BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17032
(283 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1CB0|A Chain A, Structure Of Human 5'-deoxy-5'-methylthioadenosine
Phosphorylase At 1.7 A Resolution
pdb|1CG6|A Chain A, Structure Of Human 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate At 1.7 A
Resolution
pdb|1K27|A Chain A, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase In Complex With A Transition State
Analogue
pdb|1SD1|A Chain A, Structure Of Human 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase Complexed With Formycin A
pdb|1SD2|A Chain A, Structure Of Human 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase Complexed With 5'-Methylthiotubercidin
pdb|3OZC|A Chain A, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase In Complex With Pcl-Phenylthiodadmeimma
pdb|3OZD|A Chain A, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase In Complex With Pcl-Phenylthiodadmeimma
pdb|3OZD|B Chain B, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase In Complex With Pcl-Phenylthiodadmeimma
pdb|3OZE|A Chain A, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
pdb|3OZE|B Chain B, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
pdb|3OZE|C Chain C, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
pdb|3OZE|D Chain D, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
pdb|3OZE|E Chain E, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
pdb|3OZE|F Chain F, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
Length = 283
Score = 330 bits (845), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 152/263 (57%), Positives = 196/263 (74%)
Query: 16 LNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIW 75
L++P+ILE E VDTP+G PSD L+ G I+ VDCV+LARHGR+HTI PS VNY+ANIW
Sbjct: 20 LDDPEILEGRTEKYVDTPFGKPSDALILGKIKNVDCVLLARHGRQHTIMPSKVNYQANIW 79
Query: 76 ALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIP 135
ALK GCTHVIV+TA GSL+EEIQPGD+VI+D FIDRT R Q+F+DGS + GV HIP
Sbjct: 80 ALKEEGCTHVIVTTACGSLREEIQPGDIVIIDQFIDRTTMRPQSFYDGSHSCARGVCHIP 139
Query: 136 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLV 195
M F TR+++I++ K+LG + H KGT V IEGPRFSSRAES +FR+W A ++NMT V
Sbjct: 140 MAEPFCPKTREVLIETAKKLGLRCHSKGTMVTIEGPRFSSRAESFMFRTWGADVINMTTV 199
Query: 196 PEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIA 255
PEVVLAKEAG+ YA++AMATDYDCW++ V V VLKT KEN K L + +P+I
Sbjct: 200 PEVVLAKEAGICYASIAMATDYDCWKEHEEAVSVDRVLKTLKENANKAKSLLLTTIPQIG 259
Query: 256 AKDWTNEITELKSVVETSNMSPQ 278
+ +W+ + LK++ + S + P+
Sbjct: 260 STEWSETLHNLKNMAQFSVLLPR 282
>pdb|1WTA|A Chain A, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine From
Aeropyrum Pernix (R32 Form)
Length = 275
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 154/244 (63%), Gaps = 9/244 (3%)
Query: 16 LNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIW 75
L +P I+EN EV V TPYG PSD ++ G + GV L RHGR H I P +NYRANIW
Sbjct: 22 LYDPGIVENPVEVKVSTPYGNPSDFIVVGDVAGVKVAFLPRHGRGHRIPPHAINYRANIW 81
Query: 76 ALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQ-TFFDGSENSPNGVLHI 134
ALK++G VI +A GSL+E+ +PGD V+ D FID T+ R TF+DG +H+
Sbjct: 82 ALKALGVKWVISVSAVGSLREDYRPGDFVVPDQFIDMTKNRRHYTFYDGPVT-----VHV 136
Query: 135 PMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRS-WNAHLVNMT 193
M F RQ +IDS + LG+ H++GT VCIEGPRFS+RAES +++ + A ++ MT
Sbjct: 137 SMADPFCEDLRQRLIDSGRRLGYTVHERGTYVCIEGPRFSTRAESRVWKDVFKADIIGMT 196
Query: 194 LVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPK 253
LVPE+ LA EA L YA +AM TDYD W D V +V + NVE+ ++ ++PK
Sbjct: 197 LVPEINLACEAQLCYATLAMVTDYDVWAD--RPVTAEEVERVMISNVERARRMLYDVIPK 254
Query: 254 IAAK 257
+A +
Sbjct: 255 LAGE 258
>pdb|1V4N|A Chain A, Structure Of 5'-Deoxy-5'-Methylthioadenosine Phosphorylase
Homologue From Sulfolobus Tokodaii
pdb|1V4N|B Chain B, Structure Of 5'-Deoxy-5'-Methylthioadenosine Phosphorylase
Homologue From Sulfolobus Tokodaii
pdb|1V4N|C Chain C, Structure Of 5'-Deoxy-5'-Methylthioadenosine Phosphorylase
Homologue From Sulfolobus Tokodaii
Length = 281
Score = 222 bits (565), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/243 (46%), Positives = 151/243 (62%), Gaps = 8/243 (3%)
Query: 16 LNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIW 75
L +PQIL N +E+ V TPYG PSD ++ G ++G L RHGR H I P +NYRANIW
Sbjct: 19 LYDPQILTNVKEIKVYTPYGEPSDNIILGELEGRKVAFLPRHGRGHRIPPHKINYRANIW 78
Query: 76 ALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIP 135
ALKS+G VI +A GSL+ + +PGD V+ + FID T+ R TFFDG V H+
Sbjct: 79 ALKSLGVKWVIAVSAVGSLRLDYKPGDFVVPNQFIDMTKGRTYTFFDGPT-----VAHVS 133
Query: 136 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRS-WNAHLVNMTL 194
M F R II+DS K+LG HDKGT +CIEGPRFS+RAES +++ + A ++ MTL
Sbjct: 134 MADPFCEHLRSIILDSAKDLGITTHDKGTYICIEGPRFSTRAESIVWKEVFKADIIGMTL 193
Query: 195 VPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKI 254
VPEV LA EA + Y+ + M TDYD + D V +V K EN K+ KL ++ ++
Sbjct: 194 VPEVNLACEAEMCYSVIGMVTDYDVFADI--PVTAEEVTKVMAENTAKVKKLLYEVIRRL 251
Query: 255 AAK 257
K
Sbjct: 252 PEK 254
>pdb|2A8Y|A Chain A, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|B Chain B, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|C Chain C, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|D Chain D, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|E Chain E, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|F Chain F, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|G Chain G, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|H Chain H, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|I Chain I, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|J Chain J, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|K Chain K, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|L Chain L, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|3T94|A Chain A, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
pdb|3T94|B Chain B, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
pdb|3T94|C Chain C, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
pdb|3T94|D Chain D, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
pdb|3T94|E Chain E, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
pdb|3T94|F Chain F, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
Length = 270
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 145/243 (59%), Gaps = 8/243 (3%)
Query: 16 LNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIW 75
L +P I ++E+ V TPYG PSD + G I L RHGR H I P +NYRANIW
Sbjct: 18 LYDPGIFSESKEIKVYTPYGQPSDFITIGKIGNKSVAFLPRHGRGHRIPPHKINYRANIW 77
Query: 76 ALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIP 135
ALK +G VI +A GSL+ + + GD VI D FID T+ R +FFDG V H+
Sbjct: 78 ALKELGVRWVISVSAVGSLRMDYKLGDFVIPDQFIDMTKNREYSFFDGPV-----VAHVS 132
Query: 136 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRS-WNAHLVNMTL 194
M F NS R++ I++ KEL K H+ GT +CIEGPRFS+RAES +R + A ++ MTL
Sbjct: 133 MADPFCNSLRKLAIETAKELNIKTHESGTYICIEGPRFSTRAESRTWREVYKADIIGMTL 192
Query: 195 VPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKI 254
VPEV LA EA + YA +AM TDYD + + V +V + EN EK KL ++ K+
Sbjct: 193 VPEVNLACEAQMCYATIAMVTDYDVFAEI--PVTAEEVTRVMAENTEKAKKLLYALIQKL 250
Query: 255 AAK 257
K
Sbjct: 251 PEK 253
>pdb|4GLF|A Chain A, Crystal Structure Of Methylthioadenosine Phosphorylase
Sourced From An Antarctic Soil Metagenomic Library
pdb|4GLJ|A Chain A, Crystal Structure Of Methylthioadenosine Phosphorylase In
Complex With Rhodamine B
Length = 297
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 141/246 (57%), Gaps = 10/246 (4%)
Query: 16 LNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIW 75
L Q L N + V ++TPYG PSD ++ G + GV L RHG+ H + PS V YRANI+
Sbjct: 24 LYQMQALTNKRSVKIETPYGEPSDDIVLGELNGVTVAFLTRHGQGHRLTPSEVPYRANIY 83
Query: 76 ALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFF-DGSENSPNGVLHI 134
ALK++G +++ +A GSLQE ++P D+VI D ID T+ R+ TFF DG+ V H+
Sbjct: 84 ALKTLGVRYIVSVSAVGSLQETLKPLDMVIPDQMIDMTKQRVSTFFGDGA------VAHV 137
Query: 135 PMEPAFDNSTRQIII---DSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVN 191
M I+I D+ + H K T VCIEGP+FS+RAES+ +R A ++
Sbjct: 138 SMADPLCPEVADILIRAYDNADIADGQCHAKATYVCIEGPQFSTRAESHWYRQMQADIIG 197
Query: 192 MTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 251
MT +PE LA+EA + YA +A+ TD+DCW V ++ +N + ++ V
Sbjct: 198 MTNMPEAKLAREASIAYATLALVTDFDCWHPNEQAVSADYAIQNLMKNADNAQQVIKQAV 257
Query: 252 PKIAAK 257
IA++
Sbjct: 258 ALIASE 263
>pdb|3OZB|A Chain A, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
pdb|3OZB|B Chain B, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
pdb|3OZB|C Chain C, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
pdb|3OZB|D Chain D, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
pdb|3OZB|E Chain E, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
pdb|3OZB|F Chain F, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
Length = 259
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 116/228 (50%), Gaps = 6/228 (2%)
Query: 25 AQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCTH 84
++ + ++TPYGAPS L +G G + + LARHG H P VNYRAN+WALK G
Sbjct: 35 SESLPIETPYGAPSAPLQRGRYAGREVLFLARHGHPHRFPPHQVNYRANLWALKQAGAEA 94
Query: 85 VIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNST 144
VI A G + + G L + ID T R T+F G V HI +D
Sbjct: 95 VIAVNAVGGIHAAMGTGHLCVPHQLIDYTSGREHTYFAGDIEH---VTHIDFSHPYDEPL 151
Query: 145 RQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLVNMTLVPEVVLAKE 203
RQ +I++L+ LG G C +GPR + AE + L R N +V MT +PE LA+E
Sbjct: 152 RQRLIEALRALGLAHSSHGVYACTQGPRLETVAEIARLERDGN-DIVGMTGMPEAALARE 210
Query: 204 AGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 251
L YA +A+ + + G + +A++ + + + K+ ++ ++
Sbjct: 211 LDLPYACLALVVNPAAGKSAG-IITMAEIEQALHDGIGKVREVLARVL 257
>pdb|3KHS|A Chain A, Crystal Structure Of Grouper Iridovirus Purine Nucleoside
Phosphorylase
pdb|3KHS|B Chain B, Crystal Structure Of Grouper Iridovirus Purine Nucleoside
Phosphorylase
pdb|3KHS|C Chain C, Crystal Structure Of Grouper Iridovirus Purine Nucleoside
Phosphorylase
pdb|3KHS|D Chain D, Crystal Structure Of Grouper Iridovirus Purine Nucleoside
Phosphorylase
Length = 285
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPSNVNYRAN--IWALKSVGCTHVIVSTATGSLQEEI 98
L+ G++ GV CV + GR H + + RA + K++G V+++ A G L
Sbjct: 65 LIFGSVNGVSCVCM--KGRFH-LYEGHTAARATFPMRVFKALGVKIVVLTNAAGGLNPSY 121
Query: 99 QPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFK 158
+PGD +++ I+ G + G M +D + R+ I + +ELG
Sbjct: 122 RPGDFMVVRDHINLPGLAGANPLTGPNDDTEGERFPSMTSVYDKTLRKYAISAARELGMS 181
Query: 159 FH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDY 217
+ +G C+ GP F + AE + R + V M+ PE ++AK G+ AV++ ++
Sbjct: 182 YATHEGVYCCVNGPSFETPAECKILRLMGSDAVGMSTAPETIVAKHGGMRCLAVSLISNV 241
Query: 218 ---DCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKI 254
+C +T + +VL+ +E ++T L ++ KI
Sbjct: 242 IASNC--ETPAEPTHEEVLRAGEEASARMTALVKLVIEKI 279
>pdb|1VFN|A Chain A, Purine Nucleoside Phosphorylase
Length = 281
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L
Sbjct: 65 LVFGILNGRACVMM--QGRFHMYEGYPFWKVTFPVRVFRL--LGVETLVVTNAAGGLNPN 120
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G GV M A+D RQ + K++G
Sbjct: 121 FEVGDIMLIRDHINLPGFSGQNPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGE 180
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE L R+ A V M+ VPEV++A+ GL ++ T
Sbjct: 181 QRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 240
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVP 252
DY+ + N V + K + +E+ L + +P
Sbjct: 241 KVIMDYES-QGKANHEEVLEAGKQAAQKLEQFVSLLMASIP 280
>pdb|1LV8|A Chain A, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LV8|B Chain B, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LV8|C Chain C, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LV8|D Chain D, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LV8|E Chain E, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LV8|F Chain F, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|A Chain A, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|B Chain B, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|C Chain C, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|D Chain D, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|E Chain E, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|F Chain F, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
Length = 289
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L
Sbjct: 68 LVFGILNGRACVMM--QGRFHMYEGYPFWKVTFPVRVFRL--LGVETLVVTNAAGGLNPN 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G GV M A+D RQ + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGQNPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE L R+ A V M+ VPEV++A+ GL ++ T
Sbjct: 184 QRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVP 252
DY+ + N V + K + +E+ L + +P
Sbjct: 244 KVIMDYES-QGKANHEEVLEAGKQAAQKLEQFVSLLMASIP 283
>pdb|1B8N|A Chain A, Purine Nucleoside Phosphorylase
pdb|1B8O|A Chain A, Purine Nucleoside Phosphorylase
pdb|3FUC|A Chain A, Recombinant Calf Purine Nucleoside Phosphorylase In A
Binary Complex With Multisubstrate Analogue Inhibitor
9-(5',5'- Difluoro-5'-Phosphonopentyl)-9-Deazaguanine
Structure In A New Space Group With One Full Trimer In
The Asymmetric Unit
pdb|3FUC|B Chain B, Recombinant Calf Purine Nucleoside Phosphorylase In A
Binary Complex With Multisubstrate Analogue Inhibitor
9-(5',5'- Difluoro-5'-Phosphonopentyl)-9-Deazaguanine
Structure In A New Space Group With One Full Trimer In
The Asymmetric Unit
pdb|3FUC|C Chain C, Recombinant Calf Purine Nucleoside Phosphorylase In A
Binary Complex With Multisubstrate Analogue Inhibitor
9-(5',5'- Difluoro-5'-Phosphonopentyl)-9-Deazaguanine
Structure In A New Space Group With One Full Trimer In
The Asymmetric Unit
Length = 284
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L
Sbjct: 68 LVFGILNGRACVMM--QGRFHMYEGYPFWKVTFPVRVFRL--LGVETLVVTNAAGGLNPN 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ + G GV M A+D RQ + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE L R+ A V M+ VPEV++A+ GL ++ T
Sbjct: 184 QRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVP 252
DY+ + N V + K + +E+ L + +P
Sbjct: 244 KVIMDYES-QGKANHEEVLEAGKQAAQKLEQFVSLLMASIP 283
>pdb|2QPL|A Chain A, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase Complexed To A Novel Purine Analogue
Length = 282
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L
Sbjct: 66 LVFGILNGRACVMM--QGRFHMYEGYPFWKVTFPVRVFRL--LGVETLVVTNAAGGLNPN 121
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ + G GV M A+D RQ + K++G
Sbjct: 122 FEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGE 181
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE L R+ A V M+ VPEV++A+ GL ++ T
Sbjct: 182 QRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 241
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVP 252
DY+ + N V + K + +E+ L + +P
Sbjct: 242 KVIMDYES-QGKANHEEVLEAGKQAAQKLEQFVSLLMASIP 281
>pdb|1V48|A Chain A, Calf Spleen Purine Nucleoside Phosphorylase (Pnp) Binary
Complex With 9-(5,5-Difluoro-5-Phosphonopenthyl)guanine
pdb|2AI1|A Chain A, Purine Nucleoside Phosphorylase From Calf Spleen
pdb|2AI2|A Chain A, Purine Nucleoside Phosphorylase From Calf Spleen
pdb|2AI3|A Chain A, Purine Nucleoside Phosphorylase From Calf Spleen
Length = 289
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L
Sbjct: 68 LVFGILNGRACVMM--QGRFHMYEGYPFWKVTFPVRVFRL--LGVETLVVTNAAGGLNPN 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ + G GV M A+D RQ + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE L R+ A V M+ VPEV++A+ GL ++ T
Sbjct: 184 QRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVP 252
DY+ + N V + K + +E+ L + +P
Sbjct: 244 KVIMDYES-QGKANHEEVLEAGKQAAQKLEQFVSLLMASIP 283
>pdb|1FXU|A Chain A, Purine Nucleoside Phosphorylase From Calf Spleen In
Complex With N(7)- Acycloguanosine Inhibitor And A
Phosphate Ion
Length = 289
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 9/226 (3%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L
Sbjct: 68 LVFGILNGRACVMM--QGRFHMYEGYPFWKVTFPVRVFRL--LGVETLVVTNAAGGLNPN 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G GV M A+D RQ + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGQNPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD 216
+ +GT V + GP F + AE L R+ A V M+ VPEV++A+ GL ++ T+
Sbjct: 184 QRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 217 YDCW-RDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIAAKDWTN 261
++ K +VL+ K+ +K+ + ++ I T
Sbjct: 244 KVIMDTESQGKANHEEVLEAGKQAAQKLEQFVSLLMASIPVSGHTG 289
>pdb|4EAR|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EAR|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EAR|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L +
Sbjct: 103 LVFGFLNGRACVMM--QGRFHMYEGYPLYKVTFPVRVFHL--LGVDTLVVTNAAGGLNPK 158
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G + G M A+D + RQ + + K++G
Sbjct: 159 FEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTYKQMGE 218
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE + + A V M+ VPEV++A+ GL ++ T
Sbjct: 219 QRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 278
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 251
DY+ K +VL K+ +K+ + FV I+
Sbjct: 279 KVIMDYESL----EKANXEEVLAAGKQAAQKLEQ-FVSIL 313
>pdb|2A0X|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257f
Mutant
pdb|2ON6|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257f With Imm-H
Length = 289
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L +
Sbjct: 68 LVFGFLNGRACVMM--QGRFHMYEGYPLWKVTFPVRVFHL--LGVDTLVVTNAAGGLNPK 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G + G M A+D + RQ + + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE + + A V M+ VPEV++A+ GL ++ T
Sbjct: 184 QRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 251
DY+ K +VL K+ +K+ + FV I+
Sbjct: 244 KVIMDYESL----EKANFEEVLAAGKQAAQKLEQ-FVSIL 278
>pdb|2A0Y|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257d
Mutant
pdb|2OC4|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257d With Imm-H
Length = 289
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L +
Sbjct: 68 LVFGFLNGRACVMM--QGRFHMYEGYPLWKVTFPVRVFHL--LGVDTLVVTNAAGGLNPK 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G + G M A+D + RQ + + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE + + A V M+ VPEV++A+ GL ++ T
Sbjct: 184 QRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 251
DY+ ++ +VL K+ +K+ + FV I+
Sbjct: 244 KVIMDYESLEKANDE----EVLAAGKQAAQKLEQ-FVSIL 278
>pdb|1TCU|A Chain A, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Phosphate And
Acetate
pdb|1TCU|B Chain B, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Phosphate And
Acetate
pdb|1TCU|C Chain C, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Phosphate And
Acetate
pdb|1TCV|A Chain A, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Non-detergent
Sulfobetaine 195 And Acetate
pdb|1TCV|B Chain B, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Non-detergent
Sulfobetaine 195 And Acetate
pdb|1TCV|C Chain C, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Non-detergent
Sulfobetaine 195 And Acetate
pdb|1TD1|A Chain A, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Acetate
pdb|1TD1|B Chain B, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Acetate
pdb|1TD1|C Chain C, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Acetate
pdb|3FNQ|A Chain A, Crystal Structure Of Schistosoma Purine Nucleoside
Phosphorylase In Complex With Hypoxanthine
pdb|3FNQ|B Chain B, Crystal Structure Of Schistosoma Purine Nucleoside
Phosphorylase In Complex With Hypoxanthine
pdb|3FNQ|C Chain C, Crystal Structure Of Schistosoma Purine Nucleoside
Phosphorylase In Complex With Hypoxanthine
pdb|3DJF|A Chain A, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In A Complex With Bcx-34
pdb|3DJF|B Chain B, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In A Complex With Bcx-34
pdb|3DJF|C Chain C, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In A Complex With Bcx-34
pdb|3E0Q|A Chain A, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase Complexed With A Novel Monocyclic
Inhibitor
pdb|3E0Q|B Chain B, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase Complexed With A Novel Monocyclic
Inhibitor
pdb|3E0Q|C Chain C, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase Complexed With A Novel Monocyclic
Inhibitor
pdb|3E9R|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With Adenine
pdb|3E9R|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With Adenine
pdb|3E9R|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With Adenine
pdb|3E9Z|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With 6-Chloroguanine
pdb|3E9Z|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With 6-Chloroguanine
pdb|3E9Z|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With 6-Chloroguanine
pdb|3F8W|A Chain A, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Adenosine
pdb|3F8W|B Chain B, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Adenosine
pdb|3F8W|C Chain C, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Adenosine
pdb|3FAZ|A Chain A, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Inosine
pdb|3FAZ|B Chain B, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Inosine
pdb|3FAZ|C Chain C, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Inosine
pdb|3FB1|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase In
Complex With Ribose-1-Phosphate
pdb|3FB1|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase In
Complex With Ribose-1-Phosphate
pdb|3FB1|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase In
Complex With Ribose-1-Phosphate
pdb|3IEX|A Chain A, Schistosoma Purine Nucleoside Phosphorylase In Complex
With Guanosine
pdb|3IEX|B Chain B, Schistosoma Purine Nucleoside Phosphorylase In Complex
With Guanosine
pdb|3IEX|C Chain C, Schistosoma Purine Nucleoside Phosphorylase In Complex
With Guanosine
Length = 287
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINP-SNVNYRANIWALKSVGCTHVIVSTATGSLQEEIQ 99
L+ GT+ G V++ GR H SN I +K +G ++VS A G L ++
Sbjct: 70 LIFGTLSGRKVVVM--QGRFHMYEGYSNDTVALPIRVMKLLGVKILMVSNAAGGLNRSLK 127
Query: 100 PGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF-K 158
GD VIL I + G G + A+D R++ + +E GF
Sbjct: 128 LGDFVILKDHIYLPGLGLNNILVGPNQEAFGTRFPALSNAYDRDLRKLAVQVAEENGFGN 187
Query: 159 FHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYD 218
+G V GP + + AE + + +V M+ +PEVV+A+ G+ AV++ T+
Sbjct: 188 LVHQGVYVMNGGPCYETPAECTMLLNMGCDVVGMSTIPEVVIARHCGIQVFAVSLVTN-- 245
Query: 219 CWRDTGNKVCVADVLKTFKENVEKI 243
+ V DV K N E++
Sbjct: 246 --------ISVLDVESDLKPNHEEV 262
>pdb|1A9O|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
Phosphate
pdb|1A9P|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
9-deazainosine And Phosphate
pdb|1A9S|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
Inosine And Sulfate
Length = 289
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 9/226 (3%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L
Sbjct: 68 LVFGILNGRACVMM--QGRFHMYEGYPFWKVTFPVRVFRL--LGVETLVVTNAAGGLNPN 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ + G GV M A+D RQ + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD 216
+ +GT V + GP F + AE L R+ A V M+ VPEV++A+ GL ++ T+
Sbjct: 184 QRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 217 YDCW-RDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIAAKDWTN 261
++ K +VL+ K+ +K+ + ++ I T
Sbjct: 244 KVIMDTESQGKANHEEVLEAGKQAAQKLEQFVSLLMASIPVSGHTG 289
>pdb|4EB8|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EB8|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EB8|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4ECE|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|D Chain D, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|E Chain E, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|F Chain F, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4GKA|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|D Chain D, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|E Chain E, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|F Chain F, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
Length = 324
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L +
Sbjct: 103 LVFGFLNGRACVMM--QGRFHMYEGYPLYKVTFPVRVFHL--LGVDTLVVTNAAGGLNPK 158
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G + G M A+D + RQ + + K++G
Sbjct: 159 FEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTYKQMGE 218
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE + + A V M+ VPEV++A+ GL ++ T
Sbjct: 219 QRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 278
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 251
DY+ K +VL K+ +K+ + FV I+
Sbjct: 279 KVIMDYESL----EKANWEEVLAAGKQAAQKLEQ-FVSIL 313
>pdb|1A9T|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
9-Deazainosine And Phosphate
Length = 284
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 9/211 (4%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L
Sbjct: 68 LVFGILNGRACVMM--QGRFHMYEGYPFWKVTFPVRVFRL--LGVETLVVTNAAGGLNPN 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ + G GV M A+D RQ + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD 216
+ +GT V + GP F + AE L R+ A V M+ VPEV++A+ GL ++ T+
Sbjct: 184 QRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 217 YDCW-RDTGNKVCVADVLKTFKENVEKITKL 246
++ K +VL+ K+ +K+ +
Sbjct: 244 KVIMDTESQGKANHEEVLEAGKQAAQKLEQF 274
>pdb|1A9Q|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
Inosine
pdb|1A9R|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
Hypoxanthine And Sulfate
Length = 282
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 9/219 (4%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L
Sbjct: 68 LVFGILNGRACVMM--QGRFHMYEGYPFWKVTFPVRVFRL--LGVETLVVTNAAGGLNPN 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ + G GV M A+D RQ + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD 216
+ +GT V + GP F + AE L R+ A V M+ VPEV++A+ GL ++ T+
Sbjct: 184 QRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 217 YDCW-RDTGNKVCVADVLKTFKENVEKITKLFVHIVPKI 254
++ K +VL+ K+ +K+ + ++ I
Sbjct: 244 KVIMDTESQGKANHEEVLEAGKQAAQKLEQFVSLLMASI 282
>pdb|1PF7|E Chain E, Crystal Structure Of Human Pnp Complexed With Immucillin H
pdb|1RR6|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Immucillin-H And Phosphate
pdb|1RSZ|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Dadme-Immucillin-H And Sulfate
pdb|1RT9|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Immucillin-H And Sulfate
pdb|1YRY|E Chain E, Crystal Structure Of Human Pnp Complexed With Mesg
pdb|1ULA|A Chain A, Application Of Crystallographic And Modeling Methods In
The Design Of Purine Nucleoside Phosphorylase Inhibitors
pdb|1ULB|A Chain A, Application Of Crystallographic And Modeling Methods In
The Design Of Purine Nucleoside Phosphorylase Inhibitors
pdb|3BGS|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase With L-
Dadme-Immh And Phosphate
pdb|2Q7O|E Chain E, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With L- Immucillin-H
pdb|3D1V|A Chain A, Crystal Structure Of Human Pnp Complexed With
2-Mercapto(3h) Quinazolinone
pdb|3K8O|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|Q Chain Q, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|S Chain S, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|T Chain T, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|U Chain U, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|Y Chain Y, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8Q|A Chain A, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Serme-Immucillin H
pdb|3INY|A Chain A, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With 7-Deazaguanine
Length = 289
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L +
Sbjct: 68 LVFGFLNGRACVMM--QGRFHMYEGYPLWKVTFPVRVFHL--LGVDTLVVTNAAGGLNPK 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G + G M A+D + RQ + + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE + + A V M+ VPEV++A+ GL ++ T
Sbjct: 184 QRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 251
DY+ ++ +VL K+ +K+ + FV I+
Sbjct: 244 KVIMDYESLEKANHE----EVLAAGKQAAQKLEQ-FVSIL 278
>pdb|1PBN|A Chain A, Purine Nucleoside Phosphorylase
pdb|3PNP|A Chain A, The High Resolution Crystal Structure Of Bovine Spleen
Purine Nucleoside Phosphorylase In Complex Forms With
Phosphate And 9- Deazainosine
pdb|4PNP|A Chain A, The High Resolution Crystal Structure Of Bovine Spleen
Purine Nucleoside Phosphorylase In Complex Forms With
Phosphate And 9- Deazainosine
Length = 289
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 9/226 (3%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L
Sbjct: 68 LVFGILNGRACVMM--QGRFHMYEGYPFWKVTFPVRVFRL--LGVETLVVTNAAGGLNPN 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ + G GV M A+D RQ + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD 216
+ +GT V + GP F + AE L R+ A V M+ VPEV++A+ GL ++ T+
Sbjct: 184 QRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 217 YDCW-RDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIAAKDWTN 261
++ K +VL+ K+ +K+ + ++ I T
Sbjct: 244 KVIMDTESQGKANHEEVLEAGKQAAQKLEQFVSLLMASIPVSGHTG 289
>pdb|3PHB|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|Q Chain Q, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|S Chain S, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|T Chain T, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|U Chain U, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|Y Chain Y, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
Length = 324
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L +
Sbjct: 103 LVFGFLNGRACVMM--QGRFHMYEGYPLWKVTFPVRVFHL--LGVDTLVVTNAAGGLNPK 158
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G + G M A+D + RQ + + K++G
Sbjct: 159 FEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGE 218
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE + + A V M+ VPEV++A+ GL ++ T
Sbjct: 219 QRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 278
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 251
DY+ ++ +VL K+ +K+ + FV I+
Sbjct: 279 KVIMDYESLEKANHE----EVLAAGKQAAQKLEQ-FVSIL 313
>pdb|1M73|E Chain E, Crystal Structure Of Human Pnp At 2.3a Resolution
pdb|1RCT|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
Complexed With Inosine
pdb|1V2H|E Chain E, Crystal Structure Of Human Pnp Complexed With Guanine
pdb|1V3Q|E Chain E, Structure Of Human Pnp Complexed With Ddi
pdb|1PWY|E Chain E, Crystal Structure Of Human Pnp Complexed With Acyclovir
pdb|1RFG|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
Complexed With Guanosine
pdb|1V41|E Chain E, Crystal Structure Of Human Pnp Complexed With 8-Azaguanine
pdb|1V45|E Chain E, Crystal Structure Of Human Pnp Complexed With
3-Deoxyguanosine
Length = 288
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L +
Sbjct: 67 LVFGFLNGRACVMM--QGRFHMYEGYPLWKVTFPVRVFHL--LGVDTLVVTNAAGGLNPK 122
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G + G M A+D + RQ + + K++G
Sbjct: 123 FEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGE 182
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE + + A V M+ VPEV++A+ GL ++ T
Sbjct: 183 QRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 242
Query: 216 ----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 251
DY+ ++ +VL K+ +K+ + FV I+
Sbjct: 243 KVIMDYESLEKANHE----EVLAAGKQAAQKLEQ-FVSIL 277
>pdb|2A0W|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257g
Mutant
pdb|2OC9|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257g With Imm-H
Length = 289
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L +
Sbjct: 68 LVFGFLNGRACVMM--QGRFHMYEGYPLWKVTFPVRVFHL--LGVDTLVVTNAAGGLNPK 123
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G + G M A+D + RQ + + K++G
Sbjct: 124 FEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGE 183
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT- 215
+ +GT V + GP F + AE + + A V M+ VPEV++A+ GL ++ T
Sbjct: 184 QRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITN 243
Query: 216 ----DYDCW-RDTGNKVCVADVLKTFKENVEKITKLFVHIVP 252
DY+ + G +V A K + +E+ + + +P
Sbjct: 244 KVIMDYESLEKANGEEVLAAG--KQAAQKLEQFVSILMASIP 283
>pdb|3GB9|A Chain A, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GB9|B Chain B, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GB9|C Chain C, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GGS|A Chain A, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
pdb|3GGS|B Chain B, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
pdb|3GGS|C Chain C, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
Length = 311
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPS---NVNYRANIWALKSVGCTHVIVSTATGSLQEE 97
L+ G + G CV++ GR H V + ++ L +G ++V+ A G L +
Sbjct: 90 LVFGFLNGRACVMM--QGRFHMYEGYPLWKVTFPVRVFHL--LGVDTLVVTNAAGGLNPK 145
Query: 98 IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGF 157
+ GD++++ I+ Q G + G M A+D + RQ + + K++G
Sbjct: 146 FEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGE 205
Query: 158 KFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD 216
+ +GT V + GP F + AE + + A V M+ VPEV++A+ GL ++ TD
Sbjct: 206 QRELQEGTYVMVAGPSFQTVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITD 265
>pdb|1YQQ|A Chain A, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YQQ|B Chain B, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YQQ|C Chain C, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YQU|A Chain A, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YQU|B Chain B, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YQU|C Chain C, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|A Chain A, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|B Chain B, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|C Chain C, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|D Chain D, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|E Chain E, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|F Chain F, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
Length = 277
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 8/188 (4%)
Query: 30 VDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRAN-IWALKSVGCTHVIVS 88
V T +G +++L G +QGV V + GR H + + I K +GC + +
Sbjct: 59 VSTVHGHAGELVL-GHLQGVPVVCM--KGRGHFYEGRGMTIMTDAIRTFKLLGCELLFCT 115
Query: 89 TATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQII 148
A GSL+ E+ G LV L D T T G + G + A+D R ++
Sbjct: 116 NAAGSLRPEVGAGSLVALK---DHINTMPGTPMVGLNDDRFGERFFSLANAYDAEYRALL 172
Query: 149 IDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLY 208
KE GF +G V GP F + AE + + +V M++VPEV+ A+ L
Sbjct: 173 QKVAKEEGFPL-TEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVVPEVISARHCDLKV 231
Query: 209 AAVAMATD 216
AV+ T+
Sbjct: 232 VAVSAITN 239
>pdb|3LA8|A Chain A, The Crystal Structure Of Smu.1229 From Streptococcus
Mutans Ua159
pdb|3LBA|A Chain A, The Crystal Structure Of Smu.1229 From Streptococcus
Mutans Ua159 Bound To Hypoxanthine
Length = 303
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 53 ILARHGRKHTINPSNVNYRA-NIWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFID 111
+LA GR H +++ I +K++GC +IV+ A G + PG L+ + I+
Sbjct: 109 VLALQGRFHYYEGNSMELVTFPIRIMKALGCQGLIVTNAAGGIG--FGPGTLMAISDHIN 166
Query: 112 RTRTRIQTFFDGSENSPNGVLHIP-MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEG 170
T EN + P M A+ R++ ++G K D+G + + G
Sbjct: 167 LTGANPLM----GENLDDFGFRFPDMSNAYTADYREVAHQVADKIGIKL-DEGVYIGVSG 221
Query: 171 PRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDC-WRDTGNKVCV 229
P + + AE F++ A V M+ VPEV++A +GL ++ T+Y ++ N V
Sbjct: 222 PSYETPAEIRAFKTLGADAVGMSTVPEVIVAVHSGLKVLGISAITNYAAGFQSELNHEEV 281
Query: 230 ADVLKTFKENVEKITK 245
V + KE+ + + K
Sbjct: 282 VAVTQQIKEDFKGLVK 297
>pdb|3ODG|A Chain A, Crystal Structure Of Xanthosine Phosphorylase Bound With
Xanthine From Yersinia Pseudotuberculosis
Length = 287
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 41 LLQGTIQGVDCVILARHGRKHTINPSNVNYRAN-IWALKSVGCTHVIVSTATGSLQEEIQ 99
L+ G + GV ++ GR H ++ N + K +GC + + A GSL+ E+
Sbjct: 77 LVLGDLCGVP--VMCMKGRGHFYEGKGMSIMTNPVRTFKLMGCEFLFCTNAAGSLRPEVL 134
Query: 100 PGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKF 159
PG +V+L D T T G + G + A+D R + ++L
Sbjct: 135 PGSVVMLK---DHINTMPGTPLVGPNDDRFGPRFFSLANAYDKDLRADMAKIAQQLDIPL 191
Query: 160 HDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD 216
+ G V GP F + AE + + +V M++VPEV+ A GL A+ T+
Sbjct: 192 TE-GVFVSYPGPCFETPAEIRMMQIIGGDVVGMSVVPEVLSAAHCGLKVIALTAITN 247
>pdb|2P4S|A Chain A, Structure Of Purine Nucleoside Phosphorylase From
Anopheles Gambiae In Complex With Dadme-immh
pdb|2P4S|B Chain B, Structure Of Purine Nucleoside Phosphorylase From
Anopheles Gambiae In Complex With Dadme-immh
pdb|2P4S|C Chain C, Structure Of Purine Nucleoside Phosphorylase From
Anopheles Gambiae In Complex With Dadme-immh
Length = 373
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 61/144 (42%), Gaps = 1/144 (0%)
Query: 74 IWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLH 133
+ + +GCTH+I + A G + + GD++++ I+ G + G
Sbjct: 185 VRVMHLIGCTHLIATNAAGGANPKYRVGDIMLIKDHINLMGFAGNNPLQGPNDERFGPRF 244
Query: 134 IPMEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNM 192
M +D Q +++G + +G C+ GP F + AE + + M
Sbjct: 245 FGMANTYDPKLNQQAKVIARQIGIENELREGVYTCLGGPNFETVAEVKMLSMLGVDAIGM 304
Query: 193 TLVPEVVLAKEAGLLYAAVAMATD 216
+ V E++ A+ G+ A ++ T+
Sbjct: 305 STVHEIITARHCGMTCFAFSLITN 328
>pdb|1VMK|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(Tm1596) From Thermotoga Maritima At 2.01 A Resolution
pdb|1VMK|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(Tm1596) From Thermotoga Maritima At 2.01 A Resolution
pdb|1VMK|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(Tm1596) From Thermotoga Maritima At 2.01 A Resolution
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 19/212 (8%)
Query: 38 SDVLLQGTIQGVDCVILARHGRKHTI---NPSNVNYRANIWALKSVGCTHVIVSTATGSL 94
S L+ G I +I+A GR H +P+ V + ++ K VG V+V+ A G++
Sbjct: 72 SGKLVFGRISDKPVMIMA--GRFHLYEGHDPATVAF--PVYLAKYVGVKGVVVTNAAGAI 127
Query: 95 QEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKE 154
E +PG+++++ R I F PN + P F + + + + ++
Sbjct: 128 NPEFKPGEIILV-------RDIINFMFRNPLRGPNDE---KIGPRFPDMSSVVDPEWARK 177
Query: 155 LGFKFHDK-GTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAM 213
+ + K G + + GP + + AE +F A LV M+ VPEV+ AK GL +
Sbjct: 178 IQERLSLKEGVYIGVLGPSYETPAEIRVFEKLGADLVGMSTVPEVIAAKHCGLKVVVFSC 237
Query: 214 ATDYDCWRDTGNKVCVADVLKTFKENVEKITK 245
T+ G ++ +V++T K KI K
Sbjct: 238 VTNMAAGITHG-RLSHEEVVRTTKMAQGKIEK 268
>pdb|3QK3|A Chain A, Crystal Structure Of Human Beta-Crystallin B3
pdb|3QK3|B Chain B, Crystal Structure Of Human Beta-Crystallin B3
pdb|3QK3|C Chain C, Crystal Structure Of Human Beta-Crystallin B3
Length = 184
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 126 NSPNGVLHIPMEPAFDNSTRQIIIDSLKEL-GFKFHDK--------GTAVCIEGPRFSSR 176
+SP+ LH+ PAF +I+ D + L F D+ GT V E P + R
Sbjct: 95 DSPHHKLHLFENPAFSGRKMEIVDDDVPSLWAHGFQDRVASVRAINGTWVGYEFPGYRGR 154
Query: 177 A---ESNLFRSWN 186
E +R WN
Sbjct: 155 QYVFERGEYRHWN 167
>pdb|3E7H|A Chain A, The Crystal Structure Of The Beta Subunit Of The Dna-
Directed Rna Polymerase From Vibrio Cholerae O1 Biovar
Eltor
pdb|3E7H|B Chain B, The Crystal Structure Of The Beta Subunit Of The Dna-
Directed Rna Polymerase From Vibrio Cholerae O1 Biovar
Eltor
Length = 103
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 192 MTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 251
M LVPE + + A + D + + G +V + + K+ V I +IV
Sbjct: 13 MELVPERLRGE-----TATFDIEADGKVYVEKGRRVTARHIRQLEKDGVNFIEVPVEYIV 67
Query: 252 PKIAAKDWTNEIT 264
K++AKD+ NE T
Sbjct: 68 GKVSAKDYVNEAT 80
>pdb|1WR8|A Chain A, Crystal Structure Of Hypothetical Protein Ph1421 From
Pyrococcus Horikoshii.
pdb|1WR8|B Chain B, Crystal Structure Of Hypothetical Protein Ph1421 From
Pyrococcus Horikoshii
Length = 231
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 216 DYDCWRDTGNKVCVADVLKTFKENVEKITK 245
D D ++ G KV VA K KEN + +TK
Sbjct: 181 DLDAFKVVGYKVAVAQAPKILKENADYVTK 210
>pdb|1U4Q|A Chain A, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken
Brain Alpha Spectrin
pdb|1U4Q|B Chain B, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken
Brain Alpha Spectrin
Length = 322
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 192 MTLVPEV----VLAKEAGLLYAAVAMATDYDCWRDTGNKVCV--ADVLKTFKENVEKITK 245
MTLV LA GLL A TD+ +D N VC D++K +VE IT
Sbjct: 235 MTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITA 294
Query: 246 LFVHIVPKIA 255
+ K++
Sbjct: 295 KMKGLKGKVS 304
>pdb|1CUN|A Chain A, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
pdb|1CUN|B Chain B, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
pdb|1CUN|C Chain C, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
Length = 213
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 192 MTLVPEV----VLAKEAGLLYAAVAMATDYDCWRDTGNKVCV--ADVLKTFKENVEKIT 244
MTLV LA GLL A TD+ +D N VC D++K +VE IT
Sbjct: 126 MTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENIT 184
>pdb|3C7K|A Chain A, Molecular Architecture Of Galphao And The Structural Basis
For Rgs16-Mediated Deactivation
pdb|3C7K|C Chain C, Molecular Architecture Of Galphao And The Structural Basis
For Rgs16-Mediated Deactivation
Length = 333
Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 117 IQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKEL 155
IQT F+ SPN ++ M A D + Q++ D++ ++
Sbjct: 283 IQTQFESKNRSPNKEIYCHMTCATDTNNIQVVFDAVTDI 321
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,923,862
Number of Sequences: 62578
Number of extensions: 317843
Number of successful extensions: 819
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 767
Number of HSP's gapped (non-prelim): 38
length of query: 283
length of database: 14,973,337
effective HSP length: 98
effective length of query: 185
effective length of database: 8,840,693
effective search space: 1635528205
effective search space used: 1635528205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)