Query psy17042
Match_columns 261
No_of_seqs 192 out of 1936
Neff 7.4
Searched_HMMs 13730
Date Fri Aug 16 20:19:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17042.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17042hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2p8ia1 d.58.55.1 (A:1-115) Pu 29.1 25 0.0018 24.6 3.6 32 1-32 1-32 (115)
2 d1wjwa_ d.129.2.1 (A:) Phospho 8.1 2.3E+02 0.017 18.9 4.4 34 7-40 63-96 (112)
3 d1p5dx4 d.129.2.1 (X:368-463) 7.2 2.9E+02 0.021 17.5 4.5 32 7-38 55-86 (96)
4 d1of8a_ c.1.10.4 (A:) 3-deoxy- 4.2 7.8E+02 0.057 19.6 6.2 33 4-36 37-69 (346)
5 d2r6gf1 e.70.1.1 (F:13-260) Ma 4.0 3E+02 0.022 21.0 3.2 26 64-89 43-68 (248)
6 d2axti1 f.23.37.1 (I:1-35) Pho 3.8 3.4E+02 0.025 14.2 3.5 11 124-134 5-15 (35)
7 d1kyqa2 e.37.1.1 (A:151-273) B 3.6 4.4E+02 0.032 17.6 3.5 34 5-38 3-36 (123)
8 d1n8fa_ c.1.10.4 (A:) 3-deoxy- 3.5 8.9E+02 0.065 19.1 6.0 33 4-36 37-69 (343)
9 d1c7ka_ d.92.1.1 (A:) Zinc pro 3.5 4.8E+02 0.035 17.8 3.6 29 13-44 1-29 (132)
10 d1hnfa2 b.1.1.3 (A:105-182) CD 2.7 3.5E+02 0.025 16.9 1.9 17 5-21 19-35 (78)
No 1
>d2p8ia1 d.58.55.1 (A:1-115) Putative dioxygenase BxeB0224 {Burkholderia xenovorans [TaxId: 36873]}
Probab=29.10 E-value=25 Score=24.58 Aligned_cols=32 Identities=13% Similarity=0.128 Sum_probs=24.5
Q ss_pred CchhhhhcCCCceEEEEEccccchhHHHHHHH
Q psy17042 1 MSKKNTLKTKKEICEVLHQECDQQIGLMLNRD 32 (261)
Q Consensus 1 ~~~~~l~~g~~~~i~v~~d~s~~~~~~~~~~~ 32 (261)
|++|+...=+.=...+|+|+++...+..+++.
T Consensus 1 ~~~~~~~~I~~yhaHVYfd~~~~~~A~~Lr~~ 32 (115)
T d2p8ia1 1 MTFRDTSAIASWHAHVYFDASSRDAAWTLREQ 32 (115)
T ss_dssp CCCCCGGGCCEEEEEEEECGGGHHHHHHHHHH
T ss_pred CCcccCccccceEEEEECCCCCHHHHHHHHHH
Confidence 78888888888899999998766555554443
No 2
>d1wjwa_ d.129.2.1 (A:) Phosphoacetylglucosamine mutase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.07 E-value=2.3e+02 Score=18.93 Aligned_cols=34 Identities=15% Similarity=0.126 Sum_probs=23.6
Q ss_pred hcCCCceEEEEEccccchhHHHHHHHHHHHHHHH
Q psy17042 7 LKTKKEICEVLHQECDQQIGLMLNRDLQLSYRDF 40 (261)
Q Consensus 7 ~~g~~~~i~v~~d~s~~~~~~~~~~~v~~i~~~~ 40 (261)
.+|..+.+.+|..+.+......+.+.+...+.++
T Consensus 63 pSGTEp~iRi~vEa~~~~~~~~i~~~i~~lv~~~ 96 (112)
T d1wjwa_ 63 PSGTEDIVRVYAEANSQESADRLAYEVSLLVFQL 96 (112)
T ss_dssp CSSSSSSEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCceEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 3688899999999887766655555555555443
No 3
>d1p5dx4 d.129.2.1 (X:368-463) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=7.20 E-value=2.9e+02 Score=17.49 Aligned_cols=32 Identities=0% Similarity=-0.075 Sum_probs=21.4
Q ss_pred hcCCCceEEEEEccccchhHHHHHHHHHHHHH
Q psy17042 7 LKTKKEICEVLHQECDQQIGLMLNRDLQLSYR 38 (261)
Q Consensus 7 ~~g~~~~i~v~~d~s~~~~~~~~~~~v~~i~~ 38 (261)
.+|..|.+.+|..+.+......+.+.+.+.+.
T Consensus 55 ~SnTEP~lri~~Ea~s~~~~~~l~~~~~~~l~ 86 (96)
T d1p5dx4 55 ASNTTPVLVLRFEADTEEELERIKTVFRNQLK 86 (96)
T ss_dssp ECSSSSEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred eCCCCCEEEEEEEECCHHHHHHHHHHHHHHHH
Confidence 36788999999998876555554444444443
No 4
>d1of8a_ c.1.10.4 (A:) 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) {Baker's yeast (Saccharomyces cerevisiae), tyrosine-regulated isozyme [TaxId: 4932]}
Probab=4.24 E-value=7.8e+02 Score=19.56 Aligned_cols=33 Identities=9% Similarity=-0.050 Sum_probs=28.8
Q ss_pred hhhhcCCCceEEEEEccccchhHHHHHHHHHHH
Q psy17042 4 KNTLKTKKEICEVLHQECDQQIGLMLNRDLQLS 36 (261)
Q Consensus 4 ~~l~~g~~~~i~v~~d~s~~~~~~~~~~~v~~i 36 (261)
+|+.+|+...+-|+.-.+......++.+|.+..
T Consensus 37 ~~Il~g~D~RlLVIvGPCSIHD~~aa~eYA~rL 69 (346)
T d1of8a_ 37 IDIITGKDDRVLVIVGPCSIHDLEAAQEYALRL 69 (346)
T ss_dssp HHHHTTSCCSEEEEEECSCCCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEEcCCcCCCHHHHHHHHHHH
Confidence 578999999999999999999888888887763
No 5
>d2r6gf1 e.70.1.1 (F:13-260) Maltose transport system permease protein MalF {Escherichia coli [TaxId: 562]}
Probab=4.01 E-value=3e+02 Score=21.02 Aligned_cols=26 Identities=23% Similarity=0.324 Sum_probs=18.2
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHH
Q psy17042 64 PIYGSNDPSFTDFVAPGVILTIVFFL 89 (261)
Q Consensus 64 ~~~~n~~~~y~~~~~p~~i~~~~~~~ 89 (261)
.+|.++..--.-|+.||++.|+.+..
T Consensus 43 ~vy~s~r~~p~kyi~PG~~~l~~Fvi 68 (248)
T d2r6gf1 43 YIFANRKAYAWRYVYPGMAGMGLFVL 68 (248)
T ss_dssp HHHSSSCCTTHHHHHHHHHHHHHHTH
T ss_pred EEEEccCccceehhhhHHHHHHHHHH
Confidence 45566543335699999999988764
No 6
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=3.76 E-value=3.4e+02 Score=14.15 Aligned_cols=11 Identities=18% Similarity=0.081 Sum_probs=6.2
Q ss_pred HHHHHHHHHHH
Q psy17042 124 HVITQFVVMCG 134 (261)
Q Consensus 124 k~l~~~~~~~i 134 (261)
|+..+.++.+.
T Consensus 5 Ki~Vy~vV~fF 15 (35)
T d2axti1 5 KITVYIVVTFF 15 (35)
T ss_dssp HHHHHHHHHHH
T ss_pred EEehhhHHHHH
Confidence 56666655543
No 7
>d1kyqa2 e.37.1.1 (A:151-273) Bifunctional dehydrogenase/ferrochelatase Met8p, dimerisation and C-terminal domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=3.58 E-value=4.4e+02 Score=17.64 Aligned_cols=34 Identities=6% Similarity=0.098 Sum_probs=28.8
Q ss_pred hhhcCCCceEEEEEccccchhHHHHHHHHHHHHH
Q psy17042 5 NTLKTKKEICEVLHQECDQQIGLMLNRDLQLSYR 38 (261)
Q Consensus 5 ~l~~g~~~~i~v~~d~s~~~~~~~~~~~v~~i~~ 38 (261)
++.+|.+-+|.|-.|+..+.-+..+++.+...+-
T Consensus 3 ~~~~GDpLqIaIST~G~sP~LA~~iR~~Ie~~lP 36 (123)
T d1kyqa2 3 NLEIGDRLQILISTNGLSPRFGALVRDEIRNLFT 36 (123)
T ss_dssp EEEETTTEEEEEEESSSCHHHHHHHHHHHHHHHH
T ss_pred ccccCCCeEEEeeCCCccHHHHHHHHHHHHHHCC
Confidence 4667888899999999999999999988877664
No 8
>d1n8fa_ c.1.10.4 (A:) 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) {Escherichia coli, phenylalanine-regulated isozyme [TaxId: 562]}
Probab=3.49 E-value=8.9e+02 Score=19.14 Aligned_cols=33 Identities=12% Similarity=0.047 Sum_probs=29.0
Q ss_pred hhhhcCCCceEEEEEccccchhHHHHHHHHHHH
Q psy17042 4 KNTLKTKKEICEVLHQECDQQIGLMLNRDLQLS 36 (261)
Q Consensus 4 ~~l~~g~~~~i~v~~d~s~~~~~~~~~~~v~~i 36 (261)
+|+.+|+...+-++.-.+......++.+|.+..
T Consensus 37 ~~Il~g~D~RlLVVvGPCSIHD~~aa~eYA~rL 69 (343)
T d1n8fa_ 37 HKILKGNDDRLLVVIGPCSIHDPVAAKEYATRL 69 (343)
T ss_dssp HHHHTTSCCCEEEEEECSSCCCHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEEcCCcCCCHHHHHHHHHHH
Confidence 578999999999999999999888888887764
No 9
>d1c7ka_ d.92.1.1 (A:) Zinc protease {Streptomyces caespitosus [TaxId: 53502]}
Probab=3.48 E-value=4.8e+02 Score=17.83 Aligned_cols=29 Identities=3% Similarity=0.019 Sum_probs=18.4
Q ss_pred eEEEEEccccchhHHHHHHHHHHHHHHHHHHH
Q psy17042 13 ICEVLHQECDQQIGLMLNRDLQLSYRDFAQDL 44 (261)
Q Consensus 13 ~i~v~~d~s~~~~~~~~~~~v~~i~~~~~~~~ 44 (261)
+++++||.++.... +..+.+...-+|..+
T Consensus 1 ~vTl~YdaS~A~~f---~s~ia~~a~iWNssV 29 (132)
T d1c7ka_ 1 TVTVTYDPSNAPSF---QQEIANAAQIWNSSV 29 (132)
T ss_dssp CEEEEEEEEECGGG---HHHHHHHHHHHHHHC
T ss_pred CEEEEEcCCCCchH---HHHHHHHHHHhhcCC
Confidence 47899999866543 445555555666543
No 10
>d1hnfa2 b.1.1.3 (A:105-182) CD2, second domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.70 E-value=3.5e+02 Score=16.93 Aligned_cols=17 Identities=0% Similarity=0.012 Sum_probs=0.0
Q ss_pred hhhcCCCceEEEEEccc
Q psy17042 5 NTLKTKKEICEVLHQEC 21 (261)
Q Consensus 5 ~l~~g~~~~i~v~~d~s 21 (261)
....|.++++.+|.|++
T Consensus 19 ev~nGTd~~L~Ly~N~t 35 (78)
T d1hnfa2 19 EVMNGTDPELNLYQDGK 35 (78)
T ss_dssp ECSSCSSCEEEEEESSC
T ss_pred EeccCCCcEEEEEECCE
Done!