ss_pred EEEEEEcCCHHHHHHHHhc
Q psy17026 376 IYLHVQLNNDVAIDFYKKF 394 (435)
Q Consensus 376 i~l~v~~~N~~a~~~y~k~ 394 (435)
..+-++.......+|.+|+
T Consensus 80 ~~~a~DrPS~Kll~Fl~Kh 98 (120)
T PF05301_consen 80 HQLAIDRPSPKLLSFLKKH 98 (120)
T ss_pred ccceecCCcHHHHHHHHHh
Confidence 4555655555777877764
No 182
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=95.18 E-value=0.051 Score=49.42 Aligned_cols=89 Identities=17% Similarity=0.166 Sum_probs=58.5
Q ss_pred ceEEeeCCcccHHHHHHHhHhcC------Ccc---------ccHHHHHHHHhcC--CeEEEEEE--CCeEEEEEEEEeec
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVVF------PVS---------YNEKFYKDVLEAG--ELAKLAYY--NDIVIGAVCCRIDP 163 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~~------~~~---------~~~~~~~~~l~~~--~~~~v~~~--~g~iVG~~~~~~~~ 163 (435)
|+.+||++..|++++.+|....- |.. +++..+.....++ .+.+|.++ .|++||+.++...-
T Consensus 1 mlvvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~v 80 (336)
T COG3138 1 MLVVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAAV 80 (336)
T ss_pred CcccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEee
Confidence 35679999999999999976642 211 1222222222222 35667777 79999998875432
Q ss_pred CCC----------------------------------CeEEEEEEEeCCCccCCCHHHHHHH
Q psy17026 164 NNG----------------------------------RKLYIMTLGCLSPYRRLGIGSMMLE 191 (435)
Q Consensus 164 ~~~----------------------------------~~~~i~~l~V~p~~rg~GiG~~Ll~ 191 (435)
.-. ....++.++++|++|.-|.|+.|-+
T Consensus 81 Gl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Llsr 142 (336)
T COG3138 81 GLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLSK 142 (336)
T ss_pred ccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhhh
Confidence 210 3456889999999998888876544
No 183
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=95.17 E-value=0.27 Score=47.39 Aligned_cols=124 Identities=10% Similarity=0.141 Sum_probs=87.2
Q ss_pred ceEEeeCCcccHHHHHHHhHhcC----CccccHHHHHHHHh---cCCeEEEEE-ECCeEEEEEEEEeecCCCCeEEEEEE
Q psy17026 103 KIELGDVTPHNIKQLKRLNTVVF----PVSYNEKFYKDVLE---AGELAKLAY-YNDIVIGAVCCRIDPNNGRKLYIMTL 174 (435)
Q Consensus 103 ~i~ir~~~~~d~~~l~~l~~~~~----~~~~~~~~~~~~l~---~~~~~~v~~-~~g~iVG~~~~~~~~~~~~~~~i~~l 174 (435)
.++++. .+|++.+.++..... ...++.+++...++ +....+++. .+|++||.+.+..... ..+....
T Consensus 151 Gv~v~~--~~~l~~F~~l~~~t~~r~g~p~~~~~~f~~l~~~~~~~~~l~~a~~~~g~~va~~l~~~~~~---~~~~~~~ 225 (330)
T TIGR03019 151 GLTVTV--DGDLDRFYDVYAENMRDLGTPVFSRRYFRLLKDVFGEDCEVLTVRLGDGVVASAVLSFYFRD---EVLPYYA 225 (330)
T ss_pred CeEEEE--CCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhcccCEEEEEEEeCCCCEEEEEEEEEeCC---EEEEEec
Confidence 456654 356888777755433 12467778877654 222345666 6899998776655543 2333345
Q ss_pred EeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEe
Q psy17026 175 GCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETK 232 (435)
Q Consensus 175 ~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~ 232 (435)
+..++++..+-+..|+-+++++|.++| +....+.....|.+..+|-++.||+.....
T Consensus 226 g~~~~~~~~~~~~lL~w~~i~~a~~~G-~~~fDfG~s~~~~G~~~FK~~~G~~~~~l~ 282 (330)
T TIGR03019 226 GGLREARDVAANDLMYWELMRRACERG-LRVFDFGRSKRGTGPFKFKKNWGFEPQPLH 282 (330)
T ss_pred cChHHHHhhChHHHHHHHHHHHHHHCC-CcEEEcCCCCCCCccHHHHhcCCCeeccce
Confidence 667899999999999999999999999 999988776556677788888999976543
No 184
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=95.10 E-value=0.4 Score=45.78 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=67.8
Q ss_pred cEEEEcCCchhHHHHHHHhHhhCC--CCC--CHHHHHHHHh---------------cCceEEEEEe--CCEEEEEEEEEe
Q psy17026 273 KIELGDVTPHNIKQLKRLNTVVFP--VSY--NEKFYKDVLE---------------AGELAKLAYY--NDIVIGAVCCRI 331 (435)
Q Consensus 273 ~~~ir~~~~~d~~~~~~l~~~~~~--~~~--~~~~~~~~~~---------------~~~~~~v~~~--~~~ivG~~~~~~ 331 (435)
++.||+++..|++++.+|....-+ ... ..+.+.+.++ +..++||+++ +|+++|.+.+..
T Consensus 1 M~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a 80 (342)
T PF04958_consen 1 MLVIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEA 80 (342)
T ss_dssp -EEEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEES
T ss_pred CeEEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEe
Confidence 367999999999999999876532 221 2222211110 2235667775 699999887753
Q ss_pred cC----------------------------------CCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcC--CccE
Q psy17026 332 DP----------------------------------NNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG--NFDS 375 (435)
Q Consensus 332 ~~----------------------------------~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g--~~~~ 375 (435)
.- +-.+.-+++.+.++|+||+-|.|+.|-..-.-++.+.. -..+
T Consensus 81 ~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~rF~~~ 160 (342)
T PF04958_consen 81 AVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRERFADR 160 (342)
T ss_dssp STTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGGS-SE
T ss_pred ccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhhcchh
Confidence 11 11166789999999999999999988776655554432 1334
Q ss_pred EEEEEE---cCCHHHHHHHHhcCcEE
Q psy17026 376 IYLHVQ---LNNDVAIDFYKKFGFEI 398 (435)
Q Consensus 376 i~l~v~---~~N~~a~~~y~k~GF~~ 398 (435)
+..... ..| .-=.||+.+|=..
T Consensus 161 viAElrG~~De~-G~SPFWdalG~~F 185 (342)
T PF04958_consen 161 VIAELRGVSDED-GRSPFWDALGRHF 185 (342)
T ss_dssp EEEE--B---TT----HHHHHTGGGT
T ss_pred eeeeccCCcCCC-CCCchHHHhhccc
Confidence 443221 111 3445777666433
No 185
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=95.07 E-value=0.032 Score=39.89 Aligned_cols=29 Identities=21% Similarity=0.182 Sum_probs=25.9
Q ss_pred EEEEEEEeCCCccCCCHHHHHHHHHHHHH
Q psy17026 169 LYIMTLGCLSPYRRLGIGSMMLEHILNYV 197 (435)
Q Consensus 169 ~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a 197 (435)
+.|..+.|+|.+|++||+++||+.+....
T Consensus 6 ~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 6 CGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 55889999999999999999999988653
No 186
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=95.04 E-value=1.1 Score=35.94 Aligned_cols=93 Identities=12% Similarity=0.078 Sum_probs=72.3
Q ss_pred cCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHH
Q psy17026 140 AGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAID 219 (435)
Q Consensus 140 ~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~ 219 (435)
.+..++.+.+++.++|++.+...... .. -+.-.-+|++|| +....-....+++-+.-.+..+...|...-.-.+-
T Consensus 36 ~~~~Y~gVyeg~~l~Gi~~v~~i~~~--~v-ecHa~y~P~fRG--~a~~~~~~F~kwlL~Ns~f~~vit~vp~kt~~Grv 110 (151)
T PF11039_consen 36 PDQLYLGVYEGGQLGGIVYVEEIQPS--VV-ECHAMYDPGFRG--YALEIGRLFCKWLLENSPFQNVITFVPDKTRYGRV 110 (151)
T ss_pred CccEEEEEEeceEEEEEEEEEEEeee--eE-EEEeeeccccch--hHHHHHHHHHHHHhcCCceeEEEEecccccccchh
Confidence 45567788899999999998877653 23 333446899998 88877778888888776677777777777667777
Q ss_pred HHHhCCCEEEEEeecccc
Q psy17026 220 FYKKFGFEIVETKQHYYK 237 (435)
Q Consensus 220 ~y~k~GF~~~~~~~~~~~ 237 (435)
.-+-+|.+.+|.+.+++.
T Consensus 111 ic~llg~~RVG~id~~~~ 128 (151)
T PF11039_consen 111 ICRLLGARRVGHIDDYFK 128 (151)
T ss_pred HhhhhCCceeeeHHHHhc
Confidence 778899999999998886
No 187
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=95.00 E-value=0.18 Score=39.05 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=50.3
Q ss_pred EEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCH
Q psy17026 144 AKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNND 215 (435)
Q Consensus 144 ~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~ 215 (435)
.+-++.++...|++.+..........++..++|.|..||.|+|..|.+++.+. ...+...+.++|+
T Consensus 10 ~~~~y~~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d------~~~L~Wrsr~~n~ 75 (99)
T cd04264 10 LHAIYLSEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRD------FPKLFWRSRKTNP 75 (99)
T ss_pred ceEEEEeCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhh------CCceEEEeCCCCc
Confidence 34455566677777776654333568999999999999999999999988865 3567778888774
No 188
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=94.98 E-value=0.034 Score=54.16 Aligned_cols=78 Identities=23% Similarity=0.408 Sum_probs=58.7
Q ss_pred CCEEEEEEEEEecCCCC------------CeEEEEEEEE-----CCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEc
Q psy17026 320 NDIVIGAVCCRIDPNNG------------RKLYIMTLGC-----LSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQL 382 (435)
Q Consensus 320 ~~~ivG~~~~~~~~~~~------------~~~~i~~i~V-----~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~ 382 (435)
++.++|+..+....+.+ +..++++..| ..+||.+|+|+.||+.+.+-|++.+ ...|.+....
T Consensus 415 ~d~lig~lrlR~p~e~~~r~e~~~~~aivrelhvyg~~vpig~~~~~~QH~G~G~~L~~~AE~ia~ee~-~~ki~viSgi 493 (515)
T COG1243 415 NDILIGFLRLREPSEGAHREEIDDKTAIVRELHVYGSEVPIGKREDEWQHRGYGRELLEEAERIAREEG-AKKILVISGI 493 (515)
T ss_pred hhhhhheeeecccccchhhhhcccchhhhhhhhccccccccccCcchhhcccHHHHHHHHHHHHHHhhc-cccEEEEecc
Confidence 35678988877655422 1111111111 4679999999999999999999999 8998887777
Q ss_pred CCHHHHHHHHhcCcEEEeE
Q psy17026 383 NNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 383 ~N~~a~~~y~k~GF~~~~~ 401 (435)
.+...|+|+||+..|-
T Consensus 494 ---G~ReYy~k~GY~~~gp 509 (515)
T COG1243 494 ---GVREYYRKLGYELDGP 509 (515)
T ss_pred ---cHHHHHHHhCccccCC
Confidence 7999999999998873
No 189
>PRK10456 arginine succinyltransferase; Provisional
Probab=94.73 E-value=0.31 Score=46.41 Aligned_cols=94 Identities=14% Similarity=0.105 Sum_probs=61.4
Q ss_pred EEEEcCCchhHHHHHHHhHhhCCC----CCCHHHHHHHHh-------------cCceEEEEEe--CCEEEEEEEEEecC-
Q psy17026 274 IELGDVTPHNIKQLKRLNTVVFPV----SYNEKFYKDVLE-------------AGELAKLAYY--NDIVIGAVCCRIDP- 333 (435)
Q Consensus 274 ~~ir~~~~~d~~~~~~l~~~~~~~----~~~~~~~~~~~~-------------~~~~~~v~~~--~~~ivG~~~~~~~~- 333 (435)
+.||++...|++++.+|....-.. +-..+.+.+.++ +..+.||+++ .|++||.+.+...-
T Consensus 2 ~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG 81 (344)
T PRK10456 2 MVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVG 81 (344)
T ss_pred eEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEeccc
Confidence 579999999999999997665321 222222222111 2345667764 68999988765311
Q ss_pred ---------------------------------CCCCeEEEEEEEECCCcccCChHHHHHHHHHHHH
Q psy17026 334 ---------------------------------NNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYV 367 (435)
Q Consensus 334 ---------------------------------~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~ 367 (435)
+-.+.-+++.+.++|+||+-|.|+.|-..=.-++
T Consensus 82 ~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~RfLFi 148 (344)
T PRK10456 82 LNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFM 148 (344)
T ss_pred CCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHHHHHH
Confidence 1115678899999999999999987765443333
No 190
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=94.61 E-value=0.048 Score=53.20 Aligned_cols=50 Identities=20% Similarity=0.430 Sum_probs=43.7
Q ss_pred CCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 177 LSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 177 ~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
...||.+|+|++||+.++..|++.| ..++.+..-. ++...|+|+||...|
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~-~~ki~viSgi---G~ReYy~k~GY~~~g 508 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEG-AKKILVISGI---GVREYYRKLGYELDG 508 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhc-cccEEEEecc---cHHHHHHHhCccccC
Confidence 4679999999999999999999999 8888776554 889999999999765
No 191
>PHA01733 hypothetical protein
Probab=94.53 E-value=0.088 Score=43.64 Aligned_cols=89 Identities=18% Similarity=0.251 Sum_probs=55.7
Q ss_pred HhcCCeE-EEEEECCeEEEEEEEEeecCCC-CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCH
Q psy17026 138 LEAGELA-KLAYYNDIVIGAVCCRIDPNNG-RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNND 215 (435)
Q Consensus 138 l~~~~~~-~v~~~~g~iVG~~~~~~~~~~~-~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~ 215 (435)
+..+... +....+|+++|..++...-... ...|+ ...+.-.+ +-+..+.++.....+...+..++-.|...|.
T Consensus 42 ~~~s~~~v~~~~~nG~l~aI~Gv~~d~~~~vG~pWl---V~T~~v~k--~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~ 116 (153)
T PHA01733 42 LDVSENVVAFVAPDGSLAGVAGLVEDMGNRVGEIWM---VCTPAIEK--NPIALLRGAKWWLPKSRNYDLLWNIVDKRNL 116 (153)
T ss_pred hhccccceEEEecCCcEEEEecccccccCCCCceeE---EecHHhHh--CCHHHHHHHHHHHHHhccccHHHHhHhcccH
Confidence 3333434 6666689999988877631111 22222 22222111 3345555555555544347888889999999
Q ss_pred HHHHHHHhCCCEEEEE
Q psy17026 216 VAIDFYKKFGFEIVET 231 (435)
Q Consensus 216 ~a~~~y~k~GF~~~~~ 231 (435)
.+++|.+.+||+....
T Consensus 117 ~hir~Lk~lGF~f~~~ 132 (153)
T PHA01733 117 VHRKLLRKLGFKGLRY 132 (153)
T ss_pred HHHHHHHHcCceeecc
Confidence 9999999999997754
No 192
>PHA00432 internal virion protein A
Probab=94.44 E-value=0.48 Score=38.72 Aligned_cols=83 Identities=10% Similarity=0.079 Sum_probs=49.8
Q ss_pred CCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHH---HHHHHHHHhcCCccEEEEEEEcCCHHH
Q psy17026 141 GELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMML---EHILNYVEKDGNFDSIYLHVQLNNDVA 217 (435)
Q Consensus 141 ~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll---~~~~~~a~~~g~~~~v~l~v~~~N~~a 217 (435)
+..++....+|++++..+ +. ..++.-+++=+|.. . .++.-+... ....+.+.+. +..++-.|...|..+
T Consensus 36 s~~~~~~~~~G~~~aI~G---n~-G~~vW~v~T~~v~~-~-~~~~~reF~k~~~~~ld~ml~~--yp~LwNyV~~~N~~h 107 (137)
T PHA00432 36 DSECVTLSLDGFVLAIGG---NQ-GDQVWFVTSDQVWR-L-TKKEKREFRKLIMEYRDMMLDQ--YPSLWNYVWVGNKSH 107 (137)
T ss_pred CceEEEEecCCeEEEEec---CC-CCceEEEecHHhhh-C-ChhhhHHHHHHHHHHHHHHHHh--hhhhheeeecCCHHH
Confidence 456788888999988763 11 11112233322322 0 011222223 2333333333 678899999999999
Q ss_pred HHHHHhCCCEEEEE
Q psy17026 218 IDFYKKFGFEIVET 231 (435)
Q Consensus 218 ~~~y~k~GF~~~~~ 231 (435)
++|.+.+||+....
T Consensus 108 ir~Lk~lGf~f~~e 121 (137)
T PHA00432 108 IRFLKSIGAVFHNE 121 (137)
T ss_pred HHHHHHcCeeeecc
Confidence 99999999998765
No 193
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=94.16 E-value=2.7 Score=34.42 Aligned_cols=121 Identities=12% Similarity=0.050 Sum_probs=70.7
Q ss_pred EEEcCCchhHHHHHHHhHhh----------CCCC-----CC-HHHHHHHHhcCceEEEEE-eCCEEEEEEEEEecCCCC-
Q psy17026 275 ELGDVTPHNIKQLKRLNTVV----------FPVS-----YN-EKFYKDVLEAGELAKLAY-YNDIVIGAVCCRIDPNNG- 336 (435)
Q Consensus 275 ~ir~~~~~d~~~~~~l~~~~----------~~~~-----~~-~~~~~~~~~~~~~~~v~~-~~~~ivG~~~~~~~~~~~- 336 (435)
..|++++.|++.+..+.... +++. .+ ....-.......+.|++. .++++.||+.........
T Consensus 2 ~yR~f~e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~Alrfy~RsgHSFvA~~e~~~~~GfvLAQaVWQGdr 81 (161)
T PF09390_consen 2 RYRPFTEPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAALRFYERSGHSFVAEDEGGELQGFVLAQAVWQGDR 81 (161)
T ss_dssp EEE---GGGHHHHHHC--------------------STTS---HHHHHHHHCCS--EEEE-ETTEEEEEEEEEEEE-SSS
T ss_pred cccccCcccHHHHHHHhhhccccccccccccccccccccccCCHHHhhhhhccCCcEEEEccCCceeeeeehhHHhcCCC
Confidence 56889999999998874222 1111 11 112233445677889998 889999999765444333
Q ss_pred CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEe
Q psy17026 337 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 400 (435)
Q Consensus 337 ~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~ 400 (435)
....+..|.+.| -+......-||.++.+-+...+ +..+.+.+.+ ....-.+..||...+
T Consensus 82 ptVlV~ri~~~~-~~~~~~~~GLLrAvvKSAYDa~-VYEv~l~l~p---~l~~A~~a~~~~~~~ 140 (161)
T PF09390_consen 82 PTVLVRRILLAP-GEPEEVYEGLLRAVVKSAYDAG-VYEVHLHLDP---ELEAAARAEGFRLGG 140 (161)
T ss_dssp EEEEEEEE---E-ESSHHHHHHHHHHHHHHHHHTT--SEEEE---T---HHHHHHHHTT----S
T ss_pred ceEEEEEeecCC-CCcHHHHHHHHHHHHHhhhccc-eEEEEeeCCH---HHHHHHhhcccccCC
Confidence 566676665555 4456788899999999999999 8888888887 677777888998766
No 194
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=93.51 E-value=0.32 Score=37.67 Aligned_cols=70 Identities=11% Similarity=0.148 Sum_probs=48.6
Q ss_pred EEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHH
Q psy17026 315 KLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY 391 (435)
Q Consensus 315 ~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y 391 (435)
+-++.++...|.+.+..........++..++|.+..||+|+|..|++.+.+.. ..+.-.+..+|+ ..++|
T Consensus 11 ~~~y~~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~------~~L~Wrsr~~n~-~n~Wy 80 (99)
T cd04264 11 HAIYLSEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRDF------PKLFWRSRKTNP-INPWY 80 (99)
T ss_pred eEEEEeCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhC------CceEEEeCCCCc-ccceE
Confidence 44455556777777765442235689999999999999999999999887752 235556666664 34444
No 195
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=93.33 E-value=0.4 Score=41.53 Aligned_cols=59 Identities=15% Similarity=0.244 Sum_probs=41.3
Q ss_pred CceEEEEEe--C--CEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcC
Q psy17026 311 GELAKLAYY--N--DIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 371 (435)
Q Consensus 311 ~~~~~v~~~--~--~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g 371 (435)
+..++|+.+ + -.+|||-.=..... ...-+..|.|.|.||++|+|+.|+...=...+.++
T Consensus 51 ~F~FYVl~e~d~~g~h~vGyFSKEk~s~--~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 51 PFLFYVLTEKDDDGFHIVGYFSKEKESW--DNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp TEEEEEEEEEETTEEEEEEEEEEESS-T--T-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEEEecCccceeEEEEEEEeccc--CCeeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 445566554 2 35888865443332 33568899999999999999999999888888776
No 196
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=93.17 E-value=0.71 Score=43.88 Aligned_cols=92 Identities=5% Similarity=0.006 Sum_probs=59.2
Q ss_pred EEcCCchhHHHHHHHhHhhCCC----CCCHHHHHHHH-----------h---cCceEEEEEe--CCEEEEEEEEEecC--
Q psy17026 276 LGDVTPHNIKQLKRLNTVVFPV----SYNEKFYKDVL-----------E---AGELAKLAYY--NDIVIGAVCCRIDP-- 333 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~~~----~~~~~~~~~~~-----------~---~~~~~~v~~~--~~~ivG~~~~~~~~-- 333 (435)
||++...|++++.+|....-.. +-..+.+.+.+ . +..+.||+++ .|++||.+.+...-
T Consensus 2 iRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~ 81 (336)
T TIGR03245 2 VRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAGY 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEecccC
Confidence 6899999999999997654321 11122111111 1 2345667764 68999988765311
Q ss_pred --------------------------------CCCCeEEEEEEEECCCcccCChHHHHHHHHHHHH
Q psy17026 334 --------------------------------NNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYV 367 (435)
Q Consensus 334 --------------------------------~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~ 367 (435)
+-.+.-+++.+.++|+||+-|.|+.|-+.=.-++
T Consensus 82 ~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~RfLFi 147 (336)
T TIGR03245 82 GEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLLFM 147 (336)
T ss_pred CCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHHHHH
Confidence 1115678999999999999999987766444333
No 197
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=93.16 E-value=0.72 Score=43.87 Aligned_cols=89 Identities=16% Similarity=0.087 Sum_probs=58.1
Q ss_pred EEcCCchhHHHHHHHhHhhCCC----CCCHHHHHHHHh-------------cCceEEEEEe--CCEEEEEEEEEecC---
Q psy17026 276 LGDVTPHNIKQLKRLNTVVFPV----SYNEKFYKDVLE-------------AGELAKLAYY--NDIVIGAVCCRIDP--- 333 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~~~----~~~~~~~~~~~~-------------~~~~~~v~~~--~~~ivG~~~~~~~~--- 333 (435)
||++...|++++.+|....-.. +-..+.+.+.++ +..+.||+++ .|++||.+.+...-
T Consensus 2 vRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~~ 81 (336)
T TIGR03244 2 VRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGLE 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 6889999999999997655321 222222222111 1345666665 68999988765311
Q ss_pred -------------------------------CCCCeEEEEEEEECCCcccCChHHHHHHHHH
Q psy17026 334 -------------------------------NNGRKLYIMTLGCLSPYRRLGIGSMMLEHIL 364 (435)
Q Consensus 334 -------------------------------~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~ 364 (435)
+-.+.-+++.+.++|+||+-|.|+.|-+.=.
T Consensus 82 ~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~Rf 143 (336)
T TIGR03244 82 EPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSRF 143 (336)
T ss_pred CCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHHH
Confidence 1115678999999999999999987765433
No 198
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.04 E-value=1.8 Score=38.07 Aligned_cols=120 Identities=13% Similarity=0.189 Sum_probs=82.5
Q ss_pred cCCchhHHHHHHHhHhhCCC--CCC----HHHHHHHHhcCceEEE-E-EeCCEEEEEEEEEecC----------------
Q psy17026 278 DVTPHNIKQLKRLNTVVFPV--SYN----EKFYKDVLEAGELAKL-A-YYNDIVIGAVCCRIDP---------------- 333 (435)
Q Consensus 278 ~~~~~d~~~~~~l~~~~~~~--~~~----~~~~~~~~~~~~~~~v-~-~~~~~ivG~~~~~~~~---------------- 333 (435)
...+.-++++..+..+.|.+ .|. .....+..++....|+ + ..+|+++|++-+.+..
T Consensus 11 ~~~~~~l~em~rlR~~vF~erL~W~v~~~~g~E~DqyD~~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~ 90 (209)
T COG3916 11 ELFPKALEEMHRLRYQVFKERLGWDVVCIDGFEIDQYDNLDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEGG 90 (209)
T ss_pred hhcHHHHHHHHHHHHHHHHHhcCCceeccCCccccccCCCCceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcCC
Confidence 34456677888888888754 343 2222333344444443 4 5689999988765422
Q ss_pred ---CCCCeEEEEEEEECC--Cc---ccCCh-HHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 334 ---NNGRKLYIMTLGCLS--PY---RRLGI-GSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 334 ---~~~~~~~i~~i~V~p--~~---rgkGl-g~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
..++..+...++|++ .- .+... +..|+.-+++++...| ++.|...+.. ...+.+++.||.....
T Consensus 91 ~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G-~~~IvtVt~~---~meril~r~Gw~~~ri 163 (209)
T COG3916 91 PPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARG-ITGIVTVTDT---GMERILRRAGWPLTRI 163 (209)
T ss_pred CCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcC-CceEEEEEch---HHHHHHHHcCCCeEEc
Confidence 122678888998886 22 23333 6688889999999999 9999888877 7999999999987654
No 199
>KOG2036|consensus
Probab=93.00 E-value=0.31 Score=50.08 Aligned_cols=85 Identities=25% Similarity=0.346 Sum_probs=61.3
Q ss_pred CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEE---------------------------------------
Q psy17026 337 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIY--------------------------------------- 377 (435)
Q Consensus 337 ~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~--------------------------------------- 377 (435)
.-+.|..|+|+|+|++-|||++.++.+.++...+. ..+.
T Consensus 613 ~GaRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~~--~~i~e~~~~~~~~~k~v~e~~~vsllee~i~pR~~lppLL~~L 690 (1011)
T KOG2036|consen 613 SGARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGKF--TSISEDVLAVDHSIKRVEEAEKVSLLEEQIKPRKDLPPLLLKL 690 (1011)
T ss_pred cCceEEEEEeccchhccCccHHHHHHHHHHHhccC--CCccccccccCccccccchhhhhhhhhhhcccccCCCceeeEc
Confidence 34678999999999999999999999999886543 1111
Q ss_pred ----------EEEE-cCCHHHHHHHHhcCcEEEeEeecccccccccceeeeeecccCC
Q psy17026 378 ----------LHVQ-LNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRNK 424 (435)
Q Consensus 378 ----------l~v~-~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~~~~m~~~l~~~ 424 (435)
+.|. .--....+||+++||.++...... ++-.+.++.+|-+.|..+
T Consensus 691 ~er~perldylGvSfGLT~~L~kFWk~~gF~PvylrQt~-n~lTGEHtcimLk~L~~~ 747 (1011)
T KOG2036|consen 691 SERPPERLDYLGVSFGLTPSLLKFWKKNGFVPVYLRQTS-NDLTGEHTCIMLKTLEGD 747 (1011)
T ss_pred ccCCCcccceeeecccCCHHHHHHHHhcCceeEEeeccc-cccccceeEEEEecCCCc
Confidence 0110 011257899999999999864443 334688999999988743
No 200
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=92.83 E-value=0.87 Score=43.26 Aligned_cols=92 Identities=12% Similarity=0.053 Sum_probs=59.1
Q ss_pred EEcCCchhHHHHHHHhHhhCCC----CCCHH-----------HHHHHHh--cCceEEEEEe--CCEEEEEEEEEecC---
Q psy17026 276 LGDVTPHNIKQLKRLNTVVFPV----SYNEK-----------FYKDVLE--AGELAKLAYY--NDIVIGAVCCRIDP--- 333 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~~~----~~~~~-----------~~~~~~~--~~~~~~v~~~--~~~ivG~~~~~~~~--- 333 (435)
||++...|++++.+|....-.. +-..+ .+..... +..+.||+++ .|+++|.+.+...-
T Consensus 2 vRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~ 81 (335)
T TIGR03243 2 VRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGLD 81 (335)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 6889999999999997654321 11111 2211111 2345567765 68999988765311
Q ss_pred -------------------------------CCCCeEEEEEEEECCCcccCChHHHHHHHHHHHH
Q psy17026 334 -------------------------------NNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYV 367 (435)
Q Consensus 334 -------------------------------~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~ 367 (435)
+-.+.-+++.+.++|+||+-|.|+.|-+.=.-++
T Consensus 82 ~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~RfLFi 146 (335)
T TIGR03243 82 EPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRFLFI 146 (335)
T ss_pred CCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHHHHH
Confidence 1115678999999999999999987766444333
No 201
>PHA00432 internal virion protein A
Probab=92.60 E-value=1.3 Score=36.34 Aligned_cols=82 Identities=15% Similarity=0.178 Sum_probs=48.8
Q ss_pred CceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcc-cCChHHHHHHHH---HHHHHHcCCccEEEEEEEcCCHH
Q psy17026 311 GELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYR-RLGIGSMMLEHI---LNYVEKDGNFDSIYLHVQLNNDV 386 (435)
Q Consensus 311 ~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~r-gkGlg~~Ll~~~---~~~~~~~g~~~~i~l~v~~~N~~ 386 (435)
+..++.+..+|+++|... +.+.-+++ ++..-=.+ -++.-+...+.+ .+.+.++ +..+.-.|...|..
T Consensus 36 s~~~~~~~~~G~~~aI~G-----n~G~~vW~--v~T~~v~~~~~~~~reF~k~~~~~ld~ml~~--yp~LwNyV~~~N~~ 106 (137)
T PHA00432 36 DSECVTLSLDGFVLAIGG-----NQGDQVWF--VTSDQVWRLTKKEKREFRKLIMEYRDMMLDQ--YPSLWNYVWVGNKS 106 (137)
T ss_pred CceEEEEecCCeEEEEec-----CCCCceEE--EecHHhhhCChhhhHHHHHHHHHHHHHHHHh--hhhhheeeecCCHH
Confidence 456888888999988651 21111122 22221111 012223333333 3333332 66788899999999
Q ss_pred HHHHHHhcCcEEEeE
Q psy17026 387 AIDFYKKFGFEIVET 401 (435)
Q Consensus 387 a~~~y~k~GF~~~~~ 401 (435)
+++|.+++||+....
T Consensus 107 hir~Lk~lGf~f~~e 121 (137)
T PHA00432 107 HIRFLKSIGAVFHNE 121 (137)
T ss_pred HHHHHHHcCeeeecc
Confidence 999999999999886
No 202
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=92.50 E-value=3.2 Score=36.13 Aligned_cols=122 Identities=14% Similarity=0.193 Sum_probs=79.1
Q ss_pred EeeCCcccHHHHHHHhHhcC-----CccccHHHHHHHHhcCC---eEEEEEECC-eEEEEEEEEeecCC-------C--C
Q psy17026 106 LGDVTPHNIKQLKRLNTVVF-----PVSYNEKFYKDVLEAGE---LAKLAYYND-IVIGAVCCRIDPNN-------G--R 167 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~~-----~~~~~~~~~~~~l~~~~---~~~v~~~~g-~iVG~~~~~~~~~~-------~--~ 167 (435)
+|++++.|++++..|..... ...++++++..++.+.. ..+|.++++ +|-.++++..-+.. . .
T Consensus 31 lR~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~~k~~~l~ 110 (190)
T PF02799_consen 31 LRPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGNPKHKTLK 110 (190)
T ss_dssp EEE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSSSSSSEEE
T ss_pred cccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceeecCCCCcccee
Confidence 69999999999999976653 23468889999887543 456777654 88888887655421 1 2
Q ss_pred eEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeeccc
Q psy17026 168 KLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYY 236 (435)
Q Consensus 168 ~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~ 236 (435)
.+|.-- .+... -=-++|+..++-.|++.| +...-+.-.-+|. .|.+.+.|..-.-.-+||
T Consensus 111 aAY~fY-~~~~~----~~l~~Lm~DaLi~Ak~~g-fDVFNaLd~mdN~---~fL~~lKFg~GdG~L~YY 170 (190)
T PF02799_consen 111 AAYSFY-YVATS----TRLKELMNDALILAKNEG-FDVFNALDLMDNS---SFLEDLKFGPGDGNLNYY 170 (190)
T ss_dssp EEEEEE-EEESS----SHHHHHHHHHHHHHHHTT-ESEEEEESTTTGG---GTTTTTT-EEEEEEEEEE
T ss_pred eeeeee-eeecC----CCHHHHHHHHHHHHHHcC-CCEEehhhhccch---hhHhhCCccCCCCCeEEE
Confidence 334322 22221 223589999999999999 8887777777774 789999998654444443
No 203
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=92.45 E-value=3.3 Score=46.46 Aligned_cols=177 Identities=12% Similarity=0.070 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeeccccCCCCCCCCCCcc
Q psy17026 187 SMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRNKVPNGEEHKDGNV 266 (435)
Q Consensus 187 ~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~~~~~~~~~~~~~~ 266 (435)
..++....++|+..| ..-++..|.+ .....|.++||.....-....- --...+-..+. ........
T Consensus 298 ~~~i~~F~~~a~~~g-~~p~fy~vse---~~~~~~~~~G~~~lklGeEavv---------dl~~Fsl~Gk~-~~~lR~a~ 363 (1094)
T PRK02983 298 PQAIDAWLALARTYG-WAPAVMGASE---AGARAYREAGLSALELGDEAIL---------DTADFTLSGPD-MRPVRQAV 363 (1094)
T ss_pred HHHHHHHHHHHHHcC-CEEEEEEECH---HHHHHHHHcCCcEEEecceEEE---------ccccCCccCch-hHHHHHHH
Confidence 578999999999999 7778888877 5567899999997664222211 10000000000 00000000
Q ss_pred ccCCCCcEEEE-----cCCchhHHHHHHHhHhhCCCC----CC--HHHHHHHHhcCceEEEEEe-CCEEEEEEEEEecCC
Q psy17026 267 FTMTRPKIELG-----DVTPHNIKQLKRLNTVVFPVS----YN--EKFYKDVLEAGELAKLAYY-NDIVIGAVCCRIDPN 334 (435)
Q Consensus 267 ~~~~~~~~~ir-----~~~~~d~~~~~~l~~~~~~~~----~~--~~~~~~~~~~~~~~~v~~~-~~~ivG~~~~~~~~~ 334 (435)
-+....+++++ ++..+..+++.++...+.... ++ -..+.........++.+.+ +|+++||+.+.....
T Consensus 364 nra~r~G~t~~i~~~~~~~~~~~~~L~~isd~Wl~~~~EkGFSm~LGr~~~~~~~~~~i~~a~d~~G~i~af~s~~p~~~ 443 (1094)
T PRK02983 364 TRVRRAGYTVRIRRHRDLPAEEMAQVIARADAWRDTETERGFSMALGRLGDPADGDCLLVEAHDADGQVVALLSFVPWGR 443 (1094)
T ss_pred HHHHhCCCEEEEeeCCCCCHHHHHHHHHHHHHHhcCCCCCceeeecCcccchhcCceEEEEEECCCCeEEEEEEEeeeCC
Confidence 01123334433 333344566666554443221 12 1112222122222233333 689999999988653
Q ss_pred CCCeEEEEEEEEC-CCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEc
Q psy17026 335 NGRKLYIMTLGCL-SPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQL 382 (435)
Q Consensus 335 ~~~~~~i~~i~V~-p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~ 382 (435)
. ++-.+++-. |+ --.|+-..|+..++.+++++| +..+.+...+
T Consensus 444 ~---g~slDLMRr~pd-apnGvmE~L~~~l~~~~k~~G-~~~~sLg~AP 487 (1094)
T PRK02983 444 R---GLSLDLMRRSPD-APNGVIELMVAELALEAESLG-ITRISLNFAV 487 (1094)
T ss_pred C---CEEEEecccCCC-CCCCHHHHHHHHHHHHHHHcC-CCEEEechhh
Confidence 3 233344443 44 368999999999999999999 9999886654
No 204
>KOG2535|consensus
Probab=92.30 E-value=0.21 Score=46.80 Aligned_cols=50 Identities=16% Similarity=0.424 Sum_probs=42.2
Q ss_pred CcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 349 PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 349 ~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
+||.||+|+.|++.++..++++.+-..|.+.... .....|+|+||+..|-
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGV---GtR~YY~klGY~LdGP 547 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISGV---GTRNYYRKLGYELDGP 547 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEecc---chHHHHHhhCeeecCh
Confidence 6999999999999999999987546777666655 6788999999998773
No 205
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=92.25 E-value=0.91 Score=35.16 Aligned_cols=62 Identities=13% Similarity=0.173 Sum_probs=44.2
Q ss_pred EEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCH
Q psy17026 147 AYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNND 215 (435)
Q Consensus 147 ~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~ 215 (435)
++.++..=|++.+..... ....++..++|.|..||.|+|..|.+++.+. ...+...+.++|+
T Consensus 14 ~y~~e~y~~~aivt~~~~-~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d------~~~L~Wrsr~~n~ 75 (99)
T cd04265 14 IYLSEGYNAAAIVTNEEV-DGVPYLDKFAVSSSAQGEGTGEALWRRLRRD------FPKLFWRSRSTNP 75 (99)
T ss_pred EEEeCCCcEEEEEeccCC-CCceEEEEEEEchhhhhcChHHHHHHHHHhh------CCceEEEeCCCCc
Confidence 334444445555544331 2468999999999999999999999988765 3457778888774
No 206
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=92.03 E-value=3.5 Score=35.45 Aligned_cols=113 Identities=16% Similarity=0.222 Sum_probs=70.8
Q ss_pred eeCCcc-cHHHHHHHhHhcCCccccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEe--ecCCCCeEEEEEEEeCCCccCC
Q psy17026 107 GDVTPH-NIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRI--DPNNGRKLYIMTLGCLSPYRRL 183 (435)
Q Consensus 107 r~~~~~-d~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~--~~~~~~~~~i~~l~V~p~~rg~ 183 (435)
..+..- |.+.|.++....|....+.+.+-..++..... ++.+|..-|.+.+.. ........++.-++|.|..||.
T Consensus 26 ~s~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~l~~~~~~--iy~d~~y~~~AIVt~e~~~~~~~v~yLdKFav~~~~~g~ 103 (170)
T PF04768_consen 26 SSLSEFVDLDKLRALLERSFGGKLDVDHYLDRLNNRLFK--IYVDEDYEGAAIVTPEGPDSNGPVPYLDKFAVSKSAQGS 103 (170)
T ss_dssp SSCCCSS-HHHHHHHHHHHSTSSSBHTTHHHHHHTS-SE--EEEETTSSEEEEEEEE-SCTCTSEEEEEEEEE-HHHHHT
T ss_pred cCccccCCHHHHHHHHHhcccccccHHHHHHHhhccceE--EEEeCCceEEEEEEecCCCCCCCCeEEEEEEecchhhhc
Confidence 444444 89999999999996555555555555433222 222344444444444 2333358999999999999999
Q ss_pred CHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHH--hCCCEE
Q psy17026 184 GIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYK--KFGFEI 228 (435)
Q Consensus 184 GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~--k~GF~~ 228 (435)
|++..+.+++.+. ...+...+..+|+ ..++|- ..|+-.
T Consensus 104 gv~D~vf~~i~~d------~p~L~Wrsr~~n~-~~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 104 GVADNVFNAIRKD------FPKLFWRSREDNP-NNKWYFERSDGSFK 143 (170)
T ss_dssp THHHHHHHHHHHH-------SSEEEEEETT-T-THHHHHHH-SEEEE
T ss_pred CHHHHHHHHHHHh------ccceEEEecCCCC-cccEEEEeeEEEEE
Confidence 9999999998653 2347788888884 556553 355543
No 207
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=91.90 E-value=6.2 Score=33.93 Aligned_cols=114 Identities=14% Similarity=0.158 Sum_probs=67.7
Q ss_pred cCCch-hHHHHHHHhHhhCCCCCCHHHHHHHHh-cCceEEEEEeCCEEEEEEEEEe--cCCCCCeEEEEEEEECCCcccC
Q psy17026 278 DVTPH-NIKQLKRLNTVVFPVSYNEKFYKDVLE-AGELAKLAYYNDIVIGAVCCRI--DPNNGRKLYIMTLGCLSPYRRL 353 (435)
Q Consensus 278 ~~~~~-d~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~ivG~~~~~~--~~~~~~~~~i~~i~V~p~~rgk 353 (435)
.++.- |.+.+..+....|...-....+-+.++ ....+++ ++..-|.+++.. ........++..++|.+..||.
T Consensus 27 s~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~l~~~~~~iy~---d~~y~~~AIVt~e~~~~~~~v~yLdKFav~~~~~g~ 103 (170)
T PF04768_consen 27 SLSEFVDLDKLRALLERSFGGKLDVDHYLDRLNNRLFKIYV---DEDYEGAAIVTPEGPDSNGPVPYLDKFAVSKSAQGS 103 (170)
T ss_dssp SCCCSS-HHHHHHHHHHHSTSSSBHTTHHHHHHTS-SEEEE---ETTSSEEEEEEEE-SCTCTSEEEEEEEEE-HHHHHT
T ss_pred CccccCCHHHHHHHHHhcccccccHHHHHHHhhccceEEEE---eCCceEEEEEEecCCCCCCCCeEEEEEEecchhhhc
Confidence 33444 899999999999854444443433333 3333222 223333334433 2333368999999999999999
Q ss_pred ChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHH-H-hcCcEEEeE
Q psy17026 354 GIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY-K-KFGFEIVET 401 (435)
Q Consensus 354 Glg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y-~-k~GF~~~~~ 401 (435)
|++..+.+.+.+.. . .+...+..+|. .+++| + +-|+-..+.
T Consensus 104 gv~D~vf~~i~~d~---p---~L~Wrsr~~n~-~~~Wyf~rs~G~~~~~~ 146 (170)
T PF04768_consen 104 GVADNVFNAIRKDF---P---KLFWRSREDNP-NNKWYFERSDGSFKRNG 146 (170)
T ss_dssp THHHHHHHHHHHH----S---SEEEEEETT-T-THHHHHHH-SEEEEETT
T ss_pred CHHHHHHHHHHHhc---c---ceEEEecCCCC-cccEEEEeeEEEEECCC
Confidence 99999999885533 2 26666666664 55555 3 448777443
No 208
>PHA01733 hypothetical protein
Probab=91.86 E-value=0.53 Score=39.11 Aligned_cols=87 Identities=18% Similarity=0.137 Sum_probs=55.5
Q ss_pred CceE-EEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHH
Q psy17026 311 GELA-KLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAID 389 (435)
Q Consensus 311 ~~~~-~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~ 389 (435)
...+ +.+.-+|+++|......+..+ +.+...-++...=.+ +-...+..+..++.+..++..+.-.|...|..+++
T Consensus 45 s~~~v~~~~~nG~l~aI~Gv~~d~~~-~vG~pWlV~T~~v~k---~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir 120 (153)
T PHA01733 45 SENVVAFVAPDGSLAGVAGLVEDMGN-RVGEIWMVCTPAIEK---NPIALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRK 120 (153)
T ss_pred cccceEEEecCCcEEEEecccccccC-CCCceeEEecHHhHh---CCHHHHHHHHHHHHHhccccHHHHhHhcccHHHHH
Confidence 3334 555668999987766542111 223333333332222 44556666666666544477788899999999999
Q ss_pred HHHhcCcEEEeE
Q psy17026 390 FYKKFGFEIVET 401 (435)
Q Consensus 390 ~y~k~GF~~~~~ 401 (435)
|.+++||+....
T Consensus 121 ~Lk~lGF~f~~~ 132 (153)
T PHA01733 121 LLRKLGFKGLRY 132 (153)
T ss_pred HHHHcCceeecc
Confidence 999999998765
No 209
>KOG2036|consensus
Probab=91.58 E-value=0.69 Score=47.65 Aligned_cols=82 Identities=26% Similarity=0.356 Sum_probs=58.3
Q ss_pred eEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEE----------------------------------------
Q psy17026 168 KLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIY---------------------------------------- 207 (435)
Q Consensus 168 ~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~---------------------------------------- 207 (435)
.+.|-.++|+|+|++.|+|++.++-+.++...++ ..+.
T Consensus 614 GaRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~~--~~i~e~~~~~~~~~k~v~e~~~vsllee~i~pR~~lppLL~~L~ 691 (1011)
T KOG2036|consen 614 GARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGKF--TSISEDVLAVDHSIKRVEEAEKVSLLEEQIKPRKDLPPLLLKLS 691 (1011)
T ss_pred CceEEEEEeccchhccCccHHHHHHHHHHHhccC--CCccccccccCccccccchhhhhhhhhhhcccccCCCceeeEcc
Confidence 4668899999999999999999999998876553 1111
Q ss_pred ---------EEEE-cCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeecc
Q psy17026 208 ---------LHVQ-LNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLR 252 (435)
Q Consensus 208 ---------l~v~-~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~ 252 (435)
+.|. .--+.-.+||+++||.+....... ....++..++|-+.|.
T Consensus 692 er~perldylGvSfGLT~~L~kFWk~~gF~PvylrQt~-n~lTGEHtcimLk~L~ 745 (1011)
T KOG2036|consen 692 ERPPERLDYLGVSFGLTPSLLKFWKKNGFVPVYLRQTS-NDLTGEHTCIMLKTLE 745 (1011)
T ss_pred cCCCcccceeeecccCCHHHHHHHHhcCceeEEeeccc-cccccceeEEEEecCC
Confidence 1111 112355899999999988754433 2345677888888776
No 210
>KOG3698|consensus
Probab=91.37 E-value=1.2 Score=44.67 Aligned_cols=127 Identities=14% Similarity=0.203 Sum_probs=89.1
Q ss_pred EEEEcCCchhHHHHHHHhHhhCCC-----CCC--HHHHH-----HHHh-cCceEEEEEe-CCEEEEEEEEEecCCCC-Ce
Q psy17026 274 IELGDVTPHNIKQLKRLNTVVFPV-----SYN--EKFYK-----DVLE-AGELAKLAYY-NDIVIGAVCCRIDPNNG-RK 338 (435)
Q Consensus 274 ~~ir~~~~~d~~~~~~l~~~~~~~-----~~~--~~~~~-----~~~~-~~~~~~v~~~-~~~ivG~~~~~~~~~~~-~~ 338 (435)
+.|||++..|.+.+..+....+.+ ++. ..... -.+. ....|+++.+ ++++|||++...+.... +.
T Consensus 680 y~iRPy~~~De~~v~~~ct~my~d~g~~lpf~n~pn~~~d~liggllsls~~lC~v~~de~~~i~gYa~a~~Dvt~F~rn 759 (891)
T KOG3698|consen 680 YDIRPYTIADEEYVSGMCTVMYTDNGELLPFRNAPNFADDNLIGGLLSLSEHLCEVVDDEGHKIVGYASAHFDVTLFSRN 759 (891)
T ss_pred EeeccCccccHHHHHhhhhheeccCceeccCCCCCccccccchhheeccChhheeeeecCCCceeEEeeeecccchhhhc
Confidence 689999999999999987665522 111 11111 1111 3457888876 46699999876543211 00
Q ss_pred EEE---------------------------------------------------------EEEEECCCcccCChHHHHHH
Q psy17026 339 LYI---------------------------------------------------------MTLGCLSPYRRLGIGSMMLE 361 (435)
Q Consensus 339 ~~i---------------------------------------------------------~~i~V~p~~rgkGlg~~Ll~ 361 (435)
+.| ...+++.+.-.-|+.+++++
T Consensus 760 ~~i~w~~~l~EKY~~~i~p~~~g~~~~~~~e~i~~S~h~~~~~~~~~~~P~~~~~nfPa~v~~~~~~~a~D~~~~k~m~~ 839 (891)
T KOG3698|consen 760 FLITWKEKLKEKYRGLIEPIGSGKLTDEYIEFIQNSQHPMDIEEWYPKIPDQIFENFPAWVETYFGMDASDAHPMKKMIQ 839 (891)
T ss_pred eeeeeHHHHHHHhhccccccCCchhHHHHHHHHHHccCccchhhccccCcHHHHhcChHHHhhccccccccchHHHHHHH
Confidence 011 01344455567799999999
Q ss_pred HHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 362 HILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 362 ~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
.++..++.+| ..-..+.|..+...-++||-++||..++.
T Consensus 840 vll~tL~aNG-srGaf~~V~~dD~~~~~fys~lG~~d~~~ 878 (891)
T KOG3698|consen 840 VLLVTLAANG-SRGAFLTVAIDDIERQKFYSELGLTDLGL 878 (891)
T ss_pred HHHHHHHhcC-CcceeEEechhHHHHHHHHHHhchHHHhH
Confidence 9999999999 89999999999999999999999987765
No 211
>KOG3698|consensus
Probab=91.37 E-value=1.1 Score=45.08 Aligned_cols=129 Identities=12% Similarity=0.152 Sum_probs=89.4
Q ss_pred CceEEeeCCcccHHHHHHHhHhcCCc-----ccc--HH-----HHHHHHh-cCCeEEEEEE-CCeEEEEEEEEeecCCC-
Q psy17026 102 PKIELGDVTPHNIKQLKRLNTVVFPV-----SYN--EK-----FYKDVLE-AGELAKLAYY-NDIVIGAVCCRIDPNNG- 166 (435)
Q Consensus 102 ~~i~ir~~~~~d~~~l~~l~~~~~~~-----~~~--~~-----~~~~~l~-~~~~~~v~~~-~g~iVG~~~~~~~~~~~- 166 (435)
+-..|||.+..|-+.+..+....+.. |+. +. .+...+. ..+.+.++.+ ++++||+++...+..-.
T Consensus 678 ~~y~iRPy~~~De~~v~~~ct~my~d~g~~lpf~n~pn~~~d~liggllsls~~lC~v~~de~~~i~gYa~a~~Dvt~F~ 757 (891)
T KOG3698|consen 678 MFYDIRPYTIADEEYVSGMCTVMYTDNGELLPFRNAPNFADDNLIGGLLSLSEHLCEVVDDEGHKIVGYASAHFDVTLFS 757 (891)
T ss_pred eeEeeccCccccHHHHHhhhhheeccCceeccCCCCCccccccchhheeccChhheeeeecCCCceeEEeeeecccchhh
Confidence 34789999999999999987776521 111 11 1122222 2345667766 56799999976554310
Q ss_pred CeE---------------------------------------------------------EEEEEEeCCCccCCCHHHHH
Q psy17026 167 RKL---------------------------------------------------------YIMTLGCLSPYRRLGIGSMM 189 (435)
Q Consensus 167 ~~~---------------------------------------------------------~i~~l~V~p~~rg~GiG~~L 189 (435)
+.+ .....+++.+.-.-|+.+.+
T Consensus 758 rn~~i~w~~~l~EKY~~~i~p~~~g~~~~~~~e~i~~S~h~~~~~~~~~~~P~~~~~nfPa~v~~~~~~~a~D~~~~k~m 837 (891)
T KOG3698|consen 758 RNFLITWKEKLKEKYRGLIEPIGSGKLTDEYIEFIQNSQHPMDIEEWYPKIPDQIFENFPAWVETYFGMDASDAHPMKKM 837 (891)
T ss_pred hceeeeeHHHHHHHhhccccccCCchhHHHHHHHHHHccCccchhhccccCcHHHHhcChHHHhhccccccccchHHHHH
Confidence 000 01112234445567999999
Q ss_pred HHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 190 LEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 190 l~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
++-++..++..| +.-.++.|..+..+-++||.++||.-.++
T Consensus 838 ~~vll~tL~aNG-srGaf~~V~~dD~~~~~fys~lG~~d~~~ 878 (891)
T KOG3698|consen 838 IQVLLVTLAANG-SRGAFLTVAIDDIERQKFYSELGLTDLGL 878 (891)
T ss_pred HHHHHHHHHhcC-CcceeEEechhHHHHHHHHHHhchHHHhH
Confidence 999999999999 99999999999999999999999986654
No 212
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=91.37 E-value=2.8 Score=34.17 Aligned_cols=78 Identities=13% Similarity=0.143 Sum_probs=57.6
Q ss_pred HHHHHHHHhcC---CeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEE
Q psy17026 131 EKFYKDVLEAG---ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIY 207 (435)
Q Consensus 131 ~~~~~~~l~~~---~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~ 207 (435)
...+...+..+ ...+-...+|++||++.+..-+... .-.-.+-+|++...++|+-.+-.-++.|++.| ..-++
T Consensus 25 ~~~y~~fl~~~~~~t~~~~~~~~~kLiav~v~D~l~~gl---SaVY~fyDPd~~~~SlG~~~iL~eI~~a~~~~-l~y~Y 100 (128)
T PF04377_consen 25 QEQYRRFLCSSPLGTYHLEYRLDGKLIAVAVVDILPDGL---SAVYTFYDPDYSKRSLGTYSILREIELARELG-LPYYY 100 (128)
T ss_pred HHHHHHHHhCCCCCCEEEEEEeCCeEEEEEEeecccchh---hheeeeeCCCccccCcHHHHHHHHHHHHHHcC-CCEEe
Confidence 45556665532 3344556799999998888776542 22334569999999999999999999999999 88888
Q ss_pred EEEEc
Q psy17026 208 LHVQL 212 (435)
Q Consensus 208 l~v~~ 212 (435)
+.--.
T Consensus 101 LGY~I 105 (128)
T PF04377_consen 101 LGYWI 105 (128)
T ss_pred eCeEe
Confidence 76544
No 213
>KOG2535|consensus
Probab=91.36 E-value=0.31 Score=45.73 Aligned_cols=49 Identities=16% Similarity=0.432 Sum_probs=39.9
Q ss_pred CccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 179 PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 179 ~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
.||.+|+|+.|++.++..|++..+-.++.+..-. +....|+|+||++.|
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGV---GtR~YY~klGY~LdG 546 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISGV---GTRNYYRKLGYELDG 546 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEecc---chHHHHHhhCeeecC
Confidence 4999999999999999999986546666554433 678999999999876
No 214
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=91.26 E-value=0.89 Score=39.40 Aligned_cols=48 Identities=17% Similarity=0.383 Sum_probs=36.3
Q ss_pred eEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcC
Q psy17026 152 IVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 201 (435)
Q Consensus 152 ~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g 201 (435)
.+|||.+=..... ...-+.-+.|.|.||++|+|+.|++..-..++..|
T Consensus 66 h~vGyFSKEk~s~--~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 66 HIVGYFSKEKESW--DNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp EEEEEEEEESS-T--T-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred eeEEEEEEEeccc--CCeeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 4889876544432 23457788999999999999999999988888877
No 215
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=90.56 E-value=0.79 Score=42.30 Aligned_cols=59 Identities=15% Similarity=0.275 Sum_probs=42.0
Q ss_pred CceEEEEEe----CCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcC
Q psy17026 311 GELAKLAYY----NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 371 (435)
Q Consensus 311 ~~~~~v~~~----~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g 371 (435)
+..++|+.+ +..+|||-.=...... ..-+..|.|.|.||++|+|+-|++..=+..+.+|
T Consensus 126 ~FlFYVl~e~d~~g~h~vGYFSKEK~s~~--~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 126 PFLFYVMTEVDDHGSHIVGYFSKEKVSAE--DYNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred ceEEEEEEEecCCCcEEEEEeceeccccC--CCcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 445566553 3468998554433321 1348899999999999999999998887777766
No 216
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=89.98 E-value=9.6 Score=34.75 Aligned_cols=80 Identities=9% Similarity=0.059 Sum_probs=59.9
Q ss_pred cHHHHHHHHhcC---CeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEE
Q psy17026 130 NEKFYKDVLEAG---ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSI 206 (435)
Q Consensus 130 ~~~~~~~~l~~~---~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v 206 (435)
+...+..++..+ ...+-...+|++||.+.+..-.+.. .-.-.+-+|++-.+++|+-.+-.-++.|++.| ..-+
T Consensus 129 ~~~~y~~Fl~~~~~~t~~~ey~~~g~LiaVav~D~l~d~l---SAVY~FyDPd~~~~SLG~~~iL~qI~~ak~~g-l~y~ 204 (240)
T PRK01305 129 SRDQYAQFLEDSWVNTRFIEFRGDGKLVAVAVTDVLDDGL---SAVYTFYDPDEEHRSLGTFAILWQIELAKRLG-LPYV 204 (240)
T ss_pred CHHHHHHHHhcCCCCcEEEEEEeCCeEEEEEEEeccCCce---eeEEEeeCCCccccCCHHHHHHHHHHHHHHcC-CCeE
Confidence 456667776643 2334445699999999888777542 23345679999999999999999999999999 8888
Q ss_pred EEEEEcC
Q psy17026 207 YLHVQLN 213 (435)
Q Consensus 207 ~l~v~~~ 213 (435)
++.-...
T Consensus 205 YLGY~I~ 211 (240)
T PRK01305 205 YLGYWIK 211 (240)
T ss_pred eeeEEEC
Confidence 8876543
No 217
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=89.90 E-value=6.6 Score=40.03 Aligned_cols=176 Identities=10% Similarity=0.151 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeecccccCCCCceEEEEeeccccCCCCCCCCCCc
Q psy17026 186 GSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRNKVPNGEEHKDGN 265 (435)
Q Consensus 186 G~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~d~~~m~~~l~~~~~~~~~~~~~~ 265 (435)
..+|+.+..+.|..+| ...++..|.+ ...+.|..+|++....-. ++.+-....+- ......+.
T Consensus 271 ~~eli~~F~e~A~~~G-~r~~fy~vs~---~~~p~y~d~Gl~~~klGE---------eA~Vdl~~Fsl----~Gk~~~~~ 333 (538)
T COG2898 271 WPELIWAFLELADRHG-WRPVFYGVSE---EGAPLYADAGLRALKLGE---------EAVVDLANFSL----SGKRMRGL 333 (538)
T ss_pred hHHHHHHHHHHHHhcC-CeeEEEEeCc---cccHHHHhcCcceeeccc---------eEEEehhhccc----cCcccccH
Confidence 5699999999999999 8999999888 468999999999765422 22221111110 00011011
Q ss_pred ccc---CCCCcE--EEEc--CCchhHHHHHHHhHhhCC--CC----CCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEec
Q psy17026 266 VFT---MTRPKI--ELGD--VTPHNIKQLKRLNTVVFP--VS----YNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRID 332 (435)
Q Consensus 266 ~~~---~~~~~~--~ir~--~~~~d~~~~~~l~~~~~~--~~----~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~ 332 (435)
-.. ..+.++ +|++ ..++.++++..+-..+.. .. ++-..++....+...+.++..+|+++||+.+...
T Consensus 334 R~a~~r~~r~G~tfeI~~~~~~~~~l~eL~~iSD~Wl~~~~~rEkgFsLG~fdp~yl~~~~va~~~~~g~VvaFa~l~~~ 413 (538)
T COG2898 334 RQAVNRADREGLTFEIVPPDQSPAELDELRAISDEWLDHKTRREKGFSLGFFDPRYLDIFPVAAVDNEGEVVAFANLMPT 413 (538)
T ss_pred HHHHHHHHhcCcEEEEeCCccChHHHHHHHHhCHHhhhcCCcccceeeccCCCccccccceeeEEcCCCCeEEEEeeccc
Confidence 000 112222 3333 223345566655443321 11 1111111111122234455668889999998876
Q ss_pred CCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEE
Q psy17026 333 PNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQ 381 (435)
Q Consensus 333 ~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~ 381 (435)
... ....+.-+--+|+. -+|+-..|+..++.+++++| ++++.+.-.
T Consensus 414 ~~~-~~~SlDlMR~sp~a-p~g~mdfLf~~li~~aKe~G-~~~fsLgmA 459 (538)
T COG2898 414 GGK-EGYSLDLMRRSPDA-PNGTMDFLFSELILWAKEEG-YQRFSLGMA 459 (538)
T ss_pred CCc-ceeEEEeeecCCCC-CchHHHHHHHHHHHHHHHcC-CeEEecCCc
Confidence 653 22344444444444 36899999999999999999 999888653
No 218
>KOG4601|consensus
Probab=89.88 E-value=2.1 Score=38.00 Aligned_cols=56 Identities=16% Similarity=0.296 Sum_probs=39.6
Q ss_pred CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHh-CCC
Q psy17026 167 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKK-FGF 226 (435)
Q Consensus 167 ~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k-~GF 226 (435)
....|.+++|+++.|+.|.|+.|++++++. .+ ...--+.+..-+....+|.+| .|-
T Consensus 107 e~lcILDFyVheS~QR~G~G~~lfdyMl~k---E~-vephQ~a~DrPS~kLl~Fm~khYgl 163 (264)
T KOG4601|consen 107 EALCILDFYVHESEQRSGNGFKLFDYMLKK---EN-VEPHQCAFDRPSAKLLQFMEKHYGL 163 (264)
T ss_pred CCceEEEEEeehhhhhcCchHHHHHHHHHh---cC-CCchheeccChHHHHHHHHHHhcCc
Confidence 457799999999999999999999999864 33 444444454434455677664 444
No 219
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=89.29 E-value=17 Score=33.15 Aligned_cols=96 Identities=10% Similarity=0.075 Sum_probs=67.4
Q ss_pred CHHHHHHHHhcC---ceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEE
Q psy17026 300 NEKFYKDVLEAG---ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSI 376 (435)
Q Consensus 300 ~~~~~~~~~~~~---~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i 376 (435)
+...+...+... ...+-...+|++||.+++...++.- --....-+|++...++|+..+-.-++++++.| ...+
T Consensus 129 ~~~~y~~Fl~~~~~~t~~~ey~~~g~LiaVav~D~l~d~l---SAVY~FyDPd~~~~SLG~~~iL~qI~~ak~~g-l~y~ 204 (240)
T PRK01305 129 SRDQYAQFLEDSWVNTRFIEFRGDGKLVAVAVTDVLDDGL---SAVYTFYDPDEEHRSLGTFAILWQIELAKRLG-LPYV 204 (240)
T ss_pred CHHHHHHHHhcCCCCcEEEEEEeCCeEEEEEEEeccCCce---eeEEEeeCCCccccCCHHHHHHHHHHHHHHcC-CCeE
Confidence 345566666522 2233345689999999888877653 22244579999999999999999999999999 9999
Q ss_pred EEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 377 YLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 377 ~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
.+.....+ ..++--|.-|++...
T Consensus 205 YLGY~I~~--c~kM~YK~~f~P~E~ 227 (240)
T PRK01305 205 YLGYWIKG--SRKMNYKARFRPLEI 227 (240)
T ss_pred eeeEEECC--CCcccccccCCccee
Confidence 99887765 333444555555544
No 220
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=89.27 E-value=1.2 Score=41.18 Aligned_cols=50 Identities=16% Similarity=0.387 Sum_probs=37.8
Q ss_pred CCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcC
Q psy17026 150 NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 201 (435)
Q Consensus 150 ~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g 201 (435)
+-.+|||.+=...... ..-+.-+.|.|.||++|+|+.|++..-...+..|
T Consensus 139 g~h~vGYFSKEK~s~~--~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 139 GSHIVGYFSKEKVSAE--DYNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred CcEEEEEeceeccccC--CCcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 3458998765443321 1247788899999999999999999888887776
No 221
>PTZ00064 histone acetyltransferase; Provisional
Probab=89.27 E-value=0.88 Score=45.09 Aligned_cols=59 Identities=15% Similarity=0.151 Sum_probs=41.2
Q ss_pred CceEEEEEe----CCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcC
Q psy17026 311 GELAKLAYY----NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 371 (435)
Q Consensus 311 ~~~~~v~~~----~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g 371 (435)
+..+||+.+ +-.+|||-.=..... ...-+.+|.|.|.||++|+|+.|+...=...+.+|
T Consensus 355 pFlFYVLtE~D~~G~HiVGYFSKEK~S~--~~nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 355 PFLFYIVTEVDEEGCHIVGYFSKEKVSL--LHYNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred ceEEEEEEEecCCCcEEEEEecccccCc--ccCceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 444555543 347888754333221 12348899999999999999999998877777666
No 222
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=89.21 E-value=1.4 Score=34.08 Aligned_cols=67 Identities=12% Similarity=0.162 Sum_probs=44.0
Q ss_pred EEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHH
Q psy17026 317 AYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY 391 (435)
Q Consensus 317 ~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y 391 (435)
++.++..-|++.+..... ....++..++|.+..||+|+|..|++.+.+.. ..+.-.+..+|+ ..++|
T Consensus 14 ~y~~e~y~~~aivt~~~~-~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~------~~L~Wrsr~~n~-~n~Wy 80 (99)
T cd04265 14 IYLSEGYNAAAIVTNEEV-DGVPYLDKFAVSSSAQGEGTGEALWRRLRRDF------PKLFWRSRSTNP-INPWY 80 (99)
T ss_pred EEEeCCCcEEEEEeccCC-CCceEEEEEEEchhhhhcChHHHHHHHHHhhC------CceEEEeCCCCc-ccceE
Confidence 333444555545544331 25679999999999999999999999887653 235556666664 44444
No 223
>PRK14852 hypothetical protein; Provisional
Probab=88.96 E-value=2.2 Score=46.58 Aligned_cols=143 Identities=17% Similarity=0.187 Sum_probs=95.0
Q ss_pred eEEeeC-CcccHHHHHHHhHhcCC-cccc----HHHH-HHH-HhcCCeEEEEEECCeEEEEEEEEeecCC-C--------
Q psy17026 104 IELGDV-TPHNIKQLKRLNTVVFP-VSYN----EKFY-KDV-LEAGELAKLAYYNDIVIGAVCCRIDPNN-G-------- 166 (435)
Q Consensus 104 i~ir~~-~~~d~~~l~~l~~~~~~-~~~~----~~~~-~~~-l~~~~~~~v~~~~g~iVG~~~~~~~~~~-~-------- 166 (435)
+.+|.+ +++|...+..|....+. ..|. .... ..+ +.+....|++...+++||...+...... +
T Consensus 29 ~~~r~Aet~~e~~~~~~L~~~~Y~~~Gy~~~~ps~~~~~~~~~lp~t~~~i~k~~~~~l~T~t~~~ds~~~Gl~~D~lf~ 108 (989)
T PRK14852 29 PAIKIAETPDEYTRAFRLVYEEYIRSGYLKPHPSRMYYNVWSILPATSVFIFKSYHDVLCTLTHIPDSGLFGLPMDTLYK 108 (989)
T ss_pred cceeecCCHHHHHHHHHHHHHHHHHcCCCCcCcccccCCccccCCcceEEEeccCCcEEEEEEEecCCcccCcCHHHHHH
Confidence 445555 57788888888655542 1221 1111 111 1123344666666777777776666442 1
Q ss_pred -----------CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHh-CCCEEEEEeec
Q psy17026 167 -----------RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKK-FGFEIVETKQH 234 (435)
Q Consensus 167 -----------~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k-~GF~~~~~~~~ 234 (435)
..+.+..++++|+.|..-+--.|++.+..++...+ +..+.+.|++ .-..||++ +||+..+..+.
T Consensus 109 ~eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~-~dd~~i~VnP---kH~~FY~r~l~f~~ig~~r~ 184 (989)
T PRK14852 109 PEVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSE-VDDILVTVNP---KHVKFYTDIFLFKPFGEVRH 184 (989)
T ss_pred HHHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHcC-CCeEEEEECc---chHHHHHHHhCCcccccccc
Confidence 56889999999988888777788888888887776 8888888866 67899995 99999998766
Q ss_pred ccccCCCCceEEEEeecc
Q psy17026 235 YYKRIEPADAYVLQKTLR 252 (435)
Q Consensus 235 ~~~~~~~~d~~~m~~~l~ 252 (435)
|-. -...++.|..++.
T Consensus 185 ~p~--VnaPAvll~~dl~ 200 (989)
T PRK14852 185 YDT--VDAPAVALRIDLH 200 (989)
T ss_pred CCC--CCcchhheecCHH
Confidence 633 1244666666663
No 224
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=88.95 E-value=2.8 Score=34.19 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=64.3
Q ss_pred HHHHHHHHhc---CceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEE
Q psy17026 301 EKFYKDVLEA---GELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIY 377 (435)
Q Consensus 301 ~~~~~~~~~~---~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~ 377 (435)
...+...+.. +....-...+|++||.+++...++.-.. + -..-+|++...++|+..+-.-+++|++.| ...+.
T Consensus 25 ~~~y~~fl~~~~~~t~~~~~~~~~kLiav~v~D~l~~glSa--V-Y~fyDPd~~~~SlG~~~iL~eI~~a~~~~-l~y~Y 100 (128)
T PF04377_consen 25 QEQYRRFLCSSPLGTYHLEYRLDGKLIAVAVVDILPDGLSA--V-YTFYDPDYSKRSLGTYSILREIELARELG-LPYYY 100 (128)
T ss_pred HHHHHHHHhCCCCCCEEEEEEeCCeEEEEEEeecccchhhh--e-eeeeCCCccccCcHHHHHHHHHHHHHHcC-CCEEe
Confidence 3444555442 2333445679999999888877765322 2 23459999999999999999999999998 88888
Q ss_pred EEEEcCCHHHHHHHHhcCcEEEe
Q psy17026 378 LHVQLNNDVAIDFYKKFGFEIVE 400 (435)
Q Consensus 378 l~v~~~N~~a~~~y~k~GF~~~~ 400 (435)
+.-...+ ..++--|..|++..
T Consensus 101 LGY~I~~--c~kM~YK~~f~P~e 121 (128)
T PF04377_consen 101 LGYWIHG--CPKMNYKARFRPHE 121 (128)
T ss_pred eCeEeCC--CCcccchhcCCcee
Confidence 8776654 33333445555443
No 225
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=87.13 E-value=9.7 Score=35.61 Aligned_cols=91 Identities=15% Similarity=0.226 Sum_probs=70.7
Q ss_pred cCceEEEEEeCCEEEEEEEEEecCCCC----CeEEEEEEEECCCcccCChHHHHHHHHHHHHHH---c------CCccEE
Q psy17026 310 AGELAKLAYYNDIVIGAVCCRIDPNNG----RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEK---D------GNFDSI 376 (435)
Q Consensus 310 ~~~~~~v~~~~~~ivG~~~~~~~~~~~----~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~---~------g~~~~i 376 (435)
.+....++...+.+|+.+.+.+..+.. -.+-|.+++|..-|..-|+-..|+.+++-+.++ + ++--.+
T Consensus 167 ~~~NT~IIvYRetPIAiisl~~~~~~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~l 246 (304)
T PF11124_consen 167 NGKNTHIIVYRETPIAIISLVPNKDQSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKL 246 (304)
T ss_pred cCCcceEEEEcCCceEEEEeccccccCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEE
Confidence 344566777788999998887766533 567899999999999999999999999766655 1 212234
Q ss_pred EEEEEcCCHHHHHHHHhcCcEEEe
Q psy17026 377 YLHVQLNNDVAIDFYKKFGFEIVE 400 (435)
Q Consensus 377 ~l~v~~~N~~a~~~y~k~GF~~~~ 400 (435)
.+++.+-.....+..++.||..+.
T Consensus 247 l~d~YSFD~~~~k~L~~~gF~~i~ 270 (304)
T PF11124_consen 247 LVDVYSFDKDMKKTLKKKGFKKIS 270 (304)
T ss_pred EEEeeeccHHHHHHHHHCCCeeee
Confidence 457777778899999999999988
No 226
>PLN03239 histone acetyltransferase; Provisional
Probab=86.58 E-value=1.9 Score=41.04 Aligned_cols=59 Identities=10% Similarity=0.050 Sum_probs=41.4
Q ss_pred CceEEEEEe----CCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcC
Q psy17026 311 GELAKLAYY----NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 371 (435)
Q Consensus 311 ~~~~~v~~~----~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g 371 (435)
+..++|+.+ +-.+|||-.=...... ..-+..|.|.|.||++|+|+.|+...=+..+.+|
T Consensus 184 ~FlFYVl~e~D~~g~h~vGYFSKEK~s~~--~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 184 PFLFYVLCEVDERGFHPVGYYSKEKYSDV--GYNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred ceEEEEEEEecCCceEEEEEeeecccCCC--CCceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 445566654 3467887543332221 1248899999999999999999998877777766
No 227
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=86.57 E-value=1 Score=44.56 Aligned_cols=59 Identities=15% Similarity=0.254 Sum_probs=41.0
Q ss_pred CceEEEEEe----CCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcC
Q psy17026 311 GELAKLAYY----NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 371 (435)
Q Consensus 311 ~~~~~v~~~----~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g 371 (435)
+..++|+.+ +-.+|||-.=...... ..-+.+|.|.|.||++|+|+.|+...=+..+.+|
T Consensus 277 ~FlFYvl~e~d~~g~h~vGyFSKEk~s~~--~~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 277 LFLFYVLCECDDRGCHMVGYFSKEKHSEE--DYNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred ceEEEEEEEecCCCcEEEEEecccccCcC--CCceEEEEecchhhhcchhheehhheehhhhccC
Confidence 445566653 3478998543332222 1348899999999999999999987776666655
No 228
>KOG2696|consensus
Probab=86.55 E-value=1.6 Score=41.49 Aligned_cols=62 Identities=16% Similarity=0.135 Sum_probs=43.9
Q ss_pred EEEEEEEEEecCCCC--CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCH
Q psy17026 322 IVIGAVCCRIDPNNG--RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNND 385 (435)
Q Consensus 322 ~ivG~~~~~~~~~~~--~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~ 385 (435)
.++|+..+.....-. -...|..+-+.|.|||+|+|+.|++.+........ +.+.++|...++
T Consensus 199 ~~~gy~tiyk~y~yid~~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~p--~v~DiTVEdPse 262 (403)
T KOG2696|consen 199 AYVGYYTIYKFYEYIDRIRPRISQMLILPPFQGKGLGSQLYEAIARDYLEEP--TVLDITVEDPSE 262 (403)
T ss_pred eeeeeEEEeehhhhhhhhhhhhheeEEeccccCCchHHHHHHHHHHhhccCC--ceeEEEecCchH
Confidence 367776665443322 34568889999999999999999999997766654 456666665443
No 229
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=86.20 E-value=2.4 Score=40.50 Aligned_cols=103 Identities=14% Similarity=0.226 Sum_probs=70.0
Q ss_pred cccHHHHHHHhHhcCCccccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCC-CCeEEEEEEEeCCCccC-CCHHHH
Q psy17026 111 PHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNN-GRKLYIMTLGCLSPYRR-LGIGSM 188 (435)
Q Consensus 111 ~~d~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~-~~~~~i~~l~V~p~~rg-~GiG~~ 188 (435)
.=|++.+.+|....|.......+|...++.+-. -+..-|.--|.+.+...+.. +...|+..++|.++.+| -|||..
T Consensus 344 ~Ldl~r~q~LI~~SFkRTLd~h~y~~r~~~~La--~~iVsgdY~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~gisd~ 421 (495)
T COG5630 344 DLDLPRLQHLIQSSFKRTLDPHYYETRINTPLA--RAIVSGDYRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEGISDA 421 (495)
T ss_pred hcCcHHHHHHHHHHHhhccCHHHHHHhccCcce--eEEeeccceeeEEEEeeccCCCCCcceeeeeccccccccchHHHH
Confidence 347888999999999888888887777764422 22233444455555544322 25789999999999999 899998
Q ss_pred HHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHH
Q psy17026 189 MLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY 221 (435)
Q Consensus 189 Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y 221 (435)
+..-+-+... ..+.+-...+| .+.++|
T Consensus 422 vfniM~e~fP-----~eL~WRSR~~N-~vNkwY 448 (495)
T COG5630 422 VFNIMREEFP-----NELFWRSRHNN-QVNKWY 448 (495)
T ss_pred HHHHHHHhCc-----HhhhhhhcccC-cchhee
Confidence 8877765543 34555566666 455655
No 230
>KOG2696|consensus
Probab=85.60 E-value=2.3 Score=40.50 Aligned_cols=61 Identities=16% Similarity=0.142 Sum_probs=44.2
Q ss_pred EEEEEEEEeecCCC--CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCH
Q psy17026 153 VIGAVCCRIDPNNG--RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNND 215 (435)
Q Consensus 153 iVG~~~~~~~~~~~--~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~ 215 (435)
++|+..+....... -..-|..+.+.|.||++|+|+.|++.+........ +.+.++|.+.++
T Consensus 200 ~~gy~tiyk~y~yid~~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~p--~v~DiTVEdPse 262 (403)
T KOG2696|consen 200 YVGYYTIYKFYEYIDRIRPRISQMLILPPFQGKGLGSQLYEAIARDYLEEP--TVLDITVEDPSE 262 (403)
T ss_pred eeeeEEEeehhhhhhhhhhhhheeEEeccccCCchHHHHHHHHHHhhccCC--ceeEEEecCchH
Confidence 66777666544332 23457788899999999999999999997777664 566677766443
No 231
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=84.23 E-value=0.53 Score=45.81 Aligned_cols=62 Identities=16% Similarity=0.235 Sum_probs=44.9
Q ss_pred eEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEE-----EEcCCHHHHHHHHhCCCEEEE
Q psy17026 168 KLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLH-----VQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 168 ~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~-----v~~~N~~a~~~y~k~GF~~~~ 230 (435)
.+.|..+.|+|+||+.|+|..-+..+.++..++- +....-. +..+-..-..|+++.||...-
T Consensus 241 aariarvvvhpdyr~dglg~~sv~~a~ewI~eRr-iPEmr~rkHlvetiaqmarynpffe~~gfkylw 307 (593)
T COG2401 241 AARIARVVVHPDYRADGLGQLSVIAALEWIIERR-IPEMRPRKHLVETIAQMARYNPFFEKVGFKYLW 307 (593)
T ss_pred hhheeEEEeccccccCccchhHHHHHHHHHHHhh-ChhhhhhhhHHHHHHHHHhcCchhhhhceeeee
Confidence 3558899999999999999999999999998876 4433321 111111224699999999653
No 232
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=84.18 E-value=17 Score=34.40 Aligned_cols=105 Identities=11% Similarity=0.082 Sum_probs=59.8
Q ss_pred eEEeeC---CcccHHHHHHHhHhcCCcc--ccHHHHHHHHh----cCCeEEEEEE-CCeEEEEEEEEeecCCCCeEEEEE
Q psy17026 104 IELGDV---TPHNIKQLKRLNTVVFPVS--YNEKFYKDVLE----AGELAKLAYY-NDIVIGAVCCRIDPNNGRKLYIMT 173 (435)
Q Consensus 104 i~ir~~---~~~d~~~l~~l~~~~~~~~--~~~~~~~~~l~----~~~~~~v~~~-~g~iVG~~~~~~~~~~~~~~~i~~ 173 (435)
+.+.++ ++++.+++.++........ .........+. .+...+++.. +|+++||+........ ..+..+
T Consensus 133 ~~~~~~~~~~~~~~~el~~i~~~W~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~dgki~af~~~~~~~~~--~~~~~~ 210 (299)
T PF09924_consen 133 FEVVPIPELDPELRDELLEISDEWLKEKERPERGFIMGALEHFDELGLRGFVARVADGKIVAFAIGSPLGGR--DGWSID 210 (299)
T ss_dssp -EEEE-----GGGHHHHHHHHHHHHHHCTHHHHHHHHHHHHTHHHHT-EEEEEEE-TTEEEEEEEEEEEE-T--TEEEEE
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHhcCchhHHHHHhccccchhhcCceEEEEEECCCcEEEEEEEEEccCC--ccEEEE
Confidence 556666 7889999988855543322 11112222222 3456778888 9999999999877731 234444
Q ss_pred EEe-CCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEc
Q psy17026 174 LGC-LSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQL 212 (435)
Q Consensus 174 l~V-~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~ 212 (435)
+.- +|+ --+|+...|+..+++.+++.| +..+.|...+
T Consensus 211 ~~k~~~~-a~~G~~e~l~~~~~~~~~~~g-~~~lnLg~ap 248 (299)
T PF09924_consen 211 FEKADPD-APKGIYEFLNVEFAEHLKAEG-VEYLNLGFAP 248 (299)
T ss_dssp EEEE-TT--STTHHHHHHHHHHHHS--TT---EEE-----
T ss_pred EEecCCC-CCCcHHHHHHHHHHHhhhhCC-ceEEEccccc
Confidence 433 333 457999999999999999888 8888765543
No 233
>PLN03239 histone acetyltransferase; Provisional
Probab=83.94 E-value=2.9 Score=39.85 Aligned_cols=50 Identities=10% Similarity=0.115 Sum_probs=37.4
Q ss_pred CCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcC
Q psy17026 150 NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 201 (435)
Q Consensus 150 ~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g 201 (435)
+-.+|||.+=...... ..-+.-|.|.|.||++|+|+.|++..-...+..|
T Consensus 197 g~h~vGYFSKEK~s~~--~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 197 GFHPVGYYSKEKYSDV--GYNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred ceEEEEEeeecccCCC--CCceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 3468887764433321 1247788899999999999999999888887776
No 234
>PTZ00064 histone acetyltransferase; Provisional
Probab=83.28 E-value=2.7 Score=41.82 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=37.5
Q ss_pred CCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcC
Q psy17026 150 NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 201 (435)
Q Consensus 150 ~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g 201 (435)
+-.+|||.+=...... ..-+.-|.|.|.||++|+|+.|++..-...+..|
T Consensus 368 G~HiVGYFSKEK~S~~--~nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 368 GCHIVGYFSKEKVSLL--HYNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred CcEEEEEecccccCcc--cCceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 3468998764433221 2347788899999999999999999888877766
No 235
>KOG2779|consensus
Probab=83.00 E-value=9.1 Score=36.41 Aligned_cols=101 Identities=14% Similarity=0.139 Sum_probs=66.3
Q ss_pred CCcEEEEcCCchhHHHHHHH---hHhhCCC--------CCCHHHHHHHHhcC----ceEEEE--EeCCEEEEEEEEEe--
Q psy17026 271 RPKIELGDVTPHNIKQLKRL---NTVVFPV--------SYNEKFYKDVLEAG----ELAKLA--YYNDIVIGAVCCRI-- 331 (435)
Q Consensus 271 ~~~~~ir~~~~~d~~~~~~l---~~~~~~~--------~~~~~~~~~~~~~~----~~~~v~--~~~~~ivG~~~~~~-- 331 (435)
..++....+.-.|..++.++ ..+..-+ .|+.+++.-.+..+ ..+..+ ..++++|||++..+
T Consensus 78 p~gf~W~tldv~~~~~l~el~~lL~enyVEd~~~m~rf~Ys~eFl~Wal~~pg~~~~WHiGVRv~~s~kLVaFIsaiP~~ 157 (421)
T KOG2779|consen 78 PTGFRWETLDVSDFKDLEELYNLLNENYVEDDDSMFRFDYSPEFLKWALQPPGWKKEWHIGVRVKSSKKLVAFISAIPAT 157 (421)
T ss_pred CCCceeeccCCccHhHHHHHHhhcccCCCCccccchhhhccHHHHHhhhcCCCCccceEEEEEEecCCceEEEEeccccE
Confidence 34455555555555444444 4443322 35667776666632 222222 33679999987543
Q ss_pred ---cCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcC
Q psy17026 332 ---DPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 371 (435)
Q Consensus 332 ---~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g 371 (435)
.+.....+.|--++|+.+.|+|+++--|++++-+++.-.|
T Consensus 158 irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~g 200 (421)
T KOG2779|consen 158 IRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEG 200 (421)
T ss_pred EEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhh
Confidence 3333377889999999999999999999999998887666
No 236
>PRK14852 hypothetical protein; Provisional
Probab=82.02 E-value=8.8 Score=42.12 Aligned_cols=128 Identities=16% Similarity=0.188 Sum_probs=85.1
Q ss_pred EEEEcC-CchhHHHHHHHhHhhCC-CCCC----HHH-HHHHHh-cCceEEEEEeCCEEEEEEEEEecCCC-C--------
Q psy17026 274 IELGDV-TPHNIKQLKRLNTVVFP-VSYN----EKF-YKDVLE-AGELAKLAYYNDIVIGAVCCRIDPNN-G-------- 336 (435)
Q Consensus 274 ~~ir~~-~~~d~~~~~~l~~~~~~-~~~~----~~~-~~~~~~-~~~~~~v~~~~~~ivG~~~~~~~~~~-~-------- 336 (435)
..++.+ +.+++.++..|....+. ..+. ... +..+-. ....+|++...+.++|...+...... +
T Consensus 29 ~~~r~Aet~~e~~~~~~L~~~~Y~~~Gy~~~~ps~~~~~~~~~lp~t~~~i~k~~~~~l~T~t~~~ds~~~Gl~~D~lf~ 108 (989)
T PRK14852 29 PAIKIAETPDEYTRAFRLVYEEYIRSGYLKPHPSRMYYNVWSILPATSVFIFKSYHDVLCTLTHIPDSGLFGLPMDTLYK 108 (989)
T ss_pred cceeecCCHHHHHHHHHHHHHHHHHcCCCCcCcccccCCccccCCcceEEEeccCCcEEEEEEEecCCcccCcCHHHHHH
Confidence 345655 45678888888655432 1121 111 111111 23345777666777776666555431 1
Q ss_pred -----------CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHh-cCcEEEeEeec
Q psy17026 337 -----------RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKK-FGFEIVETKQH 404 (435)
Q Consensus 337 -----------~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k-~GF~~~~~~~~ 404 (435)
..+++..++++++.|.+-+--.+++.+..++...+ +..+.+.|.+. =..||++ +||+..++.+.
T Consensus 109 ~eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~-~dd~~i~VnPk---H~~FY~r~l~f~~ig~~r~ 184 (989)
T PRK14852 109 PEVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSE-VDDILVTVNPK---HVKFYTDIFLFKPFGEVRH 184 (989)
T ss_pred HHHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHcC-CCeEEEEECcc---hHHHHHHHhCCcccccccc
Confidence 67899999999988888777788888888877766 89999999884 5679994 59999998766
Q ss_pred c
Q psy17026 405 Y 405 (435)
Q Consensus 405 ~ 405 (435)
|
T Consensus 185 ~ 185 (989)
T PRK14852 185 Y 185 (989)
T ss_pred C
Confidence 6
No 237
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=80.80 E-value=3.5 Score=32.02 Aligned_cols=51 Identities=20% Similarity=0.184 Sum_probs=36.4
Q ss_pred cCCeEEEEEECCe-EEEEEEEEeecCC---------------------CCeEEEEEEEeCCCccCCCHHHHHH
Q psy17026 140 AGELAKLAYYNDI-VIGAVCCRIDPNN---------------------GRKLYIMTLGCLSPYRRLGIGSMML 190 (435)
Q Consensus 140 ~~~~~~v~~~~g~-iVG~~~~~~~~~~---------------------~~~~~i~~l~V~p~~rg~GiG~~Ll 190 (435)
+....+++.++++ +||++-+...... ...+.++.++|+|+||+......|+
T Consensus 28 ~~~~h~lv~~~~~~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 28 EHSVHLLVRDKNTEVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CCccEEEEEECCCCEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 3445666666655 9999887544331 1568899999999999998777664
No 238
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=80.46 E-value=1.8 Score=42.25 Aligned_cols=60 Identities=17% Similarity=0.269 Sum_probs=42.8
Q ss_pred EEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEE-----EEcCCHHHHHHHHhcCcEEE
Q psy17026 339 LYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLH-----VQLNNDVAIDFYKKFGFEIV 399 (435)
Q Consensus 339 ~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~-----v~~~N~~a~~~y~k~GF~~~ 399 (435)
..|..+.|+|+||+.|+|..-+.++.+|..++- +-.+.-- +-.....=..|+++.||...
T Consensus 242 ariarvvvhpdyr~dglg~~sv~~a~ewI~eRr-iPEmr~rkHlvetiaqmarynpffe~~gfkyl 306 (593)
T COG2401 242 ARIARVVVHPDYRADGLGQLSVIAALEWIIERR-IPEMRPRKHLVETIAQMARYNPFFEKVGFKYL 306 (593)
T ss_pred hheeEEEeccccccCccchhHHHHHHHHHHHhh-ChhhhhhhhHHHHHHHHHhcCchhhhhceeee
Confidence 468899999999999999999999999998864 2222111 11111122358999999875
No 239
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=80.05 E-value=3.8 Score=37.68 Aligned_cols=87 Identities=15% Similarity=0.098 Sum_probs=53.7
Q ss_pred EEEEcCCchhHHHHHHHhHhhCCC----C-----------CCHHHHHHHHh--cCceEEEEEe--CCEEEEEEEEEecC-
Q psy17026 274 IELGDVTPHNIKQLKRLNTVVFPV----S-----------YNEKFYKDVLE--AGELAKLAYY--NDIVIGAVCCRIDP- 333 (435)
Q Consensus 274 ~~ir~~~~~d~~~~~~l~~~~~~~----~-----------~~~~~~~~~~~--~~~~~~v~~~--~~~ivG~~~~~~~~- 333 (435)
+.+||++..|++++.++....-.. + ++...++.... +...++|.++ .|+++|.+++...-
T Consensus 2 lvvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~vG 81 (336)
T COG3138 2 LVVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAAVG 81 (336)
T ss_pred cccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEeec
Confidence 357999999999999987554211 1 11122222212 2344566666 79999988764311
Q ss_pred ---------------------------------CCCCeEEEEEEEECCCcccCChHHHHH
Q psy17026 334 ---------------------------------NNGRKLYIMTLGCLSPYRRLGIGSMML 360 (435)
Q Consensus 334 ---------------------------------~~~~~~~i~~i~V~p~~rgkGlg~~Ll 360 (435)
+-.+..+++.+.++|++|.-|.|+.|-
T Consensus 82 l~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Lls 141 (336)
T COG3138 82 LNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLS 141 (336)
T ss_pred cCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhh
Confidence 001445677899999999888776553
No 240
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=79.49 E-value=23 Score=33.17 Aligned_cols=91 Identities=15% Similarity=0.201 Sum_probs=68.9
Q ss_pred cCCeEEEEEECCeEEEEEEEEeecCCC----CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhc---------CCccEE
Q psy17026 140 AGELAKLAYYNDIVIGAVCCRIDPNNG----RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKD---------GNFDSI 206 (435)
Q Consensus 140 ~~~~~~v~~~~g~iVG~~~~~~~~~~~----~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~---------g~~~~v 206 (435)
.+...-++...+.+|+.+++..+.... -.+.|..+.|+.-|..-|+-..|+++++-.+++. |.--.+
T Consensus 167 ~~~NT~IIvYRetPIAiisl~~~~~~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~l 246 (304)
T PF11124_consen 167 NGKNTHIIVYRETPIAIISLVPNKDQSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKL 246 (304)
T ss_pred cCCcceEEEEcCCceEEEEeccccccCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEE
Confidence 344556777889999999988776533 4677889999999999999999999996666541 212234
Q ss_pred EEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 207 YLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 207 ~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
.+++-.-.....++.++.||....
T Consensus 247 l~d~YSFD~~~~k~L~~~gF~~i~ 270 (304)
T PF11124_consen 247 LVDVYSFDKDMKKTLKKKGFKKIS 270 (304)
T ss_pred EEEeeeccHHHHHHHHHCCCeeee
Confidence 455566667899999999999775
No 241
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=78.74 E-value=3 Score=41.33 Aligned_cols=50 Identities=16% Similarity=0.374 Sum_probs=37.3
Q ss_pred CCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcC
Q psy17026 150 NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 201 (435)
Q Consensus 150 ~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g 201 (435)
+-.+|||.+=...... ..-+.-|.|.|.||++|+|+.|++..-...+..|
T Consensus 290 g~h~vGyFSKEk~s~~--~~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 290 GCHMVGYFSKEKHSEE--DYNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred CcEEEEEecccccCcC--CCceEEEEecchhhhcchhheehhheehhhhccC
Confidence 3479998764433322 1347788899999999999999998877777666
No 242
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=78.53 E-value=7.5 Score=37.25 Aligned_cols=111 Identities=14% Similarity=0.216 Sum_probs=70.1
Q ss_pred chhHHHHHHHhHhhCCCCCCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecC-CCCCeEEEEEEEECCCccc-CChHHH
Q psy17026 281 PHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDP-NNGRKLYIMTLGCLSPYRR-LGIGSM 358 (435)
Q Consensus 281 ~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~-~~~~~~~i~~i~V~p~~rg-kGlg~~ 358 (435)
.-|++.+..+.+..|-.......+...++.+-. -+...|..-|.+.+...+ .+.+..|+..++|.++.|| -|++..
T Consensus 344 ~Ldl~r~q~LI~~SFkRTLd~h~y~~r~~~~La--~~iVsgdY~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~gisd~ 421 (495)
T COG5630 344 DLDLPRLQHLIQSSFKRTLDPHYYETRINTPLA--RAIVSGDYRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEGISDA 421 (495)
T ss_pred hcCcHHHHHHHHHHHhhccCHHHHHHhccCcce--eEEeeccceeeEEEEeeccCCCCCcceeeeeccccccccchHHHH
Confidence 345677888888888777777776666553332 222334455555555442 2226789999999999999 899999
Q ss_pred HHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHH--HhcCcEEE
Q psy17026 359 MLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY--KKFGFEIV 399 (435)
Q Consensus 359 Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y--~k~GF~~~ 399 (435)
+.+-+-+..-.+- ..-..-+| .+.+|| ++-|+-..
T Consensus 422 vfniM~e~fP~eL-----~WRSR~~N-~vNkwYf~rSvg~lk~ 458 (495)
T COG5630 422 VFNIMREEFPNEL-----FWRSRHNN-QVNKWYFARSVGYLKQ 458 (495)
T ss_pred HHHHHHHhCcHhh-----hhhhcccC-cchheeeehhhehhhc
Confidence 9887776654332 22222333 566666 35565544
No 243
>KOG2747|consensus
Probab=78.20 E-value=3.4 Score=40.05 Aligned_cols=60 Identities=17% Similarity=0.323 Sum_probs=38.2
Q ss_pred cCceEEEEEeCCE--EEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcC
Q psy17026 310 AGELAKLAYYNDI--VIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 371 (435)
Q Consensus 310 ~~~~~~v~~~~~~--ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g 371 (435)
++..++|+...+. .|||- ..........-+..|-|.|-||++|+|+.|++..=..-+.+|
T Consensus 232 dpFlFYVlte~d~~G~VGYF--SKEK~s~~~yNlaCILtLPpyQRkGYGklLIdFSYeLSr~E~ 293 (396)
T KOG2747|consen 232 DPFLFYVLTECDSYGCVGYF--SKEKESSENYNLACILTLPPYQRKGYGKLLIDFSYELSRREG 293 (396)
T ss_pred cceEEEEEEecCCcceeeee--ccccccccccceeeeeecChhhhcccchhhhhhhhhhhcccC
Confidence 3455666655332 35543 222222122448889999999999999999987766655555
No 244
>KOG4601|consensus
Probab=78.10 E-value=4.6 Score=35.91 Aligned_cols=53 Identities=15% Similarity=0.226 Sum_probs=37.4
Q ss_pred CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHh
Q psy17026 337 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKK 393 (435)
Q Consensus 337 ~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k 393 (435)
....|.+++|++.-|+.|.|..|++++++. ++ .+.-.+.++......++|.+|
T Consensus 107 e~lcILDFyVheS~QR~G~G~~lfdyMl~k---E~-vephQ~a~DrPS~kLl~Fm~k 159 (264)
T KOG4601|consen 107 EALCILDFYVHESEQRSGNGFKLFDYMLKK---EN-VEPHQCAFDRPSAKLLQFMEK 159 (264)
T ss_pred CCceEEEEEeehhhhhcCchHHHHHHHHHh---cC-CCchheeccChHHHHHHHHHH
Confidence 567899999999999999999999988763 33 333333443333356677664
No 245
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=76.66 E-value=17 Score=31.01 Aligned_cols=139 Identities=14% Similarity=0.150 Sum_probs=80.5
Q ss_pred CchhHHHHHHHhHhhCCC--CCCHHHHHHHHh----cCceEEEEEeCCEEEEEEEE-----EecCCCCCeEEEEEEEECC
Q psy17026 280 TPHNIKQLKRLNTVVFPV--SYNEKFYKDVLE----AGELAKLAYYNDIVIGAVCC-----RIDPNNGRKLYIMTLGCLS 348 (435)
Q Consensus 280 ~~~d~~~~~~l~~~~~~~--~~~~~~~~~~~~----~~~~~~v~~~~~~ivG~~~~-----~~~~~~~~~~~i~~i~V~p 348 (435)
+..|..++.++....++. .++...++...+ .+..-.+.++..-+++-+.+ .+...+--.+++.-++|.|
T Consensus 16 ~l~dH~eLa~ffrktYgptg~fnakpFeg~RSWAGARPElRaIgyD~~GvaAH~G~LRRFIkVG~vDlLVaElGLygVRp 95 (196)
T PF02474_consen 16 QLADHVELAEFFRKTYGPTGAFNAKPFEGGRSWAGARPELRAIGYDSRGVAAHMGLLRRFIKVGEVDLLVAELGLYGVRP 95 (196)
T ss_pred chhhhHHHHHHHHHhcCCCCcccCccCCcccccccCCceeEEEeecCchHHHHHHHHHHHhccCCcceeEEEEEEEEeec
Confidence 445667777777776643 233222221111 24444455554444332221 1111111356788999999
Q ss_pred CcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcC---c-------EEEeEeecccccccc---ccee
Q psy17026 349 PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFG---F-------EIVETKQHYYKRIEP---ADAY 415 (435)
Q Consensus 349 ~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~G---F-------~~~~~~~~~y~~~~~---~~~~ 415 (435)
+.+|.||+..+ ..+.-.+.+.+ +-..+.+|.. +..+.+++++ . +.-.+..+.|.+-.+ .|..
T Consensus 96 DLEGlGi~hs~-r~m~PvLq~Lg-VPF~FGtVR~---al~~Hv~R~~R~gl~ti~~gvrVRSTlpdv~~dlppTr~ed~l 170 (196)
T PF02474_consen 96 DLEGLGISHSM-RVMYPVLQELG-VPFGFGTVRH---ALRNHVERLCRNGLATILSGVRVRSTLPDVYLDLPPTRIEDVL 170 (196)
T ss_pred cccccccchhh-hhhhhHHHhcC-CCeecccchH---HHHHHHHHHhccchhhcccCceeeccCccccCCCCCcccccce
Confidence 99999999976 57777777777 7666677766 6777777665 3 334455555554222 4666
Q ss_pred eeeecccC
Q psy17026 416 VLQKTLRN 423 (435)
Q Consensus 416 ~m~~~l~~ 423 (435)
.+..-+.+
T Consensus 171 v~V~Pi~r 178 (196)
T PF02474_consen 171 VVVLPIGR 178 (196)
T ss_pred EEEEcCCC
Confidence 66666643
No 246
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=75.12 E-value=57 Score=28.55 Aligned_cols=122 Identities=15% Similarity=0.201 Sum_probs=75.5
Q ss_pred EEcCCchhHHHHHHHhHhhCC-----CCCCHHHHHHHHhc-C--ceEEEEEeCC-EEEEEEEEEecCC----CC-----C
Q psy17026 276 LGDVTPHNIKQLKRLNTVVFP-----VSYNEKFYKDVLEA-G--ELAKLAYYND-IVIGAVCCRIDPN----NG-----R 337 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~~-----~~~~~~~~~~~~~~-~--~~~~v~~~~~-~ivG~~~~~~~~~----~~-----~ 337 (435)
+|++++.|++++.++...-.. ..++.+.+..++.. . -..+|+.+++ +|-.|+++..-+. .. +
T Consensus 31 lR~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~~k~~~l~ 110 (190)
T PF02799_consen 31 LRPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGNPKHKTLK 110 (190)
T ss_dssp EEE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSSSSSSEEE
T ss_pred cccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceeecCCCCcccee
Confidence 799999999999998765432 23566777777652 2 3456777654 8878777654432 11 4
Q ss_pred eEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeeccc
Q psy17026 338 KLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYY 406 (435)
Q Consensus 338 ~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y 406 (435)
.+|+... +... ==-+.|++.++-.|++.| +.....-..-+|. .|.+.+.|.+-.=.-.||
T Consensus 111 aAY~fY~-~~~~----~~l~~Lm~DaLi~Ak~~g-fDVFNaLd~mdN~---~fL~~lKFg~GdG~L~YY 170 (190)
T PF02799_consen 111 AAYSFYY-VATS----TRLKELMNDALILAKNEG-FDVFNALDLMDNS---SFLEDLKFGPGDGNLNYY 170 (190)
T ss_dssp EEEEEEE-EESS----SHHHHHHHHHHHHHHHTT-ESEEEEESTTTGG---GTTTTTT-EEEEEEEEEE
T ss_pred eeeeeee-eecC----CCHHHHHHHHHHHHHHcC-CCEEehhhhccch---hhHhhCCccCCCCCeEEE
Confidence 4555433 2222 235688999999999988 7776655555554 589999999855444553
No 247
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=72.64 E-value=9.2 Score=29.59 Aligned_cols=51 Identities=20% Similarity=0.184 Sum_probs=35.1
Q ss_pred cCceEEEEEeCCE-EEEEEEEEecCCC---------------------CCeEEEEEEEECCCcccCChHHHHH
Q psy17026 310 AGELAKLAYYNDI-VIGAVCCRIDPNN---------------------GRKLYIMTLGCLSPYRRLGIGSMML 360 (435)
Q Consensus 310 ~~~~~~v~~~~~~-ivG~~~~~~~~~~---------------------~~~~~i~~i~V~p~~rgkGlg~~Ll 360 (435)
.....+++.++++ +||.+-+...... ...+++..++|+|+||+......|.
T Consensus 28 ~~~~h~lv~~~~~~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 28 EHSVHLLVRDKNTEVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CCccEEEEEECCCCEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 3444556666555 9998765433221 1678999999999999998776654
No 248
>PHA02769 hypothetical protein; Provisional
Probab=72.57 E-value=3.3 Score=32.34 Aligned_cols=44 Identities=25% Similarity=0.502 Sum_probs=29.2
Q ss_pred HHHHHH---HHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEe
Q psy17026 356 GSMMLE---HILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETK 402 (435)
Q Consensus 356 g~~Ll~---~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~ 402 (435)
|..|++ .+.+.++..| .+.++.--.++ .+.++|.|+||+.+|..
T Consensus 94 gd~lvnfl~~l~~k~~~dg-~evlwtlgfpd--hsnaly~kagfk~vg~t 140 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKDG-FEVLWTLGFPD--HSNALYKKAGFKLVGQT 140 (154)
T ss_pred hHHHHHHHHHHHHHHhcCC-eEEEEEecCCC--cchhHHhhhhhhHhccc
Confidence 444444 4455566667 66655444444 58889999999999863
No 249
>PRK04531 acetylglutamate kinase; Provisional
Probab=70.65 E-value=26 Score=34.74 Aligned_cols=96 Identities=15% Similarity=0.179 Sum_probs=64.6
Q ss_pred EeeCCcccHHHHHHHhHhcCCccccHHHHHHHHhcCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCH
Q psy17026 106 LGDVTPHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGI 185 (435)
Q Consensus 106 ir~~~~~d~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gi 185 (435)
...+.+=|++.+.++....|.....+.++. .. ..+-++.++..=|.+.+.... ...++..++|.+..||.|+
T Consensus 256 ~~~~~~~d~~~l~~ll~~sf~r~~~~~y~~----~~-~~~~~y~~~~y~~~Aiv~~~~---~~~~Ldkf~v~~~~~~~~v 327 (398)
T PRK04531 256 ATDWDELDLERLNLLIESSFGRTLKPDYFD----TT-QLLRAYVSENYRAAAILTETG---GGPYLDKFAVLDDARGEGL 327 (398)
T ss_pred eCChhhcCHHHHHHHHhhhcccchHHHHhc----cC-CceEEEEeCCCcEEEEEecCC---CceEeEEEEEccchhhcCh
Confidence 334455588888888877776555444433 22 334444455544544444432 3579999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCccEEEEEEEcCCH
Q psy17026 186 GSMMLEHILNYVEKDGNFDSIYLHVQLNND 215 (435)
Q Consensus 186 G~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~ 215 (435)
+..+.+++.+. +..+.+.+..+|+
T Consensus 328 ~d~vf~~~~~~------~~~L~Wrsr~~n~ 351 (398)
T PRK04531 328 GRAVWNVMREE------TPQLFWRSRHNNT 351 (398)
T ss_pred HHHHHHHHHhh------CCceEEEcCCCCC
Confidence 99999988754 3467788888885
No 250
>KOG2747|consensus
Probab=70.49 E-value=6.5 Score=38.19 Aligned_cols=33 Identities=21% Similarity=0.567 Sum_probs=27.1
Q ss_pred EEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcC
Q psy17026 169 LYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 201 (435)
Q Consensus 169 ~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g 201 (435)
.-+.-+.|.|.||++|+|+.|++.--...+..|
T Consensus 261 yNlaCILtLPpyQRkGYGklLIdFSYeLSr~E~ 293 (396)
T KOG2747|consen 261 YNLACILTLPPYQRKGYGKLLIDFSYELSRREG 293 (396)
T ss_pred cceeeeeecChhhhcccchhhhhhhhhhhcccC
Confidence 346778899999999999999998777666555
No 251
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=68.29 E-value=10 Score=32.19 Aligned_cols=111 Identities=13% Similarity=0.107 Sum_probs=68.4
Q ss_pred CcccHHHHHHHhHhcCCc--cccHHHHHHHHh----cCCeEEEEEECCeEEEEEEE-----EeecCCCCeEEEEEEEeCC
Q psy17026 110 TPHNIKQLKRLNTVVFPV--SYNEKFYKDVLE----AGELAKLAYYNDIVIGAVCC-----RIDPNNGRKLYIMTLGCLS 178 (435)
Q Consensus 110 ~~~d~~~l~~l~~~~~~~--~~~~~~~~~~l~----~~~~~~v~~~~g~iVG~~~~-----~~~~~~~~~~~i~~l~V~p 178 (435)
..+|-.++.++....+.. .++.+-|+..-+ .++...++++..-+++-+++ .....+.-.+.++-.+|.|
T Consensus 16 ~l~dH~eLa~ffrktYgptg~fnakpFeg~RSWAGARPElRaIgyD~~GvaAH~G~LRRFIkVG~vDlLVaElGLygVRp 95 (196)
T PF02474_consen 16 QLADHVELAEFFRKTYGPTGAFNAKPFEGGRSWAGARPELRAIGYDSRGVAAHMGLLRRFIKVGEVDLLVAELGLYGVRP 95 (196)
T ss_pred chhhhHHHHHHHHHhcCCCCcccCccCCcccccccCCceeEEEeecCchHHHHHHHHHHHhccCCcceeEEEEEEEEeec
Confidence 356667777777776642 233222221111 23344455554433322211 1111111356788999999
Q ss_pred CccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCC
Q psy17026 179 PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFG 225 (435)
Q Consensus 179 ~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~G 225 (435)
+.+|.||+..+ ..+.-.+++.| +...+..|.. +..+.+++++
T Consensus 96 DLEGlGi~hs~-r~m~PvLq~Lg-VPF~FGtVR~---al~~Hv~R~~ 137 (196)
T PF02474_consen 96 DLEGLGISHSM-RVMYPVLQELG-VPFGFGTVRH---ALRNHVERLC 137 (196)
T ss_pred cccccccchhh-hhhhhHHHhcC-CCeecccchH---HHHHHHHHHh
Confidence 99999999976 68888888888 8888888877 7778888776
No 252
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=67.17 E-value=43 Score=32.79 Aligned_cols=113 Identities=18% Similarity=0.254 Sum_probs=70.5
Q ss_pred eCCcccHHHHHHHhHhcCCccc-----cHHHHHHHHh---cCCeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCC
Q psy17026 108 DVTPHNIKQLKRLNTVVFPVSY-----NEKFYKDVLE---AGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSP 179 (435)
Q Consensus 108 ~~~~~d~~~l~~l~~~~~~~~~-----~~~~~~~~l~---~~~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~ 179 (435)
.+++++++.+..+....+...| +.++|..... +.-..+++..+|++||++.+....+. .+-.......+
T Consensus 209 ~i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~~FF~~l~~~m~~~~~l~~A~~~g~~Va~aL~l~~~~~---LyGRYwG~~~~ 285 (370)
T PF04339_consen 209 EITDEDWDRFYRLYQNTYAKRWGRPYLTREFFEQLAETMPEQVVLVVARRDGQPVAFALCLRGDDT---LYGRYWGCDEE 285 (370)
T ss_pred CCCHHHHHHHHHHHHHHHHhhCCChhhcHHHHHHHHHhCcCCEEEEEEEECCeEEEEEEEEEeCCE---EEEeeeccccc
Confidence 4566777888888666553322 5566666554 23346678889999999988887653 33333344455
Q ss_pred ccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 180 YRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 180 ~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
+.+.-. ....-..+++|.++| ++++...... .-=...||.++.+
T Consensus 286 ~~~LHF-e~cYYq~Ie~aI~~G-l~~f~~GaqG------EHK~~RGf~P~~t 329 (370)
T PF04339_consen 286 IPFLHF-ELCYYQGIEYAIEHG-LRRFEPGAQG------EHKIARGFEPVPT 329 (370)
T ss_pred ccCcch-HHHHHHHHHHHHHcC-CCEEECCcch------hHHHHcCCccccc
Confidence 444332 223556799999999 8877666432 1223679987654
No 253
>PRK04531 acetylglutamate kinase; Provisional
Probab=66.57 E-value=30 Score=34.24 Aligned_cols=106 Identities=16% Similarity=0.201 Sum_probs=67.1
Q ss_pred CchhHHHHHHHhHhhCCCCCCHHHHHHHHhcCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHH
Q psy17026 280 TPHNIKQLKRLNTVVFPVSYNEKFYKDVLEAGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMM 359 (435)
Q Consensus 280 ~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~L 359 (435)
..-|.+.+..+....|.......++. .. ..+-++.++..-|.+.+.... ...++..++|.+..||.|++..+
T Consensus 260 ~~~d~~~l~~ll~~sf~r~~~~~y~~----~~-~~~~~y~~~~y~~~Aiv~~~~---~~~~Ldkf~v~~~~~~~~v~d~v 331 (398)
T PRK04531 260 DELDLERLNLLIESSFGRTLKPDYFD----TT-QLLRAYVSENYRAAAILTETG---GGPYLDKFAVLDDARGEGLGRAV 331 (398)
T ss_pred hhcCHHHHHHHHhhhcccchHHHHhc----cC-CceEEEEeCCCcEEEEEecCC---CceEeEEEEEccchhhcChHHHH
Confidence 33477888888777766554444443 22 334444455555555554433 45799999999999999999999
Q ss_pred HHHHHHHHHHcCCccEEEEEEEcCCHHHHHHH-H-hcCcEEEe
Q psy17026 360 LEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY-K-KFGFEIVE 400 (435)
Q Consensus 360 l~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y-~-k~GF~~~~ 400 (435)
.+.+.+.. ..+...+..+|+ ..++| + +-|+...+
T Consensus 332 f~~~~~~~------~~L~Wrsr~~n~-~~~Wyf~~s~G~~~~~ 367 (398)
T PRK04531 332 WNVMREET------PQLFWRSRHNNT-INKFYYAESDGCIKQE 367 (398)
T ss_pred HHHHHhhC------CceEEEcCCCCC-ccceeeecccceEecC
Confidence 99877654 235556666665 44444 4 44766643
No 254
>PHA00771 head assembly protein
Probab=65.01 E-value=72 Score=25.68 Aligned_cols=63 Identities=13% Similarity=0.129 Sum_probs=46.5
Q ss_pred EEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeeccccc
Q psy17026 344 LGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKR 408 (435)
Q Consensus 344 i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~y~~ 408 (435)
-.-+|++||+ ++ +.-....+|+.++-.+..+...+...-.-.+-..+=.|-+.+|+..++|+.
T Consensus 67 a~y~P~fRG~-ya-~~~r~F~kwlL~Nt~f~~vit~vp~kt~~G~vic~lig~rRVG~id~a~~g 129 (151)
T PHA00771 67 AMYLPEIRGF-SK-EIGLAFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLKRVGTIKKYFKG 129 (151)
T ss_pred eeeCccccch-hH-HHHHHHHHHHhcCCceeEEEEecccccccchhhhhhhCCceeeeHHHHhcC
Confidence 3458999987 33 666777788877765666666666555556666777899999999999964
No 255
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=63.02 E-value=56 Score=25.73 Aligned_cols=62 Identities=15% Similarity=0.207 Sum_probs=43.3
Q ss_pred EECCeEEEEEEEEeecC----CCCeEEEEEEEeCCCccC-CCHHHHHHHHHHHHHHhcCCccE-EEEEEEcCCH
Q psy17026 148 YYNDIVIGAVCCRIDPN----NGRKLYIMTLGCLSPYRR-LGIGSMMLEHILNYVEKDGNFDS-IYLHVQLNND 215 (435)
Q Consensus 148 ~~~g~iVG~~~~~~~~~----~~~~~~i~~l~V~p~~rg-~GiG~~Ll~~~~~~a~~~g~~~~-v~l~v~~~N~ 215 (435)
+.+|..=|.+.+..... ....+++..++|.+..|| .|++..+.+++.+. ..+ +...+..+|+
T Consensus 15 y~~~~y~~~AIvt~e~~~~~~~~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~------fp~~L~Wrsr~~n~ 82 (108)
T cd04266 15 IIAGDYEGAAILTWEGPDGSTPEKIAYLDKFAVLPKAQGSDGIADILFNAMLDG------FPNELIWRSRKDNP 82 (108)
T ss_pred EEeCCCcEEEEEecCCCCccCCCCceEEEEEEEccccccccchHHHHHHHHHHc------CCCceEEEeCCCCc
Confidence 33444444444444322 135689999999999997 89999999988762 343 7788888874
No 256
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=61.56 E-value=5.3 Score=37.82 Aligned_cols=45 Identities=16% Similarity=0.367 Sum_probs=30.3
Q ss_pred eEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHH
Q psy17026 152 IVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVE 198 (435)
Q Consensus 152 ~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~ 198 (435)
.+|||.+=...... ..-+.-+.+.|.||++|+|+.|++.--...+
T Consensus 248 h~vGyFSKEK~S~~--~yNLaCILtLP~yQRrGYG~lLIdFSY~Ls~ 292 (395)
T COG5027 248 HLVGYFSKEKESEQ--DYNLACILTLPPYQRRGYGKLLIDFSYLLSQ 292 (395)
T ss_pred eeeeeechhhcccc--cCceEEEEecChhHhcccceEeeeeeeeccc
Confidence 37887654333322 2347778899999999999998876543333
No 257
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=61.21 E-value=26 Score=34.84 Aligned_cols=121 Identities=17% Similarity=0.103 Sum_probs=62.0
Q ss_pred CCHHHHHHHHh---cCceEEEEEeC-CEEEEEEEEEecCCCCCeEEEEEEEECC--CcccCChHHHHHHHHHHHHHHcCC
Q psy17026 299 YNEKFYKDVLE---AGELAKLAYYN-DIVIGAVCCRIDPNNGRKLYIMTLGCLS--PYRRLGIGSMMLEHILNYVEKDGN 372 (435)
Q Consensus 299 ~~~~~~~~~~~---~~~~~~v~~~~-~~ivG~~~~~~~~~~~~~~~i~~i~V~p--~~rgkGlg~~Ll~~~~~~~~~~g~ 372 (435)
.+...+..... .....+.+..+ +.++|.+.+........ ..+..+-=-| +|....+-..++..+.+++++++
T Consensus 19 lQs~~wa~vk~~~gw~~~~vgv~~d~~~v~aa~ll~~~~~~~g-~~~~yiprGPv~d~~d~ell~~f~~~Lk~~akk~~- 96 (406)
T PF02388_consen 19 LQSSEWAEVKEKRGWEVERVGVKDDGGEVAAAALLLRKKPFKG-FKYAYIPRGPVMDYSDEELLEFFLEELKKYAKKKR- 96 (406)
T ss_dssp CCSHHHHHHCHHTTSEEEEEEEE-TTS-EEEEEEEEEEECTTT-CEEEEETT--EC-TT-HHHHHHHHHHHHHHHCTTT-
T ss_pred chHHHHHHHHHHCCCeEEEEEEEeCCCeEEEEEEEEEeccCCc-eeEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC-
Confidence 34445555542 22233444444 67776654433322211 1122222234 78888889999999999998877
Q ss_pred ccEEEEEE---------------EcCCHHHHHHHHhcCcEEEeEeecccccccccceeeeeecccC
Q psy17026 373 FDSIYLHV---------------QLNNDVAIDFYKKFGFEIVETKQHYYKRIEPADAYVLQKTLRN 423 (435)
Q Consensus 373 ~~~i~l~v---------------~~~N~~a~~~y~k~GF~~~~~~~~~y~~~~~~~~~~m~~~l~~ 423 (435)
+-.+.++. ...|...+..++++||...+....|-....+. +.|.+.|..
T Consensus 97 a~~lridP~~~~~~~~~~g~~~~~~~~~~~~~~l~~~G~~~~g~~~~~~~~~qpr--~~~v~dL~~ 160 (406)
T PF02388_consen 97 ALFLRIDPNVIYQERDEDGEPIEGEENDELIENLKALGFRHQGFTKGYDDTIQPR--WTYVKDLTG 160 (406)
T ss_dssp EEEEEE--S-EEECE-TTS-EEEE-S-THHHHHHHHTT-CCTS-SSSTTSSSS-S--EEEEEEGCC
T ss_pred EEEEEEeCchhhhhcccccccccCcchHHHHHHHHhcCceecCcccCCCcccCcc--EEEEEECCC
Confidence 55554432 23466788999999999988766552212233 344555543
No 258
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=61.16 E-value=27 Score=26.08 Aligned_cols=27 Identities=22% Similarity=0.372 Sum_probs=24.2
Q ss_pred ccEEEEEEEcCCHHHHHHHHhCCCEEE
Q psy17026 203 FDSIYLHVQLNNDVAIDFYKKFGFEIV 229 (435)
Q Consensus 203 ~~~v~l~v~~~N~~a~~~y~k~GF~~~ 229 (435)
+..++=.|...|..+++|.+.+|++..
T Consensus 56 Y~~l~N~V~~~N~~HIRfLk~lGA~f~ 82 (86)
T PF11090_consen 56 YPVLWNFVWVGNKSHIRFLKSLGAVFH 82 (86)
T ss_pred hhheeEEEEeCCHHHHHHHHhcCcEEc
Confidence 467889999999999999999999854
No 259
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=60.23 E-value=5 Score=37.98 Aligned_cols=54 Identities=15% Similarity=0.247 Sum_probs=35.4
Q ss_pred cCceEEEEEeCC----EEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHH
Q psy17026 310 AGELAKLAYYND----IVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILN 365 (435)
Q Consensus 310 ~~~~~~v~~~~~----~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~ 365 (435)
++..++++...| .+|||..=..... ...-+..|-+.|-||++|+|+.|++..=.
T Consensus 232 DpflFYvl~~~~~~~~h~vGyFSKEK~S~--~~yNLaCILtLP~yQRrGYG~lLIdFSY~ 289 (395)
T COG5027 232 DPFLFYVLTERGDTGCHLVGYFSKEKESE--QDYNLACILTLPPYQRRGYGKLLIDFSYL 289 (395)
T ss_pred cceEEEEEEEcCCcceeeeeeechhhccc--ccCceEEEEecChhHhcccceEeeeeeee
Confidence 355666766643 3678743322222 22458889999999999999988875433
No 260
>PHA02769 hypothetical protein; Provisional
Probab=58.96 E-value=8.7 Score=30.04 Aligned_cols=39 Identities=26% Similarity=0.478 Sum_probs=27.2
Q ss_pred HHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEe
Q psy17026 191 EHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETK 232 (435)
Q Consensus 191 ~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~ 232 (435)
..+.+..+..| ...++..-.++ -+.++|.|.||+..|..
T Consensus 102 ~~l~~k~~~dg-~evlwtlgfpd--hsnaly~kagfk~vg~t 140 (154)
T PHA02769 102 NDLAEKLKKDG-FEVLWTLGFPD--HSNALYKKAGFKLVGQT 140 (154)
T ss_pred HHHHHHHhcCC-eEEEEEecCCC--cchhHHhhhhhhHhccc
Confidence 34455666677 66666555554 46899999999998853
No 261
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=57.80 E-value=50 Score=30.03 Aligned_cols=60 Identities=8% Similarity=0.148 Sum_probs=49.1
Q ss_pred CCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcC
Q psy17026 150 NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLN 213 (435)
Q Consensus 150 ~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~ 213 (435)
.|++|+.+....-.+.. ..--.+-+|++...++|+-.+-.=+.+|++.| ..-++|.-...
T Consensus 159 ~G~LvAVavtDvL~dGl---SsVY~FydPd~s~~SLGt~~iL~~I~~aq~~~-l~yvYLGYwI~ 218 (253)
T COG2935 159 EGKLVAVAVTDVLPDGL---SSVYTFYDPDMSKRSLGTLSILDQIAIAQRLG-LPYVYLGYWIK 218 (253)
T ss_pred CCcEEEEEeeecccCcc---eeEEEEeCCChhhhcchHHHHHHHHHHHHHhC-CCeEEEEEEEC
Confidence 79999998888777643 33445679999999999988888899999999 99999876543
No 262
>COG2348 Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]
Probab=57.20 E-value=1.3e+02 Score=29.93 Aligned_cols=92 Identities=10% Similarity=-0.033 Sum_probs=61.1
Q ss_pred CeEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEe-CC--CccCCCHHHHHHHHHHHHHHhcCCccEEEE----------
Q psy17026 142 ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGC-LS--PYRRLGIGSMMLEHILNYVEKDGNFDSIYL---------- 208 (435)
Q Consensus 142 ~~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V-~p--~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l---------- 208 (435)
...+.+..+++.|+.+++....... .....+.- .| +|-++.+-..+++.+..+++... +-.+.+
T Consensus 40 ~~~~~v~~~~~~v~aa~ll~k~~~~--~~~~~~~prGPv~dy~~~~l~~~~~k~l~~y~k~~~-~l~i~idP~l~~~~~~ 116 (418)
T COG2348 40 AHLIGVKKDGNAVIAASLLSKKLPL--GFYTYYIPRGPVMDYSNQELLDYFIKELKKYAKSKR-ALFIKIDPYLVYQQFD 116 (418)
T ss_pred ceeEEEEecCceeeeeeeeeeeccC--CceEEEecCCCcccccchHHHHHHHHHHHHHHhhcc-ceEEEeccchhhhccc
Confidence 3456777788877776665554332 12222222 44 88888888888888888888765 444433
Q ss_pred -----EEEcCCHHHHHHHHhCCCEEEEEeeccc
Q psy17026 209 -----HVQLNNDVAIDFYKKFGFEIVETKQHYY 236 (435)
Q Consensus 209 -----~v~~~N~~a~~~y~k~GF~~~~~~~~~~ 236 (435)
.....|.+.++.+.++|++..|....+-
T Consensus 117 ~~~~~~~~~~n~~~i~~l~~lG~k~~g~t~~~~ 149 (418)
T COG2348 117 LGGEIIENYNNLAIIKLLKDLGYKHSGFTKGLD 149 (418)
T ss_pred CCCccccCcchHHHHHHHHHhhhhhcCcccccC
Confidence 1125678899999999999998766653
No 263
>PRK00756 acyltransferase NodA; Provisional
Probab=56.17 E-value=87 Score=26.63 Aligned_cols=81 Identities=14% Similarity=0.177 Sum_probs=50.8
Q ss_pred CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhc----------CcEEEeEeeccc
Q psy17026 337 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKF----------GFEIVETKQHYY 406 (435)
Q Consensus 337 ~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~----------GF~~~~~~~~~y 406 (435)
-.+++.-++|.|+..|.||+..+ ..+.-.+.+.+ +-..+-+|.. +..+-.+++ |-++-.+..+.|
T Consensus 84 LVaElGLygVRpDLEGlGi~~S~-r~m~PvLq~Lg-VPF~FGtVR~---al~~Hv~R~~r~g~~ti~~gvrVRSTl~~v~ 158 (196)
T PRK00756 84 LVAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELG-VPFAFGTVRH---ALRNHVERLCRNGLATIVTGVRVRSTLPDVY 158 (196)
T ss_pred eEEEeeeeeeccccccccchhhH-HHHHHHHHhcC-CCeecccchH---HHHHHHHHHhccCcceecccceeeccCcccc
Confidence 45678889999999999998866 56666777766 5555555544 455544443 334445566665
Q ss_pred cccc---ccceeeeeeccc
Q psy17026 407 KRIE---PADAYVLQKTLR 422 (435)
Q Consensus 407 ~~~~---~~~~~~m~~~l~ 422 (435)
.+-. -.|...+..-+.
T Consensus 159 ~dlpptr~ed~lv~V~Pi~ 177 (196)
T PRK00756 159 LDLPPTRTEDVLVVVFPIG 177 (196)
T ss_pred CCCCCccccccEEEEEeCC
Confidence 5322 255555555544
No 264
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=56.00 E-value=50 Score=33.87 Aligned_cols=64 Identities=6% Similarity=0.069 Sum_probs=47.5
Q ss_pred EEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEE
Q psy17026 144 AKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHV 210 (435)
Q Consensus 144 ~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v 210 (435)
..++..+|+||||+.+....... ...+.-+--+|+.- +|+...|...++.+++++| ++++.+..
T Consensus 395 va~~~~~g~VvaFa~l~~~~~~~-~~SlDlMR~sp~ap-~g~mdfLf~~li~~aKe~G-~~~fsLgm 458 (538)
T COG2898 395 VAAVDNEGEVVAFANLMPTGGKE-GYSLDLMRRSPDAP-NGTMDFLFSELILWAKEEG-YQRFSLGM 458 (538)
T ss_pred eeEEcCCCCeEEEEeecccCCcc-eeEEEeeecCCCCC-chHHHHHHHHHHHHHHHcC-CeEEecCC
Confidence 33455588899999998866532 34454444555543 7999999999999999999 88888754
No 265
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=53.70 E-value=1.1e+02 Score=34.87 Aligned_cols=59 Identities=14% Similarity=0.081 Sum_probs=45.5
Q ss_pred CCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEc
Q psy17026 150 NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQL 212 (435)
Q Consensus 150 ~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~ 212 (435)
+|+++||+.+...... ...+.-+--+|+. -.|+.-.|+.+++.++++.| +..+.|....
T Consensus 429 ~G~i~af~s~~p~~~~--g~slDLMRr~pda-pnGvmE~L~~~l~~~~k~~G-~~~~sLg~AP 487 (1094)
T PRK02983 429 DGQVVALLSFVPWGRR--GLSLDLMRRSPDA-PNGVIELMVAELALEAESLG-ITRISLNFAV 487 (1094)
T ss_pred CCeEEEEEEEeeeCCC--CEEEEecccCCCC-CCCHHHHHHHHHHHHHHHcC-CCEEEechhh
Confidence 7999999999986532 2444434344554 68999999999999999999 9999886543
No 266
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=53.55 E-value=63 Score=25.44 Aligned_cols=75 Identities=13% Similarity=0.189 Sum_probs=46.5
Q ss_pred EeCCEEEEEEEEEecCC----CCCeEEEEEEEECCCccc-CChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHH-
Q psy17026 318 YYNDIVIGAVCCRIDPN----NGRKLYIMTLGCLSPYRR-LGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY- 391 (435)
Q Consensus 318 ~~~~~ivG~~~~~~~~~----~~~~~~i~~i~V~p~~rg-kGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y- 391 (435)
+.++..-|.+++..... .....++..++|.+..|| .|++..+.+.+.+.. -+.+.-.+..+|. ..++|
T Consensus 15 y~~~~y~~~AIvt~e~~~~~~~~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~f-----p~~L~Wrsr~~n~-~n~Wyf 88 (108)
T cd04266 15 IIAGDYEGAAILTWEGPDGSTPEKIAYLDKFAVLPKAQGSDGIADILFNAMLDGF-----PNELIWRSRKDNP-VNKWYF 88 (108)
T ss_pred EEeCCCcEEEEEecCCCCccCCCCceEEEEEEEccccccccchHHHHHHHHHHcC-----CCceEEEeCCCCc-ccceEE
Confidence 33444444444543321 135689999999999997 899999999887721 1225556666664 44555
Q ss_pred H-hcCcEE
Q psy17026 392 K-KFGFEI 398 (435)
Q Consensus 392 ~-k~GF~~ 398 (435)
+ +-|+-.
T Consensus 89 ers~Gs~~ 96 (108)
T cd04266 89 ERSVGVLK 96 (108)
T ss_pred eeeeEEEE
Confidence 2 335544
No 267
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=50.32 E-value=1.1e+02 Score=28.84 Aligned_cols=96 Identities=10% Similarity=0.120 Sum_probs=62.9
Q ss_pred EEcCCchhHHHHHHHhHhhCCC--------CCCHHHHHHHHhcC----ceEEEEEe--CCEEEEEEEEEe-----cCCCC
Q psy17026 276 LGDVTPHNIKQLKRLNTVVFPV--------SYNEKFYKDVLEAG----ELAKLAYY--NDIVIGAVCCRI-----DPNNG 336 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~----~~~~v~~~--~~~ivG~~~~~~-----~~~~~ 336 (435)
|.-.+...++++..+....+.+ .+..++++-.+..+ ..+..+.. ..++|||+...+ .+...
T Consensus 84 idv~N~~ql~dv~~lL~eNYVED~~ag~rf~Y~~EFl~Wal~~pg~kK~whigvRvk~t~klVaFIsa~p~~v~vRgK~~ 163 (451)
T COG5092 84 IDVANKKQLEDVFVLLEENYVEDIYAGHRFRYSVEFLQWALDGPGGKKRWHIGVRVKGTQKLVAFISAKPHLVSVRGKRS 163 (451)
T ss_pred EeccccchhHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHhhcCCCCceeeEEEEEEcccceeEEEEecceeEEEEccccc
Confidence 4444556677777666555432 23345555444422 23344433 458999987543 23333
Q ss_pred CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcC
Q psy17026 337 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 371 (435)
Q Consensus 337 ~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g 371 (435)
...++--++|+.+.|++-+.--|+..+-+++-..+
T Consensus 164 ~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~ 198 (451)
T COG5092 164 SVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDG 198 (451)
T ss_pred ccceEEEEEEehhhhhCccchHHHHHHHHhhhhhh
Confidence 56788889999999999999999999999887666
No 268
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=46.52 E-value=1.1e+02 Score=26.62 Aligned_cols=75 Identities=11% Similarity=0.248 Sum_probs=57.2
Q ss_pred EECCeEEEEEEEEeecCCC--------------------------CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcC
Q psy17026 148 YYNDIVIGAVCCRIDPNNG--------------------------RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 201 (435)
Q Consensus 148 ~~~g~iVG~~~~~~~~~~~--------------------------~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g 201 (435)
..+|++++.+++....... ..++++.++.. +.|.++.|+..+...+...|
T Consensus 41 ~~~g~l~aa~G~r~A~~~~LFlEqYLd~piE~~l~~~~g~~v~R~~IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g 116 (179)
T PF12261_consen 41 DSDGELVAAAGLRFASQEPLFLEQYLDQPIEQLLSRRFGRPVSRSQIVEVGNLASF----SPGAARLLFAALAQLLAQQG 116 (179)
T ss_pred cCCCCEEEEEeecccCCCCcchhhhcCCcHHHHHHhhcCCCcchhheeEeechhhc----CcccHHHHHHHHHHHHHHCC
Confidence 4578899888887766321 34667777653 68999999999999999999
Q ss_pred CccEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 202 NFDSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 202 ~~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
+. ..+........+++.++|.....
T Consensus 117 -~~---w~vfTaT~~lr~~~~rlgl~~~~ 141 (179)
T PF12261_consen 117 -FE---WVVFTATRQLRNLFRRLGLPPTV 141 (179)
T ss_pred -CC---EEEEeCCHHHHHHHHHcCCCcee
Confidence 44 44444556899999999998654
No 269
>PRK00756 acyltransferase NodA; Provisional
Probab=45.96 E-value=1.2e+02 Score=25.81 Aligned_cols=53 Identities=11% Similarity=0.126 Sum_probs=41.4
Q ss_pred CeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhC
Q psy17026 167 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKF 224 (435)
Q Consensus 167 ~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~ 224 (435)
-.+.++-..|.|+..|.||+..+ ..+.-.+++.| +..-+-.|.. +..+-.+++
T Consensus 84 LVaElGLygVRpDLEGlGi~~S~-r~m~PvLq~Lg-VPF~FGtVR~---al~~Hv~R~ 136 (196)
T PRK00756 84 LVAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELG-VPFAFGTVRH---ALRNHVERL 136 (196)
T ss_pred eEEEeeeeeeccccccccchhhH-HHHHHHHHhcC-CCeecccchH---HHHHHHHHH
Confidence 45678889999999999998866 67888888888 8888877766 555555554
No 270
>COG3146 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.57 E-value=30 Score=32.87 Aligned_cols=208 Identities=14% Similarity=0.101 Sum_probs=115.9
Q ss_pred EEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEEEeeccccc-CC-CCceEE--E-
Q psy17026 173 TLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHYYKR-IE-PADAYV--L- 247 (435)
Q Consensus 173 ~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~-~~-~~d~~~--m- 247 (435)
.+.+++..-..-+...|+..+...+.+.| ++..-+.. ..+.-....++.||-..--....+.| |- ..|.+. +
T Consensus 120 RlL~~~~~d~~~~~~~L~~~l~~~~~~~g-lSS~Hv~F--~~~~~~~~l~~~Gfl~r~d~qfhw~N~Gf~~fDdfL~~l~ 196 (387)
T COG3146 120 RLLARDGEDEEEVRQALLAGLDELCEQSG-LSSAHVTF--VDEDEQPALEKAGFLHRLDQQFHWCNSGFQDFDDFLAALS 196 (387)
T ss_pred eeecCccccHHHHHHHHHHHHHHHHHhcC-CCceeEec--CCHHHHHHHHhccchhhcCceEEEecCCcccHHHHHHHHH
Confidence 34455544444566788888888888888 66654443 33467889999999743322222221 11 011111 0
Q ss_pred ---EeeccccCCCCCCCCCCccccCCCCcEEEE-----cCCchhHHHHHHHhHhhCCCCCCHH-----HHH---HHHhcC
Q psy17026 248 ---QKTLRNKVPNGEEHKDGNVFTMTRPKIELG-----DVTPHNIKQLKRLNTVVFPVSYNEK-----FYK---DVLEAG 311 (435)
Q Consensus 248 ---~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir-----~~~~~d~~~~~~l~~~~~~~~~~~~-----~~~---~~~~~~ 311 (435)
+|.+... . ......+++|. .+++..++.+..++......-|... ++. +.+.+.
T Consensus 197 s~kRK~irrE------R-----r~v~~~Gi~i~~l~G~~lte~~wd~f~~fY~dT~~~~wg~pYLtr~Ff~~lge~m~~~ 265 (387)
T COG3146 197 SRKRKNIRRE------R-----RAVHKEGIEIQWLTGDDLTEAIWDAFFAFYMDTGSRKWGRPYLTRPFFSLLGERMADD 265 (387)
T ss_pred HhHHHHHHHH------H-----HHHHhcCcEEEEeeCCcCCHHHHHHHHHHHHhhcccccCCchhhHHHHHHHHHhhhhh
Confidence 1111110 0 01123345555 4466778888888877766656543 332 223345
Q ss_pred ceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHH
Q psy17026 312 ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY 391 (435)
Q Consensus 312 ~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y 391 (435)
-..+++..+|++||.+.+....+.----+..+|.=+|- . --....-..++++..+| +.++.......++
T Consensus 266 vllv~A~r~g~~iaga~~lig~d~LYGR~WG~ied~p~---L-HFE~CYyQ~Id~aI~~g-l~~feaGAqGeHK------ 334 (387)
T COG3146 266 VLLVMAKRGGRPIAGAFNLIGGDTLYGRYWGCIEDHPF---L-HFEVCYYQAIDFAIAEG-LQRFEAGAQGEHK------ 334 (387)
T ss_pred EEEEEeccCCccceEEEEeecCceeccccccccccCCc---c-hhHHHHhhHHHHHHHhC-CceecCCCCcchh------
Confidence 55667788999999887766654321112233322231 1 12345567889999999 8887666655543
Q ss_pred HhcCcEEEeEeecc
Q psy17026 392 KKFGFEIVETKQHY 405 (435)
Q Consensus 392 ~k~GF~~~~~~~~~ 405 (435)
...||.++.+..-.
T Consensus 335 laRGf~pv~~~SaH 348 (387)
T COG3146 335 LARGFPPVATYSAH 348 (387)
T ss_pred hhcCCCcccchhhH
Confidence 35699988874443
No 271
>KOG3014|consensus
Probab=45.50 E-value=1.1e+02 Score=27.91 Aligned_cols=56 Identities=18% Similarity=0.033 Sum_probs=36.0
Q ss_pred eEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHh
Q psy17026 168 KLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKK 223 (435)
Q Consensus 168 ~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k 223 (435)
.+.|..+.|.+..|++||++.|++.+...-....-+.+..+....-.+...+|-.+
T Consensus 183 ~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~~g~~isr~~iAfs~PTddGk~lAt~ 238 (257)
T KOG3014|consen 183 ICGISRIWVSSLRRRKGIASLLLDVARCNFVYGEVISREEIAFSDPTDDGKKLATK 238 (257)
T ss_pred EeeeEEEEeehhhhhhhhHHHHHHHHHHhhhhhcccchhheEecCCCchhHHHHHH
Confidence 46688999999999999999999988655432211333333332222355666554
No 272
>PF12162 STAT1_TAZ2bind: STAT1 TAZ2 binding domain; InterPro: IPR022752 This entry represents the C-terminal domain of STAT1, which selectively binds the TAZ2 domain of CRB (CREB-binding protein) []. This group of eukaryotic proteins is approximately 20 amino acids in length, and is found in association with PF02865 from PFAM, PF00017 from PFAM, PF01017 from PFAM, PF02864 from PFAM. By binding to CRB, it becomes a transcriptional activator and can initiate transcription of certain genes. ; GO: 0003700 sequence-specific DNA binding transcription factor activity; PDB: 2KA6_B.
Probab=44.21 E-value=5.7 Score=21.43 Aligned_cols=15 Identities=20% Similarity=0.581 Sum_probs=9.6
Q ss_pred ecCCCccchhhhccc
Q psy17026 8 LGDVTPHNIKQLKRL 22 (435)
Q Consensus 8 ~~~~~~~~~~~~~~~ 22 (435)
+-||+|+|+..|.++
T Consensus 7 mmPMSPddy~~l~~~ 21 (23)
T PF12162_consen 7 MMPMSPDDYDELERM 21 (23)
T ss_dssp ---S-HHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHh
Confidence 568999999998765
No 273
>KOG3014|consensus
Probab=43.23 E-value=1.3e+02 Score=27.43 Aligned_cols=48 Identities=17% Similarity=0.015 Sum_probs=34.1
Q ss_pred CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEE-EEEEcCC
Q psy17026 337 RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIY-LHVQLNN 384 (435)
Q Consensus 337 ~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~-l~v~~~N 384 (435)
..+.|..|.|.+.-|++|+++.|+..+........-+.+.. +++.+.+
T Consensus 182 ~~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~~g~~isr~~iAfs~PTd 230 (257)
T KOG3014|consen 182 AICGISRIWVSSLRRRKGIASLLLDVARCNFVYGEVISREEIAFSDPTD 230 (257)
T ss_pred cEeeeEEEEeehhhhhhhhHHHHHHHHHHhhhhhcccchhheEecCCCc
Confidence 46779999999999999999999998876654422133333 3455554
No 274
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=42.99 E-value=75 Score=23.80 Aligned_cols=43 Identities=16% Similarity=0.308 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEe
Q psy17026 355 IGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 400 (435)
Q Consensus 355 lg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~ 400 (435)
..+.+..++....+. +..+.=.|..+|...++|.+++|++...
T Consensus 41 F~k~i~~~~d~~l~~---Y~~l~N~V~~~N~~HIRfLk~lGA~f~~ 83 (86)
T PF11090_consen 41 FRKLIKEYLDKMLKQ---YPVLWNFVWVGNKSHIRFLKSLGAVFHN 83 (86)
T ss_pred HHHHHHHHHHHHHHH---hhheeEEEEeCCHHHHHHHHhcCcEEcc
Confidence 333344333333343 4568889999999999999999998654
No 275
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=42.47 E-value=1.4e+02 Score=25.96 Aligned_cols=76 Identities=11% Similarity=0.228 Sum_probs=55.3
Q ss_pred EeCCEEEEEEEEEecCCCC--------------------------CeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcC
Q psy17026 318 YYNDIVIGAVCCRIDPNNG--------------------------RKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDG 371 (435)
Q Consensus 318 ~~~~~ivG~~~~~~~~~~~--------------------------~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g 371 (435)
..+|++++.+.+......+ ...+++.++-. +.|.+..|+..+...+...|
T Consensus 41 ~~~g~l~aa~G~r~A~~~~LFlEqYLd~piE~~l~~~~g~~v~R~~IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g 116 (179)
T PF12261_consen 41 DSDGELVAAAGLRFASQEPLFLEQYLDQPIEQLLSRRFGRPVSRSQIVEVGNLASF----SPGAARLLFAALAQLLAQQG 116 (179)
T ss_pred cCCCCEEEEEeecccCCCCcchhhhcCCcHHHHHHhhcCCCcchhheeEeechhhc----CcccHHHHHHHHHHHHHHCC
Confidence 3577888877776655332 34555555443 58999999999999999999
Q ss_pred CccEEEEEEEcCCHHHHHHHHhcCcEEEeE
Q psy17026 372 NFDSIYLHVQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 372 ~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
++- .+.+......+++.++|......
T Consensus 117 -~~w---~vfTaT~~lr~~~~rlgl~~~~L 142 (179)
T PF12261_consen 117 -FEW---VVFTATRQLRNLFRRLGLPPTVL 142 (179)
T ss_pred -CCE---EEEeCCHHHHHHHHHcCCCceec
Confidence 554 44455558999999999988654
No 276
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=42.42 E-value=1.6e+02 Score=26.94 Aligned_cols=73 Identities=10% Similarity=0.128 Sum_probs=55.6
Q ss_pred CCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEE
Q psy17026 320 NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEI 398 (435)
Q Consensus 320 ~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~ 398 (435)
.|++|+.+++..-+++- -.....-+|++...++|+..+-.=+.++.+.| ...++|.....+ ..++--|.-|++
T Consensus 159 ~G~LvAVavtDvL~dGl---SsVY~FydPd~s~~SLGt~~iL~~I~~aq~~~-l~yvYLGYwI~~--c~KM~YKa~f~P 231 (253)
T COG2935 159 EGKLVAVAVTDVLPDGL---SSVYTFYDPDMSKRSLGTLSILDQIAIAQRLG-LPYVYLGYWIKG--CPKMNYKARFSP 231 (253)
T ss_pred CCcEEEEEeeecccCcc---eeEEEEeCCChhhhcchHHHHHHHHHHHHHhC-CCeEEEEEEECC--ccccCcccccCh
Confidence 79999998888887663 23334569999999999999999999999998 999999887765 333333444443
No 277
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=41.21 E-value=35 Score=31.51 Aligned_cols=96 Identities=10% Similarity=0.166 Sum_probs=58.4
Q ss_pred EEcCCchhHHHHHHHhHhhCCCCC-----CHHHHHHHHhc---CceEEEEEeCCEEEEEEEEEecCCCCC-eEEEEEEEE
Q psy17026 276 LGDVTPHNIKQLKRLNTVVFPVSY-----NEKFYKDVLEA---GELAKLAYYNDIVIGAVCCRIDPNNGR-KLYIMTLGC 346 (435)
Q Consensus 276 ir~~~~~d~~~~~~l~~~~~~~~~-----~~~~~~~~~~~---~~~~~v~~~~~~ivG~~~~~~~~~~~~-~~~i~~i~V 346 (435)
++++..=.-+++.+++.+.|...| ....+.+.+.. --.-.+++-+|++||+-.+.......+ .......++
T Consensus 129 v~~v~~~S~~Ela~iY~~Lf~~Rwg~~~~~~~~l~e~f~~Lr~~~fG~vL~l~~~P~Aiqlv~k~es~~wv~~D~iNgG~ 208 (264)
T PF07395_consen 129 VRPVSEFSPEELADIYIDLFQKRWGFRCYGKEHLAEFFSELRHMIFGSVLFLNGQPCAIQLVYKVESPKWVYFDYINGGY 208 (264)
T ss_pred EEEHHHCCHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHhHHhheeeEEEECCcceEEEEEEEecCCCeEEEecccCcc
Confidence 444444334444444444443333 33444444442 233457788999999987776665531 222335789
Q ss_pred CCCcccCChHHHHH----HHHHHHHHHcC
Q psy17026 347 LSPYRRLGIGSMML----EHILNYVEKDG 371 (435)
Q Consensus 347 ~p~~rgkGlg~~Ll----~~~~~~~~~~g 371 (435)
+|+++.--.|+-|+ +.+-+.+.++|
T Consensus 209 Dp~~~~~SpGSiL~w~Ni~~A~~~~~~~~ 237 (264)
T PF07395_consen 209 DPECRDFSPGSILMWLNIQDAWEYCRAQG 237 (264)
T ss_pred CcccccCCCccEEEEeeHHHHHHHHHHhC
Confidence 99999999999874 56666777776
No 278
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]
Probab=40.66 E-value=1.8e+02 Score=28.66 Aligned_cols=85 Identities=9% Similarity=0.110 Sum_probs=63.5
Q ss_pred hCCCCCCHHHHHHHHhc----C-ceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHH
Q psy17026 294 VFPVSYNEKFYKDVLEA----G-ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVE 368 (435)
Q Consensus 294 ~~~~~~~~~~~~~~~~~----~-~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~ 368 (435)
.|...|....+.+.... . ...+.+..+|++++........ .++...-.+++|++-.--=|..|+-.+++++-
T Consensus 249 lf~~~~t~~fl~dL~~~~~~d~~~rl~gL~~G~~lvAV~~~lr~~---~t~h~~l~a~dpe~~~~SPG~~lf~d~i~~~~ 325 (406)
T COG5653 249 LFRAGWTRDFLRDLFTQRAEDGSGRLFGLHAGGRLVAVHGLLRQG---GTYHAWLGAIDPEFARASPGMLLFLDLIEWAC 325 (406)
T ss_pred ccccchHHHHHHHHHhccCcCCceEEEEEeeCCEEEEEEeeeccC---CEEEEEeeccCHHHhhcCchHHHHHHHHHHHh
Confidence 45567777888777762 2 2345556688999876555444 44666677899999988899999999999999
Q ss_pred HcCCccEEEEEEEc
Q psy17026 369 KDGNFDSIYLHVQL 382 (435)
Q Consensus 369 ~~g~~~~i~l~v~~ 382 (435)
.+| +.++-+.|..
T Consensus 326 ~~g-~~~~DfgvG~ 338 (406)
T COG5653 326 GQG-LARFDFGVGD 338 (406)
T ss_pred cCC-CeEEeecCCC
Confidence 999 8888777754
No 279
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=37.83 E-value=44 Score=31.25 Aligned_cols=72 Identities=8% Similarity=0.056 Sum_probs=47.1
Q ss_pred CHHHHHHHHh---cCceEEEEEeCCEEEEEEEEEecCCCCC-eEEEEEEEECCCcccCChHHHHH----HHHHHHHHHcC
Q psy17026 300 NEKFYKDVLE---AGELAKLAYYNDIVIGAVCCRIDPNNGR-KLYIMTLGCLSPYRRLGIGSMML----EHILNYVEKDG 371 (435)
Q Consensus 300 ~~~~~~~~~~---~~~~~~v~~~~~~ivG~~~~~~~~~~~~-~~~i~~i~V~p~~rgkGlg~~Ll----~~~~~~~~~~g 371 (435)
..+.+.+.+. +--.-.|++.+|+++|+-.+.......+ .......+++|++...-.|+-|+ +.+-+.+.+++
T Consensus 188 ~~~~l~e~f~~Lr~l~fG~VLfl~~~PcA~qlv~k~eSp~wi~~D~iNgG~Dpe~~~~spGSIL~WlNi~~A~~~~~~~~ 267 (298)
T PRK15312 188 PADNLANFFSQLRHLLFGHILYIEGIPCAFDIVLKSESQMNVYFDVPNGAVKNECMPLSPGSILMWLNISRARHYCQERQ 267 (298)
T ss_pred cHHHHHHHHHHhHHhheeeEEEECCcceEEEEEEEecCCCcEEEecccCccCcccccCCCccEEEEecHHHHHHHHHhcC
Confidence 3455555544 2333457788999999987776665532 23334578999999998888764 55555665555
No 280
>KOG4387|consensus
Probab=35.58 E-value=1.9e+02 Score=24.98 Aligned_cols=77 Identities=14% Similarity=0.116 Sum_probs=51.6
Q ss_pred EECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHH---HHHHhcCcEEEeEeecccccccccceeeeeecc
Q psy17026 345 GCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAI---DFYKKFGFEIVETKQHYYKRIEPADAYVLQKTL 421 (435)
Q Consensus 345 ~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~---~~y~k~GF~~~~~~~~~y~~~~~~~~~~m~~~l 421 (435)
..-|+-.=.+.-+.=+-+++++|-++-++.++.+....+|..-- +-+.-.||+++.-. .--....++.+.|+-.+
T Consensus 106 ~~IPdq~l~~gsKe~lvalLEfAEekl~~d~Vfi~F~K~R~dr~~LlrtfsyvGFEpvrp~--HP~~pp~~~~ffM~Y~~ 183 (191)
T KOG4387|consen 106 FEIPDQALDVGSKEGLVALLEFAEEKLHVDKVFICFDKNREDRAALLRTFSYVGFEPVRPD--HPVVPPRPDVFFMVYPL 183 (191)
T ss_pred EecCcchhcccchHhHHHHHHHHHHhhccceEEEEEecCccChHhhhhhehcceeeecCCC--CCCCCCccceEEEEEee
Confidence 33444444455666777788888777669999999988776433 44456699988743 22223568899998887
Q ss_pred cC
Q psy17026 422 RN 423 (435)
Q Consensus 422 ~~ 423 (435)
.+
T Consensus 184 er 185 (191)
T KOG4387|consen 184 ER 185 (191)
T ss_pred cc
Confidence 64
No 281
>cd07235 MRD Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.
Probab=34.14 E-value=40 Score=26.40 Aligned_cols=24 Identities=29% Similarity=0.623 Sum_probs=17.6
Q ss_pred EEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 206 IYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 206 v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
+.+.|..- .+|++||+++||+...
T Consensus 4 i~l~V~D~-~~a~~FY~~LGf~~~~ 27 (122)
T cd07235 4 VGIVVADM-AKSLDFYRRLGFDFPE 27 (122)
T ss_pred EEEEeccH-HHHHHHHHHhCceecC
Confidence 45555443 4899999999998753
No 282
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=33.24 E-value=2.3e+02 Score=21.89 Aligned_cols=58 Identities=12% Similarity=0.156 Sum_probs=41.7
Q ss_pred CCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCH
Q psy17026 150 NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNND 215 (435)
Q Consensus 150 ~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~ 215 (435)
++..=|.+.+.... ....++..++|.+.-++.|++..+.+.+.+. ...+...+.++|+
T Consensus 17 de~y~~~AIvt~~~--~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d------~~~L~Wrsr~~n~ 74 (98)
T cd03173 17 DEPLEGVAIVTYEG--NSIPYLDKFAVSDHLWLNNVTDNIFNLIRKD------FPSLLWRVRENDA 74 (98)
T ss_pred cCCccEEEEEecCC--CCCEEEEEEEEcccccccCHHHHHHHHHHhh------CCeeEEEeCCCCC
Confidence 34344444444433 2357999999999999999999999988765 2467778888774
No 283
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]
Probab=29.21 E-value=3.6e+02 Score=26.59 Aligned_cols=84 Identities=8% Similarity=0.083 Sum_probs=62.3
Q ss_pred CCccccHHHHHHHHhcC----C-eEEEEEECCeEEEEEEEEeecCCCCeEEEEEEEeCCCccCCCHHHHHHHHHHHHHHh
Q psy17026 125 FPVSYNEKFYKDVLEAG----E-LAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEK 199 (435)
Q Consensus 125 ~~~~~~~~~~~~~l~~~----~-~~~v~~~~g~iVG~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~ 199 (435)
|..+|..+++.+..... . ..+....+|++|+......... +.+..-..++|++=+--=|-.|+-.+++++..
T Consensus 250 f~~~~t~~fl~dL~~~~~~d~~~rl~gL~~G~~lvAV~~~lr~~~---t~h~~l~a~dpe~~~~SPG~~lf~d~i~~~~~ 326 (406)
T COG5653 250 FRAGWTRDFLRDLFTQRAEDGSGRLFGLHAGGRLVAVHGLLRQGG---TYHAWLGAIDPEFARASPGMLLFLDLIEWACG 326 (406)
T ss_pred cccchHHHHHHHHHhccCcCCceEEEEEeeCCEEEEEEeeeccCC---EEEEEeeccCHHHhhcCchHHHHHHHHHHHhc
Confidence 45667778887776532 2 2445666889998776665554 34444566899999889999999999999999
Q ss_pred cCCccEEEEEEEc
Q psy17026 200 DGNFDSIYLHVQL 212 (435)
Q Consensus 200 ~g~~~~v~l~v~~ 212 (435)
+| +.++-+.|-.
T Consensus 327 ~g-~~~~DfgvG~ 338 (406)
T COG5653 327 QG-LARFDFGVGD 338 (406)
T ss_pred CC-CeEEeecCCC
Confidence 99 8888888754
No 284
>PF11633 SUD-M: Single-stranded poly(A) binding domain; InterPro: IPR024375 This domain identifies non-structural protein 3 (Nsp3). It is found in human SARS coronavirus polyprotein 1a and 1ab, and in related coronavirus polyproteins [].; PDB: 2KQV_A 2W2G_A 2WCT_D 2JZE_A 2JZF_A 2RNK_A 2JZD_A.
Probab=28.86 E-value=1.7e+02 Score=23.99 Aligned_cols=50 Identities=20% Similarity=0.211 Sum_probs=32.3
Q ss_pred cCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHHHhcCcEEEeEeecc
Q psy17026 352 RLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVETKQHY 405 (435)
Q Consensus 352 gkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 405 (435)
+-++-..=++.+++++++.| ..+.+-.++.+..++.++-||.+..-..++
T Consensus 17 ll~~v~~~~r~ml~~ak~~g----~~~pvc~D~~A~~k~lkr~gv~~~egl~t~ 66 (142)
T PF11633_consen 17 LLGVVSWNFRAMLQHAKETG----LLCPVCIDYPAFCKTLKRKGVDPKEGLQTV 66 (142)
T ss_dssp GGCEE---CHHHHHHHHHHT-----EEEEETT-HHHHHHHHHTTS---SEEEES
T ss_pred eeeeeehhHHHHHHHHHhcC----cEEEEEeccHHHHHHHhccCcccccceEEe
Confidence 33444455678889999988 677888889999999999888886654443
No 285
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=28.67 E-value=2.8e+02 Score=21.43 Aligned_cols=63 Identities=11% Similarity=0.186 Sum_probs=41.9
Q ss_pred CCEEEEEEEEEecCCCCCeEEEEEEEECCCcccCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCHHHHHHH
Q psy17026 320 NDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFY 391 (435)
Q Consensus 320 ~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~~a~~~y 391 (435)
++..-|.+++.... ....++..++|.+..++.|++..+.+.+.+.. ..+.-.+..+| +..++|
T Consensus 17 de~y~~~AIvt~~~--~~v~~LdkFav~~~~~~~gv~D~vf~~i~~d~------~~L~Wrsr~~n-~~n~Wy 79 (98)
T cd03173 17 DEPLEGVAIVTYEG--NSIPYLDKFAVSDHLWLNNVTDNIFNLIRKDF------PSLLWRVREND-ANLKWY 79 (98)
T ss_pred cCCccEEEEEecCC--CCCEEEEEEEEcccccccCHHHHHHHHHHhhC------CeeEEEeCCCC-CccceE
Confidence 33344444443332 24579999999999999999999999887652 23555566555 445555
No 286
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=26.17 E-value=53 Score=26.57 Aligned_cols=28 Identities=25% Similarity=0.468 Sum_probs=20.5
Q ss_pred ccEEEEEEEcCCHHHHHHHHhCCCEEEEE
Q psy17026 203 FDSIYLHVQLNNDVAIDFYKKFGFEIVET 231 (435)
Q Consensus 203 ~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 231 (435)
+..+.+.|..- .++++||+++||+....
T Consensus 4 i~Hi~i~v~Dl-~~s~~FY~~LG~~~~~~ 31 (142)
T cd08353 4 MDNVGIVVRDL-EAAIAFFLELGLELEGR 31 (142)
T ss_pred eeeEEEEeCCH-HHHHHHHHHcCCEEccc
Confidence 45566666543 48999999999987654
No 287
>COG2348 Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]
Probab=25.43 E-value=6.3e+02 Score=25.23 Aligned_cols=94 Identities=11% Similarity=0.024 Sum_probs=58.2
Q ss_pred ceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECC--CcccCChHHHHHHHHHHHHHHcCCccEEEEEEE--------
Q psy17026 312 ELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLS--PYRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQ-------- 381 (435)
Q Consensus 312 ~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p--~~rgkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~-------- 381 (435)
.+.+.+..++..++.+++....-.. ..+...+-=.| +|-++.+-..++..+.+++++.. +-.+.++..
T Consensus 40 ~~~~~v~~~~~~v~aa~ll~k~~~~-~~~~~~~prGPv~dy~~~~l~~~~~k~l~~y~k~~~-~l~i~idP~l~~~~~~~ 117 (418)
T COG2348 40 AHLIGVKKDGNAVIAASLLSKKLPL-GFYTYYIPRGPVMDYSNQELLDYFIKELKKYAKSKR-ALFIKIDPYLVYQQFDL 117 (418)
T ss_pred ceeEEEEecCceeeeeeeeeeeccC-CceEEEecCCCcccccchHHHHHHHHHHHHHHhhcc-ceEEEeccchhhhcccC
Confidence 3445666666665554443322221 11222211244 88888888888888888888865 433333221
Q ss_pred -------cCCHHHHHHHHhcCcEEEeEeecccc
Q psy17026 382 -------LNNDVAIDFYKKFGFEIVETKQHYYK 407 (435)
Q Consensus 382 -------~~N~~a~~~y~k~GF~~~~~~~~~y~ 407 (435)
..|...+..+.++||+..|-...+-.
T Consensus 118 ~~~~~~~~~n~~~i~~l~~lG~k~~g~t~~~~~ 150 (418)
T COG2348 118 GGEIIENYNNLAIIKLLKDLGYKHSGFTKGLDD 150 (418)
T ss_pred CCccccCcchHHHHHHHHHhhhhhcCcccccCc
Confidence 45678889999999999987766643
No 288
>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=24.50 E-value=1e+02 Score=24.09 Aligned_cols=16 Identities=31% Similarity=0.692 Sum_probs=14.0
Q ss_pred HHHHHHHHhCCCEEEE
Q psy17026 215 DVAIDFYKKFGFEIVE 230 (435)
Q Consensus 215 ~~a~~~y~k~GF~~~~ 230 (435)
.+|++||+.+||+...
T Consensus 12 ~~s~~FY~~lGf~~~~ 27 (124)
T cd09012 12 EKSTAFYTALGFEFNP 27 (124)
T ss_pred HHHHHHHHHCCCEEcc
Confidence 5899999999999764
No 289
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=23.66 E-value=1.4e+02 Score=24.28 Aligned_cols=46 Identities=17% Similarity=0.135 Sum_probs=35.1
Q ss_pred ccCCCHHHHHHHHHHHHHHhcCCccEEEEEEEcCCHHHHHHHHhCCCEEEE
Q psy17026 180 YRRLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNNDVAIDFYKKFGFEIVE 230 (435)
Q Consensus 180 ~rg~GiG~~Ll~~~~~~a~~~g~~~~v~l~v~~~N~~a~~~y~k~GF~~~~ 230 (435)
=||-|+|+.+++.+.+.+.+ .+.+...-.|.-|-.-..|.|=..-.
T Consensus 7 GQGGGiG~~iv~~lr~~~~~-----~~eI~AlGTNa~AT~~MlKaGA~~gA 52 (131)
T PF12953_consen 7 GQGGGIGKQIVEKLRKELPE-----EVEIIALGTNAIATSAMLKAGANEGA 52 (131)
T ss_pred CCCChhHHHHHHHHHHhCCC-----CcEEEEEehhHHHHHHHHHcCCCCcc
Confidence 37899999999988776543 36677777887888888898876443
No 290
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=23.49 E-value=2.7e+02 Score=25.78 Aligned_cols=97 Identities=11% Similarity=0.239 Sum_probs=59.1
Q ss_pred eEEeeCCcccHHHHH-HHhHhcCCcc-ccHHHHHHHHhc-CC--eEEEEEECCeEEEEEEEEeecCCCCeEE--EEEEEe
Q psy17026 104 IELGDVTPHNIKQLK-RLNTVVFPVS-YNEKFYKDVLEA-GE--LAKLAYYNDIVIGAVCCRIDPNNGRKLY--IMTLGC 176 (435)
Q Consensus 104 i~ir~~~~~d~~~l~-~l~~~~~~~~-~~~~~~~~~l~~-~~--~~~v~~~~g~iVG~~~~~~~~~~~~~~~--i~~l~V 176 (435)
..+..++++++..+. +|....|... +..+.+.+.+.. .+ ..-|++-+|++|++-.+....... ..+ ...-++
T Consensus 130 ~~v~~~S~~Ela~iY~~Lf~~Rwg~~~~~~~~l~e~f~~Lr~~~fG~vL~l~~~P~Aiqlv~k~es~~-wv~~D~iNgG~ 208 (264)
T PF07395_consen 130 RPVSEFSPEELADIYIDLFQKRWGFRCYGKEHLAEFFSELRHMIFGSVLFLNGQPCAIQLVYKVESPK-WVYFDYINGGY 208 (264)
T ss_pred EEHHHCCHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHhHHhheeeEEEECCcceEEEEEEEecCCC-eEEEecccCcc
Confidence 344555555555443 3444444322 333444444432 22 334788899999998877666543 222 224568
Q ss_pred CCCccCCCHHHHH----HHHHHHHHHhcC
Q psy17026 177 LSPYRRLGIGSMM----LEHILNYVEKDG 201 (435)
Q Consensus 177 ~p~~rg~GiG~~L----l~~~~~~a~~~g 201 (435)
+|+++..-.|+.| ++.+.++|+++|
T Consensus 209 Dp~~~~~SpGSiL~w~Ni~~A~~~~~~~~ 237 (264)
T PF07395_consen 209 DPECRDFSPGSILMWLNIQDAWEYCRAQG 237 (264)
T ss_pred CcccccCCCccEEEEeeHHHHHHHHHHhC
Confidence 9999999999987 467777888887
No 291
>PF06557 DUF1122: Protein of unknown function (DUF1122); InterPro: IPR008304 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2ARH_C.
Probab=22.96 E-value=4.8e+02 Score=22.25 Aligned_cols=90 Identities=12% Similarity=0.148 Sum_probs=0.0
Q ss_pred cCceEEEEEeCCEEEEEEEEEecCCCCCeEEEEEEEECCCcc----cCChHHHHHHHHHHHHHHcCCccEEEEEEEcCCH
Q psy17026 310 AGELAKLAYYNDIVIGAVCCRIDPNNGRKLYIMTLGCLSPYR----RLGIGSMMLEHILNYVEKDGNFDSIYLHVQLNND 385 (435)
Q Consensus 310 ~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~r----gkGlg~~Ll~~~~~~~~~~g~~~~i~l~v~~~N~ 385 (435)
.....+.+..+++.++++-+..... --.-++.-+-+.|.++ |.++=..|+..+-+++...+ ++++....+.+
T Consensus 16 ~Ee~n~~l~~~~~~l~~~kvF~GR~-yY~pW~EiFni~p~~~~~~~~s~~E~~l~~~~~~~l~pg~---~lfVeY~~D~e 91 (170)
T PF06557_consen 16 KEEVNFELYLGGRHLCHVKVFFGRP-YYRPWAEIFNINPWLRVVFFGSPLEDELYKLFSRYLEPGG---RLFVEYVEDRE 91 (170)
T ss_dssp TTEEEEEEEETTEEEEEEEEE--BT-TB--EEEEE---GGGHHHHTTSHHHHHHHHHHHTT----S---EEEEE-TT-HH
T ss_pred cceeeEEEEECCeeEEEEEEecCCC-CCcchheeecccchhcccccCChHHHHHHHHHHHHhhhcC---eEEEEEecCHH
Q ss_pred HHHHHH--------------HhcCcEEEeEeeccc
Q psy17026 386 VAIDFY--------------KKFGFEIVETKQHYY 406 (435)
Q Consensus 386 ~a~~~y--------------~k~GF~~~~~~~~~y 406 (435)
-..+++ .++||.... +||
T Consensus 92 T~~~L~~G~pp~~TrLG~~Ll~~GFtwfK---dWY 123 (170)
T PF06557_consen 92 TRRQLQRGVPPAETRLGFSLLKAGFTWFK---DWY 123 (170)
T ss_dssp HHHHHHTT--GGGSHHHHHHHTTT--EEE---EEE
T ss_pred HHHHHHcCCCcccchhHHHHHhCCcEEEe---eee
No 292
>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=20.58 E-value=77 Score=24.61 Aligned_cols=21 Identities=24% Similarity=0.512 Sum_probs=16.7
Q ss_pred HHHHHHHHhcCcEEEeEeecc
Q psy17026 385 DVAIDFYKKFGFEIVETKQHY 405 (435)
Q Consensus 385 ~~a~~~y~k~GF~~~~~~~~~ 405 (435)
+.+++||+.+||+.......+
T Consensus 13 ~~s~~FY~~LGf~~~~~~~~~ 33 (113)
T cd08356 13 AESKQFYQALGFELEWENDNL 33 (113)
T ss_pred HHHHHHHHHhCCeeEecCCCE
Confidence 479999999999998765433
No 293
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.43 E-value=1.6e+02 Score=26.17 Aligned_cols=38 Identities=26% Similarity=0.414 Sum_probs=28.2
Q ss_pred HHHHHHHcCCccEEEEE---EEcCCHHHHHHHHhcCcEEEeE
Q psy17026 363 ILNYVEKDGNFDSIYLH---VQLNNDVAIDFYKKFGFEIVET 401 (435)
Q Consensus 363 ~~~~~~~~g~~~~i~l~---v~~~N~~a~~~y~k~GF~~~~~ 401 (435)
+++-++..+ ++++.+- ..+-|.+...|+++.||+++.-
T Consensus 109 vv~aL~al~-a~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~~ 149 (238)
T COG3473 109 VVEALNALG-AQRISVLTPYIDEVNQREIEFLEANGFEIVDF 149 (238)
T ss_pred HHHHHHhhC-cceEEEeccchhhhhhHHHHHHHhCCeEEEEe
Confidence 344455556 6777664 4577889999999999999875
Done!