BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17033
(148 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1CB0|A Chain A, Structure Of Human 5'-deoxy-5'-methylthioadenosine
Phosphorylase At 1.7 A Resolution
pdb|1CG6|A Chain A, Structure Of Human 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate At 1.7 A
Resolution
pdb|1K27|A Chain A, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase In Complex With A Transition State
Analogue
pdb|1SD1|A Chain A, Structure Of Human 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase Complexed With Formycin A
pdb|1SD2|A Chain A, Structure Of Human 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase Complexed With 5'-Methylthiotubercidin
pdb|3OZC|A Chain A, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase In Complex With Pcl-Phenylthiodadmeimma
pdb|3OZD|A Chain A, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase In Complex With Pcl-Phenylthiodadmeimma
pdb|3OZD|B Chain B, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase In Complex With Pcl-Phenylthiodadmeimma
pdb|3OZE|A Chain A, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
pdb|3OZE|B Chain B, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
pdb|3OZE|C Chain C, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
pdb|3OZE|D Chain D, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
pdb|3OZE|E Chain E, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
pdb|3OZE|F Chain F, Crystal Structure Of Human 5'-Deoxy-5'-Methyladenosine
Phosphorylase
Length = 283
Score = 155 bits (393), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 100/143 (69%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLV 60
M F TR+++I++ K+LG + H KGT V IEGPRFSSRAES +FR+W A ++NMT V
Sbjct: 140 MAEPFCPKTREVLIETAKKLGLRCHSKGTMVTIEGPRFSSRAESFMFRTWGADVINMTTV 199
Query: 61 PEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIA 120
PEVVLAKEAG+ YA++AMATDYDCW++ V V VLKT KEN K L + +P+I
Sbjct: 200 PEVVLAKEAGICYASIAMATDYDCWKEHEEAVSVDRVLKTLKENANKAKSLLLTTIPQIG 259
Query: 121 AKDWTNEITELKSVVETSNMSPQ 143
+ +W+ + LK++ + S + P+
Sbjct: 260 STEWSETLHNLKNMAQFSVLLPR 282
>pdb|1WTA|A Chain A, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine From
Aeropyrum Pernix (R32 Form)
Length = 275
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRS-WNAHLVNMTL 59
M F RQ +IDS + LG+ H++GT VCIEGPRFS+RAES +++ + A ++ MTL
Sbjct: 138 MADPFCEDLRQRLIDSGRRLGYTVHERGTYVCIEGPRFSTRAESRVWKDVFKADIIGMTL 197
Query: 60 VPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKI 119
VPE+ LA EA L YA +AM TDYD W D V +V + NVE+ ++ ++PK+
Sbjct: 198 VPEINLACEAQLCYATLAMVTDYDVWAD--RPVTAEEVERVMISNVERARRMLYDVIPKL 255
Query: 120 AAK 122
A +
Sbjct: 256 AGE 258
>pdb|2A8Y|A Chain A, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|B Chain B, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|C Chain C, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|D Chain D, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|E Chain E, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|F Chain F, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|G Chain G, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|H Chain H, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|I Chain I, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|J Chain J, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|K Chain K, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|2A8Y|L Chain L, Crystal Structure Of 5'-Deoxy-5'methylthioadenosine
Phosphorylase Complexed With 5'-Deoxy-
5'methylthioadenosine And Sulfate
pdb|3T94|A Chain A, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
pdb|3T94|B Chain B, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
pdb|3T94|C Chain C, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
pdb|3T94|D Chain D, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
pdb|3T94|E Chain E, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
pdb|3T94|F Chain F, Crystal Structure Of 5'-Deoxy-5'-Methylthioadenosine
Phosphorylase (Mtap) Ii Complexed With
5'-Deoxy-5'-Methylthioadenosine And Sulfate
Length = 270
Score = 104 bits (260), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRS-WNAHLVNMTL 59
M F NS R++ I++ KEL K H+ GT +CIEGPRFS+RAES +R + A ++ MTL
Sbjct: 133 MADPFCNSLRKLAIETAKELNIKTHESGTYICIEGPRFSTRAESRTWREVYKADIIGMTL 192
Query: 60 VPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKI 119
VPEV LA EA + YA +AM TDYD + + V +V + EN EK KL ++ K+
Sbjct: 193 VPEVNLACEAQMCYATIAMVTDYDVFAEI--PVTAEEVTRVMAENTEKAKKLLYALIQKL 250
Query: 120 AAK 122
K
Sbjct: 251 PEK 253
>pdb|1V4N|A Chain A, Structure Of 5'-Deoxy-5'-Methylthioadenosine Phosphorylase
Homologue From Sulfolobus Tokodaii
pdb|1V4N|B Chain B, Structure Of 5'-Deoxy-5'-Methylthioadenosine Phosphorylase
Homologue From Sulfolobus Tokodaii
pdb|1V4N|C Chain C, Structure Of 5'-Deoxy-5'-Methylthioadenosine Phosphorylase
Homologue From Sulfolobus Tokodaii
Length = 281
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRS-WNAHLVNMTL 59
M F R II+DS K+LG HDKGT +CIEGPRFS+RAES +++ + A ++ MTL
Sbjct: 134 MADPFCEHLRSIILDSAKDLGITTHDKGTYICIEGPRFSTRAESIVWKEVFKADIIGMTL 193
Query: 60 VPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKI 119
VPEV LA EA + Y+ + M TDYD + D V +V K EN K+ KL ++ ++
Sbjct: 194 VPEVNLACEAEMCYSVIGMVTDYDVFADI--PVTAEEVTKVMAENTAKVKKLLYEVIRRL 251
Query: 120 AAK 122
K
Sbjct: 252 PEK 254
>pdb|4GLF|A Chain A, Crystal Structure Of Methylthioadenosine Phosphorylase
Sourced From An Antarctic Soil Metagenomic Library
pdb|4GLJ|A Chain A, Crystal Structure Of Methylthioadenosine Phosphorylase In
Complex With Rhodamine B
Length = 297
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%)
Query: 25 HDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDC 84
H K T VCIEGP+FS+RAES+ +R A ++ MT +PE LA+EA + YA +A+ TD+DC
Sbjct: 166 HAKATYVCIEGPQFSTRAESHWYRQMQADIIGMTNMPEAKLAREASIAYATLALVTDFDC 225
Query: 85 WRDTGNKVCVADVLKTFKENVEKITKLFVHIVPKIAAK 122
W V ++ +N + ++ V IA++
Sbjct: 226 WHPNEQAVSADYAIQNLMKNADNAQQVIKQAVALIASE 263
>pdb|3OZB|A Chain A, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
pdb|3OZB|B Chain B, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
pdb|3OZB|C Chain C, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
pdb|3OZB|D Chain D, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
pdb|3OZB|E Chain E, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
pdb|3OZB|F Chain F, Crystal Structure Of 5'-Methylthioinosine Phosphorylase
From Psedomonas Aeruginosa In Complex With Hypoxanthine
Length = 259
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 5 FDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAE-SNLFRSWNAHLVNMTLVPEV 63
+D RQ +I++L+ LG G C +GPR + AE + L R N +V MT +PE
Sbjct: 147 YDEPLRQRLIEALRALGLAHSSHGVYACTQGPRLETVAEIARLERDGND-IVGMTGMPEA 205
Query: 64 VLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 116
LA+E L YA +A+ + + G + +A++ + + + K+ ++ ++
Sbjct: 206 ALARELDLPYACLALVVNPAAGKSAG-IITMAEIEQALHDGIGKVREVLARVL 257
>pdb|3KHS|A Chain A, Crystal Structure Of Grouper Iridovirus Purine Nucleoside
Phosphorylase
pdb|3KHS|B Chain B, Crystal Structure Of Grouper Iridovirus Purine Nucleoside
Phosphorylase
pdb|3KHS|C Chain C, Crystal Structure Of Grouper Iridovirus Purine Nucleoside
Phosphorylase
pdb|3KHS|D Chain D, Crystal Structure Of Grouper Iridovirus Purine Nucleoside
Phosphorylase
Length = 285
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M +D + R+ I + +ELG + +G C+ GP F + AE + R + V M+
Sbjct: 159 MTSVYDKTLRKYAISAARELGMSYATHEGVYCCVNGPSFETPAECKILRLMGSDAVGMST 218
Query: 60 VPEVVLAKEAGLLYAAVAMATDY---DCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 116
PE ++AK G+ AV++ ++ +C +T + +VL+ +E ++T L ++
Sbjct: 219 APETIVAKHGGMRCLAVSLISNVIASNC--ETPAEPTHEEVLRAGEEASARMTALVKLVI 276
Query: 117 PKI 119
KI
Sbjct: 277 EKI 279
>pdb|4EAR|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EAR|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EAR|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
Length = 324
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D + RQ + + K++G + +GT V + GP F + AE + + A V M+
Sbjct: 197 MSDAYDRTMRQRALSTYKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMST 256
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ K +VL K+ +K+ + FV
Sbjct: 257 VPEVIVARHCGLRVFGFSLITNKVIMDYESL----EKANXEEVLAAGKQAAQKLEQ-FVS 311
Query: 115 IV 116
I+
Sbjct: 312 IL 313
>pdb|1V48|A Chain A, Calf Spleen Purine Nucleoside Phosphorylase (Pnp) Binary
Complex With 9-(5,5-Difluoro-5-Phosphonopenthyl)guanine
pdb|2AI1|A Chain A, Purine Nucleoside Phosphorylase From Calf Spleen
pdb|2AI2|A Chain A, Purine Nucleoside Phosphorylase From Calf Spleen
pdb|2AI3|A Chain A, Purine Nucleoside Phosphorylase From Calf Spleen
Length = 289
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D RQ + K++G + +GT V + GP F + AE L R+ A V M+
Sbjct: 162 MSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ + N V + K + +E+ L +
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDYES-QGKANHEEVLEAGKQAAQKLEQFVSLLMA 280
Query: 115 IVP 117
+P
Sbjct: 281 SIP 283
>pdb|1LV8|A Chain A, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LV8|B Chain B, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LV8|C Chain C, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LV8|D Chain D, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LV8|E Chain E, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LV8|F Chain F, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|A Chain A, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|B Chain B, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|C Chain C, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|D Chain D, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|E Chain E, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
pdb|1LVU|F Chain F, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase In A New Space Group With Full Trimer In
The Asymmetric Unit
Length = 289
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D RQ + K++G + +GT V + GP F + AE L R+ A V M+
Sbjct: 162 MSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ + N V + K + +E+ L +
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDYES-QGKANHEEVLEAGKQAAQKLEQFVSLLMA 280
Query: 115 IVP 117
+P
Sbjct: 281 SIP 283
>pdb|1B8N|A Chain A, Purine Nucleoside Phosphorylase
pdb|1B8O|A Chain A, Purine Nucleoside Phosphorylase
pdb|3FUC|A Chain A, Recombinant Calf Purine Nucleoside Phosphorylase In A
Binary Complex With Multisubstrate Analogue Inhibitor
9-(5',5'- Difluoro-5'-Phosphonopentyl)-9-Deazaguanine
Structure In A New Space Group With One Full Trimer In
The Asymmetric Unit
pdb|3FUC|B Chain B, Recombinant Calf Purine Nucleoside Phosphorylase In A
Binary Complex With Multisubstrate Analogue Inhibitor
9-(5',5'- Difluoro-5'-Phosphonopentyl)-9-Deazaguanine
Structure In A New Space Group With One Full Trimer In
The Asymmetric Unit
pdb|3FUC|C Chain C, Recombinant Calf Purine Nucleoside Phosphorylase In A
Binary Complex With Multisubstrate Analogue Inhibitor
9-(5',5'- Difluoro-5'-Phosphonopentyl)-9-Deazaguanine
Structure In A New Space Group With One Full Trimer In
The Asymmetric Unit
Length = 284
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D RQ + K++G + +GT V + GP F + AE L R+ A V M+
Sbjct: 162 MSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ + N V + K + +E+ L +
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDYES-QGKANHEEVLEAGKQAAQKLEQFVSLLMA 280
Query: 115 IVP 117
+P
Sbjct: 281 SIP 283
>pdb|1VFN|A Chain A, Purine Nucleoside Phosphorylase
Length = 281
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D RQ + K++G + +GT V + GP F + AE L R+ A V M+
Sbjct: 159 MSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMST 218
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ + N V + K + +E+ L +
Sbjct: 219 VPEVIVARHCGLRVFGFSLITNKVIMDYES-QGKANHEEVLEAGKQAAQKLEQFVSLLMA 277
Query: 115 IVP 117
+P
Sbjct: 278 SIP 280
>pdb|2QPL|A Chain A, Crystal Structure Of Calf Spleen Purine Nucleoside
Phosphorylase Complexed To A Novel Purine Analogue
Length = 282
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D RQ + K++G + +GT V + GP F + AE L R+ A V M+
Sbjct: 160 MSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMST 219
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ + N V + K + +E+ L +
Sbjct: 220 VPEVIVARHCGLRVFGFSLITNKVIMDYES-QGKANHEEVLEAGKQAAQKLEQFVSLLMA 278
Query: 115 IVP 117
+P
Sbjct: 279 SIP 281
>pdb|3GB9|A Chain A, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GB9|B Chain B, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GB9|C Chain C, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GGS|A Chain A, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
pdb|3GGS|B Chain B, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
pdb|3GGS|C Chain C, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
Length = 311
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D + RQ + + K++G + +GT V + GP F + AE + + A V M+
Sbjct: 184 MSDAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFQTVAECRVLQKLGADAVGMST 243
Query: 60 VPEVVLAKEAGLLYAAVAMATD 81
VPEV++A+ GL ++ TD
Sbjct: 244 VPEVIVARHCGLRVFGFSLITD 265
>pdb|4EB8|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EB8|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EB8|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4ECE|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|D Chain D, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|E Chain E, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|F Chain F, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4GKA|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|D Chain D, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|E Chain E, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|F Chain F, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
Length = 324
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D + RQ + + K++G + +GT V + GP F + AE + + A V M+
Sbjct: 197 MSDAYDRTMRQRALSTYKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMST 256
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ K +VL K+ +K+ + FV
Sbjct: 257 VPEVIVARHCGLRVFGFSLITNKVIMDYESL----EKANWEEVLAAGKQAAQKLEQ-FVS 311
Query: 115 IV 116
I+
Sbjct: 312 IL 313
>pdb|2A0X|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257f
Mutant
pdb|2ON6|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257f With Imm-H
Length = 289
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D + RQ + + K++G + +GT V + GP F + AE + + A V M+
Sbjct: 162 MSDAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ K +VL K+ +K+ + FV
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDYESL----EKANFEEVLAAGKQAAQKLEQ-FVS 276
Query: 115 IV 116
I+
Sbjct: 277 IL 278
>pdb|1FXU|A Chain A, Purine Nucleoside Phosphorylase From Calf Spleen In
Complex With N(7)- Acycloguanosine Inhibitor And A
Phosphate Ion
Length = 289
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D RQ + K++G + +GT V + GP F + AE L R+ A V M+
Sbjct: 162 MSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMATDYDCW-RDTGNKVCVADVLKTFKENVEKITKLFVHIVPK 118
VPEV++A+ GL ++ T+ ++ K +VL+ K+ +K+ + ++
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDTESQGKANHEEVLEAGKQAAQKLEQFVSLLMAS 281
Query: 119 IAAKDWTN 126
I T
Sbjct: 282 IPVSGHTG 289
>pdb|1A9O|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
Phosphate
pdb|1A9P|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
9-deazainosine And Phosphate
pdb|1A9S|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
Inosine And Sulfate
Length = 289
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D RQ + K++G + +GT V + GP F + AE L R+ A V M+
Sbjct: 162 MSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMATDYDCW-RDTGNKVCVADVLKTFKENVEKITKLFVHIVPK 118
VPEV++A+ GL ++ T+ ++ K +VL+ K+ +K+ + ++
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDTESQGKANHEEVLEAGKQAAQKLEQFVSLLMAS 281
Query: 119 IAAKDWTN 126
I T
Sbjct: 282 IPVSGHTG 289
>pdb|3PHB|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|Q Chain Q, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|S Chain S, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|T Chain T, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|U Chain U, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|Y Chain Y, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
Length = 324
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D + RQ + + K++G + +GT V + GP F + AE + + A V M+
Sbjct: 197 MSDAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMST 256
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ ++ +VL K+ +K+ + FV
Sbjct: 257 VPEVIVARHCGLRVFGFSLITNKVIMDYESLEKANHE----EVLAAGKQAAQKLEQ-FVS 311
Query: 115 IV 116
I+
Sbjct: 312 IL 313
>pdb|1PBN|A Chain A, Purine Nucleoside Phosphorylase
pdb|3PNP|A Chain A, The High Resolution Crystal Structure Of Bovine Spleen
Purine Nucleoside Phosphorylase In Complex Forms With
Phosphate And 9- Deazainosine
pdb|4PNP|A Chain A, The High Resolution Crystal Structure Of Bovine Spleen
Purine Nucleoside Phosphorylase In Complex Forms With
Phosphate And 9- Deazainosine
Length = 289
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D RQ + K++G + +GT V + GP F + AE L R+ A V M+
Sbjct: 162 MSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMATDYDCW-RDTGNKVCVADVLKTFKENVEKITKLFVHIVPK 118
VPEV++A+ GL ++ T+ ++ K +VL+ K+ +K+ + ++
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDTESQGKANHEEVLEAGKQAAQKLEQFVSLLMAS 281
Query: 119 IAAKDWTN 126
I T
Sbjct: 282 IPVSGHTG 289
>pdb|2A0Y|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257d
Mutant
pdb|2OC4|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257d With Imm-H
Length = 289
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D + RQ + + K++G + +GT V + GP F + AE + + A V M+
Sbjct: 162 MSDAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ ++ +VL K+ +K+ + FV
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDYESLEKANDE----EVLAAGKQAAQKLEQ-FVS 276
Query: 115 IV 116
I+
Sbjct: 277 IL 278
>pdb|1PF7|E Chain E, Crystal Structure Of Human Pnp Complexed With Immucillin H
pdb|1RR6|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Immucillin-H And Phosphate
pdb|1RSZ|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Dadme-Immucillin-H And Sulfate
pdb|1RT9|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Immucillin-H And Sulfate
pdb|1YRY|E Chain E, Crystal Structure Of Human Pnp Complexed With Mesg
pdb|1ULA|A Chain A, Application Of Crystallographic And Modeling Methods In
The Design Of Purine Nucleoside Phosphorylase Inhibitors
pdb|1ULB|A Chain A, Application Of Crystallographic And Modeling Methods In
The Design Of Purine Nucleoside Phosphorylase Inhibitors
pdb|3BGS|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase With L-
Dadme-Immh And Phosphate
pdb|2Q7O|E Chain E, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With L- Immucillin-H
pdb|3D1V|A Chain A, Crystal Structure Of Human Pnp Complexed With
2-Mercapto(3h) Quinazolinone
pdb|3K8O|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|Q Chain Q, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|S Chain S, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|T Chain T, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|U Chain U, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|Y Chain Y, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8Q|A Chain A, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Serme-Immucillin H
pdb|3INY|A Chain A, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With 7-Deazaguanine
Length = 289
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D + RQ + + K++G + +GT V + GP F + AE + + A V M+
Sbjct: 162 MSDAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ ++ +VL K+ +K+ + FV
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDYESLEKANHE----EVLAAGKQAAQKLEQ-FVS 276
Query: 115 IV 116
I+
Sbjct: 277 IL 278
>pdb|1M73|E Chain E, Crystal Structure Of Human Pnp At 2.3a Resolution
pdb|1RCT|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
Complexed With Inosine
pdb|1V2H|E Chain E, Crystal Structure Of Human Pnp Complexed With Guanine
pdb|1V3Q|E Chain E, Structure Of Human Pnp Complexed With Ddi
pdb|1PWY|E Chain E, Crystal Structure Of Human Pnp Complexed With Acyclovir
pdb|1RFG|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
Complexed With Guanosine
pdb|1V41|E Chain E, Crystal Structure Of Human Pnp Complexed With 8-Azaguanine
pdb|1V45|E Chain E, Crystal Structure Of Human Pnp Complexed With
3-Deoxyguanosine
Length = 288
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D + RQ + + K++G + +GT V + GP F + AE + + A V M+
Sbjct: 161 MSDAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMST 220
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCWRDTGNKVCVADVLKTFKENVEKITKLFVH 114
VPEV++A+ GL ++ T DY+ ++ +VL K+ +K+ + FV
Sbjct: 221 VPEVIVARHCGLRVFGFSLITNKVIMDYESLEKANHE----EVLAAGKQAAQKLEQ-FVS 275
Query: 115 IV 116
I+
Sbjct: 276 IL 277
>pdb|2A0W|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257g
Mutant
pdb|2OC9|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257g With Imm-H
Length = 289
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D + RQ + + K++G + +GT V + GP F + AE + + A V M+
Sbjct: 162 MSDAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMAT-----DYDCW-RDTGNKVCVADVLKTFKENVEKITKLFV 113
VPEV++A+ GL ++ T DY+ + G +V A K + +E+ + +
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDYESLEKANGEEVLAAG--KQAAQKLEQFVSILM 279
Query: 114 HIVP 117
+P
Sbjct: 280 ASIP 283
>pdb|1A9Q|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
Inosine
pdb|1A9R|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
Hypoxanthine And Sulfate
Length = 282
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D RQ + K++G + +GT V + GP F + AE L R+ A V M+
Sbjct: 162 MSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMATDYDCW-RDTGNKVCVADVLKTFKENVEKITKL 111
VPEV++A+ GL ++ T+ ++ K +VL+ K+ +K+ +
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDTESQGKANHEEVLEAGKQAAQKLEQF 274
>pdb|1A9T|A Chain A, Bovine Purine Nucleoside Phosphorylase Complexed With
9-Deazainosine And Phosphate
Length = 284
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFH-DKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTL 59
M A+D RQ + K++G + +GT V + GP F + AE L R+ A V M+
Sbjct: 162 MSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMST 221
Query: 60 VPEVVLAKEAGLLYAAVAMATDYDCW-RDTGNKVCVADVLKTFKENVEKITKL 111
VPEV++A+ GL ++ T+ ++ K +VL+ K+ +K+ +
Sbjct: 222 VPEVIVARHCGLRVFGFSLITNKVIMDTESQGKANHEEVLEAGKQAAQKLEQF 274
>pdb|3LA8|A Chain A, The Crystal Structure Of Smu.1229 From Streptococcus
Mutans Ua159
pdb|3LBA|A Chain A, The Crystal Structure Of Smu.1229 From Streptococcus
Mutans Ua159 Bound To Hypoxanthine
Length = 303
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 1 MEPAFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLV 60
M A+ R++ ++G K D+G + + GP + + AE F++ A V M+ V
Sbjct: 188 MSNAYTADYREVAHQVADKIGIKL-DEGVYIGVSGPSYETPAEIRAFKTLGADAVGMSTV 246
Query: 61 PEVVLAKEAGLLYAAVAMATDYDC-WRDTGNKVCVADVLKTFKENVEKITK 110
PEV++A +GL ++ T+Y ++ N V V + KE+ + + K
Sbjct: 247 PEVIVAVHSGLKVLGISAITNYAAGFQSELNHEEVVAVTQQIKEDFKGLVK 297
>pdb|1TCU|A Chain A, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Phosphate And
Acetate
pdb|1TCU|B Chain B, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Phosphate And
Acetate
pdb|1TCU|C Chain C, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Phosphate And
Acetate
pdb|1TCV|A Chain A, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Non-detergent
Sulfobetaine 195 And Acetate
pdb|1TCV|B Chain B, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Non-detergent
Sulfobetaine 195 And Acetate
pdb|1TCV|C Chain C, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Non-detergent
Sulfobetaine 195 And Acetate
pdb|1TD1|A Chain A, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Acetate
pdb|1TD1|B Chain B, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Acetate
pdb|1TD1|C Chain C, Crystal Structure Of The Purine Nucleoside Phosphorylase
From Schistosoma Mansoni In Complex With Acetate
pdb|3FNQ|A Chain A, Crystal Structure Of Schistosoma Purine Nucleoside
Phosphorylase In Complex With Hypoxanthine
pdb|3FNQ|B Chain B, Crystal Structure Of Schistosoma Purine Nucleoside
Phosphorylase In Complex With Hypoxanthine
pdb|3FNQ|C Chain C, Crystal Structure Of Schistosoma Purine Nucleoside
Phosphorylase In Complex With Hypoxanthine
pdb|3DJF|A Chain A, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In A Complex With Bcx-34
pdb|3DJF|B Chain B, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In A Complex With Bcx-34
pdb|3DJF|C Chain C, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In A Complex With Bcx-34
pdb|3E0Q|A Chain A, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase Complexed With A Novel Monocyclic
Inhibitor
pdb|3E0Q|B Chain B, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase Complexed With A Novel Monocyclic
Inhibitor
pdb|3E0Q|C Chain C, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase Complexed With A Novel Monocyclic
Inhibitor
pdb|3E9R|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With Adenine
pdb|3E9R|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With Adenine
pdb|3E9R|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With Adenine
pdb|3E9Z|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With 6-Chloroguanine
pdb|3E9Z|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With 6-Chloroguanine
pdb|3E9Z|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase From
Schistosoma Mansoni In Complex With 6-Chloroguanine
pdb|3F8W|A Chain A, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Adenosine
pdb|3F8W|B Chain B, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Adenosine
pdb|3F8W|C Chain C, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Adenosine
pdb|3FAZ|A Chain A, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Inosine
pdb|3FAZ|B Chain B, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Inosine
pdb|3FAZ|C Chain C, Crystal Structure Of Schistosoma Mansoni Purine Nucleoside
Phosphorylase In Complex With Inosine
pdb|3FB1|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase In
Complex With Ribose-1-Phosphate
pdb|3FB1|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase In
Complex With Ribose-1-Phosphate
pdb|3FB1|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase In
Complex With Ribose-1-Phosphate
pdb|3IEX|A Chain A, Schistosoma Purine Nucleoside Phosphorylase In Complex
With Guanosine
pdb|3IEX|B Chain B, Schistosoma Purine Nucleoside Phosphorylase In Complex
With Guanosine
pdb|3IEX|C Chain C, Schistosoma Purine Nucleoside Phosphorylase In Complex
With Guanosine
Length = 287
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 4 AFDNSTRQIIIDSLKELGF-KFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPE 62
A+D R++ + +E GF +G V GP + + AE + + +V M+ +PE
Sbjct: 167 AYDRDLRKLAVQVAEENGFGNLVHQGVYVMNGGPCYETPAECTMLLNMGCDVVGMSTIPE 226
Query: 63 VVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKI 108
VV+A+ G+ AV++ T+ + V DV K N E++
Sbjct: 227 VVIARHCGIQVFAVSLVTN----------ISVLDVESDLKPNHEEV 262
>pdb|1VMK|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(Tm1596) From Thermotoga Maritima At 2.01 A Resolution
pdb|1VMK|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(Tm1596) From Thermotoga Maritima At 2.01 A Resolution
pdb|1VMK|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(Tm1596) From Thermotoga Maritima At 2.01 A Resolution
Length = 277
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 27 KGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATDYDCWR 86
+G + + GP + + AE +F A LV M+ VPEV+ AK GL + T+
Sbjct: 186 EGVYIGVLGPSYETPAEIRVFEKLGADLVGMSTVPEVIAAKHCGLKVVVFSCVTNMAAGI 245
Query: 87 DTGNKVCVADVLKTFKENVEKITK 110
G ++ +V++T K KI K
Sbjct: 246 THG-RLSHEEVVRTTKMAQGKIEK 268
>pdb|1YQQ|A Chain A, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YQQ|B Chain B, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YQQ|C Chain C, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YQU|A Chain A, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YQU|B Chain B, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YQU|C Chain C, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|A Chain A, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|B Chain B, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|C Chain C, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|D Chain D, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|E Chain E, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
pdb|1YR3|F Chain F, Escherichia Coli Purine Nucleoside Phosphorylase Ii, The
Product Of The Xapa Gene
Length = 277
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 4 AFDNSTRQIIIDSLKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEV 63
A+D R ++ KE GF +G V GP F + AE + + +V M++VPEV
Sbjct: 163 AYDAEYRALLQKVAKEEGFPL-TEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVVPEV 221
Query: 64 VLAKEAGLLYAAVAMATD 81
+ A+ L AV+ T+
Sbjct: 222 ISARHCDLKVVAVSAITN 239
>pdb|2P4S|A Chain A, Structure Of Purine Nucleoside Phosphorylase From
Anopheles Gambiae In Complex With Dadme-immh
pdb|2P4S|B Chain B, Structure Of Purine Nucleoside Phosphorylase From
Anopheles Gambiae In Complex With Dadme-immh
pdb|2P4S|C Chain C, Structure Of Purine Nucleoside Phosphorylase From
Anopheles Gambiae In Complex With Dadme-immh
Length = 373
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 10 RQIIIDS-LKELGFKFHDKGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKE 68
RQI I++ L+E G C+ GP F + AE + + M+ V E++ A+
Sbjct: 264 RQIGIENELRE--------GVYTCLGGPNFETVAEVKMLSMLGVDAIGMSTVHEIITARH 315
Query: 69 AGLLYAAVAMATD 81
G+ A ++ T+
Sbjct: 316 CGMTCFAFSLITN 328
>pdb|3ODG|A Chain A, Crystal Structure Of Xanthosine Phosphorylase Bound With
Xanthine From Yersinia Pseudotuberculosis
Length = 287
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 27 KGTAVCIEGPRFSSRAESNLFRSWNAHLVNMTLVPEVVLAKEAGLLYAAVAMATD 81
+G V GP F + AE + + +V M++VPEV+ A GL A+ T+
Sbjct: 193 EGVFVSYPGPCFETPAEIRMMQIIGGDVVGMSVVPEVLSAAHCGLKVIALTAITN 247
>pdb|3E7H|A Chain A, The Crystal Structure Of The Beta Subunit Of The Dna-
Directed Rna Polymerase From Vibrio Cholerae O1 Biovar
Eltor
pdb|3E7H|B Chain B, The Crystal Structure Of The Beta Subunit Of The Dna-
Directed Rna Polymerase From Vibrio Cholerae O1 Biovar
Eltor
Length = 103
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 57 MTLVPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTFKENVEKITKLFVHIV 116
M LVPE + + A + D + + G +V + + K+ V I +IV
Sbjct: 13 MELVPERLRGE-----TATFDIEADGKVYVEKGRRVTARHIRQLEKDGVNFIEVPVEYIV 67
Query: 117 PKIAAKDWTNEIT 129
K++AKD+ NE T
Sbjct: 68 GKVSAKDYVNEAT 80
>pdb|1U4Q|A Chain A, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken
Brain Alpha Spectrin
pdb|1U4Q|B Chain B, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken
Brain Alpha Spectrin
Length = 322
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 57 MTLVPEV----VLAKEAGLLYAAVAMATDYDCWRDTGNKVCV--ADVLKTFKENVEKITK 110
MTLV LA GLL A TD+ +D N VC D++K +VE IT
Sbjct: 235 MTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITA 294
Query: 111 LFVHIVPKIA 120
+ K++
Sbjct: 295 KMKGLKGKVS 304
>pdb|1WR8|A Chain A, Crystal Structure Of Hypothetical Protein Ph1421 From
Pyrococcus Horikoshii.
pdb|1WR8|B Chain B, Crystal Structure Of Hypothetical Protein Ph1421 From
Pyrococcus Horikoshii
Length = 231
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 81 DYDCWRDTGNKVCVADVLKTFKENVEKITK 110
D D ++ G KV VA K KEN + +TK
Sbjct: 181 DLDAFKVVGYKVAVAQAPKILKENADYVTK 210
>pdb|1CUN|A Chain A, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
pdb|1CUN|B Chain B, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
pdb|1CUN|C Chain C, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
Length = 213
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 57 MTLVPEV----VLAKEAGLLYAAVAMATDYDCWRDTGNKVCV--ADVLKTFKENVEKIT 109
MTLV LA GLL A TD+ +D N VC D++K +VE IT
Sbjct: 126 MTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENIT 184
>pdb|1WZC|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Mannosyl-3-
Phosphoglycerate Phosphatase Complexed With Mg2+ And
Phosphate
pdb|1WZC|B Chain B, Crystal Structure Of Pyrococcus Horikoshii Mannosyl-3-
Phosphoglycerate Phosphatase Complexed With Mg2+ And
Phosphate
Length = 249
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Query: 3 PAFDNSTRQIIIDSLKELGFK--FHDKGTAVCIEGPRFSSRAESNLF-RSWNAHLVNMTL 59
P ++ + II+ LK++GF+ F+ T E R E+ + +A +
Sbjct: 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGY 74
Query: 60 VPEVVLAKEAGLLYAAVAMATDYDCWRDTGNKVCVADVLKTF----KENVEKITKLFVHI 115
P V KE G Y + + + R+ K+ LK + KE +EK T + +
Sbjct: 75 FPFDVKGKEVGN-YIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPEL 133
Query: 116 VPKIAAKDWTNEITE 130
VP ++++ I E
Sbjct: 134 VPLAMEREYSETIFE 148
>pdb|3IGF|A Chain A, Crystal Structure Of The All4481 Protein From Nostoc Sp.
Pcc 7120, Northeast Structural Genomics Consortium
Target Nsr300
pdb|3IGF|B Chain B, Crystal Structure Of The All4481 Protein From Nostoc Sp.
Pcc 7120, Northeast Structural Genomics Consortium
Target Nsr300
Length = 374
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 107 KITKLFVHIVPKIAAKDWTNEITELKSVVETSNMSPQ 143
+ T L V +VP + DW I L + VE + +P+
Sbjct: 262 EFTPLSVTVVPDVTKGDWQPLIDALPNFVEQAEQAPK 298
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.130 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,186,254
Number of Sequences: 62578
Number of extensions: 153565
Number of successful extensions: 436
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 396
Number of HSP's gapped (non-prelim): 39
length of query: 148
length of database: 14,973,337
effective HSP length: 90
effective length of query: 58
effective length of database: 9,341,317
effective search space: 541796386
effective search space used: 541796386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)