Query psy17032
Match_columns 283
No_of_seqs 179 out of 1186
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 20:06:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17032.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17032hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ozb_A Methylthioadenosine pho 100.0 3.7E-64 1.3E-68 452.2 29.4 245 4-252 14-258 (259)
2 2a8y_A 5'-methylthioadenosine 100.0 6.5E-64 2.2E-68 453.8 30.6 262 3-275 5-270 (270)
3 1wta_A 5'-methylthioadenosine 100.0 3.4E-63 1.2E-67 450.2 30.3 260 5-275 11-275 (275)
4 3fuc_A Purine nucleoside phosp 100.0 3.1E-61 1.1E-65 437.8 26.7 247 4-255 23-283 (284)
5 3odg_A Xanthosine phosphorylas 100.0 1.3E-60 4.5E-65 434.1 30.1 245 3-254 31-284 (287)
6 3khs_A Purine nucleoside phosp 100.0 1.4E-60 4.7E-65 434.0 25.3 248 4-257 20-282 (285)
7 3phb_E Purine nucleoside phosp 100.0 2.1E-60 7.3E-65 437.8 25.6 249 4-257 58-320 (324)
8 3la8_A SMU.1229, putative puri 100.0 1.9E-60 6.6E-65 433.7 23.8 239 4-254 54-303 (303)
9 1cb0_A Protein (5'-deoxy-5'-me 100.0 5.4E-58 1.8E-62 417.8 33.2 272 5-277 9-281 (283)
10 1vmk_A Purine nucleoside phosp 100.0 1.3E-57 4.4E-62 412.7 25.4 235 5-254 31-277 (277)
11 1g2o_A Purine nucleoside phosp 100.0 2.6E-57 9.1E-62 409.5 26.2 232 5-254 27-268 (268)
12 2p4s_A Purine nucleoside phosp 100.0 3E-57 1E-61 423.1 27.3 246 5-256 109-369 (373)
13 1tcv_A Purine-nucleoside phosp 100.0 3.6E-57 1.2E-61 412.3 24.8 241 5-256 26-286 (287)
14 1qe5_A Pentosyltransferase; en 100.0 2.5E-56 8.4E-61 402.8 23.9 228 5-253 29-266 (266)
15 3nm6_B MTA/SAH nucleosidase; h 100.0 4.6E-39 1.6E-43 283.5 21.3 225 6-254 2-230 (230)
16 3o4v_A MTA/SAH nucleosidase; m 100.0 8.8E-39 3E-43 282.5 22.4 226 5-256 2-233 (234)
17 3dp9_A MTA/SAH nucleosidase; v 100.0 1.1E-38 3.7E-43 281.5 21.8 226 6-255 1-231 (231)
18 3eei_A 5-methylthioadenosine n 100.0 1.8E-38 6.2E-43 280.4 21.0 226 5-254 3-233 (233)
19 4g41_A MTA/SAH nucleosidase; m 100.0 8.8E-38 3E-42 276.3 24.1 229 3-255 3-235 (236)
20 1zos_A 5'-methylthioadenosine 100.0 1.2E-36 4E-41 267.7 22.0 225 6-254 1-229 (230)
21 3bl6_A 5'-methylthioadenosine 100.0 9.4E-37 3.2E-41 268.3 21.2 223 6-254 2-230 (230)
22 3bsf_A AT4G34840, nucleosidase 100.0 9.4E-37 3.2E-41 273.3 16.1 228 5-257 13-249 (254)
23 2h8g_A 5'-methylthioadenosine 100.0 4E-36 1.4E-40 271.3 18.7 229 5-258 26-263 (267)
24 2b94_A Purine nucleoside phosp 100.0 7.3E-35 2.5E-39 263.0 15.9 219 6-255 39-264 (267)
25 1odk_A Purine nucleoside phosp 100.0 6.2E-34 2.1E-38 251.9 19.6 209 6-239 14-224 (235)
26 1je0_A MTAP;, 5'-methylthioade 100.0 7E-34 2.4E-38 251.5 18.3 218 6-251 14-234 (236)
27 3ddo_A Urdpase, upase, uridine 100.0 9E-33 3.1E-37 247.6 18.2 188 6-218 19-223 (253)
28 1z34_A Purine nucleoside phosp 100.0 3.2E-32 1.1E-36 240.8 20.7 207 6-239 13-224 (235)
29 1vhw_A Purine nucleoside phosp 100.0 1.3E-31 4.3E-36 240.0 21.2 217 7-254 17-238 (253)
30 3uaw_A PNP, purine nucleoside 100.0 2.5E-31 8.6E-36 235.6 19.8 174 38-235 44-220 (235)
31 3qpb_A Uridine phosphorylase; 100.0 2.2E-31 7.4E-36 242.1 18.9 191 7-220 46-249 (282)
32 3phc_A Purine nucleoside phosp 100.0 6.8E-32 2.3E-36 244.5 14.6 240 7-278 18-262 (275)
33 3u40_A Pnpase, purine nucleosi 100.0 8.3E-31 2.8E-35 233.4 19.5 204 7-237 23-231 (242)
34 1ybf_A AMP nucleosidase; struc 100.0 1.6E-31 5.6E-36 241.2 13.9 224 6-258 26-250 (268)
35 3mb8_A Purine nucleoside phosp 100.0 1.5E-30 5.3E-35 236.0 17.6 240 7-278 22-266 (279)
36 1t8s_A AMP nucleosidase; alpha 100.0 3.7E-29 1.3E-33 240.9 16.9 203 31-258 252-467 (484)
37 3euf_A Uridine phosphorylase 1 99.9 2.2E-26 7.5E-31 212.8 13.9 191 40-254 107-324 (328)
38 3p0f_A Uridine phosphorylase 2 99.9 3E-26 1E-30 209.5 11.8 190 40-253 78-294 (297)
39 3bje_A Nucleoside phosphorylas 99.9 1.9E-24 6.6E-29 201.4 17.9 195 39-251 76-346 (349)
40 2vpu_A TET3, 354AA long hypoth 56.0 53 0.0018 29.7 9.1 90 135-258 262-351 (354)
41 3m9w_A D-xylose-binding peripl 54.6 41 0.0014 28.6 7.9 73 134-213 10-91 (313)
42 3kl9_A PEPA, glutamyl aminopep 54.3 33 0.0011 31.0 7.5 86 136-257 262-347 (355)
43 3tb6_A Arabinose metabolism tr 50.4 55 0.0019 27.3 7.9 74 134-212 23-106 (298)
44 3cpx_A Aminopeptidase, M42 fam 48.8 40 0.0014 29.8 6.9 83 137-254 239-321 (321)
45 3l6u_A ABC-type sugar transpor 43.3 48 0.0017 27.7 6.4 74 134-212 16-96 (293)
46 1vho_A Endoglucanase; structur 42.7 86 0.0029 27.5 8.2 86 137-256 251-336 (346)
47 2f9y_B Acetyl-coenzyme A carbo 40.2 33 0.0011 30.5 4.9 51 43-93 112-165 (304)
48 4hjf_A Ggdef family protein; s 38.3 37 0.0013 30.3 5.1 41 141-190 267-307 (340)
49 3tlq_A Regulatory protein YDIV 37.7 32 0.0011 28.9 4.3 42 140-190 182-223 (242)
50 3rot_A ABC sugar transporter, 37.2 1.1E+02 0.0039 25.6 7.9 72 136-213 13-94 (297)
51 2p90_A Hypothetical protein CG 37.2 73 0.0025 28.4 6.8 60 38-102 90-152 (319)
52 3l49_A ABC sugar (ribose) tran 35.9 67 0.0023 26.7 6.1 73 135-212 14-93 (291)
53 3uug_A Multiple sugar-binding 35.8 89 0.0031 26.5 7.1 72 135-213 12-92 (330)
54 3o74_A Fructose transport syst 34.5 74 0.0025 26.1 6.1 73 135-212 11-89 (272)
55 3ksm_A ABC-type sugar transpor 33.8 1.2E+02 0.0042 24.7 7.4 72 135-212 9-91 (276)
56 2wzn_A TET3, 354AA long hypoth 33.4 65 0.0022 27.0 5.6 47 203-259 306-352 (354)
57 1ylo_A Hypothetical protein SF 32.7 1E+02 0.0036 26.9 7.1 85 136-255 253-337 (348)
58 4fey_A Phosphoglycerate kinase 32.5 1E+02 0.0035 28.5 6.9 66 47-114 53-120 (395)
59 1zmr_A Phosphoglycerate kinase 32.3 1.3E+02 0.0046 27.6 7.7 63 47-112 50-115 (387)
60 1y0y_A FRV operon protein FRVX 30.8 1.9E+02 0.0066 25.3 8.6 85 137-256 266-350 (353)
61 2r6o_A Putative diguanylate cy 30.6 62 0.0021 28.2 5.1 39 142-189 219-257 (294)
62 2ioy_A Periplasmic sugar-bindi 30.0 1.1E+02 0.0036 25.5 6.4 69 137-212 12-89 (283)
63 2lpm_A Two-component response 29.5 51 0.0017 24.9 3.8 67 141-217 17-91 (123)
64 1tvm_A PTS system, galactitol- 29.4 1.3E+02 0.0044 22.2 6.1 58 49-111 22-80 (113)
65 3isx_A Endoglucanase; TM1050, 28.6 2.7E+02 0.0092 24.8 9.1 73 135-234 260-332 (343)
66 8abp_A L-arabinose-binding pro 28.4 70 0.0024 26.9 5.0 70 135-212 11-89 (306)
67 3jy6_A Transcriptional regulat 28.3 95 0.0032 25.7 5.8 74 134-212 15-92 (276)
68 3s83_A Ggdef family protein; s 27.6 91 0.0031 26.1 5.5 37 144-189 197-233 (259)
69 3h5o_A Transcriptional regulat 27.1 2.2E+02 0.0075 24.3 8.2 72 136-212 72-148 (339)
70 3g1w_A Sugar ABC transporter; 27.0 1.5E+02 0.0051 24.8 6.9 71 136-212 14-93 (305)
71 3kzp_A LMO0111 protein, putati 26.9 87 0.003 25.6 5.2 39 142-189 185-223 (235)
72 3kke_A LACI family transcripti 26.8 1.7E+02 0.0058 24.6 7.2 71 134-212 23-101 (303)
73 4f3h_A Fimxeal, putative uncha 26.3 79 0.0027 26.3 4.9 42 140-190 197-238 (250)
74 3ojc_A Putative aspartate/glut 25.6 26 0.0009 29.6 1.6 16 73-88 68-83 (231)
75 3bbl_A Regulatory protein of L 25.4 2.7E+02 0.0092 23.0 8.2 71 137-212 19-94 (287)
76 2wam_A RV2714, conserved hypot 25.4 1.1E+02 0.0039 27.6 6.0 60 38-102 130-192 (351)
77 4h41_A Putative alpha-L-fucosi 25.0 48 0.0016 30.0 3.3 30 141-173 98-127 (340)
78 3dbi_A Sugar-binding transcrip 24.8 1.8E+02 0.0061 24.9 7.1 70 138-212 75-150 (338)
79 3sy8_A ROCR; TIM barrel phosph 24.5 88 0.003 28.1 5.2 41 140-189 330-370 (400)
80 1tjy_A Sugar transport protein 23.7 1.7E+02 0.0057 24.9 6.6 68 138-212 15-92 (316)
81 1to3_A Putative aldolase YIHT; 23.4 1.8E+02 0.0062 25.5 6.8 66 143-211 142-227 (304)
82 1jfl_A Aspartate racemase; alp 22.7 32 0.0011 28.6 1.6 17 73-89 66-82 (228)
83 2fep_A Catabolite control prot 22.7 2.1E+02 0.007 23.8 6.9 73 133-212 23-102 (289)
84 3e61_A Putative transcriptiona 22.3 1.6E+02 0.0055 24.1 6.1 73 134-211 16-92 (277)
85 3gv0_A Transcriptional regulat 21.7 2E+02 0.0068 23.8 6.6 69 139-212 23-96 (288)
86 3e35_A Uncharacterized protein 21.3 1.4E+02 0.0048 26.7 5.6 58 38-100 93-153 (325)
87 3k4h_A Putative transcriptiona 21.1 1.4E+02 0.0049 24.6 5.6 70 136-212 23-99 (292)
88 3o1n_A 3-dehydroquinate dehydr 20.8 2E+02 0.0069 24.9 6.5 77 132-213 135-229 (276)
89 3gfz_A Klebsiella pneumoniae B 20.6 1.1E+02 0.0039 27.9 5.1 41 141-190 346-386 (413)
90 2fn9_A Ribose ABC transporter, 20.2 2.3E+02 0.0077 23.3 6.6 69 137-212 13-90 (290)
91 2equ_A PHD finger protein 20-l 20.2 60 0.002 22.6 2.3 19 89-107 1-19 (74)
92 3pjx_A Cyclic dimeric GMP bind 20.1 1.4E+02 0.0048 27.0 5.6 41 141-190 378-418 (430)
93 3kjx_A Transcriptional regulat 20.1 2.3E+02 0.0078 24.3 6.8 72 136-212 78-154 (344)
No 1
>3ozb_A Methylthioadenosine phosphorylase; 5'-methylthioinosine,phosphorylase, transferase; HET: HPA; 2.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.7e-64 Score=452.23 Aligned_cols=245 Identities=32% Similarity=0.588 Sum_probs=225.0
Q ss_pred CCceEEEEeCCCCCCcccccccceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCC
Q psy17032 4 SKIKIGFIGGSGLNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCT 83 (283)
Q Consensus 4 ~~~~igIIggsgl~~~~~l~~~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~ 83 (283)
.+|+|||||||||+++..+++..+..++||||.++++|++|+++|++|++++|||++|.|+|++|||++|+|+|+.|||+
T Consensus 14 ~~p~igiI~GSGl~~l~~~~~~~~~~~~tpyg~~s~~l~~G~l~G~~Vv~l~rhG~gh~~~~~~V~~~a~i~~l~~~Gv~ 93 (259)
T 3ozb_A 14 GMSVYAIIGGTGLTQLEGLTLSESLPIETPYGAPSAPLQRGRYAGREVLFLARHGHPHRFPPHQVNYRANLWALKQAGAE 93 (259)
T ss_dssp -CCCEEEEECTTSTTCTTCCCCCCBCCCBTTBCCSSCBEEEEETTEEEEEEESSCC---CCGGGSCHHHHHHHHHHHTCS
T ss_pred CCCCEEEEccCCcchhhhcccccceeEEccCCCCcceEEEEEECCEEEEEEeCcCCCcccChhhcchHHHHHHHHHcCCC
Confidence 36899999999999986566666778999999989999999999999999988999999999999999999999999999
Q ss_pred EEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeee
Q psy17032 84 HVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKG 163 (283)
Q Consensus 84 ~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G 163 (283)
.||++|+||||+|++++||+||++|++|+++.++.|+++++. ++++|++++++||++|++.++++|+++|++++.+|
T Consensus 94 ~II~tgaaGgl~~~l~~GDlVi~~d~i~~~~~~~~t~~~~~~---~~~~~~~~~~~~d~~L~~~~~~~a~~~gi~~~~~G 170 (259)
T 3ozb_A 94 AVIAVNAVGGIHAAMGTGHLCVPHQLIDYTSGREHTYFAGDI---EHVTHIDFSHPYDEPLRQRLIEALRALGLAHSSHG 170 (259)
T ss_dssp EEEEEEEEEECSTTSCTTCEECCSEEEECCCSSCCCSSSSSC---SSCCCCCCSSCSCHHHHHHHHHHHHHTTCCEESCC
T ss_pred EEEEccceeecccccCCCCEEEehhhcccCCCCCCcCCCCcc---cCCCcCccCCCCCHHHHHHHHHHHHHcCCCeEeee
Confidence 999999999999999999999999999999988888886542 47889999999999999999999999999954499
Q ss_pred eEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHHHH
Q psy17032 164 TAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKI 243 (283)
Q Consensus 164 ~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~~~ 243 (283)
+|++++||+|+|++|+++|+++|+|+||||++||+++|+++|+||++||+|||+++|.. +++++|+||++.++++++++
T Consensus 171 vy~~~~Gp~fet~aE~~~~~~~GadaVgMe~~~ea~vA~~~gi~~~~I~~ISD~a~~~~-~~~~s~eev~~~a~~~~~~~ 249 (259)
T 3ozb_A 171 VYACTQGPRLETVAEIARLERDGNDIVGMTGMPEAALARELDLPYACLALVVNPAAGKS-AGIITMAEIEQALHDGIGKV 249 (259)
T ss_dssp EEEECCCSSCCCHHHHHHHHHTTCSEEESSSTTHHHHHHHTTCCEEEEEEEEEECTTTS-SSCCCHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCccCCHHHHHHHHHcCCEEEcCcHHHHHHHHHHcCCCeEEEEEEEeCCCCcC-CCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998864 46799999999999999999
Q ss_pred HHHHHHHHH
Q psy17032 244 TKLFVHIVP 252 (283)
Q Consensus 244 ~~ll~~~l~ 252 (283)
.+|+.++|+
T Consensus 250 ~~l~~~~i~ 258 (259)
T 3ozb_A 250 REVLARVLA 258 (259)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999998875
No 2
>2a8y_A 5'-methylthioadenosine phosphorylase (MTAP); alpha/beta, beta sheet, beta barrel, transferase; HET: MTA; 1.45A {Sulfolobus solfataricus} PDB: 3t94_A* 1v4n_A
Probab=100.00 E-value=6.5e-64 Score=453.80 Aligned_cols=262 Identities=46% Similarity=0.744 Sum_probs=236.6
Q ss_pred CCCceEEEEeCCCCCCcccccccceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCC
Q psy17032 3 VSKIKIGFIGGSGLNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGC 82 (283)
Q Consensus 3 ~~~~~igIIggsgl~~~~~l~~~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv 82 (283)
+.+|+||||||||+++++.|.+..+...++|||.|+++|++|+|+|++|++++|||++|.|+|++|||++++|+|+.+||
T Consensus 5 ~~~p~igIIggsgl~e~~~l~~~~~~~~~~~~g~p~~~~~~G~~~G~~V~~~~r~G~gh~~~~~~v~~~a~~~~l~~~Gv 84 (270)
T 2a8y_A 5 NEKASIGIIGGSGLYDPGIFSESKEIKVYTPYGQPSDFITIGKIGNKSVAFLPRHGRGHRIPPHKINYRANIWALKELGV 84 (270)
T ss_dssp CCCCSEEEEECTTCSSCSCCSSEEEECCCCTTCCCSSCEEEEEETTEEEEEEETTTGGGCCCGGGCCHHHHHHHHHHTTC
T ss_pred cCCCCEEEEecCchhHHHHHHhhheeeeEEEecCCcceEEEEEECCEEEEEEECCCCCCCcCchhhhhHHHHHHHHHcCC
Confidence 35799999999999888777777888899999987789999999999999998899999999999999999999999999
Q ss_pred CEEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEee
Q psy17032 83 THVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDK 162 (283)
Q Consensus 83 ~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~ 162 (283)
+.||++|+||||++++++||+||++|++|++++++.+++++. +++|++++++||++|++.+.++++++|+++|.+
T Consensus 85 ~~iI~~gaaG~l~~~l~~GDlVi~~~~i~~~~~~~~~~~~~~-----g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~ 159 (270)
T 2a8y_A 85 RWVISVSAVGSLRMDYKLGDFVIPDQFIDMTKNREYSFFDGP-----VVAHVSMADPFCNSLRKLAIETAKELNIKTHES 159 (270)
T ss_dssp CEEEEEEEEEESSTTSCTTCEECCCEEEEECCSCCCCSCCSS-----SCBCCCCSSCSCHHHHHHHHHHHHHHTCCEESC
T ss_pred CEEEEeeeeeccCCCCCCCCEEEEhHHhhccCCCCCcccCCC-----CCccCCCCcccCHHHHHHHHHHHHHcCCeEEcc
Confidence 999999999999999999999999999999998877776432 567889999999999999999999999999878
Q ss_pred eeEEEecCCcccCHHHHHHHH-HcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHH
Q psy17032 163 GTAVCIEGPRFSSRAESNLFR-SWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVE 241 (283)
Q Consensus 163 G~~~~~~Gp~fet~aE~~~~~-~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~ 241 (283)
|+|++++||+|+|++|+++|+ +||+|+||||++||+++|+++|+||++|++|||++++. +++++|+||++.+++++.
T Consensus 160 Gv~~~~~Gp~fet~ae~~~~~~~~GadaV~Me~a~ea~vA~~~gi~~~~i~~Vsd~a~~~--~~~~~~ee~~~~~~~~~~ 237 (270)
T 2a8y_A 160 GTYICIEGPRFSTRAESRTWREVYKADIIGMTLVPEVNLACEAQMCYATIAMVTDYDVFA--EIPVTAEEVTRVMAENTE 237 (270)
T ss_dssp CEEEEECCSSCCCHHHHHHHHHTTCCCEEESSHHHHHHHHHHTTCEEEEEEEEEECTTSS--SSCCCHHHHHHHHHHTHH
T ss_pred eEEEEecCCEecCHHHHHHHHHHcCCEEECCcHHHHHHHHHHCCCCEEEEEEEEecCCCC--CCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999 89999999999999999999999999999999999774 467999999999999999
Q ss_pred HHHHHHHHHHHhcccc-CChhHHHHHHh--hhhhcCc
Q psy17032 242 KITKLFVHIVPKIAAK-DWTNEITELKS--VVETSNM 275 (283)
Q Consensus 242 ~~~~ll~~~l~~l~~~-~~~~~~~~~~~--~~~~~~~ 275 (283)
++.+|+.++|++|.++ +.| +|++ +++.+++
T Consensus 238 ~~~~lv~~~i~~l~~~~~~~----~~~~~~~~~~~~~ 270 (270)
T 2a8y_A 238 KAKKLLYALIQKLPEKPEEG----SCSCCNSLKTALV 270 (270)
T ss_dssp HHHHHHHHHHHHCCSCC-----------CCCCGGGBC
T ss_pred HHHHHHHHHHHhhhhccCCC----CCcchhhhhhccC
Confidence 9999999999999866 789 9999 9987653
No 3
>1wta_A 5'-methylthioadenosine phosphorylase; A/B structure, transferase; HET: ADE; 1.78A {Aeropyrum pernix}
Probab=100.00 E-value=3.4e-63 Score=450.17 Aligned_cols=260 Identities=46% Similarity=0.836 Sum_probs=242.1
Q ss_pred CceEEEEeCCCCCCcccccccceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCCE
Q psy17032 5 KIKIGFIGGSGLNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCTH 84 (283)
Q Consensus 5 ~~~igIIggsgl~~~~~l~~~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~~ 84 (283)
+|+||||||||+++++.|.+..+...++|||.++++||+|+|+|++|++++|||++|.|+|++|||++++|+|+.+||+.
T Consensus 11 ~~~igIIggsgl~e~~~l~~~~~~~~~~~~g~~~~~~~~G~~~G~~V~v~~r~G~gh~~~~~~v~~~a~~~~l~~~Gv~~ 90 (275)
T 1wta_A 11 RAHVGVIGGSGLYDPGIVENPVEVKVSTPYGNPSDFIVVGDVAGVKVAFLPRHGRGHRIPPHAINYRANIWALKALGVKW 90 (275)
T ss_dssp CCSEEEEECGGGCCTTTCEEEEEEEECCTTCCCSSCEEEEEETTEEEEEEETTTTTTCSCGGGCCHHHHHHHHHHHTCCE
T ss_pred CCCEEEEecCChhhhhhhhhhceeeeEEecCCCcceEEEEEECCEEEEEEECCCCCCccChhhhhHHHHHHHHHHcCCCE
Confidence 68999999999988877777888899999998778999999999999999889999999999999999999999999999
Q ss_pred EEEecccccCCCCCCCCcEEEecccccccCC-CcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeee
Q psy17032 85 VIVSTATGSLQEEIQPGDLVILDSFIDRTRT-RIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKG 163 (283)
Q Consensus 85 iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~-~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G 163 (283)
||++|+||||++++++||+||++|+++++++ ++.+++++. +++|++++++||++|++.+.++++++|+++|.+|
T Consensus 91 iI~~gaaG~l~~~l~~GDlVi~~~~i~~~~~~~~~~~~~~~-----g~~~~~~~~~~d~~L~~~l~~~a~~~g~~~~~~G 165 (275)
T 1wta_A 91 VISVSAVGSLREDYRPGDFVVPDQFIDMTKNRRHYTFYDGP-----VTVHVSMADPFCEDLRQRLIDSGRRLGYTVHERG 165 (275)
T ss_dssp EEEEEEEEESSTTSCTTCEECCCEEEEECCCCSCSCSCCSS-----SCBCCCCSSCSCHHHHHHHHHHHHHHTCCEESCC
T ss_pred EEEecceeccCCCCCCCCEEEEhHHhhhcCCCCccccCCCC-----CcccCCCCcccCHHHHHHHHHHHHHcCCceecce
Confidence 9999999999999999999999999999998 777777532 5678899999999999999999999999998889
Q ss_pred eEEEecCCcccCHHHHHHHH-HcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHHH
Q psy17032 164 TAVCIEGPRFSSRAESNLFR-SWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEK 242 (283)
Q Consensus 164 ~~~~~~Gp~fet~aE~~~~~-~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~~ 242 (283)
+|++++||+|+|++|+++|+ +||+|+||||++||+++|+++|+||++|++|||++++. .++++|+||++.+++++.+
T Consensus 166 v~~~~~Gp~f~t~ae~~~~~~~~GadaV~Me~a~ea~vA~~~gi~~~~i~~Vsd~a~~~--~~~~~~~e~~~~~~~~~~~ 243 (275)
T 1wta_A 166 TYVCIEGPRFSTRAESRVWKDVFKADIIGMTLVPEINLACEAQLCYATLAMVTDYDVWA--DRPVTAEEVERVMISNVER 243 (275)
T ss_dssp EEEEECCSSCCCHHHHHHHHHTSCCSEEESSHHHHHHHHHHTTCEEEEEEEEEECTTSS--SSCCCHHHHHHHHHHHHHH
T ss_pred EEEEecCCEecCHHHHHHHHHHcCCEEEcccHHHHHHHHHHCCCCEEEEEEEEccCCCC--CCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999 89999999999999999999999999999999999774 2689999999999999999
Q ss_pred HHHHHHHHHHhcccc-CChhHHHHHHh--hhhhcCc
Q psy17032 243 ITKLFVHIVPKIAAK-DWTNEITELKS--VVETSNM 275 (283)
Q Consensus 243 ~~~ll~~~l~~l~~~-~~~~~~~~~~~--~~~~~~~ 275 (283)
+.+|+.++|++|.++ +.| +|++ +++.+.+
T Consensus 244 ~~~lv~~~i~~l~~~~~~~----~~~~~~~~~~~~~ 275 (275)
T 1wta_A 244 ARRMLYDVIPKLAGEPELE----RCSCCRALDTAAI 275 (275)
T ss_dssp HHHHHHHHGGGCSSCCCGG----GCTTTTGGGTTBC
T ss_pred HHHHHHHHHHhhhhhcCCC----CccchhHHhhccC
Confidence 999999999999866 789 9999 9997653
No 4
>3fuc_A Purine nucleoside phosphorylase; recombinant, glycosyltransferase, transferase, 9-deazaguanine, multisubstrate analogue inhibitors, nucleoside-binding; HET: 9D9 9DG; 1.45A {Bos taurus} SCOP: c.56.2.1 PDB: 1b8n_A* 1b8o_A* 2ai2_A* 1v48_A* 2ai1_A* 2ai3_A* 1lvu_A* 1lv8_A* 1a9o_A 1a9p_A* 1a9s_A* 1fxu_A* 2qpl_A* 1a9t_A* 3pnp_A 1pbn_A 4pnp_A 1a9q_A* 1a9r_A* 1vfn_A* ...
Probab=100.00 E-value=3.1e-61 Score=437.83 Aligned_cols=247 Identities=26% Similarity=0.424 Sum_probs=225.6
Q ss_pred CCceEEEEeCCCCCCc-ccccccceeeeeCCCCCC-------cccEEEEEECCeEEEEEeccCCCccc---CCCccchHH
Q psy17032 4 SKIKIGFIGGSGLNNP-QILENAQEVAVDTPYGAP-------SDVLLQGTIQGVDCVILARHGRKHTI---NPSNVNYRA 72 (283)
Q Consensus 4 ~~~~igIIggsgl~~~-~~l~~~~~~~~~~~~G~~-------~~~~~~G~~~G~~Vv~~~r~G~g~~~---~~~~V~~~a 72 (283)
.+|+|||||||||+++ +.+++..++++++++||| +++|++|+|+|++|+++ +|++|.| ++++|||+
T Consensus 23 ~~p~igiI~GSGl~~l~~~~~~~~~~~y~~ipgfp~stv~gh~g~l~~G~l~G~~Vv~~--~Gr~H~yeg~~~~~v~~~- 99 (284)
T 3fuc_A 23 QRPQVAVICGSGLGGLVNKLTQAQTFDYSEIPNFPESTVPGHAGRLVFGILNGRACVMM--QGRFHMYEGYPFWKVTFP- 99 (284)
T ss_dssp CCCSEEEEECTTCGGGGGGCEEEEEEEGGGSTTCC--------CEEEEEEETTEEEEEE--ESCCCGGGTCCHHHHTHH-
T ss_pred CCCcEEEEecCchhHhhhhccCcEEEeccCCCCCCCCCccCCcccEEEEEECCEEEEEE--eCCccccCCCChHHHHHH-
Confidence 4689999999999998 888888889999999997 57899999999999999 7999988 58889988
Q ss_pred HHHHHHHcCCCEEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHH
Q psy17032 73 NIWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSL 152 (283)
Q Consensus 73 ~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a 152 (283)
+++|+.|||+.||+||+|||||++++|||+||++|+||+++.++.+++.+.+.+.+|++|++++++||++|++.++++|
T Consensus 100 -~~~l~~lGv~~iI~tgaaGgl~~~~~~GDlVi~~d~i~~t~~~~~~~~~g~~~~~~g~~~~~~~~~~d~~L~~~~~~~a 178 (284)
T 3fuc_A 100 -VRVFRLLGVETLVVTNAAGGLNPNFEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTW 178 (284)
T ss_dssp -HHHHHHHTCCEEEEEEEEEECSTTCCTTCEEEEEEEEEHHHHTTCCTTCSSCCTTTCCSSCCCTTCSCHHHHHHHHHHH
T ss_pred -HHHHHHcCCCEEEEecceecCCCCCCCCCEEEehHHhcccCCcCCCCCcCccccccCCCcCCCCcCCCHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999998533445566666555788999999999999999999999
Q ss_pred HHcCCc--EEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCc-CCCCccCH
Q psy17032 153 KELGFK--FHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWR-DTGNKVCV 229 (283)
Q Consensus 153 ~~~g~~--~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~-~~~~~~~~ 229 (283)
+++|++ ++ +|+|++++||+|+|+||+++||+||+|+||||++||+++|+++|+||++|++|||+++|. .++++++|
T Consensus 179 ~~~gi~~~~~-~Gvy~~~~Gp~feT~AE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~I~~VTd~a~~~~~~~~~~s~ 257 (284)
T 3fuc_A 179 KQMGEQRELQ-EGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESQGKANH 257 (284)
T ss_dssp HHHTCSSCCE-EEEEEECCCSSCCCHHHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCSSCCCCCCH
T ss_pred HHcCCCcceE-eeEEEEecCCEEcCHHHHHHHHHcCCcEEecCHHHHHHHHHHcCCCEEEEEEEecccccccCCCCCCCH
Confidence 999999 78 999999999999999999999999999999999999999999999999999999999862 23688999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy17032 230 ADVLKTFKENVEKITKLFVHIVPKIA 255 (283)
Q Consensus 230 ~e~~~~~~~~~~~~~~ll~~~l~~l~ 255 (283)
+||++.+++++.++.+|+.++|++|+
T Consensus 258 eev~~~~~~~~~~~~~l~~~~i~~l~ 283 (284)
T 3fuc_A 258 EEVLEAGKQAAQKLEQFVSLLMASIP 283 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999874
No 5
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A*
Probab=100.00 E-value=1.3e-60 Score=434.10 Aligned_cols=245 Identities=25% Similarity=0.368 Sum_probs=222.1
Q ss_pred CCCceEEEEeCCCCCCc-ccccccceeeeeCCCCCC-------cccEEEEEECCeEEEEEeccCCCcccCCCcc-chHHH
Q psy17032 3 VSKIKIGFIGGSGLNNP-QILENAQEVAVDTPYGAP-------SDVLLQGTIQGVDCVILARHGRKHTINPSNV-NYRAN 73 (283)
Q Consensus 3 ~~~~~igIIggsgl~~~-~~l~~~~~~~~~~~~G~~-------~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V-~~~a~ 73 (283)
..+|+|||||||||+++ +.++...+.++..++||| +++|++|+++|++|+++ .|++|.|+++.+ +++++
T Consensus 31 ~~~p~igiI~GSGl~~l~~~~~~~~~~py~~ip~fp~stv~gh~g~l~~G~l~G~~Vv~l--~Gr~H~~eg~~~~~~~a~ 108 (287)
T 3odg_A 31 GFKPQIAFILGSGLGDLVDQITNDTTISYADIPGFPVSSVHGHAGELVLGDLCGVPVMCM--KGRGHFYEGKGMSIMTNP 108 (287)
T ss_dssp TCCCSEEEEECTTTGGGGGGCEEEEEEEGGGSTTCCCCSSTTCCCEEEEEEETTEEEEEE--ESCCCGGGTTCGGGGHHH
T ss_pred CCCCCEEEEecCChhHhhhcccceEEeccccCCCCCCCccCCCCceEEEEEECCEEEEEE--ECCCcccCCCCHHHHHHH
Confidence 35799999999999886 455555555555555677 67999999999999999 499999999987 78899
Q ss_pred HHHHHHcCCCEEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHH
Q psy17032 74 IWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLK 153 (283)
Q Consensus 74 ~~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~ 153 (283)
+|+|+.|||+.||++|+||||++++++||+||++|++|+++.++++ +.+...+|++|++++++||++|++.++++|+
T Consensus 109 i~~l~~lGv~~II~tgaaGgl~~~l~~GDlVi~~d~i~~t~~~p~~---g~~~~~~G~~~~~~~~~~d~~L~~~a~~aA~ 185 (287)
T 3odg_A 109 VRTFKLMGCEFLFCTNAAGSLRPEVLPGSVVMLKDHINTMPGTPLV---GPNDDRFGPRFFSLANAYDKDLRADMAKIAQ 185 (287)
T ss_dssp HHHHHHTTCSEEEEEEEEEESSTTSCTTCEEEEEEEECCSSSCTTC---SSCCTTTCCSSCCCTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecceeccCCCCCCCCEEEehhhhhccCCCCcc---CCCccccCCCCCCCCccCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999877654 3333346889999999999999999999999
Q ss_pred HcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHH
Q psy17032 154 ELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVL 233 (283)
Q Consensus 154 ~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~ 233 (283)
++|+++| +|+|++++||+|+|++|+++|++||+|+||||++||+++|+++|+||++|++|||+++|.+ +++++|+||+
T Consensus 186 ~~gi~~~-~Gvy~~~~Gp~feT~AE~~~~r~~GadaVgMe~~pea~vA~~~gi~~~~I~~VSD~a~g~~-~~~~s~eev~ 263 (287)
T 3odg_A 186 QLDIPLT-EGVFVSYPGPCFETPAEIRMMQIIGGDVVGMSVVPEVLSAAHCGLKVIALTAITNLAEGLS-DVVLSHEQTL 263 (287)
T ss_dssp HHTCCCE-EEEEEECCCSSCCCHHHHHHHHHTTCSEEESSSHHHHHHHHHHTCEEEEEEEEEEECTTSS-SCCCCHHHHH
T ss_pred HCCCCEE-EEEEEEecCCccCCHHHHHHHHHcCCEEEeCcHHHHHHHHHHcCCCEEEEEEEEccccccC-CCCCCHHHHH
Confidence 9999999 9999999999999999999999999999999999999999999999999999999998865 5789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q psy17032 234 KTFKENVEKITKLFVHIVPKI 254 (283)
Q Consensus 234 ~~~~~~~~~~~~ll~~~l~~l 254 (283)
+.+++++.++.+|+.++|+++
T Consensus 264 ~~a~~~~~~~~~ll~~~i~~~ 284 (287)
T 3odg_A 264 KFAKVASVNFTKLIEAFLKSK 284 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987
No 6
>3khs_A Purine nucleoside phosphorylase; alpha-beta structure, mixed beta-barrel, hydrolase; 2.38A {Grouper iridovirus} SCOP: c.56.2.0
Probab=100.00 E-value=1.4e-60 Score=434.04 Aligned_cols=248 Identities=26% Similarity=0.481 Sum_probs=210.5
Q ss_pred CCceEEEEeCCCCCCc-ccccccceeeee--------CCCCCCcccEEEEEECCeEEEEEeccCCCcccC---CCccchH
Q psy17032 4 SKIKIGFIGGSGLNNP-QILENAQEVAVD--------TPYGAPSDVLLQGTIQGVDCVILARHGRKHTIN---PSNVNYR 71 (283)
Q Consensus 4 ~~~~igIIggsgl~~~-~~l~~~~~~~~~--------~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~---~~~V~~~ 71 (283)
.+|+|||||||||+++ +.+++..+++++ |++|+ +++|++|+|+|++|+++ +|++|.|+ +++|||+
T Consensus 20 ~~p~igiI~GSGl~~l~~~~~~~~~~~y~~ip~f~~~t~~Gh-~g~l~~G~l~G~~Vv~~--~GrgH~yeg~~~~~v~~~ 96 (285)
T 3khs_A 20 IRPVLGIVCGSGLGKIGDSLETSITVAYSDIPNFPVGSVKGH-AGSLIFGSVNGVSCVCM--KGRFHLYEGHTAARATFP 96 (285)
T ss_dssp SCCCEEEEECTTCGGGGGGCEEEEEEEGGGSTTCC--------CCEEEEEEETTEEEEEE--ESCCCGGGTCCHHHHTHH
T ss_pred CCCcEEEEecCchhhhhhhhcCcEEEeccccCCCCCCCCCCC-CCceEEEEECCEEEEEE--eCCCcccCCCChHHhHHH
Confidence 4789999999999998 777777777665 66664 67999999999999999 69999885 4578875
Q ss_pred HHHHHHHHcCCCEEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHH
Q psy17032 72 ANIWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDS 151 (283)
Q Consensus 72 a~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~ 151 (283)
+|+|+.+||+.||+||+||||+++++|||+||++|+||+++.++.+++.+.+...+|++|++++++||++|++.++++
T Consensus 97 --i~~l~~lGv~~iI~tgaaGgl~~~~~~GDlVi~~d~id~t~~~~~~pl~g~~~~~~g~~~~~~~~~yd~~L~~~~~~~ 174 (285)
T 3khs_A 97 --MRVFKALGVKIVVLTNAAGGLNPSYRPGDFMVVRDHINLPGLAGANPLTGPNDDTEGERFPSMTSVYDKTLRKYAISA 174 (285)
T ss_dssp --HHHHHHTTCCEEEEEEEEEECSTTCCTTCEEEEEEEEEHHHHTTCCTTCSCCCTTTSCSSCCCTTCBCHHHHHHHHHH
T ss_pred --HHHHHHcCCCEEEEecceecCCCCCCCCCEEeehheEecccccCCCCCcCccccccCCCCCCcCccCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998754455667777666678899999999999999999999
Q ss_pred HHHcCCc--EEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCc-CCCCccC
Q psy17032 152 LKELGFK--FHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWR-DTGNKVC 228 (283)
Q Consensus 152 a~~~g~~--~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~-~~~~~~~ 228 (283)
|+++|++ ++ +|+|++++||+|+|+||+++|++||+|+||||++||+++|+++|+||++|++|||+++|. .++++++
T Consensus 175 a~~~gi~~~~~-~Gvy~~~~Gp~feT~AE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~i~~VTd~a~g~~~~~~~~s 253 (285)
T 3khs_A 175 ARELGMSYATH-EGVYCCVNGPSFETPAECKILRLMGSDAVGMSTAPETIVAKHGGMRCLAVSLISNVIASNCETPAEPT 253 (285)
T ss_dssp HHHHTCGGGEE-EEEEEECCCSSCCCHHHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCTTCC------
T ss_pred HHHcCCCccee-eEEEEEecCCEEeCHHHHHHHHHcCCcEEeccHHHHHHHHHHCCCCEEEEEEEeccccccccCCCCCC
Confidence 9999999 88 999999999999999999999999999999999999999999999999999999999874 1267899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17032 229 VADVLKTFKENVEKITKLFVHIVPKIAAK 257 (283)
Q Consensus 229 ~~e~~~~~~~~~~~~~~ll~~~l~~l~~~ 257 (283)
|+||++.+++++.++.+|+.++|++|+++
T Consensus 254 ~~ev~~~~~~~~~~~~~lv~~~i~~l~~~ 282 (285)
T 3khs_A 254 HEEVLRAGEEASARMTALVKLVIEKIRGE 282 (285)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999755
No 7
>3phb_E Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-60 Score=437.77 Aligned_cols=249 Identities=24% Similarity=0.402 Sum_probs=226.4
Q ss_pred CCceEEEEeCCCCCCc-ccccccceeeeeCCCCCC-------cccEEEEEECCeEEEEEeccCCCccc---CCCccchHH
Q psy17032 4 SKIKIGFIGGSGLNNP-QILENAQEVAVDTPYGAP-------SDVLLQGTIQGVDCVILARHGRKHTI---NPSNVNYRA 72 (283)
Q Consensus 4 ~~~~igIIggsgl~~~-~~l~~~~~~~~~~~~G~~-------~~~~~~G~~~G~~Vv~~~r~G~g~~~---~~~~V~~~a 72 (283)
.+|+|||||||||+++ +.+++..++++++++||| +++|++|+|+|++|+++ +|++|.| ++++|||+
T Consensus 58 ~~p~igiI~GSGL~~l~~~~~~~~~i~y~~ipgfp~stv~Ghsg~l~~G~l~G~~Vv~m--~Gr~H~yeG~~~~~V~~~- 134 (324)
T 3phb_E 58 HRPQVAIICGSGLGGLTDKLTQAQIFDYSEIPNFPRSTVPGHAGRLVFGFLNGRACVMM--QGRFHMYEGYPLWKVTFP- 134 (324)
T ss_dssp CCCSEEEEECTTCGGGGTTCEEEEEEEGGGSTTCCCCCSTTCCCEEEEEEETTEEEEEE--ESCCCGGGTCCHHHHTHH-
T ss_pred CCCcEEEEecCcHHHHHhhccCcEEEecccCCCCCCCCCCCCcCceEEEEECCEEEEEE--eCCccccCCCChHHHHHH-
Confidence 3689999999999998 788888888888888886 57899999999999999 6999988 57889987
Q ss_pred HHHHHHHcCCCEEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHH
Q psy17032 73 NIWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSL 152 (283)
Q Consensus 73 ~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a 152 (283)
+++|+.|||+.||+||+|||||++++|||+||++|+||+++.++.++|.+.+.+.+|++|++++++||++|++.++++|
T Consensus 135 -~~ll~~lGv~~II~tgaaGgL~~~l~~GDlVi~~d~Id~t~~~~~~pl~G~~~~~~g~~~~~m~~~yd~~Lr~~a~~aA 213 (324)
T 3phb_E 135 -VRVFHLLGVDTLVVTNAAGGLNPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTW 213 (324)
T ss_dssp -HHHHHHHTCCEEEEEEEEEECSTTCCTTCEEEEEEEEEHHHHHTCCTTCSSCCTTTCCSSCBCTTCSCHHHHHHHHHHH
T ss_pred -HHHHHHcCCCEEEEecceeecCCCCCCCCEEEEhhHccCcCCcCCCCCcCCCccccCCCcCccCCCCCHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999997433345555666555788999999999999999999999
Q ss_pred HHcCCc--EEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCc-CCCCccCH
Q psy17032 153 KELGFK--FHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWR-DTGNKVCV 229 (283)
Q Consensus 153 ~~~g~~--~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~-~~~~~~~~ 229 (283)
+++|++ ++ +|+|++++||+|+|+||+++||+||||+||||++||+++|+++|+||++|++|||+++|. .++++++|
T Consensus 214 ~~~gi~~~~~-~Gvy~~~~GP~FeT~AE~r~~r~~GadaVgMet~pEa~vAr~~gi~~~~Is~VTD~a~~~~~~~~~vs~ 292 (324)
T 3phb_E 214 KQMGEQRELQ-EGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESLEKANH 292 (324)
T ss_dssp TTSCCSSCCE-EEEEEECCCSSCCCHHHHHHHHHHTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCSSCCCCCCH
T ss_pred HHcCCCceEe-ceEEEEecCCEEeCHHHHHHHHHcCCcEEecChHHHHHHHHHCCCCEEEEEEEecccccccCCCCCCCH
Confidence 999998 77 999999999999999999999999999999999999999999999999999999999862 23689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17032 230 ADVLKTFKENVEKITKLFVHIVPKIAAK 257 (283)
Q Consensus 230 ~e~~~~~~~~~~~~~~ll~~~l~~l~~~ 257 (283)
+||++.+++++.++.+||.++|++|++.
T Consensus 293 eevl~~a~~~~~~~~~Lv~~~i~~l~~~ 320 (324)
T 3phb_E 293 EEVLAAGKQAAQKLEQFVSILMASIPLP 320 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999753
No 8
>3la8_A SMU.1229, putative purine nucleoside phosphorylase; PUNA, glycosyltransferase, transferase; 1.80A {Streptococcus mutans} PDB: 3lba_A*
Probab=100.00 E-value=1.9e-60 Score=433.73 Aligned_cols=239 Identities=25% Similarity=0.378 Sum_probs=208.8
Q ss_pred CCceEEEEeCCCCCCc-ccccccceeeeeCCCCCC-------cccEEEEEECCeEEEEEeccCCCccc---CCCccchHH
Q psy17032 4 SKIKIGFIGGSGLNNP-QILENAQEVAVDTPYGAP-------SDVLLQGTIQGVDCVILARHGRKHTI---NPSNVNYRA 72 (283)
Q Consensus 4 ~~~~igIIggsgl~~~-~~l~~~~~~~~~~~~G~~-------~~~~~~G~~~G~~Vv~~~r~G~g~~~---~~~~V~~~a 72 (283)
.+|+|||||||||+++ +.+++..++++.+++||| +++|++|+++|++|+++ .|++|.| +|++|||+
T Consensus 54 ~~p~igiI~GSGl~~l~~~~~~~~~i~y~~ip~fp~stv~Gh~g~l~~G~l~G~~Vv~~--~Gr~H~yEG~~p~~V~~~- 130 (303)
T 3la8_A 54 QKPEFGLILGSGLGELAEEIENALVLNYADIPNWGRSTVSGHAGKLIYGELAGRKVLAL--QGRFHYYEGNSMELVTFP- 130 (303)
T ss_dssp CCCSEEEECCTTCGGGGGGCEEEEEEEGGGSTTCC---------EEEEEEETTEEEEEE--C-CCCGGGC-CHHHHHHH-
T ss_pred CCCeEEEEccCcHhHHHhhccCcEEEecccCCCCCCCCCCCCcCceEEEEECCEEEEEE--ecCcccccCCCHHHHHHH-
Confidence 4789999999999998 788887777776665666 67899999999999999 5999998 77899987
Q ss_pred HHHHHHHcCCCEEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHH
Q psy17032 73 NIWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSL 152 (283)
Q Consensus 73 ~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a 152 (283)
+|+|+.|||+.||+||+||||| ++|||+||++|+||+++.++++++ +...+|++|++++++||++|++.++++|
T Consensus 131 -i~~l~~lGv~~II~t~aaGgL~--l~~GDlVi~~d~I~~t~~~pl~g~---~~~~~G~~f~~m~~~yd~~Lr~~a~~aA 204 (303)
T 3la8_A 131 -IRIMKALGCQGLIVTNAAGGIG--FGPGTLMAISDHINLTGANPLMGE---NLDDFGFRFPDMSNAYTADYREVAHQVA 204 (303)
T ss_dssp -HHHHHHHTCCEEEEEEEEEESS--SCTTEEEEEEEEEECSSCCTTCC----CCGGGCCCSCCCTTSSCHHHHHHHHHHH
T ss_pred -HHHHHHcCCCEEEEecceeccc--cCCCcEEEEhhHhhhcCCCCCcCC---cccccCCCcCCCCcccCHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999988776543 3334678999999999999999999999
Q ss_pred HHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHH
Q psy17032 153 KELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADV 232 (283)
Q Consensus 153 ~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~ 232 (283)
++++++++ +|+|++++||+|+|+||++++|+||||+||||++||+++|+++|+||++||+|||+++| . +++++|+||
T Consensus 205 ~~~gi~~~-~Gvy~~~~GP~FeT~AE~r~~r~~GadaVgMst~pEa~vAre~gi~~~~Is~ITD~a~g-~-~~~vs~eev 281 (303)
T 3la8_A 205 DKIGIKLD-EGVYIGVSGPSYETPAEIRAFKTLGADAVGMSTVPEVIVAVHSGLKVLGISAITNYAAG-F-QSELNHEEV 281 (303)
T ss_dssp HHHTCCCE-EEEEEECCCSSCCCHHHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECTT-C----------
T ss_pred HHcCCceE-EEEEEEeeCCccCCHHHHHHHHHcCCCEEeccHHHHHHHHHHcCCCEEEEEEEeecCCC-C-CCCCCHHHH
Confidence 99999999 99999999999999999999999999999999999999999999999999999999988 3 689999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc
Q psy17032 233 LKTFKENVEKITKLFVHIVPKI 254 (283)
Q Consensus 233 ~~~~~~~~~~~~~ll~~~l~~l 254 (283)
++.+++++.++.+|+.++|++|
T Consensus 282 l~~a~~~~~~~~~ll~~~i~~~ 303 (303)
T 3la8_A 282 VAVTQQIKEDFKGLVKAILVEL 303 (303)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999875
No 9
>1cb0_A Protein (5'-deoxy-5'-methylthioadenosine phosphor; methylthioadenosine phosphorylase, purine nucleoside phospho purine salvage, adenine; HET: ADE; 1.70A {Homo sapiens} SCOP: c.56.2.1 PDB: 1cg6_A* 1k27_A* 1sd1_A* 1sd2_A* 3ozc_A* 3ozd_A* 3oze_A
Probab=100.00 E-value=5.4e-58 Score=417.80 Aligned_cols=272 Identities=58% Similarity=1.015 Sum_probs=236.8
Q ss_pred CceEEEEeCCCCCCcccccccceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCCE
Q psy17032 5 KIKIGFIGGSGLNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCTH 84 (283)
Q Consensus 5 ~~~igIIggsgl~~~~~l~~~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~~ 84 (283)
+|+||||||||++.++.+.+..+..+++|||.++.++++|+|+|++|+++.|||+||.|+|+.||+++++++|+.+|++.
T Consensus 9 ~~~igII~gsg~e~~~~l~~~~~~~~~~p~g~~~~~~~~G~l~g~~V~~~~~~G~G~~~~~~~v~aa~~~~~l~~~gv~~ 88 (283)
T 1cb0_A 9 AVKIGIIGGTGLDDPEILEGRTEKYVDTPFGKPSDALILGKIKNVDCVLLARHGRQHTIMPSKVNYQANIWALKEEGCTH 88 (283)
T ss_dssp CCEEEEEECTTCCCGGGSEEEEEECCCBTTBCCSSCEEEEEETTEEEEEEETTTTTTCCCGGGCCHHHHHHHHHHTTCSE
T ss_pred CCCEEEEecCCchhhhhcccceeeeeecCCCCCCccEEEEEECCEEEEEEECCCCCcccCcccccHHHHHHHHHHcCCCE
Confidence 58899999999977666777777788999998888999999999999997689999999999999988899999999999
Q ss_pred EEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEee-e
Q psy17032 85 VIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDK-G 163 (283)
Q Consensus 85 iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~-G 163 (283)
||++|+||||++++++||+||+++++++++.++.+++.......++++|+++.++||++|++.+.++++++++++| . |
T Consensus 89 iI~~G~aG~l~~~l~~GDiVi~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~~~~~~-~gG 167 (283)
T 1cb0_A 89 VIVTTACGSLREEIQPGDIVIIDQFIDRTTMRPQSFYDGSHSCARGVCHIPMAEPFCPKTREVLIETAKKLGLRCH-SKG 167 (283)
T ss_dssp EEEEEEEEECSTTSCTTCEECCCEEEEECCSCCCCSCSSSCTTSCSEECCCCSSCSCHHHHHHHHHHHHHTTCCEE-SCC
T ss_pred EEEecceeecCCCCCCCcEEEEHHHhhCcCCCCCcccCCccccccCccCCCCcccCCHHHHHHHHHHHHHcCCceE-cce
Confidence 9999999999999999999999999999998777765422112345678889999999999999999999999999 6 8
Q ss_pred eEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHHHH
Q psy17032 164 TAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKI 243 (283)
Q Consensus 164 ~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~~~ 243 (283)
+|++++||+|+|++|.++++++|+|+||||++||+++|+++|+||++|++|||+++|.+++++++|+||++.+++++.++
T Consensus 168 ~~~~~sG~~f~t~ae~~~~~~~Ga~~V~ME~aa~a~vA~~~gi~~~~i~~VSd~a~~~~~~~~~~~~e~~~~~~~~~~~~ 247 (283)
T 1cb0_A 168 TMVTIEGPRFSSRAESFMFRTWGADVINMTTVPEVVLAKEAGICYASIAMATDYDCWKEHEEAVSVDRVLKTLKENANKA 247 (283)
T ss_dssp EEEEECCSSCCCHHHHHHHHHTTCCEEESSHHHHHHHHHHTTCEEEEEEEEEECTTC-----CCCHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCcccCHHHHHHHHHcCCeEEeCcHHHHHHHHHHcCCCEEEEEEEEccccCcCcCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999976642246799999999999999999
Q ss_pred HHHHHHHHHhccccCChhHHHHHHhhhhhcCcCC
Q psy17032 244 TKLFVHIVPKIAAKDWTNEITELKSVVETSNMSP 277 (283)
Q Consensus 244 ~~ll~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 277 (283)
.+++.++|++|.+..+.+.+...+...+++.|++
T Consensus 248 ~~lv~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 281 (283)
T 1cb0_A 248 KSLLLTTIPQIGSTEWSETLHNLKNMAQFSVLLP 281 (283)
T ss_dssp HHHHHHHHHHHTTSCCHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHHHHHccccchhHHHHHHHHHhhcccccC
Confidence 9999999999966555554444444456666654
No 10
>1vmk_A Purine nucleoside phosphorylase; TM1596, structural genomics protein structure initiative, PSI, joint center for structu genomics; HET: GUN; 2.01A {Thermotoga maritima} SCOP: c.56.2.1
Probab=100.00 E-value=1.3e-57 Score=412.73 Aligned_cols=235 Identities=25% Similarity=0.353 Sum_probs=200.3
Q ss_pred CceEEEEeCCCCCCc-ccccccceeee--------eCCCCCCcccEEEEEECCeEEEEEeccCCCccc---CCCccchHH
Q psy17032 5 KIKIGFIGGSGLNNP-QILENAQEVAV--------DTPYGAPSDVLLQGTIQGVDCVILARHGRKHTI---NPSNVNYRA 72 (283)
Q Consensus 5 ~~~igIIggsgl~~~-~~l~~~~~~~~--------~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~---~~~~V~~~a 72 (283)
+|+|||||||||+++ +.+++..++++ .|+||. +++|++|+++|++|+++ .|++|.| +|++|||
T Consensus 31 ~p~igiI~GSGl~~l~~~~~~~~~~py~~ip~f~~~t~~Gh-~~~l~~G~l~G~~Vv~~--~GrgH~yeG~~p~~V~~-- 105 (277)
T 1vmk_A 31 SPDILIILGSGFGPFIEKVEDPVIIDYKDIPHFPQPTVEGH-SGKLVFGRISDKPVMIM--AGRFHLYEGHDPATVAF-- 105 (277)
T ss_dssp CCSEEEEEC---CTTTTTCEEEEEEEGGGSTTCC---------CEEEEEEETTEEEEEE--ESCCCGGGTCCHHHHHH--
T ss_pred CCCEEEEccCchhhHhhhcccceEEecccCCCCCCCCCCCC-CceEEEEEECCEEEEEE--ecCCcccCCCCHHHHHH--
Confidence 689999999999987 57776666643 455554 47899999999999999 3999988 8889998
Q ss_pred HHHHHHHcCCCEEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHH
Q psy17032 73 NIWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSL 152 (283)
Q Consensus 73 ~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a 152 (283)
++|+|+.+||+.||++|+|||||++++|||+||++|+||+++.++++++.+. .+|++|++++.+||++|++. +|
T Consensus 106 ~i~~l~~lGv~~II~tgaaG~l~~~l~~GDlVi~~d~i~~t~~~p~~g~~~~---~~g~~~~~~~~~~d~~L~~~---~a 179 (277)
T 1vmk_A 106 PVYLAKYVGVKGVVVTNAAGAINPEFKPGEIILVRDIINFMFRNPLRGPNDE---KIGPRFPDMSSVVDPEWARK---IQ 179 (277)
T ss_dssp HHHHHHHHTCCEEEEEEEEEECSTTCCTTCEEEEEEEEECSCCCTTCSCCCT---TTCCSSCCCTTCSCHHHHHH---HH
T ss_pred HHHHHHHcCCCEEEEecceecCCCCCCCCCEEEEhHHHhhCCCCCcccCCCc---ccCcccCCCccccCHHHHHH---Hh
Confidence 5999999999999999999999999999999999999999998887766432 25678999999999999998 55
Q ss_pred HHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHH
Q psy17032 153 KELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADV 232 (283)
Q Consensus 153 ~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~ 232 (283)
++ ++++ +|+|++++||+|+|+||+++|++||||+||||++||+++|+++|+||++|++|||+++|.+ +++++|+||
T Consensus 180 ~~--i~~~-~Gvy~~~~Gp~feT~AE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~I~~ITD~a~g~~-~~~~s~eev 255 (277)
T 1vmk_A 180 ER--LSLK-EGVYIGVLGPSYETPAEIRVFEKLGADLVGMSTVPEVIAAKHCGLKVVVFSCVTNMAAGIT-HGRLSHEEV 255 (277)
T ss_dssp HH--HCCE-EEEEEECCCSSCCCHHHHHHHHHTTCSEEESSSHHHHHHHHHHTCEEEEEEEEEEECTTC------CHHHH
T ss_pred hh--CCCc-eEEEEEeeCCcccCHHHHHHHHHcCCeEEecChHHHHHHHHHCCCCEEEEEEEecCccCcC-CCCCCHHHH
Confidence 55 7788 9999999999999999999999999999999999999999999999999999999998754 578999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc
Q psy17032 233 LKTFKENVEKITKLFVHIVPKI 254 (283)
Q Consensus 233 ~~~~~~~~~~~~~ll~~~l~~l 254 (283)
++.+++++.++.+|+.++|+++
T Consensus 256 ~~~~~~~~~~~~~lv~~~i~~~ 277 (277)
T 1vmk_A 256 VRTTKMAQGKIEKALTTAVEVF 277 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999763
No 11
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=100.00 E-value=2.6e-57 Score=409.50 Aligned_cols=232 Identities=20% Similarity=0.324 Sum_probs=208.7
Q ss_pred CceEEEEeCCCCCCc-ccccccc-eeeeeCCCCCC-------cccEEEEEECCeEEEEEeccCCCcccCCCccc-hHHHH
Q psy17032 5 KIKIGFIGGSGLNNP-QILENAQ-EVAVDTPYGAP-------SDVLLQGTIQGVDCVILARHGRKHTINPSNVN-YRANI 74 (283)
Q Consensus 5 ~~~igIIggsgl~~~-~~l~~~~-~~~~~~~~G~~-------~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~-~~a~~ 74 (283)
+|+|||||||||+++ +.+++.. +.++..++||| +++|++|+++|++|+++ +|++|.|+|++++ +++++
T Consensus 27 ~~~igiI~GSGl~~~~~~~~~~~v~~py~~~p~fp~~tv~gh~~~~~~G~l~G~~V~~~--~G~gh~~~~~~v~~~~a~i 104 (268)
T 1g2o_A 27 EHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVL--AGRIHAYEGHDLRYVVHPV 104 (268)
T ss_dssp CCSEEEEECTTCGGGSGGGCCCSEEEEGGGSTTCCCCCSTTCCCEEEEEEETTEEEEEE--ECCCCGGGTCCHHHHSHHH
T ss_pred CCCEEEEcCCchhhhHHhhccceeEeecccCCCCCCCcccCCCCeEEEEEECCEEEEEE--ECCCcCCCCCCHHHHHHHH
Confidence 689999999999887 5555554 55555555666 57899999999999999 6999999999999 56899
Q ss_pred HHHHHcCCCEEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHH
Q psy17032 75 WALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKE 154 (283)
Q Consensus 75 ~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~ 154 (283)
|+|+.+||+.||++|+|||||+++++||+||++|++|+++.+ +|++ +.|++++++||++|++.+.+++++
T Consensus 105 ~~l~~lGv~~iI~tgaaG~l~~~l~~GDlVi~~d~i~~t~~~---~~~g-------~~~~~~~~~~d~~L~~~~~~~a~~ 174 (268)
T 1g2o_A 105 RAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNLTARS---PLVG-------GEFVDLTDAYSPRLRELARQSDPQ 174 (268)
T ss_dssp HHHHHTTCCEEEEEEEEEECSTTCCTTCEEEEEEEEECSSCC---SCCS-------SCCCCCTTSSCHHHHHHHHHHCTT
T ss_pred HHHHHcCCCEEEEecceecCCCCCCCCCEEEEhHHhhccCCC---cCCC-------CCCCCCCcccCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999853 4543 348889999999999999999876
Q ss_pred cCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHH
Q psy17032 155 LGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLK 234 (283)
Q Consensus 155 ~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~ 234 (283)
++ +|+|++++||+|+|++|+++|++||+|+||||++||+++|+++|+||++|++|||+++|.+ +++++|+||++
T Consensus 175 ----~~-~Gvy~~~~Gp~feT~aE~~~~~~~GadaVgMe~~~ea~lA~~~gi~~~~i~~VtD~a~g~~-~~~~s~eev~~ 248 (268)
T 1g2o_A 175 ----LA-EGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGIT-GEPLSHAEVLA 248 (268)
T ss_dssp ----CE-EEEEEECCCSSCCCHHHHHHHHHHTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECTTSS-CCCCCHHHHHH
T ss_pred ----hC-CCeEEEEeCCEEeCHHHHHHHHHcCCeEEecCHHHHHHHHHHcCCCEEEEEEEecCccccC-CCCCCHHHHHH
Confidence 66 9999999999999999999999999999999999999999999999999999999998764 57899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q psy17032 235 TFKENVEKITKLFVHIVPKI 254 (283)
Q Consensus 235 ~~~~~~~~~~~ll~~~l~~l 254 (283)
.+++++.++.+|+.++|+++
T Consensus 249 ~~~~~~~~~~~lv~~~i~~~ 268 (268)
T 1g2o_A 249 AGAASATRMGALLADVIARF 268 (268)
T ss_dssp HHHTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999875
No 12
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae}
Probab=100.00 E-value=3e-57 Score=423.12 Aligned_cols=246 Identities=21% Similarity=0.357 Sum_probs=221.2
Q ss_pred CceEEEEeCCCCCCc-ccccccceeeeeCCCCCC-------cccEEEEEECCeEEEEEeccCCCcccCCCccch-HHHHH
Q psy17032 5 KIKIGFIGGSGLNNP-QILENAQEVAVDTPYGAP-------SDVLLQGTIQGVDCVILARHGRKHTINPSNVNY-RANIW 75 (283)
Q Consensus 5 ~~~igIIggsgl~~~-~~l~~~~~~~~~~~~G~~-------~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~-~a~~~ 75 (283)
+|+|||||||||+++ +.+++..++++++++||| +++|++|+|+|++|+++ .||+|.|+++++++ ++++|
T Consensus 109 ~p~igIIgGSGL~~la~~le~~~~i~y~~ipgfp~sTv~Gh~g~l~~G~l~G~~Vvvm--~GrgH~yeg~~v~~v~a~i~ 186 (373)
T 2p4s_A 109 RPKVGIICGSGLGTLAEQLTDVDSFDYETIPHFPVSTVAGHVGRLVFGYLAGVPVMCM--QGRFHHYEGYPLAKCAMPVR 186 (373)
T ss_dssp CCSEEEEECTTCTHHHHTCEEEEEEEGGGSTTCCCCCSTTCCCEEEEEEETTEEEEEE--ESCCCGGGTCCHHHHHHHHH
T ss_pred CCcEEEECCccHhHHHhhcCeeEEEecccCCCCCCCCCCCCCceeEEEEECCEEEEEE--eCCCcCCCCCCHHHHHHHHH
Confidence 589999999999987 578888788776666663 34899999999999999 39999999999998 47999
Q ss_pred HHHHcCCCEEEEecccccCCCCCCCCcEEEecccccc---cCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHH
Q psy17032 76 ALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDR---TRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSL 152 (283)
Q Consensus 76 ~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~---~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a 152 (283)
+|+.|||+.||++|+||||+++++|||+||++|+||+ ++.++++++.. ..++++|++++++||++|++.++++|
T Consensus 187 llk~lGV~~II~tgaaGgL~~~l~pGDlVI~~d~Id~dd~t~~~pl~g~~~---~~~gv~~~~ms~~yd~~Lr~~a~~aA 263 (373)
T 2p4s_A 187 VMHLIGCTHLIATNAAGGANPKYRVGDIMLIKDHINLMGFAGNNPLQGPND---ERFGPRFFGMANTYDPKLNQQAKVIA 263 (373)
T ss_dssp HHHHHTCCEEEEEEEEEECSTTCCTTCEEEEEEEECHHHHTTCCTTCSCCC---TTTCCSCBCCTTSBCHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEeccEeecCCCCCCCCEEEEhHHhcCcCcCCCCCccccCc---cccCCCCCCCCccCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 87777665532 23577899999999999999999999
Q ss_pred HHcCC--cEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCC-CCccCH
Q psy17032 153 KELGF--KFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDT-GNKVCV 229 (283)
Q Consensus 153 ~~~g~--~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~-~~~~~~ 229 (283)
+++++ .++ +|+|++++||+|+|+||+++|++||||+||||++||+++|+++|+||++|++|||++++..+ .++++|
T Consensus 264 ~~~gi~~~~~-~Gvyv~~~GP~FeT~AE~r~lr~~GadaVgMetapEa~lAre~Gi~~~~I~~VTD~a~~~~~~~~~vs~ 342 (373)
T 2p4s_A 264 RQIGIENELR-EGVYTCLGGPNFETVAEVKMLSMLGVDAIGMSTVHEIITARHCGMTCFAFSLITNMCTMSYEEEEEHCH 342 (373)
T ss_dssp HHTTCGGGEE-EEEEEECCCSSCCCHHHHHHHHHTTCCEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCSSSCCCCCH
T ss_pred HHcCCCccee-eEEEEEeeCCcccCHHHHHHHHHcCCeEEecChHHHHHHHHHcCCCEEEEEEeecccccccccCCCCCH
Confidence 99999 588 99999999999999999999999999999999999999999999999999999999975210 168999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17032 230 ADVLKTFKENVEKITKLFVHIVPKIAA 256 (283)
Q Consensus 230 ~e~~~~~~~~~~~~~~ll~~~l~~l~~ 256 (283)
+||++.++++++++.+||.++|++|..
T Consensus 343 eEvle~~~~~~~~~~~Lv~~~I~~l~~ 369 (373)
T 2p4s_A 343 DSIVGVGKNREKTLGEFVSRIVKHIHY 369 (373)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999864
No 13
>1tcv_A Purine-nucleoside phosphorylase; transferase; HET: NDS; 1.75A {Schistosoma mansoni} PDB: 1tcu_A* 1td1_A 3djf_A* 3e0q_A* 3e9r_A* 3e9z_A* 3f8w_A* 3faz_A* 3fb1_A* 3fnq_A* 3iex_A*
Probab=100.00 E-value=3.6e-57 Score=412.30 Aligned_cols=241 Identities=27% Similarity=0.400 Sum_probs=205.2
Q ss_pred CceEEEEeCCCCCCc-ccccccceee--------eeCCCCCCcccEEEEEECCeEEEEEeccCCCccc---CCCccchHH
Q psy17032 5 KIKIGFIGGSGLNNP-QILENAQEVA--------VDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTI---NPSNVNYRA 72 (283)
Q Consensus 5 ~~~igIIggsgl~~~-~~l~~~~~~~--------~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~---~~~~V~~~a 72 (283)
+|+|||||||||+++ +.+++..+++ ..|+||+ ++++++|+++|++|+++ .|++|.| +|++|||
T Consensus 26 ~p~igiI~GSGl~~l~~~l~~~~~i~y~~ip~f~~~t~~Gh-~g~l~~G~l~G~~V~~~--~G~gH~yeG~~p~~V~~-- 100 (287)
T 1tcv_A 26 VPEIGIICGSGLGKLADGVKDKITIPYTKIPNFPQTSVVGH-SGNLIFGTLSGRKVVVM--QGRFHMYEGYSNDTVAL-- 100 (287)
T ss_dssp CCSEEEECCTTCGGGGTTCEEEEEEEGGGSTTSCCCC---C-CCEEEEEEETTEEEEEE--ESCCCGGGTCCHHHHHH--
T ss_pred CCcEEEEcCCchhhHHhhcceeEEEecccCCCCCCCCCCCC-CceEEEEEECCEEEEEE--ecCCcccCCCCHHHHHH--
Confidence 689999999999987 5677766654 4566664 47999999999999999 4999988 7888987
Q ss_pred HHHHHHHcCCCEEEEecccccCCCCCCCCcEEEecccccc---cCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHH
Q psy17032 73 NIWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDR---TRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIII 149 (283)
Q Consensus 73 ~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~---~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~ 149 (283)
++|+|+.+||+.||++|+|||||+++++||+||++|+||+ ++.++++++.+. .++++|++++++||++|++.++
T Consensus 101 ~i~~l~~lGv~~iI~tgaaG~l~~~~~~GDlVi~~d~i~~~g~t~~~~~~~~~~~---~~g~~~~~~~~~~d~~L~~~~~ 177 (287)
T 1tcv_A 101 PIRVMKLLGVKILMVSNAAGGLNRSLKLGDFVILKDHIYLPGLGLNNILVGPNQE---AFGTRFPALSNAYDRDLRKLAV 177 (287)
T ss_dssp HHHHHHHHTCCEEEEEEEEEECSTTCCTTCEEEEEEEEEHHHHTTTCTTCSSCCT---TTCCSSCCCTTSBCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEecceeecCCCCCCCCEEEEHHHhcccccCCCCCcccCCcc---ccCCCCCCCCcccCHHHHHHHH
Confidence 5999999999999999999999999999999999999999 887777766432 2467899999999999999999
Q ss_pred HHHH--HcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCC---
Q psy17032 150 DSLK--ELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTG--- 224 (283)
Q Consensus 150 ~~a~--~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~--- 224 (283)
++|+ +++++++ +|+|++++||+|+|++|+++|++||||+||||++||+++|+++|+||++|++|||+++ .+ +
T Consensus 178 ~~a~~~~~~~~~~-~Gvy~~~~Gp~feT~aE~~~~r~~Gad~VgMe~~~ea~vA~~~gi~~~~i~~Vtd~a~-~~-~~~~ 254 (287)
T 1tcv_A 178 QVAEENGFGNLVH-QGVYVMNGGPCYETPAECTMLLNMGCDVVGMSTIPEVVIARHCGIQVFAVSLVTNISV-LD-VESD 254 (287)
T ss_dssp HHHHHTTCGGGEE-EEEEEECCCSSCCCHHHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECC-CC-TTCC
T ss_pred HHHhhhcCCCcee-eEEEEEecCCccCCHHHHHHHHHcCCcEEcccHHHHHHHHHHCCCCEEEEEEeecccc-cc-ccCC
Confidence 9999 8899999 9999999999999999999999999999999999999999999999999999999987 32 4
Q ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17032 225 NKVCVADVLKTFKENVEKITKLFVHIVPKIAA 256 (283)
Q Consensus 225 ~~~~~~e~~~~~~~~~~~~~~ll~~~l~~l~~ 256 (283)
++++|+||++.+++++.++.+|+.++|++|++
T Consensus 255 ~~~~~eev~~~~~~~~~~~~~lv~~~i~~l~~ 286 (287)
T 1tcv_A 255 LKPNHEEVLATGAQRAELMQSWFEKIIEKLPK 286 (287)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 68999999999999999999999999999864
No 14
>1qe5_A Pentosyltransferase; enzyme, purine nucleoside phosphorylase; 2.20A {Cellulomonas SP} SCOP: c.56.2.1 PDB: 1c3x_A
Probab=100.00 E-value=2.5e-56 Score=402.78 Aligned_cols=228 Identities=20% Similarity=0.296 Sum_probs=206.5
Q ss_pred CceEEEEeCCCCCCc-ccccccc-eeeeeCCCCCCcccEEEEEECC-----eEEEEEeccCCCcccC---CCccchHHHH
Q psy17032 5 KIKIGFIGGSGLNNP-QILENAQ-EVAVDTPYGAPSDVLLQGTIQG-----VDCVILARHGRKHTIN---PSNVNYRANI 74 (283)
Q Consensus 5 ~~~igIIggsgl~~~-~~l~~~~-~~~~~~~~G~~~~~~~~G~~~G-----~~Vv~~~r~G~g~~~~---~~~V~~~a~~ 74 (283)
+|+|||||||||+++ +.+++.. +.++++++|||+ +|++|+++| ++|+++ +|++|.|+ +++||+ ++
T Consensus 29 ~p~igiI~GSGl~~l~~~~~~~~v~~~y~~ipg~p~-~l~~G~l~G~~~~~~~Vv~~--~Gr~h~yeg~~p~~V~a--~i 103 (266)
T 1qe5_A 29 GHDMALVLGSGWGGAAELLGEVVAEVPTHEIPGFSS-VTRSIRVERADGSVRHALVL--GSRTHLYEGKGVRAVVH--GV 103 (266)
T ss_dssp CCSEEEECCTTCTTTTTTSCEEEEEEEGGGSTTCCC-EEEEEEEECTTSCEEEEEEC--CSCCCGGGSSCHHHHSH--HH
T ss_pred CCCEEEEeCCchhhhHhhhccceEEEecCCCCCCCe-EEEEEEECCcCCCceEEEEE--ECCccccCCCCHHHHHH--HH
Confidence 689999999999987 6676665 677888889998 899999999 999999 79999885 677884 59
Q ss_pred HHHHHcCCCEEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHH
Q psy17032 75 WALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKE 154 (283)
Q Consensus 75 ~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~ 154 (283)
|+|+.+||+.||++|+|||||++++|||+||++||+|++++++ |. ++.|++|+++||++|++.+.++++
T Consensus 104 ~~l~~lGv~~iI~tgaaG~l~~~l~~GDlVi~~d~i~~t~~~~---~~-------g~~~~~~~~~~d~~L~~~~~~~a~- 172 (266)
T 1qe5_A 104 RTAAATGAETLILTNGCGGLNQEWGAGTPVLLSDHINLTARSP---LE-------GPTFVDLTDVYSPRLRELAHRVDP- 172 (266)
T ss_dssp HHHHHTTCCEEEEEEEEEECCTTSCTTCEEEEEEEEECSSCCS---CC-------SSCCCCCTTSBCHHHHHHHHHHCT-
T ss_pred HHHHHcCCCEEEEecceecCCCCCCCCCEEEEhHHhhhCCCCC---CC-------CCCCCCCCcccCHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999998644 33 344888999999999999999987
Q ss_pred cCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHH
Q psy17032 155 LGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLK 234 (283)
Q Consensus 155 ~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~ 234 (283)
.++ +|+|++++||+|+|++|+++|++||+|+||||++||+++|+++|+||++|++|||+++|.+ +++++|+||++
T Consensus 173 ---~~~-~Gvy~~~~Gp~feT~aE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~i~~Vtd~a~g~~-~~~~s~eev~~ 247 (266)
T 1qe5_A 173 ---TLP-EGVYAQFPGPHYETPAEVRMAGILGADLVGMSTTLEAIAARHCGLEVLGVSLVTNLAAGIS-PTPLSHAEVIE 247 (266)
T ss_dssp ---TCC-EEEEEECCCSSCCCHHHHHHHHHHTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECTTTC-SSCCCHHHHHH
T ss_pred ---HhC-CCeEEEeeCCEEeCHHHHHHHHHcCCeEEecChHHHHHHHHHCCCCEEEEEEEecCccccC-CCCCCHHHHHH
Confidence 466 8999999999999999999999999999999999999999999999999999999998754 57899999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy17032 235 TFKENVEKITKLFVHIVPK 253 (283)
Q Consensus 235 ~~~~~~~~~~~ll~~~l~~ 253 (283)
.+++++.++.+|+.++|++
T Consensus 248 ~~~~~~~~~~~ll~~~i~~ 266 (266)
T 1qe5_A 248 AGQAAGPRISALLADIAKR 266 (266)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 9999999999999998863
No 15
>3nm6_B MTA/SAH nucleosidase; hydrolase; HET: ADE; 1.60A {Helicobacter pylori} SCOP: c.56.2.0 PDB: 3nm5_A* 3nm4_A* 4ffs_A*
Probab=100.00 E-value=4.6e-39 Score=283.47 Aligned_cols=225 Identities=15% Similarity=0.201 Sum_probs=178.6
Q ss_pred ceEEEEeCCCCCCcccccc-cceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHH-HHHHHHHcCCC
Q psy17032 6 IKIGFIGGSGLNNPQILEN-AQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRA-NIWALKSVGCT 83 (283)
Q Consensus 6 ~~igIIggsgl~~~~~l~~-~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a-~~~~l~~~Gv~ 83 (283)
++||||+++.. |.+.+.. ..+......++ +..+|+|+++|++|+++ ++|+|+ +++++ ..++++.+|++
T Consensus 2 ~~I~Ii~A~~~-E~~~l~~~~l~~~~~~~~~--~~~~~~G~~~g~~v~v~-~~G~G~------~~aa~~~~~l~~~~~~~ 71 (230)
T 3nm6_B 2 QKIGILGAMRE-EITPILELFGVDFEEIPLG--GNVFHKGVYHNKEIIVA-YSKIGK------VHSTLTTTSMILAFGVQ 71 (230)
T ss_dssp CEEEEEESSHH-HHHHHHHHHCCCCEEEEET--TEEEEEEEETTEEEEEE-ECCSSH------HHHHHHHHHHHHHHCCS
T ss_pred cEEEEEeeCHH-HHHHHHHHhcccccEEEEC--CEEEEEEEECCEEEEEE-ECCCCH------HHHHHHHHHHHHhCCCC
Confidence 68999999652 3344433 32322222233 45899999999999999 599985 77775 45678899999
Q ss_pred EEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeee
Q psy17032 84 HVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKG 163 (283)
Q Consensus 84 ~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G 163 (283)
.||++|+|||+++++++||+||++++++++.+ .+.++.+.+ +.+.+ +..+++|++|++.+.+++++.+++++ .|
T Consensus 72 ~iI~~G~aG~l~~~~~~Gdvvi~~~~~~~d~~--~~~~g~~~g--~~p~~-~~~~~~d~~l~~~~~~~~~~~~~~~~-~G 145 (230)
T 3nm6_B 72 KVLFSGVAGSLVKDLKINDLLVATQLVQHDVD--LSAFDHPLG--FIPES-AIFIETSGSLNALAKKIANEQHIALK-EG 145 (230)
T ss_dssp EEEEEEEEEECSTTCCTTCEEEEEEEEETTCC--CGGGTCCTT--CCTTS-CSEEECCHHHHHHHHHHHHHTTCCEE-EE
T ss_pred EEEEEEeecCCCCCCccccEEEEeeEEEccCC--CcccCCCCC--CCCCC-CccccCCHHHHHHHHHHHHhcCCCEE-EE
Confidence 99999999999999999999999999998764 233322211 12222 22467899999999999999999999 89
Q ss_pred eEEEecCCcc-cCHHHHHHHH-HcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHH
Q psy17032 164 TAVCIEGPRF-SSRAESNLFR-SWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVE 241 (283)
Q Consensus 164 ~~~~~~Gp~f-et~aE~~~~~-~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~ 241 (283)
+|+ +||+| ++++|.++++ ++|+++||||+++++++|+++|+||++||+|||++++ +.+.+|+++++.+.+++
T Consensus 146 ~~~--sgd~f~~~~~~~~~l~~~~ga~~veME~aa~a~~a~~~gi~~~~ir~IsD~a~~---~~~~~~~~~~~~a~~~~- 219 (230)
T 3nm6_B 146 VIA--SGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADE---KAGMSFDEFLEKSAHTS- 219 (230)
T ss_dssp EEE--ECSSCCCCHHHHHHHHHHHCCSEEESSHHHHHHHHHHHTCCEEEEEEEEECSST---THHHHHHHHHHHHHHHH-
T ss_pred EEE--ECChhcCCHHHHHHHHHHcCCcEEeccHHHHHHHHHHcCCCEEEEEEEecCCCC---CCccCHHHHHHHHHHHH-
Confidence 984 99999 8999988775 4899999999999999999999999999999999865 46778999988877664
Q ss_pred HHHHHHHHHHHhc
Q psy17032 242 KITKLFVHIVPKI 254 (283)
Q Consensus 242 ~~~~ll~~~l~~l 254 (283)
.+++.++|++|
T Consensus 220 --~~~~~~~l~~l 230 (230)
T 3nm6_B 220 --AKFLKSMVDEL 230 (230)
T ss_dssp --HHHHHHHHTTC
T ss_pred --HHHHHHHHHhC
Confidence 46888888764
No 16
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} SCOP: c.56.2.1 PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* 4g89_A*
Probab=100.00 E-value=8.8e-39 Score=282.53 Aligned_cols=226 Identities=18% Similarity=0.231 Sum_probs=178.9
Q ss_pred CceEEEEeCCCCCCcccccccceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHH-HHHHHHcCCC
Q psy17032 5 KIKIGFIGGSGLNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRAN-IWALKSVGCT 83 (283)
Q Consensus 5 ~~~igIIggsgl~~~~~l~~~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~-~~~l~~~Gv~ 83 (283)
.|+||||+++. .|.+.+....+......++ +..+|+|+++|++|+++ ++|+|+ ++++.+ .++++.+|++
T Consensus 2 ~m~i~ii~A~~-~E~~~l~~~l~~~~~~~~~--~~~~~~G~~~g~~v~v~-~~GiG~------~~aa~~~~~li~~~~~~ 71 (234)
T 3o4v_A 2 SMKIGIIGAME-EEVTLLRDKIENRQTISLG--GCEIYTGQLNGTEVALL-KSGIGK------VAAALGATLLLEHCKPD 71 (234)
T ss_dssp CCEEEEEESSH-HHHHHHHTTCEEEEEEEET--TEEEEEEEETTEEEEEE-ECCSSH------HHHHHHHHHHHHHHCCS
T ss_pred CCEEEEEEeCH-HHHHHHHHHhccCceEeeC--CeEEEEEEECCEEEEEE-ECCCCH------HHHHHHHHHHHHhCCCC
Confidence 58999999955 2335454444443333333 45899999999999999 699985 787754 4677899999
Q ss_pred EEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccC--CCCCCCCHHHHHHHHHHHHHcCCcEEe
Q psy17032 84 HVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHI--PMEPAFDNSTRQIIIDSLKELGFKFHD 161 (283)
Q Consensus 84 ~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~--~~~~~~d~~L~~~~~~~a~~~g~~~~~ 161 (283)
.||++|+|||+++++++||+||++++++++.+ .+.++... + .++ +..+++|++|++.+.+++++++++++
T Consensus 72 ~iI~~G~aG~l~~~~~~GDvvi~~~~~~~d~~--~~~~~~~~----g-~~p~~~~~~~~d~~L~~~~~~~~~~~~~~~~- 143 (234)
T 3o4v_A 72 VIINTGSAGGLAPTLKVGDIVVSDEARYHDAD--VTAFGYEY----G-QLPGCPAGFKADDKLIAAAEACIAELNLNAV- 143 (234)
T ss_dssp EEEEEEEEEECSTTCCTTCEEEEEEEEESSCB--CGGGTCCT----T-CCTTSCSSEECCHHHHHHHHHHHHHTTCCEE-
T ss_pred EEEEEEEEeccCCCCCCCcEEEECeEEEcccC--CcccCCcc----C-cCCCCCccccCCHHHHHHHHHHHHhcCCCeE-
Confidence 99999999999999999999999999999864 23333221 1 122 23468999999999999999999999
Q ss_pred eeeEEEecCCccc-CHHHHHHHHHc--CCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHH
Q psy17032 162 KGTAVCIEGPRFS-SRAESNLFRSW--NAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKE 238 (283)
Q Consensus 162 ~G~~~~~~Gp~fe-t~aE~~~~~~~--Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~ 238 (283)
.|++ ++||+|. ++++.++|++. |+++||||+++++++|+++|+||++||+|||++++ +++.+++++++.+.+
T Consensus 144 ~G~~--~sgd~f~~~~~~~~~l~~~~~ga~~veME~aa~a~va~~~~ip~~~ir~ISD~a~~---~~~~~~~~~~~~aa~ 218 (234)
T 3o4v_A 144 RGLI--VSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQ---QSHLSFDEFLAVAAK 218 (234)
T ss_dssp EEEE--EECSBCCCSHHHHHHHHHHCTTEEEEESSHHHHHHHHHHHTCCEEEEEEEEECSST---THHHHHHHHHHHHHH
T ss_pred EeeE--EEcCeeeCCHHHHHHHHHHcCCccEeehhHHHHHHHHHHhCCCEEEEEEEecCCCC---cchhhHHHHHHHHHH
Confidence 9998 5999996 56677888764 99999999999999999999999999999999865 456677777776655
Q ss_pred HHHHHHHHHHHHHHhccc
Q psy17032 239 NVEKITKLFVHIVPKIAA 256 (283)
Q Consensus 239 ~~~~~~~ll~~~l~~l~~ 256 (283)
+ +.+++.++|++|+.
T Consensus 219 ~---~a~~v~~~l~~l~~ 233 (234)
T 3o4v_A 219 Q---SSLMVESLVQKLAH 233 (234)
T ss_dssp H---HHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHhcC
Confidence 4 55688888887753
No 17
>3dp9_A MTA/SAH nucleosidase; vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocystei nucleosidase, butylthio dadme immucillin A, MTAN, hydrolase; HET: BIG; 2.30A {Vibrio cholerae} SCOP: c.56.2.1
Probab=100.00 E-value=1.1e-38 Score=281.47 Aligned_cols=226 Identities=18% Similarity=0.233 Sum_probs=176.3
Q ss_pred ceEEEEeCCCCCCcccccccceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHH-HHHHHcCCCE
Q psy17032 6 IKIGFIGGSGLNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANI-WALKSVGCTH 84 (283)
Q Consensus 6 ~~igIIggsgl~~~~~l~~~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~-~~l~~~Gv~~ 84 (283)
|+||||+++.. |.+.+.+..+......++ +..+|+|+++|++|+++ ++|+|+ +|++.++ ++++.+|++.
T Consensus 1 m~i~Ii~A~~~-E~~~l~~~l~~~~~~~~~--~~~~~~G~~~g~~v~v~-~~GiG~------~~aa~~~~~li~~~~~~~ 70 (231)
T 3dp9_A 1 MKIGIIGAMQQ-EVAILKDLIEDVQEVNQA--GCTFYSGQIQGVDVVLL-QSGIGK------VSAALGTALLISQYAPDV 70 (231)
T ss_dssp -CEEEEESSHH-HHHHHHTTCEEEEEEEET--TEEEEEEEETTEEEEEE-ECCSSH------HHHHHHHHHHHHHHCCSE
T ss_pred CEEEEEeeCHH-HHHHHHHHhcccceeeeC--CeEEEEEEECCEEEEEE-ECCCCH------HHHHHHHHHHHHhcCCCE
Confidence 57999999652 334444433332222332 45899999999999999 699985 7877544 5778999999
Q ss_pred EEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHc-CCcEEeee
Q psy17032 85 VIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKEL-GFKFHDKG 163 (283)
Q Consensus 85 iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~-g~~~~~~G 163 (283)
||++|+|||+++++++||+||++++++++.+. +.++...+. -+ ..+..+++|++|++.+.++++++ ++++| .|
T Consensus 71 iI~~G~aG~l~~~~~~GDvvi~~~~~~~d~~~--~~~g~~~g~--~p-~~~~~~~~d~~L~~~~~~~~~~~~~~~~~-~G 144 (231)
T 3dp9_A 71 VINTGSAGGFDASLNVGDVVISSEVRHHDADV--TAFGYEIGQ--MA-GQPAAFKADEKLMTVAEQALAQLPNTHAV-RG 144 (231)
T ss_dssp EEEEEEEEECSTTCCTTCEEEEEEEEETTCBC--GGGTCCTTC--CT-TSCSSEECCHHHHHHHHHHHTTSTTCCEE-EE
T ss_pred EEEEEEeeccCCCCcCCCEEEEeeEEEccCCC--CccCCcCCc--CC-CCCceecCCHHHHHHHHHHHHhcCCCceE-EE
Confidence 99999999999999999999999999998642 334322110 01 12234789999999999999999 89999 89
Q ss_pred eEEEecCCccc-CHHHHHHHH-Hc-CCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHH
Q psy17032 164 TAVCIEGPRFS-SRAESNLFR-SW-NAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENV 240 (283)
Q Consensus 164 ~~~~~~Gp~fe-t~aE~~~~~-~~-Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~ 240 (283)
++ ++||+|. ++++.++++ ++ |+++||||+++++++|+++|+||++||+|||++++ +++.+|+++++.+.++
T Consensus 145 ~~--~sgd~f~~~~~~~~~l~~~~~g~~~veME~aa~a~~a~~~~ip~~~ir~ISD~a~~---~~~~~~~~~~~~aa~~- 218 (231)
T 3dp9_A 145 LI--CTGDAFVCTAERQQFIRQHFPSVVAVEMEASAIAQTCHQFKVPFVVVRAISDVADK---ESPLSFEEFLPLAAKS- 218 (231)
T ss_dssp EE--EECSBCCCSHHHHHHHHHHCTTEEEEESSHHHHHHHHHHHTCCEEEEEEEEECSST---THHHHHHHHHHHHHHH-
T ss_pred EE--EECCeeeCCHHHHHHHHHhcCCCcEEechHHHHHHHHHHcCCCEEEEEEEecCCCC---cccccHHHHHHHHHHH-
Confidence 98 5999996 566667765 58 99999999999999999999999999999999865 4667888887766654
Q ss_pred HHHHHHHHHHHHhcc
Q psy17032 241 EKITKLFVHIVPKIA 255 (283)
Q Consensus 241 ~~~~~ll~~~l~~l~ 255 (283)
+.+++.++|++|.
T Consensus 219 --~a~~v~~~l~~l~ 231 (231)
T 3dp9_A 219 --SSAMVLKMVELLK 231 (231)
T ss_dssp --HHHHHHHHHHTC-
T ss_pred --HHHHHHHHHHhcC
Confidence 5578999988763
No 18
>3eei_A 5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN; HET: MTM; 1.78A {Neisseria meningitidis serogroup B} SCOP: c.56.2.1
Probab=100.00 E-value=1.8e-38 Score=280.36 Aligned_cols=226 Identities=18% Similarity=0.234 Sum_probs=175.2
Q ss_pred CceEEEEeCCCCCCcccccccceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHH-HHHHHcCCC
Q psy17032 5 KIKIGFIGGSGLNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANI-WALKSVGCT 83 (283)
Q Consensus 5 ~~~igIIggsgl~~~~~l~~~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~-~~l~~~Gv~ 83 (283)
.++||||+++.. |.+.+....+......++ +.++|+|+++|++|+++ ++|+|+ ++++.++ ++++.+|++
T Consensus 3 ~~~i~ii~A~~~-E~~~l~~~l~~~~~~~~~--~~~~~~G~~~g~~v~v~-~~G~G~------~~aa~~~~~li~~~~~~ 72 (233)
T 3eei_A 3 LKTVAVIGAMEQ-EIELLREMMENVKAVSFG--RFSAYEGELAGKRMVLA-LSGIGK------VNAAVATAWIIREFAAD 72 (233)
T ss_dssp CCEEEEEESSHH-HHHHHHHHCEEEEEEEET--TEEEEEEEETTEEEEEE-ECCSSH------HHHHHHHHHHHHHHCCS
T ss_pred CCEEEEEecCHH-HHHHHHHHhcccceeeeC--CeEEEEEEECCEEEEEE-ECCCCH------HHHHHHHHHHHHhCCCC
Confidence 378999999652 334443333332222333 45899999999999999 599985 7877544 567899999
Q ss_pred EEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCc-EEee
Q psy17032 84 HVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFK-FHDK 162 (283)
Q Consensus 84 ~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~-~~~~ 162 (283)
.||++|+|||+++++++||+||++++++++.+ .+.++...+ .-+ +.+..+++|++|++.+.+++++++++ +| .
T Consensus 73 ~iI~~G~aG~l~~~~~~GDvvv~~~~~~~d~~--~~~~g~~~~--~~p-~~~~~~~~d~~l~~~~~~~~~~~~~~~~~-~ 146 (233)
T 3eei_A 73 CVINTGSAGGLGKGLKVGDVVIGTETAHHDVD--VTAFGYAWG--QVP-QLPARFASDGILIEAAKRAARTFEGAAVE-Q 146 (233)
T ss_dssp EEEECCEEEECSTTCCTTCEEEEEEEEESSCB--CGGGTCCTT--CCT-TSCSSEECCHHHHHHHHHHHHTCCSSCEE-E
T ss_pred EEEEEEEeecCCCCCccccEEEEceEEEccCC--ccccCCcCC--CCC-CCCccccCCHHHHHHHHHHHHhcCCCcEE-E
Confidence 99999999999999999999999999999864 233432211 011 12234689999999999999999999 99 9
Q ss_pred eeEEEecCCcccCHHH-HHHHH-Hc-CCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHH
Q psy17032 163 GTAVCIEGPRFSSRAE-SNLFR-SW-NAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKEN 239 (283)
Q Consensus 163 G~~~~~~Gp~fet~aE-~~~~~-~~-Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~ 239 (283)
|++ ++||+|.+.++ .++++ ++ |+++||||+++++++|+++|+||++||+|||.+++ +.+.+++++++.+.+
T Consensus 147 G~~--~sgd~f~~~~~~~~~l~~~~~ga~~veME~aa~a~~a~~~gip~~~ir~IsD~a~~---~~~~~~~~~~~~aa~- 220 (233)
T 3eei_A 147 GLI--VSGDRFVHSSEGVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADE---KADISFDEFLKTAAA- 220 (233)
T ss_dssp EEE--EECSBCCCSHHHHHHHHHHCTTEEEEESSHHHHHHHHHHTTCCEEEEEEEEECSST---THHHHHHHHHHHHHH-
T ss_pred EEE--EEcceeeCCHHHHHHHHHHcCCceEEechHHHHHHHHHHcCCCEEEEEEEecCCCC---cchhhHHHHHHHHHH-
Confidence 998 68999976554 56665 57 99999999999999999999999999999999865 456677777766554
Q ss_pred HHHHHHHHHHHHHhc
Q psy17032 240 VEKITKLFVHIVPKI 254 (283)
Q Consensus 240 ~~~~~~ll~~~l~~l 254 (283)
++.+++.++|++|
T Consensus 221 --~~~~~v~~~l~~l 233 (233)
T 3eei_A 221 --NSAKMVAEIVKSL 233 (233)
T ss_dssp --HHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHhC
Confidence 4567888888865
No 19
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes}
Probab=100.00 E-value=8.8e-38 Score=276.27 Aligned_cols=229 Identities=14% Similarity=0.175 Sum_probs=180.5
Q ss_pred CCCceEEEEeCCCCCCcccccccceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchH-HHHHHHHHcC
Q psy17032 3 VSKIKIGFIGGSGLNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYR-ANIWALKSVG 81 (283)
Q Consensus 3 ~~~~~igIIggsgl~~~~~l~~~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~-a~~~~l~~~G 81 (283)
|.+|+|||||++.. |.+.+....+...+..++ +.+||+|+++|++|+++ ++|+|+ ++++ ++.+++..||
T Consensus 3 ~~~MkIgII~Al~~-E~~~l~~~l~~~~~~~~~--~~~~~~G~~~g~~Vvv~-~~G~G~------~~aa~~~~~l~~~~~ 72 (236)
T 4g41_A 3 MGSMKIGIIAAMEE-ELSLLLANLLDAQEHQVL--SKTYYTGRFGKHELILV-QSGVGK------VMSAMTVAILVEHFK 72 (236)
T ss_dssp SCSCEEEEEECCHH-HHHHHHHTCEEEEEEEET--TEEEEEEEETTEEEEEE-ECCSHH------HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEccCHH-HHHHHHHhccCCceEecC--CcEEEEEEECCEEEEEE-eCCCCH------HHHHHHHHHHHHhCC
Confidence 56899999999542 334444433333333322 45899999999999999 599985 7766 4567789999
Q ss_pred CCEEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEe
Q psy17032 82 CTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHD 161 (283)
Q Consensus 82 v~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~ 161 (283)
++.+|++|+|||+++++++||+||+++++++|.+.. .+..... .....+..+++|++|++.+++.+++.+.++|
T Consensus 73 ~~~ii~~G~aGgl~~~i~~GDvvi~~~~i~~d~~~~--~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~- 146 (236)
T 4g41_A 73 AQAIINTGSAGAVASHLAIGDVVVADRLVYHDVDAT--AFGYAYG---QMAGQPLYYDCDPQFVAIFKQVLKHEKTNGQ- 146 (236)
T ss_dssp CSEEEEEEEECBCSTTCCTTCEEEEEEEEESSCBCG--GGTCCTT---CCTTSCSSEECCHHHHHHHHHHHHHTTCCEE-
T ss_pred CCEEEEEeeecCCCCCCCCCeEEEEeeeEEcCCCCC--ccCCcCC---cCCCCCccccCCHHHHHHHHHHHHhcCCCee-
Confidence 999999999999999999999999999999987543 2333221 1112344678999999999999999999999
Q ss_pred eeeEEEecCCcccCHHH-HHHH-HHc-CCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHH
Q psy17032 162 KGTAVCIEGPRFSSRAE-SNLF-RSW-NAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKE 238 (283)
Q Consensus 162 ~G~~~~~~Gp~fet~aE-~~~~-~~~-Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~ 238 (283)
.|++ .+|++|...++ .+.+ +++ |+++||||+++++++|+++|+||++||.|||++++ +.+.+++++++.+.+
T Consensus 147 ~G~i--~S~d~~~~~~~~~~~l~~~~~g~~~veME~aa~~~va~~~~~p~~~Ir~ISD~ad~---~~~~~~~~~~~~Aa~ 221 (236)
T 4g41_A 147 VGLI--ATGDSFVAGQDKIDQIKTAFSNVLAVEMEGAAIAQAAHTAGKPFIVVRAMSDTAAH---DANITFDQFIIEAGK 221 (236)
T ss_dssp EEEE--EECSBCCCCHHHHHHHHHHSTTCCEEESSHHHHHHHHHHTTCCEEEEEEESSCTTC---CCCSCHHHHHHHHHH
T ss_pred eceE--EecCCcccCHHHHHHHHHHcCCCeEEechHHHHHHHHHHcCCCEEEEEEEEeCCCC---cCcccHHHHHHHHHH
Confidence 9998 58999865444 4444 566 99999999999999999999999999999999865 567899999887665
Q ss_pred HHHHHHHHHHHHHHhcc
Q psy17032 239 NVEKITKLFVHIVPKIA 255 (283)
Q Consensus 239 ~~~~~~~ll~~~l~~l~ 255 (283)
+ +.++++++|++|+
T Consensus 222 ~---~a~~v~~~l~~lP 235 (236)
T 4g41_A 222 R---SAQILMTFLENLP 235 (236)
T ss_dssp H---HHHHHHHHHHTSC
T ss_pred H---HHHHHHHHHHHcC
Confidence 4 4578999999885
No 20
>1zos_A 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase; transition state, inhibitor, hydrolase; HET: MTM; 1.60A {Streptococcus pneumoniae R6} PDB: 3mms_A*
Probab=100.00 E-value=1.2e-36 Score=267.70 Aligned_cols=225 Identities=17% Similarity=0.204 Sum_probs=175.0
Q ss_pred ceEEEEeCCCCCCcccccccceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHH-HHcCCCE
Q psy17032 6 IKIGFIGGSGLNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWAL-KSVGCTH 84 (283)
Q Consensus 6 ~~igIIggsgl~~~~~l~~~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l-~~~Gv~~ 84 (283)
|+||||+|++. |.+.+....+....++++ +..+++|+++|++|+++ ++|+|+ ++++++++.| +.+|++.
T Consensus 1 m~i~Ii~a~~~-E~~~~~~~l~~~~~~~~~--~~~~~~G~~~g~~V~~~-~~G~G~------~~aa~~~~~l~~~~~~~~ 70 (230)
T 1zos_A 1 MKIGIIAAMPE-ELAYLVQHLDNTQEQVVL--GNTYHTGTIASHEVVLV-ESGIGK------VMSAMSVAILADHFQVDA 70 (230)
T ss_dssp CEEEEEESSGG-GTHHHHHTCEEEEEEEET--TEEEEEEEETTEEEEEE-ECCSSH------HHHHHHHHHHHHHHCCSE
T ss_pred CeEEEEecCHH-HHHHHHHHhcccceeecC--CeEEEEEEECCEEEEEE-ECCCCH------HHHHHHHHHHHHhcCCCE
Confidence 47999999764 433333333333334544 45899999999999999 699985 7777656555 7899999
Q ss_pred EEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeeee
Q psy17032 85 VIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKGT 164 (283)
Q Consensus 85 iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~ 164 (283)
||++|+|||+++++++||+||++++++++.+. +.++.+.+ .-+ ..+..+++|++|++.+.+++++.++++| .|+
T Consensus 71 ii~~G~aG~l~~~~~~Gdvvv~~~~~~~d~~~--~~~g~~~g--~~p-~~~~~~~~d~~l~~~~~~~~~~~~~~~~-~G~ 144 (230)
T 1zos_A 71 LINTGSAGAVAEGIAVGDVVIADKLAYHDVDV--TAFGYAYG--QMA-QQPLYFESDKTFVAQIQESLSQLDQNWH-LGL 144 (230)
T ss_dssp EEEEEEEEECSTTCCTTCEEEEEEEEESSCBC--GGGTCCTT--CCT-TSCSCEECCHHHHHHHHHTSCTTCCSEE-EEE
T ss_pred EEEEEEecCCCCCCccCCEEEEeeeEEcCCCC--CccCCcCC--CCC-CCCCcccCCHHHHHHHHHHHHhcCCcEE-Eee
Confidence 99999999999999999999999999998752 33332211 011 1122458999999999999999999999 998
Q ss_pred EEEecCCcccCHHH-HHHH-HHc-CCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHH
Q psy17032 165 AVCIEGPRFSSRAE-SNLF-RSW-NAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVE 241 (283)
Q Consensus 165 ~~~~~Gp~fet~aE-~~~~-~~~-Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~ 241 (283)
+ ++||+|++.+| .+++ +++ |+++||||+++++++|+++|+||++||.|||++++ ..+.+++++ +++++.
T Consensus 145 ~--~sgd~f~~~~~~~~~l~~~~~g~~~veME~aa~~~~a~~~~~~~~~ir~IsD~~~~---~~~~~~~~~---~~~aa~ 216 (230)
T 1zos_A 145 I--ATGDSFVAGNDKIEAIKSHFPEVLAVEMEGAAIAQAAHTLNLPVLVIRAMSDNANH---EANIFFDEF---IIEAGR 216 (230)
T ss_dssp E--EECSBCCCSHHHHHHHHHHCTTEEEEESSHHHHHHHHHHTTCCEEEEEEEEECSST---THHHHHHHH---HHHHHH
T ss_pred E--EECCcccCCHHHHHHHHHhCCCCcEehhhHHHHHHHHHHcCCCEEEEEEeccCCCC---cchhhHHHH---HHHHHH
Confidence 6 69999999888 4555 678 99999999999999999999999999999999865 334445555 445566
Q ss_pred HHHHHHHHHHHhc
Q psy17032 242 KITKLFVHIVPKI 254 (283)
Q Consensus 242 ~~~~ll~~~l~~l 254 (283)
++.+++.++|++|
T Consensus 217 ~~~~~~~~~l~~l 229 (230)
T 1zos_A 217 RSAQVLLAFLKAL 229 (230)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 6778999998875
No 21
>3bl6_A 5'-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN, alpha and beta proteins, hydrolase; HET: FMC; 1.70A {Staphylococcus aureus}
Probab=100.00 E-value=9.4e-37 Score=268.32 Aligned_cols=223 Identities=17% Similarity=0.210 Sum_probs=176.1
Q ss_pred ceEEEEeCCCCCCcccccccceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHH-HHHHHcCCCE
Q psy17032 6 IKIGFIGGSGLNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANI-WALKSVGCTH 84 (283)
Q Consensus 6 ~~igIIggsgl~~~~~l~~~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~-~~l~~~Gv~~ 84 (283)
|+||||+|++. |.+.+....+....++++ +..++.|+++|++|+++ ++|+|+ +++++++ ++++.+|++.
T Consensus 2 m~i~ii~a~~~-E~~~~~~~l~~~~~~~~~--~~~~~~G~~~g~~V~~~-~~G~G~------~~aa~~~~~l~~~~~~~~ 71 (230)
T 3bl6_A 2 MMIGIIGAMEE-EVTILKNKLTQLSEISVA--HVKFYTGILKDREVVIT-QSGIGK------VNAAISTTLLINKFKPDV 71 (230)
T ss_dssp CEEEEEESSHH-HHHHHHTTCEEEEEEEET--TEEEEEEEETTEEEEEE-ECCSSH------HHHHHHHHHHHHHHCCSE
T ss_pred cEEEEEecCHH-HHHHHHHHhcccceeeeC--CeEEEEEEECCEEEEEE-ECCCCH------HHHHHHHHHHHHhcCCCE
Confidence 57999999763 333333333333334444 45899999999999998 699986 7777555 5788999999
Q ss_pred EEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccC--CCCCCCCHHHHHHHHHHHHHcCCcEEee
Q psy17032 85 VIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHI--PMEPAFDNSTRQIIIDSLKELGFKFHDK 162 (283)
Q Consensus 85 iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~--~~~~~~d~~L~~~~~~~a~~~g~~~~~~ 162 (283)
+|++|+|||+++++++||+||++++++++.+ .+.++.+. + .++ +..+++|++|++.+.+++++.++++| .
T Consensus 72 ii~~G~aG~l~~~~~~Gdvvv~~~~~~~d~~--~~~~g~~~----g-~~p~~~~~~~~d~~l~~~~~~~~~~~~~~~~-~ 143 (230)
T 3bl6_A 72 IINTGSAGALDESLNVGDVLISDDVKYHDAD--ATAFGYEY----G-QIPQMPVAFQSSKPLIEKVSQVVQQQQLTAK-V 143 (230)
T ss_dssp EEECSEEEECSTTCCTTCEEEEEEEEESSCC--CGGGTCCT----T-CCTTSCSSEECCHHHHHHHHHHHHHTTCCEE-E
T ss_pred EEEEEEEcCCCCCCccCCEEEECeeEEccCC--CcccCCcC----C-cCCCCCccccCCHHHHHHHHHHHHhcCCCeE-E
Confidence 9999999999999999999999999999875 23332221 1 122 22458999999999999999999999 9
Q ss_pred eeEEEecCCcccCHHHH-HH-HHHc-CCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHH
Q psy17032 163 GTAVCIEGPRFSSRAES-NL-FRSW-NAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKEN 239 (283)
Q Consensus 163 G~~~~~~Gp~fet~aE~-~~-~~~~-Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~ 239 (283)
|++ ++||+|++.+|. +. ++++ |+++||||+++++++|+++|+||++||.|||++++ ..+.+++++.+.+
T Consensus 144 G~~--~sgd~f~~~~~~~~~l~~~~~g~~~veME~a~~~~~a~~~~~~~~~ir~IsD~~~~---~~~~~~~~~~~~a--- 215 (230)
T 3bl6_A 144 GLI--VSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANG---EAEMSFEAFLEKA--- 215 (230)
T ss_dssp EEE--EECSSCCCSHHHHHHHHHHCTTEEEEESSHHHHHHHHHHHTCCEEEEEEEEECSST---THHHHHHHHHHHH---
T ss_pred eeE--eEcchhhCCHHHHHHHHHhCCCcEEEEchHHHHHHHHHHcCCCEEEEEEeccCCCC---cchhhHHHHHHHH---
Confidence 986 599999998884 44 5778 99999999999999999999999999999999865 3556777776654
Q ss_pred HHHHHHHHHHHHHhc
Q psy17032 240 VEKITKLFVHIVPKI 254 (283)
Q Consensus 240 ~~~~~~ll~~~l~~l 254 (283)
+.++.+++.++|++|
T Consensus 216 a~~~~~~~~~~l~~~ 230 (230)
T 3bl6_A 216 AVSSSQTVEALVSQL 230 (230)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhC
Confidence 445667999988764
No 22
>3bsf_A AT4G34840, nucleosidase; alpha-beta, hydrolase; HET: ADE; 2.90A {Arabidopsis thaliana}
Probab=100.00 E-value=9.4e-37 Score=273.27 Aligned_cols=228 Identities=14% Similarity=0.126 Sum_probs=177.3
Q ss_pred CceEEEEeCCCCCCcccccccce-eeee-CCCCC-CcccEEEEEECCeEEEEEeccCCCcccC---CCccchHH-HHHHH
Q psy17032 5 KIKIGFIGGSGLNNPQILENAQE-VAVD-TPYGA-PSDVLLQGTIQGVDCVILARHGRKHTIN---PSNVNYRA-NIWAL 77 (283)
Q Consensus 5 ~~~igIIggsgl~~~~~l~~~~~-~~~~-~~~G~-~~~~~~~G~~~G~~Vv~~~r~G~g~~~~---~~~V~~~a-~~~~l 77 (283)
.++||||+|++. |.+.+....+ .... ++++. .+..+|+|+++|++|+++ ++|++|.|+ +.++|+++ ..+++
T Consensus 13 ~~~i~II~a~~~-E~~~l~~~l~~~~~~~~~~~~~~~~~~~~G~~~g~~V~v~-~~G~~h~~~~~~iG~~~aa~~~~~ll 90 (254)
T 3bsf_A 13 ISTIVFIVAMQK-EAQPLINRLRLVEEVNTPFPKEVTWIMFKGMYKDLNINIV-CPGKDSTLGVESVGTVPASLVTYASI 90 (254)
T ss_dssp CCEEEEECSCHH-HHHHHHHHHTCEEESSCSSCTTSCCEEEEEEETTEEEEEE-ECCBCTTTCSBCCSHHHHHHHHHHHH
T ss_pred CCeEEEEEeCHH-HHHHHHHHhcccccccccccCCCCeEEEEEEECCEEEEEE-ECCCccccccCccCHHHHHHHHHHHH
Confidence 478999999763 3333322222 2222 35531 355899999999999999 699999998 88999885 44788
Q ss_pred HHcCCCEEEEecccccC-CCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcC
Q psy17032 78 KSVGCTHVIVSTATGSL-QEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELG 156 (283)
Q Consensus 78 ~~~Gv~~iI~tg~aG~l-~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g 156 (283)
+.+|++.||++|+|||+ ++++++||+||++++++++.+.+...|+... .+ .++. + +|++|++ +
T Consensus 91 ~~~~~~~iI~~G~aGgl~~~~~~~GDvvi~~~~~~~d~~~~~~~~~~~~---~~-~~p~--~-~~~~L~~---------~ 154 (254)
T 3bsf_A 91 LAIQPDLIINAGTAGGFKAKGACISDVYVVSTVAFHDRRIPVPVLDIYG---VG-MRNT--F-PTPNLIK---------E 154 (254)
T ss_dssp HSSCCSEEEEEEEEEECGGGTCCTTCEEEEEEEEESSCCCCSTTHHHHH---HC-CEEC--C-CCHHHHH---------H
T ss_pred HHcCCCEEEEEEeecCcCCCCCccCCEEEEeeeeeccCCCCccccCcCC---CC-cCCC--C-CCHHHHh---------C
Confidence 89999999999999999 8999999999999999998754322221000 01 1222 2 5788875 5
Q ss_pred CcEEeeeeEEEecCCccc-CHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHH
Q psy17032 157 FKFHDKGTAVCIEGPRFS-SRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKT 235 (283)
Q Consensus 157 ~~~~~~G~~~~~~Gp~fe-t~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~ 235 (283)
+++| .|++ ++||+|+ |+++.++++++|+++||||+++++++|+++|+||++||.|||++++. .+ +++++.+.
T Consensus 155 ~~~~-~G~i--~sgd~f~~~~~~~~~~~~~g~~~veME~aa~a~va~~~~ip~~~Ir~ISD~a~~~---~~-s~~~~~~~ 227 (254)
T 3bsf_A 155 LNLK-VGRL--STGDSMDMSPHDEESITANDATVKDMEGAAVAYVADIFKVPTILIKGVTDIVDGN---RP-TSEEFLEN 227 (254)
T ss_dssp TTCE-EEEE--EECSCSSCCHHHHHHHHHTTCSEEESSHHHHHHHHHHTTCCEEEEEEEEEETTTT---CC-STTTTTSH
T ss_pred CCeE-EeeE--EECccccCCHHHHHHHHHcCCcEEECcHHHHHHHHHHcCCCEEEEEEEEEcCCCC---Cc-cHHHHHHH
Confidence 6788 8985 7999998 88888888889999999999999999999999999999999999653 33 56677777
Q ss_pred HHHHHHHHHHHHHHHHHhcccc
Q psy17032 236 FKENVEKITKLFVHIVPKIAAK 257 (283)
Q Consensus 236 ~~~~~~~~~~ll~~~l~~l~~~ 257 (283)
+++++.++.+++.++|+++..+
T Consensus 228 ~~~a~~~~~~~l~~~l~~l~~~ 249 (254)
T 3bsf_A 228 LAAVTAKLDESLTKVIDFISGK 249 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhccc
Confidence 7777788889999999998754
No 23
>2h8g_A 5'-methylthioadenosine nucleosidase; protein-adenine complex, hydrolase; HET: ADE; 1.50A {Arabidopsis thaliana} PDB: 2qsu_A 2qtg_A* 2qtt_A* 3lgs_A*
Probab=100.00 E-value=4e-36 Score=271.30 Aligned_cols=229 Identities=14% Similarity=0.148 Sum_probs=179.7
Q ss_pred CceEEEEeCCCCCCcccc-cccceeee-eCCCC-CCcccEEEEEECCeEEEEEeccCCCcccC---CCccchHH-HHHHH
Q psy17032 5 KIKIGFIGGSGLNNPQIL-ENAQEVAV-DTPYG-APSDVLLQGTIQGVDCVILARHGRKHTIN---PSNVNYRA-NIWAL 77 (283)
Q Consensus 5 ~~~igIIggsgl~~~~~l-~~~~~~~~-~~~~G-~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~---~~~V~~~a-~~~~l 77 (283)
.++||||+|++. |.+.+ +....... .++++ ..+..+|+|+++|++|+++ ++|..|.|+ +.++|+++ +.+++
T Consensus 26 ~~~i~II~A~~~-E~~~l~~~l~~~~~~~~~~~~~~~~~~~~G~~~g~~Vvv~-~~G~~h~~~~~~~G~v~aa~~~~~ll 103 (267)
T 2h8g_A 26 ISSVVFVIAMQA-EALPLVNKFGLSETTDSPLGKGLPWVLYHGVHKDLRINVV-CPGRDAALGIDSVGTVPASLITFASI 103 (267)
T ss_dssp CCEEEEECSCHH-HHHHHHHHTTCEECCSCSSCSSCCCEEEEEEETTEEEEEE-ECCBCTTTCSBCCSHHHHHHHHHHHH
T ss_pred CCEEEEEEECHH-HHHHHHHHhccccccccccccCCCcEEEEEEECCEEEEEE-ECCCccccccCcccHHHHHHHHHHHH
Confidence 468999999763 33333 22222222 23543 2356899999999999999 699899887 77888885 57888
Q ss_pred HHcCCCEEEEecccccC-CCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcC
Q psy17032 78 KSVGCTHVIVSTATGSL-QEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELG 156 (283)
Q Consensus 78 ~~~Gv~~iI~tg~aG~l-~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g 156 (283)
+.+|++.||++|+|||+ ++++++||+||++++++++.+++.+.|+... .+ .++. + .|++|++ +
T Consensus 104 ~~~~~~~iI~~G~aGgl~~~~~~~GDvVi~~~~i~~d~~~~~~~f~~~~---~~-~~p~--~-~~~~L~~---------~ 167 (267)
T 2h8g_A 104 QALKPDIIINAGTCGGFKVKGANIGDVFLVSDVVFHDRRIPIPMFDLYG---VG-LRQA--F-STPNLLK---------E 167 (267)
T ss_dssp HHHCCSEEEEEEEEEECGGGTCCTTCEEEEEEEEESSCCCCSTTHHHHH---HC-CEEC--C-CCHHHHH---------H
T ss_pred HHcCCCEEEEEEeecccCCCCCCCCCEEEEeeheeccCCCCccccCccc---cC-CCCC--C-CCHHHHh---------C
Confidence 99999999999999999 8999999999999999999865544332100 01 1222 2 3788875 3
Q ss_pred CcEEeeeeEEEecCCccc-CHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHH
Q psy17032 157 FKFHDKGTAVCIEGPRFS-SRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKT 235 (283)
Q Consensus 157 ~~~~~~G~~~~~~Gp~fe-t~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~ 235 (283)
+++| .|++ ++||+|+ ++++.++++++|+++||||+++++++|+++|+||++||.|||++++. . .+++++.+.
T Consensus 168 ~~~~-~G~i--~sgd~f~~~~~~~~~l~~~ga~~veME~aa~a~va~~~gip~~~Ir~ISD~a~~~---~-~s~~~~~~~ 240 (267)
T 2h8g_A 168 LNLK-IGRL--STGDSLDMSTQDETLIIANDATLKDMEGAAVAYVADLLKIPVVFLKAVTDLVDGD---K-PTAEEFLQN 240 (267)
T ss_dssp HCCE-EEEE--EECSCSSCCHHHHHHHHHTTCSEEESSHHHHHHHHHHTTCCEEEEEEEEEETTSS---S-CHHHHHHHH
T ss_pred CCeE-EeeE--EECCcccCCHHHHHHHHHcCCeEEeccHHHHHHHHHHcCCCEEEEEEEEECcccc---c-cchHHHHHH
Confidence 5788 8985 7999998 57777888889999999999999999999999999999999998652 2 468899988
Q ss_pred HHHHHHHHHHHHHHHHHhccccC
Q psy17032 236 FKENVEKITKLFVHIVPKIAAKD 258 (283)
Q Consensus 236 ~~~~~~~~~~ll~~~l~~l~~~~ 258 (283)
+++++.++.+++.++|++|..+.
T Consensus 241 ~~~aa~~~~~~l~~~l~~l~~~~ 263 (267)
T 2h8g_A 241 LTVVTAALEGTATKVINFINGRN 263 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhcccc
Confidence 88889999999999999997543
No 24
>2b94_A Purine nucleoside phosphorylase; SGPP, structural genomics, PSI, protein structure initiative UDP, ontario/toronto SGC; 1.85A {Plasmodium knowlesi} PDB: 3emv_A 1sq6_A 2bsx_A* 3enz_A*
Probab=100.00 E-value=7.3e-35 Score=262.98 Aligned_cols=219 Identities=12% Similarity=0.132 Sum_probs=165.2
Q ss_pred ceEEEEeCCCCCCccccccccee-eeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCCE
Q psy17032 6 IKIGFIGGSGLNNPQILENAQEV-AVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCTH 84 (283)
Q Consensus 6 ~~igIIggsgl~~~~~l~~~~~~-~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~~ 84 (283)
++++||+|++. +.+.+....+. .....++ +..+|+|+|+|++|+++ ++|+|+ ++++++++.|..+|++.
T Consensus 39 ~~i~Ii~a~~~-e~~~l~~~l~~~~~~~~~~--~~~~~~G~~~g~~V~v~-~~GiG~------~~aa~~~~~L~~~g~~~ 108 (267)
T 2b94_A 39 TPVVLVVGDPG-RVDKVKMLCDSYVDLAYNR--EYKSVECTYKGQKFLCV-SHGVGS------AGCAICFEELMNNGAKV 108 (267)
T ss_dssp CSEEEECSSHH-HHHHHHHTSSEEEECC-----CEEEEEEEETTEEEEEE-EECTTC------SCSHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHH-HHHHHHHHhccceEeeecC--CeEEEEEEECCEEEEEE-eCCCCH------HHHHHHHHHHHHcCCCE
Confidence 57999999764 33333222222 2222322 34789999999999999 699996 67776677777999999
Q ss_pred EEEecccccCCCC-CCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeee
Q psy17032 85 VIVSTATGSLQEE-IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKG 163 (283)
Q Consensus 85 iI~tg~aG~l~~~-l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G 163 (283)
||++|+|||++++ +++||+||+++++++++.. .++.. + .+..++|++|++.+.+++++++++++ .|
T Consensus 109 iI~~G~aGgl~~~~l~~GDvVi~~~~i~~dg~~--~~~~p-------~---~~~~~~d~~L~~~l~~~~~~~~~~~~-~G 175 (267)
T 2b94_A 109 IIRAGSCGSLQPTQMKRGDICICNAAVREDRVS--HLMIY-------S---DFPAVADFEVYDTLNKVAQELEVPVF-NG 175 (267)
T ss_dssp EEEEEEEEESCTTTCCTTCEEEEEEEEEESSTH--HHHSC-------T---TSCEECCHHHHHHHHHHHHHTTCCCE-EE
T ss_pred EEEeccccccCcccCCCCCEEEEhhhcccCCCC--ccccC-------C---CcCCCCCHHHHHHHHHHHHHcCCCeE-EE
Confidence 9999999999999 9999999999999998732 12210 1 22347999999999999999999999 89
Q ss_pred eEEEecCCccc--C--HHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHH-HHHHHHHH
Q psy17032 164 TAVCIEGPRFS--S--RAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVA-DVLKTFKE 238 (283)
Q Consensus 164 ~~~~~~Gp~fe--t--~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~-e~~~~~~~ 238 (283)
++ ++||+|. + +++.++++++|+++||||+++++++|+++|+||++||+|||+++. .+..+++ ++.+.+
T Consensus 176 ~i--~sgd~f~~~~~~~~~~~~~~~~ga~~veME~aa~a~va~~~gip~~~Ir~IsD~~~~---~~~~~~~~~~~~~a-- 248 (267)
T 2b94_A 176 IS--LSSDLYYPHKIIPTRLEDYSKANVAVVEMEVATLMVMGTLRKVKTGGIFIVDGCPLK---WDEGDFDNNLVPEK-- 248 (267)
T ss_dssp EE--EEESSHHHHCCCCTTHHHHHHTTCCEEESSHHHHHHHHHHHTCEEEEEEEEEECGGG---C-------CCCHHH--
T ss_pred EE--eeeCccccCCcchHHHHHHHHcCCeEEeCcHHHHHHHHHHcCCcEEEEEEEEccccc---CccccCCHHHHHHH--
Confidence 88 4899998 4 456678899999999999999999999999999999999999854 2333343 444433
Q ss_pred HHHHHHHHHHHHHHhcc
Q psy17032 239 NVEKITKLFVHIVPKIA 255 (283)
Q Consensus 239 ~~~~~~~ll~~~l~~l~ 255 (283)
..++.+++++++++|.
T Consensus 249 -~~~~~~~~l~~l~~l~ 264 (267)
T 2b94_A 249 -LENMIKISLETCARLA 264 (267)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 3345678888887764
No 25
>1odk_A Purine nucleoside phosphorylase; alpha-beta protein, transferase, riken structural genomics/proteomics initiative, RSGI; 1.9A {Thermus thermophilus} SCOP: c.56.2.1 PDB: 1odj_A* 1odi_A 1odl_A
Probab=100.00 E-value=6.2e-34 Score=251.87 Aligned_cols=209 Identities=11% Similarity=0.121 Sum_probs=160.1
Q ss_pred ceEEEEeCCCCCCccccccc-cee-eeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCC
Q psy17032 6 IKIGFIGGSGLNNPQILENA-QEV-AVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCT 83 (283)
Q Consensus 6 ~~igIIggsgl~~~~~l~~~-~~~-~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~ 83 (283)
.+++||+|+.. +.+.+... .+. ......+ +..+|+|+|+|++|+++ ++|+|+ ++++++++.|..+|++
T Consensus 14 ~~~~ii~g~~~-e~~~l~~~~l~~~~~~~~~~--~~~~~~G~~~g~~V~v~-~~G~G~------~~aa~~~~~l~~~~~~ 83 (235)
T 1odk_A 14 AERVLLPGDPG-RAEWIAKTFLQNPRRYNDHR--GLWGYTGLYKGVPVSVQ-TTGMGT------PSAAIVVEELVRLGAR 83 (235)
T ss_dssp CSEEEECSCHH-HHHHHHHHHCEEEEEEECGG--GCCEEEEEETTEEEEEE-CCCSSH------HHHHHHHHHHHHTTCC
T ss_pred CCeEEEcCCHH-HHHHHHHHHhccchhhhhcC--CeEEEEEEECCEEEEEE-ecCCCH------HHHHHHHHHHHHCCCC
Confidence 47999999652 33444332 222 2222211 34799999999999999 699996 6777666666669999
Q ss_pred EEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeee
Q psy17032 84 HVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKG 163 (283)
Q Consensus 84 ~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G 163 (283)
.||++|+|||+++++++||+||+++++++++..+ .++. +..|+ .++|++|++.+.+++++.++++| .|
T Consensus 84 ~iI~~G~aG~l~~~~~~GDvvv~~~~~~~dg~~~-~~~~-------~~~~~---~~~d~~L~~~~~~~~~~~~~~~~-~G 151 (235)
T 1odk_A 84 VLVRVGTAGAASSDLAPGELIVAQGAVPLDGTTR-QYLE-------GRPYA---PVPDPEVFRALWRRAEALGYPHR-VG 151 (235)
T ss_dssp EEEEEEEEEESSTTSCTTCEEEEEEEEEESHHHH-HHHT-------TCCCC---CCCCHHHHHHHHHHHHHTTCCEE-EE
T ss_pred EEEEEeccccCCCCCCCCCEEEEchhhccCCCCc-cccC-------CCCCC---CcCCHHHHHHHHHHHHHcCCCeE-EE
Confidence 9999999999999999999999999999986322 1121 11222 36999999999999999999999 99
Q ss_pred eEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHH
Q psy17032 164 TAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKEN 239 (283)
Q Consensus 164 ~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~ 239 (283)
++++.+++.++++++.++++++|+++||||+++++++|+++|+||++||.|||++++ .+.++.+|+.+...+.
T Consensus 152 ~~~s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~~~a~~~gip~~~ir~IsD~~~~---~~~~~~~~~~~~~~~~ 224 (235)
T 1odk_A 152 LVASEDAFYATTPEEARAWARYGVLAFEMEASALFLLGRMRGVRTGAILAVSNRIGD---PELAPPEVLQEGVRRM 224 (235)
T ss_dssp EEEEESCTTTCCHHHHHHHHTTTEEEEESSHHHHHHHHHHHTCEEEEEEEEEEEC---------CHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHcCCcEEeccHHHHHHHHHHcCCCEEEEEEEecCccc---CccCCHHHHHHHHHHH
Confidence 997666666677777888899999999999999999999999999999999999865 3458888887655543
No 26
>1je0_A MTAP;, 5'-methylthioadenosine phosphorylase; alpha-beta protein, transferase; 1.60A {Sulfolobus solfataricus} SCOP: c.56.2.1 PDB: 1jdt_A* 1jdu_A 1jdv_A* 1jdz_A* 1jds_A 1je1_A* 1jp7_A 1jpv_A
Probab=100.00 E-value=7e-34 Score=251.54 Aligned_cols=218 Identities=16% Similarity=0.127 Sum_probs=163.2
Q ss_pred ceEEEEeCCCCCCcccccccceeeee-CCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCCE
Q psy17032 6 IKIGFIGGSGLNNPQILENAQEVAVD-TPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCTH 84 (283)
Q Consensus 6 ~~igIIggsgl~~~~~l~~~~~~~~~-~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~~ 84 (283)
.+++||+|+.. +.+.+....+.... ...+ +..+|+|+|+|++|+++ ++|+|+ ++++++++.|..+|++.
T Consensus 14 a~~vii~g~p~-e~~~l~~~l~~~~~~~~~~--~~~~~~G~~~g~~V~v~-~~G~G~------~~aa~~~~~l~~~~~~~ 83 (236)
T 1je0_A 14 AERVLVVGDPG-RARLLSTLLQNPKLTNENR--GFLVYTGKYNGETVSIA-THGIGG------PSIAIVLEELAMLGANV 83 (236)
T ss_dssp CSEEEEESCHH-HHHHHGGGSEEEEEEECGG--GCCEEEEEETTEEEEEE-ECCSSH------HHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHH-HHHHHHHhcccCceeeccC--CeEEEEEEECCEEEEEE-ecCCCH------hHHHHHHHHHHHcCCCE
Confidence 48999999552 33444433333222 1212 34799999999999999 699996 67776677776699999
Q ss_pred EEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeeee
Q psy17032 85 VIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKGT 164 (283)
Q Consensus 85 iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~ 164 (283)
||++|+|||+++++++||+||+++++++++++ |... .+..+.+..++|++|++.+.+++++.++++| .|+
T Consensus 84 iI~~G~aGgl~~~~~~GDvvi~~~~~~~d~~~---~~~~------~p~~~~~~~~~d~~l~~~~~~~~~~~~~~~~-~G~ 153 (236)
T 1je0_A 84 FIRYGTTGALVPYINLGEYIIVTGASYNQGGL---FYQY------LRDNACVASTPDFELTNKLVTSFSKRNLKYY-VGN 153 (236)
T ss_dssp EEEEEEEEECSTTCCTTCEEEEEEEEBCCSHH---HHHH------HSSCCBCCCCCCHHHHHHHHHHHHHTTCCEE-EEE
T ss_pred EEEEeccccCCCCCCCCCEEEEhhhccCCCCc---cccc------cCCCCCCCCCCCHHHHHHHHHHHHHcCCCeE-EEE
Confidence 99999999999999999999999999998752 1110 0111123368999999999999999999999 899
Q ss_pred EEEecCCcc--cCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHHH
Q psy17032 165 AVCIEGPRF--SSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEK 242 (283)
Q Consensus 165 ~~~~~Gp~f--et~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~~ 242 (283)
++ +||+| +++++.++++++|+++||||+++++++|+++|+||++||.|||++++. .+.++++++.+... +
T Consensus 154 ~~--s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~~~a~~~gi~~~~ir~IsD~~~~~--~~~~~~~~~~~~~~----~ 225 (236)
T 1je0_A 154 VF--SSDAFYAEDEEFVKKWSSRGNIAVEMECATLFTLSKVKGWKSATVLVVSDNLAKG--GIWITKEELEKSVM----D 225 (236)
T ss_dssp EE--ECSCTTCCCTTHHHHHHTTTEEEEESSHHHHHHHHHHHTCEEEEEEEEEEECC----------CHHHHHHH----H
T ss_pred EE--ecCcCccCCHHHHHHHHHcCCeEEeccHHHHHHHHHHcCCcEEEEEEEEcccccC--CccCCHHHHHHHHH----H
Confidence 85 77887 666777888999999999999999999999999999999999998652 35688888866433 3
Q ss_pred HHHHHHHHH
Q psy17032 243 ITKLFVHIV 251 (283)
Q Consensus 243 ~~~ll~~~l 251 (283)
+.++.++.+
T Consensus 226 ~~~~aL~~~ 234 (236)
T 1je0_A 226 GAKAVLDTL 234 (236)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 344555543
No 27
>3ddo_A Urdpase, upase, uridine phosphorylase; transferase, cytoplasm, glycosyltransferase; 1.50A {Salmonella typhimurium} SCOP: c.56.2.1 PDB: 1ryz_A 1sj9_A* 1y1q_A* 1y1s_A 1y1r_A 1zl2_A* 2hn9_A 1y1t_A* 2hsw_A 2hwu_A* 2pga_A* 2hrd_A 3dps_A 3fwp_A* 3nsr_A* 3c74_A* 2qdk_A 2iq5_A 2oec_A* 2i8a_A ...
Probab=100.00 E-value=9e-33 Score=247.56 Aligned_cols=188 Identities=13% Similarity=0.168 Sum_probs=151.9
Q ss_pred ceEEEEeCCCCCCcccccccceeeeeC-CCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCCE
Q psy17032 6 IKIGFIGGSGLNNPQILENAQEVAVDT-PYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCTH 84 (283)
Q Consensus 6 ~~igIIggsgl~~~~~l~~~~~~~~~~-~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~~ 84 (283)
.+|+||+|+.. +.+.+....+..... ... ...+|+|+|+|++|+++ ++|+|+ ++++++++.|..+|++.
T Consensus 19 ~~i~ii~a~~~-e~~~~~~~l~~~~~~~~~~--~~~~~~G~~~g~~V~~~-~~G~G~------~~aa~~~~~l~~~g~~~ 88 (253)
T 3ddo_A 19 AQLAIVPGDPE-RVEKIAALMDKPVKLASHR--EFTSWRAELDGKAVIVC-STGIGG------PSTSIAVEELAQLGIRT 88 (253)
T ss_dssp CCEEEEESCGG-GHHHHHTTSEEEEEEEEET--TEEEEEEEETTEEEEEE-CCCSSH------HHHHHHHHHHHHTTCCE
T ss_pred CCEEEEccCHH-HHHHHHHHhCCceEeccCC--CeEEEEEEECCEEEEEE-eCCCCh------HHHHHHHHHHHHcCCCE
Confidence 58999999652 334443333322211 111 33689999999999999 599986 77777788889999999
Q ss_pred EEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeeee
Q psy17032 85 VIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKGT 164 (283)
Q Consensus 85 iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~ 164 (283)
||++|+|||+++++++||+||+++++++++.. ++|. +..|+ .++|++|++.+.++++++++++| .|+
T Consensus 89 ii~~G~aGgl~~~~~~Gdvvi~~~~i~~dg~~--~~y~-------~~~~p---~~~d~~l~~~l~~~a~~~~~~~~-~G~ 155 (253)
T 3ddo_A 89 FLRIGTTGAIQPHINVGDVLVTTASVRLDGAS--LHFA-------PMEFP---AVADFACTTALVEAAKSIGATTH-VGV 155 (253)
T ss_dssp EEEEEEECCCSTTCCTTCEEEEEEEEEESSGG--GGTS-------CTTSC---EECCHHHHHHHHHHHHHTTCCEE-EEE
T ss_pred EEEEEeeccCCCCCCCCeEEEechheeCCCcc--cccC-------CCccC---CcCCHHHHHHHHHHHHHCCCCEE-EEE
Confidence 99999999999999999999999999998742 2331 11232 36899999999999999999999 999
Q ss_pred EEEecCCccc----------------CHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecC
Q psy17032 165 AVCIEGPRFS----------------SRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYD 218 (283)
Q Consensus 165 ~~~~~Gp~fe----------------t~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a 218 (283)
++ +||+|. ++++.++|+++|+++||||+++++++|+++|+|+++|+++++.-
T Consensus 156 ~~--s~d~F~~~~~r~~~~~~~i~~~~~~~~~~~~~~ga~aveME~aa~a~va~~~gi~~~~i~~v~~~R 223 (253)
T 3ddo_A 156 TA--SSDTFYPGQERYDTYSGRVVRRFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNR 223 (253)
T ss_dssp EE--EESCSSGGGTCCCSSSCCCCGGGTTHHHHHHHTTCCEEESSHHHHHHHHHTTTCEEEEEEEECCCT
T ss_pred EE--EcCcccCCcccccccccchhhhHHHHHHHHHHCCceEEeccHHHHHHHHHHcCCcEEEEEEEEEec
Confidence 84 799995 35678889999999999999999999999999999999888765
No 28
>1z34_A Purine nucleoside phosphorylase; alpha-beta-alpha sandwich, transferase; HET: 2FD; 2.40A {Trichomonas vaginalis} PDB: 1z33_A* 1z35_A* 1z36_A* 1z37_A* 1z38_A* 1z39_A* 2i4t_A* 2isc_A*
Probab=100.00 E-value=3.2e-32 Score=240.81 Aligned_cols=207 Identities=14% Similarity=0.126 Sum_probs=156.6
Q ss_pred ceEEEEeCCCCCCccccc-cccee-eeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHH-HHHHHcCC
Q psy17032 6 IKIGFIGGSGLNNPQILE-NAQEV-AVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANI-WALKSVGC 82 (283)
Q Consensus 6 ~~igIIggsgl~~~~~l~-~~~~~-~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~-~~l~~~Gv 82 (283)
.++.|+.|... ..+.+. ...+. ......+ +..+|+|+|+|++|+++ ++|+|+ ++++.++ ++++.+|+
T Consensus 13 a~~vi~~gdp~-r~~~ia~~~l~~~~~~~~~~--~~~~~~G~~~g~~V~v~-~~G~G~------~~aa~~~~~l~~~~g~ 82 (235)
T 1z34_A 13 AETVLMCGDPL-RAKLIAETYLENPKLVNNVR--GIQGYTGTYKGKPISVM-GHGMGL------PSICIYAEELYSTYKV 82 (235)
T ss_dssp CSEEEEESCHH-HHHHHHHHHCEEEEEEECGG--GCCEEEEEETTEEEEEE-ECCSSH------HHHHHHHHHHHHTSCC
T ss_pred CCEEEecCCHH-HHHHHHHHHhhcceeeeeeC--CEEEEEEEECCEEEEEE-ecCCCH------HHHHHHHHHHHHHcCC
Confidence 46888888542 223333 22222 2221222 44799999999999998 699996 6666544 56788999
Q ss_pred CEEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEee
Q psy17032 83 THVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDK 162 (283)
Q Consensus 83 ~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~ 162 (283)
+.||++|+|||+++++++||+||+++++++++.++ +.. + ..++.+++|++|++.+.+++++.++++| .
T Consensus 83 ~~iI~~G~aGgl~~~~~~GDvvv~~~~i~~d~~~~---~~~-------p-~~~~~~~~d~~L~~~~~~~~~~~~~~~~-~ 150 (235)
T 1z34_A 83 KTIIRVGTCGAIDMDIHTRDIVIFTSAGTNSKINR---IRF-------M-DHDYPATASFDVVCALVDAAKELNIPAK-V 150 (235)
T ss_dssp CEEEEEEEEEECSTTCCTTCEEEEEEEEESCSHHH---HHT-------T-TSCCCCBCCHHHHHHHHHHHHHTTCCCE-E
T ss_pred CEEEEEEccccCCCCCCCCCEEEEcceeccCCccc---ccc-------C-CCCcCccCCHHHHHHHHHHHHHcCCCeE-E
Confidence 99999999999999999999999999999987321 111 1 1123468999999999999999999999 8
Q ss_pred eeEEEecCCccc--CHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHH
Q psy17032 163 GTAVCIEGPRFS--SRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKEN 239 (283)
Q Consensus 163 G~~~~~~Gp~fe--t~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~ 239 (283)
|++ ++||+|. ++++.++++++|+++||||+++++++|+++|+||++||.|||++++ ++..+.+++.+...+.
T Consensus 151 G~~--~s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~~~a~~~gi~~~~i~~IsD~~~~---~~~~~~~~~~~~~~~~ 224 (235)
T 1z34_A 151 GKG--FSTDLFYNPQTELAQLMNKFHFLAVEMESAGLFPIADLYGARAGCICTVSDHILH---HEETTAEERQNSFQNM 224 (235)
T ss_dssp EEE--EECSCSSCSCTHHHHHHHHTTCCEEESSHHHHHHHHHHTTCEEEEEEEEEEESSS---CCC-----HHHHHHHH
T ss_pred EEE--eecCcCcCCcHHHHHHHHHcCceEEechHHHHHHHHHHhCCcEEEEEEEEecCCC---CccCCHHHHHHHHHHH
Confidence 988 5889987 4556678889999999999999999999999999999999999865 3457788876654443
No 29
>1vhw_A Purine nucleoside phosphorylase; structural genomics, transferase; HET: ADN; 1.54A {Vibrio cholerae} SCOP: c.56.2.1 PDB: 1vhj_A* 3of3_A* 3occ_A* 1pw7_A* 1pr1_A* 1pr2_A* 1pr4_A* 1pr5_A* 1pr0_A* 1pr6_A* 3onv_A 1pk7_A* 1k9s_A* 1pke_A* 1pk9_A 3ooe_A 3ooh_A 1ecp_A 1a69_A 1oty_A* ...
Probab=100.00 E-value=1.3e-31 Score=239.96 Aligned_cols=217 Identities=15% Similarity=0.138 Sum_probs=163.7
Q ss_pred eEEEEeCCCCCCcccccc-cce-eeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHH-HHHHHcCCC
Q psy17032 7 KIGFIGGSGLNNPQILEN-AQE-VAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANI-WALKSVGCT 83 (283)
Q Consensus 7 ~igIIggsgl~~~~~l~~-~~~-~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~-~~l~~~Gv~ 83 (283)
++.|+.|... ..+.+.. ..+ .......+ +..+|+|+|+|++|+++ ++|+|+ ++++.++ ++++.+|++
T Consensus 17 ~~vl~~Gdp~-r~~~ia~~~l~~~~~~~~~~--~~~~~~G~~~g~~V~v~-~~G~G~------~~aa~~~~~l~~~~g~~ 86 (253)
T 1vhw_A 17 DVVLMPGDPL-RAKYIAENFLDNAVQVCDVR--NMFGYTGTYKGRRISVM-GHGMGI------PSCSIYVTELIKDYGVK 86 (253)
T ss_dssp SEEEECSCHH-HHHHHHHHHSEEEEEEECGG--GCCEEEEEETTEEEEEE-CCCSSH------HHHHHHHHHHHHHHCCC
T ss_pred CEEEEcCCHH-HHHHHHHHHhhcceeEeeeC--CeEEEEEEECCEEEEEE-eCCCCH------HHHHHHHHHHHHHcCCC
Confidence 7889988542 2233331 222 22122222 34799999999999999 699996 6666545 566889999
Q ss_pred EEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeee
Q psy17032 84 HVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKG 163 (283)
Q Consensus 84 ~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G 163 (283)
.||++|+|||+++++++||+||++++++..+ .+++.-+ + .++.+++|++|++.+.+++++.+++++ .|
T Consensus 87 ~iI~~G~aGgl~~~~~~GDvVi~~~~i~d~g---~~~~~~p-----~---~~~~~~~d~~L~~~l~~~~~~~~~~~~-~G 154 (253)
T 1vhw_A 87 KIIRVGSCGAVNEGIKVRDVVIGMGACTDSK---VNRIRFK-----D---HDFAAIADYKMVKAAEEAAKARGIDVK-VG 154 (253)
T ss_dssp EEEEEEEEEECSTTSCTTCEEEEEEEEESCS---HHHHHTT-----T---SBCCCBCCHHHHHHHHHHHHHTTCCCE-EE
T ss_pred EEEEEEeccCCCCCCCCCCEEEEcceEECCC---CcccccC-----C---CcccccCCHHHHHHHHHHHHHcCCCeE-EE
Confidence 9999999999999999999999999995433 1211101 0 123467999999999999999999999 89
Q ss_pred eEEEecCCcc--cCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHH
Q psy17032 164 TAVCIEGPRF--SSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVE 241 (283)
Q Consensus 164 ~~~~~~Gp~f--et~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~ 241 (283)
+++ +||+| +++++.++++++|+++||||+++++++|+++|+|+++||+|||++++ .+..+.+|+.+...+..
T Consensus 155 ~i~--s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~~~a~~~gi~~~~I~~IsD~~~~---~~~~~~~e~~~~~~~~~- 228 (253)
T 1vhw_A 155 NLF--SAELFYTPDPSMFDVMDKYGIVGVEMEAAGIYGVAAEYGAKALAICTVSDHIKT---GEQTTSEERQNTFNEMI- 228 (253)
T ss_dssp EEE--ECSCSSCSCTTHHHHHHHTTCCEEESSHHHHHHHHHHHTCEEEEEEEEEEETTT---CCCCCHHHHHHHHHHHH-
T ss_pred EEE--EeCccccCcHHHHHHHHHcCCcEEechHHHHHHHHHHcCCCEEEEEEEEccCCC---CccCCHHHHHHHHHHHH-
Confidence 984 77887 45666778899999999999999999999999999999999999865 45688888776655433
Q ss_pred HHHHHHHHHHHhc
Q psy17032 242 KITKLFVHIVPKI 254 (283)
Q Consensus 242 ~~~~ll~~~l~~l 254 (283)
++.++.+.++
T Consensus 229 ---~~ale~~~~~ 238 (253)
T 1vhw_A 229 ---EIALDSVLIG 238 (253)
T ss_dssp ---HHHHHHHHHH
T ss_pred ---HHHHHHHHhc
Confidence 4444555444
No 30
>3uaw_A PNP, purine nucleoside phosphorylase DEOD-type; necleoside phosphorylase I (NP-I) family, transferase; HET: ADN GOL; 1.20A {Bacillus cereus} PDB: 2ac7_A 3uav_A* 3uax_A* 1xe3_A 3uay_A* 3uaz_A* 4d8y_A 4d8x_A 4d8v_A 4d98_A 4d9h_A* 4da0_A* 4da6_A* 4da7_A* 4da8_A* 4dab_A* 4dae_A* 4dan_A* 4dao_A* 4dar_A*
Probab=99.98 E-value=2.5e-31 Score=235.62 Aligned_cols=174 Identities=17% Similarity=0.170 Sum_probs=142.1
Q ss_pred cccEEEEEECCeEEEEEeccCCCcccCCCccchHH-HHHHHHHcCCCEEEEecccccCCCCCCCCcEEEecccccccCCC
Q psy17032 38 SDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRA-NIWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTRTR 116 (283)
Q Consensus 38 ~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a-~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~ 116 (283)
+..+|+|+|+|++|+++ ++|+|+ ++++. ..++++.+|++.||++|+||||++++++||+||++++++..+..
T Consensus 44 ~~~~~~G~~~g~~v~v~-~~G~G~------~~aa~~~~~l~~~~g~~~iI~~G~aGgl~~~~~~GDvVi~~~~i~d~g~~ 116 (235)
T 3uaw_A 44 GMLGFTGTYKGKRVSVQ-GTGMGV------PSISIYVNELIQSYGVKNLIRVGTCGAIQKDVKVRDVIIAMTACTDSNMN 116 (235)
T ss_dssp GCCEEEEEETTEEEEEE-CCCSSH------HHHHHHHHHHHHHHCCCEEEEEEEEEECSTTSCTTCEEEEEEEEESCSHH
T ss_pred CEEEEEEEECCEEEEEE-eCCCCH------HHHHHHHHHHHHHCCCCEEEEEeeccCCCCCCCCCcEEEEChhhccCCCC
Confidence 34799999999999999 699986 66654 44567889999999999999999999999999999999644321
Q ss_pred cccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcc--cCHHHHHHHHHcCCcEEecCc
Q psy17032 117 IQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRF--SSRAESNLFRSWNAHLVNMTL 194 (283)
Q Consensus 117 ~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~f--et~aE~~~~~~~Gad~V~Me~ 194 (283)
+ .++. ..++.+++|++|++.+.++++++|+++| .|++ ++||+| +++++.++|+++|+++||||+
T Consensus 117 ~-~~~~----------~~~~~~~~d~~L~~~l~~~a~~~g~~~~-~G~~--~s~d~f~~~~~~~~~~~~~~g~~~veME~ 182 (235)
T 3uaw_A 117 R-LTFP----------GFDFAPAANFDLLKKAYDAGTEKGLHVR-VGNV--LTADVFYRESMDMVKKLGDYGVLAVEMET 182 (235)
T ss_dssp H-HHST----------TCCCCCBCCHHHHHHHHHHHHHHTCCEE-EEEE--EECSCSSCSCCHHHHHHHHTTCCEEESSH
T ss_pred c-cccC----------CCcccccCCHHHHHHHHHHHHHcCCCeE-EEEE--EEcCcCccCCHHHHHHHHHcCCcEEEccH
Confidence 1 1111 0122457899999999999999999999 8998 478988 667778888999999999999
Q ss_pred hHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHH
Q psy17032 195 VPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKT 235 (283)
Q Consensus 195 aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~ 235 (283)
++++++|+++|+|+++|++|||+... ++..+.+|..+.
T Consensus 183 aa~~~va~~~gi~~~~i~~ISD~~~~---~e~~~~~e~~~~ 220 (235)
T 3uaw_A 183 TALYTLAAKYGVNALSVLTVSDHIFT---GEETTSEERQTT 220 (235)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEETTT---CCBCCTGGGHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEecccCC---CCcCChHHHHHH
Confidence 99999999999999999999999754 344555555433
No 31
>3qpb_A Uridine phosphorylase; hexamer, NP-I superfamily, pyrimidine salvage pathway, uridi phosphorylase, transition state; HET: R1P; 1.82A {Streptococcus pyogenes serotype M6}
Probab=99.97 E-value=2.2e-31 Score=242.05 Aligned_cols=191 Identities=16% Similarity=0.195 Sum_probs=150.3
Q ss_pred eEEEEeCCCCCCcccccccceeeee-CCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCCEE
Q psy17032 7 KIGFIGGSGLNNPQILENAQEVAVD-TPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCTHV 85 (283)
Q Consensus 7 ~igIIggsgl~~~~~l~~~~~~~~~-~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~~i 85 (283)
++.|+.|... +.+.+....+.... .... ...+|+|+|+|++|+++ ++|+|+ ++++++++.|..+|++.|
T Consensus 46 ~~vil~Gdp~-r~~~ia~~~~~~~~~~~~r--~~~~~tG~~~g~~V~v~-~~G~G~------~~aa~~~~~L~~~g~~~i 115 (282)
T 3qpb_A 46 RYVIMPGDPK-RCAKIAEHFDNAVLVADSR--EYVTYTGTLNGEKVSVT-STGIGG------PSASIAMEELKLCGADTF 115 (282)
T ss_dssp SEEEEESCGG-GHHHHHTTSEEEEEEEEET--TEEEEEEEETTEEEEEE-CCCSSH------HHHHHHHHHHHHTTCCEE
T ss_pred CEEEECCCHH-HHHHHHHHhCCCEEEeccC--CeeEEEEEECCEEEEEE-eCCCCH------HHHHHHHHHHHHcCCCEE
Confidence 7889999653 33444333332211 1111 33689999999999999 699996 677777888888999999
Q ss_pred EEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeeeeE
Q psy17032 86 IVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKGTA 165 (283)
Q Consensus 86 I~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~ 165 (283)
|++|+||||++++++||+||+++++++++..+ +|. ...|+ ..+|++|++.+.+++++++++++ .|++
T Consensus 116 I~~G~aGgl~~~~~~GDvVi~~~ai~~dg~~~--~y~-------~~~~p---~~~d~~L~~~l~~~a~~~g~~~~-~G~~ 182 (282)
T 3qpb_A 116 IRVGTCGGIELDVKGGDIVIATGAIRMEGTSK--EYA-------PIEFP---AVADLEVTNALVNAAKKLGYTSH-AGVV 182 (282)
T ss_dssp EEEEEEEECSTTCCTTCEEEEEEEEEESSTGG--GTS-------CTTSC---EECCHHHHHHHHHHHHHHTCCEE-EEEE
T ss_pred EEeeeeecCCCCCCCCcEEEeeeeeecCCccc--ccC-------CCccC---CCCCHHHHHHHHHHHHHcCCCEE-EEEE
Confidence 99999999999999999999999999986432 221 11232 35899999999999999999999 9998
Q ss_pred EEec-----------CCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEE-EEEeeecCCC
Q psy17032 166 VCIE-----------GPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAA-VAMATDYDCW 220 (283)
Q Consensus 166 ~~~~-----------Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~-i~~vsd~a~~ 220 (283)
++.+ ||+|+++++.++|+++|+++||||+++++++|+++|+|+++ +++|+|.+.+
T Consensus 183 ~s~D~Fy~q~~~~~~~~~~e~~~~~~~~~~~Ga~aVEMEsaala~vA~~~gi~~~~il~visn~~~~ 249 (282)
T 3qpb_A 183 QCKDAFYGQHEPERMPVSYELLNKWEAWKRLGTKASEMESAALFVAASHLGVRCGSDFLVVGNQERN 249 (282)
T ss_dssp EEESCHHHHHCGGGSTTHHHHHHHHHHHHHTTCCEECSSHHHHHHHHHHHTCEEEEEEEEEEEHHHH
T ss_pred EEecceecccccccccccHhHHHHHHHHHHcCCeEEeccHHHHHHHHHHcCCCEEEEEEEEEccccc
Confidence 6432 34456778888899999999999999999999999999999 6789998754
No 32
>3phc_A Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.00A {Plasmodium falciparum} PDB: 1q1g_A* 1nw4_A* 3fow_A*
Probab=99.97 E-value=6.8e-32 Score=244.52 Aligned_cols=240 Identities=15% Similarity=0.134 Sum_probs=166.0
Q ss_pred eEEEEeCCCCCCccccccccee-ee-eCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCCE
Q psy17032 7 KIGFIGGSGLNNPQILENAQEV-AV-DTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCTH 84 (283)
Q Consensus 7 ~igIIggsgl~~~~~l~~~~~~-~~-~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~~ 84 (283)
+..|+.|... ..+.+....+. .. ...- ...+|+|+|+|++|++++ +|+|+ ++++..++.|..+|++.
T Consensus 18 ~~vll~GdP~-R~~~ia~~l~~~~~~~~~r---~~~~~tG~~~G~~V~v~~-~GiG~------psaai~~~eL~~~gv~~ 86 (275)
T 3phc_A 18 PVVLVVGDPG-RVDKIKVVCDSYVDLAYNR---EYKSVECHYKGQKFLCVS-HGVGS------AGCAVCFEELCQNGAKV 86 (275)
T ss_dssp SEEEEESCHH-HHHHHHTTSSEEEEEEEET---TEEEEEEEETTEEEEEEE-CCSSH------HHHHHHHHHHHTTTCCE
T ss_pred CEEEECCCHH-HHHHHHHHhccCeeeeeeC---CeEEEEEEECCEEEEEEE-CCCCh------HHHHHHHHHHHHCCCCE
Confidence 5677777442 22334333322 11 1121 337999999999999995 99995 56555677888899999
Q ss_pred EEEecccccCCCC-CCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeee
Q psy17032 85 VIVSTATGSLQEE-IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKG 163 (283)
Q Consensus 85 iI~tg~aG~l~~~-l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G 163 (283)
||++|+||||+|+ +++||+||+++++++++.+. .|. ...| ..++|++|++.+.++++++|++++ .|
T Consensus 87 iI~~GtaGgL~~~~i~~GDiVI~~~ai~~dg~~~--~y~-------~~~~---p~~~d~~L~~~l~~~a~~~g~~~~-~G 153 (275)
T 3phc_A 87 IIRAGSCGSLQPDLIKRGDICICNAAVREDRVSH--LLI-------HGDF---PAVGDFDVYDTLNKCAQELNVPVF-NG 153 (275)
T ss_dssp EEEEEEEEESCTTTCCTTCEEEEEEEEEESSHHH--HHS-------CTTS---CEECCHHHHHHHHHHHHHTTCCCE-EE
T ss_pred EEEeeeecCcccccCCCCcEEEEhheeccCCccc--ccC-------CCCc---CCcCCHHHHHHHHHHHHHcCCCeE-EE
Confidence 9999999999999 99999999999999986422 121 1122 256999999999999999999999 99
Q ss_pred eEEEecCCcccCHHH--HHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHH
Q psy17032 164 TAVCIEGPRFSSRAE--SNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVE 241 (283)
Q Consensus 164 ~~~~~~Gp~fet~aE--~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~ 241 (283)
++++.+++.++++++ .++|+++|+++||||+++++++|+++|+|+++|++|+|.....+ ....+.+ + ..+..+
T Consensus 154 ~v~s~D~Fy~~~~~~~k~~~~~~~Ga~aVEMEsaal~~vA~~~gi~~~~I~~V~~~~~~~~-~~~~~~~-~---~~~~~~ 228 (275)
T 3phc_A 154 ISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELATLMVIGTLRKVKTGGILIVDGCPFKWD-EGDFDNN-L---VPHQLE 228 (275)
T ss_dssp EEEEESCSSCCSSSCCSHHHHHHTTCCEEESSHHHHHHHHHHTTCEEEEEEEEEECGGGGG-GTCBCSS-C---CHHHHH
T ss_pred EEEEeCCCccCchhhHHHHHHHHcCCEEEECcHHHHHHHHHHcCCCEEEEEEEECCccccc-ccccchH-H---HHHHHH
Confidence 998888887788877 57889999999999999999999999999999999987642110 1112211 1 223444
Q ss_pred HHHHHHHHHHHhccccCChhHHHHHHhhhhhcCcCCC
Q psy17032 242 KITKLFVHIVPKIAAKDWTNEITELKSVVETSNMSPQ 278 (283)
Q Consensus 242 ~~~~ll~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 278 (283)
+..++..+++++|.+++- -.+.+.-+|...+|..
T Consensus 229 ~~~~ialeai~~L~~~~~---~~~~~~~~~~~~~~~~ 262 (275)
T 3phc_A 229 NMIKIALGACAKLATKYA---KGEFEAYVEQKLISEE 262 (275)
T ss_dssp HHHHHHHHHHHHHHHHHC-------------------
T ss_pred HHHHHHHHHHHHHHhhhc---cccHHHHHHHhhccHh
Confidence 566788888887753331 1134444444444443
No 33
>3u40_A Pnpase, purine nucleoside phosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: ADN; 2.05A {Entamoeba histolytica} SCOP: c.56.2.0 PDB: 3tl6_A*
Probab=99.97 E-value=8.3e-31 Score=233.36 Aligned_cols=204 Identities=17% Similarity=0.205 Sum_probs=155.3
Q ss_pred eEEEEeCCCCCCcccccc-c-ceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHH-HHHHHcCCC
Q psy17032 7 KIGFIGGSGLNNPQILEN-A-QEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANI-WALKSVGCT 83 (283)
Q Consensus 7 ~igIIggsgl~~~~~l~~-~-~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~-~~l~~~Gv~ 83 (283)
+.-|+.|... ..+.+.. . .+.......+ +..+|+|+|+|++|+++ ++|+|+ ++++..+ ++++.+|++
T Consensus 23 ~~vl~~Gdp~-R~~~iA~~~l~~~~~~~~~r--~~~~~tG~~~g~~V~v~-~~G~G~------~saai~~~eLi~~~gv~ 92 (242)
T 3u40_A 23 ETVLMAGDPL-RVKLLADTYLTDVVQYNSVR--GAVGYTGYYKGVKLSVQ-AHGMGM------PSIGIYAYELFNFYGVK 92 (242)
T ss_dssp SEEEEESCHH-HHHHHHHHHCEEEEEEECGG--GCCEEEEEETTEEEEEE-ECCSSH------HHHHHHHHHHHHHSCCC
T ss_pred CEEEEcCCHH-HHHHHHHHHhhCcEEEEEEC--CEEEEEEEECCEEEEEE-eCCCCH------HHHHHHHHHHHHHcCCC
Confidence 5667777432 2233332 1 2222223332 44799999999999999 599996 6666444 455779999
Q ss_pred EEEEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeee
Q psy17032 84 HVIVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKG 163 (283)
Q Consensus 84 ~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G 163 (283)
.||++|+|||+++++++||+||+++++++++.... +. . +. ++.+++|++|++.+.++++++|++++ .|
T Consensus 93 ~iI~~GtaGgl~~~~~~GDvVi~~~~i~~~~~~~~--~~-~-----~~---~~~~~~d~~L~~~l~~~a~~~g~~~~-~G 160 (242)
T 3u40_A 93 RIIRIGSAGAFDESLKLGDIVIGMGACYDSNFERQ--YD-I-----PG---KYSCIADFQLCREAVDAAEKLGYRYK-VG 160 (242)
T ss_dssp EEEEEEEEEECSTTCCTTCEEEEEEEEESCSSSGG--GT-C-----SS---BCCEECCHHHHHHHHHHHHHTTCCEE-EE
T ss_pred EEEEEEeeeCCCCCCCCCCEEEecceeecCCcccc--cc-C-----CC---cccccCCHHHHHHHHHHHHHcCCceE-Ee
Confidence 99999999999999999999999999987653221 10 0 11 22357999999999999999999999 99
Q ss_pred eEEEecCCcc-cCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeee-cCCCcCCCCccCHHHHHHHHH
Q psy17032 164 TAVCIEGPRF-SSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD-YDCWRDTGNKVCVADVLKTFK 237 (283)
Q Consensus 164 ~~~~~~Gp~f-et~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd-~a~~~~~~~~~~~~e~~~~~~ 237 (283)
+++ ++|.| +++++.++|+++|+++||||+++++++|+++|+|+++|++||| .... ++.++.+|..+...
T Consensus 161 ~i~--s~d~fy~~~~~~~~~~~~g~~~veMEsaal~~va~~~gi~~~~i~~ISD~~~~~---~e~~~~~e~~~~~~ 231 (242)
T 3u40_A 161 NIY--SANYFYDDGDHSGAWKKMGVLAVEMEAAALYMIAARARKQALCMLTISDLCYGS---GEKMTAEERRTKFT 231 (242)
T ss_dssp EEE--ECSCSSCSSCCCHHHHHTTCCEEESSHHHHHHHHHHHTCEEEEEEEEEEESSTT---CCBCCHHHHHHTTH
T ss_pred EEE--EeCCCcCCHHHHHHHHHcCCcEEEchHHHHHHHHHHcCCCEEEEEEEEcCcccC---CCcCCHHHHHHHHH
Confidence 985 66776 7887788899999999999999999999999999999999999 6422 35677887755444
No 34
>1ybf_A AMP nucleosidase; structural genomics, protein structure initiative, PSI, NEW research center for structural genomics, nysgxrc; 2.90A {Bacteroides thetaiotaomicron} SCOP: c.56.2.1
Probab=99.97 E-value=1.6e-31 Score=241.20 Aligned_cols=224 Identities=13% Similarity=0.059 Sum_probs=164.8
Q ss_pred ceEEEEeCCCCCCcccccccceeeeeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCCEE
Q psy17032 6 IKIGFIGGSGLNNPQILENAQEVAVDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCTHV 85 (283)
Q Consensus 6 ~~igIIggsgl~~~~~l~~~~~~~~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~~i 85 (283)
++++||+|++. +.+.+....+.... +. ..+|. +++|++|+++ ++|+|+ ++++.++++|+.+|++.|
T Consensus 26 ~~~vii~g~p~-~~~~ia~~~~~~~~---~~-~~~~~--~~~g~~V~v~-~~G~G~------~~aa~~~~~l~~~gv~~i 91 (268)
T 1ybf_A 26 EPYILLTNFSH-YLHVFAEHYGVPIV---GE-HTSMP--NASAEGVTLI-NFGMGS------ANAATIMDLLWAIHPKAV 91 (268)
T ss_dssp CSEEEEESCHH-HHHHHHHHHTCCCB---TT-TSSSC--BCCCSSEEEE-ECCSCH------HHHHHHHHHTTTTCCSEE
T ss_pred CCEEEEcCCHH-HHHHHHHhccccEE---cc-CCcee--eECCeEEEEE-ECCCCH------HHHHHHHHHHHHcCCCEE
Confidence 58999999752 22333222221111 21 22444 8899999999 599986 444434789999999999
Q ss_pred EEecccccCCCCCCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeeeeE
Q psy17032 86 IVSTATGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKGTA 165 (283)
Q Consensus 86 I~tg~aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~ 165 (283)
|++|+|||+++++++||+||+++++++++.+. +|.. ..++ .++|++|++.+.+++++++++++ .|++
T Consensus 92 I~~GtaGgl~~~i~~GDvVi~~~~i~~d~~~~--~~~~-------~~~p---~~~~~~l~~~l~~~a~~~~~~~~-~G~~ 158 (268)
T 1ybf_A 92 IFLGKCGGLKLENALGDYLLPIAAIRGEGTSN--DYLP-------EEVP---SLPSFSVLRAISSAIQNKGKDYW-TGTV 158 (268)
T ss_dssp EEEEEECCSSCTTCTTCEEEEEEEEECSSTGG--GTSC-------TTSC---BCCCHHHHHHHHHHHHTTTCCEE-EEEE
T ss_pred EEEEeeecCCCCCCCCcEEEEhhheecCCCcc--cccC-------CccC---CCCCHHHHHHHHHHHHHcCCCEE-EEEE
Confidence 99999999999999999999999999987532 2211 1232 46899999999999999999999 8999
Q ss_pred EEecCCcccCHHH-HHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHHHHH
Q psy17032 166 VCIEGPRFSSRAE-SNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKIT 244 (283)
Q Consensus 166 ~~~~Gp~fet~aE-~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~~~~ 244 (283)
++.+++.++|++| .++|+++|+++||||+++++++|+++|+|+++|++|||++... +...+.++..+..++...++.
T Consensus 159 ~s~d~f~~e~~~e~~~~l~~~g~~~veMEsaal~~~a~~~gv~~~~i~~VsD~~~~~--~g~~~~~~~~~~~~~~~~~~i 236 (268)
T 1ybf_A 159 YTTNRRVWEYDEKFKDYLRSTHASGVDMETATLMTVGFANKIPMGALLLISDRPMFP--EGVKTEESDQLVTDNFAEEHL 236 (268)
T ss_dssp EECSCCCCTTCHHHHHHHHHTTCSEEESSHHHHHHHHHHTTCCEEEEEEECSCSSCC--SSCCCCCC------CCHHHHH
T ss_pred EEeCCCccCCCHHHHHHHHHcCCeEEecCHHHHHHHHHHcCCCEEEEEEEEcCCCCc--ccccCcccchhHHHHHHHHHH
Confidence 7555555677778 5678889999999999999999999999999999999998642 113333333333334445667
Q ss_pred HHHHHHHHhccccC
Q psy17032 245 KLFVHIVPKIAAKD 258 (283)
Q Consensus 245 ~ll~~~l~~l~~~~ 258 (283)
++.++.+++|.+..
T Consensus 237 ~iale~~~~l~~~~ 250 (268)
T 1ybf_A 237 MLGIDALEIIRENK 250 (268)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCc
Confidence 78888888776444
No 35
>3mb8_A Purine nucleoside phosphorylase; PNP, immucillin H, IMMH, TR; HET: IMH; 1.90A {Toxoplasma gondii}
Probab=99.97 E-value=1.5e-30 Score=236.01 Aligned_cols=240 Identities=15% Similarity=0.133 Sum_probs=163.1
Q ss_pred eEEEEeCCCCCCcccccccceee--eeCCCCCCcccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCCE
Q psy17032 7 KIGFIGGSGLNNPQILENAQEVA--VDTPYGAPSDVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCTH 84 (283)
Q Consensus 7 ~igIIggsgl~~~~~l~~~~~~~--~~~~~G~~~~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~~ 84 (283)
+..|+.|... ..+.+....+.. +...- ...+|+|+|+|++|++++ +|+|+ ++++..++.|..+|++.
T Consensus 22 ~~vll~GdP~-R~~~iA~~l~~~~~~~~~r---~~~~ytG~~~G~~V~v~~-~GiG~------psaai~~~eLi~~gv~~ 90 (279)
T 3mb8_A 22 PVVIIVGDPA-RTEEVANMCEKKQELAYNR---EYRSFRVVYDSQPITVIS-HGIGC------PGTSIAIEELAYLGAKV 90 (279)
T ss_dssp SEEEEESSHH-HHHHHHTTSSEEEEEEEET---TEEEEEEEETTEEEEEEE-CCSSH------HHHHHHHHHHHHTTCCE
T ss_pred CEEEECCCHH-HHHHHHHHhccceeeeeec---CeEEEEEEECCEEEEEEE-CCCCH------HHHHHHHHHHHHCCCCE
Confidence 5677777442 223333332221 11122 336999999999999995 99995 56665677787899999
Q ss_pred EEEecccccCCCC-CCCCcEEEecccccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHcCCcEEeee
Q psy17032 85 VIVSTATGSLQEE-IQPGDLVILDSFIDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKELGFKFHDKG 163 (283)
Q Consensus 85 iI~tg~aG~l~~~-l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G 163 (283)
||++|+||||+++ +++||+||+++++++++.+. .|. ...| ..++|++|++.+.+++++++++++ .|
T Consensus 91 iIriGtaGgL~~~~l~~GDiVI~~~ai~~dg~~~--~y~-------~~~~---p~~~d~~L~~~l~~~a~~~g~~~~-~G 157 (279)
T 3mb8_A 91 IIRAGTCGSLKPKTLKQGDVCVTYAAVNETGLIS--NIL-------PEGF---PCVATPHVYQALMDAAKELGIEAA-SG 157 (279)
T ss_dssp EEEEEEEEESCTTTSCTTCEEEEEEEEECCHHHH--HHS-------CTTC---CEECCHHHHHHHHHHHHHHTCCCE-EE
T ss_pred EEEeecccCcCcccCCCCCEEEeeeeEcCCCCcc--ccC-------CCcc---CCcCCHHHHHHHHHHHHHcCCCeE-EE
Confidence 9999999999999 99999999999999886422 121 1122 357999999999999999999999 99
Q ss_pred eEEEecCCcccCHHH--HHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHH
Q psy17032 164 TAVCIEGPRFSSRAE--SNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVE 241 (283)
Q Consensus 164 ~~~~~~Gp~fet~aE--~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~ 241 (283)
++++.+++..+++++ .++|+++|++ ||||+++++++|+++|+|+++|++|||.......+...+..++.. +..+
T Consensus 158 ~v~S~D~Fy~e~~~~~k~~~~~~~Ga~-VEMEsaala~vA~~~gv~~~~I~~VSd~~~~~~~~~~~~~~~~~~---~~~~ 233 (279)
T 3mb8_A 158 IGVTQDYFYQNGILPSKLEMYSKCCDV-IDMEMSGVLGLCQARGIATCGILAVDGSPLQWDEGDYDATGVKAT---TGKE 233 (279)
T ss_dssp EEEECSCSCCCCSSCCCHHHHHTTCSE-EESSHHHHHHHHHHTTCEEEEEEEECBCGGGGGGTCBCSSSHHHH---HHHH
T ss_pred EEEEECCCccCchHhHHHHHHHHcCCE-EecCHHHHHHHHHHcCCCEEEEEEEECCcccccccccccchHHHH---HHHH
Confidence 997665555577766 6788999999 999999999999999999999999998642211011222223332 2333
Q ss_pred HHHHHHHHHHHhccccCChhHHHHHHhhhhhcCcCCC
Q psy17032 242 KITKLFVHIVPKIAAKDWTNEITELKSVVETSNMSPQ 278 (283)
Q Consensus 242 ~~~~ll~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 278 (283)
+..++..+++.+|.++... +.+.-+|...+|..
T Consensus 234 ~~i~ialea~~~L~~~~~~----~~~~~~~~~~~~~~ 266 (279)
T 3mb8_A 234 NMVKITLKACANLRRQYKG----EFEAYVEQKLISEE 266 (279)
T ss_dssp HHHHHHHHHHHHHHHTC--------------------
T ss_pred HHHHHHHHHHHHHHHcCch----hHHHHHHHhhccHh
Confidence 4556777777777666555 44444555445443
No 36
>1t8s_A AMP nucleosidase; alpha-beta-alpha sandwich, alpha-beta fold, hydrolase; HET: FMP; 2.60A {Escherichia coli} SCOP: c.56.2.1 PDB: 1t8r_A* 1t8w_A 1t8y_A 2guw_A
Probab=99.96 E-value=3.7e-29 Score=240.94 Aligned_cols=203 Identities=11% Similarity=0.061 Sum_probs=156.2
Q ss_pred eCCCCCCc-ccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHHHHcCCCEEEEecccccCCCCCCCCcEEEeccc
Q psy17032 31 DTPYGAPS-DVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSF 109 (283)
Q Consensus 31 ~~~~G~~~-~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~ 109 (283)
+++|+.++ ..+++|+++|++|+++ ++|+|+ +|++++++.|+.+|++.||++|+||||++++++||+||++++
T Consensus 252 dtp~~~~~~~~~~~G~~~G~~VvVv-~tGmG~------~nAAi~~~eL~~~gvk~II~vGtAGgL~~di~lGDVVIa~~a 324 (484)
T 1t8s_A 252 DLAWKKHQMPAWHLITADGQGITLV-NIGVGP------SNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVLAHAY 324 (484)
T ss_dssp TTHHHHCSSCEEEEEETTSCCEEEE-ECCSSH------HHHHHHHHHHGGGCCSEEEECCEEEECSTTCCTTCEEEEEEE
T ss_pred ccccccCCCceEEEEEECCEEEEEE-eCCCCh------HHHHHHHHHHHHcCCCEEEEEEEeeccCCCCcCCEEEEEeeE
Confidence 55665444 3899999999999999 599995 788877888899999999999999999999999999999999
Q ss_pred ccccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHH--------cCCcEEeeeeEEEecCCccc--C--HH
Q psy17032 110 IDRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKE--------LGFKFHDKGTAVCIEGPRFS--S--RA 177 (283)
Q Consensus 110 i~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~--------~g~~~~~~G~~~~~~Gp~fe--t--~a 177 (283)
+++++.. +.|... .+ .++++.++...+.+++++ +++++| .|++ ++||+|. + ++
T Consensus 325 i~~Dg~~--~~y~~~-------~~---p~pa~~~l~~~L~~aA~~~~~~~g~~lg~~v~-~G~i--~SgD~Fy~E~r~~~ 389 (484)
T 1t8s_A 325 LRDDHVL--DAVLPP-------DI---PIPSIAEVQRALYDATKLVSGRPGEEVKQRLR-TGTV--VTTDDRNWELRYSA 389 (484)
T ss_dssp EEECCTT--TTTSCT-------TS---CCCCCHHHHHHHHHHHHHHSSCCGGGGGGTEE-EEEE--EEESCTTGGGGHHH
T ss_pred EECCCCc--ccccCC-------CC---CCCCCHHHHHHHHHHHHHHhhhcccccCCceE-EEEE--EEcCccccccCCHH
Confidence 9998743 223211 11 247788888888888877 478899 8998 5799994 3 55
Q ss_pred HHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17032 178 ESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIAAK 257 (283)
Q Consensus 178 E~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~~~~~ll~~~l~~l~~~ 257 (283)
+.++++.+|+++||||+++++++|+++|+|+++|++|||++++.....+.+++++.+. +.+++.++..+++++|.+.
T Consensus 390 ~~~~~~~~GalaVEMEsAAla~vA~~~gvp~l~Ir~VSD~a~~~e~~~~~~~~~~~~~---a~~~ai~iaLeai~~L~~~ 466 (484)
T 1t8s_A 390 SALRFNLSRAVAIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEG---AISEHLQIGIRAIDLLRAE 466 (484)
T ss_dssp HHHHHHHHTEEEEESSHHHHHHHHHHTTCCEEEEEEEEECTTSSCCC----------C---HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCeEEeccHHHHHHHHHHcCCCEEEEEEEEecCCcccccccccHHHHHHH---HHHHHHHHHHHHHHHHHhC
Confidence 6677888999999999999999999999999999999999876422234566776553 4456677888888887644
Q ss_pred C
Q psy17032 258 D 258 (283)
Q Consensus 258 ~ 258 (283)
.
T Consensus 467 ~ 467 (484)
T 1t8s_A 467 G 467 (484)
T ss_dssp T
T ss_pred c
Confidence 4
No 37
>3euf_A Uridine phosphorylase 1; nucleoside phosphorylase, uridine rescue, 5- benzylacyclouridine, alternative splicing, glycosyltransferase, transferase; HET: BAU; 1.90A {Homo sapiens} PDB: 3eue_A* 3nbq_A 3ku4_A 3kuk_A* 3kvr_A 3kvy_A
Probab=99.94 E-value=2.2e-26 Score=212.80 Aligned_cols=191 Identities=14% Similarity=0.122 Sum_probs=146.1
Q ss_pred cEEEE---EECCeEEEEEeccCCCcccCCCccchHHHH-HHHHH---cCCC--EEEEecccccCCCCCCCCcEEEecccc
Q psy17032 40 VLLQG---TIQGVDCVILARHGRKHTINPSNVNYRANI-WALKS---VGCT--HVIVSTATGSLQEEIQPGDLVILDSFI 110 (283)
Q Consensus 40 ~~~~G---~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~-~~l~~---~Gv~--~iI~tg~aG~l~~~l~~GDiVi~~d~i 110 (283)
.+++| +|+|++|++++ +|+|. ++++..+ ++++. +|++ .||++|+|||| ++++||+||++..+
T Consensus 107 ~~~tG~y~~ykG~~Vsv~s-tGIG~------psaaI~~~ELi~~~~~~gv~~~~iIriGtaGgl--~l~vGDvVIa~~av 177 (328)
T 3euf_A 107 CAGTDRYAMYKVGPVLSVS-HGMGI------PSISIMLHELIKLLYYARCSNVTIIRIGTSGGI--GLEPGTVVITEQAV 177 (328)
T ss_dssp TTTCCSCCEEEETTEEEEE-CCSSH------HHHHHHHHHHHHHHHHTTCBSCEEEEEEEEEES--SSCTTCEEEEEEEE
T ss_pred EEEecceeEECCEEEEEEE-CCCCH------HHHHHHHHHHHHhhhhcCCCccEEEEEeeecCc--CCcCCcEEEeccee
Confidence 46678 89999999995 99995 6666444 44454 6999 99999999999 69999999999999
Q ss_pred cccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHc-CCcEEeeeeEEEecCCcccCHH------------
Q psy17032 111 DRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKEL-GFKFHDKGTAVCIEGPRFSSRA------------ 177 (283)
Q Consensus 111 ~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~-g~~~~~~G~~~~~~Gp~fet~a------------ 177 (283)
+.++.... +... .|. .+.+....|++|.+.+.++++++ +++++ .|++ .++|+|....
T Consensus 178 ~~d~t~~~--~~~~----~g~-~~~~p~~aD~~L~~~l~~aa~~~~~~~~~-~G~~--~S~D~Fy~~q~r~~~~~~~~~~ 247 (328)
T 3euf_A 178 DTCFKAEF--EQIV----LGK-RVIRKTDLNKKLVQELLLCSAELSEFTTV-VGNT--MCTLDFYEGQGRLDGALCSYTE 247 (328)
T ss_dssp CTTSCSEE--EEEE----TTE-EEEEECCCCHHHHHHHHHHHHHHCSSCEE-EEEE--EECSCSSGGGTCSCSSBCCSCH
T ss_pred cCCCccch--hhhh----cCC-CCccCCCCCHHHHHHHHHHHHhccCCCeE-EEEe--eccCccccCccccccccccchh
Confidence 86653211 1000 010 01122568999999999999998 99999 9998 5889996432
Q ss_pred ----H-HHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17032 178 ----E-SNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVP 252 (283)
Q Consensus 178 ----E-~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~~~~~ll~~~l~ 252 (283)
+ .+.|+++|+.+||||+++++++|+.+|+|+++|++|+|+.... ++..+++|+++.+.++ ..+++.++|+
T Consensus 248 ~~k~~~~~~~~~~gv~avEMEsAAla~va~~~gv~a~~I~~isdnr~~g--e~~~~~~e~l~~~~~~---~~~~v~~~ik 322 (328)
T 3euf_A 248 KDKQAYLEAAYAAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEG--DQISSPRNVLSEYQQR---PQRLVSYFIK 322 (328)
T ss_dssp HHHHHHHHHHHHTTEEEEESSHHHHHHHHHHTTCEEEEEEEEEEETTSC--SSCCSCHHHHHHHHTH---HHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCEEEehHHHHHHHHHHHcCCcEEEEEEEEccccCC--ccCCCcHHHHHHHHHH---HHHHHHHHHH
Confidence 1 3346679999999999999999999999999999999876432 4566788888766665 4468888887
Q ss_pred hc
Q psy17032 253 KI 254 (283)
Q Consensus 253 ~l 254 (283)
++
T Consensus 323 ~~ 324 (328)
T 3euf_A 323 KK 324 (328)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 38
>3p0f_A Uridine phosphorylase 2; transferase; HET: BAU; 1.54A {Homo sapiens} PDB: 3p0e_A* 2xrf_A
Probab=99.93 E-value=3e-26 Score=209.54 Aligned_cols=190 Identities=15% Similarity=0.110 Sum_probs=143.2
Q ss_pred cEEEE---EECCeEEEEEeccCCCcccCCCccchHHHH-HHHHHc-----CCCEEEEecccccCCCCCCCCcEEEecccc
Q psy17032 40 VLLQG---TIQGVDCVILARHGRKHTINPSNVNYRANI-WALKSV-----GCTHVIVSTATGSLQEEIQPGDLVILDSFI 110 (283)
Q Consensus 40 ~~~~G---~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~-~~l~~~-----Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i 110 (283)
.+|+| +|+|++|++++ ||+|. ++++..+ ++++.+ +++.||++|+||||+ +++||+||++..+
T Consensus 78 ~~~tG~y~~ykG~~Vsv~~-tGiG~------psaaI~~~ELi~~~~~~~~~~~~iIriGtaGgl~--l~vGDvVIa~~av 148 (297)
T 3p0f_A 78 CAGTDRYCMYKTGPVLAIS-HGMGI------PSISIMLHELIKLLHHARCCDVTIIRIGTSGGIG--IAPGTVVITDIAV 148 (297)
T ss_dssp CTTSSSCCEEEETTEEEEE-CCSSH------HHHHHHHHHHHHHHHHTTCBSCEEEEEEEEEESS--SCTTCEEEEEEEE
T ss_pred EEEEEEEeeECCeEEEEEE-CCCCH------HHHHHHHHHHHHhccccccCcceEEEEEeecccc--ccCCcEEeechhh
Confidence 45566 58999999995 99995 6666444 444544 266999999999999 9999999999998
Q ss_pred cccCCCcccccCCCCCCCCCcccCCCCCCCCHHHHHHHHHHHHHc-CCcEEeeeeEEEecCCcccCHH------------
Q psy17032 111 DRTRTRIQTFFDGSENSPNGVLHIPMEPAFDNSTRQIIIDSLKEL-GFKFHDKGTAVCIEGPRFSSRA------------ 177 (283)
Q Consensus 111 ~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~-g~~~~~~G~~~~~~Gp~fet~a------------ 177 (283)
+.... +. +.+.. .+ ......+.+|++|.+.+.++++++ ++++| .|.+ .++|+|....
T Consensus 149 ~~~~~-~~--~~~~~---~~-~~~~~~~~ad~~L~~~l~~aa~~~~~~~~~-~G~~--~S~D~Fy~~q~r~~~~~~~~~~ 218 (297)
T 3p0f_A 149 DSFFK-PR--FEQVI---LD-NIVTRSTELDKELSEELFNCSKEIPNFPTL-VGHT--MCTYDFYEGQGRLDGALCSFSR 218 (297)
T ss_dssp CTTSC-SE--EEEEE---TT-EEEEEECBCCHHHHHHHHHHHHTSTTCCEE-EEEE--EECSCSSGGGTCSSSSCCCSCH
T ss_pred hcccc-cc--ccccc---cC-cccccccCCCHHHHHHHHHHHHhcCCCCeE-EEEE--EECCccccCCcccccccccchh
Confidence 63111 10 00000 00 001113568999999999999998 99999 9998 5889996432
Q ss_pred -----HHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17032 178 -----ESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVP 252 (283)
Q Consensus 178 -----E~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~~~~~ll~~~l~ 252 (283)
..+.|+++|+.+||||+++++++|+.+|+|+++|++|+|+.... ++..+++||++.+.+++. +|+.++|+
T Consensus 219 ~~k~~~~~~~~~~gv~avEMEsAAl~~va~~~gv~a~~i~~isdnr~~~--~~~~~~~~~~~~~~~~~~---~lv~~~i~ 293 (297)
T 3p0f_A 219 EKKLDYLKRAFKAGVRNIEMESTVFAAMCGLCGLKAAVVCVTLLDRLDC--DQINLPHDVLVEYQQRPQ---LLISNFIR 293 (297)
T ss_dssp HHHHHHHHHHHHHTEEEEESSHHHHHHHHHHTTCEEEEEEEEEEETTTC--SSCCCCHHHHHHHHTHHH---HHHHHHHH
T ss_pred hhHHHHHHHHHHcCcEEEehHHHHHHHHHHHcCCcEEEEEEEEcCccCC--CcccChHHHHHHHHHHHH---HHHHHHHH
Confidence 13456778999999999999999999999999999999886442 567788999998877654 68888887
Q ss_pred h
Q psy17032 253 K 253 (283)
Q Consensus 253 ~ 253 (283)
+
T Consensus 294 ~ 294 (297)
T 3p0f_A 294 R 294 (297)
T ss_dssp H
T ss_pred H
Confidence 5
No 39
>3bje_A Nucleoside phosphorylase, putative; uridine phosphorylase, structural medical structural genomics of pathogenic protozoa consorti MSGPP; HET: R1P; 1.44A {Trypanosoma brucei}
Probab=99.92 E-value=1.9e-24 Score=201.35 Aligned_cols=195 Identities=13% Similarity=0.114 Sum_probs=140.8
Q ss_pred ccEEEEEECCeEEEEEeccCCCcccCCCccchHHHHHHH-HH--c-------------------------CCCEEEEecc
Q psy17032 39 DVLLQGTIQGVDCVILARHGRKHTINPSNVNYRANIWAL-KS--V-------------------------GCTHVIVSTA 90 (283)
Q Consensus 39 ~~~~~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~a~~~~l-~~--~-------------------------Gv~~iI~tg~ 90 (283)
..+|+|+|+|++|++++ +|+|. .|++..+..| .. + |++.||++|+
T Consensus 76 ~~~~tG~ykG~~Vsv~s-tGmG~------psaaI~~~ELi~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~iIrvGT 148 (349)
T 3bje_A 76 IRFATGTYKGTPVTVIS-TGMGV------DNIEIVLNEIHALKEYDMERGQWRHRKGDADAPSAGPFFDPSTMKIIRLGT 148 (349)
T ss_dssp EEEEEEEETTEEEEEEE-CCSSH------HHHHHHHHHHHHHHHEETTTTEECBCTTCTTSCTTCCBCCGGGCEEEEEEE
T ss_pred eEEEEEEECCEEEEEEE-CCCCH------HHHHHHHHHHHHHhhcccccccccccccccccccccccccCCCcEEEEeec
Confidence 36999999999999995 99995 6655444444 43 4 6999999999
Q ss_pred cccCCCCCCCCcEEEecccccccCCCcccccCCCCCCC---------C--C-cc---cCCCCCCCCHHHHHHHHHHHHHc
Q psy17032 91 TGSLQEEIQPGDLVILDSFIDRTRTRIQTFFDGSENSP---------N--G-VL---HIPMEPAFDNSTRQIIIDSLKEL 155 (283)
Q Consensus 91 aG~l~~~l~~GDiVi~~d~i~~~~~~~~t~~~~~~~~~---------~--g-~~---~~~~~~~~d~~L~~~~~~~a~~~ 155 (283)
||||++++++||+||++..+++++.. ++|....-+. + + .. ..++..++|++|++.+.++++++
T Consensus 149 ~Ggl~~~l~vGdvVI~~~ai~~Dg~~--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ad~~L~~~l~~aa~~~ 226 (349)
T 3bje_A 149 CGSPAESVPPLALAVTRHAIGMDNTS--LYYSAGTRETSKDQQEIRRIVREQTGLRAIDIYTSMAHPNITKSICAACDAH 226 (349)
T ss_dssp EEECCTTSCTTCEEEEEEEEECSCGG--GGGTTTTSCCCHHHHHHHHHHHHHSGGGGSCCEEEECCHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCCEEEEeeeEeccCcc--cccccccccccccchhhhcccccccccCCCCcccCcCCHHHHHHHHHHHHHc
Confidence 99999999999999999999998853 4443210000 0 0 00 01223578999999999999988
Q ss_pred C---------CcEEeeeeEEEecCCcccC---------------HHHHHHHH---------HcCCcEEecCchHHHHHHH
Q psy17032 156 G---------FKFHDKGTAVCIEGPRFSS---------------RAESNLFR---------SWNAHLVNMTLVPEVVLAK 202 (283)
Q Consensus 156 g---------~~~~~~G~~~~~~Gp~fet---------------~aE~~~~~---------~~Gad~V~Me~aaea~vA~ 202 (283)
+ .+++ .|+++ ++|.|.. +++.+.|+ ++|+++||||+++++++|+
T Consensus 227 ~~~~~~~~~~~~~~-~G~t~--S~D~Fy~~q~r~~grf~~~~~~~~~~~kl~~~~~~~~~~~~gv~~vEMEsaal~~la~ 303 (349)
T 3bje_A 227 NAATGSEADKQQYV-IGTTA--TASGFYGCQGRRVGRFMKHLTVPNMVEELGSLKFNLSNGVEVVTNIEMETSAICYLSD 303 (349)
T ss_dssp HHTCCCGGGCCCEE-EEEEE--ECSSSSGGGTCCCGGGGGGCSSTTHHHHHHHCCEEETTEEECEEEEESSHHHHHHHHH
T ss_pred CCccccccccccEE-EEEEE--ECCccccCCcccccccccccccHHHHHHHHHhhhcchhhhcCcEEEECcHHHHHHHHH
Confidence 7 8999 89874 6666542 33344554 6799999999999999999
Q ss_pred HcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q psy17032 203 EAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 251 (283)
Q Consensus 203 ~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~~~~~ll~~~l 251 (283)
.+|+|+++|++|||.... .+..++++..+.. ..++.++.++.+
T Consensus 304 ~~g~~a~~i~~Vsdn~~~---~~~~~~~~~~~~~---~~~~i~~aLea~ 346 (349)
T 3bje_A 304 MLGYQAGAACVVVSKRVG---EKKMFLGDQLDAA---MKRCIKIILEAL 346 (349)
T ss_dssp HHTCEEEEEEEEEEESST---TCEECCTHHHHHH---HHHHHHHHHHHH
T ss_pred HcCCCEEEEEEEEccCCC---CccccchhHHHHH---HHHHHHHHHHHH
Confidence 999999999999998753 2334455444332 233444444444
No 40
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=56.04 E-value=53 Score=29.68 Aligned_cols=90 Identities=16% Similarity=0.199 Sum_probs=56.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEe
Q psy17032 135 PMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMA 214 (283)
Q Consensus 135 ~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~v 214 (283)
+.+.++|+.+++.++++|++.|++++ ..+ .+|+- -|.+ ..+ .....|+|.+.|..-
T Consensus 262 d~~~~~~~~l~~~l~~~a~~~gIp~q-~~~---~~g~g-GtDa--~~i-----------------~~a~~Gipt~~Igvp 317 (354)
T 2vpu_A 262 DVGPNINPKLRAFADEVAKKYEIPLQ-VEP---SPRPT-GTDA--NVM-----------------QINKEGVATAVLSIP 317 (354)
T ss_dssp EESTTSCHHHHHHHHHHHHHTTCCCE-EEE---CCSCC-SSTH--HHH-----------------HTSTTCCEEEEEEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHcCCCcE-EEe---CCCCC-ccHH--HHH-----------------HHhcCCCCEEEECcc
Confidence 34688999999999999999999988 332 12210 1221 111 111258888888877
Q ss_pred eecCCCcCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q psy17032 215 TDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIAAKD 258 (283)
Q Consensus 215 sd~a~~~~~~~~~~~~e~~~~~~~~~~~~~~ll~~~l~~l~~~~ 258 (283)
+-+.... .+.++.+++.. ..+++.++++++.++.
T Consensus 318 ~~~~Hs~--~E~~~~~D~~~--------~~~ll~~~l~~l~~~~ 351 (354)
T 2vpu_A 318 IRYMHSQ--VELADARDVDN--------TIKLAKALLEELKPMD 351 (354)
T ss_dssp EBSTTST--TCEEEHHHHHH--------HHHHHHHHHHHCCCCC
T ss_pred cccCcCc--ceEeeHHHHHH--------HHHHHHHHHHhccHhh
Confidence 6654322 35566666543 3458888888876543
No 41
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=54.64 E-value=41 Score=28.62 Aligned_cols=73 Identities=14% Similarity=0.067 Sum_probs=44.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHH---HHHHHcCCcEEecCc------hHHHHHHHHc
Q psy17032 134 IPMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAES---NLFRSWNAHLVNMTL------VPEVVLAKEA 204 (283)
Q Consensus 134 ~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~---~~~~~~Gad~V~Me~------aaea~vA~~~ 204 (283)
++...+|-..+.+-+.+.+++.|+.+. +. .+ ......+. +.+...++|.+=... .+....+++.
T Consensus 10 ~~~~~~~~~~~~~gi~~~a~~~g~~~~----~~-~~--~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~ 82 (313)
T 3m9w_A 10 DDLRLERWQKDRDIFVKKAESLGAKVF----VQ-SA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 82 (313)
T ss_dssp SCCSSSTTHHHHHHHHHHHHHTSCEEE----EE-EC--TTCHHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTT
T ss_pred CCCCChHHHHHHHHHHHHHHHcCCEEE----EE-CC--CCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHC
Confidence 344567888999999999999998776 11 11 22222222 334444555443322 2566778889
Q ss_pred CCcEEEEEE
Q psy17032 205 GLLYAAVAM 213 (283)
Q Consensus 205 gv~~~~i~~ 213 (283)
|+|++.+-.
T Consensus 83 ~iPvV~~~~ 91 (313)
T 3m9w_A 83 GIKVLAYDR 91 (313)
T ss_dssp TCEEEEESS
T ss_pred CCeEEEECC
Confidence 999987743
No 42
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=54.34 E-value=33 Score=31.03 Aligned_cols=86 Identities=13% Similarity=0.179 Sum_probs=55.0
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEee
Q psy17032 136 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT 215 (283)
Q Consensus 136 ~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vs 215 (283)
-..++|++|++.++++|++.|++++ . ++ +| .-|.+- .+.. ...|+|.+.|..-+
T Consensus 262 ~~~~~~~~l~~~l~~~a~~~gIp~q-~-~~---~g--gGtDa~--~i~~-----------------a~~Gipt~~igvp~ 315 (355)
T 3kl9_A 262 PGHLLLPGMKDFLLTTAEEAGIKYQ-Y-YC---GK--GGTDAG--AAHL-----------------KNGGVPSTTIGVCA 315 (355)
T ss_dssp TTEECCHHHHHHHHHHHHHTTCCEE-E-EE---CS--SCCTHH--HHTT-----------------STTCCCEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEE-E-EC---CC--cchHHH--HHHH-----------------hCCCCCEEEEccCc
Confidence 3678999999999999999999998 4 32 32 223221 1111 12478888887766
Q ss_pred ecCCCcCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17032 216 DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIAAK 257 (283)
Q Consensus 216 d~a~~~~~~~~~~~~e~~~~~~~~~~~~~~ll~~~l~~l~~~ 257 (283)
-+.... .+.++.+++.. ..+|+.++++++.++
T Consensus 316 ~~~Hs~--~E~~~~~Di~~--------~~~ll~~~l~~l~~~ 347 (355)
T 3kl9_A 316 RYIHSH--QTLYAMDDFLE--------AQAFLQALVKKLDRS 347 (355)
T ss_dssp BSCSSS--CEEEEHHHHHH--------HHHHHHHHHHTCCHH
T ss_pred CCCCCc--ceEeeHHHHHH--------HHHHHHHHHHHhCHH
Confidence 654322 35566666543 345888888887543
No 43
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=50.42 E-value=55 Score=27.29 Aligned_cols=74 Identities=11% Similarity=0.019 Sum_probs=44.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHH-HHHHHHcCCcEEecCc---------hHHHHHHHH
Q psy17032 134 IPMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLVNMTL---------VPEVVLAKE 203 (283)
Q Consensus 134 ~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE-~~~~~~~Gad~V~Me~---------aaea~vA~~ 203 (283)
+++..+|-..+.+-+.+.+++.|+.+. +. .+....+...+ .+.+.+.++|.+=... .+....++.
T Consensus 23 ~~~~~~~~~~~~~gi~~~a~~~g~~~~----~~-~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~ 97 (298)
T 3tb6_A 23 TYISDYIFPSIIRGIESYLSEQGYSML----LT-STNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEK 97 (298)
T ss_dssp SCSSSTTHHHHHHHHHHHHHHTTCEEE----EE-ECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHCCCEEE----EE-eCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHh
Confidence 334566778899999999999998776 11 12211111111 2334445666544422 255666788
Q ss_pred cCCcEEEEE
Q psy17032 204 AGLLYAAVA 212 (283)
Q Consensus 204 ~gv~~~~i~ 212 (283)
.|+|++.+-
T Consensus 98 ~~iPvV~~~ 106 (298)
T 3tb6_A 98 NGIPFAMIN 106 (298)
T ss_dssp TTCCEEEES
T ss_pred cCCCEEEEe
Confidence 899998764
No 44
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=48.80 E-value=40 Score=29.76 Aligned_cols=83 Identities=11% Similarity=0.033 Sum_probs=53.4
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeee
Q psy17032 137 EPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD 216 (283)
Q Consensus 137 ~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd 216 (283)
..+.++++.+.++++|++.|++++ ..+. ...-|.+ ... .....|+|.+.+..-..
T Consensus 239 ~~~~~~~l~~~~~~~a~~~gi~~q-~~~~-----~~GGsD~------------------~~~-~~s~~Gipt~~lG~~~~ 293 (321)
T 3cpx_A 239 RMIPRKKYVNRIIELARQTDIPFQ-LEVE-----GAGASDG------------------REL-QLSPYPWDWCFIGAPEK 293 (321)
T ss_dssp SSCCCHHHHHHHHHHHTTSSCCEE-EEEC-----SSCCCHH------------------HHH-HHSSSCCBCCBEECEEB
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEE-EEeC-----CCCCccH------------------HHH-HHhCCCCCEEEEchhhc
Confidence 567899999999999999999988 3221 1122322 111 11235899998888776
Q ss_pred cCCCcCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy17032 217 YDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKI 254 (283)
Q Consensus 217 ~a~~~~~~~~~~~~e~~~~~~~~~~~~~~ll~~~l~~l 254 (283)
+.... .+.++.+++... .+|+.+++++|
T Consensus 294 ~~Hs~--~E~~~~~dl~~~--------~~ll~~~~~~l 321 (321)
T 3cpx_A 294 DAHTP--NECVHKKDIESM--------VGLYKYLMEKL 321 (321)
T ss_dssp STTST--TCEEEHHHHHHH--------HHHHHHHHHHC
T ss_pred ccchh--hhheeHHHHHHH--------HHHHHHHHHhC
Confidence 65432 567777777543 34666666543
No 45
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=43.32 E-value=48 Score=27.70 Aligned_cols=74 Identities=15% Similarity=0.071 Sum_probs=43.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHH-HHHHHHcCCcEEec---Cch---HHHHHHHHcCC
Q psy17032 134 IPMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLVNM---TLV---PEVVLAKEAGL 206 (283)
Q Consensus 134 ~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE-~~~~~~~Gad~V~M---e~a---aea~vA~~~gv 206 (283)
++...+|-..+.+-+.+.+++.|+.+. +. .+....+...+ .+.+...++|.+=. ... +....+.+.|+
T Consensus 16 ~~~~~~~~~~~~~gi~~~a~~~g~~~~----~~-~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~i 90 (293)
T 3l6u_A 16 VNDKHEFAQRLINAFKAEAKANKYEAL----VA-TSQNSRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGI 90 (293)
T ss_dssp SCSCSHHHHHHHHHHHHHHHHTTCEEE----EE-ECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTC
T ss_pred ecCCcHHHHHHHHHHHHHHHHcCCEEE----EE-CCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCC
Confidence 344566778899999999999998776 11 12211111111 23343445554322 222 55667788899
Q ss_pred cEEEEE
Q psy17032 207 LYAAVA 212 (283)
Q Consensus 207 ~~~~i~ 212 (283)
|++.+-
T Consensus 91 PvV~~~ 96 (293)
T 3l6u_A 91 PVFAID 96 (293)
T ss_dssp CEEEES
T ss_pred CEEEec
Confidence 998874
No 46
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=42.72 E-value=86 Score=27.54 Aligned_cols=86 Identities=16% Similarity=0.176 Sum_probs=52.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeee
Q psy17032 137 EPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD 216 (283)
Q Consensus 137 ~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd 216 (283)
..++|+.+++.+++++++.|+++. .-+ .+|+ -|-|+ ... .....|+|.+.|..-+.
T Consensus 251 ~~~~~~~l~~~~~~~a~~~gi~~~-~~~---~~g~-------------ggsDa------~~~-~~~~~gipt~~lg~~~~ 306 (346)
T 1vho_A 251 GPVVDRNLVQKIIEIAKKHNVSLQ-EEA---VGGR-------------SGTET------DFV-QLVRNGVRTSLISIPLK 306 (346)
T ss_dssp STTSCHHHHHHHHHHHHHTTCCCE-EES---SCCC-----------------C------TTH-HHHHTTCEEEEEEEECB
T ss_pred CCcCCHHHHHHHHHHHHHCCCCEE-EEe---CCCC-------------CCchH------HHH-HHhCCCCcEEEEehhhc
Confidence 356899999999999999999877 321 1111 01111 111 11245899998888776
Q ss_pred cCCCcCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17032 217 YDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIAA 256 (283)
Q Consensus 217 ~a~~~~~~~~~~~~e~~~~~~~~~~~~~~ll~~~l~~l~~ 256 (283)
+.... .+.++.+++... .+++.+++.++..
T Consensus 307 ~~Hs~--~E~~~~~dl~~~--------~~ll~~~~~~~~~ 336 (346)
T 1vho_A 307 YMHTP--VEMVDPRDVEEL--------ARLLSLVAVELEV 336 (346)
T ss_dssp STTST--TEEECHHHHHHH--------HHHHHHHHHHCC-
T ss_pred ccccH--HHhcCHHHHHHH--------HHHHHHHHHHhhh
Confidence 54332 567787776542 3477777776643
No 47
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=40.15 E-value=33 Score=30.50 Aligned_cols=51 Identities=18% Similarity=0.100 Sum_probs=30.7
Q ss_pred EEEECCeEEEEEeccCCCcccCCCccchH---HHHHHHHHcCCCEEEEeccccc
Q psy17032 43 QGTIQGVDCVILARHGRKHTINPSNVNYR---ANIWALKSVGCTHVIVSTATGS 93 (283)
Q Consensus 43 ~G~~~G~~Vv~~~r~G~g~~~~~~~V~~~---a~~~~l~~~Gv~~iI~tg~aG~ 93 (283)
.|+++|++|+++...-.+...+.....+. ..++...+.++..|+++++.|+
T Consensus 112 ~g~i~G~~V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~~~PvI~l~~sGGa 165 (304)
T 2f9y_B 112 KGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGA 165 (304)
T ss_dssp ECEETTEECBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHHTCCEEEEEEESSB
T ss_pred EEEECCEEEEEEEEcCccccCCCCHHHHHHHHHHHHHHHhCCCCEEEEECCCCc
Confidence 67899999988752211111111122233 2345555679999999997765
No 48
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=38.27 E-value=37 Score=30.34 Aligned_cols=41 Identities=7% Similarity=0.143 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEE
Q psy17032 141 DNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLV 190 (283)
Q Consensus 141 d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V 190 (283)
+..+++.+.+.|+++|+++.-+|| ||.++.+.++++|+|.+
T Consensus 267 ~~~iv~~ii~la~~lg~~vvAEGV---------Et~~q~~~L~~lG~d~~ 307 (340)
T 4hjf_A 267 SAKIVRSVVKLGQDLDLEVVAEGV---------ENAEMAHALQSLGCDYG 307 (340)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEECC---------CSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeC---------CcHHHHHHHHHcCCCEe
Confidence 445666777778888887764554 57777778888887754
No 49
>3tlq_A Regulatory protein YDIV; anti-FLHD4C2 factor, repress motility, transcription; 1.91A {Escherichia coli}
Probab=37.66 E-value=32 Score=28.91 Aligned_cols=42 Identities=7% Similarity=-0.041 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEE
Q psy17032 140 FDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLV 190 (283)
Q Consensus 140 ~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V 190 (283)
.+..+.+.+.+.|+++|+++.-+|+ ||.++.+.++++|++.+
T Consensus 182 ~~~~iv~~ii~~a~~l~~~vvAEGV---------Et~~q~~~l~~lG~~~~ 223 (242)
T 3tlq_A 182 SFEPFIRAIQAQISPCCNCIIAGGI---------DTAEILAQITPFDFHAL 223 (242)
T ss_dssp GGHHHHHHHHHHHTTTCSEEEECCC---------CSHHHHHHHGGGCCSEE
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEeC---------CcHHHHHHHHHcCCCEE
Confidence 3455667777788888887765665 68888888999998864
No 50
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=37.16 E-value=1.1e+02 Score=25.56 Aligned_cols=72 Identities=13% Similarity=0.035 Sum_probs=45.6
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHH-HH---HHHHcCCcEEecCc------hHHHHHHHHcC
Q psy17032 136 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SN---LFRSWNAHLVNMTL------VPEVVLAKEAG 205 (283)
Q Consensus 136 ~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE-~~---~~~~~Gad~V~Me~------aaea~vA~~~g 205 (283)
...+|-..+.+-+++++++.|+.+. + ...+.|..+++ .+ .+...++|.+=... .+....++..|
T Consensus 13 ~~~~~~~~~~~gi~~~a~~~g~~~~----~--~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~g 86 (297)
T 3rot_A 13 SQDPYWTSLFQGAKKAAEELKVDLQ----I--LAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLN 86 (297)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTCEEE----E--ECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHHHHHHT
T ss_pred CCCchHHHHHHHHHHHHHHhCcEEE----E--ECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCC
Confidence 3456778899999999999998776 1 34445534433 23 33344666554322 34556678889
Q ss_pred CcEEEEEE
Q psy17032 206 LLYAAVAM 213 (283)
Q Consensus 206 v~~~~i~~ 213 (283)
+|++.+-.
T Consensus 87 iPvV~~~~ 94 (297)
T 3rot_A 87 IPVIAVDT 94 (297)
T ss_dssp CCEEEESC
T ss_pred CCEEEEcC
Confidence 99987743
No 51
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=37.15 E-value=73 Score=28.40 Aligned_cols=60 Identities=13% Similarity=0.029 Sum_probs=39.6
Q ss_pred cccEEEEEE-CCeEEEEEeccCCCcccCCCccc-hH-HHHHHHHHcCCCEEEEecccccCCCCCCCCc
Q psy17032 38 SDVLLQGTI-QGVDCVILARHGRKHTINPSNVN-YR-ANIWALKSVGCTHVIVSTATGSLQEEIQPGD 102 (283)
Q Consensus 38 ~~~~~~G~~-~G~~Vv~~~r~G~g~~~~~~~V~-~~-a~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GD 102 (283)
...+|..+- .|++++++ +|. .++.... ++ +-+..++++||+.||..|+...-.|.-++-.
T Consensus 90 ~~~ly~~~~~~g~~~lll--~gp---eP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~~~~phtrp~~ 152 (319)
T 2p90_A 90 NLGLHVVRDNDNKPFLML--SGP---EPDLRWGDFSNAVVDLVEKFGVENTICLYAAPMTVPHTRPTV 152 (319)
T ss_dssp CCEEEEEECTTCCEEEEE--EEE---CCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEESCCTTSCCC
T ss_pred CeEEEEecCCCCCeEEEE--ECC---CChHHHHHHHHHHHHHHHHcCCCEEEEEeCccCCCCCCCCCC
Confidence 446776554 47788888 562 2333332 44 3466789999999999999887555555533
No 52
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=35.91 E-value=67 Score=26.74 Aligned_cols=73 Identities=16% Similarity=0.135 Sum_probs=42.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHH-HHHHHHcCCcEEecC------chHHHHHHHHcCCc
Q psy17032 135 PMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLVNMT------LVPEVVLAKEAGLL 207 (283)
Q Consensus 135 ~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE-~~~~~~~Gad~V~Me------~aaea~vA~~~gv~ 207 (283)
+...+|-..+.+-+.+.+++.|+.+. +. .+....+...+ .+.+...++|.+=.. ..+....+...|+|
T Consensus 14 ~~~~~~~~~~~~gi~~~a~~~g~~~~----~~-~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iP 88 (291)
T 3l49_A 14 GTDHDWDLKAYQAQIAEIERLGGTAI----AL-DAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIP 88 (291)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEE----EE-ECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCC
T ss_pred CCCChHHHHHHHHHHHHHHHcCCEEE----EE-cCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCc
Confidence 34456667899999999999998776 11 12111111111 233444466654432 23455667888999
Q ss_pred EEEEE
Q psy17032 208 YAAVA 212 (283)
Q Consensus 208 ~~~i~ 212 (283)
++.+-
T Consensus 89 vV~~~ 93 (291)
T 3l49_A 89 LFTVD 93 (291)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 98774
No 53
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=35.83 E-value=89 Score=26.55 Aligned_cols=72 Identities=15% Similarity=0.074 Sum_probs=43.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHH---HHHHHcCCcEEecC------chHHHHHHHHcC
Q psy17032 135 PMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAES---NLFRSWNAHLVNMT------LVPEVVLAKEAG 205 (283)
Q Consensus 135 ~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~---~~~~~~Gad~V~Me------~aaea~vA~~~g 205 (283)
+...+|-..+.+-+.+.++++|+.+. +. .+. .....+. +.+...++|.+=.. ..+....+...|
T Consensus 12 ~~~~~~~~~~~~gi~~~a~~~g~~~~----~~-~~~--~~~~~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~g 84 (330)
T 3uug_A 12 TKSSARWIDDGNNIVKQLQEAGYKTD----LQ-YAD--DDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQG 84 (330)
T ss_dssp CSSSTHHHHHHHHHHHHHHHTTCEEE----EE-ECT--TCHHHHHHHHHHHHHHTCSEEEECCSSGGGGHHHHHHHHHTT
T ss_pred CCcchHHHHHHHHHHHHHHHcCCEEE----Ee-eCC--CCHHHHHHHHHHHHHcCCCEEEEEcCCchhHHHHHHHHHHCC
Confidence 34456778899999999999998776 11 121 1112222 33333455544332 234466788899
Q ss_pred CcEEEEEE
Q psy17032 206 LLYAAVAM 213 (283)
Q Consensus 206 v~~~~i~~ 213 (283)
+|++.+-.
T Consensus 85 iPvV~~~~ 92 (330)
T 3uug_A 85 IKVIAYDR 92 (330)
T ss_dssp CEEEEESS
T ss_pred CCEEEECC
Confidence 99987643
No 54
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=34.48 E-value=74 Score=26.08 Aligned_cols=73 Identities=12% Similarity=0.137 Sum_probs=43.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHH-HHHHHHcCCcEEecC-----chHHHHHHHHcCCcE
Q psy17032 135 PMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLVNMT-----LVPEVVLAKEAGLLY 208 (283)
Q Consensus 135 ~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE-~~~~~~~Gad~V~Me-----~aaea~vA~~~gv~~ 208 (283)
+...+|-..+.+-+.+.+++.|+.+. +. .+...-+...+ .+.+.+.++|.+=.. ..+....+.+.|+|+
T Consensus 11 ~~~~~~~~~~~~gi~~~a~~~g~~~~----~~-~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPv 85 (272)
T 3o74_A 11 DLENPSYARIAKQLEQGARARGYQLL----IA-SSDDQPDSERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPV 85 (272)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCEEE----EE-ECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHHTTCCE
T ss_pred CCcChhHHHHHHHHHHHHHHCCCEEE----EE-eCCCCHHHHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHHcCCCE
Confidence 34456778899999999999998776 11 12211111111 233444455543321 245667788899999
Q ss_pred EEEE
Q psy17032 209 AAVA 212 (283)
Q Consensus 209 ~~i~ 212 (283)
+.+-
T Consensus 86 V~~~ 89 (272)
T 3o74_A 86 IAID 89 (272)
T ss_dssp EEES
T ss_pred EEEc
Confidence 8663
No 55
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=33.77 E-value=1.2e+02 Score=24.70 Aligned_cols=72 Identities=10% Similarity=-0.024 Sum_probs=43.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCC-cccCHHHH---HHHHHcC-CcEEecCc------hHHHHHHHH
Q psy17032 135 PMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGP-RFSSRAES---NLFRSWN-AHLVNMTL------VPEVVLAKE 203 (283)
Q Consensus 135 ~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp-~fet~aE~---~~~~~~G-ad~V~Me~------aaea~vA~~ 203 (283)
+...+|-..+.+-+.+.++++|+++. + ...+ ......+. +.+.+.+ +|.+=... .+....+.+
T Consensus 9 ~~~~~~~~~~~~gi~~~~~~~g~~~~----~--~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~ 82 (276)
T 3ksm_A 9 GDSNAYWRQVYLGAQKAADEAGVTLL----H--RSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRA 82 (276)
T ss_dssp CSSSTHHHHHHHHHHHHHHHHTCEEE----E--CCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCEEE----E--ECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHH
Confidence 33456778899999999999998776 1 1211 12222222 3333345 66544333 345667788
Q ss_pred cCCcEEEEE
Q psy17032 204 AGLLYAAVA 212 (283)
Q Consensus 204 ~gv~~~~i~ 212 (283)
.|+|++.+-
T Consensus 83 ~~ipvV~~~ 91 (276)
T 3ksm_A 83 RNIPVLVVD 91 (276)
T ss_dssp TTCCEEEES
T ss_pred CCCcEEEEe
Confidence 899998874
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=33.39 E-value=65 Score=27.03 Aligned_cols=47 Identities=17% Similarity=0.203 Sum_probs=34.8
Q ss_pred HcCCcEEEEEEeeecCCCcCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhccccCC
Q psy17032 203 EAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIAAKDW 259 (283)
Q Consensus 203 ~~gv~~~~i~~vsd~a~~~~~~~~~~~~e~~~~~~~~~~~~~~ll~~~l~~l~~~~~ 259 (283)
..|+|.+.+..-..++... ++.++.+++.+ +.+++.++|++|.+.++
T Consensus 306 ~~Giptv~~G~g~~~~Ht~--~E~v~i~dl~~--------~~~ll~~~i~~L~~~d~ 352 (354)
T 2wzn_A 306 KEGVATAVLSIPIRYMHSQ--VELADARDVDN--------TIKLAKALLEELKPMDF 352 (354)
T ss_dssp TTCCEEEEEEEEEBSTTST--TCEEEHHHHHH--------HHHHHHHHHHHCCCCCC
T ss_pred cCCCCEEEECcccCCCCcc--cEEEEHHHHHH--------HHHHHHHHHHhCccccC
Confidence 4689999998876655332 67888888754 34689999999987654
No 57
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=32.66 E-value=1e+02 Score=26.91 Aligned_cols=85 Identities=12% Similarity=0.095 Sum_probs=52.2
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEee
Q psy17032 136 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMAT 215 (283)
Q Consensus 136 ~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vs 215 (283)
...+.++.+++.++++++++|+++. .... +| .-|.+ ... .....|+|.+.|..-+
T Consensus 253 ~~~~~~~~l~~~~~~~a~~~gi~~~-~~~~---~~--ggsDa------------------~~~-~~~~~gipt~~lg~~~ 307 (348)
T 1ylo_A 253 KSLIAPPKLTAWIETVAAEIGVPLQ-ADMF---SN--GGTDG------------------GAV-HLTGTGVPTLVMGPAT 307 (348)
T ss_dssp SSCBCCHHHHHHHHHHHHHHTCCCE-EEEC---SS--CCCHH------------------HHH-HTSTTCCCEEEEECCC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeE-Eeec---CC--CcchH------------------HHH-HHhcCCCCEEEECccc
Confidence 3567899999999999999999887 3221 11 11221 111 1123588988877766
Q ss_pred ecCCCcCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy17032 216 DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIA 255 (283)
Q Consensus 216 d~a~~~~~~~~~~~~e~~~~~~~~~~~~~~ll~~~l~~l~ 255 (283)
.+.... .+.++.+++... .+++.+++.++.
T Consensus 308 ~~~Hs~--~E~~~~~d~~~~--------~~ll~~~~~~l~ 337 (348)
T 1ylo_A 308 RHGHCA--ASIADCRDILQM--------EQLLSALIQRLT 337 (348)
T ss_dssp BSCSSS--CEEEEHHHHHHH--------HHHHHHHHHTCC
T ss_pred CcCCCc--ceEeeHHHHHHH--------HHHHHHHHHHhh
Confidence 554322 466777776542 347777777663
No 58
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=32.50 E-value=1e+02 Score=28.53 Aligned_cols=66 Identities=11% Similarity=0.160 Sum_probs=42.3
Q ss_pred CCeEEEEEeccCCC-cccCCCccchH-HHHHHHHHcCCCEEEEecccccCCCCCCCCcEEEecccccccC
Q psy17032 47 QGVDCVILARHGRK-HTINPSNVNYR-ANIWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFIDRTR 114 (283)
Q Consensus 47 ~G~~Vv~~~r~G~g-~~~~~~~V~~~-a~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~~~~ 114 (283)
+|-+|++++-.||. +.....+.... .+-++=+.+|.+..+.-...|.+ ++++||+++....--|.+
T Consensus 53 ~gakVil~SHlGRP~kg~~~~~~SL~pva~~L~~lLg~~V~f~~d~~~~v--~l~~G~VlLLEN~RF~~~ 120 (395)
T 4fey_A 53 QGGAVILMSHLGRPTEGEYDSQFSLEPVAKALSEIINKPVKFAKDWLDGV--DVKAGEIVMCENVRFNSG 120 (395)
T ss_dssp HTCEEEEECCCSCCCTTSCCGGGCSHHHHHHHHHHHCSCEEEESSTTTCC--CCCTTCEEEECCGGGSTT
T ss_pred CCCEEEEEecCCCCCCCCcCcccCHHHHHHHHHHHHCCCcEECccccccc--CCCCCcEEEEeecccCch
Confidence 36679999755665 22111122222 23445578888877777777775 999999999987765443
No 59
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=32.25 E-value=1.3e+02 Score=27.63 Aligned_cols=63 Identities=16% Similarity=0.247 Sum_probs=40.1
Q ss_pred CCeEEEEEeccCCC-cccCCCccchH-HHHHHHHHcCCCEEEEeccc-ccCCCCCCCCcEEEecccccc
Q psy17032 47 QGVDCVILARHGRK-HTINPSNVNYR-ANIWALKSVGCTHVIVSTAT-GSLQEEIQPGDLVILDSFIDR 112 (283)
Q Consensus 47 ~G~~Vv~~~r~G~g-~~~~~~~V~~~-a~~~~l~~~Gv~~iI~tg~a-G~l~~~l~~GDiVi~~d~i~~ 112 (283)
+|-+|++++-.||. +.....+.... .+-++=+.+|.+..+.--.. | ++ +++||+++....-.|
T Consensus 50 ~gakvil~SHlGRP~kG~~~~~~SL~pva~~L~~lLg~~V~f~~d~~~G-v~--l~~G~VlLLEN~RF~ 115 (387)
T 1zmr_A 50 QGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG-VD--VAEGELVVLENVRFN 115 (387)
T ss_dssp TTCEEEEECCCSSCBTTBCCGGGCSHHHHHHHHHHCSSCEEEESCCTTC-CC--CCTTCEEEECCGGGS
T ss_pred CCCEEEEEccCCCCCCCCcCCccCHHHHHHHHHHHhCCCCEECcccccC-cc--CCCCeEEEEcccCCC
Confidence 46789999756766 33211222222 23455578888776665666 5 55 999999998876544
No 60
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=30.77 E-value=1.9e+02 Score=25.34 Aligned_cols=85 Identities=13% Similarity=0.070 Sum_probs=50.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEeee
Q psy17032 137 EPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD 216 (283)
Q Consensus 137 ~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~vsd 216 (283)
..+.++.|.+.+++++++.|+++. ... .+..-|. ...+.. ...|+|.+.+..-..
T Consensus 266 ~~~~~~~l~~~l~~~a~~~gi~~~-~~~-----~~~ggsD--a~~~~~-----------------~~~GiPtv~lg~~~~ 320 (353)
T 1y0y_A 266 SVICHPTIVRWLEELAKKHEIPYQ-LEI-----LLGGGTD--AGAIHL-----------------TKAGVPTGALSVPAR 320 (353)
T ss_dssp TEECCHHHHHHHHHHHHHTTCCEE-EEE-----CSSCCCT--HHHHTT-----------------STTCCCEEEEEEEEB
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEE-Eee-----cCCCCch--HHHHHH-----------------hCCCCcEEEEccccc
Confidence 356799999999999999998876 221 1111121 111210 124788888776555
Q ss_pred cCCCcCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17032 217 YDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIAA 256 (283)
Q Consensus 217 ~a~~~~~~~~~~~~e~~~~~~~~~~~~~~ll~~~l~~l~~ 256 (283)
+.... .+.++.+++... .+++.+++.++.+
T Consensus 321 ~~Hs~--~E~v~~~dl~~~--------~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 321 YIHSN--TEVVDERDVDAT--------VELMTKALENIHE 350 (353)
T ss_dssp SCSSS--CEEEEHHHHHHH--------HHHHHHHHHHGGG
T ss_pred ccCCH--HHhcCHHHHHHH--------HHHHHHHHHhhhh
Confidence 44322 466777776442 3466666666643
No 61
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=30.64 E-value=62 Score=28.19 Aligned_cols=39 Identities=13% Similarity=0.278 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcE
Q psy17032 142 NSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHL 189 (283)
Q Consensus 142 ~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~ 189 (283)
..+++.+.+.|+++|+++.-+|+ ||.++.+.++++|++.
T Consensus 219 ~~iv~~ii~la~~lg~~vvAEGV---------Et~~q~~~l~~lG~d~ 257 (294)
T 2r6o_A 219 TQIVTTILALARGLGMEVVAEGI---------ETAQQYAFLRDRGCEF 257 (294)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCC---------CSHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHCCCEEEEecC---------CcHHHHHHHHHcCCCE
Confidence 34566667777777777664554 5666677777777664
No 62
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=29.99 E-value=1.1e+02 Score=25.51 Aligned_cols=69 Identities=14% Similarity=0.101 Sum_probs=39.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHH---HHHHHcCCcEEecCc------hHHHHHHHHcCCc
Q psy17032 137 EPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAES---NLFRSWNAHLVNMTL------VPEVVLAKEAGLL 207 (283)
Q Consensus 137 ~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~---~~~~~~Gad~V~Me~------aaea~vA~~~gv~ 207 (283)
..+|-..+.+-+.+.+++.|+.+. +. .+. .....+. +.+...++|.+=+.. .+....++..|+|
T Consensus 12 ~~~f~~~~~~gi~~~~~~~g~~~~----~~-~~~--~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iP 84 (283)
T 2ioy_A 12 NNPFFVTLKNGAEEKAKELGYKII----VE-DSQ--NDSSKELSNVEDLIQQKVDVLLINPVDSDAVVTAIKEANSKNIP 84 (283)
T ss_dssp SSHHHHHHHHHHHHHHHHHTCEEE----EE-ECT--TCHHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHhcCcEEE----Ee-cCC--CCHHHHHHHHHHHHHcCCCEEEEeCCchhhhHHHHHHHHHCCCe
Confidence 345667888999999999987765 11 121 2222222 333344555433211 1345567788999
Q ss_pred EEEEE
Q psy17032 208 YAAVA 212 (283)
Q Consensus 208 ~~~i~ 212 (283)
++.+-
T Consensus 85 vV~~~ 89 (283)
T 2ioy_A 85 VITID 89 (283)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 88763
No 63
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=29.47 E-value=51 Score=24.89 Aligned_cols=67 Identities=16% Similarity=0.155 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHH-HHHHHcCCcEE-------ecCchHHHHHHHHcCCcEEEEE
Q psy17032 141 DNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAES-NLFRSWNAHLV-------NMTLVPEVVLAKEAGLLYAAVA 212 (283)
Q Consensus 141 d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~-~~~~~~Gad~V-------~Me~aaea~vA~~~gv~~~~i~ 212 (283)
++..++.+....++.|+.+. + ...+..|. +.+++...|+| +|++...+..-++.++|++.++
T Consensus 17 ~~~~~~~l~~~L~~~G~~v~--~--------~a~~g~eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 17 ESMIAMLIEDTLCELGHEVA--A--------TASRMQEALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp STTTSHHHHHHHHHHCCCCC--B--------CSCCHHHHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CHHHHHHHHHHHHHCCCEEE--E--------EECCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 34456666666777776543 1 12344553 55676666766 8899999888899999988776
Q ss_pred Eeeec
Q psy17032 213 MATDY 217 (283)
Q Consensus 213 ~vsd~ 217 (283)
.-++.
T Consensus 87 a~~~~ 91 (123)
T 2lpm_A 87 GYGSK 91 (123)
T ss_dssp TTCTT
T ss_pred cCccH
Confidence 65543
No 64
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=29.41 E-value=1.3e+02 Score=22.15 Aligned_cols=58 Identities=5% Similarity=0.008 Sum_probs=37.1
Q ss_pred eEEEEEeccCCCcccCCCccchHH-HHHHHHHcCCCEEEEecccccCCCCCCCCcEEEeccccc
Q psy17032 49 VDCVILARHGRKHTINPSNVNYRA-NIWALKSVGCTHVIVSTATGSLQEEIQPGDLVILDSFID 111 (283)
Q Consensus 49 ~~Vv~~~r~G~g~~~~~~~V~~~a-~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GDiVi~~d~i~ 111 (283)
++|+++..+|++.. .+ .+. .-..+++.|++.-|..-+...+...++--|+||.+--+.
T Consensus 22 kkIlvvC~sG~gTS----~l-l~~kl~~~~~~~gi~~~V~~~~~~~~~~~~~~~DlIist~~l~ 80 (113)
T 1tvm_A 22 RKIIVACGGAVATS----TM-AAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVD 80 (113)
T ss_dssp EEEEEESCSCSSHH----HH-HHHHHHHHHHHTTCCEEEEEECTTTTTTSTTSCSEEEESSCCC
T ss_pred cEEEEECCCCHHHH----HH-HHHHHHHHHHHcCCeEEEEEecHHHHhhccCCCCEEEECCccc
Confidence 56777733555431 11 111 235778999997677777777777666679999876544
No 65
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=28.61 E-value=2.7e+02 Score=24.85 Aligned_cols=73 Identities=12% Similarity=0.082 Sum_probs=46.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEEecCchHHHHHHHHcCCcEEEEEEe
Q psy17032 135 PMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMA 214 (283)
Q Consensus 135 ~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V~Me~aaea~vA~~~gv~~~~i~~v 214 (283)
+-+.++|+++++.++++|++.|++++ ..++ +| .-|. +...+. ...|+|.+.|.+=
T Consensus 260 d~~~~~d~~l~~~l~~~A~~~gIp~Q-~~v~---~g--gGTD------------------a~~i~~-a~~Gipt~~Igvp 314 (343)
T 3isx_A 260 DRASISSKRILENLIEIAEKFDIKYQ-MEVL---TF--GGTN------------------AMGYQR-TREGIPSATVSIP 314 (343)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTTCCCE-ECCC---BC--CCSS------------------HHHHHH-HTSSCCEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCeE-EecC---CC--CchH------------------HHHHHH-hcCCCCEEEEccc
Confidence 34678999999999999999999998 3331 11 1222 222222 2358888888877
Q ss_pred eecCCCcCCCCccCHHHHHH
Q psy17032 215 TDYDCWRDTGNKVCVADVLK 234 (283)
Q Consensus 215 sd~a~~~~~~~~~~~~e~~~ 234 (283)
+-+.... .+.++.+++..
T Consensus 315 ~r~~Hs~--~E~~~~~Di~~ 332 (343)
T 3isx_A 315 TRYVHSP--SEMIAPDDVEA 332 (343)
T ss_dssp EBSTTST--TEEECHHHHHH
T ss_pred cccccch--hhEecHHHHHH
Confidence 7664322 35567776643
No 66
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=28.43 E-value=70 Score=26.86 Aligned_cols=70 Identities=17% Similarity=0.080 Sum_probs=41.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHH---HHHHcCCcEEecCc------hHHHHHHHHcC
Q psy17032 135 PMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESN---LFRSWNAHLVNMTL------VPEVVLAKEAG 205 (283)
Q Consensus 135 ~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~---~~~~~Gad~V~Me~------aaea~vA~~~g 205 (283)
+...+|-..+.+-+.++++++|+.+. + .+. .....+.+ .+...++|.+=... .+....+++.|
T Consensus 11 ~~~~~~~~~~~~gi~~~a~~~g~~~~----~--~~~--~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~ 82 (306)
T 8abp_A 11 QPEEPWFQTEWKFADKAGKDLGFEVI----K--IAV--PDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYD 82 (306)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHTEEEE----E--EEC--CSHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHHHTT
T ss_pred CCCchHHHHHHHHHHHHHHHcCCEEE----E--eCC--CCHHHHHHHHHHHHHcCCCEEEEeCCCchhhHHHHHHHHHCC
Confidence 33456678899999999999987664 1 222 22222333 33334666543321 23356788899
Q ss_pred CcEEEEE
Q psy17032 206 LLYAAVA 212 (283)
Q Consensus 206 v~~~~i~ 212 (283)
+|++.+-
T Consensus 83 iPvV~~~ 89 (306)
T 8abp_A 83 MKVIAVD 89 (306)
T ss_dssp CEEEEES
T ss_pred CcEEEeC
Confidence 9998764
No 67
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=28.29 E-value=95 Score=25.68 Aligned_cols=74 Identities=9% Similarity=-0.037 Sum_probs=43.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHH-HHHHHHcCCcEEe---cCchHHHHHHHHcCCcEE
Q psy17032 134 IPMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLVN---MTLVPEVVLAKEAGLLYA 209 (283)
Q Consensus 134 ~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE-~~~~~~~Gad~V~---Me~aaea~vA~~~gv~~~ 209 (283)
+++..+|-..+.+-+.+.+++.|+.+. . . .+....+...+ .+.+...++|.+= ....+....+.+.|+|++
T Consensus 15 ~~~~~~~~~~~~~gi~~~~~~~g~~~~-~---~-~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~l~~~~iPvV 89 (276)
T 3jy6_A 15 ANIDDYFSTELFKGISSILESRGYIGV-L---F-DANADIEREKTLLRAIGSRGFDGLILQSFSNPQTVQEILHQQMPVV 89 (276)
T ss_dssp SCTTSHHHHHHHHHHHHHHHTTTCEEE-E---E-ECTTCHHHHHHHHHHHHTTTCSEEEEESSCCHHHHHHHHTTSSCEE
T ss_pred CCCCchHHHHHHHHHHHHHHHCCCEEE-E---E-eCCCCHHHHHHHHHHHHhCCCCEEEEecCCcHHHHHHHHHCCCCEE
Confidence 344566778899999999999998776 1 1 12221111111 2334444555432 233455566777899998
Q ss_pred EEE
Q psy17032 210 AVA 212 (283)
Q Consensus 210 ~i~ 212 (283)
.+-
T Consensus 90 ~i~ 92 (276)
T 3jy6_A 90 SVD 92 (276)
T ss_dssp EES
T ss_pred EEe
Confidence 763
No 68
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=27.57 E-value=91 Score=26.05 Aligned_cols=37 Identities=8% Similarity=0.185 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcE
Q psy17032 144 TRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHL 189 (283)
Q Consensus 144 L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~ 189 (283)
+.+.+.+.|+++|+++.-+|+ ||.++.+.++++|++.
T Consensus 197 ~~~~i~~~a~~~g~~viaeGV---------Et~~~~~~l~~lG~~~ 233 (259)
T 3s83_A 197 IVRSVVKLGQDLDLEVVAEGV---------ENAEMAHALQSLGCDY 233 (259)
T ss_dssp HHHHHHHHHHHTTCEEEECCC---------CSHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHCCCeEEEEeC---------CCHHHHHHHHhcCCCE
Confidence 344455556666655543333 4555555566666553
No 69
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=27.11 E-value=2.2e+02 Score=24.30 Aligned_cols=72 Identities=10% Similarity=-0.010 Sum_probs=41.9
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHH-HHHHHHcCCcEE---ecC-chHHHHHHHHcCCcEEE
Q psy17032 136 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLV---NMT-LVPEVVLAKEAGLLYAA 210 (283)
Q Consensus 136 ~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE-~~~~~~~Gad~V---~Me-~aaea~vA~~~gv~~~~ 210 (283)
...+|-.++.+-+.+.+++.|+.+. - . .+....+...+ .+.+...++|.+ ... ..+....+...|+|++.
T Consensus 72 ~~~~~~~~~~~gi~~~a~~~g~~~~-~---~-~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~ 146 (339)
T 3h5o_A 72 LANTVFLETLTGIETVLDAAGYQML-I---G-NSHYDAGQELQLLRAYLQHRPDGVLITGLSHAEPFERILSQHALPVVY 146 (339)
T ss_dssp STTCTTHHHHHHHHHHHHHTTCEEE-E---E-ECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCTTHHHHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEE-E---E-eCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCHHHHHHHhcCCCCEEE
Confidence 3456678899999999999998775 1 1 12221111111 233433455543 221 23455667889999987
Q ss_pred EE
Q psy17032 211 VA 212 (283)
Q Consensus 211 i~ 212 (283)
+.
T Consensus 147 ~~ 148 (339)
T 3h5o_A 147 MM 148 (339)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 70
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=27.02 E-value=1.5e+02 Score=24.75 Aligned_cols=71 Identities=8% Similarity=0.019 Sum_probs=42.2
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHH---HHHHHcCCcEEecC---c---hHHHHHHHHcCC
Q psy17032 136 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAES---NLFRSWNAHLVNMT---L---VPEVVLAKEAGL 206 (283)
Q Consensus 136 ~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~---~~~~~~Gad~V~Me---~---aaea~vA~~~gv 206 (283)
...+|-..+.+-+.+.+++.|+.+. +...+ ......+. +.+...++|.+=.. . .+....+.+.|+
T Consensus 14 ~~~~~~~~~~~gi~~~a~~~g~~~~----~~~~~--~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~i 87 (305)
T 3g1w_A 14 SGMDYWKRCLKGFEDAAQALNVTVE----YRGAA--QYDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGI 87 (305)
T ss_dssp TTSTHHHHHHHHHHHHHHHHTCEEE----EEECS--SSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTC
T ss_pred CCChHHHHHHHHHHHHHHHcCCEEE----EeCCC--cCCHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCC
Confidence 3456778899999999999998776 11111 11222222 33334466644332 1 245666788899
Q ss_pred cEEEEE
Q psy17032 207 LYAAVA 212 (283)
Q Consensus 207 ~~~~i~ 212 (283)
|++.+-
T Consensus 88 PvV~~~ 93 (305)
T 3g1w_A 88 PIVLFD 93 (305)
T ss_dssp CEEEES
T ss_pred cEEEEC
Confidence 998764
No 71
>3kzp_A LMO0111 protein, putative diguanylate cyclase/phosphodiesterase; EAL-domain, structural genomics, PSI-2; 2.00A {Listeria monocytogenes}
Probab=26.86 E-value=87 Score=25.60 Aligned_cols=39 Identities=10% Similarity=0.099 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcE
Q psy17032 142 NSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHL 189 (283)
Q Consensus 142 ~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~ 189 (283)
..+.+.+.+.|+++|+++.-+|+ ||.++.+.++++|++.
T Consensus 185 ~~~~~~i~~~a~~lg~~viaeGV---------Et~~~~~~l~~~G~~~ 223 (235)
T 3kzp_A 185 LLFIKAWANFAQKNKLDFVVEGI---------ETKETMTLLESHGVSI 223 (235)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEE---------CSTHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEe---------cCHHHHHHHHHcCCCE
Confidence 45667777778888888775665 5777778888888764
No 72
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=26.79 E-value=1.7e+02 Score=24.55 Aligned_cols=71 Identities=8% Similarity=-0.075 Sum_probs=41.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHH---HHHHHcCCcEEecC----chH-HHHHHHHcC
Q psy17032 134 IPMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAES---NLFRSWNAHLVNMT----LVP-EVVLAKEAG 205 (283)
Q Consensus 134 ~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~---~~~~~~Gad~V~Me----~aa-ea~vA~~~g 205 (283)
++...+|-..+.+-+.+.+++.|+.+. . . .+.. ....+. +.+...++|.+=.. ..+ ....+.+ |
T Consensus 23 ~~~~~~~~~~~~~gi~~~a~~~g~~~~-~---~-~~~~--~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~ 94 (303)
T 3kke_A 23 PDVNNAVFADMFSGVQMAASGHSTDVL-L---G-QIDA--PPRGTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-G 94 (303)
T ss_dssp SCTTSTTHHHHHHHHHHHHHHTTCCEE-E---E-ECCS--TTHHHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-T
T ss_pred CCCcChHHHHHHHHHHHHHHHCCCEEE-E---E-eCCC--ChHHHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-C
Confidence 344567778999999999999998876 1 1 1222 222232 33444455544221 122 4455566 9
Q ss_pred CcEEEEE
Q psy17032 206 LLYAAVA 212 (283)
Q Consensus 206 v~~~~i~ 212 (283)
+|++.+-
T Consensus 95 iPvV~i~ 101 (303)
T 3kke_A 95 VPAVTIN 101 (303)
T ss_dssp SCEEEES
T ss_pred CCEEEEC
Confidence 9988764
No 73
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=26.25 E-value=79 Score=26.32 Aligned_cols=42 Identities=10% Similarity=-0.016 Sum_probs=32.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEE
Q psy17032 140 FDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLV 190 (283)
Q Consensus 140 ~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V 190 (283)
.+..+.+.+.+.|+++|+++.-+|+ ||.++.+.++++|++.+
T Consensus 197 ~~~~~l~~i~~~a~~l~~~viaeGV---------Et~~~~~~l~~~G~~~~ 238 (250)
T 4f3h_A 197 ESQEKIREITSRAQPTGILTVAEFV---------ADAQSMSSFFTAGVDYV 238 (250)
T ss_dssp HHHHHHHHTHHHHHHHTCEEEECCC---------CCHHHHHHHHHHTCSEE
T ss_pred hhHHHHHHHHHHHHHcCCEEEEecc---------CCHHHHHHHHHcCCCEE
Confidence 4566777888889999988774554 68888888999998864
No 74
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=25.61 E-value=26 Score=29.59 Aligned_cols=16 Identities=25% Similarity=0.418 Sum_probs=11.7
Q ss_pred HHHHHHHcCCCEEEEe
Q psy17032 73 NIWALKSVGCTHVIVS 88 (283)
Q Consensus 73 ~~~~l~~~Gv~~iI~t 88 (283)
.++.|...|++.|+..
T Consensus 68 ~~~~L~~~g~~~ivia 83 (231)
T 3ojc_A 68 AAISLKHAGAEVIVVC 83 (231)
T ss_dssp HHHHHHHHTCCEEEEC
T ss_pred HHHHHHhcCCCEEEEe
Confidence 4566778899988653
No 75
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=25.43 E-value=2.7e+02 Score=22.95 Aligned_cols=71 Identities=11% Similarity=0.017 Sum_probs=41.4
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHH-HHHHHHcCCcEEec---C-chHHHHHHHHcCCcEEEE
Q psy17032 137 EPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLVNM---T-LVPEVVLAKEAGLLYAAV 211 (283)
Q Consensus 137 ~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE-~~~~~~~Gad~V~M---e-~aaea~vA~~~gv~~~~i 211 (283)
..+|-..+.+-+.+.+++.|+.+. - . .+...-+...+ .+.+...++|.+=. . ..+....+...|+|++.+
T Consensus 19 ~~~~~~~~~~gi~~~a~~~g~~~~-~---~-~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~~ 93 (287)
T 3bbl_A 19 VNHILDQFLSSMVREAGAVNYFVL-P---F-PFSEDRSQIDIYRDLIRSGNVDGFVLSSINYNDPRVQFLLKQKFPFVAF 93 (287)
T ss_dssp SCCTHHHHHHHHHHHHHHTTCEEE-E---C-CCCSSTTCCHHHHHHHHTTCCSEEEECSCCTTCHHHHHHHHTTCCEEEE
T ss_pred CChhHHHHHHHHHHHHHHcCCEEE-E---E-eCCCchHHHHHHHHHHHcCCCCEEEEeecCCCcHHHHHHHhcCCCEEEE
Confidence 456778899999999999997765 1 1 11111122122 34454445553321 1 124555667789998876
Q ss_pred E
Q psy17032 212 A 212 (283)
Q Consensus 212 ~ 212 (283)
-
T Consensus 94 ~ 94 (287)
T 3bbl_A 94 G 94 (287)
T ss_dssp S
T ss_pred C
Confidence 4
No 76
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=25.38 E-value=1.1e+02 Score=27.64 Aligned_cols=60 Identities=13% Similarity=0.040 Sum_probs=40.6
Q ss_pred cccEEEEEE-CCeEEEEEeccCCCcccCCCccc-hH-HHHHHHHHcCCCEEEEecccccCCCCCCCCc
Q psy17032 38 SDVLLQGTI-QGVDCVILARHGRKHTINPSNVN-YR-ANIWALKSVGCTHVIVSTATGSLQEEIQPGD 102 (283)
Q Consensus 38 ~~~~~~G~~-~G~~Vv~~~r~G~g~~~~~~~V~-~~-a~~~~l~~~Gv~~iI~tg~aG~l~~~l~~GD 102 (283)
...+|.-+- .|++++++ +|-- |+.... ++ +-+.+++++||+.||..|+...-.|.-+|-.
T Consensus 130 ~~~ly~~~d~~g~~~LlL--~G~e---P~~~w~~fa~~vl~~a~~~gV~~vvtLgglp~~vphtRp~~ 192 (351)
T 2wam_A 130 ELSLYALRDSIGTPFLLL--AGLE---PDLKWERFITAVRLLAERLGVRQTIGLGTVPMAVPHTRPIT 192 (351)
T ss_dssp CEEEEEEECTTCCEEEEE--EEEC---CSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEESCCTTSCCC
T ss_pred ceEEEEeccCCCCcEEEE--ECCC---ChhHHHHHHHHHHHHHHHhCCCEEEEEecccCCCCCccCcc
Confidence 445555443 56888888 6752 333333 44 3466779999999999999988777666644
No 77
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=25.00 E-value=48 Score=30.01 Aligned_cols=30 Identities=13% Similarity=0.152 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcc
Q psy17032 141 DNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRF 173 (283)
Q Consensus 141 d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~f 173 (283)
..++++.+.++|++.|++++ -|+| .+++-+
T Consensus 98 ~~Dlv~~~l~aa~k~Gmkv~-~Gly--~S~~~W 127 (340)
T 4h41_A 98 SVDLVDMYLRLAEKYNMKFY-FGLY--DSGRYW 127 (340)
T ss_dssp SBCHHHHHHHHHHHTTCEEE-EECC--BCSHHH
T ss_pred cccHHHHHHHHHHHhCCeEE-EecC--CChhhc
Confidence 34689999999999999998 8998 466444
No 78
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=24.82 E-value=1.8e+02 Score=24.87 Aligned_cols=70 Identities=3% Similarity=-0.105 Sum_probs=40.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHH-HHHHHHcCCcEEec-----CchHHHHHHHHcCCcEEEE
Q psy17032 138 PAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLVNM-----TLVPEVVLAKEAGLLYAAV 211 (283)
Q Consensus 138 ~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE-~~~~~~~Gad~V~M-----e~aaea~vA~~~gv~~~~i 211 (283)
.+|-.++.+-+.+.+++.|+.+. +. .+....+...+ .+.+...++|.+=. +.......+...++|++.+
T Consensus 75 ~~~~~~~~~gi~~~a~~~g~~~~----~~-~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~ 149 (338)
T 3dbi_A 75 GIYFSELLFHAARMAEEKGRQLL----LA-DGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVL 149 (338)
T ss_dssp TTHHHHHHHHHHHHHHHTTCEEE----EE-ECTTSHHHHHHHHHHHHHTTCSEEEECCSSSCHHHHHHHHHHCSSCEEEE
T ss_pred ChhHHHHHHHHHHHHHHCCCEEE----EE-eCCCChHHHHHHHHHHHhCCCCEEEEeCCCCChHHHHHHHHcCCCCEEEE
Confidence 45667899999999999998775 11 12111111111 23344445554322 2234556778889998866
Q ss_pred E
Q psy17032 212 A 212 (283)
Q Consensus 212 ~ 212 (283)
-
T Consensus 150 ~ 150 (338)
T 3dbi_A 150 N 150 (338)
T ss_dssp S
T ss_pred c
Confidence 3
No 79
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=24.54 E-value=88 Score=28.13 Aligned_cols=41 Identities=10% Similarity=0.125 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcE
Q psy17032 140 FDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHL 189 (283)
Q Consensus 140 ~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~ 189 (283)
.+..+++.+.+.|+++|+++.-+|+ ||.++.+.++++|++.
T Consensus 330 ~~~~~v~~i~~~a~~l~~~vvaEGV---------Et~~~~~~l~~~g~~~ 370 (400)
T 3sy8_A 330 RSCAVISSVVALAQALGISLVVEGV---------ESDEQRVRLIELGCSI 370 (400)
T ss_dssp THHHHHHHHHHHHHHHTCEEEECCC---------CCHHHHHHHHHHTCCE
T ss_pred hHHHHHHHHHHHHHHcCCeEEEecC---------CcHHHHHHHHHcCCCE
Confidence 4455667777778888887764554 5777777888888774
No 80
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=23.71 E-value=1.7e+02 Score=24.90 Aligned_cols=68 Identities=19% Similarity=0.181 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHH-HH---HHHHHcCCcEEe---cCc---hHHHHHHHHcCCc
Q psy17032 138 PAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRA-ES---NLFRSWNAHLVN---MTL---VPEVVLAKEAGLL 207 (283)
Q Consensus 138 ~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~a-E~---~~~~~~Gad~V~---Me~---aaea~vA~~~gv~ 207 (283)
.+|-..+++-+++.++++|+++. +.++.-..++ +. +.+...++|++= ... .+....|++.|+|
T Consensus 15 ~~~~~~~~~g~~~~~~~~g~~~~-------~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~~~~~~~~~~a~~~gip 87 (316)
T 1tjy_A 15 VGFFTSGGNGAQEAGKALGIDVT-------YDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVK 87 (316)
T ss_dssp SHHHHHHHHHHHHHHHHHTCEEE-------ECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSSSTTHHHHHHHHHTTCE
T ss_pred ChHHHHHHHHHHHHHHHhCCEEE-------EECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCcCE
Confidence 44556788888999999987665 2222222222 22 233334666432 211 3456678889999
Q ss_pred EEEEE
Q psy17032 208 YAAVA 212 (283)
Q Consensus 208 ~~~i~ 212 (283)
++.+-
T Consensus 88 vV~~d 92 (316)
T 1tjy_A 88 ILTWD 92 (316)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 98773
No 81
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=23.36 E-value=1.8e+02 Score=25.50 Aligned_cols=66 Identities=8% Similarity=0.088 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHcCCcEEeeeeEEEecCCccc---C----HHH-HHHHHHcCCcEEecCch--------HHHHHHHH---
Q psy17032 143 STRQIIIDSLKELGFKFHDKGTAVCIEGPRFS---S----RAE-SNLFRSWNAHLVNMTLV--------PEVVLAKE--- 203 (283)
Q Consensus 143 ~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fe---t----~aE-~~~~~~~Gad~V~Me~a--------aea~vA~~--- 203 (283)
+....+.+.|++.|+++. -=+| ..|+... . .++ .+.+..+|+|.+.-+.. ....+++.
T Consensus 142 ~~i~~v~~~~~~~G~p~l-v~~~--~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~ 218 (304)
T 1to3_A 142 NMVKEFNELCHSNGLLSI-IEPV--VRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNG 218 (304)
T ss_dssp HHHHHHHHHHHTTTCEEE-EEEE--ECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEE-EEEE--CCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccc
Confidence 445566677788898876 3344 4666552 1 233 34456789999877663 23345666
Q ss_pred -cCCcEEEE
Q psy17032 204 -AGLLYAAV 211 (283)
Q Consensus 204 -~gv~~~~i 211 (283)
.++|++++
T Consensus 219 ~~~~P~Vv~ 227 (304)
T 1to3_A 219 HINMPWVIL 227 (304)
T ss_dssp TCCSCEEEC
T ss_pred cCCCCeEEE
Confidence 78995443
No 82
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=22.72 E-value=32 Score=28.64 Aligned_cols=17 Identities=18% Similarity=0.327 Sum_probs=12.2
Q ss_pred HHHHHHHcCCCEEEEec
Q psy17032 73 NIWALKSVGCTHVIVST 89 (283)
Q Consensus 73 ~~~~l~~~Gv~~iI~tg 89 (283)
.++.|...|++.|+...
T Consensus 66 ~~~~l~~~g~d~iviaC 82 (228)
T 1jfl_A 66 TAKRLEECGADFIIMPC 82 (228)
T ss_dssp HHHHHHHHTCSEEECSC
T ss_pred HHHHHHHcCCCEEEEcC
Confidence 45667788999877543
No 83
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=22.65 E-value=2.1e+02 Score=23.78 Aligned_cols=73 Identities=11% Similarity=-0.030 Sum_probs=41.9
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHH---HHHHHcCCcEEecC----chHHHHHHHHcC
Q psy17032 133 HIPMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAES---NLFRSWNAHLVNMT----LVPEVVLAKEAG 205 (283)
Q Consensus 133 ~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~---~~~~~~Gad~V~Me----~aaea~vA~~~g 205 (283)
.++...+|-..+.+-+.+.+++.|+.+. +. .+.. ....+. +.+...++|.+=.. ..+....+...|
T Consensus 23 ~~~~~~~~~~~~~~gi~~~a~~~g~~~~----~~-~~~~--~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~ 95 (289)
T 2fep_A 23 IPDISSIFYSELARGIEDIATMYKYNII----LS-NSDQ--NMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSP 95 (289)
T ss_dssp ESCTTSHHHHHHHHHHHHHHHHTTCEEE----EE-ECTT--CHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHSS
T ss_pred eCCCCCchHHHHHHHHHHHHHHcCCEEE----EE-eCCC--CHHHHHHHHHHHHhCCCCEEEEecCCCCHHHHHHHHhcC
Confidence 3444566777888999999999998765 11 1221 112222 33444456543221 233444566789
Q ss_pred CcEEEEE
Q psy17032 206 LLYAAVA 212 (283)
Q Consensus 206 v~~~~i~ 212 (283)
+|++.+-
T Consensus 96 iPvV~~~ 102 (289)
T 2fep_A 96 VPIVLAA 102 (289)
T ss_dssp SCEEEES
T ss_pred CCEEEEc
Confidence 9998774
No 84
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=22.34 E-value=1.6e+02 Score=24.11 Aligned_cols=73 Identities=11% Similarity=-0.000 Sum_probs=41.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHH-HHHHHHcCCcEEecCc--hHHHH-HHHHcCCcEE
Q psy17032 134 IPMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLVNMTL--VPEVV-LAKEAGLLYA 209 (283)
Q Consensus 134 ~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE-~~~~~~~Gad~V~Me~--aaea~-vA~~~gv~~~ 209 (283)
++...+|-..+.+-+.+.+++.|+.+. . . .+....+...+ .+.+...++|.+=... ..... .+...|+|++
T Consensus 16 ~~~~~~~~~~~~~gi~~~~~~~g~~~~-~---~-~~~~~~~~~~~~~~~l~~~~~dgiIi~~~~~~~~~~~l~~~~iPvV 90 (277)
T 3e61_A 16 PDMSNPFFTLIARGVEDVALAHGYQVL-I---G-NSDNDIKKAQGYLATFVSHNCTGMISTAFNENIIENTLTDHHIPFV 90 (277)
T ss_dssp SCTTSHHHHHHHHHHHHHHHHTTCCEE-E---E-ECTTCHHHHHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHC-CCEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEE-E---E-eCCCCHHHHHHHHHHHHhCCCCEEEEecCChHHHHHHHHcCCCCEE
Confidence 344566778899999999999998876 1 1 12221111111 2334444555433322 23344 6778899987
Q ss_pred EE
Q psy17032 210 AV 211 (283)
Q Consensus 210 ~i 211 (283)
.+
T Consensus 91 ~~ 92 (277)
T 3e61_A 91 FI 92 (277)
T ss_dssp EG
T ss_pred EE
Confidence 65
No 85
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=21.75 E-value=2e+02 Score=23.82 Aligned_cols=69 Identities=13% Similarity=0.080 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHH-HHHHHcCCcEE---ecC-chHHHHHHHHcCCcEEEEE
Q psy17032 139 AFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAES-NLFRSWNAHLV---NMT-LVPEVVLAKEAGLLYAAVA 212 (283)
Q Consensus 139 ~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~-~~~~~~Gad~V---~Me-~aaea~vA~~~gv~~~~i~ 212 (283)
+|-.++.+-+.+.+++.|..+. -- .....-+...+. +.+.+.++|.+ ..+ ..+....+.+.|+|++.+-
T Consensus 23 ~~~~~~~~gi~~~a~~~g~~~~-~~----~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~ 96 (288)
T 3gv0_A 23 GFTSQMVFGITEVLSTTQYHLV-VT----PHIHAKDSMVPIRYILETGSADGVIISKIEPNDPRVRFMTERNMPFVTHG 96 (288)
T ss_dssp CHHHHHHHHHHHHHTTSSCEEE-EC----CBSSGGGTTHHHHHHHHHTCCSEEEEESCCTTCHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHHHHHcCCEEE-Ee----cCCcchhHHHHHHHHHHcCCccEEEEecCCCCcHHHHHHhhCCCCEEEEC
Confidence 6678899999999999998776 11 122222222233 34554444433 222 2355667788999998654
No 86
>3e35_A Uncharacterized protein SCO1997; alpha/beta/alpha structure, actinobacteria-specific protein, conserved protein, unknown function; 2.20A {Streptomyces coelicolor}
Probab=21.34 E-value=1.4e+02 Score=26.74 Aligned_cols=58 Identities=10% Similarity=0.010 Sum_probs=39.8
Q ss_pred cccEEEEEE-CCeEEEEEeccCCCcccCCCccc-hH-HHHHHHHHcCCCEEEEecccccCCCCCCC
Q psy17032 38 SDVLLQGTI-QGVDCVILARHGRKHTINPSNVN-YR-ANIWALKSVGCTHVIVSTATGSLQEEIQP 100 (283)
Q Consensus 38 ~~~~~~G~~-~G~~Vv~~~r~G~g~~~~~~~V~-~~-a~~~~l~~~Gv~~iI~tg~aG~l~~~l~~ 100 (283)
...+|..+- .|++++++ +|. .|+.+.. ++ +-..+++++||+.||..|+...-.|.=+|
T Consensus 93 ~~~ly~~~d~~~~~~llL--~G~---eP~~~w~~f~~avl~~a~~~gV~~vv~Lggip~~vpHtRP 153 (325)
T 3e35_A 93 TIEVRLVQDATGAPFLFL--SGP---EPDVEWERFAAAVGQIVERLGVRLSVSFHGIPMGVPHTRP 153 (325)
T ss_dssp CCEEEEEECTTCCEEEEE--EEE---CCSSCHHHHHHHHHHHHHHTTEEEEEEEEEEEESCCTTSC
T ss_pred CeEEEEecCCCCCcEEEE--ECC---CCcchHHHHHHHHHHHHHHcCCCEEEEEeCccCCCCCCCC
Confidence 446665553 47888888 674 2333332 44 34667799999999999998877776555
No 87
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=21.15 E-value=1.4e+02 Score=24.57 Aligned_cols=70 Identities=7% Similarity=0.031 Sum_probs=41.9
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHH---HHHHHcCCcEEec----CchHHHHHHHHcCCcE
Q psy17032 136 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAES---NLFRSWNAHLVNM----TLVPEVVLAKEAGLLY 208 (283)
Q Consensus 136 ~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~---~~~~~~Gad~V~M----e~aaea~vA~~~gv~~ 208 (283)
...+|-..+.+-+.+.+++.|+.+. . ...+ .....+. +.+...++|.+=. ...+....+.+.|+|+
T Consensus 23 ~~~~~~~~~~~gi~~~a~~~g~~~~-~-----~~~~-~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~l~~~~iPv 95 (292)
T 3k4h_A 23 FQNPFFPEVIRGISSFAHVEGYALY-M-----STGE-TEEEIFNGVVKMVQGRQIGGIILLYSRENDRIIQYLHEQNFPF 95 (292)
T ss_dssp TTSTHHHHHHHHHHHHHHHTTCEEE-E-----CCCC-SHHHHHHHHHHHHHTTCCCEEEESCCBTTCHHHHHHHHTTCCE
T ss_pred ccCHHHHHHHHHHHHHHHHcCCEEE-E-----EeCC-CCHHHHHHHHHHHHcCCCCEEEEeCCCCChHHHHHHHHCCCCE
Confidence 3456778899999999999998776 1 1111 1111122 3344445554322 1235566678899999
Q ss_pred EEEE
Q psy17032 209 AAVA 212 (283)
Q Consensus 209 ~~i~ 212 (283)
+.+-
T Consensus 96 V~~~ 99 (292)
T 3k4h_A 96 VLIG 99 (292)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8764
No 88
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=20.75 E-value=2e+02 Score=24.87 Aligned_cols=77 Identities=10% Similarity=0.073 Sum_probs=42.2
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecC-CcccCHHHH----HHHHHcCCcEEecCch--------HHH
Q psy17032 132 LHIPMEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEG-PRFSSRAES----NLFRSWNAHLVNMTLV--------PEV 198 (283)
Q Consensus 132 ~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~G-p~fet~aE~----~~~~~~Gad~V~Me~a--------aea 198 (283)
.++++....+.+.++.+.+.+++.+.++. +-|.-..+ | +.+|+ +.++++|||+|-+-.. ...
T Consensus 135 dyIDvEl~~~~~~~~~l~~~a~~~~~kvI--~S~Hdf~~tP---~~~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll 209 (276)
T 3o1n_A 135 DMIDLELFTGDDEVKATVGYAHQHNVAVI--MSNHDFHKTP---AAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLL 209 (276)
T ss_dssp SEEEEEGGGCHHHHHHHHHHHHHTTCEEE--EEEEESSCCC---CHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHH
T ss_pred CEEEEECcCCHHHHHHHHHHHHhCCCEEE--EEeecCCCCc---CHHHHHHHHHHHHHcCCCEEEEEecCCChHHHHHHH
Confidence 34455555667777777777777776664 33332221 2 23443 2345679988776322 222
Q ss_pred HHHHH-----cCCcEEEEEE
Q psy17032 199 VLAKE-----AGLLYAAVAM 213 (283)
Q Consensus 199 ~vA~~-----~gv~~~~i~~ 213 (283)
.+.++ .+.|++++++
T Consensus 210 ~~~~~~~~~~~~~PlIa~~M 229 (276)
T 3o1n_A 210 TATVEMQERYADRPIITMSM 229 (276)
T ss_dssp HHHHHHHHHTCCSCCEEEEC
T ss_pred HHHHHHHhcCCCCCEEEEEC
Confidence 22222 5778888753
No 89
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling PR; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=20.56 E-value=1.1e+02 Score=27.89 Aligned_cols=41 Identities=15% Similarity=0.230 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEE
Q psy17032 141 DNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLV 190 (283)
Q Consensus 141 d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V 190 (283)
+..+++.+.+.|+++|+++.-+|+ ||.++.+.++++|++.+
T Consensus 346 ~~~iv~~ii~la~~lg~~viAEGV---------Et~~q~~~l~~lG~d~~ 386 (413)
T 3gfz_A 346 KQAIVASVVRCCEDLGITVVAEGV---------ETLEEWCWLQSVGIRLF 386 (413)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEECC---------CSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEecC---------CCHHHHHHHHHcCCCEE
Confidence 455778888889999988875665 68888888999998864
No 90
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=20.24 E-value=2.3e+02 Score=23.34 Aligned_cols=69 Identities=16% Similarity=0.136 Sum_probs=38.8
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHH---HHHHHcCCcEEec---Cc---hHHHHHHHHcCCc
Q psy17032 137 EPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAES---NLFRSWNAHLVNM---TL---VPEVVLAKEAGLL 207 (283)
Q Consensus 137 ~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~---~~~~~~Gad~V~M---e~---aaea~vA~~~gv~ 207 (283)
..+|-..+.+-+.+.+++.|+.+. +. .+.. ....+. +.+...++|.+=. .. .+....+++.|+|
T Consensus 13 ~~~~~~~~~~gi~~~~~~~g~~~~----~~-~~~~--~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iP 85 (290)
T 2fn9_A 13 NNPWFVVLAETAKQRAEQLGYEAT----IF-DSQN--DTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIP 85 (290)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCEEE----EE-ECTT--CHHHHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHHHTTCC
T ss_pred CChHHHHHHHHHHHHHHHcCCEEE----Ee-CCCC--CHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCe
Confidence 345567788889999999998765 11 1211 111222 3333345553322 11 1345556778999
Q ss_pred EEEEE
Q psy17032 208 YAAVA 212 (283)
Q Consensus 208 ~~~i~ 212 (283)
++.+-
T Consensus 86 vV~~~ 90 (290)
T 2fn9_A 86 VFCVD 90 (290)
T ss_dssp EEEES
T ss_pred EEEEe
Confidence 98764
No 91
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.23 E-value=60 Score=22.57 Aligned_cols=19 Identities=21% Similarity=0.352 Sum_probs=16.8
Q ss_pred cccccCCCCCCCCcEEEec
Q psy17032 89 TATGSLQEEIQPGDLVILD 107 (283)
Q Consensus 89 g~aG~l~~~l~~GDiVi~~ 107 (283)
|++++....+++||.|++.
T Consensus 1 ~~~~~~~~~~kvGd~clA~ 19 (74)
T 2equ_A 1 GSSGSSGFDFKAGEEVLAR 19 (74)
T ss_dssp CCSCCSCCCCCTTCEEEEE
T ss_pred CCcccCCCCCCCCCEEEEE
Confidence 6778888899999999986
No 92
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=20.11 E-value=1.4e+02 Score=26.98 Aligned_cols=41 Identities=10% Similarity=0.077 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHHHHHHHHcCCcEE
Q psy17032 141 DNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLV 190 (283)
Q Consensus 141 d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE~~~~~~~Gad~V 190 (283)
+..+.+.+.+.|+.+|+++.-+|+ ||.++.++++++|++.+
T Consensus 378 ~~~~~~~i~~~a~~l~~~viaeGV---------Et~~~~~~l~~~g~~~~ 418 (430)
T 3pjx_A 378 KRLFIEAIQRAAHSIDLPLIAERV---------ETEGELSVIREMGLYGV 418 (430)
T ss_dssp HHHHHHHHHHHHHTTTCCEEECCC---------CCHHHHHHHHHTTCSEE
T ss_pred hHHHHHHHHHHHHHCCCcEEEEec---------CCHHHHHHHHHcCCCee
Confidence 345677788889999998875665 68888889999999864
No 93
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=20.09 E-value=2.3e+02 Score=24.26 Aligned_cols=72 Identities=10% Similarity=0.015 Sum_probs=41.6
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEeeeeEEEecCCcccCHHH-HHHHHHcCCcEEec---C-chHHHHHHHHcCCcEEE
Q psy17032 136 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLVNM---T-LVPEVVLAKEAGLLYAA 210 (283)
Q Consensus 136 ~~~~~d~~L~~~~~~~a~~~g~~~~~~G~~~~~~Gp~fet~aE-~~~~~~~Gad~V~M---e-~aaea~vA~~~gv~~~~ 210 (283)
...+|-.++.+-+.+.+++.|+.+. +. .+....+...+ .+.+...++|.+=. . ..+....+...|+|++.
T Consensus 78 ~~~~~~~~~~~gi~~~a~~~g~~~~----~~-~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~ 152 (344)
T 3kjx_A 78 LSNMVFPEVLTGINQVLEDTELQPV----VG-VTDYLPEKEEKVLYEMLSWRPSGVIIAGLEHSEAARAMLDAAGIPVVE 152 (344)
T ss_dssp SSSSSHHHHHHHHHHHHTSSSSEEE----EE-ECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCHHHHHHHHHCSSCEEE
T ss_pred CCcHHHHHHHHHHHHHHHHCCCEEE----EE-eCCCCHHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHhCCCCEEE
Confidence 3456667899999999999988775 11 12221111111 23333445553322 2 23455667889999998
Q ss_pred EE
Q psy17032 211 VA 212 (283)
Q Consensus 211 i~ 212 (283)
+.
T Consensus 153 i~ 154 (344)
T 3kjx_A 153 IM 154 (344)
T ss_dssp EE
T ss_pred Ee
Confidence 83
Done!