Your job contains 1 sequence.
>psy17042
MSKKNTLKTKKEICEVLHQECDQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQ
FKEPIYGSNDPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEI
LFSHVITQFVVMCGQTALVLIFMIFVFGVECKGDLLLVIILTILQGLCGMCFVECKGDLL
LVIILTILQGLCGMCFGFVISAICELERNAIQLALGSFYPTLLLSGCFKNMVYPVNLAIC
ELERNAIQLALGSFYPTLLLS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17042
(261 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039594 - symbol:CG9990 species:7227 "Drosophila m... 623 3.3e-71 2
FB|FBgn0053970 - symbol:CG33970 species:7227 "Drosophila ... 430 1.2e-39 1
ZFIN|ZDB-GENE-050517-42 - symbol:abch1 "ATP-binding casse... 335 4.3e-33 2
FB|FBgn0031734 - symbol:CG11147 species:7227 "Drosophila ... 318 1.8e-30 2
DICTYBASE|DDB_G0267430 - symbol:abcG20 "ABC transporter G... 196 1.7e-14 1
DICTYBASE|DDB_G0269026 - symbol:abcG23 "ABC transporter G... 179 2.0e-11 1
TIGR_CMR|DET_0814 - symbol:DET_0814 "ABC transporter, per... 144 3.6e-08 1
TIGR_CMR|BA_2542 - symbol:BA_2542 "ABC transporter, perme... 117 2.0e-06 2
TIGR_CMR|DET_0795 - symbol:DET_0795 "ABC transporter, per... 121 5.6e-05 1
TIGR_CMR|DET_0519 - symbol:DET_0519 "ABC transporter, per... 116 0.00024 1
>FB|FBgn0039594 [details] [associations]
symbol:CG9990 species:7227 "Drosophila melanogaster"
[GO:0043190 "ATP-binding cassette (ABC) transporter complex"
evidence=ISS] [GO:0005215 "transporter activity" evidence=ISS]
[GO:0042626 "ATPase activity, coupled to transmembrane movement of
substances" evidence=ISS] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR000412 InterPro:IPR003439
InterPro:IPR003593 InterPro:IPR013525 InterPro:IPR017871
Pfam:PF00005 Pfam:PF01061 PROSITE:PS00211 PROSITE:PS50893
PROSITE:PS51012 SMART:SM00382 EMBL:AE014297 GO:GO:0005886
GO:GO:0005524 GO:GO:0006200 GO:GO:0042626
GeneTree:ENSGT00700000104032 OMA:FAVALMH FlyBase:FBgn0039594
UniGene:Dm.16358 GeneID:43391 KEGG:dme:Dmel_CG9990 GenomeRNAi:43391
NextBio:833684 RefSeq:NP_651628.1 ProteinModelPortal:Q9VAU1
SMR:Q9VAU1 PRIDE:Q9VAU1 EnsemblMetazoa:FBtr0085308 UCSC:CG9990-RA
InParanoid:Q9VAU1 PhylomeDB:Q9VAU1 ArrayExpress:Q9VAU1 Bgee:Q9VAU1
Uniprot:Q9VAU1
Length = 808
Score = 623 (224.4 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 118/151 (78%), Positives = 134/151 (88%)
Query: 22 DQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEPIYGSNDPSFTDFVAPGV 81
+QQIG+MLNRD+QL++RDFA LL C NPK+ D+PIQF++PIYG+ +PSFTDFVAPGV
Sbjct: 558 NQQIGVMLNRDIQLAFRDFAMGLLGQCGSNPKLGDVPIQFRDPIYGTMNPSFTDFVAPGV 617
Query: 82 ILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQFVVMCGQTALVLI 141
ILTIVFFLAVALTSSALIIER EGLLDRSWVAGV+P EILFSHVITQFVVMCGQT LVLI
Sbjct: 618 ILTIVFFLAVALTSSALIIERTEGLLDRSWVAGVSPFEILFSHVITQFVVMCGQTTLVLI 677
Query: 142 FMIFVFGVECKGDLLLVIILTILQGLCGMCF 172
FM+ VFGV GDL VI+LT+LQG+CGMCF
Sbjct: 678 FMLVVFGVTNNGDLFWVIVLTLLQGMCGMCF 708
Score = 240 (89.5 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 52/106 (49%), Positives = 73/106 (68%)
Query: 132 MCGQTALVLIF--MIFVFGVECKGDLLLVIILTILQGLCGMCFVECKGDLLLVIILTILQ 189
+ G + ++F +I F V C L++I + ++ G+ GDL VI+LT+LQ
Sbjct: 648 VAGVSPFEILFSHVITQFVVMCGQTTLVLIFMLVVFGVTN------NGDLFWVIVLTLLQ 701
Query: 190 GLCGMCFGFVISAICELERNAIQLALGSFYPTLLLSGCFKNMVYPV 235
G+CGMCFGF+IS++CELERNAIQLALGSFYPTLLLSG +++P+
Sbjct: 702 GMCGMCFGFLISSVCELERNAIQLALGSFYPTLLLSG----VIWPI 743
Score = 116 (45.9 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 221 TLLLSGCFKNMVYPVNLAICELERNAIQLALGSFYPTLLLS 261
TLL C + ++ ++CELERNAIQLALGSFYPTLLLS
Sbjct: 698 TLLQGMCGMCFGFLIS-SVCELERNAIQLALGSFYPTLLLS 737
>FB|FBgn0053970 [details] [associations]
symbol:CG33970 species:7227 "Drosophila melanogaster"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006810
"transport" evidence=ISS] [GO:0042626 "ATPase activity, coupled to
transmembrane movement of substances" evidence=ISS] [GO:0043190
"ATP-binding cassette (ABC) transporter complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000412
InterPro:IPR003439 InterPro:IPR003593 InterPro:IPR017871
Pfam:PF00005 PROSITE:PS00211 PROSITE:PS50893 PROSITE:PS51012
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0016020
GO:GO:0006200 GO:GO:0042626 eggNOG:COG1131
GeneTree:ENSGT00700000104032 EMBL:BT003531 RefSeq:NP_001034071.1
UniGene:Dm.1342 SMR:Q86P18 EnsemblMetazoa:FBtr0100012 GeneID:43186
KEGG:dme:Dmel_CG33970 UCSC:CG33970-RA FlyBase:FBgn0053970
InParanoid:Q86P18 OMA:SILQRGW OrthoDB:EOG4M0CGN ChiTaRS:CG33970
GenomeRNAi:43186 NextBio:832620 Uniprot:Q86P18
Length = 777
Score = 430 (156.4 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 84/160 (52%), Positives = 112/160 (70%)
Query: 22 DQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEPIYGSNDPSFTDFVAPGV 81
+QQI +L RDLQ ++ +F D+LS CD NPK+ +P+ F+ P+YG +P+FTDF APGV
Sbjct: 527 NQQISQLLYRDLQYTFFNFVGDMLSDCDVNPKLGRVPVDFQHPVYGYRNPNFTDFAAPGV 586
Query: 82 ILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQFVVMCGQTALVLI 141
ILTI+FFLAVA+TS A++I+R EG+L+R VAG+T EIL S V+TQF VM QT VLI
Sbjct: 587 ILTIIFFLAVAVTSGAMLIDRNEGMLERCLVAGITGPEILLSQVVTQFTVMLSQTTFVLI 646
Query: 142 FMIFVFGVECKGDLLLVIILTILQGLCGMCF---VECKGD 178
+ F + G++ LV+ L IL GLCGM F + C D
Sbjct: 647 VSFYFFELTLVGNIWLVVALCILNGLCGMSFGFVISCAVD 686
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 177 GDLLLVIILTILQGLCGMCFGFVISAICELERNAIQLALGSFYPTLLLSGCFKNMVYPV 235
G++ LV+ L IL GLCGM FGFVIS + ER A +A+GSF P ++L G +++P+
Sbjct: 658 GNIWLVVALCILNGLCGMSFGFVISCAVDTERTATYVAMGSFLPIVMLCG----IIWPI 712
>ZFIN|ZDB-GENE-050517-42 [details] [associations]
symbol:abch1 "ATP-binding cassette, sub-family H,
member 1" species:7955 "Danio rerio" [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0042626
"ATPase activity, coupled to transmembrane movement of substances"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
InterPro:IPR000412 InterPro:IPR003439 InterPro:IPR003593
InterPro:IPR013526 InterPro:IPR017871 Pfam:PF00005 PRINTS:PR00164
PROSITE:PS00211 PROSITE:PS50893 PROSITE:PS51012 SMART:SM00382
ZFIN:ZDB-GENE-050517-42 GO:GO:0005524 GO:GO:0016020 GO:GO:0006200
GO:GO:0042626 GeneTree:ENSGT00700000104032 EMBL:CR352220
IPI:IPI00502581 Ensembl:ENSDART00000135086 Uniprot:F1QZ58
Length = 705
Score = 335 (123.0 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 67/151 (44%), Positives = 99/151 (65%)
Query: 22 DQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEPIYGSNDPSFTDFVAPGV 81
++QI LML + L ++ F + L + + +PI+F+EPIYGS + FT FV PG
Sbjct: 459 NRQIALMLQKKLHQAFEAFMEKRLGSMSY---MVAVPIKFEEPIYGSKNTDFTTFVTPGA 515
Query: 82 ILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQFVVMCGQTALVLI 141
+L+I F+LAV LT+ + ++ER EGLLDR WVAGV+ LE + +H+ +Q V+ Q L+LI
Sbjct: 516 VLSITFYLAVGLTALSFVLERKEGLLDRCWVAGVSSLETMLAHLFSQLFVISVQIILLLI 575
Query: 142 FMIFVFGVECKGDLLLVIILTILQGLCGMCF 172
F + VF + +G L LVI L +LQG+ G+ F
Sbjct: 576 FTLLVFNIPNEGSLALVISLIVLQGVTGISF 606
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 40/102 (39%), Positives = 63/102 (61%)
Query: 135 QTALVLIF-MIFVFGVECKGDLLLVIILTILQGLCGMCFVECKGDLLLVIILTILQGLCG 193
+T L +F +FV V+ ++L++I T+L + + +G L LVI L +LQG+ G
Sbjct: 553 ETMLAHLFSQLFVISVQ----IILLLIFTLL-----VFNIPNEGSLALVISLIVLQGVTG 603
Query: 194 MCFGFVISAICELERNAIQLALGSFYPTLLLSGCFKNMVYPV 235
+ FG VIS+ + E++A Q ALG FYP L+LSG +++PV
Sbjct: 604 ISFGLVISSAIDDEQSANQAALGVFYPNLILSG----VIWPV 641
Score = 58 (25.5 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 243 ERNAIQLALGSFYPTLLLS 261
E++A Q ALG FYP L+LS
Sbjct: 617 EQSANQAALGVFYPNLILS 635
>FB|FBgn0031734 [details] [associations]
symbol:CG11147 species:7227 "Drosophila melanogaster"
[GO:0005215 "transporter activity" evidence=ISS] [GO:0043190
"ATP-binding cassette (ABC) transporter complex" evidence=ISS]
[GO:0042626 "ATPase activity, coupled to transmembrane movement of
substances" evidence=ISS] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000412 InterPro:IPR003439
InterPro:IPR003593 InterPro:IPR017871 Pfam:PF00005 PROSITE:PS00211
PROSITE:PS50893 PROSITE:PS51012 SMART:SM00382 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0016020 GO:GO:0006200
GO:GO:0042626 eggNOG:COG1131 GeneTree:ENSGT00700000104032
EMBL:BT010210 RefSeq:NP_608954.1 RefSeq:NP_723114.1
UniGene:Dm.22471 SMR:Q9VMM9 EnsemblMetazoa:FBtr0079165
EnsemblMetazoa:FBtr0079166 GeneID:33803 KEGG:dme:Dmel_CG11147
UCSC:CG11147-RA FlyBase:FBgn0031734 InParanoid:Q9VMM9 OMA:MVFFLAT
OrthoDB:EOG4KD522 GenomeRNAi:33803 NextBio:785336 Uniprot:Q9VMM9
Length = 711
Score = 318 (117.0 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
Identities = 59/151 (39%), Positives = 97/151 (64%)
Query: 22 DQQIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEPIYGSNDPSFTDFVAPGV 81
DQQ+ + R L+ + F + ++ C+ + I D+P+QF+EPI+GS D F + APGV
Sbjct: 462 DQQVAYFMQRKLRDKFSTFMRSVVKDCNVSTAIVDLPVQFQEPIFGSTDIEFQQYCAPGV 521
Query: 82 ILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQFVVMCGQTALVLI 141
++T+VFFLA +T++ I ERM+G+ DR+ +AGV+ E+L++H++TQ ++M Q+ V++
Sbjct: 522 VMTMVFFLATLMTAAVFISERMDGIWDRTLLAGVSATEMLWAHLLTQLIIMALQSFEVIM 581
Query: 142 FMIFVFGVECKGDLLLVIILTILQGLCGMCF 172
++ VF GD +I L L CGM F
Sbjct: 582 YIGLVFDTYNNGDTTTLIGLLTLTAFCGMLF 612
Score = 51 (23.0 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 222 LLLSGCFKNMVYPVNLAI-CELERNAIQLALGSFYPTLLL 260
LL F M++ + +++ C+ A +A G+FYP ++L
Sbjct: 601 LLTLTAFCGMLFGLFISVFCKSHTEANFVATGAFYPMIIL 640
>DICTYBASE|DDB_G0267430 [details] [associations]
symbol:abcG20 "ABC transporter G family protein"
species:44689 "Dictyostelium discoideum" [GO:0043190 "ATP-binding
cassette (ABC) transporter complex" evidence=ISS] [GO:0042626
"ATPase activity, coupled to transmembrane movement of substances"
evidence=IEA;ISS] [GO:0006810 "transport" evidence=IEA;ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000412
InterPro:IPR003439 InterPro:IPR003593 InterPro:IPR013525
InterPro:IPR013526 InterPro:IPR017871 Pfam:PF00005 Pfam:PF01061
PRINTS:PR00164 PROSITE:PS00211 PROSITE:PS50893 PROSITE:PS51012
SMART:SM00382 dictyBase:DDB_G0267430 GO:GO:0016021 GO:GO:0005524
GenomeReviews:CM000150_GR EMBL:AAFI02000003 GO:GO:0042626
eggNOG:COG1131 GO:GO:0043190 EMBL:AF482397 RefSeq:XP_647230.1
ProteinModelPortal:Q8T674 PRIDE:Q8T674 EnsemblProtists:DDB0191238
GeneID:8616035 KEGG:ddi:DDB_G0267430 OMA:RHRTALY
ProtClustDB:CLSZ2431495 Uniprot:Q8T674
Length = 730
Score = 196 (74.1 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 46/148 (31%), Positives = 81/148 (54%)
Query: 24 QIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEP-IYGSNDPSFTDFVAPGVI 82
QI L++ + L LS+ A+ Q I PI+ P +YG+ + F DF+APG++
Sbjct: 477 QITLIVEQQLALSFETLAK-------QQANITMNPIKTVTPTVYGNPNSKFIDFLAPGMV 529
Query: 83 LTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQFVVMCGQTALVLIF 142
I F A+++TS + + E+++G LDR + GV I+F H + ++ Q ++L+
Sbjct: 530 CLISFAHAISITSVSFVKEKVDGSLDRLFAYGVRTSSIVFGHFLGHLPLLLVQITVLLLI 589
Query: 143 MIFVFGVECKGDLLLVIILTILQGLCGM 170
I+ F V +G++ LV ++T+ GM
Sbjct: 590 AIYGFNVPIEGNIALVFLMTVSLAFVGM 617
Score = 135 (52.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 146 VFGVECKGDL-LLVIILTILQGLCGMCF-VECKGDLLLVIILTILQGLCGMCFGFVISAI 203
VFG G L LL++ +T+L + F V +G++ LV ++T+ GM G VISA+
Sbjct: 568 VFG-HFLGHLPLLLVQITVLLLIAIYGFNVPIEGNIALVFLMTVSLAFVGMSLGLVISAV 626
Query: 204 CELERNAIQLALGSFYPTLLLSG 226
+E AIQL+LG ++PTL+ SG
Sbjct: 627 SRVETEAIQLSLGVYFPTLICSG 649
>DICTYBASE|DDB_G0269026 [details] [associations]
symbol:abcG23 "ABC transporter G family protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR003439
InterPro:IPR003593 InterPro:IPR017871 Pfam:PF00005 PROSITE:PS00211
PROSITE:PS50893 PROSITE:PS51012 SMART:SM00382
dictyBase:DDB_G0269026 GO:GO:0016021 GO:GO:0005524
GenomeReviews:CM000150_GR GO:GO:0006810 GO:GO:0006200
EMBL:AAFI02000004 eggNOG:COG1131 GO:GO:0016887
ProtClustDB:CLSZ2431495 RefSeq:XP_647042.2
ProteinModelPortal:Q55EH8 STRING:Q55EH8 EnsemblProtists:DDB0304677
GeneID:8616737 KEGG:ddi:DDB_G0269026 InParanoid:Q55EH8 OMA:FAVALMH
Uniprot:Q55EH8
Length = 701
Score = 179 (68.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 46/181 (25%), Positives = 88/181 (48%)
Query: 24 QIGLMLNRDLQLSYRDFAQDLLSTCDQNPKIADIPIQFKEPIYGSNDPSFTDFVAPGVIL 83
Q+ LM++ Q ++ A D K+ +P F +YG + +F F+AP +I
Sbjct: 450 QMNLMVDVQFQKAFNKIAND------SGIKL--LPTNF-HAVYGDQNANFNWFLAPAMIC 500
Query: 84 TIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQFVVMCGQTALVLIFM 143
I + + S + E+ +G DR + GV+P+ + H++ ++ Q ++ L+
Sbjct: 501 IITYVHCMNFLSITFVREKNDGTRDRILLYGVSPVSNVLGHILAHIPILLVQFSIQLLIA 560
Query: 144 IFVFGVECKGDLLLVIILTILQGLCGMCFVECKGDLLLVIILTILQGLCGMCFGFVISAI 203
+F FGV KG+++L+ + IL GMC +G L+ +I + + +C I ++
Sbjct: 561 VFAFGVPIKGNIVLIYLFFILINTVGMC----QGILISLISKAEVDAV-QLCLAIFICSL 615
Query: 204 C 204
C
Sbjct: 616 C 616
>TIGR_CMR|DET_0814 [details] [associations]
symbol:DET_0814 "ABC transporter, permease protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006810
"transport" evidence=ISS] [GO:0042626 "ATPase activity, coupled to
transmembrane movement of substances" evidence=ISS]
InterPro:IPR000412 InterPro:IPR013525 Pfam:PF01061 PROSITE:PS51012
GO:GO:0005524 GO:GO:0016020 GO:GO:0042626 eggNOG:COG0842
EMBL:CP000027 GenomeReviews:CP000027_GR KO:K09686
HOGENOM:HOG000021525 OMA:DYIAPAM RefSeq:YP_181542.1 STRING:Q3Z8A7
TCDB:9.B.74.2.2 GeneID:3229920 KEGG:det:DET0814 PATRIC:21608687
ProtClustDB:CLSK837300 BioCyc:DETH243164:GJNF-815-MONOMER
Uniprot:Q3Z8A7
Length = 241
Score = 144 (55.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 27/95 (28%), Positives = 56/95 (58%)
Query: 70 DPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFSHVITQF 129
D + D++AP ++ T+ F + LT + + E +G ++R A V+ L+I+ +++ F
Sbjct: 42 DATVLDYIAPAMLATLALFFSFLLTGISFLRETSQGTMERLMAAPVSRLDIVAGYLLGFF 101
Query: 130 VVMCGQTALVLIFMIFVFGVECKGDLLLVIILTIL 164
V QT ++++F I+V GV +G+L +++ +L
Sbjct: 102 VFALLQTLIIVLFTIYVLGVNFQGELWQILLFQVL 136
>TIGR_CMR|BA_2542 [details] [associations]
symbol:BA_2542 "ABC transporter, permease protein,
putative" species:198094 "Bacillus anthracis str. Ames" [GO:0006810
"transport" evidence=ISS] InterPro:IPR000412 PROSITE:PS51012
GO:GO:0005524 GO:GO:0016020 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0042626 KO:K01992
RefSeq:NP_844910.1 RefSeq:YP_019181.1 RefSeq:YP_028626.1
DNASU:1085735 EnsemblBacteria:EBBACT00000010181
EnsemblBacteria:EBBACT00000016190 EnsemblBacteria:EBBACT00000024202
GeneID:1085735 GeneID:2816120 GeneID:2851103 KEGG:ban:BA_2542
KEGG:bar:GBAA_2542 KEGG:bat:BAS2365 HOGENOM:HOG000271973
OMA:ASIYEYS ProtClustDB:CLSK916683
BioCyc:BANT260799:GJAJ-2431-MONOMER
BioCyc:BANT261594:GJ7F-2519-MONOMER Uniprot:Q81Q91
Length = 339
Score = 117 (46.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 38/167 (22%), Positives = 80/167 (47%)
Query: 9 TKKEICEVLHQECDQQIGLMLNR-DLQLSYRDFAQD--LLSTCDQNPKIADIPIQFKEPI 65
T+K + E+ +Q+ D I L + ++ L D +++ +L ++ + DI I E
Sbjct: 73 TEKAMSELENQKVDAVIRLENGKMNIVLEGSDSSKNRAVLQILQKSTEKNDISIMKPEVN 132
Query: 66 Y--GSNDPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLDRSWVAGVTPLEILFS 123
Y GS D + D + P +I FF L+ + + ER+ G L+R + EI+
Sbjct: 133 YLHGSKDFTMFDGLGPVLIGFFTFFFVFILSGVSFVRERLSGALERLLSTPIKRWEIVVG 192
Query: 124 HVITQFVVMCGQTALVLIFMIFVFGVECKGDLLLVIILTILQGLCGM 170
++I + Q+ +++ F +++ + G + L +++T + L +
Sbjct: 193 YIIGFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTAL 239
Score = 55 (24.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 177 GDLLLVIILTILQGLCGMCFGFVISAICELERNAIQLALGSFYPTLLLSGCF 228
G + L +++T + L + G +SA E IQ P + SG F
Sbjct: 222 GSIWLTLLITCMLSLTALTLGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLF 273
>TIGR_CMR|DET_0795 [details] [associations]
symbol:DET_0795 "ABC transporter, permease protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006810
"transport" evidence=ISS] [GO:0042626 "ATPase activity, coupled to
transmembrane movement of substances" evidence=ISS]
InterPro:IPR000412 PROSITE:PS51012 GO:GO:0005524 GO:GO:0016020
GO:GO:0042626 eggNOG:COG0842 EMBL:CP000027
GenomeReviews:CP000027_GR KO:K01992 RefSeq:YP_181527.1
ProteinModelPortal:Q3Z8C2 STRING:Q3Z8C2 GeneID:3229854
KEGG:det:DET0795 PATRIC:21608651 HOGENOM:HOG000275362 OMA:RESTIAP
ProtClustDB:CLSK935601 BioCyc:DETH243164:GJNF-796-MONOMER
Uniprot:Q3Z8C2
Length = 339
Score = 121 (47.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 51 NPKIADIPIQFK--EPIYGSNDPSFTDFVAPGVILTIVFFLAVALTSSALIIERMEGLLD 108
N +I P+ F+ E + D S F PGV+ + FL + ++ LI +R + +L
Sbjct: 121 NREITQTPVLFEISEETIQTKDMSMMSFFIPGVLAMSIMFLGI-YSAMPLIQQREKKILK 179
Query: 109 RSWVAGVTPLEILFSHVITQFVVMCGQTALVLIFMIFVFGVECKGDLLLVIILTIL 164
R + ++ I+FS V+ + + QT ++++ +FGVE G+ L++ L +L
Sbjct: 180 RLGASPISRSTIIFSQVVLRLGLAVLQTVIIIVIGQLMFGVEILGNWWLLLGLVML 235
>TIGR_CMR|DET_0519 [details] [associations]
symbol:DET_0519 "ABC transporter, permease protein,
putative" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0006810 "transport" evidence=ISS] [GO:0042626 "ATPase activity,
coupled to transmembrane movement of substances" evidence=ISS]
InterPro:IPR000412 PROSITE:PS51012 GO:GO:0005524 GO:GO:0016020
GO:GO:0042626 eggNOG:COG0842 EMBL:CP000027
GenomeReviews:CP000027_GR KO:K09686 RefSeq:YP_181263.1
STRING:Q3Z936 GeneID:3230180 KEGG:det:DET0519 PATRIC:21608105
HOGENOM:HOG000275419 OMA:ITNIDFI ProtClustDB:CLSK837449
BioCyc:DETH243164:GJNF-519-MONOMER Uniprot:Q3Z936
Length = 365
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 35/141 (24%), Positives = 73/141 (51%)
Query: 32 DLQLSYRDFAQDLLSTCDQNPKIADIPIQFK-EPIYGSNDPSFTDFVAPGVILTIVFFLA 90
D+Q + +Q L + C KI +IP+ +P+ N + DF++PG+I VF L
Sbjct: 129 DIQAAGEILSQ-LNAVCRAFAKI-EIPLSINAQPVNIENKITNIDFISPGII---VFGLL 183
Query: 91 VALTSSALII--ERMEGLLDRSWVAGVTPLEILFSHVITQFVVMCGQTALVLIFMI--FV 146
+ + +SA I+ ++ +G + R P++ + + ++ + Q ++ FM+ ++
Sbjct: 184 ILIPTSARIMVRDKEKGFMSRMLTTPSRPVDFILGYSLSMTFICIIQ---IIFFMLLGYL 240
Query: 147 FGVECKGDLLLVIILTILQGL 167
FG++ G++ L ++ L GL
Sbjct: 241 FGMDITGNIALAFLIFFLTGL 261
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.330 0.145 0.438 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 261 261 0.00090 114 3 11 22 0.49 32
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 596 (63 KB)
Total size of DFA: 179 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.33u 0.10s 22.43t Elapsed: 00:00:02
Total cpu time: 22.33u 0.10s 22.43t Elapsed: 00:00:02
Start: Thu Aug 15 16:48:52 2013 End: Thu Aug 15 16:48:54 2013