Query psy17028
Match_columns 334
No_of_seqs 214 out of 1049
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 20:00:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17028.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17028hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tfm_A Myosin X; split PH doma 99.9 3.6E-24 1.2E-28 196.2 12.6 135 177-316 18-156 (228)
2 2dn6_A KIAA0640 protein; PH do 99.9 8.7E-23 3E-27 164.4 13.5 101 215-318 5-106 (115)
3 1pls_A Pleckstrin homology dom 99.9 1.1E-22 3.7E-27 164.2 14.1 101 216-319 3-105 (113)
4 1x1f_A Signal-transducing adap 99.9 1.1E-22 3.7E-27 176.4 13.0 99 215-316 15-114 (149)
5 1wi1_A Calcium-dependent activ 99.9 8.6E-23 3E-27 173.0 12.0 106 214-324 4-118 (126)
6 1fao_A Dual adaptor of phospho 99.9 3.9E-22 1.3E-26 163.9 13.7 100 215-318 15-115 (126)
7 2cod_A Centaurin-delta 1; ARF 99.9 1.2E-21 4.1E-26 158.8 15.2 95 216-317 6-101 (115)
8 1wgq_A FYVE, rhogef and PH dom 99.9 8.3E-22 2.8E-26 158.3 13.9 100 214-317 4-105 (109)
9 1eaz_A Tandem PH domain contai 99.9 4.1E-22 1.4E-26 162.7 12.1 104 215-321 11-117 (125)
10 1v5u_A SBF1, SET binding facto 99.9 4.2E-22 1.4E-26 160.9 11.8 100 215-317 5-113 (117)
11 1v89_A Hypothetical protein KI 99.9 1.5E-21 5.3E-26 157.2 14.3 99 216-317 6-114 (118)
12 1u5d_A SKAP55, SRC kinase-asso 99.9 6.3E-22 2.2E-26 156.8 11.6 101 216-316 1-106 (108)
13 1v88_A Oxysterol binding prote 99.9 1E-21 3.5E-26 166.1 12.4 97 215-317 5-126 (130)
14 2rsg_A Collagen type IV alpha- 99.9 1E-21 3.4E-26 154.2 10.8 89 218-313 1-92 (94)
15 1fgy_A GRP1; PH domain, signal 99.9 3.1E-21 1.1E-25 157.6 13.8 98 217-319 4-124 (127)
16 1upq_A PEPP1; PH domain, phosp 99.9 2.5E-21 8.7E-26 157.8 13.2 107 217-325 10-119 (123)
17 2lul_A Tyrosine-protein kinase 99.9 2.8E-21 9.4E-26 168.7 14.1 104 217-320 14-126 (164)
18 2dhk_A TBC1 domain family memb 99.9 2.8E-21 9.6E-26 158.7 13.1 98 216-317 6-106 (119)
19 1v5p_A Pleckstrin homology dom 99.9 1.9E-21 6.6E-26 163.5 11.8 99 216-316 13-121 (126)
20 2i5f_A Pleckstrin; PH domain, 99.9 5.6E-21 1.9E-25 152.4 13.7 96 216-314 5-108 (109)
21 1x05_A Pleckstrin; PH domain, 99.9 5.5E-21 1.9E-25 157.6 13.7 98 216-316 16-121 (129)
22 2p0d_A RHO GTPase-activating p 99.9 4.2E-21 1.4E-25 161.0 13.2 101 215-317 9-126 (129)
23 2d9v_A Pleckstrin homology dom 99.9 9.4E-21 3.2E-25 158.3 14.9 99 215-316 5-115 (130)
24 3cxb_B Pleckstrin homology dom 99.9 5E-21 1.7E-25 156.7 12.8 97 220-317 2-103 (112)
25 1btk_A Bruton'S tyrosine kinas 99.9 1.9E-21 6.5E-26 171.0 10.9 102 217-318 2-135 (169)
26 2d9x_A Oxysterol binding prote 99.9 1.6E-21 5.4E-26 160.0 9.6 101 216-323 6-112 (120)
27 2dkp_A Pleckstrin homology dom 99.9 7.3E-21 2.5E-25 156.1 13.6 98 216-315 19-119 (128)
28 2da0_A 130-kDa phosphatidylino 99.8 1.9E-20 6.6E-25 152.4 15.0 96 217-318 9-104 (114)
29 2w2x_D 1-phosphatidylinositol- 99.8 1.5E-21 5.2E-26 162.5 8.6 98 217-317 11-121 (124)
30 1dyn_A Dynamin; signal transdu 99.8 7E-21 2.4E-25 160.7 12.1 94 218-313 12-115 (125)
31 3aj4_A Pleckstrin homology dom 99.8 2.4E-21 8.1E-26 156.1 8.7 95 217-314 4-110 (112)
32 2yry_A Pleckstrin homology dom 99.8 1.6E-20 5.3E-25 152.9 13.4 98 216-315 20-120 (122)
33 2d9y_A Pleckstrin homology dom 99.8 1.5E-20 5.1E-25 151.7 13.1 98 216-315 9-109 (117)
34 1wg7_A Dedicator of cytokinesi 99.8 4E-21 1.4E-25 162.8 9.3 101 215-317 15-126 (150)
35 3rcp_A Pleckstrin homology dom 99.8 8.3E-21 2.8E-25 150.8 10.4 91 220-317 1-95 (103)
36 1unq_A RAC-alpha serine/threon 99.8 1.5E-21 5E-26 160.5 6.1 103 216-321 6-116 (125)
37 1u5f_A SRC-associated adaptor 99.8 1.4E-20 4.8E-25 159.6 12.3 102 216-317 15-121 (148)
38 2rlo_A Centaurin-gamma 1; spli 99.8 9.6E-21 3.3E-25 157.4 9.5 98 217-317 3-126 (128)
39 4a6h_A Phosphatidylinositol 4, 99.8 4.2E-20 1.4E-24 154.6 12.4 94 218-314 6-117 (120)
40 1x1g_A Pleckstrin 2; PH domain 99.8 2.6E-20 8.9E-25 153.3 10.2 99 215-316 15-125 (129)
41 2y7b_A Actin-binding protein a 99.8 2.9E-20 9.9E-25 153.9 10.2 99 216-316 3-129 (134)
42 1wjm_A Beta-spectrin III; PH d 99.8 3.4E-20 1.2E-24 152.4 10.5 101 217-318 7-120 (123)
43 2coc_A FYVE, rhogef and PH dom 99.8 7E-20 2.4E-24 151.6 11.3 97 216-316 6-107 (112)
44 2j59_M RHO-GTPase activating p 99.8 7.5E-20 2.6E-24 158.2 10.5 97 217-315 2-111 (168)
45 1btn_A Beta-spectrin; signal t 99.8 9E-20 3.1E-24 144.7 9.8 93 220-313 1-106 (106)
46 2cof_A Protein KIAA1914; PH do 99.8 6.9E-20 2.3E-24 147.3 8.8 94 216-316 6-102 (107)
47 1u5e_A SRC-associated adaptor 99.8 1.5E-19 5.2E-24 164.2 11.8 100 217-316 105-209 (211)
48 3lju_X ARF-GAP with dual PH do 99.8 2.3E-19 7.8E-24 176.6 11.7 134 163-316 228-373 (386)
49 3pp2_A RHO GTPase-activating p 99.8 5.6E-19 1.9E-23 147.1 11.6 102 213-315 3-123 (124)
50 1dro_A Beta-spectrin; cytoskel 99.8 1.6E-19 5.6E-24 148.8 8.2 99 217-316 7-120 (122)
51 3a8p_A T-lymphoma invasion and 99.8 1.5E-18 5.3E-23 162.7 12.7 105 216-321 9-130 (263)
52 1qqg_A IRS-1, insulin receptor 99.8 1.1E-18 3.6E-23 164.0 10.6 97 216-320 8-117 (264)
53 2q13_A DCC-interacting protein 99.8 1.9E-18 6.4E-23 168.6 12.5 105 216-323 276-383 (385)
54 2r09_A Cytohesin-3; autoinhibi 99.7 7.3E-18 2.5E-22 163.5 12.9 96 217-317 212-330 (347)
55 2dtc_A RAL guanine nucleotide 99.7 1.8E-17 6.1E-22 140.4 13.2 97 219-317 2-114 (126)
56 4h8s_A DCC-interacting protein 99.7 5.4E-18 1.8E-22 166.5 10.4 103 217-323 300-406 (407)
57 2rov_A RHO-associated protein 99.7 9.4E-18 3.2E-22 139.7 8.9 94 220-315 3-115 (117)
58 3tca_A Amyloid beta A4 precurs 99.7 5.4E-17 1.9E-21 150.6 7.9 96 217-315 167-276 (291)
59 3lju_X ARF-GAP with dual PH do 99.7 1.4E-16 4.9E-21 156.7 9.0 95 217-315 145-246 (386)
60 2fjl_A 1-phosphatidylinositol- 99.6 1.4E-15 4.8E-20 132.2 12.1 94 219-315 2-148 (150)
61 2ys3_A UNC-112-related protein 99.6 3E-15 1E-19 128.2 9.7 97 217-314 8-111 (137)
62 2d9w_A Docking protein 2; PH d 99.6 1.2E-14 4E-19 122.8 12.9 99 215-316 9-122 (127)
63 4ejn_A RAC-alpha serine/threon 99.6 1.7E-15 5.7E-20 148.4 6.3 97 216-315 4-108 (446)
64 3a8n_A TIAM-1, T-lymphoma inva 99.5 1.8E-14 6.1E-19 136.7 8.5 101 215-316 8-125 (279)
65 1w1g_A HPDK1, 3-phosphoinositi 99.5 6.1E-14 2.1E-18 121.9 10.8 90 217-317 51-141 (151)
66 2coa_A Protein kinase C, D2 ty 99.4 4.5E-13 1.5E-17 112.9 10.4 100 214-316 4-120 (125)
67 3hk0_A Growth factor receptor- 99.4 1E-12 3.4E-17 123.3 12.2 97 217-316 131-241 (256)
68 2d9z_A Protein kinase C, NU ty 99.4 3.6E-12 1.2E-16 107.8 11.8 99 215-316 5-124 (129)
69 4gmv_A RAS-associated and plec 99.3 5.7E-12 1.9E-16 119.6 9.9 97 217-316 157-267 (281)
70 4f7h_A Fermitin family homolog 99.1 2.1E-10 7.3E-15 101.0 10.2 98 217-315 46-150 (173)
71 4bbk_A Kindlin-1, fermitin fam 99.1 3.5E-10 1.2E-14 98.8 9.6 98 217-315 25-129 (165)
72 1v5m_A SH2 and PH domain-conta 98.6 1.7E-07 5.8E-12 79.7 9.5 100 217-316 17-131 (136)
73 3ml4_A Protein DOK-7; tyrosine 98.6 2.9E-07 1E-11 84.4 10.3 94 217-315 8-113 (224)
74 1zc3_B Exocyst complex protein 98.4 4.2E-06 1.4E-10 68.9 11.7 97 217-316 7-108 (113)
75 1v61_A RAC/CDC42 guanine nucle 98.3 2.5E-06 8.7E-11 72.4 8.7 98 216-317 26-128 (132)
76 1mai_A Phospholipase C delta-1 98.3 2.9E-06 1E-10 71.1 8.6 80 238-317 29-123 (131)
77 3mpx_A FYVE, rhogef and PH dom 98.1 6E-06 2.1E-10 80.8 9.1 97 214-317 239-339 (434)
78 2vrw_B P95VAV, VAV1, proto-onc 98.1 2.5E-05 8.5E-10 76.0 11.8 104 214-320 230-340 (406)
79 3ky9_A Proto-oncogene VAV; cal 98.0 2.9E-05 1E-09 79.5 11.3 106 212-320 400-512 (587)
80 3t06_A PDZ-rhogef, RHO guanine 97.9 9.4E-05 3.2E-09 72.0 12.6 96 215-318 292-411 (418)
81 3tfm_A Myosin X; split PH doma 97.9 1.3E-05 4.3E-10 72.9 5.7 35 216-253 19-53 (228)
82 2lg1_A A-kinase anchor protein 97.9 9.6E-05 3.3E-09 65.6 11.0 100 215-322 68-179 (185)
83 1dbh_A Protein (human SOS 1); 97.8 0.00011 3.6E-09 70.1 11.8 93 216-316 245-350 (354)
84 2pz1_A RHO guanine nucleotide 97.8 0.00013 4.4E-09 72.3 12.8 101 215-318 331-443 (466)
85 1xcg_A PDZ-rhogef, RHO guanine 97.8 0.00019 6.6E-09 68.5 13.0 94 215-316 250-367 (368)
86 2dfk_A Collybistin II; DH doma 97.8 0.00016 5.4E-09 70.6 11.8 100 215-317 254-365 (402)
87 1nty_A Triple functional domai 97.7 0.00021 7.3E-09 67.0 11.4 99 215-317 200-310 (311)
88 3qwm_A Iqsec1, IQ motif and SE 97.6 0.00059 2E-08 58.5 11.2 80 237-318 33-125 (140)
89 3jzy_A Intersectin 2; C2 domai 97.6 9.4E-06 3.2E-10 80.6 0.0 95 216-318 251-365 (510)
90 3p6a_A RHO guanine nucleotide 97.6 0.00046 1.6E-08 66.0 11.5 94 216-316 257-372 (377)
91 1txd_A RHO guanine nucleotide 97.5 0.00034 1.2E-08 67.4 10.3 95 216-317 255-371 (385)
92 1kz7_A Guanine nucleotide exch 97.5 0.00071 2.4E-08 64.7 12.4 100 214-316 206-326 (353)
93 2z0q_A XPLN, RHO guanine nucle 97.5 0.00037 1.3E-08 66.1 10.3 90 217-314 231-345 (346)
94 3v5w_A G-protein coupled recep 97.5 0.00082 2.8E-08 70.7 13.2 97 216-317 557-654 (689)
95 3odw_A RHO guanine nucleotide 97.5 0.00055 1.9E-08 69.6 11.4 96 216-318 410-527 (536)
96 1foe_A T-lymphoma invasion and 97.4 0.0011 3.7E-08 63.7 12.3 104 215-321 235-372 (377)
97 2rgn_B RHOA/RAC/CDC42 exchange 97.3 0.0013 4.4E-08 63.0 11.3 99 215-316 204-319 (354)
98 3ksy_A SOS-1, SON of sevenless 96.6 0.0065 2.2E-07 66.5 9.9 92 216-315 442-546 (1049)
99 1z87_A Alpha-1-syntrophin; pro 96.0 0.029 1E-06 52.3 9.6 56 260-315 205-262 (263)
100 3zvr_A Dynamin-1; hydrolase, D 96.0 0.043 1.5E-06 58.4 11.9 93 218-311 540-641 (772)
101 2adz_A Alpha-1-syntrophin; pro 95.6 0.033 1.1E-06 49.4 8.0 56 260-315 120-177 (178)
102 2zkm_X 1-phosphatidylinositol- 94.0 0.1 3.5E-06 55.7 7.8 78 238-317 34-137 (799)
103 3tjz_B Coatomer subunit gamma; 93.5 0.13 4.3E-06 50.0 6.9 104 12-118 170-276 (355)
104 1fho_A UNC-89; pleckstrin homo 93.1 0.22 7.4E-06 41.1 6.7 97 213-315 5-112 (119)
105 3qr0_A Phospholipase C-beta (P 92.8 0.24 8.2E-06 53.0 8.3 79 238-316 39-143 (816)
106 3ohm_B 1-phosphatidylinositol- 92.2 0.3 1E-05 52.7 8.3 95 218-316 20-140 (885)
107 3ulb_A Target of rapamycin com 91.1 3.9 0.00013 33.9 12.0 79 236-317 26-116 (121)
108 3a98_B Engulfment and cell mot 90.2 1.4 4.6E-05 39.6 9.2 76 240-315 51-150 (203)
109 2vgl_A Adaptor protein complex 89.6 1.1 3.7E-05 45.9 9.1 111 12-124 323-439 (621)
110 1w63_A Adapter-related protein 89.1 0.45 1.5E-05 48.4 5.8 106 12-117 173-302 (618)
111 2vgl_B AP-2 complex subunit be 84.5 2.6 8.8E-05 42.4 8.4 103 17-121 282-385 (591)
112 1w63_A Adapter-related protein 82.3 3.5 0.00012 41.8 8.4 109 13-123 308-419 (618)
113 2vgl_B AP-2 complex subunit be 81.5 7.4 0.00025 39.0 10.3 109 14-123 386-498 (591)
114 3hie_A Protein PSL1, exocyst c 81.0 9.7 0.00033 33.3 9.5 78 237-318 64-151 (171)
115 4db6_A Armadillo repeat protei 77.2 13 0.00045 30.8 9.1 103 18-120 54-169 (210)
116 4hxt_A De novo protein OR329; 75.9 17 0.00059 30.5 9.6 101 19-119 87-200 (252)
117 2vgl_A Adaptor protein complex 72.8 6.3 0.00021 40.2 7.0 77 13-89 180-278 (621)
118 3a58_A Exocyst complex compone 72.3 11 0.00037 35.9 7.9 79 236-318 133-221 (320)
119 4db8_A Armadillo-repeat protei 70.4 27 0.00092 29.6 9.6 84 19-102 139-235 (252)
120 1ibr_B P95, importin beta-1 su 69.6 33 0.0011 31.6 10.7 114 16-129 126-257 (462)
121 4db8_A Armadillo-repeat protei 67.3 23 0.00078 30.1 8.5 103 18-120 54-169 (252)
122 4db6_A Armadillo repeat protei 64.9 34 0.0012 28.1 8.9 105 15-119 9-126 (210)
123 1jdh_A Beta-catenin; beta-cate 63.9 22 0.00074 33.8 8.3 113 8-120 7-132 (529)
124 4hxt_A De novo protein OR329; 61.8 48 0.0016 27.6 9.4 104 19-122 129-245 (252)
125 1oyz_A Hypothetical protein YI 58.3 44 0.0015 29.0 8.8 83 19-102 55-141 (280)
126 4fdd_A Transportin-1; heat rep 56.6 6.2 0.00021 40.9 3.3 110 17-129 628-753 (852)
127 2jdq_A Importin alpha-1 subuni 55.0 49 0.0017 30.5 8.9 101 18-118 107-221 (450)
128 2jdq_A Importin alpha-1 subuni 54.8 44 0.0015 30.8 8.5 104 15-118 189-305 (450)
129 3tjz_B Coatomer subunit gamma; 53.9 31 0.001 33.1 7.4 85 13-101 134-221 (355)
130 1wa5_B Importin alpha subunit; 53.5 83 0.0028 30.2 10.7 105 14-118 253-370 (530)
131 2db0_A 253AA long hypothetical 51.4 73 0.0025 28.9 8.9 117 17-137 31-155 (253)
132 2lnm_A Protein TIC 40, chlorop 50.6 26 0.00087 25.1 4.9 50 20-82 11-60 (62)
133 1wa5_B Importin alpha subunit; 49.4 60 0.0021 31.2 8.9 102 18-119 130-245 (530)
134 2ajw_A Alpha-conotoxin MII; al 49.0 4.6 0.00016 24.2 0.4 9 5-13 11-19 (26)
135 3ut4_A CTHE_2751, putative unc 48.2 81 0.0028 26.4 8.2 81 12-119 25-107 (134)
136 4fdd_A Transportin-1; heat rep 47.6 38 0.0013 34.9 7.5 108 13-120 354-473 (852)
137 2db0_A 253AA long hypothetical 47.0 34 0.0012 31.1 6.0 82 13-95 64-169 (253)
138 4b8j_A Importin subunit alpha- 46.2 1.1E+02 0.0038 29.2 10.2 103 16-118 72-189 (528)
139 3ltm_A Alpha-REP4; protein eng 45.0 63 0.0022 26.7 7.3 57 18-80 81-140 (211)
140 3voq_A Target of rapamycin com 43.5 35 0.0012 28.3 5.2 78 238-316 30-120 (125)
141 4b8j_A Importin subunit alpha- 42.5 1.6E+02 0.0054 28.1 10.6 101 19-119 203-316 (528)
142 1te4_A Conserved protein MTH18 41.4 59 0.002 25.2 6.2 71 19-100 43-115 (131)
143 3ltm_A Alpha-REP4; protein eng 41.0 94 0.0032 25.6 7.8 74 18-102 19-94 (211)
144 2z6h_A Catenin beta-1, beta-ca 40.5 1.1E+02 0.0039 30.3 9.5 111 10-120 6-129 (644)
145 3ltj_A Alpharep-4; protein eng 39.6 1.4E+02 0.0048 24.2 8.6 16 65-80 120-135 (201)
146 1xqr_A HSPBP1 protein; armadil 39.4 1.1E+02 0.0038 28.0 8.6 103 19-121 82-199 (296)
147 2rrf_A Zinc finger FYVE domain 37.9 1.8E+02 0.0063 24.4 8.9 72 242-316 39-128 (141)
148 2x19_B Importin-13; nuclear tr 37.7 48 0.0017 34.5 6.5 46 13-58 524-569 (963)
149 3nmz_A APC variant protein; pr 36.1 40 0.0014 33.3 5.2 35 19-53 71-119 (458)
150 2qk2_A LP04448P; mini spindles 35.7 1.8E+02 0.0062 24.6 9.0 83 15-99 95-186 (242)
151 3ul1_B Importin subunit alpha- 35.0 1.6E+02 0.0054 28.5 9.4 88 19-106 101-202 (510)
152 1qgr_A Protein (importin beta 32.6 90 0.0031 31.5 7.3 108 15-122 603-726 (876)
153 1oyz_A Hypothetical protein YI 32.3 48 0.0017 28.8 4.7 58 17-80 127-187 (280)
154 2qk1_A Protein STU2; STU2P, XM 31.9 64 0.0022 28.6 5.5 63 16-78 144-217 (249)
155 2cy5_A Epidermal growth factor 30.6 2.4E+02 0.0081 23.6 11.2 87 226-318 41-134 (140)
156 1b3u_A Protein (protein phosph 30.5 1.8E+02 0.006 27.6 8.7 61 20-80 12-76 (588)
157 1qgr_A Protein (importin beta 30.3 2.6E+02 0.0089 28.1 10.4 66 15-80 405-478 (876)
158 3iqt_A Signal transduction his 29.2 95 0.0033 24.9 5.6 67 55-121 46-119 (123)
159 3tpo_A Importin subunit alpha- 28.9 2.4E+02 0.0081 27.3 9.5 87 19-105 120-220 (529)
160 1hyw_A GPW, head-TO-tail joini 28.2 62 0.0021 24.0 3.9 37 284-320 24-60 (68)
161 3myf_A Sensor protein; HPT, hi 26.0 1.7E+02 0.0059 23.1 6.6 68 55-122 37-111 (119)
162 1ibr_B P95, importin beta-1 su 25.8 3.2E+02 0.011 24.7 9.4 86 15-100 318-419 (462)
163 2bpt_A Importin beta-1 subunit 24.0 3.6E+02 0.012 26.9 10.0 65 15-79 408-480 (861)
164 3agt_A Hemerythrin-like domain 23.8 1.3E+02 0.0044 24.1 5.5 97 2-100 6-117 (136)
165 3k7d_A Glutamate-ammonia-ligas 23.2 1.2E+02 0.004 30.4 6.1 68 12-84 52-119 (498)
166 3o2t_A Symplekin; heat repeat, 22.5 1.2E+02 0.0042 29.4 5.9 86 36-124 45-132 (386)
167 3au4_A Myosin-X; protein-prote 22.3 5.2E+02 0.018 25.4 10.7 73 239-316 467-540 (555)
168 1u6g_C TIP120 protein, CAND1; 22.1 3.2E+02 0.011 29.3 9.6 116 13-128 43-173 (1230)
169 1b3u_A Protein (protein phosph 21.8 4.1E+02 0.014 25.0 9.5 69 11-79 80-153 (588)
170 2bpt_A Importin beta-1 subunit 21.6 1.8E+02 0.0062 29.2 7.2 86 15-100 594-691 (861)
171 2yf0_A Myotubularin-related pr 21.0 4.4E+02 0.015 26.5 9.8 68 243-313 30-98 (512)
172 1xqr_A HSPBP1 protein; armadil 20.3 2.6E+02 0.009 25.4 7.5 104 18-121 124-241 (296)
No 1
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.91 E-value=3.6e-24 Score=196.16 Aligned_cols=135 Identities=21% Similarity=0.414 Sum_probs=113.0
Q ss_pred hhcCccccccccccCCCCCCcceeeeccCCcccccccCCC-CceEEEEeccccCCCc--ccCCceeEEEEEeCCeeE-Ee
Q psy17028 177 RHSGFCDVFEYGVSGGGKEASWGCFLCNHPERAVGFLQDS-HPVIEGQLKEKKGRWK--IFKRWRTRYFTLSGAHLS-YK 252 (334)
Q Consensus 177 ~~~~~f~~f~~~~~~~g~~~~w~c~~c~~pe~a~~~~~~g-~vlkeGwLkkK~G~~~--~~K~WKrRwFVL~~~~L~-Yk 252 (334)
.-.+||+.|.+++ ||.++.|..+||.+.+.+..+++.. .++++|||.|+++..+ ..++||+|||||+++.|. |+
T Consensus 18 ~~~~~~~g~l~~~--~~~~~~w~~rw~vl~~~~~~~~~~~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk 95 (228)
T 3tfm_A 18 PGSPYFHSFLYMN--GGLMNSWKRRWCVLKDETFLWFRSKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFE 95 (228)
T ss_dssp ---CCEEEEEEEC--CTTTCCCEEEEEEEETTEEEEESSCCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEES
T ss_pred CCCCceEEEEeec--CcccccceEEEEEEeCCEEEEeccCCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEe
Confidence 4568999999999 8999999999999999999888876 7999999954443211 128999999999999998 45
Q ss_pred cCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 253 GSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 253 ~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
++.+..+.|.|+|..++.|.... .++++|+|.|++|+|+|+|+|++|+++||++|+.++..
T Consensus 96 ~~~~~~~~g~I~L~~~~~v~~~~---~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 96 NDSEEKLKGTVEVRSAKEIIDNT---NKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp STTCCSEEEEEEGGGCSEEEEET---TTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCCCcceeEEEEcCCCEEeccCC---CCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 55666899999999988765422 45789999999999999999999999999999999973
No 2
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=8.7e-23 Score=164.40 Aligned_cols=101 Identities=19% Similarity=0.297 Sum_probs=85.0
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCCeEE
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDSL 293 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RTy 293 (334)
.+.++++|||. |+|.. +++||+|||||+++.|+| +++.+..+.|.|+|..++.|....+...++++|.|.|++++|
T Consensus 5 ~~~~~~~G~L~-K~~~~--~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~ 81 (115)
T 2dn6_A 5 SSGVLKQGYMM-KKGHR--RKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTF 81 (115)
T ss_dssp CCSCSEEEEEE-EECTT--SSCEEEEEEEECSSCEEEESSTTCSSEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEE
T ss_pred CCCceEEEEEE-ecCCC--CCCcEEeEEEEECCEEEEeCCCCCcccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEE
Confidence 34789999994 55544 699999999999999985 555667899999999987777644444667899999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHhhc
Q psy17028 294 ILKPKNGKNAEQWVQCLSVVVAHSQ 318 (334)
Q Consensus 294 ~L~AdS~ee~~eWI~AI~~aIa~~~ 318 (334)
+|+|+|++|+++||.+|+.++...+
T Consensus 82 ~l~a~s~~e~~~Wi~ai~~~~~~~~ 106 (115)
T 2dn6_A 82 EISASDKKKKQEWIQAIHSTIHLLK 106 (115)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998643
No 3
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.89 E-value=1.1e-22 Score=164.21 Aligned_cols=101 Identities=17% Similarity=0.286 Sum_probs=84.1
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCC-eEE
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD-DSL 293 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~-RTy 293 (334)
+.++++|||. |+|.. +++||+|||||+++.|+ |+++.+..+.|.|+|..++.+.+..+..+++++|+|.|++ ++|
T Consensus 3 ~~~~~~G~L~-K~g~~--~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~ 79 (113)
T 1pls_A 3 PKRIREGYLV-KKGSV--FNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDH 79 (113)
T ss_dssp CCCSEEEEEE-EESSS--SSCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEE
T ss_pred CCCcEEEEEE-EeCCC--CCCceEEEEEEECCEEEEEeCCCCCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEE
Confidence 4689999994 55554 69999999999999998 4555667899999999998765333444678899999987 899
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHhhcc
Q psy17028 294 ILKPKNGKNAEQWVQCLSVVVAHSQA 319 (334)
Q Consensus 294 ~L~AdS~ee~~eWI~AI~~aIa~~~~ 319 (334)
+|+|+|++|+++||.+|+.++.....
T Consensus 80 ~l~a~s~~e~~~Wi~ai~~~~~~~~~ 105 (113)
T 1pls_A 80 FFQAAFLEERDAWVRDINKAIKCIEG 105 (113)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHHHTT
T ss_pred EEECCCHHHHHHHHHHHHHHHhccch
Confidence 99999999999999999999987433
No 4
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.89 E-value=1.1e-22 Score=176.43 Aligned_cols=99 Identities=17% Similarity=0.249 Sum_probs=81.5
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCCeEE
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDSL 293 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RTy 293 (334)
+..++++|||.| +|.. +|+||+|||||+++.|+ |+++.+..+.|.|+|..++.+........++++|+|.|++|+|
T Consensus 15 ~~pv~keG~L~K-kg~~--~k~WkrRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~ 91 (149)
T 1x1f_A 15 ALPLYFEGFLLI-KRSG--YREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEV 91 (149)
T ss_dssp SSCEEEEEEEEE-ECTT--CCSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCE
T ss_pred CCCccEEEEEEE-eCCC--CCCceeEEEEEcCCEEEEEeCCCccccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEE
Confidence 335899999955 4444 69999999999999998 5666677889999999987664322222346899999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 294 ILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 294 ~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
+|+|+|++|+++||+||+.++..
T Consensus 92 ~f~A~s~ee~~eWi~aI~~v~~~ 114 (149)
T 1x1f_A 92 QLKTENTESGEEWRGFILTVTEL 114 (149)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHS
T ss_pred EEEcCCHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999875
No 5
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.89 E-value=8.6e-23 Score=173.02 Aligned_cols=106 Identities=21% Similarity=0.364 Sum_probs=84.9
Q ss_pred CCCCceEEEEeccccCC-CcccCCceeEEEEEeCCeeE-Ee----cCCCCCccceEEcCCeeEEEe---cCCCCCCCceE
Q psy17028 214 QDSHPVIEGQLKEKKGR-WKIFKRWRTRYFTLSGAHLS-YK----GSKEDKQETPIDVHRIRSVKV---SRGARNIPKAF 284 (334)
Q Consensus 214 ~~g~vlkeGwLkkK~G~-~~~~K~WKrRwFVL~~~~L~-Yk----~~~~~~p~g~I~L~~~~sV~~---~~~~~~k~~~F 284 (334)
++.++.++||| .|+|+ . +|+||||||||+++.|+ |+ ++++.+|.|.|+|.+++ |+. ..+..+++++|
T Consensus 4 ~p~n~~~~G~L-~KqG~~~--~K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g~t-V~~~~~~~~~~~~k~~F 79 (126)
T 1wi1_A 4 GSSGMKHSGYL-WAIGKNV--WKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYT-VDYTDPQPGLEGGRAFF 79 (126)
T ss_dssp CCCCEEEEEEE-EEECSSS--CCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSSCE-EEECCCCSSCCSCSSEE
T ss_pred CCCCCceeEEE-EEeCCCc--ccccceEEEEEeCCEEEEEEcccccccCCCCceEEECCCcE-EEEecCCcccccCceEE
Confidence 34468999999 55554 3 59999999999999998 55 66777899999999974 542 22224567999
Q ss_pred EEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhccccCCC
Q psy17028 285 EIFTGDDSLILKPKNGKNAEQWVQCLSVVVAHSQAKEMPT 324 (334)
Q Consensus 285 ~I~T~~RTy~L~AdS~ee~~eWI~AI~~aIa~~~~ke~~~ 324 (334)
+|++++++|+|+|||++||++||+||+.|+.++ .++.|.
T Consensus 80 ~~v~~~~ty~~~Adseee~~~WikAi~~A~~~~-~~~~~~ 118 (126)
T 1wi1_A 80 NAVKEGDTVIFASDDEQDRILWVQAMYRATGQS-HKPVPP 118 (126)
T ss_dssp EEECSSCEEEEECSSHHHHHHHHHHHHHHHTCS-SCCCCC
T ss_pred EEecCCceEEEEcCCHHHHHHHHHHHHHHhccc-cCCCCC
Confidence 999999999999999999999999999998764 344443
No 6
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.88 E-value=3.9e-22 Score=163.92 Aligned_cols=100 Identities=25% Similarity=0.413 Sum_probs=84.2
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCCeEE
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDSL 293 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RTy 293 (334)
+..++++|||. |+|.. .++||+|||||+++.|+| +++.+..|.|.|+|..+..|..... .+++++|.|.|++++|
T Consensus 15 ~~~~~~~G~L~-K~g~~--~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~-~~~~~~F~i~~~~r~~ 90 (126)
T 1fao_A 15 PSLGTKEGYLT-KQGGL--VKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYS-QERVNCFCLVFPFRTF 90 (126)
T ss_dssp CCTTCEEEEEE-EECSS--SCCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECS-SSSSSEEEEEETTEEE
T ss_pred CCCccEEEEEE-EcCCC--CCCcccEEEEEECCEEEEeCCCCCCCceeEEEccceEEEEeccc-CCCCCEEEEEeCCcEE
Confidence 34689999995 45544 699999999999999985 5556678999999999987776432 3567999999999999
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHhhc
Q psy17028 294 ILKPKNGKNAEQWVQCLSVVVAHSQ 318 (334)
Q Consensus 294 ~L~AdS~ee~~eWI~AI~~aIa~~~ 318 (334)
+|+|+|++|+++||.+|+.+|...+
T Consensus 91 ~l~a~s~~e~~~Wi~al~~~i~~~~ 115 (126)
T 1fao_A 91 YLCAKTGVEADEWIKILRWKLSQIR 115 (126)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHTC-
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998743
No 7
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.88 E-value=1.2e-21 Score=158.80 Aligned_cols=95 Identities=20% Similarity=0.366 Sum_probs=80.6
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCCeEEE
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDSLI 294 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RTy~ 294 (334)
..++++|||.|+++.. .++||+|||||+++.|+ |+++.+..+.|.|+|..++.|...+ +++|.|.|++|+|+
T Consensus 6 ~~~~~~G~L~K~~~~~--~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~-----~~~F~i~~~~r~~~ 78 (115)
T 2cod_A 6 SGKVKSGWLDKLSPQG--KRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG-----DNKFEVVTTQRTFV 78 (115)
T ss_dssp SCCCEEEEEEECCSSS--SSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEEET-----TTEEEEEESSCCEE
T ss_pred CCccEEEEEEEcCCCC--CCCCceEEEEEECCEEEEEcCCCCcccCCEEECCcceEEEeCC-----CCEEEEEeCCcEEE
Confidence 3689999995444424 69999999999999998 5556666899999999998776532 58999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 295 LKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 295 L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
|+|+|++|+++||.+|+.++...
T Consensus 79 l~a~s~~e~~~Wi~~l~~~~~~~ 101 (115)
T 2cod_A 79 FRVEKEEERNDWISILLNALKSQ 101 (115)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999998543
No 8
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.87 E-value=8.3e-22 Score=158.35 Aligned_cols=100 Identities=14% Similarity=0.268 Sum_probs=82.5
Q ss_pred CCCCceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCC-e
Q psy17028 214 QDSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD-D 291 (334)
Q Consensus 214 ~~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~-R 291 (334)
.++.++++|||.|| |.. +++||+|||||+++.|+ |+++.+..|.+.|+|..+..+...+ ...++++|.|.+++ +
T Consensus 4 ~~~~~~~~G~L~K~-~~~--~~~Wk~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~-~~~~~~~F~i~~~~~~ 79 (109)
T 1wgq_A 4 GSSGSTMSGYLYRS-KGS--KKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKD-ENSESKVFQLLHKGMV 79 (109)
T ss_dssp CCCSCSCEEEEEEE-SST--TSCCEEEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCC-SSCSSSEEEEEETTEE
T ss_pred CCCCCeEEEEEEeC-CCC--CCCceeEEEEEeCCEEEEECCCCcCccCceEECCCCEEEECCC-CCCCCcEEEEEeCCCe
Confidence 44578999999554 444 69999999999999998 5556667899999999998776543 23457899999886 6
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 292 SLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 292 Ty~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
+|+|+|+|++|+++||.+|+.++..+
T Consensus 80 ~~~~~a~s~~e~~~Wi~al~~a~~~~ 105 (109)
T 1wgq_A 80 FYVFKADDAHSTQRWIDAFQEGTVSG 105 (109)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCHHHHHHHHHHHHHHhccC
Confidence 89999999999999999999997654
No 9
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.87 E-value=4.1e-22 Score=162.67 Aligned_cols=104 Identities=21% Similarity=0.408 Sum_probs=84.3
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecCCCCCccceEEcCCeeEEEecCC--CCCCCceEEEEeCCe
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGSKEDKQETPIDVHRIRSVKVSRG--ARNIPKAFEIFTGDD 291 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~~~~~p~g~I~L~~~~sV~~~~~--~~~k~~~F~I~T~~R 291 (334)
+..++++|||. |+|.. +++||+|||||+++.|+| +++.+..+.|.|+|..+..|..... ...++++|.|.|++|
T Consensus 11 ~~~~~~~G~L~-K~g~~--~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r 87 (125)
T 1eaz_A 11 DSAVIKAGYCV-KQGAV--MKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSR 87 (125)
T ss_dssp -CCCSEEEEEE-EECTT--TCCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSC
T ss_pred CCCccEEEEEE-EeCCC--CCCcceEEEEEeCCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEeCCc
Confidence 44789999995 55554 699999999999999984 5566678999999999987765321 124578999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHhhcccc
Q psy17028 292 SLILKPKNGKNAEQWVQCLSVVVAHSQAKE 321 (334)
Q Consensus 292 Ty~L~AdS~ee~~eWI~AI~~aIa~~~~ke 321 (334)
+|+|+|+|++|+++||.+|+.++...+...
T Consensus 88 ~~~l~a~s~~e~~~W~~al~~~i~~~~~~~ 117 (125)
T 1eaz_A 88 TFYVQADSPEEMHSWIKAVSGAIVAQRGPG 117 (125)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHHTC---
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999999999999998754433
No 10
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.87 E-value=4.2e-22 Score=160.86 Aligned_cols=100 Identities=23% Similarity=0.398 Sum_probs=82.1
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEe--CCeeEE-ecCCCCCccceEEcCCeeEEEecCC------CCCCCceEE
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLS--GAHLSY-KGSKEDKQETPIDVHRIRSVKVSRG------ARNIPKAFE 285 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~--~~~L~Y-k~~~~~~p~g~I~L~~~~sV~~~~~------~~~k~~~F~ 285 (334)
++.++++|||. |+|.. +++||+|||||+ ++.|+| +++.+..|.|.|+|..++.|..... ...++++|.
T Consensus 5 ~~~~~~~G~L~-K~g~~--~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~ 81 (117)
T 1v5u_A 5 SSGRSYEGILY-KKGAF--MKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFD 81 (117)
T ss_dssp CCSSSEEEEEE-ECCCS--SSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEE
T ss_pred cCCccEEEEEE-ecCCC--CCCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEE
Confidence 45789999994 55544 699999999999 789985 5556678999999999988875331 124458999
Q ss_pred EEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 286 IFTGDDSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 286 I~T~~RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
|.|++|+|+|+|+|++|+++||++|+.++..+
T Consensus 82 i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 113 (117)
T 1v5u_A 82 VKTTRRVYNFCAQDVPSAQQWVDRIQSCLSSG 113 (117)
T ss_dssp EEESSCEEEEECSSHHHHHHHHHHHHTTCCCC
T ss_pred EECCCceEEEECCCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999987653
No 11
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.87 E-value=1.5e-21 Score=157.16 Aligned_cols=99 Identities=27% Similarity=0.464 Sum_probs=82.3
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCC-CCCCCceEEEEe-----
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRG-ARNIPKAFEIFT----- 288 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~-~~~k~~~F~I~T----- 288 (334)
+.++++|||.| +|.. +++||+|||||+++.|+ |+++.+..|.|.|+|..++.+.+... ...++++|+|.+
T Consensus 6 ~~~~~~G~L~K-~g~~--~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~ 82 (118)
T 1v89_A 6 SGPIKMGWLKK-QRSI--VKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQ 82 (118)
T ss_dssp SCEEEEEEEEE-ECSS--SSCEEEEEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSS
T ss_pred CCCcEEEEEEe-cCCC--CCCccEEEEEEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCcccc
Confidence 47899999954 4544 69999999999999998 55566678999999999876655332 235678999998
Q ss_pred ---CCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 289 ---GDDSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 289 ---~~RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
++++|+|+|+|++|+++||.+|+.++..+
T Consensus 83 ~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 114 (118)
T 1v89_A 83 NRMGQDSYVLMASSQAEMEEWVKFLRRVAGSG 114 (118)
T ss_dssp CCSSCCCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred ccCCCcEEEEECCCHHHHHHHHHHHHHHHccC
Confidence 77899999999999999999999998764
No 12
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.87 E-value=6.3e-22 Score=156.76 Aligned_cols=101 Identities=17% Similarity=0.343 Sum_probs=81.2
Q ss_pred CCceEEEEeccccCCCccc-CCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEec--CCCCCCCceEEEEeCC-
Q psy17028 216 SHPVIEGQLKEKKGRWKIF-KRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVS--RGARNIPKAFEIFTGD- 290 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~-K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~--~~~~~k~~~F~I~T~~- 290 (334)
|.++++|||.+|+++.+.+ ++|++|||||+++.|+ |+++.+..|.|.|+|..++.+... ..+.+++++|.|.+++
T Consensus 1 g~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~ 80 (108)
T 1u5d_A 1 GSVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDR 80 (108)
T ss_dssp CCEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSS
T ss_pred CCccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCCCCCCEEEEecceEEEeCCccccccCCcceEEEEcCCC
Confidence 4689999996555432223 8999999999999998 555666789999999998744332 1223567899999998
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 291 DSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 291 RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
++|+|+|+|++|+++||.+|+.+++.
T Consensus 81 r~~~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 81 RTYEFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999875
No 13
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.87 E-value=1e-21 Score=166.11 Aligned_cols=97 Identities=18% Similarity=0.313 Sum_probs=79.1
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCC---
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD--- 290 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~--- 290 (334)
++.++++||| .|+| . +|+||+|||||+++.|+ |+++++..|.|.|+|.+++.++. ....++++|+|.+++
T Consensus 5 ~~~v~k~GwL-~K~g-~--~k~WkrRWfVLk~~~L~yyk~~~~~~p~G~I~L~~~~v~~~--~~~~~~~~F~i~~~~~~~ 78 (130)
T 1v88_A 5 SSGIVMADWL-KIRG-T--LKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIER--PSKKDGFCFKLFHPLEQS 78 (130)
T ss_dssp SSSCCEEEEE-EECC-S--SSSCEEEEEEEETTEEEEESCSSSCCCCEEEECSSCEECCC--CTTTSSCEEEEECTTCCC
T ss_pred CCceEEEeEE-EEeC-C--CCCceEEEEEEECCEEEEECCCCCCCceEEEEcCCCEEEEC--CCCCCCeEEEEEcCCccc
Confidence 3478999999 5677 3 69999999999999998 56667778999999999864322 223456899999764
Q ss_pred ---------------------eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 291 ---------------------DSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 291 ---------------------RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
++|+|+|+|++|+++||.||+.|+...
T Consensus 79 i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~~ 126 (130)
T 1v88_A 79 IWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKSG 126 (130)
T ss_dssp CSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTTT
T ss_pred cccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 349999999999999999999998653
No 14
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.86 E-value=1e-21 Score=154.17 Aligned_cols=89 Identities=19% Similarity=0.279 Sum_probs=73.5
Q ss_pred ceEEEEeccccCCCcccCCceeEEEEEeCCeeEEec-CCC--CCccceEEcCCeeEEEecCCCCCCCceEEEEeCCeEEE
Q psy17028 218 PVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKG-SKE--DKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDSLI 294 (334)
Q Consensus 218 vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~-~~~--~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RTy~ 294 (334)
|.++||| .|+|+. +|+||+|||||+++.|.|+. +.+ ..|.|.|+|..+..+.. . ..+++|.|.+++|+|+
T Consensus 1 V~k~G~L-~K~g~~--~k~WkkR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~~~-~---~~~~~F~i~~~~r~~~ 73 (94)
T 2rsg_A 1 VERCGVL-SKWTNY--IHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPH-D---FDECRFDISVNDSVWY 73 (94)
T ss_dssp CCEEEEE-EEESSS--TTCEEEEEEEEETTEEEEESSTTGGGTCCSEEEETTTCEEEEC-S---SCSSEEEEEETTEEEE
T ss_pred CCEEEEE-EEeCCC--CCCceEEEEEEECCEEEEEEecccccccceeeEecceeeeecC-c---ccceeEEEEeCCeEEE
Confidence 5799999 566665 79999999999999998554 332 35889999998754422 2 3468999999999999
Q ss_pred EEcCCHHHHHHHHHHHHHH
Q psy17028 295 LKPKNGKNAEQWVQCLSVV 313 (334)
Q Consensus 295 L~AdS~ee~~eWI~AI~~a 313 (334)
|+|+|++|+++||+||+.|
T Consensus 74 l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 74 LRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp EECCSSCCTHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHhh
Confidence 9999999999999999986
No 15
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.86 E-value=3.1e-21 Score=157.58 Aligned_cols=98 Identities=19% Similarity=0.410 Sum_probs=80.7
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCC-----
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD----- 290 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~----- 290 (334)
+++++|||.| +|.. +++||+|||||+++.|+| +++.+..|.|.|+|..++.+.+.+ .+++++|.|.+++
T Consensus 4 ~~~~~G~L~K-~g~~--~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~--~~~~~~f~i~~~~~~~~~ 78 (127)
T 1fgy_A 4 NPDREGWLLK-LGGR--VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVLD--PRKPNCFELYNPSHKGQV 78 (127)
T ss_dssp SCSEEEEEEE-ECSS--SCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECC--SSCSSEEEEECSSSTTCC
T ss_pred CCceEeEEEE-ECCC--CCCeEEEEEEEECCEEEEeCCCCCCCcceEEECCceEEEEccC--CCCCceEEEecCCccccc
Confidence 5799999955 4544 699999999999999985 455667899999999986544432 3567899998764
Q ss_pred -----------------eEEEEEcCCHHHHHHHHHHHHHHHHhhcc
Q psy17028 291 -----------------DSLILKPKNGKNAEQWVQCLSVVVAHSQA 319 (334)
Q Consensus 291 -----------------RTy~L~AdS~ee~~eWI~AI~~aIa~~~~ 319 (334)
|+|+|+|+|++|+++||.+|+.++...+.
T Consensus 79 ~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 124 (127)
T 1fgy_A 79 IKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPF 124 (127)
T ss_dssp CCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHCTT
T ss_pred cccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccCCc
Confidence 79999999999999999999999987654
No 16
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.86 E-value=2.5e-21 Score=157.82 Aligned_cols=107 Identities=19% Similarity=0.269 Sum_probs=79.7
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecC-CCCCCCceEEEEeCC-eEE
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSR-GARNIPKAFEIFTGD-DSL 293 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~-~~~~k~~~F~I~T~~-RTy 293 (334)
.++++|||.|+++.. +++|++|||||+++.|+ |+++.+..+.|.|+|..++...... ...+++++|.|.+++ ++|
T Consensus 10 ~~~~~G~L~K~~~~~--~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~ 87 (123)
T 1upq_A 10 PVHIRGWLHKQDSSG--LRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTY 87 (123)
T ss_dssp CEEEEEEEEEECSSS--SCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCE
T ss_pred CceEEEEEEeeCCCC--CCCceeEEEEEeCCEEEEECCCCCcccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEE
Confidence 478999996555444 69999999999999998 5556667899999999975333322 223568999999987 999
Q ss_pred EEEcCCHHHHHHHHHHHHHHHHhhccccCCCC
Q psy17028 294 ILKPKNGKNAEQWVQCLSVVVAHSQAKEMPTR 325 (334)
Q Consensus 294 ~L~AdS~ee~~eWI~AI~~aIa~~~~ke~~~R 325 (334)
+|+|+|++|+++||.+|+.++..........|
T Consensus 88 ~l~a~s~~e~~~Wi~al~~a~~~~~~~~~~~r 119 (123)
T 1upq_A 88 VLAADTLEDLRGWLRALGRASRAEGDDYGQPR 119 (123)
T ss_dssp EEECSSHHHHHHHHHHHHHHHC----------
T ss_pred EEECCCHHHHHHHHHHHHHHHhcccCCCCCCC
Confidence 99999999999999999999876433333333
No 17
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.86 E-value=2.8e-21 Score=168.71 Aligned_cols=104 Identities=17% Similarity=0.323 Sum_probs=82.5
Q ss_pred CceEEEEeccccCCCc--ccCCceeEEEEEeCCeeEEec-CC-CCCccceEEcCCeeEEEecCCC-----CCCCceEEEE
Q psy17028 217 HPVIEGQLKEKKGRWK--IFKRWRTRYFTLSGAHLSYKG-SK-EDKQETPIDVHRIRSVKVSRGA-----RNIPKAFEIF 287 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~--~~K~WKrRwFVL~~~~L~Yk~-~~-~~~p~g~I~L~~~~sV~~~~~~-----~~k~~~F~I~ 287 (334)
.+++||||.||+...+ ..|+||+|||||+++.|+|++ +. ...+.|.|+|..+..|+....+ ....++|.|.
T Consensus 14 ~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~ 93 (164)
T 2lul_A 14 NTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVV 93 (164)
T ss_dssp SEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEE
T ss_pred CeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcccccccEEEEeeeEEEEeccccccCcccccceeEEEe
Confidence 7999999955433222 247899999999999998554 33 3458899999998888753322 2356899999
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHHHHHHhhccc
Q psy17028 288 TGDDSLILKPKNGKNAEQWVQCLSVVVAHSQAK 320 (334)
Q Consensus 288 T~~RTy~L~AdS~ee~~eWI~AI~~aIa~~~~k 320 (334)
|++|+|+|+|+|++|+++||+||+.+|..++..
T Consensus 94 t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~~~ 126 (164)
T 2lul_A 94 HDANTLYIFAPSPQSRDLWVKKLKEEIKNNNNI 126 (164)
T ss_dssp CSSCEEEEECSSHHHHHHHHHHHHHHHTTCSCC
T ss_pred cCCcEEEEECCCHHHHHHHHHHHHHHHHHChhh
Confidence 999999999999999999999999999876543
No 18
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=2.8e-21 Score=158.75 Aligned_cols=98 Identities=21% Similarity=0.261 Sum_probs=79.9
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCC--eeEE-ecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCCeE
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGA--HLSY-KGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDS 292 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~--~L~Y-k~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RT 292 (334)
..++++|||. |+|....+++||+|||||+++ .|+| +++.+..|.|.|+|..++.+... ...+++|.|.|++|+
T Consensus 6 ~~~~~~G~L~-K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~~---~~~~~~F~i~~~~r~ 81 (119)
T 2dhk_A 6 SGKKLCGYLS-KFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCKA---DAEEGIFEIKTPSRV 81 (119)
T ss_dssp SCCCCEEEEE-ECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEECT---TGGGCEEEEECSSCC
T ss_pred CCCcEEEEEE-ecCCCCCCCCceeEEEEEECCccEEEEECCCCCcccccEEECCCCEEEecC---CCCCCEEEEEeCCcE
Confidence 3678999995 444311279999999999999 8985 44566689999999998766431 234689999999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 293 LILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 293 y~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
|+|+|+|++|+++||++|+.++...
T Consensus 82 ~~l~a~s~~e~~~Wi~al~~~~~~~ 106 (119)
T 2dhk_A 82 ITLKAATKQAMLYWLQQLQMKRWEF 106 (119)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998654
No 19
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.86 E-value=1.9e-21 Score=163.45 Aligned_cols=99 Identities=19% Similarity=0.290 Sum_probs=78.5
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEe---CCeeEEe-c----CCCCCccceEEcCCeeEEEecC--CCCCCCceEE
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLS---GAHLSYK-G----SKEDKQETPIDVHRIRSVKVSR--GARNIPKAFE 285 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~---~~~L~Yk-~----~~~~~p~g~I~L~~~~sV~~~~--~~~~k~~~F~ 285 (334)
.+..++|||.|+++.. +|+||||||||+ ++.|+|+ + +.+.+|.|.|+|..+..|.... ...+.+++|.
T Consensus 13 ~~~~~~G~L~K~g~~~--~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~ 90 (126)
T 1v5p_A 13 RQNRICGFLDIEDNEN--SGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFV 90 (126)
T ss_dssp CCCCEECCEEEECTTC--SSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEE
T ss_pred CCCceEEEEEEeCCCC--CCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEEE
Confidence 3557899995544344 699999999999 4455664 4 3466899999999988887543 2224568999
Q ss_pred EEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 286 IFTGDDSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 286 I~T~~RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
|.|++|+|+|+|+|++|+++||+||+.|+..
T Consensus 91 i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~~ 121 (126)
T 1v5p_A 91 INALSQRYFLQANDQKDLKDWVEALNQASKS 121 (126)
T ss_dssp EECSSCEEEEECSSHHHHHHHHHHHHHTTTT
T ss_pred EECCCEEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998654
No 20
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.86 E-value=5.6e-21 Score=152.38 Aligned_cols=96 Identities=21% Similarity=0.367 Sum_probs=76.8
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCC--eeEE-ecCCCCCccceEEcCCeeEEEecCC----CCCCCceEEEEe
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGA--HLSY-KGSKEDKQETPIDVHRIRSVKVSRG----ARNIPKAFEIFT 288 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~--~L~Y-k~~~~~~p~g~I~L~~~~sV~~~~~----~~~k~~~F~I~T 288 (334)
+.++++|||.| +|.. +++|++|||||+++ .|+| +++.+..|.|.|+|..++.+.+... ..+++++|.|.|
T Consensus 5 ~~~~~~G~L~K-~g~~--~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~ 81 (109)
T 2i5f_A 5 GVIIKQGCLLK-QGHR--RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIIT 81 (109)
T ss_dssp CCEEEEEEEEE-ECTT--TCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEEC
T ss_pred CceeEEEEEEE-cCCC--CCCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEe
Confidence 47899999954 5544 69999999999987 8875 4556678999999999765554322 113678999999
Q ss_pred CC-eEEEEEcCCHHHHHHHHHHHHHHH
Q psy17028 289 GD-DSLILKPKNGKNAEQWVQCLSVVV 314 (334)
Q Consensus 289 ~~-RTy~L~AdS~ee~~eWI~AI~~aI 314 (334)
++ ++|+|+|+|++|+++||.+|+.++
T Consensus 82 ~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 82 ADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp TTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 97 579999999999999999999986
No 21
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.85 E-value=5.5e-21 Score=157.61 Aligned_cols=98 Identities=21% Similarity=0.355 Sum_probs=79.4
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCC--eeEEe-cCCCCCccceEEcCCeeEEEecCC----CCCCCceEEEEe
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGA--HLSYK-GSKEDKQETPIDVHRIRSVKVSRG----ARNIPKAFEIFT 288 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~--~L~Yk-~~~~~~p~g~I~L~~~~sV~~~~~----~~~k~~~F~I~T 288 (334)
+.++++|||. |+|.. .++||+|||||+++ .|+|+ ++.+..|.|.|+|..++.+.+... ..+++++|.|.|
T Consensus 16 ~~~~~~G~L~-K~g~~--~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~ 92 (129)
T 1x05_A 16 GVIIKQGCLL-KQGHR--RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIIT 92 (129)
T ss_dssp SEEEEEEEEE-ECCSS--CCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEEC
T ss_pred CCceEEEEEE-ecCCC--CCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccCCEEEEccCCccccccCCCeEEEEEc
Confidence 4789999994 55554 69999999999986 78754 556678999999999865544322 113679999999
Q ss_pred CC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 289 GD-DSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 289 ~~-RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
++ ++|+|+|+|++|+++||.+|+.++..
T Consensus 93 ~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 93 ADEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp TTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 86 67999999999999999999999875
No 22
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.85 E-value=4.2e-21 Score=161.04 Aligned_cols=101 Identities=19% Similarity=0.337 Sum_probs=80.2
Q ss_pred CCCceEEEEeccc----cCCCcccCCceeEEEEEeCCeeE-EecCC-----------CCCccceEEcCCeeEEEecCCCC
Q psy17028 215 DSHPVIEGQLKEK----KGRWKIFKRWRTRYFTLSGAHLS-YKGSK-----------EDKQETPIDVHRIRSVKVSRGAR 278 (334)
Q Consensus 215 ~g~vlkeGwLkkK----~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~-----------~~~p~g~I~L~~~~sV~~~~~~~ 278 (334)
+..+.++|||.+| +|+. ..|+|++|||||+++.|+ |++++ +..|.|.|+|.+++. ....+..
T Consensus 9 ~~~~~k~G~L~kk~~~~~G~~-~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v-~~~~~~~ 86 (129)
T 2p0d_A 9 SHEVEKSGLLNMTKIAQGGRK-LRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAAL-AHGRHLS 86 (129)
T ss_dssp CCSEEEEEEEEEEEEEETTEE-CCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEE-EECTTSC
T ss_pred CcceeEEEEEEEeeeccCCCc-CCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEE-EECCCCC
Confidence 3478999999654 4532 249999999999999998 55552 447999999999864 4334444
Q ss_pred CCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 279 NIPKAFEIFTGD-DSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 279 ~k~~~F~I~T~~-RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
+++++|+|.|++ ++|+|+|+|++||++||++|+.+|...
T Consensus 87 kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 87 SRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp SSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 678999999987 689999999999999999999999764
No 23
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=9.4e-21 Score=158.31 Aligned_cols=99 Identities=21% Similarity=0.361 Sum_probs=77.5
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEE-eCCeeEEe-cCCCCCccceEEcCC-eeEEEec--------CCCCCCCce
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTL-SGAHLSYK-GSKEDKQETPIDVHR-IRSVKVS--------RGARNIPKA 283 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL-~~~~L~Yk-~~~~~~p~g~I~L~~-~~sV~~~--------~~~~~k~~~ 283 (334)
.+.++++||| .|+|.. +|+||+||||| +++.|+|+ ++.+..+.|.|.++. +..|... .+...++++
T Consensus 5 ~~~v~~~G~L-~K~g~~--~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~ 81 (130)
T 2d9v_A 5 SSGLVRGGWL-WRQSSI--LRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGL 81 (130)
T ss_dssp CCCEEEEEEE-EEECSS--SCCEEEEEEEEETTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTE
T ss_pred CCceeEEEEE-EeecCc--cCCceeeEEEEccCCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCCCCCcCcE
Confidence 3478999999 555655 79999999999 79999854 455567889998874 4444421 122356789
Q ss_pred EEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 284 FEIFTGD-DSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 284 F~I~T~~-RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
|+|.|++ |+|+|+|+|++|+++||+||+.++..
T Consensus 82 F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~ 115 (130)
T 2d9v_A 82 LTVNLREGSRLHLCAETRDDAIAWKTALMEANST 115 (130)
T ss_dssp EEEEETTSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 9999965 89999999999999999999999864
No 24
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.85 E-value=5e-21 Score=156.73 Aligned_cols=97 Identities=21% Similarity=0.360 Sum_probs=77.3
Q ss_pred EEEEeccccCC-CcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCee-E-EEecCCCCCCCceEEEEeC-CeEEE
Q psy17028 220 IEGQLKEKKGR-WKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIR-S-VKVSRGARNIPKAFEIFTG-DDSLI 294 (334)
Q Consensus 220 keGwLkkK~G~-~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~-s-V~~~~~~~~k~~~F~I~T~-~RTy~ 294 (334)
+||||.+|+|. ....++||+|||||+++.|+ |+++++..|.+.|+|.... . +.. .+..+++++|+|.++ .++|+
T Consensus 2 keG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~~~p~~~i~l~~~~~~~~~~-~~~~~r~~~F~l~~~~~~~y~ 80 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGGCRR-ANTTDRPHAFQVILSDRPCLE 80 (112)
T ss_dssp EEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSCCSCSEEEETTC-CEEEEEE-CCCSSCTTEEEEEETTSCCEE
T ss_pred ceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCCCCccceEEecCCEEEeeec-cCCCCCCeEEEEEcCCCCEEE
Confidence 79999766553 21369999999999999998 6777777899999998653 2 222 334567899999976 57999
Q ss_pred EEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 295 LKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 295 L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
|+|+|++||++||++|+.++...
T Consensus 81 f~A~s~ee~~~Wi~ai~~~~~~~ 103 (112)
T 3cxb_B 81 LSAESEAEMAEWMQHLCQAVSKG 103 (112)
T ss_dssp EECSSHHHHHHHHHHHHHHHTCC
T ss_pred EEcCCHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999998653
No 25
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.85 E-value=1.9e-21 Score=170.97 Aligned_cols=102 Identities=18% Similarity=0.322 Sum_probs=80.1
Q ss_pred CceEEEEeccccCCCc--ccCCceeEEEEEeCCeeEE-ec----CCCCCccceEEcCCeeEEEec---CCC-CCC-----
Q psy17028 217 HPVIEGQLKEKKGRWK--IFKRWRTRYFTLSGAHLSY-KG----SKEDKQETPIDVHRIRSVKVS---RGA-RNI----- 280 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~--~~K~WKrRwFVL~~~~L~Y-k~----~~~~~p~g~I~L~~~~sV~~~---~~~-~~k----- 280 (334)
.++++|||.|++.+.+ .+++||+|||||+++.|.| ++ +.+.++.|.|+|..+..|+.. ++. ..+
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~ 81 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRR 81 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccc
Confidence 4789999955432211 2589999999999999985 54 345679999999998877754 211 111
Q ss_pred ----------------CceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q psy17028 281 ----------------PKAFEIFTGDDSLILKPKNGKNAEQWVQCLSVVVAHSQ 318 (334)
Q Consensus 281 ----------------~~~F~I~T~~RTy~L~AdS~ee~~eWI~AI~~aIa~~~ 318 (334)
+++|+|+|++|+|+|+|+|++|+++||++|+.++..++
T Consensus 82 ~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~~n~ 135 (169)
T 1btk_A 82 GEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRYNS 135 (169)
T ss_dssp ------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHTTCS
T ss_pred cCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHHCc
Confidence 27999999999999999999999999999999998654
No 26
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.6e-21 Score=160.01 Aligned_cols=101 Identities=19% Similarity=0.330 Sum_probs=79.8
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeC--CeeEEec-CCC--CCccceEEcCCeeEEEecCCCCCCCceEEEEeCC
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSG--AHLSYKG-SKE--DKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD 290 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~--~~L~Yk~-~~~--~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~ 290 (334)
+.++++|||. |+|+. +++||+|||||++ +.|+|++ +.+ ..|.|.|+|..++ |...+ ..+++|.|.|++
T Consensus 6 ~~~~~~G~L~-K~~~~--~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~-v~~~~---~~~~~F~i~~~~ 78 (120)
T 2d9x_A 6 SGENVYGYLM-KYTNL--VTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAV-ISPSD---EDSHTFTVNAAS 78 (120)
T ss_dssp SCCCCEEEEE-EEEET--TTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCC-EECCS---SSSSCEEECCSS
T ss_pred CCCcEEEEEE-ecCCC--CCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcceEE-EEecC---CCCCEEEEEcCC
Confidence 4688999995 45544 6999999999994 6887554 333 3789999999985 44422 346899999997
Q ss_pred -eEEEEEcCCHHHHHHHHHHHHHHHHhhccccCC
Q psy17028 291 -DSLILKPKNGKNAEQWVQCLSVVVAHSQAKEMP 323 (334)
Q Consensus 291 -RTy~L~AdS~ee~~eWI~AI~~aIa~~~~ke~~ 323 (334)
|+|+|+|+|++|+++||++|+.++.........
T Consensus 79 ~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~~~ 112 (120)
T 2d9x_A 79 GEQYKLRATDAKERQHWVSRLQICTQHHTEAIGK 112 (120)
T ss_dssp SCCEEECCSSHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 999999999999999999999999876554443
No 27
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.85 E-value=7.3e-21 Score=156.11 Aligned_cols=98 Identities=21% Similarity=0.315 Sum_probs=79.3
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecC-CCCCCCceEEEEeCC-eE
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSR-GARNIPKAFEIFTGD-DS 292 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~-~~~~k~~~F~I~T~~-RT 292 (334)
..++++|||.|+++.. +++||+|||||+++.|+ |+++.+..+.|.|+|..++...+.. +..+++++|.|.+++ ++
T Consensus 19 ~~~~~~G~L~K~~~~~--~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~ 96 (128)
T 2dkp_A 19 APVVRRGWLYKQDSTG--MKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRT 96 (128)
T ss_dssp SCCCEEEEEEEECCSS--SCCEEEEEEEEETTEEEEESSTTCCSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCC
T ss_pred CCcEEEEEEEEeCCCC--CCCceeEEEEEeCCEEEEECCCCCcccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCE
Confidence 3689999995555434 69999999999999998 5556667899999998875433322 223567899999986 99
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 293 LILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 293 y~L~AdS~ee~~eWI~AI~~aIa 315 (334)
|+|+|+|++|+++||++|+.|+.
T Consensus 97 ~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 97 YYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHS
T ss_pred EEEEcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999865
No 28
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.9e-20 Score=152.44 Aligned_cols=96 Identities=15% Similarity=0.293 Sum_probs=77.2
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCCeEEEEE
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDSLILK 296 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RTy~L~ 296 (334)
.++++|||.||++.. .++||+|||||+++.|+|+++++..+.+.|++..+. |.+.. .++++|+|.|++|+|+|+
T Consensus 9 ~~~~~G~L~K~~~~~--~k~WkkR~fvL~~~~L~yyk~~~~~~~~~i~l~~~~-v~~~~---~~~~~F~I~~~~r~~~l~ 82 (114)
T 2da0_A 9 GSEKKGYLLKKSDGI--RKVWQRRKCSVKNGILTISHATSNRQPAKLNLLTCQ-VKPNA---EDKKSFDLISHNRTYHFQ 82 (114)
T ss_dssp CSCEEEEEEEECSSS--CCCEEEEEEEEETTEEEECCSSCCSCCEEEETTTSE-EEECS---SSSSCEEEEETTEEEEEE
T ss_pred CccEEEEEEEeCCCC--CCCceeEEEEEeCCEEEEEcCCCCCCCCEEEeeeeE-EEECC---CCCCEEEEEcCCcEEEEE
Confidence 689999995555432 499999999999999986655555677888877664 44432 346799999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhhc
Q psy17028 297 PKNGKNAEQWVQCLSVVVAHSQ 318 (334)
Q Consensus 297 AdS~ee~~eWI~AI~~aIa~~~ 318 (334)
|+|++|+++||.+|+.++....
T Consensus 83 a~s~~e~~~Wi~al~~~~~~~~ 104 (114)
T 2da0_A 83 AEDEQDYVAWISVLTNSKEEAL 104 (114)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987653
No 29
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.85 E-value=1.5e-21 Score=162.48 Aligned_cols=98 Identities=14% Similarity=0.246 Sum_probs=75.6
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecC-C----C-----CCccceEEcCCeeEEEecCCCCCCCceEEE
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGS-K----E-----DKQETPIDVHRIRSVKVSRGARNIPKAFEI 286 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~-~----~-----~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I 286 (334)
.++++|||+| +|.. +++||+|||||+++.|+|+++ . + ..+.|.|+|..++.+.+.++..+++++|+|
T Consensus 11 ~~~k~G~L~K-~g~~--~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I 87 (124)
T 2w2x_D 11 EHKQQGELYM-WDSI--DQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFIL 87 (124)
T ss_dssp --CCEEEEEE-EETT--TTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEE
T ss_pred hcceeEEEEE-ECCC--CCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEEE
Confidence 5799999955 5544 699999999999999985442 1 1 235899999999755554333467899999
Q ss_pred EeCC---eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 287 FTGD---DSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 287 ~T~~---RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
.+++ ++|+|+|+|++|+++||+||+.++..+
T Consensus 88 ~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~ 121 (124)
T 2w2x_D 88 EPKQQGDPPVEFATDKVEELFEWFQSIREITWKI 121 (124)
T ss_dssp EECC--CCCEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred ECCCCCCceEEEEECCHHHHHHHHHHHHHHHHhh
Confidence 9874 689999999999999999999998654
No 30
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.85 E-value=7e-21 Score=160.70 Aligned_cols=94 Identities=19% Similarity=0.339 Sum_probs=78.6
Q ss_pred ceEEEEeccccCCCcccCC-ceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCC-----
Q psy17028 218 PVIEGQLKEKKGRWKIFKR-WRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD----- 290 (334)
Q Consensus 218 vlkeGwLkkK~G~~~~~K~-WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~----- 290 (334)
|+++|||.+++|.. +|. ||+|||||++++|+ ||++.++++.|.|+|.+.+..++..+..+++++|+|.+++
T Consensus 12 VirkGWL~k~~~g~--~k~~wk~rWFVLt~~~L~yyKd~~eke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~ 89 (125)
T 1dyn_A 12 VIRKGWLTINNIGI--MKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVY 89 (125)
T ss_dssp EEEEEEEEESCCCG--GGTSSEEEEEEEESSEEEEESSTTCSCEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSS
T ss_pred eEEEEEEEEecCcc--ccCCceeeEEEEeccceeeecCCcccccceEEECCCceEeccCCCCCCCceEEEEECCCCcccc
Confidence 89999996555555 786 99999999999998 6777888999999999986555544433678999999876
Q ss_pred ---eEEEEEcCCHHHHHHHHHHHHHH
Q psy17028 291 ---DSLILKPKNGKNAEQWVQCLSVV 313 (334)
Q Consensus 291 ---RTy~L~AdS~ee~~eWI~AI~~a 313 (334)
++|.|+|+|.+|+++||++|.+|
T Consensus 90 ~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 90 KDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp TTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred ccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 38999999999999999999665
No 31
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.84 E-value=2.4e-21 Score=156.12 Aligned_cols=95 Identities=18% Similarity=0.288 Sum_probs=74.1
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEE-eCCeeE-EecCCCCCccceEEcCCee-------EEEe--cCCCCCCCceEE
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTL-SGAHLS-YKGSKEDKQETPIDVHRIR-------SVKV--SRGARNIPKAFE 285 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL-~~~~L~-Yk~~~~~~p~g~I~L~~~~-------sV~~--~~~~~~k~~~F~ 285 (334)
.++++|||.| +|.. +++||+||||| .++.|+ |+++.+.++.|.|+|...+ .|.. ..+...++++|.
T Consensus 4 ~~~~~G~L~K-~g~~--~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~ 80 (112)
T 3aj4_A 4 AFVKSGWLLR-QSTI--LKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQ 80 (112)
T ss_dssp SCSEEEEEEE-ECSS--SCCEEEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEE
T ss_pred ceeEEEEEEe-eCCC--CCCeeceEEEEeeCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcEEE
Confidence 5789999954 5544 69999999999 788997 5556667789999998643 2221 122223368999
Q ss_pred EEeC-CeEEEEEcCCHHHHHHHHHHHHHHH
Q psy17028 286 IFTG-DDSLILKPKNGKNAEQWVQCLSVVV 314 (334)
Q Consensus 286 I~T~-~RTy~L~AdS~ee~~eWI~AI~~aI 314 (334)
|.++ +|+|+|+|+|++|+++||++|+.|.
T Consensus 81 i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 81 IVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp EEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 9976 7999999999999999999999985
No 32
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.6e-20 Score=152.94 Aligned_cols=98 Identities=19% Similarity=0.313 Sum_probs=79.1
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecC-CCCCCCceEEEEeC-CeE
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSR-GARNIPKAFEIFTG-DDS 292 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~-~~~~k~~~F~I~T~-~RT 292 (334)
..++++|||.|+++.. +++|++|||||+++.|+ |+++.+..|.|.|+|..++...+.. +..+++++|.|.++ +++
T Consensus 20 ~~~~~~G~L~K~~~~~--~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~ 97 (122)
T 2yry_A 20 APVTKAGWLFKQASSG--VKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRT 97 (122)
T ss_dssp CCEEEEEEEEEECCSS--SCCEEEEEEEEETTEEEEESSTTCCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCE
T ss_pred CCccEEEEEEEECCCC--CCCcEEEEEEEeCCEEEEECCCCCCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcE
Confidence 3689999996555444 69999999999999998 5556677899999999986333322 22356789999765 589
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 293 LILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 293 y~L~AdS~ee~~eWI~AI~~aIa 315 (334)
|+|+|+|++|+++||.+|+.|+.
T Consensus 98 ~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 98 YFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEEEcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999874
No 33
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.5e-20 Score=151.73 Aligned_cols=98 Identities=19% Similarity=0.313 Sum_probs=79.3
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecC-CCCCCCceEEEEeC-CeE
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSR-GARNIPKAFEIFTG-DDS 292 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~-~~~~k~~~F~I~T~-~RT 292 (334)
..++++|||.|+++.. +++||+|||||+++.|+ |+++.+..+.|.|+|..++...+.. +..+++++|.|.++ +++
T Consensus 9 ~~~~~~G~L~K~~~~~--~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~ 86 (117)
T 2d9y_A 9 APVTKAGWLFKQASSG--VKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRT 86 (117)
T ss_dssp CCCCEEEEEEEECTTS--SSCEEEEEEEEETTEEEEESSTTCCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCE
T ss_pred CCeeEEEEEEEeCCCC--CCCceEEEEEECCCEEEEECCCCCCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcE
Confidence 3689999996555444 69999999999999998 5556677899999999986433322 22456789999765 589
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 293 LILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 293 y~L~AdS~ee~~eWI~AI~~aIa 315 (334)
|+|+|+|++|+++||.+|+.++.
T Consensus 87 ~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 87 YFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTC
T ss_pred EEEEcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999875
No 34
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.84 E-value=4e-21 Score=162.81 Aligned_cols=101 Identities=20% Similarity=0.295 Sum_probs=80.4
Q ss_pred CCCceEEEEeccccCCC---cccCCceeEEEEEeCC-----eeE-EecCC-CCCccceEEcCCeeEEEecCCCCCCCceE
Q psy17028 215 DSHPVIEGQLKEKKGRW---KIFKRWRTRYFTLSGA-----HLS-YKGSK-EDKQETPIDVHRIRSVKVSRGARNIPKAF 284 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~---~~~K~WKrRwFVL~~~-----~L~-Yk~~~-~~~p~g~I~L~~~~sV~~~~~~~~k~~~F 284 (334)
.+.++++|||.|+++.. ..+++||+|||||+++ .|. |+++. +..|.|.|+|..+..+... ...++++|
T Consensus 15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~~--~~~~~~~F 92 (150)
T 1wg7_A 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQN--NKVRRFAF 92 (150)
T ss_dssp SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCC--CSSCTTEE
T ss_pred CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccCEEEecC--CCCCceEE
Confidence 35789999995544210 1268999999999997 887 55555 5679999999998766432 23567999
Q ss_pred EEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 285 EIFTGD-DSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 285 ~I~T~~-RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
.|.|++ |+|+|+|+|++|+++||.+|+.++..+
T Consensus 93 ~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~ 126 (150)
T 1wg7_A 93 ELKMQDKSSYLLAADSEVEMEEWITILNKILQLN 126 (150)
T ss_dssp EEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 999996 899999999999999999999998744
No 35
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.84 E-value=8.3e-21 Score=150.76 Aligned_cols=91 Identities=22% Similarity=0.413 Sum_probs=72.9
Q ss_pred EEEEeccccCCCcccCCceeEEEEEeCCeeEEec-CCC--CCccceEEcCCeeEEEecCCCCCCCceEEEEeC-CeEEEE
Q psy17028 220 IEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKG-SKE--DKQETPIDVHRIRSVKVSRGARNIPKAFEIFTG-DDSLIL 295 (334)
Q Consensus 220 keGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~-~~~--~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~-~RTy~L 295 (334)
+|||| .|+|+. +++||+|||||+++.|+|++ +.+ ..+.|.|+|..+ .|.... ..+++|.|.++ +++|+|
T Consensus 1 ~eG~L-~K~g~~--~k~Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~~-~v~~~~---~~~~~F~i~~~~~r~~~l 73 (103)
T 3rcp_A 1 MEGVL-YKWTNY--LTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAVC-EIKVHS---ADNTRMELIIPGEQHFYM 73 (103)
T ss_dssp CEEEE-EEECCT--TTCEEEEEEEEETTEEEEESSCC---CCCSCEEEGGGC-EEECCT---TCSSEEEEEETTTEEEEE
T ss_pred CceEE-EEccCC--CCCeeceEEEEECCEEEEEecCCcccCCcccEEEeeee-EEEEcC---CCCceEEEEeCCCCEEEE
Confidence 58999 555555 69999999999999998555 442 358999999765 444322 24689999998 799999
Q ss_pred EcCCHHHHHHHHHHHHHHHHhh
Q psy17028 296 KPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 296 ~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
+|+|++|+++||++|+.|++..
T Consensus 74 ~a~s~~e~~~Wi~al~~a~~~~ 95 (103)
T 3rcp_A 74 KAVNAAERQRWLVALGSSKASL 95 (103)
T ss_dssp ECSSHHHHHHHHHHHHTTSCCC
T ss_pred ECCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999987653
No 36
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.84 E-value=1.5e-21 Score=160.50 Aligned_cols=103 Identities=23% Similarity=0.419 Sum_probs=79.6
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeC-CeeE-EecCCCCCccceEEcCCeeEE--EecCCCCCCCceEEEEe---
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSG-AHLS-YKGSKEDKQETPIDVHRIRSV--KVSRGARNIPKAFEIFT--- 288 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~-~~L~-Yk~~~~~~p~g~I~L~~~~sV--~~~~~~~~k~~~F~I~T--- 288 (334)
+.++++||| .|+|.. +++||+|||||++ +.|+ |+++.+..+.|.|+|..++.+ .+...+..++++|.|.+
T Consensus 6 ~~~~~~G~L-~K~g~~--~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~ 82 (125)
T 1unq_A 6 VAIVKEGWL-HKRGEY--IKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW 82 (125)
T ss_dssp GCEEEEEEE-EEECSS--SCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEET
T ss_pred CCeeEEeeE-EeccCC--ccCccCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeeeecccccCCCCEEEEEecCC
Confidence 478999999 455554 6999999999996 5887 555666678899999876532 11111235678999985
Q ss_pred -CCeEEEEEcCCHHHHHHHHHHHHHHHHhhcccc
Q psy17028 289 -GDDSLILKPKNGKNAEQWVQCLSVVVAHSQAKE 321 (334)
Q Consensus 289 -~~RTy~L~AdS~ee~~eWI~AI~~aIa~~~~ke 321 (334)
+.++|+|+|+|++|+++||.+|+.++...+.++
T Consensus 83 ~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~~~ 116 (125)
T 1unq_A 83 TTVIERTFHVETPEEREEWTTAIQTVADGLKKQE 116 (125)
T ss_dssp TEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeEEEEeCCHHHHHHHHHHHHHHHhhcccch
Confidence 468999999999999999999999998765544
No 37
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.84 E-value=1.4e-20 Score=159.64 Aligned_cols=102 Identities=20% Similarity=0.320 Sum_probs=80.7
Q ss_pred CCceEEEEeccccCCCc-ccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecC--CCCCCCceEEEEeCC-
Q psy17028 216 SHPVIEGQLKEKKGRWK-IFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSR--GARNIPKAFEIFTGD- 290 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~-~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~--~~~~k~~~F~I~T~~- 290 (334)
+.++++|||.||++..+ ..++||+|||||+++.|+ |+++.+..+.|.|+|..++.+.... .+.+++++|.|.|++
T Consensus 15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~ 94 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK 94 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTS
T ss_pred CCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCCcccceEEEcCCcEEEECCCcccCCCCccEEEEECCCC
Confidence 47899999965554322 358999999999999998 5556667899999999986443321 123456899999988
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 291 DSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 291 RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
|+|+|+|+|++++++||.+|+.++...
T Consensus 95 r~~~l~a~s~~e~~~Wi~al~~~i~~~ 121 (148)
T 1u5f_A 95 RIYQFTAASPKDAEEWVQQLKFILQDL 121 (148)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHCC--
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999998654
No 38
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.83 E-value=9.6e-21 Score=157.43 Aligned_cols=98 Identities=24% Similarity=0.415 Sum_probs=71.3
Q ss_pred CceEEEEeccccCC-CcccCCceeEEEEEeCC-eeEEecCCC----CCccceEEcCCeeEEEecC---------------
Q psy17028 217 HPVIEGQLKEKKGR-WKIFKRWRTRYFTLSGA-HLSYKGSKE----DKQETPIDVHRIRSVKVSR--------------- 275 (334)
Q Consensus 217 ~vlkeGwLkkK~G~-~~~~K~WKrRwFVL~~~-~L~Yk~~~~----~~p~g~I~L~~~~sV~~~~--------------- 275 (334)
.++++|||.|++|+ . +|+||+|||||+++ .|+|+++.. ....+.|+|..++. ++..
T Consensus 3 ~~~k~G~L~K~~g~~~--~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~-~~~~~~i~l~~~~~~~~~~ 79 (128)
T 2rlo_A 3 IPIKQSFLLKRSGNSL--NKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTV-KVPGKRPPRAISAFGPSAS 79 (128)
T ss_dssp CEEEEEEEEEECSCST--TCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEE-ECSSCCCCCSSCCCSCCSC
T ss_pred cceeEEEEEEecCCCc--cCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEE-ecCCCcccccccccccccc
Confidence 57899999555464 4 79999999999975 566776421 12234566665432 2111
Q ss_pred ---C-CCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 276 ---G-ARNIPKAFEIFTGD-DSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 276 ---~-~~~k~~~F~I~T~~-RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
. ...++++|.|+|++ |+|+|+|+|++|+++||+||+.+|..+
T Consensus 80 ~~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~ 126 (128)
T 2rlo_A 80 GSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILAS 126 (128)
T ss_dssp CCCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 0 11457899999998 899999999999999999999998763
No 39
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.83 E-value=4.2e-20 Score=154.57 Aligned_cols=94 Identities=15% Similarity=0.344 Sum_probs=75.7
Q ss_pred ceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCC---CCCccceEEcCCeeEEEecCCCC-------CCCceEEE
Q psy17028 218 PVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSK---EDKQETPIDVHRIRSVKVSRGAR-------NIPKAFEI 286 (334)
Q Consensus 218 vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~---~~~p~g~I~L~~~~sV~~~~~~~-------~k~~~F~I 286 (334)
++++||| .|+|+. +|+|++|||||+++.|+ ||++. +..|.|+|+|.+|+...+.+++. .+++.|.|
T Consensus 6 ~~k~G~L-~Kk~~~--~k~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i 82 (120)
T 4a6h_A 6 EIKSGFL-ERRSKF--LKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVL 82 (120)
T ss_dssp CSEEEEE-EEEETT--TTEEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEE
T ss_pred ccEEEEE-EEcCCC--CCCCccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEE
Confidence 7999999 556655 79999999999999998 55543 55699999999887655544321 16789999
Q ss_pred EeCC-------eEEEEEcCCHHHHHHHHHHHHHHH
Q psy17028 287 FTGD-------DSLILKPKNGKNAEQWVQCLSVVV 314 (334)
Q Consensus 287 ~T~~-------RTy~L~AdS~ee~~eWI~AI~~aI 314 (334)
.+.+ ++|+|+|+|.+||++||++|+.+.
T Consensus 83 ~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 83 HAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp EESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 8876 499999999999999999999875
No 40
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.82 E-value=2.6e-20 Score=153.29 Aligned_cols=99 Identities=18% Similarity=0.364 Sum_probs=78.3
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeC--CeeEEecC--CCCCccceEEcCCeeEEEecCC----C-C--CCCce
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSG--AHLSYKGS--KEDKQETPIDVHRIRSVKVSRG----A-R--NIPKA 283 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~--~~L~Yk~~--~~~~p~g~I~L~~~~sV~~~~~----~-~--~k~~~ 283 (334)
.+.++++||| .|+|.. .++||+|||||++ ..|+|+++ .+..|.|.|+|..+..+.+.+. . + .++++
T Consensus 15 ~~~~~~~G~L-~K~g~~--~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~ 91 (129)
T 1x1g_A 15 SGTVVKQGYL-AKQGHK--RKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNL 91 (129)
T ss_dssp CSEEEEEEEE-EEECSS--SSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSC
T ss_pred CCCEEEEEEE-EEECCC--CCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCCCCCcccccCCCCCce
Confidence 3578999999 455554 6999999999994 57876554 5668999999998754444221 0 1 15789
Q ss_pred EEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 284 FEIFTGD-DSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 284 F~I~T~~-RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
|.|.|++ ++|+|+|+|++|+++||++|+.++.+
T Consensus 92 F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 125 (129)
T 1x1g_A 92 FKVITKDDTHYYIQASSKAERAEWIEAIKKLTSG 125 (129)
T ss_dssp EEECCTTCCCEEECCSSHHHHHHHHHHHHHHSSS
T ss_pred EEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 9999997 68999999999999999999999864
No 41
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.82 E-value=2.9e-20 Score=153.94 Aligned_cols=99 Identities=22% Similarity=0.303 Sum_probs=78.2
Q ss_pred CCceEEEEecccc-CCCcccCCceeEEEEEeCCeeEEec----CCCCCccceEEcCCeeE--EEecCCC-CCCCceEEEE
Q psy17028 216 SHPVIEGQLKEKK-GRWKIFKRWRTRYFTLSGAHLSYKG----SKEDKQETPIDVHRIRS--VKVSRGA-RNIPKAFEIF 287 (334)
Q Consensus 216 g~vlkeGwLkkK~-G~~~~~K~WKrRwFVL~~~~L~Yk~----~~~~~p~g~I~L~~~~s--V~~~~~~-~~k~~~F~I~ 287 (334)
..++++|||.+++ |.. +++||+|||||+++.|+|++ +....|.|.|+|..++. |...+.+ .+++++|.|.
T Consensus 3 ~~v~~~G~L~K~~~~~~--~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~ 80 (134)
T 2y7b_A 3 SSVEERGFLTIFEDVSG--FGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANREFCARRNTFELI 80 (134)
T ss_dssp CCCCEEEEEEEEEEETT--EEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEE
T ss_pred CCceEEeeEEEEcCCCC--CCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccchhhccCCCEEEEE
Confidence 3689999995551 333 69999999999999998554 23368999999999764 5543321 3568999998
Q ss_pred e--CC------------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 288 T--GD------------------DSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 288 T--~~------------------RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
+ ++ ++|+|+|+|++|+++||++|+.++..
T Consensus 81 ~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 81 TVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 7 33 47999999999999999999999875
No 42
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.82 E-value=3.4e-20 Score=152.37 Aligned_cols=101 Identities=21% Similarity=0.383 Sum_probs=76.7
Q ss_pred CceEEEEeccccCC-----CcccCCceeEEEEEeCCeeE-EecCCCC----C--ccceEEcCCeeEEEecCCCCCCCceE
Q psy17028 217 HPVIEGQLKEKKGR-----WKIFKRWRTRYFTLSGAHLS-YKGSKED----K--QETPIDVHRIRSVKVSRGARNIPKAF 284 (334)
Q Consensus 217 ~vlkeGwLkkK~G~-----~~~~K~WKrRwFVL~~~~L~-Yk~~~~~----~--p~g~I~L~~~~sV~~~~~~~~k~~~F 284 (334)
.++++|||.+|+.. ....++|++|||||+++.|+ |+++++. . +...|+|..+. +.+..+..+++++|
T Consensus 7 ~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~-~~~~~~~~~r~~~F 85 (123)
T 1wjm_A 7 GEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQ-GSVAFDYRKRKHVF 85 (123)
T ss_dssp CCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCE-EEECTTCSSCSSEE
T ss_pred CeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcE-EeecccccCCCCEE
Confidence 67899999665431 11258999999999999998 5553321 1 34567777653 44444445678999
Q ss_pred EEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q psy17028 285 EIFTGD-DSLILKPKNGKNAEQWVQCLSVVVAHSQ 318 (334)
Q Consensus 285 ~I~T~~-RTy~L~AdS~ee~~eWI~AI~~aIa~~~ 318 (334)
.|.|++ ++|+|+|+|++||++||++|+.+++..+
T Consensus 86 ~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~~ 120 (123)
T 1wjm_A 86 KLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASGP 120 (123)
T ss_dssp EEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhccC
Confidence 999987 8999999999999999999999998654
No 43
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.82 E-value=7e-20 Score=151.58 Aligned_cols=97 Identities=14% Similarity=0.226 Sum_probs=78.0
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCC---eeE-EecCCCCCccceEEcCCeeEEEecCC-CCCCCceEEEEeCC
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGA---HLS-YKGSKEDKQETPIDVHRIRSVKVSRG-ARNIPKAFEIFTGD 290 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~---~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~-~~~k~~~F~I~T~~ 290 (334)
+..++.|||.+ +++ .+.||+|||||+++ .|+ |+++++.+|.|.|+|.+++...+... ...++++|+|.+++
T Consensus 6 ~~~~~~G~L~k-~~~---~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~ 81 (112)
T 2coc_A 6 SGSLLCGPLRL-SES---GETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAK 81 (112)
T ss_dssp SSSSSEEEEEE-ESS---SSCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGGCEEECCCSSSCCSSSEEEEEEETT
T ss_pred CCceEEEEEEe-cCC---CCCceEEEEEEECCCccEEEEECCCCccCcceEEEcCCCEEEecCcccccCCCCEEEEecCC
Confidence 45678899954 444 48999999999986 477 66777788999999999854322222 22467999999999
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 291 DSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 291 RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
++|+|+|+|+++|++||++|+.|+..
T Consensus 82 ~~y~f~A~s~e~~~~Wl~al~~A~~~ 107 (112)
T 2coc_A 82 QSWYLSASSAELQQQWLETLSTAAHS 107 (112)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHSC
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999998654
No 44
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.81 E-value=7.5e-20 Score=158.22 Aligned_cols=97 Identities=19% Similarity=0.354 Sum_probs=67.5
Q ss_pred CceEEEEecc---------ccCCCcccCCceeEEEEEeCCeeE-EecCCC--CCccceEEcCCee-EEEecCCCCCCCce
Q psy17028 217 HPVIEGQLKE---------KKGRWKIFKRWRTRYFTLSGAHLS-YKGSKE--DKQETPIDVHRIR-SVKVSRGARNIPKA 283 (334)
Q Consensus 217 ~vlkeGwLkk---------K~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~--~~p~g~I~L~~~~-sV~~~~~~~~k~~~ 283 (334)
.++++|||.+ |+|.. +++||+|||||+++.|+ |+++.+ ..+.|.|+|.... .+.+.....+++++
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~--~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~ 79 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGS--IRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSETKRKNV 79 (168)
T ss_dssp -CCEEEEEEEEECC--------------CCEEEEEEEETTEEEEESCTTCC--------CEECSSCEEEECSSSCSCSSE
T ss_pred CCcEEEEEeeeeecccCCcccCCC--CCCceEEEEEEeCCEEEEEECCcccccccCCceEecccceEEEeccccCCCCCE
Confidence 4789999963 55544 79999999999999998 455533 4688999888732 34444444467899
Q ss_pred EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 284 FEIFTGDDSLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 284 F~I~T~~RTy~L~AdS~ee~~eWI~AI~~aIa 315 (334)
|.|.|++++|+|+|+|++|+++||++|+.++.
T Consensus 80 F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 80 FRLTTSDCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp EEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998864
No 45
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.81 E-value=9e-20 Score=144.68 Aligned_cols=93 Identities=19% Similarity=0.452 Sum_probs=70.9
Q ss_pred EEEEecccc-----CCCcccCCceeEEEEEeCCeeE-EecCC----CC--CccceEEcCCeeEEEecCCCCCCCceEEEE
Q psy17028 220 IEGQLKEKK-----GRWKIFKRWRTRYFTLSGAHLS-YKGSK----ED--KQETPIDVHRIRSVKVSRGARNIPKAFEIF 287 (334)
Q Consensus 220 keGwLkkK~-----G~~~~~K~WKrRwFVL~~~~L~-Yk~~~----~~--~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~ 287 (334)
+||||.+|+ |+....++|++|||||+++.|+ |+++. +. .+.+.|+|..+. +.+..+..+++++|+|.
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~-~~~~~~~~~~~~~F~i~ 79 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAI-CEVALDYKKKKHVFKLR 79 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCE-EEECSSCCSSSSEEEEE
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCE-EEEcccccCCccEEEEE
Confidence 589996665 1112269999999999999998 55433 12 366788888764 44434445678999999
Q ss_pred eCC-eEEEEEcCCHHHHHHHHHHHHHH
Q psy17028 288 TGD-DSLILKPKNGKNAEQWVQCLSVV 313 (334)
Q Consensus 288 T~~-RTy~L~AdS~ee~~eWI~AI~~a 313 (334)
|++ ++|+|+|+|++|+++||.+|+.|
T Consensus 80 ~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 80 LSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp CTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred ecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 887 89999999999999999999874
No 46
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=6.9e-20 Score=147.35 Aligned_cols=94 Identities=15% Similarity=0.278 Sum_probs=72.0
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCC-C-CCccceEEcCCeeEEEecCCCCCCCceEEEEeC-CeE
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSK-E-DKQETPIDVHRIRSVKVSRGARNIPKAFEIFTG-DDS 292 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~-~-~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~-~RT 292 (334)
..++++|||.| + . .++||+|||||+++.|+|++++ + ..+.+.|+|..+ .|.... +..++++|.|.++ +|+
T Consensus 6 ~~~~~~G~L~K-~-~---~k~Wk~RwfvL~~~~L~yyk~~~~~~~~~~~i~l~~~-~v~~~~-~~~~~~~F~i~~~~~r~ 78 (107)
T 2cof_A 6 SGLETSSYLNV-L-V---NSQWKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGC-EVVPDP-SPDHLYSFRILHKGEEL 78 (107)
T ss_dssp CCCTTCCEEEE-E-E---TTEEEEEEEEECSSCEEEECSSTTCSEEEEEECTTTC-EEECCC-BTTBSCEEEEEETTEEE
T ss_pred CCCcEeEEEEE-e-c---CCCcceEEEEEECCEEEEEeCCcccCCCeeEEeccce-EEEECC-CCCCCeEEEEEeCCCeE
Confidence 46789999954 4 2 5999999999999999855433 3 234555556555 354433 2356799999999 789
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 293 LILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 293 y~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
|+|+|+|++|+++||++|+.++..
T Consensus 79 ~~l~A~s~~e~~~Wi~al~~~~~~ 102 (107)
T 2cof_A 79 AKLEAKSSEEMGHWLGLLLSESGS 102 (107)
T ss_dssp EEEECSSHHHHHHHHHHHHHHSSC
T ss_pred EEEEcCCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999998654
No 47
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.80 E-value=1.5e-19 Score=164.20 Aligned_cols=100 Identities=20% Similarity=0.332 Sum_probs=81.7
Q ss_pred CceEEEEeccccCCCc-ccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecC--CCCCCCceEEEEeCC-e
Q psy17028 217 HPVIEGQLKEKKGRWK-IFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSR--GARNIPKAFEIFTGD-D 291 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~-~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~--~~~~k~~~F~I~T~~-R 291 (334)
.++++|||.||++..+ ..++||+|||||+++.|+ |+++.+..|.|.|+|..++.+.... .+..++++|.|.|++ |
T Consensus 105 ~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r 184 (211)
T 1u5e_A 105 FVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKR 184 (211)
T ss_dssp SEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSC
T ss_pred CccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCCccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCC
Confidence 6899999965554311 258999999999999998 5556666899999999998776422 223457899999986 9
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 292 SLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 292 Ty~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
+|+|+|+|++++++||.+|+.+|..
T Consensus 185 ~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 185 IYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999865
No 48
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.79 E-value=2.3e-19 Score=176.62 Aligned_cols=134 Identities=20% Similarity=0.276 Sum_probs=97.2
Q ss_pred cCChhHHHHHHHHHhhcCccccccccccCCCCCCcceeeeccCCcccc---cccCCCCceEEEEeccccCCCccc-CCce
Q psy17028 163 LIDAQDQEAVLNELRHSGFCDVFEYGVSGGGKEASWGCFLCNHPERAV---GFLQDSHPVIEGQLKEKKGRWKIF-KRWR 238 (334)
Q Consensus 163 f~~~~d~~~~~~~L~~~~~f~~f~~~~~~~g~~~~w~c~~c~~pe~a~---~~~~~g~vlkeGwLkkK~G~~~~~-K~WK 238 (334)
-.+.+|.+.|++.|+.+.+-. . .. ..|.... ...-...++++||| .|+|.. . ++||
T Consensus 228 A~s~~e~~~Wi~aIr~a~~~~-l---q~-------------~~p~~~~~el~~~l~~~~~k~G~L-~K~g~~--~~k~WK 287 (386)
T 3lju_X 228 HEDGKEIVDWFNALRAARFHY-L---QV-------------AFPGASDADLVPKLSRNYLKEGYM-EKTGPK--QTEGFR 287 (386)
T ss_dssp CSSHHHHHHHHHHHHHHHHHH-H---HH-------------HSTTCCHHHHGGGSSCCCSEEEEE-EECCTT--SCSCCE
T ss_pred cCCHHHHHHHHHhhhhccccc-c---cc-------------cCCccchhhcccccccccceeeeE-EEECCC--CCCCCc
Confidence 457889999999999875421 1 10 1121111 11123478999999 555554 4 9999
Q ss_pred eEEEEEeCCeeEE-ecCCCCCccceEEcCCeeE---EEe-cC-CCCC--CCceEEEEeCCeEEEEEcCCHHHHHHHHHHH
Q psy17028 239 TRYFTLSGAHLSY-KGSKEDKQETPIDVHRIRS---VKV-SR-GARN--IPKAFEIFTGDDSLILKPKNGKNAEQWVQCL 310 (334)
Q Consensus 239 rRwFVL~~~~L~Y-k~~~~~~p~g~I~L~~~~s---V~~-~~-~~~~--k~~~F~I~T~~RTy~L~AdS~ee~~eWI~AI 310 (334)
+|||||+++.|+| +++.+..+.|.|+|..+.. |.. .. ...+ .+++|+|.|++|+|+|+|+|++|+++||.||
T Consensus 288 kRwFVL~~~~L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL 367 (386)
T 3lju_X 288 KRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAF 367 (386)
T ss_dssp EEEEEEETTEEEEESSTTCSBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHH
T ss_pred ccEEEEECCEEEEEecCCCcccceEEEeecceeeeeecccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHH
Confidence 9999999999985 5556667999999987643 322 11 1111 2689999999999999999999999999999
Q ss_pred HHHHHh
Q psy17028 311 SVVVAH 316 (334)
Q Consensus 311 ~~aIa~ 316 (334)
+.+|++
T Consensus 368 ~~~i~~ 373 (386)
T 3lju_X 368 QKAVDR 373 (386)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 999975
No 49
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.79 E-value=5.6e-19 Score=147.09 Aligned_cols=102 Identities=16% Similarity=0.309 Sum_probs=76.7
Q ss_pred cCCCCceEEEEecccc----CCCcccCCceeEEEEEeCCeeE-EecCCCC------------CccceEEcCCeeEEEecC
Q psy17028 213 LQDSHPVIEGQLKEKK----GRWKIFKRWRTRYFTLSGAHLS-YKGSKED------------KQETPIDVHRIRSVKVSR 275 (334)
Q Consensus 213 ~~~g~vlkeGwLkkK~----G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~------------~p~g~I~L~~~~sV~~~~ 275 (334)
++.+.+.++|||.+|. |+....++|++|||||+++.|+ |+++++. .|.+.|+|.++. |....
T Consensus 3 ~~~~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~-v~~~~ 81 (124)
T 3pp2_A 3 VRTKTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGAT-LSWAP 81 (124)
T ss_dssp ------CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCE-EEECC
T ss_pred ccCCcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCE-EEecc
Confidence 4667899999997662 4321236999999999999998 7765432 478999999864 44442
Q ss_pred -CCCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 276 -GARNIPKAFEIFTGD-DSLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 276 -~~~~k~~~F~I~T~~-RTy~L~AdS~ee~~eWI~AI~~aIa 315 (334)
+..+++++|.|.|++ ++|+|+|+|++||++||++|+.||.
T Consensus 82 ~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 82 KDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp GGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred cccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 445678999999976 6999999999999999999999985
No 50
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.79 E-value=1.6e-19 Score=148.79 Aligned_cols=99 Identities=17% Similarity=0.317 Sum_probs=76.3
Q ss_pred CceEEEEecccc-----CCCcccCCceeEEEEEeCCeeE-EecCCCCCc--------cceEEcCCeeEEEecCCCCCCCc
Q psy17028 217 HPVIEGQLKEKK-----GRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQ--------ETPIDVHRIRSVKVSRGARNIPK 282 (334)
Q Consensus 217 ~vlkeGwLkkK~-----G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p--------~g~I~L~~~~sV~~~~~~~~k~~ 282 (334)
.+.++|||.+|+ |+....++||+|||||+++.|+ |+++.+..+ .+.|+|..+. |....+..++++
T Consensus 7 ~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~-v~~~~d~~kr~~ 85 (122)
T 1dro_A 7 GEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAA-IEIASDYTKKKH 85 (122)
T ss_dssp SSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCC-CEECCSSSSSTT
T ss_pred ceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCE-EEeCCCCCCCCe
Confidence 578999996654 2211369999999999999998 666543222 3679998763 444444456789
Q ss_pred eEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 283 AFEIFTG-DDSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 283 ~F~I~T~-~RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
+|.|.|+ .++|+|+|+|++||++||++|+.+|..
T Consensus 86 ~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 86 VLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp EEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred EEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 9999975 589999999999999999999999864
No 51
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.77 E-value=1.5e-18 Score=162.74 Aligned_cols=105 Identities=17% Similarity=0.265 Sum_probs=80.8
Q ss_pred CCceEEEEec-------cccCCCc--ccCCceeEEEEEeCCeeE-EecC------CCCCccceEEcCCeeEEEecCCCCC
Q psy17028 216 SHPVIEGQLK-------EKKGRWK--IFKRWRTRYFTLSGAHLS-YKGS------KEDKQETPIDVHRIRSVKVSRGARN 279 (334)
Q Consensus 216 g~vlkeGwLk-------kK~G~~~--~~K~WKrRwFVL~~~~L~-Yk~~------~~~~p~g~I~L~~~~sV~~~~~~~~ 279 (334)
+.++++|||. .|+|+.. .+|+||+|||||+++.|+ |+++ .+..|.|.|+|.++....+ .++.+
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~-~~~~k 87 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSV-PEHPK 87 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEEC-TTCSS
T ss_pred CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEEC-CcCCC
Confidence 5789999996 2565421 158999999999999998 5553 3457899999997754333 33345
Q ss_pred CCceEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhhcccc
Q psy17028 280 IPKAFEIFT-GDDSLILKPKNGKNAEQWVQCLSVVVAHSQAKE 321 (334)
Q Consensus 280 k~~~F~I~T-~~RTy~L~AdS~ee~~eWI~AI~~aIa~~~~ke 321 (334)
++++|+|.| ++++|+|+|+|++|+++||++|+.++....++.
T Consensus 88 k~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~~~~ 130 (263)
T 3a8p_A 88 KEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLFAKK 130 (263)
T ss_dssp CSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhccccc
Confidence 689999999 578999999999999999999999987655443
No 52
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.77 E-value=1.1e-18 Score=164.02 Aligned_cols=97 Identities=19% Similarity=0.322 Sum_probs=77.0
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCC-------eeEEec-CCC-----CCccceEEcCCeeEEEecCCCCCCCc
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGA-------HLSYKG-SKE-----DKQETPIDVHRIRSVKVSRGARNIPK 282 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~-------~L~Yk~-~~~-----~~p~g~I~L~~~~sV~~~~~~~~k~~ 282 (334)
+.++++||| .|+ |+||+|||||+++ .|.|++ +++ .++.|.|+|..+..|....+ ..+++
T Consensus 8 ~~v~k~G~L-~K~------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~-~~~~~ 79 (264)
T 1qqg_A 8 SDVRKVGYL-RKP------KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRAD-SKNKH 79 (264)
T ss_dssp -CEEEEEEE-ECT------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECC-SSCSS
T ss_pred CCccEEEEE-EEC------CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccC-CCCCc
Confidence 378999999 444 6799999999998 887555 433 47999999999988865433 35678
Q ss_pred eEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhccc
Q psy17028 283 AFEIFTGDDSLILKPKNGKNAEQWVQCLSVVVAHSQAK 320 (334)
Q Consensus 283 ~F~I~T~~RTy~L~AdS~ee~~eWI~AI~~aIa~~~~k 320 (334)
+|.|.|++|+|+|+|+|++|+++||++|+.++......
T Consensus 80 ~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~k~~ 117 (264)
T 1qqg_A 80 LVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRAKGH 117 (264)
T ss_dssp EEEEEESSCEEEEECSSHHHHHHHHHHHHHHC------
T ss_pred EEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999998776543
No 53
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.76 E-value=1.9e-18 Score=168.64 Aligned_cols=105 Identities=17% Similarity=0.315 Sum_probs=78.4
Q ss_pred CCceEEEEeccccCCCcc-cCCceeEEEEEeCCeeEEecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCC--eE
Q psy17028 216 SHPVIEGQLKEKKGRWKI-FKRWRTRYFTLSGAHLSYKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD--DS 292 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~-~K~WKrRwFVL~~~~L~Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~--RT 292 (334)
+.++++|||.||++. .. .++|++|||||+++.|+|++.++..+.+.|+|..|+.... +. ..+++||+|.|++ ++
T Consensus 276 ~~~~k~G~L~K~~~~-~~~~~~WkkRwfvL~~~~L~y~k~~~~~~~~~i~l~~~~v~~~-~~-~~r~~~F~i~t~~~~~~ 352 (385)
T 2q13_A 276 NLTRKAGYLNARNKT-GLVSSTWDRQFYFTQGGNLMSQARGDVAGGLAMDIDNCSVMAV-DC-EDRRYCFQITSFDGKKS 352 (385)
T ss_dssp CCSCCEEEEEEC---------CCEEEEEEEETTEEEEECSSCSSCEEEEECTTCEEEEE-CC-TTCSSEEEEECTTSCBC
T ss_pred CCccEEEEEEEecCC-CCCcCCceeEEEEEECCEEEEecCCCcCCCceEEccceEEEec-cc-cCCCceEEEEeCCCCeE
Confidence 468999999555432 11 2479999999999999865555556889999999854333 32 3567999999999 99
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhhccccCC
Q psy17028 293 LILKPKNGKNAEQWVQCLSVVVAHSQAKEMP 323 (334)
Q Consensus 293 y~L~AdS~ee~~eWI~AI~~aIa~~~~ke~~ 323 (334)
|+|+|+|++|+++||+||+.++.+....++|
T Consensus 353 ~~l~A~s~~e~~~Wi~ai~~~~~~~~~~~~~ 383 (385)
T 2q13_A 353 SILQAESKKDHEEWICTINNISKQIYLSENP 383 (385)
T ss_dssp CCEECSSHHHHHHHHHHHHHHHTTCC-----
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHhhccccCC
Confidence 9999999999999999999999876666654
No 54
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.74 E-value=7.3e-18 Score=163.45 Aligned_cols=96 Identities=20% Similarity=0.436 Sum_probs=78.9
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeC------
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTG------ 289 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~------ 289 (334)
.++++|||.| +|+. +++||+|||||+++.|+| +++.+..|.|.|+|.+++...+ . ..+++++|+|.++
T Consensus 212 ~~~k~G~L~K-~g~~--~k~WkkRwFVL~~~~L~Yyk~~~~~~p~G~I~L~~~~v~~~-~-~~~~~~~F~I~~~~~~~~~ 286 (347)
T 2r09_A 212 NPDREGWLLK-LGGR--VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREV-E-DPRKPNCFELYNPSHKGQV 286 (347)
T ss_dssp CCCEEEEEEE-ECSS--SCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEE-C-CSSCSSEEEEECSSSTTCC
T ss_pred ccccCCeeEe-cCCC--cccceeEEEEEcCCEEEEEcCCCccCCcEEEEcCCeEEEEc-c-CCCCCCEEEEEeCCccccc
Confidence 5799999954 4544 699999999999999985 5556678999999999864333 2 2367899999987
Q ss_pred ----------------CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 290 ----------------DDSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 290 ----------------~RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
.|+|+|+|+|++|+++||++|+.++...
T Consensus 287 ~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~~ 330 (347)
T 2r09_A 287 IKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 330 (347)
T ss_dssp CCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred cccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 3799999999999999999999998754
No 55
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.74 E-value=1.8e-17 Score=140.41 Aligned_cols=97 Identities=23% Similarity=0.392 Sum_probs=77.1
Q ss_pred eEEEEecc----ccCCCcccCCceeEEEEEeCCeeEEecCC----------CCCccceEEcCCeeEEEecCCCCCCCceE
Q psy17028 219 VIEGQLKE----KKGRWKIFKRWRTRYFTLSGAHLSYKGSK----------EDKQETPIDVHRIRSVKVSRGARNIPKAF 284 (334)
Q Consensus 219 lkeGwLkk----K~G~~~~~K~WKrRwFVL~~~~L~Yk~~~----------~~~p~g~I~L~~~~sV~~~~~~~~k~~~F 284 (334)
.++|+|++ |+|+...+++|+||||+|.++.|+|++.+ +..|.+.|+|.++. |+. .++..++++|
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~-V~~-~e~~~~~~~F 79 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWM-VQL-PDDPEHPDIF 79 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCE-EEC-CCCTTSTTEE
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCE-EEe-cCCCCCCCEE
Confidence 46888854 45553247999999999999999855533 44799999999985 443 3334578999
Q ss_pred EEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 285 EIFTG--DDSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 285 ~I~T~--~RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
+|.++ +.+|.|+|+|++++++||++|+.++...
T Consensus 80 ~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~ 114 (126)
T 2dtc_A 80 QLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSS 114 (126)
T ss_dssp EEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSC
T ss_pred EEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcC
Confidence 99987 4689999999999999999999998753
No 56
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.73 E-value=5.4e-18 Score=166.51 Aligned_cols=103 Identities=18% Similarity=0.279 Sum_probs=80.1
Q ss_pred CceEEEEeccc--cCCCcccCCceeEEEEEeCCeeEEecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCC--eE
Q psy17028 217 HPVIEGQLKEK--KGRWKIFKRWRTRYFTLSGAHLSYKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD--DS 292 (334)
Q Consensus 217 ~vlkeGwLkkK--~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~--RT 292 (334)
.+.|+|||.+| .|.. .++|+||||||+++.|+|+...+..+.+.|+|..|+ |+..+. ..+++||+|.|++ ++
T Consensus 300 ~~~k~G~L~k~~~~g~~--~~~W~rrwfvl~~~~l~y~~~~~~~~~~~~~l~~~~-v~~~~~-~~r~~cF~i~~~~~~~~ 375 (407)
T 4h8s_A 300 LIQKAGYLNLRNKTGLV--TTTWERLYFFTQGGNLMCQPRGAVAGGLIQDLDNCS-VMAVDC-EDRRYCFQITTPNGKSG 375 (407)
T ss_dssp CSCCEEEEEEEEECSSS--CEEEEEEEEEECSSCEECCCTTCSSCCCCBCSSCCE-EEEECC-TTCSSEEEEECTTSSCC
T ss_pred cceeeceeeeeccCCCC--CCCceEEEEEEECCEEEEEeCCCCCCCeEEECCceE-EEECCC-CCCCceEEEEecCCCce
Confidence 57899999654 2444 689999999999999997665556788999999874 554333 3567999999987 68
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhhccccCC
Q psy17028 293 LILKPKNGKNAEQWVQCLSVVVAHSQAKEMP 323 (334)
Q Consensus 293 y~L~AdS~ee~~eWI~AI~~aIa~~~~ke~~ 323 (334)
|+|+|+|++|+++||+||+.+++..+..+.|
T Consensus 376 ~~l~A~s~~e~~~Wi~ai~~a~~~~~~~~np 406 (407)
T 4h8s_A 376 IILQAESRKENEEWICAINNISRQIYLTDNP 406 (407)
T ss_dssp EEEECSSSHHHHHHHHHHHHHHSCC------
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999999876554443
No 57
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.72 E-value=9.4e-18 Score=139.66 Aligned_cols=94 Identities=20% Similarity=0.431 Sum_probs=74.0
Q ss_pred EEEEecc-ccCCCcccC-CceeEEEEEeCCeeEEec-CC---CCCccceEEcCCeeEEEecCC-------CCCCCceEEE
Q psy17028 220 IEGQLKE-KKGRWKIFK-RWRTRYFTLSGAHLSYKG-SK---EDKQETPIDVHRIRSVKVSRG-------ARNIPKAFEI 286 (334)
Q Consensus 220 keGwLkk-K~G~~~~~K-~WKrRwFVL~~~~L~Yk~-~~---~~~p~g~I~L~~~~sV~~~~~-------~~~k~~~F~I 286 (334)
+||||++ |+|+. .| +|++|||||+++.|+|++ +. ...|.+.|||+.+..|+.... .+..|+.|+|
T Consensus 3 ~eGwl~~pk~~~~--~k~~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I 80 (117)
T 2rov_A 3 LEGWLSLPVRNNT--KKFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQI 80 (117)
T ss_dssp SEEEEECCCCSSS--SCCCCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEE
T ss_pred eEEEEEeecCCCc--cCCCcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEEE
Confidence 5999954 45554 57 899999999999998444 33 237899999998887764321 1235788999
Q ss_pred EeC------CeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 287 FTG------DDSLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 287 ~T~------~RTy~L~AdS~ee~~eWI~AI~~aIa 315 (334)
.++ +++++|.|+|++|+++||.+|+.+|.
T Consensus 81 ~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 81 LYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp EECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred EeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 864 58999999999999999999998874
No 58
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.67 E-value=5.4e-17 Score=150.63 Aligned_cols=96 Identities=19% Similarity=0.274 Sum_probs=73.4
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecCCCCCccceEEcCCeeE--EEecCC-----CCCCCceEEEEe
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGSKEDKQETPIDVHRIRS--VKVSRG-----ARNIPKAFEIFT 288 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~~~~~p~g~I~L~~~~s--V~~~~~-----~~~k~~~F~I~T 288 (334)
.|.++|||++|+++ .|+||+|||||+++.|+| +++.+..+.+.|+|.+... |....+ ....+++|.|.+
T Consensus 167 ~p~~~G~L~k~~~~---~k~WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~ 243 (291)
T 3tca_A 167 VPELEGALYLKEDG---KKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKH 243 (291)
T ss_dssp CCCCEEEEEEECTT---SSCEEEEEEEECSSEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEEC
T ss_pred CCceEEEEEEeCCC---CCCceEEEEEEeCCEEEEEecCccccccCceeeccceeEEEEecCccccccCCCCCeEEEEEc
Confidence 57899999666555 599999999999999984 5566667888888765432 222111 124578999998
Q ss_pred CC------eEEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 289 GD------DSLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 289 ~~------RTy~L~AdS~ee~~eWI~AI~~aIa 315 (334)
++ ++|+|+|+|++++++||+||+.|..
T Consensus 244 ~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak~ 276 (291)
T 3tca_A 244 PQIQKESQYIKYLCCDDARTLSQWVMGIRIAKY 276 (291)
T ss_dssp TTCCSCCTTSEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 65 4699999999999999999998853
No 59
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.65 E-value=1.4e-16 Score=156.72 Aligned_cols=95 Identities=16% Similarity=0.305 Sum_probs=73.8
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEE--eCCeeEE-ecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEE----eC
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTL--SGAHLSY-KGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIF----TG 289 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL--~~~~L~Y-k~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~----T~ 289 (334)
..+++|||.| +|+. .|+||+||||| +++.|+| +++.+.+|.|.|+|..+..+.. ....+++++|+|. ++
T Consensus 145 ~~~keG~L~K-rG~~--~k~WkrRwFVL~~~~~~L~Yy~~~~~~~p~g~I~L~~~~~~~~-~~~~~~~~~f~I~~~~~~~ 220 (386)
T 3lju_X 145 AGYREGFLWK-RGRD--NGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQ-PAKIGHPHGLQVTYLKDNS 220 (386)
T ss_dssp SSEEEEEEEE-ECSS--SCCEEEEEEEEETTTTEEEEEC-----CCSEEEEGGGEEEEEC-HHHHTSTTCEEEEEEETTE
T ss_pred ccccccceee-eccc--cCCceEEEEEEEcCCCEEEEECCCCccCcccEEEeeccEEEEc-ccccCCCceEEEEEecCCC
Confidence 3589999954 5554 69999999999 8999985 5556678999999999866542 2122568899998 77
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 290 DDSLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 290 ~RTy~L~AdS~ee~~eWI~AI~~aIa 315 (334)
.|+|+|+|+|++++++||++|+.+..
T Consensus 221 ~R~y~l~A~s~~e~~~Wi~aIr~a~~ 246 (386)
T 3lju_X 221 TRNIFIYHEDGKEIVDWFNALRAARF 246 (386)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCHHHHHHHHHhhhhccc
Confidence 79999999999999999999998753
No 60
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.64 E-value=1.4e-15 Score=132.17 Aligned_cols=94 Identities=19% Similarity=0.268 Sum_probs=76.2
Q ss_pred eEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCC-----------------------------------CC-----
Q psy17028 219 VIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKE-----------------------------------DK----- 258 (334)
Q Consensus 219 lkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~-----------------------------------~~----- 258 (334)
+|+|||.+|.+ . .+.|++|||||+++.|+|..+.. ..
T Consensus 2 ~k~G~L~~~~~-~--~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~ 78 (150)
T 2fjl_A 2 IKNGILYLEDP-V--NHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREH 78 (150)
T ss_dssp CEEEEEEEEET-T--TTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSS
T ss_pred CcceEEEeecC-C--CCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhc
Confidence 68999966654 4 69999999999999999854110 00
Q ss_pred ----------ccceEEcCCeeEEEecCCCCCCCceEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 259 ----------QETPIDVHRIRSVKVSRGARNIPKAFEIFTGD---DSLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 259 ----------p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~---RTy~L~AdS~ee~~eWI~AI~~aIa 315 (334)
..|.|+|.+|+.+....+..++++.|.|.+++ ++|.|.|+|.++|.+||++|+.|+.
T Consensus 79 l~E~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 79 LDENSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp SCTTTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 16999999997666655555789999999885 4999999999999999999999864
No 61
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=3e-15 Score=128.19 Aligned_cols=97 Identities=12% Similarity=0.259 Sum_probs=75.5
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCCC---CccceEEcCCeeEEEecCCCCCCCceEEEEeCC---
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKED---KQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD--- 290 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~~---~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~--- 290 (334)
.|-+++||+..+.+...+|.||+|||+|+++.|+|++++++ +|.|.|+|.+|+ |.........++.|.+..|.
T Consensus 8 ~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~~~ePig~I~L~gce-V~pd~~~~~~kf~ikl~iPs~~g 86 (137)
T 2ys3_A 8 IPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKGCE-VVPDVNVSGQKFCIKLLVPSPEG 86 (137)
T ss_dssp CCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTTTSCCSCCBCTTTCE-EEECCBGGGTBEEEEEEEECSSS
T ss_pred CcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhccCCCceEEECCCCE-EeccccccCCceEEEEEccCCCC
Confidence 47788999666655556799999999999999996544333 799999999987 54432112445677777653
Q ss_pred -eEEEEEcCCHHHHHHHHHHHHHHH
Q psy17028 291 -DSLILKPKNGKNAEQWVQCLSVVV 314 (334)
Q Consensus 291 -RTy~L~AdS~ee~~eWI~AI~~aI 314 (334)
++|+|.|||++++++||.|++.|.
T Consensus 87 ~r~y~l~cdsEeqy~~WMaA~rlAs 111 (137)
T 2ys3_A 87 MSEIYLRCQDEQQYARWMAGCRLAS 111 (137)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHHHHhc
Confidence 899999999999999999999874
No 62
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=1.2e-14 Score=122.78 Aligned_cols=99 Identities=20% Similarity=0.283 Sum_probs=77.0
Q ss_pred CCCceEEEEeccccC-CCcccCCceeEEEEEeCCe------eEEecCCC-----CCccceEEcCCeeEEEecCCCC---C
Q psy17028 215 DSHPVIEGQLKEKKG-RWKIFKRWRTRYFTLSGAH------LSYKGSKE-----DKQETPIDVHRIRSVKVSRGAR---N 279 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G-~~~~~K~WKrRwFVL~~~~------L~Yk~~~~-----~~p~g~I~L~~~~sV~~~~~~~---~ 279 (334)
++.++++|||...+- ++ .|.||||||+|.++. |-|++.++ ..+.+.|.|++|.+|....++. +
T Consensus 9 ~e~~vk~G~L~~q~q~~f--gkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk 86 (127)
T 2d9w_A 9 GDGAVKQGFLYLQQQQTF--GKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPR 86 (127)
T ss_dssp CCCSSEEEEEEECBCSSS--SCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCS
T ss_pred cCccccceEEEecccchh--hhhhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCC
Confidence 447899999955442 44 677999999999763 44555432 2578999999999998765441 3
Q ss_pred CCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 280 IPKAFEIFTGDDSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 280 k~~~F~I~T~~RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
..++|.|.|++|+|+|.|++. |+++||++|+.+.-.
T Consensus 87 ~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~aF~ 122 (127)
T 2d9w_A 87 DTSAFFLETKERLYLLAAPAA-ERGDWVQAICLLAFS 122 (127)
T ss_dssp SCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHHHTS
T ss_pred cceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHHhcC
Confidence 457999999999999999975 899999999997544
No 63
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.57 E-value=1.7e-15 Score=148.39 Aligned_cols=97 Identities=24% Similarity=0.449 Sum_probs=69.0
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEe-CCeeE-EecCCCCCccceEEcCCeeEE--EecCCCCCCCceEEEEeCCe
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLS-GAHLS-YKGSKEDKQETPIDVHRIRSV--KVSRGARNIPKAFEIFTGDD 291 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~-~~~L~-Yk~~~~~~p~g~I~L~~~~sV--~~~~~~~~k~~~F~I~T~~R 291 (334)
..+++|||| .|+|.. +|+||+|||||+ ++.|. ||+.++..+.|.|+|...+.+ .+...+..++++|.|.+++.
T Consensus 4 ~~v~keG~L-~K~g~~--~k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~ 80 (446)
T 4ejn_A 4 VAIVKEGWL-HKRGEY--IKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQW 80 (446)
T ss_dssp CCEEEEEEE-EEEETT--TTEEEEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEEEEECSSSTTEEEEEEEET
T ss_pred ceEEEEeeE-Eeeccc--cccccceEEEEeeCCEEEEEecCCCCCccCcccccCccccceeecCCCCCCCceeEEEcCCC
Confidence 368999999 555655 699999999997 78887 566666778899999875421 11112235578999998774
Q ss_pred -EE---EEEcCCHHHHHHHHHHHHHHHH
Q psy17028 292 -SL---ILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 292 -Ty---~L~AdS~ee~~eWI~AI~~aIa 315 (334)
++ .|.+++++++++|+.||+.++.
T Consensus 81 ~~~~~r~~~~~~~ee~e~W~~ai~~~i~ 108 (446)
T 4ejn_A 81 TTVIERTFHVETPEEREEWTTAIQTVAD 108 (446)
T ss_dssp TEEEEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred ceeeeeEEecCCHHHHHHHHHHHHhhhh
Confidence 33 7999999999999999999975
No 64
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.52 E-value=1.8e-14 Score=136.65 Aligned_cols=101 Identities=14% Similarity=0.245 Sum_probs=75.9
Q ss_pred CCCceEEEEeccc-------cCCC--cccCCceeEEEEEeCCeeE-EecCCC------CCccceEEcCCeeEEEecCCCC
Q psy17028 215 DSHPVIEGQLKEK-------KGRW--KIFKRWRTRYFTLSGAHLS-YKGSKE------DKQETPIDVHRIRSVKVSRGAR 278 (334)
Q Consensus 215 ~g~vlkeGwLkkK-------~G~~--~~~K~WKrRwFVL~~~~L~-Yk~~~~------~~p~g~I~L~~~~sV~~~~~~~ 278 (334)
.+.+.++|||.+| +++. ...++|++|||||+++.|+ |+++.. ..|.+.|+|.+++.. ...+..
T Consensus 8 ~~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~-~a~d~~ 86 (279)
T 3a8n_A 8 QGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQ-AVPEHP 86 (279)
T ss_dssp --CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEEC-CCTTSS
T ss_pred CCceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEE-eccccC
Confidence 3578899999543 2211 1248999999999999998 666532 357889999997543 233444
Q ss_pred CCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 279 NIPKAFEIFTGD-DSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 279 ~k~~~F~I~T~~-RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
+++++|.|.|++ ++|+|+|+|++||++||++|+.+++.
T Consensus 87 kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~ 125 (279)
T 3a8n_A 87 KKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAA 125 (279)
T ss_dssp SSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 668899999876 68999999999999999999998863
No 65
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.51 E-value=6.1e-14 Score=121.93 Aligned_cols=90 Identities=18% Similarity=0.204 Sum_probs=76.6
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCCeEEEE
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDSLIL 295 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RTy~L 295 (334)
.++++|+|.||+|.+ ||+|||+|++.-.+ |-++.....+|.|+++....|++.. ...|.|.|++|||+|
T Consensus 51 ~Ilk~G~v~KrkGl~-----~kkR~liLT~~PrL~Yvdp~~~~~KGeIpls~~l~ve~k~-----~~~F~I~Tp~RtY~~ 120 (151)
T 1w1g_A 51 LILKMGPVDKRKGLF-----ARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEAKN-----FKTFFVHTPNRTYYL 120 (151)
T ss_dssp CEEEEEEEEEEETTE-----EEEEEEEEETTTEEEEEETTTTEEEEEECCCTTCEEEESS-----SSEEEEEETTEEEEE
T ss_pred cEEEEEEEEecccCc-----ceeEEEEEcCCceEEEEcCccccccceEecCCCeeEEEcC-----CCEEEEECCCceEEE
Confidence 799999997767743 99999999987665 7777666789999999988887743 248999999999999
Q ss_pred EcCCHHHHHHHHHHHHHHHHhh
Q psy17028 296 KPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 296 ~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
.+. ..++++|++||+.++...
T Consensus 121 ~d~-~~~AqeWv~aI~~~~~~~ 141 (151)
T 1w1g_A 121 MDP-SGNAHKWCRKIQEVWRQR 141 (151)
T ss_dssp ECT-TSCHHHHHHHHHHHHHHH
T ss_pred EcC-ccCHHHHHHHHHHHHHHH
Confidence 997 889999999999998753
No 66
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.44 E-value=4.5e-13 Score=112.91 Aligned_cols=100 Identities=15% Similarity=0.268 Sum_probs=83.6
Q ss_pred CCCCceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCC-----CCCCceEEEE
Q psy17028 214 QDSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGA-----RNIPKAFEIF 287 (334)
Q Consensus 214 ~~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~-----~~k~~~F~I~ 287 (334)
+++.+++|||+ .+.+.. -+.|||+|++|+...+. |+++.+.++...|+|+++..|+...+. ...++||+|.
T Consensus 4 ~~s~vlkeGW~-VH~t~~--d~~rKRHYWrLD~K~Itlf~~e~~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~ 80 (125)
T 2coa_A 4 GSSGTLREGWV-VHYSNK--DTLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIV 80 (125)
T ss_dssp CCCSCSEEEEE-EECCSS--SCCCEEEEEEECSSEEEEESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEE
T ss_pred CCCceeecceE-EEEccC--CccccceeeEecCCeEEEEecCCCCceeeeeehhHeecccccccccccCCCCCCceEEEE
Confidence 34579999999 777766 68999999999999998 788888899999999999999875422 1356999999
Q ss_pred eCCeEEEEEcC---C--------HHHHHHHHHHHHHHHHh
Q psy17028 288 TGDDSLILKPK---N--------GKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 288 T~~RTy~L~Ad---S--------~ee~~eWI~AI~~aIa~ 316 (334)
|.+.+|++.++ . .+.+..|..||++|+-.
T Consensus 81 T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALmP 120 (125)
T 2coa_A 81 TANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALMS 120 (125)
T ss_dssp CSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGGG
T ss_pred eCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhccC
Confidence 99999999985 1 26699999999999754
No 67
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.41 E-value=1e-12 Score=123.27 Aligned_cols=97 Identities=15% Similarity=0.222 Sum_probs=73.2
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEEec-CCCCCccce---EEcCCeeEEEecCCC----CCCCceEEEEe
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKG-SKEDKQETP---IDVHRIRSVKVSRGA----RNIPKAFEIFT 288 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~-~~~~~p~g~---I~L~~~~sV~~~~~~----~~k~~~F~I~T 288 (334)
.|.++|||++|+++. |.||+|||+|++++|+|.+ .+.+++.+. ++|++.....+.... ...+++|.|..
T Consensus 131 ~P~~~G~L~~ke~~~---K~WkkRyfvLr~sgLy~~~k~~sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~ 207 (256)
T 3hk0_A 131 SPEIQGFLHVKELGK---KSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKP 207 (256)
T ss_dssp CEEEEEEEEEECTTS---SCEEEEEEEEETTEEEEESSTTCCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEE
T ss_pred CCcceeEEEEecCCC---CcceEEEEEEeCCEEEEEecCCCCccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEc
Confidence 578999997777665 9999999999999998654 333344443 688886544443211 13478999986
Q ss_pred CCe------EEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 289 GDD------SLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 289 ~~R------Ty~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
+.. .++|+|+|++++++||+||+.|...
T Consensus 208 ~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~g 241 (256)
T 3hk0_A 208 NKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYG 241 (256)
T ss_dssp TTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCceEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 543 5999999999999999999998654
No 68
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=3.6e-12 Score=107.75 Aligned_cols=99 Identities=19% Similarity=0.263 Sum_probs=83.1
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCC-----CCCCceEEEEe
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGA-----RNIPKAFEIFT 288 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~-----~~k~~~F~I~T 288 (334)
++.+++|||+ .+.+.. -+.|||+|++|+...+. |.++.+.++...|+|+.+..|+...+. ...++||+|.|
T Consensus 5 ~s~vlkeGWm-VH~t~~--d~~rKRHYWrLD~K~Itlf~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T 81 (129)
T 2d9z_A 5 SSGMVKEGWM-VHYTSR--DNLRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIIT 81 (129)
T ss_dssp CTTSEEEEEE-EEEESS--CCCCEEEEEEEESSCEEEESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEEC
T ss_pred CCceeecceE-EEEccC--CccccceeeEecCCeEEEEecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEEEE
Confidence 4579999999 666665 58899999999999998 788888889999999999988864322 12459999999
Q ss_pred CCeEEEEEcCC---------------HHHHHHHHHHHHHHHHh
Q psy17028 289 GDDSLILKPKN---------------GKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 289 ~~RTy~L~AdS---------------~ee~~eWI~AI~~aIa~ 316 (334)
.+.+|+..++. .+.+..|.+||++|+-.
T Consensus 82 ~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALmP 124 (129)
T 2d9z_A 82 DTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMS 124 (129)
T ss_dssp SSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhccC
Confidence 99999998853 69999999999999854
No 69
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.30 E-value=5.7e-12 Score=119.62 Aligned_cols=97 Identities=19% Similarity=0.213 Sum_probs=69.2
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEEec-CCCCCc---cceEEcCCeeEEEecCC----CCCCCceEEEEe
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKG-SKEDKQ---ETPIDVHRIRSVKVSRG----ARNIPKAFEIFT 288 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~-~~~~~p---~g~I~L~~~~sV~~~~~----~~~k~~~F~I~T 288 (334)
.|.++|||++|+++. |.|+||||+|+++.|+|.. .+...+ .+.++|+++..-.+... ....+++|.|..
T Consensus 157 ~pe~~G~L~~k~~~~---k~WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~ 233 (281)
T 4gmv_A 157 VPEIEGVLWLKDDGK---KSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKH 233 (281)
T ss_dssp CCCCEEEEEEECTTS---SCEEEEEEEECSSCEEEC---------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEEC
T ss_pred CCccEEEEEEECCCC---CCCeEEEEEEeCCEEEEEeCCCCCccccceEEEEcCCcEEEEecccccccCCCCCcEEEEec
Confidence 567999997776665 8999999999999998644 332233 35568887543333211 124579999996
Q ss_pred CC------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 289 GD------DSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 289 ~~------RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
++ ..++|+|+|+++++.||.||+.+...
T Consensus 234 ~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~g 267 (281)
T 4gmv_A 234 PQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYG 267 (281)
T ss_dssp TTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCceEEEEeCCHHHHHHHHHHHHHHhhC
Confidence 43 47999999999999999999998654
No 70
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.13 E-value=2.1e-10 Score=100.96 Aligned_cols=98 Identities=15% Similarity=0.235 Sum_probs=70.6
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCC-C--CCccceEEcCCeeEEEecCCCCCCCceEEEEe----C
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSK-E--DKQETPIDVHRIRSVKVSRGARNIPKAFEIFT----G 289 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~-~--~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T----~ 289 (334)
.|-..+||+.-+.+...+|.||+||||++++.|+|++++ + ..|.+.|+|.+|. |.+.......++.+.+.- +
T Consensus 46 iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~~geP~~~I~LrGCE-VtpDVnva~~Kf~IkL~vP~~~g 124 (173)
T 4f7h_A 46 IPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCE-VTPDVNISGQKFNIKLLIPVAEG 124 (173)
T ss_dssp TTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGCSSCCSEEEECTTCE-EEEEEETTTTEEEEEEEEEETTE
T ss_pred ChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHhcCCCceEEecCceE-EeccccccccceeEEEeccCCCC
Confidence 466889995545554457999999999999999855433 2 4699999999996 433111112234444432 2
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 290 DDSLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 290 ~RTy~L~AdS~ee~~eWI~AI~~aIa 315 (334)
.+.|+|.|+|++++.+|+.|.+-|.+
T Consensus 125 m~e~~Lrcd~E~qya~WMAAcrLAsk 150 (173)
T 4f7h_A 125 MNEIWLRCDNEKQYAHWMAACRLASK 150 (173)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cceeeeecCCHHHHHHHHHHhhhhcc
Confidence 35899999999999999999998854
No 71
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.08 E-value=3.5e-10 Score=98.78 Aligned_cols=98 Identities=9% Similarity=0.201 Sum_probs=66.6
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecCCC--CCccceEEcCCeeEEEecCCCCCCCceEEEEeC----
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGSKE--DKQETPIDVHRIRSVKVSRGARNIPKAFEIFTG---- 289 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~~~--~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~---- 289 (334)
.|-..|||+.-+.+...+|.||+||||+++..|+| |+..+ ..|.+.|+|.+|. |.+.-......+.|.+.-+
T Consensus 25 iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~~geP~~~inLrGCE-VtPDVnva~~Kf~ikL~ip~~~g 103 (165)
T 4bbk_A 25 IPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELEQGEPIEKLNLRGCE-IVPDVNVSGRKFGIKLLIPVADG 103 (165)
T ss_dssp -CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGTTSCCSEEEECTTCE-EEEEEETTTTEEEEEEEEEETTE
T ss_pred ChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHhcCCCceEEecCccE-EecccccccceeeEEEecCCCCc
Confidence 46788999554554445799999999999999984 44332 4699999999985 4321111123456665433
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 290 DDSLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 290 ~RTy~L~AdS~ee~~eWI~AI~~aIa 315 (334)
...++|.++|+++..+|+.|++-|..
T Consensus 104 m~e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 104 MNEVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred ceeeeeecCCHHHHHHHHHHhhhccc
Confidence 24899999999999999999998854
No 72
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.60 E-value=1.7e-07 Score=79.65 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=75.2
Q ss_pred CceEEEEeccccCCC-----cccCCceeEEEEEeCC-----eeE-Eec-CCCCCccceEEcCCeeEEEecCCC--CCCCc
Q psy17028 217 HPVIEGQLKEKKGRW-----KIFKRWRTRYFTLSGA-----HLS-YKG-SKEDKQETPIDVHRIRSVKVSRGA--RNIPK 282 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~-----~~~K~WKrRwFVL~~~-----~L~-Yk~-~~~~~p~g~I~L~~~~sV~~~~~~--~~k~~ 282 (334)
.+++||.|..=.|.. ..-..|.|+|++|+.. .+. |+. .+..+|+..|++..+..|...... ....|
T Consensus 17 e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~~i~cs~I~EVR~tt~LEmPD~~n 96 (136)
T 1v5m_A 17 DIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKDN 96 (136)
T ss_dssp SCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTCCBCCCCCCSSSCCCTT
T ss_pred eeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCcccCCccccchhhhhhhhhccccccCCccc
Confidence 678898884333321 0125799999999753 343 555 566789999999999877642221 23468
Q ss_pred eEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 283 AFEIFTGDD-SLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 283 ~F~I~T~~R-Ty~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
.|.|.+.++ .|+|.|.|+.+++.|++.|+.++..
T Consensus 97 TFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~ 131 (136)
T 1v5m_A 97 TFVLKVENGAEYILETIDSLQKHSWVADIQGCVDS 131 (136)
T ss_dssp EECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 999999998 7999999999999999999999865
No 73
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=98.55 E-value=2.9e-07 Score=84.37 Aligned_cols=94 Identities=17% Similarity=0.370 Sum_probs=74.6
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeC-----Cee--E-EecCC----CCCccceEEcCCeeEEEecCCCCCCCceE
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSG-----AHL--S-YKGSK----EDKQETPIDVHRIRSVKVSRGARNIPKAF 284 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~-----~~L--~-Yk~~~----~~~p~g~I~L~~~~sV~~~~~~~~k~~~F 284 (334)
.++.||+.|.+.| |.||+||+||+. +.+ . ||+.+ ..+++.+|.|..+..++..-.-.++.+.+
T Consensus 8 ~~v~eg~vk~r~~-----KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~GlE~g~~ldk~s~Tl 82 (224)
T 3ml4_A 8 AALVEGQVKLRDG-----KKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGLEPALPYEGLAHTL 82 (224)
T ss_dssp CCSEEEEEEEC--------CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEEEEEEEETTEEEEE
T ss_pred ceeEEEeeeeecC-----CceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCccccccccCcccEE
Confidence 5689999977776 459999999986 233 3 98864 35678899999998888644334567899
Q ss_pred EEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 285 EIFTGDDSLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 285 ~I~T~~RTy~L~AdS~ee~~eWI~AI~~aIa 315 (334)
.|++.+.++.|..|+.+++.+|-..|+..+.
T Consensus 83 AIIc~d~~~vLAFds~e~l~~W~~~l~~slG 113 (224)
T 3ml4_A 83 AIICLSQAVMLGFDSHEAMCAWDTRIRYALG 113 (224)
T ss_dssp EEEESSCEEEEECSSHHHHHHHHHHHHHHTS
T ss_pred EEEecCcEEEEEeCCHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999987654
No 74
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.36 E-value=4.2e-06 Score=68.88 Aligned_cols=97 Identities=15% Similarity=0.165 Sum_probs=69.8
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecC---CCC--CccceEEcCCeeEEEecCCCCCCCceEEEEeCCe
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGS---KED--KQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDD 291 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~---~~~--~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~R 291 (334)
..++||-| .|-..- ..+-=++++|.|=++.|.|-.. +.. .-...++|.++..+.+.+. ...+++|.|.+..+
T Consensus 7 ~lv~eG~l-~el~~~-~~k~~~~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~d~-~~~~n~f~i~~~~~ 83 (113)
T 1zc3_B 7 YLVYNGDL-VEYEAD-HMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDN-PPMKDMFKLLMFPE 83 (113)
T ss_dssp CEEEEEEE-EEEETT-TCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCB-TTBSSEEEEEETTE
T ss_pred EEEEeCcE-EEEccc-cCCCCccEEEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEEECCCC-cccceEEEEEeCCc
Confidence 57889998 432210 0111256889999999976332 211 2345689999876666443 24578999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 292 SLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 292 Ty~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
++.++|+|.+|..+|+.+|+.++..
T Consensus 84 s~~~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 84 SRIFQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999854
No 75
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.27 E-value=2.5e-06 Score=72.41 Aligned_cols=98 Identities=15% Similarity=0.256 Sum_probs=71.5
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEec-CCC--C-CccceEEcCCeeEEEecCCCCCCCceEEEEeCC-
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKG-SKE--D-KQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD- 290 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~-~~~--~-~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~- 290 (334)
|.++.-|....+-|.. +.=+.|||+|-++.|.|-. +.. . .-.|.|+|++....+. ++..+.+++|+|..+.
T Consensus 26 G~ii~~s~v~~~~~~~---~~~~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~~V~~~-ed~~~~~~aFeI~g~~~ 101 (132)
T 1v61_A 26 GNVIFMSQVVMQHGAC---EEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRL-DEIEGSDCMFEITGSTV 101 (132)
T ss_dssp CCCSCEEEEEBCCSSS---SCCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTCBCSTT-CSSSSSCCCEEEECSSS
T ss_pred CCeEEEeeEEEEEccc---CcceEEEEEEcCCeEEEEEecCCCceEEEEEEEecceeEEEec-cccccCccEEEEecCCC
Confidence 4555555553554432 3347899999999998643 321 2 3669999999764333 2223568999999877
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 291 DSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 291 RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
+++.+.|.|.+|+++|+.+|+.+++.+
T Consensus 102 ~~i~v~~~s~eE~~~Wl~~L~~~i~~~ 128 (132)
T 1v61_A 102 ERIVVHCNNNQDFQEWMEQLNRLTKSG 128 (132)
T ss_dssp CEEEECCCCSHHHHHHHHHHHHHHTTS
T ss_pred ceEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence 899999999999999999999998874
No 76
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=98.26 E-value=2.9e-06 Score=71.08 Aligned_cols=80 Identities=21% Similarity=0.405 Sum_probs=62.0
Q ss_pred eeEEEEEeCCeeE-Eec-C--CCCCccceEEcCCeeEEEecCC---------CCCCCceEEEEeCC--eEEEEEcCCHHH
Q psy17028 238 RTRYFTLSGAHLS-YKG-S--KEDKQETPIDVHRIRSVKVSRG---------ARNIPKAFEIFTGD--DSLILKPKNGKN 302 (334)
Q Consensus 238 KrRwFVL~~~~L~-Yk~-~--~~~~p~g~I~L~~~~sV~~~~~---------~~~k~~~F~I~T~~--RTy~L~AdS~ee 302 (334)
|.|||.|+++... |.. . ......+.|+|+++..|..+.. +.....+|.|...+ ++..|.|+|+++
T Consensus 29 k~r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~k~LdlvA~s~~e 108 (131)
T 1mai_A 29 RERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSPAD 108 (131)
T ss_dssp EEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSCCCEEEECSSHHH
T ss_pred eeEEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCCCceEEEEeCCHHH
Confidence 7899999988765 443 1 1234679999999999987531 11346799998887 599999999999
Q ss_pred HHHHHHHHHHHHHhh
Q psy17028 303 AEQWVQCLSVVVAHS 317 (334)
Q Consensus 303 ~~eWI~AI~~aIa~~ 317 (334)
++.|+..|+..++..
T Consensus 109 ~~~Wv~gL~~L~~~~ 123 (131)
T 1mai_A 109 AQHWVQGLRKIIHHS 123 (131)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998764
No 77
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=98.13 E-value=6e-06 Score=80.79 Aligned_cols=97 Identities=24% Similarity=0.399 Sum_probs=66.8
Q ss_pred CCC-CceEEEEeccccCCCcccCCceeEEEEEeCCeeEEec-CCCC--CccceEEcCCeeEEEecCCCCCCCceEEEEeC
Q psy17028 214 QDS-HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKG-SKED--KQETPIDVHRIRSVKVSRGARNIPKAFEIFTG 289 (334)
Q Consensus 214 ~~g-~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~-~~~~--~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~ 289 (334)
.++ ..+++|.|.+..+ +.++.|||.|-++.|.|-+ .++. ...+.|+|..+...+..+ ...++.|.|.++
T Consensus 239 ~~~r~li~~g~l~~~~~-----~~~~~r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L~~l~v~~~~~--~~~~~~f~i~~~ 311 (434)
T 3mpx_A 239 QPGREFLKEGTLMKVTG-----KNRRPRHLFLMNDVLLYTYPQKDGKYRLKNTLAVANMKVSRPVM--EKVPYALKIETS 311 (434)
T ss_dssp CTTCCEEECCEEEEEET-----TEEEEEEEEEESSEEEEEEECTTSCEEEEEEEEC-----CCCCC--TTSCSEEEEECS
T ss_pred cCCcceEecceEEEEeC-----CCceEEEEEEECCEEEEEEecCCCeEEEEEEEEcCCcEEEecCC--CCCCeeEEEecC
Confidence 444 5688999944333 3479999999999998533 3222 256788888764322222 245789999999
Q ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 290 DDSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 290 ~RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
+++|.|+|.|++++++|+++|+.+|...
T Consensus 312 ~~~~~l~a~s~~ek~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 312 ESCLMLSASSCAERDEWYGCLSRALPED 339 (434)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHC----
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999764
No 78
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=98.05 E-value=2.5e-05 Score=76.03 Aligned_cols=104 Identities=17% Similarity=0.285 Sum_probs=72.9
Q ss_pred CCCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCCC--CccceEEcCCeeEEEecCCC---CCCCceEEEEe
Q psy17028 214 QDSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKED--KQETPIDVHRIRSVKVSRGA---RNIPKAFEIFT 288 (334)
Q Consensus 214 ~~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~~--~p~g~I~L~~~~sV~~~~~~---~~k~~~F~I~T 288 (334)
..|..+++|.|....+.. +.++.||+.|=++.|.|-+.++. ...+.|+|..+......+++ ...++.|.|..
T Consensus 230 ~~grli~~G~l~~~~~~~---~~~~~~~~fLF~d~Ll~~k~k~~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~ 306 (406)
T 2vrw_B 230 NYGRPKIDGELKITSVER---RSKTDRYAFLLDKALLICKRRGDSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIE 306 (406)
T ss_dssp GGCSEEEEEEEEEECSSC---CSCEEEEEEEESSEEEEEEEETTEEEEEEEEETTTEEEEC--------CTTCEEEEEEE
T ss_pred ccCcccccccEEEEecCC---CccceEEEEecCCEEEEEEecCCceEEEEEecccceeeeecCCCCccCCccceeeEEEe
Confidence 446788999995544332 56799999999999875332222 25678899886533332221 12358999987
Q ss_pred --CCeEEEEEcCCHHHHHHHHHHHHHHHHhhccc
Q psy17028 289 --GDDSLILKPKNGKNAEQWVQCLSVVVAHSQAK 320 (334)
Q Consensus 289 --~~RTy~L~AdS~ee~~eWI~AI~~aIa~~~~k 320 (334)
++++|.|.|.|++++++|+++|+.++.....+
T Consensus 307 ~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~ 340 (406)
T 2vrw_B 307 DQGAQGYELFFKTRELKKKWMEQFEMAISNIYPE 340 (406)
T ss_dssp TTCSCEEEEEESSHHHHHHHHHHHHHHHHHHSCT
T ss_pred cCCCceEEEeCCCHHHHHHHHHHHHHHHhhhhhc
Confidence 45799999999999999999999999875433
No 79
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=97.98 E-value=2.9e-05 Score=79.49 Aligned_cols=106 Identities=16% Similarity=0.246 Sum_probs=75.7
Q ss_pred ccCCCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCCC--CccceEEcCCeeEEEecCCC---CCCCceEEE
Q psy17028 212 FLQDSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKED--KQETPIDVHRIRSVKVSRGA---RNIPKAFEI 286 (334)
Q Consensus 212 ~~~~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~~--~p~g~I~L~~~~sV~~~~~~---~~k~~~F~I 286 (334)
+...|..+++|.|..+.+.. +.++.||+.|=++.|.|-+.++. ...+.|+|..+...+..+++ ...++.|.|
T Consensus 400 l~~~grll~~G~l~~~~~~~---~~~~~r~~fLF~d~Ll~~k~~~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i 476 (587)
T 3ky9_A 400 LAHYGRPKIDGELKITSVER---RSKMDRYAFLLDKALLICKRRGDSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLL 476 (587)
T ss_dssp GGGGCCEEEEEEEEEECSSC---CSCEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEE
T ss_pred hhhcCceEEEeeEEEEeccC---CCcceEEEEEECCEEEEEEecCCEEEeeeeechhhceeeecCCCCcccccccceeEE
Confidence 33456789999996554443 66899999999999975332222 36788999987654443221 234689999
Q ss_pred EeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhhccc
Q psy17028 287 FTGD--DSLILKPKNGKNAEQWVQCLSVVVAHSQAK 320 (334)
Q Consensus 287 ~T~~--RTy~L~AdS~ee~~eWI~AI~~aIa~~~~k 320 (334)
...+ ++|.|.|.|.+++++|+++|+.++.....+
T Consensus 477 ~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~~~ 512 (587)
T 3ky9_A 477 IEDQGAQGYELFFKTRELKKKWMEQFEMAISNIYPE 512 (587)
T ss_dssp EETTC---CEEEESSHHHHHHHHHHHHHHHHHHSCT
T ss_pred EEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhccc
Confidence 9876 799999999999999999999999765433
No 80
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.90 E-value=9.4e-05 Score=72.01 Aligned_cols=96 Identities=14% Similarity=0.155 Sum_probs=67.2
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCCC-------------------CccceEEcCCeeEEEecC
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKED-------------------KQETPIDVHRIRSVKVSR 275 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~~-------------------~p~g~I~L~~~~sV~~~~ 275 (334)
.+..+++|.|..+.++ +.|+.||+.|=++.|.|-+.+++ .-...|+|..+..-++ .
T Consensus 292 ~r~li~eG~l~~~~~~----~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~-~ 366 (418)
T 3t06_A 292 TRKMIHEGPLTWRISK----DKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSV-A 366 (418)
T ss_dssp GSCEEEEEEEEECCBT----TBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEEC-S
T ss_pred cceeEEeceEEEEeCC----CCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceeccc-c
Confidence 3578999999544433 45899999999999874321111 1235788887643222 2
Q ss_pred CCCCCCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q psy17028 276 GARNIPKAFEIFTG-----DDSLILKPKNGKNAEQWVQCLSVVVAHSQ 318 (334)
Q Consensus 276 ~~~~k~~~F~I~T~-----~RTy~L~AdS~ee~~eWI~AI~~aIa~~~ 318 (334)
+.++.|.|... .++|.|+|.|.++++.|+++|+.+++..+
T Consensus 367 ---~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~~ 411 (418)
T 3t06_A 367 ---TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNAH 411 (418)
T ss_dssp ---SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC-
T ss_pred ---ccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcCc
Confidence 23457777653 27999999999999999999999998743
No 81
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.88 E-value=1.3e-05 Score=72.88 Aligned_cols=35 Identities=17% Similarity=0.401 Sum_probs=27.6
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEec
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKG 253 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~ 253 (334)
+.|-++|||.+| |+. +|+||+|||||+++.|.|..
T Consensus 19 ~~~~~~g~l~~~-~~~--~~~w~~rw~vl~~~~~~~~~ 53 (228)
T 3tfm_A 19 GSPYFHSFLYMN-GGL--MNSWKRRWCVLKDETFLWFR 53 (228)
T ss_dssp --CCEEEEEEEC-CTT--TCCCEEEEEEEETTEEEEES
T ss_pred CCCceEEEEeec-Ccc--cccceEEEEEEeCCEEEEec
Confidence 478999999655 444 69999999999999998544
No 82
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.86 E-value=9.6e-05 Score=65.56 Aligned_cols=100 Identities=18% Similarity=0.258 Sum_probs=68.4
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCCCC--------ccceEEcCCeeEEE-ecCCCCCCCceEE
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKEDK--------QETPIDVHRIRSVK-VSRGARNIPKAFE 285 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~~~--------p~g~I~L~~~~sV~-~~~~~~~k~~~F~ 285 (334)
.+..+++|-|..|.++ +.|+.||+.|=++-|.|-..++.+ ....|+|..+. |. +.. ..+..|.
T Consensus 68 ~R~Ll~eG~L~~k~~~----~~~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pvi~L~~~~-vre~a~---d~~~~fl 139 (185)
T 2lg1_A 68 RKKLVRDGSVFLKNAA----GRLKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLKKLI-VREVAH---EEKGLFL 139 (185)
T ss_dssp TSCEEEEEEEEEECTT----CCEEEEEEEEESSEEECCEEETTEEECCCCSSSCSEEESSSCE-EECCSS---CSSEEEE
T ss_pred CCceeeeceEEEeccC----CCeeeEEEEeecCEEEEEEecCCEEEEEcccCCCCeEeecceE-EeccCC---CCCeEEE
Confidence 4578999999545543 458999999999988642211111 12457777764 33 222 2233455
Q ss_pred EEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHhhccccC
Q psy17028 286 IFTG---DDSLILKPKNGKNAEQWVQCLSVVVAHSQAKEM 322 (334)
Q Consensus 286 I~T~---~RTy~L~AdS~ee~~eWI~AI~~aIa~~~~ke~ 322 (334)
|.+. .+.|.|.|.|.+|++.|+++|+.|+...+.+|.
T Consensus 140 i~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~~~~~ 179 (185)
T 2lg1_A 140 ISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTLNRDED 179 (185)
T ss_dssp ECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred EEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhCChhhh
Confidence 5443 368999999999999999999999988765554
No 83
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=97.85 E-value=0.00011 Score=70.07 Aligned_cols=93 Identities=18% Similarity=0.307 Sum_probs=69.3
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecCC---------CC--CccceEEcCCeeEEEecCCCCCCCce
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGSK---------ED--KQETPIDVHRIRSVKVSRGARNIPKA 283 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~~---------~~--~p~g~I~L~~~~sV~~~~~~~~k~~~ 283 (334)
+..+++|.|.+ .| .++.|+|.|=++.|.| +... .. ...+.|+|..+......++ ...+++
T Consensus 245 r~li~eG~l~~-~g------~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~-~~~~~~ 316 (354)
T 1dbh_A 245 NEFIMEGTLTR-VG------AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDT-NEYKHA 316 (354)
T ss_dssp CCEEEEEEEEE-TT------CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCS-SSCCSE
T ss_pred ceEEEEeeEEE-Ee------cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCcc-cccCcc
Confidence 46899999944 44 2689999999998864 3221 01 1357899998764444332 245789
Q ss_pred EEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 284 FEIFTGD-DSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 284 F~I~T~~-RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
|.|.+.+ ++|.|+|.|++++++|+++|+.+...
T Consensus 317 F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~~ 350 (354)
T 1dbh_A 317 FEIILKDENSVIFSAKSAEEKNNWMAALISLQYR 350 (354)
T ss_dssp EEECCTTSCCEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred EEEecCCCCEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 9999886 89999999999999999999998654
No 84
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=97.84 E-value=0.00013 Score=72.26 Aligned_cols=101 Identities=22% Similarity=0.389 Sum_probs=73.0
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecC--CCC--CccceEEcCCeeEEEecCCCC-----CCCceE
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGS--KED--KQETPIDVHRIRSVKVSRGAR-----NIPKAF 284 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~--~~~--~p~g~I~L~~~~sV~~~~~~~-----~k~~~F 284 (334)
.+..+++|.|.+..+.. +.++.|||.|=++.|.| +.. ... ...+.|+|..+....+.+++. ..+++|
T Consensus 331 ~r~li~~G~l~~~~~~~---~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F 407 (466)
T 2pz1_A 331 SSELIYSGELTRVTQPQ---AKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAF 407 (466)
T ss_dssp CSCEEEEEEEEEECTTT---CCEEEEEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEE
T ss_pred cceeEEeeeEEEEecCC---CCeeEEEEEEECCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeE
Confidence 34689999995444322 45789999999999975 322 111 246889999876555433221 235799
Q ss_pred EEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q psy17028 285 EIFTG--DDSLILKPKNGKNAEQWVQCLSVVVAHSQ 318 (334)
Q Consensus 285 ~I~T~--~RTy~L~AdS~ee~~eWI~AI~~aIa~~~ 318 (334)
.|... .++|.|+|.|++++++|+++|+.++...+
T Consensus 408 ~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~ 443 (466)
T 2pz1_A 408 RLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQ 443 (466)
T ss_dssp EEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 99876 46899999999999999999999987743
No 85
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.81 E-value=0.00019 Score=68.54 Aligned_cols=94 Identities=14% Similarity=0.169 Sum_probs=66.6
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecCCCC------------------CccceEEcCCeeEEEecC
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGSKED------------------KQETPIDVHRIRSVKVSR 275 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~~~~------------------~p~g~I~L~~~~sV~~~~ 275 (334)
.+..+++|.|..+.++ +.++.||+.|=++.|.| +...+. .-.+.|+|+.+. |....
T Consensus 250 ~R~li~~G~l~~~~~~----~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~-v~~~~ 324 (368)
T 1xcg_A 250 TRKMIHEGPLTWRISK----DKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVL-IRSVA 324 (368)
T ss_dssp GSCEEEEEEEEECCSS----SCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEE-EEECS
T ss_pred cceEEeecceEeeecC----CCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEcccee-eeccc
Confidence 3578999999544332 45899999999998874 222110 124678888764 33212
Q ss_pred CCCCCCceEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 276 GARNIPKAFEIFTG-----DDSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 276 ~~~~k~~~F~I~T~-----~RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
+.+++|.|.+. .++|.|+|.|++++++|+++|+.||..
T Consensus 325 ---~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 325 ---TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp ---SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 23468887754 468999999999999999999999865
No 86
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=97.77 E-value=0.00016 Score=70.58 Aligned_cols=100 Identities=15% Similarity=0.263 Sum_probs=71.8
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecCC--CC--CccceEEcCCeeEEEecCCCC-----CCCceE
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGSK--ED--KQETPIDVHRIRSVKVSRGAR-----NIPKAF 284 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~~--~~--~p~g~I~L~~~~sV~~~~~~~-----~k~~~F 284 (334)
.+..+++|.|.+..+.. +.++.|||.|=++.|.| +... .. .-.+.|+|..+......+++. ..+++|
T Consensus 254 ~r~Li~~G~l~~~~~~~---~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F 330 (402)
T 2dfk_A 254 SSELIYTGEMAWIYQPY---GRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAF 330 (402)
T ss_dssp CCCEEEEEEEEEESSTT---CCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEE
T ss_pred ccceEEeceEEEEeccC---CceEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccceEEEecCCCCccccccccceeE
Confidence 34789999995444322 45799999999999875 3221 11 245789998875444433211 225799
Q ss_pred EEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 285 EIFTG--DDSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 285 ~I~T~--~RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
.|... +++|.|+|.|++++++|+++|+.++...
T Consensus 331 ~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~ 365 (402)
T 2dfk_A 331 KLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMV 365 (402)
T ss_dssp EEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 99876 4689999999999999999999988764
No 87
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=97.71 E-value=0.00021 Score=66.98 Aligned_cols=99 Identities=12% Similarity=0.273 Sum_probs=69.7
Q ss_pred CCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEec---CC-CC---CccceEEcCCeeEEEecCCCCCCCceEEEE
Q psy17028 215 DSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKG---SK-ED---KQETPIDVHRIRSVKVSRGARNIPKAFEIF 287 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~---~~-~~---~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~ 287 (334)
.|..+.+|.+....|+. ..+..+.|+|.|=++.|.|-+ .. .. ...+.|+|+.+...+..+ +.++.|.|.
T Consensus 200 ~g~li~~~~~~~~~~~~-~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~~---~~~~~F~i~ 275 (311)
T 1nty_A 200 QGELILQESFQVWDPKT-LIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVE---GDPCKFALW 275 (311)
T ss_dssp GCCEEEEEEEEEECSSS-SSCCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCCT---TCTTEEEEE
T ss_pred cCCceeeeeEEEEcCcc-cccccceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEccC---CCCceEEEE
Confidence 45677888774444431 146689999999999987522 11 11 135778888764332222 346899998
Q ss_pred e-----CCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 288 T-----GDDSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 288 T-----~~RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
. ++.+|.|+|.|++++++|+++|+.+|.++
T Consensus 276 ~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~ 310 (311)
T 1nty_A 276 VGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER 310 (311)
T ss_dssp ESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence 7 34689999999999999999999999763
No 88
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.59 E-value=0.00059 Score=58.48 Aligned_cols=80 Identities=11% Similarity=0.108 Sum_probs=61.3
Q ss_pred ceeEEEEEeCCeeEEec----CC-C--CCccceEEcCCeeEEEecCCCCCCCceEEEEeCC------eEEEEEcCCHHHH
Q psy17028 237 WRTRYFTLSGAHLSYKG----SK-E--DKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD------DSLILKPKNGKNA 303 (334)
Q Consensus 237 WKrRwFVL~~~~L~Yk~----~~-~--~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~------RTy~L~AdS~ee~ 303 (334)
=+.|+|-|=++-|.|-+ .+ . -...+.++|.+......... .-|++|.|..+. +++.|+|+|..|+
T Consensus 33 ~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~e--~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER 110 (140)
T 3qwm_A 33 LHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQ--YYPNGIRLTSSVPGADIKVLINFNAPNPQDR 110 (140)
T ss_dssp TTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECCS--SCTTEEEEEECCTTSCCEEEEEEECSSHHHH
T ss_pred ccceEEEEecchhhheeecccCCCCCceEEEEEeeecceEEEcccCC--CCceEEEEEecCCCCcceEEEEEECCCHHHH
Confidence 48999999999988643 11 1 24678899998754444322 468999998753 6799999999999
Q ss_pred HHHHHHHHHHHHhhc
Q psy17028 304 EQWVQCLSVVVAHSQ 318 (334)
Q Consensus 304 ~eWI~AI~~aIa~~~ 318 (334)
.+||.+|+.+|+..+
T Consensus 111 ~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 111 KKFTDDLRESIAEVQ 125 (140)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998643
No 89
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=97.58 E-value=9.4e-06 Score=80.56 Aligned_cols=95 Identities=19% Similarity=0.115 Sum_probs=0.0
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecC-CCC-------------------CccceEEcCCeeEEEecC
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGS-KED-------------------KQETPIDVHRIRSVKVSR 275 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~-~~~-------------------~p~g~I~L~~~~sV~~~~ 275 (334)
+..+++|.|. |. +.++.|||.|=++.|.|-+. +.. --.+.|+|+.+....+ .
T Consensus 251 r~li~eG~l~-~~------~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~-~ 322 (510)
T 3jzy_A 251 RKLLHSGKLY-KT------KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLP-T 322 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeEEeceEE-Ec------CCCcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEecc-C
Confidence 4678899983 33 34689999999998875331 111 0145677776532222 2
Q ss_pred CCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q psy17028 276 GARNIPKAFEIFTGDDSLILKPKNGKNAEQWVQCLSVVVAHSQ 318 (334)
Q Consensus 276 ~~~~k~~~F~I~T~~RTy~L~AdS~ee~~eWI~AI~~aIa~~~ 318 (334)
+..+.+++|.|.+++++|.|+|.|.+++++|+++|+.++....
T Consensus 323 d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 365 (510)
T 3jzy_A 323 DPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYI 365 (510)
T ss_dssp -------------------------------------------
T ss_pred CCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 2235578999999999999999999999999999999987643
No 90
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.56 E-value=0.00046 Score=66.04 Aligned_cols=94 Identities=11% Similarity=0.126 Sum_probs=64.6
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCCCC-------------------ccceEEcCCeeEEEecCC
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKEDK-------------------QETPIDVHRIRSVKVSRG 276 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~~~-------------------p~g~I~L~~~~sV~~~~~ 276 (334)
+..+++|.|..+.++ +.|+.|||.|=++.|.|-+.++++ ....|+|..+. |+...+
T Consensus 257 r~li~eG~l~~~~~~----~~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~-v~e~~~ 331 (377)
T 3p6a_A 257 KKLVHEGPLTWRVTK----DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAM-TREVAT 331 (377)
T ss_dssp SCEEEEEEEEEESSS----SCEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEE-EEECTT
T ss_pred ceEEEECCcEEEecC----CCeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhh-cccccc
Confidence 578999999555443 468999999999998643211110 12358887763 322222
Q ss_pred CCCCCceEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 277 ARNIPKAFEIFT---GDDSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 277 ~~~k~~~F~I~T---~~RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
.....|.|.+ +...|.|.|.|.+|++.|++.|+.|++.
T Consensus 332 --~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~ 372 (377)
T 3p6a_A 332 --DHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGS 372 (377)
T ss_dssp --CTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred --ccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHh
Confidence 2234566655 3468999999999999999999999876
No 91
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.54 E-value=0.00034 Score=67.37 Aligned_cols=95 Identities=17% Similarity=0.145 Sum_probs=65.6
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCCC-------------------CccceEEcCCeeEEEecCC
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKED-------------------KQETPIDVHRIRSVKVSRG 276 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~~-------------------~p~g~I~L~~~~sV~~~~~ 276 (334)
+..+++|.|..+.++ +.++.||+.|=++.|.|-+.+++ ...+.|+|..+. |....+
T Consensus 255 R~li~eG~l~~~~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~-v~~~~~ 329 (385)
T 1txd_A 255 RKMIHEGPLVWKVNR----DKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVL-VRQVAT 329 (385)
T ss_dssp SCEEEEEEEEEESSS----SCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEE-EEECCC
T ss_pred ceEEEECcEEEEcCC----CCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceeccccc-cccccc
Confidence 478999999544332 45799999999998864221111 124678888764 332222
Q ss_pred CCCCCceEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 277 ARNIPKAFEIFTG---DDSLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 277 ~~~k~~~F~I~T~---~RTy~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
..+..|.|... .++|.|+|.|++++++|+++|+.++...
T Consensus 330 --d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~ 371 (385)
T 1txd_A 330 --DNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASV 371 (385)
T ss_dssp ---CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred --CCceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 22356776653 4689999999999999999999998764
No 92
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=97.54 E-value=0.00071 Score=64.74 Aligned_cols=100 Identities=16% Similarity=0.262 Sum_probs=67.2
Q ss_pred CCCCceEEEEecc----ccCC--Ccc--cCCceeEEEEEeCCeeEE-ecC--CC----C----CccceEEcCCeeEEEec
Q psy17028 214 QDSHPVIEGQLKE----KKGR--WKI--FKRWRTRYFTLSGAHLSY-KGS--KE----D----KQETPIDVHRIRSVKVS 274 (334)
Q Consensus 214 ~~g~vlkeGwLkk----K~G~--~~~--~K~WKrRwFVL~~~~L~Y-k~~--~~----~----~p~g~I~L~~~~sV~~~ 274 (334)
..|..+++|.+.. |.|. .+. ...++.|++.|=++.|.| +.. .+ . .-.+.|+|..+...+..
T Consensus 206 ~~g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~ 285 (353)
T 1kz7_A 206 DLGKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENV 285 (353)
T ss_dssp GGCCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCB
T ss_pred HhhhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcC
Confidence 3467889999843 3331 100 124789999999999864 221 11 1 13467888776433222
Q ss_pred CCCCCCCceEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 275 RGARNIPKAFEIFTG--DDSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 275 ~~~~~k~~~F~I~T~--~RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
+ +.++.|.|... .++|.|+|.|++++++|+++|+.+|..
T Consensus 286 ~---~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 326 (353)
T 1kz7_A 286 K---GDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTS 326 (353)
T ss_dssp T---TBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred C---CCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 2 34689999874 468999999999999999999998864
No 93
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=97.53 E-value=0.00037 Score=66.09 Aligned_cols=90 Identities=18% Similarity=0.318 Sum_probs=63.7
Q ss_pred CceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecC--CCCC-----ccceEEcCCeeEEEecCCC------------
Q psy17028 217 HPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGS--KEDK-----QETPIDVHRIRSVKVSRGA------------ 277 (334)
Q Consensus 217 ~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~--~~~~-----p~g~I~L~~~~sV~~~~~~------------ 277 (334)
..+++|.|++++| +.|++.|=++.|.|-+. ..+. -.+.|+|..+......+++
T Consensus 231 ~li~~G~l~~~~~--------~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~ 302 (346)
T 2z0q_A 231 VLCCHGELKNNRG--------VKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFS 302 (346)
T ss_dssp CEEEEEEEEETTS--------CEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCS
T ss_pred EEEEeceeEECCC--------cEEEEEECCCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCcccccccc
Confidence 5689999944322 68899999998874321 1111 3567999887544333321
Q ss_pred --CCCCceEEEEeC----CeEEEEEcCCHHHHHHHHHHHHHHH
Q psy17028 278 --RNIPKAFEIFTG----DDSLILKPKNGKNAEQWVQCLSVVV 314 (334)
Q Consensus 278 --~~k~~~F~I~T~----~RTy~L~AdS~ee~~eWI~AI~~aI 314 (334)
...+++|.|... +++|.|+|.|++++++|+++|+.|+
T Consensus 303 ~~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 303 NNERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp HHHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 013579999853 5799999999999999999999986
No 94
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=97.50 E-value=0.00082 Score=70.72 Aligned_cols=97 Identities=19% Similarity=0.368 Sum_probs=69.0
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCC-eEEE
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD-DSLI 294 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~-RTy~ 294 (334)
+.+++.|++.+.+|-+ ...|++|+|.|.++.+....+.. .+...+.+..+..|.... .....+|.+.+.+ ++|+
T Consensus 557 ~~~i~~G~~~k~~g~f--~~~~~rR~~~l~p~r~e~~~e~~-~~~~l~~~~~v~~v~k~~--i~~~~~l~~~~k~~k~f~ 631 (689)
T 3v5w_A 557 KDCIMHGYMSKMGNPF--LTQWQRRYFYLFPNRLEWRGEGE-APQSLLTMEEIQSVEETQ--IKERKCLLLKIRGGKQFI 631 (689)
T ss_dssp SCCCEEEEEEEC---------CEEEEEEEETTEEEEECTTS-CCCEEEEGGGEEEEEEEE--SSSCEEEEEEETTTEEEE
T ss_pred CcceeecccccCCCcc--cchhhhhccccCCCcccccccCC-CCcceeeeccccccccCc--CCCCcceeeeecCCcEEE
Confidence 3688999995555544 67899999999999998766543 444678888877664322 2234578887665 7899
Q ss_pred EEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 295 LKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 295 L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
+.+.|..++++|..+|+.+-..+
T Consensus 632 ~~t~~~~~~~~W~~~i~~~~~~~ 654 (689)
T 3v5w_A 632 LQCDSDPELVQWKKELRDAYREA 654 (689)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHH
T ss_pred EECCChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876543
No 95
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.48 E-value=0.00055 Score=69.58 Aligned_cols=96 Identities=10% Similarity=0.107 Sum_probs=63.2
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCCC-------------------CccceEEcCCeeEEEecCC
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKED-------------------KQETPIDVHRIRSVKVSRG 276 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~~-------------------~p~g~I~L~~~~sV~~~~~ 276 (334)
+..+++|.|..+.++ +.|+.|||.|=++.|.|-+.+++ .....|+|..+. |+-..+
T Consensus 410 R~LI~eG~l~~~~~~----~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~-v~e~~~ 484 (536)
T 3odw_A 410 KKLVHEGPLTWRVTK----DKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAM-TREVAT 484 (536)
T ss_dssp SCEEEEEEEEEESCC-------CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEE-EEECTT
T ss_pred ceeeeecceEEEecC----CCeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccce-eecccc
Confidence 478999999555543 45899999999999864221111 012358888763 332121
Q ss_pred CCCCCceEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHHhhc
Q psy17028 277 ARNIPKAFEIFT---GDDSLILKPKNGKNAEQWVQCLSVVVAHSQ 318 (334)
Q Consensus 277 ~~~k~~~F~I~T---~~RTy~L~AdS~ee~~eWI~AI~~aIa~~~ 318 (334)
.....|.|.+ +.++|.|+|.|.+|++.|++.|+.+|....
T Consensus 485 --d~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~ 527 (536)
T 3odw_A 485 --DHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 527 (536)
T ss_dssp --CTTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSC
T ss_pred --cCCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCC
Confidence 2223444544 346899999999999999999999998754
No 96
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=97.43 E-value=0.0011 Score=63.68 Aligned_cols=104 Identities=9% Similarity=0.139 Sum_probs=67.4
Q ss_pred CCCceEEEEecccc-----CCCcccCCceeEEEEEeCCeeE--EecCCC-------------------CCccceEEcCCe
Q psy17028 215 DSHPVIEGQLKEKK-----GRWKIFKRWRTRYFTLSGAHLS--YKGSKE-------------------DKQETPIDVHRI 268 (334)
Q Consensus 215 ~g~vlkeGwLkkK~-----G~~~~~K~WKrRwFVL~~~~L~--Yk~~~~-------------------~~p~g~I~L~~~ 268 (334)
.|..+.+|.+.... |++ +.-+.|++-|=++.|. .++... -.-.+.|+|..+
T Consensus 235 ~g~ll~~~~~~~~~~~~~~~~~---~k~~~~~~fLF~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~ 311 (377)
T 1foe_A 235 MGDLLLHTSVIWLNPPASLGKW---KKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEAL 311 (377)
T ss_dssp GGGEEEEEEEEESSCCHHHHTT---CSSCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGE
T ss_pred ccceeeecceeeccCchhhccc---cccceEEEEEcCCeEEEEeccccccccccccccccccccCCCceeEeeeccccce
Confidence 35667777763222 222 3457899999888764 453210 013467888877
Q ss_pred eEEEecCCCCCCCceEEEE--------eCCeEEEEEcCCHHHHHHHHHHHHHHHHhhcccc
Q psy17028 269 RSVKVSRGARNIPKAFEIF--------TGDDSLILKPKNGKNAEQWVQCLSVVVAHSQAKE 321 (334)
Q Consensus 269 ~sV~~~~~~~~k~~~F~I~--------T~~RTy~L~AdS~ee~~eWI~AI~~aIa~~~~ke 321 (334)
...+..+++......|.|. ++.++|.|+|.|.+++++|+++|+.++...+.+.
T Consensus 312 ~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~~~~ 372 (377)
T 1foe_A 312 QVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHRRQ 372 (377)
T ss_dssp EEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHhhhh
Confidence 5433433332233468886 3567999999999999999999999997655443
No 97
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=97.33 E-value=0.0013 Score=62.97 Aligned_cols=99 Identities=10% Similarity=0.111 Sum_probs=66.0
Q ss_pred CCCceEEEEeccccCCCc--ccCCceeEEEEEeCCeeEEec-CCC-----C----CccceEEcCCeeEEEecCCCCCCCc
Q psy17028 215 DSHPVIEGQLKEKKGRWK--IFKRWRTRYFTLSGAHLSYKG-SKE-----D----KQETPIDVHRIRSVKVSRGARNIPK 282 (334)
Q Consensus 215 ~g~vlkeGwLkkK~G~~~--~~K~WKrRwFVL~~~~L~Yk~-~~~-----~----~p~g~I~L~~~~sV~~~~~~~~k~~ 282 (334)
.|..+.+|.+..+.|..+ ..+.++.|++.|=++.|.|-+ .++ . .-.+.|+|..+...+..+ +.++
T Consensus 204 ~~~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~---~~~~ 280 (354)
T 2rgn_B 204 QGKLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQ---GDPC 280 (354)
T ss_dssp SCCEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGEEEEESGG---GCTT
T ss_pred hccccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeeccC---CCCc
Confidence 456778887644433210 124679999999999987532 211 0 134678888764322222 3468
Q ss_pred eEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 283 AFEIFTG-----DDSLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 283 ~F~I~T~-----~RTy~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
.|.|... ..+|.|+|.|.+++++|+++|+.++..
T Consensus 281 ~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 281 RFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILES 319 (354)
T ss_dssp EEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 9999763 368999999999999999999999854
No 98
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=96.57 E-value=0.0065 Score=66.51 Aligned_cols=92 Identities=20% Similarity=0.327 Sum_probs=66.5
Q ss_pred CCceEEEEeccccCCCcccCCceeEEEEEeCCeeEE-ecCCC-----------CCccceEEcCCeeEEEecCCCCCCCce
Q psy17028 216 SHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSY-KGSKE-----------DKQETPIDVHRIRSVKVSRGARNIPKA 283 (334)
Q Consensus 216 g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Y-k~~~~-----------~~p~g~I~L~~~~sV~~~~~~~~k~~~ 283 (334)
+..+++|.| .+.++ + +.||+.|=++.|.| |.... -...+.|+|..+...+..++ ...+++
T Consensus 442 r~Li~eG~l-~~~~~----k--~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~-~~~~~~ 513 (1049)
T 3ksy_A 442 NEFIMEGTL-TRVGA----K--HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDT-NEYKHA 513 (1049)
T ss_dssp SCCCCEEEE-EETTC----S--SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCS-SSCCSE
T ss_pred ceEEEeceE-EEEcc----C--ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCC-ccccce
Confidence 367899999 44443 2 88999999999875 32211 12467888888753333222 245689
Q ss_pred EEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 284 FEIFTGDD-SLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 284 F~I~T~~R-Ty~L~AdS~ee~~eWI~AI~~aIa 315 (334)
|.|...++ +|.|+|.|++++++|+++|+.+..
T Consensus 514 F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 514 FEIILKDENSVIFSAKSAEEKNNWMAALISLQY 546 (1049)
T ss_dssp EEECCTTSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 99987764 999999999999999999987654
No 99
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=95.99 E-value=0.029 Score=52.32 Aligned_cols=56 Identities=16% Similarity=0.357 Sum_probs=42.9
Q ss_pred cceEEcCCeeEEEecCCCCCCCceEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 260 ETPIDVHRIRSVKVSRGARNIPKAFEIFTGD--DSLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 260 ~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~--RTy~L~AdS~ee~~eWI~AI~~aIa 315 (334)
.+.|+|.-+....-......++++|+|..++ .+.+|.|+|.+++++|+++|+.+|.
T Consensus 205 ~~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 205 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp CEEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 3678887765443222222378999999997 4799999999999999999999874
No 100
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=95.96 E-value=0.043 Score=58.42 Aligned_cols=93 Identities=18% Similarity=0.330 Sum_probs=61.2
Q ss_pred ceEEEEeccccCCCcccCCceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCCe-----
Q psy17028 218 PVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDD----- 291 (334)
Q Consensus 218 vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~R----- 291 (334)
++..|||-...... ..+.=|.-||||+...|. ||++.+...+-.++|.+...-....+.-++++.|.|+.++.
T Consensus 540 ~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (772)
T 3zvr_A 540 VIRKGWLTINNIGI-MKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYK 618 (772)
T ss_dssp EEEEEEEEESSSCC-C---CCEEEEEEESSEEEEESSTTCCCEEEEEECTTEEEEEC-------CEEEEEEETTSSCSBT
T ss_pred ceeeeeeeeccccc-ccCCCccceeeccccccccccchhhhcccccccccccccchhhhccccccccccccCCccccccc
Confidence 88999993322111 023458899999999999 88866555566778866542222222224567899987653
Q ss_pred ---EEEEEcCCHHHHHHHHHHHH
Q psy17028 292 ---SLILKPKNGKNAEQWVQCLS 311 (334)
Q Consensus 292 ---Ty~L~AdS~ee~~eWI~AI~ 311 (334)
+..|.|+|.++.+.|....=
T Consensus 619 ~~~~~~l~~~~~~~~~~~~~~~~ 641 (772)
T 3zvr_A 619 DYRQLELACETQEEVDSWKASFL 641 (772)
T ss_dssp TBSEEEEEESSHHHHHHHHHHHH
T ss_pred hhhhhhhhccccccchhhHHhhh
Confidence 57899999999999999883
No 101
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=95.65 E-value=0.033 Score=49.38 Aligned_cols=56 Identities=14% Similarity=0.330 Sum_probs=44.3
Q ss_pred cceEEcCCeeEEEecCCCCCCCceEEEEeCCe--EEEEEcCCHHHHHHHHHHHHHHHH
Q psy17028 260 ETPIDVHRIRSVKVSRGARNIPKAFEIFTGDD--SLILKPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 260 ~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~R--Ty~L~AdS~ee~~eWI~AI~~aIa 315 (334)
..+|+|.-+....-......++++|+|..++. |-+|.|+|..++++|+++|+..|.
T Consensus 120 ~~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 120 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp CEEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred ceeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 47899988765553222223678999999984 899999999999999999998874
No 102
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=93.96 E-value=0.1 Score=55.69 Aligned_cols=78 Identities=14% Similarity=0.232 Sum_probs=57.9
Q ss_pred eeEEEEEeCCee--EEecCCCCCccceEEcCCeeEEEecCCCC-------------------CCCceEEEEeCCe-----
Q psy17028 238 RTRYFTLSGAHL--SYKGSKEDKQETPIDVHRIRSVKVSRGAR-------------------NIPKAFEIFTGDD----- 291 (334)
Q Consensus 238 KrRwFVL~~~~L--~Yk~~~~~~p~g~I~L~~~~sV~~~~~~~-------------------~k~~~F~I~T~~R----- 291 (334)
++|+|.|+.+.. +|+... +..+.|+|+.+..|..+...+ ....+|.|+..++
T Consensus 34 k~~~frLd~d~~~l~W~~~~--k~~~~l~I~~IkeIR~G~~s~~pk~~~~~e~~~~~~~~~~~e~~~fTIvyg~~~~~l~ 111 (799)
T 2zkm_X 34 SPVILRVDPKGYYLYWTYQS--KEMEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNSFLLKTLTVVSGPDMVDLT 111 (799)
T ss_dssp EEEEEEECTTSCEEEEEETT--SCEEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCCGGGTEEEEEECSSSSSCE
T ss_pred eEEEEEEcCCCCEEEEccCC--CcCceEeeeeeHHhhcCCCCCCCchHHHHHHhcccCcccccccceEEEEECCCcccee
Confidence 679999987754 455432 235799999999998642111 1246899987653
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHhh
Q psy17028 292 SLILKPKNGKNAEQWVQCLSVVVAHS 317 (334)
Q Consensus 292 Ty~L~AdS~ee~~eWI~AI~~aIa~~ 317 (334)
+..|.|+|+++++.|+..|+..+...
T Consensus 112 ~L~lvA~s~~ea~~Wv~GL~~L~~~~ 137 (799)
T 2zkm_X 112 FHNFVSYKENVGKAWAEDVLALVKHP 137 (799)
T ss_dssp EEEEEESSSSHHHHHHHHHHHHHHCT
T ss_pred EEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999988653
No 103
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=93.53 E-value=0.13 Score=49.97 Aligned_cols=104 Identities=10% Similarity=0.219 Sum_probs=74.4
Q ss_pred hHHHHHhhHHHHHhhccCch--hhHHHHHHHHHHhhcCCchhhhchHHHHHhhhcCchhHHHHHHHHHhhccCC-hhhHH
Q psy17028 12 GYKLLEASLPQLCEYLATNS--TILATMQIFLHLAEKRPQLLVDYVPKLKQANEGNANTLCVTVQVVAAVGRLN-KDKAQ 88 (334)
Q Consensus 12 ~~~~l~~~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~~l~~~l~~~k~~~~~~p~~~~~~aki~gavG~~~-~~~a~ 88 (334)
.|++++..++.+-+.|+|.. .-..++.+|.+|...++.++...++.+.+.+-++|...+...++++.+++-+ ++.++
T Consensus 170 ~pe~v~~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~~d~~a~~kLv~~l~~~~l~~~~~q~~llr~l~~~~~~d~~~~~~ 249 (355)
T 3tjz_B 170 SFDVVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAVSKMISKFTRHGLKSPFAYCMMIRVASRQLEDEDGSRDS 249 (355)
T ss_dssp CHHHHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCCSCHHHHHHHHHHHTCC----------
T ss_pred CHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhhchHHHHHHHHHHhcCCCcChHHHHHHHHHHHHhccccchhhHH
Confidence 47888899999999998765 3445889999999999999999999988877778999999999999999988 46677
Q ss_pred HHHHHHHhhCCCCcchhhhHHHHHHHHhhc
Q psy17028 89 DALNFILAHLPKADRSSQSVLLREATLLCS 118 (334)
Q Consensus 89 ~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~ 118 (334)
.-+++|.+.|. |+...+++-=++.|++
T Consensus 250 ~~~~~l~~~L~---~~~~aVvyEa~k~I~~ 276 (355)
T 3tjz_B 250 PLFDFIESCLR---NKHEMVVYEAASAIVN 276 (355)
T ss_dssp -------CCCC---CSSHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHc---CCChHHHHHHHHHHHh
Confidence 78899999886 5777777777888887
No 104
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=93.09 E-value=0.22 Score=41.10 Aligned_cols=97 Identities=7% Similarity=0.068 Sum_probs=64.1
Q ss_pred cCCCCceEEEEeccccCCCcccCCceeEEEEEeCCeeEEecCCC--C----CccceEEcCCeeEEEecCCCCCCCceEEE
Q psy17028 213 LQDSHPVIEGQLKEKKGRWKIFKRWRTRYFTLSGAHLSYKGSKE--D----KQETPIDVHRIRSVKVSRGARNIPKAFEI 286 (334)
Q Consensus 213 ~~~g~vlkeGwLkkK~G~~~~~K~WKrRwFVL~~~~L~Yk~~~~--~----~p~g~I~L~~~~sV~~~~~~~~k~~~F~I 286 (334)
-.-|..++.|++..-.+. +.=+.|+.=|=+..|.+-+..+ . .-+..|.++.+..-+...+ +.+..|+|
T Consensus 5 ~~~G~Ll~q~~f~V~~~~----~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lte~~~~--~d~~kFei 78 (119)
T 1fho_A 5 GKLGRIIRHDAFQVWEGD----EPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTD--EDTIVLQP 78 (119)
T ss_dssp CCCCCSSEEEEEEECSTT----CSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTT--CCEEEEEC
T ss_pred HHcCCccccCceEEEeCC----CCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeeceeEEEecCCC--CCCcEEEE
Confidence 355788889988444432 1137788888888876433211 1 2356788887643332221 23567999
Q ss_pred EeCC--eEEEE--EcCCHH-HHHHHHHHHHHHHH
Q psy17028 287 FTGD--DSLIL--KPKNGK-NAEQWVQCLSVVVA 315 (334)
Q Consensus 287 ~T~~--RTy~L--~AdS~e-e~~eWI~AI~~aIa 315 (334)
..++ ..|.+ +|.|.+ ..+.|++.|+.+..
T Consensus 79 w~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~ 112 (119)
T 1fho_A 79 QEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQE 112 (119)
T ss_dssp CSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCH
T ss_pred ccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHH
Confidence 7776 36888 999999 99999999998543
No 105
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=92.80 E-value=0.24 Score=53.05 Aligned_cols=79 Identities=14% Similarity=0.184 Sum_probs=57.5
Q ss_pred eeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCCC--------------C------CCceEEEEeCCe-----
Q psy17028 238 RTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGAR--------------N------IPKAFEIFTGDD----- 291 (334)
Q Consensus 238 KrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~~--------------~------k~~~F~I~T~~R----- 291 (334)
+.|.|.|+.+..+ |-+....+....|+|+.+..|..+...+ + ...+|.|+...+
T Consensus 39 ~~~~f~lD~d~~~L~W~~~~k~~~~~l~I~~I~eVR~G~~t~~pk~~klr~~~~~~g~~~~~~e~r~fTIvyg~~~~nL~ 118 (816)
T 3qr0_A 39 IEILLRVDPKGYFLYWKIEGKEDTQLLDLAYVRDIRCAKYAKPPKDKKIKEAGTNFGSSNIPLQDKCVTICHGYNYIDLE 118 (816)
T ss_dssp EEEEEEECTTSCEEEECCTTCSSCEEEEGGGEEEEEEGGGSCCCCSHHHHHHHHHSSCTTSCHHHHEEEEEECSSSSSCE
T ss_pred eeEEEEEcCCCCEEEEeCCCCCcCcEEEeeeeeeeecCCcCCCCccHHHHHHHHhcCCCcccccccEEEEEECCCcccce
Confidence 6799999987765 5443222213789999999998654310 1 246899987764
Q ss_pred EEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 292 SLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 292 Ty~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
+..|.|+|.++++.|++.|+..+..
T Consensus 119 ~l~LvA~s~e~A~~W~~gL~~L~~~ 143 (816)
T 3qr0_A 119 WTHLVAENSSVAKKWSEEVFSYAYN 143 (816)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHTC
T ss_pred EEEEeeCCHHHHHHHHHHHHHHHHH
Confidence 3489999999999999999998754
No 106
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=92.24 E-value=0.3 Score=52.74 Aligned_cols=95 Identities=17% Similarity=0.177 Sum_probs=63.6
Q ss_pred ceEEEEeccccCCCcccCC-ceeEEEEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCC-------------------
Q psy17028 218 PVIEGQLKEKKGRWKIFKR-WRTRYFTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRG------------------- 276 (334)
Q Consensus 218 vlkeGwLkkK~G~~~~~K~-WKrRwFVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~------------------- 276 (334)
.+++|-...|=++. +. =|.++|.|+.+..+ |.+.+ .+....|+|+.+..|..+..
T Consensus 20 ~L~~Gt~f~K~~~~---~~~~k~~~frLD~d~~~L~W~~~-~ke~~~l~Is~IkeIR~G~~a~~pKd~klr~~~~~~~~~ 95 (885)
T 3ohm_B 20 TLRRGSKFIKWDEE---TSSRNLVTLRVDPNGFFLYWTGP-NMEVDTLDISSIRDTRTGRYARLPKDPKIREVLGFGGPD 95 (885)
T ss_dssp HHHHCEEEEEECTT---CCSCCEEEEEECTTSCEEEEECG-GGCEEEEEGGGEEEEEETTTSCCCCSHHHHHCC------
T ss_pred HHhCCCeEEEECCC---CCCcEEEEEEECCCCCEEEEeCC-CCCCceEeeehhhhhhcCcCCCCCccHHHHHHhccCccc
Confidence 44555543443332 11 26688899987654 43322 13335799999999886542
Q ss_pred CCCCCceEEEEeCCe-----EEEEEcCCHHHHHHHHHHHHHHHHh
Q psy17028 277 ARNIPKAFEIFTGDD-----SLILKPKNGKNAEQWVQCLSVVVAH 316 (334)
Q Consensus 277 ~~~k~~~F~I~T~~R-----Ty~L~AdS~ee~~eWI~AI~~aIa~ 316 (334)
......+|.|+...+ +..|.|.|.++++.|+..|+..+..
T Consensus 96 ~~~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~ 140 (885)
T 3ohm_B 96 ARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMN 140 (885)
T ss_dssp ---CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred CcccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhh
Confidence 112357899987753 5899999999999999999987764
No 107
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=91.11 E-value=3.9 Score=33.95 Aligned_cols=79 Identities=15% Similarity=0.312 Sum_probs=57.4
Q ss_pred CceeEEEEEeCCeeEEec-CC-----CCCccceEEcCCeeEEEecCCCCCCCceEEEEeCC------eEEEEEcCCHHHH
Q psy17028 236 RWRTRYFTLSGAHLSYKG-SK-----EDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD------DSLILKPKNGKNA 303 (334)
Q Consensus 236 ~WKrRwFVL~~~~L~Yk~-~~-----~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~------RTy~L~AdS~ee~ 303 (334)
+=..|=++++|+.+.--. +. +..-..++.++++..+++.. ..|.-|.|+-.. +.|.|.|.|.+|+
T Consensus 26 ~~~ER~L~IDGdYIHImP~~~~~~~~~~~KTtS~H~s~Vv~~K~s~---k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea 102 (121)
T 3ulb_A 26 NKHERTLAIDGDYIYIVPPEGRIHWHDNVKTKSLHISQVVLVKKSK---RVPEHFKIFVRREGQDDIKRYYFEAVSGQEC 102 (121)
T ss_dssp EEEEEEEEEETTEEEEECCC-------CCCCEEEEGGGEEEEEECS---SCTTEEEEEECCTTCSSCEEEEEEESSHHHH
T ss_pred ccccEEEEEcCceEEEecCCCCcccccCCcEEEEEEeeEEEEEecc---cCCCcEEEEEEccCCCCcceeEEEeCCHHHH
Confidence 346777888888774211 11 12344688999988888753 457789886533 6899999999999
Q ss_pred HHHHHHHHHHHHhh
Q psy17028 304 EQWVQCLSVVVAHS 317 (334)
Q Consensus 304 ~eWI~AI~~aIa~~ 317 (334)
.+=|..|+..++..
T Consensus 103 ~EIV~~ik~~~~~Y 116 (121)
T 3ulb_A 103 TEIVTRLQNLLSAY 116 (121)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988753
No 108
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=90.24 E-value=1.4 Score=39.58 Aligned_cols=76 Identities=24% Similarity=0.384 Sum_probs=54.3
Q ss_pred EEEEEeCCe--eEEecCCC--------CCccceEEcCCeeEEEecCCC---------C-C---CCceEEEEeCC-eEEEE
Q psy17028 240 RYFTLSGAH--LSYKGSKE--------DKQETPIDVHRIRSVKVSRGA---------R-N---IPKAFEIFTGD-DSLIL 295 (334)
Q Consensus 240 RwFVL~~~~--L~Yk~~~~--------~~p~g~I~L~~~~sV~~~~~~---------~-~---k~~~F~I~T~~-RTy~L 295 (334)
||+.|+.|. |.|.+..+ +.....|+|+.+.+|...... + . ....|.|...+ .++.|
T Consensus 51 ~f~rLs~n~k~L~y~d~~~~~~~~p~ld~l~~kI~ls~Is~V~sg~~~p~~~~~~~~k~~~~~~~laFSii~~~~~~L~f 130 (203)
T 3a98_B 51 WYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNF 130 (203)
T ss_dssp EEEEECTTSSEEEEEECCBCSSCBCCBCCSCCEEEGGGEEEEEEGGGSTTC--------CCTTGGGEEEEEETTTEEEEE
T ss_pred EEEEECCCCceEEEccccccccCCCChhhcccceeHhhhhHhhcCCCCccccccccccccCcccceEEEEecCCCceEEE
Confidence 488999875 45766332 122468999999988752211 0 0 12589987654 58999
Q ss_pred EcCCHHHHHHHHHHHHHHHH
Q psy17028 296 KPKNGKNAEQWVQCLSVVVA 315 (334)
Q Consensus 296 ~AdS~ee~~eWI~AI~~aIa 315 (334)
.|.|+++...|+..|+-.+.
T Consensus 131 vA~s~~~~~~W~DGL~~Llg 150 (203)
T 3a98_B 131 IAPDKHEYCIWTDGLNALLG 150 (203)
T ss_dssp ECSSHHHHHHHHHHHHHHTT
T ss_pred ecCCHHHHHHHHHHHHHHhc
Confidence 99999999999999998764
No 109
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=89.61 E-value=1.1 Score=45.92 Aligned_cols=111 Identities=19% Similarity=0.223 Sum_probs=89.9
Q ss_pred hHHHHHhhHHHHHhhcc--CchhhHHHHHHHHHHhhcCC--chhhhchHHHHHh-h-hcCchhHHHHHHHHHhhccCChh
Q psy17028 12 GYKLLEASLPQLCEYLA--TNSTILATMQIFLHLAEKRP--QLLVDYVPKLKQA-N-EGNANTLCVTVQVVAAVGRLNKD 85 (334)
Q Consensus 12 ~~~~l~~~vp~L~~~L~--~~~~~~~~l~il~~ia~~~p--~~l~~~l~~~k~~-~-~~~p~~~~~~aki~gavG~~~~~ 85 (334)
.+++++.++..|..+|. |+.....+|..|..++..+| ..+..|.+.+-.. . +..+++--.+-.++..++ +++
T Consensus 323 ~~~~~~~~~~~L~~~L~~~~~niry~aL~~l~~l~~~~~~~~~~~~~~~~i~~~L~~d~d~~Ir~~aL~lL~~l~--~~~ 400 (621)
T 2vgl_A 323 EPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMC--DRS 400 (621)
T ss_dssp CHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHTTCTTTHHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHC--CHH
T ss_pred cHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHhccCCCHhHHHHHHHHHHHHc--Chh
Confidence 45788999999999995 67777899999999999988 6778887776443 3 566666666666766664 787
Q ss_pred hHHHHHHHHHhhCCCCcchhhhHHHHHHHHhhccCCCcc
Q psy17028 86 KAQDALNFILAHLPKADRSSQSVLLREATLLCSTYPVLC 124 (334)
Q Consensus 86 ~a~~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~p~ll 124 (334)
-.++=+.-|.+++...|..+-..+++-|..++.+||.-.
T Consensus 401 Nv~~Iv~eL~~yl~~~d~~~~~~~v~~I~~la~k~~~~~ 439 (621)
T 2vgl_A 401 NAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDY 439 (621)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCSST
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcH
Confidence 888888888888888999999999999999999998644
No 110
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=89.10 E-value=0.45 Score=48.41 Aligned_cols=106 Identities=14% Similarity=0.247 Sum_probs=69.6
Q ss_pred hHHHHHhhHHHHHhhccCch--hhHHHHHHHHHHhhcCCc---hhhhchHHHHHhh----------------hcCchhHH
Q psy17028 12 GYKLLEASLPQLCEYLATNS--TILATMQIFLHLAEKRPQ---LLVDYVPKLKQAN----------------EGNANTLC 70 (334)
Q Consensus 12 ~~~~l~~~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~---~l~~~l~~~k~~~----------------~~~p~~~~ 70 (334)
.|++++..+|.|...|+|+. -...++..|.+|+...|. .+.+++|.+-+.- -.+|.+..
T Consensus 173 ~p~~v~~~~~~l~~lL~D~d~~V~~~Al~~L~~i~~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~~~~~~~~~~~~~q~ 252 (618)
T 1w63_A 173 VPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQV 252 (618)
T ss_dssp CGGGGGGGGGGTTTSTTCCCHHHHHHHHHHHHHHCCSHHHHHHHHHTTHHHHHHHHHHHHHSCCCTTTCSSSSSCHHHHH
T ss_pred ChHHHHHHHHHHHHHhCCCCHhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHcCCCCccccccCCCCChHHH
Confidence 35677788888888888764 455688889999888775 4445555443321 24788888
Q ss_pred HHHHHHHhhccCChhhHHHHHHHHHhhCCCCcc--hhhhHHHHH-HHHhh
Q psy17028 71 VTVQVVAAVGRLNKDKAQDALNFILAHLPKADR--SSQSVLLRE-ATLLC 117 (334)
Q Consensus 71 ~~aki~gavG~~~~~~a~~~L~~l~~~L~~~d~--~~~~~Ll~E-i~~l~ 117 (334)
.+.++++.++..+.+-.+..+++|..-+.+.++ +....++.| |+.+.
T Consensus 253 ~il~~L~~l~~~~~~~~~~~~~~L~~l~~~~~~~~~~~~aV~~ea~~~i~ 302 (618)
T 1w63_A 253 RILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIM 302 (618)
T ss_dssp HHHHHHHHHTTTCHHHHHTTHHHHHHHHHTSCCSSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHH
Confidence 899999999988877666666676665544332 222344445 44443
No 111
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=84.52 E-value=2.6 Score=42.36 Aligned_cols=103 Identities=10% Similarity=0.087 Sum_probs=53.3
Q ss_pred HhhHHHHHhhc-cCchhhHHHHHHHHHHhhcCCchhhhchHHHHHhhhcCchhHHHHHHHHHhhccCChhhHHHHHHHHH
Q psy17028 17 EASLPQLCEYL-ATNSTILATMQIFLHLAEKRPQLLVDYVPKLKQANEGNANTLCVTVQVVAAVGRLNKDKAQDALNFIL 95 (334)
Q Consensus 17 ~~~vp~L~~~L-~~~~~~~~~l~il~~ia~~~p~~l~~~l~~~k~~~~~~p~~~~~~aki~gavG~~~~~~a~~~L~~l~ 95 (334)
...+|.|+..+ .|+.....+|..|..++..+|..+..++..+--.-...+++=-.+..+++.++ +++-.+.-+.-|.
T Consensus 282 ~~~~~~L~~L~~~d~~vr~~aL~~l~~i~~~~p~~~~~~~~~~~~~~~d~~~Ir~~al~~L~~l~--~~~nv~~iv~~L~ 359 (591)
T 2vgl_B 282 KKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLA--SQANIAQVLAELK 359 (591)
T ss_dssp HHTHHHHHHHTTSCHHHHHHHHHHHHHHHHHCCSTTTTCTTTTSCCTTSCHHHHHHHHHHHHHTC--CSSTHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHHHHhChHHHHHHHHhheeccCChHHHHHHHHHHHHHHC--ChhhHHHHHHHHH
Confidence 34555555333 37777789999999999999999877653221000111222223333433333 2333334444444
Q ss_pred hhCCCCcchhhhHHHHHHHHhhccCC
Q psy17028 96 AHLPKADRSSQSVLLREATLLCSTYP 121 (334)
Q Consensus 96 ~~L~~~d~~~~~~Ll~Ei~~l~~~~p 121 (334)
+.+...|..+......-|..++..||
T Consensus 360 ~~l~~~d~~~r~~~v~aI~~la~~~~ 385 (591)
T 2vgl_B 360 EYATEVDVDFVRKAVRAIGRCAIKVE 385 (591)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHhCh
Confidence 44444444444444444444444444
No 112
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=82.34 E-value=3.5 Score=41.78 Aligned_cols=109 Identities=8% Similarity=0.049 Sum_probs=80.1
Q ss_pred HHHHHhhHHHHHhhcc--CchhhHHHHHHHHHHhhcCCchhhhchHHHHHhhh-cCchhHHHHHHHHHhhccCChhhHHH
Q psy17028 13 YKLLEASLPQLCEYLA--TNSTILATMQIFLHLAEKRPQLLVDYVPKLKQANE-GNANTLCVTVQVVAAVGRLNKDKAQD 89 (334)
Q Consensus 13 ~~~l~~~vp~L~~~L~--~~~~~~~~l~il~~ia~~~p~~l~~~l~~~k~~~~-~~p~~~~~~aki~gavG~~~~~~a~~ 89 (334)
+++.+.+++.|+.+|. |+....++|..|..++..+|..+.+|++.+-..-. ..+++=-.+..++..++. ++-.++
T Consensus 308 ~~l~~~a~~~L~~~L~~~d~~vr~~aL~~L~~i~~~~p~~~~~~~~~i~~~l~d~d~~Ir~~alelL~~l~~--~~nv~~ 385 (618)
T 1w63_A 308 SGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVN--GNNIRG 385 (618)
T ss_dssp HHHHHHHHHHHHHHHTCSSTTTHHHHHHHHHHHHHHHHHHHGGGHHHHHHGGGSSCHHHHHHHHHHHHHHCC--SSSTHH
T ss_pred HHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCChhHHHHHHHHHHHHcc--cccHHH
Confidence 4455668888888886 78888999999999999999999999877665544 345555556666666653 333455
Q ss_pred HHHHHHhhCCCCcchhhhHHHHHHHHhhccCCCc
Q psy17028 90 ALNFILAHLPKADRSSQSVLLREATLLCSTYPVL 123 (334)
Q Consensus 90 ~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~p~l 123 (334)
-+.-|.+++...|..+-..+..-|-.+|..|+.-
T Consensus 386 iv~eL~~~l~~~d~e~r~~~v~~I~~la~k~~~~ 419 (618)
T 1w63_A 386 MMKELLYFLDSCEPEFKADCASGIFLAAEKYAPS 419 (618)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCcc
Confidence 5666666666677888888888888888888753
No 113
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=81.47 E-value=7.4 Score=39.00 Aligned_cols=109 Identities=14% Similarity=0.179 Sum_probs=83.4
Q ss_pred HHHHhhHHHHHhhccCch--hhHHHHHHHHHHhhcCCchhhhchHHHHHhhh--cCchhHHHHHHHHHhhccCChhhHHH
Q psy17028 14 KLLEASLPQLCEYLATNS--TILATMQIFLHLAEKRPQLLVDYVPKLKQANE--GNANTLCVTVQVVAAVGRLNKDKAQD 89 (334)
Q Consensus 14 ~~l~~~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~~l~~~l~~~k~~~~--~~p~~~~~~aki~gavG~~~~~~a~~ 89 (334)
..-+.||+.|++.|.++. ....++.++.+|....|.....-++.|.+.-+ ..|.....++-|+|-.|...++ +.+
T Consensus 386 ~~~~~~v~~Ll~ll~~~~~~v~~e~i~~l~~ii~~~p~~~~~~v~~L~~~l~~~~~~~~~~~~~wilGey~~~~~~-~~~ 464 (591)
T 2vgl_B 386 QSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDN-ADE 464 (591)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHSCSSCCTTHHHHHHTTTTCCSHHHHHHHHHHHHTTCTTCTT-HHH
T ss_pred hHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHHHhccCHHHHHHHHHHHHcccccccC-HHH
Confidence 456789999999999764 33446778889999999876666777766654 4678888888888888877654 678
Q ss_pred HHHHHHhhCCCCcchhhhHHHHHHHHhhccCCCc
Q psy17028 90 ALNFILAHLPKADRSSQSVLLREATLLCSTYPVL 123 (334)
Q Consensus 90 ~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~p~l 123 (334)
.|..+++.+..-.-.-+..+|.=+..|...+|..
T Consensus 465 ~l~~l~~~~~~~~~~vr~~~l~a~~Kl~~~~p~~ 498 (591)
T 2vgl_B 465 LLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSE 498 (591)
T ss_dssp HHHHHSTTCSSSCHHHHHHHHHHHHHHHTTCCST
T ss_pred HHHHHHHhhccCCHHHHHHHHHHHHHHHhcCchH
Confidence 8888888777655566778888888888888864
No 114
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=80.98 E-value=9.7 Score=33.32 Aligned_cols=78 Identities=12% Similarity=0.180 Sum_probs=55.4
Q ss_pred ceeEEEEEeCC-----ee-EEecC--CCC--CccceEEcCCeeEEEecCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHH
Q psy17028 237 WRTRYFTLSGA-----HL-SYKGS--KED--KQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDSLILKPKNGKNAEQW 306 (334)
Q Consensus 237 WKrRwFVL~~~-----~L-~Yk~~--~~~--~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RTy~L~AdS~ee~~eW 306 (334)
=|.||.+|.-. .. .||.. .+. +...+=+|.+.+.|+.... .+..|.|.. +++|+.+|++.+|++.+
T Consensus 64 KK~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~~---~~~gF~ltl-~K~Y~W~a~s~~Er~~F 139 (171)
T 3hie_A 64 KKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLE---ISEGFILTM-SKKYYWETNSAKERTVF 139 (171)
T ss_dssp EEEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECSS---CTTEEEEES-SSEEEEECSSHHHHHHH
T ss_pred ccceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccCC---CCCcEEEEe-CCeEEEecCCHHHHHHH
Confidence 38999888422 23 36542 222 2456778888888876332 256899866 79999999999999999
Q ss_pred HHHHHHHHHhhc
Q psy17028 307 VQCLSVVVAHSQ 318 (334)
Q Consensus 307 I~AI~~aIa~~~ 318 (334)
|.+|-+...+..
T Consensus 140 I~sL~K~y~ky~ 151 (171)
T 3hie_A 140 IKSLITLYIQTF 151 (171)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHHHc
Confidence 999988766543
No 115
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=77.16 E-value=13 Score=30.77 Aligned_cols=103 Identities=16% Similarity=0.207 Sum_probs=71.6
Q ss_pred hhHHHHHhhccCc--hhhHHHHHHHHHHhhcCCch---hh--hchHHHHHh-hhcCchhHHHHHHHHHhhccCChhhHH-
Q psy17028 18 ASLPQLCEYLATN--STILATMQIFLHLAEKRPQL---LV--DYVPKLKQA-NEGNANTLCVTVQVVAAVGRLNKDKAQ- 88 (334)
Q Consensus 18 ~~vp~L~~~L~~~--~~~~~~l~il~~ia~~~p~~---l~--~~l~~~k~~-~~~~p~~~~~~aki~gavG~~~~~~a~- 88 (334)
..||.|+..|.++ .....++.+|.+++...+.. +. +.+|.+-.. ....|.+...++.+++.+..-+++..+
T Consensus 54 g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 133 (210)
T 4db6_A 54 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 133 (210)
T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3789999999865 45567899999999776653 11 234444333 345688888999999999887776543
Q ss_pred ----HHHHHHHhhCCCCcchhhhHHHHHHHHhhccC
Q psy17028 89 ----DALNFILAHLPKADRSSQSVLLREATLLCSTY 120 (334)
Q Consensus 89 ----~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~ 120 (334)
.++.-|++.|.+.+...+..-+.=+.+|+...
T Consensus 134 ~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~ 169 (210)
T 4db6_A 134 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGG 169 (210)
T ss_dssp HHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSC
T ss_pred HHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC
Confidence 35788899988766555555555566666543
No 116
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=75.88 E-value=17 Score=30.52 Aligned_cols=101 Identities=11% Similarity=0.131 Sum_probs=72.0
Q ss_pred hHHHHHhhccC--chhhHHHHHHHHHHhhcCCchhh-----hchHHHHHh-hhcCchhHHHHHHHHHhhccCChhhHH--
Q psy17028 19 SLPQLCEYLAT--NSTILATMQIFLHLAEKRPQLLV-----DYVPKLKQA-NEGNANTLCVTVQVVAAVGRLNKDKAQ-- 88 (334)
Q Consensus 19 ~vp~L~~~L~~--~~~~~~~l~il~~ia~~~p~~l~-----~~l~~~k~~-~~~~p~~~~~~aki~gavG~~~~~~a~-- 88 (334)
.||.|+..|.+ +.....++.+|.+++...|..-. +.+|.+-+. .+..|.+...++.+++.+..-+++..+
T Consensus 87 ~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 166 (252)
T 4hxt_A 87 GVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 166 (252)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 68999999985 44566789999999987765322 234544433 345688889999999999887776543
Q ss_pred ---HHHHHHHhhCCCCcchhhhHHHHHHHHhhcc
Q psy17028 89 ---DALNFILAHLPKADRSSQSVLLREATLLCST 119 (334)
Q Consensus 89 ---~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~ 119 (334)
.++..|++.|.+.+-..+..-+.=+.+|+..
T Consensus 167 ~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~ 200 (252)
T 4hxt_A 167 VDAGGVEVLVKLLTSTDSEVQKEAARALANIASG 200 (252)
T ss_dssp HHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS
T ss_pred HHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcC
Confidence 3688899999876655555556666666653
No 117
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=72.81 E-value=6.3 Score=40.21 Aligned_cols=77 Identities=10% Similarity=0.092 Sum_probs=54.4
Q ss_pred HHHHH--hhHHHHHhhccCch--hhHHHHHHHHHHhhcCCchhhhchHHH----HHhh---hc-----------CchhHH
Q psy17028 13 YKLLE--ASLPQLCEYLATNS--TILATMQIFLHLAEKRPQLLVDYVPKL----KQAN---EG-----------NANTLC 70 (334)
Q Consensus 13 ~~~l~--~~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~~l~~~l~~~----k~~~---~~-----------~p~~~~ 70 (334)
|++++ ..++.|...|.|++ --..++.+|.+|+..+|..+..++|.+ ++.. +. +|++-.
T Consensus 180 p~~~~~~~~~~~l~~lL~d~d~~V~~~a~~~l~~i~~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~w~qi 259 (621)
T 2vgl_A 180 PDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSV 259 (621)
T ss_dssp GGGCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHHTTHHHHHHHHHHHHHHCCSSSCSTTEETTEESHHHHH
T ss_pred hhhcCchhHHHHHHHHhCCCCccHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhCCCCCccchhhcCCCCchHHH
Confidence 34555 67888888888654 456689999999999999877766643 3331 12 689988
Q ss_pred HHHHHHHhhccCChhhHHH
Q psy17028 71 VTVQVVAAVGRLNKDKAQD 89 (334)
Q Consensus 71 ~~aki~gavG~~~~~~a~~ 89 (334)
.+-++++..++.+..+.++
T Consensus 260 ~il~ll~~~~~~~d~~~~~ 278 (621)
T 2vgl_A 260 KLLRLLQCYPPPEDPAVRG 278 (621)
T ss_dssp HHHHHGGGSSSCSSHHHHH
T ss_pred HHHHHHHHhCCCCCHHHHH
Confidence 8889999888875433333
No 118
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=72.31 E-value=11 Score=35.94 Aligned_cols=79 Identities=11% Similarity=0.198 Sum_probs=54.6
Q ss_pred CceeEEEEEeCCe-----eE-EecC--CCC--CccceEEcCCeeEEEecCCCCCCCceEEEEeCCeEEEEEcCCHHHHHH
Q psy17028 236 RWRTRYFTLSGAH-----LS-YKGS--KED--KQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDSLILKPKNGKNAEQ 305 (334)
Q Consensus 236 ~WKrRwFVL~~~~-----L~-Yk~~--~~~--~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RTy~L~AdS~ee~~e 305 (334)
+=|.||.+|.-.. +. ||.. .+. +...+-+|++.+.|+..- ..+..|.|.. +++|+.+|++.+|++-
T Consensus 133 kKK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKTW~L~ELk~Id~~~---~~~~gF~LTl-~K~YyW~A~s~kER~~ 208 (320)
T 3a58_A 133 NKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDL---EISEGFILTM-SKKYYWETNSAKERTV 208 (320)
T ss_dssp GEEEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEEEEGGGCCEEEECS---SCTTEEEEES-SSEEEEEESSHHHHHH
T ss_pred ccCceEEEEEEecCCCceEEEEEEEecCCCceEecceechhhhhhhhccc---CCCCceEEEe-CCceEEecCCHHHHHH
Confidence 3488998885332 43 6542 111 245677888888886311 1235798866 9999999999999999
Q ss_pred HHHHHHHHHHhhc
Q psy17028 306 WVQCLSVVVAHSQ 318 (334)
Q Consensus 306 WI~AI~~aIa~~~ 318 (334)
+|..|-+......
T Consensus 209 FI~sLvKiy~KYt 221 (320)
T 3a58_A 209 FIKSLITLYIQTF 221 (320)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 9999987765443
No 119
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=70.40 E-value=27 Score=29.64 Aligned_cols=84 Identities=15% Similarity=0.216 Sum_probs=59.0
Q ss_pred hHHHHHhhccCch--hhHHHHHHHHHHhhcCCchh-----hhchHHHHHhh-hcCchhHHHHHHHHHhhccCChhhHHH-
Q psy17028 19 SLPQLCEYLATNS--TILATMQIFLHLAEKRPQLL-----VDYVPKLKQAN-EGNANTLCVTVQVVAAVGRLNKDKAQD- 89 (334)
Q Consensus 19 ~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~~l-----~~~l~~~k~~~-~~~p~~~~~~aki~gavG~~~~~~a~~- 89 (334)
.||.|+..|.+++ ....++.+|.+++...|... .+.+|.|-+.- ...|.+...++.+++.+..-+++..+.
T Consensus 139 ~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 218 (252)
T 4db8_A 139 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAV 218 (252)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred CHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 7899999998654 46679999999998775532 34466655443 346788888999999888767664433
Q ss_pred ----HHHHHHhhCCCCc
Q psy17028 90 ----ALNFILAHLPKAD 102 (334)
Q Consensus 90 ----~L~~l~~~L~~~d 102 (334)
++..|++.|...+
T Consensus 219 ~~~g~i~~L~~ll~~~~ 235 (252)
T 4db8_A 219 KEAGALEKLEQLQSHEN 235 (252)
T ss_dssp HHTTHHHHHHTTTTCSS
T ss_pred HHCCcHHHHHHHhCCCC
Confidence 4666777666543
No 120
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=69.62 E-value=33 Score=31.61 Aligned_cols=114 Identities=13% Similarity=0.121 Sum_probs=69.0
Q ss_pred HHhhHHHHHhhccCc----hhhHHHHHHHHHHhhcC-CchhhhchHHH----HHhhhc---CchhHHHHHHHHHhhccCC
Q psy17028 16 LEASLPQLCEYLATN----STILATMQIFLHLAEKR-PQLLVDYVPKL----KQANEG---NANTLCVTVQVVAAVGRLN 83 (334)
Q Consensus 16 l~~~vp~L~~~L~~~----~~~~~~l~il~~ia~~~-p~~l~~~l~~~----k~~~~~---~p~~~~~~aki~gavG~~~ 83 (334)
....+|.|+..+.++ .....++.+|..++... |..+..+++.+ ...-.. +|.+-..+++.++.+-..-
T Consensus 126 w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~ 205 (462)
T 1ibr_B 126 WPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFT 205 (462)
T ss_dssp CTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTT
T ss_pred cHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 346789999999765 56678999999999854 65555554443 333322 4555566777777643322
Q ss_pred hhh-----HHH-HHHHHHhhCCCCcchhhhHHHHHHHHhhccCCCccccccc
Q psy17028 84 KDK-----AQD-ALNFILAHLPKADRSSQSVLLREATLLCSTYPVLCTDKML 129 (334)
Q Consensus 84 ~~~-----a~~-~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~p~ll~~~~~ 129 (334)
++. -+. .+..|.+.+...+-......+.=+..|++.||..|.+.+.
T Consensus 206 ~~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~ 257 (462)
T 1ibr_B 206 KANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMG 257 (462)
T ss_dssp HHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTT
T ss_pred HHhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211 112 2344444444444444445566667788888888877666
No 121
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=67.35 E-value=23 Score=30.11 Aligned_cols=103 Identities=16% Similarity=0.197 Sum_probs=69.5
Q ss_pred hhHHHHHhhccCch--hhHHHHHHHHHHhhcCCchhh-----hchHHHHHh-hhcCchhHHHHHHHHHhhccCChhhHH-
Q psy17028 18 ASLPQLCEYLATNS--TILATMQIFLHLAEKRPQLLV-----DYVPKLKQA-NEGNANTLCVTVQVVAAVGRLNKDKAQ- 88 (334)
Q Consensus 18 ~~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~~l~-----~~l~~~k~~-~~~~p~~~~~~aki~gavG~~~~~~a~- 88 (334)
..||.|+..|.++. ....++.+|.+++...|..-. +.+|.+-+. ...+|.+...++.+++.+..-++.+.+
T Consensus 54 g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 133 (252)
T 4db8_A 54 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 133 (252)
T ss_dssp THHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHH
Confidence 37899999998654 455688899999986654321 134444433 335788889999999999888776622
Q ss_pred ----HHHHHHHhhCCCCcchhhhHHHHHHHHhhccC
Q psy17028 89 ----DALNFILAHLPKADRSSQSVLLREATLLCSTY 120 (334)
Q Consensus 89 ----~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~ 120 (334)
.++..|++.|...+...+..-+.=+.+|+...
T Consensus 134 ~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~ 169 (252)
T 4db8_A 134 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGG 169 (252)
T ss_dssp HHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCC
Confidence 36888999987765444444444455666543
No 122
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=64.89 E-value=34 Score=28.14 Aligned_cols=105 Identities=15% Similarity=0.202 Sum_probs=66.6
Q ss_pred HHHhhHHHHHhhccC--chhhHHHHHHHHHHhhcCCchhh-----hchHHHHHh-hhcCchhHHHHHHHHHhhccCChhh
Q psy17028 15 LLEASLPQLCEYLAT--NSTILATMQIFLHLAEKRPQLLV-----DYVPKLKQA-NEGNANTLCVTVQVVAAVGRLNKDK 86 (334)
Q Consensus 15 ~l~~~vp~L~~~L~~--~~~~~~~l~il~~ia~~~p~~l~-----~~l~~~k~~-~~~~p~~~~~~aki~gavG~~~~~~ 86 (334)
--....|.|+..|.+ +.....++.+|.+++...+..-. +.+|.+-+. ...+|.+...++.+++.+..-+++.
T Consensus 9 ~~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~ 88 (210)
T 4db6_A 9 HHGSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQ 88 (210)
T ss_dssp ----CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred cccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHH
Confidence 334567888888874 45556789999999977665422 234544433 3457888888999999887666553
Q ss_pred HHH-----HHHHHHhhCCCCcchhhhHHHHHHHHhhcc
Q psy17028 87 AQD-----ALNFILAHLPKADRSSQSVLLREATLLCST 119 (334)
Q Consensus 87 a~~-----~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~ 119 (334)
.+. ++..|++.|.+.+-..+..-+.=+.+|+..
T Consensus 89 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~ 126 (210)
T 4db6_A 89 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG 126 (210)
T ss_dssp HHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcC
Confidence 322 578899999887644444444444555543
No 123
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=63.86 E-value=22 Score=33.79 Aligned_cols=113 Identities=12% Similarity=0.124 Sum_probs=69.5
Q ss_pred CCcchHHHHHhhHHHHHhhcc--CchhhHHHHHHHHHHhhcCCch--hh---hchHHHHHhhh--cCchhHHHHHHHHHh
Q psy17028 8 NLCGGYKLLEASLPQLCEYLA--TNSTILATMQIFLHLAEKRPQL--LV---DYVPKLKQANE--GNANTLCVTVQVVAA 78 (334)
Q Consensus 8 ~~~~~~~~l~~~vp~L~~~L~--~~~~~~~~l~il~~ia~~~p~~--l~---~~l~~~k~~~~--~~p~~~~~~aki~ga 78 (334)
++-||+++-..+||.|+..|. |+.....+..+|.++|...+.. +. +.+|.+-+.-. ..|...-.+++.++.
T Consensus 7 ~~~~~~~~~~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ 86 (529)
T 1jdh_A 7 NYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHN 86 (529)
T ss_dssp ----------CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred hcCchhhhhHhhHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 345788888889999999997 4566777999999999765532 11 45565555433 367788888888888
Q ss_pred hccCChhhH----HHHHHHHHhhCCCCcchhhhHHHHHHHHhhccC
Q psy17028 79 VGRLNKDKA----QDALNFILAHLPKADRSSQSVLLREATLLCSTY 120 (334)
Q Consensus 79 vG~~~~~~a----~~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~ 120 (334)
+...++-+. ..++..|++.|.+-+...+..-+.=+.+|+...
T Consensus 87 ls~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~ 132 (529)
T 1jdh_A 87 LSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQ 132 (529)
T ss_dssp HTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHC
T ss_pred HHcCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCC
Confidence 766543211 135778889998876555555555566666543
No 124
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=61.77 E-value=48 Score=27.63 Aligned_cols=104 Identities=11% Similarity=0.064 Sum_probs=71.5
Q ss_pred hHHHHHhhccCc--hhhHHHHHHHHHHhhcCCchh-----hhchHHHHHhh-hcCchhHHHHHHHHHhhccCChhhHH--
Q psy17028 19 SLPQLCEYLATN--STILATMQIFLHLAEKRPQLL-----VDYVPKLKQAN-EGNANTLCVTVQVVAAVGRLNKDKAQ-- 88 (334)
Q Consensus 19 ~vp~L~~~L~~~--~~~~~~l~il~~ia~~~p~~l-----~~~l~~~k~~~-~~~p~~~~~~aki~gavG~~~~~~a~-- 88 (334)
.||.|+..|.++ .....++.+|.+++...|... .+.+|.+-..- ...|.+...++.+++.+..-+++..+
T Consensus 129 ~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l 208 (252)
T 4hxt_A 129 GVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAI 208 (252)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHH
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 689999999865 466679999999998776542 12345444433 45678888889999988876666443
Q ss_pred ---HHHHHHHhhCCCCcchhhhHHHHHHHHhhccCCC
Q psy17028 89 ---DALNFILAHLPKADRSSQSVLLREATLLCSTYPV 122 (334)
Q Consensus 89 ---~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~p~ 122 (334)
.++..|++.|...+...+..-+.=+.+|+...+.
T Consensus 209 ~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~ 245 (252)
T 4hxt_A 209 VDAGGVEVLQKLLTSTDSEVQKEAQRALENIKSGGWL 245 (252)
T ss_dssp HHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHTCBC
T ss_pred HHCCCHHHHHHHHCCCcHHHHHHHHHHHHHHHcCCCc
Confidence 2477888888776655555555556666665554
No 125
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=58.31 E-value=44 Score=29.03 Aligned_cols=83 Identities=8% Similarity=-0.040 Sum_probs=48.4
Q ss_pred hHHHHHhhccCch--hhHHHHHHHHHHhhcCCchhhhchHHHH--HhhhcCchhHHHHHHHHHhhccCChhhHHHHHHHH
Q psy17028 19 SLPQLCEYLATNS--TILATMQIFLHLAEKRPQLLVDYVPKLK--QANEGNANTLCVTVQVVAAVGRLNKDKAQDALNFI 94 (334)
Q Consensus 19 ~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~~l~~~l~~~k--~~~~~~p~~~~~~aki~gavG~~~~~~a~~~L~~l 94 (334)
.+|.|+..|.|+. ....+...|..+.. .+..+...++.+. ...+.+|.+-..++..+|.+|..+......++..|
T Consensus 55 ~~~~L~~~l~d~~~~vR~~A~~aL~~l~~-~~~~~~~l~~~L~~~~~~d~~~~vr~~a~~aL~~l~~~~~~~~~~~~~~L 133 (280)
T 1oyz_A 55 AVRLAIEFCSDKNYIRRDIGAFILGQIKI-CKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQS 133 (280)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHSCC-CTTTHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcc-ccccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhccCCcccHHHHHHH
Confidence 5667777776553 33445555555542 2223334444443 23556777777788888887765554455667777
Q ss_pred HhhCCCCc
Q psy17028 95 LAHLPKAD 102 (334)
Q Consensus 95 ~~~L~~~d 102 (334)
+..|...+
T Consensus 134 ~~~l~d~~ 141 (280)
T 1oyz_A 134 QITAFDKS 141 (280)
T ss_dssp HHHTTCSC
T ss_pred HHHhhCCC
Confidence 77666543
No 126
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=56.63 E-value=6.2 Score=40.87 Aligned_cols=110 Identities=8% Similarity=0.040 Sum_probs=71.3
Q ss_pred HhhHHHHHhhccC--chhhHHHHHHHHHHhhcCCchhhhchHHH-----HHhhhcCchhHHHHHHHHHhhccCC----hh
Q psy17028 17 EASLPQLCEYLAT--NSTILATMQIFLHLAEKRPQLLVDYVPKL-----KQANEGNANTLCVTVQVVAAVGRLN----KD 85 (334)
Q Consensus 17 ~~~vp~L~~~L~~--~~~~~~~l~il~~ia~~~p~~l~~~l~~~-----k~~~~~~p~~~~~~aki~gavG~~~----~~ 85 (334)
..++|.++.+|.| +.....+...+-+++.+.+..+..|++.+ +......|..-..++..+|.+.+.. +.
T Consensus 628 ~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~l~~~lp~l~~~l~~~~~~v~~~a~~alg~i~~~~~~~~~p 707 (852)
T 4fdd_A 628 SNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQP 707 (852)
T ss_dssp CCHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHGGGGGG
T ss_pred CcHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhHhHHH
Confidence 3578999999987 45667799999999999999998886665 3333445566566666666543322 22
Q ss_pred hHHHHHHHHHhhCCCCcchhhhHHHHH-----HHHhhccCCCccccccc
Q psy17028 86 KAQDALNFILAHLPKADRSSQSVLLRE-----ATLLCSTYPVLCTDKML 129 (334)
Q Consensus 86 ~a~~~L~~l~~~L~~~d~~~~~~Ll~E-----i~~l~~~~p~ll~~~~~ 129 (334)
-...-|.-|+.-|.+.+ -+--++| |-+|+..+|..+.+++-
T Consensus 708 ~~~~il~~L~~~l~~~~---~~~~~~~~a~~~igrl~~~~~~~~~~~l~ 753 (852)
T 4fdd_A 708 YIPMVLHQLVEIINRPN---TPKTLLENTAITIGRLGYVCPQEVAPMLQ 753 (852)
T ss_dssp GTHHHHHHHHHHHTCSS---CCHHHHHHHHHHHHHHHHHCHHHHGGGHH
T ss_pred HHHHHHHHHHHHhCCCC---CCchHHHHHHHHHHHHHHhCHHHhCccHH
Confidence 33455666666665533 1222334 67788888887766543
No 127
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=55.04 E-value=49 Score=30.46 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=68.7
Q ss_pred hhHHHHHhhccCc--hhhHHHHHHHHHHhhcCCch---h--hhchHHHHHhhh--cCchhHHHHHHHHHhhccCC-----
Q psy17028 18 ASLPQLCEYLATN--STILATMQIFLHLAEKRPQL---L--VDYVPKLKQANE--GNANTLCVTVQVVAAVGRLN----- 83 (334)
Q Consensus 18 ~~vp~L~~~L~~~--~~~~~~l~il~~ia~~~p~~---l--~~~l~~~k~~~~--~~p~~~~~~aki~gavG~~~----- 83 (334)
..||.|+..|.++ .....++.+|.+++...|.. + .+.+|.+-..-. .++.+...++..++.+.+-+
T Consensus 107 ~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~ 186 (450)
T 2jdq_A 107 GAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPE 186 (450)
T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCC
T ss_pred CCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4799999999864 55677999999999877532 1 245666666555 46888889999999888654
Q ss_pred hhhHHHHHHHHHhhCCCCcchhhhHHHHHHHHhhc
Q psy17028 84 KDKAQDALNFILAHLPKADRSSQSVLLREATLLCS 118 (334)
Q Consensus 84 ~~~a~~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~ 118 (334)
......++..|++.|..-|-......+.=+.+|+.
T Consensus 187 ~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~ 221 (450)
T 2jdq_A 187 FAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSD 221 (450)
T ss_dssp GGGTGGGHHHHHHHTTCCCHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHC
Confidence 23346678888888876554333333333445554
No 128
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=54.80 E-value=44 Score=30.79 Aligned_cols=104 Identities=12% Similarity=0.091 Sum_probs=68.7
Q ss_pred HHHhhHHHHHhhccCc--hhhHHHHHHHHHHhhcCCchh-----hhchHHHHHh-hhcCchhHHHHHHHHHhhccCChhh
Q psy17028 15 LLEASLPQLCEYLATN--STILATMQIFLHLAEKRPQLL-----VDYVPKLKQA-NEGNANTLCVTVQVVAAVGRLNKDK 86 (334)
Q Consensus 15 ~l~~~vp~L~~~L~~~--~~~~~~l~il~~ia~~~p~~l-----~~~l~~~k~~-~~~~p~~~~~~aki~gavG~~~~~~ 86 (334)
++...||.|+..|.++ .....+..+|.+++...+... .+.+|.+-.. .+..|.+...++.+++.+..-+++.
T Consensus 189 ~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~ 268 (450)
T 2jdq_A 189 KVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQ 268 (450)
T ss_dssp GTGGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred HHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHH
Confidence 4577899999999854 445567888999988664321 1234544333 3457788888999999998877765
Q ss_pred HH-----HHHHHHHhhCCCCcchhhhHHHHHHHHhhc
Q psy17028 87 AQ-----DALNFILAHLPKADRSSQSVLLREATLLCS 118 (334)
Q Consensus 87 a~-----~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~ 118 (334)
.+ ..+..|++.|...+......-+.=+.+|+.
T Consensus 269 ~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~ 305 (450)
T 2jdq_A 269 TQVILNCSALQSLLHLLSSPKESIKKEACWTISNITA 305 (450)
T ss_dssp HHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence 44 367888888877554444444444455553
No 129
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=53.95 E-value=31 Score=33.12 Aligned_cols=85 Identities=13% Similarity=0.140 Sum_probs=64.5
Q ss_pred HHHHHhhHHHHHhhcc--CchhhHHHHHHHHHHhhcCCchhhhchHHHHHhh-hcCchhHHHHHHHHHhhccCChhhHHH
Q psy17028 13 YKLLEASLPQLCEYLA--TNSTILATMQIFLHLAEKRPQLLVDYVPKLKQAN-EGNANTLCVTVQVVAAVGRLNKDKAQD 89 (334)
Q Consensus 13 ~~~l~~~vp~L~~~L~--~~~~~~~~l~il~~ia~~~p~~l~~~l~~~k~~~-~~~p~~~~~~aki~gavG~~~~~~a~~ 89 (334)
+++++...|.+-..|. +|.-+..++-...++-...|+..-.|++.+++.- +++|..++.+...+--+.+-+ +.
T Consensus 134 ~~m~~~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe~v~~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~~d----~~ 209 (355)
T 3tjz_B 134 STMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKND----RL 209 (355)
T ss_dssp TTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHHHHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHTTC----HH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhhc----hH
Confidence 3566777777777776 4556667777788999999999999999988765 678888877666666665443 56
Q ss_pred HHHHHHhhCCCC
Q psy17028 90 ALNFILAHLPKA 101 (334)
Q Consensus 90 ~L~~l~~~L~~~ 101 (334)
++.+|+.+|...
T Consensus 210 a~~kLv~~l~~~ 221 (355)
T 3tjz_B 210 AVSKMISKFTRH 221 (355)
T ss_dssp HHHHHHHHHHSS
T ss_pred HHHHHHHHHhcC
Confidence 899999998774
No 130
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=53.55 E-value=83 Score=30.24 Aligned_cols=105 Identities=10% Similarity=0.099 Sum_probs=69.3
Q ss_pred HHHHhhHHHHHhhccCch--hhHHHHHHHHHHhhcCCchhh-----hchHHHHHhh-hcCchhHHHHHHHHHhhccCChh
Q psy17028 14 KLLEASLPQLCEYLATNS--TILATMQIFLHLAEKRPQLLV-----DYVPKLKQAN-EGNANTLCVTVQVVAAVGRLNKD 85 (334)
Q Consensus 14 ~~l~~~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~~l~-----~~l~~~k~~~-~~~p~~~~~~aki~gavG~~~~~ 85 (334)
......+|.|+..|.++. ....++.+|.+++...|.... +.+|.|-..- +..+.+...++.++|.+..-+++
T Consensus 253 ~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~ 332 (530)
T 1wa5_B 253 SVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDL 332 (530)
T ss_dssp HHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHH
Confidence 456778999999998654 455688999999987664322 3455554443 45677888888999999877766
Q ss_pred hHH-----HHHHHHHhhCCCCcchhhhHHHHHHHHhhc
Q psy17028 86 KAQ-----DALNFILAHLPKADRSSQSVLLREATLLCS 118 (334)
Q Consensus 86 ~a~-----~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~ 118 (334)
..+ ..+..|++.|...+......-+.=+.+|+.
T Consensus 333 ~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~ 370 (530)
T 1wa5_B 333 QTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITA 370 (530)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence 544 356788888877543333333333444543
No 131
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=51.36 E-value=73 Score=28.92 Aligned_cols=117 Identities=18% Similarity=0.217 Sum_probs=75.6
Q ss_pred HhhHHHHHhhccCch--hhHHHHHHHHHHhhcCCchhhhchHHHH---HhhhcCchhHHHHHHHHHhhccCChhhHHHHH
Q psy17028 17 EASLPQLCEYLATNS--TILATMQIFLHLAEKRPQLLVDYVPKLK---QANEGNANTLCVTVQVVAAVGRLNKDKAQDAL 91 (334)
Q Consensus 17 ~~~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~~l~~~l~~~k---~~~~~~p~~~~~~aki~gavG~~~~~~a~~~L 91 (334)
+..+.+++++|-|-- -..-+|.++..++...|++....+..|- ..-|+-|-+- -+|+-+|.+.++..|--+.-.
T Consensus 31 ~~~l~~lI~~LDDDlwtV~kNAl~vi~~i~~~~~el~epl~~kL~vm~~ksEaIpltq-eIa~a~G~la~i~Pe~v~~vV 109 (253)
T 2db0_A 31 ESVLKKLIELLDDDLWTVVKNAISIIMVIAKTREDLYEPMLKKLFSLLKKSEAIPLTQ-EIAKAFGQMAKEKPELVKSMI 109 (253)
T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHCCSHHHHH-HHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccCchHH-HHHHHHhHHHHhCHHHHHhhH
Confidence 457889999998765 4455899999999999998776644432 2234445432 356777777777777777777
Q ss_pred HHHHhhCCCCcch---hhhHHHHHHHHhhccCCCcccccccceeecccc
Q psy17028 92 NFILAHLPKADRS---SQSVLLREATLLCSTYPVLCTDKMLAEVWQCSR 137 (334)
Q Consensus 92 ~~l~~~L~~~d~~---~~~~Ll~Ei~~l~~~~p~ll~~~~~~~~r~~~~ 137 (334)
-.|+..+.-.|-- ..+.-|-||- -+||.+++.-.+|+.-|-.|
T Consensus 110 p~lfanyrigd~kikIn~~yaLeeIa---ranP~l~~~v~rdi~smlts 155 (253)
T 2db0_A 110 PVLFANYRIGDEKTKINVSYALEEIA---KANPMLMASIVRDFMSMLSS 155 (253)
T ss_dssp HHHHHHSCCCSHHHHHHHHHHHHHHH---HHCHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHhcCCccceecHHHHHHHHH---HhChHHHHHHHHHHHHHhcC
Confidence 7777666655422 2334455543 46777777666666555444
No 132
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=50.63 E-value=26 Score=25.10 Aligned_cols=50 Identities=10% Similarity=0.202 Sum_probs=37.3
Q ss_pred HHHHHhhccCchhhHHHHHHHHHHhhcCCchhhhchHHHHHhhhcCchhHHHHHHHHHhhccC
Q psy17028 20 LPQLCEYLATNSTILATMQIFLHLAEKRPQLLVDYVPKLKQANEGNANTLCVTVQVVAAVGRL 82 (334)
Q Consensus 20 vp~L~~~L~~~~~~~~~l~il~~ia~~~p~~l~~~l~~~k~~~~~~p~~~~~~aki~gavG~~ 82 (334)
=|-+..+|.|| .++++|.++.+ .|..+.+|+ .+|.+...+.+++|..|.+
T Consensus 11 dPe~~~~m~dP----~~~~~lq~i~~-NP~~~~~~~--------~dP~v~~~~~~L~~~~~g~ 60 (62)
T 2lnm_A 11 NPDVAMAFQNP----RVQAALMECSE-NPMNIMKYQ--------NDKEVMDVFNKISQLFPGM 60 (62)
T ss_dssp SHHHHHHTTSH----HHHHHHHHHTT-CGGGHHHHT--------TCHHHHHHHHHHHHHSSSC
T ss_pred ChHHHHHcCCH----HHHHHHHHHHH-CHHHHHHHH--------hChHHHHHHHHHHHHhCCC
Confidence 46777888887 45677777765 799998876 3788877777877777655
No 133
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=49.44 E-value=60 Score=31.24 Aligned_cols=102 Identities=19% Similarity=0.196 Sum_probs=68.5
Q ss_pred hhHHHHHhhccCc---hhhHHHHHHHHHHhhcCCchh-----hhchHHHHHhh-hcCchhHHHHHHHHHhhccCChhhH-
Q psy17028 18 ASLPQLCEYLATN---STILATMQIFLHLAEKRPQLL-----VDYVPKLKQAN-EGNANTLCVTVQVVAAVGRLNKDKA- 87 (334)
Q Consensus 18 ~~vp~L~~~L~~~---~~~~~~l~il~~ia~~~p~~l-----~~~l~~~k~~~-~~~p~~~~~~aki~gavG~~~~~~a- 87 (334)
..||.|+..|.++ .....++.+|.+++...|..- .+.+|.+-+.- ..+|.+...++..++.+..-+.+-.
T Consensus 130 g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~ 209 (530)
T 1wa5_B 130 GVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRD 209 (530)
T ss_dssp TCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchH
Confidence 4799999999865 355668899999998765322 23355544333 4578888899999999887654321
Q ss_pred ----HHHHHHHHhhCCCCcchhhhHHHHHHHHhhcc
Q psy17028 88 ----QDALNFILAHLPKADRSSQSVLLREATLLCST 119 (334)
Q Consensus 88 ----~~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~ 119 (334)
..++..|++.|...+.......+.=+.+||..
T Consensus 210 ~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~ 245 (530)
T 1wa5_B 210 YVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRG 245 (530)
T ss_dssp HHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCC
Confidence 23578888888775544444455555666654
No 134
>2ajw_A Alpha-conotoxin MII; alpha-helix, cyclic backbone; NMR {Synthetic}
Probab=48.99 E-value=4.6 Score=24.18 Aligned_cols=9 Identities=67% Similarity=1.258 Sum_probs=7.4
Q ss_pred ccCCCcchH
Q psy17028 5 YHPNLCGGY 13 (334)
Q Consensus 5 ~~~~~~~~~ 13 (334)
-|.|||||.
T Consensus 11 ehsnlcgga 19 (26)
T 2ajw_A 11 EHSNLCGGA 19 (26)
T ss_dssp HTTTGGGTS
T ss_pred eeccccccc
Confidence 388999985
No 135
>3ut4_A CTHE_2751, putative uncharacterized protein; non PFAM singleton, helical fold, unknown function; 2.03A {Clostridium thermocellum} PDB: 3ut8_A 3ut7_A
Probab=48.21 E-value=81 Score=26.36 Aligned_cols=81 Identities=10% Similarity=0.052 Sum_probs=52.4
Q ss_pred hHHHHHhhHHHHHhhccCchhhHH--HHHHHHHHhhcCCchhhhchHHHHHhhhcCchhHHHHHHHHHhhccCChhhHHH
Q psy17028 12 GYKLLEASLPQLCEYLATNSTILA--TMQIFLHLAEKRPQLLVDYVPKLKQANEGNANTLCVTVQVVAAVGRLNKDKAQD 89 (334)
Q Consensus 12 ~~~~l~~~vp~L~~~L~~~~~~~~--~l~il~~ia~~~p~~l~~~l~~~k~~~~~~p~~~~~~aki~gavG~~~~~~a~~ 89 (334)
|.+-+++++|.|++.|.|..--.+ +..+|.. .|. .++..+.+|+ =.=|..+---
T Consensus 25 ~~~~i~p~lp~LL~WLQD~NWPvA~~i~~~L~~----~~~-----------------~l~p~I~~vl---~s~D~~W~yw 80 (134)
T 3ut4_A 25 IDNEIEPIIFDLLKWLQDYNWPIAKDILPVVVL----HQS-----------------IAMPHILTIL---QGNDIMWKYW 80 (134)
T ss_dssp CHHHHHHHHHHHHGGGSCTTSTTHHHHHHHHHH----THH-----------------HHHHHHHHHH---HSSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHH----ccH-----------------hhHHHHHHHH---HcCChHHHHH
Confidence 566889999999999999764322 2222221 111 2333333344 2334457888
Q ss_pred HHHHHHhhCCCCcchhhhHHHHHHHHhhcc
Q psy17028 90 ALNFILAHLPKADRSSQSVLLREATLLCST 119 (334)
Q Consensus 90 ~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~ 119 (334)
+|.||+.+++. ...-.|.-|+++|+..
T Consensus 81 il~~lv~~~~~---~~~~~l~~eL~rl~~~ 107 (134)
T 3ut4_A 81 VIKLMIPYLIY---PNKQLVKSELERLSSL 107 (134)
T ss_dssp HHHHHGGGCCH---HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCH---HHHHHHHHHHHHHHhC
Confidence 88898888876 5678888999998864
No 136
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=47.63 E-value=38 Score=34.89 Aligned_cols=108 Identities=17% Similarity=0.130 Sum_probs=67.9
Q ss_pred HHHHHhhHHHHHhhccC--chhhHHHHHHHHHHhhcCCchhhhchH----HHH-HhhhcCchhHHHHHHHHHhhccCC--
Q psy17028 13 YKLLEASLPQLCEYLAT--NSTILATMQIFLHLAEKRPQLLVDYVP----KLK-QANEGNANTLCVTVQVVAAVGRLN-- 83 (334)
Q Consensus 13 ~~~l~~~vp~L~~~L~~--~~~~~~~l~il~~ia~~~p~~l~~~l~----~~k-~~~~~~p~~~~~~aki~gavG~~~-- 83 (334)
.+++...+|.+...|.+ +....+++..|..|++..+..+..+++ .+. ...+.+|.+-..++..+|.++...
T Consensus 354 ~~~~~~l~~~l~~~l~~~~~~~R~aa~~alg~i~~~~~~~~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~ 433 (852)
T 4fdd_A 354 DELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS 433 (852)
T ss_dssp GGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHTTTTTHHHHGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 45777788888888875 456678999999999887766555543 332 235567777777888877766532
Q ss_pred ---hhhHHHHHHHHHhhCCCCcchhhhHHHHHHHHhhccC
Q psy17028 84 ---KDKAQDALNFILAHLPKADRSSQSVLLREATLLCSTY 120 (334)
Q Consensus 84 ---~~~a~~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~ 120 (334)
+..-...+..|++.|..-+-.-+..-..=+.++|...
T Consensus 434 ~~~~~~~~~ll~~L~~~L~d~~~~vr~~a~~aL~~l~~~~ 473 (852)
T 4fdd_A 434 QPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEA 473 (852)
T ss_dssp SCTTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh
Confidence 2234566777777775433333333333344455443
No 137
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=47.00 E-value=34 Score=31.10 Aligned_cols=82 Identities=24% Similarity=0.376 Sum_probs=53.0
Q ss_pred HHHHHhhHHHHHhhccCchhhHH---HHHHHHHHhhcCCchhhhchHH-------------------HHHhhhcCchhHH
Q psy17028 13 YKLLEASLPQLCEYLATNSTILA---TMQIFLHLAEKRPQLLVDYVPK-------------------LKQANEGNANTLC 70 (334)
Q Consensus 13 ~~~l~~~vp~L~~~L~~~~~~~~---~l~il~~ia~~~p~~l~~~l~~-------------------~k~~~~~~p~~~~ 70 (334)
|++.++.+.-|+.-|+-+-+.+. +-..|.-+|.-+|+...+.+|. |-+++..||.+++
T Consensus 64 ~el~epl~~kL~vm~~ksEaIpltqeIa~a~G~la~i~Pe~v~~vVp~lfanyrigd~kikIn~~yaLeeIaranP~l~~ 143 (253)
T 2db0_A 64 EDLYEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVKSMIPVLFANYRIGDEKTKINVSYALEEIAKANPMLMA 143 (253)
T ss_dssp GGGHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcccCchHHHHHHHHhHHHHhCHHHHHhhHHHHHHHHhcCCccceecHHHHHHHHHHhChHHHH
Confidence 35566666677777666555554 3344555666667666666554 4467788888888
Q ss_pred HHHHHHHhhccCChhhHH--HHHHHHH
Q psy17028 71 VTVQVVAAVGRLNKDKAQ--DALNFIL 95 (334)
Q Consensus 71 ~~aki~gavG~~~~~~a~--~~L~~l~ 95 (334)
.+++=++..-- |+++.- .||+|+-
T Consensus 144 ~v~rdi~smlt-skd~~Dkl~aLnFi~ 169 (253)
T 2db0_A 144 SIVRDFMSMLS-SKNREDKLTALNFIE 169 (253)
T ss_dssp HHHHHHHHHTS-CSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCChHHHHHHHHHHH
Confidence 88887777665 665443 3478774
No 138
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=46.19 E-value=1.1e+02 Score=29.20 Aligned_cols=103 Identities=11% Similarity=0.082 Sum_probs=66.7
Q ss_pred HHhhHHHHHhhccCc--hhhHHHHHHHHHHhhcCC-ch---h--hhchHHHHHhhhc--CchhHHHHHHHHHhhccCChh
Q psy17028 16 LEASLPQLCEYLATN--STILATMQIFLHLAEKRP-QL---L--VDYVPKLKQANEG--NANTLCVTVQVVAAVGRLNKD 85 (334)
Q Consensus 16 l~~~vp~L~~~L~~~--~~~~~~l~il~~ia~~~p-~~---l--~~~l~~~k~~~~~--~p~~~~~~aki~gavG~~~~~ 85 (334)
....||.|+..|.++ .....++..|.+++...+ .. + .+.+|.|-+.-.. +|.+--.++.+++.++.-+.+
T Consensus 72 ~~~~l~~lv~~L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~ 151 (528)
T 4b8j_A 72 KLESLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSE 151 (528)
T ss_dssp ---CHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHH
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHH
Confidence 456799999999854 444557888888877665 11 1 2346766655543 388888999999999987665
Q ss_pred hHH-----HHHHHHHhhCCCCcchhhhHHHHHHHHhhc
Q psy17028 86 KAQ-----DALNFILAHLPKADRSSQSVLLREATLLCS 118 (334)
Q Consensus 86 ~a~-----~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~ 118 (334)
..+ .++..|++.|.+-+-..+..-+.=+.+|+.
T Consensus 152 ~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~ 189 (528)
T 4b8j_A 152 NTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAG 189 (528)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhC
Confidence 333 378889999987544433333333445554
No 139
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=44.97 E-value=63 Score=26.68 Aligned_cols=57 Identities=9% Similarity=0.105 Sum_probs=27.6
Q ss_pred hhHHHHHhhccCch--hhHHHHHHHHHHhhcCCchhhhchHHHHH-hhhcCchhHHHHHHHHHhhc
Q psy17028 18 ASLPQLCEYLATNS--TILATMQIFLHLAEKRPQLLVDYVPKLKQ-ANEGNANTLCVTVQVVAAVG 80 (334)
Q Consensus 18 ~~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~~l~~~l~~~k~-~~~~~p~~~~~~aki~gavG 80 (334)
..+|.|+..|.|+. ....++..|..+.. |.. +|.|.+ ..+.+|.+-..++..+|.+|
T Consensus 81 ~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--~~~----~~~L~~~l~d~~~~vr~~a~~aL~~~~ 140 (211)
T 3ltm_A 81 RAVEPLIKALKDEDGWVRQSAAVALGQIGD--ERA----VEPLIKALKDEDWFVRIAAAFALGEIG 140 (211)
T ss_dssp GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--GGG----HHHHHHHTTCSSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--HHH----HHHHHHHHhCCCHHHHHHHHHHHHHcC
Confidence 35666666666443 33445555555532 222 222222 23455555556666666555
No 140
>3voq_A Target of rapamycin complex 2 subunit mapkap1; PH domain, membrane protein; 2.00A {Homo sapiens}
Probab=43.49 E-value=35 Score=28.34 Aligned_cols=78 Identities=9% Similarity=0.181 Sum_probs=50.4
Q ss_pred eeEEEEEeCCeeEEec-C-C-------CCCccceEEcCCeeEEEecCCCCCCCceEEEE--eCC--eEEEEEcCCHHHHH
Q psy17028 238 RTRYFTLSGAHLSYKG-S-K-------EDKQETPIDVHRIRSVKVSRGARNIPKAFEIF--TGD--DSLILKPKNGKNAE 304 (334)
Q Consensus 238 KrRwFVL~~~~L~Yk~-~-~-------~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~--T~~--RTy~L~AdS~ee~~ 304 (334)
..|=+.++|+.+.-.- + + ...-..+++++.+..+++.+...+-...|.|+ ... +.|.|.|++ ++++
T Consensus 30 te~~L~IdGd~ihI~P~~~~k~~~kf~~~~K~ts~~~~~Vv~Ckvs~~~p~s~~~Fklv~~~~~~~KryDFEa~~-~~A~ 108 (125)
T 3voq_A 30 TDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDA-ATVN 108 (125)
T ss_dssp EEEEEEECSSEEEEEECC------CSBCCCCCEEEEGGGEEEEEEEEECSSSCEEEEEEEEETTEEEEEEEEECH-HHHH
T ss_pred eeEEEEecCcEEEEeeccCCccccccccCCcceEEeecceEEEEeeccCCCCcceEEEEEeCCCCcccceeEcCc-ccHH
Confidence 5666777777764111 1 0 01123588898888777654321112567664 322 579999999 9999
Q ss_pred HHHHHHHHHHHh
Q psy17028 305 QWVQCLSVVVAH 316 (334)
Q Consensus 305 eWI~AI~~aIa~ 316 (334)
+=|..|+.++.-
T Consensus 109 EIV~kin~ILe~ 120 (125)
T 3voq_A 109 EIVLKVNYILES 120 (125)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHhhheee
Confidence 999999998753
No 141
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=42.53 E-value=1.6e+02 Score=28.09 Aligned_cols=101 Identities=16% Similarity=0.124 Sum_probs=70.8
Q ss_pred hHHHHHhhcc---CchhhHHHHHHHHHHhhcCCchh----hhchHHHHHh-hhcCchhHHHHHHHHHhhccCChhhHHH-
Q psy17028 19 SLPQLCEYLA---TNSTILATMQIFLHLAEKRPQLL----VDYVPKLKQA-NEGNANTLCVTVQVVAAVGRLNKDKAQD- 89 (334)
Q Consensus 19 ~vp~L~~~L~---~~~~~~~~l~il~~ia~~~p~~l----~~~l~~~k~~-~~~~p~~~~~~aki~gavG~~~~~~a~~- 89 (334)
.||.|+..|. ++.....+..+|.+++...|..- .+.+|.|-.. ....|.+...++.+++.+..-+.++.+.
T Consensus 203 ~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~ 282 (528)
T 4b8j_A 203 ALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAV 282 (528)
T ss_dssp CHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred cHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 7999999994 44555668899999998865432 3345555433 4467888999999999998877776543
Q ss_pred ----HHHHHHhhCCCCcchhhhHHHHHHHHhhcc
Q psy17028 90 ----ALNFILAHLPKADRSSQSVLLREATLLCST 119 (334)
Q Consensus 90 ----~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~ 119 (334)
++..|++.|...+-..+..-+.=+.+|+..
T Consensus 283 ~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~ 316 (528)
T 4b8j_A 283 IEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTG 316 (528)
T ss_dssp HHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTS
T ss_pred HHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcC
Confidence 466888888876655555555556666653
No 142
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=41.38 E-value=59 Score=25.18 Aligned_cols=71 Identities=10% Similarity=0.078 Sum_probs=44.2
Q ss_pred hHHHHHhhccCch--hhHHHHHHHHHHhhcCCchhhhchHHHHHhhhcCchhHHHHHHHHHhhccCChhhHHHHHHHHHh
Q psy17028 19 SLPQLCEYLATNS--TILATMQIFLHLAEKRPQLLVDYVPKLKQANEGNANTLCVTVQVVAAVGRLNKDKAQDALNFILA 96 (334)
Q Consensus 19 ~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~~l~~~l~~~k~~~~~~p~~~~~~aki~gavG~~~~~~a~~~L~~l~~ 96 (334)
.+|.|+..|.|+. ....+...|.++.. +..+...+..+ .+.+|.+-..++..+|.+|. .+++..|.+
T Consensus 43 ~~~~L~~~L~d~~~~vR~~A~~aL~~~~~--~~a~~~L~~~L---~d~~~~VR~~A~~aL~~~~~------~~a~~~L~~ 111 (131)
T 1te4_A 43 AFEPLLESLSNEDWRIRGAAAWIIGNFQD--ERAVEPLIKLL---EDDSGFVRSGAARSLEQIGG------ERVRAAMEK 111 (131)
T ss_dssp THHHHHHGGGCSCHHHHHHHHHHHGGGCS--HHHHHHHHHHH---HHCCTHHHHHHHHHHHHHCS------HHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCC--HHHHHHHHHHH---cCCCHHHHHHHHHHHHHhCc------HHHHHHHHH
Confidence 3688999998654 33445555555542 23332223222 36788888888888888882 456677777
Q ss_pred hCCC
Q psy17028 97 HLPK 100 (334)
Q Consensus 97 ~L~~ 100 (334)
.|..
T Consensus 112 ~l~d 115 (131)
T 1te4_A 112 LAET 115 (131)
T ss_dssp HTTS
T ss_pred HHhC
Confidence 7754
No 143
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=40.95 E-value=94 Score=25.58 Aligned_cols=74 Identities=11% Similarity=0.151 Sum_probs=38.5
Q ss_pred hhHHHHHhhccCchh--hHHHHHHHHHHhhcCCchhhhchHHHHHhhhcCchhHHHHHHHHHhhccCChhhHHHHHHHHH
Q psy17028 18 ASLPQLCEYLATNST--ILATMQIFLHLAEKRPQLLVDYVPKLKQANEGNANTLCVTVQVVAAVGRLNKDKAQDALNFIL 95 (334)
Q Consensus 18 ~~vp~L~~~L~~~~~--~~~~l~il~~ia~~~p~~l~~~l~~~k~~~~~~p~~~~~~aki~gavG~~~~~~a~~~L~~l~ 95 (334)
..+|.|+..|.|+.. ...++..|.++.. |..+...+.. ..+.+|.+-..+++.+|.+|. .+++..|+
T Consensus 19 ~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~--~~~~~~L~~~---l~~~~~~vr~~a~~aL~~~~~------~~~~~~L~ 87 (211)
T 3ltm_A 19 EKVEMYIKNLQDDSYYVRRAAAYALGKIGD--ERAVEPLIKA---LKDEDAWVRRAAADALGQIGD------ERAVEPLI 87 (211)
T ss_dssp GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--GGGHHHHHHH---TTCSCHHHHHHHHHHHHHHCC------GGGHHHHH
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHhCC--ccHHHHHHHH---HcCCCHHHHHHHHHHHHhhCC------HHHHHHHH
Confidence 467777777775432 3334555554432 2333222322 234566666677777776663 23455555
Q ss_pred hhCCCCc
Q psy17028 96 AHLPKAD 102 (334)
Q Consensus 96 ~~L~~~d 102 (334)
+.|..-+
T Consensus 88 ~~l~~~~ 94 (211)
T 3ltm_A 88 KALKDED 94 (211)
T ss_dssp HHTTCSS
T ss_pred HHHcCCC
Confidence 5555433
No 144
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=40.53 E-value=1.1e+02 Score=30.32 Aligned_cols=111 Identities=11% Similarity=0.115 Sum_probs=70.2
Q ss_pred cchHHHHHhhHHHHHhhcc--CchhhHHHHHHHHHHhhcCCch--hh---hchHHHHHhhh--cCchhHHHHHHHHHhhc
Q psy17028 10 CGGYKLLEASLPQLCEYLA--TNSTILATMQIFLHLAEKRPQL--LV---DYVPKLKQANE--GNANTLCVTVQVVAAVG 80 (334)
Q Consensus 10 ~~~~~~l~~~vp~L~~~L~--~~~~~~~~l~il~~ia~~~p~~--l~---~~l~~~k~~~~--~~p~~~~~~aki~gavG 80 (334)
-||.++-..+||.|+..|. |+.....++.+|.++|...+.. +. +.++.+-+.-. ..|...-.++.++..+.
T Consensus 6 ~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls 85 (644)
T 2z6h_A 6 QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLS 85 (644)
T ss_dssp ------CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHT
T ss_pred cchhhhhhchHHHHHHHHcCCCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 4566666678999999997 5667778999999999887632 11 34555544433 26778888888888776
Q ss_pred cCChhhH----HHHHHHHHhhCCCCcchhhhHHHHHHHHhhccC
Q psy17028 81 RLNKDKA----QDALNFILAHLPKADRSSQSVLLREATLLCSTY 120 (334)
Q Consensus 81 ~~~~~~a----~~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~ 120 (334)
..++-+. ..++.-|++.|.+-+-..+..-+.=+.+|+...
T Consensus 86 ~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~ 129 (644)
T 2z6h_A 86 HHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQ 129 (644)
T ss_dssp TSHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHS
T ss_pred cChhhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCc
Confidence 6543211 135778888888766555555555555666544
No 145
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=39.57 E-value=1.4e+02 Score=24.23 Aligned_cols=16 Identities=6% Similarity=0.055 Sum_probs=6.6
Q ss_pred CchhHHHHHHHHHhhc
Q psy17028 65 NANTLCVTVQVVAAVG 80 (334)
Q Consensus 65 ~p~~~~~~aki~gavG 80 (334)
+|.+-..++..+|.+|
T Consensus 120 ~~~vr~~a~~aL~~~~ 135 (201)
T 3ltj_A 120 DWFVRIAAAFALGEIG 135 (201)
T ss_dssp SHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhC
Confidence 3444444444444443
No 146
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=39.39 E-value=1.1e+02 Score=27.97 Aligned_cols=103 Identities=10% Similarity=0.083 Sum_probs=66.4
Q ss_pred hHHHHHh-hccCch--hhHHHHHHHHHHhhcCCch---hhh--chHHHHHhhhc--CchhHHHHHHHHHhhccCChhhHH
Q psy17028 19 SLPQLCE-YLATNS--TILATMQIFLHLAEKRPQL---LVD--YVPKLKQANEG--NANTLCVTVQVVAAVGRLNKDKAQ 88 (334)
Q Consensus 19 ~vp~L~~-~L~~~~--~~~~~l~il~~ia~~~p~~---l~~--~l~~~k~~~~~--~p~~~~~~aki~gavG~~~~~~a~ 88 (334)
-||.|+. .|.++. ....+..+|.++++..|.. +++ -+|.|-..-.. .+.+...++..++.+-+-+++..+
T Consensus 82 ~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~ 161 (296)
T 1xqr_A 82 GMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLL 161 (296)
T ss_dssp HHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHH
Confidence 4688888 888654 4566999999999988842 333 35655555543 466777777888877665554322
Q ss_pred -----HHHHHHHhhCCCCcchhhhHHHHHHHHhhccCC
Q psy17028 89 -----DALNFILAHLPKADRSSQSVLLREATLLCSTYP 121 (334)
Q Consensus 89 -----~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~p 121 (334)
.++..|+..|.+.|-..+.--..=+.+|++..|
T Consensus 162 ~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~ 199 (296)
T 1xqr_A 162 QFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHP 199 (296)
T ss_dssp HHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCh
Confidence 357788888877655544444444555665543
No 147
>2rrf_A Zinc finger FYVE domain-containing protein 21; zfyve21, PH, unknown function; NMR {Homo sapiens}
Probab=37.86 E-value=1.8e+02 Score=24.45 Aligned_cols=72 Identities=10% Similarity=0.121 Sum_probs=44.8
Q ss_pred EEEeCCeeE-EecCCCCCccceEEcCCeeEEEecCCC------CCCCceEEEEeCCe-------EEEEEcCC----HHHH
Q psy17028 242 FTLSGAHLS-YKGSKEDKQETPIDVHRIRSVKVSRGA------RNIPKAFEIFTGDD-------SLILKPKN----GKNA 303 (334)
Q Consensus 242 FVL~~~~L~-Yk~~~~~~p~g~I~L~~~~sV~~~~~~------~~k~~~F~I~T~~R-------Ty~L~AdS----~ee~ 303 (334)
|.|++|+-+ ..+ . ...-.|+|..+.+|.+..+. +.++-.|.|.-.+. .-...+++ .+..
T Consensus 39 CrLS~nhR~L~ld-g--dsh~eIels~I~~vqiL~eg~~~ggg~~rasGm~l~Yk~~g~~~~~ql~lt~~~d~~~~kk~s 115 (141)
T 2rrf_A 39 CRLSNNQRYLFLD-G--DSHYEIEIVHISTVQILTEGFPPGGGNARATGMFLQYTVPGTEGVTQLKLTVVEDVTVGRRQA 115 (141)
T ss_dssp EEECTTSSEEEEE-S--SSEEEEETTTCCCEECCCCSSCSSSSSCCCSCCEEEECCTTSSSCEEEEEECCCSSSCCHHHH
T ss_pred EEecCCeeEEEEc-C--CCCCcEEeeeeeEEEEeccCCCCCCCcceeeEEEEEeeCCCccceeEEEEeeccccCcchhhh
Confidence 667766543 222 1 11478999999998853211 23566777753321 23344444 6788
Q ss_pred HHHHHHHHHHHHh
Q psy17028 304 EQWVQCLSVVVAH 316 (334)
Q Consensus 304 ~eWI~AI~~aIa~ 316 (334)
-.||.|++++++.
T Consensus 116 ~aWlaAm~KA~Kl 128 (141)
T 2rrf_A 116 VAWLVAMHKAAKL 128 (141)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8899999999874
No 148
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=37.70 E-value=48 Score=34.50 Aligned_cols=46 Identities=11% Similarity=0.200 Sum_probs=40.9
Q ss_pred HHHHHhhHHHHHhhccCchhhHHHHHHHHHHhhcCCchhhhchHHH
Q psy17028 13 YKLLEASLPQLCEYLATNSTILATMQIFLHLAEKRPQLLVDYVPKL 58 (334)
Q Consensus 13 ~~~l~~~vp~L~~~L~~~~~~~~~l~il~~ia~~~p~~l~~~l~~~ 58 (334)
++.|...+|.|+..|.+|.....+-..|..++...+..|..|++.+
T Consensus 524 ~~~l~~vl~~l~~~l~~~~V~~~A~~al~~l~~~~~~~l~p~~~~i 569 (963)
T 2x19_B 524 PVMINSVLPLVLHALGNPELSVSSVSTLKKICRECKYDLPPYAANI 569 (963)
T ss_dssp HHHHTTTHHHHHHHTTCGGGHHHHHHHHHHHHHHTGGGCTTTHHHH
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 4789999999999999998888999999999998888899987765
No 149
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=36.10 E-value=40 Score=33.26 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=28.5
Q ss_pred hHHHHHhhccCc--------------hhhHHHHHHHHHHhhcCCchhhh
Q psy17028 19 SLPQLCEYLATN--------------STILATMQIFLHLAEKRPQLLVD 53 (334)
Q Consensus 19 ~vp~L~~~L~~~--------------~~~~~~l~il~~ia~~~p~~l~~ 53 (334)
|||.||.+|..+ ..-.-+...|.+|+...|.....
T Consensus 71 ~~p~lv~~l~~~~~~~~~~~~~~~~~~~~~~a~~al~ni~~~~~~~~~~ 119 (458)
T 3nmz_A 71 CLPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRG 119 (458)
T ss_dssp CHHHHHHHHTCTTCCSCC---CCCCHHHHHHHHHHHHHHHHHSCSCHHH
T ss_pred CHHHHHHHHhcccccccccccccCCHHHHHHHHHHHHHHHccCcchhHH
Confidence 899999999964 33344889999999999987665
No 150
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=35.67 E-value=1.8e+02 Score=24.63 Aligned_cols=83 Identities=14% Similarity=0.106 Sum_probs=53.9
Q ss_pred HHHhhHHHHHhhccCch--hhHHHHHHHHHHhhcCCchhhhchHHHHHhh-hcCchhHHHHHHHHHhh-ccCC-----hh
Q psy17028 15 LLEASLPQLCEYLATNS--TILATMQIFLHLAEKRPQLLVDYVPKLKQAN-EGNANTLCVTVQVVAAV-GRLN-----KD 85 (334)
Q Consensus 15 ~l~~~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p~~l~~~l~~~k~~~-~~~p~~~~~~aki~gav-G~~~-----~~ 85 (334)
.++..+|.|+..|+|+. ..+.+...|..++..-+ +...+|.+...- +.+|.+=..+..+++.+ ...+ ..
T Consensus 95 ~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~--~~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~ 172 (242)
T 2qk2_A 95 YASACVPSLLEKFKEKKPNVVTALREAIDAIYASTS--LEAQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKK 172 (242)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSC--HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC--HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHH
Confidence 56778999999999865 55777888887776543 445566654443 45777766677777663 3332 23
Q ss_pred hHHHHHHHHHhhCC
Q psy17028 86 KAQDALNFILAHLP 99 (334)
Q Consensus 86 ~a~~~L~~l~~~L~ 99 (334)
.-...+.+|++.|.
T Consensus 173 ~l~~l~p~l~~~l~ 186 (242)
T 2qk2_A 173 LLKLLTTSLVKTLN 186 (242)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 34456677777764
No 151
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=35.03 E-value=1.6e+02 Score=28.48 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=59.1
Q ss_pred hHHHHHhhccCchhh---HHHHHHHHHHhhcCCch---hhhc--hHHHHH-hhhcCchhHHHHHHHHHhhccCChhhH--
Q psy17028 19 SLPQLCEYLATNSTI---LATMQIFLHLAEKRPQL---LVDY--VPKLKQ-ANEGNANTLCVTVQVVAAVGRLNKDKA-- 87 (334)
Q Consensus 19 ~vp~L~~~L~~~~~~---~~~l~il~~ia~~~p~~---l~~~--l~~~k~-~~~~~p~~~~~~aki~gavG~~~~~~a-- 87 (334)
.||.||.+|..+... ..+..+|.+||...+.. +++. +|.|-+ ....++.+.-+++..+|.+..-+++..
T Consensus 101 ~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~ 180 (510)
T 3ul1_B 101 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 180 (510)
T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 599999999855433 34788999999887743 3332 554433 344567788888888888866554421
Q ss_pred ---HHHHHHHHhhCCCCcchhh
Q psy17028 88 ---QDALNFILAHLPKADRSSQ 106 (334)
Q Consensus 88 ---~~~L~~l~~~L~~~d~~~~ 106 (334)
..++..|+..|...+....
T Consensus 181 v~~~G~i~~Ll~lL~~~~~~~~ 202 (510)
T 3ul1_B 181 VIKHGAIDPLLALLAVPDLSTL 202 (510)
T ss_dssp HHHTTCHHHHHHHTCSSCGGGS
T ss_pred HHHcCChHHHHHHHHhccchhh
Confidence 2347889999988665443
No 152
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=32.57 E-value=90 Score=31.52 Aligned_cols=108 Identities=11% Similarity=0.113 Sum_probs=57.5
Q ss_pred HHHhhHHHHHhhccCc----hhhHHHHHHHHHHhhcCCchhhhchHHH----HHhhh-c-CchhHHHHHHHHHhhccCCh
Q psy17028 15 LLEASLPQLCEYLATN----STILATMQIFLHLAEKRPQLLVDYVPKL----KQANE-G-NANTLCVTVQVVAAVGRLNK 84 (334)
Q Consensus 15 ~l~~~vp~L~~~L~~~----~~~~~~l~il~~ia~~~p~~l~~~l~~~----k~~~~-~-~p~~~~~~aki~gavG~~~~ 84 (334)
.+...+|.|+..|.++ .....++..+..++......+..|++.+ ...-+ . +|.+-..+...+|.+.+.-.
T Consensus 603 ~~~~l~~~l~~~l~~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~ 682 (876)
T 1qgr_A 603 ISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQ 682 (876)
T ss_dssp THHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHH
Confidence 3455677777778765 3456788888888877666676665443 33322 2 45544444444444433221
Q ss_pred ----hhHHHHHHHHHhhCCC--CcchhhhHHHHHHHHhhccCCC
Q psy17028 85 ----DKAQDALNFILAHLPK--ADRSSQSVLLREATLLCSTYPV 122 (334)
Q Consensus 85 ----~~a~~~L~~l~~~L~~--~d~~~~~~Ll~Ei~~l~~~~p~ 122 (334)
....+.+..|++.|.+ .+.......+.=+..|+.+++.
T Consensus 683 ~~~~~~~~~i~~~l~~~l~~~~~~~~~~~~~~~~l~~i~~~~g~ 726 (876)
T 1qgr_A 683 SNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGG 726 (876)
T ss_dssp GGGHHHHHHHHHHHHHHHTCTTSCGGGHHHHHHHHHHHHHHHGG
T ss_pred HhhhhhHHHHHHHHHHHhCCccccHHhhHHHHHHHHHHHHHhch
Confidence 2345667777788776 2333334444434444444443
No 153
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=32.28 E-value=48 Score=28.79 Aligned_cols=58 Identities=14% Similarity=-0.003 Sum_probs=27.2
Q ss_pred HhhHHHHHhhccCchh--hHHHHHHHHHHhhcCCchhhhchHHHHH-hhhcCchhHHHHHHHHHhhc
Q psy17028 17 EASLPQLCEYLATNST--ILATMQIFLHLAEKRPQLLVDYVPKLKQ-ANEGNANTLCVTVQVVAAVG 80 (334)
Q Consensus 17 ~~~vp~L~~~L~~~~~--~~~~l~il~~ia~~~p~~l~~~l~~~k~-~~~~~p~~~~~~aki~gavG 80 (334)
...+|.|+..|.|+.. ...+...|..+.. |.. +|.|.+ ..+.+|.+-..++..+|.+|
T Consensus 127 ~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~--~~~----~~~L~~~l~d~~~~vr~~a~~aL~~~~ 187 (280)
T 1oyz_A 127 PKIVEQSQITAFDKSTNVRRATAFAISVIND--KAT----IPLLINLLKDPNGDVRNWAAFAININK 187 (280)
T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHTC-----CC----HHHHHHHHTCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHhcCC--HHH----HHHHHHHHcCCCHHHHHHHHHHHHhhc
Confidence 3456777777765542 2334445544433 222 222222 22345555555666666665
No 154
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=31.91 E-value=64 Score=28.59 Aligned_cols=63 Identities=17% Similarity=0.223 Sum_probs=40.0
Q ss_pred HHhhHHHHHhhcc--CchhhHHHHHHHHHHhhcCC---chhhhch-----HHH-HHhhhcCchhHHHHHHHHHh
Q psy17028 16 LEASLPQLCEYLA--TNSTILATMQIFLHLAEKRP---QLLVDYV-----PKL-KQANEGNANTLCVTVQVVAA 78 (334)
Q Consensus 16 l~~~vp~L~~~L~--~~~~~~~~l~il~~ia~~~p---~~l~~~l-----~~~-k~~~~~~p~~~~~~aki~ga 78 (334)
|+.++|.|+..|. +|.....+|..|..++...+ ..|..++ |.+ +-..++.|.+=..+...+|+
T Consensus 144 l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~ 217 (249)
T 2qk1_A 144 NEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAI 217 (249)
T ss_dssp THHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 6678888888887 46677789999999888777 3444444 222 23344555554444444444
No 155
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A
Probab=30.58 E-value=2.4e+02 Score=23.58 Aligned_cols=87 Identities=9% Similarity=0.095 Sum_probs=59.1
Q ss_pred cccCCCcccCCce-eEEEEEeCCeeEEecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCC------eEEEEEcC
Q psy17028 226 EKKGRWKIFKRWR-TRYFTLSGAHLSYKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD------DSLILKPK 298 (334)
Q Consensus 226 kK~G~~~~~K~WK-rRwFVL~~~~L~Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~------RTy~L~Ad 298 (334)
.++|+. |- .-.--++++.+.-.+.........++|+.+..++...+...-+..+.+++.+ ..++|+++
T Consensus 41 d~kg~i-----W~Q~m~L~v~~~~v~LlD~et~eelE~fpl~~I~~~~av~~~~~y~siLllv~q~~~~~~~~iH~FQc~ 115 (140)
T 2cy5_A 41 DSQGRV-----WAQEMLLRVSPSQVTLLDPVSKEELESYPLDAIVRCDAVMPRGRSRSLLLLVCQEPERAQPDVHFFQGL 115 (140)
T ss_dssp HHTTCC-----CCEEEEEEECSSEEEEECTTTCCEEEEEEGGGEEEEEEECCSSCSSCEEEEEECCTTCSSCEEEEEEEC
T ss_pred HHcCCc-----ccceeEEEECCCeEEEEccCccchhhcCChhhceeccccCCccccCcEEEEEEecCCCCCccEEEEEec
Confidence 456654 74 5555566777776665445567899999998876433333445677776643 26889998
Q ss_pred CHHHHHHHHHHHHHHHHhhc
Q psy17028 299 NGKNAEQWVQCLSVVVAHSQ 318 (334)
Q Consensus 299 S~ee~~eWI~AI~~aIa~~~ 318 (334)
+.. ++.=..-|++|++...
T Consensus 116 ev~-A~~v~~di~~al~~~~ 134 (140)
T 2cy5_A 116 LLG-AELIREDIQGALQNYR 134 (140)
T ss_dssp TTH-HHHHHHHHHHHHHHHC
T ss_pred ccc-HHHHHHHHHHHHHHhh
Confidence 765 6777888999987754
No 156
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=30.48 E-value=1.8e+02 Score=27.57 Aligned_cols=61 Identities=11% Similarity=0.104 Sum_probs=40.5
Q ss_pred HHHHHhhccCc--hhhHHHHHHHHHHhhcCCc--hhhhchHHHHHhhhcCchhHHHHHHHHHhhc
Q psy17028 20 LPQLCEYLATN--STILATMQIFLHLAEKRPQ--LLVDYVPKLKQANEGNANTLCVTVQVVAAVG 80 (334)
Q Consensus 20 vp~L~~~L~~~--~~~~~~l~il~~ia~~~p~--~l~~~l~~~k~~~~~~p~~~~~~aki~gavG 80 (334)
|..|+.+|.++ .....+++.|..++..-+. ...+.+|.+.+..+..+..-..+++++|.+.
T Consensus 12 i~~l~~~l~s~~~~~R~~A~~~l~~i~~~~~~~~~~~~l~~~L~~~~d~~~~vr~~~~~~L~~~~ 76 (588)
T 1b3u_A 12 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFT 76 (588)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHTHHHHHHHSCHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHTTCS
T ss_pred HHHHHHHhhcccHHHHHHHHHhHHHHHHHhCHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 77888888755 4455777778777765432 2345677777766667777677777776543
No 157
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=30.35 E-value=2.6e+02 Score=28.05 Aligned_cols=66 Identities=14% Similarity=0.126 Sum_probs=42.6
Q ss_pred HHHhhHHHHHhhccCch--hhHHHHHHHHHHhhcCC------chhhhchHHHHHhhhcCchhHHHHHHHHHhhc
Q psy17028 15 LLEASLPQLCEYLATNS--TILATMQIFLHLAEKRP------QLLVDYVPKLKQANEGNANTLCVTVQVVAAVG 80 (334)
Q Consensus 15 ~l~~~vp~L~~~L~~~~--~~~~~l~il~~ia~~~p------~~l~~~l~~~k~~~~~~p~~~~~~aki~gavG 80 (334)
.+...+|.|+..|+|+. ....++.+|..++...| ..+...+|.+-..-+..|..-..+++.++.+.
T Consensus 405 ~~~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~v~~~a~~al~~l~ 478 (876)
T 1qgr_A 405 LVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLA 478 (876)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcccHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 45667888899998865 45678888888888754 34445566665555545555445555555544
No 158
>3iqt_A Signal transduction histidine-protein kinase BARA; histidine phosphotransfer domain, HTP, structural genomics, protein structure initiative; HET: MSE BTB; 1.40A {Escherichia coli}
Probab=29.23 E-value=95 Score=24.91 Aligned_cols=67 Identities=10% Similarity=0.087 Sum_probs=46.3
Q ss_pred hHHHHHhhh--cCchhHHHHHHHHHhhccCChhhHHHHHHHHHhhCCCCcc-----hhhhHHHHHHHHhhccCC
Q psy17028 55 VPKLKQANE--GNANTLCVTVQVVAAVGRLNKDKAQDALNFILAHLPKADR-----SSQSVLLREATLLCSTYP 121 (334)
Q Consensus 55 l~~~k~~~~--~~p~~~~~~aki~gavG~~~~~~a~~~L~~l~~~L~~~d~-----~~~~~Ll~Ei~~l~~~~p 121 (334)
+..+++..+ -.+.+.-.+=||.|+.+.++-.+-+.+-..|-+.+..-+. .....|+.|+.++...-+
T Consensus 46 ~~~l~~a~~~~d~~~l~~~aHkLkGaa~~~Ga~~L~~~c~~LE~~~r~g~~~~~l~~~l~~L~del~~v~~~~~ 119 (123)
T 3iqt_A 46 RNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREAS 119 (123)
T ss_dssp HHHHHHHHTTCCCTTHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTTCCGGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444554443 2567777788999999999999988887777766654322 345667788887765543
No 159
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=28.92 E-value=2.4e+02 Score=27.25 Aligned_cols=87 Identities=16% Similarity=0.229 Sum_probs=58.8
Q ss_pred hHHHHHhhccCch---hhHHHHHHHHHHhhcCCch---hhh--chHHHH-HhhhcCchhHHHHHHHHHhhccCChhhH--
Q psy17028 19 SLPQLCEYLATNS---TILATMQIFLHLAEKRPQL---LVD--YVPKLK-QANEGNANTLCVTVQVVAAVGRLNKDKA-- 87 (334)
Q Consensus 19 ~vp~L~~~L~~~~---~~~~~l~il~~ia~~~p~~---l~~--~l~~~k-~~~~~~p~~~~~~aki~gavG~~~~~~a-- 87 (334)
.||.|+.+|.... .-..+..+|.+||...+.. +++ -+|.|- .....++.+.-+++..+|.+..-+++-.
T Consensus 120 ~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~ 199 (529)
T 3tpo_A 120 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDL 199 (529)
T ss_dssp HHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHH
Confidence 6899999997544 3344788999999887653 332 255543 3445577788888888888876665422
Q ss_pred ---HHHHHHHHhhCCCCcchh
Q psy17028 88 ---QDALNFILAHLPKADRSS 105 (334)
Q Consensus 88 ---~~~L~~l~~~L~~~d~~~ 105 (334)
..++..|+..|...+...
T Consensus 200 i~~~g~i~~Ll~lL~~~~~~~ 220 (529)
T 3tpo_A 200 VIKHGAIDPLLALLAVPDLST 220 (529)
T ss_dssp HHHTTCHHHHHHTTCSSCGGG
T ss_pred HHHcCCcHHHHHHHhccchhH
Confidence 124788999998766543
No 160
>1hyw_A GPW, head-TO-tail joining protein W; novel fold, two helices, one two-stranded beta-sheet, viral protein; NMR {Enterobacteria phage lambda} SCOP: d.186.1.1 PDB: 2l6q_A 2l6r_A
Probab=28.18 E-value=62 Score=23.95 Aligned_cols=37 Identities=8% Similarity=0.151 Sum_probs=29.9
Q ss_pred EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhhccc
Q psy17028 284 FEIFTGDDSLILKPKNGKNAEQWVQCLSVVVAHSQAK 320 (334)
Q Consensus 284 F~I~T~~RTy~L~AdS~ee~~eWI~AI~~aIa~~~~k 320 (334)
-.|.-++|+..+...|.++...+|+-|+..++.+..+
T Consensus 24 vsV~ydgr~V~Y~~asi~~L~~~I~~le~~Lg~~~~r 60 (68)
T 1hyw_A 24 ATVQKDGRRVEFTATSVSDLKKYIAELEVQTGMTQRR 60 (68)
T ss_dssp EEEECSSCEEEECTTTHHHHHHHHHHHHHHTTTTC--
T ss_pred EEEEECCEEEEEecCCHHHHHHHHHHHHHHhcccCCC
Confidence 4455568999999999999999999999998775443
No 161
>3myf_A Sensor protein; HPT, histidine kinase, PSI, MCSG, structural genomics, midwe for structural genomics, protein structure initiative, TRAN; HET: MSE; 1.80A {Shewanella SP}
Probab=26.02 E-value=1.7e+02 Score=23.07 Aligned_cols=68 Identities=21% Similarity=0.079 Sum_probs=46.2
Q ss_pred hHHHHHhhhc--CchhHHHHHHHHHhhccCChhhHHHHHHHHHhhCCCCcc-----hhhhHHHHHHHHhhccCCC
Q psy17028 55 VPKLKQANEG--NANTLCVTVQVVAAVGRLNKDKAQDALNFILAHLPKADR-----SSQSVLLREATLLCSTYPV 122 (334)
Q Consensus 55 l~~~k~~~~~--~p~~~~~~aki~gavG~~~~~~a~~~L~~l~~~L~~~d~-----~~~~~Ll~Ei~~l~~~~p~ 122 (334)
+..++++.+. .+.+.-.+=|+.|+.+.++-.+-+.+-..|-+.+..-.. .....|+.|+..+..+-..
T Consensus 37 ~~~l~~a~~~~d~~~l~~~aHkLkGaa~~~Ga~~L~~~~~~LE~~~r~~~~~~~l~~~~~~L~~ei~~v~~~~~~ 111 (119)
T 3myf_A 37 VEKIQTALGQNDQATMLSTIHKLHGASCYCGVPTTQRLCQEIESALKRQTPVEDLEPEILELLDELTKVESAVKQ 111 (119)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHTTCCGGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444443332 356666777999999999999888887777766654322 4466788888887665443
No 162
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=25.82 E-value=3.2e+02 Score=24.70 Aligned_cols=86 Identities=14% Similarity=0.086 Sum_probs=56.8
Q ss_pred HHHhhHHHHHhhccC---------chhhHHHHHHHHHHhhcCCchhh-hchHHHHHh-hhcCchhHHHHHHHHHhhccCC
Q psy17028 15 LLEASLPQLCEYLAT---------NSTILATMQIFLHLAEKRPQLLV-DYVPKLKQA-NEGNANTLCVTVQVVAAVGRLN 83 (334)
Q Consensus 15 ~l~~~vp~L~~~L~~---------~~~~~~~l~il~~ia~~~p~~l~-~~l~~~k~~-~~~~p~~~~~~aki~gavG~~~ 83 (334)
.+...+|.|+..|.+ .+....+...|-.++...+..+. ..+|.+.+. .+.++..---+...+|+++...
T Consensus 318 ~~~~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~r~aal~~l~~l~~~~ 397 (462)
T 1ibr_B 318 ALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGP 397 (462)
T ss_dssp HHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSS
T ss_pred HhhhccHHHHHHHHhcccccccccchHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCC
Confidence 456788888888864 35667788888888887774433 345655543 3556777777788888887633
Q ss_pred h-----hhHHHHHHHHHhhCCC
Q psy17028 84 K-----DKAQDALNFILAHLPK 100 (334)
Q Consensus 84 ~-----~~a~~~L~~l~~~L~~ 100 (334)
. +...+.+.+|+..|..
T Consensus 398 ~~~~~~~~l~~~~~~l~~~l~d 419 (462)
T 1ibr_B 398 EPSQLKPLVIQAMPTLIELMKD 419 (462)
T ss_dssp CTTTTCTTTTTHHHHHHHGGGC
T ss_pred cHHHHHHHHHHHHHHHHHHhcC
Confidence 2 2234567777777754
No 163
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=24.03 E-value=3.6e+02 Score=26.91 Aligned_cols=65 Identities=12% Similarity=0.083 Sum_probs=37.3
Q ss_pred HHHhhHHHHHhhccCch--hhHHHHHHHHHHhhcC------CchhhhchHHHHHhhhcCchhHHHHHHHHHhh
Q psy17028 15 LLEASLPQLCEYLATNS--TILATMQIFLHLAEKR------PQLLVDYVPKLKQANEGNANTLCVTVQVVAAV 79 (334)
Q Consensus 15 ~l~~~vp~L~~~L~~~~--~~~~~l~il~~ia~~~------p~~l~~~l~~~k~~~~~~p~~~~~~aki~gav 79 (334)
.+...+|.|+..|+|+. ....++.+|..++..- +..+...+|.+-+.-...|..-..++..++.+
T Consensus 408 ~l~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~v~~~a~~al~~l 480 (861)
T 2bpt_A 408 YVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINL 480 (861)
T ss_dssp HHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Confidence 45567788888888764 3455666777776653 33455556655544443455444444444443
No 164
>3agt_A Hemerythrin-like domain protein DCRH; metal binding protein, oxygen binding, DIIRON, four-helix BU; 1.40A {Desulfovibrio vulgaris} PDB: 2awy_A 2avk_A 3agu_A 2awc_A
Probab=23.81 E-value=1.3e+02 Score=24.06 Aligned_cols=97 Identities=9% Similarity=0.080 Sum_probs=55.8
Q ss_pred cccccCCCcchHHHH-------HhhHHHHHhhccCchhhHHHHHHHHHHhhcCCchhhhc--------hHHHHHhhhcCc
Q psy17028 2 LIHYHPNLCGGYKLL-------EASLPQLCEYLATNSTILATMQIFLHLAEKRPQLLVDY--------VPKLKQANEGNA 66 (334)
Q Consensus 2 ~~~~~~~~~~~~~~l-------~~~vp~L~~~L~~~~~~~~~l~il~~ia~~~p~~l~~~--------l~~~k~~~~~~p 66 (334)
.+.+.+++. |.+.+ -..|..|...+.... .+.+..+|-++..|=..+|..= .|.+..=....-
T Consensus 6 ~~~W~~~~~-G~~~ID~qHk~L~~lin~l~~a~~~~~-~~~i~~~l~~L~~y~~~HF~~EE~lM~~~~yp~~~~H~~~H~ 83 (136)
T 3agt_A 6 LVKWSEDLA-NLPSIDTQHKRLVDYINDLYRAARRRD-MDKAREVFDALKNYAVEHFGYEERLFADYAYPEATRHKEIHR 83 (136)
T ss_dssp SCCCCGGGC-CSHHHHHHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred cCccChhhC-CCHHHHHHHHHHHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 456677777 76544 446667777666655 6677778887777766666432 122222223333
Q ss_pred hhHHHHHHHHHhhccCChhhHHHHHHHHHhhCCC
Q psy17028 67 NTLCVTVQVVAAVGRLNKDKAQDALNFILAHLPK 100 (334)
Q Consensus 67 ~~~~~~aki~gavG~~~~~~a~~~L~~l~~~L~~ 100 (334)
.++..+..+...+..-+.+-+++-+.||..+|.+
T Consensus 84 ~f~~~v~~l~~~~~~g~~~~~~~l~~~L~~Wl~~ 117 (136)
T 3agt_A 84 RFVETVLKWEKQLAAGDPEVVMTTLRGLVDWLVN 117 (136)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 4555555555555442334556667777766643
No 165
>3k7d_A Glutamate-ammonia-ligase adenylyltransferase; nucleotidyl transferase domain, ATP-binding, nucleotide-BIND nucleotidyltransferase; 2.40A {Escherichia coli}
Probab=23.25 E-value=1.2e+02 Score=30.39 Aligned_cols=68 Identities=16% Similarity=0.170 Sum_probs=50.4
Q ss_pred hHHHHHhhHHHHHhhccCchhhHHHHHHHHHHhhcCCchhhhchHHHHHhhhcCchhHHHHHHHHHhhccCCh
Q psy17028 12 GYKLLEASLPQLCEYLATNSTILATMQIFLHLAEKRPQLLVDYVPKLKQANEGNANTLCVTVQVVAAVGRLNK 84 (334)
Q Consensus 12 ~~~~l~~~vp~L~~~L~~~~~~~~~l~il~~ia~~~p~~l~~~l~~~k~~~~~~p~~~~~~aki~gavG~~~~ 84 (334)
|-+.|...+|.|++.|.+...-+.+|.-+..+.+.-|.- ..|+.-| ..+|.++...++|+|+=..+.+
T Consensus 52 ~r~~l~~l~P~ll~~l~~~~dpd~aL~~~~~l~~~~~~~-~~~l~lL----~~~p~~~~~L~~ll~~S~~la~ 119 (498)
T 3k7d_A 52 GRQVLDHLMPHLLSDVCAREDAAVTLSRITALLVGIVTR-TTYLELL----SEFPAALKHLISLCAASPMIAS 119 (498)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHTTC-HHHHHHH----HHCHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCh-HHHHHHH----HhChHHHHHHHHHHHhHHHHHH
Confidence 346899999999999999999999999999998775542 2233322 2488888888888887444333
No 166
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=22.50 E-value=1.2e+02 Score=29.36 Aligned_cols=86 Identities=10% Similarity=0.135 Sum_probs=63.6
Q ss_pred HHHHHHHHhh-cCCchhhhchHHHHHhhh-cCchhHHHHHHHHHhhccCChhhHHHHHHHHHhhCCCCcchhhhHHHHHH
Q psy17028 36 TMQIFLHLAE-KRPQLLVDYVPKLKQANE-GNANTLCVTVQVVAAVGRLNKDKAQDALNFILAHLPKADRSSQSVLLREA 113 (334)
Q Consensus 36 ~l~il~~ia~-~~p~~l~~~l~~~k~~~~-~~p~~~~~~aki~gavG~~~~~~a~~~L~~l~~~L~~~d~~~~~~Ll~Ei 113 (334)
.|.=+-|+.. .+|++|.+|||.+-+... ++..+-..++..++-++.-.+|-+-.++..|...|.. ....++=+=|
T Consensus 45 ~L~q~~EL~l~~dpsLl~~fl~~il~f~~d~~~~vRk~~a~FieEa~~~~~el~~~~l~~L~~LL~d---~d~~V~K~~I 121 (386)
T 3o2t_A 45 VLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD---ENVNVVKKAI 121 (386)
T ss_dssp HHHHHHHHHHTTCGGGGGGGHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTC---SSHHHHHHHH
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCHHHHHHHH
Confidence 4444555544 679999999999987544 4666778888888888888889888888877777753 2345666668
Q ss_pred HHhhccCCCcc
Q psy17028 114 TLLCSTYPVLC 124 (334)
Q Consensus 114 ~~l~~~~p~ll 124 (334)
...++-||..|
T Consensus 122 ~~~tslYpl~f 132 (386)
T 3o2t_A 122 LTMTQLYKVAL 132 (386)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888888755
No 167
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=22.26 E-value=5.2e+02 Score=25.45 Aligned_cols=73 Identities=12% Similarity=0.230 Sum_probs=49.7
Q ss_pred eEEEEEeCCeeEEecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHH-HHHHHHh
Q psy17028 239 TRYFTLSGAHLSYKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGDDSLILKPKNGKNAEQWVQC-LSVVVAH 316 (334)
Q Consensus 239 rRwFVL~~~~L~Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~RTy~L~AdS~ee~~eWI~A-I~~aIa~ 316 (334)
.-|..+...++...+.....+...++.+.+.++.... ...|.|.+.++.|.|.++..+++..=|.. |+..+.+
T Consensus 467 ~l~LgV~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~~-----~~~f~i~~~~~~l~f~T~qa~~i~~LI~~Yi~~l~~~ 540 (555)
T 3au4_A 467 ELWLGVSADAVSVYKRGEGRPLEVFQYEHILSFGAPL-----ANTYKIVVDERELLFETSEVVDVAKLMKAYISMIVKK 540 (555)
T ss_dssp EEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEEE-----TTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccceEEECCCCCeeEEEEEhhheeeecCCC-----CCEEEEEECCcEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 5567777777873333334566788888887775311 24789999898999999888888776665 3444433
No 168
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=22.14 E-value=3.2e+02 Score=29.30 Aligned_cols=116 Identities=10% Similarity=-0.048 Sum_probs=0.0
Q ss_pred HHHHHhhHHHHHhhcc--CchhhHHHHHHHHHHhhcCCc-hhhhchHHHHHh-hhcCchhHHHHHHHHHhhccCChhh--
Q psy17028 13 YKLLEASLPQLCEYLA--TNSTILATMQIFLHLAEKRPQ-LLVDYVPKLKQA-NEGNANTLCVTVQVVAAVGRLNKDK-- 86 (334)
Q Consensus 13 ~~~l~~~vp~L~~~L~--~~~~~~~~l~il~~ia~~~p~-~l~~~l~~~k~~-~~~~p~~~~~~aki~gavG~~~~~~-- 86 (334)
+......+|.|+..|. ++....++...|..++..-|. .+...++.+-.. .+..|..-..+++.++.+...-...
T Consensus 43 ~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~~~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~ 122 (1230)
T 1u6g_C 43 DDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASS 122 (1230)
T ss_dssp TTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC----
T ss_pred hhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCccc
Q ss_pred --------HHHHHHHHHhhCC-CCcchhhhHHHHHHHHhhccCCCcccccc
Q psy17028 87 --------AQDALNFILAHLP-KADRSSQSVLLREATLLCSTYPVLCTDKM 128 (334)
Q Consensus 87 --------a~~~L~~l~~~L~-~~d~~~~~~Ll~Ei~~l~~~~p~ll~~~~ 128 (334)
..+.+.+|++.+. +-+-.....-+.=+..++..++..+.++.
T Consensus 123 ~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~~~l~~~~ 173 (1230)
T 1u6g_C 123 GSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFH 173 (1230)
T ss_dssp -CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTTH
T ss_pred ccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhHhHHHHHH
No 169
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=21.79 E-value=4.1e+02 Score=24.95 Aligned_cols=69 Identities=13% Similarity=0.177 Sum_probs=43.0
Q ss_pred chHHHHHhhHHHHHhhccC--chhhHHHHHHHHHHhhcCCchh-h-hchHHHHHhhhc-CchhHHHHHHHHHhh
Q psy17028 11 GGYKLLEASLPQLCEYLAT--NSTILATMQIFLHLAEKRPQLL-V-DYVPKLKQANEG-NANTLCVTVQVVAAV 79 (334)
Q Consensus 11 ~~~~~l~~~vp~L~~~L~~--~~~~~~~l~il~~ia~~~p~~l-~-~~l~~~k~~~~~-~p~~~~~~aki~gav 79 (334)
||++.....+|.|...+.| +.....+...|.+++...|... . ..+|.+++..+. ++..=..+++++|.+
T Consensus 80 ~~~~~~~~ll~~L~~l~~~~~~~vR~~a~~~L~~l~~~~~~~~~~~~l~~~l~~l~~~~~~~~R~~a~~~l~~~ 153 (588)
T 1b3u_A 80 GGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVC 153 (588)
T ss_dssp TSGGGGGGGHHHHHHHTTSSCHHHHHHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHTCSSHHHHHHHGGGHHHH
T ss_pred CcHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 5666677788888777654 4677889999999998877532 1 235666555432 333333445555544
No 170
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=21.61 E-value=1.8e+02 Score=29.18 Aligned_cols=86 Identities=10% Similarity=0.084 Sum_probs=46.4
Q ss_pred HHHhhHHHHHhhccCc---hhhHHHHHHHHHHhhcCCchhhhchHH----HHHhh-hcCchhHHHHHHHHHhhccCCh--
Q psy17028 15 LLEASLPQLCEYLATN---STILATMQIFLHLAEKRPQLLVDYVPK----LKQAN-EGNANTLCVTVQVVAAVGRLNK-- 84 (334)
Q Consensus 15 ~l~~~vp~L~~~L~~~---~~~~~~l~il~~ia~~~p~~l~~~l~~----~k~~~-~~~p~~~~~~aki~gavG~~~~-- 84 (334)
.+...+|.++..|.++ .....++..+..++..-...+..|+|. +.+.- ...|.+...+..+++.+.+.-.
T Consensus 594 ~~~~l~~~l~~~l~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~l~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~ 673 (861)
T 2bpt_A 594 VADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEED 673 (861)
T ss_dssp GHHHHHHHHHHHHHSTTGGGTHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHHHccCCCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhchh
Confidence 4556677777777765 346677777777777766666666444 33332 2345444444444443332222
Q ss_pred --hhHHHHHHHHHhhCCC
Q psy17028 85 --DKAQDALNFILAHLPK 100 (334)
Q Consensus 85 --~~a~~~L~~l~~~L~~ 100 (334)
.-....+..|++.|..
T Consensus 674 ~~~~~~~l~~~l~~~l~~ 691 (861)
T 2bpt_A 674 FRRYSDAMMNVLAQMISN 691 (861)
T ss_dssp GHHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHhCC
Confidence 2234445555555544
No 171
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=21.02 E-value=4.4e+02 Score=26.51 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=48.2
Q ss_pred EEeCCeeEEecCCCCCccceEEcCCeeEEEecCCCCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q psy17028 243 TLSGAHLSYKGSKEDKQETPIDVHRIRSVKVSRGARNIPKAFEIFTGD-DSLILKPKNGKNAEQWVQCLSVV 313 (334)
Q Consensus 243 VL~~~~L~Yk~~~~~~p~g~I~L~~~~sV~~~~~~~~k~~~F~I~T~~-RTy~L~AdS~ee~~eWI~AI~~a 313 (334)
.|++..|.|.... ...-.|.+..+.+|+.... ....+.+.|.+.| |.+.|.-+++++..+|.+.|...
T Consensus 30 ~lTn~~LiF~~~~--~~e~wi~~~~I~~VeK~~~-~~~~~~l~I~CKDfr~~~f~f~~~~~~~~v~~sL~~~ 98 (512)
T 2yf0_A 30 YLTATHLLFIDSH--QKETWILHHHIASVEKLAL-TTSGCPLVIQCKNFRTVHFIVPRERDCHDIYNSLLQL 98 (512)
T ss_dssp EECSSEEEEEESS--SCEEEEEGGGEEEEEECCC-BTTBEEEEEEETTSCEEEEEESCHHHHHHHHHHHHHH
T ss_pred EEECCEEEEeCCC--CCceEecccceeEEEEecC-CCCCceEEEEecCCcEEEEEeCChHHHHHHHHHHHhh
Confidence 5777788765522 1224577777777764222 1233578999999 88999999999999999999775
No 172
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=20.26 E-value=2.6e+02 Score=25.41 Aligned_cols=104 Identities=10% Similarity=0.109 Sum_probs=71.4
Q ss_pred hhHHHHHhhccC---chhhHHHHHHHHHHhhcCCc---hhhh--chHHHHHhhh-cCchhHHHHHHHHHhhccCChhh--
Q psy17028 18 ASLPQLCEYLAT---NSTILATMQIFLHLAEKRPQ---LLVD--YVPKLKQANE-GNANTLCVTVQVVAAVGRLNKDK-- 86 (334)
Q Consensus 18 ~~vp~L~~~L~~---~~~~~~~l~il~~ia~~~p~---~l~~--~l~~~k~~~~-~~p~~~~~~aki~gavG~~~~~~-- 86 (334)
..||.|+..|.+ +.....++-.|-+++..+|. .|.+ -+|.|...-. ..+.+...+|..++.+-.-+.+.
T Consensus 124 g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~ 203 (296)
T 1xqr_A 124 GALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKG 203 (296)
T ss_dssp THHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred CCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHH
Confidence 378999999973 24456688899999877765 3433 4666654433 46777777777777765444442
Q ss_pred ---HHHHHHHHHhhCCCCcchhhhHHHHHHHHhhccCC
Q psy17028 87 ---AQDALNFILAHLPKADRSSQSVLLREATLLCSTYP 121 (334)
Q Consensus 87 ---a~~~L~~l~~~L~~~d~~~~~~Ll~Ei~~l~~~~p 121 (334)
-..++..|++.|.+.|...+...+.=+.+|..-.+
T Consensus 204 ~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~~~ 241 (296)
T 1xqr_A 204 TLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFP 241 (296)
T ss_dssp HHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHHHhCCh
Confidence 12368889999998888888777777777776544
Done!