Query psy17031
Match_columns 419
No_of_seqs 226 out of 2367
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 20:04:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 4E-37 1.4E-41 316.7 14.2 193 93-355 31-234 (510)
2 2ks9_A Substance-P receptor; w 100.0 7.4E-35 2.5E-39 285.6 10.8 253 96-419 34-315 (364)
3 3odu_A C-X-C chemokine recepto 100.0 8.1E-35 2.8E-39 297.2 11.3 195 88-355 42-238 (502)
4 2lnl_A C-X-C chemokine recepto 100.0 1.7E-34 5.7E-39 275.6 11.1 253 94-419 11-287 (296)
5 3vw7_A Proteinase-activated re 100.0 4.5E-34 1.6E-38 290.3 13.8 198 89-357 15-219 (484)
6 4dkl_A MU-type opioid receptor 100.0 1.5E-34 5.1E-39 291.9 9.3 256 92-419 15-449 (464)
7 1u19_A Rhodopsin; G protein-co 100.0 1.8E-34 6.2E-39 280.5 9.3 254 93-419 37-317 (349)
8 2rh1_A Beta-2-adrenergic recep 100.0 1.9E-34 6.6E-39 295.7 8.9 194 91-355 37-235 (500)
9 3uon_A Human M2 muscarinic ace 100.0 8.6E-34 2.9E-38 286.8 12.7 191 92-356 21-216 (467)
10 4ea3_A Fusion protein of nocic 100.0 1.3E-33 4.5E-38 284.3 11.6 258 90-419 121-403 (434)
11 3v2y_A Sphingosine 1-phosphate 100.0 2.4E-33 8.2E-38 289.1 7.8 184 95-356 64-249 (520)
12 3pbl_A D(3) dopamine receptor, 100.0 6.2E-33 2.1E-37 281.8 7.3 185 93-356 37-227 (481)
13 3rze_A Histamine H1 receptor, 100.0 7.9E-33 2.7E-37 278.5 6.0 190 93-356 7-201 (452)
14 3eml_A Human adenosine A2A rec 100.0 9.1E-33 3.1E-37 280.6 6.5 194 90-356 17-222 (488)
15 4amj_A Beta-1 adrenergic recep 100.0 5.7E-33 2E-37 265.5 1.0 253 92-419 9-294 (315)
16 2z73_A Rhodopsin; visual pigme 100.0 1.6E-31 5.5E-36 269.7 10.0 254 93-419 33-325 (448)
17 4eiy_A Adenosine receptor A2A/ 100.0 2.2E-32 7.6E-37 274.9 0.4 255 91-419 28-419 (447)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 1.9E-31 6.3E-36 274.4 3.2 255 90-419 178-484 (514)
19 2lnl_A C-X-C chemokine recepto 99.6 4.9E-18 1.7E-22 161.3 -2.7 203 4-302 15-234 (296)
20 4grv_A Neurotensin receptor ty 99.5 1.4E-15 4.6E-20 156.1 -0.1 128 5-224 37-168 (510)
21 3rze_A Histamine H1 receptor, 99.5 6.8E-15 2.3E-19 147.4 3.0 128 3-224 11-139 (452)
22 3v2y_A Sphingosine 1-phosphate 99.5 3E-15 1E-19 153.8 -1.8 125 4-224 67-192 (520)
23 3odu_A C-X-C chemokine recepto 99.4 1.2E-15 4E-20 155.2 -5.6 125 4-224 52-177 (502)
24 3uon_A Human M2 muscarinic ace 99.4 7.3E-15 2.5E-19 147.8 -0.3 127 4-224 27-154 (467)
25 4dkl_A MU-type opioid receptor 99.4 7E-15 2.4E-19 147.6 -0.5 125 4-223 21-146 (464)
26 3eml_A Human adenosine A2A rec 99.4 6E-15 2.1E-19 149.1 -1.3 126 3-224 24-150 (488)
27 3vw7_A Proteinase-activated re 99.4 4.1E-15 1.4E-19 150.5 -2.6 127 3-223 23-150 (484)
28 3pbl_A D(3) dopamine receptor, 99.4 1.6E-14 5.4E-19 146.0 0.0 128 4-224 42-173 (481)
29 2ks9_A Substance-P receptor; w 99.4 2.6E-14 8.9E-19 139.2 1.5 125 4-223 36-160 (364)
30 4ea3_A Fusion protein of nocic 99.4 1.5E-14 5E-19 145.1 -0.4 125 4-223 129-254 (434)
31 2rh1_A Beta-2-adrenergic recep 99.4 7.7E-15 2.6E-19 149.9 -4.3 127 4-224 44-171 (500)
32 1u19_A Rhodopsin; G protein-co 99.4 8.6E-15 2.9E-19 141.4 -5.0 126 4-223 42-167 (349)
33 4eiy_A Adenosine receptor A2A/ 99.3 1.2E-14 4E-19 145.5 -6.4 126 3-224 34-160 (447)
34 3sn6_R Lysozyme, beta-2 adrene 99.3 3.8E-14 1.3E-18 145.2 -4.3 127 4-224 186-313 (514)
35 2z73_A Rhodopsin; visual pigme 99.3 1.5E-13 5.1E-18 138.0 -0.5 125 5-223 39-165 (448)
36 4amj_A Beta-1 adrenergic recep 99.3 6.5E-14 2.2E-18 132.9 -6.4 126 4-223 15-141 (315)
37 1hll_A Alpha-2A adrenergic rec 98.1 4.4E-07 1.5E-11 55.5 0.8 25 180-204 2-26 (32)
38 2koe_A Human cannabinoid recep 97.7 2.6E-06 8.9E-11 54.8 -1.2 29 391-419 3-31 (40)
39 1hll_A Alpha-2A adrenergic rec 97.5 1.5E-05 5.2E-10 48.4 0.4 25 251-275 2-26 (32)
40 2lot_A Apelin receptor; membra 92.7 0.0018 6.3E-08 45.7 -5.5 27 5-31 33-59 (64)
41 2lot_A Apelin receptor; membra 90.3 0.016 5.5E-07 40.8 -2.7 28 96-123 30-57 (64)
42 2ki9_A Cannabinoid receptor 2; 83.2 0.066 2.2E-06 32.2 -2.5 17 360-376 13-29 (33)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=4e-37 Score=316.67 Aligned_cols=193 Identities=23% Similarity=0.364 Sum_probs=155.2
Q ss_pred cchHHHHHHHHHHHHHHhhhheeeEEeEeccc---ccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceee
Q psy17031 93 LNTEQFVILWALFILIVLGNSAVIFTLKFGVK---RRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKV 169 (419)
Q Consensus 93 ~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~---~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 169 (419)
.+....+++.+++++|++||+++++++.++++ +++++|+|+.|||++|++++++.+|..++.....
T Consensus 31 ~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~----------- 99 (510)
T 4grv_A 31 SKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWV----------- 99 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 35566778889999999999999988877654 4588999999999999999999999888754321
Q ss_pred eeeeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHH
Q psy17031 170 VRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVT 249 (419)
Q Consensus 170 ~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~ 249 (419)
...|.+|+..|++..++...+.
T Consensus 100 ----------------------------------------------------------~~~w~~g~~~C~~~~~~~~~~~ 121 (510)
T 4grv_A 100 ----------------------------------------------------------HHPWAFGDAGCRGYYFLRDACT 121 (510)
T ss_dssp ----------------------------------------------------------CSSCSSHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------CCCEEhhHHHHHHHHHHHHHHH
Confidence 1234566677888888888889
Q ss_pred HHHHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEeecCC------Cceeeccccch
Q psy17031 250 YSSTYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVRLVQGT------SQCWIEFEKPW 321 (419)
Q Consensus 250 ~~s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~------~~C~~~~~~~~ 321 (419)
.+|.+.+++|++|||.+|++|++|+. +++++..+++++|++++++++|+++..+....... ..|...++. .
T Consensus 122 ~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~ 200 (510)
T 4grv_A 122 YATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLVCTPIVDT-A 200 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGGEEEEECSCH-H
T ss_pred HHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCCcccccccccc-c
Confidence 99999999999999999999999987 88999999999999999999999988766544321 235544433 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17031 322 QWQLYMSLVALALFVIPAVIISICYILIITTIWA 355 (419)
Q Consensus 322 ~~~~~~~~~~~~~~~vp~~ii~~~y~~i~~~l~~ 355 (419)
....+..+..++.|++|+++|+++|.+|++++|+
T Consensus 201 ~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~ 234 (510)
T 4grv_A 201 TVKVVIQVNTFMSFLFPMLVISILNTVIANKLTV 234 (510)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHH
Confidence 4456666677888999999999999999998874
No 2
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=7.4e-35 Score=285.56 Aligned_cols=253 Identities=22% Similarity=0.409 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceeeeeeece
Q psy17031 96 EQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQA 175 (419)
Q Consensus 96 ~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~ 175 (419)
...+++.+++++|++||+++++++.+++++|++.|+++.|||++|++.++...|..+.....+.|
T Consensus 34 ~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~--------------- 98 (364)
T 2ks9_A 34 LWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEW--------------- 98 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSC---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc---------------
Confidence 34677889999999999999999999999999999999999999999999988887766554455
Q ss_pred eehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHHHHHHH
Q psy17031 176 VVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTYSSTYV 255 (419)
Q Consensus 176 ~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~s~~~ 255 (419)
..++..|+...++...+..++.+.
T Consensus 99 --------------------------------------------------------~~~~~~C~~~~~~~~~~~~~s~~~ 122 (364)
T 2ks9_A 99 --------------------------------------------------------YYGLFYCKFHNFFPIAAVFASIYS 122 (364)
T ss_dssp --------------------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------cchHHHHHhHHHHHHHHHHHHHHH
Confidence 455567777788888888899999
Q ss_pred HHHHHHhhheeeeccccccccchhhhHHHHHHHHHHHHHHHHHHHhheeEeecCCCceeeccccch---hHHHHHHHHHH
Q psy17031 256 LVALSIDRYYAIKYPMNFCGSWRRARWLVGIAWLISFILSIPIAVLFHVRLVQGTSQCWIEFEKPW---QWQLYMSLVAL 332 (419)
Q Consensus 256 l~~i~~~Ry~~i~~p~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~---~~~~~~~~~~~ 332 (419)
++++++|||.+|++|++++.++++....++++|+.+++.++|..........++...|..++++.. ....+.....+
T Consensus 123 l~~isidRy~aI~~P~~~~~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~ 202 (364)
T 2ks9_A 123 MTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTV 202 (364)
T ss_dssp HHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSBCCCCSCCCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEEeecCCCcchhHHHHHHHHHHHH
Confidence 999999999999999998888888999999999999999998876655555556677877665432 23456667778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCc-------------------------eEEEEEechhHHHHHHHHHhcCcC-CCch
Q psy17031 333 ALFVIPAVIISICYILIITTIWAKSK-------------------------LYTFVLCWSPYIVFDLLQVYGYIP-RTQN 386 (419)
Q Consensus 333 ~~~~vp~~ii~~~y~~i~~~l~~~~~-------------------------~~~f~~cw~P~~v~~~~~~~~~~~-~~~~ 386 (419)
+.+++|++++.++|.+|.+++||+++ +++|++||+|+.+..++....... ....
T Consensus 203 ~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~ 282 (364)
T 2ks9_A 203 LIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKF 282 (364)
T ss_dssp HHTHHHHHHHHHHHHHHHHSSCSCCCSSSSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHH
Confidence 88999999999999999999977542 688999999999998887765432 1222
Q ss_pred hhHHHHHHHHHhccccccchhhhhcccCCccCC
Q psy17031 387 YIAVATLIQSLAPLNSAANPIIYCIFRTGNNNR 419 (419)
Q Consensus 387 ~~~~~~~~~~l~~~~s~~nP~iY~~~~~~fR~~ 419 (419)
......+..+++++|+++||+||++++++|||+
T Consensus 283 ~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~ 315 (364)
T 2ks9_A 283 IQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLG 315 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 334566777899999999999999999999974
No 3
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=8.1e-35 Score=297.21 Aligned_cols=195 Identities=24% Similarity=0.326 Sum_probs=165.9
Q ss_pred ccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccce
Q psy17031 88 RTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTAC 167 (419)
Q Consensus 88 ~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C 167 (419)
+..........+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+ +..|..+..... .|
T Consensus 42 ~~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~------- 112 (502)
T 3odu_A 42 ENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NW------- 112 (502)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CC-------
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CC-------
Confidence 334445667778888999999999999999999999999999999999999999995 677776654432 34
Q ss_pred eeeeeeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHH
Q psy17031 168 KVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAV 247 (419)
Q Consensus 168 ~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~ 247 (419)
..++..|++..++...
T Consensus 113 ----------------------------------------------------------------~~~~~~C~~~~~~~~~ 128 (502)
T 3odu_A 113 ----------------------------------------------------------------YFGNFLCKAVHVIYTV 128 (502)
T ss_dssp ----------------------------------------------------------------CSHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------------------------cCCchhhhhHHHHHHH
Confidence 5555668888888888
Q ss_pred HHHHHHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEeecCCCceeeccccchhHHH
Q psy17031 248 VTYSSTYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVRLVQGTSQCWIEFEKPWQWQL 325 (419)
Q Consensus 248 ~~~~s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 325 (419)
+..++.+.+++|++|||.+|++|++|+. +++++...++++|++++++++|+++........+...|...+++......
T Consensus 129 ~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 208 (502)
T 3odu_A 129 NLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVV 208 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSSSEEEEECCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCCceEEeecCCchhHHHH
Confidence 8899999999999999999999999877 77888899999999999999999988877777777889888777766677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17031 326 YMSLVALALFVIPAVIISICYILIITTIWA 355 (419)
Q Consensus 326 ~~~~~~~~~~~vp~~ii~~~y~~i~~~l~~ 355 (419)
+.....++.+++|+++++++|.+|+++++|
T Consensus 209 ~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~ 238 (502)
T 3odu_A 209 FQFQHIMVGLILPGIVILSCYCIIISKLSH 238 (502)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 777788889999999999999999999987
No 4
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=275.56 Aligned_cols=253 Identities=24% Similarity=0.354 Sum_probs=201.3
Q ss_pred chHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceeeeeee
Q psy17031 94 NTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYS 173 (419)
Q Consensus 94 ~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 173 (419)
+....+++.+++++|++||.++++++.+++++|+++|+++.|||++|++.++. .|....... .
T Consensus 11 ~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~-~p~~~~~~~-~--------------- 73 (296)
T 2lnl_A 11 KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALT-LPIWAASKV-N--------------- 73 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHH-HHHHHHHHH-S---------------
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHh-hhHHHhhcc-C---------------
Confidence 45667888899999999999999999999999999999999999999998765 454443322 1
Q ss_pred ceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHHHHH
Q psy17031 174 QAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTYSST 253 (419)
Q Consensus 174 ~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~s~ 253 (419)
+|..|+..|+...+....+..++.
T Consensus 74 --------------------------------------------------------~~~~~~~~c~~~~~~~~~~~~~s~ 97 (296)
T 2lnl_A 74 --------------------------------------------------------GWIFGTFLCKVVSLLKEVNFYSGI 97 (296)
T ss_dssp --------------------------------------------------------SSCCSSHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------CCccchhHHHHHhhhhhhhHHHHH
Confidence 346677788888888889999999
Q ss_pred HHHHHHHHhhheeeeccccccc-cchhhhHHHHHHHHHHHHHHHHHHHhheeEeecCCCceeec---cccchhHHHHHHH
Q psy17031 254 YVLVALSIDRYYAIKYPMNFCG-SWRRARWLVGIAWLISFILSIPIAVLFHVRLVQGTSQCWIE---FEKPWQWQLYMSL 329 (419)
Q Consensus 254 ~~l~~i~~~Ry~~i~~p~~~~~-t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~---~~~~~~~~~~~~~ 329 (419)
++++++++|||.+|++|+|++. .+++....++++|+.++..++|........+.++...|... .........+...
T Consensus 98 ~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (296)
T 2lnl_A 98 LLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRIL 177 (296)
T ss_dssp HHHHHHHHHHHHHSSSCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCSCCTTTTTTHHHHT
T ss_pred HHHHHHHhhhhhhhhhccccchhhhhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeeccccchhhHHHHHHH
Confidence 9999999999999999999988 55677778889999999999998887766554443322221 1222334456666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCc-------------eEEEEEechhHHHHHHHHHhcCcCCCc-------hhhH
Q psy17031 330 VALALFVIPAVIISICYILIITTIWAKSK-------------LYTFVLCWSPYIVFDLLQVYGYIPRTQ-------NYIA 389 (419)
Q Consensus 330 ~~~~~~~vp~~ii~~~y~~i~~~l~~~~~-------------~~~f~~cw~P~~v~~~~~~~~~~~~~~-------~~~~ 389 (419)
...+.+.+|+.++..+|.++.++++|+++ +.+|.+||+|+++..+........... ....
T Consensus 178 ~~~~~~~~p~~i~~~~y~~i~~~~~~~~~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (296)
T 2lnl_A 178 PHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGR 257 (296)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTTTSSSCCCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHH
Confidence 77888999999999999999998877554 789999999999999988776432211 1123
Q ss_pred HHHHHHHHhccccccchhhhhcccCCccCC
Q psy17031 390 VATLIQSLAPLNSAANPIIYCIFRTGNNNR 419 (419)
Q Consensus 390 ~~~~~~~l~~~~s~~nP~iY~~~~~~fR~~ 419 (419)
...+..+++++||++||+||+++++||||+
T Consensus 258 ~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~ 287 (296)
T 2lnl_A 258 ALDATEILGFLHSCLNPIIYAFIGQNFRHG 287 (296)
T ss_dssp HHHHHHHHGGGGGTHHHHHHHHHCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 456778899999999999999999999974
No 5
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.5e-34 Score=290.35 Aligned_cols=198 Identities=21% Similarity=0.380 Sum_probs=156.9
Q ss_pred cccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccccccee
Q psy17031 89 TLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACK 168 (419)
Q Consensus 89 ~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~ 168 (419)
..........+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++...+........+.|
T Consensus 15 ~~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~-------- 86 (484)
T 3vw7_A 15 TSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDW-------- 86 (484)
T ss_dssp TCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCC--------
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--------
Confidence 334556677888999999999999999999999999999999999999999999976544444433333344
Q ss_pred eeeeeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHH
Q psy17031 169 VVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVV 248 (419)
Q Consensus 169 ~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~ 248 (419)
..++..|++..++...+
T Consensus 87 ---------------------------------------------------------------~~~~~~C~~~~~~~~~~ 103 (484)
T 3vw7_A 87 ---------------------------------------------------------------QFGSELCRFVTAAFYCN 103 (484)
T ss_dssp ---------------------------------------------------------------CSCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------------------ccchhHHhHHHHHHHHH
Confidence 55667788888888888
Q ss_pred HHHHHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEeecC--CCceeeccccch---
Q psy17031 249 TYSSTYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVRLVQG--TSQCWIEFEKPW--- 321 (419)
Q Consensus 249 ~~~s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~--~~~C~~~~~~~~--- 321 (419)
..++.+++++|++|||.+|++|++|+. +++++..+++++|+++++.++|+++.......++ ...|...++...
T Consensus 104 ~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 183 (484)
T 3vw7_A 104 MYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHDVLSETLLEG 183 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESSSCSSCSSCH
T ss_pred HHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeeccCCccchhH
Confidence 899999999999999999999999976 8889999999999999999999988776654433 356776665432
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy17031 322 QWQLYMSLVALALFVIPAVIISICYILIITTIWAKS 357 (419)
Q Consensus 322 ~~~~~~~~~~~~~~~vp~~ii~~~y~~i~~~l~~~~ 357 (419)
....+.....++.+++|+++++++|.+|++++|+++
T Consensus 184 ~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~ 219 (484)
T 3vw7_A 184 YYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSA 219 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhh
Confidence 333466667788899999999999999999998765
No 6
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=1.5e-34 Score=291.88 Aligned_cols=256 Identities=23% Similarity=0.409 Sum_probs=215.4
Q ss_pred ccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceeeee
Q psy17031 92 KLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKVVR 171 (419)
Q Consensus 92 ~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 171 (419)
.......+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++. .|..+.....+.|
T Consensus 15 ~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~----------- 82 (464)
T 4dkl_A 15 VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTW----------- 82 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCc-----------
Confidence 3456777888899999999999999999998999999999999999999999887 7777766555555
Q ss_pred eeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHHH
Q psy17031 172 YSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTYS 251 (419)
Q Consensus 172 ~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~ 251 (419)
..++..|++..++..++..+
T Consensus 83 ------------------------------------------------------------~~~~~~C~~~~~~~~~~~~~ 102 (464)
T 4dkl_A 83 ------------------------------------------------------------PFGNILCKIVISIDYYNMFT 102 (464)
T ss_dssp ------------------------------------------------------------CSCSHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------ccccchhhhHHHHHHHHHHH
Confidence 55667777778888888889
Q ss_pred HHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEeecCCCceeeccccchh--HHHHH
Q psy17031 252 STYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVRLVQGTSQCWIEFEKPWQ--WQLYM 327 (419)
Q Consensus 252 s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~--~~~~~ 327 (419)
+.+.++++++|||.+|++|++|+. +++++...++++|+.++++++|..+........+...|...+..... ...+.
T Consensus 103 s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 182 (464)
T 4dkl_A 103 SIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLK 182 (464)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCBCCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEEeecCCcchHHHHHHH
Confidence 999999999999999999999876 88899999999999999999999887776666677778777655433 44566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-------------------------------------------------
Q psy17031 328 SLVALALFVIPAVIISICYILIITTIWAKSK------------------------------------------------- 358 (419)
Q Consensus 328 ~~~~~~~~~vp~~ii~~~y~~i~~~l~~~~~------------------------------------------------- 358 (419)
....++.+++|+++++++|.+|++++|++++
T Consensus 183 ~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 4dkl_A 183 ICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDKAIG 262 (464)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSCSHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCCCcccccccccccccc
Confidence 7777888999999999999999998874221
Q ss_pred --------------------------------------------------------------------------------
Q psy17031 359 -------------------------------------------------------------------------------- 358 (419)
Q Consensus 359 -------------------------------------------------------------------------------- 358 (419)
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (464)
T 4dkl_A 263 RNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAV 342 (464)
T ss_dssp SCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHHHHH
T ss_pred ccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCCcccccccccchhhcccchhhc
Confidence
Q ss_pred ----------------------------------------------eEEEEEechhHHHHHHHHHhcCcCCCchhhHHHH
Q psy17031 359 ----------------------------------------------LYTFVLCWSPYIVFDLLQVYGYIPRTQNYIAVAT 392 (419)
Q Consensus 359 ----------------------------------------------~~~f~~cw~P~~v~~~~~~~~~~~~~~~~~~~~~ 392 (419)
+++|++||+|+.+..++..+...+..........
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~ 422 (464)
T 4dkl_A 343 NLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWH 422 (464)
T ss_dssp HHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHH
T ss_pred ccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHH
Confidence 6899999999999999988776555555666677
Q ss_pred HHHHHhccccccchhhhhcccCCccCC
Q psy17031 393 LIQSLAPLNSAANPIIYCIFRTGNNNR 419 (419)
Q Consensus 393 ~~~~l~~~~s~~nP~iY~~~~~~fR~~ 419 (419)
+..+++++||++||+||++++++|||+
T Consensus 423 ~~~~L~~~ns~~NPiIY~~~~~~fR~~ 449 (464)
T 4dkl_A 423 FCIALGYTNSCLNPVLYAFLDENFKRC 449 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHhhhchhHHHHHHhhHHHHHH
Confidence 888899999999999999999999974
No 7
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.8e-34 Score=280.48 Aligned_cols=254 Identities=20% Similarity=0.290 Sum_probs=206.2
Q ss_pred cchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceeeeee
Q psy17031 93 LNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRY 172 (419)
Q Consensus 93 ~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 172 (419)
......+++.+++++|++||.++++++.+++++|++.|+++.|||++|++.++...|..+.....+.|
T Consensus 37 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~------------ 104 (349)
T 1u19_A 37 QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYF------------ 104 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSC------------
T ss_pred HHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCee------------
Confidence 34456677889999999999999999999999999999999999999999999999988776655555
Q ss_pred eceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHHHH
Q psy17031 173 SQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTYSS 252 (419)
Q Consensus 173 ~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~s 252 (419)
..++..|+...++...+..++
T Consensus 105 -----------------------------------------------------------~~~~~~C~~~~~~~~~~~~~s 125 (349)
T 1u19_A 105 -----------------------------------------------------------VFGPTGCNLEGFFATLGGEIA 125 (349)
T ss_dssp -----------------------------------------------------------TTHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------eCChhHHHHHHHHHHHHHHHH
Confidence 445566777777888888899
Q ss_pred HHHHHHHHHhhheeeeccccccc-cchhhhHHHHHHHHHHHHHHHHHHHhheeE-eecCCCceeeccccc---hhHHHHH
Q psy17031 253 TYVLVALSIDRYYAIKYPMNFCG-SWRRARWLVGIAWLISFILSIPIAVLFHVR-LVQGTSQCWIEFEKP---WQWQLYM 327 (419)
Q Consensus 253 ~~~l~~i~~~Ry~~i~~p~~~~~-t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~-~~~~~~~C~~~~~~~---~~~~~~~ 327 (419)
.+.++++++|||.+|++|++++. +++++...++++|+.+++.++|+....... ..+....|..++... .....+.
T Consensus 126 ~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ 205 (349)
T 1u19_A 126 LWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFV 205 (349)
T ss_dssp HHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTTEEECCCSCCCGGGTHHHHH
T ss_pred HHHHHHHHHHHHheeeCCccceeeccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCceeecccccCccccccchHHH
Confidence 99999999999999999999876 888899999999999999999988765433 233456677665332 2345666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc----------------------eEEEEEechhHHHHHHHHHhcCcCCCc
Q psy17031 328 SLVALALFVIPAVIISICYILIITTIWAKSK----------------------LYTFVLCWSPYIVFDLLQVYGYIPRTQ 385 (419)
Q Consensus 328 ~~~~~~~~~vp~~ii~~~y~~i~~~l~~~~~----------------------~~~f~~cw~P~~v~~~~~~~~~~~~~~ 385 (419)
....++.+++|++++.++|.+|++++||+++ +++|++||+|+.+..++.......+
T Consensus 206 ~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~-- 283 (349)
T 1u19_A 206 IYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSD-- 283 (349)
T ss_dssp HHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCcc--
Confidence 6777788999999999999999999987543 5789999999999888766643222
Q ss_pred hhhHHHHHHHHHhccccccchhhhhcccCCccCC
Q psy17031 386 NYIAVATLIQSLAPLNSAANPIIYCIFRTGNNNR 419 (419)
Q Consensus 386 ~~~~~~~~~~~l~~~~s~~nP~iY~~~~~~fR~~ 419 (419)
.......+..+++++|+++||+||++++++|||+
T Consensus 284 ~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~ 317 (349)
T 1u19_A 284 FGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNC 317 (349)
T ss_dssp CCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 2233556778899999999999999999999974
No 8
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=1.9e-34 Score=295.75 Aligned_cols=194 Identities=22% Similarity=0.328 Sum_probs=151.1
Q ss_pred cccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceeee
Q psy17031 91 TKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKVV 170 (419)
Q Consensus 91 ~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 170 (419)
........+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++.+|..+.....+.|.
T Consensus 37 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~--------- 107 (500)
T 2rh1_A 37 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWT--------- 107 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCC---------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc---------
Confidence 33445567788899999999999999999988999999999999999999999999999888776655664
Q ss_pred eeeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHH
Q psy17031 171 RYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTY 250 (419)
Q Consensus 171 ~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~ 250 (419)
.++..|++..++...+..
T Consensus 108 --------------------------------------------------------------~~~~~C~~~~~~~~~~~~ 125 (500)
T 2rh1_A 108 --------------------------------------------------------------FGNFWCEFWTSIDVLCVT 125 (500)
T ss_dssp --------------------------------------------------------------SHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------CCcchhhHHHHHHHHHHH
Confidence 445667777777778888
Q ss_pred HHHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHH-HhheeEeecCCCceeeccc--cchhHHH
Q psy17031 251 SSTYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIA-VLFHVRLVQGTSQCWIEFE--KPWQWQL 325 (419)
Q Consensus 251 ~s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~-~~~~~~~~~~~~~C~~~~~--~~~~~~~ 325 (419)
++.+++++|++|||.+|++|++|+. +++++...++++|++++++++++. ..+......+...|...+. +......
T Consensus 126 ~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 205 (500)
T 2rh1_A 126 ASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQA 205 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCCCCCCHH
T ss_pred HHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCcceecccccccccchhHH
Confidence 8899999999999999999999876 888999999999999999986444 3333222222334433221 2222345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17031 326 YMSLVALALFVIPAVIISICYILIITTIWA 355 (419)
Q Consensus 326 ~~~~~~~~~~~vp~~ii~~~y~~i~~~l~~ 355 (419)
|.....++.+++|+++++++|.+|++++||
T Consensus 206 y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~ 235 (500)
T 2rh1_A 206 YAIASSIVSFYVPLVIMVFVYSRVFQEAKR 235 (500)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666777788999999999999999987653
No 9
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=8.6e-34 Score=286.79 Aligned_cols=191 Identities=24% Similarity=0.415 Sum_probs=160.2
Q ss_pred ccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceeeee
Q psy17031 92 KLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKVVR 171 (419)
Q Consensus 92 ~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 171 (419)
.......+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++..|..+.....+.|
T Consensus 21 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~----------- 89 (467)
T 3uon_A 21 FEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYW----------- 89 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----------
Confidence 445667788889999999999999999988889999999999999999999999999988877666566
Q ss_pred eeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHHH
Q psy17031 172 YSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTYS 251 (419)
Q Consensus 172 ~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~ 251 (419)
..++..|++..++...+..+
T Consensus 90 ------------------------------------------------------------~~~~~~C~~~~~~~~~~~~~ 109 (467)
T 3uon_A 90 ------------------------------------------------------------PLGPVVCDLWLALDYVVSNA 109 (467)
T ss_dssp ------------------------------------------------------------CSCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------cCCcchHhHHHHHHHHHHHH
Confidence 44556777777888888889
Q ss_pred HHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeE---eecCCCceeeccccchhHHHH
Q psy17031 252 STYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVR---LVQGTSQCWIEFEKPWQWQLY 326 (419)
Q Consensus 252 s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~---~~~~~~~C~~~~~~~~~~~~~ 326 (419)
+.+.++++++|||.+|++|++|+. +++++...++++|++++++++|+.+.+... ...+...|..++... ..+
T Consensus 110 s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~---~~~ 186 (467)
T 3uon_A 110 SVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSN---AAV 186 (467)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCGGGGS---HHH
T ss_pred HHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceeecCcc---hHH
Confidence 999999999999999999999877 888999999999999999999988765432 223455677665433 346
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy17031 327 MSLVALALFVIPAVIISICYILIITTIWAK 356 (419)
Q Consensus 327 ~~~~~~~~~~vp~~ii~~~y~~i~~~l~~~ 356 (419)
.....++.+++|+++++++|.+|++++|++
T Consensus 187 ~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~ 216 (467)
T 3uon_A 187 TFGTAIAAFYLPVIIMTVLYWHISRASKSR 216 (467)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666778889999999999999999999875
No 10
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=284.29 Aligned_cols=258 Identities=26% Similarity=0.434 Sum_probs=209.6
Q ss_pred ccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceee
Q psy17031 90 LTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKV 169 (419)
Q Consensus 90 ~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 169 (419)
....+....+++.+++++|++||+++++++.+++++|+++|+++.|||++|++. ++..|..+.....+.|
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~--------- 190 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFW--------- 190 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSC---------
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCC---------
Confidence 334556677788899999999999999999999999999999999999999988 6677777766554445
Q ss_pred eeeeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHH
Q psy17031 170 VRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVT 249 (419)
Q Consensus 170 ~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~ 249 (419)
..++..|+...++..++.
T Consensus 191 --------------------------------------------------------------~~~~~~C~~~~~~~~~~~ 208 (434)
T 4ea3_A 191 --------------------------------------------------------------PFGNALCKTVIAIDYYNM 208 (434)
T ss_dssp --------------------------------------------------------------TTHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------cCcccHHHHHHHHHHHHH
Confidence 455567777788888888
Q ss_pred HHHHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEeecCCCceeeccccch--hHHH
Q psy17031 250 YSSTYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVRLVQGTSQCWIEFEKPW--QWQL 325 (419)
Q Consensus 250 ~~s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~--~~~~ 325 (419)
.++.+.++++++|||.+|++|++|+. +++++..+++++|+.+++.++|...........+...|...++... ....
T Consensus 209 ~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 288 (434)
T 4ea3_A 209 FTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQDYWGPV 288 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEECCCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEEecCChHhHHHHH
Confidence 99999999999999999999999877 8889999999999999999999888766555556678887765443 3355
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc---------------------eEEEEEechhHHHHHHHHHhcCcCCC
Q psy17031 326 YMSLVALALFVIPAVIISICYILIITTIWAKSK---------------------LYTFVLCWSPYIVFDLLQVYGYIPRT 384 (419)
Q Consensus 326 ~~~~~~~~~~~vp~~ii~~~y~~i~~~l~~~~~---------------------~~~f~~cw~P~~v~~~~~~~~~~~~~ 384 (419)
+.....++.+++|+++++++|.+|++++|++++ +++|++||+|+.+..++...+.....
T Consensus 289 ~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~ 368 (434)
T 4ea3_A 289 FAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSS 368 (434)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch
Confidence 667778888999999999999999999998653 68899999999999988877655544
Q ss_pred chhhHHHHHHHHHhccccccchhhhhcccCCccCC
Q psy17031 385 QNYIAVATLIQSLAPLNSAANPIIYCIFRTGNNNR 419 (419)
Q Consensus 385 ~~~~~~~~~~~~l~~~~s~~nP~iY~~~~~~fR~~ 419 (419)
........+..+++++|+++||+||++++++||++
T Consensus 369 ~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~ 403 (434)
T 4ea3_A 369 ETAVAILRFCTALGYVNSCLNPILYAFLDENFKAC 403 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54555666777889999999999999999999973
No 11
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.98 E-value=2.4e-33 Score=289.10 Aligned_cols=184 Identities=23% Similarity=0.286 Sum_probs=147.8
Q ss_pred hHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceeeeeeec
Q psy17031 95 TEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQ 174 (419)
Q Consensus 95 ~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 174 (419)
....+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.++...|..+.. ....
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~--------------- 127 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATT--------------- 127 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGG---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccc---------------
Confidence 567788889999999999999999999999999999999999999999999998877654 2223
Q ss_pred eeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHHHHHH
Q psy17031 175 AVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTYSSTY 254 (419)
Q Consensus 175 ~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~s~~ 254 (419)
|..+...|++..++...+..++.+
T Consensus 128 --------------------------------------------------------~~~~~~~c~~~~~~~~~~~~~S~~ 151 (520)
T 3v2y_A 128 --------------------------------------------------------YKLTPAQWFLREGSMFVALSASVF 151 (520)
T ss_dssp --------------------------------------------------------TTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------eeeCccccchHHHHHHHHHHHHHH
Confidence 355566787777888888899999
Q ss_pred HHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEeecCCCceeeccccchhHHHHHHHHHH
Q psy17031 255 VLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVRLVQGTSQCWIEFEKPWQWQLYMSLVAL 332 (419)
Q Consensus 255 ~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~ 332 (419)
++++|++|||.+|+ |++|+. +++++..+++++|++++++++|+++.+... .+...|..+++... ..+.. ..+
T Consensus 152 ~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~--~~~~~C~~~~~~~~--~~~~~-~~~ 225 (520)
T 3v2y_A 152 SLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI--SALSSCSTVLPLYH--KHYIL-FCT 225 (520)
T ss_dssp HHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT--TCGGGBCSSSTTBB--HHHHH-HHH
T ss_pred HHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc--cCCCcccccCCccc--hHHHH-HHH
Confidence 99999999999999 999876 889999999999999999999988766543 55567876664332 23333 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Q psy17031 333 ALFVIPAVIISICYILIITTIWAK 356 (419)
Q Consensus 333 ~~~~vp~~ii~~~y~~i~~~l~~~ 356 (419)
+.|++|+++|+++|.+|++++|++
T Consensus 226 ~~~~lPl~ii~~~Y~~I~~~l~~~ 249 (520)
T 3v2y_A 226 TVFTLLLLSIVILYCRIYSLVRTR 249 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 569999999999999999988754
No 12
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.97 E-value=6.2e-33 Score=281.76 Aligned_cols=185 Identities=24% Similarity=0.408 Sum_probs=151.0
Q ss_pred cchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhc-ccccccccceeeee
Q psy17031 93 LNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSS-VTWKAGNTACKVVR 171 (419)
Q Consensus 93 ~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~-~~~~~~~~~C~~~~ 171 (419)
......+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++.+|..+..... +.|
T Consensus 37 ~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~----------- 105 (481)
T 3pbl_A 37 PHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVW----------- 105 (481)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCC-----------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-----------
Confidence 34555677889999999999999999999999999999999999999999999999987765433 334
Q ss_pred eeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHHH
Q psy17031 172 YSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTYS 251 (419)
Q Consensus 172 ~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~ 251 (419)
..++..|++..++..++..+
T Consensus 106 ------------------------------------------------------------~~~~~~C~~~~~~~~~~~~~ 125 (481)
T 3pbl_A 106 ------------------------------------------------------------NFSRICCDVFVTLDVMMCTA 125 (481)
T ss_dssp ------------------------------------------------------------CSCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------ccCcchhhhHHHHHHHHHHH
Confidence 55667788888888888899
Q ss_pred HHHHHHHHHHhhheeeeccccc---cc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEeecCCCceeeccccchhHHHH
Q psy17031 252 STYVLVALSIDRYYAIKYPMNF---CG--SWRRARWLVGIAWLISFILSIPIAVLFHVRLVQGTSQCWIEFEKPWQWQLY 326 (419)
Q Consensus 252 s~~~l~~i~~~Ry~~i~~p~~~---~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 326 (419)
+.+.+++|++|||.+|++|++| .. +++++..+++++|++++++++|+.+.+.. ..+...|...+ ..+
T Consensus 126 s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~--~~~~~~C~~~~------~~~ 197 (481)
T 3pbl_A 126 SIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNT--TGDPTVCSISN------PDF 197 (481)
T ss_dssp HHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCC--CSSTTCCSCCC------HHH
T ss_pred HHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecc--cCCCCcccccC------ccH
Confidence 9999999999999999999988 22 77889999999999999999998876654 34455675432 235
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy17031 327 MSLVALALFVIPAVIISICYILIITTIWAK 356 (419)
Q Consensus 327 ~~~~~~~~~~vp~~ii~~~y~~i~~~l~~~ 356 (419)
.....++.+++|+++++++|.+|++++|++
T Consensus 198 ~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~ 227 (481)
T 3pbl_A 198 VIYSSVVSFYLPFGVTVLVYARIYVVLKQR 227 (481)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566677889999999999999999999864
No 13
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.97 E-value=7.9e-33 Score=278.55 Aligned_cols=190 Identities=23% Similarity=0.380 Sum_probs=154.4
Q ss_pred cchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceeeeee
Q psy17031 93 LNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRY 172 (419)
Q Consensus 93 ~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 172 (419)
......+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++..|..+.....+.|
T Consensus 7 ~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~------------ 74 (452)
T 3rze_A 7 QLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKW------------ 74 (452)
T ss_dssp --CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc------------
Confidence 34456678889999999999999999999899999999999999999999999999998887766666
Q ss_pred eceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHHHH
Q psy17031 173 SQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTYSS 252 (419)
Q Consensus 173 ~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~s 252 (419)
..++..|++..++...+..++
T Consensus 75 -----------------------------------------------------------~~~~~~C~~~~~~~~~~~~~s 95 (452)
T 3rze_A 75 -----------------------------------------------------------SLGRPLCLFWLSMDYVASTAS 95 (452)
T ss_dssp -----------------------------------------------------------SSHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------cCCchhHhHHHHHHHHHHHHH
Confidence 445566777777888888899
Q ss_pred HHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEee---cCCCceeeccccchhHHHHH
Q psy17031 253 TYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVRLV---QGTSQCWIEFEKPWQWQLYM 327 (419)
Q Consensus 253 ~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~---~~~~~C~~~~~~~~~~~~~~ 327 (419)
.+.++++++|||.+|++|++|+. +++++...++++|+++++.++|.+........ .....|..++... ..+.
T Consensus 96 ~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~---~~~~ 172 (452)
T 3rze_A 96 IFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDFYDV---TWFK 172 (452)
T ss_dssp HHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSCCSCTTC---HHHH
T ss_pred HHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeecCCCccc---HHHH
Confidence 99999999999999999999877 88999999999999999999886544332222 2445676555443 3466
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy17031 328 SLVALALFVIPAVIISICYILIITTIWAK 356 (419)
Q Consensus 328 ~~~~~~~~~vp~~ii~~~y~~i~~~l~~~ 356 (419)
....++.+++|+++++++|.+|++++|++
T Consensus 173 ~~~~~~~~~~p~~ii~~~y~~I~~~l~~~ 201 (452)
T 3rze_A 173 VMTAIINFYLPTLLMLWFYAKIYKAVRQH 201 (452)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66778889999999999999999999865
No 14
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.97 E-value=9.1e-33 Score=280.59 Aligned_cols=194 Identities=23% Similarity=0.367 Sum_probs=155.9
Q ss_pred ccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceee
Q psy17031 90 LTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKV 169 (419)
Q Consensus 90 ~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 169 (419)
.........+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++.+|..+.... .
T Consensus 17 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~---------- 84 (488)
T 3eml_A 17 PIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--G---------- 84 (488)
T ss_dssp -CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--C----------
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--c----------
Confidence 3445567788888999999999999999999999999999999999999999999999997775432 2
Q ss_pred eeeeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHH
Q psy17031 170 VRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVT 249 (419)
Q Consensus 170 ~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~ 249 (419)
|..+...|++..++...+.
T Consensus 85 -------------------------------------------------------------~~~~~~~C~~~~~~~~~~~ 103 (488)
T 3eml_A 85 -------------------------------------------------------------FCAACHGCLFIACFVLVLT 103 (488)
T ss_dssp -------------------------------------------------------------CEECHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------ccccchHHHHHHHHHHHHH
Confidence 3445677888888899999
Q ss_pred HHHHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEeec-----CCCceeeccc----
Q psy17031 250 YSSTYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVRLVQ-----GTSQCWIEFE---- 318 (419)
Q Consensus 250 ~~s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~-----~~~~C~~~~~---- 318 (419)
.++.+.+++|++|||.+|++|++|+. +++++..+++++|++++++++|+++.+...... +...|...+.
T Consensus 104 ~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 183 (488)
T 3eml_A 104 QSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLF 183 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCSSCTTCEECCH
T ss_pred HHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccceeec
Confidence 99999999999999999999999876 889999999999999999999988865543221 2244544331
Q ss_pred -cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy17031 319 -KPWQWQLYMSLVALALFVIPAVIISICYILIITTIWAK 356 (419)
Q Consensus 319 -~~~~~~~~~~~~~~~~~~vp~~ii~~~y~~i~~~l~~~ 356 (419)
+......+.....++.+++|+++++++|.+|++++||+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~ 222 (488)
T 3eml_A 184 EDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQ 222 (488)
T ss_dssp HHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCC
T ss_pred cccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223445555677889999999999999999999865
No 15
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.97 E-value=5.7e-33 Score=265.52 Aligned_cols=253 Identities=24% Similarity=0.362 Sum_probs=201.9
Q ss_pred ccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceeeee
Q psy17031 92 KLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKVVR 171 (419)
Q Consensus 92 ~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 171 (419)
........++.+++++|++||.++++++.+++++|+++|+++.|||++|++.++...|..+.....++|
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~----------- 77 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTW----------- 77 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCe-----------
Confidence 345567788889999999999999999999999999999999999999999999889988776655555
Q ss_pred eeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHHH
Q psy17031 172 YSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTYS 251 (419)
Q Consensus 172 ~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~ 251 (419)
..++..|+...+....+..+
T Consensus 78 ------------------------------------------------------------~~~~~~C~~~~~~~~~~~~~ 97 (315)
T 4amj_A 78 ------------------------------------------------------------LWGSFLCELWTSLDVLCVTA 97 (315)
T ss_dssp ------------------------------------------------------------CSCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------eccccHHHHHHHHHHHHHHH
Confidence 45556777777788888889
Q ss_pred HHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEe-ecCCCceeeccc--cchhHHHH
Q psy17031 252 STYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVRL-VQGTSQCWIEFE--KPWQWQLY 326 (419)
Q Consensus 252 s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~-~~~~~~C~~~~~--~~~~~~~~ 326 (419)
+.+.++++++|||.+|++|++++. +++++...++++|+.+++.+.|+........ .++...|..+.. +......+
T Consensus 98 S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 177 (315)
T 4amj_A 98 SIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAY 177 (315)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccccccchhhcchHH
Confidence 999999999999999999999876 8899999999999999999988777543322 222334433322 22234556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc----------------------------eEEEEEechhHHHHHHHHHh
Q psy17031 327 MSLVALALFVIPAVIISICYILIITTIWAKSK----------------------------LYTFVLCWSPYIVFDLLQVY 378 (419)
Q Consensus 327 ~~~~~~~~~~vp~~ii~~~y~~i~~~l~~~~~----------------------------~~~f~~cw~P~~v~~~~~~~ 378 (419)
.....++.+++|++++.++|.+|++++|++++ +++|++||+|+.+..++...
T Consensus 178 ~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~ 257 (315)
T 4amj_A 178 AIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVF 257 (315)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66677778899999999999999999987532 57799999999999998877
Q ss_pred cCcCCCchhhHHHHHHHHHhccccccchhhhhcccCCccCC
Q psy17031 379 GYIPRTQNYIAVATLIQSLAPLNSAANPIIYCIFRTGNNNR 419 (419)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~l~~~~s~~nP~iY~~~~~~fR~~ 419 (419)
+.... ......+..+++++||++||++|+ ++++|||+
T Consensus 258 ~~~~~---~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~ 294 (315)
T 4amj_A 258 NRDLV---PDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKA 294 (315)
T ss_dssp CTTSS---CHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHH
T ss_pred cCccc---hHHHHHHHHHHHHHhccccHHHHc-CcHHHHHH
Confidence 64322 223556777889999999999999 89999974
No 16
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.97 E-value=1.6e-31 Score=269.70 Aligned_cols=254 Identities=23% Similarity=0.338 Sum_probs=203.0
Q ss_pred cchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHh-hHHHHHHhhcccccccccceeeee
Q psy17031 93 LNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLS-VLTDIVWRSSVTWKAGNTACKVVR 171 (419)
Q Consensus 93 ~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~-~p~~~~~~~~~~~~~~~~~C~~~~ 171 (419)
......+++.+++++|++||+++++++.+++++|++.|++++|||++|++.+++. .|..+.....+.|
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~----------- 101 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKW----------- 101 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSC-----------
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCc-----------
Confidence 3445667778999999999999999999888899999999999999999998874 7766665544445
Q ss_pred eeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHHH
Q psy17031 172 YSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTYS 251 (419)
Q Consensus 172 ~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~ 251 (419)
..++..|++..++...+..+
T Consensus 102 ------------------------------------------------------------~~~~~~C~~~~~~~~~~~~~ 121 (448)
T 2z73_A 102 ------------------------------------------------------------IFGFAACKVYGFIGGIFGFM 121 (448)
T ss_dssp ------------------------------------------------------------CSHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------cCCHHHHHHHHHHHHHHHHH
Confidence 44556777778888888899
Q ss_pred HHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEeec-CCCceeeccccc-hhHHHHH
Q psy17031 252 STYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVRLVQ-GTSQCWIEFEKP-WQWQLYM 327 (419)
Q Consensus 252 s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~-~~~~C~~~~~~~-~~~~~~~ 327 (419)
+.+.++++++|||.+|++|++++. +++++...++++|+.+++++++..+.++....+ ....|..++... .....+.
T Consensus 122 S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 201 (448)
T 2z73_A 122 SIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNI 201 (448)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEECCSCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecccccCCcchhHHH
Confidence 999999999999999999999866 889999999999999999999888766554443 345677665433 2344555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------------------c--------eEEEEEechhHHHHH
Q psy17031 328 SLVALALFVIPAVIISICYILIITTIWAKS--------------------------K--------LYTFVLCWSPYIVFD 373 (419)
Q Consensus 328 ~~~~~~~~~vp~~ii~~~y~~i~~~l~~~~--------------------------~--------~~~f~~cw~P~~v~~ 373 (419)
....++.+++|+++++++|.+|.+++||++ | +++|++||+|+.+..
T Consensus 202 ~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~ 281 (448)
T 2z73_A 202 LCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVA 281 (448)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 666777799999999999999998887521 1 678999999999999
Q ss_pred HHHHhcCcCCCchhhHHHHHHHHHhccccccchhhhhcccCCccCC
Q psy17031 374 LLQVYGYIPRTQNYIAVATLIQSLAPLNSAANPIIYCIFRTGNNNR 419 (419)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~nP~iY~~~~~~fR~~ 419 (419)
++........ .......+..+++++|+++||+||++++++|||+
T Consensus 282 ~~~~~~~~~~--~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~ 325 (448)
T 2z73_A 282 LLAQFGPLEW--VTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREA 325 (448)
T ss_dssp HHHHHSCGGG--CCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHH
T ss_pred HHHHhCCccc--CChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHH
Confidence 8877653221 1223456677888999999999999999999973
No 17
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.97 E-value=2.2e-32 Score=274.86 Aligned_cols=255 Identities=23% Similarity=0.362 Sum_probs=200.1
Q ss_pred cccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceeee
Q psy17031 91 TKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKVV 170 (419)
Q Consensus 91 ~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 170 (419)
........+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++.+|..+.... .|
T Consensus 28 ~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~--~~---------- 95 (447)
T 4eiy_A 28 IMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GF---------- 95 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHT--TC----------
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cc----------
Confidence 344556778888999999999999999999999999999999999999999999999997765332 22
Q ss_pred eeeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHHH
Q psy17031 171 RYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVTY 250 (419)
Q Consensus 171 ~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~ 250 (419)
..+...|++..++...+..
T Consensus 96 -------------------------------------------------------------~~~~~~C~~~~~~~~~~~~ 114 (447)
T 4eiy_A 96 -------------------------------------------------------------CAACHGCLFIACFVLVLTQ 114 (447)
T ss_dssp -------------------------------------------------------------EEEHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------ccCccHHHHHHHHHHHHHH
Confidence 3355678888888888889
Q ss_pred HHHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhheeEeec-----CCCceeecc-----c
Q psy17031 251 SSTYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLFHVRLVQ-----GTSQCWIEF-----E 318 (419)
Q Consensus 251 ~s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~-----~~~~C~~~~-----~ 318 (419)
++.+.++++++|||.+|++|++|+. +++++...++++|+.++++++|+.+.+...... ....|...+ .
T Consensus 115 ~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 194 (447)
T 4eiy_A 115 SSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFE 194 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTCCTTEEECCHH
T ss_pred HHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccccccccccccchhhccc
Confidence 9999999999999999999998876 889999999999999999999988765532221 123343322 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q psy17031 319 KPWQWQLYMSLVALALFVIPAVIISICYILIITTIWAKS----------------------------------------- 357 (419)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~vp~~ii~~~y~~i~~~l~~~~----------------------------------------- 357 (419)
+......+.....++.+++|+++++++|.+|++++||+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (447)
T 4eiy_A 195 DVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQ 274 (447)
T ss_dssp HHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhccchhhhccCCCCC
Confidence 111223333334556789999999999999999988740
Q ss_pred ----------------------------------------------------------------------------c---
Q psy17031 358 ----------------------------------------------------------------------------K--- 358 (419)
Q Consensus 358 ----------------------------------------------------------------------------~--- 358 (419)
|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k 354 (447)
T 4eiy_A 275 KATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARSTLQKEVHAAK 354 (447)
T ss_dssp C---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccchhHHHHHHHHHHH
Confidence 0
Q ss_pred -----eEEEEEechhHHHHHHHHHhcCcCCCchhhHHHHHHHHHhccccccchhhhhcccCCccCC
Q psy17031 359 -----LYTFVLCWSPYIVFDLLQVYGYIPRTQNYIAVATLIQSLAPLNSAANPIIYCIFRTGNNNR 419 (419)
Q Consensus 359 -----~~~f~~cw~P~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~nP~iY~~~~~~fR~~ 419 (419)
+++|++||+|+.+..++........ .....+..+..+++++|+++||+||++++++|||+
T Consensus 355 ~l~~vv~~F~icw~P~~i~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~ 419 (447)
T 4eiy_A 355 SLAIIVGLFALCWLPLHIINCFTFFCPDCS-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQT 419 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHhhhhhheeccHHHHHHHHHHhcCccc-ccchHHHHHHHHHHHHHhccchhhhHhccHHHHHH
Confidence 6889999999999998877764322 23344677888999999999999999999999974
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.96 E-value=1.9e-31 Score=274.39 Aligned_cols=255 Identities=24% Similarity=0.368 Sum_probs=200.5
Q ss_pred ccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccccccceee
Q psy17031 90 LTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAGNTACKV 169 (419)
Q Consensus 90 ~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 169 (419)
.........+++.+++++|++||+++++++.+++++|++.|+++.|||++|++.+++..|..+.....+.|
T Consensus 178 ~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~--------- 248 (514)
T 3sn6_R 178 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTW--------- 248 (514)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSC---------
T ss_pred CchHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCe---------
Confidence 33445566788889999999999999999999999999999999999999999999999988877655555
Q ss_pred eeeeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeecceeccccccccchhhhHHHHHH
Q psy17031 170 VRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRSSVTWKAGNTACKVVRYSQAVVT 249 (419)
Q Consensus 170 ~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~C~~~~~~~~~~~ 249 (419)
..++..|++..++...+.
T Consensus 249 --------------------------------------------------------------~~~~~~C~~~~~l~~~~~ 266 (514)
T 3sn6_R 249 --------------------------------------------------------------TFGNFWCEFWTSIDVLCV 266 (514)
T ss_dssp --------------------------------------------------------------CSCSHHHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------eCCcchhhhHHHHHHHHH
Confidence 455567777788888888
Q ss_pred HHHHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHh-heeEeecCCCceeecc--ccchhHH
Q psy17031 250 YSSTYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVL-FHVRLVQGTSQCWIEF--EKPWQWQ 324 (419)
Q Consensus 250 ~~s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~-~~~~~~~~~~~C~~~~--~~~~~~~ 324 (419)
.++.++++++++|||.+|++|++|+. +++++...++++|++++++++++... +......+...|.... .+.....
T Consensus 267 ~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 346 (514)
T 3sn6_R 267 TASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQ 346 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCCCCCCCH
T ss_pred HHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeeccccccccccc
Confidence 99999999999999999999999876 88999999999999999998766543 3322222223333221 1222345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------------------------------------c-------
Q psy17031 325 LYMSLVALALFVIPAVIISICYILIITTIWAKS---------------------------------------K------- 358 (419)
Q Consensus 325 ~~~~~~~~~~~~vp~~ii~~~y~~i~~~l~~~~---------------------------------------~------- 358 (419)
.+.....++.+++|+++++++|.+|++++|++. +
T Consensus 347 ~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~ 426 (514)
T 3sn6_R 347 AYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKALKTLGI 426 (514)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHHHHHHHHHHHH
Confidence 677777888899999999999999999887530 1
Q ss_pred -eEEEEEechhHHHHHHHHHhcCcCCCchhhHHHHHHHHHhccccccchhhhhcccCCccCC
Q psy17031 359 -LYTFVLCWSPYIVFDLLQVYGYIPRTQNYIAVATLIQSLAPLNSAANPIIYCIFRTGNNNR 419 (419)
Q Consensus 359 -~~~f~~cw~P~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~nP~iY~~~~~~fR~~ 419 (419)
+++|++||+|+.+..++....... .......+..+++++||++||+||+ ++++||++
T Consensus 427 iv~~F~lcwlP~~i~~~~~~~~~~~---~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~ 484 (514)
T 3sn6_R 427 IMGTFTLCWLPFFIVNIVHVIQDNL---IRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIA 484 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTS---SCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccc---cchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHH
Confidence 577999999999999887765322 2234566778899999999999999 89999973
No 19
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.64 E-value=4.9e-18 Score=161.30 Aligned_cols=203 Identities=19% Similarity=0.189 Sum_probs=126.1
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.++|.+++++|++||++|++++.++|++|+++|+++.|||++|..... ..|+
T Consensus 15 ~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~--------------------------- 66 (296)
T 2lnl_A 15 IIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPI--------------------------- 66 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHH---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhH---------------------------
Confidence 356789999999999999999999999999999999999999732211 0110
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
...... .. + . +|
T Consensus 67 ---------------------~~~~~~---------~~--------------------------------~-~-----~~ 78 (296)
T 2lnl_A 67 ---------------------WAASKV---------NG--------------------------------W-I-----FG 78 (296)
T ss_dssp ---------------------HHHHHH---------SS--------------------------------S-C-----CS
T ss_pred ---------------------HHhhcc---------CC--------------------------------C-c-----cc
Confidence 000000 00 0 0 24
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeeeeeec------ceeccccccc
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDIVWRS------SVTWKAGNTA 237 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~w~~~~~~ 237 (419)
+..|+...++...+..+|++++++||+|||.||++|++|..+.+++...++.+.|..+...... ..+...+...
T Consensus 79 ~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~ 158 (296)
T 2lnl_A 79 TFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPV 158 (296)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCC
T ss_pred hhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhhhhhhHheehHHHHHHHHHhcchhhcceeecCCCCCce
Confidence 6788888888899999999999999999999999999997776666666777778765433211 1111111111
Q ss_pred cc---------hhhhHHHHHHHHHHHHHHHHHHhhheeeeccccccc--cchhhhHHHHHHHHHHHHHHHHHHHhh
Q psy17031 238 CK---------VVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCG--SWRRARWLVGIAWLISFILSIPIAVLF 302 (419)
Q Consensus 238 C~---------~~~~~~~~~~~~s~~~l~~i~~~Ry~~i~~p~~~~~--t~~~~~~~i~~~W~~s~~~~~p~~~~~ 302 (419)
|. ...................+....|..+.+-.+.+. +++|+...+..+-...++.++|.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~~~~~~k~~~~~~~v~~~f~icw~P~~i~~ 234 (296)
T 2lnl_A 159 CYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVL 234 (296)
T ss_dssp CCSCCSCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCCCHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhheeeeehHHHHHH
Confidence 10 001111111222222333333334544544443333 556666666777777777788876643
No 20
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.50 E-value=1.4e-15 Score=156.06 Aligned_cols=128 Identities=21% Similarity=0.326 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHhccceEEEEEEecee---ecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccc
Q psy17031 5 VILWALFILIVLGNSAVIFTLKFGVK---RRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAM 81 (419)
Q Consensus 5 ~~~~~~~~~~~~gN~~v~~~~~~~~~---~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (419)
++|.+++++|++||++|++++.++|+ +|+++|+|+.|||++|+......+|.
T Consensus 37 ~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~------------------------- 91 (510)
T 4grv_A 37 AIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPV------------------------- 91 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------
T ss_pred HHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHH-------------------------
Confidence 56889999999999999999988765 45889999999999972221111110
Q ss_pred cccCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccc
Q psy17031 82 LTWSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWK 161 (419)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~ 161 (419)
.+. +.+ ..... |.
T Consensus 92 --------------------------~~~-~~~----~~~~~------------------------------------w~ 104 (510)
T 4grv_A 92 --------------------------ELY-NFI----WVHHP------------------------------------WA 104 (510)
T ss_dssp --------------------------HHH-HTT----TCCSS------------------------------------CS
T ss_pred --------------------------HHH-HHH----HhCCC------------------------------------EE
Confidence 000 000 00001 67
Q ss_pred ccccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCcccc-cccchhcccccceeeeeeeee
Q psy17031 162 AGNTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFC-GSCKYIRDLCVGVLSVLTDIV 224 (419)
Q Consensus 162 ~~~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~-~~~~~~~~~~~~~~~~~~~~~ 224 (419)
+|+.+|++..++...+..+|+++|++||+|||+||++|++|. ..++++...+++++|+.+.+.
T Consensus 105 ~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~ 168 (510)
T 4grv_A 105 FGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALL 168 (510)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHH
Confidence 888999999999999999999999999999999999999994 456677778888888776443
No 21
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.48 E-value=6.8e-15 Score=147.39 Aligned_cols=128 Identities=22% Similarity=0.193 Sum_probs=95.0
Q ss_pred hhhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCcccccc
Q psy17031 3 QFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAML 82 (419)
Q Consensus 3 ~~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (419)
..+++.+++++|++||+++++++.+++++|+++|+++.|||++|+.......|.
T Consensus 11 ~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~-------------------------- 64 (452)
T 3rze_A 11 LVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPM-------------------------- 64 (452)
T ss_dssp GGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHH--------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 457789999999999999999999999999999999999999983333222221
Q ss_pred ccCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccc
Q psy17031 83 TWSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKA 162 (419)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~ 162 (419)
.+..... ... + . .
T Consensus 65 ----------------------~~~~~~~---------~~~-------------------------~------~--~--- 77 (452)
T 3rze_A 65 ----------------------NILYLLM---------SKW-------------------------S------L--G--- 77 (452)
T ss_dssp ----------------------HHHHHHS---------SSC-------------------------S------S--H---
T ss_pred ----------------------HHHHHHc---------CCc-------------------------c------C--C---
Confidence 0000000 000 0 0 0
Q ss_pred cccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCccc-ccccchhcccccceeeeeeeee
Q psy17031 163 GNTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNF-CGSCKYIRDLCVGVLSVLTDIV 224 (419)
Q Consensus 163 ~~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~-~~~~~~~~~~~~~~~~~~~~~~ 224 (419)
+..|++..++...+..+|++++++||+|||++|++|++| ....++....+++++|+.+...
T Consensus 78 -~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~ 139 (452)
T 3rze_A 78 -RPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLW 139 (452)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGG
T ss_pred -chhHhHHHHHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHH
Confidence 246777788888889999999999999999999999999 4446677777788888776443
No 22
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.46 E-value=3e-15 Score=153.76 Aligned_cols=125 Identities=22% Similarity=0.213 Sum_probs=86.9
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.+++++++++|++||++|++++.++|++|+++|+++.|||++|+.......|
T Consensus 67 ~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p---------------------------- 118 (520)
T 3v2y_A 67 SVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTA---------------------------- 118 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHH----------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHH----------------------------
Confidence 5678999999999999999999999999999999999999998222111111
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
..+.+. .... . . +
T Consensus 119 ------------------------~~~~~~------~~~~--~-----------------------------~------~ 131 (520)
T 3v2y_A 119 ------------------------NLLLSG------ATTY--K-----------------------------L------T 131 (520)
T ss_dssp ------------------------HHHHSG------GGGT--T-----------------------------S------C
T ss_pred ------------------------HHHHcc------ccce--e-----------------------------e------C
Confidence 000010 0000 0 0 1
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCccc-ccccchhcccccceeeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNF-CGSCKYIRDLCVGVLSVLTDIV 224 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~-~~~~~~~~~~~~~~~~~~~~~~ 224 (419)
+..|++..++...+.++|+++|++||+|||+||+ |++| ...++++...+++++|+.+.+.
T Consensus 132 ~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~ 192 (520)
T 3v2y_A 132 PAQWFLREGSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLIL 192 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHH
Confidence 2446666666777888999999999999999999 9999 5556677778888899876543
No 23
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.45 E-value=1.2e-15 Score=155.20 Aligned_cols=125 Identities=25% Similarity=0.271 Sum_probs=92.7
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.+++.+++++|++||++|++++.++|++|+++|+++.|||++|+... ...|.
T Consensus 52 ~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~--------------------------- 103 (502)
T 3odu_A 52 PTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPF--------------------------- 103 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHH---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHH---------------------------
Confidence 46788999999999999999999999999999999999999984331 11110
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
.+....++ .+ .+
T Consensus 104 ---------------------~~~~~~~~-----------------------------------~~-------~~----- 115 (502)
T 3odu_A 104 ---------------------WAVDAVAN-----------------------------------WY-------FG----- 115 (502)
T ss_dssp ---------------------HHHHHHTC-----------------------------------CC-------SH-----
T ss_pred ---------------------HHHHHhcC-----------------------------------Cc-------CC-----
Confidence 00000000 00 00
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCccc-ccccchhcccccceeeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNF-CGSCKYIRDLCVGVLSVLTDIV 224 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~-~~~~~~~~~~~~~~~~~~~~~~ 224 (419)
+..|+++.++...+..+|+++|++||+|||+||++|++| ...+++....+++++|+.+.+.
T Consensus 116 ~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~ 177 (502)
T 3odu_A 116 NFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLL 177 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHT
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHH
Confidence 134777888888889999999999999999999999999 4445566677788888776443
No 24
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.44 E-value=7.3e-15 Score=147.78 Aligned_cols=127 Identities=19% Similarity=0.302 Sum_probs=93.8
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.+++.+++++|++||+++++++.++|++|+++|+++.|||++|+.......|.
T Consensus 27 ~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~--------------------------- 79 (467)
T 3uon_A 27 VLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNL--------------------------- 79 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHH---------------------------
T ss_pred HHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHH---------------------------
Confidence 45678899999999999999999999999999999999999983322222221
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
.+.....+ .. .. .
T Consensus 80 ---------------------~~~~~~~~---------~~-------------------------------~~--~---- 92 (467)
T 3uon_A 80 ---------------------YTLYTVIG---------YW-------------------------------PL--G---- 92 (467)
T ss_dssp ---------------------HHHHHHSS---------SC-------------------------------CS--C----
T ss_pred ---------------------HHHHHhcC---------Cc-------------------------------cC--C----
Confidence 00000000 00 00 0
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCccc-ccccchhcccccceeeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNF-CGSCKYIRDLCVGVLSVLTDIV 224 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~-~~~~~~~~~~~~~~~~~~~~~~ 224 (419)
+..|++..++...+..+|++++++||+|||++|++|++| ...+++....+++++|+.+.+.
T Consensus 93 ~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~ 154 (467)
T 3uon_A 93 PVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFIL 154 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred cchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHH
Confidence 256778888888889999999999999999999999999 4456677777888888776443
No 25
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.44 E-value=7e-15 Score=147.65 Aligned_cols=125 Identities=20% Similarity=0.285 Sum_probs=92.7
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.+++.+++++|++||+++++++.+++++|+++|+++.|||++|+..... .|
T Consensus 21 ~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p---------------------------- 71 (464)
T 4dkl_A 21 MALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LP---------------------------- 71 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HH----------------------------
T ss_pred HHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HH----------------------------
Confidence 4678899999999999999999999999999999999999997221111 11
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
..+.....+ . +.. .
T Consensus 72 --------------------~~~~~~~~~---------~-------------------------------~~~--~---- 85 (464)
T 4dkl_A 72 --------------------FQSVNYLMG---------T-------------------------------WPF--G---- 85 (464)
T ss_dssp --------------------HHHHHHHHS---------S-------------------------------CCS--C----
T ss_pred --------------------HHHHHHHhC---------C-------------------------------ccc--c----
Confidence 000000000 0 000 1
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCccc-ccccchhcccccceeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNF-CGSCKYIRDLCVGVLSVLTDI 223 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~-~~~~~~~~~~~~~~~~~~~~~ 223 (419)
+..|++..++...+..+|++++++||+|||+||++|++| ....++....+++++|+.+..
T Consensus 86 ~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~ 146 (464)
T 4dkl_A 86 NILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSA 146 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHH
Confidence 256888888888899999999999999999999999999 444667777778888876643
No 26
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.44 E-value=6e-15 Score=149.10 Aligned_cols=126 Identities=25% Similarity=0.311 Sum_probs=94.8
Q ss_pred hhhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCcccccc
Q psy17031 3 QFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAML 82 (419)
Q Consensus 3 ~~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (419)
..+++.+++++|++||+++++++.+++++|+++|+++.|||++|+.......|.
T Consensus 24 ~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~-------------------------- 77 (488)
T 3eml_A 24 YITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPF-------------------------- 77 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHH--------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 346788999999999999999999999999999999999999983332222221
Q ss_pred ccCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccc
Q psy17031 83 TWSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKA 162 (419)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~ 162 (419)
.+ . +.. . . ..
T Consensus 78 ----------------------~~---~-~~~------~-~-------------------------------~~------ 87 (488)
T 3eml_A 78 ----------------------AI---T-IST------G-F-------------------------------CA------ 87 (488)
T ss_dssp ----------------------HH---H-HTT------C-C-------------------------------EE------
T ss_pred ----------------------HH---H-Hhc------c-c-------------------------------cc------
Confidence 00 0 000 0 0 00
Q ss_pred cccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCccc-ccccchhcccccceeeeeeeee
Q psy17031 163 GNTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNF-CGSCKYIRDLCVGVLSVLTDIV 224 (419)
Q Consensus 163 ~~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~-~~~~~~~~~~~~~~~~~~~~~~ 224 (419)
|+..|++..++...+..+|++++++||+|||++|++|++| ....++....+++++|+.+.+.
T Consensus 88 ~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~ 150 (488)
T 3eml_A 88 ACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAI 150 (488)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHH
Confidence 1246888888888889999999999999999999999999 4456677777788888776443
No 27
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.44 E-value=4.1e-15 Score=150.47 Aligned_cols=127 Identities=18% Similarity=0.210 Sum_probs=91.4
Q ss_pred hhhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCcccccc
Q psy17031 3 QFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAML 82 (419)
Q Consensus 3 ~~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (419)
..+++.+++++|++||+++++++.+++++|+++|+++.|||++|+.... ..|+.
T Consensus 23 ~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~-~~~~~------------------------- 76 (484)
T 3vw7_A 23 VPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVS-VLPFK------------------------- 76 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHT-THHHH-------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHH-HHHHH-------------------------
Confidence 3567889999999999999999999999999999999999999844321 12210
Q ss_pred ccCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccc
Q psy17031 83 TWSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKA 162 (419)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~ 162 (419)
...+.. ... +.. .
T Consensus 77 --------------------------~~~~~~------~~~------------------------------~~~--~--- 89 (484)
T 3vw7_A 77 --------------------------ISYYFS------GSD------------------------------WQF--G--- 89 (484)
T ss_dssp --------------------------HHHHHT------TSC------------------------------CCS--C---
T ss_pred --------------------------HHHHHh------cCC------------------------------ccc--c---
Confidence 000000 000 000 0
Q ss_pred cccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCcccc-cccchhcccccceeeeeeee
Q psy17031 163 GNTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFC-GSCKYIRDLCVGVLSVLTDI 223 (419)
Q Consensus 163 ~~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~-~~~~~~~~~~~~~~~~~~~~ 223 (419)
+..|+++.++...+..+|+++|++||+|||.||++|++|. ..+++....+++++|+.+.+
T Consensus 90 -~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~ 150 (484)
T 3vw7_A 90 -SELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIA 150 (484)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHH
T ss_pred -hhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHH
Confidence 2567778888888899999999999999999999999994 45667777788888877644
No 28
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.42 E-value=1.6e-14 Score=146.00 Aligned_cols=128 Identities=27% Similarity=0.368 Sum_probs=92.0
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.+++.+++++|++||+++++++.++|++|+++|+++.|||++|+.......|.
T Consensus 42 ~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~--------------------------- 94 (481)
T 3pbl_A 42 ALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPW--------------------------- 94 (481)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHH---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHH---------------------------
Confidence 46789999999999999999999999999999999999999983332222220
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
.+.....+ .. +.. .
T Consensus 95 ---------------------~~~~~~~~---------~~------------------------------~~~--~---- 108 (481)
T 3pbl_A 95 ---------------------VVYLEVTG---------GV------------------------------WNF--S---- 108 (481)
T ss_dssp ---------------------HHHHHHTT---------SC------------------------------CCS--C----
T ss_pred ---------------------HHHHHHhc---------Cc------------------------------ccc--C----
Confidence 00000000 00 000 0
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCccc----ccccchhcccccceeeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNF----CGSCKYIRDLCVGVLSVLTDIV 224 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~----~~~~~~~~~~~~~~~~~~~~~~ 224 (419)
+..|++..++...+..+|++++++||+|||++|++|++| ....+++...+++++|+.+.+.
T Consensus 109 ~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~ 173 (481)
T 3pbl_A 109 RICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAV 173 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 245777777778888999999999999999999999998 2334566667788888776443
No 29
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.41 E-value=2.6e-14 Score=139.18 Aligned_cols=125 Identities=22% Similarity=0.302 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.+++.+++++|++||+++++++.++|++|+++|+++.|||++|........|.
T Consensus 36 ~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~--------------------------- 88 (364)
T 2ks9_A 36 AAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVV--------------------------- 88 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHH---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHH---------------------------
Confidence 45678899999999999999999999999999999999999973222211110
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
....... . . +.. .
T Consensus 89 ---------------------~~~~~~~---------~-~------------------------------~~~--~---- 101 (364)
T 2ks9_A 89 ---------------------NFTYAVH---------N-E------------------------------WYY--G---- 101 (364)
T ss_dssp ---------------------HHHHHHH---------T-S------------------------------CSS--C----
T ss_pred ---------------------HHHHHHc---------C-C------------------------------ccc--h----
Confidence 0000000 0 0 000 0
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDI 223 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~ 223 (419)
+..|+++.++...+..+|++++++||+|||.||++|++|+ ..+++...++++.|..+..
T Consensus 102 ~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~-~~~~~~~~~i~~~W~~s~~ 160 (364)
T 2ks9_A 102 LFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR-LSATATKVVICVIWVLALL 160 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS-CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-cccchHHHHHHHHHHHHHH
Confidence 1457777778888889999999999999999999999986 3445555666777876543
No 30
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.41 E-value=1.5e-14 Score=145.07 Aligned_cols=125 Identities=25% Similarity=0.220 Sum_probs=87.0
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.+++.+++++|++||+++++++.++|++|+++|+++.|||++|+.. ....|.
T Consensus 129 ~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~--------------------------- 180 (434)
T 4ea3_A 129 VGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPF--------------------------- 180 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHH---------------------------
T ss_pred HHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHH---------------------------
Confidence 4578889999999999999999999999999999999999997332 111110
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
....... .. .+ . .
T Consensus 181 ---------------------~~~~~~~---------~~-------------------------~~------~--~---- 193 (434)
T 4ea3_A 181 ---------------------QGTDILL---------GF-------------------------WP------F--G---- 193 (434)
T ss_dssp ---------------------HHHHHHH---------TS-------------------------CT------T--H----
T ss_pred ---------------------HHHHHHh---------cC-------------------------Cc------C--c----
Confidence 0000000 00 00 0 0
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCcccc-cccchhcccccceeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFC-GSCKYIRDLCVGVLSVLTDI 223 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~-~~~~~~~~~~~~~~~~~~~~ 223 (419)
+..|+++.++...+..+|++++++||+|||.+|++|++|. ..++++...++.++|..+..
T Consensus 194 ~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~ 254 (434)
T 4ea3_A 194 NALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASV 254 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHH
Confidence 2457777788888889999999999999999999999994 44566666777788876543
No 31
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.39 E-value=7.7e-15 Score=149.93 Aligned_cols=127 Identities=19% Similarity=0.217 Sum_probs=92.7
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.+++.+++++|++||+++++++.++|++|+++|+++.|||++|+......+|.
T Consensus 44 ~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~--------------------------- 96 (500)
T 2rh1_A 44 GIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPF--------------------------- 96 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHH---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHH---------------------------
Confidence 45688999999999999999999999999999999999999973332222221
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
.+.....+- .+ . ..
T Consensus 97 ---------------------~~~~~~~~~----------------------------------w~------~--~~--- 110 (500)
T 2rh1_A 97 ---------------------GAAHILMKM----------------------------------WT------F--GN--- 110 (500)
T ss_dssp ---------------------HHHHHHHTS----------------------------------CC------S--HH---
T ss_pred ---------------------HHHHHHhCC----------------------------------Cc------C--Cc---
Confidence 000000000 00 0 01
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCccccc-ccchhcccccceeeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCG-SCKYIRDLCVGVLSVLTDIV 224 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~-~~~~~~~~~~~~~~~~~~~~ 224 (419)
..|+++.++...+..+|+++|++||+|||+||++|++|.+ .+++....+++++|+.+.+.
T Consensus 111 -~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~ 171 (500)
T 2rh1_A 111 -FWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLT 171 (500)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHH
T ss_pred -chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHH
Confidence 3467777777788899999999999999999999999954 56677778888889776443
No 32
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.37 E-value=8.6e-15 Score=141.38 Aligned_cols=126 Identities=19% Similarity=0.212 Sum_probs=91.3
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.+++.+++++|++||+++++++.++|++|+++|+++.|||++|........|.
T Consensus 42 ~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~--------------------------- 94 (349)
T 1u19_A 42 AAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTT--------------------------- 94 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHH---------------------------
T ss_pred HHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchH---------------------------
Confidence 35678899999999999999999999999999999999999973222211110
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
.+..... .. +.. +
T Consensus 95 ---------------------~~~~~~~----------~~------------------------------~~~--~---- 107 (349)
T 1u19_A 95 ---------------------TLYTSLH----------GY------------------------------FVF--G---- 107 (349)
T ss_dssp ---------------------HHHHHHH----------TS------------------------------CTT--H----
T ss_pred ---------------------HHHHHhc----------Ce------------------------------eeC--C----
Confidence 0000000 00 000 0
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCcccccccchhcccccceeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCGSCKYIRDLCVGVLSVLTDI 223 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~~~~~~~~~~~~~~~~~~~~ 223 (419)
+..|++..++...+..+|++++++||+|||.||++|++|++.++++...++++.|..+..
T Consensus 108 ~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~i~~~W~~~~~ 167 (349)
T 1u19_A 108 PTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALA 167 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCccceeeccchhHHHHHHHHHHHHH
Confidence 145777777778888999999999999999999999999666666666777778876533
No 33
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.34 E-value=1.2e-14 Score=145.45 Aligned_cols=126 Identities=25% Similarity=0.352 Sum_probs=93.7
Q ss_pred hhhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCcccccc
Q psy17031 3 QFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAML 82 (419)
Q Consensus 3 ~~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (419)
..+++.+++++|++||+++++++.++|++|+++|+++.|||++|+.......|.
T Consensus 34 ~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~-------------------------- 87 (447)
T 4eiy_A 34 YITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPF-------------------------- 87 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHH--------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 356788999999999999999999999999999999999999984333322221
Q ss_pred ccCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhcccccc
Q psy17031 83 TWSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKA 162 (419)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~ 162 (419)
.+. +.. . +.. .
T Consensus 88 ----------------------~~~----~~~-------~-------------------------------~~~--~--- 98 (447)
T 4eiy_A 88 ----------------------AIT----IST-------G-------------------------------FCA--A--- 98 (447)
T ss_dssp ----------------------HHH----HHT-------T-------------------------------CEE--E---
T ss_pred ----------------------HHH----Hhc-------c-------------------------------ccc--C---
Confidence 000 000 0 000 0
Q ss_pred cccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCccc-ccccchhcccccceeeeeeeee
Q psy17031 163 GNTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNF-CGSCKYIRDLCVGVLSVLTDIV 224 (419)
Q Consensus 163 ~~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~-~~~~~~~~~~~~~~~~~~~~~~ 224 (419)
+..|+++.++...+..+|++++++||+|||.+|++|++| ....++....+++++|+.+...
T Consensus 99 -~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~ 160 (447)
T 4eiy_A 99 -CHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAI 160 (447)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHH
Confidence 145777778888888999999999999999999999999 4455667777788888766443
No 34
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.32 E-value=3.8e-14 Score=145.21 Aligned_cols=127 Identities=20% Similarity=0.296 Sum_probs=95.0
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.+++.+++++|++||+++++++.++|++|+++|+++.|||++|+.......|..
T Consensus 186 ~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~-------------------------- 239 (514)
T 3sn6_R 186 GIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFG-------------------------- 239 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHH--------------------------
T ss_pred HHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHH--------------------------
Confidence 356788999999999999999999999999999999999999754443333310
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
+.....+- +.. .
T Consensus 240 ----------------------~~~~~~~~----------------------------------------~~~--~---- 251 (514)
T 3sn6_R 240 ----------------------AAHILTKT----------------------------------------WTF--G---- 251 (514)
T ss_dssp ----------------------HHHHHHTS----------------------------------------CCS--C----
T ss_pred ----------------------HHHHHcCC----------------------------------------eeC--C----
Confidence 00000000 000 0
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCcccc-cccchhcccccceeeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFC-GSCKYIRDLCVGVLSVLTDIV 224 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~-~~~~~~~~~~~~~~~~~~~~~ 224 (419)
+..|++..++...+..+|++++++||+|||++|++|++|. ..+++....+++++|..+.+.
T Consensus 252 ~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~ 313 (514)
T 3sn6_R 252 NFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLT 313 (514)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHH
Confidence 2457777778888889999999999999999999999994 466777778888888776443
No 35
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.31 E-value=1.5e-13 Score=138.02 Aligned_cols=125 Identities=21% Similarity=0.223 Sum_probs=89.8
Q ss_pred hHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCC-CCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 5 VILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARN-YPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 5 ~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
+++.+++++|++||+++++++.++|++|+++|+++.|||++|+...... .|.
T Consensus 39 i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~--------------------------- 91 (448)
T 2z73_A 39 IFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPL--------------------------- 91 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTH---------------------------
T ss_pred HHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccH---------------------------
Confidence 5678889999999999999999999999999999999999983332221 110
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
.+..... ... . . .
T Consensus 92 ---------------------~~~~~~~---------~~~----~---------------------------~--~---- 104 (448)
T 2z73_A 92 ---------------------MTISCFL---------KKW----I---------------------------F--G---- 104 (448)
T ss_dssp ---------------------HHHHHHT---------TSC----C---------------------------S--H----
T ss_pred ---------------------HHHHHhc---------CCc----c---------------------------C--C----
Confidence 0000000 000 0 0 0
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCccc-ccccchhcccccceeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNF-CGSCKYIRDLCVGVLSVLTDI 223 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~-~~~~~~~~~~~~~~~~~~~~~ 223 (419)
+..|++..++...+..+|++++++||+|||++|++|++| ...++++...+++++|+.+.+
T Consensus 105 ~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~ 165 (448)
T 2z73_A 105 FAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVL 165 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHH
Confidence 134666667777788899999999999999999999999 445566777778888876543
No 36
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.25 E-value=6.5e-14 Score=132.89 Aligned_cols=126 Identities=21% Similarity=0.300 Sum_probs=94.7
Q ss_pred hhHHHHHHHHHHhccceEEEEEEeceeecccceehhhHHHHHhhhhcCCCCCCCCccccccCCCCCCCCCCCCccccccc
Q psy17031 4 FVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVAVTRVSARNYPPTHASASLSGASASLSGAGKSQQDAMLT 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~gN~~v~~~~~~~~~~~~~~~~~i~nLa~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (419)
.+++.+++++|++||+++++++.++|++|+++|+++.|||++|........|..
T Consensus 15 ~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~-------------------------- 68 (315)
T 4amj_A 15 SLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFG-------------------------- 68 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHH--------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHH--------------------------
Confidence 467889999999999999999999999999999999999999765554444410
Q ss_pred cCccccccccchHHHHHHHHHHHHHHhhhheeeEEeEecccccchhhHHHHHHHHHHHHHHHHhhHHHHHHhhccccccc
Q psy17031 84 WSPIRTLTKLNTEQFVILWALFILIVLGNSAVIFTLKFGVKRRSRMNFFIMHLAVADLCVGVLSVLTDIVWRSSVTWKAG 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~~vgl~gN~lvl~~i~~~~~~~~~~~~~i~~La~aDll~~~~~~p~~~~~~~~~~~~~~ 163 (419)
......+ . +.. +
T Consensus 69 ----------------------~~~~~~~----------~------------------------------~~~--~---- 80 (315)
T 4amj_A 69 ----------------------ATLVVRG----------T------------------------------WLW--G---- 80 (315)
T ss_dssp ----------------------HHHHHHS----------S------------------------------CCS--C----
T ss_pred ----------------------HHHHhcC----------C------------------------------eec--c----
Confidence 0000000 0 000 0
Q ss_pred ccceeeeeeeceeehhhhhhHHHHHhhhhhhhhccCccccc-ccchhcccccceeeeeeee
Q psy17031 164 NTACKVVRYSQAVVTYSSTYVLVALSIDRYYAIKYPMNFCG-SCKYIRDLCVGVLSVLTDI 223 (419)
Q Consensus 164 ~~~C~~~~~~~~~~~~~s~~~L~~is~dRy~aI~~p~~~~~-~~~~~~~~~~~~~~~~~~~ 223 (419)
+..|++..++...+..+|++++++||+|||.||++|++|++ .++++...++++.|..+..
T Consensus 81 ~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~ 141 (315)
T 4amj_A 81 SFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISAL 141 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHH
Confidence 24677777888888899999999999999999999999944 5667777778888876543
No 37
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.14 E-value=4.4e-07 Score=55.46 Aligned_cols=25 Identities=36% Similarity=0.565 Sum_probs=23.0
Q ss_pred hhhhHHHHHhhhhhhhhccCccccc
Q psy17031 180 SSTYVLVALSIDRYYAIKYPMNFCG 204 (419)
Q Consensus 180 ~s~~~L~~is~dRy~aI~~p~~~~~ 204 (419)
+|+++|++||+|||.||++|++|..
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~ 26 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNL 26 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGS
T ss_pred cHHHHHHHHHHHHHHHhhhhhhccc
Confidence 6899999999999999999999843
No 38
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=97.72 E-value=2.6e-06 Score=54.84 Aligned_cols=29 Identities=31% Similarity=0.419 Sum_probs=25.2
Q ss_pred HHHHHHHhccccccchhhhhcccCCccCC
Q psy17031 391 ATLIQSLAPLNSAANPIIYCIFRTGNNNR 419 (419)
Q Consensus 391 ~~~~~~l~~~~s~~nP~iY~~~~~~fR~~ 419 (419)
..+..+++++||++||+||++++++||++
T Consensus 3 ~~~~~~l~~~ns~lNPiIY~~~~~~fr~~ 31 (40)
T 2koe_A 3 FAFASMLCLLNSTVNPIIYALRSKDLRHA 31 (40)
T ss_dssp HHHHHHHHHHHHHSSTTTTBTTBHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 45667888999999999999999999863
No 39
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=97.53 E-value=1.5e-05 Score=48.40 Aligned_cols=25 Identities=36% Similarity=0.565 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhhheeeeccccccc
Q psy17031 251 SSTYVLVALSIDRYYAIKYPMNFCG 275 (419)
Q Consensus 251 ~s~~~l~~i~~~Ry~~i~~p~~~~~ 275 (419)
+|.+.++++++|||.+|++|++++.
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~ 26 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNL 26 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGS
T ss_pred cHHHHHHHHHHHHHHHhhhhhhccc
Confidence 6789999999999999999999876
No 40
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=92.66 E-value=0.0018 Score=45.67 Aligned_cols=27 Identities=26% Similarity=0.317 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHhccceEEEEEEeceee
Q psy17031 5 VILWALFILIVLGNSAVIFTLKFGVKR 31 (419)
Q Consensus 5 ~~~~~~~~~~~~gN~~v~~~~~~~~~~ 31 (419)
++|.++|++|++||++|++++.++|--
T Consensus 33 ~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 33 AIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp HHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 678999999999999999998776643
No 41
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=90.25 E-value=0.016 Score=40.83 Aligned_cols=28 Identities=25% Similarity=0.211 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHhhhheeeEEeEecc
Q psy17031 96 EQFVILWALFILIVLGNSAVIFTLKFGV 123 (419)
Q Consensus 96 ~~~~~~~~i~~vgl~gN~lvl~~i~~~~ 123 (419)
...+++.+++++|++||.++++++.++|
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~ 57 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKK 57 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEec
Confidence 6778899999999999999998877765
No 42
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=83.22 E-value=0.066 Score=32.19 Aligned_cols=17 Identities=18% Similarity=0.643 Sum_probs=13.5
Q ss_pred EEEEEechhHHHHHHHH
Q psy17031 360 YTFVLCWSPYIVFDLLQ 376 (419)
Q Consensus 360 ~~f~~cw~P~~v~~~~~ 376 (419)
..|.+||+||++..++.
T Consensus 13 ~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 13 AVLLICWFPVLALMAHS 29 (33)
T ss_dssp HHHTTTSSHHHHHHTTT
T ss_pred HHHHHHHhHHHHHHHHH
Confidence 45899999999876553
Done!