BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1704
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q95XG9|OXDA2_CAEEL D-amino-acid oxidase 2 OS=Caenorhabditis elegans GN=Y69A2AR.5
PE=1 SV=2
Length = 322
Score = 72.0 bits (175), Expect = 9e-13, Method: Composition-based stats.
Identities = 31/49 (63%), Positives = 42/49 (85%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEP 77
K+A+LGAGI G+++AL +Q R PNC+VT+IA+KF+ +TTSD AAGL EP
Sbjct: 3 KIAVLGAGINGIASALAIQERLPNCEVTIIAEKFSPNTTSDVAAGLIEP 51
>sp|A8XJ44|OXDA2_CAEBR D-amino-acid oxidase 2 OS=Caenorhabditis briggsae GN=CBG13882
PE=3 SV=1
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEP 77
++ +LGAGI+G+STAL +Q R P+ VT+IA+KF+ +TTSD AAGL EP
Sbjct: 3 RICVLGAGIMGVSTALAIQERIPDSVVTIIAEKFSPNTTSDVAAGLIEP 51
>sp|Q99489|OXDD_HUMAN D-aspartate oxidase OS=Homo sapiens GN=DDO PE=2 SV=1
Length = 341
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEP 77
++A++GAG++GLSTA+ + + P C VT+I+DKF DTTSD AAG+ P
Sbjct: 5 RIAVVGAGVVGLSTAVCISKLVPRCSVTIISDKFTPDTTSDVAAGMLIP 53
>sp|P31228|OXDD_BOVIN D-aspartate oxidase OS=Bos taurus GN=DDO PE=1 SV=2
Length = 341
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEPSPNFMGPDLET 88
++A++GAG++GLSTA+ + + P C +TVI+DKF +TTSD AAG+ P P + PD
Sbjct: 5 RIAVVGAGVMGLSTAVCISKMVPGCSITVISDKFTPETTSDVAAGMLIP-PTY--PDTPI 61
Query: 89 TK 90
K
Sbjct: 62 QK 63
>sp|A3KCL7|OXDD_PIG D-aspartate oxidase OS=Sus scrofa GN=DDO PE=2 SV=1
Length = 341
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 38/49 (77%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEP 77
++A++GAG++GLSTA+ + + P C +TVI+DKF +TTSD AAG+ P
Sbjct: 5 RIAVVGAGVMGLSTAVCIFKLVPGCSITVISDKFTPETTSDVAAGMLIP 53
>sp|Q922Z0|OXDD_MOUSE D-aspartate oxidase OS=Mus musculus GN=Ddo PE=2 SV=1
Length = 341
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 30 VAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLFEP 77
+A++GAG+IGLSTA + + P C VTVI+D+F DTTS+ AAG+ P
Sbjct: 6 IAVVGAGVIGLSTAACISQLVPGCTVTVISDRFTPDTTSNVAAGMLIP 53
>sp|P00371|OXDA_PIG D-amino-acid oxidase OS=Sus scrofa GN=DAO PE=1 SV=2
Length = 347
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNC----DVTVIADKFNMDTTSDGAAGLFEP 77
+V ++GAG+IGLSTAL + R+ + DV V AD+F TT+D AAGL++P
Sbjct: 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDVKVYADRFTPFTTTDVAAGLWQP 54
>sp|P14920|OXDA_HUMAN D-amino-acid oxidase OS=Homo sapiens GN=DAO PE=1 SV=3
Length = 347
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNC----DVTVIADKFNMDTTSDGAAGLFEP 77
+V ++GAG+IGLSTAL + R+ + D+ V AD+F TT+D AAGL++P
Sbjct: 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQP 54
>sp|A2V9Y8|OXDA_MACFA D-amino-acid oxidase OS=Macaca fascicularis GN=DAO PE=2 SV=1
Length = 347
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNC----DVTVIADKFNMDTTSDGAAGLFEP 77
+V ++GAG+IGLSTAL + R+ + D+ V AD+F TT+D AAG ++P
Sbjct: 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGFWQP 54
>sp|P18894|OXDA_MOUSE D-amino-acid oxidase OS=Mus musculus GN=Dao PE=1 SV=3
Length = 345
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 29 KVAILGAGIIGLSTALELQRRF-PN--CDVTVIADKFNMDTTSDGAAGLFEP 77
+VA++GAG+IGLSTAL + R+ P + + AD+F TTSD AAGL++P
Sbjct: 2 RVAVIGAGVIGLSTALCIHERYHPTQPLHMKIYADRFTPFTTSDVAAGLWQP 53
>sp|O35078|OXDA_RAT D-amino-acid oxidase OS=Rattus norvegicus GN=Dao PE=2 SV=1
Length = 346
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCD---VTVIADKFNMDTTSDGAAGLFEP 77
+VA++GAG+IGLSTAL + R+ + + AD+F TTSD AAGL++P
Sbjct: 2 RVAVIGAGVIGLSTALCIHERYHPAQPLHMKIYADRFTPFTTSDVAAGLWQP 53
>sp|Q9Z1M5|OXDA_CAVPO D-amino-acid oxidase OS=Cavia porcellus GN=DAO PE=2 SV=1
Length = 347
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNC----DVTVIADKFNMDTTSDGAAGLFEPSPNFMGP 84
+V ++GAG+IGLSTAL + R+ + D+ V AD+F T +D AAGL++P GP
Sbjct: 2 RVVVIGAGVIGLSTALCICERYHSVLQQLDLRVYADRFTPLTNTDVAAGLWQPY--LSGP 59
Query: 85 D 85
D
Sbjct: 60 D 60
>sp|Q19564|OXDD1_CAEEL D-aspartate oxidase 1 OS=Caenorhabditis elegans GN=F18E3.7 PE=1
SV=1
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLF 75
K+AI+G G+IG ++AL++ + PN +TV+ DK + S G AGLF
Sbjct: 7 KIAIIGEGVIGCTSALQISKAIPNAKITVLHDKPFKKSCSAGPAGLF 53
>sp|O45307|OXDD2_CAEEL D-aspartate oxidase 2 OS=Caenorhabditis elegans GN=C47A10.5 PE=1
SV=2
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLF 75
K+AI+G G+IG STAL++ + P+ VTV++D+ T S G AGLF
Sbjct: 4 KIAIIGEGVIGCSTALQVAQAVPDARVTVLSDRPFEQTCSFGPAGLF 50
>sp|Q9Z302|OXDA_CRIGR D-amino-acid oxidase OS=Cricetulus griseus GN=DAO PE=2 SV=1
Length = 346
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCD---VTVIADKFNMDTTSDGAAGLFEP 77
+V ++GAG+IGLSTAL + RF + + AD+F TTSD AAG ++P
Sbjct: 2 RVVVIGAGVIGLSTALCIHERFSPVQPLHMKIYADRFTPFTTSDVAAGFWQP 53
>sp|P22942|OXDA_RABIT D-amino-acid oxidase OS=Oryctolagus cuniculus GN=DAO PE=2 SV=1
Length = 347
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNC----DVTVIADKFNMDTTSDGAAGLFEP 77
+V ++GAG+IGLSTAL + + + D+T+ AD+F T +D AAGL++P
Sbjct: 2 RVVVIGAGVIGLSTALCIHELYHSALQPLDMTIYADRFTPLTNTDVAAGLWQP 54
>sp|A8WXM1|OXDD1_CAEBR D-aspartate oxidase 1 OS=Caenorhabditis briggsae GN=CBG04460 PE=3
SV=1
Length = 331
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLF 75
K+A++G G+IG ++AL++ + PN +T+ DK ++ S G AGLF
Sbjct: 4 KIAVIGEGVIGCTSALQIAKAIPNSKITIFHDKPFENSCSAGPAGLF 50
>sp|A0R665|ETHA_MYCS2 FAD-containing monooxygenase EthA OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=ethA PE=3 SV=1
Length = 492
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 24 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSD 69
M + V I+GAGI G+STA LQ R P ++ + N+ T D
Sbjct: 1 MTEHFDVVIVGAGISGISTAWHLQDRCPTKSYVILERRANIGGTWD 46
>sp|G3XD12|HCNC_PSEAE Hydrogen cyanide synthase subunit HcnC OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=hcnC PE=1 SV=1
Length = 417
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 24 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDGAAGLF 75
M + + I G G+IG S A +L RR N + V+ DK + T A GL+
Sbjct: 1 MNRTYDIVIAGGGVIGASCAYQLSRR-GNLRIAVVDDKRPGNATRASAGGLW 51
>sp|O49901|ZDS_NARPS Zeta-carotene desaturase, chloroplastic/chromoplastic
OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1
Length = 574
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 6 SEFGVHSAAQSCPANPK-VMGSNHKVAILGAGIIGLSTALEL 46
S+ V++ P P+ G KVAI+GAG+ G+STA+EL
Sbjct: 42 SDMSVNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVEL 83
>sp|P80324|OXDA_RHOTO D-amino-acid oxidase OS=Rhodosporidium toruloides GN=DAO1 PE=1
SV=1
Length = 368
Score = 32.3 bits (72), Expect = 0.83, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 24 MGSNHKVAILGAGIIGLSTALELQRR 49
M S +V +LG+G+IGLS+AL L R+
Sbjct: 1 MHSQKRVVVLGSGVIGLSSALILARK 26
>sp|Q55GI5|L2HDH_DICDI L-2-hydroxyglutarate dehydrogenase, mitochondrial
OS=Dictyostelium discoideum GN=l2hgdh PE=3 SV=1
Length = 446
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 28 HKVAILGAGIIGLSTALELQRRFPNCDVTVI 58
+ VAI+G GI+GL+T EL +R P + ++
Sbjct: 26 YDVAIVGGGIVGLATGRELLKRNPKLKIVIL 56
>sp|O43029|FAP1_SCHPO L-pipecolate oxidase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=fap1 PE=1 SV=1
Length = 412
Score = 32.3 bits (72), Expect = 0.89, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 24 MGSNHKVAILGAGIIGLSTALELQRR 49
M N V I+GAG+ GLS ALEL +R
Sbjct: 1 MVKNTSVIIVGAGVFGLSAALELTKR 26
>sp|A7SMW7|L2HDH_NEMVE L-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Nematostella
vectensis GN=v1g172254 PE=3 SV=1
Length = 456
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 27 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSDG 70
++ VAI+G GI+GL+TA EL R P V+ + + G
Sbjct: 39 HYDVAIVGGGIVGLATARELILRHPKLTFCVLEKEKELSMHQSG 82
>sp|Q02YQ3|MURI_LACLS Glutamate racemase OS=Lactococcus lactis subsp. cremoris (strain
SK11) GN=murI PE=3 SV=1
Length = 271
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 27 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIAD 60
N + +L +G+ GL+ A EL R+ PN ++ I D
Sbjct: 3 NRPIGLLDSGVGGLTVARELLRQLPNEEIVYIGD 36
>sp|A2RKH0|MURI_LACLM Glutamate racemase OS=Lactococcus lactis subsp. cremoris (strain
MG1363) GN=murI PE=3 SV=1
Length = 271
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 27 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIAD 60
N + +L +G+ GL+ A EL R+ PN ++ I D
Sbjct: 3 NRPIGLLDSGVGGLTVARELLRQLPNEEIVYIGD 36
>sp|Q9CG28|MURI_LACLA Glutamate racemase OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=murI PE=3 SV=1
Length = 271
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 27 NHKVAILGAGIIGLSTALELQRRFPNCDVTVIAD 60
N + +L +G+ GL+ A EL R+ PN ++ I D
Sbjct: 3 NRPIGLLDSGVGGLTVARELLRQLPNEEIVYIGD 36
>sp|P46940|IQGA1_HUMAN Ras GTPase-activating-like protein IQGAP1 OS=Homo sapiens GN=IQGAP1
PE=1 SV=1
Length = 1657
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 15 QSCPANPKVMGSNHKVAILGAGIIGLSTALELQRRF--PNCDVTVIADKFNMDTTSD 69
Q +N +G N ++I+ LS + + RRF CDV + DKFN+D SD
Sbjct: 1233 QHAASNKMFLGDNAHLSIINEY---LSQSYQKFRRFFQTACDVPELQDKFNVDEYSD 1286
>sp|Q9FV46|ZDS_TARER Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes
erecta PE=2 SV=1
Length = 587
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 18 PANPK-VMGSNHKVAILGAGIIGLSTALEL 46
P P+ G KVAI+GAG+ G+STA+EL
Sbjct: 72 PPEPEHYRGPKLKVAIIGAGLAGMSTAVEL 101
>sp|Q9ZTP4|ZDS_MAIZE Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays
GN=ZDS1 PE=2 SV=1
Length = 570
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 18 PANPK-VMGSNHKVAILGAGIIGLSTALEL 46
P P+ G KVAI+GAG+ G+STA+EL
Sbjct: 54 PPEPEHYRGPKLKVAIIGAGLAGMSTAVEL 83
>sp|Q38893|ZDS_ARATH Zeta-carotene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=ZDS1 PE=1 SV=3
Length = 558
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 6 SEFGVHSAAQSCPANP-KVMGSNHKVAILGAGIIGLSTALEL 46
S+ V++ P P G KVAI+GAG+ G+STA+EL
Sbjct: 34 SDMSVNAPKGLFPPEPVPYKGPKLKVAIIGAGLAGMSTAVEL 75
>sp|Q10062|PPOX_SCHPO Protoporphyrinogen oxidase OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hem14 PE=3 SV=1
Length = 490
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 30 VAILGAGIIGLSTALELQRRFPNCDV 55
+AI G GI GLSTA L R P C +
Sbjct: 3 IAICGGGIAGLSTAFYLARLIPKCTI 28
>sp|O51940|PVDA_BURCE L-ornithine 5-monooxygenase OS=Burkholderia cepacia GN=pvdA PE=3
SV=1
Length = 444
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 25 GSNHKVAILGAGIIGLSTALELQRRFPNCDVTVI 58
G +VA++GAG ++L RRFP+ D ++
Sbjct: 201 GERRRVAVIGAGQSAAEVFIDLARRFPHVDANLV 234
>sp|Q9SMJ3|ZDS_CAPAN Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=ZDS PE=1 SV=1
Length = 588
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 18 PANPK-VMGSNHKVAILGAGIIGLSTALEL 46
P P+ G KVAI+GAG+ G+STA+EL
Sbjct: 69 PPEPEHYRGPKLKVAIIGAGLAGMSTAVEL 98
>sp|Q9SE20|ZDS_SOLLC Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=ZDS PE=2 SV=1
Length = 588
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 18 PANPK-VMGSNHKVAILGAGIIGLSTALEL 46
P P+ G KVAI+GAG+ G+STA+EL
Sbjct: 69 PPEPEHYRGPKLKVAIIGAGLAGMSTAVEL 98
>sp|P96223|ETHA_MYCTU FAD-containing monooxygenase EthA OS=Mycobacterium tuberculosis
GN=ethA PE=1 SV=1
Length = 489
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 24 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSD 69
M + V I+GAGI G+S A LQ R P ++ + +M T D
Sbjct: 1 MTEHLDVVIVGAGISGVSAAWHLQDRCPTKSYAILEKRESMGGTWD 46
>sp|Q7TVI2|ETHA_MYCBO FAD-containing monooxygenase EthA OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=ethA PE=1 SV=1
Length = 489
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 24 MGSNHKVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMDTTSD 69
M + V I+GAGI G+S A LQ R P ++ + +M T D
Sbjct: 1 MTEHLDVVIVGAGISGVSAAWHLQDRCPTKSYAILEKRESMGGTWD 46
>sp|Q95KC9|PCYOX_MACFA Prenylcysteine oxidase OS=Macaca fascicularis GN=PCYOX1 PE=2 SV=1
Length = 505
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 17 CPANPKVMGSNHKVAILGAGIIGLSTALELQRRF 50
CP ++ K+A++GAGI G S A L+++F
Sbjct: 24 CPEGAELRAPPDKIAVIGAGIGGTSAAYYLRQKF 57
>sp|Q9JKF1|IQGA1_MOUSE Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus GN=Iqgap1
PE=1 SV=2
Length = 1657
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 15 QSCPANPKVMGSNHKVAILGAGIIGLSTALELQRRFPN--CDVTVIADKFNMDTTSD 69
Q +N +G N ++I+ LS + + RRF CDV + DKFN+D SD
Sbjct: 1233 QHAASNKMFLGDNAHLSIINEY---LSQSYQKFRRFFQVACDVPELQDKFNVDEYSD 1286
>sp|Q7NWR6|DADA_CHRVO D-amino acid dehydrogenase small subunit OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=dadA PE=3 SV=1
Length = 435
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCDVTVIADKFNMD-TTSDGAAGLFEPSPNFMGP 84
KV +LG G++G+STA L + C VTV+ + + TS G AG + SP + P
Sbjct: 2 KVIVLGGGVLGVSTAWYLAK--AGCQVTVLERQDGVALETSFGNAG--QISPGYSAP 54
>sp|Q07YK6|PURT_SHEFN Phosphoribosylglycinamide formyltransferase 2 OS=Shewanella
frigidimarina (strain NCIMB 400) GN=purT PE=3 SV=1
Length = 396
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 29 KVAILGAGIIGLSTALELQR---------RFPNCDVTVIADKFNMDTTSDGAA--GLFE- 76
K +LG G +G A+ELQR R+PN IA +F++ D A + E
Sbjct: 17 KAMLLGCGELGKEVAIELQRYGIEVIGVDRYPNAPAMQIAHRFHVINMLDAKALKAVIEL 76
Query: 77 PSPNFMGPDLE 87
P+ + P++E
Sbjct: 77 EKPDLVIPEIE 87
>sp|A8LEP9|ACDH2_FRASN Acetaldehyde dehydrogenase 2 OS=Frankia sp. (strain EAN1pec)
GN=Franean1_4744 PE=3 SV=1
Length = 308
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Query: 28 HKVAILGAGIIGLSTALELQRRF------------PNCDVTVIADKFNMDTTSDGAAGLF 75
+VAI+G+G IG ++++RR P D A + + TTSDG AGL
Sbjct: 2 QQVAIIGSGNIGTDLLIKIKRRSESLSVAAMVGIDPESDGLARARRLGVATTSDGVAGLL 61
>sp|Q99042|OXDA_TRIVR D-amino-acid oxidase OS=Trigonopsis variabilis GN=DAO1 PE=3 SV=1
Length = 356
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 25/32 (78%), Gaps = 2/32 (6%)
Query: 29 KVAILGAGIIGLSTALELQRRFPNCDVTVIAD 60
K+ ++GAG+ GL+TAL+L R+ +VT++++
Sbjct: 3 KIVVIGAGVAGLTTALQLLRK--GHEVTIVSE 32
>sp|A6Q186|PURT_NITSB Phosphoribosylglycinamide formyltransferase 2 OS=Nitratiruptor
sp. (strain SB155-2) GN=purT PE=3 SV=1
Length = 388
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
Query: 21 PKVMGSNH-KVAILGAGIIGLSTALELQR---------RFPNCDVTVIADK---FNMDTT 67
P + SN K +LG+G +G A+E QR R+PN ++A + +M +
Sbjct: 4 PAPLKSNSIKFLLLGSGELGKEVAIEAQRLGIEVVAVDRYPNAPAHLVAHRSYVIDMKSK 63
Query: 68 SDGAAGLFEPSPNFMGPDLE 87
+F P+++ P++E
Sbjct: 64 EQVLEVIFREKPDYILPEIE 83
>sp|Q8ZNW5|PURT_SALTY Phosphoribosylglycinamide formyltransferase 2 OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=purT PE=3 SV=1
Length = 392
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 29 KVAILGAGIIGLSTALELQR---------RFPNCDVTVIADKFNMDTTSDGAA---GLFE 76
+V +LGAG +G A+E QR R+P+ +A + ++ DG A + E
Sbjct: 14 RVMLLGAGELGKEVAIECQRLGIEVIAVDRYPDAPAMHVAHRSHVINMLDGEALRHVITE 73
Query: 77 PSPNFMGPDLE 87
P+++ P++E
Sbjct: 74 EKPHYIVPEIE 84
>sp|C0Q2G8|PURT_SALPC Phosphoribosylglycinamide formyltransferase 2 OS=Salmonella
paratyphi C (strain RKS4594) GN=purT PE=3 SV=1
Length = 392
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 29 KVAILGAGIIGLSTALELQR---------RFPNCDVTVIADKFNMDTTSDGAA---GLFE 76
+V +LGAG +G A+E QR R+P+ +A + ++ DG A + E
Sbjct: 14 RVMLLGAGELGKEVAIECQRLGIEVIAVDRYPDAPAMHVAHRSHVINMLDGEALRHVITE 73
Query: 77 PSPNFMGPDLE 87
P+++ P++E
Sbjct: 74 EKPHYIVPEIE 84
>sp|Q57NB7|PURT_SALCH Phosphoribosylglycinamide formyltransferase 2 OS=Salmonella
choleraesuis (strain SC-B67) GN=purT PE=3 SV=1
Length = 392
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 29 KVAILGAGIIGLSTALELQR---------RFPNCDVTVIADKFNMDTTSDGAA---GLFE 76
+V +LGAG +G A+E QR R+P+ +A + ++ DG A + E
Sbjct: 14 RVMLLGAGELGKEVAIECQRLGIEVIAVDRYPDAPAMHVAHRSHVINMLDGEALRHVITE 73
Query: 77 PSPNFMGPDLE 87
P+++ P++E
Sbjct: 74 EKPHYIVPEIE 84
>sp|Q8Z5X3|PURT_SALTI Phosphoribosylglycinamide formyltransferase 2 OS=Salmonella typhi
GN=purT PE=3 SV=1
Length = 392
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 29 KVAILGAGIIGLSTALELQR---------RFPNCDVTVIADKFNMDTTSDGAA---GLFE 76
+V +LGAG +G A+E QR R+P+ +A + ++ DG A + E
Sbjct: 14 RVMLLGAGELGKEVAIECQRLGIEVIAVDRYPDAPAMHVAHRSHVINMLDGEALRHVITE 73
Query: 77 PSPNFMGPDLE 87
P+++ P++E
Sbjct: 74 EKPHYIVPEIE 84
>sp|B5BH72|PURT_SALPK Phosphoribosylglycinamide formyltransferase 2 OS=Salmonella
paratyphi A (strain AKU_12601) GN=purT PE=3 SV=1
Length = 392
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 29 KVAILGAGIIGLSTALELQR---------RFPNCDVTVIADKFNMDTTSDGAA---GLFE 76
+V +LGAG +G A+E QR R+P+ +A + ++ DG A + E
Sbjct: 14 RVMLLGAGELGKEVAIECQRLGIEVIAVDRYPDAPAMHVAHRSHVINMLDGEALRHVITE 73
Query: 77 PSPNFMGPDLE 87
P+++ P++E
Sbjct: 74 EKPHYIVPEIE 84
>sp|Q5PIA0|PURT_SALPA Phosphoribosylglycinamide formyltransferase 2 OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=purT PE=3
SV=1
Length = 392
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 29 KVAILGAGIIGLSTALELQR---------RFPNCDVTVIADKFNMDTTSDGAA---GLFE 76
+V +LGAG +G A+E QR R+P+ +A + ++ DG A + E
Sbjct: 14 RVMLLGAGELGKEVAIECQRLGIEVIAVDRYPDAPAMHVAHRSHVINMLDGEALRHVITE 73
Query: 77 PSPNFMGPDLE 87
P+++ P++E
Sbjct: 74 EKPHYIVPEIE 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,850,463
Number of Sequences: 539616
Number of extensions: 1171372
Number of successful extensions: 4870
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 4801
Number of HSP's gapped (non-prelim): 154
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)