Your job contains 1 sequence.
>psy17040
MATTSLRSILTRGWNLVEPDVYLGFISTITWIVLFLTISMLVITSSTLFSPRVMLFIFAL
PVMQVILFCLAIGRDPTGLHLAIVNQEMDWATKACPVLSNCSFTHLSCRYLNSLPNDTII
KDYYPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLGRDADEETLDQSEIRVWLDMS
NQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEPIYGSNDPSFTDFVAPGV
ILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQFVVMCGQTALVLI
FMIFVFGVECKGDLLLVIILTILQGLCGMCFVFGRKNIFEWKLYNGNKKQDSYG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17040
(354 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039594 - symbol:CG9990 species:7227 "Drosophila m... 1041 3.6e-105 1
FB|FBgn0053970 - symbol:CG33970 species:7227 "Drosophila ... 722 2.3e-71 1
ZFIN|ZDB-GENE-050517-42 - symbol:abch1 "ATP-binding casse... 500 7.7e-48 1
FB|FBgn0031734 - symbol:CG11147 species:7227 "Drosophila ... 489 1.6e-46 1
DICTYBASE|DDB_G0269026 - symbol:abcG23 "ABC transporter G... 259 5.5e-21 1
DICTYBASE|DDB_G0267430 - symbol:abcG20 "ABC transporter G... 255 6.5e-20 1
TIGR_CMR|DET_0814 - symbol:DET_0814 "ABC transporter, per... 144 8.7e-08 1
TIGR_CMR|DET_0795 - symbol:DET_0795 "ABC transporter, per... 121 9.3e-07 2
TIGR_CMR|DET_0519 - symbol:DET_0519 "ABC transporter, per... 116 6.1e-05 2
UNIPROTKB|P0AFP9 - symbol:ybhR species:83333 "Escherichia... 112 0.00018 2
TIGR_CMR|BA_2542 - symbol:BA_2542 "ABC transporter, perme... 113 0.00087 1
>FB|FBgn0039594 [details] [associations]
symbol:CG9990 species:7227 "Drosophila melanogaster"
[GO:0043190 "ATP-binding cassette (ABC) transporter complex"
evidence=ISS] [GO:0005215 "transporter activity" evidence=ISS]
[GO:0042626 "ATPase activity, coupled to transmembrane movement of
substances" evidence=ISS] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR000412 InterPro:IPR003439
InterPro:IPR003593 InterPro:IPR013525 InterPro:IPR017871
Pfam:PF00005 Pfam:PF01061 PROSITE:PS00211 PROSITE:PS50893
PROSITE:PS51012 SMART:SM00382 EMBL:AE014297 GO:GO:0005886
GO:GO:0005524 GO:GO:0006200 GO:GO:0042626
GeneTree:ENSGT00700000104032 OMA:FAVALMH FlyBase:FBgn0039594
UniGene:Dm.16358 GeneID:43391 KEGG:dme:Dmel_CG9990 GenomeRNAi:43391
NextBio:833684 RefSeq:NP_651628.1 ProteinModelPortal:Q9VAU1
SMR:Q9VAU1 PRIDE:Q9VAU1 EnsemblMetazoa:FBtr0085308 UCSC:CG9990-RA
InParanoid:Q9VAU1 PhylomeDB:Q9VAU1 ArrayExpress:Q9VAU1 Bgee:Q9VAU1
Uniprot:Q9VAU1
Length = 808
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 201/282 (71%), Positives = 233/282 (82%)
Query: 53 VMLFIFALPVMQVILFCLAIGRDPTGLHLAIVNQEM-DWATKACPVLSNCSFTHLSCRYL 111
VMLFIFALPVMQVILFCLAIGRDP GL+LAIVN EM D + C C F +L CRYL
Sbjct: 430 VMLFIFALPVMQVILFCLAIGRDPQGLNLAIVNGEMNDTVRENCYWEDGCHFKNLGCRYL 489
Query: 112 NSLPNDTIIKDYYPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLGRDADEETLDQS 171
+ L N +++K YY D + A AVR G AWGA+Y ++NFTDA +AR LGRD+D+ET+D S
Sbjct: 490 SHL-NTSVVKTYYEDLDDAKEAVRKGTAWGAVYISENFTDAFIARANLGRDSDDETIDSS 548
Query: 172 EIRVWLDMSNQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEPIYGSNDPS 231
E++VWLDMSNQQIG+MLNRD+QL++RDFA LL C NPK+ D+PIQF++PIYG+ +PS
Sbjct: 549 EVKVWLDMSNQQIGVMLNRDIQLAFRDFAMGLLGQCGSNPKLGDVPIQFRDPIYGTMNPS 608
Query: 232 FTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQFVVM 291
FTDFVAPGVILTIVFFLAVALTSSALIIER EGLLDRSWVAGV+P EILFSHVITQFVVM
Sbjct: 609 FTDFVAPGVILTIVFFLAVALTSSALIIERTEGLLDRSWVAGVSPFEILFSHVITQFVVM 668
Query: 292 CGQTALVLIFMIFVFGVECKGDLLLVIILTILQGLCGMCFVF 333
CGQT LVLIFM+ VFGV GDL VI+LT+LQG+CGMCF F
Sbjct: 669 CGQTTLVLIFMLVVFGVTNNGDLFWVIVLTLLQGMCGMCFGF 710
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 26/43 (60%), Positives = 39/43 (90%)
Query: 1 MATTSLRSILTRGWNLVEPDVYLGFISTITWIVLFLTISMLVI 43
+AT+SLRSILTRGW ++E DVY+G++ST++WIV FL +++LV+
Sbjct: 761 LATSSLRSILTRGWAILESDVYIGYVSTLSWIVGFLVLTLLVL 803
>FB|FBgn0053970 [details] [associations]
symbol:CG33970 species:7227 "Drosophila melanogaster"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] [GO:0042626 "ATPase activity, coupled to
transmembrane movement of substances" evidence=ISS] [GO:0043190
"ATP-binding cassette (ABC) transporter complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000412
InterPro:IPR003439 InterPro:IPR003593 InterPro:IPR017871
Pfam:PF00005 PROSITE:PS00211 PROSITE:PS50893 PROSITE:PS51012
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0016020
GO:GO:0006200 GO:GO:0042626 eggNOG:COG1131
GeneTree:ENSGT00700000104032 EMBL:BT003531 RefSeq:NP_001034071.1
UniGene:Dm.1342 SMR:Q86P18 EnsemblMetazoa:FBtr0100012 GeneID:43186
KEGG:dme:Dmel_CG33970 UCSC:CG33970-RA FlyBase:FBgn0053970
InParanoid:Q86P18 OMA:SILQRGW OrthoDB:EOG4M0CGN ChiTaRS:CG33970
GenomeRNAi:43186 NextBio:832620 Uniprot:Q86P18
Length = 777
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 145/285 (50%), Positives = 193/285 (67%)
Query: 53 VMLFIFALPVMQVILFCLAIGRDPTGLHLAIVNQEMDWAT---KACPVLSNCSFTHLSCR 109
VMLFI LPV+Q++LFC AIG DPTGL LA+ N EM + CPV + C+ T LSCR
Sbjct: 395 VMLFIVGLPVVQILLFCYAIGHDPTGLKLAVANHEMSGEMIMEQFCPVHTGCNQTMLSCR 454
Query: 110 YLNSL-PNDTIIKDYYPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLGRDADEETL 168
YL+ L N +++ Y D E A VR G AW AL N+T +L+ R+ GR A++ T+
Sbjct: 455 YLDMLVKNKSMVVQYVTDDEMAYEEVRKGRAWAALVIQPNYTASLMERVEDGRYAEDGTI 514
Query: 169 DQSEIRVWLDMSNQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEPIYGSN 228
+ S++ V +D SNQQI +L RDLQ ++ +F D+LS CD NPK+ +P+ F+ P+YG
Sbjct: 515 ESSDLAVRMDWSNQQISQLLYRDLQYTFFNFVGDMLSDCDVNPKLGRVPVDFQHPVYGYR 574
Query: 229 DPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQF 288
+P+FTDF APGVILTI+FFLAVA+TS A++I+R EG+L+R VAG+T EIL S V+TQF
Sbjct: 575 NPNFTDFAAPGVILTIIFFLAVAVTSGAMLIDRNEGMLERCLVAGITGPEILLSQVVTQF 634
Query: 289 VVMCGQTALVLIFMIFVFGVECKGDLLLVIILTILQGLCGMCFVF 333
VM QT VLI + F + G++ LV+ L IL GLCGM F F
Sbjct: 635 TVMLSQTTFVLIVSFYFFELTLVGNIWLVVALCILNGLCGMSFGF 679
>ZFIN|ZDB-GENE-050517-42 [details] [associations]
symbol:abch1 "ATP-binding cassette, sub-family H,
member 1" species:7955 "Danio rerio" [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0042626
"ATPase activity, coupled to transmembrane movement of substances"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
InterPro:IPR000412 InterPro:IPR003439 InterPro:IPR003593
InterPro:IPR013526 InterPro:IPR017871 Pfam:PF00005 PRINTS:PR00164
PROSITE:PS00211 PROSITE:PS50893 PROSITE:PS51012 SMART:SM00382
ZFIN:ZDB-GENE-050517-42 GO:GO:0005524 GO:GO:0016020 GO:GO:0006200
GO:GO:0042626 GeneTree:ENSGT00700000104032 EMBL:CR352220
IPI:IPI00502581 Ensembl:ENSDART00000135086 Uniprot:F1QZ58
Length = 705
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 108/284 (38%), Positives = 163/284 (57%)
Query: 51 PRVMLFIFALPVMQVILFCLAIGRDPTGLHLAIVNQEMD---WATKACPVLSNCSFTHLS 107
P + F F LPV+Q+ L CL IG DP + +A+VN E ++ L N S +
Sbjct: 333 PGSLCFQFLLPVIQICLMCLCIGGDPKNIDVAVVNNESSPSAFSRSLLSFLDNTSINQIG 392
Query: 108 CRYLNSLPNDTIIKDYYPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLGRDADEET 167
R+ ++ + D A + +R G+ WG + F +NFT L RM+ R E
Sbjct: 393 ERFPFCFLQVSLS---HSD---AFDGIRNGEYWGVIEFGENFTSYLTKRMLQPR-VSREV 445
Query: 168 LDQSEIRVWLDMSNQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEPIYGS 227
++ + WLD++N+QI LML + L ++ F + L + + +PI+F+EPIYGS
Sbjct: 446 VEGGSVHAWLDLTNRQIALMLQKKLHQAFEAFMEKRLGSMSY---MVAVPIKFEEPIYGS 502
Query: 228 NDPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQ 287
+ FT FV PG +L+I F+LAV LT+ + ++ER EGLLDR WVAGV+ LE + +H+ +Q
Sbjct: 503 KNTDFTTFVTPGAVLSITFYLAVGLTALSFVLERKEGLLDRCWVAGVSSLETMLAHLFSQ 562
Query: 288 FVVMCGQTALVLIFMIFVFGVECKGDLLLVIILTILQGLCGMCF 331
V+ Q L+LIF + VF + +G L LVI L +LQG+ G+ F
Sbjct: 563 LFVISVQIILLLIFTLLVFNIPNEGSLALVISLIVLQGVTGISF 606
>FB|FBgn0031734 [details] [associations]
symbol:CG11147 species:7227 "Drosophila melanogaster"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0043190
"ATP-binding cassette (ABC) transporter complex" evidence=ISS]
[GO:0042626 "ATPase activity, coupled to transmembrane movement of
substances" evidence=ISS] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000412 InterPro:IPR003439
InterPro:IPR003593 InterPro:IPR017871 Pfam:PF00005 PROSITE:PS00211
PROSITE:PS50893 PROSITE:PS51012 SMART:SM00382 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0016020 GO:GO:0006200
GO:GO:0042626 eggNOG:COG1131 GeneTree:ENSGT00700000104032
EMBL:BT010210 RefSeq:NP_608954.1 RefSeq:NP_723114.1
UniGene:Dm.22471 SMR:Q9VMM9 EnsemblMetazoa:FBtr0079165
EnsemblMetazoa:FBtr0079166 GeneID:33803 KEGG:dme:Dmel_CG11147
UCSC:CG11147-RA FlyBase:FBgn0031734 InParanoid:Q9VMM9 OMA:MVFFLAT
OrthoDB:EOG4KD522 GenomeRNAi:33803 NextBio:785336 Uniprot:Q9VMM9
Length = 711
Score = 489 (177.2 bits), Expect = 1.6e-46, P = 1.6e-46
Identities = 99/295 (33%), Positives = 171/295 (57%)
Query: 48 LF-SPRVMLFIFALPVMQVILFCLAIGRDPTGLHLAIVNQEMD-----WATKACPVLSN- 100
LF P ++F+ P++Q+ F LAIG+ PT L + + + E++ + V +
Sbjct: 318 LFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNLEIGVYSGEVENYGECFDENLVTVYKDS 377
Query: 101 ----CSFTHLSCRYLNSLPNDTIIKDYYPDPESAINAVRVGDAWGALYFTDNFTDALVAR 156
C F LSCRY+ L +D + YY A+N + G L+F NF+D++++
Sbjct: 378 DNESCLFNKLSCRYIRVLGDDVATRKYYASEADALNDAKRATTVGYLHFAQNFSDSILSV 437
Query: 157 MVLGRDADEETLDQSEIRVWLDMSNQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADI 216
M G + + +D +E+ + +DM++QQ+ + R L+ + F + ++ C+ + I D+
Sbjct: 438 MEDGIHSSDGAVDHAELSIHIDMTDQQVAYFMQRKLRDKFSTFMRSVVKDCNVSTAIVDL 497
Query: 217 PIQFKEPIYGSNDPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTP 276
P+QF+EPI+GS D F + APGV++T+VFFLA +T++ I ERM+G+ DR+ +AGV+
Sbjct: 498 PVQFQEPIFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVFISERMDGIWDRTLLAGVSA 557
Query: 277 LEILFSHVITQFVVMCGQTALVLIFMIFVFGVECKGDLLLVIILTILQGLCGMCF 331
E+L++H++TQ ++M Q+ V++++ VF GD +I L L CGM F
Sbjct: 558 TEMLWAHLLTQLIIMALQSFEVIMYIGLVFDTYNNGDTTTLIGLLTLTAFCGMLF 612
>DICTYBASE|DDB_G0269026 [details] [associations]
symbol:abcG23 "ABC transporter G family protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR003439
InterPro:IPR003593 InterPro:IPR017871 Pfam:PF00005 PROSITE:PS00211
PROSITE:PS50893 PROSITE:PS51012 SMART:SM00382
dictyBase:DDB_G0269026 GO:GO:0016021 GO:GO:0005524
GenomeReviews:CM000150_GR GO:GO:0006810 GO:GO:0006200
EMBL:AAFI02000004 eggNOG:COG1131 GO:GO:0016887
ProtClustDB:CLSZ2431495 RefSeq:XP_647042.2
ProteinModelPortal:Q55EH8 STRING:Q55EH8 EnsemblProtists:DDB0304677
GeneID:8616737 KEGG:ddi:DDB_G0269026 InParanoid:Q55EH8 OMA:FAVALMH
Uniprot:Q55EH8
Length = 701
Score = 259 (96.2 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 61/235 (25%), Positives = 119/235 (50%)
Query: 98 LSNCSFTHLSCRYLNSLPNDTIIKDYYP--DPESAINAVRVGDAWGALYFTDNFTDALVA 155
+ N LS ++N+L + I ++ D +AI + D WG + NFT+ ++
Sbjct: 366 IKNIDSGSLSGDFINALSDGNNIFNFIQINDTSNAIQMIESSDLWGLIDIPVNFTNGMIN 425
Query: 156 RMVLGRDADEETLDQSEIRVWLDMSNQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIAD 215
++ + E++ + SE+ +++D+SN Q+ LM++ Q ++ A D K+
Sbjct: 426 KLF---NPLEKSFENSEMEIYMDLSNFQMNLMVDVQFQKAFNKIAND------SGIKL-- 474
Query: 216 IPIQFKEPIYGSNDPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVT 275
+P F +YG + +F F+AP +I I + + S + E+ +G DR + GV+
Sbjct: 475 LPTNF-HAVYGDQNANFNWFLAPAMICIITYVHCMNFLSITFVREKNDGTRDRILLYGVS 533
Query: 276 PLEILFSHVITQFVVMCGQTALVLIFMIFVFGVECKGDLLLVIILTILQGLCGMC 330
P+ + H++ ++ Q ++ L+ +F FGV KG+++L+ + IL GMC
Sbjct: 534 PVSNVLGHILAHIPILLVQFSIQLLIAVFAFGVPIKGNIVLIYLFFILINTVGMC 588
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 46/175 (26%), Positives = 83/175 (47%)
Query: 31 WIVLFLTISMLVITSS-TLFSPRVMLFIFALPVMQVILFCLAIGRDPTGLHLAIVNQEMD 89
W +TIS+ +T L P ++F P + + LF LAIG P L I N +D
Sbjct: 315 WFSHSITISIRKLTQMYRLKFP--LVFEIISPSLLITLFFLAIGNVPHDLKFGIKN--ID 370
Query: 90 WATKACPVLSNCSFTHLSCRYLNSLPNDTIIKDYYP--DPESAINAVRVGDAWGALYFTD 147
+ LS ++N+L + I ++ D +AI + D WG +
Sbjct: 371 SGS-------------LSGDFINALSDGNNIFNFIQINDTSNAIQMIESSDLWGLIDIPV 417
Query: 148 NFTDALVARMVLGRDADEETLDQSEIRVWLDMSNQQIGLMLNRDLQLSYRDFAQD 202
NFT+ ++ ++ + E++ + SE+ +++D+SN Q+ LM++ Q ++ A D
Sbjct: 418 NFTNGMINKLF---NPLEKSFENSEMEIYMDLSNFQMNLMVDVQFQKAFNKIAND 469
>DICTYBASE|DDB_G0267430 [details] [associations]
symbol:abcG20 "ABC transporter G family protein"
species:44689 "Dictyostelium discoideum" [GO:0043190 "ATP-binding
cassette (ABC) transporter complex" evidence=ISS] [GO:0042626
"ATPase activity, coupled to transmembrane movement of substances"
evidence=IEA;ISS] [GO:0006810 "transport" evidence=IEA;ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000412
InterPro:IPR003439 InterPro:IPR003593 InterPro:IPR013525
InterPro:IPR013526 InterPro:IPR017871 Pfam:PF00005 Pfam:PF01061
PRINTS:PR00164 PROSITE:PS00211 PROSITE:PS50893 PROSITE:PS51012
SMART:SM00382 dictyBase:DDB_G0267430 GO:GO:0016021 GO:GO:0005524
GenomeReviews:CM000150_GR EMBL:AAFI02000003 GO:GO:0042626
eggNOG:COG1131 GO:GO:0043190 EMBL:AF482397 RefSeq:XP_647230.1
ProteinModelPortal:Q8T674 PRIDE:Q8T674 EnsemblProtists:DDB0191238
GeneID:8616035 KEGG:ddi:DDB_G0267430 OMA:RHRTALY
ProtClustDB:CLSZ2431495 Uniprot:Q8T674
Length = 730
Score = 255 (94.8 bits), Expect = 6.5e-20, P = 6.5e-20
Identities = 63/222 (28%), Positives = 117/222 (52%)
Query: 110 YLNSLPNDTIIKDY-YPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLGRDADEETL 168
Y+NSL N I + Y AI ++ G+++G L F++A++ + + +
Sbjct: 407 YINSLSNTGIFNFHNYNSTTEAIEQIKSGNSFGLLDINAQFSEAILENFM---NLSQYN- 462
Query: 169 DQSEIRVWLDMSNQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEP-IYGS 227
+I +++D +N QI L++ + L LS+ A+ Q I PI+ P +YG+
Sbjct: 463 PNGQIDLYMDFTNYQITLIVEQQLALSFETLAK-------QQANITMNPIKTVTPTVYGN 515
Query: 228 NDPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQ 287
+ F DF+APG++ I F A+++TS + + E+++G LDR + GV I+F H +
Sbjct: 516 PNSKFIDFLAPGMVCLISFAHAISITSVSFVKEKVDGSLDRLFAYGVRTSSIVFGHFLGH 575
Query: 288 FVVMCGQTALVLIFMIFVFGVECKGDLLLVIILTILQGLCGM 329
++ Q ++L+ I+ F V +G++ LV ++T+ GM
Sbjct: 576 LPLLLVQITVLLLIAIYGFNVPIEGNIALVFLMTVSLAFVGM 617
>TIGR_CMR|DET_0814 [details] [associations]
symbol:DET_0814 "ABC transporter, permease protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006810
"transport" evidence=ISS] [GO:0042626 "ATPase activity, coupled to
transmembrane movement of substances" evidence=ISS]
InterPro:IPR000412 InterPro:IPR013525 Pfam:PF01061 PROSITE:PS51012
GO:GO:0005524 GO:GO:0016020 GO:GO:0042626 eggNOG:COG0842
EMBL:CP000027 GenomeReviews:CP000027_GR KO:K09686
HOGENOM:HOG000021525 OMA:DYIAPAM RefSeq:YP_181542.1 STRING:Q3Z8A7
TCDB:9.B.74.2.2 GeneID:3229920 KEGG:det:DET0814 PATRIC:21608687
ProtClustDB:CLSK837300 BioCyc:DETH243164:GJNF-815-MONOMER
Uniprot:Q3Z8A7
Length = 241
Score = 144 (55.7 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 27/95 (28%), Positives = 56/95 (58%)
Query: 229 DPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQF 288
D + D++AP ++ T+ F + LT + + E +G ++R A V+ L+I+ +++ F
Sbjct: 42 DATVLDYIAPAMLATLALFFSFLLTGISFLRETSQGTMERLMAAPVSRLDIVAGYLLGFF 101
Query: 289 VVMCGQTALVLIFMIFVFGVECKGDLLLVIILTIL 323
V QT ++++F I+V GV +G+L +++ +L
Sbjct: 102 VFALLQTLIIVLFTIYVLGVNFQGELWQILLFQVL 136
>TIGR_CMR|DET_0795 [details] [associations]
symbol:DET_0795 "ABC transporter, permease protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006810
"transport" evidence=ISS] [GO:0042626 "ATPase activity, coupled to
transmembrane movement of substances" evidence=ISS]
InterPro:IPR000412 PROSITE:PS51012 GO:GO:0005524 GO:GO:0016020
GO:GO:0042626 eggNOG:COG0842 EMBL:CP000027
GenomeReviews:CP000027_GR KO:K01992 RefSeq:YP_181527.1
ProteinModelPortal:Q3Z8C2 STRING:Q3Z8C2 GeneID:3229854
KEGG:det:DET0795 PATRIC:21608651 HOGENOM:HOG000275362 OMA:RESTIAP
ProtClustDB:CLSK935601 BioCyc:DETH243164:GJNF-796-MONOMER
Uniprot:Q3Z8C2
Length = 339
Score = 121 (47.7 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 210 NPKIADIPIQFK--EPIYGSNDPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLD 267
N +I P+ F+ E + D S F PGV+ + FL + ++ LI +R + +L
Sbjct: 121 NREITQTPVLFEISEETIQTKDMSMMSFFIPGVLAMSIMFLGI-YSAMPLIQQREKKILK 179
Query: 268 RSWVAGVTPLEILFSHVITQFVVMCGQTALVLIFMIFVFGVECKGDLLLVIILTIL 323
R + ++ I+FS V+ + + QT ++++ +FGVE G+ L++ L +L
Sbjct: 180 RLGASPISRSTIIFSQVVLRLGLAVLQTVIIIVIGQLMFGVEILGNWWLLLGLVML 235
Score = 59 (25.8 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 54 MLFIFALPVMQVILFCLAI-GRDPTGLHLAIVNQE 87
M F A PV+ +I+F L G D +A+VN++
Sbjct: 1 MFFTLAFPVLFIIMFGLVFSGTDKINYDVALVNED 35
>TIGR_CMR|DET_0519 [details] [associations]
symbol:DET_0519 "ABC transporter, permease protein,
putative" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0006810 "transport" evidence=ISS] [GO:0042626 "ATPase activity,
coupled to transmembrane movement of substances" evidence=ISS]
InterPro:IPR000412 PROSITE:PS51012 GO:GO:0005524 GO:GO:0016020
GO:GO:0042626 eggNOG:COG0842 EMBL:CP000027
GenomeReviews:CP000027_GR KO:K09686 RefSeq:YP_181263.1
STRING:Q3Z936 GeneID:3230180 KEGG:det:DET0519 PATRIC:21608105
HOGENOM:HOG000275419 OMA:ITNIDFI ProtClustDB:CLSK837449
BioCyc:DETH243164:GJNF-519-MONOMER Uniprot:Q3Z936
Length = 365
Score = 116 (45.9 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 35/141 (24%), Positives = 73/141 (51%)
Query: 191 DLQLSYRDFAQDLLSTCDQNPKIADIPIQFK-EPIYGSNDPSFTDFVAPGVILTIVFFLA 249
D+Q + +Q L + C KI +IP+ +P+ N + DF++PG+I VF L
Sbjct: 129 DIQAAGEILSQ-LNAVCRAFAKI-EIPLSINAQPVNIENKITNIDFISPGII---VFGLL 183
Query: 250 VALTSSALII--ERMEGLLDRSWVAGVTPLEILFSHVITQFVVMCGQTALVLIFMI--FV 305
+ + +SA I+ ++ +G + R P++ + + ++ + Q ++ FM+ ++
Sbjct: 184 ILIPTSARIMVRDKEKGFMSRMLTTPSRPVDFILGYSLSMTFICIIQ---IIFFMLLGYL 240
Query: 306 FGVECKGDLLLVIILTILQGL 326
FG++ G++ L ++ L GL
Sbjct: 241 FGMDITGNIALAFLIFFLTGL 261
Score = 48 (22.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 17/78 (21%), Positives = 35/78 (44%)
Query: 47 TLFSPRVMLFIFALPVMQVILFCLAI-GRDPTGLHLAIVNQEMDWATKACP--VLSNCSF 103
T P + F+ P+M ++LF A G + +++++ + A L N
Sbjct: 14 TYRDPMALGFLLGFPLMFMLLFGFAFSGEGSASYQIGVIDEDQTPVSIAFADEALPNVPA 73
Query: 104 THLSCRYLNSLPNDTIIK 121
+S Y+N+ P++ + K
Sbjct: 74 YEIS--YINT-PDEALTK 88
>UNIPROTKB|P0AFP9 [details] [associations]
symbol:ybhR species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0042626 "ATPase activity, coupled to transmembrane movement of
substances" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR000412 InterPro:IPR013526
PRINTS:PR00164 PROSITE:PS51012 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006974 GO:GO:0042626 eggNOG:COG0842
PIR:H64815 RefSeq:NP_415313.1 RefSeq:YP_489065.1
ProteinModelPortal:P0AFP9 DIP:DIP-48088N DNASU:945403
EnsemblBacteria:EBESCT00000002542 EnsemblBacteria:EBESCT00000016448
GeneID:12932840 GeneID:945403 KEGG:ecj:Y75_p0765 KEGG:eco:b0792
PATRIC:32116785 EchoBASE:EB3438 EcoGene:EG13674
HOGENOM:HOG000270979 KO:K01992 OMA:ALEVFIT ProtClustDB:CLSK879768
BioCyc:EcoCyc:YBHR-MONOMER BioCyc:ECOL316407:JW5803-MONOMER
Genevestigator:P0AFP9 Uniprot:P0AFP9
Length = 368
Score = 112 (44.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 38/161 (23%), Positives = 71/161 (44%)
Query: 166 ETLDQSEIRVWLDMSNQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEPIY 225
+T + +++ LD N + LQ +++ Q+LL + PK + + + Y
Sbjct: 110 DTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELL---EGKPKPNNSELVVRN-WY 165
Query: 226 GSNDPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVI 285
N + FV P +I I + +TS ++ ER +G LD+ V+ +T +I +
Sbjct: 166 NPN-LDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAV 224
Query: 286 TQFVVMCGQTALVLIFMIFVFGVECKGDLLLVIILTILQGL 326
+V Q +VL I+ + + G L L ++ GL
Sbjct: 225 PALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGL 265
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 46 STLFSPRVMLFIFALPVM-QVILFCLAIGRDPTGLHLAIVNQEM-DWATKACPVLSNCS- 102
S L P+ I LPV+ QVILF A + T +AI +++ + + + + S
Sbjct: 15 SLLREPQTRA-ILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEHSVELTQRFARASA 73
Query: 103 FTHL 106
FTH+
Sbjct: 74 FTHV 77
>TIGR_CMR|BA_2542 [details] [associations]
symbol:BA_2542 "ABC transporter, permease protein,
putative" species:198094 "Bacillus anthracis str. Ames" [GO:0006810
"transport" evidence=ISS] InterPro:IPR000412 PROSITE:PS51012
GO:GO:0005524 GO:GO:0016020 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0042626 KO:K01992
RefSeq:NP_844910.1 RefSeq:YP_019181.1 RefSeq:YP_028626.1
DNASU:1085735 EnsemblBacteria:EBBACT00000010181
EnsemblBacteria:EBBACT00000016190 EnsemblBacteria:EBBACT00000024202
GeneID:1085735 GeneID:2816120 GeneID:2851103 KEGG:ban:BA_2542
KEGG:bar:GBAA_2542 KEGG:bat:BAS2365 HOGENOM:HOG000271973
OMA:ASIYEYS ProtClustDB:CLSK916683
BioCyc:BANT260799:GJAJ-2431-MONOMER
BioCyc:BANT261594:GJ7F-2519-MONOMER Uniprot:Q81Q91
Length = 339
Score = 113 (44.8 bits), Expect = 0.00087, P = 0.00087
Identities = 35/164 (21%), Positives = 74/164 (45%)
Query: 168 LDQSEIRVWLDMSNQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEPIY-- 225
L+ ++ + + N ++ ++L R Q L + ++N DI I E Y
Sbjct: 80 LENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTEKN----DISIMKPEVNYLH 135
Query: 226 GSNDPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVI 285
GS D + D + P +I FF L+ + + ER+ G L+R + EI+ ++I
Sbjct: 136 GSKDFTMFDGLGPVLIGFFTFFFVFILSGVSFVRERLSGALERLLSTPIKRWEIVVGYII 195
Query: 286 TQFVVMCGQTALVLIFMIFVFGVECKGDLLLVIILTILQGLCGM 329
+ Q+ +++ F +++ + G + L +++T + L +
Sbjct: 196 GFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTAL 239
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.142 0.438 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 354 354 0.00079 117 3 11 22 0.43 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 616 (65 KB)
Total size of DFA: 243 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.19u 0.12s 29.31t Elapsed: 00:00:02
Total cpu time: 29.19u 0.12s 29.31t Elapsed: 00:00:02
Start: Thu Aug 15 16:45:26 2013 End: Thu Aug 15 16:45:28 2013