BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy1705
         (309 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|189233776|ref|XP_001814509.1| PREDICTED: similar to CG5367 CG5367-PA [Tribolium castaneum]
 gi|270015148|gb|EFA11596.1| cathepsin K precursor [Tribolium castaneum]
          Length = 330

 Score =  363 bits (933), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 167/303 (55%), Positives = 223/303 (73%), Gaps = 11/303 (3%)

Query: 15  KKYKKDYRKKA---TDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           +K+K+ Y K      D+ +KL WQSN +KI  HN+EA +GLH Y ++EN LSD+  + Y+
Sbjct: 31  EKFKQSYNKTYYGYLDTSRKLAWQSNLEKIKKHNEEADKGLHSYYIKENDLSDMSTQSYL 90

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVL-----IPDHLDWREKGFITPDWNQEDCGACYAFS 126
           ++M +LT S  R+     PE    +      IP+ ++W EKGF TP +NQ+DCG+CYAFS
Sbjct: 91  QKMVKLTKSTHRKV---DPEVVGDLFELLHHIPEEVNWVEKGFETPSYNQKDCGSCYAFS 147

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
           IAS +Q QIFK T ++  LS QQ+VDCS+  GN GC GGSLRNTL Y++ AGGLM   DY
Sbjct: 148 IASVLQAQIFKQTEKLVPLSEQQIVDCSVSMGNYGCGGGSLRNTLRYLEKAGGLMTYSDY 207

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY  +Q  C+F +   +V++++W+VLP +DE AL++ +A +GP+A SINASPHTFQLY S
Sbjct: 208 PYLARQQRCRFDKHRAIVNLTTWAVLPARDERALELAVAKIGPVAASINASPHTFQLYHS 267

Query: 247 GIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306
           G+YDD AC+S++VNHAML+VGYT+N+WILKNWW  HWG+ GYM L+RG NRCGIANYA Y
Sbjct: 268 GVYDDVACSSNHVNHAMLIVGYTKNAWILKNWWGKHWGEKGYMRLRRGKNRCGIANYAAY 327

Query: 307 ALI 309
           AL+
Sbjct: 328 ALV 330


>gi|383852029|ref|XP_003701533.1| PREDICTED: cathepsin J-like [Megachile rotundata]
          Length = 341

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 158/299 (52%), Positives = 210/299 (70%), Gaps = 4/299 (1%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + +Y K Y   + ++ ++  W+ N   I+ HN  A  G H YTLR+NH++DL  R Y++E
Sbjct: 44  KARYNKSY-SGSEETDRRASWEENLVTIYKHNMMAAAGHHSYTLRDNHIADLGTRQYVRE 102

Query: 74  MTRLTHSRIRRTLVRS---PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           M +L  SR RR    S      ++  L+P  +DWRE GF+TP  NQ +CG+CYA+SIA +
Sbjct: 103 MVKLIPSRKRRVSTDSVVGAALSDPGLVPSRIDWRELGFVTPAENQRNCGSCYAYSIAGS 162

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           IQGQIFK T  +  LS QQ++DCS  +GNLGC+GGSLRNTL Y++ A GLM +  YPYK 
Sbjct: 163 IQGQIFKRTGALIPLSEQQLIDCSTSTGNLGCSGGSLRNTLRYLEKAKGLMSQAYYPYKA 222

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           KQ  C+F+    VV+++SW+VLP +DE AL+  +AT+GPIA S+NASP TFQLY +G+YD
Sbjct: 223 KQGRCRFQEDLSVVNVTSWAVLPARDEKALEAAVATIGPIAASVNASPRTFQLYHNGVYD 282

Query: 251 DEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           DE C+SD VNHA+L+VGYT   WILKNWW   WG+NGYM L +  NRCG+ANYA YA +
Sbjct: 283 DELCSSDMVNHAVLIVGYTPTEWILKNWWGDGWGENGYMRLAKMKNRCGVANYAAYAKV 341


>gi|380026639|ref|XP_003697053.1| PREDICTED: cathepsin J-like [Apis florea]
          Length = 346

 Score =  342 bits (878), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 166/300 (55%), Positives = 207/300 (69%), Gaps = 7/300 (2%)

Query: 17  YKKDYRKKAT---DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           YK  Y K  +   +S +++ W+ N   I+ HN  A  G H YTL++NH++DL  R YI++
Sbjct: 47  YKARYNKSYSGDLESSRRMTWEENLITIYKHNMMAAAGHHSYTLKDNHIADLGTRQYIRD 106

Query: 74  MTRLTHSRIRR----TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           M +L  SR RR    TLV    S+    IP  LDWRE GF T   NQ DCG+CYA+SIA 
Sbjct: 107 MVKLIPSRKRRISKETLVGVSLSDHQRDIPRELDWRESGFKTRAENQRDCGSCYAYSIAG 166

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           +I+GQIFK T  +  LS QQ+VDCS  +GNLGC+GGSLRNTL Y++ A GLM ++ YPYK
Sbjct: 167 SIEGQIFKKTGMLLPLSEQQLVDCSTSTGNLGCSGGSLRNTLRYLEKAKGLMAKKYYPYK 226

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            KQ  C+F     VV+I+SW+VLP +DE  L+  +AT+GPIA SINASP TFQLY  GIY
Sbjct: 227 AKQGPCRFNEDLSVVNITSWAVLPARDEKVLEAAVATIGPIAASINASPKTFQLYHKGIY 286

Query: 250 DDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           DDE C+SD VNHAML+VGYT   WILKNWW   WG+NGYM L +  NRCG+ANYA YA +
Sbjct: 287 DDEVCSSDMVNHAMLIVGYTPTEWILKNWWGDGWGENGYMRLAKNKNRCGVANYAAYAKV 346


>gi|340710175|ref|XP_003393670.1| PREDICTED: cathepsin K-like [Bombus terrestris]
          Length = 343

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 164/305 (53%), Positives = 209/305 (68%), Gaps = 16/305 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + +Y K Y     ++ +++ W+ N   I+ HN  A  G H YTLR+NH++DL  R YI+E
Sbjct: 46  KTRYNKSYSGN-LETNRRIAWEENLITIYKHNMMAAAGHHSYTLRDNHIADLGTRQYIRE 104

Query: 74  MTRLTHSRIRRTLVRSPESNESVL---------IPDHLDWREKGFITPDWNQEDCGACYA 124
           M +L  SR RR       SNE ++         IP  LDWRE GF TP  NQ DCG+CYA
Sbjct: 105 MVKLIPSRKRRV------SNEPIVGAVLHDPRRIPPQLDWREMGFKTPPENQRDCGSCYA 158

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           +SIA++IQGQIFK T  +  LS QQ++DCS  +GNLGC+GGSLRNTL Y++ A GLM + 
Sbjct: 159 YSIATSIQGQIFKKTGMLIPLSEQQLIDCSTSTGNLGCSGGSLRNTLRYLEKAKGLMPQS 218

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            Y Y  KQ  C+F     VV+I+SW+VLP +DE AL+  +AT+GPIA SINASP TFQLY
Sbjct: 219 RYSYTAKQGPCRFVEDLSVVNITSWAVLPARDEKALEAAVATIGPIAASINASPKTFQLY 278

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYA 304
            +G+YDDE C+SD VNHAM++VGYT   WILKNWW + WG+NGYM L +  NRCGIANYA
Sbjct: 279 HTGVYDDEVCSSDTVNHAMVIVGYTPTEWILKNWWGNGWGENGYMRLAKNKNRCGIANYA 338

Query: 305 VYALI 309
            YA +
Sbjct: 339 AYAKV 343


>gi|328789446|ref|XP_394277.3| PREDICTED: cathepsin J-like [Apis mellifera]
          Length = 344

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 168/300 (56%), Positives = 207/300 (69%), Gaps = 8/300 (2%)

Query: 17  YKKDYRKKAT---DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           YK  Y K  +   +S ++  W+ N   I+ HN  A  G H YTL++NH++DL  R YI+E
Sbjct: 46  YKARYNKSYSGDLESNRRTTWEENLITIYKHNMMAAAGHHSYTLKDNHIADLGTRQYIRE 105

Query: 74  MTRLTHSRIRR----TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           M +L  SR RR    TLV    S+    IP  LDWRE GF T   NQ DCG+CYA+SIA 
Sbjct: 106 MVKLIPSRKRRISKDTLVGVSLSDHQ-RIPRELDWREVGFKTQPENQRDCGSCYAYSIAG 164

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           +I+GQIFK T  +  LS QQ+VDCS  +GNLGC+GGSLRNTL Y++ A GLM ++ YPYK
Sbjct: 165 SIEGQIFKKTGMLLPLSEQQLVDCSTSTGNLGCSGGSLRNTLRYLEKAKGLMAKKYYPYK 224

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            KQ  C+FK    VV+I+SW+VLP +DE  L+  +AT+GPIA SINASP TFQLY  G+Y
Sbjct: 225 AKQGQCRFKEDLSVVNITSWAVLPARDEKVLEAAVATIGPIAASINASPKTFQLYHKGVY 284

Query: 250 DDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           DDE C+SD VNHAML+VGYT   WILKNWW   WG+NGYM L +  NRCGIANYA YA +
Sbjct: 285 DDEVCSSDMVNHAMLIVGYTPTEWILKNWWGDGWGENGYMRLAKNKNRCGIANYAAYAKV 344


>gi|350413611|ref|XP_003490051.1| PREDICTED: cathepsin J-like [Bombus impatiens]
          Length = 343

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 162/305 (53%), Positives = 208/305 (68%), Gaps = 18/305 (5%)

Query: 17  YKKDYRKKAT---DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           YK  Y K  +   ++ +++ W+ N   I+ HN  A  G H YTLR+NH++DL  R YI+E
Sbjct: 45  YKTRYNKSYSGNLETNRRIAWEENLITIYKHNMMAAAGHHSYTLRDNHIADLGTRQYIRE 104

Query: 74  MTRLTHSRIRRTLVRSPESNESVL---------IPDHLDWREKGFITPDWNQEDCGACYA 124
           M +L  SR RR       SNE ++         IP  LDWRE GF TP  NQ DCG+CYA
Sbjct: 105 MVKLIPSRKRRV------SNEPIVGAVLHDPRRIPPQLDWREMGFKTPPENQRDCGSCYA 158

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           +S+A++IQGQIFK T  +  LS QQ++DCS  +GNLGC+GGSLRNTL Y++ A GLM + 
Sbjct: 159 YSVATSIQGQIFKKTGMLIPLSEQQLIDCSTSTGNLGCSGGSLRNTLRYLEKAKGLMPQS 218

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            Y Y  KQ  C+F     VV+I+SW+VLP +DE AL+  +A +GPIA S+NASP TFQLY
Sbjct: 219 RYSYTAKQGPCRFVEDLSVVNITSWAVLPARDEKALEAAVAIIGPIAASVNASPKTFQLY 278

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYA 304
            +G+YDDE C+SD VNHAM++VGYT   WILKNWW + WG+NGYM L +  NRCGIANYA
Sbjct: 279 HTGVYDDEVCSSDMVNHAMVIVGYTPTEWILKNWWGNGWGENGYMRLAKNKNRCGIANYA 338

Query: 305 VYALI 309
            YA +
Sbjct: 339 AYAKV 343


>gi|345486539|ref|XP_001604490.2| PREDICTED: cathepsin L2-like [Nasonia vitripennis]
          Length = 332

 Score =  336 bits (861), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 162/301 (53%), Positives = 209/301 (69%), Gaps = 10/301 (3%)

Query: 17  YKKDYRKKAT---DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           YK  + K  T   ++ ++  W+ N  KI+ HN  A  G H Y LR+NH++DL    Y++E
Sbjct: 34  YKMRHNKTYTGTLEAVRREAWEDNLLKIYEHNLLAAAGHHEYILRDNHIADLSTSSYMRE 93

Query: 74  MTRLTHSRIRRTLVRSPESNESVL-----IPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           + +L  SR RR  +   E   +VL     IP  LDWREKGF+T   NQ DCG+CYA+SIA
Sbjct: 94  LVKLVPSRRRR--LDDDEMVAAVLHDPRRIPKSLDWREKGFVTKPENQRDCGSCYAYSIA 151

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            +I GQIF+ T  +  LS QQ+VDCS  +GNLGC+GGSLRNTL Y++ + GLM +  YPY
Sbjct: 152 GSIAGQIFRQTGIVVPLSEQQLVDCSTQTGNLGCSGGSLRNTLRYLERSKGLMTDATYPY 211

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
              Q +CKF+R   VV+++SW++LP +DE AL+  +AT+GPIA SINA P TFQLY SGI
Sbjct: 212 TAHQGVCKFQRKLSVVNVTSWAILPARDERALEAAVATIGPIAASINAGPRTFQLYHSGI 271

Query: 249 YDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308
           YDD  C+SD VNHAML+VGYT N WILKNWW   WG+NGYM L++G NRCG+ANYA YA 
Sbjct: 272 YDDPTCSSDLVNHAMLIVGYTPNYWILKNWWGASWGENGYMRLRKGKNRCGVANYAAYAK 331

Query: 309 I 309
           +
Sbjct: 332 V 332


>gi|322783986|gb|EFZ11138.1| hypothetical protein SINV_08365 [Solenopsis invicta]
          Length = 353

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/310 (51%), Positives = 210/310 (67%), Gaps = 15/310 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K Y K   ++++ + W+ N  +I+ HN  A  G H YTLR+NH++DL+ R Y++E
Sbjct: 45  KTQFNKTYTKNLENARRAV-WEENLVEIYKHNLLAAAGHHSYTLRDNHIADLNTRQYMRE 103

Query: 74  MTRLTHSRIRRTL---VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           M RL  SR RR     + S    +S  IP  LDWRE GF+TP  NQ++CG+CYA+SIA +
Sbjct: 104 MVRLMPSRRRRLPTEPIVSTALKDSRKIPASLDWRECGFVTPPVNQQNCGSCYAYSIAES 163

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           I+GQIFK T  +  +S QQ+VDCS   GNLGC GGSLR TL Y++ + GLM    YPY G
Sbjct: 164 IEGQIFKQTGMLLSVSAQQLVDCSTAIGNLGCTGGSLRTTLKYLEKSKGLMATSMYPYNG 223

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY------ 244
           +Q  CKF+R   VV+I+SW++LP +DE AL++ +AT+GPIA SINA P TFQLY      
Sbjct: 224 EQGECKFQRDQSVVNITSWAILPARDEKALEIAVATIGPIAASINAGPKTFQLYQYQSTR 283

Query: 245 -----ASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCG 299
                + G+YDD  C+SD VNHAML+VGYT   WILKNWW  +WG+NGYM L R  NRCG
Sbjct: 284 IFPLRSKGVYDDHHCSSDMVNHAMLVVGYTPTEWILKNWWGSNWGENGYMRLARNKNRCG 343

Query: 300 IANYAVYALI 309
           +ANYA Y  +
Sbjct: 344 VANYAAYVRV 353


>gi|307178052|gb|EFN66897.1| Cathepsin K [Camponotus floridanus]
          Length = 295

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 154/285 (54%), Positives = 200/285 (70%), Gaps = 3/285 (1%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL 86
           ++ ++  W+ N  +I+ HN  A  G H YTLR+NH++DL  R YI+ M +L  S+ RR L
Sbjct: 12  ENTRRTAWEQNLVEIYKHNLMAAAGHHSYTLRDNHIADLSTRQYIRNMVKLIPSQ-RRRL 70

Query: 87  VRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEE 144
              P   +  +  IP HLDWRE GFIT   NQ++CG+CYA+SI  +IQGQIFK T  +  
Sbjct: 71  PTEPMVSAIHNPHIPKHLDWREYGFITLPVNQQNCGSCYAYSIVESIQGQIFKQTGMLLP 130

Query: 145 LSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVV 204
           LS QQ+VDCS ++GN GC GGSLRNTL Y++ + GLM    YPY  +Q +C+F+R   VV
Sbjct: 131 LSAQQLVDCSTVTGNRGCIGGSLRNTLKYLEKSKGLMAGYLYPYNAEQGVCRFQRDLSVV 190

Query: 205 DISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAML 264
           +I+SW++LP +DE AL+  +AT+GPIAVSINASP TFQLY  G+YDD  C SD VNHAML
Sbjct: 191 NITSWAILPARDEKALEAAVATIGPIAVSINASPKTFQLYHKGVYDDHRCDSDSVNHAML 250

Query: 265 LVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           +VGYT   WILKNWW  +WG++GYM + R  N CGIANYA Y  +
Sbjct: 251 IVGYTPTEWILKNWWGDNWGEDGYMRVARNKNLCGIANYAAYVKV 295


>gi|307195722|gb|EFN77562.1| Cathepsin K [Harpegnathos saltator]
          Length = 345

 Score =  320 bits (821), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 156/300 (52%), Positives = 205/300 (68%), Gaps = 5/300 (1%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K Y K   ++ +++ W+ N  +I+ HN  A  G H YTLR+NH++DL    Y+++
Sbjct: 47  KTQFNKTY-KGNLENARRIAWEQNLVEIYKHNLMAAAGHHSYTLRDNHIADLSSPQYMRK 105

Query: 74  MTRLTHSRIRRTLVRSPESNESVL----IPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           M +L  SR RR     P  + ++     IP  LDWRE GF T   NQ +CG+CYA+SI  
Sbjct: 106 MVKLVPSRRRRLSSSDPMLSATLQQPHNIPARLDWRELGFNTRPVNQRECGSCYAYSIVE 165

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           +IQGQIFK T  +  LS QQ+VDCS  +GN GCAGGSLRNTL Y++ + GLM + +YPYK
Sbjct: 166 SIQGQIFKQTGMLIPLSAQQLVDCSTATGNRGCAGGSLRNTLRYLERSKGLMAKTEYPYK 225

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            +   CKF R   VV+I+SW++LP +DE AL+  +A+VGPIAVSINA P TFQLY  G+Y
Sbjct: 226 AQDGQCKFHRDLSVVNITSWAILPARDETALEAAVASVGPIAVSINAMPKTFQLYHKGVY 285

Query: 250 DDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           DD  C+SD VNHAML+VGYT   WILKNWW  +WG+NGYM L +  NRCGIANYA Y  +
Sbjct: 286 DDHLCSSDTVNHAMLIVGYTPTEWILKNWWGENWGENGYMRLAKNKNRCGIANYAAYVKV 345


>gi|195146732|ref|XP_002014338.1| GL19003 [Drosophila persimilis]
 gi|194106291|gb|EDW28334.1| GL19003 [Drosophila persimilis]
          Length = 335

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 145/299 (48%), Positives = 199/299 (66%), Gaps = 3/299 (1%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K   K Y +   +++    ++ N+K I  HN+  Q G   + L  N ++D+    Y+K 
Sbjct: 37  KKINNKTYSRNFDETRSLKAFEVNYKIIKDHNKNYQDGQTTFRLATNIMADMSTEGYLKN 96

Query: 74  MTRLTHSR---IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
             RL  S+       +     S++   IP+ LDWR KGF TP  NQ+ CG+CYAFSIA +
Sbjct: 97  FLRLLKSQSNVADDNIAEIVGSSQMTNIPESLDWRRKGFTTPSQNQQSCGSCYAFSIAES 156

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           I+GQIFK T +I  LS QQ+VDCS+  GN GC GGSLRNTL Y+Q  GG+M+ +DY Y  
Sbjct: 157 IEGQIFKRTGKILSLSEQQIVDCSVSHGNQGCTGGSLRNTLKYLQSTGGIMRSDDYKYVS 216

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           K+  C+F R   VV+I+SW++LP  +E A++  +A +GPIAVSINA+P TFQLY+ GIYD
Sbjct: 217 KKGKCQFVRDLSVVNITSWAILPVNNEQAIQAAVAHIGPIAVSINATPRTFQLYSDGIYD 276

Query: 251 DEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           D +C S  VNHAML++G+ ++ WILKNWW   WG++GYM LK+G N CGIANYA YA++
Sbjct: 277 DASCVSTSVNHAMLVIGFGKDFWILKNWWGDRWGESGYMRLKKGINLCGIANYAAYAIV 335


>gi|195134024|ref|XP_002011438.1| GI14103 [Drosophila mojavensis]
 gi|193912061|gb|EDW10928.1| GI14103 [Drosophila mojavensis]
          Length = 334

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 139/283 (49%), Positives = 193/283 (68%), Gaps = 11/283 (3%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           ++ NH+ +  HN++   G   + L  N L+D+    Y+K   RL    +R   + + ++ 
Sbjct: 56  YEENHQIVEAHNKDYDSGRSSFRLAANTLADMSTDSYLKGFLRL----LRSPPISASDNM 111

Query: 94  ESVL-------IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
             ++       +PD LDWR+KGF TP +NQ+ CG+CYAFSIA +I+GQ+FK T  I  LS
Sbjct: 112 VDIVGATLMDNVPDSLDWRKKGFATPSYNQQSCGSCYAFSIAQSIEGQVFKRTGRILSLS 171

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDI 206
            QQ+VDCSI  GN GC GGSLRNTL Y+Q  GGLM+  DY Y  K+  C+F     VV++
Sbjct: 172 EQQIVDCSISHGNQGCTGGSLRNTLRYLQATGGLMRSVDYKYASKKGACQFVSELAVVNV 231

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           +SW++LP  DE+A++  +A +GP+AVSINA+P TFQLY+ GIYDD  C+S  VNHAMLL+
Sbjct: 232 TSWAILPANDENAIQAAVAHIGPVAVSINATPKTFQLYSDGIYDDVTCSSTSVNHAMLLI 291

Query: 267 GYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           GY ++ WILKNWW   WG++GYM +++G N CGIANYA YA++
Sbjct: 292 GYDKDYWILKNWWGEKWGESGYMRMRKGINLCGIANYAAYAIV 334


>gi|194761772|ref|XP_001963099.1| GF14107 [Drosophila ananassae]
 gi|190616796|gb|EDV32320.1| GF14107 [Drosophila ananassae]
          Length = 338

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 142/312 (45%), Positives = 205/312 (65%), Gaps = 3/312 (0%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +T  E+   F   + +  + Y +   + +    ++ N+K I  HN+  Q+G   + L+ N
Sbjct: 27  VTESEYKNEFEIFKNENNRKYLRNDDEFRSFKAFEENYKIIEKHNKNFQEGQTSFRLKPN 86

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL---IPDHLDWREKGFITPDWNQE 117
           + +D++   Y+K   RL  S          E   S L   +P+ LDWR KGF+TP  NQ+
Sbjct: 87  NFADMNTDGYLKGYLRLIKSHTEEGADNIAEIVGSPLMTNVPESLDWRNKGFVTPPHNQQ 146

Query: 118 DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177
            CG+CYAFSIA +I GQ+FK T +I  LS QQ+VDCS+  GN GC GGSLRNTLNY+Q  
Sbjct: 147 TCGSCYAFSIAESISGQVFKRTGKILNLSEQQIVDCSVSHGNQGCVGGSLRNTLNYLQST 206

Query: 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
           GGLM+ +DY Y  ++  C+F     VV+++SW++LP  DE A++  +  +GP+A+SINA+
Sbjct: 207 GGLMRADDYKYVSRKGKCQFVSDLSVVNVTSWAILPAHDEQAIQAAVTHIGPVAISINAT 266

Query: 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNR 297
           P TFQLY+ GIYDD  C+S  VNHAML++G+ ++ WILKNWW HHWG++GYM +++G N 
Sbjct: 267 PKTFQLYSDGIYDDPMCSSASVNHAMLIIGFGKDFWILKNWWGHHWGESGYMRIRKGVNM 326

Query: 298 CGIANYAVYALI 309
           CG+ANYA YA++
Sbjct: 327 CGVANYAAYAIV 338


>gi|195473621|ref|XP_002089091.1| GE26053 [Drosophila yakuba]
 gi|194175192|gb|EDW88803.1| GE26053 [Drosophila yakuba]
          Length = 338

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 140/279 (50%), Positives = 194/279 (69%), Gaps = 3/279 (1%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           ++ N+K I  HNQ  + G   + L+ N  +D+    Y+K   RL  S I  +     E  
Sbjct: 60  FEENYKVIEEHNQNFKDGQTSFRLKPNIFADMSTDGYLKGYLRLLKSNIEDSADNMAEIV 119

Query: 94  ESVL---IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQV 150
            S L   +P+ LDWR KGFITP +NQ  CG+CYAFSIA +I GQ+FK T +I  LS QQ+
Sbjct: 120 GSPLMSNVPESLDWRSKGFITPPYNQLSCGSCYAFSIAESIVGQVFKRTGKILSLSKQQI 179

Query: 151 VDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWS 210
           VDCS+  GN GC GGSLRNTL Y+Q  GG+M+EEDYPY  ++  C+F     VV+++SW+
Sbjct: 180 VDCSVSHGNQGCVGGSLRNTLRYLQSTGGIMREEDYPYAARKGKCQFVPDLSVVNVTSWA 239

Query: 211 VLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTR 270
           +LP +DE A++  +A +GP+A+SINASP TFQLY+ GIYDD  C+S  VNHAM+++G+ +
Sbjct: 240 ILPVRDEQAIQAAVAHIGPVAISINASPKTFQLYSDGIYDDPLCSSASVNHAMVVIGFGK 299

Query: 271 NSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           + WILKNWW  +WG+NGY+ +++G N CG+ANYA YA++
Sbjct: 300 DYWILKNWWGQNWGENGYIRIRKGVNMCGMANYAAYAIV 338


>gi|194859829|ref|XP_001969459.1| GG23942 [Drosophila erecta]
 gi|190661326|gb|EDV58518.1| GG23942 [Drosophila erecta]
          Length = 338

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 140/294 (47%), Positives = 200/294 (68%), Gaps = 3/294 (1%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           + Y +   + +    ++ N+K I  HNQ  + G   + L+ N  +D+    Y+K   RL 
Sbjct: 45  RKYLRTYDEMRSYKAFEENYKVIEEHNQNYKDGHSSFRLKPNIFADMSTSGYLKGYLRLL 104

Query: 79  HSRIRRTLVRSPESNESVL---IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            S I  +     E   S L   +P+ LDWR KGFITP +NQ  CG+CYAFSIA +I GQ+
Sbjct: 105 KSNIEDSADNMAEIVGSPLMSNVPESLDWRSKGFITPAYNQLTCGSCYAFSIAESIVGQV 164

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           FK T ++  LS QQ+VDCS+  GN GC GGSLRNTL+Y+Q  GG+M+EEDYPY  ++  C
Sbjct: 165 FKRTGKVLSLSKQQIVDCSVSHGNQGCVGGSLRNTLSYLQSTGGIMREEDYPYVARKGKC 224

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           +F     VV+++SW++LP +DE A++  +A +GP+A+SINASP TFQLY+ GIYDD  C+
Sbjct: 225 QFVHDLSVVNVTSWAILPVRDEQAIQAAVAHIGPVAISINASPKTFQLYSDGIYDDPLCS 284

Query: 256 SDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           S  VNHAM+++G+ ++ WILKNWW  +WG+NGY+ +++G N CG+ANYA YA++
Sbjct: 285 SASVNHAMVVIGFGKDYWILKNWWGPNWGENGYIRIRKGVNMCGMANYAAYAIV 338


>gi|24583376|ref|NP_609387.1| CG5367 [Drosophila melanogaster]
 gi|22946140|gb|AAF52922.2| CG5367 [Drosophila melanogaster]
          Length = 338

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 139/294 (47%), Positives = 199/294 (67%), Gaps = 3/294 (1%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           + Y +   + +    ++ N K I  HNQ  ++G   + L+ N  +D+    Y+K   RL 
Sbjct: 45  RKYLRTYDEMRSYKAFEENFKVIEEHNQNYKEGQTSFRLKPNIFADMSTDGYLKGFLRLL 104

Query: 79  HSRIRRTLVRSPESNESVL---IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            S I  +     E   S L   +P+ LDWR KGFITP +NQ  CG+CYAFSIA +I GQ+
Sbjct: 105 KSNIEDSADNMAEIVGSPLMANVPESLDWRSKGFITPPYNQLSCGSCYAFSIAESIMGQV 164

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           FK T +I  LS QQ+VDCS+  GN GC GGSLRNTL+Y+Q  GG+M+++DYPY  ++  C
Sbjct: 165 FKRTGKILSLSKQQIVDCSVSHGNQGCVGGSLRNTLSYLQSTGGIMRDQDYPYVARKGKC 224

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           +F     VV+++SW++LP +DE A++  +  +GP+A+SINASP TFQLY+ GIYDD  C+
Sbjct: 225 QFVPDLSVVNVTSWAILPVRDEQAIQAAVTHIGPVAISINASPKTFQLYSDGIYDDPLCS 284

Query: 256 SDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           S  VNHAM+++G+ ++ WILKNWW  +WG+NGY+ +++G N CGIANYA YA++
Sbjct: 285 SASVNHAMVVIGFGKDYWILKNWWGQNWGENGYIRIRKGVNMCGIANYAAYAIV 338


>gi|195578153|ref|XP_002078930.1| GD22268 [Drosophila simulans]
 gi|194190939|gb|EDX04515.1| GD22268 [Drosophila simulans]
          Length = 338

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 142/302 (47%), Positives = 202/302 (66%), Gaps = 7/302 (2%)

Query: 15  KKYKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY 70
           +K+K +  +K   +  ++     ++ N K I  HNQ  + G   + L+ N  +D+    Y
Sbjct: 37  EKFKNNNNRKYLRTHDEMRSYKAFEENFKVIEEHNQNYKDGQTSFRLKPNIFADMSTDGY 96

Query: 71  IKEMTRLTHSRIRRTLVRSPESNESVL---IPDHLDWREKGFITPDWNQEDCGACYAFSI 127
           +K   RL  S I  +     E   S L   +PD LDWR KGFITP +NQ  CG+CYAFSI
Sbjct: 97  LKGYLRLLKSNIEDSADNMAEIVGSPLMTNVPDSLDWRSKGFITPPYNQLTCGSCYAFSI 156

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
           A +I GQ+FK T +I  LS QQ+VDCS+  GN GC GGSLRNTL Y+Q  GG+M+++DYP
Sbjct: 157 AESIVGQVFKRTGKILSLSKQQIVDCSVSHGNQGCVGGSLRNTLTYLQSTGGIMRDQDYP 216

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y  ++  C+F     VV++SSW++LP +DE A++  +  +GP+A+SINASP TFQLY+ G
Sbjct: 217 YVARKGKCQFVPDLSVVNVSSWAILPVRDEQAIQAAVTHIGPVAISINASPKTFQLYSDG 276

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYA 307
           IYDD  C+S  VNHAM+++G+ ++ WILKNWW  +WG+NGY+ +++G N CG+ANYA YA
Sbjct: 277 IYDDPLCSSASVNHAMVVIGFAKDYWILKNWWGQNWGENGYIRVRKGVNMCGLANYAAYA 336

Query: 308 LI 309
           ++
Sbjct: 337 IV 338


>gi|195339771|ref|XP_002036490.1| GM11735 [Drosophila sechellia]
 gi|194130370|gb|EDW52413.1| GM11735 [Drosophila sechellia]
          Length = 338

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 141/302 (46%), Positives = 202/302 (66%), Gaps = 7/302 (2%)

Query: 15  KKYKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY 70
           +K+K +  +K   +  ++     ++ N K I  HNQ  + G   + L+ N  +D+    Y
Sbjct: 37  EKFKNNNNRKYIRTYDEMRSYKAFEENFKVIEEHNQNYKDGQTSFRLKPNIFADMSTDGY 96

Query: 71  IKEMTRLTHSRIRRTLVRSPESNESVL---IPDHLDWREKGFITPDWNQEDCGACYAFSI 127
           +K   RL  S I  +     E   S L   +P+ LDWR KGFITP +NQ  CG+CYAFSI
Sbjct: 97  LKGYLRLLKSNIEDSADNMAEIVGSPLMTNVPESLDWRSKGFITPPYNQLTCGSCYAFSI 156

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
           A +I GQ+FK T +I  LS QQ+VDCS+  GN GC GGSLRNTL Y+Q  GG+M+++DYP
Sbjct: 157 AESIVGQVFKRTGKILSLSKQQIVDCSVSHGNQGCVGGSLRNTLTYLQSTGGIMRDQDYP 216

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y  ++  C+F     VV++SSW++LP +DE A++  +  +GP+A+SINASP TFQLY+ G
Sbjct: 217 YVARKGKCQFVADLSVVNVSSWAILPVRDEQAIQAAVTHIGPVAISINASPKTFQLYSDG 276

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYA 307
           IYDD  C+S  VNHAM+++G+ ++ WILKNWW  +WG+NGY+ +++G N CG+ANYA YA
Sbjct: 277 IYDDPLCSSASVNHAMVVIGFAKDYWILKNWWGQNWGENGYIRVRKGVNMCGLANYAAYA 336

Query: 308 LI 309
           ++
Sbjct: 337 IV 338


>gi|263359699|gb|ACY70535.1| hypothetical protein DVIR88_6g0072 [Drosophila virilis]
          Length = 336

 Score =  304 bits (778), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 147/312 (47%), Positives = 205/312 (65%), Gaps = 12/312 (3%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           KE   IF   +K   + Y +   + +    ++ N   ++ HN   + G   + L  N ++
Sbjct: 31  KERFEIF---KKINNRSYARSHDEMRSYEAYEENQIIVNEHNTYYETGKSSFRLATNTMA 87

Query: 64  DLHPRHYIKEMTRLTHS-RIRRT-----LVRSPESNESVLIPDHLDWREKGFITPDWNQE 117
           D++   Y+K   RL  S  I  +     +V SP  N    +P+  DWR+KGFITP +NQ+
Sbjct: 88  DMNTDSYLKGYLRLLRSPEISDSDNIADIVGSPLMNN---VPESFDWRKKGFITPLYNQQ 144

Query: 118 DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177
            CG+CYAFSIA +I+GQ+FK T +I  LS QQ+VDCS+  GN GC GGSLRNTL Y+Q  
Sbjct: 145 SCGSCYAFSIAQSIEGQVFKRTGKIVALSEQQIVDCSVSHGNQGCIGGSLRNTLRYLQAT 204

Query: 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
           GGLM+  DY Y  K+  C+F     VV+++SW++LP +DE+A++  +A +GP+AVSINAS
Sbjct: 205 GGLMRSLDYKYASKKGECQFVSELAVVNVTSWAILPAKDENAIQAAVAHIGPVAVSINAS 264

Query: 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNR 297
           P TFQLY+ GIYDD +CTS  VNHAMLL+G+ +N WILKNWW   WG+ G+M +++G N 
Sbjct: 265 PKTFQLYSEGIYDDVSCTSTSVNHAMLLIGFDKNFWILKNWWGELWGEAGFMRMRKGINL 324

Query: 298 CGIANYAVYALI 309
           CGIANYA YA++
Sbjct: 325 CGIANYAAYAIV 336


>gi|195402187|ref|XP_002059688.1| GJ20892 [Drosophila virilis]
 gi|194155902|gb|EDW71086.1| GJ20892 [Drosophila virilis]
          Length = 308

 Score =  304 bits (778), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 147/312 (47%), Positives = 205/312 (65%), Gaps = 12/312 (3%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           KE   IF   +K   + Y +   + +    ++ N   ++ HN   + G   + L  N ++
Sbjct: 3   KERFEIF---KKINNRSYARSHDEMRSYEAYEENQIIVNEHNTYYETGKSSFRLATNTMA 59

Query: 64  DLHPRHYIKEMTRLTHS-RIRRT-----LVRSPESNESVLIPDHLDWREKGFITPDWNQE 117
           D++   Y+K   RL  S  I  +     +V SP  N    +P+  DWR+KGFITP +NQ+
Sbjct: 60  DMNTDSYLKGYLRLLRSPEISDSDNIADIVGSPLMNN---VPESFDWRKKGFITPLYNQQ 116

Query: 118 DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177
            CG+CYAFSIA +I+GQ+FK T +I  LS QQ+VDCS+  GN GC GGSLRNTL Y+Q  
Sbjct: 117 SCGSCYAFSIAQSIEGQVFKRTGKIVALSEQQIVDCSVSHGNQGCIGGSLRNTLRYLQAT 176

Query: 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
           GGLM+  DY Y  K+  C+F     VV+++SW++LP +DE+A++  +A +GP+AVSINAS
Sbjct: 177 GGLMRSLDYKYASKKGECQFVSELAVVNVTSWAILPAKDENAIQAAVAHIGPVAVSINAS 236

Query: 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNR 297
           P TFQLY+ GIYDD +CTS  VNHAMLL+G+ +N WILKNWW   WG+ G+M +++G N 
Sbjct: 237 PKTFQLYSEGIYDDVSCTSTSVNHAMLLIGFDKNFWILKNWWGELWGEAGFMRMRKGINL 296

Query: 298 CGIANYAVYALI 309
           CGIANYA YA++
Sbjct: 297 CGIANYAAYAIV 308


>gi|195064100|ref|XP_001996497.1| GH23974 [Drosophila grimshawi]
 gi|193892043|gb|EDV90909.1| GH23974 [Drosophila grimshawi]
          Length = 337

 Score =  299 bits (766), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 139/305 (45%), Positives = 204/305 (66%), Gaps = 17/305 (5%)

Query: 19  KDYRKKATDSKKKLH--------WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY 70
           ++++K    S  +LH        ++ N + ++ HN+  + G   + L  N ++D++   Y
Sbjct: 36  ENFKKINNKSYMRLHDEIRSYKSFEENIRIVNEHNKFYETGKSSFRLSTNTMADMNTDSY 95

Query: 71  IKEMTRLTHSRIRRT------LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYA 124
           ++   RL  S    T      +V SP  N    +P+  DWR+KGF TP +NQ+ CG+CYA
Sbjct: 96  LQGFLRLLRSPPNSTTDNIADIVGSPLMNN---VPESFDWRKKGFNTPPYNQQSCGSCYA 152

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           FS+A +I+GQ+FK T ++  LS QQ+VDCS+  GN GC GGSLRNTL Y+Q  GGLM+  
Sbjct: 153 FSVAQSIEGQVFKRTGKLLALSEQQIVDCSVSHGNHGCIGGSLRNTLTYLQATGGLMRSL 212

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
           DY Y  K+  C+F +   VV+++SW++LP  DE+A++  +  VGP+AVSINA+P TFQLY
Sbjct: 213 DYKYAAKKGDCQFVKELAVVNVTSWAILPANDENAIQAAVVHVGPVAVSINATPKTFQLY 272

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYA 304
           ++GIYDD AC+S  VNHAMLL+G+ ++ WILKNWW   WG++G+M +++G N CGIANYA
Sbjct: 273 SAGIYDDVACSSTSVNHAMLLIGFDKDFWILKNWWGELWGESGFMRIRKGINLCGIANYA 332

Query: 305 VYALI 309
            YA++
Sbjct: 333 AYAIV 337


>gi|193617639|ref|XP_001952206.1| PREDICTED: cathepsin L-like [Acyrthosiphon pisum]
          Length = 226

 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 128/208 (61%), Positives = 166/208 (79%)

Query: 102 LDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLG 161
           +DWR++GF TP WNQ DCGACYAFSIAS ++GQ+FK+T ++  LS QQ++DCSI  GNLG
Sbjct: 4   VDWRKRGFNTPGWNQLDCGACYAFSIASMLEGQLFKATGKLHTLSSQQIIDCSIAYGNLG 63

Query: 162 CAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALK 221
           C+GGSL+NTL Y++  GG+M+  +Y YK ++++C FK+   V  I   S+LP  DEHALK
Sbjct: 64  CSGGSLKNTLQYLKRVGGIMQGIEYSYKARKTLCHFKKFRAVTQIEKISILPQSDEHALK 123

Query: 222 VTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSH 281
           V +A +GPI+VS+NASP TFQLY+SG+YDD AC+S  VNHAMLLVGYT+++WILKNWWS 
Sbjct: 124 VAVALIGPISVSVNASPKTFQLYSSGVYDDPACSSSTVNHAMLLVGYTKDAWILKNWWSS 183

Query: 282 HWGDNGYMYLKRGNNRCGIANYAVYALI 309
            WGD+GYMYL RG N+C ++ YA YA I
Sbjct: 184 KWGDDGYMYLARGKNQCAVSTYAAYATI 211


>gi|357611722|gb|EHJ67628.1| cathepsin L-like proteinase [Danaus plexippus]
          Length = 354

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 139/301 (46%), Positives = 181/301 (60%), Gaps = 12/301 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + KY K Y+ +  +      W+SN K++  HNQE   G   YTL  NH  D     YIK+
Sbjct: 55  KTKYNKKYQSRFHERSALSTWRSNMKRVAGHNQEYLAGKQAYTLHLNHFGDWSIFSYIKQ 114

Query: 74  MTRLTHSRI--------RRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           + +L  +          RRT  R+        +P+ +DWREKGF      Q  CGACYAF
Sbjct: 115 LLKLIRTLPLFDPAEDRRRTTYRNTFDTR---LPERVDWREKGFRPRLEEQFHCGACYAF 171

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           +I  A+Q Q++K   +  ELS QQ+VDCS   GN GC GGSL+  L YV    GL++E  
Sbjct: 172 AITHAVQAQVYKRHGDWRELSPQQIVDCSFKDGNFGCDGGSLQAALRYVA-RDGLIRETY 230

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPY G++  C +   ++   +  WS LPP DE A++  LAT+GP+AV++NA+P TFQLY 
Sbjct: 231 YPYIGQRGACHYNSESVSARVRRWSSLPPGDEAAMERALATLGPLAVAVNAAPFTFQLYR 290

Query: 246 SGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAV 305
           SGIYDD  C S ++NHAMLLVGYT   WIL NWW   WG+NGYM +KRG N CG+AN A 
Sbjct: 291 SGIYDDPFCVSWHLNHAMLLVGYTPEYWILLNWWGEQWGENGYMRIKRGLNICGVANMAT 350

Query: 306 Y 306
           Y
Sbjct: 351 Y 351


>gi|242003816|ref|XP_002422872.1| Cathepsin J precursor, putative [Pediculus humanus corporis]
 gi|212505754|gb|EEB10134.1| Cathepsin J precursor, putative [Pediculus humanus corporis]
          Length = 257

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 115/212 (54%), Positives = 159/212 (75%), Gaps = 5/212 (2%)

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
           IP+  +W E+GF TP W+Q++CG+CYAFSIAS+ QGQ F+ T ++ +LS+QQ+VDCS+ +
Sbjct: 34  IPEEWNWLEQGFFTPSWDQQNCGSCYAFSIASSAQGQFFRKTGKLRDLSVQQIVDCSVTN 93

Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
           GNLGC GGSLRN+L Y    GGLM   +YPY  +Q ICK++  N  V+++S+ +LP  DE
Sbjct: 94  GNLGCYGGSLRNSLKYCMKVGGLMSANEYPYSARQKICKYRPWNRSVNVTSYVILPEYDE 153

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKN 277
            A++  +ATVGP+A S++ASP+T      GIYDD  C+   VNHAML+VGYT+++WILKN
Sbjct: 154 EAIQEAVATVGPVACSVDASPYT-----RGIYDDPNCSHTKVNHAMLIVGYTKDAWILKN 208

Query: 278 WWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           WW  HWG +GYM+LK+G N+C IA YA Y ++
Sbjct: 209 WWGEHWGIDGYMFLKKGVNQCAIAKYAGYPVV 240


>gi|148298724|ref|NP_001091806.1| cathepsin L-like proteinase precursor [Bombyx mori]
 gi|116272515|gb|ABJ97193.1| cathepsin L-like proteinase [Bombyx mori]
          Length = 402

 Score =  259 bits (661), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 126/285 (44%), Positives = 174/285 (61%), Gaps = 15/285 (5%)

Query: 32  LHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPE 91
           + W+ N +++  HN+E   G+  Y+L  NH  D+H   Y  ++ +L    I+   +  P 
Sbjct: 122 MKWRQNLRRVARHNREYLAGIQSYSLHLNHFGDMHVTEYFGKVLKL----IKAFPLFDPA 177

Query: 92  S---------NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
                     N    +P  +DWR++GF      Q  CGACYAF++  A+Q Q++K   E 
Sbjct: 178 EDHHKTAYRHNRRCKVPKRIDWRDQGFKPRREEQWQCGACYAFAVTHALQAQLYKRHGEW 237

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI 202
            ELS QQ+VDCSI  GN+GC GGSLR  L Y     GL+ E  YPY GK+  C++    +
Sbjct: 238 NELSPQQIVDCSIKDGNMGCDGGSLRGALRYAA-REGLVMESHYPYVGKKGYCRYDSNLV 296

Query: 203 VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHA 262
                 W+ LP  DE A++  LATVGP+AV++NA+P TFQLY SG+YDD  C S ++NHA
Sbjct: 297 RARPRRWATLPSGDEEAMEKALATVGPLAVAVNAAPFTFQLY-SGVYDDPFCVSWHLNHA 355

Query: 263 MLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYA 307
           MLLVGYT++ WIL NWW  +WG++GYM ++RG NRCG+AN A Y 
Sbjct: 356 MLLVGYTQDYWILLNWWGRNWGEDGYMRIRRGLNRCGVANMATYV 400


>gi|401758210|gb|AFQ01140.1| cathepsin L4-like protease, partial [Chilo suppressalis]
          Length = 325

 Score =  250 bits (638), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 132/304 (43%), Positives = 172/304 (56%), Gaps = 12/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           Q  + K Y     +      W+ N K I  HN+    G   YTL  N  +D HP  Y K+
Sbjct: 26  QTIFDKAYDSHRDEMAALSQWRRNLKLIAEHNKRFLAGEISYTLHLNQFADWHPEEYFKK 85

Query: 74  MTRLTHS--------RIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           + +L  +         I R+  R   +     IPD +DW  KGF      Q  CGACYAF
Sbjct: 86  ILKLFDTIPLLDPALDIHRSHYRHLANKA---IPDRVDWSAKGFKPKLEEQWQCGACYAF 142

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           ++A A+Q Q++K      ELS QQ+VDCS   GN GC GGSLR    Y   +G L+ E+ 
Sbjct: 143 AVAHAVQAQLYKKHGLWGELSPQQIVDCSAADGNEGCDGGSLRGAFRYAARSG-LVSEQY 201

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPY GK+  CK           +W++LP  DE A++  LAT+GP+AV +NASP TFQLY 
Sbjct: 202 YPYTGKKGHCKSSGLLARTKPKNWAMLPFGDEDAMEKALATIGPLAVGVNASPFTFQLYR 261

Query: 246 SGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAV 305
           SG+YDD  C    +NHAMLLVGYT + WIL NWW   WG++GYM ++RG NRCG+AN A 
Sbjct: 262 SGVYDDPFCVPWALNHAMLLVGYTPDYWILLNWWGKKWGEDGYMRIRRGYNRCGVANMAA 321

Query: 306 YALI 309
           Y ++
Sbjct: 322 YVVL 325


>gi|47523662|ref|NP_999467.1| cathepsin K precursor [Sus scrofa]
 gi|15213940|sp|Q9GLE3.1|CATK_PIG RecName: Full=Cathepsin K; Flags: Precursor
 gi|10048286|gb|AAG12340.1|AF292030_1 cathepsin K precursor [Sus scrofa]
          Length = 330

 Score =  230 bits (586), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 122/302 (40%), Positives = 174/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y+K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 31  KKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 90

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 91  MTGLKVPPSHSRSNDTLYIPDWEGRT---PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVG 147

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 148 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 205

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 206 GQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 265

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE C SD +NHA+L VGY     +  WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 266 YDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 325

Query: 305 VY 306
            +
Sbjct: 326 SF 327


>gi|77404197|ref|NP_001029168.1| cathepsin K precursor [Canis lupus familiaris]
 gi|122056102|sp|Q3ZKN1.1|CATK_CANFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|58047562|gb|AAW65150.1| cathepsin K [Canis lupus familiaris]
          Length = 330

 Score =  229 bits (585), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 174/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y+K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 31  KKTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 90

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL      + +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 91  MTGLKVPPSHSRSNDTLYIPDWESRA---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 147

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 148 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 205

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y+ G+Y
Sbjct: 206 GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVY 265

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 266 YDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 325

Query: 305 VY 306
            +
Sbjct: 326 SF 327


>gi|13928758|ref|NP_113748.1| cathepsin K precursor [Rattus norvegicus]
 gi|12585195|sp|O35186.1|CATK_RAT RecName: Full=Cathepsin K; Flags: Precursor
 gi|2305208|gb|AAB65743.1| cathepsin K [Rattus norvegicus]
 gi|50927597|gb|AAH78793.1| Cathepsin K [Rattus norvegicus]
 gi|149030667|gb|EDL85704.1| cathepsin K, isoform CRA_a [Rattus norvegicus]
          Length = 329

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/301 (41%), Positives = 172/301 (57%), Gaps = 12/301 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K Y  K  +  ++L W+ N KKI  HN EA  G H Y L  NHL D+     +++
Sbjct: 30  KKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MT--RLTHSR-IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           MT  R+  SR      + +PE    V  PD +D+R+KG++TP  NQ  CG+C+AFS A A
Sbjct: 90  MTGLRVPPSRSFSNDTLYTPEWEGRV--PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGA 147

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+ K T ++  LS Q +VDC  +S N GC GG +     YVQ  GG+  E+ YPY G
Sbjct: 148 LEGQLKKKTGKLLALSPQNLVDC--VSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVG 205

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C +           +  +P  +E ALK  +A VGP++VSI+AS  +FQ Y+ G+Y 
Sbjct: 206 QDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYY 265

Query: 251 DEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           DE C  D VNHA+L+VGY        WI+KN W   WG+ GY+ L R  NN CGI N A 
Sbjct: 266 DENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARNKNNACGITNLAS 325

Query: 306 Y 306
           +
Sbjct: 326 F 326


>gi|49456399|emb|CAG46520.1| CTSK [Homo sapiens]
          Length = 329

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 176/302 (58%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL   PE       PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPLSHSRSNDTLY-IPEWEGRA--PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 265 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|4503151|ref|NP_000387.1| cathepsin K preproprotein [Homo sapiens]
 gi|1168793|sp|P43235.1|CATK_HUMAN RecName: Full=Cathepsin K; AltName: Full=Cathepsin O; AltName:
           Full=Cathepsin O2; AltName: Full=Cathepsin X; Flags:
           Precursor
 gi|562757|emb|CAA57649.1| Cathepsin O [Homo sapiens]
 gi|606923|gb|AAA65233.1| cathepsin O [Homo sapiens]
 gi|1195556|gb|AAB35521.1| cathepsin O2 [Homo sapiens]
 gi|16359188|gb|AAH16058.1| Cathepsin K [Homo sapiens]
 gi|49456311|emb|CAG46476.1| CTSK [Homo sapiens]
 gi|60823594|gb|AAX36649.1| cathepsin K [synthetic construct]
 gi|119573901|gb|EAW53516.1| cathepsin K (pycnodysostosis), isoform CRA_b [Homo sapiens]
 gi|307685681|dbj|BAJ20771.1| cathepsin K [synthetic construct]
 gi|312150424|gb|ADQ31724.1| cathepsin K [synthetic construct]
          Length = 329

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 176/302 (58%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL   PE       PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPLSHSRSNDTLY-IPEWEGRA--PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 265 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|60654335|gb|AAX29858.1| cathepsin K [synthetic construct]
 gi|60654337|gb|AAX29859.1| cathepsin K [synthetic construct]
          Length = 330

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 176/302 (58%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL   PE       PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPLSHSRSNDTLY-IPEWEGRA--PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 265 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|397492864|ref|XP_003817340.1| PREDICTED: cathepsin K [Pan paniscus]
          Length = 343

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 175/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 44  KKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 103

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 104 MTGLKVPLSHSRSNDTLYIPDWEGRA---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 160

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 161 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 218

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 219 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 278

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 279 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 338

Query: 305 VY 306
            +
Sbjct: 339 SF 340


>gi|395729888|ref|XP_002810309.2| PREDICTED: cathepsin K [Pongo abelii]
          Length = 343

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 175/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 44  KKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 103

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 104 MTGLKVPLSHSRSNDTLYIPDWEGRA---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 160

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 161 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 218

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 219 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 278

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 279 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 338

Query: 305 VY 306
            +
Sbjct: 339 SF 340


>gi|6435586|pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435587|pdb|7PCK|B Chain B, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435588|pdb|7PCK|C Chain C, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435589|pdb|7PCK|D Chain D, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435592|pdb|1BY8|A Chain A, The Crystal Structure Of Human Procathepsin K
          Length = 314

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 176/302 (58%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 15  KKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 74

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL   PE       PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 75  MTGLKVPLSHSRSNDTLY-IPEWEGRA--PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 131

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 132 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 189

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 190 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 249

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 250 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 309

Query: 305 VY 306
            +
Sbjct: 310 SF 311


>gi|332220191|ref|XP_003259241.1| PREDICTED: cathepsin K [Nomascus leucogenys]
          Length = 329

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 175/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPPSHSRSNDTLYIPDWEGRA---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 265 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|426331364|ref|XP_004026652.1| PREDICTED: cathepsin K [Gorilla gorilla gorilla]
          Length = 329

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 175/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPLSHSRSNDTLYIPDWEGRA---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 265 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|31982433|ref|NP_031828.2| cathepsin K precursor [Mus musculus]
 gi|12644320|sp|P55097.2|CATK_MOUSE RecName: Full=Cathepsin K; Flags: Precursor
 gi|3550487|emb|CAA06825.1| cathepsin K [Mus musculus]
 gi|12834090|dbj|BAB22783.1| unnamed protein product [Mus musculus]
 gi|28277388|gb|AAH46320.1| Cathepsin K [Mus musculus]
 gi|74209960|dbj|BAE21279.1| unnamed protein product [Mus musculus]
 gi|148706870|gb|EDL38817.1| cathepsin K, isoform CRA_a [Mus musculus]
          Length = 329

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 173/301 (57%), Gaps = 12/301 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K+I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MT--RLTHSR-IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           MT  R+  SR      + +PE    V  PD +D+R+KG++TP  NQ  CG+C+AFS A A
Sbjct: 90  MTGLRIPPSRSYSNDTLYTPEWEGRV--PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGA 147

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+ K T ++  LS Q +VDC  ++ N GC GG +     YVQ  GG+  E+ YPY G
Sbjct: 148 LEGQLKKKTGKLLALSPQNLVDC--VTENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVG 205

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C +           +  +P  +E ALK  +A VGPI+VSI+AS  +FQ Y+ G+Y 
Sbjct: 206 QDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYY 265

Query: 251 DEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           DE C  D VNHA+L+VGY        WI+KN W   WG+ GY  L R  NN CGI N A 
Sbjct: 266 DENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMAS 325

Query: 306 Y 306
           +
Sbjct: 326 F 326


>gi|301767944|ref|XP_002919404.1| PREDICTED: cathepsin K-like [Ailuropoda melanoleuca]
 gi|281352889|gb|EFB28473.1| hypothetical protein PANDA_008011 [Ailuropoda melanoleuca]
          Length = 330

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 173/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 31  KKTYGKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 90

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL      + +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 91  MTGLKVPPSHSRNNDTLYIPDWESRA---PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVG 147

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 148 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 205

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y+ G+Y
Sbjct: 206 GQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVY 265

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 266 YDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 325

Query: 305 VY 306
            +
Sbjct: 326 SF 327


>gi|114559412|ref|XP_001171151.1| PREDICTED: cathepsin K isoform 4 [Pan troglodytes]
 gi|410221358|gb|JAA07898.1| cathepsin K [Pan troglodytes]
 gi|410248298|gb|JAA12116.1| cathepsin K [Pan troglodytes]
 gi|410301088|gb|JAA29144.1| cathepsin K [Pan troglodytes]
 gi|410351445|gb|JAA42326.1| cathepsin K [Pan troglodytes]
          Length = 329

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 175/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPLSHSRSNDTLYIPDWEGRA---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFEYVQKNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 265 FDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|431896622|gb|ELK06034.1| Cathepsin K [Pteropus alecto]
          Length = 330

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/305 (40%), Positives = 173/305 (56%), Gaps = 20/305 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y  K  ++ ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 31  KKSYGKQYDSKVDETSRRLIWEKNLKHISIHNLEAALGVHTYELAMNHLGDMTSEEVVQK 90

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFS 126
           MT L     R        SN+++ IPD        +D+R+KG++TP  NQ  CG+C+AFS
Sbjct: 91  MTGLKVPPSRS------RSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFS 144

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ Y
Sbjct: 145 SVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAY 202

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y  
Sbjct: 203 PYVGQDESCMYNPTGKAAKCRGYKEIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRK 262

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           G+Y DE C SD +NHA+L VGY     R  WI+KN W  +WG+ GY+ + R  NN CGIA
Sbjct: 263 GVYYDENCNSDNLNHAVLAVGYGIQKGRKHWIIKNSWGENWGNKGYVLMARNKNNACGIA 322

Query: 302 NYAVY 306
           N A +
Sbjct: 323 NLASF 327


>gi|332024535|gb|EGI64733.1| Cathepsin J [Acromyrmex echinatior]
          Length = 169

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 100/165 (60%), Positives = 125/165 (75%)

Query: 145 LSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVV 204
           +S QQ+VDCS I+GNLGC GGSLRNTL Y++ + GLM    YPY  +Q  C+F++   VV
Sbjct: 5   VSAQQLVDCSTITGNLGCTGGSLRNTLKYLEKSKGLMARSTYPYDAEQGECRFEKDQSVV 64

Query: 205 DISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAML 264
           +I+SW++LP +DE AL++ +AT+GP+A SINASP TFQLY  G+YDD  C+SD VNHAML
Sbjct: 65  NITSWAILPARDEKALQIAVATIGPVAASINASPKTFQLYHKGVYDDHRCSSDMVNHAML 124

Query: 265 LVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           +VGYT   WILKNWW   WG+NGYM L R  NRCGIANYA Y  +
Sbjct: 125 IVGYTPTEWILKNWWGDSWGENGYMRLARNKNRCGIANYAAYVKV 169


>gi|310975577|gb|ADP55137.1| cathepsin S [Miichthys miiuy]
          Length = 338

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/304 (41%), Positives = 176/304 (57%), Gaps = 11/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K YR    D  ++  W+ N   I  HN EA  GLH Y L  NH+ DL P   ++ 
Sbjct: 38  KKMHGKTYRNYVEDESRRELWEKNLVLITMHNLEASMGLHTYKLSMNHMGDLTPEEIMQS 97

Query: 74  MTRLTH-SRIRRTLVRSPESNES-VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
              LT  + I+R    SP +  S   +PD +DWREKG +T    Q  CG+C+AFS A A+
Sbjct: 98  FATLTPPTDIQR--APSPFAGTSGAAVPDTMDWREKGCVTSVKMQGACGSCWAFSAAGAL 155

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+ K+T ++ +LS Q +VDCS   GN GC GG +     YV    G+  +  YPY G+
Sbjct: 156 EGQLAKTTGKLVDLSPQNLVDCSTKYGNHGCNGGFMHKAFQYVIDNHGIDSDAAYPYTGR 215

Query: 192 QSI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           QS  C +       + S +S LP  DE ALK  LAT+GPI+V+I+A    F  Y+SG+YD
Sbjct: 216 QSQECHYSPKFRAANCSQYSFLPEGDEGALKQALATIGPISVAIDARRPRFAFYSSGVYD 275

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D +C+ D VNH +L VGY     ++ W++KN W   +GDNGY+ + R  N++CGIA Y  
Sbjct: 276 DPSCSQD-VNHGVLAVGYGTLNGQDYWLVKNSWGQTFGDNGYIRMARNKNDQCGIARYGC 334

Query: 306 YALI 309
           Y ++
Sbjct: 335 YPIM 338


>gi|74136185|ref|NP_001027984.1| cathepsin K precursor [Macaca mulatta]
 gi|47117667|sp|P61276.1|CATK_MACFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|47117668|sp|P61277.1|CATK_MACMU RecName: Full=Cathepsin K; Flags: Precursor
 gi|3236470|gb|AAC23694.1| cathepsin K [Macaca fascicularis]
 gi|4927694|gb|AAD33249.1| cathepsin K [Macaca mulatta]
 gi|355558400|gb|EHH15180.1| hypothetical protein EGK_01237 [Macaca mulatta]
 gi|355763132|gb|EHH62118.1| hypothetical protein EGM_20317 [Macaca fascicularis]
 gi|380809978|gb|AFE76864.1| cathepsin K preproprotein [Macaca mulatta]
 gi|383416065|gb|AFH31246.1| cathepsin K preproprotein [Macaca mulatta]
 gi|384945478|gb|AFI36344.1| cathepsin K preproprotein [Macaca mulatta]
          Length = 329

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 175/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPASHSRSNDTLYIPDWEGRA---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 265 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|354472953|ref|XP_003498701.1| PREDICTED: cathepsin K [Cricetulus griseus]
          Length = 329

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/302 (41%), Positives = 172/302 (56%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HS    TL   PE       PD +D+R+KG++TP  NQ +CG+C+AFS A 
Sbjct: 90  MTGLKLPPSHSHSNDTLY-IPEWEGRA--PDAIDYRKKGYVTPVKNQGECGSCWAFSSAG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG +     YVQ  GG+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENYGCGGGYMTTAFRYVQTNGGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C +           +  +P   E ALK  +A VGPI+VSI+AS  +FQ Y+ G+Y
Sbjct: 205 GQDQSCMYNPTAKAAKCRGYREIPVGSEKALKRAVARVGPISVSIDASLTSFQFYSRGVY 264

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE C  D VNHA+L+VGY        WI+KN W   WG+ GY+ L R  NN CGI N A
Sbjct: 265 YDENCDGDNVNHAVLVVGYGAQKGNKHWIIKNSWGESWGNKGYVLLARNRNNACGITNLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|149751227|ref|XP_001490649.1| PREDICTED: cathepsin K-like [Equus caballus]
          Length = 329

 Score =  228 bits (580), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 173/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y+K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +H+R   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPPSHTRSNDTLYIPDWEGRA---PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQDESCMYNPTGKAAKCRGYREIPQGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 265 YDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANMA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|355681653|gb|AER96814.1| cathepsin K [Mustela putorius furo]
          Length = 329

 Score =  228 bits (580), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/309 (40%), Positives = 175/309 (56%), Gaps = 28/309 (9%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 31  KKTYGKQYNNKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 90

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGAC 122
           MT L    +HSR          SN+S+ IPD        +D+R+KG++TP  NQ  CG+C
Sbjct: 91  MTGLKVPPSHSR----------SNDSLYIPDWESRAPDSIDYRKKGYVTPVKNQGQCGSC 140

Query: 123 YAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMK 182
           +AFS   A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  
Sbjct: 141 WAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDS 198

Query: 183 EEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
           E+ YPY G+   C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ
Sbjct: 199 EDAYPYVGQDESCMYNPTGKAAKCKGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQ 258

Query: 243 LYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNR 297
            Y+ G+Y DE C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN 
Sbjct: 259 FYSKGVYYDENCNSDNLNHAVLAVGYGVQKGNKHWIIKNSWGENWGNKGYILMARNKNNA 318

Query: 298 CGIANYAVY 306
           CGIAN A +
Sbjct: 319 CGIANLASF 327


>gi|186688053|gb|ACC86112.1| cathepsin K [Paralichthys olivaceus]
          Length = 330

 Score =  228 bits (580), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 114/299 (38%), Positives = 168/299 (56%), Gaps = 8/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           ++++Y     +  ++  W+ N + I  HN+EA  G+H Y L  NHL D+      ++MT 
Sbjct: 34  HRREYNGLGEEGIRRAVWEKNMRMIVAHNEEAALGMHSYELGMNHLGDMTSEEVAEKMTG 93

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L     R+             +P  +D+R++G +TP  NQ  CG+C+AFS A A++GQ+ 
Sbjct: 94  LQVPLERQRSFTMALDERVSKLPKFVDYRKEGMVTPVKNQGSCGSCWAFSSAGALEGQLA 153

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K T ++ +LS Q  VDC  ++ N GC GG + N   YVQ  GG+  EE YPY G+   C+
Sbjct: 154 KKTGQLMDLSPQNPVDC--VTENNGCGGGYMTNAFQYVQENGGIDSEEAYPYVGEDQSCR 211

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +    +      +  +P  DEHAL V L  VGP++V I+AS  +FQ Y  G+Y D  C  
Sbjct: 212 YNSSGMAAQCKGYKEVPVGDEHALAVALFKVGPVSVGIDASQSSFQFYQRGVYYDRNCNK 271

Query: 257 DYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           D +NHA+L VGY  +S     WI+KN WS +WG  GY+ + R  +N CGIAN A Y ++
Sbjct: 272 DDINHAVLAVGYGISSKGKKYWIIKNSWSENWGKKGYILMARNRDNLCGIANLASYPIM 330


>gi|402856109|ref|XP_003892642.1| PREDICTED: cathepsin K [Papio anubis]
          Length = 348

 Score =  228 bits (580), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 175/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 49  KKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQK 108

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 109 MTGLKVPASHSRSNDTLYIPDWEGRA---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 165

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 166 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 223

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 224 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 283

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 284 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 343

Query: 305 VY 306
            +
Sbjct: 344 SF 345


>gi|130502110|ref|NP_001076110.1| cathepsin K precursor [Oryctolagus cuniculus]
 gi|1168794|sp|P43236.1|CATK_RABIT RecName: Full=Cathepsin K; AltName: Full=Protein OC-2; Flags:
           Precursor
 gi|454187|dbj|BAA03125.1| OC-2 protein [Oryctolagus cuniculus]
          Length = 329

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 122/305 (40%), Positives = 172/305 (56%), Gaps = 20/305 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFS 126
           MT L     R        SN+++ IPD        +D+R+KG++TP  NQ  CG+C+AFS
Sbjct: 90  MTGLKVPPSRS------HSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFS 143

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ Y
Sbjct: 144 SVGALEGQLKKKTGKLLNLSPQNLVDC--VSENYGCGGGYMTNAFQYVQRNRGIDSEDAY 201

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ 
Sbjct: 202 PYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSK 261

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           G+Y DE C+SD VNHA+L VGY        WI+KN W   WG+ GY+ + R  NN CGIA
Sbjct: 262 GVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKGYILMARNKNNACGIA 321

Query: 302 NYAVY 306
           N A +
Sbjct: 322 NLASF 326


>gi|836934|gb|AAA95998.1| cathepsin X [Homo sapiens]
          Length = 329

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 175/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +   +L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHRKQYNNKVDEISPRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   TL   PE       PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPLSHSRSNDTLY-IPEWEGRA--PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 265 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|417409774|gb|JAA51378.1| Putative cathepsin k, partial [Desmodus rotundus]
          Length = 331

 Score =  227 bits (579), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 174/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y+K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 32  KKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 91

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HSR   T        +   +PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 92  MTGLKVPPSHSRSNDTRYVPDWEGK---VPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVG 148

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N  +YVQ   G+  E+ YPY 
Sbjct: 149 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFHYVQKNQGIDSEDAYPYV 206

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y+ G+Y
Sbjct: 207 GQDESCMYNPTGKAAKCRGYKEIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVY 266

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            D+ C SD +NHA+L VGY     +  WI+KN W   WG+ GY+ + R  NN CGIAN A
Sbjct: 267 YDKNCNSDNLNHAVLAVGYGIQKRKKHWIIKNSWGESWGNKGYILMARNKNNACGIANLA 326

Query: 305 VY 306
            +
Sbjct: 327 SF 328


>gi|1149525|emb|CAA64218.1| preprocathepsin K [Mus musculus]
          Length = 329

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 12/301 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K+I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MT--RLTHSR-IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           MT  R+  SR      + +PE    V  PD +D+R+KG++TP  NQ  CG+C+AFS A A
Sbjct: 90  MTGLRIPPSRSYSNDTLYTPEWEGRV--PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGA 147

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+ K T ++  LS Q +VDC  ++ N GC GG +     YVQ  GG+  E+ +PY G
Sbjct: 148 LEGQLKKKTGKLLALSPQNLVDC--VTENYGCGGGYMTTAFQYVQQNGGIDSEDAFPYVG 205

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C +           +  +P  +E ALK  +A VGPI+VSI+AS  +FQ Y+ G+Y 
Sbjct: 206 QDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYY 265

Query: 251 DEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           DE C  D VNHA+L+VGY        WI+KN W   WG+ GY  L R  NN CGI N A 
Sbjct: 266 DENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMAS 325

Query: 306 Y 306
           +
Sbjct: 326 F 326


>gi|395856027|ref|XP_003800444.1| PREDICTED: cathepsin K [Otolemur garnettii]
          Length = 329

 Score =  227 bits (578), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 122/305 (40%), Positives = 174/305 (57%), Gaps = 20/305 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K+Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHRKEYDSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFS 126
           MT L     R        SN+++ IPD        +D+R+KG++TP  NQ  CG+C+AFS
Sbjct: 90  MTGLKVPPSRS------HSNDTLYIPDWEGRAPDSIDYRKKGYVTPVKNQGQCGSCWAFS 143

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ Y
Sbjct: 144 SVGALEGQLKKKTGKLLNLSPQNLVDC--VSDNDGCGGGYMTNAFQYVQKNRGIDSEDAY 201

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   C +           +  +P  +E ALK  +A VGPI+V I+AS  +FQ Y+ 
Sbjct: 202 PYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVGIDASLTSFQFYSK 261

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           G+Y DE+C SD VNHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIA
Sbjct: 262 GVYYDESCNSDNVNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIA 321

Query: 302 NYAVY 306
           N A +
Sbjct: 322 NLASF 326


>gi|334332718|ref|XP_001367502.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 333

 Score =  227 bits (578), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 118/294 (40%), Positives = 172/294 (58%), Gaps = 16/294 (5%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM----TRLTHSRI 82
           DS ++  W+ N K I  HNQE   G H + LR N   D+    + + M    +  +  R 
Sbjct: 45  DSLRRATWEKNLKMIERHNQEYSAGKHSFQLRMNKFGDMSTEEFKQVMNGYKSNGSQRRT 104

Query: 83  RRTLVRSPESNESVL--IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTS 140
           + +L R     ES+L  +P+ +DWREKG++TP   Q DCGAC++FS   AI+GQ F+ T 
Sbjct: 105 KGSLYR-----ESLLAQLPESVDWREKGYVTPVKEQGDCGACWSFSAVGAIEGQWFRKTG 159

Query: 141 EIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRP 200
           ++  LSIQ ++DC+I  GN GC GG + N   YVQ  GG+  EE YPY  + + CK+K  
Sbjct: 160 KLVSLSIQNLIDCTIPEGNNGCDGGFMDNAFQYVQDNGGIDTEECYPYVAQDTECKYKPE 219

Query: 201 NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVN 260
               +I+ +  +P  DE AL   +ATVGPI+V I+++  +F+ Y SG+Y +  C+S  ++
Sbjct: 220 CSGANITGFVDIPSMDERALMEAVATVGPISVGIDSANPSFKFYQSGVYYEPDCSSSQLD 279

Query: 261 HAMLLVGYTR----NSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           H +L+VGY        WI+KN W   WGDNGY+ + K  +N CGIA  A Y  +
Sbjct: 280 HGVLVVGYGSIGKDEYWIVKNSWGEAWGDNGYILMAKDKDNHCGIATEASYPKV 333


>gi|390476660|ref|XP_003735160.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin K [Callithrix jacchus]
          Length = 329

 Score =  227 bits (578), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 175/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    ++SR   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPTSYSRSNDTLYIPDWEGRA---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 265 YDESCNSDNLNHAVLAVGYGILKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|403302736|ref|XP_003942009.1| PREDICTED: cathepsin K isoform 2 [Saimiri boliviensis boliviensis]
          Length = 383

 Score =  227 bits (578), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 120/305 (39%), Positives = 178/305 (58%), Gaps = 20/305 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H + L  NHL D+     +++
Sbjct: 84  KKTHRKQYTSKVDEISRRLIWEKNLKYISIHNLEASLGVHTFELAMNHLGDMTSEEVVQK 143

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFS 126
           MT L   ++  +  RS   N+++ IPD        +D+R+KG++TP  NQ  CG+C+AFS
Sbjct: 144 MTGL---KVPTSFSRS---NDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFS 197

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ Y
Sbjct: 198 SVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAY 255

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G++  C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y+ 
Sbjct: 256 PYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSK 315

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           G+Y DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIA
Sbjct: 316 GVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIA 375

Query: 302 NYAVY 306
           N A +
Sbjct: 376 NLASF 380


>gi|440906717|gb|ELR56946.1| Cathepsin K [Bos grunniens mutus]
          Length = 338

 Score =  226 bits (577), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 172/305 (56%), Gaps = 20/305 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y+K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 39  KKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 98

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFS 126
           MT L      +       SN+++ IPD        +D+R+KG++TP  NQ  CG+C+AFS
Sbjct: 99  MTGL------KVPASRSRSNDTLYIPDWEGRAPDSIDYRKKGYVTPVKNQGQCGSCWAFS 152

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ Y
Sbjct: 153 SVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAY 210

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y  
Sbjct: 211 PYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRK 270

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           G+Y DE C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIA
Sbjct: 271 GVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIA 330

Query: 302 NYAVY 306
           N A +
Sbjct: 331 NLASF 335


>gi|392333757|ref|XP_003752991.1| PREDICTED: cathepsin M-like [Rattus norvegicus]
          Length = 333

 Score =  226 bits (577), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 118/303 (38%), Positives = 177/303 (58%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY+K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + K M 
Sbjct: 35  KYEKTYSLE-EEGQKRAVWEQNMKKIKLHNGENGLGKHGFTMEMNAFGDMTIEEFRKLMI 93

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++    S +  ++V +P+ ++WR++G++TP   Q  C AC+AFS+A AI+GQ+
Sbjct: 94  EIPIPTVKKE--NSVQKRQAVNVPNFINWRKRGYVTPVRRQGRCNACWAFSVAGAIEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDCS   GNLGC  G+    L YV+  GGL  E  YPY+GK+  C
Sbjct: 152 FRKTGQLIPLSVQNLVDCSRTQGNLGCYLGNTYFALQYVKENGGLESEATYPYEGKEGSC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N    I+    + P++EHAL   +AT+GPI+V+I+A   +F  Y +GIY +  C 
Sbjct: 212 RYHPDNSTASIAGIEFV-PKNEHALMNAVATLGPISVAIDARHESFLFYRNGIYHEPNCN 270

Query: 256 SDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
           S  V H+MLLVGY         R  WI+KN   + WG+ GYM + K   N CGIA YA+Y
Sbjct: 271 SSVVTHSMLLVGYGFVGEESDGRKYWIVKNSMGNKWGNRGYMKIAKXQGNHCGIATYALY 330

Query: 307 ALI 309
             +
Sbjct: 331 PRV 333


>gi|159792912|gb|ABW98676.1| cathepsin L [Apostichopus japonicus]
          Length = 332

 Score =  226 bits (577), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 175/302 (57%), Gaps = 7/302 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ + K Y K+  D+++K+ W+ N +K+  HN E   GLH YTL  N  +DL    +++ 
Sbjct: 32  KQTHSKQYTKEEEDNRRKI-WEDNLQKVSKHNTEHSLGLHSYTLGMNKYADLRGEEFVQM 90

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           M  L     R        S      PD +DWR++G++TP  +Q  CG+C+AFS   +++G
Sbjct: 91  MNGLKFDASRERQGIKFLSYAKFQAPDSVDWRDEGYVTPVKDQGQCGSCWAFSTTGSLEG 150

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q F+ST  +  LS Q +VDCSI  GN GC GG +     Y++   G+  E+ YPY+ +  
Sbjct: 151 QHFRSTGVLTSLSEQNLVDCSISYGNNGCEGGLMDYAFQYIKDNLGIDTEDKYPYEAEDD 210

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+F   N+    S +  +   DE ALK   A  GPI+V+I+AS  +FQLY SG+YD+E+
Sbjct: 211 TCRFSPDNVGATDSGYVDVDSGDEDALKEACAANGPISVAIDASHESFQLYESGVYDEES 270

Query: 254 CTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
           C+S  ++H +L+VGY  +S     WI+KN W   WG  GY+++ R  +N+CGIA  A Y 
Sbjct: 271 CSSIELDHGVLVVGYGTDSVGGDYWIVKNSWGLSWGQEGYIWMSRNKDNQCGIATSASYP 330

Query: 308 LI 309
            +
Sbjct: 331 TV 332


>gi|109940312|sp|Q5E968.2|CATK_BOVIN RecName: Full=Cathepsin K; Flags: Precursor
          Length = 329

 Score =  226 bits (577), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 172/305 (56%), Gaps = 20/305 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y+K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFS 126
           MT L      +       SN+++ IPD        +D+R+KG++TP  NQ  CG+C+AFS
Sbjct: 90  MTGL------KVPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFS 143

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ Y
Sbjct: 144 SVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAY 201

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y  
Sbjct: 202 PYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRK 261

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           G+Y DE C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIA
Sbjct: 262 GVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIA 321

Query: 302 NYAVY 306
           N A +
Sbjct: 322 NLASF 326


>gi|77735825|ref|NP_001029607.1| cathepsin K precursor [Bos taurus]
 gi|59858469|gb|AAX09069.1| cathepsin K preproprotein [Bos taurus]
 gi|83638771|gb|AAI09854.1| Cathepsin K [Bos taurus]
 gi|296489554|tpg|DAA31667.1| TPA: cathepsin K [Bos taurus]
          Length = 334

 Score =  226 bits (577), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 172/305 (56%), Gaps = 20/305 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y+K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 35  KKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 94

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFS 126
           MT L      +       SN+++ IPD        +D+R+KG++TP  NQ  CG+C+AFS
Sbjct: 95  MTGL------KVPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFS 148

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ Y
Sbjct: 149 SVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAY 206

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y  
Sbjct: 207 PYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRK 266

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           G+Y DE C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIA
Sbjct: 267 GVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIA 326

Query: 302 NYAVY 306
           N A +
Sbjct: 327 NLASF 331


>gi|308321226|gb|ADO27765.1| cathepsin S [Ictalurus furcatus]
          Length = 329

 Score =  226 bits (576), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 120/304 (39%), Positives = 179/304 (58%), Gaps = 12/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K Y  +  +  ++  W+ N + I  HN EA  G+H Y L  NH+ D+  R  I +
Sbjct: 30  KKNHSKTYTSELEELGRREIWERNLRLITVHNLEASLGMHTYDLGMNHMGDM-TREEILQ 88

Query: 74  MTRLTHSRIRRTLVR--SP-ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           M     +R+R  L R  SP  ++  + +PD +DWREKG++T   NQ  CG+C+AFS A A
Sbjct: 89  M--FAGTRVRPNLTRRSSPFVASAGISVPDSVDWREKGYVTEVKNQGSCGSCWAFSAAGA 146

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+ ++T +++ LS Q +VDCS   GN GC GG +     YV   GG+  +E YPY  
Sbjct: 147 LEGQLKRTTGQVKSLSPQNLVDCSSKYGNKGCNGGFMTQAFQYVIDDGGIDSDEAYPYTA 206

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C++ +     + SS++ +   DE ALK  +AT+GPI+V+I+A+   F LY SG+Y 
Sbjct: 207 MDGQCRYDQSQRAANCSSYNYVSEGDEEALKQAVATIGPISVAIDATRPMFILYHSGVYS 266

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D  CT + VNH +L+VGY      + W++KN W   +GD GY+ + R   N CGIANYA 
Sbjct: 267 DPTCTQN-VNHGVLVVGYGSLNGEDYWLVKNSWGTRFGDGGYIRIARNKGNMCGIANYAC 325

Query: 306 YALI 309
           Y L+
Sbjct: 326 YPLM 329


>gi|410968296|ref|XP_003990643.1| PREDICTED: cathepsin K [Felis catus]
          Length = 330

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/305 (40%), Positives = 172/305 (56%), Gaps = 20/305 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 31  KKTYGKQYNNKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 90

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFS 126
           MT L     R        SN+++ IPD        +D+R+KG++TP  NQ  CG+C+AFS
Sbjct: 91  MTGLKVPPSRS------RSNDTLYIPDWESRAPDSIDYRKKGYVTPVKNQGQCGSCWAFS 144

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ Y
Sbjct: 145 SVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAY 202

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y+ 
Sbjct: 203 PYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSK 262

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           G+Y DE C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIA
Sbjct: 263 GVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIA 322

Query: 302 NYAVY 306
           N A +
Sbjct: 323 NLASF 327


>gi|392354126|ref|XP_573974.4| PREDICTED: cathepsin M-like [Rattus norvegicus]
          Length = 333

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 118/303 (38%), Positives = 177/303 (58%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY+K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + K M 
Sbjct: 35  KYEKTYSLE-EEGQKRAVWEQNMKKIKLHNGENGLGKHGFTMEMNAFGDMTIEEFRKLMI 93

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++    S +  ++V +P+ ++WR++G++TP   Q  C AC+AFS+A AI+GQ+
Sbjct: 94  EIPIPTVKKE--NSVQKRQAVNVPNFINWRKRGYVTPVRRQGRCNACWAFSVAGAIEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDCS   GNLGC  G+    L YV+  GGL  E  YPY+GK+  C
Sbjct: 152 FRKTGQLIPLSVQNLVDCSRTQGNLGCYLGNTYFALQYVKENGGLESEATYPYEGKEGSC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N    I+    + P++EHAL   +AT+GPI+V+I+A   +F  Y +GIY +  C 
Sbjct: 212 RYHPDNSTASIAGIEFV-PKNEHALMNAVATLGPISVAIDARHESFLFYRNGIYHEPNCN 270

Query: 256 SDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
           S  V H+MLLVGY         R  WI+KN   + WG+ GYM + K   N CGIA YA+Y
Sbjct: 271 SSVVTHSMLLVGYGFVGEESDGRKYWIVKNSMGNKWGNRGYMKIAKDQGNHCGIATYALY 330

Query: 307 ALI 309
             +
Sbjct: 331 PRV 333


>gi|118140100|gb|ABK63481.1| cathepsin S [Channa argus]
          Length = 335

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 176/302 (58%), Gaps = 10/302 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K Y+ +  D+ ++  W+ N K I  HN EA  G+H Y L  N + DL     +K 
Sbjct: 38  KKTHNKMYQNEVEDAHRRELWEKNLKFISMHNLEASMGIHTYELGMNQMGDLTQEEILKT 97

Query: 74  MTRLTHSRIRRTLVRSPESNES-VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
              L   R    + R+P + +S V  P  +DWR+ G +T   NQ  CG+C+AFS   A++
Sbjct: 98  YATL---RPPTDVHRTPFTRKSGVAAPGAMDWRDLGCVTSVKNQGSCGSCWAFSAVGALE 154

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+ K+T ++ +LS Q +VDCS   GN GC GG + N   YV    G+  E  YPY G +
Sbjct: 155 GQLAKTTGKLVDLSPQNLVDCSGKYGNHGCDGGFMTNAFQYVIENQGIESEASYPYIGLE 214

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C +       + S +  LP +DE ALK  +AT+GPI+V+I+AS  TF  Y+SG+YDD 
Sbjct: 215 QQCHYNPEESAANCSQYHFLPEKDEEALKEAIATIGPISVAIDASKPTFTFYSSGVYDDP 274

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            C S+ +NH +L VGY    T++SW++KN W  ++GD+GY+ + R   N+CGIA Y  Y 
Sbjct: 275 TC-SEVINHGVLAVGYGTQSTQDSWLVKNSWGTYFGDSGYIRMSRNKGNQCGIALYGCYP 333

Query: 308 LI 309
           LI
Sbjct: 334 LI 335


>gi|426216528|ref|XP_004002514.1| PREDICTED: cathepsin K [Ovis aries]
          Length = 330

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 172/305 (56%), Gaps = 20/305 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y+K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 31  KKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQK 90

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFS 126
           MT L      +       SN+++ IPD        +D+R+KG++TP  NQ  CG+C+AFS
Sbjct: 91  MTGL------KVPASRSRSNDTLYIPDWEGRTPDSVDYRKKGYVTPVKNQGQCGSCWAFS 144

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ Y
Sbjct: 145 SVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAY 202

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y  
Sbjct: 203 PYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRK 262

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           G+Y DE C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIA
Sbjct: 263 GVYYDENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIA 322

Query: 302 NYAVY 306
           N A +
Sbjct: 323 NLASF 327


>gi|403302734|ref|XP_003942008.1| PREDICTED: cathepsin K isoform 1 [Saimiri boliviensis boliviensis]
          Length = 329

 Score =  226 bits (575), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/305 (39%), Positives = 178/305 (58%), Gaps = 20/305 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  +  ++L W+ N K I  HN EA  G+H + L  NHL D+     +++
Sbjct: 30  KKTHRKQYTSKVDEISRRLIWEKNLKYISIHNLEASLGVHTFELAMNHLGDMTSEEVVQK 89

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFS 126
           MT L   ++  +  RS   N+++ IPD        +D+R+KG++TP  NQ  CG+C+AFS
Sbjct: 90  MTGL---KVPTSFSRS---NDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFS 143

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ Y
Sbjct: 144 SVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAY 201

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G++  C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y+ 
Sbjct: 202 PYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSK 261

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           G+Y DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIA
Sbjct: 262 GVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIA 321

Query: 302 NYAVY 306
           N A +
Sbjct: 322 NLASF 326


>gi|348531519|ref|XP_003453256.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  226 bits (575), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 177/306 (57%), Gaps = 15/306 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K++K Y  ++ ++ +K  W +N K +  HN  A QGL  Y L   H +D+    Y + ++
Sbjct: 32  KFEKSYDSESDEAHRKQVWLNNRKFVLMHNILADQGLKSYRLGMTHFADMDNEEYKQLVS 91

Query: 76  RLTHSRIRRTLVRSPESNESVL-------IPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           +        +L   PE   + L       +PD +DWR+KG++T   +Q+ CG+C+AFS  
Sbjct: 92  QGCLHTFNASL---PERGSAFLGLPEGTALPDTVDWRDKGYVTEVKDQKQCGSCWAFSTT 148

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
             ++GQ F+ T ++  LS QQ++DCS   GN GC GGS++  L Y+Q  GG+  E  YPY
Sbjct: 149 GVLEGQHFRKTGKLVSLSEQQLMDCSHSFGNNGCNGGSVKRALQYIQANGGIDTETSYPY 208

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           K K   C++K   I    + +  + P +E  LK  +AT+GPI+V I+AS H+FQ Y SG+
Sbjct: 209 KAKGQRCRYKPDGIGAKCTGYVHVKPSNEETLKKAVATLGPISVGIDASRHSFQFYQSGV 268

Query: 249 YDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           YDD  C+   ++H  L VGY T N    W++KN W   WGD GY+ + R  +N+CGIA+ 
Sbjct: 269 YDDPDCSKTVLDHGALAVGYGTENGHDYWLIKNSWGLRWGDKGYIKMSRNKSNQCGIASE 328

Query: 304 AVYALI 309
           A Y L+
Sbjct: 329 ASYPLV 334


>gi|348586441|ref|XP_003478977.1| PREDICTED: cathepsin K-like [Cavia porcellus]
          Length = 329

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 173/302 (57%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y+K Y  K  +  +++ W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTYRKQYNGKVDEISRRIIWEKNLKYISIHNLEASLGVHTYELSMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HS    TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPPSHSHSNDTLYIPDWEGRA---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQENRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G++  C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQEESCMYNPTGKAAKCRGYREIPVGNEKALKRAVARVGPVSVAIDASLSSFQFYSKGVY 264

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C  + +NHA+L VGY        WILKN W  +WG+ GY+ L R  NN CGIAN A
Sbjct: 265 YDESCNGEDLNHALLAVGYGMQRGNKHWILKNSWGENWGNKGYVLLARNKNNACGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|441593109|ref|XP_003260582.2| PREDICTED: cathepsin L2 isoform 1 [Nomascus leucogenys]
          Length = 334

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 169/287 (58%), Gaps = 13/287 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + + R+  V R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSRPQGNQGCNGGFMGKAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           ++V+PP  E AL   +ATVGPI+V+++A   +FQ Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 225 FTVVPPGKEKALMKAVATVGPISVAMDAGHSSFQFYNQGIYFEPDCSSENLDHGVLVVGY 284

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
                 + NS  W++KN W   WG NGY+ + K  NN CGIA  A Y
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASY 331


>gi|334332714|ref|XP_001367224.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 335

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/296 (39%), Positives = 172/296 (58%), Gaps = 18/296 (6%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM----TRLTHSRI 82
           DS ++  W+ N K I  HNQE   G H + LR N   D+    + + M    +  +  R 
Sbjct: 45  DSWRRATWEKNLKMIERHNQEYSAGKHSFQLRMNKFGDMSTEEFKQVMNGYKSNGSQKRT 104

Query: 83  RRTLVRSPESNESVL--IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTS 140
           + +L R     ES+L  +P+ +DWREKG++TP   Q  C +C+AFS A AI+GQ F+ T 
Sbjct: 105 KGSLYR-----ESLLAQLPESVDWREKGYVTPVKEQRGCYSCWAFSAAGAIEGQWFRKTG 159

Query: 141 EIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRP 200
           ++  LS+Q +VDCSI  GN GC GG + N   YVQ  GG+  EE YPY  + + CK++  
Sbjct: 160 KLVSLSVQNLVDCSIPEGNNGCDGGLMGNAFQYVQDNGGIDTEECYPYVAQDNECKYQPE 219

Query: 201 NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVN 260
               +++ +  +P  DE AL   +A VGPI+V+I+A   +F+ Y SG+Y D  C+S  +N
Sbjct: 220 CSGANVTGFVKIPSTDERALMKAVANVGPISVAIDAGNPSFKFYQSGVYYDPQCSSSQLN 279

Query: 261 HAMLLVGY------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           H +L+VGY       R  WI+KN W  +WGDNGY+ + K  +N CGI   A Y ++
Sbjct: 280 HGVLVVGYGSEGKNGRKYWIVKNSWGENWGDNGYVLMAKDEDNHCGIITDASYPIV 335


>gi|334324659|ref|XP_001371004.2| PREDICTED: cathepsin K-like [Monodelphis domestica]
          Length = 332

 Score =  225 bits (573), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 173/302 (57%), Gaps = 20/302 (6%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           Y+K+Y  K  +  ++L W+ N K I THN E   GLH + L  NHL D+     +++MT 
Sbjct: 36  YRKEYNSKVDEISRRLIWEKNLKYISTHNLEFSLGLHTFELAMNHLGDMTSEEVVQKMTG 95

Query: 77  LTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFSIAS 129
           L     +  L RS ++N+++  PD        +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 96  L-----KVPLSRS-QNNDTLYFPDWETKTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVG 149

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 150 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYI 207

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C +           +  +P   E ALK  +A VGP+AV+I+AS  +FQ Y+ G+Y
Sbjct: 208 GEDESCMYNPTGKAAKCRGYREIPEGSEKALKRAVARVGPVAVAIDASLSSFQFYSKGVY 267

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE C SD +NHA+L VGY        WI+KN W   WG+ GY+ + R  NN CGIAN A
Sbjct: 268 YDENCNSDNLNHAVLAVGYGIQRGTKHWIIKNSWGEQWGNKGYILMARNKNNACGIANLA 327

Query: 305 VY 306
            +
Sbjct: 328 SF 329


>gi|351694420|gb|EHA97338.1| Cathepsin K [Heterocephalus glaber]
          Length = 329

 Score =  224 bits (572), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 171/302 (56%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y+K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 30  KKTYQKQYNGKVDELSRRLIWEKNLKYISIHNLEASLGVHTYELSMNHLGDMTNEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L     HS    TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPPAHSHSNDTLYIPDWEGRA---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQQNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C +           +  +P  +E ALK  +A VGPI+V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQDESCMYNPTGKAAKCRGYREVPVGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C  D +NHA+L VGY        WILKN W  +WG+ GY+ L R  NN CGIAN A
Sbjct: 265 YDESCDGDNLNHAVLAVGYGIQRGHKHWILKNSWGENWGNKGYVLLARNKNNTCGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|344275468|ref|XP_003409534.1| PREDICTED: cathepsin K-like [Loxodonta africana]
          Length = 329

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 171/302 (56%), Gaps = 14/302 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y  K  +  ++L W+ N K I  HN EA  G H Y L  NHL D+     +++
Sbjct: 30  KKTYGKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGAHTYELAMNHLGDMTSEEVVQK 89

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    + SR   TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 90  MTGLKVPPSDSRNNDTLYIPDWEGRA---PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVG 146

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 147 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 204

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 205 GQDESCMYNPTGKAAKCRGYREIPVGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 264

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            DE+C SD +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A
Sbjct: 265 YDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 324

Query: 305 VY 306
            +
Sbjct: 325 SF 326


>gi|348531515|ref|XP_003453254.1| PREDICTED: cathepsin L2-like [Oreochromis niloticus]
          Length = 333

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 179/306 (58%), Gaps = 16/306 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+KK Y   + ++ +K  W +N K +  HN  A QGL  + L   + +D+  + Y K ++
Sbjct: 32  KFKKSYDSPSEETHRKQVWLNNRKLVLIHNALADQGLKSFHLGMTYFADMENQEYKKLIS 91

Query: 76  R-----LTHSRIRR--TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           +        S  RR  T  R P+  +   +P  +DWR++G++T   +Q++CG+C+AFS  
Sbjct: 92  QGCLGSFNASLHRRGSTFNRLPKGTK---LPKTVDWRKQGYVTKVKHQKECGSCWAFSAT 148

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++GQ F+ T ++  LS QQ+VDCS   GN GC GG +     Y+++ GGL  E+ YPY
Sbjct: 149 GALEGQHFRKTRKLVSLSEQQLVDCSRSFGNHGCNGGWMNPAFQYIRYNGGLDTEDSYPY 208

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           K K  IC +  PN V  I S  V    DE ALK  +AT+GPI+++++AS  +FQLY SG+
Sbjct: 209 KAKDGICHY-NPNSVGAICSGHVDVSPDEAALKQAVATIGPISIAVDASHESFQLYQSGV 267

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           YD+  C   +V HAML+VGY        W++KN W   WGD GY+ + R   N+CGIA  
Sbjct: 268 YDEHRCNKKHVTHAMLVVGYGTEGGHDYWLIKNSWGLQWGDKGYIKMTRNKGNQCGIATA 327

Query: 304 AVYALI 309
           A Y L+
Sbjct: 328 ASYPLV 333


>gi|426362423|ref|XP_004048364.1| PREDICTED: cathepsin L2 isoform 1 [Gorilla gorilla gorilla]
 gi|426362425|ref|XP_004048365.1| PREDICTED: cathepsin L2 isoform 2 [Gorilla gorilla gorilla]
          Length = 334

 Score =  224 bits (570), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 168/287 (58%), Gaps = 13/287 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + + R+  V R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           ++V+ P  E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 225 FTVVAPGKEKALMKAVATVGPISVAVDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 284

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
                 + NS  W++KN W   WG NGY+ + K  NN CGIA  A Y
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASY 331


>gi|114625736|ref|XP_001153919.1| PREDICTED: cathepsin L2 isoform 2 [Pan troglodytes]
 gi|114625742|ref|XP_520130.2| PREDICTED: cathepsin L2 isoform 5 [Pan troglodytes]
          Length = 334

 Score =  223 bits (569), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 168/287 (58%), Gaps = 13/287 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + + R+  V R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           ++V+ P  E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 225 FTVVTPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 284

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
                 + NS  W++KN W   WG NGY+ + K  NN CGIA  A Y
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASY 331


>gi|161408095|dbj|BAF94151.1| cathepsin L-like cysteine protease 1 [Plautia stali]
          Length = 344

 Score =  223 bits (569), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 111/310 (35%), Positives = 178/310 (57%), Gaps = 12/310 (3%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   + +Y+KDY   + +  +K  ++ N K +  HN+  ++G   Y +  NHL+D+HPR 
Sbjct: 23  FTRFKSQYRKDYPSDSVERYRKKVYKQNEKFVREHNERYERGEVTYKMALNHLADMHPRE 82

Query: 70  YIKEMTRLTHSRIRRTLVRSPES-----NESVLIPDHLDWREKGFITPDWNQEDCGACYA 124
           ++   T L  +R  R   + PE      N+  +I   +DWR+KG I+P  +Q  CG+C+A
Sbjct: 83  FM--ATFLGFNRSLRATNKVPEGIPFRHNKDAVIQKEVDWRQKGAISPVKDQGHCGSCWA 140

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           FS   A++   F        LS Q ++DCS+  GN GC GG +     YV+   G+  EE
Sbjct: 141 FSSTGALEAHTFLKKGRRVSLSEQNLIDCSLNYGNNGCEGGLMEQAFQYVRDNDGIDTEE 200

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY+G+ S C+FK+ N+    + +  +P  DE AL   +AT GP++++I+AS  +FQ Y
Sbjct: 201 AYPYEGEDSECRFKKNNVGATDAGFVTIPSGDEQALMEAVATQGPLSIAIDASNPSFQFY 260

Query: 245 ASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCG 299
           + G+Y +  C+S  ++H +LLVGY     +  W++KN WS  WG+NGY+ + R  +N CG
Sbjct: 261 SEGVYYEPECSSAQLDHGVLLVGYGVEKDQKYWLVKNSWSEQWGENGYIKMARNKDNNCG 320

Query: 300 IANYAVYALI 309
           IA  A + ++
Sbjct: 321 IATQASFPIV 330


>gi|23110960|ref|NP_001324.2| cathepsin L2 preproprotein [Homo sapiens]
 gi|320118898|ref|NP_001188504.1| cathepsin L2 preproprotein [Homo sapiens]
 gi|12644075|sp|O60911.2|CATL2_HUMAN RecName: Full=Cathepsin L2; AltName: Full=Cathepsin U; AltName:
           Full=Cathepsin V; Flags: Precursor
 gi|3107915|dbj|BAA25909.1| cathepsin V [Homo sapiens]
 gi|3228672|gb|AAC23598.1| cathepsin U [Homo sapiens]
 gi|3869129|dbj|BAA34365.1| cathepsin L2 [Homo sapiens]
 gi|23958123|gb|AAH23504.1| CTSL2 protein [Homo sapiens]
 gi|37182404|gb|AAQ89004.1| cathepsin L2 [Homo sapiens]
 gi|83405150|gb|AAI10513.1| Cathepsin L2 [Homo sapiens]
 gi|119579235|gb|EAW58831.1| cathepsin L2, isoform CRA_a [Homo sapiens]
 gi|119579236|gb|EAW58832.1| cathepsin L2, isoform CRA_a [Homo sapiens]
          Length = 334

 Score =  223 bits (568), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 168/287 (58%), Gaps = 13/287 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + + R+  V R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           ++V+ P  E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 225 FTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 284

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
                 + NS  W++KN W   WG NGY+ + K  NN CGIA  A Y
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASY 331


>gi|402898110|ref|XP_003912074.1| PREDICTED: cathepsin L2 [Papio anubis]
          Length = 334

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 112/290 (38%), Positives = 167/290 (57%), Gaps = 13/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVR 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + ++R+  L R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQVMGCFRNQKLRKGKLFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG + +   YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSRPQGNQGCNGGFMNSAFRYVKENGGLDSEESYPYVAMDGICKYRPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           + V+P   E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 225 FEVVPAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 284

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       W++KN W   WG NGY+ + K  +N CGIA  A Y  +
Sbjct: 285 GFEGANSDNNKYWLVKNSWGPEWGSNGYVKIAKDKDNHCGIATAASYPTV 334


>gi|348545637|ref|XP_003460286.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 179/303 (59%), Gaps = 9/303 (2%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K++K Y   + ++ +K  W SN K +  HN    QGL  Y L   + +++    Y + ++
Sbjct: 32  KFEKSYDSPSEEAHRKQIWLSNRKLVLMHNILTDQGLKSYRLGMTYFANMENEEYKQLVS 91

Query: 76  RLTHSRIRRTLVRSPES----NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +        +L R   +     E   +P+ +DWR+KG++T   +Q+ CG+C+AFS   A+
Sbjct: 92  QGCLGSFNGSLSRRGSTFAQLPEGTALPNTVDWRDKGYVTEVKDQKQCGSCWAFSATGAL 151

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F+ T  +  LS QQ+VDCS   GN GC GG +     Y+++  G+  EE YPY+ K
Sbjct: 152 EGQHFRKTGTLVSLSEQQLVDCSSNFGNSGCMGGWMDFAFKYIKYNRGIDTEEFYPYEAK 211

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
             +C++KR +I    S + ++   +E ALK  +ATVGPI+V+I+AS  +FQLY SG+Y D
Sbjct: 212 NGLCRYKRDSIGATCSGYIIVKRFEEQALKEAVATVGPISVTIDASRPSFQLYESGVYYD 271

Query: 252 EACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           + C S ++NHA+L VGY T N    W++KN W   WG+ GY+ + R   N+CGIA+ A Y
Sbjct: 272 DGCGSIFLNHAVLAVGYGTENGHDYWLVKNSWGLGWGEKGYIRMSRNKKNQCGIASVARY 331

Query: 307 ALI 309
            L+
Sbjct: 332 PLV 334


>gi|109112413|ref|XP_001106814.1| PREDICTED: cathepsin L2 isoform 3 [Macaca mulatta]
 gi|297271422|ref|XP_002800251.1| PREDICTED: cathepsin L2 [Macaca mulatta]
          Length = 334

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 112/290 (38%), Positives = 167/290 (57%), Gaps = 13/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVR 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + ++R+  L R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQVMGCFRNQKLRKGKLFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG + +   YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSHPQGNQGCNGGFMNSAFRYVKENGGLDSEESYPYVAMDGICKYRSENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           + V+P   E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 225 FKVVPAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 284

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       W++KN W   WG NGY+ + K  +N CGIA  A Y  +
Sbjct: 285 GFEGANSDNNKYWLVKNSWGPEWGSNGYVKIAKDKDNHCGIATAASYPTV 334


>gi|229366214|gb|ACQ58087.1| Cathepsin L precursor [Anoplopoma fimbria]
          Length = 334

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 178/303 (58%), Gaps = 9/303 (2%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           ++ + Y   A ++++K  W SN + +  HN  A QG+  Y L   + +D+    Y ++++
Sbjct: 32  QFGRSYNSPAEEAQRKEIWLSNRRLVLVHNIMADQGIKSYRLGMTYFADMENEEYKRQIS 91

Query: 76  RLTHSRIRRTLVRSPES----NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +        +L R   +     E   +P+ +DWREKG++T   +Q+ CG+C+AFS   ++
Sbjct: 92  QGCLGSFNASLPRRGSAYLRLPEGADLPNSVDWREKGYVTDVKDQKQCGSCWAFSTTGSL 151

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F+ T ++  LS QQ+VDCS   GN GC GG + +   Y+Q  GG+  E+ YPY+ +
Sbjct: 152 EGQTFRKTGKLVSLSEQQLVDCSGDYGNEGCMGGLMDSAFRYIQANGGIDTEDSYPYEAE 211

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   NI    + +  +   DE ALK  LAT+GP++V+I+AS  +FQLY SG+YD+
Sbjct: 212 DGQCRYNSANIGATCTGYVDVKQGDEDALKEALATIGPVSVAIDASHSSFQLYESGVYDE 271

Query: 252 EACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             C+S  ++H +L VGY  ++    W++KN W   WG+ GY+ + R  +N+CGIA  + Y
Sbjct: 272 PECSSSELDHGVLAVGYGSDNGHDYWLVKNSWGLGWGNKGYIMMTRNKHNQCGIATASSY 331

Query: 307 ALI 309
            L+
Sbjct: 332 PLV 334


>gi|3087790|emb|CAA75029.1| cathepsin L2 [Homo sapiens]
          Length = 334

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 168/287 (58%), Gaps = 13/287 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + + R+  V R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFPDMTNEEFRQMMGCFRNQKFRKGKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           ++V+ P  E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 225 FTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 284

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
                 + NS  W++KN W   WG NGY+ + K  NN CGIA  A Y
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASY 331


>gi|47086859|ref|NP_997749.1| cathepsin L, 1 a precursor [Danio rerio]
 gi|42542930|gb|AAH66490.1| Cathepsin L1, a [Danio rerio]
          Length = 337

 Score =  222 bits (566), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 116/293 (39%), Positives = 167/293 (56%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR---TL 86
           +++ W+ N KKI  HN E   G+H Y L  NH  D+    + + M    H + RR   +L
Sbjct: 48  RRVIWEKNLKKIEMHNLEHSMGIHTYRLGMNHFGDMTHEEFRQVMNGFKHKKDRRFRGSL 107

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E   +P+ LDWREKG++TP  +Q +CG+C+AFS   A++GQ+F+ T ++  LS
Sbjct: 108 FMEPNFIE---VPNKLDWREKGYVTPVKDQGECGSCWAFSTTGALEGQMFRKTGKLVSLS 164

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     YV+   GL  EE YPY G     C F   N   +
Sbjct: 165 EQNLVDCSRPEGNEGCNGGLMDQAFQYVKDQNGLDSEESYPYLGTDDQPCHFDPKNSAAN 224

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L 
Sbjct: 225 DTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLA 284

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS +WGD GY+Y+ K  +N CGIA  A Y L+
Sbjct: 285 VGYGFEGEDVDGKKYWIVKNSWSENWGDKGYIYMAKDRHNHCGIATAASYPLV 337


>gi|50539796|ref|NP_001002368.1| cathepsin L.1 precursor [Danio rerio]
 gi|49900360|gb|AAH75887.1| Cathepsin L.1 [Danio rerio]
          Length = 334

 Score =  222 bits (566), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 174/303 (57%), Gaps = 9/303 (2%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ K YR    +S ++L W +N K +  HN  A QGL  Y L   + +D+    Y + + 
Sbjct: 32  KFGKSYRSAEEESHRQLTWLTNRKLVLVHNMMADQGLKSYRLGMTYFADMSNEEYRQLVF 91

Query: 76  RLTHSRIRRTLVRSPES----NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           R     +  T  R   +     ++ ++PD +DWR+KG++T   +Q+ CG+C+AFS   ++
Sbjct: 92  RGCLGSMNNTKARGGSTFFRLRKAAVVPDTVDWRDKGYVTDIKDQKQCGSCWAFSATGSL 151

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F+ T ++  LS QQ+VDCS   GN GC GG +     Y++   GL  E+ YPY+ +
Sbjct: 152 EGQTFRKTGKLVSLSEQQLVDCSGSYGNYGCDGGLMDQAFQYIEANKGLDTEDSYPYEAQ 211

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C+F    +    + +  +   DE AL+  +AT+GPI+V+I+A   +FQLY+SG+Y++
Sbjct: 212 DGECRFNPSTVGASCTGYVDIASGDESALQEAVATIGPISVAIDAGHSSFQLYSSGVYNE 271

Query: 252 EACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             C+S  ++H +L VGY  ++    WI+KN W   WG  GY+ + R  +N+CGIA  A Y
Sbjct: 272 PDCSSSELDHGVLAVGYGSSNGDDYWIVKNSWGLDWGVQGYILMSRNKSNQCGIATAASY 331

Query: 307 ALI 309
            L+
Sbjct: 332 PLV 334


>gi|395535911|ref|XP_003769964.1| PREDICTED: cathepsin K [Sarcophilus harrisii]
          Length = 332

 Score =  222 bits (566), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/305 (39%), Positives = 173/305 (56%), Gaps = 20/305 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ Y K+Y  K  +  ++L W+ N K I THN E   GLH + L  NHL D+     +++
Sbjct: 33  KQSYGKEYNSKVDEISRRLIWEKNLKYISTHNLEFSLGLHTFELAMNHLGDMTSEEVVQK 92

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFS 126
           MT L     +  L RS ++N+++ IPD        +D+R+KG++TP  NQ  CG+C+AFS
Sbjct: 93  MTGL-----KMPLSRS-QNNDTLYIPDWEGRTPESVDYRKKGYVTPVKNQGQCGSCWAFS 146

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ Y
Sbjct: 147 SVGALEGQLKKKTGKLLNLSPQNLVDC--VSKNDGCGGGYMTNAFQYVQENRGIDSEDAY 204

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   C +           +  +P   E ALK  +A VGP+AV+I+AS  +FQ Y+ 
Sbjct: 205 PYIGQDESCMYNPTGKAAKCRGYREIPEGSEKALKRAVARVGPVAVAIDASLSSFQFYSK 264

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           G+Y DE C  D +NHA+L VGY        WI+KN W   WG+ GY+ + R   N CGIA
Sbjct: 265 GVYYDENCNGDNLNHAVLAVGYGIQRGTKHWIIKNSWGEEWGNKGYILMARNKKNACGIA 324

Query: 302 NYAVY 306
           N A +
Sbjct: 325 NLASF 329


>gi|309380130|gb|ADO65978.1| cathepsin L [Eriocheir sinensis]
 gi|309380134|gb|ADO65980.1| cathepsin L [Eriocheir sinensis]
          Length = 325

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/303 (36%), Positives = 176/303 (58%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + +Y K YR    DS ++  ++ N + I++HN++ + GL  +TL  N   D+        
Sbjct: 26  KARYGKQYRSTKEDSYRQSVYEQNQEFINSHNEQYENGLVSFTLAMNQFGDMTTEEINAA 85

Query: 74  MTRLTHS--RIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           M     +  ++ R  +  P  +E   +PD +DWR+KG +TP  +Q+ CG+C+AFS   ++
Sbjct: 86  MNGFLSAGKKVPRGTMYQPLVDE---LPDTVDWRDKGAVTPVKDQKACGSCWAFSATGSL 142

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F ST ++  LS Q +VDCS   GN GC GG + N   Y++   G+  EE YPY+ K
Sbjct: 143 EGQHFLSTGKLVSLSEQNLVDCSDKYGNFGCGGGLMDNAFRYIKDNNGIDTEESYPYEAK 202

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C+F   N+   +SS+  +    E  L+  +A  GP++V+I+AS  TF  Y+ GIY D
Sbjct: 203 NGPCRFNSDNVGATLSSYVDIQHGSEDDLQKAVAEKGPVSVAIDASTSTFHFYSRGIYYD 262

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           E C+S +++H +L VGY    + + W++KN W+  WGD+GY+ + R  NN CGIA+ A Y
Sbjct: 263 EKCSSSFLDHGVLAVGYGTDDSSDYWLVKNSWNETWGDSGYIKMSRNRNNNCGIASQASY 322

Query: 307 ALI 309
            ++
Sbjct: 323 PVV 325


>gi|444522624|gb|ELV13407.1| Cathepsin L1 [Tupaia chinensis]
          Length = 307

 Score =  221 bits (564), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 173/307 (56%), Gaps = 20/307 (6%)

Query: 12  FPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           F Q K K  +R+          W+ N K IH HN E  Q  H +T+  N   D+    + 
Sbjct: 12  FNQDKNKDVWRRSV--------WEKNLKMIHQHNLEHSQQKHSFTMEMNAFGDMTNEEFR 63

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           K M      + +R      +    + +P+ +DWREKG++TP  NQ DCG+C+AFS   A+
Sbjct: 64  KVMNGF--RKQKRKTGNLFQEFMHLDVPESVDWREKGYVTPVKNQGDCGSCWAFSSTGAL 121

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+F+ T ++  LS Q +VDCSI  GN GC GG + N   YV+  GGL  EE YPY+  
Sbjct: 122 EGQMFRKTGKLVSLSEQNLVDCSISEGNFGCNGGIMDNAFLYVKDNGGLDSEESYPYEAV 181

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              CK+   N   + + +  LP + E AL+  +ATVGPI+V I+AS  +FQ Y  GIY +
Sbjct: 182 DDSCKYNPKNSAANDTGFVHLPVE-EKALEKAVATVGPISVGIDASADSFQFYKEGIYFE 240

Query: 252 EACTSDYVNHAMLLVGY-------TRNS-WILKNWWSHHWGDNGY-MYLKRGNNRCGIAN 302
             C+S  ++HA+L+VGY       T N  W++KN W  +WG +GY M  K  NN CGIA+
Sbjct: 241 PNCSSVELDHAVLVVGYGVMEEASTNNKFWLVKNSWGKNWGMDGYIMMAKDRNNNCGIAS 300

Query: 303 YAVYALI 309
           YA+Y  +
Sbjct: 301 YAMYPTV 307


>gi|391332597|ref|XP_003740719.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  221 bits (564), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 177/303 (58%), Gaps = 9/303 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           ++++ K Y +K  D  ++  +++N KKI+ HN     G   Y L  N  +D+ P  + K 
Sbjct: 30  KRQHNKTYLQK-QDVGRRAIFEANIKKINAHNLLYDLGRSSYRLGLNGFADMTPDEFEKY 88

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
             TR   +  R + ++  + N S+ +PD +DWR +G++TP  NQ  CG+C+AFS   A++
Sbjct: 89  RGTRFEANEARVSKLQHRD-NRSMHVPDTVDWRTEGYVTPVKNQGVCGSCWAFSTTGALE 147

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F+ + ++  LS Q +VDCS + GN GC GG + N   +++ AGGL  E+ YPY GK 
Sbjct: 148 GQHFRRSGDLVSLSEQMLVDCSAVYGNAGCNGGLMDNAFRFIKDAGGLETEKSYPYTGKD 207

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C F    I   ++ +  +P +DE ALK     VGP++V+I+AS   FQ Y  G+YD+ 
Sbjct: 208 GTCHFDARGIGAKLTGFVDVPSRDEEALKEAAGVVGPVSVAIDASGQNFQFYKDGVYDEI 267

Query: 253 ACTSDYVNHAMLLVGY--TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            C+S  ++H +L+VGY  TR+    W++KN W   WG +GY+ + R   N+CGIA  A Y
Sbjct: 268 TCSSTSLDHGVLVVGYGTTRDGKDYWLVKNSWGSSWGQSGYIQMSRNKENQCGIATMASY 327

Query: 307 ALI 309
             +
Sbjct: 328 PTV 330


>gi|384941728|gb|AFI34469.1| cathepsin L2 preproprotein [Macaca mulatta]
          Length = 334

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 166/290 (57%), Gaps = 13/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVR 88
           ++  W+ N K I  HN E  QG HG+ +  N   D+    + + M    + ++R+  L R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFAMAMNAFGDMTNEEFRQVMGCFRNQKLRKGKLFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG + +   YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSRPQGNQGCNGGFMNSAFRYVKENGGLDSEESYPYVAMDGICKYRSENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           + V+P   E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 225 FEVVPAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 284

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       W++KN W   WG NGY+ + K  +N CGIA  A Y  +
Sbjct: 285 GFEGANSDNNKYWLVKNSWGPEWGSNGYVKIAKDKDNHCGIATAASYPTV 334


>gi|297684914|ref|XP_002820054.1| PREDICTED: cathepsin L2 isoform 2 [Pongo abelii]
          Length = 334

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 168/287 (58%), Gaps = 13/287 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + + R+  V R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSHPQGNQGCNGGFMDKAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           ++V+ P  E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 225 FTVILPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 284

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
                 + NS  W++KN W   WG NGY+ + K  NN CGIA  A Y
Sbjct: 285 GFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASY 331


>gi|229367042|gb|ACQ58501.1| Cathepsin L precursor [Anoplopoma fimbria]
          Length = 334

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 178/303 (58%), Gaps = 9/303 (2%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           ++ + Y   A ++++K  W SN + +  HN  A QG+  Y L   + +D+    Y ++++
Sbjct: 32  QFGRSYNSPAEEAQRKEIWLSNRRLVLVHNIMADQGIKSYRLGMTYFADMENEEYKRQIS 91

Query: 76  RLTHSRIRRTLVRSPES----NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +        +L R   +     E   +P+ +DWREKG++T   +Q+ CG+C+AFS   ++
Sbjct: 92  QGCLGSFNASLPRRGSAYLRLPEGADLPNSVDWREKGYVTEVKDQKQCGSCWAFSTTGSL 151

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F+ T ++  LS QQ+VDCS   GN GC GG + +   Y+Q  GG+  E+ YPY+ +
Sbjct: 152 EGQTFRKTGKLVSLSEQQLVDCSGDYGNEGCMGGLMDSAFRYIQANGGIDTEDSYPYEAE 211

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   NI    + +  +   DE ALK  +AT+GP++V+I+AS  +FQLY SG+YD+
Sbjct: 212 DGQCRYNSANIGATCTGYVDVKQGDEDALKEAVATIGPVSVAIDASHSSFQLYESGVYDE 271

Query: 252 EACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             C+S  ++H +L VGY  ++    W++KN W   WG+ GY+ + R  +N+CGIA  + Y
Sbjct: 272 PECSSSELDHGVLAVGYGSDNGHDYWLVKNSWGLGWGNKGYIMMTRNKHNQCGIATASSY 331

Query: 307 ALI 309
            L+
Sbjct: 332 PLV 334


>gi|390457768|ref|XP_002742793.2| PREDICTED: cathepsin L2 [Callithrix jacchus]
          Length = 588

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 113/290 (38%), Positives = 170/290 (58%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIR-RTLVR 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + + + R + R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQVMVCFRNQKHKNRKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 GPLL---LNLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG + N   YV+  GGL  E  YPY  K   CK+K  N V + + 
Sbjct: 165 NLVDCSHPQGNQGCNGGFMNNAFQYVKENGGLDSEASYPYVAKDGSCKYKPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           + V+P  ++  +K  +ATVGPI+V+++AS  +FQ Y SGIY ++ C+S  ++H +L+VGY
Sbjct: 225 FVVIPAHEKELMKA-VATVGPISVAVDASHSSFQFYKSGIYFEQDCSSKNLDHGVLVVGY 283

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                     N W++KN W   WG NGY+ + K  NN CGIA  A Y ++
Sbjct: 284 GFEGTNSNNNNYWLIKNSWGPEWGSNGYIKIAKDRNNHCGIATAASYPIV 333


>gi|397499865|ref|XP_003820654.1| PREDICTED: cathepsin L2 isoform 1 [Pan paniscus]
 gi|397499867|ref|XP_003820655.1| PREDICTED: cathepsin L2 isoform 2 [Pan paniscus]
          Length = 334

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 167/287 (58%), Gaps = 13/287 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + + R+  V R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           ++V+ P  E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 225 FTVVTPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 284

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
                 + NS  W++KN W   WG NGY+ + K   N CGIA  A Y
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKKNHCGIATAASY 331


>gi|149039728|gb|EDL93844.1| rCG24133 [Rattus norvegicus]
          Length = 333

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 117/303 (38%), Positives = 176/303 (58%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY+K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + K M 
Sbjct: 35  KYEKTYSLE-EEGQKRAVWEENMKKIKLHNGENGLGKHGFTMEMNAFGDMTIEEFRKLMI 93

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++    S +  ++V +P+ ++WR++G++TP   Q  C  C+AFS+A AI+GQ+
Sbjct: 94  EIPIPTVKKE--NSVQKRQAVNVPNFINWRKRGYVTPVRRQGRCNVCWAFSVAGAIEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDCS   GNLGC  G+    L YV+  GGL  E  YPY+ K+  C
Sbjct: 152 FQKTGQLIPLSVQNLVDCSRPQGNLGCYLGNTYLALQYVKENGGLESEATYPYEEKEGSC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N    I+ +  + P++E AL   +AT+GPI+V+I+A   +F  Y +GIY +  C+
Sbjct: 212 RYHPDNSTASITDFEFV-PKNEDALMNAVATLGPISVAIDARHESFLFYRNGIYHEPNCS 270

Query: 256 SDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
           S  V HAMLLVGY         R  WILKN   + WG+ GYM + K   N CGIA YA+Y
Sbjct: 271 SSVVTHAMLLVGYGFVGEESDGRKYWILKNSMGNKWGNRGYMKIAKDQGNHCGIATYALY 330

Query: 307 ALI 309
             +
Sbjct: 331 PRV 333


>gi|297684916|ref|XP_002820055.1| PREDICTED: cathepsin L2 isoform 3 [Pongo abelii]
          Length = 345

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 168/287 (58%), Gaps = 13/287 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + + R+  V R
Sbjct: 59  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFR 118

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 119 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 175

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 176 NLVDCSHPQGNQGCNGGFMDKAFQYVKENGGLDSEESYPYVAMDEICKYRPENSVANDTG 235

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           ++V+ P  E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 236 FTVILPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 295

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
                 + NS  W++KN W   WG NGY+ + K  NN CGIA  A Y
Sbjct: 296 GFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASY 342


>gi|213514640|ref|NP_001134963.1| Cathepsin S precursor [Salmo salar]
 gi|209155506|gb|ACI33985.1| Cathepsin S precursor [Salmo salar]
 gi|209737594|gb|ACI69666.1| Cathepsin S precursor [Salmo salar]
 gi|223647278|gb|ACN10397.1| Cathepsin S precursor [Salmo salar]
 gi|223673157|gb|ACN12760.1| Cathepsin S precursor [Salmo salar]
          Length = 330

 Score =  221 bits (562), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 115/304 (37%), Positives = 172/304 (56%), Gaps = 12/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K+Y+ +  +  ++  W+ N + I+ HN EA   +H Y L  NH+ D+      + 
Sbjct: 31  KKTHGKNYQTEVEELGRREVWERNLQLINLHNLEASMDMHTYDLGMNHMGDMTQEEIAQS 90

Query: 74  MTRLTHSRIRRTLVRSPES---NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
              L   R+   L R P +   +    IPD  DWREKG++T    Q  CG+C+AFS   A
Sbjct: 91  FASL---RVPADLKREPSAFVGSSGAPIPDTFDWREKGYVTEVKMQGSCGSCWAFSAVGA 147

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+ K+T ++ ++S Q +VDCS   GN GC GG +     YV    G+  ++ YPYKG
Sbjct: 148 LEGQLMKTTGKLIDISSQNLVDCSSKYGNKGCNGGFMSQAFQYVIDNQGIDSDQSYPYKG 207

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
            Q  C +       + S +S LP  DE  LK  LAT+GPI+V+I+A+   F  Y SG+Y+
Sbjct: 208 VQQQCSYNPAQRAANCSKYSFLPEGDEGVLKEALATIGPISVAIDATRPLFTFYRSGVYN 267

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D  CT   +NHA+L VGY     ++ W++KN WS  WGD GY+ + R  +N+CGIA Y  
Sbjct: 268 DPTCTKK-INHAVLAVGYGTLGGQDYWLVKNSWSLSWGDQGYIRMSRNKDNQCGIALYGC 326

Query: 306 YALI 309
           Y ++
Sbjct: 327 YPVM 330


>gi|37905511|gb|AAO64477.1| cathepsin S precursor [Fundulus heteroclitus]
          Length = 337

 Score =  221 bits (562), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 119/304 (39%), Positives = 172/304 (56%), Gaps = 12/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K+Y+ +  +  ++  W+ N   I THN EA  G H Y L  N + DL     ++ 
Sbjct: 38  KKTHGKEYQNEEENVHRRDLWEKNLMLITTHNLEASMGFHTYDLSMNFMGDLSQEEILQF 97

Query: 74  MTRLTHSRIRRTLVRSPES---NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
            T LT       L R+P S        +PD LD REKG +T    Q  CG+C+AFS A A
Sbjct: 98  YTTLT---TPTDLQRAPSSFVGASGADVPDTLDLREKGLVTAVRMQGACGSCWAFSAAGA 154

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+ K T +++ LS Q +VDCS   GN GC GG +     YV    G+  E+ YPY+G
Sbjct: 155 LEGQLAKKTGKLQNLSPQNLVDCSTKYGNHGCNGGFMHKAFQYVIDNQGIDSEDSYPYRG 214

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C++       + S +  LP  DE ALK  +AT+GPI+V+I+A    F  Y SG+YD
Sbjct: 215 RDQQCQYNPATRAANCSRYDFLPEGDEQALKEAIATIGPISVAIDARRPRFAFYRSGVYD 274

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D +CT + VNHA+L VGY     ++ W++KN W   +GD GY+ + R  N++CGIA YA 
Sbjct: 275 DSSCTQN-VNHAVLAVGYGSLGGQDYWLVKNSWGTSFGDQGYIRMARNKNDQCGIALYAC 333

Query: 306 YALI 309
           Y ++
Sbjct: 334 YPIM 337


>gi|261289783|ref|XP_002611753.1| hypothetical protein BRAFLDRAFT_236364 [Branchiostoma floridae]
 gi|229297125|gb|EEN67763.1| hypothetical protein BRAFLDRAFT_236364 [Branchiostoma floridae]
          Length = 307

 Score =  221 bits (562), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 109/292 (37%), Positives = 177/292 (60%), Gaps = 9/292 (3%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR---LTHSRIR 83
           +S++   +++N K I+ HN EA  G+H Y L  N  + +    ++  +     L  +  +
Sbjct: 16  ESRRMEIFENNTKLINLHNNEADLGMHTYWLGHNQFAHMTNDEFVANVIGGCLLDRNASK 75

Query: 84  RTLVRSPESNESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
            T  R  + + +++ +PD +DWR KG++TP  NQE CG+C+AFS   +++GQ FK T ++
Sbjct: 76  STADRVHQYDSNLVELPDTVDWRTKGYVTPVKNQEQCGSCWAFSTTGSLEGQTFKKTGKL 135

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI 202
             LS Q +VDCS   GN GC GG + +   Y++  GG+  E+ YPY+ +   C+FK  ++
Sbjct: 136 VSLSEQNLVDCSGEFGNQGCNGGLMDDAFKYIKANGGIDTEDSYPYEARDGKCRFKPADV 195

Query: 203 VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHA 262
              ++ ++ +   DE AL   +ATVGPI+V+I+AS HTFQ+Y+ G+Y +  C+S  ++H 
Sbjct: 196 GATVTGYTDISEGDEGALTQAVATVGPISVAIDASHHTFQMYSHGVYYEPQCSSTELDHG 255

Query: 263 MLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           +L VGY     ++ W++KN W   WG NGY+ + R  NN+CGIA  A Y L+
Sbjct: 256 VLAVGYGTEGGKDYWLVKNSWGEVWGQNGYIMMSRNKNNQCGIATSASYPLV 307


>gi|67678376|gb|AAH96862.1| Cathepsin S, b.2 [Danio rerio]
          Length = 330

 Score =  221 bits (562), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 116/303 (38%), Positives = 176/303 (58%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +KK+ K Y  +  +  ++  W+ N + I  HN EA  G+H Y L  NH++D+     ++ 
Sbjct: 31  KKKHVKLYSCEDEEVGRRELWERNLELIAIHNLEASMGMHSYDLAINHMADMTTEEILQT 90

Query: 74  M--TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +  TR+     R T      S+   ++PD LDWR+KG++T   NQ  CG+C+AFS   A+
Sbjct: 91  LAVTRVPPGFKRPT--AEYVSSSFAVVPDTLDWRDKGYVTSVKNQGACGSCWAFSSVGAL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+ K+T ++ +LS Q +VDCS   GNLGC GG +     YV   GG+  E  YPY+G 
Sbjct: 149 EGQLMKTTGKLVDLSPQNLVDCSSKYGNLGCNGGYMSQAFQYVIDNGGIDSESSYPYQGT 208

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           Q  C++       + +S+  +   DE ALK  LA +GP++V+I+A+   F  Y SG+YDD
Sbjct: 209 QGSCRYDPSQRAANCTSYKFVSQGDEQALKEALANIGPVSVAIDATRPQFIFYRSGVYDD 268

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT   VNH +L VGY     ++ W++KN W   +GD GY+ + R  NN CGIA+ A Y
Sbjct: 269 PSCTQK-VNHGVLAVGYGTLSGQDYWLVKNSWGAGFGDGGYIRIARNKNNMCGIASEACY 327

Query: 307 ALI 309
            ++
Sbjct: 328 PIV 330


>gi|62955291|ref|NP_001017661.1| cathepsin S, b.2 precursor [Danio rerio]
 gi|62204682|gb|AAH93339.1| Cathepsin S, b.2 [Danio rerio]
 gi|182891354|gb|AAI64362.1| Ctssb.2 protein [Danio rerio]
          Length = 330

 Score =  221 bits (562), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 116/303 (38%), Positives = 176/303 (58%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +KK+ K Y  +  +  ++  W+ N + I  HN EA  G+H Y L  NH++D+     ++ 
Sbjct: 31  KKKHVKLYSCEDEEVGRRELWERNLELIAIHNLEASMGMHSYDLAINHMADMTTEEILQT 90

Query: 74  M--TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +  TR+     R T      S+   ++PD LDWR+KG++T   NQ  CG+C+AFS   A+
Sbjct: 91  LAVTRVPPGFKRPT--AEYVSSSFAVVPDTLDWRDKGYVTSVKNQGACGSCWAFSSVGAL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+ K+T ++ +LS Q +VDCS   GNLGC GG +     YV   GG+  E  YPY+G 
Sbjct: 149 EGQLMKTTGKLVDLSPQNLVDCSSKYGNLGCNGGYMSQAFQYVIDNGGIDSESSYPYQGT 208

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           Q  C++       + +S+  +   DE ALK  LA +GP++V+I+A+   F  Y SG+YDD
Sbjct: 209 QGSCRYDPSQRAANCTSYKFVSQGDEQALKEALANIGPVSVAIDATRPQFIFYRSGVYDD 268

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT   VNH +L VGY     ++ W++KN W   +GD GY+ + R  NN CGIA+ A Y
Sbjct: 269 PSCTQK-VNHGVLAVGYGTLSGQDYWLVKNSWGAGFGDGGYIRIARNKNNMCGIASEACY 327

Query: 307 ALI 309
            ++
Sbjct: 328 PIV 330


>gi|6630974|gb|AAF19631.1|AF194427_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 112/303 (36%), Positives = 173/303 (57%), Gaps = 8/303 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY--I 71
           + KY K Y  +  +  +K  W+SN + +  HN  A QG   Y L  N  +DL+   +  +
Sbjct: 23  KGKYGKSYLGRGEEVLRKRVWESNLQIVQQHNVLADQGQANYRLGMNTYADLYNEEFMAL 82

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           K    L  ++ + +  ++ +    V +P  +DWR +G++TP  +Q  CG+C+ FS   ++
Sbjct: 83  KGSGGLLQAKDKSS-TQTFKPLVGVTLPSSVDWRNQGYVTPVKDQGQCGSCWTFSATGSL 141

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F  T  +  LS QQ+VDC+   GN GC GG + +  +Y++  GG+  E  YPY  +
Sbjct: 142 EGQHFAKTGNLLSLSEQQLVDCAGRYGNYGCNGGLMESAYDYIKGVGGVELESAYPYTAR 201

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              CKF R  +V     + V+P  DE AL   + T+GP+AVSI+AS ++FQLY SG+YD 
Sbjct: 202 DGRCKFDRSKVVATCKGYVVIPVGDEQALMQAVGTIGPVAVSIDASGYSFQLYESGVYDF 261

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
             C+S  ++H +L VGY     +N W++KN W   WGD GY+ + K  NN+CGIA  + Y
Sbjct: 262 RRCSSTNLDHGVLAVGYGTEGGQNYWLVKNSWGPGWGDQGYIKMSKDKNNQCGIATDSCY 321

Query: 307 ALI 309
            L+
Sbjct: 322 PLV 324


>gi|355567966|gb|EHH24307.1| Cathepsin L2 [Macaca mulatta]
 gi|355753494|gb|EHH57540.1| Cathepsin L2 [Macaca fascicularis]
 gi|380790509|gb|AFE67130.1| cathepsin L2 preproprotein [Macaca mulatta]
          Length = 334

 Score =  220 bits (561), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 166/290 (57%), Gaps = 13/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVR 88
           ++  W+ N K I  HN E  QG HG+ +  N   D+    + + M    + ++R+  L R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFAMAMNAFGDMTNEEFRQVMGCFRNQKLRKGKLFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG + +   YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSHPQGNQGCNGGFMNSAFRYVKENGGLDSEESYPYVAMDGICKYRPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           + V+P   E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 225 FEVVPAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 284

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       W++KN W   WG NGY+ + K  +N CGIA  A Y  +
Sbjct: 285 GFEGANSDNNKYWLVKNSWGPEWGSNGYVKIAKDKDNHCGIATAASYPTV 334


>gi|432936690|ref|XP_004082231.1| PREDICTED: cathepsin L-like [Oryzias latipes]
          Length = 334

 Score =  220 bits (561), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 179/306 (58%), Gaps = 15/306 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ + Y     +++++  W +N K +  HN  A QG+  Y L   + +D+    Y + ++
Sbjct: 32  KFGRTYSSPTEEAQRRQTWLNNRKLVLVHNILADQGIKSYRLGMTYFADMENEEYKRLIS 91

Query: 76  R-----LTHSRIRR--TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           +        S  RR  T  R PE+ +   +P  +DWR+KG++T   +Q+ CG+C+AFS  
Sbjct: 92  QGCLGSFNASLPRRGSTFFRLPENKD---LPAAVDWRDKGYVTDVKDQKQCGSCWAFSAT 148

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            +++GQ F+ T ++  LS QQ+VDCS   GN+GC GG + +   Y+Q  GG+  EE YPY
Sbjct: 149 GSLEGQTFRKTGKLVSLSEQQLVDCSGDYGNMGCGGGLMDDAFRYIQATGGIDTEESYPY 208

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           + +   C++K   +    + +  +   DE AL+  +AT+GPI+V I+AS  +FQLY SG+
Sbjct: 209 EAEDGECRYKPDAVGATCTGYVDVSSGDEDALQEAVATIGPISVGIDASHISFQLYESGL 268

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANY 303
           YD+  C+S  ++H +L VGY     ++ W++KN W   WGD GY+ + K  +N+CGIA  
Sbjct: 269 YDEPQCSSSELDHGVLAVGYGSENGQDYWLVKNSWGLTWGDQGYIKMSKNKSNQCGIATA 328

Query: 304 AVYALI 309
           A Y L+
Sbjct: 329 ASYPLV 334


>gi|342305192|dbj|BAK55650.1| cathepsin S [Oplegnathus fasciatus]
          Length = 337

 Score =  220 bits (561), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 117/303 (38%), Positives = 176/303 (58%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ ++K Y+ +  D +++  W+ N   I  HN EA  GLH Y L  NH+ DL     ++ 
Sbjct: 38  KRTHEKKYQNEGEDVRRRELWEKNLMLITMHNLEASMGLHTYELSMNHMGDLTQEEILQS 97

Query: 74  MTRLTH-SRIRRTLVRSPESNES-VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
              L+  + I+R    SP +  S   +PD +DWREKG +T    Q  CG+C+AFS A A+
Sbjct: 98  FATLSPPTDIQR--APSPFAGTSGAAVPDTVDWREKGCVTSVKMQGSCGSCWAFSAAGAL 155

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+ K+T ++ +LS Q +VDCS   GN GC GG +     YV    G+  +  YPY G+
Sbjct: 156 EGQLAKTTGKLLDLSPQNLVDCSSKYGNHGCNGGFMHRAFQYVIDNQGIDSDASYPYTGQ 215

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C +       + S +S LP  DE ALK  LAT+GPI+V+I+A+  +F  Y SG+YDD
Sbjct: 216 SQQCHYNPAYRAANCSRYSFLPEGDEGALKEALATIGPISVAIDATRPSFTFYRSGVYDD 275

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           + CT + VNH +L VGY     ++ W++KN W   +GD G++ + R  N++CGIA Y  Y
Sbjct: 276 QTCTRN-VNHGVLAVGYGTLNGKDYWLVKNSWGSTFGDKGFIRMARNKNDQCGIALYGCY 334

Query: 307 ALI 309
            ++
Sbjct: 335 PIM 337


>gi|31077116|ref|NP_852043.1| cathepsin M precursor [Rattus norvegicus]
 gi|27960485|gb|AAO27846.1|AF456462_1 cathepsin M [Rattus norvegicus]
          Length = 333

 Score =  220 bits (560), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 117/303 (38%), Positives = 175/303 (57%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY+K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + K M 
Sbjct: 35  KYEKTYSLE-EEGQKRAVWEQNMKKIKLHNGENGLGKHGFTMEMNAFGDMTIEEFRKLMI 93

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++    S +  ++V +P+ ++WR++G++TP   Q  C  C+AFS+A AI+GQ+
Sbjct: 94  EIPIPTVKKE--NSVQKRQAVNVPNFINWRKRGYVTPVRRQGRCNVCWAFSVAGAIEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDCS   GNLGC  G+    L YV+  GGL  E  YPY+ K+  C
Sbjct: 152 FQKTGQLIPLSVQNLVDCSRPQGNLGCYLGNTYLALQYVKENGGLESEATYPYEEKEGSC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N    I+ +  + P++E AL   +AT+GPI V+I+A   +F  Y +GIY +  C+
Sbjct: 212 RYHPDNSTASITDFEFV-PKNEDALMNAVATLGPIFVAIDARHESFLFYRNGIYHEPNCS 270

Query: 256 SDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
           S  V HAMLLVGY         R  WILKN   + WG+ GYM + K   N CGIA YA+Y
Sbjct: 271 SSVVTHAMLLVGYGFVGEESDGRKYWILKNSMGNKWGNRGYMKIAKDQGNHCGIATYALY 330

Query: 307 ALI 309
             +
Sbjct: 331 PRV 333


>gi|348546019|ref|XP_003460476.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
 gi|348546143|ref|XP_003460538.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  220 bits (560), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 112/306 (36%), Positives = 177/306 (57%), Gaps = 15/306 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+++ Y   + ++ ++  W +N K +  HN  A QGL  Y L   + +D+    Y + ++
Sbjct: 32  KFERSYHSPSEEAHRRQIWLNNRKFVLVHNILADQGLKSYRLGMTYFADMENEEYKRVIS 91

Query: 76  R-----LTHSRIRR--TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           +        S  RR  T  R PE  +   +PD +DWR+KG++T   +Q+ CG+C+AFS  
Sbjct: 92  QGCLHSFNASLPRRGSTFFRLPEGTD---LPDAVDWRDKGYVTDVKDQKQCGSCWAFSAT 148

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            +++GQ F+ T  +  LS QQ+VDCS   GN+GC GG +     Y+Q  GG+  EE YPY
Sbjct: 149 GSLEGQHFRKTGTLVSLSEQQLVDCSGDYGNMGCMGGLMDYAFQYIQANGGIDTEESYPY 208

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           + +   C++   NI    + ++ +   DE ALK  +AT+GPI+V I+AS  +FQ Y SG+
Sbjct: 209 EAENGKCRYNPDNIGATSTGYTEVSQGDEDALKEAVATIGPISVGIDASQMSFQFYESGV 268

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           Y++  C+S  ++H +L VGY      + W++KN W   WGD GY+ + R  +N+CGIA  
Sbjct: 269 YNEPDCSSLELDHGVLAVGYGTEDGNDYWLVKNSWGLEWGDKGYIKMSRNKSNQCGIATA 328

Query: 304 AVYALI 309
           A Y L+
Sbjct: 329 ASYPLV 334


>gi|301612003|ref|XP_002935514.1| PREDICTED: cathepsin K-like [Xenopus (Silurana) tropicalis]
          Length = 331

 Score =  220 bits (560), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 165/299 (55%), Gaps = 8/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           Y K Y  K  +  ++L W+ N   I +HN E  QGLH Y L  N   D+     ++ MT 
Sbjct: 35  YHKHYDNKIHELMRRLIWEKNLNIIRSHNLEFTQGLHTYELGMNKFGDMTSEEVVRMMTG 94

Query: 77  L-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           L  H+ +  T + S E   S  IP+ +D+R+KG++TP  +Q +CG+C+AFS   A++GQ+
Sbjct: 95  LKVHTGMGPTNLTSDEDEASQRIPNSIDYRKKGYVTPIRDQGECGSCWAFSTVGALEGQL 154

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
            K T ++  +S Q +VDC  +  N GC GG +     YV+   G+  EE YPY G    C
Sbjct: 155 MKKTGKLVGISPQNLVDC--VKDNFGCGGGYMTTAFKYVKKNKGIDSEEAYPYVGMDQKC 212

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           K+       +I  +  +    E ALK  +  VGPI+V I+A   TF LY  GIY D++C 
Sbjct: 213 KYNVSGRAAEIKGFKEVKKGSETALKKAVGLVGPISVGIDAGLDTFFLYKKGIYYDKSCD 272

Query: 256 SDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
            D +NHA+L VGY +      WI+KN W   WG+ GY+ + R   N CGIAN A Y ++
Sbjct: 273 GDSINHAVLAVGYGKQKKGKYWIIKNSWGEDWGNKGYILMAREKGNACGIANLASYPVM 331


>gi|410904751|ref|XP_003965855.1| PREDICTED: cathepsin K-like [Takifugu rubripes]
          Length = 331

 Score =  219 bits (559), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 116/299 (38%), Positives = 168/299 (56%), Gaps = 8/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           ++++Y  +  +  ++  W+ N   I  HNQEA  G+H Y L  NHL D+     +++MT 
Sbjct: 35  HRREYATQGEEEIRRAVWEKNMNVIDAHNQEAALGMHSYELGMNHLGDMTSEEVLEKMTG 94

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L      +  V    SN    +P HLD+R+KG +T   +Q  CG+C+AFS A A++G   
Sbjct: 95  LLVPLNDQRNVTMALSNSIERLPKHLDYRKKGIVTAVKDQGQCGSCWAFSSAGALEGMQA 154

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K T ++ +LS Q +VDC  +  N GC GG + N   YV    G+  E  YPY  ++  C+
Sbjct: 155 KKTGKLVDLSPQNLVDC--VKENDGCGGGYMTNAFRYVATNRGIDSEASYPYVAQEQSCQ 212

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +K      + SS+  +P  +E  L   L   GPIAV I+A+  TFQLY+ G+Y D  C  
Sbjct: 213 YKESGKAAECSSYEEVPQGNEKQLAYALFKHGPIAVGIDATLSTFQLYSKGVYYDPNCNP 272

Query: 257 DYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           + +NHA+LLVGY  NS     WI+KN WS +WG+ GY+ + R   N CGIAN A Y L+
Sbjct: 273 ENINHAVLLVGYGVNSRGQHYWIVKNSWSTNWGNGGYVLMARNRGNLCGIANLASYPLV 331


>gi|213512938|ref|NP_001133871.1| Cathepsin K precursor [Salmo salar]
 gi|209155648|gb|ACI34056.1| Cathepsin K precursor [Salmo salar]
 gi|223647252|gb|ACN10384.1| Cathepsin K precursor [Salmo salar]
 gi|223673129|gb|ACN12746.1| Cathepsin K precursor [Salmo salar]
          Length = 331

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/298 (38%), Positives = 169/298 (56%), Gaps = 10/298 (3%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           ++Y     +  ++  W+ N + I  HN+EA  G+H Y L  NHL D+      +++T L 
Sbjct: 37  REYNGLGEEVIRRTIWEKNMRLIEAHNEEAALGIHSYELGMNHLGDMTSEEIAEKLTGLQ 96

Query: 79  HSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFK 137
               R R+    P++N  V IP  +D+R+KG +TP  NQ  CG+C+AFS A A++GQ+ K
Sbjct: 97  VPMNRDRSNTWIPDNN-VVKIPRSIDYRKKGMVTPVKNQLSCGSCWAFSSAGALEGQLAK 155

Query: 138 STSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKF 197
           +T ++ +LS Q +VDC  ++ N GC GG + N   YV+  GG+  EE YPY G+   C +
Sbjct: 156 TTGKLIDLSPQNLVDC--VTENNGCGGGYMTNAFEYVEENGGIDTEEAYPYLGQDGQCAY 213

Query: 198 KRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSD 257
               +      +  +P  DE AL   +  VGP+AV I+A+  TFQ Y  G+Y D  C  D
Sbjct: 214 NASGMGAQCRGFKEIPEGDEWALTKAVVKVGPVAVGIDATLSTFQFYQRGVYYDPNCNKD 273

Query: 258 YVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
            +NHA+L VGY + +     WI+KN WS  WG  GY+ + R   N CGIAN A Y ++
Sbjct: 274 DINHAVLAVGYGQTAKGMKFWIVKNSWSESWGKQGYIMMARNRGNACGIANLASYPIM 331


>gi|189053498|dbj|BAG35664.1| unnamed protein product [Homo sapiens]
          Length = 334

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 167/287 (58%), Gaps = 13/287 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  QG HG+T+  N   D+    + + M    + + R+  V R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ C +C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLF---LDLPKSVDWRKKGYVTPVKNQKQCVSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV+  GGL  EE YPY     ICK++  N V + + 
Sbjct: 165 NLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           ++V+ P  E AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY
Sbjct: 225 FTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGY 284

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
                 + NS  W++KN W   WG NGY+ + K  NN CGIA  A Y
Sbjct: 285 GFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASY 331


>gi|348531513|ref|XP_003453253.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 333

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 172/303 (56%), Gaps = 10/303 (3%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K++K Y   + ++++K  W SN K +  HN  A  GL  Y L   + +D+    Y K ++
Sbjct: 32  KFEKSYDSPSEETQRKQIWLSNRKLVLKHNALADLGLKSYHLGMTYFADMENEEYKKLIS 91

Query: 76  RLTHSRIRRTLVRSPES----NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +        +L R   +     +  ++PD +DWR+KG++T   NQ+ CG+C+AFS   A+
Sbjct: 92  QGCLGSFNASLPRRGSTFNRLPKGTVLPDTVDWRKKGYVTKVKNQQQCGSCWAFSATGAL 151

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ FK T  +  LS QQ+VDCS   GN GC GG + N   Y++  GG+  E  YPY+  
Sbjct: 152 EGQHFKKTGRLVYLSEQQLVDCSRNFGNRGCDGGWMNNAFKYIKDNGGIQTEASYPYQAM 211

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
             +C +  PN V  I +  V    DE ALK  +AT+GPI+++++AS  +FQLY SG+YD+
Sbjct: 212 DGLCHY-NPNSVGAICNGYVDVSPDEEALKEAVATIGPISIAMDASHESFQLYQSGVYDE 270

Query: 252 EACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
             C   Y++H ML+VGY        W++KN W   WG  GY+ + R   N+CGIA  A Y
Sbjct: 271 HRCNDYYLSHGMLVVGYGTEGGLDYWLIKNSWGLGWGKMGYIKMVRNKRNQCGIATAASY 330

Query: 307 ALI 309
            L+
Sbjct: 331 PLV 333


>gi|326501772|dbj|BAK02675.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 333

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 112/305 (36%), Positives = 180/305 (59%), Gaps = 10/305 (3%)

Query: 15  KKYKKDYRKKATDSK---KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           K +K+   K+ +D++   ++  W+ N +K+  HN +A  G+H Y L  N  +D+    ++
Sbjct: 29  KLWKEANNKRYSDAEEHVRRATWEGNLQKVQEHNLQADLGVHTYWLGMNKYADMTVTEFV 88

Query: 72  KEMTRLTHS-RIRRTLVRSPES-NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           K M     + R +RT  R   S N  + +PD +DWR+KG++T   +Q  CG+C+AFS   
Sbjct: 89  KVMNGYNATMRGQRTQDRHTFSFNSKIALPDTVDWRDKGYVTDVKDQGQCGSCWAFSTTG 148

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ FK T ++  LS Q +VDCS   GN+GC GG +     Y++   G+  E+ YPY+
Sbjct: 149 ALEGQHFKQTGKLVSLSEQNLVDCSGKQGNMGCNGGLMDQAFEYIKENNGIDTEDSYPYE 208

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
              + C+FK  N+    + ++ +  +DE AL+  +ATVGPI+V+I+A   +FQLY  G+Y
Sbjct: 209 AVDNQCRFKAANVGATDTGFTDITSKDESALQQAVATVGPISVAIDAGHTSFQLYKHGVY 268

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYA 304
           ++  C+   ++H +L VGY  +S    W++KN W   WGD GY+ + R   N+CGIA  A
Sbjct: 269 NEPFCSQTRLDHGVLAVGYGTDSGKDYWLVKNSWGEGWGDKGYIKMTRNKRNQCGIATAA 328

Query: 305 VYALI 309
            Y L+
Sbjct: 329 SYPLV 333


>gi|426219875|ref|XP_004004143.1| PREDICTED: cathepsin L1 [Ovis aries]
          Length = 333

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/291 (39%), Positives = 163/291 (56%), Gaps = 16/291 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +K  W+ N K I  HNQE  QG H +++  N   DL    + + M        ++  V  
Sbjct: 48  RKAVWKKNMKMIELHNQEYSQGKHSFSMAMNAFGDLTSEEFRQMMNGFQRQENKKGKVF- 106

Query: 90  PESNESVL--IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
              +E++   IP  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS 
Sbjct: 107 ---HETIFASIPPSVDWREKGYVTPVKNQGKCGSCWAFSTTGALEGQMFRKTGKLVSLSE 163

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDIS 207
           Q +VDCS   GN GC GG + N   YV   GGL  EE YPY G    C +   N   + +
Sbjct: 164 QNLVDCSQPEGNRGCHGGLMDNAFQYVLDVGGLDSEESYPYTGLVGTCNYNPKNSAANET 223

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
            +  LP Q E+AL   +AT+GPI+V+++AS  +FQ Y SGIY +  C S+ V+H +L+VG
Sbjct: 224 GFVDLPKQ-ENALMKAVATLGPISVAVDASNPSFQFYKSGIYYEPKCKSESVDHGVLVVG 282

Query: 268 YTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y            W++KN W  HWG NGY+ + K  NN CGIA  A Y  +
Sbjct: 283 YGFEGADSDDNKYWLVKNSWGKHWGINGYIKMAKDQNNHCGIATMASYPTV 333


>gi|23452059|gb|AAN32912.1| cathepsin [Danio rerio]
          Length = 310

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 114/293 (38%), Positives = 165/293 (56%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR---TL 86
           +++ W+ N K I  HN     G+H Y L  NH  D+    + + M    H + RR   +L
Sbjct: 21  RRIFWKKNLKXIEMHNLXHSMGIHTYRLGMNHFGDMTHEEFRQVMNGFKHKKDRRFRGSL 80

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E   +P+ LDWREKG++TP  +Q +CG+C+AFS   A++GQ+F+ T ++  LS
Sbjct: 81  FMEPXFIE---VPNKLDWREKGYVTPVKDQGECGSCWAFSTTGALEGQMFRKTGKLVSLS 137

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     YV+   GL  EE YPY G     C F   N   +
Sbjct: 138 EQNLVDCSRPEGNEGCNGGLMDQAFQYVKDQNGLDSEESYPYLGTDDQPCHFDPKNSAAN 197

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L 
Sbjct: 198 DTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLA 257

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS +WGD GY+Y+ K  +N CGIA  A Y L+
Sbjct: 258 VGYGFEGEDVDGKKYWIVKNSWSENWGDKGYIYMAKDRHNHCGIATAASYPLV 310


>gi|225706370|gb|ACO09031.1| Cathepsin L precursor [Osmerus mordax]
          Length = 337

 Score =  218 bits (555), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 113/305 (37%), Positives = 172/305 (56%), Gaps = 15/305 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT- 75
           + K+Y+ +  +  +++ W+ N KKI  HN E   G H Y+L  NH  D+    + + M  
Sbjct: 36  HSKNYQHEKEEGWRRMVWEKNLKKIEMHNLEHSLGKHSYSLGMNHFGDMTNEEFRQVMNG 95

Query: 76  -RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            +L   + + +L   P + E+   P  +DWRE+G++TP  +Q  CG+C+AFS   A++GQ
Sbjct: 96  YKLQQRKFKGSLFLEPNNMEA---PKQVDWREEGYVTPVKDQGQCGSCWAFSTTGAMEGQ 152

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQS 193
           +F+ T ++  LS Q +VDCS   GN GC GG +     Y+Q   GL  EE YPY G    
Sbjct: 153 MFRKTQKLVSLSEQNLVDCSRPEGNEGCNGGLMDQAFQYIQDNSGLDSEEAYPYLGTDDQ 212

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C +K      + + +  +P   EHAL   +A+VGP++V+I+A   +FQ Y SGIY ++ 
Sbjct: 213 PCNYKAEFSAANDTGFMDIPSGKEHALMKAIASVGPVSVAIDAGHESFQFYQSGIYYEKE 272

Query: 254 CTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYA 304
           C+S+ ++H +L VGY         +  WI+KN WS  WGD GY+ + K   N CGIA  A
Sbjct: 273 CSSEELDHGVLAVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYILMAKDRKNHCGIATAA 332

Query: 305 VYALI 309
            Y L+
Sbjct: 333 SYPLV 337


>gi|432910512|ref|XP_004078392.1| PREDICTED: cathepsin K-like [Oryzias latipes]
          Length = 331

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 111/299 (37%), Positives = 161/299 (53%), Gaps = 8/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K+Y     +  ++  W+ N + I  HNQEA  G+H YTL  N   D+     ++ MT 
Sbjct: 35  HTKEYITVEEEGIRRAIWEKNLRMIEAHNQEAALGMHTYTLGMNQFGDMTQEEVVERMTG 94

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L         V        + +P  +D+R+KG +T   NQ  CG+C+AFS   A++GQ+ 
Sbjct: 95  LQMPLNPEPRVPMETDGSLIKLPKSVDYRKKGMVTSVKNQGSCGSCWAFSSVGALEGQLA 154

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K T  + +LS Q +VDC  ++ N GC GG + N   YVQ  GG+  E  YPY G+   C+
Sbjct: 155 KKTGNLVDLSPQNLVDC--VTENDGCGGGYMTNAFKYVQENGGIDSEAAYPYMGEDQPCR 212

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +    +   I  +  +P  DEHAL V L   GP++V I+AS ++F  Y  GIY D  C  
Sbjct: 213 YNVSGLAAQIKGYKEVPEGDEHALAVALFKAGPVSVGIDASQNSFLYYQKGIYFDRNCNK 272

Query: 257 DYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           + +NHA+L VGY  N+     WI+KN W   WG+ GY+ + R   N CGIAN A Y ++
Sbjct: 273 EDINHAVLAVGYGVNAKGKKFWIVKNSWGETWGNKGYVLMARNRGNVCGIANLASYPVM 331


>gi|348542776|ref|XP_003458860.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  218 bits (554), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/306 (37%), Positives = 178/306 (58%), Gaps = 15/306 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ K Y   + +S +K  W +N K +  HN  A QG   Y L   + +D+    Y K ++
Sbjct: 32  KFGKSYDSPSEESHRKQIWLTNRKHVLMHNILADQGFKSYRLGMTYFADMENEEYKKLVS 91

Query: 76  R-----LTHSRIRR--TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           R        S  RR  T +R PE    + +PD +DWRE+G++T   +Q+ CG+C+AFS  
Sbjct: 92  RGCLGSFNASLPRRGSTFLRLPEG---IDLPDAVDWREQGYVTGVKDQKQCGSCWAFSAT 148

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++GQ F+ T  +  LS QQ+VDCS   GN GC GG + +   Y++  GG+  E  YPY
Sbjct: 149 GALEGQHFRKTGILVSLSEQQLVDCSGAYGNEGCNGGWMDSAFRYIEANGGIDTEASYPY 208

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           + +  +C++   ++    S +  +   DE ALK  +AT+GP++V+I+AS  +FQ Y SG+
Sbjct: 209 EAEDWLCRYNPASVGATCSGYVDVNKYDEEALKEAVATIGPVSVAIDASHASFQFYTSGV 268

Query: 249 YDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           YD+  C+S  ++H +L VGY T N    W++KN W   WG+ GY+ + R  +N+CGIA+ 
Sbjct: 269 YDEPGCSSIELDHGVLAVGYGTENGHDYWLVKNSWGRGWGEMGYIKMSRNKHNQCGIASA 328

Query: 304 AVYALI 309
           A Y L+
Sbjct: 329 ASYPLV 334


>gi|156371477|ref|XP_001628790.1| predicted protein [Nematostella vectensis]
 gi|156215775|gb|EDO36727.1| predicted protein [Nematostella vectensis]
          Length = 330

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 117/314 (37%), Positives = 176/314 (56%), Gaps = 17/314 (5%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           ++W    +F  KKY     + A    +K  W+ N KKI  HN E     H +TL  NHL 
Sbjct: 26  QQWQAWKLFHTKKYTTVTEEGA----RKAIWRDNLKKIQKHNAEG----HSFTLAMNHLG 77

Query: 64  DLHP---RHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCG 120
           DL     R++   M R  +S   +    +  +   V +PD +DWR++G++TP  NQ  CG
Sbjct: 78  DLTQDEFRYFYTGM-RSHYSNYTKKQGSAFLAPSHVQVPDTVDWRKEGYVTPVKNQGQCG 136

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+AFS   +++GQ FK T ++  LS Q +VDCS   GN GC GG +     Y++  GG+
Sbjct: 137 SCWAFSTTGSLEGQNFKKTGKLVSLSEQNLVDCSTAYGNNGCQGGLMDYAFKYIKENGGI 196

Query: 181 MKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
             EE YPY+ +   C+F++ NI    + +  +   DE ALK    TVGPI+V+I+A   +
Sbjct: 197 DTEESYPYEARNDRCRFQKSNIGAVDTGFVDVTHGDEEALKTAAGTVGPISVAIDAGHMS 256

Query: 241 FQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-N 295
           FQ Y SG+Y++  C+S  ++H +L+VGY      + W++KN W   WG  GY+ + R  N
Sbjct: 257 FQFYHSGVYNNAGCSSTSLDHGVLVVGYGTYQGSDYWLVKNSWGERWGMEGYIMMSRNKN 316

Query: 296 NRCGIANYAVYALI 309
           N+CG+A  A Y L+
Sbjct: 317 NQCGVATQASYPLV 330


>gi|311265493|ref|XP_003130681.1| PREDICTED: cathepsin L1-like [Sus scrofa]
          Length = 332

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 117/305 (38%), Positives = 175/305 (57%), Gaps = 14/305 (4%)

Query: 16  KYKKDYRKK---ATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK 72
           K+K  +RK      + +++  W+ N K I  HN E +QG H +T+  N   D+    + K
Sbjct: 31  KWKATHRKLYGLNEEGRRRAIWEKNMKMIERHNWEHRQGKHSFTMAMNAFGDMTNEEFRK 90

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
            M    + + ++  V       S L P  +DWREKG++T   NQ  CG+C+AFS   A++
Sbjct: 91  TMNGFQNQKHKKGKVFLDAG--SALTPHSVDWREKGYVTAVKNQGHCGSCWAFSATGALE 148

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+F+ TS++  LS Q +VDCS   GN GC GG + N   Y++  GGL  EE YPY GK 
Sbjct: 149 GQMFRKTSKLISLSEQNLVDCSWPEGNEGCNGGLMDNAFQYIKDNGGLDSEESYPYFGKD 208

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             CK+K  +   + + +  +P Q E AL   +ATVGPI+V I+AS  +FQ Y++GIY + 
Sbjct: 209 GSCKYKPQSSAANDTGYVDIPKQ-EKALMKAVATVGPISVGIDASHESFQFYSTGIYFEP 267

Query: 253 ACTSDYVNHAMLLVGY-------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYA 304
            C+S+ ++H +L+VGY           W++KN W + WG +GY+ + K  NN CGIA  A
Sbjct: 268 QCSSEDLDHGVLVVGYGVEGAHSNNKYWLVKNSWGNTWGMDGYIKMTKDQNNHCGIATMA 327

Query: 305 VYALI 309
            Y ++
Sbjct: 328 SYPVV 332


>gi|149510440|ref|XP_001518002.1| PREDICTED: cathepsin K-like [Ornithorhynchus anatinus]
          Length = 618

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 114/301 (37%), Positives = 168/301 (55%), Gaps = 12/301 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y  K  ++ ++L W+ N + I  HN E   G+H + L  NHL D+     ++ 
Sbjct: 319 KKTHQKQYNSKEDETSRRLVWEKNLQYISAHNLEFSLGIHTFELAMNHLGDMTSEEVVRT 378

Query: 74  MTRLTHSRIR---RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           MT L     R      + SP+  E    PD +D+R+KG++TP  NQ  CG+C+AFS   A
Sbjct: 379 MTGLKVPPARTQSNDTLYSPDWAERA--PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGA 436

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+ K T  + +LS Q +VDC  ++ N GC GG + N   YV    G+  E+ YPY G
Sbjct: 437 LEGQLKKKTGRLLDLSPQNLVDC--VASNDGCGGGYMTNAFQYVHDNRGIDSEDAYPYVG 494

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C++           +  +P  DE ALK  +A VGP+AV+I+AS  +FQ Y+ G+Y 
Sbjct: 495 QDEPCRYSPTGKAAKCRGYREVPVGDEKALKRAVARVGPVAVAIDASLSSFQFYSKGVYF 554

Query: 251 DEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           DE C    +NHA+L VGY        WI+KN W   WG+ GY+ + R  NN CGIA+ A 
Sbjct: 555 DENCNGANLNHALLAVGYGAQKGAKHWIIKNSWGEEWGNKGYVLMARNKNNACGIASLAS 614

Query: 306 Y 306
           +
Sbjct: 615 F 615


>gi|318816588|ref|NP_001187996.1| cathepsin L precursor [Ictalurus punctatus]
 gi|308324547|gb|ADO29408.1| cathepsin L [Ictalurus punctatus]
          Length = 334

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 174/303 (57%), Gaps = 9/303 (2%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ K Y+    +S++K  W  N K +  HN  A QG+  Y L   + +D+  + Y + + 
Sbjct: 32  KFGKIYKSVEEESQRKNTWLENRKLVLVHNMLADQGIKSYRLGMTYFADMDNQEYRQSVF 91

Query: 76  RLTHSRIRRTLVRSPES----NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +       RT      +        ++PD +DWR+KG++    +Q++CG+C+AFS   ++
Sbjct: 92  KGCLGSFNRTKGHRASTFLLQAGGAVLPDTVDWRDKGYVAEVKDQKNCGSCWAFSATGSL 151

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F+ T ++  LS QQ+VDCS   GN+GC GG +     Y++   G+  EE YPY+  
Sbjct: 152 EGQTFRKTGKLVSLSEQQLVDCSGKYGNMGCGGGLMDLAFEYIEDNKGIDTEESYPYEAT 211

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C+FK   +    + +  +  +DE+AL+  +A +GPI+V+I+A   +FQLY SGIY++
Sbjct: 212 DGDCRFKPATVGATCTGYVDINSEDENALQKAVANIGPISVAIDAGHISFQLYGSGIYNE 271

Query: 252 EACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             C+S+ ++H +L VGY  ++    W++KN W   WGD GY+ + R  NN+CGIA  A Y
Sbjct: 272 PNCSSEDLDHGVLAVGYGTDNQQDYWLVKNSWGLDWGDQGYIKMTRNKNNQCGIATAASY 331

Query: 307 ALI 309
            L+
Sbjct: 332 PLV 334


>gi|71897043|ref|NP_001026516.1| cathepsin S precursor [Gallus gallus]
 gi|53126701|emb|CAG30977.1| hypothetical protein RCJMB04_1f23 [Gallus gallus]
          Length = 328

 Score =  217 bits (552), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 114/301 (37%), Positives = 168/301 (55%), Gaps = 9/301 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K+YR +A + +++  W+ N + +  HN E   GLH Y L  NH+ D+        
Sbjct: 32  KKAHGKEYRHQAEEGQRRATWEKNLRLVMLHNLEHSLGLHSYQLGMNHMGDMTSEDVAAL 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           +T L   R+     ++         PD +DWREKG +T   NQ  CGAC+AFS   A++ 
Sbjct: 92  LTGL---RVPYGHNQTSTYRRRGGAPDAMDWREKGCVTEVKNQGACGACWAFSAVGALEA 148

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+   T ++  LS Q +VDCS++ GN GC GG +     Y+    G+  EE YPY  +  
Sbjct: 149 QVKLKTGKLVSLSAQNLVDCSMMYGNKGCGGGFMTRAFQYIIDNNGIDSEESYPYMAQNG 208

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C++         S +  LP  DE ALK  +A VGP++V+I+A+  TF LY SG+YDD  
Sbjct: 209 TCQYNVSTRAATCSKYVELPYADEAALKDAVANVGPVSVAIDATQPTFFLYRSGVYDDPR 268

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYAL 308
           CT + VNH +L+VGY     ++ W++KN W   +GD GY+ + R + N CGIA+YA Y  
Sbjct: 269 CTQE-VNHGVLVVGYGTLNEKDFWLVKNSWGERFGDGGYIRMSRNHANHCGIASYASYPQ 327

Query: 309 I 309
           I
Sbjct: 328 I 328


>gi|348531523|ref|XP_003453258.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 341

 Score =  216 bits (551), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 113/306 (36%), Positives = 178/306 (58%), Gaps = 15/306 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K++K Y  ++ ++++K  W +N K +  HN  A QGL  Y L     +D+    Y + ++
Sbjct: 39  KFEKSYDSESDEAQRKQIWLNNRKHVLVHNILADQGLKSYRLGMTQFADMENEEYKRLVS 98

Query: 76  R-----LTHSRIRR--TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           +        S  RR  T  R P+     ++PD +DWR+KG++T   NQ DCG+C+AFS  
Sbjct: 99  QGCLHSFNSSLPRRGSTFFRLPKG---TVLPDTVDWRDKGYVTNVQNQMDCGSCWAFSAT 155

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            +++GQ F+ T ++  LS QQ+VDCS   GN GC GG + +   Y+Q  GG+  EE YPY
Sbjct: 156 GSLEGQHFRKTGKLVSLSKQQLVDCSGEFGNEGCNGGLMDSAFQYIQANGGIDTEESYPY 215

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           + +   C++   +     + +  + P +E  LK  +AT+GPI+V+I+A   +FQ Y SG+
Sbjct: 216 EAEDGKCRYNPKSTGATCTGYVDVQPANEETLKEAVATIGPISVAIDAFHPSFQFYESGV 275

Query: 249 YDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           YD+  C+S  ++HA+L VGY T N    W++KN     WG+ GY+ + R  +N+CGIA  
Sbjct: 276 YDEPDCSSTMLDHAVLAVGYGTENGLDYWLVKNSAGVGWGEKGYIKMSRNKSNQCGIATA 335

Query: 304 AVYALI 309
           A Y L+
Sbjct: 336 ASYPLV 341


>gi|348525618|ref|XP_003450319.1| PREDICTED: cathepsin S-like [Oreochromis niloticus]
          Length = 330

 Score =  216 bits (551), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 110/301 (36%), Positives = 171/301 (56%), Gaps = 6/301 (1%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  ++++Y     +  ++  W+ N + I  HN+EA  G+H + +  NHL D+     +++
Sbjct: 31  KSTHRREYNGLGEEGIRRAIWEKNMRMIEAHNEEAALGIHSFEMGMNHLGDMTSEEVVEK 90

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           MT L     +         +    IP  +D+R+KG +T   NQ  CG+C+AFS A A++G
Sbjct: 91  MTGLQIPMNQERSFTLAMDDMPSKIPKSVDYRKKGMVTSVKNQGACGSCWAFSAAGALEG 150

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+ KST ++ +LS Q +VDCS   GN GC GG +     YV    G+  +  YPY G+  
Sbjct: 151 QLAKSTGKLVDLSPQNLVDCSGKYGNHGCNGGFMTRAFQYVIDNHGIDSDASYPYTGRDE 210

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C++       + SS+  LP  DE+ALK  LAT+GPI+V+I+A    F  Y SG+Y+D +
Sbjct: 211 QCRYNPATRAANCSSYQFLPEGDENALKQALATIGPISVAIDARRPRFSFYRSGVYNDPS 270

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           CT + VNH +L VGY     ++ W++KN W   +GD GY+ + R   N+CGIA YA Y +
Sbjct: 271 CTQE-VNHGVLAVGYGSLNGQDYWLVKNSWGSTFGDQGYIRMARNTGNQCGIALYACYPV 329

Query: 309 I 309
           +
Sbjct: 330 M 330


>gi|225707912|gb|ACO09802.1| Cathepsin K precursor [Osmerus mordax]
          Length = 331

 Score =  216 bits (551), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 110/299 (36%), Positives = 162/299 (54%), Gaps = 8/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K+Y     +  ++  W+ N + I  HNQEA  G+H Y L  N+L D+      ++M  
Sbjct: 35  HNKEYNGLDEEGIRRAIWEKNMRMIEAHNQEAALGMHSYELGMNNLGDMTSEEVAEKMMG 94

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L     R         N    +P  +D+R KG +TP  NQ  CG+C+AFS   A++GQ+ 
Sbjct: 95  LQVPLNRDRGNTFVPDNTVERLPKSIDYRRKGMVTPVKNQGSCGSCWAFSSVGALEGQLM 154

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K+T ++ +LS Q +VDC  ++ N GC GG + N  NYV+   G+  E  YPY G+   C 
Sbjct: 155 KTTGKLVDLSPQNLVDC--VTENNGCGGGYMTNAFNYVRDNQGIDSEAAYPYIGQDETCA 212

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +    +      +  +P  +E AL V +A VGP++V I+A+  TFQ Y  G+Y D  C  
Sbjct: 213 YNVSGMTASCRGYKEIPEGNERALTVAVAKVGPVSVGIDATLSTFQFYQKGVYYDRNCNK 272

Query: 257 DYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           D +NHA+L VGY      +  WI+KN WS  WG+ GY+ + R   N CGIAN A Y ++
Sbjct: 273 DDINHAVLAVGYGVTPKGKKYWIVKNSWSESWGNKGYILMARNRGNLCGIANLASYPIM 331


>gi|440893559|gb|ELR46281.1| Cathepsin L1 [Bos grunniens mutus]
          Length = 330

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/292 (39%), Positives = 163/292 (55%), Gaps = 21/292 (7%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL---HPRHYIKEMTRLTHSRIRRTL 86
           +K  W+ N K I  HNQE  QG H +++  N   D+     RH +    R  + + + T+
Sbjct: 48  RKAVWKKNMKMIELHNQEYSQGKHSFSMAMNAFGDMTNEEFRHTMNGFQRQKNKKGKETI 107

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
             S        IP  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS
Sbjct: 108 FAS--------IPPSMDWREKGYVTPVKNQGKCGSCWAFSATGALEGQMFQKTGKLVSLS 159

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDI 206
            Q +VDCS   GN GC GG + N   YV   GGL  EE YPY G    C +   N   + 
Sbjct: 160 EQNLVDCSQPEGNRGCHGGFIDNAFQYVLDVGGLDSEESYPYTGLVGTCLYNPNNSAANE 219

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  LP Q E AL   +AT+GPI+V+++A   +FQ Y SGIY +  C+S+ V+HA+L+V
Sbjct: 220 TGFVDLPKQ-EKALMKAVATLGPISVAVDAHNPSFQFYKSGIYYEPNCSSESVDHAVLVV 278

Query: 267 GYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY            W++KN W  HWG +GY+ + K  NN CGIA  A Y  +
Sbjct: 279 GYGFEGADSDDNKYWLVKNSWGEHWGMDGYIKMAKDRNNHCGIATMASYPTV 330


>gi|72008176|ref|XP_780713.1| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 335

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/304 (36%), Positives = 171/304 (56%), Gaps = 8/304 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K Y     ++ +KL W+ N   +  HN +   G   Y L  N  +DL    ++  
Sbjct: 32  KNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGHFTYALGMNQFADLKNEEFVAM 91

Query: 74  MTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           MT    +   +    S    SN    +P  +DWR KG++TP  +Q  CG+C+AFS   ++
Sbjct: 92  MTGFRVNGTSKAAKGSTFLPSNNIGELPKTVDWRTKGYVTPVKDQGQCGSCWAFSTTGSL 151

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ FK+T ++  LS Q +VDCS   GN GC GG +     Y+  AGG+  EE YPYK  
Sbjct: 152 EGQHFKATGKLVSLSEQNLVDCSGKEGNEGCDGGLMDQAFQYIIKAGGIDTEESYPYKAV 211

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C FK+ NI   ++ ++ +    E AL+  +A +GPI+V+I+AS  +FQLY SG+Y++
Sbjct: 212 DGECHFKKANIGATVTGYTDVTSDSETALQKAVAHIGPISVAIDASHMSFQLYKSGVYNE 271

Query: 252 EACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
             C+S  ++H +L VGY   S     WI+KN W+  WG NGY+++ R  +N+CGIA  A 
Sbjct: 272 PDCSSTLLDHGVLAVGYGTTSDGTDYWIVKNSWAETWGMNGYLWMSRNKDNQCGIATQAS 331

Query: 306 YALI 309
           Y L+
Sbjct: 332 YPLV 335


>gi|225706086|gb|ACO08889.1| Cathepsin S precursor [Osmerus mordax]
          Length = 333

 Score =  216 bits (549), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 177/304 (58%), Gaps = 12/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K++ K+Y+ +  +  ++  W+ N + I  HN EA  G+H Y L  NH+ D+     ++ 
Sbjct: 34  KKQHGKNYKTEVEELGRREVWERNLQLISLHNLEASMGMHTYDLGMNHMGDMTEEEILQS 93

Query: 74  MTRLTHSRIRRTLVRSPES---NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
              L   ++   L R P +   +    +PD +DWR+KG++T   NQ  CG+C+AFS   A
Sbjct: 94  FASL---KVPADLKREPSAFVASSGTPVPDTVDWRQKGYVTQVKNQGSCGSCWAFSSVGA 150

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+ ++T ++ +LS Q +VDCS   GN GC GG +     YV    G+  +  YPY+G
Sbjct: 151 LEGQLMRTTGKLLDLSPQNLVDCSSKYGNKGCNGGFMSEAFQYVIDNKGIDSDTSYPYQG 210

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
            Q  C +       + + +S LP  DE  LK  +A +GPI+V+I+A+  +F L+ SG+Y+
Sbjct: 211 VQGTCHYNPSYRSANCTRYSFLPEGDETTLKQAVAMIGPISVAIDATRPSFILWRSGVYN 270

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D  CT   +NHA+L+VGY     ++ W++KN W   +G+NGY+ + R  NN+CGIA Y  
Sbjct: 271 DLTCTQK-INHAVLVVGYGTLDGQDYWLVKNSWGTRFGENGYIRMSRNRNNQCGIALYGC 329

Query: 306 YALI 309
           Y ++
Sbjct: 330 YPIM 333


>gi|403300987|ref|XP_003941193.1| PREDICTED: cathepsin L2 [Saimiri boliviensis boliviensis]
          Length = 333

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 169/290 (58%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  +G HG+T+  N   D+    + + M    + + +   V R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSRGKHGFTMAMNAFGDMTNEEFRQVMVCFRNQKHKNGKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 GPLL---LDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV+  GGL  E  YPY+ K  ICK+K  N V + + 
Sbjct: 165 NLVDCSRPQGNQGCNGGFMNYAFRYVKENGGLDSEASYPYEAKDGICKYKPENSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           + V+P  ++  +K  +ATVGPI+V+++AS  +FQ Y SGIY ++ C+S  ++H +L+VGY
Sbjct: 225 FVVIPTHEKELMKA-VATVGPISVAVDASHSSFQFYKSGIYFEKKCSSKNLDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       W++KN W   WG NGY+ + K  NN CGIA  A Y ++
Sbjct: 284 GFEGANSKDNKYWLIKNSWGPEWGLNGYIKIAKDQNNHCGIATAASYPVV 333


>gi|449673497|ref|XP_002169904.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 325

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 176/304 (57%), Gaps = 23/304 (7%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y  ++ ++ +   W+ N  +I  +N +++  +    LR NH  D+    +  +M  
Sbjct: 34  HNKAYSHESEENVRYAIWKDNMNRITEYNSKSKNVI----LRMNHFGDMTNTEFRAKMNG 89

Query: 77  LTHSRIRRTLVRSPESNESVLIPDH------LDWREKGFITPDWNQEDCGACYAFSIASA 130
           L        L+   ++  + L+P H      +DWR +G++TP  NQ  CG+C+AFS   A
Sbjct: 90  L--------LLHKHQNGSTFLVPSHTAAPDAVDWRSEGYVTPVKNQGQCGSCWAFSSTGA 141

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ FK T  +  LS Q +VDCS   GN GC GG + N  +Y++  GG+  E  YPY+G
Sbjct: 142 LEGQHFKKTGRLVSLSEQNLVDCSTDYGNNGCNGGLMDNAFSYIKANGGIDTETGYPYEG 201

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C++ + +I  D + +  +P  DE ALK  +ATVGP++V+I+AS  +FQ Y SG+YD
Sbjct: 202 QDGTCRYSKSSIGADDTGFVDIPEGDEDALKQAVATVGPVSVAIDASHMSFQFYHSGVYD 261

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
           +  C+   ++H +L+VGY     ++ W++KN W   WG  GY+Y+ R N N+CGIA+ A 
Sbjct: 262 EPQCSPSALDHGVLVVGYGTDNGKDYWLVKNSWGTGWGTEGYIYMSRNNQNQCGIASKAS 321

Query: 306 YALI 309
           Y L+
Sbjct: 322 YPLV 325


>gi|223673161|gb|ACN12762.1| Cathepsin S precursor [Salmo salar]
          Length = 330

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/304 (37%), Positives = 168/304 (55%), Gaps = 12/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K+Y+ +  +  ++  W+ N + I  HN EA   +H Y L  NH+ D+      + 
Sbjct: 31  KKTHGKNYQTEVEELGRREVWERNLQLISLHNLEASMDMHTYDLGMNHMGDMTQEEIAQS 90

Query: 74  MTRLTHSRIRRTLVRSPES---NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
              L    +   L R P +   +    IPD  DWREKG++T    Q  CG+C+AFS   A
Sbjct: 91  FASLL---VPADLKREPSAFAGSSGAPIPDTFDWREKGYVTGVKMQGSCGSCWAFSSVGA 147

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+ K+T ++ +LS Q +VDCS   GN GC GG +     YV    G+  ++ YPYKG
Sbjct: 148 LEGQLMKTTGKLIDLSPQNLVDCSSKYGNKGCHGGFMTKAFQYVIDNQGIASDQSYPYKG 207

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
            Q  C +       + S +S LP  DE  LK  LAT+GPI+V I+A+  +F  Y SG+Y+
Sbjct: 208 VQQQCIYNPAQRAANCSRYSFLPEGDEGVLKEALATIGPISVGIDATRPSFAFYRSGVYN 267

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D  CT    NHA+L VGY     ++ W++KN W   WGD GY+ + R  +N+CGIA Y  
Sbjct: 268 DPTCTKK-TNHAVLAVGYGTLGGQDYWLVKNSWGLSWGDQGYIRMSRNKDNQCGIALYGC 326

Query: 306 YALI 309
           Y ++
Sbjct: 327 YPVM 330


>gi|156397875|ref|XP_001637915.1| predicted protein [Nematostella vectensis]
 gi|156225031|gb|EDO45852.1| predicted protein [Nematostella vectensis]
          Length = 331

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/302 (36%), Positives = 174/302 (57%), Gaps = 15/302 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K+Y  K  ++ +   WQ+N KKI THN+    G H + L  NHL D+      + +  
Sbjct: 36  HGKEYPNKNEETMRNFIWQNNLKKIVTHNE----GKHSFKLAMNHLGDMTSLEISQTLLG 91

Query: 77  LTHSRIRRTLVRS----PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           L   +   +  +     P +N  V + D +DWR KG++TP  NQ  CG+C+AFS   A++
Sbjct: 92  LKLKKHAESQPKGATFLPPAN--VKVVDSIDWRSKGYVTPVKNQGQCGSCWAFSTTGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F+ T ++  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YPY  K 
Sbjct: 150 GQHFRKTGKLVSLSEQNLVDCSGKYGNNGCEGGLMDNAFQYIKENGGIDTEKSYPYLAKD 209

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
            +C + +  I    + +  +P  DE+AL+  LA+VGPI+++I+AS  TF  Y  G+YDD 
Sbjct: 210 GVCHYNKSAIGAKDTGFVDIPTGDENALQQALASVGPISIAIDASQSTFHFYHQGVYDDP 269

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYA 307
            C+S  ++H +L VGY     ++ W++KN W   WG+ GY+ + R + ++CG+A+ A Y 
Sbjct: 270 DCSSTRLDHGVLAVGYGTDDGKDYWLVKNSWGPSWGEEGYIKIARNDHDKCGVASKASYP 329

Query: 308 LI 309
           L+
Sbjct: 330 LV 331


>gi|327322928|gb|AEA48885.1| cathepsin S [Oplegnathus fasciatus]
          Length = 337

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/303 (38%), Positives = 175/303 (57%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ ++K Y+ +  D +++  W+ N   I  HN EA  GLH Y L  NH+ DL     ++ 
Sbjct: 38  KRTHEKKYQNEGEDVRRRELWEKNLMLITMHNLEASMGLHTYELSMNHMGDLTQEEILQS 97

Query: 74  MTRLTH-SRIRRTLVRSPESNES-VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
              L+  + I+R    SP +  S   +PD +DWREKG +T    Q  CG+C+AFS A A+
Sbjct: 98  FATLSPPTDIQR--APSPFAGTSGAAVPDTVDWREKGCVTSVKMQGSCGSCWAFSAAGAL 155

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+ K+T ++ +LS Q +VDCS   GN GC GG +     YV    G+  +  YPY G+
Sbjct: 156 EGQLAKTTGKLLDLSPQNLVDCSSKYGNHGCNGGFMHRAFQYVIDNQGIDSDASYPYTGQ 215

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C +       + S +S LP  DE ALK  LAT+GPI+V+I+A+  +F  Y SG+YDD
Sbjct: 216 SQQCHYNPAYRAANCSRYSSLPEGDEGALKEALATIGPISVAIDATRPSFTFYRSGVYDD 275

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           +  T + VNH +L VGY     ++ W++KN W   +GD G++ + R  N++CGIA Y  Y
Sbjct: 276 QTYTRN-VNHGVLAVGYGTLNGKDYWLVKNGWGSTFGDKGFIRMARNKNDQCGIALYGCY 334

Query: 307 ALI 309
            ++
Sbjct: 335 PIM 337


>gi|226821419|gb|ACO82385.1| cathepsin K [Lutjanus argentimaculatus]
          Length = 330

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 165/299 (55%), Gaps = 8/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           ++K+Y     +  ++  W+ N + I  HNQEA  G+H Y +  NHL D+      ++MT 
Sbjct: 34  HRKEYNGLDEEGIRRAVWEKNMRMIEAHNQEAALGMHSYEMAMNHLGDMTSEEVSEKMTG 93

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L      +        ++   +P ++D+R+KG +T   NQ  CG+C+AFS A A++GQ+ 
Sbjct: 94  LLVPLNHKRSFTMALDDDVNRLPKYIDYRKKGMVTSVKNQGSCGSCWAFSSAGALEGQLA 153

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K T ++ +LS Q +VDC  ++ N GC GG +     YV   GG+  EE YPY G+   C+
Sbjct: 154 KKTGQLVDLSPQNLVDC--VTENDGCGGGYMTKAFQYVADNGGIDSEEAYPYIGEDQPCR 211

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +    +      +  +P  +EHAL V L   GP++V I+A+  +FQ Y+ G+Y D +C  
Sbjct: 212 YNATGMAAQCKGYKEIPEGNEHALAVALFKAGPVSVGIDATLSSFQFYSKGVYYDPSCNK 271

Query: 257 DYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           + +NHA+L VGY      +  WI+KN W   WG  GY+ + R   N CGIAN A Y ++
Sbjct: 272 EDINHAVLAVGYGVTGKGKKYWIVKNSWGESWGKGGYILMARNRGNLCGIANLASYPIM 330


>gi|226821425|gb|ACO82388.1| cathepsin S [Lutjanus argentimaculatus]
          Length = 337

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/303 (38%), Positives = 174/303 (57%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y+ +  +  ++  W+ N   I  HN EA  GLH Y L  NH+ D+ P    + 
Sbjct: 38  KKTHEKKYQNEVEEFSRRRLWEKNLMLITMHNLEASMGLHTYELGMNHMGDMTPEEIWQS 97

Query: 74  MTRLTH-SRIRRTLVRSPESNES-VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
              LT  + I+R    SP +  S   IPD +DWREKG +T    Q  CG+C+AFS   A+
Sbjct: 98  FATLTPPTDIQR--APSPFAGSSGADIPDTMDWREKGCVTSVKTQGSCGSCWAFSAVGAL 155

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+ K T ++ +LS Q +VDCS   GN GC GG + +   YV    G+  +  YPY G+
Sbjct: 156 EGQLAKKTGKLVDLSPQNLVDCSTKYGNHGCNGGFMDHAFQYVIDNQGIDSDASYPYTGR 215

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C +       + SS++ LP  DE ALK  LAT+GPI+V+I+A+   F  Y SG+Y+D
Sbjct: 216 SDQCHYNPSYRAANCSSYNFLPEGDEGALKQALATIGPISVAIDATRPRFIFYRSGVYND 275

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +C+ + VNH +L VGY     ++ W++KN W   +GD GY+ + R  N++CGIA Y  Y
Sbjct: 276 PSCSQE-VNHGVLAVGYGTLNGQDYWLVKNSWGTKFGDQGYIRMARNQNDQCGIAMYGCY 334

Query: 307 ALI 309
            ++
Sbjct: 335 PIM 337


>gi|33242886|gb|AAQ01147.1| cathepsin [Haplochromis chilotes]
          Length = 334

 Score =  215 bits (547), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/303 (40%), Positives = 172/303 (56%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K Y+    ++ ++  W +N K I  HN EA  GLH Y L  NH+ DL     ++ 
Sbjct: 35  KKTHGKSYKNDVENAHRRELWGNNLKMITVHNLEASMGLHTYELGMNHMGDLTEEEIMQF 94

Query: 74  MTRLTH-SRIRRTLVRSPESNES-VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
              LT  + I+R    SP +  S   IPD +DWREKG +T    Q  CG+C+AFS A A+
Sbjct: 95  FASLTPPTDIQR--APSPFAGASGSGIPDTMDWREKGCVTKVKMQGACGSCWAFSAAGAL 152

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+ KST ++ +LS Q +VDCS   GN GC GG +     YV    G+  +  YPY G+
Sbjct: 153 EGQLAKSTGKLVDLSPQNLVDCSGKYGNHGCNGGFMTRAFQYVIDNHGIDSDASYPYIGR 212

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C +       + SS+  LP  DE+ALK  LATVGPI+V+I+A    F  Y SG+Y+D
Sbjct: 213 DDQCHYNPATRAANCSSYQFLPEGDENALKQGLATVGPISVAIDARRPRFSFYRSGVYND 272

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT   VNH +L VGY     ++ W++KN W   +GD GY+ + R   N+CGIA Y  Y
Sbjct: 273 PSCTQK-VNHGVLAVGYGTLNGQDYWLVKNSWGTTFGDQGYIRMARNTGNQCGIALYPCY 331

Query: 307 ALI 309
            ++
Sbjct: 332 PVM 334


>gi|27681979|ref|XP_225125.1| PREDICTED: cathepsin 7-like [Rattus norvegicus]
 gi|109505372|ref|XP_001065135.1| PREDICTED: cathepsin 7-like [Rattus norvegicus]
          Length = 331

 Score =  214 bits (546), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 112/301 (37%), Positives = 169/301 (56%), Gaps = 15/301 (4%)

Query: 18  KKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL 77
           +K Y  +  + ++ L W+ N K I  H  E    ++ +T+  N   D+      +EM  +
Sbjct: 37  EKTYSPEEEEQRRAL-WEENVKMIKQHTVENGLWMNNFTIEMNQFCDMTD----EEMRMM 91

Query: 78  THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFK 137
             S              +V IP  LDWR+ G++TP   Q  CGAC+ F++A +I+GQ+FK
Sbjct: 92  IDSSAPTLRKEKRVQKRNVEIPKTLDWRKDGYVTPVRRQGACGACWGFAVAGSIEGQLFK 151

Query: 138 STSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKF 197
            T ++  LS+Q +VDCS   G +GC GG + N   YV+  GGL  E  YPY+ K+  C++
Sbjct: 152 KTGKLSPLSVQNLVDCSRSFGTMGCNGGRIYNAFQYVKNNGGLEAEATYPYEAKEGNCRY 211

Query: 198 KRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSD 257
           +    VV ++ + V+ P++E AL   L  +GPIAV I+A   +F+ YA GIY +  C  D
Sbjct: 212 RPEKSVVKVTRFLVV-PRNEEALINALVNIGPIAVGIDAQHESFKKYAGGIYHEPNCKRD 270

Query: 258 YVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
             NH+MLLVG+         R  W++KN +   WG+ GYM + RG NN CGIA+YA+Y +
Sbjct: 271 SPNHSMLLVGFGYEGQESEGRKYWLVKNSYGEQWGEKGYMKIPRGQNNYCGIASYAMYPV 330

Query: 309 I 309
           +
Sbjct: 331 L 331


>gi|154183745|gb|ABS70713.1| cathepsin L-like cysteine proteinase [Dermacentor variabilis]
          Length = 333

 Score =  214 bits (546), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 108/300 (36%), Positives = 170/300 (56%), Gaps = 7/300 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y+    +  +   +  N   +  HN++  +GL  Y L  N   DL P  + +    
Sbjct: 34  HKKSYQSNMEELLRFKIFSENSLLVARHNEKYARGLVSYKLGMNQFGDLLPHEFARMFNG 93

Query: 77  LTHSRI--RRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
              +R   R +    P +     +P  +DWREKG +TP  NQ  CG+C+AFS   +++GQ
Sbjct: 94  YRGARTAGRGSTFLPPANVNYSSLPQSMDWREKGAVTPVKNQGQCGSCWAFSTTGSLEGQ 153

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
            F  T  +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YPY+ +   
Sbjct: 154 HFLKTGVLVSLSEQNLVDCSETFGNHGCEGGLMDNAFQYIKANGGIDTEKSYPYEAEDGE 213

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C+FK+ N+    + +  +    E  LK  +ATVGP++V+I+AS  +FQLY+ G+YD+  C
Sbjct: 214 CRFKKQNVGATDTGFVDIEQGSEDDLKKAVATVGPVSVAIDASHSSFQLYSEGVYDETEC 273

Query: 255 TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           +S+ ++H +L+VGY     +  W++KN W+  WGDNGY+ + R  +N+CGIA+ A Y L+
Sbjct: 274 SSEQLDHGVLVVGYGVEDGKKYWLVKNSWAESWGDNGYIKMSRDKDNQCGIASAASYPLV 333


>gi|356582227|ref|NP_001239115.1| cathepsin L1 precursor [Canis lupus familiaris]
 gi|62899810|sp|Q9GL24.1|CATL1_CANFA RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|10185020|emb|CAC08809.1| cathepsin L [Canis lupus familiaris]
          Length = 333

 Score =  214 bits (546), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/290 (40%), Positives = 164/290 (56%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVR 88
           ++  W+ N K I  HN+E  QG HG+T+  N   D+    + + M    + + ++  + +
Sbjct: 48  RRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E   IP  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFAE---IPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-ICKFKRPNIVVDIS 207
            +VDCS   GN GC GG + N   YV+  GGL  EE YPY G+ +  C +K P       
Sbjct: 165 NLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYK-PECSAAND 223

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
           +  V  PQ E AL   +AT+GPI+V+I+A   +FQ Y SGIY D  C+S  ++H +L+VG
Sbjct: 224 TGFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVG 283

Query: 268 Y-------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y           WI+KN W   WG NGY+ + K  NN CGIA  A Y  +
Sbjct: 284 YGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 333


>gi|157278117|ref|NP_001098157.1| cathepsin S precursor [Oryzias latipes]
 gi|50251130|dbj|BAD27582.1| cathepsin S [Oryzias latipes]
          Length = 327

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/305 (38%), Positives = 169/305 (55%), Gaps = 15/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y  +  +  ++  W+ N + I  HN E   GLH Y L  NHL DL     I  
Sbjct: 29  KKTYSKTYSHEIEEFGRRRIWEENLEMISVHNLEVSLGLHSYELAMNHLGDLTIEELIAS 88

Query: 74  MTRLTH----SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           +T         RI   LV+   S     +P+ +DWRE G +T    Q  CG+C+AFS   
Sbjct: 89  LTGTVAPVGLERIHYDLVKINTS-----VPESVDWREGGLVTSVKTQGRCGSCWAFSAVG 143

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K+T  +  LS Q +VDCS   GN GC GG + N   YV    G+  +  YPY 
Sbjct: 144 ALEGQLKKTTGILTSLSPQNLVDCSTKYGNYGCKGGFMSNAFQYVIKNQGISSDAAYPYI 203

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           GK+  CK+   +   + + ++ LP  DE ALKV +AT+GPI+V+I+AS   F  Y  G+Y
Sbjct: 204 GKRDKCKYDSKHRAANCTGYNFLPKGDEFALKVGVATIGPISVAIDASRPKFLFYRHGVY 263

Query: 250 DDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            D +C+ + VNH +L+VGY T N    W++KN W   +GD GY+ + R   N+CGIA YA
Sbjct: 264 KDHSCSHN-VNHGVLVVGYGTENGEDYWLVKNSWGERYGDGGYIKMARNRRNQCGIALYA 322

Query: 305 VYALI 309
            + ++
Sbjct: 323 CFPVM 327


>gi|288548566|gb|ADC52431.1| cathepsin L2 cysteine protease [Pinctada fucata]
          Length = 330

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 113/315 (35%), Positives = 176/315 (55%), Gaps = 16/315 (5%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           + EW I     +K+Y K Y+ +  +++++L W+SN   I  HN  A +G H + +  N  
Sbjct: 24  DNEWNIF----KKQYNKLYQNEE-EARRRLVWESNLDFITLHNLAADRGEHTFWVGMNEY 78

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSP---ESNESVLIPDHLDWREKGFITPDWNQEDC 119
            D+    + K M      R+R     +P     N    +PD +DWR KG++TP  NQ  C
Sbjct: 79  GDMTNEEFTKTMNGY---RMRNKTSNAPVFMPPNNMGDLPDTVDWRPKGYVTPIKNQGQC 135

Query: 120 GACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGG 179
           G+C++FS   +++GQ FK T ++  LS Q +VDCS   GN GC GG + +   Y++   G
Sbjct: 136 GSCWSFSATGSLEGQTFKKTGKLVSLSEQNLVDCSKKQGNHGCEGGLMDDAFTYIKANNG 195

Query: 180 LMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
           +  E  YPYK +   C+FK  ++    + +  +  +DE ALK  +ATVGPI+V+I+AS  
Sbjct: 196 IDTEASYPYKARDGKCEFKSADVGATDTGFVDIKTKDEEALKQAVATVGPISVAIDASHM 255

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG- 294
           +FQLY +G+Y D  C+   ++H +L VGY    +++ W++KN W   WG  GY+ + R  
Sbjct: 256 SFQLYRTGVYHDWFCSQTKLDHGVLAVGYGTEDSKDYWLVKNSWGESWGQKGYIQMSRNR 315

Query: 295 NNRCGIANYAVYALI 309
            N CGIA  A Y  +
Sbjct: 316 RNNCGIATSASYPTV 330


>gi|308322281|gb|ADO28278.1| cathepsin L [Ictalurus furcatus]
          Length = 359

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 113/305 (37%), Positives = 178/305 (58%), Gaps = 10/305 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++K+ K Y+    +S++K  WQ NHK +  HN  A +G+  Y L  N+ +D+  + Y + 
Sbjct: 29  KQKFGKIYKSVEEESQRKKTWQENHKLVMNHNILADKGIKSYRLGMNYFADMSNQEYRQS 88

Query: 74  MTRLTHSRIRRTLVRSPESNESVL----IPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           + +   S   RTL  S  +    +    +P+ ++W + G++T    Q+ C +C+AFS   
Sbjct: 89  VFKGCLS-FNRTLNHSAATFLRQVGGPALPNTVNWTQMGYVTEVEEQKQCNSCWAFSATG 147

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ FK T ++  LS QQ+VDCS   GN GC GG +     YV+  GGL  EE YPY+
Sbjct: 148 ALEGQTFKKTGKLVSLSKQQLVDCSKKFGNNGCKGGLMNWAFEYVKENGGLHTEESYPYE 207

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            K   C+     + V  +    +  +DE+AL+  +AT+GPI+V+I+A+  +FQLY SG+Y
Sbjct: 208 AKDGSCRDNLGTVGVTCTGHVQINSEDENALQEAVATIGPISVAIDANHTSFQLYESGLY 267

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           D+  C+   +NH +L VGY     ++ W++KN W  +WGD GY+ + R  NN+CGIA  A
Sbjct: 268 DEPDCSCTDMNHGVLAVGYGTDDGKDYWLIKNSWGINWGDKGYIKMSRNKNNQCGIATAA 327

Query: 305 VYALI 309
            Y L+
Sbjct: 328 SYPLV 332


>gi|337255596|gb|AEI61876.1| cathepsin K [Gadus morhua]
          Length = 331

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 163/299 (54%), Gaps = 8/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +++DY     +  ++  W+ N + I  HN+EA  G+H Y +  NHL D+      ++M  
Sbjct: 35  HRRDYNGLDEEGIRRAVWEKNSRMIAAHNEEAALGMHSYEMGMNHLGDMTSEEVSEKMMG 94

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L     R     +   ++   +P  +D+R+KG +T   NQ  CG+C+AFS A A++GQ+ 
Sbjct: 95  LLVPLNRDLTFTAAFDDKLEKLPKSVDYRKKGMVTSVKNQGSCGSCWAFSSAGALEGQLA 154

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K+T  + +LS Q +VDC  ++ N GC GG + N  +YV   GG+  +E YPY G+   C 
Sbjct: 155 KTTGTLRDLSPQNLVDC--VTENSGCGGGYMTNAFSYVMQNGGIDSDESYPYVGQDQQCG 212

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           F    +  +   +  +P  DE AL V L   GP++V I+A   TFQ Y  G+Y D  C +
Sbjct: 213 FNVSGVAAECKGYKQIPVGDERALAVALFKAGPVSVGIDAGLGTFQFYQHGVYYDRNCNA 272

Query: 257 DYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           + +NHA+L VG+      +  WI+KN W   WG  GY+ + R   N CGIAN A Y ++
Sbjct: 273 EDINHAVLAVGFGVTAKGKKYWIIKNSWGEDWGHKGYILMARNRGNLCGIANMASYPIM 331


>gi|54020916|ref|NP_001005702.1| cathepsin K (pycnodysostosis) precursor [Xenopus (Silurana)
           tropicalis]
 gi|49671274|gb|AAH75275.1| cathepsin K (pycnodysostosis) [Xenopus (Silurana) tropicalis]
          Length = 329

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 115/304 (37%), Positives = 171/304 (56%), Gaps = 14/304 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y + Y  +  + +++  W+ N   I  HN+E  QGLH Y L  NHL D+     +++
Sbjct: 32  KKTYHRQYNGQLDEIRRRQIWEKNLNLISQHNKEFSQGLHTYDLAMNHLGDMTSEEVVQK 91

Query: 74  MTRLT---HSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           M  L    + R   T +  PE N    IP+++D+R+KG++TP  NQ  CG+C+AFS   A
Sbjct: 92  MMGLKVPPNHRPNNTYI--PEWNSR--IPEYIDYRKKGYVTPVHNQGICGSCWAFSSVGA 147

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+ K T ++  LS Q +VDC   + N GC GG + N   YV+  GG+  + +YPY G
Sbjct: 148 LEGQLMKKTGKLVSLSPQNLVDCD--TDNYGCEGGYMTNAFGYVRDNGGIDSDAEYPYVG 205

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C +   +       +  +P   E ALK  +A VGP++VSI+AS  +FQ Y  G+Y 
Sbjct: 206 QDEGCHYNPADKAATCKGYKEIPVGSEKALKRAVANVGPVSVSIDASLPSFQFYKKGVYY 265

Query: 251 DEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D +C  D VNHA+L+VGY        WI+KN W   WG  GY+ L R   N CGIA+ A 
Sbjct: 266 DSSCNPDAVNHAVLVVGYGNEKGIKHWIIKNSWGDWWGKKGYVLLARDKKNACGIASLAS 325

Query: 306 YALI 309
           + ++
Sbjct: 326 FPVM 329


>gi|395819351|ref|XP_003783057.1| PREDICTED: cathepsin L1-like [Otolemur garnettii]
          Length = 333

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 111/289 (38%), Positives = 160/289 (55%), Gaps = 12/289 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W+ N K I  HNQE  QG HG+T+  N   D+    + + M    + + ++  V  
Sbjct: 48  RRAVWEKNMKMIEVHNQEYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFRNQKHKKGKVFQ 107

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
             S   + +P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q 
Sbjct: 108 EPS--FLEVPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLISLSEQN 165

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW 209
           +VDCS   GN GC GG +     Y++  GGL  EE YPY      CK+ RP   V   + 
Sbjct: 166 LVDCSRPQGNEGCDGGLMDYAFQYIKENGGLDSEESYPYDAMDESCKY-RPEYSVANDTG 224

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY- 268
            V  P++E AL   +ATVGPI+V+I+A   +FQ Y  G+Y +  C+SD V+H +L+VGY 
Sbjct: 225 FVDIPKEEKALMKAVATVGPISVAIDAGHESFQFYKEGVYFEPECSSDNVDHGVLVVGYG 284

Query: 269 -------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                      W++KN W   WG  GY+ + K   N CGIA  A Y  +
Sbjct: 285 YEETESDNNKFWLVKNSWGEEWGLGGYIKMTKDQKNHCGIATAASYPTV 333


>gi|405971604|gb|EKC36431.1| Cathepsin L [Crassostrea gigas]
          Length = 384

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 167/299 (55%), Gaps = 7/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y     +S++   ++ N  +I  HN+    G   Y L  N  +DL    ++     
Sbjct: 86  HDKSYEDHEEESRRFEIFRENVLRIEKHNKLFHLGKKSYYLGVNQFTDLEYAEFVN-FNG 144

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L  + +  T   S  S  ++++PD +DWR KG++T   NQ  CG+C+AFS   +++GQ F
Sbjct: 145 LKMTNLNNTKCSSHLSANNIVVPDSVDWRSKGYVTKVKNQGACGSCWAFSATGSLEGQYF 204

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           +   ++  LS  Q+VDCS   GN GC GG + N   YV+  GG+  E DYPYK +Q  C 
Sbjct: 205 RKNGKLVPLSESQLVDCSGSFGNEGCNGGFMENAFKYVKSVGGIESESDYPYKARQRTCA 264

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           F +  ++  +S    +    E +LK  ++ VGP++V+I+A   +FQLYA G+YD+  C++
Sbjct: 265 FDKTKVIATVSGCVDVESGSESSLKEVVSEVGPVSVAIDAGHSSFQLYAGGVYDEPLCST 324

Query: 257 DYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
             +NH +L VGY      ++ WI+KN W   WG  GY+ + R  NN+CGIA+ A Y L+
Sbjct: 325 SRLNHGVLCVGYGTSLQGKDYWIVKNSWGVRWGVEGYIKMSRNKNNQCGIASEASYPLV 383


>gi|444519959|gb|ELV12909.1| Cathepsin L1 [Tupaia chinensis]
          Length = 333

 Score =  214 bits (544), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 109/292 (37%), Positives = 167/292 (57%), Gaps = 12/292 (4%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL 86
           +S ++  W+ N K I  HN E  QG H +T+  N   D+    + + MT   + +  +  
Sbjct: 45  ESLRRAVWEKNLKMIEQHNLEYSQGKHTFTMGMNAFGDMTNEDFRQMMTGFQNQKYNKGE 104

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
           V  P   + + +P+ +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS
Sbjct: 105 VFQPP--QPLEVPESVDWREKGYVTPVKNQHRCGSCWAFSATGALEGQMFRKTGKLVSLS 162

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDI 206
            Q +VDCS    N GC GG +     YV+  GGL  EE YPY+  +S C++   N    +
Sbjct: 163 EQNLVDCSQPQHNSGCKGGLVIKAFQYVKDNGGLDSEESYPYEEMESTCRYSPGNSAATV 222

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  + P +E AL+  +A+VGPI+V+I+A  H+FQ Y  GI  +  C+  ++NHA+L+V
Sbjct: 223 TGFKHI-PAEEKALEKAVASVGPISVAIDAHHHSFQFYTGGILHEPNCSPKWLNHAVLVV 281

Query: 267 GY--------TRNSWILKNWWSHHWGDNGY-MYLKRGNNRCGIANYAVYALI 309
           GY            W++KN W   WG  GY M  K  NN CGIA+ A+Y ++
Sbjct: 282 GYGVMQEGSNNNTYWLVKNSWGERWGVGGYIMMAKDKNNHCGIASDALYPIV 333


>gi|41688064|dbj|BAD08618.1| cathepsin L preproprotein [Cyprinus carpio]
          Length = 337

 Score =  214 bits (544), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 112/293 (38%), Positives = 165/293 (56%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR---TL 86
           +++ W+ N +KI  HN E   G H Y L  N   D+    + + M    H + RR   +L
Sbjct: 48  RRMVWEKNLQKIELHNLEHSMGTHTYRLGMNRFGDMTHEEFRQVMNGYKHKKERRFRGSL 107

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E   +P+ LDWREKG++TP  +Q +CG+C+AFS   A++GQ+F+ T ++  LS
Sbjct: 108 FMEPNFLE---VPNSLDWREKGYVTPVKDQGECGSCWAFSTTGAMEGQMFRKTGKLVSLS 164

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y++   GL  EE YPY G     C +       +
Sbjct: 165 EQNLVDCSRPEGNEGCNGGLMDQAFQYIKDQNGLDSEESYPYVGTDDQPCHYDPKYSAAN 224

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   EHAL   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L 
Sbjct: 225 DTGFVDIPSGKEHALMKAIAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLA 284

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS +WGD GY+Y+ K  +N CGIA  A Y L+
Sbjct: 285 VGYGFEGEDVDGKKYWIVKNSWSENWGDKGYVYMAKDRHNHCGIATAASYPLV 337


>gi|66378053|gb|AAY45871.1| cathepsin L-like cysteine proteinase [Longidorus elongatus]
          Length = 358

 Score =  214 bits (544), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 106/308 (34%), Positives = 171/308 (55%), Gaps = 14/308 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ K Y+ K  +  +   + SNHK I  HN E + G H + L  N  +D+    + + M 
Sbjct: 49  KHAKSYKTKDEELLRFQVFASNHKVIEQHNIEYEAGQHSFALSLNKFADMTNAEFRQRMN 108

Query: 76  RLTHSRIRRTLVRSP--------ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
                  R+     P        E  ++V IPD +DWR++G++T   +Q  CG+C+AFS 
Sbjct: 109 GFKLPAKRKLAKSQPLKEDGMIFEMPDNVTIPDSVDWRKEGYVTKVKDQGSCGSCWAFSA 168

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             +++GQ +K T ++  LS Q +VDC +   + GC GG +     YV+   G+  E  YP
Sbjct: 169 TGSLEGQHYKQTGKLVSLSEQNLVDCDVNGDDEGCNGGYMDGAFQYVETNKGIDTEASYP 228

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           YKG+   C+FK  ++    + +  +P  +E  L+  +ATVGP++V+I+A+   FQ Y+ G
Sbjct: 229 YKGRDGRCRFKSEDVGATDTGFVDIPEGNETLLEAAIATVGPVSVAIDAASFKFQFYSHG 288

Query: 248 IYDDEACTSDYVNHAMLLVGYT-----RNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIA 301
           +Y D +C+ +Y++H +L VGY      +  +I+KN WS  WGD+GY+ + +R NN CGIA
Sbjct: 289 VYYDRSCSPEYLDHGVLAVGYNSTKDGKQYYIVKNSWSEDWGDDGYILMSRRKNNNCGIA 348

Query: 302 NYAVYALI 309
             A Y  +
Sbjct: 349 TMASYPFV 356


>gi|139947602|ref|NP_001077155.1| cathepsin L1 precursor [Bos taurus]
 gi|134025180|gb|AAI34742.1| CTSL1 protein [Bos taurus]
 gi|296484500|tpg|DAA26615.1| TPA: cathepsin L1 [Bos taurus]
          Length = 333

 Score =  214 bits (544), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 115/291 (39%), Positives = 162/291 (55%), Gaps = 16/291 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +K  W+ N K I  HNQE  QG H +++  N   D+    +   M        R+   + 
Sbjct: 48  RKAVWKKNMKMIELHNQEYSQGKHSFSMAMNAFGDMTNEEFRHTMNGFQ----RQKNKKG 103

Query: 90  PESNESVL--IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
            E +E++   IP  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS 
Sbjct: 104 KEFHETIFASIPPSVDWREKGYVTPVKNQGKCGSCWAFSATGALEGQMFQKTGKLVSLSE 163

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDIS 207
           Q +VDCS   GN GC GG + N   YV   GGL  EE YPY G    C +   N   + +
Sbjct: 164 QNLVDCSQPEGNRGCHGGFIDNAFQYVLDVGGLDSEESYPYTGLVGTCLYNPNNSAANET 223

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
            +  LP Q E AL   +A +GPI+V+++A   +FQ Y SGIY +  C+S+ V+HA+L+VG
Sbjct: 224 GFVDLPKQ-EKALMKAVANLGPISVAVDAHNPSFQFYKSGIYYEPNCSSESVDHAVLVVG 282

Query: 268 YTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y            W++KN W  HWG NGY+ + K  NN CGIA  A Y  +
Sbjct: 283 YGFEGADSDDNKYWLVKNSWGEHWGMNGYIKMAKDRNNHCGIATMASYPTV 333


>gi|325303202|tpg|DAA34687.1| TPA_inf: cathepsin L-like cysteine proteinase B [Amblyomma
           variegatum]
          Length = 337

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 171/302 (56%), Gaps = 13/302 (4%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K+Y+ +  +  +   +  N   I  HN++       Y L  N   D+    ++   TR  
Sbjct: 38  KEYQSETEEYYRLKIYMENRMMIARHNEKYANNKVSYKLAMNEYGDMLHHEFVS--TRNG 95

Query: 79  HSRIRRTLVR------SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
             R  R+  R       PE  E   +P  +DWR+KG +TP  NQ  CG+C+AFS   +++
Sbjct: 96  FRRDYRSKPRQGSFYIEPEGIEDKHLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLE 155

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F+ + ++  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YPY G  
Sbjct: 156 GQHFRKSGDMVSLSEQNLVDCSTAFGNNGCEGGLMDNAFKYIKANGGIDTEKSYPYNGTD 215

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C FK+ ++    + +  +P  +EH LK  +ATVGPI+V+I+AS  +FQ Y+ G+YD+ 
Sbjct: 216 GTCHFKKSDVGATDTGFVDIPEGNEHLLKKAVATVGPISVAIDASHQSFQFYSQGVYDEP 275

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            C+S+ ++H +L+VGY     ++ W++KN W   WGD GY+Y+ R  +N+CGIA+ A Y 
Sbjct: 276 ECSSENLDHGVLVVGYGTKDDQDYWLVKNSWGTTWGDGGYIYMTRNKDNQCGIASSASYP 335

Query: 308 LI 309
           L+
Sbjct: 336 LV 337


>gi|354504280|ref|XP_003514205.1| PREDICTED: cathepsin M-like [Cricetulus griseus]
 gi|344250849|gb|EGW06953.1| Cathepsin M [Cricetulus griseus]
          Length = 333

 Score =  213 bits (543), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 114/304 (37%), Positives = 175/304 (57%), Gaps = 15/304 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY+K+Y  +  + +K+  W+ N K +  +N E +QG  G+T+  N   D+    + K MT
Sbjct: 35  KYEKNYSLE-EEGQKRTVWEENLKLVKLYNAEYKQGKKGFTVEMNAFGDMTGEEFRKMMT 93

Query: 76  RL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            +   +R +R  ++ P  +    +P  +DWR KG++TP   Q  C +C+AFS+A AI+GQ
Sbjct: 94  VIPVQTRRKRKSIQPPMVS---YVPKFVDWRRKGYVTPVKIQGRCNSCWAFSVAGAIEGQ 150

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
           +F+ T  +  LS Q +VDCS   GNLGC  G+    L YVQ   GL  E  YPY+ K+  
Sbjct: 151 MFRKTRRLVSLSPQNLVDCSRPEGNLGCYEGNTYYALKYVQHNRGLEAEATYPYEAKEGP 210

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C++   +    ++ + +   ++E AL   +AT+GPI+V I+A   +F+LY  GIY +  C
Sbjct: 211 CRYHPEHSAARVTDF-MFVSKNEKALMHAVATIGPISVGIDAGHESFKLYKGGIYYEPNC 269

Query: 255 TSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           +S+ +NH++LLVGY         R  W++KN     WG NGYM + R  NN CGIA YA+
Sbjct: 270 SSEVINHSVLLVGYGYEGRESDGRKYWLIKNSHGERWGMNGYMKIARDRNNHCGIATYAI 329

Query: 306 YALI 309
           Y  +
Sbjct: 330 YPRV 333


>gi|443698586|gb|ELT98517.1| hypothetical protein CAPTEDRAFT_128252 [Capitella teleta]
          Length = 324

 Score =  213 bits (543), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 179/300 (59%), Gaps = 13/300 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT- 75
           + K Y  +A D ++ + W+ +   I+ HN EA  G H ++L  N   DL  +H    M+ 
Sbjct: 31  HSKTYATEAEDMRRFI-WERHLNMINQHNIEADLGKHTFSLGMNEYGDL-TQHEYAAMSG 88

Query: 76  -RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            ++  S +  + +      E++ +P  +DWREKG++TP  NQ  CG+C+AFS   +++GQ
Sbjct: 89  YKMAKSSVGSSFLEP----ENLQVPKTVDWREKGYVTPVKNQGQCGSCWAFSSTGSLEGQ 144

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
           +F+ T  +  +S Q +VDCS   GN+GC+GG + N   Y++   G+  E+ YPY+     
Sbjct: 145 VFRKTGRLPSISEQNLVDCSRDEGNMGCSGGLMDNAFTYIKKNMGIDSEKSYPYEAVDGE 204

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C++K+ + V   S +  +P  DE AL+  +A+VGP++V+I+AS  +FQ Y +G+Y +  C
Sbjct: 205 CRYKKSDSVTTDSGFVDIPHGDETALRTAVASVGPVSVAIDASHTSFQFYKTGVYTEANC 264

Query: 255 TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           +S  ++H +L+VGY     ++ W++KN W   WG+ GY+ L R   N+CGIA+ A Y L+
Sbjct: 265 SSTQLDHGVLVVGYGVENGQDYWLVKNSWGASWGEAGYIKLARNHGNQCGIASQASYPLL 324


>gi|410898132|ref|XP_003962552.1| PREDICTED: cathepsin L-like [Takifugu rubripes]
          Length = 335

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 110/304 (36%), Positives = 172/304 (56%), Gaps = 11/304 (3%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ + YR  + + ++   W +N K +  HN  A QG+  Y L     +D+    Y K + 
Sbjct: 33  KFGRSYRTPSEEVQRMQIWLNNRKLVLVHNILADQGIKSYRLGMTQFADMDNEEY-KSLI 91

Query: 76  RLTHSRIRRTLVRSPESN-----ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
            L   R   T      S      E   +P  +DWR+KG++T   +Q+ CG+C+AFS   +
Sbjct: 92  SLGCLRAFNTSAPRRGSAFFRLAEGTHLPTTVDWRDKGYVTGVKDQKQCGSCWAFSATGS 151

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ F+ T ++  LS QQ+VDCS   GN+GC GG +     Y+Q  GG+  E+ YPY+ 
Sbjct: 152 LEGQNFRKTGKLVSLSEQQLVDCSGDYGNMGCNGGLMDYAFKYIQENGGIDTEKSYPYEA 211

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C+FK  N+    + +  +   DE ALK  +AT+GP++V I+AS  +FQLY SG+YD
Sbjct: 212 EDGQCRFKPENVGAKCTGYVDVTVGDEDALKEAVATIGPVSVGIDASHSSFQLYDSGVYD 271

Query: 251 DEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           ++ C+S  ++H +L VGY  ++    W++KN W   WG  GY+ + R  +N+CGIA  A 
Sbjct: 272 EQDCSSQDLDHGVLAVGYGTDNGQDYWLVKNSWGLGWGQEGYIMMSRNKDNQCGIATAAS 331

Query: 306 YALI 309
           Y L+
Sbjct: 332 YPLV 335


>gi|47230018|emb|CAG10432.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 294

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 169/292 (57%), Gaps = 9/292 (3%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL 86
           ++ ++  W SN K +  HN  A QG+  Y L     +D+    Y + ++         + 
Sbjct: 3   EAARRQIWLSNRKLVLVHNILADQGIKSYRLGMTQFADMDNEEYKRLISLGCLGAFNASA 62

Query: 87  VRSPES----NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
            R   +     E   +P  +DWR+KG++T   +Q+ CG+C+AFS   +++GQ ++ T ++
Sbjct: 63  PRKGSAFFRLAEGTPLPTTVDWRDKGYVTGVKDQKQCGSCWAFSATGSLEGQNYRKTGKL 122

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI 202
             LS QQ+VDCS   GN+GC GG + +   Y+Q  GG+  EE YPY+ +   C+FK  NI
Sbjct: 123 VSLSEQQLVDCSGDYGNMGCGGGLMDSAFKYIQENGGIDTEESYPYEAEDGKCRFKPQNI 182

Query: 203 VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHA 262
               + +  +   DE ALK  +AT+GP++V+I+AS  +FQLY SG+YD+  C+S+ ++H 
Sbjct: 183 GAKCTGYVDVTAGDEDALKEAVATIGPVSVAIDASHSSFQLYESGVYDELECSSEDLDHG 242

Query: 263 MLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
           +L VGY  ++    W++KN W   WG  GY+ + R   N+CGIA+ A Y L+
Sbjct: 243 VLAVGYGTDNGQDYWLVKNSWGLGWGQKGYIMMSRNKHNQCGIASMASYPLV 294


>gi|388509526|gb|AFK42829.1| unknown [Lotus japonicus]
          Length = 333

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 110/300 (36%), Positives = 173/300 (57%), Gaps = 8/300 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT- 75
           + K Y   A +  ++L W++N   I  HN E   GLH YTL  N+ +DL    + + M  
Sbjct: 35  FGKQY-STAEEITRRLAWEANVAIIRQHNLEHDLGLHTYTLGLNNYADLTNAEFNQVMNG 93

Query: 76  -RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            R+  S+ +    R+  +   V +P  +DWR KG++TP  +Q  CG+C+AFS   +++GQ
Sbjct: 94  LRVNASQTKSANRRTYVAPVGVELPTSVDWRTKGYVTPIKDQGQCGSCWAFSSTGSLEGQ 153

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
            F  T ++  LS Q + DCS   GN+GC GG +     Y++   G+  E  YPYK     
Sbjct: 154 HFAKTGQLVSLSEQNLTDCSQKQGNMGCNGGLMDQAFTYIKENNGIDTESSYPYKAVDEK 213

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C FK  ++    + ++ +  QDE+AL+  +ATVGPI+V+I+AS  +FQLY SG Y++ AC
Sbjct: 214 CHFKAADVGATDTGYTDIAQQDENALQSAIATVGPISVAIDASHSSFQLYRSGAYNERAC 273

Query: 255 TSDYVNHAMLLVGYT----RNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           ++  ++H +L VGY     ++ +I+KN W   WG  GY+++ R  NN+CGIA  + Y  +
Sbjct: 274 SATQLDHGVLAVGYDSEDGKDYYIVKNSWGTSWGQKGYIWMTRNKNNQCGIATMSTYPTV 333


>gi|348531585|ref|XP_003453289.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 366

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 111/292 (38%), Positives = 169/292 (57%), Gaps = 15/292 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL--- 86
           +K  W +N K +  HN  A QGL  Y L   H +D+    Y + +++        +L   
Sbjct: 78  RKQIWLNNRKHVLMHNILADQGLKSYHLGMTHFADMEHEEYKQLISQSFLGSFNASLPQR 137

Query: 87  ----VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
                R PE  +   +PD +DWR+KG++T   +Q+ CG+C+AFS    ++GQ F+ T ++
Sbjct: 138 GSAFFRLPEGTD---LPDTVDWRDKGYVTEVKDQKICGSCWAFSTTGVLEGQHFRKTGKL 194

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI 202
             LS QQ++DCS   GN GC GGS++    Y+Q  GG+  E  YPY+ K   C++K   I
Sbjct: 195 VSLSEQQLMDCSHSFGNNGCNGGSVKRAFQYIQANGGIDTEASYPYEAKGQQCRYKPDGI 254

Query: 203 VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHA 262
               + +  + P +E ALK  +AT+GPI+V I+AS ++F+ Y SG+YD+  C+   +NH 
Sbjct: 255 GAKCTGYVEVKPSNEDALKEAVATIGPISVGIDASHNSFRFYQSGVYDEPDCSKTVLNHD 314

Query: 263 MLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           +L VGY T N    W++KN W   WGD GY+ + R  +N+CGIA+ A Y L+
Sbjct: 315 VLAVGYGTENGHDYWLIKNSWGIRWGDKGYIKMSRNKSNQCGIASDATYPLV 366


>gi|146152090|gb|ABQ08058.1| cathepsin L [Misgurnus mizolepis]
          Length = 337

 Score =  213 bits (542), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 114/304 (37%), Positives = 171/304 (56%), Gaps = 17/304 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K+Y +K  +  +++ W+ N +KI  HN E   G+H Y L  NH  D++   + + M    
Sbjct: 38  KNYHEK-EEGWRRMIWEKNLRKIQFHNLEHSMGIHTYRLGMNHFGDMNHEEFRQVMNGYK 96

Query: 79  HSRIRR---TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           H   R+   +L   P   E   +P  LDWREKG++TP  +Q +CG+C+AFS   A++GQ+
Sbjct: 97  HKTERKFKGSLFMEPNFLE---VPSKLDWREKGYVTPVKDQGECGSCWAFSTTGAMEGQM 153

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSI 194
           F+   ++  LS Q +VDCS   GN GC GG +     Y++   GL  EE YPY G     
Sbjct: 154 FRKQGKLVSLSEQNLVDCSRPEGNEGCNGGLMDQAFQYIKDNNGLDSEEAYPYLGTDDQP 213

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C +       + + +  +P   EHAL   +A+VGP++V+I+A   +FQ Y SGIY ++ C
Sbjct: 214 CHYDPKYNAANDTGFVDIPSGKEHALMKAVASVGPVSVAIDAGHESFQFYQSGIYFEKEC 273

Query: 255 TSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAV 305
           +S+ ++H +L+VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  A 
Sbjct: 274 SSEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSESWGDKGYIYMAKDRKNHCGIATAAS 333

Query: 306 YALI 309
           Y L+
Sbjct: 334 YPLV 337


>gi|375340657|emb|CBJ56264.1| cathepsin S protein [Dicentrarchus labrax]
          Length = 337

 Score =  213 bits (542), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 111/298 (37%), Positives = 163/298 (54%), Gaps = 6/298 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y+ +  D  ++  W+ N   I  HN EA  GLH Y L  NH+ DL     ++    
Sbjct: 41  HGKKYQTEVEDVSRRELWEKNLMLITMHNLEASMGLHTYELSMNHMGDLTQEEIMQSFAT 100

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L+     +             +PD +DWREKG +T    Q  CG+C+AFS A A++GQ+ 
Sbjct: 101 LSPPTDIQRAASPFAGTTGADVPDTMDWREKGCVTSVKMQGSCGSCWAFSAAGALEGQLA 160

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K+T ++ +LS Q +VDCS   GN GC GG +     YV    G+  +  YPY G+   C+
Sbjct: 161 KTTGKLVDLSPQNLVDCSTKYGNHGCNGGFMHQAFQYVIDNQGIDSDASYPYTGRNGECR 220

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +       + S +S LP  +E ALK  LA +GPI+V+I+A+  TF  Y SG+Y+D  C S
Sbjct: 221 YNSKFRAANCSQYSFLPEGNEGALKEALANIGPISVAIDATRPTFTFYRSGVYNDPNC-S 279

Query: 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
             VNH +L VGY     ++ W++KN W   +GD GY+ + R  N++CGIA Y  Y ++
Sbjct: 280 QKVNHGVLAVGYGTLDGQDYWLVKNSWGKTFGDQGYIRMSRNKNDQCGIALYGCYPIM 337


>gi|344271616|ref|XP_003407633.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 334

 Score =  213 bits (542), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 121/304 (39%), Positives = 165/304 (54%), Gaps = 16/304 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           YKK Y     D ++ + W+ N K I  HNQE  QG HG+T+  N   D+    + + M  
Sbjct: 36  YKKPYAVNEEDWRRAV-WEKNVKMIERHNQEYSQGKHGFTMAMNAFGDMTNEEFRQVMNG 94

Query: 77  LTHSRIRR-TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
             + + ++  L   P       IP  +DW +KG++TP  NQ  CG+C+AFS   A++GQ+
Sbjct: 95  FQNQKHKKGKLFYEPVFGH---IPTSVDWTQKGYVTPVKNQGQCGSCWAFSATGALEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-I 194
           F+ T ++  LS Q +VDCS   GN GC GG + N   YVQ  GGL  EE YPY    +  
Sbjct: 152 FRKTGKLVSLSEQNLVDCSRREGNEGCNGGLMDNAFQYVQDNGGLDSEESYPYLATDTHT 211

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C +K P       +  V  PQ E AL   +ATVGPI+V+I+A   +FQ Y SGIY +  C
Sbjct: 212 CNYK-PECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHESFQFYKSGIYYEPGC 270

Query: 255 TSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAV 305
           +S  ++H +LLVGY            WI+KN W   WG NGY+ + K  NN CGIA  A 
Sbjct: 271 SSKDLDHGVLLVGYGFEGKDSENNKFWIVKNSWGTSWGTNGYVKMAKDQNNHCGIATAAS 330

Query: 306 YALI 309
           Y  +
Sbjct: 331 YPTV 334


>gi|449683741|ref|XP_002155462.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  213 bits (542), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 164/298 (55%), Gaps = 12/298 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y     ++ +   W+ N ++I  HN +       + L  N   D+    +      
Sbjct: 34  HNKAYSHDGEETVRYTIWKDNERRIREHNLQGGD----FLLEMNQFGDMTNNEFKDFNGY 89

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L+H  +  +   +P S    + PD +DWR +G++TP  +Q  CG+C+AFS   +++GQ F
Sbjct: 90  LSHKHVSGSTFLTPNS---FVAPDSVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQNF 146

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K T ++  LS Q +VDCS   GN GC GG + N   Y++   G+  E  YPY  K   C 
Sbjct: 147 KKTGKLVSLSEQNLVDCSTAYGNNGCNGGLMDNAFTYIKENNGIDSEASYPYTAKDGKCA 206

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           F +PN+    + +  +P  DE+ LK  +A+VGPI+V+I+AS  +FQ Y  G+Y++  C+S
Sbjct: 207 FTKPNVAATDTGFVDIPSGDENKLKEAVASVGPISVAIDASHFSFQFYRKGVYNERKCSS 266

Query: 257 DYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
             ++H +L+VGY   S    W++KN W+  WGD GY+ + R   N+CGIA  A Y L+
Sbjct: 267 TELDHGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMSRNAKNQCGIATNASYPLV 324


>gi|344271892|ref|XP_003407771.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 334

 Score =  213 bits (542), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 116/304 (38%), Positives = 167/304 (54%), Gaps = 16/304 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           YKK Y     D ++ + W+ N K I  HNQE  QG HG+T+  N   D+    + + M  
Sbjct: 36  YKKPYAANEEDWRRAV-WEKNMKMIERHNQEYSQGKHGFTMTMNAFGDMTNEEFRQVMNG 94

Query: 77  L-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
                RI+  L+  P       IP  +DW +KG++TP  +Q  CG+C+AFS   A++GQ+
Sbjct: 95  FQNQKRIQGKLLYEPVFGH---IPKSVDWTQKGYVTPVKDQGQCGSCWAFSATGALEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSI 194
           F+ T ++  LS Q +VDCS   GN GC GG + N   Y++  GGL  EE YPY    +  
Sbjct: 152 FRKTGKLVSLSEQNLVDCSRREGNEGCNGGLMDNAFQYIKDNGGLDSEESYPYTAMDKQD 211

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C++       + + +  +PPQ E AL   +ATVGPI+V+++A   +FQ Y SGIY D  C
Sbjct: 212 CRYNPKYSAANDTGFVDIPPQ-EKALMKAVATVGPISVAVDAGHESFQFYKSGIYYDSNC 270

Query: 255 TSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAV 305
           +S  +NH +L+VGY            W++KN W   WG +GY+ + K  NN CGIA  A 
Sbjct: 271 SSKDLNHGVLVVGYGFEGIDSANNRYWLVKNSWGTGWGTDGYIKMAKDRNNHCGIATAAS 330

Query: 306 YALI 309
           Y  +
Sbjct: 331 YPTV 334


>gi|118404242|ref|NP_001072435.1| cathepsin K precursor [Xenopus (Silurana) tropicalis]
 gi|113197688|gb|AAI21683.1| hypothetical protein MGC147539 [Xenopus (Silurana) tropicalis]
          Length = 331

 Score =  213 bits (542), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 166/302 (54%), Gaps = 8/302 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ Y K Y  +  +  ++L W+ N K I  HN E  +GLH Y +  NHL D+     ++ 
Sbjct: 32  KRTYHKQYNGQMDEGLRRLIWEKNFKMITAHNLEYSEGLHTYEMAMNHLGDMTSEEVVRT 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           MT L  H R R T   S ++     IPD +D+R+KG++TP  NQ  CG+C+AFS   A++
Sbjct: 92  MTGLWVHRRNRSTNFTSEDNTAQEKIPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALE 151

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+ K   ++ +LS Q +VDC  +  N GC GG + N   YV+   G+  E  YPY G+ 
Sbjct: 152 GQLKKKKGKLVDLSPQNLVDC--VKKNDGCGGGYMTNAFEYVRDNKGIDSENAYPYVGED 209

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C +           +  +    E ALK  +  VGP++V I+A   +FQ Y+ G+Y D+
Sbjct: 210 QECMYNATGKAASCKGFKEVQEGSEKALKKAVGLVGPVSVGIDAGLSSFQFYSKGVYYDK 269

Query: 253 ACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYA 307
            C ++ +NHA+L VGY        WI+KN W   WG+ GY+ + R  +N CGI++ A Y 
Sbjct: 270 DCNAENINHAVLAVGYGTQKKTKYWIVKNSWGEDWGNKGYILMAREKDNACGISSLASYP 329

Query: 308 LI 309
           ++
Sbjct: 330 VM 331


>gi|380236892|emb|CBK52289.1| cathepsin S protein [Dicentrarchus labrax]
          Length = 337

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/298 (37%), Positives = 164/298 (55%), Gaps = 6/298 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y+ +  D  ++  W+ N   I  HN EA  GLH Y L  NH+ DL     ++    
Sbjct: 41  HGKKYQTEVEDVSRRELWEKNLMLITMHNLEASMGLHTYELSMNHMGDLTQEEIMQSFAT 100

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L+     +             +PD +DWREKG +T    Q  CG+C+AFS A A++GQ+ 
Sbjct: 101 LSPPTDIQRAASPFAGTTGADVPDTMDWREKGCVTSVKMQGSCGSCWAFSAAGALEGQLA 160

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K+T ++ +LS Q +VDCS   GN GC GG + +   YV    G+  +  YPY G+   C+
Sbjct: 161 KTTGKLVDLSPQNLVDCSTKYGNHGCNGGLMHHAFQYVIDNQGIDSDASYPYTGRNGECR 220

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +       + S +S LP  +E ALK  LA +GPI+V+I+A+  TF  Y SG+Y+D  C S
Sbjct: 221 YNSKFRAANCSQYSFLPEGNEGALKEALANIGPISVAIDATRPTFTFYRSGVYNDPNC-S 279

Query: 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
             VNH +L VGY     ++ W++KN W   +GD GY+ + R  N++CGIA Y  Y ++
Sbjct: 280 QKVNHGVLAVGYGTLDGQDYWLVKNSWGKTFGDQGYIRMSRNKNDQCGIALYGCYPIM 337


>gi|327289213|ref|XP_003229319.1| PREDICTED: cathepsin S-like [Anolis carolinensis]
          Length = 333

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 167/303 (55%), Gaps = 9/303 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +KKY K+Y+ K  +  +++ W+ N + +  HN E   GLH Y L  NHL D+        
Sbjct: 33  KKKYNKEYQNKEEEGVRRVIWEKNLRFVMLHNLEQSLGLHSYELGMNHLGDMTSEEVTAL 92

Query: 74  MT--RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           MT  ++  S+ R + +       S   PD +DWREKG +T   NQ  CG+C+AFS   A+
Sbjct: 93  MTGLKIPVSQSRNSTLYWARQGASA--PDTVDWREKGCVTNVKNQGSCGSCWAFSAVGAL 150

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           + Q+   T  +  LS Q +VDCS   GN GC GG +     YV +  G+  E  YPY G+
Sbjct: 151 ECQLKLKTGNLVSLSPQNLVDCSSAFGNHGCNGGYISAAFQYVIYNNGIDSEASYPYTGQ 210

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S +  LP  +E ALK  +A  GP++V+I+AS  +F L+  G+YDD
Sbjct: 211 SGTCRYNLQGRAATCSRYVDLPSGNEAALKDAVANFGPVSVAIDASRPSFFLFRKGVYDD 270

Query: 252 EACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CTS ++NH +L+VGY        W++KN W   +GD GY+ + R  +NRCGIA+   Y
Sbjct: 271 PSCTSAHINHGVLVVGYGTEDGIDYWLVKNSWGVSFGDQGYIKIARNHDNRCGIASQCTY 330

Query: 307 ALI 309
            L+
Sbjct: 331 PLM 333


>gi|225719058|gb|ACO15375.1| Cathepsin L1 precursor [Caligus clemensi]
          Length = 326

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 110/283 (38%), Positives = 162/283 (57%), Gaps = 10/283 (3%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           +Q N   I  HN+E +QG H Y L  NH  DL    ++ E +      +    V + ++N
Sbjct: 47  FQENSLMITQHNEEYRQGFHTYILGMNHFGDLLHSEFL-ERSNGFQGGVSGGDVFTFDTN 105

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
             V  P + +W  KG +TP  +Q  CG+C+AFS   +++GQIF    ++  LS QQ+VDC
Sbjct: 106 APV--PSYANWTAKGAVTPVKDQGKCGSCWAFSATGSVEGQIFLKKKKLMSLSEQQLVDC 163

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GNLGC GG + N   Y     G+  E+ YPY  K + CK+K+   V  ISS+  + 
Sbjct: 164 SGDEGNLGCGGGLMDNAFKYFIANKGIANEKSYPYTAKDNDCKYKKSMSVATISSFKDVK 223

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
            +DE  LK+ +A VGP++V+I+AS   FQ Y SG+Y DE C+S+ ++H +L VGY  +  
Sbjct: 224 HKDEDQLKMAVANVGPVSVAIDASSSKFQFYESGVYYDENCSSEVLDHGVLAVGYGTDKK 283

Query: 273 -----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
                W++KN W+  WG NGY+ + R  +N CGIA  A Y ++
Sbjct: 284 SGMDFWLVKNSWAASWGLNGYIKMARNKDNNCGIATMASYPIV 326


>gi|391328505|ref|XP_003738729.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 323

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 173/302 (57%), Gaps = 7/302 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           +K + K Y       +++L ++S   KI+ HN     GL  Y +  N  +D+    +   
Sbjct: 23  KKVHGKSYGHDEEHFRRQLFYKS-VAKINAHNLRHDLGLTTYRMGLNKFTDMTSEEFRNF 81

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           +  +   ++ +R   R  +      +P  +DWREKG++TP  NQ  CG+C+AFS   +++
Sbjct: 82  KGLKFDATKTKRNGTRFQKELLGEALPTQVDWREKGYVTPVKNQGQCGSCWAFSTTGSLE 141

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ FK+T ++  LS Q +VDCS + GN GC GG + N   Y+Q  GG+  EE YPY GK 
Sbjct: 142 GQHFKATGKLVSLSEQNLVDCSRVEGNNGCNGGLMDNGFTYIQQNGGIDTEESYPYTGKD 201

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C F   ++   +  +  +P +DE AL+  +A+VGP++V+I+AS  +FQ Y  G+YD+ 
Sbjct: 202 GDCAFNENSVGARVKGFVDVPQRDEAALQAAVASVGPVSVAIDASNDSFQYYKEGVYDEP 261

Query: 253 ACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
           +C+   ++H +L+VGY T N    W++KN W   WG +GY+ + R   N+CGIA+ A Y 
Sbjct: 262 SCSFSQLDHGVLVVGYGTENGVDYWLVKNSWGPTWGQDGYIKMMRNKENQCGIASMASYP 321

Query: 308 LI 309
            +
Sbjct: 322 TV 323


>gi|355681656|gb|AER96815.1| Cathepsin L precursor [Mustela putorius furo]
          Length = 331

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/287 (38%), Positives = 164/287 (57%), Gaps = 14/287 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL-THSRIRRTLVR 88
           ++  W+ N K I  HNQE  QG H +T+  N   DL    + + M  L +  R    + +
Sbjct: 48  RRAVWEKNLKVIKQHNQEYSQGKHSFTMAMNAFGDLTNEEFKQVMNGLKSQKRKEGNVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
           +P   E+   P  +DWR+KG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q
Sbjct: 108 APPFAET---PSSVDWRKKGYVTPVKNQGPCGSCWAFSATGALEGQMFRKTKRLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC+GG +     YV+  GGL  EE YPY+ +   CK+K      + + 
Sbjct: 165 NLVDCSQAEGNEGCSGGLMDYAFQYVKDNGGLDSEESYPYRAQDESCKYKPEQSAANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           +  + P++E +LK+ +ATVGPI+ +I+AS  TFQ Y  GIY D  C+S+ ++H +L+VGY
Sbjct: 225 FMDIHPEEE-SLKLAVATVGPISAAIDASLSTFQFYHKGIYYDPDCSSENLDHGILVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
                       WI+KN W   WG  GY+ + K  +N CGIA  A +
Sbjct: 284 GSQGEDSEKQKYWIVKNSWGTDWGTQGYILMAKDRDNHCGIATAASF 330


>gi|301789679|ref|XP_002930256.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
 gi|281343339|gb|EFB18923.1| hypothetical protein PANDA_020645 [Ailuropoda melanoleuca]
          Length = 334

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/291 (40%), Positives = 162/291 (55%), Gaps = 15/291 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN+E  QG HG+T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIDLHNREYSQGQHGFTMAMNAFGDMTNEEFRQVMNGFRNQKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E   IP  +DW  KG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFAE---IPKSVDWTLKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-ICKFKRPNIVVDIS 207
            +VDCS   GN GC GG + N   YV+  GGL  EE YPY G  +  CK+K P       
Sbjct: 165 NLVDCSRSQGNEGCNGGLMDNAFQYVKENGGLDSEESYPYLGTDTDSCKYK-PECSAAND 223

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
           +  V  PQ E AL   +ATVGPI+V+I+A   +FQ Y SGIY D  C+S  ++H +L+VG
Sbjct: 224 TGFVDIPQREKALMKAVATVGPISVAIDAGHQSFQFYKSGIYYDPDCSSKDLDHGVLVVG 283

Query: 268 Y--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y            WI+KN W   WG NGY+ + K  NN CGIA  A Y  +
Sbjct: 284 YGFEGTDSNNNKFWIVKNSWGPEWGTNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|34559455|gb|AAQ75437.1| cathepsin L-like protease [Helicoverpa armigera]
 gi|338855117|gb|AEJ31938.1| cathepsin L-like protease [Helicoverpa assulta]
          Length = 341

 Score =  212 bits (540), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/324 (34%), Positives = 176/324 (54%), Gaps = 19/324 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW    +   K+Y  +   K    + K++ ++ H+ I  HNQ  +QG   Y LR N
Sbjct: 22  LVREEWSAFKLEHSKRYDSEVEDKF---RMKIYLENKHR-IAKHNQRFEQGAVSYKLRPN 77

Query: 61  HLSDLHPRHYIKEMT---------RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFIT 111
             +D+    ++  M          +  H + R +   +  +   V  PDH+DWR+KG +T
Sbjct: 78  KYADMLSHEFVHVMNGFNKTLKHPKAVHGKGRESRPATFIAPAHVTYPDHVDWRKKGAVT 137

Query: 112 PDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTL 171
              +Q  CG+C+AFS   A++GQ F+ T  +  LS Q ++DCS   GN GC GG + N  
Sbjct: 138 EVKDQGKCGSCWAFSTTGALEGQHFRKTGYLVSLSEQNLIDCSAAYGNNGCNGGLMDNAF 197

Query: 172 NYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIA 231
            Y++  GG+  E+ YPY+G    C++   N   D   +  +P  DE  L   +ATVGP++
Sbjct: 198 KYIKDNGGIDTEKAYPYEGVDDKCRYNAKNSGADDVGFVDIPQGDEEKLMQAVATVGPVS 257

Query: 232 VSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDN 286
           V+I+AS  +FQ Y+ G+Y DE C+S  ++H +++VGY  +      W++KN W   WGD 
Sbjct: 258 VAIDASQESFQFYSDGVYYDENCSSTDLDHGVMVVGYGTDEQGGDYWLVKNSWGRTWGDL 317

Query: 287 GYMYLKRG-NNRCGIANYAVYALI 309
           GY+ + R  NN CGIA+ A Y L+
Sbjct: 318 GYIKMARNKNNHCGIASSASYPLV 341


>gi|348513412|ref|XP_003444236.1| PREDICTED: cathepsin S-like [Oreochromis niloticus]
          Length = 328

 Score =  212 bits (540), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/303 (38%), Positives = 169/303 (55%), Gaps = 11/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K +KK Y  +  +  ++L W+ N K I+ HN EA   LH Y L  NH  D+ P   ++ 
Sbjct: 30  KKTHKKVYSHQIEEWGRRLIWEMNLKMINLHNLEASLNLHTYELAINHFGDMTP---VEI 86

Query: 74  MTRLTHSRIRRTL--VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
              LT +R+   L  V +     +  +P  +DWR+KG +TP   Q  CGAC+AFS A A+
Sbjct: 87  TGTLTGTRVPSDLEMVAASSIKVNASLPASVDWRDKGLVTPVKTQGSCGACWAFSAAGAL 146

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+ KST  +  LS Q ++DC+   GN GC GG +     YV    G+  E+ YPY G+
Sbjct: 147 EGQLKKSTGILRSLSTQNLIDCTTDYGNRGCNGGLIARAFKYVVDNQGIASEDAYPYIGR 206

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
            + CK+       + S +  LP  DE ALK  +A VGP+AV+I+AS   F  Y  G+Y D
Sbjct: 207 HNQCKYNPLYRAANCSGYYCLPRGDEFALKEAVALVGPVAVAIDASRPQFHFYHRGVYMD 266

Query: 252 EACTSDYVNHAMLLVGYTR----NSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             CT   VNH  L+VGY R    + W++KN W   +G+ GY+ + R  NN+CGI ++A +
Sbjct: 267 NTCTQK-VNHGSLVVGYGREKGQDYWLVKNSWGVQFGEEGYIKMARNRNNQCGITHHACF 325

Query: 307 ALI 309
             +
Sbjct: 326 PFV 328


>gi|9931986|ref|NP_064680.1| cathepsin R precursor [Mus musculus]
 gi|23813621|sp|Q9JIA9.1|CATR_MOUSE RecName: Full=Cathepsin R; Flags: Precursor
 gi|9623188|gb|AAF90051.1|AF245399_1 cathepsin R [Mus musculus]
 gi|12837970|dbj|BAB24023.1| unnamed protein product [Mus musculus]
 gi|12852278|dbj|BAB29345.1| unnamed protein product [Mus musculus]
 gi|16445015|gb|AAK00507.1| cathepsin R precursor [Mus musculus]
 gi|71682221|gb|AAI00339.1| Cathepsin R [Mus musculus]
 gi|148709367|gb|EDL41313.1| cathepsin R [Mus musculus]
          Length = 334

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/306 (38%), Positives = 163/306 (53%), Gaps = 18/306 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  K  +  K++ W+   K I  HN+E   G +G+T++ N   D     + K M 
Sbjct: 35  KYNKSYSLK-EEKLKRVVWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMI 93

Query: 76  RL---THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
            +   TH   +  + R   S    ++P  +DWR+KG++TP   Q DC AC+AF++  AI+
Sbjct: 94  EISVWTHREGKSIMKREAGS----ILPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
            Q    T ++  LS+Q +VDCS   GN GC GG   N   YV   GGL  E  YPY+GK 
Sbjct: 150 AQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKD 209

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C++   N   +I+ +  L PQ E  L   +AT+GPI   I+AS  +F+ Y  GIY + 
Sbjct: 210 GPCRYNPKNSKAEITGFVSL-PQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEP 268

Query: 253 ACTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANY 303
            C+SD V H +L+VGY            W++KN W   WG  GYM L K  NN CGIA+Y
Sbjct: 269 NCSSDTVTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKDKNNHCGIASY 328

Query: 304 AVYALI 309
           A Y  I
Sbjct: 329 AHYPTI 334


>gi|61661067|gb|AAX51229.1| cathepsin S cysteine protease [Paralichthys olivaceus]
          Length = 337

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/302 (38%), Positives = 168/302 (55%), Gaps = 9/302 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K Y  +  D +++  W+ N   I  HN EA  GL  Y L  NH+ DL     ++ 
Sbjct: 39  KKSHGKTYPNEVEDVRRRELWERNLMLITKHNLEASMGLQTYDLSMNHMGDLTTEEIMQS 98

Query: 74  MTRLTH-SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
              LT  + I+R    +P       +P  +DWR +G +T    Q  CG+C+AFS A A++
Sbjct: 99  YATLTPPADIQR--APAPFVGSGADVPVSVDWRLQGCVTSVKMQGSCGSCWAFSAAGALE 156

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+ K+T ++ +LS Q +VDCS+  GN GC GG +     YV    G+  E  YPY+G+ 
Sbjct: 157 GQLAKTTGKLVDLSPQNLVDCSLKYGNKGCNGGFMDRAFQYVIDNKGIDSEASYPYRGQL 216

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C +       + S +S LP  DE ALK  LAT+GPI+V+I+A+  TF  Y SG+Y+D 
Sbjct: 217 QQCSYNPSYRAANCSRYSFLPEGDEGALKNALATIGPISVAIDATRPTFAFYRSGVYNDP 276

Query: 253 ACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            CT   VNH +L VGY   S    W++KN W   +GD GY+ + R  N++CGIA Y  Y 
Sbjct: 277 TCTQR-VNHGVLAVGYGTESGQDYWLVKNSWGTSFGDKGYIRMSRNKNDQCGIALYCSYP 335

Query: 308 LI 309
           ++
Sbjct: 336 IM 337


>gi|84028184|sp|Q9R014.2|CATJ_MOUSE RecName: Full=Cathepsin J; AltName: Full=Cathepsin L-related
           protein; AltName: Full=Cathepsin P; AltName:
           Full=Catlrp-p; Flags: Precursor
 gi|5306071|gb|AAD41898.1|AF158182_1 preprocathepsin P [Mus musculus]
 gi|12838143|dbj|BAB24099.1| unnamed protein product [Mus musculus]
 gi|74199838|dbj|BAE20748.1| unnamed protein product [Mus musculus]
 gi|74355544|gb|AAI03770.1| Cathepsin J [Mus musculus]
 gi|148709363|gb|EDL41309.1| cathepsin J, isoform CRA_a [Mus musculus]
          Length = 334

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/306 (36%), Positives = 172/306 (56%), Gaps = 15/306 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + KY K Y  K  ++ ++  W+ N + I  HN+E   G + +T++ N   D     + K 
Sbjct: 33  KTKYAKSYSPK-EEALRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKS 91

Query: 74  MTRLTHSRIRRTLVRSPESNE-SVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           +  +    I   +      N  S+ +PD+ DWRE+G++TP  NQ  CG+C+AF+ A AI+
Sbjct: 92  IDNIP---IPAAMTDPHAQNHVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIE 148

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+F  T  +  LS+Q ++DCS   GN GC  G+      YV    GL  E  YPY+GK 
Sbjct: 149 GQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKD 208

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C+++  N   +I+ +  LPP +E  L V +A++GP++ +I+AS  +F+ Y  GIY + 
Sbjct: 209 GPCRYRSENASANITDYVNLPP-NELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEP 267

Query: 253 ACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
            C+S +VNHA+L+VGY          N W++KN W   WG NGYM + +  NN CGIA+ 
Sbjct: 268 NCSSYFVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQIAKDHNNHCGIASL 327

Query: 304 AVYALI 309
           A Y  I
Sbjct: 328 ASYPNI 333


>gi|221090861|ref|XP_002167224.1| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 177/314 (56%), Gaps = 16/314 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + ++ WI   ++  K Y  D      ++ +   W+ N ++I  HN +       + L+ N
Sbjct: 22  VKDESWIQWKMYHNKVYSHD----GEETVRYTIWKDNERRIREHNLKGGD----FLLKMN 73

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCG 120
              D+    +      L+H  +  +   +P +    + PD +DWR +G++TP  +Q  CG
Sbjct: 74  QFGDMTNSEFKAFNGYLSHKHVNGSTFLTPNN---FVAPDTVDWRNEGYVTPVKDQGQCG 130

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+AFS   +++GQ FK T ++  LS Q +VDCS   GN GC GG + N   Y++   G+
Sbjct: 131 SCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSTAYGNNGCNGGLMDNAFTYIKENKGI 190

Query: 181 MKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
             E  YPY  +   C FK+P++    + +  LP  +E+ LK  +A+VGPI+V+I+AS  +
Sbjct: 191 DSEASYPYTAEDGKCVFKKPSVAATDTGFVDLPEGNENKLKEAVASVGPISVAIDASHES 250

Query: 241 FQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKR-GN 295
           FQ Y+SG+Y++ +C+S  ++H +L+VGY   S    W++KN W+  WGD GY+ ++R   
Sbjct: 251 FQFYSSGVYNEPSCSSTELDHGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMRRNAK 310

Query: 296 NRCGIANYAVYALI 309
           N+CGIA  A Y L+
Sbjct: 311 NQCGIATKASYPLV 324


>gi|33242880|gb|AAQ01144.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 181/318 (56%), Gaps = 15/318 (4%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           NKEW +  +    ++ K Y  +A +  ++  ++ N  KI  HN  A  G+H YTL  N  
Sbjct: 21  NKEWEMWKL----QHGKQYETEAEEYSRRFIFEKNTVKIAEHNIRASLGMHSYTLAMNKF 76

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCG 120
            D+H   + + +       +++ L+ S   +++++  +P  +DWR    ++   +Q +CG
Sbjct: 77  GDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDNDDNGTLPKSVDWRNSHMVSEVKDQGECG 136

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+AFS   +++GQ    T ++ +LS QQ+VDCS   GN GC GG +     Y++  GGL
Sbjct: 137 SCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANGGL 196

Query: 181 MKEEDYPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
             EE YPY       CKF   ++   +  +  +   +EHALK  +ATVGP++V+I+A   
Sbjct: 197 DTEESYPYTATDDKPCKFDNSSVGATLIGYKDVKSSNEHALKRAVATVGPVSVAIDAGHE 256

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY---TRNS----WILKNWWSHHWGDNGYMYLK 292
           +FQ Y+SG+YD+  C+++ ++H +L+VGY     NS    WI+KN W  +WGD GY+ + 
Sbjct: 257 SFQFYSSGVYDEPQCSTEQLDHGVLVVGYGAMNDNSHQAFWIVKNSWGPNWGDQGYIMMS 316

Query: 293 RG-NNRCGIANYAVYALI 309
           R  NN+CGIA  A Y L+
Sbjct: 317 RNKNNQCGIATSASYPLV 334


>gi|346466067|gb|AEO32878.1| hypothetical protein [Amblyomma maculatum]
          Length = 358

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/302 (36%), Positives = 169/302 (55%), Gaps = 13/302 (4%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K+Y  +  +  +   +  N  KI  HN++       Y L  N   DL    ++   TR  
Sbjct: 59  KEYHSETEEYYRLKIYMENRLKIARHNEKYANNKASYKLAMNEFGDLLHHEFVS--TRNG 116

Query: 79  HSRIRRTLVRS------PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
             R  R+  R       PE  E   +P  +DWR+KG +TP  NQ  CG+C+AFS   +++
Sbjct: 117 FKRNYRSTPREGSFYIEPEGIEDKHLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLE 176

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F+ T  +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E  YPY G  
Sbjct: 177 GQHFRKTGRMVSLSEQNLVDCSGKFGNNGCEGGLMDNAFKYIKANGGIDTELSYPYNGTD 236

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
            IC F++ ++    + +  +P  +E  LK  +ATVGP++V+I+AS  +FQ Y+ G+YD+ 
Sbjct: 237 GICHFEKSDVGATDTGFVDIPEGNEQLLKKAVATVGPVSVAIDASHESFQFYSQGVYDEP 296

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            C+S+ ++H +L+VGY     ++ W++KN W   WGD+GY+Y+ R   N+CGIA+ A Y 
Sbjct: 297 ECSSESLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDDGYIYMTRNKENQCGIASSASYP 356

Query: 308 LI 309
           L+
Sbjct: 357 LV 358


>gi|185135439|ref|NP_001117777.1| procathepsin L precursor [Oncorhynchus mykiss]
 gi|14582899|gb|AAK69706.1|AF358668_1 procathepsin L [Oncorhynchus mykiss]
          Length = 338

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/293 (37%), Positives = 163/293 (55%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT---RLTHSRIRRTL 86
           +++ W+ N KKI  HN E   G H Y L  NH  D+    + + M    + T  + + +L
Sbjct: 49  RRMVWEKNLKKIEIHNLEHTMGKHSYRLGMNHFGDMTNEEFRQTMNGYKQTTERKFKGSL 108

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P     +  P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ F+ T ++  LS
Sbjct: 109 FMEPNY---LQAPKAVDWREKGYVTPVKDQGSCGSCWAFSTTGAMEGQQFRKTGKLVSLS 165

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y+Q   GL  EE YPY G  +  C +K      +
Sbjct: 166 EQNLVDCSRPEGNEGCNGGLMDQAFQYIQDNAGLDTEESYPYVGTDEDPCHYKPEFSAAN 225

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   EHA+   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L+
Sbjct: 226 ETGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYESGIYYEKECSSEELDHGVLV 285

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  + Y L+
Sbjct: 286 VGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATASSYPLV 338


>gi|149755226|ref|XP_001494409.1| PREDICTED: cathepsin L1-like [Equus caballus]
          Length = 334

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/291 (40%), Positives = 166/291 (57%), Gaps = 15/291 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N + I  HNQE  QG HG+T+  N   D+    + + M    + + ++  V  
Sbjct: 48  RRAVWEKNMRMIELHNQEYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGRVFL 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E   +P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFLE---VPKTVDWREKGYVTPVKNQGPCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ-SICKFKRPNIVVDIS 207
            +VDCS   GN GC GG + N   YV+  GGL  EE YPY  K+ + C +K P       
Sbjct: 165 NLVDCSRAEGNQGCNGGLMDNAFQYVKDNGGLDSEESYPYLAKEGNNCNYK-PEYSAAND 223

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
           +  V  PQ E AL   +ATVGPI+V+I+A   +FQ Y SGIY D  C+S  ++H +L+VG
Sbjct: 224 TGYVDIPQKEKALMKAVATVGPISVAIDAGHESFQFYKSGIYYDPDCSSKDLDHGVLVVG 283

Query: 268 Y---TRNS-----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y    R+S     WI+KN W   WG NGY+ + K  NN CGIA  A Y  +
Sbjct: 284 YGFEGRDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|346469447|gb|AEO34568.1| hypothetical protein [Amblyomma maculatum]
          Length = 333

 Score =  211 bits (538), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 106/300 (35%), Positives = 173/300 (57%), Gaps = 7/300 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y+    +  +   +  N   I  HN +  +GL  Y L  N  +DL P  ++K M  
Sbjct: 34  HKKTYKSNVEELLRFKIFTENSLFIAKHNVKYAKGLVSYKLGINQFADLLPHEFVKMMNG 93

Query: 77  LTHSRI--RRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
               R+  R +    P +     +P  +DWR+KG +TP  +Q  CG+C+AFS   +++GQ
Sbjct: 94  YQGKRLAGRGSTYLPPANLNDSSLPKTVDWRKKGAVTPVKDQGQCGSCWAFSSTGSLEGQ 153

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
            F  T ++  LS Q +VDCS   GN GC GG + N+ NY++  GG+  E+ YPY+ +   
Sbjct: 154 HFLKTGKLVSLSEQNLVDCSSAYGNQGCNGGLMDNSFNYIKANGGIDTEDSYPYEAEDGD 213

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C++K+ ++    + +  +    E  L+  +ATVGP++V+I+AS  +FQLY+ G+YD+  C
Sbjct: 214 CRYKKEDVGATDTGFVDIKEGSEKDLQKAVATVGPVSVAIDASQQSFQLYSEGVYDEPNC 273

Query: 255 TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           +S+ ++H +L VGY     +  W++KN W+  WG +GY+ + R  NN+CGIA+ A Y L+
Sbjct: 274 SSESLDHGVLAVGYGVKNGKKYWLVKNSWAETWGQDGYILMSRDKNNQCGIASSASYPLV 333


>gi|261289811|ref|XP_002611767.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
 gi|229297139|gb|EEN67777.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
          Length = 336

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 182/320 (56%), Gaps = 17/320 (5%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           NKEW +  +    ++ K Y  +A +  ++  ++ N  KI  HN  A  G+H YTL  N  
Sbjct: 21  NKEWEMWKL----QHGKQYETEAEEYSRRFTFEKNTIKIAEHNIRASLGMHSYTLAMNKF 76

Query: 63  SDLHPRHYIKEMTR--LTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQED 118
            D+H   + + +    L   ++ + L+ S   +++++  +P  +DWR    ++   +Q +
Sbjct: 77  GDMHHEEFHQRIMGGCLKIVKVNKPLLGSEVGDNDDNGTLPKSVDWRNSAMVSEVKDQGE 136

Query: 119 CGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAG 178
           CG+C+AFS   +++GQ    T ++ +LS QQ+VDCS   GN GC GG +     Y++  G
Sbjct: 137 CGSCWAFSTTGSLEGQHANKTGKLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANG 196

Query: 179 GLMKEEDYPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
           GL  EE YPY       CKF   ++   +  +  +   +EHALK  +ATVGPI+V+I+A 
Sbjct: 197 GLDTEESYPYTATDDKPCKFDNSSVGATLIGYKDVKSGNEHALKRAVATVGPISVAIDAG 256

Query: 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGY---TRNS----WILKNWWSHHWGDNGYMY 290
             +FQ Y+SG+YD+  C+S+ ++H +L+VGY     NS    WI+KN W  +WGD GY+ 
Sbjct: 257 HESFQFYSSGVYDEPQCSSEQLDHGVLVVGYGAMNDNSHQAFWIVKNSWGPNWGDQGYIM 316

Query: 291 LKRG-NNRCGIANYAVYALI 309
           + R  +N+CGIA  A Y L+
Sbjct: 317 MSRNKDNQCGIATSASYPLV 336


>gi|161408097|dbj|BAF94152.1| cathepsin L-like cysteine protease 2 [Plautia stali]
          Length = 334

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 177/311 (56%), Gaps = 14/311 (4%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   +K ++K+Y  +  +S +K  +  N K+I  HN   +QG   + L+ NHL+D+    
Sbjct: 27  FTLFKKFHRKEYDNELEESYRKKIFLENKKRIEKHNSRYKQGKVSFKLKLNHLADMLIHE 86

Query: 70  Y------IKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACY 123
           Y        + ++  +++++      P     V +   +DWR KG +TP  NQ  CG+C+
Sbjct: 87  YSDVYLGFNKSSKANNNKLQSYTFIPPAH---VTLNKEVDWRTKGAVTPVKNQGHCGSCW 143

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKE 183
           AFS   A++GQ F+ T ++  LS Q +VDCS   GN GC GG + N   Y++   G+  E
Sbjct: 144 AFSTTGALEGQNFRKTGKLVSLSEQNLVDCSGSYGNNGCEGGLMDNAFQYIKENHGIDTE 203

Query: 184 EDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
           + YPY+G+   C+F++ +I    S +  +   DE AL   +AT+GPI+V+I+AS  +FQ 
Sbjct: 204 KSYPYEGEDETCRFRKTSIGATDSGFVDITQGDEEALMQAVATIGPISVAIDASHQSFQF 263

Query: 244 YASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRC 298
           Y+ G+Y +  C+S+ ++H +L+VGY     +  W++KN W   WGD GY+ + R  +N C
Sbjct: 264 YSEGVYYEPECSSENLDHGVLVVGYGVEDNQKYWLVKNSWGTQWGDGGYIKMARDQDNNC 323

Query: 299 GIANYAVYALI 309
           GIA  A Y L+
Sbjct: 324 GIATQASYPLV 334


>gi|444514070|gb|ELV10520.1| Cathepsin L1 [Tupaia chinensis]
          Length = 450

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 112/290 (38%), Positives = 166/290 (57%), Gaps = 21/290 (7%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W+ N K I  HN E   G HG+T+  N   D+    + + M    + + +   V  
Sbjct: 172 RRAVWEKNMKMIEMHNHEYSNGKHGFTMGMNAFGDMTNEEFRQVMNGFRNQKQKSGKV-- 229

Query: 90  PESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
              +  +L+  P  +DWREKGF+TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS 
Sbjct: 230 --FHAPLLLQAPKSVDWREKGFVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLISLSE 287

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDIS 207
           Q +VDCS   GNLGC GG + N   Y++  GGL  EE YPYKG    C++K    V + +
Sbjct: 288 QNLVDCSRRQGNLGCQGGLMDNAFQYIKDNGGLDSEESYPYKGMDGTCQYKAEWAVANDT 347

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
            +       E AL   +A+VGPI+V+I+A   +FQ Y  GIY +  C+S+ ++H +L+VG
Sbjct: 348 GF-------EKALMKAVASVGPISVAIDAGHASFQFYKDGIYYEPDCSSENLDHGVLVVG 400

Query: 268 Y---TRNS----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y    RNS    W++KN W   WG NGY+ + K  NN CG+A+ A Y ++
Sbjct: 401 YGVEKRNSNDKYWLIKNSWGEQWGANGYVKIAKDRNNHCGVASAASYPVV 450


>gi|149755237|ref|XP_001495795.1| PREDICTED: cathepsin L1-like [Equus caballus]
          Length = 339

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/288 (40%), Positives = 163/288 (56%), Gaps = 17/288 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL---THSRIRRTL 86
           ++  W+ N + I  HNQE  QG HG+T+  N   D+    + + M  L   TH + R  +
Sbjct: 48  RRAVWEKNMRMIELHNQEYSQGKHGFTMAMNAFGDMTNEEFRQVMNGLHNQTHKKGR--V 105

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
            R P S E   +P  +DWR+KG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS
Sbjct: 106 FREPLSAE---LPKSVDWRKKGYVTPVKNQGLCGSCWAFSATGALEGQMFRKTGKLVSLS 162

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDI 206
            Q +VDCS   GN GC+GG +     YV+  GGL  E+ YPY  +   CK+K P      
Sbjct: 163 EQNLVDCSWAQGNEGCSGGLMDYAFQYVKDNGGLDSEKSYPYLAEDGFCKYK-PEYSAAN 221

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
            +  +   Q E  L   +ATVGPI+  I+AS  +FQ Y  GIY D  C+S Y++H +L+V
Sbjct: 222 DTGFLDIQQQEKFLMEAVATVGPISAGIDASLESFQFYKEGIYYDPDCSSKYLDHGVLVV 281

Query: 267 GY------TRNS-WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
           GY      +RN  W++KN W   WG NGY+ + K   N CGIA  A Y
Sbjct: 282 GYGFEGKDSRNKYWLVKNSWGEDWGMNGYIKMAKDRENHCGIATMASY 329


>gi|344258279|gb|EGW14383.1| Cathepsin L1 [Cricetulus griseus]
          Length = 295

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 169/295 (57%), Gaps = 11/295 (3%)

Query: 22  RKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL-THS 80
           + +  + +K+  W++N K I  HN++  +G HG+ L  N   DL    + + MT   +  
Sbjct: 5   KSQDEEGQKRAVWENNRKMIELHNEDYTKGKHGFHLEMNAFGDLTNTEFRQLMTGFQSMG 64

Query: 81  RIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTS 140
                + + P   +   +P  +DWR+ G++TP  +Q  CGAC+AFS   ++ GQ+F  T 
Sbjct: 65  TTEMNVFQEPRLGD---VPKSVDWRKHGYVTPVKDQGSCGACWAFSAVGSLVGQMFWKTG 121

Query: 141 EIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRP 200
           ++  LS Q +VDCS   GN+GC GG ++N   YV   GGL   E YPY+ + + C++   
Sbjct: 122 KLVPLSEQNLVDCSWSHGNIGCHGGLMQNAFQYVMDNGGLDTSESYPYESRNTTCRYNPE 181

Query: 201 NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVN 260
           N   +++ + V  P +E++L   +A VGPI+ +I+   H+FQ Y  G+Y +  C+S  ++
Sbjct: 182 NSAANVTGF-VKIPANEYSLMKAVAIVGPISAAIDTKHHSFQFYRGGMYYEPECSSSNLD 240

Query: 261 HAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           HA+L+VGY   S     W++KN W  +WG NGY+ + R  NN CGIA YA+Y  +
Sbjct: 241 HAVLVVGYGEESDGRKYWLVKNSWGTYWGMNGYIKMARDRNNNCGIATYAMYPTV 295


>gi|318037269|ref|NP_001187182.1| cathepsin L precursor [Ictalurus punctatus]
 gi|196475596|gb|ACG76367.1| cathepsin L [Ictalurus punctatus]
          Length = 336

 Score =  211 bits (537), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/305 (38%), Positives = 169/305 (55%), Gaps = 16/305 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + KDY +K  +  +++ W+ N KKI  HN E   G H Y L  NH  D+    + + M  
Sbjct: 36  HNKDYHEK-EEGWRRMVWEKNLKKIELHNLEHSLGKHSYRLAMNHFGDMPHEEFRQVMNG 94

Query: 77  LTHS--RIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
             H   +IR +L   P   E+   P  LDWREKG++TP  +Q  CG+C+AFS   A++GQ
Sbjct: 95  YKHKVRKIRGSLFMEPNFLEA---PSKLDWREKGYVTPVKDQGQCGSCWAFSTTGAMEGQ 151

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQS 193
            F+ T ++  LS Q +VDCS   GN GC GG +     Y++  GGL  E+ YPY G    
Sbjct: 152 QFRKTGKLVSLSEQNLVDCSRPEGNEGCNGGLMDQAFQYIKDNGGLDTEKFYPYLGTDDQ 211

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C +       + + +  +P   EHAL   +  VGP++V+I+A   +FQ Y SGIY +  
Sbjct: 212 PCHYDPSYSAANDTGFVDIPSGKEHALMKAVTAVGPVSVAIDAGHESFQFYQSGIYYEAD 271

Query: 254 CTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYA 304
           C+S+ ++H +L+VGY         +  WI+KN WS  WG+ GY+Y+ K  +N CGIA  A
Sbjct: 272 CSSEDLDHGVLVVGYGYEGENVDGKKYWIVKNSWSEQWGNKGYIYMAKDRHNHCGIATAA 331

Query: 305 VYALI 309
            Y L+
Sbjct: 332 SYPLV 336


>gi|226443040|ref|NP_001140018.1| Cathepsin L1 precursor [Salmo salar]
 gi|221221188|gb|ACM09255.1| Cathepsin L1 precursor [Salmo salar]
          Length = 338

 Score =  211 bits (537), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 110/293 (37%), Positives = 163/293 (55%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT---RLTHSRIRRTL 86
           +++ W+ N KKI  HN E   G H Y L  NH  D+    + + M    + T  + + +L
Sbjct: 49  RRMVWEKNLKKIEMHNLEHTMGKHSYRLGMNHFGDMTNEEFRQTMNGYKQTTERKFKGSL 108

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P     +  P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ F+ T ++  LS
Sbjct: 109 FMEPNY---LQAPKAVDWREKGYVTPVKDQGSCGSCWAFSTTGAMEGQQFRKTGKLVSLS 165

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y+Q   GL  EE YPY G  +  C +K      +
Sbjct: 166 EQNLVDCSRPEGNEGCNGGLMDQAFQYIQDNAGLDTEESYPYVGTDEDPCHYKPEFSGAN 225

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   EHA+   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L+
Sbjct: 226 ETGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYESGIYYEKECSSEELDHGVLV 285

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  + Y L+
Sbjct: 286 VGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATASSYPLV 338


>gi|405971603|gb|EKC36430.1| Cathepsin L [Crassostrea gigas]
          Length = 360

 Score =  211 bits (537), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 109/299 (36%), Positives = 169/299 (56%), Gaps = 7/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y     +S++   ++ N +KI  HN+    G   Y L  N  SDL    ++K    
Sbjct: 63  HDKTYDALEEESRRFEIFRENVQKIEEHNKLYHLGKKSYYLGVNQFSDLKHEEFVK-YNG 121

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L  + ++     S  +  +++ PD +DWR+KG++T   NQ  CG+C++FS   +++GQ F
Sbjct: 122 LKKTSLKDGGCSSYLAANNLVEPDSVDWRKKGYVTDVKNQGQCGSCWSFSTTGSLEGQHF 181

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           + + ++  LS  Q+VDCS   GN GC GG + N   Y++  GGL  EEDYPYK KQ  CK
Sbjct: 182 RKSGKLVSLSESQLVDCSQSFGNEGCNGGLMDNAFKYIKSVGGLESEEDYPYKPKQGTCK 241

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           F    +    +    +    E ALK  ++ VGP++V+I+AS  +FQ YA G+YD+  C+S
Sbjct: 242 FDDTKVAATDTGCVDVESGSESALKKAVSEVGPVSVAIDASHSSFQSYAGGVYDEPECSS 301

Query: 257 DYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           + ++H +L VGY  +      WI+KN W   WG++GY+ + R   N+CGIA  A Y L+
Sbjct: 302 EQLDHGVLCVGYGTDDQGQDYWIVKNSWGAEWGEDGYVKMSRNKKNQCGIATQASYPLV 360


>gi|431897851|gb|ELK06685.1| Cathepsin L1 [Pteropus alecto]
          Length = 331

 Score =  211 bits (537), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/290 (40%), Positives = 166/290 (57%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSR-IRRTLVR 88
           ++  W+ N K I  HNQE +QG H +T+  N   D+    + K M  L + +  +  L +
Sbjct: 46  RRAVWEKNMKMIELHNQEHRQGKHSFTMAINAFGDMTNEEFRKLMNGLQNQKHWKGKLFQ 105

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E   IP  +DWR+KG++TP  +Q  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 106 EPPFPE---IPPSVDWRQKGYVTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLISLSEQ 162

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG + N   YV+  GGL  EE YPY  +   CK+K P       S
Sbjct: 163 NLVDCSQSQGNEGCDGGLMDNAFQYVKDNGGLDSEESYPYLARDESCKYK-PEFSAANDS 221

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V   + E +L   +A+VGPI+V I+AS  +FQ Y  GIY +  C+S+ +NH +L+VGY
Sbjct: 222 GFVDIHKQERSLMKAVASVGPISVGIDASYSSFQFYEKGIYYEPECSSEDLNHGVLVVGY 281

Query: 269 -------TRNS-WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   +N  WI+KN W  +WG NGY+ + K  NN CGIA  A Y ++
Sbjct: 282 GFERAESNKNKYWIVKNSWGTNWGMNGYINMAKDQNNHCGIATAASYPIV 331


>gi|148709375|gb|EDL41321.1| mCG12216, isoform CRA_a [Mus musculus]
          Length = 333

 Score =  211 bits (536), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/303 (36%), Positives = 169/303 (55%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ K Y  +  + K+ + W+ N KKI  HN E   G HG+T+  N   D+    + K M 
Sbjct: 35  KHGKPYSLEEEEQKRAV-WEENMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKVMI 93

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++   +S + + SV +P  ++W+++G++TP   Q  C +C+A S+  AI+GQ+
Sbjct: 94  EIPVPTVKKG--KSVQKHLSVNLPKFINWKKRGYVTPVRTQGRCNSCWAISVTGAIEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDCS   GN GC  G+    L YV   GGL  E  YPY+ K+  C
Sbjct: 152 FQKTGQLIPLSVQNLVDCSRPQGNRGCYVGNTYRALKYVVENGGLESEATYPYEEKEGSC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N    I+ +  + P++E AL   +AT+GPI+V+I+A   +F  Y  GIY +  C+
Sbjct: 212 RYNPENSTASITGFDFV-PENEDALMNAVATIGPISVAIDARHESFLFYKRGIYHEPNCS 270

Query: 256 SDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           S  V HAMLLVGY         R  WI+KN     WG  GYM + R   N CGIA YA+Y
Sbjct: 271 SSVVTHAMLLVGYGFVGNESEGRKYWIVKNSMGTKWGSKGYMKIARDQGNHCGIATYALY 330

Query: 307 ALI 309
             +
Sbjct: 331 PRV 333


>gi|33242874|gb|AAQ01141.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  211 bits (536), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 179/318 (56%), Gaps = 15/318 (4%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           NKEW +  +    ++ K Y  +A +  ++  ++ N  KI  HN  A  G+H YTL  N  
Sbjct: 21  NKEWEMWKL----QHGKQYETEAEEYSRRFIFEKNTVKIAEHNIRASLGMHSYTLAMNKF 76

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCG 120
            D+H   + + +       +++ L+ S   +++++  +P  +DWR    ++   +Q +CG
Sbjct: 77  GDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVDWRNSHMVSEVKDQGECG 136

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+AFS   +++GQ    T ++ +LS QQ+VDCS   GN GC GG +     Y++  GGL
Sbjct: 137 SCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANGGL 196

Query: 181 MKEEDYPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
             EE YPY       CKF   ++   +  +  +   +EHALK  +ATVGP++V+I+A   
Sbjct: 197 DTEESYPYTATDDKPCKFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHE 256

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY---TRNS----WILKNWWSHHWGDNGYMYLK 292
           +FQ Y+SG+YD+  C+++ ++H +L VGY     NS    WI+KN W   WGD GY+ + 
Sbjct: 257 SFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMS 316

Query: 293 RG-NNRCGIANYAVYALI 309
           R  NN+CGIA  A Y L+
Sbjct: 317 RNKNNQCGIATSASYPLV 334


>gi|33242872|gb|AAQ01140.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 179/318 (56%), Gaps = 15/318 (4%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           NKEW +  +    ++ K Y  +A +  ++  ++ N  KI  HN  A  G+H YTL  N  
Sbjct: 21  NKEWEMWKL----QHGKQYETEAEEYSRRFIFEKNTVKIAEHNIRASLGMHSYTLAMNKF 76

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCG 120
            D+H   + + +       +++ L+ S   +++++  +P  +DWR    ++   +Q +CG
Sbjct: 77  GDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVDWRNSHMVSEVKDQGECG 136

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+AFS   +++GQ    T ++ +LS QQ+VDCS   GN GC GG +     Y++  GGL
Sbjct: 137 SCWAFSTTGSLEGQHSSKTGKLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANGGL 196

Query: 181 MKEEDYPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
             EE YPY       CKF   ++   +  +  +   +EHALK  +ATVGP++V+I+A   
Sbjct: 197 DTEESYPYTATDDKPCKFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHE 256

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY---TRNS----WILKNWWSHHWGDNGYMYLK 292
           +FQ Y+SG+YD+  C+++ ++H +L VGY     NS    WI+KN W   WGD GY+ + 
Sbjct: 257 SFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMS 316

Query: 293 RG-NNRCGIANYAVYALI 309
           R  NN+CGIA  A Y L+
Sbjct: 317 RNKNNQCGIATSASYPLV 334


>gi|7770062|ref|NP_036137.1| cathepsin J precursor [Mus musculus]
 gi|6467374|gb|AAF13142.1|AF136272_1 cathepsin J precursor [Mus musculus]
 gi|15418834|gb|AAK58455.1| cathepsin J [Mus musculus]
 gi|148709364|gb|EDL41310.1| cathepsin J, isoform CRA_b [Mus musculus]
          Length = 333

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 112/306 (36%), Positives = 172/306 (56%), Gaps = 16/306 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + KY K Y  +  ++ ++  W+ N + I  HN+E   G + +T++ N   D     + K 
Sbjct: 33  KTKYAKSYSPE--EALRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKS 90

Query: 74  MTRLTHSRIRRTLVRSPESNE-SVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           +  +    I   +      N  S+ +PD+ DWRE+G++TP  NQ  CG+C+AF+ A AI+
Sbjct: 91  IDNIP---IPAAMTDPHAQNHVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIE 147

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+F  T  +  LS+Q ++DCS   GN GC  G+      YV    GL  E  YPY+GK 
Sbjct: 148 GQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKD 207

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C+++  N   +I+ +  LPP +E  L V +A++GP++ +I+AS  +F+ Y  GIY + 
Sbjct: 208 GPCRYRSENASANITDYVNLPP-NELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEP 266

Query: 253 ACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
            C+S +VNHA+L+VGY          N W++KN W   WG NGYM + +  NN CGIA+ 
Sbjct: 267 NCSSYFVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQIAKDHNNHCGIASL 326

Query: 304 AVYALI 309
           A Y  I
Sbjct: 327 ASYPNI 332


>gi|224809458|ref|NP_001019580.2| cathepsin S, b.1 precursor [Danio rerio]
 gi|63101450|gb|AAH95788.1| Cathepsin S, b.1 [Danio rerio]
 gi|77748418|gb|AAI07613.1| Cathepsin S, b.1 [Danio rerio]
          Length = 330

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 117/303 (38%), Positives = 177/303 (58%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y  +  +  ++  W+ N + I  HN EA  G+H Y L  NH+ DL     ++ 
Sbjct: 31  KKTYGKIYTTEVEEFGRRQLWERNLQLITVHNLEASMGMHSYDLSMNHMGDLTTEEILQT 90

Query: 74  MTRLTH--SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +  LTH  S  +R +     S+    +PD LDWREKG+++    Q  CG+C+AFS   A+
Sbjct: 91  LA-LTHVPSGFKRQIANIVGSSGDA-VPDSLDWREKGYVSSVKMQGACGSCWAFSSVGAL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+ K+T ++ +LS Q +VDCS   GN GC GG + +   YV   GG+  +  YPY+G 
Sbjct: 149 EGQLKKTTGKLVDLSPQNLVDCSSKYGNKGCNGGFMSDAFQYVIDNGGIASDSAYPYRGV 208

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           Q  C +       + + +  +   DE+ALK  +A+VGPI+V+I+A+   F LY SG+Y+D
Sbjct: 209 QQQCSYSSSQRAANCTKYYFVRQGDENALKQAVASVGPISVAIDATRPQFVLYHSGVYND 268

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             C S  VNHA+L+VGY     ++ W++KN W   +GD GY+ + R  NN CGIA+YA Y
Sbjct: 269 PTC-SKRVNHAVLVVGYGTLSGQDYWLVKNSWGTRFGDGGYIRMARNKNNMCGIASYACY 327

Query: 307 ALI 309
            ++
Sbjct: 328 PVM 330


>gi|148669360|gb|EDL01307.1| mCG12220, isoform CRA_b [Mus musculus]
          Length = 335

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 171/303 (56%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + K M 
Sbjct: 37  KYGKAYSLEE-EGQKRAVWEDNMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKVMI 95

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++   +S +   SV +P  ++W+++G++TP   Q  C +C+AFS+  AI+GQ+
Sbjct: 96  EIPVPTVKKG--KSVQKRLSVNLPKFINWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQM 153

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDCS   GN GC  G+    L+YV   GGL  E  YPY+ K   C
Sbjct: 154 FRKTGQLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKDGSC 213

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N   +I+ +  + P++E AL   +A++GPI+V+I+A   +F  Y  GIY +  C+
Sbjct: 214 RYSPENSTANITGFEFV-PKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCS 272

Query: 256 SDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           S  V H+MLLVGY         R  W++KN     WG+ GYM + R   N CGIA YA+Y
Sbjct: 273 SSVVTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKGNHCGIATYALY 332

Query: 307 ALI 309
             +
Sbjct: 333 PRV 335


>gi|33242878|gb|AAQ01143.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 179/318 (56%), Gaps = 15/318 (4%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           NKEW +  +    ++ K Y  +A +  ++  ++ N  KI  HN  A  G+H YTL  N  
Sbjct: 21  NKEWEMWKL----QHGKQYETEAEEYSRRFIFEKNTVKIAEHNIRASLGMHSYTLAMNKF 76

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCG 120
            D+H   + + +       +++ L+ S   +++++  +P  +DWR    ++   +Q +CG
Sbjct: 77  GDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDNDDNGTLPKSVDWRNSHMVSEVKDQGECG 136

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+AFS   +++GQ    T ++ +LS QQ+VDCS   GN GC GG +     Y++  GGL
Sbjct: 137 SCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANGGL 196

Query: 181 MKEEDYPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
             EE YPY       CKF   ++   +  +  +   +EHALK  +ATVGP++V+I+A   
Sbjct: 197 DTEESYPYTATDDKPCKFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHE 256

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY---TRNS----WILKNWWSHHWGDNGYMYLK 292
           +FQ Y+SG+YD+  C+++ ++H +L VGY     NS    WI+KN W   WGD GY+ + 
Sbjct: 257 SFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMS 316

Query: 293 RG-NNRCGIANYAVYALI 309
           R  NN+CGIA  A Y L+
Sbjct: 317 RNKNNQCGIATSASYPLV 334


>gi|31981229|ref|NP_071721.2| cathepsin M precursor [Mus musculus]
 gi|12837968|dbj|BAB24022.1| unnamed protein product [Mus musculus]
 gi|12838184|dbj|BAB24116.1| unnamed protein product [Mus musculus]
 gi|16445013|gb|AAK00506.1| cathepsin M precursor [Mus musculus]
 gi|148669359|gb|EDL01306.1| mCG12220, isoform CRA_a [Mus musculus]
 gi|148921940|gb|AAI46421.1| Cathepsin M [synthetic construct]
 gi|151555373|gb|AAI48858.1| Cathepsin M [synthetic construct]
          Length = 333

 Score =  210 bits (535), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 171/303 (56%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + K M 
Sbjct: 35  KYGKAYSLEE-EGQKRAVWEDNMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKVMI 93

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++   +S +   SV +P  ++W+++G++TP   Q  C +C+AFS+  AI+GQ+
Sbjct: 94  EIPVPTVKKG--KSVQKRLSVNLPKFINWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDCS   GN GC  G+    L+YV   GGL  E  YPY+ K   C
Sbjct: 152 FRKTGQLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKDGSC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N   +I+ +  + P++E AL   +A++GPI+V+I+A   +F  Y  GIY +  C+
Sbjct: 212 RYSPENSTANITGFEFV-PKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCS 270

Query: 256 SDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           S  V H+MLLVGY         R  W++KN     WG+ GYM + R   N CGIA YA+Y
Sbjct: 271 SSVVTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKGNHCGIATYALY 330

Query: 307 ALI 309
             +
Sbjct: 331 PRV 333


>gi|47522698|ref|NP_999057.1| cathepsin L1 precursor [Sus scrofa]
 gi|2499874|sp|Q28944.1|CATL1_PIG RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|1468964|dbj|BAA07140.1| porcine cathepsin L [Sus scrofa]
 gi|15027272|emb|CAC44793.1| cathepsin L [Sus scrofa]
          Length = 334

 Score =  210 bits (535), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 113/291 (38%), Positives = 165/291 (56%), Gaps = 15/291 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W+ N K I  HNQE  QG HG+++  N   D+    + + M    + + ++  V  
Sbjct: 48  RRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVF- 106

Query: 90  PESNESVL--IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
              +ES++  +P  +DWREKG++T   NQ  CG+C+AFS   A++GQ+F+ T ++  LS 
Sbjct: 107 ---HESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSE 163

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDIS 207
           Q +VDCS   GN GC GG + N   YV+  GGL  EE YPY G+++     +P       
Sbjct: 164 QNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAAND 223

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
           +  V  PQ E AL   +ATVGPI+V+I+A   +FQ Y SGIY D  C+S  ++H +L+VG
Sbjct: 224 TGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVG 283

Query: 268 Y--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y        +   WI+KN W   WG NGY+ + K  NN CGI+  A Y  +
Sbjct: 284 YGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAASYPTV 334


>gi|348513249|ref|XP_003444155.1| PREDICTED: cathepsin K-like [Oreochromis niloticus]
          Length = 330

 Score =  210 bits (535), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 5/301 (1%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y  +     ++  W+ N   +  HNQEA  G H +TL  NHL+D+      ++
Sbjct: 30  KTKHGKVYDNQTEIDFRRAVWEKNVHLVLRHNQEASAGKHSFTLGLNHLADMTAEEINEK 89

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           +  L           + E      +P ++DWR++G + P  NQ  CG+C+AFS   A++G
Sbjct: 90  LNGLKLEETVNFTNGTFEDVSDSPLPVNVDWRKEGLVGPVRNQGLCGSCWAFSSLGALEG 149

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+ K T  +  LS Q +VDCS   GNLGC GG +    +YV   GG+  E  YPY+ K  
Sbjct: 150 QLKKRTGTLVSLSPQNLVDCSTQDGNLGCRGGYITKAYSYVIRNGGVDSESFYPYEHKNG 209

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C++         S +S+LP  DE  L+  LA+VGPI+V++NA   +F +Y+ G+Y+  +
Sbjct: 210 KCRYSVQGRAGYCSKFSILPEGDEKMLQKVLASVGPISVAVNAMLESFHMYSGGLYNVPS 269

Query: 254 CTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           C    +NHA+LLVGY  ++    W++KN W   WG+ GY+ L R  NN CGIA++ VY  
Sbjct: 270 CNPKLINHAVLLVGYGTDAGQDYWLVKNSWGTAWGEGGYIRLARNKNNLCGIASFPVYPT 329

Query: 309 I 309
           +
Sbjct: 330 V 330


>gi|47076309|emb|CAD89795.1| putative cathepsin L protease [Meloidogyne incognita]
          Length = 383

 Score =  210 bits (535), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/310 (37%), Positives = 176/310 (56%), Gaps = 15/310 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           ++K+ K Y  +  D+++ L + S  + I  H ++  +G   + + ENH++D+    Y K 
Sbjct: 75  KEKHGKSYPNQDEDNERMLAYLSAKQFIEKHQRDYTEGRVSFQVGENHMADVPFNQYRKL 134

Query: 73  -EMTRLTHSRIRRTLVRS---PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
               RL    + R    S   P  N    IP+ +DWR+KG +T   NQ  CG+C+AFS  
Sbjct: 135 NGFKRLLGDAVTRKNASSTFLPPLN-MYAIPESVDWRDKGLVTSVKNQGMCGSCWAFSAT 193

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
            A++GQ  +    +  LS Q ++DC+     GN+GC GG + N   Y++   G+  E  Y
Sbjct: 194 GALEGQHSRKLGTLVSLSEQNLIDCTKGEPYGNMGCNGGLMDNAFQYIEDNKGVDTENSY 253

Query: 187 PYKGKQSI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           PYK K    C FKR N+    + +  LP  DE  LK+ +AT GPI+V+I+A   +FQLYA
Sbjct: 254 PYKAKNGKKCLFKRSNVGATDTGYVDLPSGDEDKLKIAVATQGPISVAIDAGHRSFQLYA 313

Query: 246 SGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
            G+YD+EAC+ D + H +L+VGY  +      W++KN W  HWG+NGY+ + R  +N+CG
Sbjct: 314 HGVYDEEACSPDNLGHGVLVVGYGTDDIHGDYWLVKNSWGEHWGENGYIRMSRNKDNQCG 373

Query: 300 IANYAVYALI 309
           IA+ A Y L+
Sbjct: 374 IASKASYPLV 383


>gi|63101996|gb|AAH95694.1| Cathepsin S, b.1 [Danio rerio]
          Length = 330

 Score =  210 bits (535), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/303 (38%), Positives = 177/303 (58%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y  +  +  ++  W+ N + I  HN EA  G+H Y L  NH+ DL     ++ 
Sbjct: 31  KKTYGKIYTTEVEEFGRRQLWERNLQLITVHNLEASMGMHSYDLSMNHMGDLTTEEILQT 90

Query: 74  MTRLTH--SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +  LTH  S  +R +     S+    +PD LDWREKG+++    Q  CG+C+AFS   A+
Sbjct: 91  LA-LTHVPSGFKRQIANIVGSSGDA-VPDSLDWREKGYVSSVKMQGACGSCWAFSSVGAL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+ K+T ++ +LS Q +VDCS   GN GC GG + +   YV   GG+  +  YPY+G 
Sbjct: 149 EGQLKKTTGKLVDLSPQNLVDCSSKYGNKGCNGGFMSDAFQYVIDNGGIASDSAYPYRGV 208

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           Q  C +       + + +  +   DE+ALK  +A+VGPI+V+I+A+   F LY SG+Y+D
Sbjct: 209 QQQCSYSSSQRAANCTKYYFVRQGDENALKQAVASVGPISVAIDATRPQFVLYHSGVYND 268

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             C S  VNHA+L+VGY     ++ W++KN W   +GD GY+ + R  NN CGIA+YA Y
Sbjct: 269 PTC-SKRVNHAVLVVGYGTLSGQDHWLVKNSWGTRFGDGGYIRMARNKNNMCGIASYACY 327

Query: 307 ALI 309
            ++
Sbjct: 328 PVM 330


>gi|27960487|gb|AAO27847.1|AF456463_1 cathepsin M [Mus musculus]
 gi|16323039|gb|AAL15416.1| cathepsin M [Mus musculus]
          Length = 333

 Score =  210 bits (535), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 171/303 (56%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + K M 
Sbjct: 35  KYGKAYSLE-EEGQKRAVWEENMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKVMI 93

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++   +S +   SV +P  ++W+++G++TP   Q  C +C+AFS+  AI+GQ+
Sbjct: 94  EIPVPTVKKG--KSVQKRLSVNLPKFINWKKRGYVTPVRTQGRCNSCWAFSVTGAIEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T  +  LS+Q +VDCS   GN GC  G+    L+YV   GGL  E  YPY+ K+  C
Sbjct: 152 FRKTGPLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKEGSC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N   +I+ +  + P++E AL   +A++GPI+V+I+A   +F  Y  GIY +  C+
Sbjct: 212 RYSPENSTANITGFEFV-PKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCS 270

Query: 256 SDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           S  V H+MLLVGY         R  W++KN     WG+ GYM + R   N CGIA YA+Y
Sbjct: 271 SSVVTHSMLLVGYGFAGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKGNHCGIATYALY 330

Query: 307 ALI 309
             +
Sbjct: 331 PRV 333


>gi|33242882|gb|AAQ01145.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  210 bits (535), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 112/318 (35%), Positives = 177/318 (55%), Gaps = 15/318 (4%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           NKEW +  +    ++ K Y  +A +  ++  ++ N  KI  HN  A  G+H YTL  N  
Sbjct: 21  NKEWEMWKL----QHGKQYETEAEEYSRRFIFEKNTVKIAEHNIRASLGMHSYTLAMNKF 76

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCG 120
            D+H   + + +       +++ L+ S   +S+++  +P  +DWR    ++   +Q +CG
Sbjct: 77  GDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDSDDNGTLPKSVDWRNSHMVSEVKDQGECG 136

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
            C+AFS   +++GQ    T ++ +LS QQ+VDCS   GN GC GG +     Y+   GGL
Sbjct: 137 PCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIPANGGL 196

Query: 181 MKEEDYPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
             EE YPY       CKF   ++   +  +  +   +EHALK  +ATVGP++V+I+A   
Sbjct: 197 DTEESYPYTATDDKPCKFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHE 256

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY---TRNS----WILKNWWSHHWGDNGYMYLK 292
           +FQ Y+SG+YD+  C+++ ++H +L VGY     NS    WI+KN W   WGD GY+ + 
Sbjct: 257 SFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMS 316

Query: 293 RG-NNRCGIANYAVYALI 309
           R  NN+CGIA  A Y L+
Sbjct: 317 RNKNNQCGIATSASYPLV 334


>gi|33242870|gb|AAQ01139.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  210 bits (534), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 178/318 (55%), Gaps = 15/318 (4%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           NKEW +  +    ++ K Y  +A +  ++  ++ N  KI  HN  A  G+H YTL  N  
Sbjct: 21  NKEWEMWKL----QHGKQYETEAEEYSRRFIFEKNTVKIAEHNIRASLGMHSYTLAMNKF 76

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCG 120
            D+H   + + +       +++ L+ S   +++++  +P  +DWR    ++   +Q +CG
Sbjct: 77  GDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVDWRNSHMVSEVKDQGECG 136

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+AFS   +++GQ    T ++ +LS QQ+VDCS   GN GC GG +     Y+   GGL
Sbjct: 137 SCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYITANGGL 196

Query: 181 MKEEDYPYKG-KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
             EE YPY       CKF   ++   +  +  +   +EHALK  +ATVGP++V+I+A   
Sbjct: 197 DTEESYPYTATDDEPCKFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHE 256

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY---TRNS----WILKNWWSHHWGDNGYMYLK 292
           +FQ Y+SG+YD+  C+++ ++H +L VGY     NS    WI+KN W   WGD GY+ + 
Sbjct: 257 SFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMS 316

Query: 293 RG-NNRCGIANYAVYALI 309
           R  NN+CGIA  A Y L+
Sbjct: 317 RNKNNQCGIATSASYPLV 334


>gi|225719768|gb|ACO15730.1| Cathepsin L1 precursor [Caligus clemensi]
          Length = 338

 Score =  210 bits (534), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 109/293 (37%), Positives = 163/293 (55%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT---RLTHSRIRRTL 86
           +++ W+ N KKI  HN E   G H + L  NH  D+    + + M    + T  + + +L
Sbjct: 49  RRMVWEKNLKKIEIHNLEHTMGKHSHRLGMNHFGDMTNEEFRQTMNGYKQTTERKFKGSL 108

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P     +  P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ F+ T ++  LS
Sbjct: 109 FMEPNY---LQAPKAVDWREKGYVTPVKDQGSCGSCWAFSTTGAMEGQPFRKTGKLVSLS 165

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y+Q   GL  EE YPY G  +  C +K      +
Sbjct: 166 EQNLVDCSRPEGNEGCNGGLMDQAFQYIQDNAGLDTEESYPYVGTDEDPCHYKPEFSAAN 225

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   EHA+   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L+
Sbjct: 226 ETGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYESGIYYEKECSSEELDHGVLV 285

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  + Y L+
Sbjct: 286 VGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATASSYPLV 338


>gi|463046|gb|AAA49207.1| cysteine proteinase [Cyprinus carpio]
          Length = 331

 Score =  210 bits (534), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 108/293 (36%), Positives = 165/293 (56%), Gaps = 6/293 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K Y  K  +  ++  W+ N   I  HN E   GLH Y L  NH+ D+     ++ 
Sbjct: 31  KKTHNKFYSSKDEELGRRELWERNLGLITLHNLEDLHGLHSYDLGMNHMGDMTTEEILQT 90

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           +  +      +        +    IPD LDWREKG+++   NQ  CG+C+AFS   A++G
Sbjct: 91  LATIRVPPGFKRQTAEFVGSSGAAIPDSLDWREKGYVSSVKNQGACGSCWAFSSVGALEG 150

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+ K+T ++ +LS Q +VDCS   GN GC GG +     YV   GG+  E  YPY+G Q 
Sbjct: 151 QLMKTTGKLVDLSPQNLVDCSSSYGNYGCGGGLMSAAFQYVIDNGGIDSESSYPYEGVQG 210

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C++    +  + + +  +   DE ALK  +A +GPI+V+I+A+   F LY SG+Y+D +
Sbjct: 211 QCRYNPSQLAANCTKYYYVRQGDEEALKQAVANIGPISVAIDATHPQFILYRSGVYNDPS 270

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           CT++ +NHA+L VGY     ++ W++KN W   +GD GY+ + R  NN CGIA
Sbjct: 271 CTTN-INHAVLAVGYGAIAGQDFWLVKNSWGTGFGDGGYIRMARNQNNMCGIA 322


>gi|348531521|ref|XP_003453257.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 333

 Score =  209 bits (533), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 111/306 (36%), Positives = 174/306 (56%), Gaps = 16/306 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K++K Y   + ++ +K  W +N K +  HN  A QGL  Y L     +D+    Y + ++
Sbjct: 32  KFEKSYDSDSEEAHRKQIWLNNRKLVLVHNILADQGLKSYRLGMTQFADMENEEYKRLVS 91

Query: 76  RLTHSRIR-------RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           R               T +R PE  +   +PD +DWR+KG++T   NQ  CG+C+AFS  
Sbjct: 92  RGCLGSFNTSLHHRGSTFLRLPEGTD---LPDTVDWRDKGYVTDVQNQMQCGSCWAFSAI 148

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++GQ F+ T ++  LS QQ+VDCS   GN GC GG +     Y+Q  GG+  E  YPY
Sbjct: 149 GALEGQNFRKTGKLVSLSKQQLVDCSQSFGNHGCNGGWMDWAFKYIQATGGIDTEASYPY 208

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           + ++  C +    +    + +  + P +E ALK  +AT+GPI+++++AS  +FQ Y SG+
Sbjct: 209 EAEEGNCHYNPETVGATCTGYVDVSP-NEDALKEAVATIGPISIAMDASHESFQFYQSGV 267

Query: 249 YDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           YD+ +C +   +HAML VGY T N    W++KN +   WG+ GY+ + R  +N+CGIA+ 
Sbjct: 268 YDEPSCITSRFSHAMLAVGYGTENGHDYWLVKNSFGLGWGEKGYIKMSRNKSNQCGIASK 327

Query: 304 AVYALI 309
           A Y L+
Sbjct: 328 ASYPLV 333


>gi|33242876|gb|AAQ01142.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  209 bits (533), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 178/318 (55%), Gaps = 15/318 (4%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           NKEW +  +    ++ K Y  +A +  ++   + N  KI  HN  A  G+H YTL  N  
Sbjct: 21  NKEWEMWKL----QHGKQYETEAEEYSRRFILEKNTVKIAEHNIRASLGMHSYTLAMNKF 76

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCG 120
            D+H   + + +       +++ L+ S   +++++  +P  +DWR    ++   +Q +CG
Sbjct: 77  GDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVDWRNSHMVSEVKDQGECG 136

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+AFS   +++GQ    T ++ +LS QQ+VDCS   GN GC GG +     Y++  GGL
Sbjct: 137 SCWAFSTTGSLEGQHSNKTGKLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANGGL 196

Query: 181 MKEEDYPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
             EE YPY       CKF   ++   +  +  +   +EHALK  +ATVGP++V+I+A   
Sbjct: 197 DTEESYPYTATDDKPCKFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHE 256

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY---TRNS----WILKNWWSHHWGDNGYMYLK 292
           +FQ Y+SG+YD+  C+++ ++H +L VGY     NS    WI+KN W   WGD GY+ + 
Sbjct: 257 SFQFYSSGVYDEPQCSTEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMS 316

Query: 293 RG-NNRCGIANYAVYALI 309
           R  NN+CGIA  A Y L+
Sbjct: 317 RNKNNQCGIATSASYPLV 334


>gi|21483184|gb|AAF86584.1| cathepsin L cysteine protease [Haemonchus contortus]
          Length = 355

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 111/282 (39%), Positives = 163/282 (57%), Gaps = 17/282 (6%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNES----- 95
           I  HN+E + G   + +  N ++DL    Y K    L   R+RR    S +SN +     
Sbjct: 78  IEEHNKEHRLGRKTFEMGLNEIADLPFSQYRK----LNGYRMRRQFGDSMQSNGTKFLVP 133

Query: 96  --VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
             V IP+ +DWRE+G +TP  NQ  CG+C+AFS   A++GQ  ++T ++  LS Q +VDC
Sbjct: 134 FNVQIPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEGQHARATGKLVSLSEQNLVDC 193

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GN GC GG +     Y++   G+  E+ YPY G+++ C FKR  +  D   +  LP
Sbjct: 194 STKYGNHGCNGGLMDLAFEYIKENHGVDTEDSYPYVGRETKCHFKRNTVGADDKGFVDLP 253

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
             DE ALK  +AT GPI+++I+A   +FQLY  G+Y DE C+S+ ++H +LLVGY  +  
Sbjct: 254 EGDEEALKKAVATQGPISIAIDAGHRSFQLYKKGVYFDEECSSEELDHGVLLVGYGTDPE 313

Query: 273 ----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               W++KN W   WG+ GY+ + R  NN CG+A  A Y L+
Sbjct: 314 AGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGVATKASYPLV 355


>gi|340370276|ref|XP_003383672.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/304 (36%), Positives = 170/304 (55%), Gaps = 24/304 (7%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  K T+ ++++ W+SN K +  HN  + +   G+T+  N  +DL    +     
Sbjct: 30  KYNKVYETKETELERQIIWESNKKFVENHNANSDK--FGFTVAMNEFADLDAGEF----- 82

Query: 76  RLTHSRIRRTLVRSPESNES--------VLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
                RI   L+  P S  S        V +PD +DW+EKG +TP  NQ  CG+C++FS 
Sbjct: 83  ----GRIFNGLLPRPSSYNSTNIYKPSGVKVPDTVDWKEKGAVTPIKNQGQCGSCWSFSS 138

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             +++GQ F +T  +  LS QQ++DCS   GN GC GG + N+  Y++   G   E++YP
Sbjct: 139 TGSLEGQHFINTGTLVSLSEQQLMDCSTKYGNHGCNGGLMDNSFRYLKSVAGDETEDNYP 198

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y  +  +C++     VV   S+  +P  DE +LK  +A VGPI+V+I+AS  +FQLY SG
Sbjct: 199 YTAENGVCRYDSSLAVVTDKSYVDIPQGDEDSLKDAVANVGPISVAIDASHSSFQLYNSG 258

Query: 248 IYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           +Y    C+S  ++H +L +GY     ++ W++KN W   WG  GY+ + R  NN CGIA 
Sbjct: 259 VYYASTCSSTQLDHGVLAIGYGTEDGKDYWLVKNSWGTSWGMEGYIKMSRNRNNNCGIAT 318

Query: 303 YAVY 306
            A Y
Sbjct: 319 QASY 322


>gi|357216861|gb|AET71138.1| cysteine peptidase isoform b [Sphenophorus levis]
          Length = 324

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 166/298 (55%), Gaps = 9/298 (3%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ K Y+ +A ++K+   ++ N +KI  HN E +QG+H YT   N  +D+    +   + 
Sbjct: 32  KHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRAEFKAMLA 91

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
               ++      ++ +  + V +P+ +DWR +  +TP  +Q  CG+C+AF++  + +G  
Sbjct: 92  TQVKTKPSIVATKTFQLADGVSVPESIDWRSRNVVTPIKDQAQCGSCWAFAVVGSTEGAY 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
             ST ++   S QQ+VDC+    N GC GG L +T  Y+Q   GL  E DYPY G    C
Sbjct: 152 ALSTGKLTRFSEQQLVDCT-TDLNYGCDGGYLDDTFPYIQ-TNGLELESDYPYTGYDGYC 209

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
            ++   +V  +SS+ V  P +E AL   + T GP+A++INA     Q Y SGI DD+ C 
Sbjct: 210 SYESSKVVTKVSSY-VSVPANEQALLEAVGTAGPVAIAINADD--LQFYFSGIIDDKYCD 266

Query: 256 SDYVNHAMLLVGYT----RNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
            +Y++H +L VGY     R+ W++KN W   WG++GY    RG N CG+   AVY LI
Sbjct: 267 PEYLDHGVLAVGYDSENGRDYWLIKNSWGADWGESGYFRFLRGQNICGVKEDAVYPLI 324


>gi|327289219|ref|XP_003229322.1| PREDICTED: cathepsin K-like, partial [Anolis carolinensis]
          Length = 289

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/285 (39%), Positives = 159/285 (55%), Gaps = 20/285 (7%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W+ N K I+THN E   G H + L  NHL D+     +++MT L     +  L R P SN
Sbjct: 10  WEKNLKYINTHNLEFSLGRHTFELAMNHLGDMTSEELVQKMTGL-----KVPLSRKP-SN 63

Query: 94  ESVLIPD-------HLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
           +++ IPD        +D+R+KG++TP  NQ  CG+C+AFS   A++ Q+   T ++  LS
Sbjct: 64  DTLYIPDWEERVPDAVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEAQLKMKTGKLLNLS 123

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDI 206
            Q +VDC  +S N GC GG + N   YV    G+  ++ YPY G+   C +         
Sbjct: 124 PQNLVDC--VSNNDGCGGGYMTNAFEYVHVNRGIDSDDTYPYIGQDENCMYNPTGKAAKC 181

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
             +  +P  DE ALK  +A  GP++V I+AS  +FQ Y+ G+Y DE C +D +NHA+L V
Sbjct: 182 RGYKEIPEGDEKALKRAVARKGPVSVGIDASLASFQFYSRGVYYDENCNADNINHAVLAV 241

Query: 267 GYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           GY        WI+KN W   WGD GY+ + R  NN CGIAN A +
Sbjct: 242 GYGSQKGTKHWIVKNSWGEDWGDKGYILMARNMNNACGIANLASF 286


>gi|410978262|ref|XP_003995514.1| PREDICTED: cathepsin L1-like [Felis catus]
          Length = 333

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/286 (38%), Positives = 164/286 (57%), Gaps = 14/286 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVRSPES 92
           W+ N K I  HN E  QG H +T+  N   D+    + + M  L   + ++  + ++P  
Sbjct: 52  WKKNMKMIRQHNWEHSQGKHSFTVAMNGFGDMTNEEFKQVMNGLQMQKHKKGKMFQAPLF 111

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
            +   IP  +DWREKG++TP  +Q  CG+C+AFS   A++GQ+F+ T ++  LS Q +VD
Sbjct: 112 AK---IPSSVDWREKGYVTPVKDQGPCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVD 168

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG + N   YV+  GGL  EE YPY  +   CK+K  +   + + +  +
Sbjct: 169 CSQAEGNEGCNGGLMNNAFQYVKDNGGLDSEESYPYHAQDESCKYKPQDSAANDTGFFDI 228

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY---- 268
            PQ E AL V +AT GPI+V I+AS  TFQ Y  GIY D  C+S+ ++H +L++GY    
Sbjct: 229 -PQQEKALMVAVATKGPISVGIDASHFTFQFYHEGIYYDPDCSSEDLDHGVLVIGYGTEI 287

Query: 269 ----TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                +  WI+KN W  +WG +GY+ + K   N CGIA  A + ++
Sbjct: 288 GQSINKTYWIVKNSWGANWGIDGYIKMAKDRKNHCGIATMASFPVV 333


>gi|390347681|ref|XP_801784.2| PREDICTED: cathepsin L1-like isoform 2 [Strongylocentrotus
           purpuratus]
          Length = 336

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 168/298 (56%), Gaps = 5/298 (1%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y     + +++L W+ N K I+ HN +      G+ L  N   D+        M  
Sbjct: 39  HTKSYTNDMHELERRLVWEENVKMINMHNLDHSLHKKGFRLGMNEYGDMRLHEVRSTMNG 98

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
              S + +    +  +  ++ +PD +DWR KG++TP  NQ  CG+C+AFS   +++GQ F
Sbjct: 99  YKSSNVTKVQGSTFLTPSNIQVPDTVDWRTKGYVTPVKNQGQCGSCWAFSTTGSLEGQTF 158

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K TS++  LS Q +VDCS   GN+GC GG +     YV    G+  E+ YPY  +   C 
Sbjct: 159 KKTSKLVSLSEQNLVDCSRTEGNMGCEGGLMDQGFQYVIDNHGIDSEDCYPYDAEDETCH 218

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +K      +++ ++ +   DE AL   +A+VGP++V+I+AS  +FQLY SG+YD+  C+S
Sbjct: 219 YKASCDSAEVTGFTDVTSGDEQALMEAVASVGPVSVAIDASHQSFQLYESGVYDEPECSS 278

Query: 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
             ++H +L+VGY     ++ W++KN W   WG +GY+ + R  +N+CGIA  A Y L+
Sbjct: 279 SELDHGVLVVGYGTDGGKDYWLVKNSWGETWGLSGYIKMSRNKSNQCGIATSASYPLV 336


>gi|281346354|gb|EFB21938.1| hypothetical protein PANDA_009085 [Ailuropoda melanoleuca]
          Length = 333

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/294 (38%), Positives = 164/294 (55%), Gaps = 22/294 (7%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W+ N K I  HN+E  QG H + L  N   DL    + + M  L     R      
Sbjct: 48  RRAVWEKNMKMIDQHNEEYSQGKHSFILAMNAFGDLTNEEFKQVMNGLKIQNPR------ 101

Query: 90  PESNESVLIP-----DHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEE 144
            E N   L+P       +DWREKG++TP  +Q  CG+C+AFS   A++GQ+F+ T ++  
Sbjct: 102 -EGNMFQLLPFAETPSSVDWREKGYVTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLVS 160

Query: 145 LSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVV 204
           LS Q +VDCS   GN GC GG + N   YV+  GGL  EE YPY  +   CK+K      
Sbjct: 161 LSEQNLVDCSRAEGNAGCNGGLMDNAFRYVKDNGGLDSEESYPYLAQDGRCKYKPEQSAA 220

Query: 205 DISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAML 264
           + + ++ +  QDE +L +++ATVGPI+V+I+AS  TF+ Y  GIY D  C+S+ ++H +L
Sbjct: 221 NDTGFADI-HQDEESLMLSVATVGPISVAIDASLDTFRFYYKGIYYDPNCSSEDLDHGVL 279

Query: 265 LVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           +VGY         +N WI+KN W   WG  GY+ + K   N CGIA  A + ++
Sbjct: 280 VVGYGSDEREAENKNYWIVKNSWGTQWGMQGYILMAKDRGNHCGIATSASFPIV 333


>gi|405958752|gb|EKC24846.1| Cathepsin L1 [Crassostrea gigas]
          Length = 290

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 107/284 (37%), Positives = 167/284 (58%), Gaps = 11/284 (3%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W++N   I+ HN E Q+G H YTL  N  +DL    ++         R R ++   P+++
Sbjct: 9   WEANLDYINQHNDEFQRGAHSYTLGLNEFADLSHEEFLHLYGGGI--RPRDSVSSDPDTD 66

Query: 94  ---ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQV 150
              ++  +P  +DWR++G++ P  NQ  CG+C+AF+   A++GQ+   T ++  LS+QQ+
Sbjct: 67  IVVDTSGLPLEVDWRKEGWVGPIGNQFACGSCWAFTATGALEGQVRNKTGKLIVLSVQQM 126

Query: 151 VDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWS 210
           +DCS   GN GC GG +     Y+   GG+     YPYK  +  CKF +  +V  +  + 
Sbjct: 127 MDCSEKWGNHGCEGGLMDAAFKYIHDVGGIESNASYPYKPAEEKCKFNKSAVVAKVKGYK 186

Query: 211 VLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-- 268
            L P+ E +L V +ATVGPI+ +++AS  +FQLY SG+YD+  C+S  V+H++++VGY  
Sbjct: 187 DL-PKSEESLMVAVATVGPISAALDASHSSFQLYKSGVYDEPNCSSGQVDHSLVVVGYGL 245

Query: 269 --TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              +  WI KN W   WGD GY+ L K  NN+CGIAN   Y ++
Sbjct: 246 MDGKKYWIAKNSWGTSWGDKGYILLSKDKNNQCGIANTLSYPIL 289


>gi|317135059|gb|ADV03094.1| cathepsin L [Hyriopsis cumingii]
 gi|372126672|gb|AEX88474.1| cathepsin L [Hyriopsis schlegelii]
          Length = 333

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/299 (36%), Positives = 164/299 (54%), Gaps = 8/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           Y K YR      +  + W+ N   I+ HN +A QG H Y L  N   DL    Y +  T 
Sbjct: 37  YNKTYRAHEEPVRYSV-WKDNFLAINRHNSKADQGFHTYWLAMNEYGDLTNEEYFRLRTG 95

Query: 77  L-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           L  ++ I R  +    +N S   P  +DWR KG++TP  NQ  CG+CYAFS   A++GQ 
Sbjct: 96  LKINANIERRGLVFKYTNLSEY-PSEVDWRSKGYVTPVKNQGGCGSCYAFSATGAVEGQH 154

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS Q +VDCS   GN GC GG +  +  Y++   G+  EE YPY+ +   C
Sbjct: 155 FRKTGKLVSLSEQNIVDCSFKEGNKGCRGGLMDKSFTYIKDNNGIDTEEAYPYEARDGPC 214

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           +F+R  +   +  +  LP  DE AL+  + T+GPI+V+I+     F+ Y  G++D+  C+
Sbjct: 215 RFRRSEVGATVRGYVDLPENDEIALQHAVTTIGPISVAIDGHHFNFRFYHHGVFDNPNCS 274

Query: 256 SDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
              +NH +L+VGY TR+    W++KN W   WG  GY+ + R N N+C I   A Y ++
Sbjct: 275 KTKINHGVLVVGYGTRDGLDYWLVKNSWGERWGAEGYILMSRNNDNQCCITCAASYPIV 333


>gi|332260024|ref|XP_003279085.1| PREDICTED: cathepsin L1 isoform 3 [Nomascus leucogenys]
 gi|441593306|ref|XP_004087072.1| PREDICTED: cathepsin L1 [Nomascus leucogenys]
 gi|441593309|ref|XP_004087073.1| PREDICTED: cathepsin L1 [Nomascus leucogenys]
          Length = 333

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 163/290 (56%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIEQHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY-NPKYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+++A   +FQ Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAVDAGHQSFQFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNNKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|390994425|gb|AFM37362.1| cathepsin L2 [Dictyocaulus viviparus]
          Length = 352

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/282 (39%), Positives = 160/282 (56%), Gaps = 17/282 (6%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNES----- 95
           I  HN E + G   + +  N+++DL       E  +L   R RR    S   N +     
Sbjct: 75  IEEHNHEHRLGRKTFEMGLNNIADLP----FSEYRKLNGYRHRRLFGDSMRKNGTKFLVP 130

Query: 96  --VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
             V +PD +DWRE   +TP  NQ  CG+C+AFS   A++GQ F++T ++  LS Q +VDC
Sbjct: 131 FNVKVPDSVDWREHNLVTPVKNQGMCGSCWAFSATGALEGQHFRATGKLVSLSEQNLVDC 190

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GN GC GG +     Y++   G+  EE YPY GK+  C FK+ +I  +   +  LP
Sbjct: 191 STKYGNHGCNGGLMDLAFEYIKDNHGIDTEEGYPYVGKEMRCHFKKRDIGAEDRGFVDLP 250

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
             DE ALKV +AT GPI+++I+A   +FQLY  G+Y DE C+S+ ++H +LLVGY  +  
Sbjct: 251 EGDEDALKVAVATQGPISIAIDAGHRSFQLYKKGVYFDEECSSEELDHGVLLVGYGTDPE 310

Query: 273 ----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               WI+KN W   WG+ GY+ + R  NN CG+A  A Y L+
Sbjct: 311 AGDYWIIKNSWGTKWGEKGYVRIARNRNNHCGVATKASYPLV 352


>gi|301769893|ref|XP_002920368.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
          Length = 503

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/294 (38%), Positives = 164/294 (55%), Gaps = 22/294 (7%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W+ N K I  HN+E  QG H + L  N   DL    + + M  L     R      
Sbjct: 48  RRAVWEKNMKMIDQHNEEYSQGKHSFILAMNAFGDLTNEEFKQVMNGLKIQNPR------ 101

Query: 90  PESNESVLIP-----DHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEE 144
            E N   L+P       +DWREKG++TP  +Q  CG+C+AFS   A++GQ+F+ T ++  
Sbjct: 102 -EGNMFQLLPFAETPSSVDWREKGYVTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLVS 160

Query: 145 LSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVV 204
           LS Q +VDCS   GN GC GG + N   YV+  GGL  EE YPY  +   CK+K      
Sbjct: 161 LSEQNLVDCSRAEGNAGCNGGLMDNAFRYVKDNGGLDSEESYPYLAQDGRCKYKPEQSAA 220

Query: 205 DISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAML 264
           + + ++ +  QDE +L +++ATVGPI+V+I+AS  TF+ Y  GIY D  C+S+ ++H +L
Sbjct: 221 NDTGFADI-HQDEESLMLSVATVGPISVAIDASLDTFRFYYKGIYYDPNCSSEDLDHGVL 279

Query: 265 LVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           +VGY         +N WI+KN W   WG  GY+ + K   N CGIA  A + ++
Sbjct: 280 VVGYGSDEREAENKNYWIVKNSWGTQWGMQGYILMAKDRGNHCGIATSASFPIV 333



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 9/111 (8%)

Query: 199 RPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDY 258
           RP       +  V  PQ E A+ + +A  GP++ +I AS  +FQ    GIY D  C+S+ 
Sbjct: 386 RPECSAADVTGPVNVPQQEEAVMLAVAAGGPVSAAIRASLGSFQFCKEGIYYDPNCSSED 445

Query: 259 VNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGI 300
           ++H +L+VGY         +N WI+KN W   WG  GYM L R  +N C I
Sbjct: 446 LDHGVLVVGYGSDEREAENKNYWIVKNSWGTDWGLQGYMLLVRDWDNHCEI 496


>gi|254674508|dbj|BAH86062.1| cysteine protease [Haemaphysalis longicornis]
          Length = 333

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 104/276 (37%), Positives = 160/276 (57%), Gaps = 7/276 (2%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT--RLTHSRIRRTLVRSPESNESVLI 98
           +  HN +  +GL  Y L  N   DL P  + K +   R   ++ +R     P +     +
Sbjct: 58  VAKHNAKYAKGLVSYKLAMNKFGDLLPHEFAKMVNGYRGKQNKEQRPTFIPPANLNDSSL 117

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWR+KG +TP  NQ  CG+C+AFS   +++GQ F+ T ++  LS Q +VDCS   G
Sbjct: 118 PTTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSDDFG 177

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   Y++  GG+  EE +PY  +   CKFK+ ++    + +  +    E 
Sbjct: 178 NQGCNGGLMDNGFQYIKANGGIDTEESHPYTAQDGDCKFKKADVGATDAGFVDIQQGSED 237

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWI 274
            LK  +ATVGP++V+I+AS  +FQLY+ G+YD+  C+S  ++H +L VGY     +  W+
Sbjct: 238 DLKKAVATVGPVSVAIDASHGSFQLYSQGVYDEPDCSSSQLDHGVLTVGYGVKNGKKYWL 297

Query: 275 LKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           +KN W   WGDNGY+ + R  +N+CGIA+ A Y L+
Sbjct: 298 VKNSWGGDWGDNGYILMSRDKDNQCGIASSASYPLV 333


>gi|22653680|sp|Q9JL96.1|CATM_MOUSE RecName: Full=Cathepsin M; Flags: Precursor
 gi|7715970|gb|AAF68224.1|AF202528_1 cathepsin M [Mus musculus]
          Length = 333

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 171/303 (56%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + K M 
Sbjct: 35  KYGKAYSLE-EEGQKRAVWEDNMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKVMI 93

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++   +S +   SV +P  ++W+++G++TP   Q  C +C+AFS+  AI+GQ+
Sbjct: 94  EIPVPTVKKG--KSVQKRLSVNLPKFINWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDCS   GN GC  G+    L+YV   GGL  E  YPY+ K   C
Sbjct: 152 FRKTGQLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKDGSC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N   +I+ +  + P++E AL   +A++GPI+V+I+A   +F  Y  GIY +  C+
Sbjct: 212 RYSPENSTANITGFEFV-PKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCS 270

Query: 256 SDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           S  V H+MLLVGY         R  W++KN     WG+ GYM + R   N CGIA YA+Y
Sbjct: 271 SCVVTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKGNHCGIATYALY 330

Query: 307 ALI 309
             +
Sbjct: 331 PRV 333


>gi|6630972|gb|AAF19630.1|AF194426_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 169/303 (55%), Gaps = 8/303 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY--I 71
           + KY K Y  +  +  +K  W+SN + +  HN  A QG   Y L  N  +DL+   +  +
Sbjct: 23  KGKYGKSYLGRGEEVLRKRVWESNLQIVQQHNVLADQGQANYRLGMNTYADLYNEEFMAL 82

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           K  + +  ++ + +  ++ +    V +P  +DWR +G++TP  +Q  CG+C++FS   ++
Sbjct: 83  KGSSGILQAKDQSS-TQTFKPLVGVTLPSSVDWRNQGYVTPVKDQGQCGSCWSFSATGSL 141

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F  T  +  LS QQ+VDCS   GN GC+GG + +  +Y++ AGG+  E  YPY  +
Sbjct: 142 EGQHFAKTGTLVSLSEQQLVDCSWSYGNYGCSGGLMESAYDYIRDAGGVQLESAYPYTAQ 201

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C F +   V   +    +P  DE +L   + TVGP+AV+I+AS + FQLY SG+YD 
Sbjct: 202 NGRCHFDQSKAVATCTGHVAIPSGDEQSLMQAVGTVGPVAVAIDASGYDFQLYESGVYDR 261

Query: 252 EACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             C+S  ++H +L  GY        W++KN W   WG  GY+ + R  +N+CGIA  A Y
Sbjct: 262 SRCSSSSLDHGVLAAGYGTEGGNDYWLVKNSWGPGWGAQGYIKMSRNKSNQCGIATMACY 321

Query: 307 ALI 309
            L+
Sbjct: 322 PLV 324


>gi|21483188|gb|AAK77918.1| cathepsin L 1 [Dictyocaulus viviparus]
          Length = 347

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/282 (39%), Positives = 160/282 (56%), Gaps = 17/282 (6%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNES----- 95
           I  HN E + G   + +  N+++DL       E  +L   R RR    S   N +     
Sbjct: 70  IEEHNHEHRLGRKTFEMGLNNIADLP----FSEYRKLNGYRHRRLFGDSMRKNGTKFLVP 125

Query: 96  --VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
             V +PD +DWRE   +TP  NQ  CG+C+AFS   A++GQ F++T ++  LS Q +VDC
Sbjct: 126 FNVKVPDSVDWREHNLVTPVKNQGMCGSCWAFSATGALEGQHFRATGKLVSLSEQNLVDC 185

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GN GC GG +     Y++   G+  EE YPY GK+  C FK+ +I  +   +  LP
Sbjct: 186 STKYGNHGCNGGLMDLAFEYIKDNHGIDTEEGYPYVGKEMRCHFKKRDIGAEDRGFVDLP 245

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
             DE ALKV +AT GPI+++I+A   +FQLY  G+Y DE C+S+ ++H +LLVGY  +  
Sbjct: 246 EGDEDALKVAVATQGPISIAIDAGHRSFQLYKKGVYFDEECSSEELDHGVLLVGYGTDPE 305

Query: 273 ----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               WI+KN W   WG+ GY+ + R  NN CG+A  A Y L+
Sbjct: 306 AGDYWIIKNSWGTKWGEKGYVRIARNRNNHCGVATKASYPLV 347


>gi|410923307|ref|XP_003975123.1| PREDICTED: cathepsin L1-like [Takifugu rubripes]
          Length = 336

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 111/293 (37%), Positives = 165/293 (56%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL---THSRIRRTL 86
           +++ W+ N KKI  HN E   G H Y+L  NH  D+    + + M      +  ++R +L
Sbjct: 47  RRMVWEKNLKKIELHNLEHSMGKHTYSLGMNHFGDMTHEEFRQIMNGYKLKSQRKLRGSL 106

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E+   P  +DWR+KG++TP  +Q  CG+C+AFS   A++GQ F+ T  +  LS
Sbjct: 107 FMEPNFLEA---PRSVDWRDKGYVTPVKDQGQCGSCWAFSTTGAMEGQHFRKTGTLVSLS 163

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y++  GGL  EE YPY G  +  C +       +
Sbjct: 164 EQNLVDCSRPEGNEGCNGGLMDQAFQYIKDNGGLDSEESYPYLGTDEGPCHYDPSYNSAN 223

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   E AL   +A+VGP++V+I+A   +FQ Y SGIY D+ C+S+ ++H +L+
Sbjct: 224 DTGFVDVPSGSERALMKAVASVGPVSVAIDAGHESFQFYHSGIYYDKECSSEELDHGVLV 283

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS +WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 284 VGYGFEGKDVDGKKYWIVKNSWSENWGDKGYIYMAKDKKNHCGIATAASYPLV 336


>gi|223646726|gb|ACN10121.1| Cathepsin L1 precursor [Salmo salar]
 gi|223672581|gb|ACN12472.1| Cathepsin L1 precursor [Salmo salar]
          Length = 338

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/293 (37%), Positives = 162/293 (55%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT---RLTHSRIRRTL 86
           +++ W+ N KKI  HN E   G H Y L  NH  D+    + + M    + T  + + +L
Sbjct: 49  RRMVWEKNLKKIEMHNLEHTMGKHSYRLGMNHFGDMTNEEFRQTMNGYKQTTERKFKGSL 108

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P     +  P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ F+ T ++  LS
Sbjct: 109 FMEPNY---LQAPKAVDWREKGYVTPVKDQGSCGSCWAFSTTGAMEGQQFRKTGKLVSLS 165

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y+Q   GL  EE YPY G  +  C +K      +
Sbjct: 166 EQNLVDCSRPEGNEGCNGGLMDQAFQYIQDNAGLDTEESYPYVGTDEDPCHYKPEFSGAN 225

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   EHA+   +A VGP++V+I+A   +FQ Y  GIY ++ C+S+ ++H +L+
Sbjct: 226 ETGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYEFGIYYEKECSSEELDHGVLV 285

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  + Y L+
Sbjct: 286 VGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATASSYPLV 338


>gi|21489677|gb|AAM55195.1|AF412313_1 cathepsin L cysteine protease [Haemonchus contortus]
 gi|21483192|gb|AAL14224.1| cathepsin L [Haemonchus contortus]
          Length = 354

 Score =  208 bits (530), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 111/282 (39%), Positives = 163/282 (57%), Gaps = 17/282 (6%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNES----- 95
           I  HN+E + G   + +  N ++DL    Y K    L   R+RR    S +SN +     
Sbjct: 77  IEEHNKEHRLGRKTFEMGLNEIADLPFSQYRK----LNGYRMRRQFGDSLQSNGTKFLVP 132

Query: 96  --VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
             V IP+ +DWRE+G +TP  NQ  CG+C+AFS   A++GQ  ++T ++  LS Q +VDC
Sbjct: 133 FNVQIPESVDWREEGLVTPVKNQGMCGSCWAFSSTGALEGQHARATGKLVSLSEQNLVDC 192

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GN GC GG +     Y++   G+  E+ YPY G+++ C FKR  +  D   +  LP
Sbjct: 193 STKYGNHGCNGGLMDLAFEYIKENHGVDTEDSYPYVGRETKCHFKRNAVGADDKGFVDLP 252

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
             DE ALK  +AT GPI+++I+A   +FQLY  G+Y DE C+S+ ++H +LLVGY  +  
Sbjct: 253 EGDEEALKKAVATQGPISIAIDAGHRSFQLYKKGVYFDEECSSEELDHGVLLVGYGTDPE 312

Query: 273 ----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               W++KN W   WG+ GY+ + R  NN CG+A  A Y L+
Sbjct: 313 AGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGVATKASYPLV 354


>gi|269784818|ref|NP_001161481.1| cathepsin L1 precursor [Gallus gallus]
          Length = 353

 Score =  208 bits (530), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/304 (37%), Positives = 166/304 (54%), Gaps = 12/304 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + KDY ++  +S +++ W+ N K I  HN +   G H Y L  N   D+    + + M  
Sbjct: 51  HSKDYHER-EESWRRVVWEKNLKMIELHNLDHSLGKHSYKLGMNQFGDMTAEEFRQLMNG 109

Query: 77  LTHSRIRRTLVRSPESNESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
             H +  R    S     S L  P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ 
Sbjct: 110 YKHKKSERKYRGSQFLEPSFLEAPRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQH 169

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK-QSI 194
           F+ T ++  LS Q +VDCS   GN GC GG +     YVQ  GG+  EE YPY  K    
Sbjct: 170 FRKTGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDED 229

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C++K      + + +  +P   E AL   +A+VGP++V+I+A   +FQ Y SGIY +  C
Sbjct: 230 CRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDC 289

Query: 255 TSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAV 305
           +S+ ++H +L+VGY         +  WI+KN W   WGD GY+Y+ K   N CGIA  A 
Sbjct: 290 SSEDLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAAS 349

Query: 306 YALI 309
           Y L+
Sbjct: 350 YPLV 353


>gi|354504703|ref|XP_003514413.1| PREDICTED: cathepsin R-like [Cricetulus griseus]
 gi|344245863|gb|EGW01967.1| Cathepsin R [Cricetulus griseus]
          Length = 333

 Score =  208 bits (530), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/305 (37%), Positives = 172/305 (56%), Gaps = 13/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y ++  + +K+  W+ N K I   + E   G++ +T+  N   DL      K 
Sbjct: 33  KKSYDKTYSQE-EERQKRAVWEDNVKMIKLLSMENGLGMNNFTVEMNEFGDLTGEEMRKM 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           MT  +   +R    +  +    V I   LDWR +G++ P   Q  CGAC+AF++A +I+G
Sbjct: 92  MTDSSVLTLRNG--KHIQKRGDVKIHKTLDWRTQGYVGPVRRQNGCGACWAFALAGSIEG 149

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+FK T ++ +LS+Q ++DCS   G  GC GG L N   YV+  GGL  E  YPY+ K+ 
Sbjct: 150 QMFKKTGKMTQLSVQNLIDCSRTYGTNGCKGGRLYNAFQYVKNNGGLEAEATYPYESKEG 209

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+++    VV I+ + V+ P++E AL   L T GPIAV I+A   +F  YA G+Y +  
Sbjct: 210 RCRYRAERSVVKITRFLVV-PRNEEALMNALVTHGPIAVGIDAGHESFTNYAGGMYHEPN 268

Query: 254 CTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           C  D   H++LLVG+         R  W++KN    +WG+NGYM + R  NN CGIA+YA
Sbjct: 269 CRRDSPTHSVLLVGFGYEGRESEGRKYWLIKNSHGENWGENGYMKIPRDQNNYCGIASYA 328

Query: 305 VYALI 309
           +Y ++
Sbjct: 329 MYPVL 333


>gi|39930363|ref|NP_058817.1| cathepsin J precursor [Rattus norvegicus]
 gi|84028185|sp|Q63088.2|CATJ_RAT RecName: Full=Cathepsin J; AltName: Full=Cathepsin L-related
           protein; AltName: Full=Cathepsin P; AltName:
           Full=Catlrp-p; Flags: Precursor
 gi|28196048|gb|AAL26793.2| cathepsin P [Rattus norvegicus]
 gi|66910531|gb|AAH97263.1| Cathepsin J [Rattus norvegicus]
 gi|149039736|gb|EDL93852.1| cathepsin J [Rattus norvegicus]
          Length = 334

 Score =  208 bits (530), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/307 (36%), Positives = 173/307 (56%), Gaps = 17/307 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + KY K Y     + K+ + W+ N K I  HN+E   G +G+T+  N  +D     + K 
Sbjct: 33  KTKYAKSYSPVEEELKRAV-WEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKS 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           ++ +    +    V +P + + V I  P+  DWR++G++TP  NQ  CG+C+AF+   AI
Sbjct: 92  LSDI----LIPAAVTNPSAQKQVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAI 147

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+F  T  +  LS+Q ++DCS   GN GC  G+     NYV    GL  E  YPY+GK
Sbjct: 148 EGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGK 207

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N   +I+ +  LPP +E  L V +A++GP++ +I+AS  +F+ Y+ G+Y +
Sbjct: 208 DGPCRYHSENASANITGFVNLPP-NELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHE 266

Query: 252 EACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIAN 302
             C+S  VNHA+L+VGY          N W++KN W   WG NG+M + K  NN CGIA+
Sbjct: 267 PNCSSYVVNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGINGFMKIAKDRNNHCGIAS 326

Query: 303 YAVYALI 309
            A +  I
Sbjct: 327 QASFPDI 333


>gi|187960088|ref|NP_062414.3| cathepsin 8 precursor [Mus musculus]
 gi|8917581|gb|AAF81277.1|AF250840_1 EPCS68 [Mus musculus]
 gi|16445019|gb|AAK00509.1| cathepsin 2 precursor [Mus musculus]
 gi|26340210|dbj|BAC33768.1| unnamed protein product [Mus musculus]
 gi|148709369|gb|EDL41315.1| cathepsin 8 [Mus musculus]
          Length = 333

 Score =  208 bits (530), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/305 (37%), Positives = 169/305 (55%), Gaps = 13/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++K+ K+Y  +  + +K+  W+ N K +  HN E  QG   +T+  N   D+    Y K 
Sbjct: 33  KRKFNKNYSME-EEGQKRAVWEENMKLVKQHNIEYDQGKKNFTMDVNAFGDMTGEEYRKM 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           +T +     R+   +S     +  +P  +DWR++G +TP  NQ  C +C+AFS A AI+G
Sbjct: 92  LTDIPVPNFRKK--KSIHQPIAGYLPKFVDWRKRGCVTPVKNQGTCNSCWAFSAAGAIEG 149

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+F+ T ++  LS Q +VDCS + GN GC  GS    L YV    GL  E  YPYKG   
Sbjct: 150 QMFRKTGKLVPLSTQNLVDCSRLEGNFGCFKGSTFLALKYVWKNRGLEAESTYPYKGTDG 209

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C++        I+S+S +    E  L   +AT+GPI+V I+A   +F+LY  GIY +  
Sbjct: 210 HCRYHPERSAARITSFSFV-SNSEKDLMRAVATIGPISVGIDARHKSFRLYREGIYYEPK 268

Query: 254 CTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           C+S+ +NH++L+VGY            W++KN     WG NGYM L RG NN CGIA+YA
Sbjct: 269 CSSNIINHSVLVVGYGYEGKESDGNKYWLIKNSHGEQWGMNGYMKLARGRNNHCGIASYA 328

Query: 305 VYALI 309
           VY  +
Sbjct: 329 VYPRV 333


>gi|327263389|ref|XP_003216502.1| PREDICTED: cathepsin L1-like [Anolis carolinensis]
          Length = 339

 Score =  208 bits (530), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/293 (38%), Positives = 162/293 (55%), Gaps = 14/293 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N K I  HN +   G H Y L  NH  D+    + + M    HS+  +   R 
Sbjct: 48  RRMIWEKNLKMIQLHNLDHSLGKHSYRLGMNHFGDMTNEEFRQVMNGYKHSKTEKKY-RG 106

Query: 90  PESNES--VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
            E  E   +++P  +DWREKG++TP  +Q  CG+C+AFS   +++GQ F+ T ++  LS 
Sbjct: 107 SEFLEPNFLVVPKSVDWREKGYVTPVKDQGQCGSCWAFSTTGSLEGQHFRKTGKLVSLSE 166

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-ICKFKRPNIVVDI 206
           Q +VDCS   GN GC GG +     Y+   GG+  EE YPY  K    C +K      + 
Sbjct: 167 QNLVDCSRPEGNQGCNGGLMDQAFEYIADNGGIDSEESYPYIAKDDEDCLYKSEFNAAND 226

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  +P   E AL   +A VGP++V+I+AS  TFQ Y SGIY D  C+S+ ++H +L+V
Sbjct: 227 TGFVDVPEGHERALMKAVAAVGPVSVAIDASHSTFQFYESGIYYDPDCSSEELDHGVLVV 286

Query: 267 GY---------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY          +  WI+KN WS  WGD GY+ + K  NN CGIA  A Y L+
Sbjct: 287 GYGFEGTDDDNKKKYWIVKNSWSDKWGDKGYILMAKDRNNHCGIATAASYPLV 339


>gi|45946482|gb|AAH68241.1| Cathepsin 8 [Mus musculus]
          Length = 333

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/305 (37%), Positives = 169/305 (55%), Gaps = 13/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++K+ K+Y  +  + +K+  W+ N K +  HN E  QG   +T+  N   D+    Y K 
Sbjct: 33  KRKFNKNYSME-EEGQKRAVWEENMKLVKQHNIEYDQGKKNFTMDVNAFGDMTGEEYRKM 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           +T +     R+   +S     +  +P  +DWR++G +TP  NQ  C +C+AFS A AI+G
Sbjct: 92  LTDIPVPNFRKK--KSIHQPIAGYLPKFVDWRKRGCVTPVKNQGTCNSCWAFSAAGAIEG 149

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+F+ T ++  LS Q +VDCS + GN GC  GS    L YV    GL  E  YPYKG   
Sbjct: 150 QMFRKTGKLVPLSTQNLVDCSRLEGNFGCFKGSTFLALKYVWKNRGLEAESTYPYKGTDG 209

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C++        I+S+S +    E  L   +AT+GPI+V I+A   +F+LY  GIY +  
Sbjct: 210 HCRYHPERSAARITSFSFV-SNSEKDLMRAVATIGPISVGIDARHKSFRLYREGIYYEPK 268

Query: 254 CTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           C+S+ +NH++L+VGY            W++KN     WG NGYM L RG NN CGIA+YA
Sbjct: 269 CSSNIINHSVLVVGYGYEGKESDGNKYWLIKNSHGEQWGMNGYMKLARGRNNHCGIASYA 328

Query: 305 VYALI 309
           VY  +
Sbjct: 329 VYPRV 333


>gi|62945374|ref|NP_001017509.1| uncharacterized protein LOC498688 precursor [Rattus norvegicus]
 gi|60552853|gb|AAH91563.1| Similar to cathepsin R [Rattus norvegicus]
 gi|149039732|gb|EDL93848.1| similar to cathepsin R [Rattus norvegicus]
          Length = 334

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/308 (37%), Positives = 164/308 (53%), Gaps = 18/308 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +KKY K Y  +  + ++ + W+ N K I  HN E   G +G+T+  N   D     + K 
Sbjct: 33  KKKYDKSYSLEEEELRRAV-WEENLKMIKLHNGENGLGKNGFTMEINEFGDTTGEEFRKM 91

Query: 74  MTRL---THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           M      TH   +  + R+  S    + P  +DWR+KG++TP   Q +C AC+AFS+  A
Sbjct: 92  MVEFPVQTHREGKSIMKRAAGS----IFPKFVDWRKKGYVTPVRRQGNCNACWAFSVTGA 147

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           I+ Q    + ++  LS+Q +VDCS   GN GC GG   N   YV   GGL  E  YPY+G
Sbjct: 148 IEAQTIWQSGKLIPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLQSEATYPYEG 207

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           K   C++   N   +I+ +  L P+ E  L V +AT+GPI+  I+AS  +F+ Y  GIY 
Sbjct: 208 KDGPCRYNPKNSSAEITGFVSL-PESEDILMVAVATIGPISAGIDASHESFKFYKKGIYH 266

Query: 251 DEACTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIA 301
           +  C+S+ V H +L+VGY            W++KN W   WG  GYM + K  NN C IA
Sbjct: 267 EPNCSSNSVTHGVLVVGYGFKGNDTGGDHYWLIKNSWGKQWGIRGYMKITKDKNNHCAIA 326

Query: 302 NYAVYALI 309
           +YA Y  I
Sbjct: 327 SYAHYPTI 334


>gi|320164780|gb|EFW41679.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 13/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ + K Y     +  ++  W++N   +  HN     G+H YTL  N  +DL      R 
Sbjct: 34  KRTFGKSYSDAVEEINRRAVWEANKMLVDAHNGA---GIHSYTLGMNIFADLTHEEFKRF 90

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+     L   R   +    P +N   L PD +DWR  G +TP  +Q  CG+C++FS   
Sbjct: 91  YLGTKVDLNRPRSNFSSTFIPTANVGAL-PDSVDWRTAGIVTPVKDQGQCGSCWSFSTTG 149

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           +++GQ  + T ++  LS Q +VDCS   GN GC GG + +   Y+    G+  E  YPY 
Sbjct: 150 SVEGQHARKTGQLVSLSEQNLVDCSKAQGNQGCNGGLMDDAFQYIITNKGIDTEASYPYT 209

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            K   CKF   N+   +SS+  +    E  L+  +ATVGP++V+I+AS ++FQLY SG+Y
Sbjct: 210 AKDGTCKFNAANVGATLSSFQDITRGSESDLQNAVATVGPVSVAIDASKNSFQLYTSGVY 269

Query: 250 DDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKR-GNNRCGIANYA 304
           +++ C+S  ++H +L  GY T N    W++KN W   WG  GY+++ R  NN+CGIA  A
Sbjct: 270 NEKKCSSTSLDHGVLAAGYGTSNGTPYWLVKNSWGSSWGQAGYIWMSRNANNQCGIATSA 329

Query: 305 VYALI 309
            Y ++
Sbjct: 330 SYPIV 334


>gi|29165304|gb|AAO65603.1| cathepsin L precursor [Hydra vulgaris]
          Length = 324

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 176/314 (56%), Gaps = 16/314 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + ++ WI   ++  K Y  D      ++ +   W+ N ++I  HN +       + L+ N
Sbjct: 22  VKDESWIQWKMYHNKVYSHD----GEETVRYTIWKDNERRIREHNLKGGD----FILKMN 73

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCG 120
              D+    +      L+H  +  +   +P +    + PD +DWR +G++TP  +Q  CG
Sbjct: 74  QFGDMTNSEFKAFNGYLSHKHVNGSTFLTPNN---FVAPDTVDWRNEGYVTPVKDQGQCG 130

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+AFS   +++GQ FK T ++  LS Q +VDCS   GN GC GG + N   Y++   G+
Sbjct: 131 SCWAFSTTGSLEGQHFKKTGKLVSLSEQNLVDCSTAYGNNGCDGGLMDNAFTYIKENKGI 190

Query: 181 MKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
             E  YPY  +   C FK+ ++    + +  +P  +E+ LK  +A+VGPI+V+I+AS  +
Sbjct: 191 DSEASYPYTAEDGKCVFKKSSVAATDTGFVDIPEGNENKLKEAVASVGPISVAIDASHES 250

Query: 241 FQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKR-GN 295
           FQ Y+SG+Y++ +C+S  ++H +L+VGY   S    W++KN W+  WGD GY+ ++R   
Sbjct: 251 FQFYSSGVYNEPSCSSTELDHGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMRRNAK 310

Query: 296 NRCGIANYAVYALI 309
           N+CGIA  A Y L+
Sbjct: 311 NQCGIATKASYPLV 324


>gi|345320664|ref|XP_001521690.2| PREDICTED: cathepsin L1-like [Ornithorhynchus anatinus]
          Length = 388

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/318 (36%), Positives = 170/318 (53%), Gaps = 16/318 (5%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           +K W +   + QK Y K     A +  +++ W+ N K I  HN E   GLH Y L  N  
Sbjct: 76  DKHWELWKNWHQKSYHK-----AEEGWRRMVWEENLKVIELHNLEQSLGLHTYQLGMNQF 130

Query: 63  SDLHPRHYIKEMTRLTH-SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGA 121
            DL    + + +    H S   R    +      V +P  +DWR+ G++TP  NQ  CG+
Sbjct: 131 GDLTNEEFQQMLISERHFSEGNRINGSAFLEVNYVQVPTSVDWRDHGYVTPVKNQGHCGS 190

Query: 122 CYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLM 181
           C+AFS   A++GQ+F+ +  +  LS Q +VDCS   GN GC GG +     Y+    G+ 
Sbjct: 191 CWAFSTTGALEGQLFRKSGRLVSLSEQNLVDCSWQQGNQGCNGGIVDFAFQYILENRGID 250

Query: 182 KEEDYPYKGKQSI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
            E+ YPY  K +  C FK       ++ +  +PP  E AL   +ATVGP++V+I+A P +
Sbjct: 251 SEDCYPYTAKDTAQCAFKPECATARVTGFVDIPPHSEEALMKAVATVGPVSVAIDAHPTS 310

Query: 241 FQLYASGIYDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL- 291
           F+ Y SGI+ +  C+S+ +NHA+L+VGY         +  WI+KN W   WGD+GY YL 
Sbjct: 311 FRFYQSGIFYEPKCSSERLNHAVLVVGYGYEGEDEAGKKYWIVKNSWGKQWGDHGYFYLS 370

Query: 292 KRGNNRCGIANYAVYALI 309
           K   N CGIA  A Y L+
Sbjct: 371 KDRGNHCGIATTASYPLL 388


>gi|348565223|ref|XP_003468403.1| PREDICTED: cathepsin L1-like [Cavia porcellus]
          Length = 333

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 16/291 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W+ N + I  HN E  QG H +TL  NH  D+    + + M    H + +   +  
Sbjct: 48  RRAVWEKNLRMIELHNGEYSQGRHSFTLGMNHFGDMTNEEFRQVMNGFQHQKHKTGKMY- 106

Query: 90  PESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
               E +L+  P  +DWREKG++T   NQ  CG+C+AFS   +++GQ+F  T  +  LS 
Sbjct: 107 ---QEPLLLQLPKSVDWREKGYVTEVKNQGQCGSCWAFSATGSLEGQMFHKTGNLVSLSE 163

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDIS 207
           Q +VDCS   GN GC GG +     YV+   GL  E+ YPY GK   CK+K P +     
Sbjct: 164 QNLVDCSRPQGNQGCNGGLMDFAFQYVKDNKGLEAEKSYPYVGKDGECKYK-PELSAAND 222

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
           +  V  PQ E  ++  LATVGP++V+I+A   +FQ Y  GIY D  C+S  +NH +LLVG
Sbjct: 223 TGFVDVPQREKVVQKALATVGPLSVAIDAGLQSFQFYKEGIYYDPGCSSRDLNHGVLLVG 282

Query: 268 YTRNS--------WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           Y  ++        W++KN W   WG +GY+ + R  NN CG+A  A Y L+
Sbjct: 283 YGTDASETGKGDYWLIKNSWGTTWGADGYVKIARNRNNHCGVATAASYPLV 333


>gi|301769891|ref|XP_002920367.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
 gi|281346353|gb|EFB21937.1| hypothetical protein PANDA_009084 [Ailuropoda melanoleuca]
          Length = 333

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/297 (37%), Positives = 167/297 (56%), Gaps = 16/297 (5%)

Query: 24  KATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIR 83
           K  + +++  W+ N K I  HN+E  QG H +T+  N   DL    + + +  L   +  
Sbjct: 42  KDEEGQRRRVWEKNMKMIDQHNEEYSQGQHSFTMAMNAFGDLTSEEFKQVLNDLKIQKPE 101

Query: 84  R-TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
              + ++P   E   IP  +DWREKG++TP   Q  C +C+AFS   A++GQ+F+ T ++
Sbjct: 102 EGNVFQAPLFAE---IPASVDWREKGYVTPVKYQGHCQSCWAFSATGALEGQMFRKTGKL 158

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI 202
             LS Q +VDCS    N GC GG + N   YV+  GGL   E YPY G+   CK++    
Sbjct: 159 VSLSEQNLVDCSWPQNNDGCRGGLMDNAFRYVKDNGGLDSAESYPYLGRNESCKYRPEKS 218

Query: 203 VVDISS-WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNH 261
             ++++ WSV   +D   L  T+ATVGP++ ++++S H+FQ Y  GIY D  C S+ +NH
Sbjct: 219 AANLTTFWSVSNKED--GLMTTVATVGPVSAAVDSSLHSFQFYKKGIYYDPNCRSNRLNH 276

Query: 262 AMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           A+L+VGY         +  WI+KN W  +WG  GYM L K  +N CGIA  A + ++
Sbjct: 277 AVLVVGYGFEGEESENKKYWIIKNSWGTNWGMKGYMLLAKDRDNHCGIATMASFPVV 333


>gi|291383488|ref|XP_002708302.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 344

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/290 (39%), Positives = 165/290 (56%), Gaps = 16/290 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W+ N + I  HN+E  QG HG+T+  N   D+    +   M    +   +R     
Sbjct: 48  RRAVWEKNMQMIEKHNREYSQGKHGFTMAMNAYGDMTNEEFRLMMNGFENQNHKR----G 103

Query: 90  PESNESVL--IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
            E + S+L  IP  LDWRE+G++TP  NQE CG+ +AFS   A++GQ+F+ T  +  LS 
Sbjct: 104 EEFHNSLLFKIPAFLDWRERGYVTPVKNQELCGSSWAFSATGALEGQMFRKTGRLVSLSE 163

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDIS 207
           Q +VDCS   GN GC+GG +     YV+   GL  EE YPY+ ++  CK+       +++
Sbjct: 164 QNLVDCSWPQGNQGCSGGLMDYAFQYVKDNRGLDSEESYPYEQRKGSCKYNPRFSAANVT 223

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
            + V   +DE AL   +ATVGP++V I  +P +F  Y  GIY D  C+S+ VNHA+L+VG
Sbjct: 224 GF-VDVSKDEKALMEAVATVGPVSVGIATTPESFLFYEGGIYYDPKCSSENVNHAVLVVG 282

Query: 268 Y------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYAL 308
           Y      ++N+  W++KN W   WG  GYM + K  NN CGIA  A Y L
Sbjct: 283 YGFEEVGSKNNKYWLIKNSWGKDWGMGGYMKMAKDQNNHCGIATAASYPL 332


>gi|334332720|ref|XP_001367595.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 333

 Score =  207 bits (528), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 162/292 (55%), Gaps = 12/292 (4%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM----TRLTHSRI 82
           D  ++  W+ N K I  HN E   G H + L  N   D+    + + M    +  +  R 
Sbjct: 45  DGWRRATWEKNLKMIEMHNLEYSAGKHSFQLGMNKFGDMTTEEFKQVMNGYNSNGSQKRT 104

Query: 83  RRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
           + +L R P   +   +P  +DWREKG++TP  NQ  CG+C+AFS   +++GQ F  T ++
Sbjct: 105 KGSLYREPLLAQ---LPKSVDWREKGYVTPVKNQGQCGSCWAFSATGSLEGQWFHKTKKL 161

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI 202
             LS Q +VDCS   GN GC+GG + N   YV+  GG+  E+ YPY G+ + CK++    
Sbjct: 162 VSLSEQNLVDCSTSEGNNGCSGGLMDNAFEYVKNNGGIDTEQAYPYLGQDNECKYRAECS 221

Query: 203 VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHA 262
             +++ +  +P  +E AL   +A VGPI+V+I+A   +FQ Y SG+Y +  C+S  ++H 
Sbjct: 222 GANVTGFVDIPSMNERALMKAVANVGPISVAIDAGNPSFQFYESGVYYEPQCSSSQLDHG 281

Query: 263 MLLVGYTR----NSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           +L+VGY        WI+KN W   WG  GY+ + K  NN CGIA  A Y  +
Sbjct: 282 VLVVGYGSIGKDEYWIVKNSWGEEWGKKGYVLMAKFRNNHCGIATAASYPQV 333


>gi|318054062|ref|NP_001187179.1| cathepsin S precursor [Ictalurus punctatus]
 gi|190351079|gb|ACE75948.1| cathepsin S [Ictalurus punctatus]
          Length = 329

 Score =  207 bits (528), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/304 (38%), Positives = 173/304 (56%), Gaps = 12/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K Y  +  +  ++  W+ N + I  HN EA  G+H Y L  NH+ D+  R  I +
Sbjct: 30  KKNHSKTYTSELEELGRREIWERNLRLITVHNLEASLGMHTYDLGMNHMGDM-AREEILQ 88

Query: 74  M---TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           M   TR+  +  RR+      S  SV  PD +DWREKG++T   NQ  CG+C+AFS A A
Sbjct: 89  MFAGTRVPPNLTRRSSTFVASSGISV--PDSVDWREKGYVTEVKNQGSCGSCWAFSAAGA 146

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+ ++T +++ LS Q +VDCS   GN GC GG +     YV   GG+  +E YPY  
Sbjct: 147 LEGQLKRTTGQVKSLSPQNLVDCSSKYGNKGCNGGFMTEAFQYVIDNGGIDSDEAYPYTA 206

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C++ +     + SS++ +   DE ALK  +AT+GPI+V+I+A+   F LY SG+Y+
Sbjct: 207 MDGQCRYDQAQRAANCSSYNYVSQGDEEALKQAVATIGPISVAIDATRPMFILYHSGVYN 266

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D+  T  +    +  VGY      + W++KN W   +GD GY+ + R   N CGIANYA 
Sbjct: 267 DQTSTP-WFTFWVQDVGYGSLNGEDYWLVKNSWGPRFGDGGYIRIARNKGNMCGIANYAC 325

Query: 306 YALI 309
           Y L+
Sbjct: 326 YPLM 329


>gi|61200410|gb|AAX39778.1| cathepsin R [Mus musculus]
          Length = 335

 Score =  207 bits (528), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/307 (38%), Positives = 163/307 (53%), Gaps = 19/307 (6%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  K  +  K++ W+   K I  HN+E   G +G+T++ N   D     + K M 
Sbjct: 35  KYNKSYSLK-EEKLKRVVWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMI 93

Query: 76  RL---THSRIRRTLVRSPESNESVLIPDHLDWR-EKGFITPDWNQEDCGACYAFSIASAI 131
            +   TH   +  + R   S    ++P  +DWR +KG++TP   Q DC AC+AF++  AI
Sbjct: 94  EISVWTHREGKSIMKREAGS----ILPKFVDWRTKKGYVTPVRRQGDCDACWAFAVTGAI 149

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           + Q    T ++  LS+Q +VDCS   GN GC GG   N   YV   GGL  E  YPY+GK
Sbjct: 150 EAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGK 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N   +I+ +  L PQ E  L   +AT+GPI   I+AS  +F+ Y  GIY +
Sbjct: 210 DGPCRYNPKNSKAEITGFVSL-PQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHE 268

Query: 252 EACTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIAN 302
             C+SD V H +L+VGY            W++KN W   WG  GYM L K  NN CGIA+
Sbjct: 269 PNCSSDTVTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKDKNNHCGIAS 328

Query: 303 YAVYALI 309
           YA Y  I
Sbjct: 329 YAHYPTI 335


>gi|449275508|gb|EMC84350.1| Cathepsin L1, partial [Columba livia]
          Length = 319

 Score =  207 bits (528), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/304 (37%), Positives = 165/304 (54%), Gaps = 12/304 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + KDY ++  +S +++ W+ N K I  HN +   G H Y L  N   D+    + + M  
Sbjct: 17  HNKDYHER-EESWRRVVWEKNLKMIELHNLDHTLGKHSYKLGMNQFGDMTTEEFRQLMNG 75

Query: 77  LTHSRIRRTLVRSPESNESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
             H +  R    S     S L  P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ 
Sbjct: 76  YAHKKSERKYRGSQFLEPSFLEAPRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQH 135

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-I 194
           F+ T ++  LS Q +VDCS   GN GC GG +     YVQ  GG+  EE YPY  K    
Sbjct: 136 FRKTGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDED 195

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C++K      + + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY +  C
Sbjct: 196 CRYKAEYNAANDTGFVDIPQGHERALMKAVAAVGPVSVAIDAGHSSFQFYQSGIYYEPDC 255

Query: 255 TSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAV 305
           +S+ ++H +L+VGY         +  WI+KN W   WGD GY+Y+ K   N CGIA  A 
Sbjct: 256 SSEDLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAAS 315

Query: 306 YALI 309
           Y L+
Sbjct: 316 YPLV 319


>gi|355681660|gb|AER96816.1| cathepsin L2 [Mustela putorius furo]
          Length = 334

 Score =  207 bits (528), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 13/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN+E  QG HG+T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFRNQKHRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E   IP  +DW +KG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFAE---IPKSVDWTQKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     Y++  GGL  EE YPY  + +     +P   V   +
Sbjct: 165 NLVDCSRSQGNQGCNGGLMDFAFQYIKDNGGLDSEESYPYLARDTDSCNYKPEYSVANDT 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  PQ E AL   +ATVGPI+V+I+A   +FQ Y SGIY D  C+S  ++H +L+VGY
Sbjct: 225 GFVDIPQRERALMKAVATVGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGY 284

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       WI+KN W   WG NGY+ + K  NN CGIA  A Y  +
Sbjct: 285 GFEGTDSNNNKFWIVKNSWGPEWGCNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|318065049|ref|NP_001187379.1| cathepsin K precursor [Ictalurus punctatus]
 gi|308322859|gb|ADO28567.1| cathepsin K [Ictalurus punctatus]
          Length = 331

 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 108/300 (36%), Positives = 167/300 (55%), Gaps = 11/300 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           ++K+Y     D+ ++  W+ N + I +HNQE + GLH Y L  NHL D+      +++  
Sbjct: 36  HRKEYNGLGEDAIRRSVWEKNMRLIESHNQEYELGLHTYELGMNHLGDMTTEEVAEKLLG 95

Query: 77  LTHSRIRRTL-VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           L        L    P+S +   +P  +D+R+ G++TP  NQ  CG+C+AFS   A++GQ+
Sbjct: 96  LQVPMDNDPLNTYYPDSLDK--LPKSIDYRKLGYVTPVRNQGSCGSCWAFSSVGALEGQL 153

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
            K+T ++  LS Q +VDC  ++ N GC GG + N  +YV+  GG+  EE YPY G+   C
Sbjct: 154 MKTTGKLVNLSPQNLVDC--VTENDGCGGGYMTNAFSYVRDNGGIDSEEAYPYVGQDQQC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
            + +     +   +  +    E+AL   +A VGP++V I+A   TFQ Y  G+Y D  C 
Sbjct: 212 AYNKSGKAAECRRFKEVKKGSEYALASAVAKVGPVSVGIDAMQSTFQFYKRGVYYDPNCD 271

Query: 256 SDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
            + +NHA+L VGY      +  WI+KN W   WG  GY+ + R  NN CGIAN A + ++
Sbjct: 272 KESINHAVLAVGYGATPKGKKHWIVKNSWGEEWGMKGYVLMARNRNNACGIANLASFPVM 331


>gi|149617838|ref|XP_001521715.1| PREDICTED: cathepsin L1-like [Ornithorhynchus anatinus]
          Length = 338

 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/306 (36%), Positives = 166/306 (54%), Gaps = 11/306 (3%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           K + +    +A +  ++  W+ N K I  HN E   GLH Y L  N   DL    + + +
Sbjct: 33  KNWHQKSYHEAEEGWRRTVWEENLKAIQLHNLEQSLGLHTYRLGMNQFGDLTNEEFQEIL 92

Query: 75  TRLTH-SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           T   H S+  R    +      V +P  +DWR+ G++TP  NQ  CG+C+AFS   A++G
Sbjct: 93  TGERHFSKGNRINGSAFLEANFVQVPTSVDWRDHGYVTPVKNQGHCGSCWAFSTTGALEG 152

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+F+ +  +  LS Q +VDCS   GN GC GG +     Y+    G+  E+ YPY  K +
Sbjct: 153 QLFRKSGRLISLSEQNLVDCSWQQGNQGCHGGIVDLAFQYILQNQGIDSEDCYPYTAKDT 212

Query: 194 I-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C FK       ++ +  +PP  E AL   +ATVGP++V I+AS  +F+ Y SGI+ D 
Sbjct: 213 AQCTFKPECATAPVTGFVDIPPHSEEALMKAVATVGPVSVGIDASSTSFRFYQSGIFYDP 272

Query: 253 ACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANY 303
            C+S+ ++HA+L+VGY         +  WI+KN W  HWGD GY+Y+ K   N CGIA  
Sbjct: 273 KCSSESLDHAVLVVGYGYEREDEAGKKYWIVKNSWGKHWGDRGYVYMSKDRGNHCGIATV 332

Query: 304 AVYALI 309
           A Y L+
Sbjct: 333 ASYPLL 338


>gi|340370270|ref|XP_003383669.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 326

 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 165/304 (54%), Gaps = 24/304 (7%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  K T+ ++++ W+SN K +  HN  + +   G+T+  N  +DL    +     
Sbjct: 29  KYNKVYETKETELERQIIWESNKKFVENHNANSDK--FGFTVAMNEFADLDAGEF----- 81

Query: 76  RLTHSRIRRTLVRSPESNES--------VLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
               + I   L+  P S  S        V + D +DWREKG +T   NQ  CG+C++FS 
Sbjct: 82  ----ANIYNGLLPRPASYNSTKLFKKTGVSVGDTVDWREKGAVTEVKNQGKCGSCWSFSS 137

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             +++GQ F  T  +  LS QQ++DCS   GN GC GG + N+  Y++   G M EE YP
Sbjct: 138 TGSLEGQHFLKTGTLSSLSEQQLMDCSTSFGNHGCKGGLMDNSFRYLETVAGDMSEEMYP 197

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y  +   C+++    +   + +  +P  DE ALK  +ATVGPI+V+I+A   +FQLY  G
Sbjct: 198 YTAEDGFCRYRSSEAIAKDTGYKDIPRGDEDALKEAVATVGPISVAIDAGHRSFQLYHEG 257

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           IY + AC+S  ++H +L VGY        W++KN W   WG+ GY+ + R   N CGIA 
Sbjct: 258 IYYEPACSSTKLDHGVLAVGYGTGEGEEYWLVKNSWGPSWGNEGYVMMSRNRENNCGIAT 317

Query: 303 YAVY 306
            A Y
Sbjct: 318 QASY 321


>gi|21483190|gb|AAL14223.1| cathepsin L [Dictyocaulus viviparus]
          Length = 347

 Score =  207 bits (527), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 111/282 (39%), Positives = 159/282 (56%), Gaps = 17/282 (6%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLI-- 98
           I  HN E + G   + +  N+++DL       E  +L   R RR    S   N +  +  
Sbjct: 70  IEEHNHEHRLGRKTFEMGLNNIADLP----FSEYRKLNGYRHRRLFGDSMRKNGTKFLVP 125

Query: 99  -----PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
                PD +DWRE   +TP  NQ  CG+C+AFS   A++GQ F++T ++  LS Q +VDC
Sbjct: 126 FNVKAPDSVDWREHNLVTPVKNQGMCGSCWAFSATGALEGQHFRATGKLVSLSEQNLVDC 185

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GN GC GG +     Y++   G+  EE YPY GK+  C FK+ +I  +   +  LP
Sbjct: 186 STKYGNHGCNGGLMDLAFEYIKDNHGIDTEEGYPYVGKEMRCHFKKRDIGAEDRGFVDLP 245

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
             DE ALKV +AT GPI+++I+A   +FQLY  G+Y DE C+S+ ++H +LLVGY  +  
Sbjct: 246 EGDEDALKVAVATQGPISIAIDAGHRSFQLYKKGVYFDEECSSEELDHGVLLVGYGTDPE 305

Query: 273 ----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               WI+KN W   WG+ GY+ + R  NN CG+A  A Y L+
Sbjct: 306 AGDYWIIKNSWGTKWGEKGYVRIARNRNNHCGVATKASYPLV 347


>gi|158268255|gb|ABW25047.1| cathepsin L-like protease [Strongylus vulgaris]
          Length = 354

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 17/282 (6%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNES----- 95
           I  HNQE + G   + +  N ++DL    Y K    L   R RR    S +SN +     
Sbjct: 77  IDEHNQEHRLGRKTFEMGLNSIADLPFSQYRK----LNGYRHRRNFGDSMQSNGTKWLAP 132

Query: 96  --VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
             V IPD +DWR+KG +T   NQ  CG+C+AFS   A++GQ  +++ ++  LS Q +VDC
Sbjct: 133 FNVEIPDSVDWRDKGLVTDVKNQGMCGSCWAFSATGALEGQHARASGKMVSLSEQNLVDC 192

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GN GC GG +     Y++   G+  EE YPY G+++ C FK+ +I  +   +  LP
Sbjct: 193 STKYGNHGCNGGLMDLAFEYIKDNHGIDTEESYPYVGRETKCHFKKKDIGAEDKGFVDLP 252

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
             DE ALKV +AT GPI+++I+A   TFQLY  G+Y DE C+S+ ++H +LLVGY  +  
Sbjct: 253 EGDEEALKVAVATQGPISIAIDAGHRTFQLYKKGVYYDEECSSEELDHGVLLVGYGTDPE 312

Query: 273 ----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               W++KN W   WG+ GY+ + R  +N CG+A  A Y L+
Sbjct: 313 AGDYWLIKNSWGPGWGEKGYIRIARNRSNHCGVATKASYPLV 354


>gi|158268253|gb|ABW25046.1| cathepsin L-like protease [Strongylus vulgaris]
          Length = 354

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 112/282 (39%), Positives = 163/282 (57%), Gaps = 17/282 (6%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNES----- 95
           I  HNQE + G   + +  N ++DL    Y K    L   R RR    S +SN +     
Sbjct: 77  IDEHNQEHRLGRKTFEMGLNSIADLPFSQYRK----LNGYRHRRNFGDSMQSNGTKWLAP 132

Query: 96  --VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
             V IPD +DWR+KG +T   NQ  CG+C+AFS   A++GQ  +++ ++  LS Q +VDC
Sbjct: 133 FNVEIPDSVDWRDKGLVTDVKNQGMCGSCWAFSATGALEGQHARASGKMVSLSEQNLVDC 192

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GN GC GG +     Y++   G+  EE YPY G+++ C FK+ +I  +   +  LP
Sbjct: 193 STKYGNHGCNGGLMDLAFEYIKDNHGIDTEESYPYVGRETKCHFKKKDIGAEDKGFVDLP 252

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
             DE ALKV +AT GPI+++I+A   TFQLY  G+Y DE C+S+ ++H +LLVGY  +  
Sbjct: 253 EGDEEALKVAVATQGPISIAIDAGHRTFQLYKKGVYYDEECSSEELDHGVLLVGYGTDPE 312

Query: 273 ----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               W++KN W   WG+ GY+ + R  +N CG+A  A Y L+
Sbjct: 313 AGDYWLIKNSWGPGWGEKGYIRIARNRSNHCGVATKASYPLV 354


>gi|94448674|emb|CAI91575.1| cathepsin L2 [Lubomirskia baicalensis]
          Length = 324

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 174/304 (57%), Gaps = 13/304 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY--I 71
           + ++ K YR    +  + + WQ+N K I  HNQ A  G+ GYTL+ N   DL    +  +
Sbjct: 26  KAEHGKSYRNHKEEMLRHVTWQANKKYIDEHNQHA--GVFGYTLKMNQFGDLENSEFKSL 83

Query: 72  KEMTRLTHS-RIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
               R++++ R  +  V +    +   +P  +DW +KG++TP  NQ  CG+C++FS   +
Sbjct: 84  YNGYRMSNAPRKGKPFVPAARVQD---LPASVDWSKKGWVTPVKNQGQCGSCWSFSATGS 140

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ F +T  +  LS Q +VDCS   GN GC GG + +   YV    G+  E  YPY+ 
Sbjct: 141 MEGQHFNATGTLMSLSEQNLVDCSAAEGNHGCNGGLMDDAFEYVIKNNGIDTEASYPYRA 200

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
             S CKF   ++   IS +  +    E  L+V +AT+GP++V+I+AS  +FQ Y+SG+YD
Sbjct: 201 VDSTCKFNTADVGATISGYVDVTKDSESDLQVAVATIGPVSVAIDASHISFQFYSSGVYD 260

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
              C+S  ++H +L VGY    +++ W++KN W   WG +GY+ + R  NN+CGIA  A 
Sbjct: 261 PLICSSTNLDHGVLAVGYGTDGSKDYWLVKNSWGASWGMSGYIEMVRNHNNKCGIATSAS 320

Query: 306 YALI 309
           Y ++
Sbjct: 321 YPVV 324


>gi|66378018|gb|AAY45870.1| cathepsin L-like cysteine proteinase [Rotylenchulus reniformis]
          Length = 369

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 109/310 (35%), Positives = 177/310 (57%), Gaps = 20/310 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +++++K Y+ +  ++++ L + SN + I  HNQ  ++G   +++ ENH++DL    Y K 
Sbjct: 66  KQQHEKSYKNQQLETERMLAYLSNKQFIDKHNQAFREGKKSFSIGENHIADLPFSEYKK- 124

Query: 74  MTRLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDWNQEDCGACYAF 125
                 +  RR L  +   N S          IP+ +DWR+K ++T   NQ  CG+C+AF
Sbjct: 125 -----LNGYRRALGDNLRRNASTFLAPMNIGDIPESVDWRDKQWVTEVKNQGQCGSCWAF 179

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           S   A++GQ  + T ++  LS Q +VDC+   GN+GC GG + N   Y++   G+ KE  
Sbjct: 180 SATGALEGQHARKTGQLVSLSEQNLVDCTKKYGNMGCNGGLMDNAFQYIKDNEGIDKEMT 239

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPYK K   C FKR ++    + +  +   DE  LK+ +AT GP++V+I+A   +FQLY 
Sbjct: 240 YPYKAKAGRCHFKRNDVGATDTGFFDVAEGDEDKLKLAVATQGPVSVAIDAGHRSFQLYK 299

Query: 246 SGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
            G+Y +E C  + ++H +L+VGY  +      WI+KN WS HWG+ GY+ +    NN CG
Sbjct: 300 HGVYFEEECNPEELDHGVLVVGYGTDPEHGDYWIVKNSWSTHWGEQGYIRMAPNRNNNCG 359

Query: 300 IANYAVYALI 309
           I ++A Y  +
Sbjct: 360 IPSHASYPTV 369


>gi|163914459|ref|NP_001106314.1| cathepsin K precursor [Xenopus laevis]
 gi|159155477|gb|AAI54985.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 110/302 (36%), Positives = 167/302 (55%), Gaps = 8/302 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ Y K Y  +  + +++L W+ N K I +HN E  QGLH Y +  N L D+     ++ 
Sbjct: 32  KRTYHKQYNGQMDELQRRLIWEKNFKMITSHNFEYNQGLHTYEMAMNQLGDMTSEEVVRT 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           MT L  H R + T +          +PD +D+R+KG++TP  NQ  CG+C+AFS   A++
Sbjct: 92  MTGLKIHKRNKPTNLTFEHDKAPEKVPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALE 151

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+ K   ++  LS Q +VDC  +  N GC GG + N   YV+   G+  E+ YPY G+ 
Sbjct: 152 GQLKKKKGKLVVLSPQNLVDC--VKKNDGCGGGYMTNAFEYVRDNKGIDSEKAYPYVGED 209

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C +           +  +   +E ALK  +A VGP++V I+A   +FQ Y+ G+Y D+
Sbjct: 210 QECMYNVSGRAAACKGYKEVQEGNEKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDK 269

Query: 253 ACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYA 307
            C+++ +NHA+L VGY        WI+KN W   WGD GY+ + K   N CGIAN A Y 
Sbjct: 270 DCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEEWGDKGYILMAKDKGNACGIANLASYP 329

Query: 308 LI 309
           ++
Sbjct: 330 VM 331


>gi|157278115|ref|NP_001098156.1| cathepsin L precursor [Oryzias latipes]
 gi|50251128|dbj|BAD27581.1| cathepsin L [Oryzias latipes]
          Length = 336

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 114/306 (37%), Positives = 171/306 (55%), Gaps = 17/306 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT- 75
           + K+Y +K  +  ++L W+ N +KI  HN E   G H Y L  NH  D+    + + M  
Sbjct: 35  HSKNYHEK-EEGWRRLVWEKNLRKIELHNLEHSMGKHSYRLGMNHFGDMTHEEFRQIMNG 93

Query: 76  --RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
             R    +   +L   P   E+   P  +DWR+KG++TP  +Q  CG+C+AFS   A++G
Sbjct: 94  YKRREQRKYSGSLFMEPNFLEA---PRAVDWRDKGYVTPVKDQGQCGSCWAFSTTGALEG 150

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQ 192
           Q F+ T ++  LS Q +VDCS   GN GC GG +     YV+   GL  E+ YPYKG   
Sbjct: 151 QQFRKTGKLVSLSEQNLVDCSRPEGNEGCNGGLMDQAFQYVKDNQGLDSEDFYPYKGTDD 210

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C++      V+ + +  +P   E AL   +A+VGP++V+I+A   +FQ Y SGIY ++
Sbjct: 211 QPCQYNAQYSAVNDTGFVDIPSGKERALMKAVASVGPVSVAIDAGHESFQFYQSGIYFEK 270

Query: 253 ACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANY 303
            C+SD ++H +L+VGY         +  WI+KN WS  WGD G++Y+ K  +N CGIA  
Sbjct: 271 ECSSDELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGFIYMAKDRHNHCGIATA 330

Query: 304 AVYALI 309
           A Y L+
Sbjct: 331 ASYPLV 336


>gi|402770499|gb|AFQ98384.1| cathepsin L, partial [Hyalomma anatolicum anatolicum]
          Length = 312

 Score =  207 bits (526), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 167/299 (55%), Gaps = 6/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y+ K  +  +   +  N   I  HN +  +GL  Y L  N   DL P  + K    
Sbjct: 14  HKKSYQSKMEELLRYKIFTENSLLIAKHNAKYAKGLVSYKLGMNQFGDLLPHEFAKMFNG 73

Query: 77  LTHSRIRRTLVRSPESN-ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
               R  R     P +N     +P  +DWR+KG +TP  +Q  CG+C+AFS   +++GQ 
Sbjct: 74  YHGERKGRGSTFLPPANVNDSSLPKTVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQH 133

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F  + ++  LS Q ++DCS   GN GC GG + N   Y++   G+  EE YPY+     C
Sbjct: 134 FLKSGKLVSLSEQNLIDCSGSFGNEGCGGGLMDNAFKYIKANDGIDTEESYPYEAMDGDC 193

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           +FK+ ++    + +  +    E  L+  +ATVGPI+V+I+AS  +FQLY+ G+YD+  C+
Sbjct: 194 RFKKEDVGATDTGFVDIQQGSEDDLQKAVATVGPISVAIDASHSSFQLYSEGVYDEPNCS 253

Query: 256 SDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           S+ ++H +L VGY     +  W++KN W+  WGDNGY+ + R  +N+CGIA+ A Y L+
Sbjct: 254 SEELDHGVLAVGYGVKNGKKYWLVKNSWAETWGDNGYILMSRDKDNQCGIASSASYPLV 312


>gi|213623956|gb|AAI70449.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  207 bits (526), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 110/302 (36%), Positives = 167/302 (55%), Gaps = 8/302 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ Y K Y  +  + +++L W+ N K I +HN E  QGLH Y +  N L D+     ++ 
Sbjct: 32  KRTYHKQYNGQMDELQRRLIWEKNFKMITSHNFEYNQGLHTYEMAMNQLGDMTSEEVVRT 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           MT L  H R + T +          +PD +D+R+KG++TP  NQ  CG+C+AFS   A++
Sbjct: 92  MTGLKIHKRNKPTNLTFEHEKAPEKVPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALE 151

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+ K   ++  LS Q +VDC  +  N GC GG + N   YV+   G+  E+ YPY G+ 
Sbjct: 152 GQLKKKKGKLVVLSPQNLVDC--VKKNDGCGGGYMTNAFEYVRDNKGIDSEKAYPYVGED 209

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C +           +  +   +E ALK  +A VGP++V I+A   +FQ Y+ G+Y D+
Sbjct: 210 QECMYNVSGRAAACKGYKEVQEGNEKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDK 269

Query: 253 ACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYA 307
            C+++ +NHA+L VGY        WI+KN W   WGD GY+ + K   N CGIAN A Y 
Sbjct: 270 DCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEEWGDKGYILMAKDKGNACGIANLASYP 329

Query: 308 LI 309
           ++
Sbjct: 330 VM 331


>gi|111036374|dbj|BAF02516.1| cathepsin L-like proteinase [Echinococcus multilocularis]
          Length = 338

 Score =  207 bits (526), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 106/284 (37%), Positives = 159/284 (55%), Gaps = 11/284 (3%)

Query: 36  SNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRI----RRTLVRSPE 91
           +N+  +  HN+    GL  Y+   N  +DL    + ++   L  + +    +    +  E
Sbjct: 56  NNYLFVRWHNERYYLGLETYSTALNAFADLTLEEFAEKYLTLKQTPMEGIWQDMSTQYVE 115

Query: 92  SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVV 151
               +L+PD +DWR+KG +TP  +Q DCG+C+AFS   A++GQ+ + T ++  LS QQ+V
Sbjct: 116 RPTRMLVPDSIDWRKKGLVTPIKDQGDCGSCWAFSATGALEGQLKRKTGKLISLSEQQLV 175

Query: 152 DCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
           DCS  +GN GC GG + +   Y     G   E DYPY      CKF    +V  +S +  
Sbjct: 176 DCSTYTGNEGCNGGDMNDAFRY-WMRNGAESESDYPYTAMDGKCKFNSSKVVTKVSKFVK 234

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--- 268
           +P + E  LK+++A VGP++V+I+A+   F LY  GIY D  C+  Y++HA+L+VGY   
Sbjct: 235 VPKKREDQLKLSVAQVGPVSVAIDATSSGFMLYKKGIYQDNTCSQQYLDHAVLVVGYDAD 294

Query: 269 -TRNS-WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
            TR   WI+KN W   WG  GY+++ R   N CGIA  A Y LI
Sbjct: 295 KTRQKYWIVKNSWGEDWGQRGYIWMARDKGNMCGIATMASYPLI 338


>gi|33348836|gb|AAQ16118.1| cathepsin L-like cysteine proteinase B [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 335

 Score =  207 bits (526), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 166/302 (54%), Gaps = 13/302 (4%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           KDY     +  +   +  N  KI  HN++  +    Y L  N   DL    ++   TR  
Sbjct: 36  KDYASDTEEYYRLKIYMENRLKIARHNEKYAKSQVSYKLAMNEFGDLLHHEFVS--TRNG 93

Query: 79  HSRIRRTLVRS------PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
             R  R   R       PE  E + +P  +DWR+KG +TP  NQ  CG+C+AFS   +++
Sbjct: 94  FKRNYRDSPREGSFFVEPEGFEDLQLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLE 153

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           G  F+ T ++  LS Q +VDCS   GN GC GG + N   Y++   G+  E  YPY    
Sbjct: 154 GPHFRKTRKLVSLSEQNLVDCSRSFGNNGCEGGLMDNAFKYIKSNKGIDTEWSYPYNATD 213

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
            +C F R ++    + +  +P  DE+ LK  +A VGP++V+I+AS  +FQ Y+ G+YD+ 
Sbjct: 214 GVCHFNRSDVGATDTGFVDIPEGDENKLKKAVAAVGPVSVAIDASHESFQFYSEGVYDEP 273

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            C+S+ ++H +L+VGY     ++ W++KN W   WGD GY+Y+ R  +N+CGIA+ A Y 
Sbjct: 274 ECSSEQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDEGYIYMTRNKDNQCGIASSASYP 333

Query: 308 LI 309
           L+
Sbjct: 334 LV 335


>gi|392354135|ref|XP_225128.6| PREDICTED: LOW QUALITY PROTEIN: cathepsin M [Rattus norvegicus]
          Length = 333

 Score =  207 bits (526), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 114/303 (37%), Positives = 166/303 (54%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K+Y  +  + +++  W+ N K +  HN E  QG + +T++ N   D+    + K M 
Sbjct: 35  KYDKNYSLE-EEGQRRAVWEENMKVVKQHNIEYDQGKNNFTMKVNAFGDMTGEEFRKMMI 93

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +   R R+  V   +S+    +P  +DWR +G++T   NQ  C +C+AFS+A AI+GQ+
Sbjct: 94  DIPVLRFRKKKVX--QSHTGGYLPKFVDWRRRGYVTSVKNQGRCNSCWAFSVAGAIEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T  +  LS Q +VDCS   GN GC  G    T  YV   GGL  E  YPY+G++  C
Sbjct: 152 FRKTGRLVSLSAQNLVDCSRPEGNRGCISGHTFYTFKYVWNNGGLEAESTYPYEGREGHC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++        I  +S++   +E AL   +AT+GPI+V I+AS  +F  Y+ GIY +  C 
Sbjct: 212 RYLPERSAARIKGFSIISSTEE-ALMNAVATIGPISVGIDASHESFTFYSGGIYYEPKCR 270

Query: 256 SDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           +  VNHA+LLVGY         R  W++KN     WG NGYM L RG N  CGIA  A Y
Sbjct: 271 NKTVNHAVLLVGYGYEGRESDGRKYWLIKNSHGVGWGMNGYMKLARGWNKHCGIATCAFY 330

Query: 307 ALI 309
             +
Sbjct: 331 PRV 333


>gi|426219849|ref|XP_004004130.1| PREDICTED: cathepsin L1 isoform 1 [Ovis aries]
 gi|426219851|ref|XP_004004131.1| PREDICTED: cathepsin L1 isoform 2 [Ovis aries]
          Length = 334

 Score =  207 bits (526), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/291 (39%), Positives = 159/291 (54%), Gaps = 15/291 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL-THSRIRRTLVR 88
           ++  W+ N K I  HNQE  QG HG+++  N   D+    + + M       R +  L R
Sbjct: 48  RRAVWEKNKKIIDLHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKRKKGKLFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + +P  +DW +KG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLL---IDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ-SICKFKRPNIVVDIS 207
            +VDCS   GN GC GG + N   Y++  GGL  EE YPY     S C +K P       
Sbjct: 165 NLVDCSRPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPYLATDTSSCNYK-PECSAAND 223

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
           +  V  PQ E AL   +ATVGPI+V+I+A   +FQ Y SGIY D  C+S  ++H +L+VG
Sbjct: 224 TGFVDIPQREKALMKAVATVGPISVAIDAGHASFQFYKSGIYYDPDCSSKDLDHGVLVVG 283

Query: 268 Y--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y            WI+KN W   WG NGY+ + K  NN CGIA  A Y  +
Sbjct: 284 YGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|75812934|ref|NP_001028787.1| cathepsin S precursor [Bos taurus]
 gi|115503669|sp|P25326.2|CATS_BOVIN RecName: Full=Cathepsin S; Flags: Precursor
 gi|74353837|gb|AAI02246.1| Cathepsin S [Bos taurus]
 gi|296489535|tpg|DAA31648.1| TPA: cathepsin S precursor [Bos taurus]
          Length = 331

 Score =  207 bits (526), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 166/303 (54%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+     I  
Sbjct: 32  KKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+  R +    + N+   +PD +DWREKG +T    Q  CG+C+AFS   A++
Sbjct: 92  MSSLRVPSQWPRNVTYKSDPNQK--LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  E  YPYK  
Sbjct: 150 AQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAM 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N     S +  LP   E ALK  +A  GP++V I+AS  +F LY +G+Y D
Sbjct: 210 DGKCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYD 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +CT + VNH +L+VGY     ++ W++KN W  H+GD GY+ + R + N CGIANY  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|410910990|ref|XP_003968973.1| PREDICTED: cathepsin K-like [Takifugu rubripes]
          Length = 329

 Score =  207 bits (526), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 164/296 (55%), Gaps = 5/296 (1%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ K Y  +     ++  W+ N + +  HN EA  G HG+TL  NHL+D+      ++M 
Sbjct: 31  KHSKRYDNQTEMVHRRAAWEHNVRLVLRHNLEASAGKHGFTLELNHLADMTAEEVNEKMN 90

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            L           + E       P  +DWR+ G ++P  NQ  CG+C+AFS   A++GQ+
Sbjct: 91  NLKVEEWVPVRNGTFEDKLDSETPQSVDWRKHGLVSPVQNQGYCGSCWAFSSLGALEGQM 150

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
            + T  +  LS Q ++DCS   GNLGC GG +  + +Y+   GG+  E  YPY+ ++  C
Sbjct: 151 KRKTGFLVPLSPQNLLDCSTSDGNLGCRGGYISKSYSYIIRNGGVDSESFYPYEHQKGKC 210

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++         S + +LP  DE  LK T+A VGP+AV++NA   +F LY  G+Y+   C 
Sbjct: 211 RYSVKGKAGYCSRFHILPQGDEETLKATVARVGPVAVAVNAMLASFHLYRGGLYNVPNCN 270

Query: 256 SDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             ++NHA+L+VGY     ++ W++KN W   WG+ GY+ L R   N CGIA++AVY
Sbjct: 271 PKFINHAVLVVGYGSSEGQDFWLVKNSWGSAWGEEGYIRLARNKKNLCGIASFAVY 326


>gi|357627452|gb|EHJ77132.1| cathepsin L-like protease [Danaus plexippus]
          Length = 341

 Score =  206 bits (525), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 178/327 (54%), Gaps = 25/327 (7%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW    +  +K+Y  +  +K    + K++ ++ HK +  HNQ  Q+GL  Y L+ N
Sbjct: 22  LVREEWNTFKLEHKKQYDSETEEKF---RMKIYAENKHK-VAKHNQRYQKGLVSYRLKTN 77

Query: 61  HLSDLHPRHYIKEMTRLTHS------------RIRRTLVRSPESNESVLIPDHLDWREKG 108
             SD+    ++  M     +             IR     SP +   V  P  +DWR+ G
Sbjct: 78  KYSDMLHHEFVNTMNGFNKTVKHNKGLYAKGNDIRGATFVSPAN---VAAPPTVDWRQHG 134

Query: 109 FITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLR 168
            +TP  +Q  CG+C++FS   A++GQ F+ +  +  LS Q ++DCS   GN GC GG + 
Sbjct: 135 AVTPVKDQGKCGSCWSFSTTGALEGQHFRKSGFLVSLSEQNLIDCSSAYGNNGCNGGLMD 194

Query: 169 NTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVG 228
           N   Y++   G+  E+ YPY+     C++   N   +   +  +P  DEH L + LATVG
Sbjct: 195 NAFKYIKDNDGIDTEKTYPYEAVDDKCRYNPKNSGAEDVGFVDIPAGDEHKLMLALATVG 254

Query: 229 PIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHW 283
           P++V+I+AS  +FQLY+ G+Y DE C+S+ ++H +L+VGY  +      W++KN W   W
Sbjct: 255 PVSVAIDASQESFQLYSDGVYYDENCSSENLDHGVLVVGYGTDEDGGDYWLVKNSWGPSW 314

Query: 284 GDNGYMYLKRG-NNRCGIANYAVYALI 309
           GD GY+ + R  +N CGIA+ A Y L+
Sbjct: 315 GDEGYIKMARNRDNHCGIASSASYPLV 341


>gi|334332716|ref|XP_001367365.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 335

 Score =  206 bits (525), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 111/294 (37%), Positives = 163/294 (55%), Gaps = 14/294 (4%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM----TRLTHSRI 82
           DS ++  W+ N K I  HNQE + G   + L  N   D+    + + +    +  +  R 
Sbjct: 45  DSLRRAIWEKNLKMIERHNQEYRAGKQSFQLGMNKFGDMTTEEFQEAINFYNSSASQRRT 104

Query: 83  RRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
           +R L R P   +   +P+ +DWRE+G++TP  NQ  C +C+AFS   AI+GQ F+ T E+
Sbjct: 105 KRYLHREPLLAQ---LPESVDWREEGYVTPVKNQGQCLSCWAFSAVGAIEGQWFRKTGEL 161

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI 202
             LSIQ +VDC+       C GG +     YVQ  GG+  EE YPY G+ + CK++    
Sbjct: 162 VSLSIQNLVDCTTSDSISSCHGGFMDRAFQYVQDNGGIDTEECYPYVGEVNECKYQPECS 221

Query: 203 VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHA 262
             ++  +  +P  DE AL   +ATVGPI+V+I+    +F+ Y SG+Y D  C+S  +NHA
Sbjct: 222 GANVVGFVDIPSMDERALMEAVATVGPISVAIDGGNPSFKFYESGVYYDPQCSSSQLNHA 281

Query: 263 MLLVGY------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
            L+VGY       R  WI+KN W   WG+NGY+ + K  +N CGIA  A Y  +
Sbjct: 282 GLVVGYGSEGIDGRKYWIVKNSWGELWGNNGYILMAKDEDNHCGIATEASYPEV 335


>gi|74178074|dbj|BAE29827.1| unnamed protein product [Mus musculus]
 gi|74178231|dbj|BAE29900.1| unnamed protein product [Mus musculus]
 gi|74220784|dbj|BAE31361.1| unnamed protein product [Mus musculus]
          Length = 326

 Score =  206 bits (525), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 116/304 (38%), Positives = 168/304 (55%), Gaps = 11/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K+Y+ K  +  ++L W+ N K I  HN E   G+H Y +  N + D+     +  
Sbjct: 26  KKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEILCR 85

Query: 74  MTRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L   R   +T+     SN +  +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 86  MGALRIPRQSPKTVTFRSYSNRT--LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALE 143

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           GQ+   T ++  LS Q +VDCS     GN GC GG +     Y+   GG+  +  YPYK 
Sbjct: 144 GQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKA 203

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +   N     S +  LP  DE ALK  +AT GP++V I+AS  +F  Y SG+YD
Sbjct: 204 TDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD 263

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
           D +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R N N CGIA+Y  
Sbjct: 264 DPSCTGN-VNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCS 322

Query: 306 YALI 309
           Y  I
Sbjct: 323 YPEI 326


>gi|156398078|ref|XP_001638016.1| predicted protein [Nematostella vectensis]
 gi|156225133|gb|EDO45953.1| predicted protein [Nematostella vectensis]
          Length = 326

 Score =  206 bits (525), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 174/315 (55%), Gaps = 20/315 (6%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           + EW+    +  K Y   + ++     +   WQ N +KI  HN E     H Y +  NHL
Sbjct: 24  DSEWVAWKSYHGKSYSDVHEERT----RMAIWQQNLEKIKRHNAED----HSYKMAMNHL 75

Query: 63  SDLHPRH--YIKEMTRLTHSRIRRTLVR-SPESNESVLIPDHLDWREKGFITPDWNQEDC 119
            DL      Y     R  H+  +R      P SN  V IP  +DW +KG++T   NQ  C
Sbjct: 76  GDLTEDEFRYFYLGVRAHHNSTKRGWATYMPPSN--VKIPSSVDWSQKGYVTGVKNQGQC 133

Query: 120 GACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGG 179
           G+C+AFS   +++GQ F+ T  +  LS Q ++DCS   GN GC GG + N   Y++  GG
Sbjct: 134 GSCWAFSTTGSVEGQHFRKTGSLVSLSEQNLIDCSGSYGNNGCQGGLMDNAFRYIESNGG 193

Query: 180 LMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
           +  E  YPY G+Q  C F   ++   ++ +  +P   E AL+  +ATVGP++V+++AS  
Sbjct: 194 IDTESSYPYLGQQGSCHFSSSHVGARVTGYQDIPQGSEQALQSAVATVGPVSVAVDAS-- 251

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG- 294
            +Q Y+SG+YD+  C+S  ++H +L++GY     ++ W++KN W + WG  GY+ + R  
Sbjct: 252 QWQFYSSGVYDNPYCSSTQLDHGVLVIGYGNYNGQDYWLVKNSWGYSWGVEGYIMMSRNK 311

Query: 295 NNRCGIANYAVYALI 309
           NN+CGIA+ A Y L+
Sbjct: 312 NNQCGIASSASYPLV 326


>gi|3850787|emb|CAA05360.1| cathepsin S [Mus musculus]
          Length = 330

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/304 (38%), Positives = 168/304 (55%), Gaps = 11/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K+Y+ K  +  ++L W+ N K I  HN E   G+H Y +  N + D+     +  
Sbjct: 30  KKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEILCR 89

Query: 74  MTRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L   R   +T+     SN +  +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 90  MGALRIPRQSPKTVTFRSYSNRT--LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALE 147

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           GQ+   T ++  LS Q +VDCS     GN GC GG +     Y+   GG+  +  YPYK 
Sbjct: 148 GQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKA 207

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +   N     S +  LP  DE ALK  +AT GP++V I+AS  +F  Y SG+YD
Sbjct: 208 MDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD 267

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
           D +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R N N CGIA+Y  
Sbjct: 268 DPSCTGN-VNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCS 326

Query: 306 YALI 309
           Y  I
Sbjct: 327 YPEI 330


>gi|261289779|ref|XP_002611751.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
 gi|229297123|gb|EEN67761.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
          Length = 330

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/306 (36%), Positives = 175/306 (57%), Gaps = 17/306 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM- 74
           K+ K Y +K  +  ++L +Q N K I +HNQEA  G H Y L  N  +D+    Y+ ++ 
Sbjct: 30  KHDKVYSEKE-EYARRLIFQDNLKTIESHNQEADTGKHSYWLGVNQFADMTHAEYLNQVI 88

Query: 75  ------TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
                 + LT +  R T    P    ++ + D +DWR+KG +T   +Q  CG+C+AFS  
Sbjct: 89  GGCLITSNLTKTGSRATYRYMP----NMQVNDTVDWRDKGLVTDIKDQGQCGSCWAFSTT 144

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            +++GQ  K+T  +  LS Q +VDCS   GN GC GG +     Y+    G+  E+ YPY
Sbjct: 145 GSLEGQHAKATGTLVSLSEQNLVDCSRQEGNKGCEGGDMDQGFQYIIQNKGIDTEQCYPY 204

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           K K   CKF    I   +SS++ +   DE ALK   A +GPI+V I+AS  +FQ Y+SG+
Sbjct: 205 KAKNHRCKFDNSCIGATMSSFTDVTSGDEDALKQACANIGPISVGIDASHQSFQFYSSGV 264

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           Y++  C+S  ++H +L+VGY    +++ W++KN W   WG+ GY+ + R  +N+CG+A  
Sbjct: 265 YNEFECSSTKLDHGVLVVGYGTYGSKDYWLVKNSWGTVWGNEGYIMMSRNKDNQCGVATD 324

Query: 304 AVYALI 309
           A + ++
Sbjct: 325 ASFPVV 330


>gi|308322193|gb|ADO28234.1| cathepsin K [Ictalurus furcatus]
          Length = 331

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 167/300 (55%), Gaps = 11/300 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           ++K+Y     ++ ++  W+ N + I +HNQE + GLH Y L  NHL D+      +++  
Sbjct: 36  HRKEYNGLGEEAIRRSVWEKNMRLIESHNQEYELGLHTYELGMNHLGDMTTEEVAEKLLG 95

Query: 77  LTHSRIRRTL-VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           L        L    P+S +   +P  +D+R+ G++TP  NQ  CG+C+AFS   A++GQ+
Sbjct: 96  LQVPMDNDPLNTYYPDSLDK--LPKSIDYRKLGYVTPVRNQGSCGSCWAFSSVGALEGQL 153

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
            K+T ++  LS Q +VDC  ++ N GC GG + N  +YV+  GG+  EE YPY G+   C
Sbjct: 154 MKTTGKLVNLSPQNLVDC--VTENDGCGGGYMTNAFSYVRDNGGIDSEEAYPYVGQDQQC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
            + +     +   +  +    E+AL   +A VGP++V I+A   TFQ Y  G+Y D  C 
Sbjct: 212 AYNKSGKAAECRRFKEVKKGSEYALASAVAKVGPVSVGIDAMQSTFQFYKRGVYYDPNCD 271

Query: 256 SDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
            + +NHA+L VGY      +  WI+KN W   WG  GY+ + R  NN CGIAN A + ++
Sbjct: 272 KESINHAVLAVGYGATPKGKKHWIVKNSWGEEWGMKGYVLMARNRNNACGIANLASFPVM 331


>gi|296189340|ref|XP_002742739.1| PREDICTED: cathepsin L1 [Callithrix jacchus]
          Length = 333

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/290 (38%), Positives = 164/290 (56%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  QG H +T+  N   D+    + + M    + + R   V +
Sbjct: 48  RRAVWEKNMKMIELHNHEYNQGKHSFTMAMNAFGDMTNEEFRQVMNGFQNRKPRNGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P  +E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFHEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNQGCDGGLMDYAFQYVQENGGLDSEESYPYEATEESCKY-NPEYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +FQ Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKLEKALMKAVATVGPISVAIDAGHESFQFYKEGIYFEPECSSEDMDHGVLVVGY 283

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                 + NS  W++KN W   WG +GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFERTGSDNSKYWLVKNSWGEKWGMDGYIKMAKDRKNHCGIASAASYPTV 333


>gi|403300975|ref|XP_003941187.1| PREDICTED: cathepsin L1-like isoform 1 [Saimiri boliviensis
           boliviensis]
 gi|403300977|ref|XP_003941188.1| PREDICTED: cathepsin L1-like isoform 2 [Saimiri boliviensis
           boliviensis]
 gi|403300979|ref|XP_003941189.1| PREDICTED: cathepsin L1-like isoform 3 [Saimiri boliviensis
           boliviensis]
          Length = 333

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/290 (38%), Positives = 164/290 (56%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN E  QG H +T+  N   D+    + + M    + + R   V +
Sbjct: 48  RRAVWEKNMKTIELHNHEYNQGKHSFTMAMNTFGDMTNEEFRQVMNGFQNRKPRNGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P  +E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLLHEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNQGCNGGLMDYAFQYVQENGGLDSEESYPYEATEESCKY-NPKYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +FQ Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKLEKALMKAVATVGPISVAIDAGHESFQFYKEGIYFEPECSSEDMDHGVLVVGY 283

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                 + NS  W++KN W   WG +GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFERTGSDNSKYWLVKNSWGEEWGMDGYIKMAKDRKNHCGIASAASYPTV 333


>gi|73946536|ref|XP_541257.2| PREDICTED: cathepsin L1 [Canis lupus familiaris]
          Length = 333

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 106/291 (36%), Positives = 163/291 (56%), Gaps = 16/291 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N + I  HNQE  QG H +TL  N   D+    + + +      + ++  V  
Sbjct: 48  RRTVWERNMEMIEQHNQEYSQGEHSFTLAMNAFGDMTNEEFKQVLNDFKIQKHKKGKVFP 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
           +P   E   +P  +DWRE+G++TP  +Q  C  C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 APLFAE---VPSSVDWREQGYVTPVKDQGQCLGCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV+  GGL  EE YPY  +   CK++      ++++
Sbjct: 165 NLVDCSWSQGNRGCNGGLMEYAFQYVKDNGGLDSEESYPYLARNEPCKYRPEKSAANVTA 224

Query: 209 -WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
            W +L   +E  L  T+ATVGP++ ++++SP +FQ Y  GIY D  C++  +NH +L+VG
Sbjct: 225 FWPIL--NEEDGLMTTVATVGPVSAAVDSSPQSFQFYKKGIYYDPKCSNKLLNHGVLVVG 282

Query: 268 Y--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y         +  WI+KN W  +WG  GYM L K  +N CGIA  A Y ++
Sbjct: 283 YGFEGAESDNKKYWIVKNSWGTNWGMQGYMLLAKDRDNHCGIATRASYPVV 333


>gi|391338876|ref|XP_003743781.1| PREDICTED: cathepsin L-like isoform 4 [Metaseiulus occidentalis]
          Length = 336

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 173/316 (54%), Gaps = 13/316 (4%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + + EW    +   KKY+    +     +KK+  Q+ H  I  HN +  +G   Y L+ N
Sbjct: 27  LFDAEWQNFKVHHNKKYEGSTVEAF---RKKIFLQNTHL-IARHNIKHAKGETTYKLKMN 82

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSP-ESNESVLIPDHLDWREKGFITPDWNQEDC 119
              D+    ++  M  L   R  RT   S     ESV +P  +DWREKG +TP  NQ  C
Sbjct: 83  QFGDMLHHEFVSTMNGLL--RSNRTYFGSTWIEPESVSLPKSVDWREKGAVTPVKNQGHC 140

Query: 120 GACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGG 179
           G+C++FS   A++GQ+F+ T E+  LS Q ++DCS   GN GC GG + N   Y++   G
Sbjct: 141 GSCWSFSTTGALEGQLFRKTGELVSLSEQNLIDCSTSYGNNGCGGGLMDNAFTYIKENHG 200

Query: 180 LMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
           +  EE YPY+GKQ  C++ + +     + +  +P  +E AL   LAT+GP++V+I+AS  
Sbjct: 201 IDTEESYPYEGKQGKCRYHKEDSAGRDTGFVDIPSGNERALAKALATIGPVSVAIDASHE 260

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG 294
           +FQ Y  G+Y+   C S  ++H +L VGY      ++ +I+KN W   WG  GY+ + R 
Sbjct: 261 SFQFYHEGVYNPPDCDSHSLDHGVLAVGYGTTDDGQDYYIIKNSWGERWGQEGYVLMARN 320

Query: 295 N-NRCGIANYAVYALI 309
           + N CG+A  A Y L+
Sbjct: 321 SKNECGVATQASYPLV 336


>gi|449513868|ref|XP_002191976.2| PREDICTED: cathepsin L1-like [Taeniopygia guttata]
          Length = 443

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/304 (36%), Positives = 165/304 (54%), Gaps = 12/304 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           ++KDY ++  +  +++ W+ N K I  HN +   G H Y L  N   D+    + + M  
Sbjct: 141 HRKDYHER-EEGWRRVVWEKNLKMIEIHNLDHALGKHSYKLGMNQFGDMTTEEFRQLMNG 199

Query: 77  LTHSRIRRTLVRSPESNESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
             H +  R    S     + L  P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ 
Sbjct: 200 YVHKKSERKYRGSQFLEPNFLEAPRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQH 259

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK-QSI 194
           F+ T ++  LS Q +VDCS   GN GC GG +     YVQ  GG+  EE YPY  K    
Sbjct: 260 FRKTGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDED 319

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C++K      + + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY +  C
Sbjct: 320 CRYKAEYNAANDTGFVDIPQGHERALMKAVAAVGPVSVAIDAGHSSFQFYQSGIYYEPDC 379

Query: 255 TSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAV 305
           +S+ ++H +L+VGY         +  WI+KN W   WGD GY+Y+ K   N CGIA  A 
Sbjct: 380 SSEDLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAAS 439

Query: 306 YALI 309
           Y L+
Sbjct: 440 YPLV 443


>gi|390608645|ref|NP_001254624.1| cathepsin S isoform 1 preproprotein [Mus musculus]
 gi|74214026|dbj|BAE29430.1| unnamed protein product [Mus musculus]
          Length = 343

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/304 (38%), Positives = 168/304 (55%), Gaps = 11/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K+Y+ K  +  ++L W+ N K I  HN E   G+H Y +  N + D+     +  
Sbjct: 43  KKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEILCR 102

Query: 74  MTRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L   R   +T+     SN +  +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 103 MGALRIPRQSPKTVTFRSYSNRT--LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALE 160

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           GQ+   T ++  LS Q +VDCS     GN GC GG +     Y+   GG+  +  YPYK 
Sbjct: 161 GQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKA 220

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +   N     S +  LP  DE ALK  +AT GP++V I+AS  +F  Y SG+YD
Sbjct: 221 TDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD 280

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
           D +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R N N CGIA+Y  
Sbjct: 281 DPSCTGN-VNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCS 339

Query: 306 YALI 309
           Y  I
Sbjct: 340 YPEI 343


>gi|2961621|gb|AAC05781.1| cathepsin S [Mus musculus]
          Length = 340

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/304 (38%), Positives = 168/304 (55%), Gaps = 11/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K+Y+ K  +  ++L W+ N K I  HN E   G+H Y +  N + D+        
Sbjct: 40  KKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISCR 99

Query: 74  MTRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L  SR   +T+     SN +  +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 100 MGALRISRQSPKTVTFRSYSNRT--LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALE 157

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           GQ+   T ++  LS Q +VDCS     GN GC GG +     Y+   GG+  +  YPYK 
Sbjct: 158 GQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKA 217

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +   N     S +  LP  DE ALK  +AT GP++V I+AS  +F  Y SG+YD
Sbjct: 218 TDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD 277

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
           D +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R N N CGIA+Y  
Sbjct: 278 DPSCTGN-VNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCS 336

Query: 306 YALI 309
           Y  I
Sbjct: 337 YPEI 340


>gi|291224872|ref|XP_002732426.1| PREDICTED: cathepsin L2-like [Saccoglossus kowalevskii]
          Length = 691

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 164/292 (56%), Gaps = 13/292 (4%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSR---IR 83
           D  +++ W  N K +  HN + ++G   YT+  N   D+  + +   M      +    R
Sbjct: 404 DGVRQMIWSQNKKNVELHNMKYRKGESSYTMEMNQFGDMTNKEFTDMMCGYKGKKQNSPR 463

Query: 84  RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIE 143
            +   +P + ++   PD +DWR KG++T   +Q  CG+C+AFS   +++GQ FK+T ++ 
Sbjct: 464 SSTFLAPSNYKA---PDSVDWRTKGYVTEVKDQGACGSCWAFSTTGSMEGQSFKNTGKLV 520

Query: 144 ELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIV 203
             S QQ+VDCS   GN+GC GG +     Y++   G+  E DYPY  K   C +     V
Sbjct: 521 SFSEQQLVDCSGSYGNMGCGGGLMDQAFAYIE-DYGIEPEADYPYTAKDDPCSYDTSKAV 579

Query: 204 VDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAM 263
              + ++ +   DE AL+  +ATVGPI+V+I+AS  +F+LY SG+YD+ AC+   ++H +
Sbjct: 580 ATNTGYTDIATMDEKALQQAVATVGPISVAIDASHSSFRLYKSGVYDEPACSQTMLDHGV 639

Query: 264 LLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
           L VGY         WI+KN W   WG+ GY+++ R N N+CGIA  A Y L+
Sbjct: 640 LAVGYGTTDDGNDYWIVKNSWGSTWGNQGYIHMSRNNDNQCGIATNASYPLM 691


>gi|391338870|ref|XP_003743778.1| PREDICTED: cathepsin L-like isoform 1 [Metaseiulus occidentalis]
 gi|391338872|ref|XP_003743779.1| PREDICTED: cathepsin L-like isoform 2 [Metaseiulus occidentalis]
 gi|391338874|ref|XP_003743780.1| PREDICTED: cathepsin L-like isoform 3 [Metaseiulus occidentalis]
          Length = 331

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 173/316 (54%), Gaps = 13/316 (4%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + + EW    +   KKY+    +     +KK+  Q+ H  I  HN +  +G   Y L+ N
Sbjct: 22  LFDAEWQNFKVHHNKKYEGSTVEAF---RKKIFLQNTHL-IARHNIKHAKGETTYKLKMN 77

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSP-ESNESVLIPDHLDWREKGFITPDWNQEDC 119
              D+    ++  M  L   R  RT   S     ESV +P  +DWREKG +TP  NQ  C
Sbjct: 78  QFGDMLHHEFVSTMNGLL--RSNRTYFGSTWIEPESVSLPKSVDWREKGAVTPVKNQGHC 135

Query: 120 GACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGG 179
           G+C++FS   A++GQ+F+ T E+  LS Q ++DCS   GN GC GG + N   Y++   G
Sbjct: 136 GSCWSFSTTGALEGQLFRKTGELVSLSEQNLIDCSTSYGNNGCGGGLMDNAFTYIKENHG 195

Query: 180 LMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
           +  EE YPY+GKQ  C++ + +     + +  +P  +E AL   LAT+GP++V+I+AS  
Sbjct: 196 IDTEESYPYEGKQGKCRYHKEDSAGRDTGFVDIPSGNERALAKALATIGPVSVAIDASHE 255

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG 294
           +FQ Y  G+Y+   C S  ++H +L VGY      ++ +I+KN W   WG  GY+ + R 
Sbjct: 256 SFQFYHEGVYNPPDCDSHSLDHGVLAVGYGTTDDGQDYYIIKNSWGERWGQEGYVLMARN 315

Query: 295 N-NRCGIANYAVYALI 309
           + N CG+A  A Y L+
Sbjct: 316 SKNECGVATQASYPLV 331


>gi|392306967|ref|NP_067256.3| cathepsin S isoform 2 preproprotein [Mus musculus]
 gi|26390492|dbj|BAC25906.1| unnamed protein product [Mus musculus]
 gi|148706872|gb|EDL38819.1| cathepsin S [Mus musculus]
          Length = 342

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/304 (38%), Positives = 168/304 (55%), Gaps = 11/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K+Y+ K  +  ++L W+ N K I  HN E   G+H Y +  N + D+     +  
Sbjct: 42  KKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEILCR 101

Query: 74  MTRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L   R   +T+     SN +  +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 102 MGALRIPRQSPKTVTFRSYSNRT--LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALE 159

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           GQ+   T ++  LS Q +VDCS     GN GC GG +     Y+   GG+  +  YPYK 
Sbjct: 160 GQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKA 219

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +   N     S +  LP  DE ALK  +AT GP++V I+AS  +F  Y SG+YD
Sbjct: 220 TDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD 279

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
           D +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R N N CGIA+Y  
Sbjct: 280 DPSCTGN-VNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCS 338

Query: 306 YALI 309
           Y  I
Sbjct: 339 YPEI 342


>gi|395740610|ref|XP_002819972.2| PREDICTED: cathepsin L1 [Pongo abelii]
          Length = 333

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 162/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY-NPKYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|341940310|sp|O70370.2|CATS_MOUSE RecName: Full=Cathepsin S; Flags: Precursor
          Length = 340

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/304 (38%), Positives = 168/304 (55%), Gaps = 11/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K+Y+ K  +  ++L W+ N K I  HN E   G+H Y +  N + D+     +  
Sbjct: 40  KKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEILCR 99

Query: 74  MTRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L   R   +T+     SN +  +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 100 MGALRIPRQSPKTVTFRSYSNRT--LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALE 157

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           GQ+   T ++  LS Q +VDCS     GN GC GG +     Y+   GG+  +  YPYK 
Sbjct: 158 GQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKA 217

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +   N     S +  LP  DE ALK  +AT GP++V I+AS  +F  Y SG+YD
Sbjct: 218 TDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD 277

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
           D +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R N N CGIA+Y  
Sbjct: 278 DPSCTGN-VNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCS 336

Query: 306 YALI 309
           Y  I
Sbjct: 337 YPEI 340


>gi|188501707|gb|ACD54818.1| cathepsin L precursor-like protein [Adineta vaga]
          Length = 331

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 106/281 (37%), Positives = 166/281 (59%), Gaps = 13/281 (4%)

Query: 37  NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHS---RIRRTLVRSPESN 93
           N   I+ HN E   GLH YTL  N   D+    + K+M     S    I   +  +PE+ 
Sbjct: 56  NVAMINKHNLEVDLGLHSYTLAMNQFGDMTNEEFRKQMNGYQMSSEDEINSQIFSAPEN- 114

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
              ++P+ +DWR KG++T   +Q  CG+C+AFS   A++GQ F  TS++  LS Q +VDC
Sbjct: 115 --FVLPNDVDWRTKGYVTYVKDQGQCGSCWAFSTTGALEGQHFAKTSQLIPLSEQNLVDC 172

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S++  N GC GG+     +Y++   G+  EE YPY  ++ IC+F + +I   I+  + + 
Sbjct: 173 SLL--NFGCNGGNQDLAYDYIKMHHGISSEESYPYWAERDICQFNKIHIAATITGHARIK 230

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----T 269
             +E  L+  +AT+GPIAVSI+A   +FQ Y+SG+YD+  C++  ++HA+L VGY    +
Sbjct: 231 KHNETDLQAAIATIGPIAVSIDAGQGSFQFYSSGVYDEPNCSTKRLDHAVLAVGYGTLNS 290

Query: 270 RNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           ++ +I+KN W   WG  GY+ + R   N+CGIA  A+Y L+
Sbjct: 291 KDYYIVKNSWGSSWGIRGYILMSRNKQNQCGIATSALYPLV 331


>gi|395514298|ref|XP_003761356.1| PREDICTED: cathepsin L1-like [Sarcophilus harrisii]
          Length = 365

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 176/335 (52%), Gaps = 41/335 (12%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++++DY +   +  ++  W+ N + I  HN E   G H + +  N   D+    + + 
Sbjct: 33  KAQHRRDYGE--NEDWRRAIWEKNLRSIEMHNLEYSAGKHSFQMEMNKFGDMTNEEFRQV 90

Query: 74  MTRLTHSRIRR----------TLVRSPES---------------------NESVL--IPD 100
           M   +  R++R           LV+ P+S                      E +L  IP 
Sbjct: 91  MNGFSTHRVQRRTKGRLFREPLLVQIPKSVDWRDKGYVTPVKNQLVRRLFREPLLVQIPK 150

Query: 101 HLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNL 160
            +DWR+KG++TP  NQ  CG+C+AFS   +++GQ F+ T ++  LS Q +VDCS   GN 
Sbjct: 151 SVDWRDKGYVTPVKNQGQCGSCWAFSATGSLEGQWFRKTGKLVSLSEQNLVDCSTAQGNS 210

Query: 161 GCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHAL 220
           GC GG + N   YV+  GG+  EE YPY      C++K      +I+ +  +P + E AL
Sbjct: 211 GCQGGLMDNAFEYVKENGGIDTEESYPYIAADDTCQYKPQYSGANITGYVDIPSRMEKAL 270

Query: 221 KVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WIL 275
           +  +ATVGPI+V+I+A   +FQ Y SG+Y +  C+S+ ++H +L VGY         WI+
Sbjct: 271 EKAVATVGPISVAIDAGHSSFQFYRSGVYYEPECSSEDLDHGVLAVGYGVQGKNGKYWIV 330

Query: 276 KNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           KN W   WGD+GY+ + R  NN CGIA  A Y  +
Sbjct: 331 KNSWGEEWGDSGYILMARDRNNHCGIATAASYPEV 365


>gi|2746723|gb|AAB94925.1| cathepsin S precursor [Mus musculus]
          Length = 340

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/304 (38%), Positives = 168/304 (55%), Gaps = 11/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K+Y+ K  +  ++L W+ N K I  HN E   G+H Y +  N + D+        
Sbjct: 40  KKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISCR 99

Query: 74  MTRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L  SR   +T+     SN +  +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 100 MGALRISRQSPKTVTFRSYSNRT--LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALE 157

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           GQ+   T ++  LS Q +VDCS     GN GC GG +     Y+   GG+  +  YPYK 
Sbjct: 158 GQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKA 217

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +   N     S +  LP  DE ALK  +AT GP++V I+AS  +F  Y SG+YD
Sbjct: 218 MDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD 277

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
           D +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R N N CGIA+Y  
Sbjct: 278 DPSCTGN-VNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCS 336

Query: 306 YALI 309
           Y  I
Sbjct: 337 YPEI 340


>gi|115715524|ref|XP_780580.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 334

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 167/304 (54%), Gaps = 9/304 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K Y     ++ ++L WQ N   +  HN +   G   Y L  N  +DL    ++  
Sbjct: 32  KNEHGKRYLSDEEEASRRLIWQKNLDIVIKHNLKYDLGHFTYDLGMNQFADLKNEEFVSL 91

Query: 74  MT--RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           M   R   S+  R     P SN    +P  +DWR KG++TP  NQ  CG+C+AFS   ++
Sbjct: 92  MNGFRGNSSKATRGSTFLPPSN-VFDMPTMVDWRTKGYVTPVKNQLQCGSCWAFSATGSL 150

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ FK T ++  LS Q +VDCS   GN+GC GG +     Y+   GG+  E  YPY   
Sbjct: 151 EGQHFKKTGKLVSLSEQNLVDCSGKEGNMGCEGGLMDQAFQYILDVGGIDTEMSYPYTAM 210

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C F + NI    + ++ +    E AL++ +A+VGPI+V+I+AS  +FQLY SG+Y++
Sbjct: 211 DGQCHFNKANIGATDTGYTDVTTGSESALQMAVASVGPISVAIDASHQSFQLYKSGVYNE 270

Query: 252 EACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
            AC+S  ++H +L VGY  +S     +   + W   WG NGY+++ R  +N+CGIA  A 
Sbjct: 271 PACSSTLLDHGVLAVGYGTSSDGTDYFFFFHSWGAAWGMNGYLWMSRNKDNQCGIATKAS 330

Query: 306 YALI 309
           Y L+
Sbjct: 331 YPLV 334


>gi|354473025|ref|XP_003498737.1| PREDICTED: cathepsin S-like [Cricetulus griseus]
          Length = 341

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/305 (37%), Positives = 170/305 (55%), Gaps = 13/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K Y++K  +  ++L W+ N K +  HN E    +H Y+L  NH+ D+     + +
Sbjct: 41  KKFHGKQYKEKNEEEARRLIWEKNLKLVMLHNLEYSLEMHSYSLGMNHMGDMTSEEVLGQ 100

Query: 74  M--TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           M   R+   R R +  +S   N +  +PD +DWREKG +T    Q  CG+C+AFS   A+
Sbjct: 101 MRPLRVPSQRHRNSTYKS---NPNQKLPDSMDWREKGCVTEVKYQGSCGSCWAFSAVGAL 157

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           + Q+   T ++  LS Q +VDCS     GN GC GG +     Y+   GG+  +  YPYK
Sbjct: 158 EAQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCDGGFMTRAFQYIIDNGGIDSDASYPYK 217

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
                C +   +     S +  LP  DE ALK  +A  GP++V I+AS  +F LY SG+Y
Sbjct: 218 AVAEKCHYDSKSRAATCSRYMELPSGDEEALKEAVANKGPVSVGIDASHPSFFLYKSGVY 277

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYA 304
           D+ +CT + VNH +L+VGY     ++ W++KN W  H+GD GY+ + R N N+CGIA+Y 
Sbjct: 278 DEPSCTEN-VNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNNKNQCGIASYG 336

Query: 305 VYALI 309
            Y  I
Sbjct: 337 SYPEI 341


>gi|410990008|ref|XP_004001242.1| PREDICTED: cathepsin L1 isoform 1 [Felis catus]
          Length = 333

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/291 (37%), Positives = 167/291 (57%), Gaps = 16/291 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL-THSRIRRTLVR 88
           ++  W+ N K I  HN+E  QG H +T+  N   D+    + + M  L    R +  + +
Sbjct: 48  RRAVWERNMKMIEQHNREHSQGKHTFTMAMNAFGDMTNEEFRQVMNGLKIQKRKKWKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
           +P   E   IP  +DWREKG++TP  +Q  C  C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 APFFVE---IPSSVDWREKGYVTPVKDQGYCLCCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN G +GG + +   YV+  GGL  EE YPY  +   CK++  N V +++ 
Sbjct: 165 NLVDCSQTEGNEGYSGGLIDDAFQYVKDNGGLDSEESYPYHAQGDSCKYRPENSVANVTD 224

Query: 209 -WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
            W +  P  E+ L +TLA VGPI+ +I+AS  TF+ Y  GIY D +C+S+ V+H +L+VG
Sbjct: 225 YWDI--PSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVG 282

Query: 268 Y--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y         +  WI+KN W   WG +GY+ + K  +N CGIA+ A +  +
Sbjct: 283 YGADGTETENKKYWIIKNSWGTDWGMDGYIKMAKDRDNHCGIASLASFPTV 333


>gi|109112057|ref|XP_001086247.1| PREDICTED: cathepsin L1-like isoform 5 [Macaca mulatta]
 gi|402897797|ref|XP_003911929.1| PREDICTED: cathepsin L1 [Papio anubis]
          Length = 333

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 160/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE  QG H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV   GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKY-NPEYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|410303012|gb|JAA30106.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|4503155|ref|NP_001903.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|22202619|ref|NP_666023.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|384081592|ref|NP_001244900.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|384081594|ref|NP_001244901.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|332832229|ref|XP_003312197.1| PREDICTED: cathepsin L1 isoform 2 [Pan troglodytes]
 gi|332832233|ref|XP_001137800.2| PREDICTED: cathepsin L1 isoform 1 [Pan troglodytes]
 gi|397470218|ref|XP_003806728.1| PREDICTED: cathepsin L1 isoform 1 [Pan paniscus]
 gi|397470220|ref|XP_003806729.1| PREDICTED: cathepsin L1 isoform 2 [Pan paniscus]
 gi|397470222|ref|XP_003806730.1| PREDICTED: cathepsin L1 isoform 3 [Pan paniscus]
 gi|410042824|ref|XP_003951515.1| PREDICTED: cathepsin L1 [Pan troglodytes]
 gi|115741|sp|P07711.2|CATL1_HUMAN RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Cathepsin L1 heavy
           chain; Contains: RecName: Full=Cathepsin L1 light chain;
           Flags: Precursor
 gi|29715|emb|CAA30981.1| pro-(cathepsin L) [Homo sapiens]
 gi|190418|gb|AAA66974.1| preprocathepsin L precursor [Homo sapiens]
 gi|31873292|emb|CAD97637.1| hypothetical protein [Homo sapiens]
 gi|48146223|emb|CAG33334.1| CTSL [Homo sapiens]
 gi|119583135|gb|EAW62731.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583136|gb|EAW62732.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583137|gb|EAW62733.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583138|gb|EAW62734.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583140|gb|EAW62736.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|208965934|dbj|BAG72981.1| cathepsin L1 [synthetic construct]
 gi|410303006|gb|JAA30103.1| cathepsin L1 [Pan troglodytes]
 gi|410303008|gb|JAA30104.1| cathepsin L1 [Pan troglodytes]
 gi|410303010|gb|JAA30105.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|60827856|gb|AAX36816.1| cathepsin L [synthetic construct]
          Length = 334

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|75067394|sp|Q9GKL8.1|CATL1_CERAE RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Cathepsin L1 heavy
           chain; Contains: RecName: Full=Cathepsin L1 light chain;
           Flags: Precursor
 gi|11493685|gb|AAG35605.1|AF201700_1 cysteine protease [Chlorocebus aethiops]
          Length = 333

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 160/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE  QG H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV   GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKY-NPEYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|47169476|tpe|CAE48375.1| TPA: cathepsin Q-like 2 [Rattus norvegicus]
          Length = 342

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/313 (38%), Positives = 174/313 (55%), Gaps = 24/313 (7%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY+K Y  +  +  K++ W+ N KKI  HN+E   G + Y +  N+ +DL    +   +T
Sbjct: 35  KYEKLYSPE-EELLKRVVWEENVKKIELHNRENSLGKNTYIMEINNFADLTDEEFKDMIT 93

Query: 76  RLT-------HSRIRRTLVRSPESNE---SVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
            +T        S  +R L  SP  N       +P  +DWR++G++T    Q  C +C+AF
Sbjct: 94  GITLPINNTMKSLWKRAL-GSPFPNSWYWRDALPKSIDWRKEGYVTRVREQGKCKSCWAF 152

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
            +A AI+GQ+FK T ++  LS+Q +VDCS   GN GC GG+  N   YV   GGL  E  
Sbjct: 153 PVAGAIEGQMFKKTGKLTPLSVQNLVDCSKPQGNKGCRGGTTYNAFQYVLQNGGLESEAT 212

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPYKGK+ +CK+   N    I+ +  L P+DE  L   LAT GP+A  I+AS  +F  + 
Sbjct: 213 YPYKGKEGLCKYNPKNAYAKITRFVAL-PEDEDVLMDALATKGPVAAGIHASHGSFH-FV 270

Query: 246 SGIYDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNN 296
           SGIY +  C ++ VNHA+L+VGY          N W++KN W   WG  GYM + K  NN
Sbjct: 271 SGIYHEPKC-NNRVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKQWGLKGYMKIAKDRNN 329

Query: 297 RCGIANYAVYALI 309
            CGIA +A Y ++
Sbjct: 330 HCGIATFAQYPIV 342


>gi|346574377|gb|AEO36960.1| silicatein-alpha 3 [Baikalospongia fungiformis]
          Length = 324

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 168/298 (56%), Gaps = 9/298 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +++ Y  +  + ++   W +N K I  HN  A   L GYTL  N   DL    + +    
Sbjct: 31  HQRSYESQLQEMERHSIWIANKKYIEHHNANAD--LFGYTLAMNGFGDLTSAEFTERF-- 86

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           LTH   +R+ +++ ES + V   D LDWR +G +T   +Q  CG+ YAF+ A A++G   
Sbjct: 87  LTHKHSQRSGLQTFESPKGVTYADSLDWRTRGVVTSVQSQGQCGSSYAFAAAGALEGATA 146

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
            +  ++  LS Q ++DCS+  GN GC+GG +     YV   GG+  E  YPYKGKQS C+
Sbjct: 147 LAADKLVALSEQNIIDCSVPYGNHGCSGGDVYTAFKYVVDNGGIDTESSYPYKGKQSSCQ 206

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +   N+    +    +    E  L   +A+VGPIAV+++AS + F  Y SG++D   C++
Sbjct: 207 YNSKNVGAISTGVVKIASGSETDLLSAVASVGPIAVAVDASVNAFMFYQSGVFDSSTCST 266

Query: 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
             +NHAML+ GY     ++ W++KN W   WG++GY+ + R   N+CGIA+ A+Y ++
Sbjct: 267 SKLNHAMLVTGYGSTNGKDYWLVKNSWGTGWGESGYIKMVRNKYNQCGIASDALYPML 324


>gi|380790141|gb|AFE66946.1| cathepsin L1 preproprotein [Macaca mulatta]
 gi|384939708|gb|AFI33459.1| cathepsin L1 preproprotein [Macaca mulatta]
          Length = 333

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 160/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE  QG H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQLMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV   GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKY-NPEYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|28194645|gb|AAO33584.1|AF479266_1 cathepsin P [Mesocricetus auratus]
          Length = 286

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/288 (37%), Positives = 158/288 (54%), Gaps = 12/288 (4%)

Query: 31  KLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSP 90
           +L W+ N K +  HN E  QG HG+T+  N   D+    Y   MT +       T V+S 
Sbjct: 1   RLVWEENMKMVKMHNGEDAQGRHGFTMEMNAFGDMTAEEYRSMMTDIPVPAA--TKVKSE 58

Query: 91  ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQV 150
            +     +P   DW +KGF+TP   Q  CG+C+AF+   AI+GQ+F  T  +  LS+Q +
Sbjct: 59  PNTLLDDLPKSEDWTKKGFVTPVRKQGPCGSCWAFAATGAIEGQMFWKTGNLTTLSVQNL 118

Query: 151 VDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWS 210
           VDCS   GN GC  G+      YV   GGL  EE YPY+ K+  C++   N    I+ + 
Sbjct: 119 VDCSKPQGNNGCMQGNAYRAYKYVLHNGGLEAEETYPYEAKEGPCRYNPENSRAYITEFV 178

Query: 211 VLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-- 268
            LP  +++ L V +AT+GP++ +++AS  +F+ Y  GIY +  C+S   NHA+L+VGY  
Sbjct: 179 TLPANEDY-LMVAVATIGPVSAAVDASHDSFRFYNGGIYHEPNCSSYVTNHAVLVVGYGF 237

Query: 269 ------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   N W++KN W   WG NGYM + K  NN C IA++A +  I
Sbjct: 238 EGNETDGNNYWLIKNSWGEGWGINGYMKIAKDRNNHCAIASFASFPNI 285


>gi|410256886|gb|JAA16410.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNNKYWLVKNSWGGEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|339765072|gb|AEK01110.1| cathepsin L [Cristaria plicata]
 gi|397880684|gb|AFO67888.1| cathepsin L [Cristaria plicata]
          Length = 333

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 107/282 (37%), Positives = 159/282 (56%), Gaps = 7/282 (2%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR-LTHSRIRRTLVRSPES 92
           W+ N   I+ HN +A QG+H Y L  N   DL    Y +  T  + +  I R+      +
Sbjct: 53  WKENVLAINRHNSKADQGVHTYWLSMNEYGDLTNEEYFRLRTGFIMNGNIERSGSIFKYT 112

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
           N S   P  +DWR KG++T   +Q  CG+CYAFS   A++GQ F+ T ++  LS Q +VD
Sbjct: 113 NLSEY-PRQVDWRRKGYVTRVKDQGGCGSCYAFSATGALEGQHFRKTGKLVSLSEQNIVD 171

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +  +  Y++   G+ KEE YPY+ +   C+F+R  +      +  L
Sbjct: 172 CSFKEGNKGCKGGLMDKSFTYIKNNNGIDKEEAYPYEARDGPCRFRRSEVGATDRGYVDL 231

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-TRN 271
           P  DE AL+  +AT+GPI+V+I+     F+ Y  G++D+  C+   +NH +L+VGY TRN
Sbjct: 232 PENDETALRHAVATIGPISVAIDGHHFNFRFYDHGVFDNPNCSKTKINHGVLVVGYGTRN 291

Query: 272 S---WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
               W++KN W   WG  GY+ + R N N+C IA  A Y ++
Sbjct: 292 GLDYWMVKNSWGRGWGAKGYILMSRNNDNQCCIACAASYPIV 333


>gi|293342579|ref|XP_001065885.2| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|293354415|ref|XP_225137.5| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|149039747|gb|EDL93863.1| rCG24278 [Rattus norvegicus]
          Length = 330

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 171/303 (56%), Gaps = 12/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y     + +K+  W++N K I+ HN++  +G HG++L  N   DL    + + 
Sbjct: 33  KTKHGKTYNTNE-EGQKRAVWENNMKMINLHNEDYLKGKHGFSLEMNAFGDLTNTEFREL 91

Query: 74  MTRLTHSRIRRTLV-RSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           MT       + T + R P   +   IP  LDWRE G++TP  NQ  CG+C+AFS   +++
Sbjct: 92  MTGFQSMGPKETTIFREPFLGD---IPKSLDWREHGYVTPVKNQGQCGSCWAFSAVGSLE 148

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQIFK T ++  LS Q +VDCS   GNLGC GG +     YV+   GL   E Y Y+ + 
Sbjct: 149 GQIFKKTGKLVSLSEQNLVDCSWSYGNLGCNGGLMEFAFQYVKENRGLDTGESYAYEAQD 208

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
            +C++       +++ + V  P  E  L   +A+VGP++V I++   +F+ Y+ G+Y + 
Sbjct: 209 GLCRYNPKYSAANVTGF-VKVPLSEDDLMSAVASVGPVSVGIDSHHQSFRFYSGGMYYEP 267

Query: 253 ACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
            C+S  ++HA+L+VGY   S     W++KN W   WG +GY+ + K  NN CGIA YA+Y
Sbjct: 268 DCSSTEMDHAVLVVGYGEESDGGKYWLVKNSWGEDWGMDGYIKMAKDQNNNCGIATYAIY 327

Query: 307 ALI 309
             +
Sbjct: 328 PTV 330


>gi|148745204|gb|AAI42984.1| Cathepsin L1 [Homo sapiens]
          Length = 333

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGPCGSCWAFSATGALEGQMFRKTGRLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|440906716|gb|ELR56945.1| Cathepsin S, partial [Bos grunniens mutus]
          Length = 342

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/303 (37%), Positives = 166/303 (54%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+     I  
Sbjct: 43  KKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISL 102

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+  R +    + N+   +PD +DWREKG +T    Q  CG+C+AFS   A++
Sbjct: 103 MSSLRVPSQWPRNVTYKSDPNQK--LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALE 160

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  E  YPYK  
Sbjct: 161 AQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAM 220

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N     S +  LP   E ALK  +A  GP++V I+AS  +F LY +G+Y D
Sbjct: 221 DGKCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYD 280

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +CT + VNH +L+VGY     ++ W++KN W  H+GD GY+ + R + N CGIA+Y  Y
Sbjct: 281 PSCTQN-VNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIASYPSY 339

Query: 307 ALI 309
             I
Sbjct: 340 PEI 342


>gi|355567871|gb|EHH24212.1| Cathepsin L1 [Macaca mulatta]
          Length = 333

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 160/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE  QG H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV   GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEEAYPYEATEESCKY-NPEYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|390337645|ref|XP_001199228.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 172/315 (54%), Gaps = 19/315 (6%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           KEW       + ++ K Y     ++ ++L WQ N   +  HN +   G   Y L  N  +
Sbjct: 29  KEW-------KNEHGKRYLSDEEEASRRLIWQKNLDIVIRHNLKYDLGHFTYDLGMNQFA 81

Query: 64  DLHPRHYIKEMTRL---THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCG 120
           DL  + ++  MT       S+  +     P +N   L P  +DWR KG++TP  +Q  CG
Sbjct: 82  DLQNKEFVAMMTGFRVNGTSKAAKGSTFLPPNNVGKL-PKTVDWRTKGYVTPVKDQGQCG 140

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+AFS   +++GQ FK T ++  LS Q +VDCS    N GC GG +     Y+  AGG+
Sbjct: 141 SCWAFSATGSLEGQHFKKTGKLVSLSEQNLVDCS--DKNYGCNGGLMDRAFQYIIDAGGI 198

Query: 181 MKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
             EE YPY      C FK  N+   ++ ++ +    E AL+  +A +GPI+V+I+AS  +
Sbjct: 199 DTEESYPYIAMDGNCHFKTANVGATVTGYTDVTSGSEKALQKAVAHIGPISVAIDASHFS 258

Query: 241 FQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG- 294
           FQLY SG+Y++  C+S  ++H +L VGY       + WI+KN W+  WG NGY+++ R  
Sbjct: 259 FQLYQSGVYNEPGCSSTLLDHGVLAVGYGTTIDGTDYWIVKNSWAETWGMNGYIWMSRNK 318

Query: 295 NNRCGIANYAVYALI 309
           +N+CGIA  A Y L+
Sbjct: 319 DNQCGIATQASYPLV 333


>gi|417399134|gb|JAA46597.1| Putative cathepsin l1 [Desmodus rotundus]
          Length = 335

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 166/308 (53%), Gaps = 17/308 (5%)

Query: 16  KYKKDYRK---KATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK 72
           ++K  YR+      +  ++  W+ N K I  HN+E  Q  HG+T+  N   D+    + +
Sbjct: 31  QWKATYRRLYGADEEGWRRAVWEKNRKMIELHNREYSQRKHGFTMAMNAFGDMTNEEFRQ 90

Query: 73  EMTRLTHSRIRRT--LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
            M      +  R   L R P   E   IP  +DWR+KG++TP  NQ  CG+C+AFS   A
Sbjct: 91  VMNGFLKQKQHRNGRLFREPLFAE---IPSSVDWRQKGYVTPVKNQGQCGSCWAFSANGA 147

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+F+ T ++  LS Q +VDCS   GN GC GG + N   YV+   GL  EE YPY G
Sbjct: 148 LEGQMFRKTGKLVSLSEQNLVDCSHSQGNQGCNGGLMDNAFQYVKDNKGLDSEESYPYLG 207

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           ++S     RP       +  V  PQ E  L   +ATVGPI+V+I+A   +FQ Y+ GIY 
Sbjct: 208 RESNTCNYRPEYSAANDTGFVDIPQHERGLMKAVATVGPISVAIDAGHSSFQFYSEGIYY 267

Query: 251 DEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           +  C+S  ++H +L+VGY        +   WI+KN W   WG +GY+ + R  +N CGIA
Sbjct: 268 EPNCSSKDLDHGVLVVGYGSEGAQSDSNKFWIVKNSWGTGWGMSGYVKMARDQSNHCGIA 327

Query: 302 NYAVYALI 309
             A Y  +
Sbjct: 328 TAASYPTV 335


>gi|354507493|ref|XP_003515790.1| PREDICTED: cathepsin L1-like [Cricetulus griseus]
 gi|344259154|gb|EGW15258.1| Cathepsin L1 [Cricetulus griseus]
          Length = 333

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/306 (37%), Positives = 165/306 (53%), Gaps = 15/306 (4%)

Query: 16  KYKKDYRKKATDSK---KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK 72
           K+K  YR+    ++   ++  W+ N K I  HN E  +G HGYT+  N   D+    + +
Sbjct: 31  KWKSTYRRLYGTNEEEWRRAVWEKNMKMIELHNGEYSEGKHGYTMEMNAFGDMTNEEFRQ 90

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
            +    H + R+  V   +    + +P  +DWREKG +TP  NQ  CG+C+AFS   A++
Sbjct: 91  LVNGYKHQKHRKGKVF--QEPLMLQLPKSVDWREKGCVTPVKNQGQCGSCWAFSACGALE 148

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+   T  +  LS Q +VDCS   GN GC GG +     YV    GL  EE YPY+ K 
Sbjct: 149 GQMCLKTGVLVSLSEQNLVDCSQAEGNQGCNGGLMDFAFQYVLNNKGLDSEESYPYEAKD 208

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             CK+K P       +  V  PQ E AL   +ATVGPIA++I+AS  +FQ Y+SGIY + 
Sbjct: 209 GTCKYK-PEFAAANDTGYVDIPQLEKALMKAVATVGPIAIAIDASHPSFQFYSSGIYYEP 267

Query: 253 ACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANY 303
            C+S  ++H +L+VGY         +  WI+KN W   WG  G+ ++ K  NN CG+A  
Sbjct: 268 NCSSKELDHGVLVVGYGFEGTDSNKKKYWIVKNSWGSSWGMGGFFHIAKDKNNHCGVATA 327

Query: 304 AVYALI 309
           A Y  +
Sbjct: 328 ASYPTV 333


>gi|410256882|gb|JAA16408.1| cathepsin L1 [Pan troglodytes]
 gi|410256884|gb|JAA16409.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNNKYWLVKNSWGGEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|15214962|gb|AAH12612.1| Cathepsin L1 [Homo sapiens]
 gi|61363426|gb|AAX42388.1| cathepsin L [synthetic construct]
 gi|123988681|gb|ABM83856.1| cathepsin L [synthetic construct]
 gi|123999196|gb|ABM87178.1| cathepsin L [synthetic construct]
          Length = 333

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNVKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|164519063|ref|NP_001002813.2| cathepsin Q-like 2 precursor [Rattus norvegicus]
 gi|67678196|gb|AAH97257.1| Ctsql2 protein [Rattus norvegicus]
 gi|149039735|gb|EDL93851.1| rCG24202 [Rattus norvegicus]
          Length = 343

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/313 (38%), Positives = 171/313 (54%), Gaps = 23/313 (7%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY+K Y  +  +  K++ W+ N KKI  HN+E   G + Y +  N+ +DL    +   +T
Sbjct: 35  KYEKLYSPE-EELLKRVVWEENVKKIELHNRENSLGKNTYIMEINNFADLTDEEFKDMIT 93

Query: 76  RLT-------HSRIRRTLVRSPESNE---SVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
            +T        S  +R L  SP  N       +P  +DWR++G++T    Q  C +C+AF
Sbjct: 94  GITLPINNTMKSLWKRAL-GSPFPNSWYWRDALPKSIDWRKEGYVTRVREQGKCKSCWAF 152

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
            +A AI+GQ+FK T ++  LS+Q +VDCS   GN GC GG+  N   YV   GGL  E  
Sbjct: 153 PVAGAIEGQMFKKTGKLTPLSVQNLVDCSKPQGNKGCRGGTTYNAFQYVLQNGGLESEAT 212

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPYKGK+ +CK+   N    I+ +  L P+DE  L   LAT GP+A  I+    + + Y 
Sbjct: 213 YPYKGKEGLCKYNPKNAYAKITRFVAL-PEDEDVLMDALATKGPVAAGIHVVYSSLRFYK 271

Query: 246 SGIYDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNN 296
            GIY +  C ++ VNHA+L+VGY          N W++KN W   WG  GYM + K  NN
Sbjct: 272 KGIYHEPKC-NNRVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKQWGLKGYMKIAKDRNN 330

Query: 297 RCGIANYAVYALI 309
            CGIA +A Y ++
Sbjct: 331 HCGIATFAQYPIV 343


>gi|405966499|gb|EKC31777.1| Cathepsin L [Crassostrea gigas]
          Length = 331

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 176/316 (55%), Gaps = 10/316 (3%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + NK+    ++  ++ +KK Y +   +  ++L W+ N   I  HN  A +G H Y L +N
Sbjct: 19  ILNKDLDGDWVLYKQTHKKTYSQDE-EQMRRLIWEDNVNYIQKHNLAADRGEHTYWLGQN 77

Query: 61  HLSDLHPRHYIKEMT--RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQED 118
             +D+    +   M   +++ +R +  L  SP SN   L PD +DWR++G++T   NQ  
Sbjct: 78  EYADMTIFEFRAIMNGYKMSANRTKGDLYMSP-SNIGDL-PDSVDWRKEGYVTDIKNQGH 135

Query: 119 CGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAG 178
           CG+C++FS   +++GQ FK++ ++  LS Q +VDCS   GN GC GG + N   Y++   
Sbjct: 136 CGSCWSFSATGSLEGQHFKASKKLVSLSEQNLVDCSKKEGNHGCQGGLMDNAFRYIESNK 195

Query: 179 GLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASP 238
           G+  EE YPY  K   C FK  N+    + +  +P   E  L+  +ATVGPI+V I+A  
Sbjct: 196 GIDTEESYPYTAKNGFCHFKAENVGATDTGYVDIPHMQEDKLQEAVATVGPISVGIDAGH 255

Query: 239 HTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG 294
            +FQLY  G+Y + AC+S  ++H +L VGY   S    W++KN W   WG  GY+ + R 
Sbjct: 256 KSFQLYREGVYSEPACSSSKLDHGVLAVGYGTESGDDYWLVKNSWGTSWGMQGYVMMARN 315

Query: 295 -NNRCGIANYAVYALI 309
            +N CGIA  A Y  +
Sbjct: 316 KHNMCGIATQASYPKV 331


>gi|253796148|gb|ACT35690.1| cathepsin L-like cysteine proteinase [Ditylenchus destructor]
          Length = 376

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 174/301 (57%), Gaps = 13/301 (4%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK--EMTR 76
           K +  + T++++ L + S+ + I  HN++ +QG   + L  N ++DL    Y K     R
Sbjct: 79  KSFYDEDTENERMLAFLSSQQHIKKHNEQYEQGKVSFKLDANSIADLPFSEYQKLNGYRR 138

Query: 77  LTHSRIRRTLVR--SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
           +    +RR   R  +P +   V +P+ +DWR+ G++T   NQ  CG+C+AFS   +++GQ
Sbjct: 139 IYGDPLRRNSSRFLAPHN---VEVPESMDWRDHGYVTEVKNQGMCGSCWAFSATGSLEGQ 195

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
             +S   +  LS Q +VDCS   GN GC GG +     Y++   G+  E  YPYK +Q  
Sbjct: 196 HKRSKGTLVSLSEQNLVDCSAAYGNNGCNGGLMDFAFQYIKENHGIDTETSYPYKARQKK 255

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C F+R ++  D + +  LP  DE  LK+ +AT GPI+V+I+A   +FQLY +G+Y ++ C
Sbjct: 256 CHFQRSSVGADDTGFMDLPEGDEDQLKIAVATQGPISVAIDAGHRSFQLYKTGVYYEKEC 315

Query: 255 TSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           +S+ ++H +L+VGY  +      WI+KN W   WG+ GY+ + R  NN CGIA  A Y L
Sbjct: 316 SSEQLDHGVLVVGYGTDPDHGDYWIVKNSWGTTWGEQGYVRMARNKNNHCGIATKASYPL 375

Query: 309 I 309
           +
Sbjct: 376 V 376


>gi|291224870|ref|XP_002732425.1| PREDICTED: cathepsin L2-like [Saccoglossus kowalevskii]
          Length = 326

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 173/305 (56%), Gaps = 13/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ Y K+Y +K  ++ + + W  N K I  HN++   G   YT   N   DL    Y + 
Sbjct: 26  KRTYGKEYTQKE-EALRHMIWNVNLKMIQMHNEKYMSGKSTYTQNMNQFGDLTNEEYREL 84

Query: 74  MTRLTHSRIRRTLVRSPES---NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           M    + +  +T++  P +     +   P  +DWR +G++T   +Q  CG+C+AFS   +
Sbjct: 85  M--CGYKKSNKTVISKPSTFLLPSNYRAPASIDWRTQGYVTDVKDQGACGSCWAFSSTGS 142

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ FK T ++  LS QQ+VDCS   GN+GC GG +    +Y++  G    E+ YPY G
Sbjct: 143 LEGQTFKKTGKLVPLSEQQLVDCSGDYGNMGCGGGWMDQAFSYIKDKG-EESEDGYPYTG 201

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +    +V   + ++ +P  DE+AL+  +ATVGPI+V+I+A+  +FQ Y SG+YD
Sbjct: 202 TDDTCVYDASKVVATDTGYTDIPEMDENALQQAVATVGPISVAIDATHSSFQFYESGVYD 261

Query: 251 DEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           +  C+   ++HA+L VGY  +      WI+KN WS  WG  GY+ + R  +N+CGIA+ A
Sbjct: 262 EPECSQTNLDHAVLAVGYGTSEEGLDYWIVKNSWSTGWGMQGYIEMSRNKDNQCGIASKA 321

Query: 305 VYALI 309
            Y ++
Sbjct: 322 SYPVV 326


>gi|33348834|gb|AAQ16117.1| cathepsin L-like cysteine proteinase A [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 332

 Score =  204 bits (520), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 108/299 (36%), Positives = 161/299 (53%), Gaps = 6/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y     +  +   +  N   I  HN +  +GL  Y L  N   DL    + K    
Sbjct: 34  HKKSYESHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFAKIFNG 93

Query: 77  LTHSRIRRTLVRSPESN-ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
               R  R     P +N     +P  +DWR+KG +TP  +Q  CG+C+AFS   +++GQ 
Sbjct: 94  YRGQRTSRGSTFMPPANVNDSSLPSTVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQH 153

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F    E+  LS Q +VDCS   GN GC GG + N   Y++   G+  EE YPY+     C
Sbjct: 154 FLKDGELVSLSEQNLVDCSQSFGNNGCEGGLMDNAFKYIKANDGIDAEESYPYEAMDDKC 213

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           +FK+ ++    + +  +    E  LK  +ATVGPI+V+I+A   +FQLY+ G+YD+  C+
Sbjct: 214 RFKKEDVGATDTGFVDIEGGSEDDLKKAVATVGPISVAIDAGHSSFQLYSEGVYDEPECS 273

Query: 256 SDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           S+ ++H +L VGY     +  W++KN W   WGDNGY+ + R  NN+CGIA+ A Y L+
Sbjct: 274 SEELDHGVLAVGYGVKDGKKYWLVKNSWGGSWGDNGYILMSRDKNNQCGIASAASYPLV 332


>gi|410904753|ref|XP_003965856.1| PREDICTED: cathepsin S-like [Takifugu rubripes]
          Length = 334

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 169/301 (56%), Gaps = 6/301 (1%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + + Y  +  +  ++  W+ N + I+ HN EA  GLH Y L  NH+ DLH    +  
Sbjct: 35  KKTHSRTYESEVEEGSRREVWEKNLRLINMHNLEASMGLHTYELGMNHMGDLHAEEILPT 94

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           +T LT    R+       ++E   +P  +DWR+KG +T    Q  CG+C+AFS A A++G
Sbjct: 95  LTTLTPPSERQRGQSIFVTSEGADLPQTVDWRDKGLVTSVKKQGSCGSCWAFSAAGALEG 154

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+ K+T  + +LS Q +VDCS   GN GC GG +     YV    G+  E  YPY+G+  
Sbjct: 155 QLAKTTGRLVDLSPQNLVDCSGKYGNHGCNGGYMHRAFQYVIDNQGIDSEASYPYRGQVQ 214

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C +       + S +  L   DE  L+  +A++GPI+V+I+A    F  Y SG+YDD +
Sbjct: 215 QCHYNPAFRAANCSQYRFLTQGDEGNLQAAVASIGPISVAIDAKQPKFYFYKSGVYDDPS 274

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           C S  +NHA+L VGY     ++ W++KN W   +GD GY+ + R  N++CGIA +A + +
Sbjct: 275 C-SQTINHAVLAVGYGTLNGQDYWLVKNSWGVKFGDKGYIRMVRNKNDQCGIAQFACFPI 333

Query: 309 I 309
           +
Sbjct: 334 M 334


>gi|340381055|ref|XP_003389037.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 161/303 (53%), Gaps = 17/303 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           KDY  +  +  ++  W++N K +  HN  A +   G+TL  N  +DL    +        
Sbjct: 32  KDYSSEKEELYRQTIWEANKKIVLEHNANADK--WGWTLEMNAFADLESSEFAAMYNGYR 89

Query: 79  HSRIRRTLVR--SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
            S  +    R   P  N    +PD +DWR KG +TP  NQ+ CG+C+AFS   +++GQ F
Sbjct: 90  RSARKSNATRYHVPTGN---ALPDTVDWRTKGAVTPVKNQKQCGSCWAFSTTGSLEGQTF 146

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
                +  LS QQ+VDCS   GN GC GG + N   Y++  GG+  E  YPY+ K   C+
Sbjct: 147 LKKGTLPSLSEQQLVDCSDKYGNHGCQGGLMDNAFKYIEANGGIDSEASYPYEAKNGKCR 206

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           F++  +    + +  +P  D   L+  +A VGPI+V+++AS  +FQLYA+G+YD   C+S
Sbjct: 207 FQQSAVAATCTGYKDIPHDDIDGLQDAVANVGPISVAMDASHSSFQLYAAGVYDPLLCSS 266

Query: 257 DYVNHAMLLVGY----------TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306
             ++H +L VGY           +  W++KN W   WG  GY  + R +N+CGIA  A Y
Sbjct: 267 TRLDHGVLAVGYGTEPSGLFHEEKPYWLVKNSWGPDWGQQGYFKIVRKDNKCGIATDASY 326

Query: 307 ALI 309
             +
Sbjct: 327 PTV 329


>gi|342675481|gb|AEL31666.1| cathepsin L [Cynoglossus semilaevis]
          Length = 336

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 157/290 (54%), Gaps = 10/290 (3%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N  KI  HN E   G H Y L  NH  D+    + + M        R+ +   
Sbjct: 47  RRMIWEKNLNKIELHNLEHSMGKHSYRLGMNHFGDMTHEEFRQIMNGYQRKTERKAIGSL 106

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
                 ++ P  +DWREKG++TP  +Q  CG+C+AFS   A+ZGQ F+   ++  LS Q 
Sbjct: 107 FMEPNFMVAPSAVDWREKGYVTPVKDQGQCGSCWAFSTTGALZGQNFRKMGKLVSLSEQN 166

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVDISS 208
           +VDCS   GN GC GG +     YV+   GL  E+ YPY G     C +      V+ + 
Sbjct: 167 LVDCSRPEGNEGCGGGLMDQAFQYVKDNQGLDSEDSYPYLGTDDQPCHYDPKYNSVNDTG 226

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           +  +P   EHAL   +A+VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L VGY
Sbjct: 227 FVDIPSGKEHALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLAVGY 286

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                    +  WI+KN WS  WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 287 GFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 336


>gi|10946820|ref|NP_067420.1| cathepsin 6 precursor [Mus musculus]
 gi|9931384|gb|AAG02172.1|AF223401_1 cathepsin-6 [Mus musculus]
 gi|12838129|dbj|BAB24093.1| unnamed protein product [Mus musculus]
 gi|16445021|gb|AAK00510.1| cathepsin 6 precursor [Mus musculus]
 gi|68534635|gb|AAH99455.1| Cathepsin 6 [Mus musculus]
 gi|148709368|gb|EDL41314.1| cathepsin 6 [Mus musculus]
          Length = 334

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 169/306 (55%), Gaps = 14/306 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K+Y+K Y  +    ++ + W+ N + I  HN E   G + +TL+ N   DL P    K 
Sbjct: 33  KKQYEKSYTMEEEGLRRAI-WEENMRMIKLHNWENSLGKNNFTLKMNEFGDLTPEELRKM 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M      S  +R ++R     +  ++P  +DWR+KG++T    Q+ C +C+AF++  AI+
Sbjct: 92  MNNFPIWSHKKRKIIRKRAVGD--VLPKFVDWRKKGYVTRVRRQKFCNSCWAFAVNGAIE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+FK T ++  LS+Q +VDC+   GN GC  G       YV   GGL  E  YPY+GK+
Sbjct: 150 GQMFKKTGKLTPLSVQNLVDCTKTQGNDGCQWGDPYIAYEYVLNNGGLEAEATYPYEGKE 209

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C++   N   +I+ +  L P+ E  L   +AT+GPI+ +++AS + F  Y  GIY   
Sbjct: 210 GPCRYNPKNSKAEITGFVSL-PESEDILMEAVATIGPISAAVDASFNRFSFYDGGIYHQP 268

Query: 253 ACTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
            C+++ VNHA+L+VGY            W++KN W   WG  GYM + R  NN CGIA Y
Sbjct: 269 NCSNNTVNHAVLVVGYGTEGNETDGNKYWLIKNSWGRRWGIGGYMKIIRDQNNHCGIATY 328

Query: 304 AVYALI 309
           A Y ++
Sbjct: 329 AHYPIV 334


>gi|213623960|gb|AAI70453.1| Hypothetical protein LOC100127265 [Xenopus laevis]
          Length = 331

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 166/302 (54%), Gaps = 8/302 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ Y K Y  +  + +++L W+ N K I +HN E  QG H Y +  N L D+     ++ 
Sbjct: 32  KRTYHKQYNGQMDELQRRLIWEKNFKMITSHNFEYNQGPHTYEMAMNQLGDMTSEEVVRT 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           MT L  H R + T +          +PD +D+R+KG++TP  NQ  CG+C+AFS   A++
Sbjct: 92  MTGLKIHKRNKPTNLTFEHDKAPEKVPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGALE 151

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+ K   ++  LS Q +VDC  +  N GC GG + N   YV+   G+  E+ YPY G+ 
Sbjct: 152 GQLKKKKGKLVVLSPQNLVDC--VKKNDGCGGGYMTNAFEYVRDNKGIDSEKAYPYVGED 209

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C +           +  +   +E ALK  +A VGP++V I+A   +FQ Y+ G+Y D+
Sbjct: 210 QECMYNVSGRAAACKGYKEVQEGNEKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDK 269

Query: 253 ACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYA 307
            C+++ +NHA+L VGY        WI+KN W   WGD GY+ + K   N CGIAN A Y 
Sbjct: 270 DCSAEDINHAVLAVGYGTQKKAKYWIVKNSWGEEWGDKGYILMAKDKGNACGIANLASYP 329

Query: 308 LI 309
           ++
Sbjct: 330 VM 331


>gi|354504282|ref|XP_003514206.1| PREDICTED: cathepsin J-like [Cricetulus griseus]
 gi|344250851|gb|EGW06955.1| Cathepsin J [Cricetulus griseus]
          Length = 334

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 15/306 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +KKY+K Y ++    K+ + W+ N + I THN E  QG HG+T+  N   D+    Y   
Sbjct: 33  KKKYEKSYSQEEEVWKRAV-WEKNMQMIRTHNGEDGQGKHGFTVEMNAFGDMTGEEYRTF 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           +T +   + ++   V++P  N+   +P   DW +KGF+TP   Q  CG+C+AF+   AI+
Sbjct: 92  LTDIPVPAAVKVKSVQNPLLND---LPKSEDWTKKGFVTPVRKQGQCGSCWAFAAIGAIE 148

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+F  T  +  LS+Q ++DCS   GN GC  G   +   YV   GGL  EE YPY+ K 
Sbjct: 149 GQMFWRTGNLTTLSVQNLLDCSKPQGNNGCVRGDAYSAYQYVLHNGGLEAEETYPYEAKD 208

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C++   N    I+    LP  +++ L V ++ +GP+A +I+AS  +F+ Y  GIY + 
Sbjct: 209 GPCRYNPNNSRAYITEVVSLPAHEDYLL-VAVSMIGPVAAAIDASHDSFRFYRGGIYHEP 267

Query: 253 ACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANY 303
            C+S   NHA+L+VGY          N W++KN W   WG  GYM + K  NN C IA+Y
Sbjct: 268 NCSSYLTNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGMKGYMKIAKDQNNHCAIASY 327

Query: 304 AVYALI 309
           A +  I
Sbjct: 328 ASFPNI 333


>gi|291383486|ref|XP_002708337.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 333

 Score =  204 bits (519), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 163/290 (56%), Gaps = 12/290 (4%)

Query: 29  KKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVR 88
           +++  W+ N + I  HN E  QG  G+++  N   D+    + + M    H   ++  V 
Sbjct: 47  RRRAVWEKNMRMIELHNGEYSQGKRGFSMAMNAYGDMTSEEFRQVMNGFHHQPDKKEKVF 106

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
                + V  P  +DWR+KG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q
Sbjct: 107 GKAVFQEV--PSSVDWRDKGYVTPVKNQGRCGSCWAFSATGALEGQMFRKTGRLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            ++DCS  +GN GC GG   +   YV+  GGL  E+ YPY+ +  +C++     V + + 
Sbjct: 165 NLIDCSWPAGNYGCRGGLPDHAFQYVKDNGGLDSEDSYPYEARDGLCRYSPQESVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           +  +P Q+E AL   +ATVGPIAV+I+AS  +F  Y  GIY +  C+ + ++HA+L+VGY
Sbjct: 225 FVQIPEQEE-ALMEAVATVGPIAVAIDASHSSFLFYKEGIYYEPNCSRENLDHAVLVVGY 283

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                    +  W++KN W   WG +GYM + K  NN CGIA  A Y  +
Sbjct: 284 GFEGAESDNQKYWLVKNSWGKGWGMDGYMKMAKDRNNHCGIATAASYPTV 333


>gi|443694581|gb|ELT95681.1| hypothetical protein CAPTEDRAFT_173171 [Capitella teleta]
          Length = 342

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/304 (38%), Positives = 172/304 (56%), Gaps = 19/304 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ Y K Y  K    ++ L W+ N + I  HN +   G H +++  N LSDL P  Y ++
Sbjct: 44  KETYGKSYDMKEDVVRRSL-WEGNLRHISMHNVKHDLGKHSFSMGINELSDLTPSEY-RQ 101

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
              L  +   RT  +   + E V  P+H+DWR+KG++TP  NQ  CG+C+AFS   +++G
Sbjct: 102 RLGLRPALGERTGKKFVYNGEKV--PEHVDWRDKGYVTPVKNQGACGSCWAFSSTGSLEG 159

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q F+ T ++  LS Q +VDC+   GN GC GG + N  NYV+   G+  E  YPY+G   
Sbjct: 160 QHFRLTGQLVSLSEQNLVDCTKKYGNAGCNGGWMDNAFNYVKANNGIDTEAFYPYEGHDD 219

Query: 194 ICKF------KRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
            C +      K  N    +     +   DE ALK  +ATVGP++V I+A+  +FQLY SG
Sbjct: 220 WCGYDGSPGHKGANCTGHVD----VQQGDELALKQAVATVGPVSVGIDATHRSFQLYKSG 275

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           IYD+ AC++   +HA+L+VGY        W++KN W   WG +GY+ + R   N+C IA+
Sbjct: 276 IYDEVACSNSSTDHAVLVVGYGSQGGHDYWLVKNSWGTSWGMDGYIMMSRNKGNQCAIAS 335

Query: 303 YAVY 306
           YA Y
Sbjct: 336 YASY 339


>gi|383410403|gb|AFH28415.1| cathepsin L1 preproprotein [Macaca mulatta]
          Length = 333

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 159/290 (54%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE  QG H +T+  N   D+    + + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YV   GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKY-NPEYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W+ KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNSKYWLGKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|431917800|gb|ELK17041.1| Cathepsin L1 [Pteropus alecto]
          Length = 334

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 111/291 (38%), Positives = 163/291 (56%), Gaps = 15/291 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN+E  Q  HG+T+  N   D+    + + M    + + ++  V R
Sbjct: 48  RRAVWEKNMKMIELHNREYSQRKHGFTMAMNAFGDMTNEEFRQIMNGFQNQKHKKGKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   +   IP  +DWR+KG++TP  NQ  CG+C+AFS   +++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFAQ---IPPSVDWRQKGYVTPVKNQGQCGSCWAFSATGSLEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-ICKFKRPNIVVDIS 207
            +VDCS   GN GC GG + N   Y++  GGL  EE YPY  K+S  C +K P       
Sbjct: 165 NLVDCSRSQGNEGCNGGLMDNAFQYIKDNGGLDSEESYPYLAKESDTCNYK-PEYSAAND 223

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
           +  V  PQ E +L   +ATVGPI+V+I+A   +FQ Y  GIY +  C+S  ++H +L++G
Sbjct: 224 TGFVDIPQREKSLMKAVATVGPISVAIDAGHSSFQFYNKGIYYEPDCSSKDLDHGVLVIG 283

Query: 268 Y--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y        +   WI+KN W   WG NGY+ + K  NN CGIA  A Y  +
Sbjct: 284 YGSEGGDPKSNKFWIVKNSWGPEWGMNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|224460525|gb|ACN43674.1| cathepsin L [Paralichthys olivaceus]
          Length = 334

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 167/306 (54%), Gaps = 15/306 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ + Y   + + K+   W  N + +  HN  A QG   Y L     +DL    + + + 
Sbjct: 32  KFGRSYNSSSEEDKRMQIWLRNREIVMAHNAMADQGHSTYRLGMTFYADLEHEEFKQTVF 91

Query: 76  RLTHSRIRRTLVRSPESNESVL-------IPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
            +       +    P    S L       +P  +DWR+ GF+TP  NQ  CG+C++FS  
Sbjct: 92  GVCLGSFNAS---KPRGGSSFLKMHRFYNLPQTIDWRQWGFVTPVKNQGSCGSCWSFSST 148

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++GQ F+ T  +  LS Q++VDCS   GN GC GG + N   Y+   GG+  E+ YPY
Sbjct: 149 GALEGQNFRKTGRLVSLSEQELVDCSGNYGNYGCNGGWMDNAFRYIVNKGGIHTEDSYPY 208

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +G+   C+     I    + +  +P  +EHALK  +AT GP++V+I+AS  +FQLY SG+
Sbjct: 209 EGQVGQCRANYGEIGATCTGYYDIPSGNEHALKEAVATFGPVSVAIHASDQSFQLYHSGV 268

Query: 249 YDDEACTSDYVNHAMLLVG----YTRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANY 303
           Y++  C+   ++HA+L+VG    Y ++ W++KN W   WGD GY+ + R   N+CGIA+ 
Sbjct: 269 YNNPYCSGTALDHAVLIVGYGTEYGQDYWLVKNSWGPAWGDQGYIKMSRNRYNQCGIASA 328

Query: 304 AVYALI 309
           A + L+
Sbjct: 329 ASFPLV 334


>gi|37786769|gb|AAO64471.1| cathepsin L precursor [Fundulus heteroclitus]
          Length = 337

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 111/293 (37%), Positives = 162/293 (55%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR---TL 86
           ++L W+ N KKI  HN E   G H Y L  NH  D+    + + M    H   R+   +L
Sbjct: 48  RRLVWEKNLKKIELHNLEHSMGKHSYRLGMNHFGDMTHEEFKQIMNGYKHKAERKFKGSL 107

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E+   P  +DWREKG++TP  +Q +CG+C+AFS   A++GQ F  T ++  LS
Sbjct: 108 FLEPNFLEA---PRSVDWREKGYVTPVKDQGECGSCWAFSTTGALEGQEFTRTGKLVSLS 164

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +V+CS   GN GC GG +     YV+   GL  E+ YPY G     C +       +
Sbjct: 165 GQNLVECSRPEGNEGCNGGLMDQAFQYVKDNQGLDSEDSYPYLGTDDQPCHYDPKFSAAN 224

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P  +E AL   +A+VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L 
Sbjct: 225 DTGFVDIPSGNERALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLA 284

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS +WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 285 VGYGFQGEDVDGKKFWIVKNSWSENWGDKGYIYMAKDRKNHCGIATAASYPLV 337


>gi|47213723|emb|CAF95154.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 334

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 172/298 (57%), Gaps = 6/298 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K Y+ +  +  ++  W+SN + I+ HN EA  GLH Y L  NH+ D      ++ 
Sbjct: 37  KKTHDKMYQSEVEERSRRELWESNLRLINMHNLEASMGLHTYQLGMNHMGDWSQEEIVQA 96

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
            T+LT     +  +   +++    +P  +DWR KG +T    Q  CG+C+AFS A A++G
Sbjct: 97  GTKLTPPSDHQRGLAYFDASGRADLPATVDWRNKGLVTSVKMQGSCGSCWAFSAAGALEG 156

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
            + K+T ++ +LS Q +VDC+   GN GC GG + +T  YV    G+  E  YPY G++ 
Sbjct: 157 LLAKTTGKLVDLSPQNLVDCTRKYGNHGCNGGYMHHTFQYVIDNHGIDSEASYPYTGQEG 216

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
           +C++       + S +  L   DE AL+  +AT+GPI+V I+A+ H F  Y SG+Y+D  
Sbjct: 217 VCRYNPAFRAANCSHYWFLRQGDEGALQEAVATIGPISVGIDATRHQFVYYRSGVYNDPG 276

Query: 254 CTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           C S  VNHA+L VGY  ++    W++KN W   +G++GY+ + R  N++CGIA +  +
Sbjct: 277 C-SQTVNHAVLAVGYGTDNGQDYWLVKNSWGVGFGEDGYIRMARNKNDQCGIAQFPCF 333


>gi|344953542|gb|AEN28617.1| cathepsin L-like cysteine protease [Epinephelus coioides]
          Length = 336

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 110/293 (37%), Positives = 161/293 (54%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT---RLTHSRIRRTL 86
           +++ W+ N KKI  HN E   G H Y L  NH  D+    + + M    R   ++ R +L
Sbjct: 47  RRMVWEKNLKKIELHNLEHSMGTHSYRLGMNHFGDMTHEEFRQLMNGYKRKAETKARGSL 106

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E+   P  +DWR+ G++TP  +Q  CG+C+AFS   A++GQ F+ T ++  LS
Sbjct: 107 FLEPNFLEA---PKSVDWRDNGYVTPVKDQGQCGSCWAFSTTGALEGQHFRKTGKLVSLS 163

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     YV+   GL  E+ YPY G     C +      V+
Sbjct: 164 EQNLVDCSRPEGNEGCNGGLMDQAFQYVKDNQGLDSEDSYPYLGTDDQPCHYDPTYNSVN 223

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L+
Sbjct: 224 DTGFVDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLV 283

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 284 VGYGFQGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 336


>gi|193786743|dbj|BAG52066.1| unnamed protein product [Homo sapiens]
          Length = 333

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 160/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+      + M    + + R+  V +
Sbjct: 48  RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEELRQVMNGFQNRKPRKGKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q
Sbjct: 108 EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 165 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY-NPKYSVANDT 223

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 224 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 284 GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333


>gi|348514005|ref|XP_003444531.1| PREDICTED: cathepsin L1-like [Oreochromis niloticus]
          Length = 338

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 111/293 (37%), Positives = 161/293 (54%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHS---RIRRTL 86
           +++ W+ N KKI  HN +   G H Y L  NH  D+    + + M    H    +++ +L
Sbjct: 49  RRMVWEKNLKKIELHNLDHSMGKHTYRLGMNHFGDMTNEEFRQLMNGYKHKAERKVKGSL 108

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E+   P  LDWR+KG++TP  +Q  CG+C+AFS   A++GQ F+ T ++ +LS
Sbjct: 109 FLEPNFLEA---PRSLDWRDKGYVTPVKDQGQCGSCWAFSATGALEGQQFRKTGKMVQLS 165

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +V+CS   GN GC GG +     YV+   GL  EE YPY G     C +      V+
Sbjct: 166 EQNLVECSRPEGNEGCNGGLMDQAFQYVKDNQGLDSEESYPYLGTDDQKCHYDPRYNAVN 225

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +    EHAL   +  VGPI+V+I+A   +FQ Y SGIY +  C+S+ ++H +LL
Sbjct: 226 DTGFVDIKSGSEHALMKAVTAVGPISVAIDAGHESFQFYQSGIYYEPECSSEELDHGVLL 285

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 286 VGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYVYMAKDRQNHCGIATAASYPLV 338


>gi|426216524|ref|XP_004002512.1| PREDICTED: cathepsin S isoform 1 [Ovis aries]
          Length = 331

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 164/303 (54%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y +K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+     I  
Sbjct: 32  KKTYGKQYEEKNEEVARRLIWEKNLKTVMLHNLEHSMGMHSYELGMNHLGDMTSEEVISS 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+  R +      N+   +PD LDWREKG +T    Q  CG+C+AFS   A++
Sbjct: 92  MSSLRVPSQWPRNVTYKSSPNQK--LPDSLDWREKGCVTEVKYQGACGSCWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS +  GN GC GG +     Y+    G+  E  YPYK  
Sbjct: 150 AQVKLKTGKLVSLSAQNLVDCSTVKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAM 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N     S +  LP   E ALK  +A  GP++V I+A   +F LY +G+Y D
Sbjct: 210 DGRCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDAKQTSFFLYKTGVYYD 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R + N CGIAN+  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGSLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIANFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|189571697|ref|NP_001121688.1| cathepsin 8 precursor [Rattus norvegicus]
          Length = 333

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 113/305 (37%), Positives = 169/305 (55%), Gaps = 13/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + KY+K+Y  +  + +K+  W+ N K +  HN E  Q    +T+  N  +D+    + K 
Sbjct: 33  KTKYEKNYSLE-EEGQKRAVWEENMKVVKQHNIEYDQEKKNFTMELNAFADMTGEEFRKM 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           MT +    +R+   +S        +P  +DWR +G++T   NQ  C +C+AFS+A AI+G
Sbjct: 92  MTNIPVQNLRKK--KSIHQPIFRYLPKFVDWRRRGYVTSVKNQGTCNSCWAFSVAGAIEG 149

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+F+ T  +  LS Q +VDCS   GN GC  GS    L YV   GGL  E  YPY+GK+ 
Sbjct: 150 QMFRKTGRLVSLSPQNLVDCSRPEGNHGCHMGSTLYALKYVWSNGGLEAESTYPYEGKEG 209

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C++        ++ +S +  + E AL   +AT+GPI+V I+AS  +F+ Y  GIY +  
Sbjct: 210 PCRYLPRRSAARVTGFSTV-ARSEEALMHAVATIGPISVGIDASHVSFRFYRRGIYYEPR 268

Query: 254 CTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           C+S+ +NH++L+VGY         R  W++KN     WG NGYM L RG NN CGIA Y 
Sbjct: 269 CSSNRINHSVLVVGYGYEGRESDGRKYWLIKNSHGVGWGMNGYMKLARGWNNHCGIATYG 328

Query: 305 VYALI 309
            Y  +
Sbjct: 329 FYPRV 333


>gi|157311713|ref|NP_001098585.1| uncharacterized protein LOC564979 precursor [Danio rerio]
 gi|156230121|gb|AAI52284.1| Wu:fa26c03 protein [Danio rerio]
          Length = 336

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 106/292 (36%), Positives = 163/292 (55%), Gaps = 14/292 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    + + M    H   R +  + 
Sbjct: 47  RRMIWEENLRKIEQHNFEYSYGNHTFKMGMNQFGDMTNEEFRQAMNGYKHDPNRTS--QG 104

Query: 90  PESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
           P   E      P  +DWR++GF+TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S 
Sbjct: 105 PLFMEPSFFAAPQQVDWRQRGFVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSE 164

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDI 206
           Q +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V  I
Sbjct: 165 QNLVDCSRPQGNQGCNGGLMDQAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKI 224

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + AC+S  ++HA+L+V
Sbjct: 225 TGFVDIPRGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACSSSRLDHAVLVV 284

Query: 267 GYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY            WI+KN WS  WGD GY+Y+ K  NN CG+A  A Y L+
Sbjct: 285 GYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGVATSASYPLM 336


>gi|118425914|gb|ABK90856.1| cathepsin-L-like cysteine peptidase [Radix peregra]
          Length = 324

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 112/317 (35%), Positives = 178/317 (56%), Gaps = 19/317 (5%)

Query: 2   TNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENH 61
           T   W I      K Y  D      D  ++  WQ+N +KI  HN+   +GL  Y L EN 
Sbjct: 18  TEANWAIFKAKHNKTYSGD-----EDIIRRYIWQTNLQKIEAHNELYAKGLSTYFLGENK 72

Query: 62  LSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHL----DWREKGFITPDWNQE 117
            +D+    + + ++ L   R+ + L  +P    S +  D L    DWR++G++T   +Q 
Sbjct: 73  YADMTNEEFRRTLSGL---RVDKEL--TPGDFVSGMFKDSLPTAVDWRKEGYVTEVKDQG 127

Query: 118 DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177
            CG+C+AFS   +++GQ FK+T ++  LS   +VDCS   GN GC GG + N   Y+   
Sbjct: 128 QCGSCWAFSTTGSLEGQHFKATKQLVSLSESNLVDCSKKWGNQGCNGGLMDNAFKYIADN 187

Query: 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
            G+  E+ YPYK +   C FK+ N+      +  +    E AL+  +AT+GPI+V+I+AS
Sbjct: 188 KGIDTEKSYPYKPEDRKCNFKKANVGATDKLYKDITSGSEDALQEAVATIGPISVAIDAS 247

Query: 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKR 293
             +FQLY+ G+Y+++AC++  ++H +L VGY ++N    WI+KN W   WG +GY+++ R
Sbjct: 248 HDSFQLYSGGVYNEKACSTKTLDHGVLAVGYDSKNGDDYWIVKNSWGKSWGIDGYIWMSR 307

Query: 294 G-NNRCGIANYAVYALI 309
              N+CGIA  A Y ++
Sbjct: 308 NKKNQCGIATMASYPVV 324


>gi|390337642|ref|XP_780653.3| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  203 bits (517), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 110/305 (36%), Positives = 169/305 (55%), Gaps = 12/305 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K Y     ++ ++L WQ N   +  HN +   G   Y L  N  +DL    ++  
Sbjct: 32  KNEHGKRYLSDEEEASRRLIWQKNLDIVIKHNLKYDLGHFTYDLGINQFTDLQNEEFVAM 91

Query: 74  MTRLTHSRIRRTLVRS---PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           MT    S   +    S   P +N   L P  +DWR KG++TP  +Q  CG+C+AFS   +
Sbjct: 92  MTGFRVSGTSKAAKGSTFLPPNNVGEL-PKTVDWRTKGYVTPVKDQGQCGSCWAFSTTGS 150

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ FK+T ++  LS Q +VDCS    + GC GG +     Y+  AGG+  E  YPYK 
Sbjct: 151 VEGQHFKATGKLVSLSEQNLVDCS--GRDAGCDGGFMDRAFQYIIDAGGIDTEASYPYKA 208

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C FK+ N+   ++ ++ +    E AL+  +A VGPI+V+I+AS  +FQ Y SG+Y+
Sbjct: 209 VDGKCHFKKANVGATVTGYTDVTSGSEKALQKAVAHVGPISVAIDASHMSFQHYKSGVYN 268

Query: 251 DEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           +  C S  ++H +L VGY  +S     WI+KN W+  WG NGY+++ R  +N+CGIA  A
Sbjct: 269 EPGCDSTVLDHGVLAVGYGTSSDGTDYWIVKNSWAETWGMNGYVWMSRNKDNQCGIATNA 328

Query: 305 VYALI 309
            Y L+
Sbjct: 329 SYPLV 333


>gi|291383517|ref|XP_002708299.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 333

 Score =  203 bits (517), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 112/292 (38%), Positives = 161/292 (55%), Gaps = 18/292 (6%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVR 88
           ++  W+ N + I  HN E  QG HG+T+  N   D+    + + M    + + ++  + R
Sbjct: 48  RRAVWEKNMRMIELHNGEYSQGKHGFTMGMNAYGDMTNEEFRQVMNGFQNQKHKKGKMFR 107

Query: 89  SPESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
            P     +L+  P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS
Sbjct: 108 DP-----LLLQYPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFQKTGKLISLS 162

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDI 206
            Q +VDCS   GN GC GG +     YV+   GL  EE YPY+G    CK+K P   V  
Sbjct: 163 EQNLVDCSHPQGNQGCNGGLMDYAFQYVKDNSGLDSEESYPYEGMDGTCKYK-PECSVAN 221

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
            +  V  P  E AL   +ATVGPI+ +I+A   +FQ Y SGIY D  C+S  ++H +L+V
Sbjct: 222 DTGFVDIPGHEKALLRAVATVGPISAAIDAGHMSFQFYKSGIYYDPDCSSKDLDHGILVV 281

Query: 267 GY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           GY            W++KN W   WGD GY+ + R  +N CGIA  A Y  +
Sbjct: 282 GYGFEGTNSNATKYWLVKNSWGTTWGDEGYVKIIRDKDNHCGIATAASYPTV 333


>gi|157644745|gb|ABV59078.1| cathepsin L [Lates calcarifer]
          Length = 337

 Score =  203 bits (517), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 112/294 (38%), Positives = 161/294 (54%), Gaps = 17/294 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT----RLTHSRIRRT 85
           +++ W+ N KKI  HN E   G H Y L  NH  D+    + + M     R T  + + +
Sbjct: 47  RRMVWEKNLKKIELHNLEHSMGKHPYRLGMNHFGDMTHEEFRQIMNGYKQRKTERKFKGS 106

Query: 86  LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEEL 145
           L   P   E+   P  LDWR+KG++TP  +Q  CG+C+AFS   A++GQ F+ T ++  L
Sbjct: 107 LFMEPNFLEA---PRALDWRDKGYVTPVKDQGQCGSCWAFSTTGALEGQQFRKTGKLVSL 163

Query: 146 SIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI-VV 204
           S Q +VDCS   GN GC GG +     YV+   GL  E+ YPY G         PN    
Sbjct: 164 SEQNLVDCSRPEGNEGCNGGLMDQAFQYVKDNQGLDSEDSYPYLGTDDQPCHYDPNYNSA 223

Query: 205 DISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAML 264
           + + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L
Sbjct: 224 NDTGFVDVPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKDCSSEELDHGVL 283

Query: 265 LVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           +VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 284 VVGYGYEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 337


>gi|355753449|gb|EHH57495.1| Cathepsin L1 [Macaca fascicularis]
          Length = 333

 Score =  203 bits (517), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 110/292 (37%), Positives = 159/292 (54%), Gaps = 18/292 (6%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W+ N K I  HNQE  QG H +T+  N   D+    + + M    + + R+  V  
Sbjct: 48  RRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVF- 106

Query: 90  PESNESVLI---PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
               + +L    P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS
Sbjct: 107 ----QELLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLS 162

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDI 206
            Q +VDCS   GN GC GG +     YV   GGL  EE YPY+  +  CK+  P   V  
Sbjct: 163 EQNLVDCSWPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKY-NPEYSVAN 221

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
            +  V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+V
Sbjct: 222 DTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVV 281

Query: 267 GYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY   S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 282 GYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333


>gi|312386083|gb|ADQ74586.1| silicatein alpha 3 [Lubomirskia baicalensis]
          Length = 330

 Score =  203 bits (517), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 105/298 (35%), Positives = 168/298 (56%), Gaps = 9/298 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +++ Y  +  + ++   W +N K I  HN  A   L GYTL  N   DL    + +    
Sbjct: 37  HQRSYESQLQEMERHSIWVANKKYIEHHNANAD--LFGYTLAMNGFGDLMSAEFTERY-- 92

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           LTH   +R+ +++ ES + V   D LDWR +G +T   +Q  CG+ YAF+ A A++G   
Sbjct: 93  LTHKHSQRSGLQTFESPKGVTYADSLDWRTRGVVTSVQSQGQCGSSYAFAAAGALEGATA 152

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
            +  ++  LS Q ++DCS+  GN GC+GG +     YV   GG+  E  YPYKGK+S C+
Sbjct: 153 LAADKLVALSEQNIIDCSVPYGNHGCSGGDVYTAFKYVVDNGGIDTESSYPYKGKKSSCQ 212

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +   N+    +    +    E  L   +A+VGPIAV+++AS + F  Y SG++D   C++
Sbjct: 213 YNSKNVGAISTGVVKIASGSETDLLSAVASVGPIAVAVDASVNAFMFYQSGVFDSSTCST 272

Query: 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
             +NHAML+ GY     ++ W++KN W   WG++GY+ + R   N+CGIA+ A+Y ++
Sbjct: 273 SKLNHAMLVTGYGSTNGKDYWLVKNSWGTGWGESGYIKMVRNKYNQCGIASDALYPML 330


>gi|94448668|emb|CAI91572.1| silicatein a3 [Lubomirskia baicalensis]
          Length = 344

 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 105/298 (35%), Positives = 168/298 (56%), Gaps = 9/298 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +++ Y  +  + ++   W +N K I  HN  A   L GYTL  N   DL    + +    
Sbjct: 51  HQRSYESQLQEMERHSIWVANKKYIEHHNANAD--LFGYTLAMNGFGDLMSAEFTERY-- 106

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           LTH   +R+ +++ ES + V   D LDWR +G +T   +Q  CG+ YAF+ A A++G   
Sbjct: 107 LTHKHSQRSGLQTFESPKGVTYADSLDWRTRGVVTSVQSQGQCGSSYAFAAAGALEGATA 166

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
            +  ++  LS Q ++DCS+  GN GC+GG +     YV   GG+  E  YPYKGK+S C+
Sbjct: 167 LAADKLVALSEQNIIDCSVPYGNHGCSGGDVYTAFKYVVDNGGIDTESSYPYKGKKSSCQ 226

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +   N+    +    +    E  L   +A+VGPIAV+++AS + F  Y SG++D   C++
Sbjct: 227 YNSKNVGAISTGVVKIASGSETDLLSAVASVGPIAVAVDASVNAFMFYQSGVFDSSTCST 286

Query: 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
             +NHAML+ GY     ++ W++KN W   WG++GY+ + R   N+CGIA+ A+Y ++
Sbjct: 287 SKLNHAMLVTGYGSTNGKDYWLVKNSWGTGWGESGYIKMVRNKYNQCGIASDALYPML 344


>gi|350583407|ref|XP_003481511.1| PREDICTED: cathepsin S [Sus scrofa]
          Length = 331

 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 114/304 (37%), Positives = 165/304 (54%), Gaps = 12/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+     I  
Sbjct: 32  KKTYGKQYKEKNEEVARRLIWEKNLKTVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVISL 91

Query: 74  MT--RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           M+  R+     R    +S   N +  +PD +DWREKG +T    Q  CG+C+AFS   A+
Sbjct: 92  MSCVRVPSQWPRNVTYKS---NPNQKLPDSMDWREKGCVTEVKYQGSCGSCWAFSAVGAL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           + Q+   T  +  LS Q +VDCS     N GC GG +     Y+    G+  E  YPYK 
Sbjct: 149 EAQVKMKTGRLVSLSAQNLVDCSTEKYRNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKA 208

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               CK+   N     S ++ LP  DE+ALK  +A  GP++V+I+A   +F  Y SG+Y 
Sbjct: 209 VDGKCKYDSKNRAATCSRYTELPFADEYALKEAVANKGPVSVAIDAKHSSFFFYRSGVYY 268

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
           D +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R + N CGIANY  
Sbjct: 269 DPSCTQN-VNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDGGYIRMARNSENHCGIANYPS 327

Query: 306 YALI 309
           Y  I
Sbjct: 328 YPEI 331


>gi|229893789|gb|ACQ90252.1| cathepsin L [Pinctada fucata]
          Length = 362

 Score =  203 bits (516), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 104/281 (37%), Positives = 159/281 (56%), Gaps = 19/281 (6%)

Query: 39  KKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPE------- 91
           ++I  HN++   G   Y +  N  SD+    Y++      H+ +RR   +  +       
Sbjct: 83  ERIEEHNRKYHMGQKSYYMGVNQFSDMSHDEYLR------HNGLRRGNRKYSKGEGCDSY 136

Query: 92  SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVV 151
           +     + D +DWR+KG++TP  NQ  CG+C++FS   +++GQ F+ T ++  LS QQ+V
Sbjct: 137 TKSGKQLDDKVDWRDKGYVTPVKNQGQCGSCWSFSTTGSLEGQHFRQTGKLISLSEQQLV 196

Query: 152 DCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
           DCS   GN GC GG + N   Y++  GGL  E+DYPY  KQ  C  K+     + +  + 
Sbjct: 197 DCSGTFGNEGCNGGLMDNAFEYIKSIGGLEGEDDYPYTAKQGKCHLKKSLFKANDTGCTD 256

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRN 271
           +   DE ALK  LA+VGPI+V+I+AS  +FQ Y  G+YD+E C+S  ++H +L VGY   
Sbjct: 257 VESGDEDALKDALASVGPISVAIDASHASFQSYDGGVYDEEECSSQNLDHGVLTVGYGTE 316

Query: 272 S-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
                 W++KN W   WG+ GY+ + R  +N+CGIA  A Y
Sbjct: 317 ENGGDYWLVKNSWGEMWGEEGYIKMSRNKDNQCGIATQASY 357


>gi|70912393|ref|NP_783171.2| cathepsin R precursor [Rattus norvegicus]
 gi|66911479|gb|AAH97484.1| Cathepsin R [Rattus norvegicus]
 gi|149039731|gb|EDL93847.1| cathepsin R [Rattus norvegicus]
          Length = 334

 Score =  203 bits (516), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 170/305 (55%), Gaps = 14/305 (4%)

Query: 17  YKKDYRKKAT---DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K +Y K  T   +  ++  W+ N K I  HN+E   G +G+ +  N   DL    + K 
Sbjct: 32  WKTEYEKSYTMEEEGHRRAVWEENMKMIKLHNRENSLGKNGFIMEMNEFGDLTAEEFRKM 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           M  +     R+  +       +VL P  +DWR+KG++T   NQ+ C +C+AF++  AI+G
Sbjct: 92  MVNIPIRSHRKGKIIRKRDVGNVL-PKFVDWRKKGYVTRVQNQKFCNSCWAFAVTGAIEG 150

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+F  T ++  LS+Q +VDC+   GN GC  G       YV   GGL  E  YPYKGK+ 
Sbjct: 151 QMFNKTGQLTPLSVQNLVDCTKSQGNEGCQWGDPHIAYEYVLNNGGLEAEATYPYKGKEG 210

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
           +C++   +   +I+ +  L P+ E  L   +AT+GPI+V+++AS ++F  Y  G+YD+  
Sbjct: 211 VCRYNPKHSKAEITGFVSL-PESEDILMEAVATIGPISVAVDASFNSFGFYKKGLYDEPN 269

Query: 254 CTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYA 304
           C+++ VNH++L+VGY          + W++KN W   WG  GYM + K  NN C IA+YA
Sbjct: 270 CSNNTVNHSVLVVGYGFEGNETDGNSYWLIKNSWGRKWGLRGYMKIPKDQNNFCAIASYA 329

Query: 305 VYALI 309
            Y  +
Sbjct: 330 HYPTV 334


>gi|18858809|ref|NP_571273.1| cathepsin L, 1 b precursor [Danio rerio]
 gi|1752664|emb|CAA69623.1| cathepsin L [Danio rerio]
          Length = 336

 Score =  203 bits (516), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 164/292 (56%), Gaps = 14/292 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    + + M   TH   + +  + 
Sbjct: 47  RRMIWEENLRKIEQHNFEYSYGNHTFKMGMNQFGDMTNEEFRQAMNGYTHDPNQTS--QG 104

Query: 90  PESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
           P   E      P  +DWR++G++TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S 
Sbjct: 105 PLFMEPSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSE 164

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDI 206
           Q +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V  I
Sbjct: 165 QNLVDCSRPQGNQGCNGGLMDQAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKI 224

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + AC+S  ++HA+L+V
Sbjct: 225 TGFVDIPSGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACSSSRLDHAVLVV 284

Query: 267 GYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY            WI+KN WS  WGD GY+Y+ K  NN CG+A  A Y L+
Sbjct: 285 GYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGVATKASYPLM 336


>gi|306992173|gb|ADN19567.1| cathepsin L-like proteinase [Spodoptera frugiperda]
          Length = 344

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 173/327 (52%), Gaps = 22/327 (6%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW    +   K+Y  +   K    + K++ ++ H+ I  HNQ  +Q L  Y L+ N
Sbjct: 22  LVREEWNAFKMEHSKQYDSEVEDKF---RMKIYVENKHR-IAKHNQRFEQRLVSYKLKPN 77

Query: 61  HLSDLHPRHYIKEMT------------RLTHSRIRRTLVRSPESNESVLIPDHLDWREKG 108
             +D+    ++  M             +  HS+ R     +  +   V  PDH+DWR+KG
Sbjct: 78  KYADMLHHEFVHTMNGFNKTAKHGGRNKAVHSKGRDGRAATFIAPAHVSYPDHVDWRKKG 137

Query: 109 FITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLR 168
            +T   +Q  CG+C+AFS   A++GQ F+ T  +  LS Q +VDCS   GN GC GG + 
Sbjct: 138 AVTDVKDQGKCGSCWAFSTTGALEGQHFRKTGYLVSLSEQNLVDCSAAYGNNGCNGGLMD 197

Query: 169 NTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVG 228
           N   Y++  GG+  E+ YPY+     C++   N   D   +  +P  DE  L   +ATVG
Sbjct: 198 NAFKYIKDNGGIDTEKSYPYEAVDDKCRYNPKNSGADDVGFVDIPQGDEEKLMQAVATVG 257

Query: 229 PIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHW 283
           PI+V+I+AS  TFQ Y+ G+Y DE C+S  ++H +++VGY         W++KN W   W
Sbjct: 258 PISVAIDASQETFQFYSKGVYYDENCSSTDLDHGVMVVGYGTEEEGGDYWLVKNSWGRSW 317

Query: 284 GDNGYMYLKRG-NNRCGIANYAVYALI 309
           G+ GY+ +    NN CGIA+ A Y L+
Sbjct: 318 GELGYIKMAHNKNNHCGIASSASYPLV 344


>gi|148709376|gb|EDL41322.1| mCG12216, isoform CRA_b [Mus musculus]
          Length = 329

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/296 (37%), Positives = 164/296 (55%), Gaps = 23/296 (7%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTH--SRIRR 84
           + +K+  W+ N KKI  HN E   G HG+T+  N   D         M  +TH  S+   
Sbjct: 44  EEQKRAVWEENMKKIKLHNGENGLGKHGFTMEMNAFGD---------MVTMTHTASQCFP 94

Query: 85  TLVR--SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
           T+ +  S + + SV +P  ++W+++G++TP   Q  C +C+A S+  AI+GQ+F+ T ++
Sbjct: 95  TVKKGKSVQKHLSVNLPKFINWKKRGYVTPVRTQGRCNSCWAISVTGAIEGQMFQKTGQL 154

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI 202
             LS+Q +VDCS   GN GC  G+    L YV   GGL  E  YPY+ K+  C++   N 
Sbjct: 155 IPLSVQNLVDCSRPQGNRGCYVGNTYRALKYVVENGGLESEATYPYEEKEGSCRYNPENS 214

Query: 203 VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHA 262
              I+ +  + P++E AL   +AT+GPI+V+I+A   +F  Y  GIY +  C+S  V HA
Sbjct: 215 TASITGFDFV-PENEDALMNAVATIGPISVAIDARHESFLFYKRGIYHEPNCSSSVVTHA 273

Query: 263 MLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           MLLVGY         R  WI+KN     WG  GYM + R   N CGIA YA+Y  +
Sbjct: 274 MLLVGYGFVGNESEGRKYWIVKNSMGTKWGSKGYMKIARDQGNHCGIATYALYPRV 329


>gi|23956098|ref|NP_062412.1| cathepsin 7 precursor [Mus musculus]
 gi|81902493|sp|Q91ZF2.1|CAT7_MOUSE RecName: Full=Cathepsin 7; AltName: Full=Cathepsin 1; Flags:
           Precursor
 gi|16445017|gb|AAK00508.1| cathepsin 1 precursor [Mus musculus]
 gi|40352949|gb|AAH64740.1| Cathepsin 7 [Mus musculus]
 gi|148709372|gb|EDL41318.1| cathepsin 7, isoform CRA_a [Mus musculus]
          Length = 331

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/292 (38%), Positives = 162/292 (55%), Gaps = 14/292 (4%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL 86
           + +++  W+ N K I  H  E    ++ +T+  N   D+      +EM  LT S      
Sbjct: 45  EKQRRAVWEGNVKWIKQHIMENGLWMNNFTIEMNEFGDMTG----EEMKMLTESSSYPLR 100

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
                   +  IP  LDWR++G++TP   Q  CGAC+AFS+ + I+GQ+FK T ++  LS
Sbjct: 101 NGKHIQKRNPKIPPTLDWRKEGYVTPVRRQGSCGACWAFSVTACIEGQLFKKTGKLIPLS 160

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDI 206
           +Q ++DCS+  G  GC GG   +   YV+  GGL  E  YPY+ K   C+++    VV +
Sbjct: 161 VQNLMDCSVSYGTKGCDGGRPYDAFQYVKNNGGLEAEATYPYEAKAKHCRYRPERSVVKV 220

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + + V+ P++E AL   L T GPIAV+I+ S  +F  Y  GIY +  C  D ++H +LLV
Sbjct: 221 NRFFVV-PRNEEALLQALVTHGPIAVAIDGSHASFHSYRGGIYHEPKCRKDTLDHGLLLV 279

Query: 267 GY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           GY         R  W+LKN     WG+NGYM L RG NN CGIA+YA+Y  +
Sbjct: 280 GYGYEGHESENRKYWLLKNSHGERWGENGYMKLPRGQNNYCGIASYAMYPAL 331


>gi|261289789|ref|XP_002611756.1| hypothetical protein BRAFLDRAFT_236363 [Branchiostoma floridae]
 gi|229297128|gb|EEN67766.1| hypothetical protein BRAFLDRAFT_236363 [Branchiostoma floridae]
          Length = 308

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 173/300 (57%), Gaps = 9/300 (3%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY---IKEMT 75
           K Y   + ++ +   ++ N K +  HN+EA  G H + ++ N   DL    +   +    
Sbjct: 9   KQYNSLSEENARHSIFEENSKIVKQHNEEAAMGKHTFFMKMNKFGDLTTEEFRMIVIGSG 68

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +  ++ ++      ES   + + D +DWR+KG +T   NQE CG+C+AFS   +++GQ 
Sbjct: 69  FMQSNKTQQAEGGVFESLPGLKVDDTVDWRQKGAVTKVKNQEQCGSCWAFSATGSLEGQH 128

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK-QSI 194
           F  T+ +  LS Q +VDCS   GN GC GGS+     Y++  GG+  EE Y Y+G+ +S+
Sbjct: 129 FLKTNNLVSLSEQNLVDCSRREGNKGCKGGSMDQAFKYIKMNGGIDTEECYSYRGRDESM 188

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C++K       +SS++ +   DE AL   ++TVGPI+V+I+A   +FQLY  G+YD+  C
Sbjct: 189 CRYKSSCSGATLSSYTDIKTGDEMALMQAVSTVGPISVAIDAGHKSFQLYHHGVYDEPKC 248

Query: 255 TSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           +S +++H +L VGY  ++    W++KN W   WG  GY+ + R  +N+CGIA  A+Y ++
Sbjct: 249 SSTHLDHGVLAVGYGSSNGSDYWLVKNSWGTEWGMEGYIMMSRNKHNQCGIATRAIYPVV 308


>gi|417409876|gb|JAA51427.1| Putative cathepsin s, partial [Desmodus rotundus]
          Length = 342

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/303 (37%), Positives = 169/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+        
Sbjct: 43  KKTYGKQYKEKNEEGVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVTAL 102

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +    +SN +  +PD +DWR+KG +T    Q  CG+C+AFS   A++
Sbjct: 103 MSSLRVPSQWQRNVTY--KSNPNQKLPDSVDWRDKGCVTDVKYQGSCGSCWAFSAVGALE 160

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS+    N GC GG +     Y+    G+  E  YPYK  
Sbjct: 161 AQVKLKTGKLVSLSAQNLVDCSVGKYSNRGCNGGFMTEAFQYIIDNNGIESEASYPYKAM 220

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E ALK  +A  GP++V+I+AS  +F LY SG+Y D
Sbjct: 221 DGKCQYDSKYRAATCSRYTELPEDSEDALKEAVANKGPVSVAIDASHPSFFLYRSGVYYD 280

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            ACT  +VNH +L+VGY     ++ W++KN W  H+GD GY+ + R + N CGIA+YA Y
Sbjct: 281 PACTL-HVNHGVLVVGYGNLNGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIASYASY 339

Query: 307 ALI 309
             I
Sbjct: 340 PEI 342


>gi|27465595|ref|NP_775155.1| testin-2 precursor [Rattus norvegicus]
 gi|1174639|sp|P15242.2|TEST2_RAT RecName: Full=Testin-2; AltName: Full=CMB-23; Contains: RecName:
           Full=Testin-1; AltName: Full=CMB-22; Flags: Precursor
 gi|577430|gb|AAC52162.1| testin [Rattus norvegicus]
 gi|149039744|gb|EDL93860.1| testin gene [Rattus norvegicus]
          Length = 333

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 165/289 (57%), Gaps = 12/289 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           K+  W+ N K I  HN E  +G H +T+  N   DL    ++K MT     +I++T +  
Sbjct: 48  KRAVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIF- 106

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
            + ++ + +P  +DWR+ G++TP  NQ  C + +AFS   +++GQ+F+ T  +  LS Q 
Sbjct: 107 -QDHQFLYVPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQN 165

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW 209
           ++DC   +   GC+GG ++    YV+  GGL  EE YPY+G+   C++   N   ++  +
Sbjct: 166 LLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRYHAENSAANVRDF 225

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY- 268
             +P  +E AL   +A VGPI+V+++AS  +FQ Y SGIY +  C   ++NHA+L+VGY 
Sbjct: 226 VQIPGSEE-ALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYG 284

Query: 269 -------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
                    + W++KN W   WG  GYM L +  +N CGIA Y+ Y ++
Sbjct: 285 FEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKDWSNHCGIATYSTYPIV 333


>gi|42744610|gb|AAH66625.1| Ctssa protein [Danio rerio]
          Length = 321

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 167/301 (55%), Gaps = 8/301 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K YR    +  ++  W+ N + I  HN+ A  GLH YTL  N LSD+     + +
Sbjct: 24  KSQHNKTYRNTREERLRRSVWEQNLQDILLHNEAAAVGLHSYTLGLNQLSDMTADE-VND 82

Query: 74  MTRLTHSRIRRT-LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L            SP S ++  +P  ++W E G ++P  NQ  CG+C+AFS   +++
Sbjct: 83  MNGLLEEDFPDVNATFSPPSLQT--LPQRVNWTEHGMVSPVQNQGPCGSCWAFSAVGSLE 140

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
            Q+ + T+ +  LS Q ++DCS+  GN GC GG L     YV    G+     YPY+ K+
Sbjct: 141 AQMKRRTAALVPLSAQNLLDCSVSLGNRGCKGGFLSRAFLYVIQNRGIDSSTFYPYEHKE 200

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
            +C++         + + ++P  +E AL+  +A +GP++V INA   +F  Y SGIY+D 
Sbjct: 201 GVCRYSVSGRAGYCTGFRIVPRHNEAALQSAVANIGPVSVGINAKLLSFHRYRSGIYNDP 260

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308
            C+S  +NHA+L+VGY     ++ W++KN W   WG+NGY+ + R  N CGI+++ +Y  
Sbjct: 261 KCSSALINHAVLVVGYGSENGQDYWLVKNSWGTAWGENGYIRMARNKNMCGISSFGIYPT 320

Query: 309 I 309
           I
Sbjct: 321 I 321


>gi|27960477|gb|AAO27843.1|AF456459_1 cathepsin R [Rattus norvegicus]
          Length = 334

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/308 (36%), Positives = 169/308 (54%), Gaps = 18/308 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +KKY K Y  +  + ++ + W+ N K I  HN E   G +G+T+  N   D     + K 
Sbjct: 33  KKKYDKSYSLEEEELRRAV-WEENLKMIKLHNGENGLGKNGFTMEINEFGDTTGEEFRKM 91

Query: 74  MTRL---THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           M      TH   +  + R+  S    + P  +DWR+KG++TP   Q +C AC+AFS+  A
Sbjct: 92  MVEFPVQTHREGKSIMKRAAGS----IFPKFVDWRKKGYVTPVRRQGNCNACWAFSVTGA 147

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           I+ Q    T ++  LS+Q +VDCS   GN GC  G       YV   GGL  E  YPYKG
Sbjct: 148 IEAQTIWQTGKLIPLSVQNLVDCSKSQGNEGCQWGDPHIAYEYVLNNGGLEAEATYPYKG 207

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           K+ +C++   +   +I+ +  L P+ E  L   +AT+GPI+V+++AS ++F  Y  G+YD
Sbjct: 208 KEGVCRYNPKHSKAEITGFVSL-PESEDILMEAVATIGPISVAVDASFNSFGFYKKGLYD 266

Query: 251 DEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIA 301
           +  C+++ VNH++L+VGY          + W++KN W   WG  GYM + K  NN C IA
Sbjct: 267 EPNCSNNTVNHSVLVVGYGFEGNETDGNSYWLIKNSWGRKWGLRGYMKIPKDQNNFCAIA 326

Query: 302 NYAVYALI 309
           +YA Y  +
Sbjct: 327 SYAHYPTV 334


>gi|217323618|gb|ACK38176.1| midgut cysteine peptidase, partial [Sphenophorus levis]
          Length = 324

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 164/298 (55%), Gaps = 9/298 (3%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ K Y+ +A ++K+   ++ N +KI  HN E +QG+H YT   N  +D+    +   + 
Sbjct: 32  KHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRAEFKAMLA 91

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
               ++      ++ +  + V +P+ +DWR +  +TP  +Q  CG+C++F++  + +G  
Sbjct: 92  TQVKTKPSIVATKTFQLADGVSVPESIDWRSRNVVTPIKDQAQCGSCWSFAVVGSTEGAY 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
             ST ++   S QQ+VDC+    N GC GG L +T  Y+Q   GL  E DYPY G    C
Sbjct: 152 ALSTGKLTRFSEQQLVDCT-TDLNYGCDGGYLDDTFPYIQ-TNGLELESDYPYTGYDGSC 209

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
            +    +V  +SS+ V  P +E AL   + T GP+A++INA     Q Y SGI DD+ C 
Sbjct: 210 SYDSSKVVTKVSSY-VSVPANEQALLEAVGTAGPVAIAINADD--LQFYFSGIIDDKYCD 266

Query: 256 SDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
            ++++H +L VGY   +    W++KN W   WG++GY    RG N CG+   AVY LI
Sbjct: 267 PEWLDHGVLAVGYNSENGLDYWLIKNSWGADWGESGYFRFLRGQNICGVKEDAVYPLI 324


>gi|253722774|pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform
          Length = 312

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+    + + M  L + + R+  V +
Sbjct: 27  RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGLQNRKPRKGKVFQ 86

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+ +AFS   A++GQ+F+ T  +  LS Q
Sbjct: 87  EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSSWAFSATGALEGQMFRKTGRLISLSEQ 143

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 144 NLVDCSGPEGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDA 202

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 203 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY 262

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 263 GFESTESDGNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 312


>gi|432910514|ref|XP_004078393.1| PREDICTED: cathepsin S-like [Oryzias latipes]
          Length = 339

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 13/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K Y  +  D  ++  W+ N   I  HN E   GLH Y L  NH+ DL     +++
Sbjct: 39  KKTHSKHYPSEEEDVHRRDLWERNLMLITMHNLEYSMGLHTYDLSMNHMGDLTQEEILQQ 98

Query: 74  MTRLTHSRIRRTLVRSPE----SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
              L   R    L R P     ++ S  IPD +DWR+K  +T    Q  CG+C+AFS   
Sbjct: 99  FASL---RPPTNLKREPHLFVGASGSNNIPDEMDWRQKNCVTSVKMQGSCGSCWAFSAVG 155

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ + T ++ +LS Q +VDCS   GN GC GG +     YV    G+  +  YPY 
Sbjct: 156 ALEGQLCRKTGKLVDLSPQNLVDCSSKYGNHGCNGGFMHQAFQYVIDNQGIDSDAGYPYV 215

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G    C +       + S +S LP  DE ALK  +AT+GPI+V+I+A+   F  Y SG+Y
Sbjct: 216 GVTQNCHYSSEYRAANCSQYSFLPEGDEGALKEAIATIGPISVAIDATRPRFAFYRSGVY 275

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           DD +C+ + VNH +L VGY     ++ W++KN W   +G+ GY+ + R  N++CGIA Y 
Sbjct: 276 DDSSCSQN-VNHGVLAVGYGTLNGQDYWLVKNSWGTTFGEQGYIRMARNKNDQCGIAMYG 334

Query: 305 VYALI 309
            Y ++
Sbjct: 335 CYPIM 339


>gi|148709373|gb|EDL41319.1| cathepsin 7, isoform CRA_b [Mus musculus]
          Length = 358

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/292 (38%), Positives = 162/292 (55%), Gaps = 14/292 (4%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL 86
           + +++  W+ N K I  H  E    ++ +T+  N   D+      +EM  LT S      
Sbjct: 72  EKQRRAVWEGNVKWIKQHIMENGLWMNNFTIEMNEFGDMTG----EEMKMLTESSSYPLR 127

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
                   +  IP  LDWR++G++TP   Q  CGAC+AFS+ + I+GQ+FK T ++  LS
Sbjct: 128 NGKHIQKRNPKIPPTLDWRKEGYVTPVRRQGSCGACWAFSVTACIEGQLFKKTGKLIPLS 187

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDI 206
           +Q ++DCS+  G  GC GG   +   YV+  GGL  E  YPY+ K   C+++    VV +
Sbjct: 188 VQNLMDCSVSYGTKGCDGGRPYDAFQYVKNNGGLEAEATYPYEAKAKHCRYRPERSVVKV 247

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + + V+ P++E AL   L T GPIAV+I+ S  +F  Y  GIY +  C  D ++H +LLV
Sbjct: 248 NRFFVV-PRNEEALLQALVTHGPIAVAIDGSHASFHSYRGGIYHEPKCRKDTLDHGLLLV 306

Query: 267 GY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           GY         R  W+LKN     WG+NGYM L RG NN CGIA+YA+Y  +
Sbjct: 307 GYGYEGHESENRKYWLLKNSHGERWGENGYMKLPRGQNNYCGIASYAMYPAL 358


>gi|8917575|gb|AAF81274.1| EPCS24 [Mus musculus]
          Length = 329

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/289 (38%), Positives = 161/289 (55%), Gaps = 14/289 (4%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL 86
           + +++  W+ N K I  H  E    ++ +T+  N   D+      +EM  LT S      
Sbjct: 45  EKQRRAVWEGNVKWIKQHIMENGLWMNNFTIEMNEFGDMTG----EEMKMLTESSSYPLR 100

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
                   +  IP  LDWR++G++TP   Q  CGAC+AFS+ + I+GQ+FK T ++  LS
Sbjct: 101 NGKHIQKRNPKIPPTLDWRKEGYVTPVRRQGSCGACWAFSVTACIEGQLFKKTGKLIPLS 160

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDI 206
           +Q ++DCS+  G  GC GG   +   YV+  GGL  E  YPY+ K   C+++    VV +
Sbjct: 161 VQNLMDCSVSYGTKGCDGGRPYDAFQYVKNNGGLEAEATYPYEAKAKHCRYRPERSVVKV 220

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + + V+ P++E AL   L T GPIAV+I+ S  +F  Y  GIY +  C  D ++H +LLV
Sbjct: 221 NRFFVV-PRNEEALLQALVTHGPIAVAIDGSHASFHSYRGGIYHEPKCRKDTLDHGLLLV 279

Query: 267 GY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           GY         R  W+LKN     WG+NGYM L RG NN CGIA+YA+Y
Sbjct: 280 GYGYEGHESENRKYWLLKNSHGERWGENGYMKLPRGQNNYCGIASYAMY 328


>gi|281352890|gb|EFB28474.1| hypothetical protein PANDA_008012 [Ailuropoda melanoleuca]
          Length = 328

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/303 (37%), Positives = 166/303 (54%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+     I  
Sbjct: 29  KKTYGKQYKEKNEEVARRLIWEKNLKFVTLHNLEHSMGMHSYDLGMNHLGDMTSEEVISL 88

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+  R +     SN+   +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 89  MSSLRVPSQWPRNVTYKSNSNQK--LPDSVDWREKGCVTKVKYQGACGACWAFSAVGALE 146

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  E  YPYK  
Sbjct: 147 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAT 206

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N     S ++ LP   E  LK  +A  GP++V+I+A   +F LY SG+Y D
Sbjct: 207 DGKCRYDSKNRAATCSKYTELPSGSEDDLKEAVANKGPVSVAIDARHSSFFLYRSGVYYD 266

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R + N CGIA+Y  Y
Sbjct: 267 PSCTQN-VNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSY 325

Query: 307 ALI 309
             I
Sbjct: 326 PEI 328


>gi|5231178|gb|AAD41105.1|AF157961_1 cysteine proteinase [Hypera postica]
          Length = 324

 Score =  202 bits (514), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/295 (37%), Positives = 166/295 (56%), Gaps = 10/295 (3%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y  +A +SK+   +  N + I  HN   +QG   Y    N  +D+    + K M  L+
Sbjct: 35  KTYLNQAEESKRFNIFTDNVRAIEAHNALYEQGKVSYKKGINKFTDMSQEEF-KTMLTLS 93

Query: 79  HSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKS 138
            SR + TL  +      V IP  +DWR++G +T   +Q DCG+C+AFSI  + +G   + 
Sbjct: 94  ASR-KPTLETTSYVKTGVEIPSSVDWRKEGRVTGVKDQGDCGSCWAFSITGSTEGAYARK 152

Query: 139 TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFK 198
           + ++  LS QQ++DC   + + GC GGSL +   YV    GL  EE Y YKG+   CK+ 
Sbjct: 153 SGKLVSLSEQQLIDCCTDT-SAGCDGGSLDDNFKYV-MKDGLQSEESYTYKGEDGACKYN 210

Query: 199 RPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDY 258
             ++V  +S ++ +P +DE AL   +ATVGP++V ++AS      Y SGIY+D+ C+   
Sbjct: 211 VASVVTKVSKYTSIPAEDEDALLEAVATVGPVSVGMDAS--YLSSYDSGIYEDQDCSPAG 268

Query: 259 VNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           +NHA+L VGY     ++ WI+KN W   WG+ GY  L RG N+CGI+   VY  I
Sbjct: 269 LNHAILAVGYGTENGKDYWIIKNSWGASWGEQGYFRLARGKNQCGISEDTVYPTI 323


>gi|301767946|ref|XP_002919405.1| PREDICTED: cathepsin S-like [Ailuropoda melanoleuca]
          Length = 340

 Score =  202 bits (514), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/303 (37%), Positives = 166/303 (54%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+     I  
Sbjct: 41  KKTYGKQYKEKNEEVARRLIWEKNLKFVTLHNLEHSMGMHSYDLGMNHLGDMTSEEVISL 100

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+  R +     SN+   +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 101 MSSLRVPSQWPRNVTYKSNSNQK--LPDSVDWREKGCVTKVKYQGACGACWAFSAVGALE 158

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  E  YPYK  
Sbjct: 159 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAT 218

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N     S ++ LP   E  LK  +A  GP++V+I+A   +F LY SG+Y D
Sbjct: 219 DGKCRYDSKNRAATCSKYTELPSGSEDDLKEAVANKGPVSVAIDARHSSFFLYRSGVYYD 278

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R + N CGIA+Y  Y
Sbjct: 279 PSCTQN-VNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSY 337

Query: 307 ALI 309
             I
Sbjct: 338 PEI 340


>gi|387915678|gb|AFK11448.1| cathepsin L1 [Callorhinchus milii]
          Length = 336

 Score =  202 bits (514), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/298 (36%), Positives = 159/298 (53%), Gaps = 8/298 (2%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           ++Y +K  DS ++  W+ N K I  HN     G H + L  N   D+    + + M    
Sbjct: 40  REYMQKE-DSYRRAVWEKNLKTIQLHNLGYSMGKHSFDLAMNQFGDMTTEEFHQLMNGFQ 98

Query: 79  HSRIRRTLVRSPESN--ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
                        S   +S+ +P  +DWR+KG++TP  NQ  CG+C+AFS   A++GQ F
Sbjct: 99  QPDTEHLTSTKDVSTRPKSLKLPGSVDWRDKGYVTPVKNQGACGSCWAFSSTGALEGQTF 158

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K T ++  LS Q +VDCS   GN GC GG +     Y+Q   G+  E  YPY  K+  C 
Sbjct: 159 KKTGKLIPLSEQNLVDCSQKQGNHGCNGGMMDRAFTYIQQNNGIDTEASYPYTAKEHPCN 218

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +   +       +      DE AL  T+AT+GPI+V+I+A   +FQ Y SGIY +  C S
Sbjct: 219 YDPRHNAATCHGYRYSEQYDEMALAETVATIGPISVAIDAKHISFQFYKSGIYQEPRCQS 278

Query: 257 DYVNHAMLLVGYT----RNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
             +NHA+L+VGY      N WI+KN +   WG+ GY+++ K  NN CGIA+Y  Y L+
Sbjct: 279 YNINHAVLVVGYNSQGGNNYWIVKNSFGSRWGNKGYIWMPKDKNNHCGIASYPTYPLV 336


>gi|118136313|gb|ABK62794.1| cathepsin L-like cysteine protease [Neobenedenia melleni]
 gi|118136315|gb|ABK62795.1| cathepsin L-like cysteine protease [Neobenedenia melleni]
          Length = 335

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 170/306 (55%), Gaps = 15/306 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY--IKE 73
           KY+KDY     +  K L W  N + +  HN+   QG   YTL  NH++DL    +  +  
Sbjct: 33  KYQKDYLSSEDELNKLLTWSKNLETVRKHNELYAQGKKSYTLAMNHMADLSSEEFKALYL 92

Query: 74  MTRLTHSRIRRTLVRSPESNESVLI----PDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           + +   +++ R   +   + E   I    P  +DW  KG +T   NQ  CG+C+AFS   
Sbjct: 93  VPKFDATKVPR---KGKAAGEHRQIKNDPPSEIDWVRKGHVTAVKNQAQCGSCWAFSSTG 149

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           +I+G + ++T ++   S QQ+VDCS   GN GC GG + N+ NY+    GL  E  YPY+
Sbjct: 150 SIEGAVKRATGKLISFSEQQLVDCSTAFGNHGCNGGIMDNSFNYLIHNKGLESEASYPYE 209

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            ++  C++K+      ISS++ +   DE  LK  +  VGP++++I+AS  +F LY SG+Y
Sbjct: 210 AQKKECRYKKALSKGTISSFTDVSQFDEKDLKRAVGLVGPVSIAIDASQFSFHLYDSGVY 269

Query: 250 DDEACTSDYVNHAMLLVGYTR-----NSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           D+E C+   +NH +L VGY       + W +KN W++ WG  GY+ + R  +N+CG+A  
Sbjct: 270 DEEDCSQTMLNHGVLAVGYGTTPEGLDYWKVKNSWTNTWGMEGYILMSRNKDNQCGVATV 329

Query: 304 AVYALI 309
           A Y ++
Sbjct: 330 ASYPIV 335


>gi|62510452|sp|Q8HY81.1|CATS_CANFA RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497538|gb|AAO13009.1| cathepsin S preproprotein [Canis lupus familiaris]
          Length = 331

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 168/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y+++  +  ++L W+ N K +  HN E   G+H Y L  NHL D+     I  
Sbjct: 32  KKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L   S+ +R +     SN+   +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MGSLRVPSQWQRNVTYRSNSNQK--LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  E  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAM 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E ALK  +A  GP++V+I+AS ++F LY SG+Y +
Sbjct: 210 NGKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R + N CGIA+Y  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|354504701|ref|XP_003514412.1| PREDICTED: cathepsin R-like [Cricetulus griseus]
 gi|344245862|gb|EGW01966.1| Cathepsin R [Cricetulus griseus]
          Length = 333

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/305 (36%), Positives = 169/305 (55%), Gaps = 13/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y ++  + +K+  W+ N K I   + E   G++ +T+  N   DL      K 
Sbjct: 33  KKSYDKTYSQE-EERQKRAVWEDNVKMIKLLSMENGLGMNNFTVEMNEFGDLTGEEMKKM 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           MT  +   +R    +  +    V IP  LDWR +G++ P   Q  CGAC+AF++A++I+ 
Sbjct: 92  MTDSSVLTLRNG--KHMQRLGDVKIPKTLDWRTQGYVGPVRKQNGCGACWAFAVAASIES 149

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+FK T ++ +LS+Q ++DC+      GC GG +     YV+   GL  E  YPY+ K+ 
Sbjct: 150 QLFKKTGKMTQLSVQNLIDCARSYSTYGCKGGLVYGAFLYVKNNKGLEAEATYPYEAKEG 209

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+++    VV I+ + V+ P++E AL   L T GPIAV I+A   +F  YA GIY +  
Sbjct: 210 RCRYRAERSVVKITRFLVV-PRNEEALMNALVTHGPIAVGIDAGHESFTNYAGGIYHEPK 268

Query: 254 CTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           C +D   H +LLVG+         +  W+LKN     WG+NGYM L R  NN CGIA+YA
Sbjct: 269 CKTDNPTHGLLLVGFGYEGRESDGKKYWLLKNSHGEKWGENGYMKLPRDQNNYCGIASYA 328

Query: 305 VYALI 309
           +Y ++
Sbjct: 329 MYPIL 333


>gi|395856029|ref|XP_003800445.1| PREDICTED: cathepsin S [Otolemur garnettii]
          Length = 331

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/303 (37%), Positives = 167/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y +K  +++++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYTEKNEETERRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVVSL 91

Query: 74  MTRLTHSR-IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           MT L   R  +R +      N+   +PD LDWREKG +T    Q  CG+C+AFS   A++
Sbjct: 92  MTCLKVPRQSQRNVTYKSSPNQK--LPDSLDWREKGCVTEVKYQGSCGSCWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+  +T ++  LS Q +VDCS     N GC GG +     Y+    G+  E  YPYK  
Sbjct: 150 AQLKLTTGKLVSLSAQNLVDCSTEKYRNEGCHGGFMTEAFQYIIDNNGIDSEASYPYKAM 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N     S ++ LP   E ALK  +A+ GP++V+I+AS  +F LY SG+Y +
Sbjct: 210 DEKCQYDSKNRAATCSKYTELPFGSEEALKEAVASKGPVSVAIDASHSSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            ACT   VNH +L+VGY      + W++KN W  ++GD GY+ + R   N CGIA+Y+ Y
Sbjct: 270 PACT-QVVNHGVLVVGYGNLNGNDYWLVKNSWGLYFGDKGYIRMARNRENHCGIASYSSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|195382749|ref|XP_002050091.1| GJ20385 [Drosophila virilis]
 gi|194144888|gb|EDW61284.1| GJ20385 [Drosophila virilis]
          Length = 370

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 159/300 (53%), Gaps = 10/300 (3%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A    ++  + +    +   N   + G   Y L  N  +DL    ++K++T L 
Sbjct: 72  KSYLSAADRQLREGIFSARKTLVEAKNAAFKSGASTYELAVNAFADLTNAEFLKQLTGLR 131

Query: 79  HSRIRRTLVRS----PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            S       ++    P+   +V +PD  DWREKG +TP   Q +CG+C++F+   AI+G 
Sbjct: 132 KSLSGEQRAKAHRIAPKLATNVPLPDSFDWREKGGVTPVKFQGECGSCWSFAATGAIEGH 191

Query: 135 IFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           +F+ T ++  LS Q +VDC  +  G  GC GG      N++    G+   E YPY  K+ 
Sbjct: 192 VFRKTGKLPNLSEQNLVDCGTVDLGLAGCDGGFQEYAFNFITEQNGIAAGEKYPYVDKKD 251

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            CK+K       I+ ++ +PP+DE A+K  +AT GP+A S+N    +  LY  GIY DE 
Sbjct: 252 TCKYKNDISGAQITGFAAIPPKDEQAMKTVVATQGPLACSVNGL-ESLLLYKRGIYADEE 310

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           C    VNH++L+VGY     ++ WI+KN W   WG++GY  L RG N CGIA+   Y ++
Sbjct: 311 CNKGEVNHSILVVGYGTEDGQDYWIVKNSWDKAWGEDGYFRLPRGKNFCGIASECSYPVV 370


>gi|28194647|gb|AAO33585.1|AF479267_1 cathepsin L [Mesocricetus auratus]
          Length = 333

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/286 (39%), Positives = 156/286 (54%), Gaps = 14/286 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVRSPES 92
           W+ N K I  HN E  +G HG+T+  N   D+    + + +    H + R+  L + P  
Sbjct: 52  WEKNMKMIELHNGEYSEGKHGFTMEMNAFGDMTNEEFRQLVNGYKHQKHRKGKLFQEPLM 111

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
              + +P  +DWREKG +TP  NQ  CG+C+AFS   A++GQ+   T  +  LS Q +VD
Sbjct: 112 ---LQLPKSVDWREKGCVTPVKNQGQCGSCWAFSACGALEGQMCLKTGVLVSLSEQNLVD 168

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +     YV    GL  EE YPY+ K   CK+K P       +  V 
Sbjct: 169 CSRGEGNQGCNGGLMDFAFQYVLNNKGLDSEESYPYEAKDGTCKYK-PEFAAANDTGYVD 227

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY---- 268
            PQ E AL   +ATVGPIAV+I+AS  +FQ Y+SGIY +  C+S  ++H +L++GY    
Sbjct: 228 IPQLEKALMKAVATVGPIAVAIDASHPSFQFYSSGIYFEPNCSSKDLDHGVLVIGYGFEG 287

Query: 269 ----TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                +  WI+KN W   WG  G+ ++ K  NN CGIA  A Y  +
Sbjct: 288 TDSNKKKYWIVKNSWGTGWGMGGFFHIAKDKNNHCGIATAASYPTV 333


>gi|344271925|ref|XP_003407787.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 333

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/304 (38%), Positives = 164/304 (53%), Gaps = 17/304 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           YKK Y     D ++ + W+ N K I  HNQE  QG HG+T+  N   D     + + M  
Sbjct: 36  YKKVYAVNEEDWRRAV-WEKNMKMIERHNQEYSQGKHGFTMAMNAFGDKTNEEFRQLMNG 94

Query: 77  LTHSRIRR-TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
               + ++  L   P       IP  +DW +KG++TP  +Q  CG+C+AFS   A++GQ+
Sbjct: 95  FQSQKHKKGKLFYEPVFGH---IPTSVDWTQKGYVTPVKDQGQCGSCWAFSATGALEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI- 194
           F+ T ++  LS Q +VDCS   GN GC GG + N   YV+  GGL  EE YPY    +  
Sbjct: 152 FRKTGKLVSLSEQNLVDCSWREGNEGCNGGLMDNAFQYVKDNGGLDSEESYPYTATDTQD 211

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C++       + + +  +PPQ E AL   +ATVGPI+V+I+A   +FQ Y+SGIY D AC
Sbjct: 212 CRYNPKYSAANDTGFVDIPPQ-EKALMKAVATVGPISVAIDAGQVSFQFYSSGIYFDPAC 270

Query: 255 TSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAV 305
               VNH +L VGY            W++KN W   WG +GY+ + K  NN CGIA  A 
Sbjct: 271 RLT-VNHGVLAVGYGFEGTDPDKNKYWLVKNSWGKSWGADGYIKIAKDRNNHCGIARAAS 329

Query: 306 YALI 309
           Y  +
Sbjct: 330 YPTV 333


>gi|12805315|gb|AAH02125.1| Ctss protein [Mus musculus]
          Length = 340

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/304 (37%), Positives = 167/304 (54%), Gaps = 11/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K+Y+ K  +  ++L W+ N K I  HN E   G+H Y +  N + D+     +  
Sbjct: 40  KKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEILCR 99

Query: 74  MTRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L   R   +T+     SN +  +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 100 MGALRIPRQSPKTVTFRSYSNRT--LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALE 157

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           GQ+   T ++  LS Q +VDCS     GN GC GG +     Y+   GG+  +  YPYK 
Sbjct: 158 GQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKA 217

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +   N     S +  LP  DE ALK  +AT GP++V I+AS  +F  Y SG+YD
Sbjct: 218 MDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYD 277

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
           D +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R N N CGIA+   
Sbjct: 278 DPSCTGN-VNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASDCS 336

Query: 306 YALI 309
           Y  I
Sbjct: 337 YPEI 340


>gi|301609080|ref|XP_002934105.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 334

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 167/301 (55%), Gaps = 7/301 (2%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           K ++K Y+    +  ++  W+ + K I  HN E   GLH Y +  NHL D+        M
Sbjct: 35  KTHQKSYKDAEEERARRTIWEESLKFITVHNLEYSLGLHTYEVGMNHLGDMTGEEVAATM 94

Query: 75  TRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           T  T S      +V  P+       P   DWR KG +TP  +Q  CG+CYAF    A++ 
Sbjct: 95  TGYTDSGDSLDNVVHVPKEILEAQPPASKDWRTKGCVTPVRSQGSCGSCYAFGAVGALEC 154

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q  + T  +   S Q++VDCS   GN GC GG    +  Y++  G +M+E  YPY GK++
Sbjct: 155 QWKRKTGRLVTFSPQELVDCSYTVGNNGCKGGGSNASFTYMKKYG-VMEESAYPYTGKEA 213

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            CK ++P+ V  +  +  LP  +E  LK  + TVGP+ V+I++S   F++Y SG+Y D  
Sbjct: 214 QCKKEKPSNVGVVKQFYRLPTGNEVLLKKAVGTVGPVYVAIDSSRQGFRMYKSGVYYDPY 273

Query: 254 CTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           C++  ++HA+L+VGY++ +    W++KN W  ++GD GY+ + R  NN CGIA  A Y +
Sbjct: 274 CSTTSLSHAVLIVGYSKENGQYYWLVKNSWGEYFGDKGYIKMARKRNNHCGIATRAAYPV 333

Query: 309 I 309
           +
Sbjct: 334 V 334


>gi|170041165|ref|XP_001848344.1| cathepsin l [Culex quinquefasciatus]
 gi|167864709|gb|EDS28092.1| cathepsin l [Culex quinquefasciatus]
          Length = 340

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 175/323 (54%), Gaps = 18/323 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW    +  +KKY  +  ++    + K++ Q+ HK I  HNQ  +QG   + LR N
Sbjct: 22  LVKEEWNAYKLQHRKKYDSETEERL---RLKIYVQNKHK-IAKHNQRFEQGQEKFRLRVN 77

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITP 112
             +DL    +++ +     +  ++ +++  + +E V         +P  +DWREKG +TP
Sbjct: 78  KYTDLLHEEFVQTLNGFNRTNAKKPMLKGVKIDEPVTYIEPANVEVPKTVDWREKGAVTP 137

Query: 113 DWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLN 172
             +Q  CG+C++FS   A++GQ F+ T ++  LS Q +VDCS   GN GC GG +     
Sbjct: 138 VKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKYGNNGCNGGMMDFAFQ 197

Query: 173 YVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAV 232
           Y++  GG+  E+ YPY+     C +    +      +  +P  DE AL   +AT GP++V
Sbjct: 198 YIKDNGGIDTEKAYPYEAIDDTCHYNPKAVGATDKGFVDIPQGDEKALMKAIATAGPVSV 257

Query: 233 SINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNG 287
           +I+AS  +FQ Y+ G+Y +  C S+ ++H +L VGY       + W++KN W   WGD G
Sbjct: 258 AIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQG 317

Query: 288 YMYLKRG-NNRCGIANYAVYALI 309
           Y+ + R  +N CGIA  A Y L+
Sbjct: 318 YVKMARNRDNHCGIATAASYPLV 340


>gi|81294188|gb|AAI08032.1| Cathepsin L, 1 b [Danio rerio]
          Length = 336

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 164/292 (56%), Gaps = 14/292 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    + + M   TH   + +  + 
Sbjct: 47  RRMIWEENLRKIEQHNFEYSYGNHTFKMGMNQFGDMTNEEFRQAMNGYTHDPNQTS--QG 104

Query: 90  PESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
           P   E      P  +DWR++G++TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S 
Sbjct: 105 PLFMEPSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSE 164

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDI 206
           Q +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V  I
Sbjct: 165 QNLVDCSRPQGNQGCNGGLMDLAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKI 224

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + AC+S  ++HA+L+V
Sbjct: 225 TGFVDIPSGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACSSSRLDHAVLVV 284

Query: 267 GYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY            WI+KN WS  WGD GY+Y+ K  NN CG+A  A Y L+
Sbjct: 285 GYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGVATKASYPLM 336


>gi|354622947|ref|NP_001002938.2| cathepsin S precursor [Canis lupus familiaris]
          Length = 339

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 168/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y+++  +  ++L W+ N K +  HN E   G+H Y L  NHL D+     I  
Sbjct: 40  KKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISL 99

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L   S+ +R +     SN+   +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 100 MGSLRVPSQWQRNVTYRSNSNQK--LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 157

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  E  YPYK  
Sbjct: 158 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAM 217

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E ALK  +A  GP++V+I+AS ++F LY SG+Y +
Sbjct: 218 NGKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYE 277

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R + N CGIA+Y  Y
Sbjct: 278 PSCTQN-VNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSY 336

Query: 307 ALI 309
             I
Sbjct: 337 PEI 339


>gi|148224682|ref|NP_001086670.1| cathepsin S [Xenopus laevis]
 gi|50418223|gb|AAH77285.1| Ctss-prov protein [Xenopus laevis]
          Length = 320

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/304 (35%), Positives = 161/304 (52%), Gaps = 9/304 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K+Y  ++ D  +++ W+ N   ++ HN E   G+H Y L  NHL+D+       +
Sbjct: 18  KNKHTKEYEDESEDLLRRITWEKNLNTVNMHNLEYSMGMHTYELGMNHLADMTSEEIKSK 77

Query: 74  MTRLT---HSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           MT L    HS  + T      S     +PD +DWREKG ++   NQ  CG+C+AFS   A
Sbjct: 78  MTGLILPPHSERKATFSSQKNSTLGGKVPDSIDWREKGCVSEVKNQGGCGSCWAFSAVGA 137

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+   T +I  LS Q +VDCS   GN GC+GG +     YV    G+  +  YPY  
Sbjct: 138 LEGQLMLKTGKIVSLSPQNLVDCSSKYGNKGCSGGFMTRAFQYVIDNNGIDSDTYYPYHA 197

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C ++          +  + P  E  LK  L  +GPI+V+I+ +  TF LY SG+Y 
Sbjct: 198 MDEKCHYELAGKASSCVKYREIVPGTEDNLKQALGNIGPISVAIDGTRPTFFLYKSGVYS 257

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D +C+ + VNH +L VGY     ++ W+LKN W   +GD GY+ + R   N CG+A+Y  
Sbjct: 258 DPSCSQE-VNHGVLAVGYGTLNGQDFWLLKNSWGTKYGDQGYVRIARNKENLCGVASYTS 316

Query: 306 YALI 309
           Y  I
Sbjct: 317 YPEI 320


>gi|427797099|gb|JAA64001.1| Putative cathepsin l cathepsin l, partial [Rhipicephalus
           pulchellus]
          Length = 331

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 171/321 (53%), Gaps = 19/321 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLH-WQSNHKKIHTHNQEAQQGLHGYTLRE 59
           +   EW        K+Y+ D     T+   +L  +  N  KI  HN++  +    Y L  
Sbjct: 18  LVGAEWSAFKALHGKEYESD-----TEEYYRLKIYMENRLKIARHNEKYAKSQVSYKLAM 72

Query: 60  NHLSDLHPRHYIKEMTRLTHSRIRRTLVRS------PESNESVLIPDHLDWREKGFITPD 113
           N   D+    ++   TR    R  R   R       PE  E   +P  +DWR+KG +TP 
Sbjct: 73  NEFGDMLHHEFVS--TRNGFKRNYRDTPREGSFFVEPEGLEDFHLPKTVDWRKKGAVTPV 130

Query: 114 WNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNY 173
            NQ  CG+C++FS   +++GQ F+   ++  LS Q ++DCS   GN GC GG +     Y
Sbjct: 131 KNQGQCGSCWSFSTTGSLEGQHFRKLHKLVSLSEQNLIDCSRSFGNNGCEGGLMDYAFKY 190

Query: 174 VQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVS 233
           ++   G+  E+ YPY     +C F +  +    + +  +P  DE+ LK  +ATVGP++V+
Sbjct: 191 IKANKGIDTEQSYPYNATDGVCHFNKSAVGATDTGFVDIPEGDENKLKKAVATVGPVSVA 250

Query: 234 INASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYM 289
           I+AS  +FQ Y+ G+YD+  C S+ ++H +L+VGY     ++ W++KN W   WGD GY+
Sbjct: 251 IDASHESFQFYSEGVYDEPECDSEQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDGGYI 310

Query: 290 YLKRG-NNRCGIANYAVYALI 309
           Y+ R  +N+CGIA+ A Y L+
Sbjct: 311 YMSRNKDNQCGIASAASYPLV 331


>gi|151573014|gb|ABS17682.1| cathepsin L-1 [Artemia salina]
          Length = 334

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 166/303 (54%), Gaps = 12/303 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK+Y  +  +  +   +  N  K+  HN   ++G   Y +  N   DL    +   M  
Sbjct: 34  HKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYHVAMNKFGDLLHHEFRSIMNG 93

Query: 77  LTH-----SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
             H     SR   T      +N  V +P+ +DWREKG ITP  +Q  CG+C+AFS   A+
Sbjct: 94  YQHKKQNSSRAESTFTFMEPAN--VTVPESVDWREKGAITPVKDQGQCGSCWAFSSTGAL 151

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F+ T ++  LS Q ++DCS   GN GC GG +     Y++   G+  E  YPY+ +
Sbjct: 152 EGQTFRKTGKLVSLSEQNLIDCSGKYGNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAE 211

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
             +C++   N       +  +P  +E  LK  +ATVGP++V+I+AS  +FQ Y+ G+Y +
Sbjct: 212 DDVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYE 271

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +C SD ++H +L+VGY     ++ W++KN WS HWGD GY+ + R   N CG+A+ A Y
Sbjct: 272 PSCDSDDLDHGVLVVGYGSDNGKDYWLVKNSWSEHWGDEGYIKMARNRKNHCGVASAASY 331

Query: 307 ALI 309
            L+
Sbjct: 332 PLV 334


>gi|84660246|emb|CAI43320.1| cathepsin L [Lubomirskia baicalensis]
 gi|85677150|emb|CAI46307.1| cathepsin L [Lubomirskia baicalensis]
          Length = 327

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/312 (37%), Positives = 173/312 (55%), Gaps = 14/312 (4%)

Query: 10  FIFPQK--KYKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           F FP++   +KK++ K     +++L     WQ+N K +  HN  A++   G+T+  N  +
Sbjct: 16  FDFPEEWESWKKEHGKVYNSDREELTRHIIWQANRKYVDEHNAHAEK--FGFTVGMNQFA 73

Query: 64  DLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACY 123
           DL    + +      +    +       S +   +P  +DWR KGF+T   NQ  CG+C+
Sbjct: 74  DLESSEFGRLYNGYNNKPSMKKAQSKVFSTKVGDLPTSVDWRTKGFVTAIKNQGQCGSCW 133

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKE 183
           AFS  + ++GQ F +T  +  LS Q +VDCS   GN GC GG + N   YV   GG+  E
Sbjct: 134 AFSAVAGLEGQHFNATGTLVSLSEQNLVDCSTAEGNQGCNGGLMDNAFQYVIKNGGIDTE 193

Query: 184 EDYPYKGKQSICKFKRPNIVVDISSWS-VLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
             YPYK     CKF   N+    S +S +LP + E AL+V +A VGPI+V+I+AS  +FQ
Sbjct: 194 ASYPYKAVDQKCKFNAANVGSTCSGFSDILPHKSEAALQVAVAVVGPISVAIDASHTSFQ 253

Query: 243 LYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNR 297
           LY SG+Y + AC+   ++H +  VGY  +S    WI+KN W   WG  GY+++ R  NN+
Sbjct: 254 LYKSGVYSESACSQTSLDHGVTAVGYDSSSGVAYWIVKNSWGTTWGQAGYIWMSRNKNNQ 313

Query: 298 CGIANYAVYALI 309
           CGIA  A Y ++
Sbjct: 314 CGIATAASYPIV 325


>gi|387015022|gb|AFJ49630.1| Cathepsin L1-like [Crotalus adamanteus]
          Length = 338

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/292 (36%), Positives = 161/292 (55%), Gaps = 12/292 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N K I  HN +   G H Y L  NH  D+    + + M     SR +R    S
Sbjct: 47  RRMIWEKNLKMIELHNLDHSLGKHSYRLGMNHFGDMTNEEFRQVMNGFKQSRSQRKYKGS 106

Query: 90  PESNESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
                + L  P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ F+ T ++  LS Q
Sbjct: 107 QFLEPNFLQAPKSVDWREKGYVTPVKDQGQCGSCWAFSATGALEGQHFRKTGKLVSLSEQ 166

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-ICKFKRPNIVVDIS 207
            ++DCS   GN GC GG +     Y++   G+  EE YPY GK    C +K      + +
Sbjct: 167 NLIDCSGPEGNQGCNGGLMDQAFQYIKDNNGIDSEESYPYIGKDDEDCLYKPEYNSANDT 226

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
            +  +P   E AL   +A VGPI+V+I+AS  +FQ Y SG+Y +  C S+ ++H +L+VG
Sbjct: 227 GFVDIPEGRERALMKAVAAVGPISVAIDASHTSFQFYESGVYYEPQCNSEELDHGVLVVG 286

Query: 268 Y---------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           Y          +  WI+KN WS  WGD GY+++ K  +N CGIA+ A Y ++
Sbjct: 287 YGYEGTDDDNKKRYWIVKNSWSEKWGDQGYIHMAKDRSNNCGIASAASYPMV 338


>gi|208972992|dbj|BAG74345.1| silicatein-M4 [Ephydatia fluviatilis]
 gi|296168739|emb|CAQ54047.1| silicatein alpha 3 [Ephydatia muelleri]
          Length = 327

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 9/298 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +++ Y  +  + ++   W +N K I  HN  A   L GYTL  N   DL    + +    
Sbjct: 34  HQRSYESQLQEMERHAIWVANKKYIEHHNANAD--LFGYTLAMNGFGDLTSAEFTERF-- 89

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           LTH R  R+ +++ E+ + V   D +DWR +G +T   +Q  CG+ YAF+ A A++G   
Sbjct: 90  LTHKRSERSGLQTFEAPKGVTYADSMDWRTRGAVTSVQSQGSCGSSYAFAAAGALEGANA 149

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
            +  ++  LS Q ++DCS+  GN GC+GG +     YV   GG+  +  YPYKGKQ  C+
Sbjct: 150 LAADKLVALSEQNIIDCSVAYGNHGCSGGDVYTAFKYVVDNGGIDTDSSYPYKGKQYSCQ 209

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +   N+    +    +    E  L   +A+VGPIAV+++A+ ++F  Y SG++D  +C++
Sbjct: 210 YNSKNLGAVATGVVKITSGSETDLLSAVASVGPIAVAVDATVNSFMFYQSGVFDSSSCST 269

Query: 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
             +NHAML+ GY     ++ W++KN W   WG++GY+ + R   N+CGIA+ A+Y ++
Sbjct: 270 TKLNHAMLVTGYGSTNGKDYWLVKNSWGTGWGESGYIKMVRNKYNQCGIASDALYPML 327


>gi|66394764|gb|AAY46196.1| cathepsin L-like cysteine proteinase [Globodera pallida]
          Length = 379

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 173/307 (56%), Gaps = 9/307 (2%)

Query: 12  FPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           + QK  +K Y  +  ++++ L + S  + I  HNQ   +G   + + ENH++DL    Y 
Sbjct: 73  YKQKHGRKAYADQDVENERMLTYLSAKQFIDKHNQAYIEGKVTFRVGENHIADLPFSEYK 132

Query: 72  K--EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           K     RL    +RR             +P+ +DWR+KG++T   NQ  CG+C+AFS   
Sbjct: 133 KLNGYRRLLGDNLRRNASTFLAPMNVGDLPESVDWRDKGWVTEVKNQGMCGSCWAFSSTG 192

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++ Q  + T ++  LS Q ++DCS   GN+GC GG + N   Y++   G+ KE DYPYK
Sbjct: 193 ALEAQHARQTGQLISLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNNGVDKELDYPYK 252

Query: 190 GKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            K    C FKR ++    + +  +   DE  LK+ +AT GP +V+I+A   +FQLY  G+
Sbjct: 253 AKTGKKCLFKRNDVGATDTGFFDIAEGDEEKLKIAVATQGPASVAIDAGHRSFQLYTHGV 312

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           Y ++ C+ + ++H +L+VGY  ++     WI+KN W  HWG+ GY+ + R   N CGIA+
Sbjct: 313 YFEKECSPENLDHGVLVVGYGTDAQQGDYWIVKNSWGAHWGEQGYIRMARNRKNNCGIAS 372

Query: 303 YAVYALI 309
           +A Y L+
Sbjct: 373 HASYPLV 379


>gi|405958751|gb|EKC24845.1| Cathepsin L [Crassostrea gigas]
          Length = 330

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 169/314 (53%), Gaps = 14/314 (4%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           + EW +      K+Y  +      ++++++ W+ N   I  HN  A +G + + L  N  
Sbjct: 24  DSEWQLYLKAHGKQYGAE-----EEARRRVIWEGNLDYIEKHNLAADRGDYSFWLGMNEY 78

Query: 63  SDLHPRHYIKEMT--RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCG 120
            D+    +   M   ++ +   R +L   P SN   L PD +DWR KG++TP  NQ  CG
Sbjct: 79  GDMTNEEFRSTMNGYKMRNGTSRGSLYLPP-SNIGDL-PDTVDWRPKGYVTPIKNQGQCG 136

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C++FS   +++GQ FK T ++  LS Q +VDCS   GN GC GG + +   Y++   G+
Sbjct: 137 SCWSFSATGSLEGQTFKKTGKLPSLSEQNLVDCSQKQGNHGCQGGLMDDAFQYIKDNNGI 196

Query: 181 MKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
             E  YPY+ K   C+F   N+    S ++ +  + E  L+  +ATVGPIAV+I+AS  +
Sbjct: 197 DTESSYPYEAKNGKCRFNAANVGATDSGFTDIKSKSESDLQSAVATVGPIAVAIDASHMS 256

Query: 241 FQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGN- 295
           FQLY SG+Y +  C+   ++H +L VGY   S    W++KN W   WG  GY+ + R   
Sbjct: 257 FQLYKSGVYHEFFCSETRLDHGVLAVGYGTESGKDYWLVKNSWGESWGQKGYIMMSRNKR 316

Query: 296 NRCGIANYAVYALI 309
           N CGIA  A Y  +
Sbjct: 317 NNCGIATSASYPTV 330


>gi|308474437|ref|XP_003099440.1| CRE-CPL-1 protein [Caenorhabditis remanei]
 gi|308266846|gb|EFP10799.1| CRE-CPL-1 protein [Caenorhabditis remanei]
          Length = 337

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/305 (36%), Positives = 171/305 (56%), Gaps = 14/305 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQS---NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           YK+DY K  T   ++++ ++   N   I  HN++ + G   + +  NH++DL    Y K 
Sbjct: 35  YKEDYEKDYTGDDEQVYMEAFVKNVIHIDNHNRDHRLGRKTFEMGLNHIADLPFSQYRKL 94

Query: 73  -EMTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
               RL   SRI+ +       N  V +PD +DWR+   +T   NQ  CG+C+AFS   A
Sbjct: 95  NGYRRLYGDSRIKNSSSFLAPFN--VQVPDEVDWRDTHLVTDVKNQGMCGSCWAFSATGA 152

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ  +   ++  LS Q +VDCS   GN GC GG +     Y++   G+  E+ YPYKG
Sbjct: 153 LEGQHARKLGKLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHGVDTEDSYPYKG 212

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C F + ++  D   ++ LP  DE  LK+ +AT GPI+++I+A   +FQLY  G+Y 
Sbjct: 213 RDMKCHFSKKDVGADDKGYTDLPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGVYY 272

Query: 251 DEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           DE C+S+ ++H +LLVGY  +      W++KN W   WG+ GY+ + R  NN CG+A  A
Sbjct: 273 DEECSSEELDHGVLLVGYGTDPEHGDYWLVKNSWGTGWGEKGYIRIARNRNNHCGVATKA 332

Query: 305 VYALI 309
            Y L+
Sbjct: 333 SYPLV 337


>gi|109940313|sp|P25975.3|CATL1_BOVIN RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|74354943|gb|AAI02313.1| CTSL2 protein [Bos taurus]
 gi|154425700|gb|AAI51426.1| Cathepsin L2 [Bos taurus]
 gi|296484466|tpg|DAA26581.1| TPA: cathepsin L2 precursor [Bos taurus]
 gi|440898893|gb|ELR50299.1| Cathepsin L1 [Bos grunniens mutus]
          Length = 334

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 110/290 (37%), Positives = 157/290 (54%), Gaps = 13/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVR 88
           ++  W+ N K I  HNQE  +G HG+ +  N   D+    + + M    + + ++  L  
Sbjct: 48  RRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFH 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     V +P  +DW +KG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLL---VDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG + N   Y++  GGL  EE YPY    +     +P       +
Sbjct: 165 NLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDT 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  PQ E AL   +ATVGPI+V+I+A   +FQ Y SGIY D  C+S  ++H +L+VGY
Sbjct: 225 GFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGY 284

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       WI+KN W   WG NGY+ + K  NN CGIA  A Y  +
Sbjct: 285 GFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|332375975|gb|AEE63128.1| unknown [Dendroctonus ponderosae]
          Length = 338

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 171/309 (55%), Gaps = 18/309 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           ++KK Y  +  +  +   +  N  K+  HN+  +QGL+ Y L  N   DL    ++  + 
Sbjct: 33  QHKKQYESETEERFRMKIFMDNSHKVAKHNKLFEQGLYPYKLAMNKYGDLLHHEFVGLLN 92

Query: 76  RLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDWNQEDCGACYAFSI 127
               ++   T ++  E  +S+         IPD +DWR++G +TP  +Q  CG+C++FS 
Sbjct: 93  GFNRTK---TYLKRGELQDSITFIEPAHVDIPDTVDWRQEGAVTPVKDQGHCGSCWSFSA 149

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++GQ F+ T ++  LS Q +VDCS   GN GC GG + N   Y++  GG+  E  YP
Sbjct: 150 TGALEGQHFRQTKKLVSLSEQNLVDCSSRFGNNGCNGGLMDNAFRYIKNNGGIDTEAAYP 209

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y G+    ++   N       +  +P  DE  LK  +ATVGPI+++I+AS  +FQLY++G
Sbjct: 210 YMGEDEKFRYSAKNRGATDKGFVDIPSGDEDKLKAAVATVGPISIAIDASHESFQLYSNG 269

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS------WILKNWWSHHWGDNGYMYLKRG-NNRCGI 300
           +Y D  C+S  ++H +L+VGY  +       W++KN W   WG +GY+ + R  +N+CG+
Sbjct: 270 VYSDPTCSSTELDHGVLVVGYGTDEKTGMDYWLVKNSWGDTWGLDGYIKMARNQDNQCGV 329

Query: 301 ANYAVYALI 309
           A  A Y L+
Sbjct: 330 ATQASYPLV 338


>gi|8393221|ref|NP_059016.1| cathepsin S preproprotein [Rattus norvegicus]
 gi|399190|sp|Q02765.1|CATS_RAT RecName: Full=Cathepsin S; Flags: Precursor
 gi|203650|gb|AAA40994.1| cathepsin S precursor [Rattus norvegicus]
          Length = 330

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 169/307 (55%), Gaps = 19/307 (6%)

Query: 17  YKKDYRKKATDSK----KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK 72
           +KK   ++ TD      ++L W+ N K I  HN E   G+H Y++  NH+ D+ P   I 
Sbjct: 29  WKKTRMRRNTDQNEEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEVIG 88

Query: 73  EMTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
            M  L   RI R   RS   +S+ +  +PD +DWREKG +T    Q  CG+C+AFS   A
Sbjct: 89  YMGSL---RIPRPWNRSGTLKSSSNQTLPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGA 145

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
           ++GQ+   T ++  LS Q +VDCS     GN GC GG +     Y+     +  E  YPY
Sbjct: 146 LEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYI-IDTSIDSEASYPY 204

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH-TFQLYASG 247
           K     C +   N     S +  LP  DE ALK  +AT GP++V I+ + H +F LY SG
Sbjct: 205 KAMDEKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSG 264

Query: 248 IYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIAN 302
           +YDD +CT + +NH +L+VGY     ++ W++KN W  H+GD GY+ + R N N CGIA+
Sbjct: 265 VYDDPSCTEN-MNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIAS 323

Query: 303 YAVYALI 309
           Y  Y  I
Sbjct: 324 YCSYPEI 330


>gi|66377984|gb|AAY45869.1| cathepsin L-like cysteine proteinase [Globodera pallida]
          Length = 379

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 173/307 (56%), Gaps = 9/307 (2%)

Query: 12  FPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           + QK  +K Y  +  ++++ L + S  + I  HNQ   +G   + + ENH++DL    Y 
Sbjct: 73  YKQKHGRKSYADQDVENERMLTYLSAKQFIDKHNQAYIEGKVTFRVGENHIADLPFSEYK 132

Query: 72  K--EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           K     RL    +RR             +P+ +DWR+KG++T   NQ  CG+C+AFS   
Sbjct: 133 KLNGYRRLLGDNLRRNASTFLAPINIGDLPESVDWRDKGWVTEVKNQGMCGSCWAFSSTG 192

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++ Q  + T ++  LS Q ++DCS   GN+GC GG + N   Y++   G+ KE DYPYK
Sbjct: 193 ALEAQHARQTGQLISLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNNGVDKELDYPYK 252

Query: 190 GKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            K    C FKR ++    + +  +   DE  LK+ +AT GP +V+I+A   +FQLY  G+
Sbjct: 253 AKTGKKCLFKRNDVGATDTGFFDIAEGDEEKLKIAVATQGPASVAIDAGHRSFQLYTHGV 312

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           Y ++ C+ + ++H +L+VGY  ++     WI+KN W  HWG+ GY+ + R   N CGIA+
Sbjct: 313 YFEKECSPENLDHGVLVVGYGTDAQQGDYWIVKNSWGAHWGEQGYIRMARNRKNNCGIAS 372

Query: 303 YAVYALI 309
           +A Y L+
Sbjct: 373 HASYPLV 379


>gi|431896621|gb|ELK06033.1| Cathepsin S [Pteropus alecto]
          Length = 331

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 170/303 (56%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K YR+K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+     I  
Sbjct: 32  KKTYSKHYREKIEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVISL 91

Query: 74  MTRLT-HSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  LT  S+ +R +    +SN +  +PD LDWR+KG +T    Q  CG+C+AFS   A++
Sbjct: 92  MGSLTVPSQWQRNVTY--KSNPNQKLPDSLDWRDKGCVTEVKYQGSCGSCWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS     N GC GG + +   Y+    G+  E  YPYK +
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYSNKGCNGGFMTSAFQYIIDNNGIDSEASYPYKAQ 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E ALK  +A  GP++V+I+AS  +F LY SG+Y D
Sbjct: 210 DGKCQYDSKFRAATCSKYTELPFGSEEALKEAVANKGPVSVAIDASHPSFFLYRSGVYYD 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
           ++CT   VNH +L+VGY     ++ W++KN W  ++GD GY+ + R + N CGIA+Y  Y
Sbjct: 270 QSCTLK-VNHGVLVVGYGNLDGKDYWLVKNSWGLNFGDKGYIRMARNSGNHCGIASYPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|6650391|gb|AAF21819.1|AF098670_1 silicatein beta [Tethya aurantium]
          Length = 334

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 165/301 (54%), Gaps = 7/301 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K YR    + ++ L W SN + I  HN  A   + G++L  NH  DL    ++ +
Sbjct: 36  KSQHGKSYRSGLQELERHLVWVSNKEYIDRHNANAD--VFGFSLAMNHFGDLSDNEFVDK 93

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
               T S  ++  V+  E+ E V  P+ LDWR KG +T   NQ DCGA YAFS   +++G
Sbjct: 94  YLSYTKSDKKKRNVKMFEAPEGVSYPESLDWRTKGAVTSVKNQGDCGASYAFSAIGSLEG 153

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
            +  +  ++  LS Q V+DCS+  GN GC GG++ NT  Y+    G+   + YP+KGKQ+
Sbjct: 154 ALSLAQGKLTYLSEQNVIDCSVAYGNHGCQGGNMYNTYLYILSNDGIDTSDGYPFKGKQT 213

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C + R      IS    +    E  L+  +A+ GP+AV+++ S   F+ Y  G+Y+   
Sbjct: 214 SCTYDRSCRGTSISGSIAITSGSESDLQAAVASAGPVAVAVDGSSRAFRFYDYGLYNLPG 273

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYAL 308
           C+S  ++HA+L+ GY        W++KN W  +WG +GY+ + R N N+CGIA  A Y  
Sbjct: 274 CSSYQLSHALLITGYGSFNGNQYWLVKNSWGTNWGMSGYIMMTRNNYNQCGIATDAAYPT 333

Query: 309 I 309
           +
Sbjct: 334 L 334


>gi|341878328|gb|EGT34263.1| CBN-CPL-1 protein [Caenorhabditis brenneri]
          Length = 336

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/305 (36%), Positives = 171/305 (56%), Gaps = 14/305 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQS---NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           YK+DY K+ ++S+++ + ++   N   I  HN++ + G   + +  NH++DL    Y K 
Sbjct: 34  YKEDYDKEYSESEEQTYMEAFVKNVIHIENHNRDHRLGRKTFEMGLNHIADLPFSQYRKL 93

Query: 73  -EMTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
               RL   SRI+ +       N  V +PD +DWR+   +T   NQ  CG+C+AFS   A
Sbjct: 94  NGYRRLFGDSRIKNSSSFLAPFN--VQVPDEVDWRDTHLVTDVKNQGMCGSCWAFSATGA 151

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ  +   ++  LS Q +VDCS   GN GC GG +     Y++   G+  EE YPYKG
Sbjct: 152 LEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHGVDTEESYPYKG 211

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C F +  I  D   +   P  DE  LK+ +AT GPI+++I+A   +FQLY  G+Y 
Sbjct: 212 RDMKCHFNKKTIGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGVYY 271

Query: 251 DEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           DE C+S+ ++H +LLVGY  +      W++KN W   WG+ GY+ + R  NN CG+A  A
Sbjct: 272 DEECSSEELDHGVLLVGYGTDPEHGDYWLVKNSWGTGWGEKGYIRIARNRNNHCGVATKA 331

Query: 305 VYALI 309
            Y L+
Sbjct: 332 SYPLV 336


>gi|392922426|ref|NP_001256718.1| Protein CPL-1, isoform a [Caenorhabditis elegans]
 gi|3879367|emb|CAB07275.1| Protein CPL-1, isoform a [Caenorhabditis elegans]
          Length = 337

 Score =  201 bits (511), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/305 (36%), Positives = 171/305 (56%), Gaps = 14/305 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQS---NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           YK+D+ K+ ++S+++ + ++   N   I  HN++ + G   + +  NH++DL    Y K 
Sbjct: 35  YKEDFDKEYSESEEQTYMEAFVKNMIHIENHNRDHRLGRKTFEMGLNHIADLPFSQYRKL 94

Query: 73  -EMTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
               RL   SRI+ +       N  V +PD +DWR+   +T   NQ  CG+C+AFS   A
Sbjct: 95  NGYRRLFGDSRIKNSSSFLAPFN--VQVPDEVDWRDTHLVTDVKNQGMCGSCWAFSATGA 152

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ  +   ++  LS Q +VDCS   GN GC GG +     Y++   G+  EE YPYKG
Sbjct: 153 LEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHGVDTEESYPYKG 212

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C F +  +  D   +   P  DE  LK+ +AT GPI+++I+A   +FQLY  G+Y 
Sbjct: 213 RDMKCHFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGVYY 272

Query: 251 DEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           DE C+S+ ++H +LLVGY  +      WI+KN W   WG+ GY+ + R  NN CG+A  A
Sbjct: 273 DEECSSEELDHGVLLVGYGTDPEHGDYWIVKNSWGAGWGEKGYIRIARNRNNHCGVATKA 332

Query: 305 VYALI 309
            Y L+
Sbjct: 333 SYPLV 337


>gi|5822035|pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L
          Length = 316

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/290 (37%), Positives = 160/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HNQE ++G H +T+  N   D+    + + M    + + R+  V +
Sbjct: 31  RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 90

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   E+   P  +DWREKG++TP  NQ  CG+ +AFS   A++GQ+F+ T  +  LS Q
Sbjct: 91  EPLFYEA---PRSVDWREKGYVTPVKNQGQCGSXWAFSATGALEGQMFRKTGRLISLSEQ 147

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +
Sbjct: 148 NLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDA 206

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  P+ E AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY
Sbjct: 207 GFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY 266

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              S        W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 267 GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 316


>gi|291383484|ref|XP_002708316.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 333

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 107/297 (36%), Positives = 162/297 (54%), Gaps = 26/297 (8%)

Query: 29  KKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVR 88
           +++  W+ N + I  HN E  QG  G+++  N   D+    + + M    H         
Sbjct: 47  RRRAVWEKNMRMIELHNGEYSQGKRGFSMAMNAYGDMTSEEFRQVMNGFHHQ-------- 98

Query: 89  SPESNESVL-------IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSE 141
            P+  E V        +P  +DWR+KG++TP   Q  CG+C+AFS   A++GQ+F+ T  
Sbjct: 99  -PDKKEKVFGKAVFQEVPSSVDWRDKGYVTPVKKQGRCGSCWAFSATGALEGQMFRKTGR 157

Query: 142 IEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPN 201
           +  LS Q ++DCS  +GN GC GG   +   YV+  GGL  E+ YPY+ +   C++  P 
Sbjct: 158 LVSLSEQNLIDCSWPAGNHGCRGGLTDHAFQYVKDNGGLDSEDSYPYEARNLPCRYD-PQ 216

Query: 202 IVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNH 261
             V   +  V  P+ E+AL   +ATVGPIAV+I+A   +FQ Y  GIY +  C+S + NH
Sbjct: 217 KSVANGTGFVRIPRQENALMEAVATVGPIAVAIDAGHPSFQFYKEGIYYEPNCSSKHHNH 276

Query: 262 AMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           A+L+VGY        +   W++KN W   WG+ GY+ + K  NN CGIA++A Y  +
Sbjct: 277 AVLVVGYGYEGAESDSNKYWLVKNSWGKRWGEAGYIRIAKDRNNHCGIASHASYPTV 333


>gi|189525868|ref|XP_001341714.2| PREDICTED: cathepsin L1-like isoform 1 [Danio rerio]
          Length = 336

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 163/292 (55%), Gaps = 14/292 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    + + M    H   + +  + 
Sbjct: 47  RRMIWEENLRKIEQHNFEYSYGNHTFKMGMNQFGDMTNEEFRQAMNGYKHDPNQTS--QG 104

Query: 90  PESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
           P   E      P  +DWR++G++TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S 
Sbjct: 105 PLFMEPSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSE 164

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDI 206
           Q +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V  I
Sbjct: 165 QNLVDCSRPQGNQGCNGGLMDQAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKI 224

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + AC+S  ++HA+L+V
Sbjct: 225 TGFVDIPSGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACSSSRLDHAVLVV 284

Query: 267 GYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY            WI+KN WS  WGD GY+Y+ K  NN CG+A  A Y L+
Sbjct: 285 GYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGVATKASYPLM 336


>gi|55740402|gb|AAV63977.1| cathepsin L precursor [Artemia franciscana]
          Length = 338

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 165/303 (54%), Gaps = 12/303 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK+Y  +  +  +   +  N  K+  HN   ++G   Y +  N   DL    +   M  
Sbjct: 38  HKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYQVAMNKFGDLLHHEFRSIMNG 97

Query: 77  LTH-----SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
             H     SR   T      +N  V +P+ +DWREKG ITP  +Q  CG+C+AFS   A+
Sbjct: 98  YQHKKQNSSRAESTFTFMEPAN--VEVPESVDWREKGAITPVKDQGQCGSCWAFSSTGAL 155

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F+ T ++  LS Q ++DCS   GN GC GG +     Y++   G+  E  YPY+ +
Sbjct: 156 EGQTFRKTGKLISLSEQNLIDCSGKYGNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAE 215

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
             +C++   N       +  +P  +E  LK  +ATVGP++V+I+AS  +FQ Y+ G+Y +
Sbjct: 216 DDVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYE 275

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +C SD ++H +L+VGY     ++ W++KN WS HWGD GY+ + R   N CG+A  A Y
Sbjct: 276 PSCDSDDLDHGVLVVGYGSDNGKDYWLVKNSWSEHWGDEGYIKIARNRKNHCGVATAASY 335

Query: 307 ALI 309
            L+
Sbjct: 336 PLV 338


>gi|442754503|gb|JAA69411.1| Putative cathepsin l-like cysteine proteinase b [Ixodes ricinus]
          Length = 335

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 166/307 (54%), Gaps = 13/307 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y  +  +  +   +  N  KI  HN++  +G   Y++  N   D+    ++  
Sbjct: 31  KAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNEFGDMLHHEFVS- 89

Query: 74  MTRLTHSRIRRTLVRS------PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
            TR    R  +   R       PE+ E   +P  +DWR KG +TP  NQ  CG+C+AFS 
Sbjct: 90  -TRNGFKRNYKDQPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQGQCGSCWAFSA 148

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             +++GQ F+ +  +  LS Q +VDCS   GN GC GG + N   Y++   G+  E+ YP
Sbjct: 149 TGSLEGQHFRKSGSMVSLSEQNLVDCSTDFGNNGCEGGLMDNAFKYIRANKGIDTEKSYP 208

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y G    C FK+  +    S +  +    E  LK  +ATVGPI+V+I+AS  +FQ Y+ G
Sbjct: 209 YNGTDGTCHFKKSTVGATDSGFVDIKEGSETQLKKAVATVGPISVAIDASHESFQFYSDG 268

Query: 248 IYDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           +YD+  C S+ ++H +L+VGY T N    W++KN W   WGD GY+ + R   N+CGIA+
Sbjct: 269 VYDEPECDSESLDHGVLVVGYGTLNGTDYWLVKNSWGTTWGDEGYIRMSRNKKNQCGIAS 328

Query: 303 YAVYALI 309
            A Y L+
Sbjct: 329 SASYPLV 335


>gi|194320502|gb|ACF48469.1| cathepsin L [Triatoma brasiliensis]
          Length = 330

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/313 (35%), Positives = 174/313 (55%), Gaps = 14/313 (4%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW +      K YK  + +     + K+ +  N KKI  HN + +QG   Y +  NH  
Sbjct: 25  EEWHVFKAMHGKTYKNQFEEMF---RMKI-FMDNKKKIEAHNAKYEQGEVSYKMMMNHFG 80

Query: 64  DLHPRHYIKEMT--RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGA 121
           DL    +   M   +++    R   +  P ++    +P  +DWR+KG +TP  +Q  CG+
Sbjct: 81  DLMVHEFKALMNGFKMSPDTKRNGELYFPSNSN---LPKTVDWRQKGAVTPVKDQGQCGS 137

Query: 122 CYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLM 181
           C++FS   +++GQ+F  T ++  LS Q +VDCS   GN GC GG +     YV    G+ 
Sbjct: 138 CWSFSATGSLEGQVFLKTGKLVSLSEQNLVDCSTSYGNNGCEGGLMDQAFQYVSDNKGID 197

Query: 182 KEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTF 241
            E  YPY+ +++ C+FK+  +         +P  DE AL+  LATVGPI+V+I+A+  +F
Sbjct: 198 TEASYPYEARENTCRFKKNKVGGTDKGHVDIPAGDEKALQNALATVGPISVAIDANHGSF 257

Query: 242 QLYASGIYDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NN 296
           Q Y+ G+Y++  C+S  ++H +L VGY T N    W++KN W   WG+NGY+ + R  +N
Sbjct: 258 QFYSKGVYNEPNCSSYDLDHGVLAVGYGTENGQDYWLVKNSWGPSWGENGYIKIARNHSN 317

Query: 297 RCGIANYAVYALI 309
            CGIA+ A Y L+
Sbjct: 318 HCGIASMASYPLV 330


>gi|296228726|ref|XP_002759933.1| PREDICTED: cathepsin S isoform 1 [Callithrix jacchus]
          Length = 330

 Score =  201 bits (510), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/302 (36%), Positives = 165/302 (54%), Gaps = 9/302 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +    +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNITY--KSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
            Q+   T ++  LS Q +VDCS   GN GC GG +     Y+    G+  E  YPYK   
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKAMD 209

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C++         S ++ LP   E  LK  +A  GP+ V ++AS  +F LY SG+Y D 
Sbjct: 210 QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHSSFFLYRSGVYYDP 269

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
           ACT + VNH +L++GY        W++KN W  ++G+ GY+ + R   N CGIA+Y  Y 
Sbjct: 270 ACTQN-VNHGVLVIGYGDLNGEEYWLVKNSWGSNFGERGYIRMARNKGNHCGIASYPSYP 328

Query: 308 LI 309
            I
Sbjct: 329 EI 330


>gi|268560858|ref|XP_002638172.1| C. briggsae CBR-CPL-1 protein [Caenorhabditis briggsae]
          Length = 336

 Score =  201 bits (510), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/305 (36%), Positives = 171/305 (56%), Gaps = 14/305 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQS---NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           YK+D+ K+ T+S+++ + ++   N   I  HN++ + G   + +  NH++DL    Y K 
Sbjct: 34  YKEDFDKEYTESEEQTYMEAFVKNVIHIENHNRDHRLGRKTFEMGLNHIADLPFSQYRKL 93

Query: 73  -EMTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
               RL   SRI+ +       N  V +PD +DWR+   +T   NQ  CG+C+AFS   A
Sbjct: 94  NGYRRLFGDSRIKNSSSFLAPFN--VQVPDEVDWRDTHLVTDVKNQGMCGSCWAFSATGA 151

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ  +   ++  LS Q +VDCS   GN GC GG +     Y++   G+  EE YPYKG
Sbjct: 152 LEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFEYIRDNHGVDTEESYPYKG 211

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C F +  +  D   +   P  DE  LK+ +AT GPI+++I+A   +FQLY  G+Y 
Sbjct: 212 RDMKCHFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGVYY 271

Query: 251 DEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           DE C+S+ ++H +LLVGY  +      W++KN W   WG+ GY+ + R  NN CG+A  A
Sbjct: 272 DEECSSEELDHGVLLVGYGTDPEHGDYWLVKNSWGTGWGEKGYIRIARNRNNHCGVATKA 331

Query: 305 VYALI 309
            Y L+
Sbjct: 332 SYPLV 336


>gi|157819967|ref|NP_001099569.1| cathepsin 7 precursor [Rattus norvegicus]
 gi|374110484|sp|D3ZZ07.1|CAT7_RAT RecName: Full=Cathepsin 7; Flags: Precursor
 gi|149039730|gb|EDL93846.1| cathepsin 7 (predicted) [Rattus norvegicus]
          Length = 331

 Score =  200 bits (509), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 108/292 (36%), Positives = 162/292 (55%), Gaps = 14/292 (4%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL 86
           + +++  W+ N K I  H  +    ++ +T+  N   D+      +EM  +T S      
Sbjct: 45  EKQRRAVWEENVKMIKWHTMQNGLWMNNFTIEMNEFGDMTG----EEMRMMTDSSALTLR 100

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
                   +V IP  LDWR+ G + P  +Q  CGAC+AFS+A++I+ Q+FK T ++  LS
Sbjct: 101 NGKHIQKRNVKIPKTLDWRDTGCVAPVRSQGGCGACWAFSVAASIESQLFKKTGKLIPLS 160

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDI 206
           +Q ++DC++  GN  C+GG       YV+  GGL  E  YPY+ K   C+++    VV I
Sbjct: 161 VQNLIDCTVTYGNNDCSGGKPYTAFQYVKNNGGLEAEATYPYEAKLRHCRYRPERSVVKI 220

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + + V+ P++E AL   L T GPIAV+I+ S  +F+ Y  GIY +  C  D ++H +LLV
Sbjct: 221 ARFFVV-PRNEEALMQALVTYGPIAVAIDGSHASFKRYRGGIYHEPKCRRDTLDHGLLLV 279

Query: 267 GY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           GY         R  W+LKN     WG+ GYM L R  NN CGIA+YA+Y L+
Sbjct: 280 GYGYEGHESENRKYWLLKNSHGEQWGERGYMKLPRDQNNYCGIASYAMYPLL 331


>gi|28194643|gb|AAO33583.1|AF479265_1 cathepsin P [Meriones unguiculatus]
          Length = 334

 Score =  200 bits (509), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/311 (35%), Positives = 170/311 (54%), Gaps = 25/311 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL------HP 67
           ++KYKK+Y  +    ++ + W+ N + +  HN E   G +G+T+  N   DL      +P
Sbjct: 33  KEKYKKNYSPEVEAVRRAI-WEENMRIVKLHNGENGLGKNGFTMELNSFGDLTGGEFRNP 91

Query: 68  RHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              I     LT  R  + +V          +P   +W  +G++TP  NQ  CG+C+AF+ 
Sbjct: 92  MADIPVPAALTVERKDKKIVDG--------LPKFKNWINEGYVTPVRNQGTCGSCWAFAA 143

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             AI+GQ+F  T ++  LS+Q +VDCS   GN GCA GS      YV    GL  E  YP
Sbjct: 144 TGAIEGQMFWKTGKLTPLSVQNLVDCSEKQGNKGCAQGSAFRAFMYVNETKGLQDEISYP 203

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+GKQ  C++   N    ++ + +L PQ+E  L V +A++GP+A +++AS  +F+ Y  G
Sbjct: 204 YEGKQGTCRYNSSNSRAYVTDFRLL-PQNEIYLLVAVASIGPVAAAVDASQDSFRFYRGG 262

Query: 248 IYDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRC 298
           IY +  C+   VNHA+L+VGY         ++ W++KN W  +WG  GYM + R  NN C
Sbjct: 263 IYYEPKCSQYSVNHAVLVVGYGYEGNETDGKDYWLIKNSWGENWGMRGYMKIARDRNNHC 322

Query: 299 GIANYAVYALI 309
           GIA+ A +  I
Sbjct: 323 GIASQASFVDI 333


>gi|115743|sp|P07154.2|CATL1_RAT RecName: Full=Cathepsin L1; AltName: Full=Cyclic protein 2;
           Short=CP-2; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Procathepsin L;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|38648869|gb|AAH63175.1| Cathepsin L1 [Rattus norvegicus]
 gi|149029152|gb|EDL84437.1| cathepsin L, isoform CRA_a [Rattus norvegicus]
 gi|386267881|dbj|BAM14518.1| cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  200 bits (509), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 163/290 (56%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVR 88
           ++  W+ N + I  HN E   G HG+T+  N   D+    + + +    H + ++  L +
Sbjct: 48  RRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + IP  +DWREKG +TP  NQ  CG+C+AFS +  ++GQ+F  T ++  LS Q
Sbjct: 108 EPLM---LQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     Y++  GGL  EE YPY+ K   CK++    V + + 
Sbjct: 165 NLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           + V  PQ E AL   +ATVGPI+V+++AS  + Q Y+SGIY +  C+S  ++H +L+VGY
Sbjct: 225 F-VDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       W++KN W   WG +GY+ + K  NN CG+A  A Y ++
Sbjct: 284 GYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333


>gi|410990010|ref|XP_004001243.1| PREDICTED: cathepsin L1 isoform 2 [Felis catus]
          Length = 337

 Score =  200 bits (509), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 111/295 (37%), Positives = 167/295 (56%), Gaps = 20/295 (6%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL-THSRIRRTLVR 88
           ++  W+ N K I  HN+E  QG H +T+  N   D+    + + M  L    R +  + +
Sbjct: 48  RRAVWERNMKMIEQHNREHSQGKHTFTMAMNAFGDMTNEEFRQVMNGLKIQKRKKWKVFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
           +P   E   IP  +DWREKG++TP  +Q  C  C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 APFFVE---IPSSVDWREKGYVTPVKDQGYCLCCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY----KGKQSICKFKRPNIVV 204
            +VDCS   GN G +GG + +   YV+  GGL  EE YPY    K     CK++  N V 
Sbjct: 165 NLVDCSQTEGNEGYSGGLIDDAFQYVKDNGGLDSEESYPYHAQVKRASYSCKYRPENSVA 224

Query: 205 DISS-WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAM 263
           +++  W +  P  E+ L +TLA VGPI+ +I+AS  TF+ Y  GIY D +C+S+ V+H +
Sbjct: 225 NVTDYWDI--PSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGV 282

Query: 264 LLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           L+VGY         +  WI+KN W   WG +GY+ + K  +N CGIA+ A +  +
Sbjct: 283 LVVGYGADGTETENKKYWIIKNSWGTDWGMDGYIKMAKDRDNHCGIASLASFPTV 337


>gi|343978787|gb|AEM76722.1| cathepsin L-like proteinase [Triatoma brasiliensis]
          Length = 330

 Score =  200 bits (509), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 173/299 (57%), Gaps = 12/299 (4%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT--- 75
           K+Y+ +  +  ++  + +N K+I  HN + +QG   Y ++ NH  DL   H IK +    
Sbjct: 36  KNYKNQFEEMFRRKIFMNNKKRIEAHNAKYEQGEVSYKMKMNHFGDLM-SHEIKALMNGF 94

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           ++T +  R   +  P +++   +P  +DWR+KG +TP  +Q  CG+C++FS   +++GQI
Sbjct: 95  KMTPNTKREGKIYFPSNDK---LPKSVDWRQKGAVTPVKDQGQCGSCWSFSATGSLEGQI 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F    ++  LS Q ++DCS   GN GC GG +     YV    G+  E  YPY+ +   C
Sbjct: 152 FLKKGKLVSLSEQNLMDCSKEYGNNGCEGGLMDKAFQYVSDNKGIDTESSYPYEARDYAC 211

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           +FK+  +      +  +P  DE AL+  LATVGPI+V+I+AS  +F  Y+ G+Y++  C+
Sbjct: 212 RFKKDKVGGTDKGYVDIPEGDEKALQNALATVGPISVAIDASHESFHFYSEGVYNEPYCS 271

Query: 256 SDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           S  ++H +L VGY T N    W++KN W   WG++GY+ + R  +N CGIA+ A Y ++
Sbjct: 272 SYDLDHGVLAVGYGTENGQDYWLVKNSWGPSWGESGYIKIARNHSNHCGIASMASYPIV 330


>gi|288548564|gb|ADC52430.1| cathepsin L1 cysteine protease [Pinctada fucata]
          Length = 331

 Score =  200 bits (509), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 112/313 (35%), Positives = 164/313 (52%), Gaps = 12/313 (3%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           ++EW I      K Y  D  +      ++L W+ N   I  HN+ A +G H + L  N  
Sbjct: 25  DQEWAIYKDMFAKNYVADEERM-----RRLVWEDNIDYIEKHNRRADRGEHKFWLGTNEY 79

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGAC 122
           +D+    +   M         +       SN   L PD +DWR+KG++TP  NQ  CG+C
Sbjct: 80  ADMTIDEFKAIMNGFIMQNGTKGDTYMSPSNIGDL-PDKVDWRDKGYVTPVKNQGHCGSC 138

Query: 123 YAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMK 182
           ++FS   +++GQ FKST ++  LS Q ++DCS   GN GC GG +     Y+Q   G+  
Sbjct: 139 WSFSATGSLEGQHFKSTGKLVSLSEQNLIDCSKKEGNHGCKGGLMDFAFEYIQKNDGIDT 198

Query: 183 EEDYPYKGKQSI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTF 241
           E+ YPY  K  I C+FK+ ++         LP Q E AL+  +ATVGPI+V+++A   +F
Sbjct: 199 EQSYPYTAKDGIECRFKKADVGATDKGKVDLPRQSEKALQEAVATVGPISVAMDAGHRSF 258

Query: 242 QLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGN-N 296
           QLY  GIY +  C+S  ++H +L VGY        W++KN W   WG  G+  L R + N
Sbjct: 259 QLYKRGIYTEPMCSSTKLDHGVLAVGYGSEGEGDYWLVKNSWGATWGMEGFFMLARNHRN 318

Query: 297 RCGIANYAVYALI 309
            CGIA  A Y  +
Sbjct: 319 ECGIATQASYPKV 331


>gi|189525870|ref|XP_001923796.1| PREDICTED: cathepsin L1 [Danio rerio]
          Length = 335

 Score =  200 bits (509), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 161/290 (55%), Gaps = 11/290 (3%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    + + M    H   R +    
Sbjct: 47  RRMIWEENLRKIEQHNFEYSLGNHTFKMGMNQFGDMTNEEFRQAMNGYKHDPNRTSQGPL 106

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
               +    P  +DWR++G++TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S Q 
Sbjct: 107 FMEPKFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQN 166

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDISS 208
           +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V  I+ 
Sbjct: 167 LVDCSRPHGNQGCNGGLMDQAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITG 226

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + ACTS  ++HA+L+VGY
Sbjct: 227 FVDIPKGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACTSQ-LDHAVLVVGY 285

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       WI+KN WS  WGD GY+Y+ K  NN CGIA  A Y L+
Sbjct: 286 GYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 335


>gi|149751225|ref|XP_001490531.1| PREDICTED: cathepsin S-like [Equus caballus]
          Length = 332

 Score =  200 bits (509), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/303 (37%), Positives = 164/303 (54%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+        
Sbjct: 33  KKTYGKQYKEKNEEVARRLIWERNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVTSL 92

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +      NE   +PD LDWREKG +T    Q  CGAC+AFS   A++
Sbjct: 93  MSSLRVPSQWQRNVTYKSNPNEK--LPDSLDWREKGCVTEVKYQGSCGACWAFSAVGALE 150

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T  +  LS Q +VDCS     N GC GG +     Y+    G+  +  YPYK  
Sbjct: 151 AQLKLKTGNLVSLSAQNLVDCSTEKYSNKGCNGGFMTAAFQYIIDNNGIDSDASYPYKAM 210

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N     S ++ LP   E  LK  +A  GP++V+I+AS  +F LY SG+Y D
Sbjct: 211 DGKCRYDSKNRAATCSKYTELPFGSEDDLKEAVANKGPVSVAIDASHPSFFLYKSGVYYD 270

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R + N CGIANY  Y
Sbjct: 271 PSCTQN-VNHGVLVVGYGNLNGKDYWLVKNSWGINFGDKGYIRMARNSGNHCGIANYCSY 329

Query: 307 ALI 309
             I
Sbjct: 330 PEI 332


>gi|116563690|gb|ABJ99858.1| cathepsin L [Hippoglossus hippoglossus]
          Length = 336

 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 163/306 (53%), Gaps = 17/306 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y +K  +  +++ W+ N +KI  HN E   G H + L  NH  D+    + + M  
Sbjct: 35  HSKKYHEK-EEGWRRMVWEKNLQKIELHNLEHSMGTHSFRLGMNHFGDMTHEEFRQIMNG 93

Query: 77  L---THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
               T  +   +L   P     +  P  +DWREKG++TP  +Q  CG+C+AFS   A++G
Sbjct: 94  YKLKTQRKFTGSLFMEPNF---MTAPSAVDWREKGYVTPVKDQGQCGSCWAFSTTGALEG 150

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQ 192
           Q F+ T ++  LS Q +VDCS   GN GC GG +     YV    GL  E+ YPY G   
Sbjct: 151 QQFRKTGKLVSLSEQNLVDCSRPEGNEGCGGGLMDQAFQYVTDNQGLDSEDSYPYTGTDD 210

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C +       + + +  +P   EHAL   +A+VGP++V+I+A   +FQ Y SGIY ++
Sbjct: 211 QPCHYDPLYNSANDTGFVDVPSGKEHALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEK 270

Query: 253 ACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANY 303
            C+S+ ++H +L VGY         +  WI+KN W   WGD GY+Y+ K   N CGIA  
Sbjct: 271 ECSSEELDHGVLAVGYGFEGEDKMGKKFWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATA 330

Query: 304 AVYALI 309
           A Y L+
Sbjct: 331 ASYPLV 336


>gi|47213724|emb|CAF95155.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 336

 Score =  200 bits (508), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 166/304 (54%), Gaps = 13/304 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL-----HPRHYI 71
           ++++Y  +  ++ ++  W+ N   +  HNQEA  G+H Y L  NHL D+       +  +
Sbjct: 35  HRREYGSQNEEAIRRAVWEKNMHVVEAHNQEAALGMHSYELAMNHLGDMVSSAGTSKEVL 94

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           ++MT L    + +       +     +P +LD+R+KG +T   +Q  CG+C+AFS A A+
Sbjct: 95  EKMTGLLVPMVDQRNATMALNGSVQRLPRNLDYRKKGAVTAVKDQGACGSCWAFSSAGAL 154

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +G + K T ++ +LS Q +VDC  +  N GC GG + N   YV    GL  E  YPY G+
Sbjct: 155 EGMLAKKTGKLVDLSPQNLVDC--VKENSGCGGGYMTNAFKYVATNKGLDSEAAYPYVGQ 212

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           +  C++K     V+   +  +P  +E  L   L   GP+A+ I+A+  TF LY+ G+Y D
Sbjct: 213 EQPCQYKEAGKAVECRRYEEVPQGNEKLLAYALFKHGPVAIGIDATLTTFHLYSKGVYYD 272

Query: 252 EACTSDYVNHAMLLVGY--TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
             C  + +NHA+LLVGY  TR     WI+KN W   WG  GY+ + R   N CGIAN A 
Sbjct: 273 PDCNPEDINHAVLLVGYGVTRRGQQYWIVKNSWGTGWGTEGYILMARNRGNLCGIANLAS 332

Query: 306 YALI 309
           Y ++
Sbjct: 333 YPIM 336


>gi|157787177|ref|NP_001099150.1| cathepsin L1-like precursor [Danio rerio]
 gi|157422879|gb|AAI53505.1| MGC174152 protein [Danio rerio]
          Length = 336

 Score =  200 bits (508), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 162/292 (55%), Gaps = 14/292 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    +   M    H   + +  + 
Sbjct: 47  RRMIWEENLRKIEQHNFEYSYGNHTFKMGMNQFGDMTNEEFRHAMNGYKHDPNQTS--QG 104

Query: 90  PESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
           P   E      P  +DWR++G++TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S 
Sbjct: 105 PLFMEPSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSE 164

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDI 206
           Q +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V  I
Sbjct: 165 QNLVDCSRPQGNQGCNGGLMDQAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKI 224

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + AC+S  ++HA+L+V
Sbjct: 225 TGFVDIPRGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACSSSRLDHAVLVV 284

Query: 267 GYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY            WI+KN WS  WGD GY+Y+ K  NN CGIA  A Y L+
Sbjct: 285 GYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 336


>gi|410042826|ref|XP_003951516.1| PREDICTED: cathepsin L1 [Pan troglodytes]
          Length = 278

 Score =  200 bits (508), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 109/281 (38%), Positives = 156/281 (55%), Gaps = 14/281 (4%)

Query: 39  KKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-RSPESNESVL 97
           K I  HNQE ++G H +T+  N   D+    + + M    + + R+  V + P   E+  
Sbjct: 2   KMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEA-- 59

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
            P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q +VDCS   
Sbjct: 60  -PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ 118

Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
           GN GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V   +  V  P+ E
Sbjct: 119 GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY-NPKYSVANDTGFVDIPKQE 177

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----- 272
            AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY   S     
Sbjct: 178 KALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDN 237

Query: 273 ---WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 238 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 278


>gi|344275470|ref|XP_003409535.1| PREDICTED: cathepsin S-like isoform 1 [Loxodonta africana]
          Length = 331

 Score =  200 bits (508), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/303 (37%), Positives = 168/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYSKQYKEKNEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLSMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +    +SN +  +PD LDWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNVTF--KSNPNQKLPDSLDWREKGCVTDVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS     N GC GG +     Y+    G+  E  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSGEKYSNKGCNGGFMTRAFQYIIDNNGIDSEASYPYKAT 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N     S ++ LP   E ALK  +A  GP++V I+AS  +F LY SG+Y D
Sbjct: 210 DGKCQYDPKNRAATCSKYTELPYGSEDALKEAVANKGPVSVGIDASRPSFFLYKSGVYYD 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +CT D VNH +L+VGY     ++ W++KN W  ++G+ GY+ + R + N CGIA++  Y
Sbjct: 270 PSCT-DNVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGEQGYIRMARNSGNHCGIASFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|156739281|ref|NP_001096588.1| cathepsin L1-like precursor [Danio rerio]
 gi|166158351|ref|NP_001107526.1| uncharacterized protein LOC100135391 precursor [Xenopus (Silurana)
           tropicalis]
 gi|326672305|ref|XP_003199634.1| PREDICTED: cathepsin L1-like [Danio rerio]
 gi|156230096|gb|AAI52237.1| MGC174155 protein [Danio rerio]
 gi|163916362|gb|AAI57707.1| LOC100135391 protein [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  200 bits (508), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 163/292 (55%), Gaps = 15/292 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    + + M    H   R +  + 
Sbjct: 47  RRMIWEENLRKIEQHNFEYSYGNHTFKMGMNQFGDMTNEEFRQAMNGYKHDPNRTS--QG 104

Query: 90  PESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
           P   E      P  +DWR++G++TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S 
Sbjct: 105 PLFMEPSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSE 164

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDI 206
           Q +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V  I
Sbjct: 165 QNLVDCSRPQGNQGCNGGIMDQAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKI 224

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + ACTS  ++HA+L+V
Sbjct: 225 TGFVDIPRGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACTSR-LDHAVLVV 283

Query: 267 GYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY            WI+KN WS  WGD GY+Y+ K  NN CGIA  A Y L+
Sbjct: 284 GYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 335


>gi|405966498|gb|EKC31776.1| Cathepsin L [Crassostrea gigas]
          Length = 330

 Score =  200 bits (508), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 169/314 (53%), Gaps = 14/314 (4%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           + EW +      K+Y  +      ++++++ W+ N   I  HN  A +G + + L  N  
Sbjct: 24  DSEWQLYLKAHGKQYGAE-----EEARRRVIWEGNLDYIEKHNLAADRGDYSFWLGMNEY 78

Query: 63  SDLHPRHYIKEMT--RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCG 120
            D+    +   M   ++ +   R +L   P SN   L PD +DWR KG++TP  NQ  CG
Sbjct: 79  GDMTNEEFRSTMNGYKMRNGTSRGSLYLPP-SNIGDL-PDTVDWRPKGYVTPIKNQGQCG 136

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C++FS   +++GQ FK T ++  LS Q +VDCS   GN GC GG + +   Y++   G+
Sbjct: 137 SCWSFSATGSLEGQTFKKTGKLPSLSEQNLVDCSQKQGNHGCQGGLMDDAFQYIKDNSGI 196

Query: 181 MKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
             E  YPY+ K   C+F   N+    S ++ +  + E  L+  +ATVGPI+V+I+AS  +
Sbjct: 197 DTESSYPYEAKNGKCRFNAANVGATDSGFTDIKSKSESDLQSAVATVGPISVAIDASHMS 256

Query: 241 FQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGN- 295
           FQLY SG+Y +  C+   ++H +L VGY   S    W++KN W   WG  GY+ + R   
Sbjct: 257 FQLYRSGVYHEFFCSETRLDHGVLAVGYGTESGKDYWLVKNSWGESWGQKGYIMMSRNKR 316

Query: 296 NRCGIANYAVYALI 309
           N CGIA  A Y  +
Sbjct: 317 NNCGIATSASYPTV 330


>gi|351705687|gb|EHB08606.1| Cathepsin S [Heterocephalus glaber]
          Length = 331

 Score =  200 bits (508), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 113/304 (37%), Positives = 169/304 (55%), Gaps = 12/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+        
Sbjct: 32  KKTYGKHYQEKNEEQVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVRSL 91

Query: 74  MTRLTHSRIRRTLVR--SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           M+ L   R+ R  +R  + +S+ +  +PD +DWREKG +T    Q  CG+C+AFS   A+
Sbjct: 92  MSSL---RVPRQWLRNVTYKSDPNQKLPDSVDWREKGCVTEVKYQGACGSCWAFSAVGAL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           +GQ+   T ++  LS Q +VDCS     N GC+GG +     YV    G+  E  YPYK 
Sbjct: 149 EGQLKLKTGKLVSLSAQNLVDCSTEKYRNKGCSGGFMTEAFQYVIDNNGIDSETSYPYKA 208

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +   N     S ++ LP   E ALK  +A  GP++V+++AS  +F LY +G+YD
Sbjct: 209 TDEKCHYDSKNRAATCSRYTELPYGSEEALKEAVANKGPVSVAVDASRPSFFLYKNGVYD 268

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D +CT + V H +L VGY     ++ W++KN W  ++GD GY+ + R   N CGIA+Y+ 
Sbjct: 269 DPSCTQN-VTHGVLAVGYGNLNGKDYWLVKNSWGLYFGDQGYIRMARNKGNHCGIASYSS 327

Query: 306 YALI 309
           Y  I
Sbjct: 328 YPEI 331


>gi|326672297|ref|XP_003199631.1| PREDICTED: cathepsin L1-like [Danio rerio]
          Length = 336

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 162/292 (55%), Gaps = 14/292 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    +   M    H   + +  + 
Sbjct: 47  RRMIWEENLRKIEQHNFEYSYGNHTFKMGMNQFGDMTNEEFRHAMNGYKHDPNQTS--QG 104

Query: 90  PESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
           P   E      P  +DWR++G++TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S 
Sbjct: 105 PLFMEPSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSE 164

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDI 206
           Q +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V  I
Sbjct: 165 QNLVDCSRPHGNQGCNGGLMDQAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKI 224

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + AC+S  ++HA+L+V
Sbjct: 225 TGFVDIPKGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACSSSRLDHAVLVV 284

Query: 267 GYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY            WI+KN WS  WGD GY+Y+ K  NN CGIA  A Y L+
Sbjct: 285 GYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 336


>gi|55740406|gb|AAV63979.1| cathepsin L1 precursor [Artemia parthenogenetica]
          Length = 338

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 164/303 (54%), Gaps = 12/303 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK+Y  +  +  +   +  N  K+  HN   ++G   Y +  N   DL    +   M  
Sbjct: 38  HKKEYPSQLEEKLRMKIYLENKHKVAKHNILYEKGEKSYQVAMNKFGDLLHHEFRSIMNG 97

Query: 77  LTH-----SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
             H     SR   T      +N  V +P+ +DWREKG ITP  +Q  CG+C+AFS   A+
Sbjct: 98  YQHKKQNSSRAESTFTFMEPAN--VEVPESVDWREKGAITPVKDQGQCGSCWAFSSTGAL 155

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F+ T ++  LS Q ++DCS   GN GC GG +     Y++   G+  E  YPY+ +
Sbjct: 156 EGQTFRKTGKLVSLSEQNLIDCSGKYGNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAE 215

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
             +C++   N       +  +P  +E  LK  +ATVGP++V+I+AS  +FQ Y+ G Y +
Sbjct: 216 DGVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGXYYE 275

Query: 252 EACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +C SD ++H +L+VGY  ++    W++KN WS HWGD GY+ + R   N CG+A  A Y
Sbjct: 276 PSCDSDDLDHGVLVVGYGSDNGEDYWLVKNSWSEHWGDEGYIKIARNRKNHCGVATAASY 335

Query: 307 ALI 309
            L+
Sbjct: 336 PLV 338


>gi|209693435|ref|NP_001129410.1| cathepsin L precursor [Acyrthosiphon pisum]
 gi|251823771|ref|NP_001156569.1| cathepsin L precursor [Acyrthosiphon pisum]
          Length = 341

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 166/318 (52%), Gaps = 16/318 (5%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW +  I    ++KK Y     ++ +K  +  N  KI  HN+  + G   Y L  NH  
Sbjct: 28  EEWSLFKI----QFKKLYEDIKEETFRKKVYLDNKLKIARHNKLYESGEETYALEMNHFG 83

Query: 64  DLHPRHYIKEMTRLTHSRI--RRTLVRSPE----SNESVLIPDHLDWREKGFITPDWNQE 117
           DL    Y K M     S     R            +E+V+IP  +DWR+KG++TP  NQ 
Sbjct: 84  DLMQHEYTKMMNGFKPSLAGGDRNFTNDEAVTFLKSENVVIPKSVDWRKKGYVTPVKNQG 143

Query: 118 DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177
            CG+C++FS   +++GQ F+ T  +  LS Q ++DCS   GN GC GG +     Y++  
Sbjct: 144 QCGSCWSFSATGSLEGQHFRKTGVLVSLSEQNLIDCSRKYGNNGCEGGLMDLAFKYIKSN 203

Query: 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
            GL  E+ YPY+ +   C++   N       +  +P  DE AL   LATVGP++++I+AS
Sbjct: 204 KGLDTEKSYPYEAEDDKCRYNPENSGATDKGFVDIPEGDEDALMHALATVGPVSIAIDAS 263

Query: 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLK 292
              FQ Y  G++ +  C+S  ++H +L VG+  +      WI+KN W   WGD GY+ + 
Sbjct: 264 SEKFQFYKKGVFYNPRCSSTELDHGVLAVGFGSDKKGGDYWIVKNSWGKTWGDEGYIMMA 323

Query: 293 RG-NNRCGIANYAVYALI 309
           R   N CG+A+ A Y L+
Sbjct: 324 RNKKNNCGVASSASYPLV 341


>gi|156739275|ref|NP_001096585.1| cathepsin L1-like precursor [Danio rerio]
 gi|156230123|gb|AAI52285.1| MGC174857 protein [Danio rerio]
          Length = 335

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 163/292 (55%), Gaps = 15/292 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    + + M    H   R +  + 
Sbjct: 47  RRMIWEENLRKIEQHNFEYSYGNHTFKMGMNQFGDMTNEEFRQAMNGYKHDPNRTS--QG 104

Query: 90  PESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
           P   E      P  +DWR++G++TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S 
Sbjct: 105 PLFMEPSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSE 164

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDI 206
           Q +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V  I
Sbjct: 165 QNLVDCSRPQGNQGCNGGIMDQAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKI 224

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + ACTS  ++HA+L+V
Sbjct: 225 TGFVDIPRGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACTSR-LDHAVLVV 283

Query: 267 GYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY            WI+KN WS  WGD GY+Y+ K  NN CGIA  A Y L+
Sbjct: 284 GYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 335


>gi|6978723|ref|NP_037288.1| cathepsin L1 preproprotein [Rattus norvegicus]
 gi|55888|emb|CAA68691.1| prepro-cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 163/290 (56%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVR 88
           ++  W+ N + I  HN E   G HG+T+  N   D+    + + +    H + ++  L +
Sbjct: 48  RRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQ 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     + IP  +DWREKG +TP  NQ  CG+C+AFS +  ++GQ+F  T ++  LS Q
Sbjct: 108 EPLM---LQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG +     Y++  GGL  EE YPY+ K   CK++    V + + 
Sbjct: 165 NLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           + V  PQ E AL   +ATVGPI+V+++AS  + Q Y+SGIY +  C+S  ++H +L+VGY
Sbjct: 225 F-VDIPQQEKALMKPVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       W++KN W   WG +GY+ + K  NN CG+A  A Y ++
Sbjct: 284 GYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333


>gi|21425246|emb|CAD33266.1| cathepsin L [Aphis gossypii]
          Length = 341

 Score =  200 bits (508), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 166/318 (52%), Gaps = 16/318 (5%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW +  I    ++KK Y     ++ +K  +  N  KI  HN+  + G   Y L  NH  
Sbjct: 28  EEWSLFKI----QFKKLYEDIKEETFRKKVYLDNKLKIAGHNKLYESGEETYALEMNHFG 83

Query: 64  DLHPRHYIKEMTRLTHSRI--RRTLVRSPE----SNESVLIPDHLDWREKGFITPDWNQE 117
           DL    Y K M     S     R            +E+V+IP  +DWR+KG++TP  NQ 
Sbjct: 84  DLMQHEYTKMMNGFKPSLAGGDRNFTNDEAVTFLKSENVVIPKSVDWRKKGYVTPVKNQG 143

Query: 118 DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177
            CG+C++FS   +++GQ F+ T  +  LS Q ++DCS   GN GC GG +     Y++  
Sbjct: 144 QCGSCWSFSATGSLEGQHFRKTGVLVSLSEQNLIDCSRKYGNNGCEGGLMDLAFKYIKSN 203

Query: 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
            GL  E+ YPY+ +   C++   N       +  +P  DE AL   LATVGP++++I+AS
Sbjct: 204 KGLDTEKSYPYEAEDDKCRYNPENSGATDKGFVDIPEGDEDALMHALATVGPVSIAIDAS 263

Query: 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLK 292
              FQ Y  G++ +  C+S  ++H +L VG+  +      WI+KN W   WGD GY+ + 
Sbjct: 264 SEKFQFYKKGVFYNPRCSSTELDHGVLAVGFGSDKKGGDYWIVKNSWGKTWGDEGYIMMA 323

Query: 293 RG-NNRCGIANYAVYALI 309
           R   N CG+A+ A Y L+
Sbjct: 324 RNKKNNCGVASSASYPLV 341


>gi|340368358|ref|XP_003382719.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 329

 Score =  200 bits (508), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 164/303 (54%), Gaps = 19/303 (6%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY----- 70
           KY K Y  K T+  +++ W+SN K +  HN  + +   G+T+  N  +DL    +     
Sbjct: 29  KYNKAYETKETELARQVIWESNKKFVENHNANSDK--FGFTVAMNEFADLGAGEFANIYN 86

Query: 71  --IKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
             I       ++   +  VRS     +  + D +DWR+ G +T   NQ  CGAC+AFS  
Sbjct: 87  GIIPHPPSYNNTNTFKRTVRS-----TFALADSVDWRKSGAVTGVKNQGKCGACWAFSAT 141

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++GQ F +T  +  LS QQ++DCS   GN GC GG + N   Y++   G M EE YPY
Sbjct: 142 GALEGQHFINTGTLISLSEQQLMDCSSSFGNNGCKGGLMDNAFRYLETVAGDMTEEAYPY 201

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
             +   C++      V  + +  +P  DE AL+  +AT+GPI+VSIN+   +FQLY  G+
Sbjct: 202 LAEVGTCRYNSSEAKVKNTVYKDIPEGDEDALQEAVATIGPISVSINSEHSSFQLYDQGV 261

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           Y +  C+S  ++H +L++GY      + W++KN W  +WG +GY+ + R   N CGIA  
Sbjct: 262 YYEPTCSSSKLDHGVLVIGYGTSDNNDYWLVKNSWGTNWGMDGYIMMSRNKENNCGIATR 321

Query: 304 AVY 306
           A Y
Sbjct: 322 ASY 324


>gi|146217394|gb|ABQ10739.1| cathepsin L [Penaeus monodon]
          Length = 341

 Score =  199 bits (507), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 167/307 (54%), Gaps = 13/307 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           ++ K Y  +  +S +   +  N  KI  HN+   QG H Y L  N   D+    ++  M 
Sbjct: 35  EHSKKYDSEVEESFRMKIFTENKHKIANHNKGFAQGHHTYKLSMNKYGDMLHHEFVSTMN 94

Query: 76  --RLTHSRIRR-----TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
             R  H+   +     T     E ++ V +P ++DWR KG +TP  +Q  CG+C+AFS  
Sbjct: 95  GFRGNHTGGYKNNRAYTGATFIEPDDDVQLPKNVDWRTKGAVTPIKDQGQCGSCWAFSAT 154

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++GQ F+ T ++  LS Q +VDCS   GN GC GG + N   YV+  GG+  EE YPY
Sbjct: 155 GALEGQTFRKTGQLVSLSEQNLVDCSRKFGNNGCNGGLMDNAFEYVKENGGIDTEESYPY 214

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
             +   C +       +   +  +    EHALK  +ATVGP++V+I+AS  +FQ Y+ G+
Sbjct: 215 DAEDEKCHYNPRAAGAEDKGFVDVREGSEHALKKAVATVGPVSVAIDASHESFQFYSHGV 274

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           Y +  C+ + ++H +L+VGY  +      W++KN W   WGD GY+ + R  +N+CGIA+
Sbjct: 275 YIEPECSPEMLDHGVLVVGYGIDDDGTDYWLVKNSWGTTWGDQGYVKMARNRDNQCGIAS 334

Query: 303 YAVYALI 309
            A + L+
Sbjct: 335 SASFPLV 341


>gi|74149661|dbj|BAE36450.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  199 bits (507), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 158/286 (55%), Gaps = 14/286 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVRSPES 92
           W+ N + I  HN E   G HG+++  N   D+    + + +    H + ++  L + P  
Sbjct: 52  WEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLM 111

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
              + IP  +DWREKG +TP  NQ  CG+C+AFS +  ++GQ+F  T ++  LS Q +VD
Sbjct: 112 ---LKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 168

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +     Y++  GGL  EE YPY+ K   CK+ R    V   +  V 
Sbjct: 169 CSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEFAVANGTGFVD 227

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
            PQ E AL   +ATVGPI+V+++AS  + Q Y+SGIY +  C+S  ++H +LLVGY    
Sbjct: 228 IPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEG 287

Query: 273 --------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   W++KN W   WG  GY+ + K  +N CG+A  A Y ++
Sbjct: 288 TDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|443708542|gb|ELU03619.1| hypothetical protein CAPTEDRAFT_17807 [Capitella teleta]
          Length = 350

 Score =  199 bits (507), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 177/319 (55%), Gaps = 24/319 (7%)

Query: 11  IFPQKKYKKDYRK-------KATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           + P +K  +D++        +  +S++K  +++N KKI  HN   +QG   Y +  N  +
Sbjct: 36  LVPFEKLWQDFKTVHERTYGETEESQRKEVFRNNLKKIQAHNHLHEQGKSPYRMGINQFA 95

Query: 64  DLHPRHYIKEMTRLTHSRIRRTLVR--------SPESNESVLIPDHLDWREKGFITPDWN 115
           D+    +   M     +   RT VR        SP     V +P  +DWR++G++TP  N
Sbjct: 96  DMEANEFASIMNGFRMNN--RTEVRDHLHANYISPAI--PVSVPAEVDWRKEGYVTPVKN 151

Query: 116 QEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQ 175
           Q  CG+C+AFS   +++GQ F+ T ++  LS Q +VDCS   GN GC GG +     Y++
Sbjct: 152 QGQCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSTSYGNEGCNGGIVDYAFQYIK 211

Query: 176 FAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSIN 235
              G   E  YPY+     C+FK   +    + ++ LP  DE  +K  +A VGP++V+I+
Sbjct: 212 DNDGDDTEACYPYEAVDGTCRFKSVCVGATCTGYTDLPKGDEAKMKEAVALVGPVSVAID 271

Query: 236 ASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYL 291
           AS  +FQ+Y SGIY ++ C+   ++HA+L+VGY     ++ W++KN W   WGD GY+ +
Sbjct: 272 ASHSSFQMYQSGIYVEQECSPKQLDHAVLVVGYGTEQGQDYWLVKNSWGTTWGDEGYIKM 331

Query: 292 KRG-NNRCGIANYAVYALI 309
            R  +N+CGIA+ A Y L+
Sbjct: 332 ARNMDNQCGIASQASYPLV 350


>gi|74151179|dbj|BAE27712.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  199 bits (507), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 158/286 (55%), Gaps = 14/286 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVRSPES 92
           W+ N + I  HN E   G HG+++  N   D+    + + +    H + ++  L + P  
Sbjct: 52  WEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLM 111

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
              + IP  +DWREKG +TP  NQ  CG+C+AFS +  ++GQ+F  T ++  LS Q +VD
Sbjct: 112 ---LKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 168

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +     Y++  GGL  EE YPY+ K   CK+ R    V   +  V 
Sbjct: 169 CSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVD 227

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
            PQ E AL   +ATVGPI+V+++AS  + Q Y+SGIY +  C+S  ++H +LLVGY    
Sbjct: 228 IPQQEEALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEG 287

Query: 273 --------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   W++KN W   WG  GY+ + K  +N CG+A  A Y ++
Sbjct: 288 TDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|402770505|gb|AFQ98387.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  199 bits (507), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 166/300 (55%), Gaps = 8/300 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT- 75
           +KK Y+    +  +   +  N   I  HN +  +GL  Y L  N   DL    + +    
Sbjct: 34  HKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFNG 93

Query: 76  -RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            R T      T +     N+S L P  +DWR+KG +TP  +Q  CG+C+AFS   +++GQ
Sbjct: 94  HRGTRKTGGSTFLPPANVNDSSL-PKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQ 152

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
            F    E+  LS Q +VDCS   GN GC GG + +   Y++   G+  E+ YPY+     
Sbjct: 153 HFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE 212

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C+FK+ ++    + +  +    E  LK  +ATVGPI+V+I+AS  +FQLY+ G+YD+  C
Sbjct: 213 CRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPEC 272

Query: 255 TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
           +S+ ++H +L+VGY     +  W++KN W+  WGD GY+ + R  NN+CGIA+ A Y L+
Sbjct: 273 SSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332


>gi|348542774|ref|XP_003458859.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 330

 Score =  199 bits (507), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 112/303 (36%), Positives = 173/303 (57%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK--- 72
           K++K Y   + ++++K  W +N K +  HN  A  GL  + L   + +D+    Y K   
Sbjct: 32  KFEKSYDSPSEETQRKQIWLNNRKLVLKHNALADLGLKSFRLGMTYFADMENEEYKKLGC 91

Query: 73  -EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
                 +  R   T  R P+     ++PD +DWR++G++T   +Q++CG+C+AFS   A+
Sbjct: 92  LGSFNASLPRHGSTFRRLPKG---TVLPDTVDWRKQGYVTHVKDQKECGSCWAFSATGAL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ FK T ++  LS QQ+VDCS    N GC GG       Y+++ GGL  EE Y Y+ K
Sbjct: 149 EGQYFKKTGKLVSLSEQQLVDCSRKFRNNGCEGGEPHWAFQYIRYNGGLDTEESYHYEAK 208

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C +   ++    S +  + P  E ALK  +AT+GPI+V+I+ S  +FQLY SG+YD+
Sbjct: 209 DGQCHYNPDSVGAKCSGYVNVSPF-EDALKEAVATIGPISVAIDISRVSFQLYHSGVYDE 267

Query: 252 EACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             C++  +NHA+L VGY T N    W++KN W   WG+ GY+ + R  +N+CGIA  A Y
Sbjct: 268 PWCSNINLNHAVLAVGYGTENGHDYWLVKNSWGSEWGNKGYIKMTRNKDNQCGIATEASY 327

Query: 307 ALI 309
            L+
Sbjct: 328 PLV 330


>gi|345309264|ref|XP_001507503.2| PREDICTED: cathepsin L1-like [Ornithorhynchus anatinus]
          Length = 335

 Score =  199 bits (507), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 171/310 (55%), Gaps = 26/310 (8%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSD-----LHPR--H 69
           + K+Y  +A +  ++  W+ N + I  HN+E  QG H Y L  NH  D     LH R   
Sbjct: 35  HGKNYSVEAEEVFRRAAWEKNVRVIERHNEEMSQGKHSYRLAMNHFGDQTNEELHERLNG 94

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           +  ++     S   +   RS  S E    P+ +DWR KG++TP  NQ  CG+C+AFS   
Sbjct: 95  FRPDLGGALRSGREQARFRSKTSWEG---PEEVDWRTKGYVTPVKNQGLCGSCWAFSATG 151

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++  +FK+T ++  LS Q +VDCS   GN+GC GG       YV+  GG+  E+ YPY 
Sbjct: 152 ALEALVFKTTGKMVSLSEQNLVDCSWRQGNVGCRGGQYIGAFEYVRANGGIDAEDLYPYL 211

Query: 190 GKQSI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           G+  I C++       + +S+ V+   +E AL+  +ATVGP++V+++A P  F  Y SG 
Sbjct: 212 GRDDISCRYSLQGKAGNCTSYMVVDQDNEQALEQAVATVGPVSVAVDARP--FFFYHSG- 268

Query: 249 YDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCG 299
                CT   VNHAML VGY         ++ WILKN WS  WG+ GYM L +G NN CG
Sbjct: 269 --SSRCTQK-VNHAMLAVGYGTSKEPGGGQDYWILKNSWSERWGEQGYMRLLKGANNHCG 325

Query: 300 IANYAVYALI 309
           +A+ A + ++
Sbjct: 326 VASVASFPVL 335


>gi|118424553|gb|ABK90824.1| cathepsin L-like cysteine proteinase [Spodoptera exigua]
          Length = 344

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 106/312 (33%), Positives = 165/312 (52%), Gaps = 18/312 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           ++ K Y  +  D  +   +  N  +I  HNQ  +Q L  Y L+ N  +D+    ++  M 
Sbjct: 33  EHSKQYDSEVEDKFRMKIYVENKHRITKHNQRFEQRLVSYKLKPNKYADMLHHEFVHTMN 92

Query: 76  RLTHS-----RIRRTLVRSPESNESVLI-------PDHLDWREKGFITPDWNQEDCGACY 123
               +     R +    +  +   +  I       PDH+DWR+KG +T   +Q  CG+C+
Sbjct: 93  GFNKTAKHGGRNKNVHGKGHDGRAATFIAPAHVSYPDHVDWRKKGAVTDVKDQGKCGSCW 152

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKE 183
           AFS   A++GQ F+ T  +  LS Q ++DCS   GN GC GG + N   Y++  GG+  E
Sbjct: 153 AFSTTGALEGQHFRKTGYLVSLSEQNLIDCSAAYGNNGCNGGLMDNAFKYIKDNGGIDTE 212

Query: 184 EDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
           + YPY+     C++       D   +  +P  DE  L   +ATVGPI+V+I+AS  TFQ 
Sbjct: 213 KSYPYEAVDDKCRYNPKESGADDVGFVDIPQGDEEKLMQAVATVGPISVAIDASQETFQF 272

Query: 244 YASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNR 297
           Y+ G+Y DE C+S  ++H +++VGY       + W++KN W   WG+ GY+ + R  NN 
Sbjct: 273 YSKGVYYDENCSSTDLDHGVMVVGYGTEEDGSDDWLVKNSWGRSWGELGYIKMARNKNNH 332

Query: 298 CGIANYAVYALI 309
           CGIA+ A Y L+
Sbjct: 333 CGIASSASYPLV 344


>gi|403302730|ref|XP_003942006.1| PREDICTED: cathepsin S isoform 1 [Saimiri boliviensis boliviensis]
          Length = 339

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 164/303 (54%), Gaps = 11/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 41  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 100

Query: 74  MTRLTHSRIRRTLVR--SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           M+ L   R+     R  + +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A+
Sbjct: 101 MSSL---RVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGAL 157

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           + Q+   T ++  LS Q +VDCS   GN GC GG +     Y+    G+  E  YPYK  
Sbjct: 158 EAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKAT 217

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP+ V ++AS  +F LY SG+Y D
Sbjct: 218 DQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYD 277

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            ACT   VNH +L++GY     +  W++KN W  ++G+ GY+ + R   N CGIA+Y  Y
Sbjct: 278 PACTQK-VNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKGNHCGIASYPSY 336

Query: 307 ALI 309
             I
Sbjct: 337 PEI 339


>gi|12847813|dbj|BAB27719.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 158/286 (55%), Gaps = 14/286 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVRSPES 92
           W+ N + I  HN E   G HG+++  N   D+    + + +    H + ++  L + P  
Sbjct: 52  WEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLM 111

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
              + IP  +DWREKG +TP  NQ  CG+C+AFS +  ++GQ+F  T ++  LS Q +VD
Sbjct: 112 ---LKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 168

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +     Y++  GGL  EE YPY+ K   CK+ R    V   +  V 
Sbjct: 169 CSHAQGNQGCNGGLMDYAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVD 227

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
            PQ E AL   +ATVGPI+V+++AS  + Q Y+SGIY +  C+S  ++H +LLVGY    
Sbjct: 228 IPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEG 287

Query: 273 --------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   W++KN W   WG  GY+ + K  +N CG+A  A Y ++
Sbjct: 288 TDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|62510453|sp|Q8HY82.1|CATS_SAIBB RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497536|gb|AAO13008.1| cathepsin S preproprotein [Saimiri boliviensis]
          Length = 330

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 164/303 (54%), Gaps = 11/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRLTHSRIRRTLVR--SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           M+ L   R+     R  + +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A+
Sbjct: 92  MSSL---RVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGAL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           + Q+   T ++  LS Q +VDCS   GN GC GG +     Y+    G+  E  YPYK  
Sbjct: 149 EAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKAT 208

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP+ V ++AS  +F LY SG+Y D
Sbjct: 209 DQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYD 268

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            ACT   VNH +L++GY     +  W++KN W  ++G+ GY+ + R   N CGIA+Y  Y
Sbjct: 269 PACTQK-VNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKGNHCGIASYPSY 327

Query: 307 ALI 309
             I
Sbjct: 328 PEI 330


>gi|2239109|emb|CAA70694.1| cathepsin S-like cysteine proteinase [Heterodera glycines]
          Length = 353

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/278 (38%), Positives = 157/278 (56%), Gaps = 8/278 (2%)

Query: 39  KKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLI 98
           K I  HN   ++G   + +  NHL    P  Y +       S  +R  + +   N S L 
Sbjct: 77  KFIDAHNLAFEKGEVSFKVAPNHLMHFTPAQYNRIRGLQMRSNRQRHNMATLAGNSSTL- 135

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF-KSTSEIEELSIQQVVDCSIIS 157
           P+ LDWREKG +T   +Q DCG+C+AFS   AI+G +  K  S+I  LS Q +VDCS   
Sbjct: 136 PEKLDWREKGAVTEVKDQGDCGSCWAFSATGAIEGALAQKKASKIISLSEQNLVDCSSKY 195

Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
           GN GC GG + +   YV+   GL  EE YPY+     C+FK   +   + S+  L   DE
Sbjct: 196 GNEGCDGGLMDSAFEYVRDNNGLDTEESYPYEAVTGKCQFKNETVGGTVVSFKDLKKGDE 255

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----- 272
             LK+ +AT+GPI+V+++AS  +FQ Y +G+Y +  C++ Y++H +LLVGY  +      
Sbjct: 256 EQLKIAVATIGPISVALDASNLSFQFYKTGVYYERWCSNRYLDHGVLLVGYGTDETHGDY 315

Query: 273 WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           W++KN W  HWG+NGY+ + R   N CGIA  A Y ++
Sbjct: 316 WLVKNSWGPHWGENGYIRIARNKQNHCGIATMASYPVV 353


>gi|291398027|ref|XP_002715626.1| PREDICTED: cathepsin S [Oryctolagus cuniculus]
          Length = 331

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 166/304 (54%), Gaps = 12/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y +  NHL+D+     +  
Sbjct: 32  KKAYGKQYKEKNEEAARRLIWEKNLKFVTLHNLEHSMGMHSYDVGMNHLADMTSEEVVSL 91

Query: 74  MT--RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           M+  R+ H   R    +    N +  +PD +DWRE+G +T    Q  CGAC+AFS   A+
Sbjct: 92  MSSLRIPHQWPRNVTYKL---NPNQKLPDSVDWRERGCVTEVKYQGSCGACWAFSAVGAL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           + Q+   T  +  LS Q +VDCS    GN GC GG +     Y+    G+  E  YPYK 
Sbjct: 149 EAQLKLKTGNLVSLSAQNLVDCSTTKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKA 208

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +   +     S ++ LP   E ALK  +A  GP++V+I+AS  +F LY SG+Y 
Sbjct: 209 MDQKCHYDSKHRAATCSKYTELPFGSEEALKEAVANKGPVSVAIDASHSSFFLYRSGVYY 268

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
           + +CT + VNH +L VGY     ++ W++KN W  H+G+ GY+ + R + N CGIANY  
Sbjct: 269 EPSCTQN-VNHGVLAVGYGNLKGKDYWLVKNSWGIHFGEQGYIRMARNSKNHCGIANYPS 327

Query: 306 YALI 309
           Y  I
Sbjct: 328 YPEI 331


>gi|6753558|ref|NP_034114.1| cathepsin L1 preproprotein [Mus musculus]
 gi|115742|sp|P06797.2|CATL1_MOUSE RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; AltName: Full=p39 cysteine proteinase;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|53047|emb|CAA29470.1| unnamed protein product [Mus musculus]
 gi|309186|gb|AAA37445.1| preprocysteine proteinase [Mus musculus]
 gi|12832050|dbj|BAB21945.1| unnamed protein product [Mus musculus]
 gi|26340196|dbj|BAC33761.1| unnamed protein product [Mus musculus]
 gi|45768760|gb|AAH68163.1| Cathepsin L [Mus musculus]
 gi|74139700|dbj|BAE31701.1| unnamed protein product [Mus musculus]
 gi|74146632|dbj|BAE41323.1| unnamed protein product [Mus musculus]
 gi|74151584|dbj|BAE41141.1| unnamed protein product [Mus musculus]
 gi|74185397|dbj|BAE30172.1| unnamed protein product [Mus musculus]
 gi|74197196|dbj|BAE35143.1| unnamed protein product [Mus musculus]
 gi|74203006|dbj|BAE26206.1| unnamed protein product [Mus musculus]
 gi|74219606|dbj|BAE29572.1| unnamed protein product [Mus musculus]
 gi|148684295|gb|EDL16242.1| cathepsin L [Mus musculus]
          Length = 334

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 158/286 (55%), Gaps = 14/286 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVRSPES 92
           W+ N + I  HN E   G HG+++  N   D+    + + +    H + ++  L + P  
Sbjct: 52  WEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLM 111

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
              + IP  +DWREKG +TP  NQ  CG+C+AFS +  ++GQ+F  T ++  LS Q +VD
Sbjct: 112 ---LKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 168

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +     Y++  GGL  EE YPY+ K   CK+ R    V   +  V 
Sbjct: 169 CSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVD 227

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
            PQ E AL   +ATVGPI+V+++AS  + Q Y+SGIY +  C+S  ++H +LLVGY    
Sbjct: 228 IPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEG 287

Query: 273 --------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   W++KN W   WG  GY+ + K  +N CG+A  A Y ++
Sbjct: 288 TDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|74213650|dbj|BAE35627.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 158/286 (55%), Gaps = 14/286 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVRSPES 92
           W+ N + I  HN E   G HG+++  N   D+    + + +    H + ++  L + P  
Sbjct: 52  WEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLM 111

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
              + IP  +DWREKG +TP  NQ  CG+C+AFS +  ++GQ+F  T ++  LS Q +VD
Sbjct: 112 ---LKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 168

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +     Y++  GGL  EE YPY+ K   CK+ R    V   +  V 
Sbjct: 169 CSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVD 227

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
            PQ E AL   +ATVGPI+V+++AS  + Q Y+SGIY +  C+S  ++H +LLVGY    
Sbjct: 228 IPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEG 287

Query: 273 --------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   W++KN W   WG  GY+ + K  +N CG+A  A Y ++
Sbjct: 288 TDSNKNKYWLVKNSWGSEWGMEGYIEIAKDRDNHCGLATAASYPVV 333


>gi|74200292|dbj|BAE22939.1| unnamed protein product [Mus musculus]
          Length = 308

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 158/286 (55%), Gaps = 14/286 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVRSPES 92
           W+ N + I  HN E   G HG+++  N   D+    + + +    H + ++  L + P  
Sbjct: 26  WEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLM 85

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
              + IP  +DWREKG +TP  NQ  CG+C+AFS +  ++GQ+F  T ++  LS Q +VD
Sbjct: 86  ---LKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 142

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +     Y++  GGL  EE YPY+ K   CK+ R    V   +  V 
Sbjct: 143 CSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVD 201

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
            PQ E AL   +ATVGPI+V+++AS  + Q Y+SGIY +  C+S  ++H +LLVGY    
Sbjct: 202 IPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEG 261

Query: 273 --------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   W++KN W   WG  GY+ + K  +N CG+A  A Y ++
Sbjct: 262 TDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 307


>gi|45822207|emb|CAE47500.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 326

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 165/303 (54%), Gaps = 20/303 (6%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY-----IKE 73
           K YR    + K+   +Q + +KI  HN +   GL  + L     +DL  + +     I  
Sbjct: 32  KSYRNYIEEQKRFTIFQGSLRKIENHNDKYDHGLSTFKLGVTKFADLTEKEFSDMLGISR 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
            T+ +  R+  +L    +      +P   DWREKG +T   +Q  CG+C++FS    ++G
Sbjct: 92  STKSSRPRVIHSLTPVKD------LPSKFDWREKGAVTEVKDQGSCGSCWSFSTTGTVEG 145

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
             F  T ++  LS Q +VDC+      GC+GG +   L Y++ AGG+M E DYPY+G   
Sbjct: 146 AYFLKTGKLVSLSEQNLVDCAK-EDCYGCSGGYMDKALEYIETAGGIMSENDYPYEGIDD 204

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+F    +   IS+++ +   DE  LK  +   GPI+V+I+AS   FQLY SGI DD +
Sbjct: 205 KCRFDSSKVAAKISNFTYIKKNDEDDLKNAVIAKGPISVAIDAS-FNFQLYDSGILDDSS 263

Query: 254 CTSDY--VNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           C SD+  +NH +L+VGY     ++ WI+KN W   WG +GY+++ R  NN+CGIA  A Y
Sbjct: 264 CYSDFNSLNHGVLVVGYGTEKEQDYWIVKNSWGADWGMDGYIWMSRNKNNQCGIATDATY 323

Query: 307 ALI 309
             I
Sbjct: 324 PTI 326


>gi|410519429|gb|AFV73398.1| cathepsin L [Haliotis discus hannai]
          Length = 326

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 170/313 (54%), Gaps = 11/313 (3%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           ++EW +  +    ++ K Y+    ++ +K  +    + I  HN EA +G+H + +  N  
Sbjct: 19  DREWGMFKV----RHNKQYKDNQEEAYRKGVFMKAVEYIQQHNLEADRGVHSFRVGINEY 74

Query: 63  SDLHPRHYIKEMTRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGA 121
           +D+    +++ M        R +     P SN   L P  +DWR KG++T   NQ  CG+
Sbjct: 75  ADMPNEEFVRVMNGYKMQEQRPKAPTYMPPSNVGDL-PATVDWRTKGYVTEVKNQGQCGS 133

Query: 122 CYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLM 181
           C+AFS   +++GQ FK  +++  LS Q +VDCS   GN+GC GG +     Y++   G+ 
Sbjct: 134 CWAFSSTGSLEGQTFKKYNKLISLSEQNLVDCSTEQGNMGCGGGLMDQAFTYIKVNDGID 193

Query: 182 KEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTF 241
            E  YPY+     C+F + N+  + + ++ +  + E  L+  +ATVGPIAV+I+AS  +F
Sbjct: 194 TETSYPYEAASGKCRFNKANVGANDTGYTDIKSKSESDLQSAVATVGPIAVAIDASHMSF 253

Query: 242 QLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NN 296
           QLY SG+Y    C+   ++H +L VGY  +S    W++KN W   WG  GY+ + R  +N
Sbjct: 254 QLYKSGVYHYIFCSQTRLDHGVLAVGYGTDSGKDYWLVKNSWGATWGQQGYIMMSRNRDN 313

Query: 297 RCGIANYAVYALI 309
            CGIA  A Y  +
Sbjct: 314 NCGIATQASYPTV 326


>gi|391226352|gb|AFM38108.1| cathepsin L [Patiria pectinifera]
          Length = 327

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 173/317 (54%), Gaps = 20/317 (6%)

Query: 3   NKEWIIIFIFPQKKY---KKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRE 59
           ++EW +     Q+KY   ++D+R+          W+ N+K +  HNQ    G   YT+  
Sbjct: 21  DQEWQMWKDNNQRKYGAEEEDFRR--------FVWEYNYKMVTEHNQRFALGHTTYTMAM 72

Query: 60  NHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDC 119
           N  +DL    + K+M      ++    V +    +   +P  +DWR KG++T   NQ  C
Sbjct: 73  NEFADLTSAEFTKKMNGFVMDKVPPKPVNT--FTDVSDLPTTVDWRTKGWVTGVKNQMQC 130

Query: 120 GACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSI-ISGNL-GCAGGSLRNTLNYVQFA 177
           G+C+A S   +++GQ F  T ++ ++S Q +VDC++  S N  GC GG++     YV   
Sbjct: 131 GSCWALSATGSLEGQTFNKTGKLPDISEQNLVDCAMKPSYNCHGCEGGTMNGAFQYVHDN 190

Query: 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
            G+  E  YPY+ +   C+F   N+V    + ++LP  DE AL++ +A VGPI+V+I+AS
Sbjct: 191 MGIDSESSYPYQAEDKKCRFNPANVVATDKTHTLLPAMDEKALQMAVAMVGPISVAIDAS 250

Query: 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR 293
             +FQ+Y  G+YD+  C+   ++H +L VGY     +  W++KN W   WG  GY+ + R
Sbjct: 251 HESFQMYHKGVYDEPMCSQTMLDHGVLAVGYGMEDDKAYWLVKNSWGKKWGMKGYIMMSR 310

Query: 294 -GNNRCGIANYAVYALI 309
             NN+CGIA  A Y L+
Sbjct: 311 FNNNQCGIATNASYPLV 327


>gi|254746340|emb|CAX16635.1| putative C1A cysteine protease precursor [Manduca sexta]
          Length = 342

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 174/327 (53%), Gaps = 25/327 (7%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW+   +   KKY  +   +    + K++ ++ HK I  HNQ  +QGL  Y L  N
Sbjct: 23  LVKEEWVAFKMQHDKKYDSEVEDRF---RMKIYAENKHK-IAKHNQLYEQGLVSYKLGPN 78

Query: 61  HLSDLHPRHYIKEMTRLTHSR------------IRRTLVRSPESNESVLIPDHLDWREKG 108
             +D+    +I+ M     +             +R      P     V  PDH+DW +KG
Sbjct: 79  KYTDMLHHEFIQAMNGYNRTAKHNKGLYGKKHDVRGATFIPPAH---VKYPDHVDWTKKG 135

Query: 109 FITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLR 168
            +T   +Q  CG+C+AFS   A++GQ F+ +  +  LS Q ++DCS   GN GC GG + 
Sbjct: 136 AVTEVKDQGKCGSCWAFSTTGALEGQHFRKSGYLVSLSEQNLIDCSSTYGNNGCNGGLMD 195

Query: 169 NTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVG 228
           N   Y++  GG+  E+ YPY+G    C++   N   +   +  +P  DE  L   +ATVG
Sbjct: 196 NAFKYIKDNGGIDTEKTYPYEGVDDKCRYNPKNSGAEDVGFVDIPSGDEEKLMQAVATVG 255

Query: 229 PIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHW 283
           P++V+I+AS ++FQ Y+ G+Y D  C+S  ++H +L+VGY  +      W++KN WS  W
Sbjct: 256 PVSVAIDASQNSFQFYSGGVYYDTECSSTDLDHGVLVVGYGTDEAGGDYWLVKNSWSRTW 315

Query: 284 GDNGYMYLKRG-NNRCGIANYAVYALI 309
           G+ GY+ + R  +N CGIA  A Y L+
Sbjct: 316 GELGYIKMARNRDNHCGIATDASYPLV 342


>gi|38147395|gb|AAR12010.1| cathepsin L-like proteinase [Triatoma infestans]
          Length = 328

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 173/311 (55%), Gaps = 11/311 (3%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW+      + ++ K Y+    +  +   ++ N +KI  HN+  + G   Y L+ NH  
Sbjct: 24  EEWLAF----KAQFGKSYKNSFEELFRMNVYKENQRKIDEHNKRYENGEVSYKLKMNHFG 79

Query: 64  DLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACY 123
           DL  +H  K + +L  S  ++       +    L P  +DWR+KG +TP  +   CG+C+
Sbjct: 80  DLM-QHEFKALNKLKRSAKQQNSGEVFRATGGKL-PAKVDWRQKGAVTPVKDPGQCGSCW 137

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKE 183
           AFS   ++ GQ+F    ++  LS QQ+VDCS   GN GC GG +     Y++  GG+  E
Sbjct: 138 AFSSTGSLGGQLFLKNKKLVSLSEQQLVDCSGNYGNDGCDGGIMVQAFQYIKGNGGIDTE 197

Query: 184 EDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
             YPY+ +   C++K  ++      +  +   DE+ALK  +A +GPI+V+I+A   +FQ 
Sbjct: 198 GSYPYEAEDDKCRYKTKSVAGTDKGYVDIAQGDENALKEAVAEIGPISVAIDAGNLSFQF 257

Query: 244 YASGIYDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRC 298
           Y+ GIYD+  C++  ++H +L+VGY T N    W++KN W   WG+NGY+ + R  NN C
Sbjct: 258 YSEGIYDEPFCSNTELDHGVLVVGYGTENGQDYWLVKNSWGPSWGENGYIKIARNHNNHC 317

Query: 299 GIANYAVYALI 309
           GIA+ A Y ++
Sbjct: 318 GIASMASYPIV 328


>gi|320169658|gb|EFW46557.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 324

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/296 (34%), Positives = 162/296 (54%), Gaps = 11/296 (3%)

Query: 21  YRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL-HPRHYIKEMT-RLT 78
           Y     ++ ++  +++N   I  HN E     H Y L  N  +DL +P    K +  R  
Sbjct: 33  YATVGEETARRGIYRANLDFIEKHNSEG----HSYKLAVNKFADLTYPEFAAKYLGLRFD 88

Query: 79  HSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKS 138
            +   ++   S      V +PD +DWR  G +TP  +Q  CG+C++FS   +++GQ  + 
Sbjct: 89  ATNATKSFAASTYLPRMVSLPDSVDWRTAGIVTPIKDQGQCGSCWSFSTTGSVEGQHARK 148

Query: 139 TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFK 198
           T ++  LS Q +VDCS   GN GC GG +     Y+    G+  E  YPY  +   C+F 
Sbjct: 149 TGQLVSLSEQNLVDCSSAQGNAGCNGGLMDQAFQYIISNNGIDTESSYPYTAQDGTCQFN 208

Query: 199 RPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDY 258
             N+   ++S+  +    E  L+  +ATVGPI+V+I+AS  +FQ Y+SG+Y++ AC+S  
Sbjct: 209 SANVGATVASYQDIASGSESDLQNAVATVGPISVAIDASQPSFQFYSSGVYNEPACSSSQ 268

Query: 259 VNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
           ++H +L VGY    + + W++KN W   WG +GY+++ R  NN+CGIA  A Y L+
Sbjct: 269 LDHGVLAVGYGTSGSSDYWLVKNSWGTSWGQSGYIWMTRNSNNQCGIATAASYPLV 324


>gi|162138968|ref|NP_001104662.1| uncharacterized protein LOC567623 precursor [Danio rerio]
 gi|158254065|gb|AAI54241.1| Zgc:174153 protein [Danio rerio]
          Length = 336

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 162/292 (55%), Gaps = 14/292 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    + + M    H   R +  + 
Sbjct: 47  RRMIWEENLRKIEQHNFEYSYGNHTFKMGMNQFGDMTNEEFRQAMNGYKHDPNRTS--QG 104

Query: 90  PESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
           P   E      P  +DWR++G++TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S 
Sbjct: 105 PLFMEPSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSE 164

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDI 206
           Q +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V   
Sbjct: 165 QNLVDCSRPQGNQGCNGGLMDLAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKS 224

Query: 207 SSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLV 266
           + +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + AC+S  ++HA+L+V
Sbjct: 225 TGFVDIPSGNEPALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACSSSRLDHAVLVV 284

Query: 267 GYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           GY            WI+KN WS  WGD GY+Y+ K  NN CG+A  A Y L+
Sbjct: 285 GYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGVATKASYPLM 336


>gi|299507656|gb|ADJ21807.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 160/293 (54%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT---RLTHSRIRRTL 86
           +++ W+ N KKI  HN E   G H Y L  NH  D+    + + M    R +  + + +L
Sbjct: 47  RRMVWEKNLKKIELHNLEHSMGEHTYRLGMNHFGDMTHEEFRQIMNGYKRKSERKFKGSL 106

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E+   P  +DWR+ G++TP  +Q  CG+C+AFS   A++GQ F+ T ++  LS
Sbjct: 107 FMEPNFLEA---PRSVDWRDNGYVTPVKDQGQCGSCWAFSTTGAMEGQHFRKTGKLVSLS 163

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y++   GL  E+ YPY G     C +       +
Sbjct: 164 EQNLVDCSRPEGNEGCNGGLMDQAFQYIKDNQGLDSEDSYPYLGTDDQPCHYDPKYNSAN 223

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L+
Sbjct: 224 DTGFIDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLV 283

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 284 VGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 336


>gi|226821421|gb|ACO82386.1| cathepsin L-like protein [Lutjanus argentimaculatus]
          Length = 301

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 158/293 (53%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT---RLTHSRIRRTL 86
           +++ W+ N KKI  HN E   G H Y L  NH  D+    + + M    R    +   +L
Sbjct: 12  RRMVWEKNLKKIEMHNLEHSMGTHSYRLGMNHFGDMTHEEFRQIMNGYKRKPQRKFTGSL 71

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E+   P  +DWR+ G++TP  +Q  CG+C+AFS   A++GQ F+ T ++  LS
Sbjct: 72  FMEPNFLEA---PRAVDWRDNGYVTPVKDQGQCGSCWAFSTTGALEGQHFRKTGKLVSLS 128

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y++   GL  E+ YPY G     C +       +
Sbjct: 129 EQNLVDCSRPEGNEGCNGGLMDQAFQYIKDNQGLDSEDSYPYLGTDDQPCHYDPKYNSAN 188

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L+
Sbjct: 189 DTGFVDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKDCSSEELDHGVLV 248

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 249 VGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 301


>gi|21953244|emb|CAD42716.1| putative cathepsin L [Myzus persicae]
          Length = 341

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 169/322 (52%), Gaps = 24/322 (7%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW +     + ++KK Y     ++ +K  +  N  KI  HN+  + G   Y L  NH  
Sbjct: 28  EEWSLF----KMQFKKLYEDIKEETFRKKVYLDNKLKIARHNKLYESGEETYALEMNHFG 83

Query: 64  DLHPRHYIKEMTRLTHSRIRR----------TLVRSPESNESVLIPDHLDWREKGFITPD 113
           DL    Y K M     S              T ++S    E+V+IP  +DWR+KG++TP 
Sbjct: 84  DLMQHEYSKMMNGFKPSLAGGDSNFTNDEGVTFLKS----ENVVIPKSIDWRKKGYVTPV 139

Query: 114 WNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNY 173
            NQ  CG+C++FS   +++GQ F+ T  +  LS Q ++DCS   GN GC GG +     Y
Sbjct: 140 KNQGQCGSCWSFSATGSLEGQHFRKTGVLVSLSEQNLIDCSRKYGNNGCEGGLMDLAFKY 199

Query: 174 VQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVS 233
           ++   GL  E+ YPY+ +   C++   N     + +  +P  DE AL   LATVGP++++
Sbjct: 200 IKSNKGLDTEKSYPYEAEDDKCRYNPDNSGATDNGFVDIPEGDEEALMHALATVGPVSIA 259

Query: 234 INASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGY 288
           I+AS   FQ Y  G++ +  C+S  ++H +L VG+  +      WI+KN W   WGD GY
Sbjct: 260 IDASSEKFQFYKKGVFYNPRCSSTELDHGVLAVGFRTDKKGGDYWIVKNSWGKTWGDEGY 319

Query: 289 MYLKRG-NNRCGIANYAVYALI 309
           + + R   N CG+A+ A Y L+
Sbjct: 320 IMMARNKKNNCGVASSASYPLV 341


>gi|91992508|gb|ABE72970.1| cathepsin L [Aedes aegypti]
          Length = 339

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 174/322 (54%), Gaps = 17/322 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW    +  +K Y  +  ++    + K++ Q+ HK I  HNQ    G   Y LR N
Sbjct: 22  LVKEEWNAFKLQHRKNYDSETEERI---RLKIYVQNKHK-IAKHNQRFDLGQEKYRLRVN 77

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTL--VRSPE-----SNESVLIPDHLDWREKGFITPD 113
             +DL    +++ +     +  +++L  VR  E        +V +P  +DWR+KG +TP 
Sbjct: 78  KYADLLHEEFVQTVNGFNRTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPV 137

Query: 114 WNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNY 173
            +Q  CG+C++FS   A++GQ F+ T ++  LS Q +VDCS   GN GC GG +     Y
Sbjct: 138 KDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCNGGMMDYAFQY 197

Query: 174 VQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVS 233
           ++  GG+  E+ YPY+     C F    +      +  +P  DE ALK  LATVGP++++
Sbjct: 198 IKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYVDIPQGDEEALKKALATVGPVSIA 257

Query: 234 INASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGY 288
           I+AS  +FQ Y+ G+Y +  C S+ ++H +L VGY       + W++KN W   WGD GY
Sbjct: 258 IDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQGY 317

Query: 289 MYLKRG-NNRCGIANYAVYALI 309
           + + R  +N CG+A  A Y L+
Sbjct: 318 VKMARNHDNHCGVATCASYPLV 339


>gi|728637|emb|CAA59441.1| cathepsin l [Litopenaeus vannamei]
          Length = 326

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 155/282 (54%), Gaps = 8/282 (2%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           ++ N + I  HN   + G   +TL+ N   D+     +  M     +  RR        +
Sbjct: 47  FEQNQQFIDDHNARFENGEVTFTLQMNQFGDMTSEEIVATMNGFLGAPTRRPAAVLKADD 106

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
           E+  +P+ +DWR KG +TP  +Q+ CG+C+AFS   +++GQ F    ++  LS Q +VDC
Sbjct: 107 ET--LPEKVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDC 164

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GN+GC GG +     Y++   G+  E+ YPY+ +   C+F   N+    + +  + 
Sbjct: 165 SDKFGNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQDGKCRFDASNVGATDTGYVDVE 224

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
              E ALK  +AT+GPI+V I+AS  TF  Y +G+Y D+ C+S  ++H +L VGY  +  
Sbjct: 225 HGSESALKKAVATIGPISVGIDASQSTFHFYHTGVYHDDHCSSTMLDHGVLAVGYGSDEN 284

Query: 273 ----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               W++KN W+  WGD GY+ + R  NN CGIA+ A Y L+
Sbjct: 285 GGDFWLVKNSWNTSWGDKGYIKMSRNRNNNCGIASQASYPLV 326


>gi|157132324|ref|XP_001655999.1| cathepsin l [Aedes aegypti]
 gi|108881694|gb|EAT45919.1| AAEL002833-PA [Aedes aegypti]
          Length = 339

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 174/322 (54%), Gaps = 17/322 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW    +  +K Y  +  ++    + K++ Q+ HK I  HNQ    G   Y LR N
Sbjct: 22  LVKEEWNAFKLQHRKNYDSETEERI---RLKIYVQNKHK-IAKHNQRFDLGQEKYRLRVN 77

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTL--VRSPE-----SNESVLIPDHLDWREKGFITPD 113
             +DL    +++ +     +  +++L  VR  E        +V +P  +DWR+KG +TP 
Sbjct: 78  KYADLLHEEFVQTVNGFNRTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPV 137

Query: 114 WNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNY 173
            +Q  CG+C++FS   A++GQ F+ T ++  LS Q +VDCS   GN GC GG +     Y
Sbjct: 138 KDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCNGGMMDYAFQY 197

Query: 174 VQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVS 233
           ++  GG+  E+ YPY+     C F    +      +  +P  DE ALK  LATVGP++++
Sbjct: 198 IKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYVDIPQGDEEALKKALATVGPVSIA 257

Query: 234 INASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGY 288
           I+AS  +FQ Y+ G+Y +  C S+ ++H +L VGY       + W++KN W   WGD GY
Sbjct: 258 IDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQGY 317

Query: 289 MYLKRG-NNRCGIANYAVYALI 309
           + + R  +N CG+A  A Y L+
Sbjct: 318 VKMARNRDNHCGVATCASYPLV 339


>gi|52630917|gb|AAU84922.1| putative cathepsin L [Toxoptera citricida]
          Length = 341

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 169/325 (52%), Gaps = 24/325 (7%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW +  +    ++KK Y     ++ +K  +  N  KI  HN+  + G   Y L  N
Sbjct: 25  IIEEEWDLFKV----QFKKIYEDVKEEAFRKKVYLDNKLKIARHNKLYETGEETYALEMN 80

Query: 61  HLSDLHPRHYIKEMTRLTHSRI----------RRTLVRSPESNESVLIPDHLDWREKGFI 110
           H  DL    Y K M     S              T ++S    E+V+IP  +DWR+KG++
Sbjct: 81  HFGDLMQHEYTKMMNGFKPSLAGGDKNFTDDDAVTFLKS----ENVVIPKSIDWRKKGYV 136

Query: 111 TPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNT 170
           TP  NQ  CG+C++FS   +++GQ F+ T  +  LS Q ++DCS   GN GC GG +   
Sbjct: 137 TPVKNQGQCGSCWSFSATGSLEGQHFRKTGVLVSLSEQNLIDCSRKYGNNGCEGGLMDLA 196

Query: 171 LNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPI 230
             Y++   GL  E+ YPY+ +   C++   N       +  +P  DE AL   LATVGP+
Sbjct: 197 FKYIKSNKGLDTEKSYPYEAEDDKCRYNPENSGATDKGFVDIPEGDEDALVHALATVGPV 256

Query: 231 AVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGD 285
           +++I+AS   FQ Y  G++ +  C+S  ++H +L VGY  +      WI+KN W   WGD
Sbjct: 257 SIAIDASSEKFQFYKKGVFYNPRCSSTELDHGVLAVGYGTDHKGGDYWIVKNSWGKTWGD 316

Query: 286 NGYMYLKRG-NNRCGIANYAVYALI 309
            GY+ + R   N CG+A+ A Y L+
Sbjct: 317 QGYIMMARNKKNNCGVASSASYPLV 341


>gi|151573016|gb|ABS17683.1| cathepsin L-1 [Artemia persimilis]
          Length = 334

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 163/303 (53%), Gaps = 12/303 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK+Y  +  +  +   +  N  K+  HN   ++G   Y +  N   DL    +   M  
Sbjct: 34  HKKEYPSQLEEKFRMKIYLENKHKVAKHNILFEKGEKSYQVAMNKFGDLLHHEFRSIMNG 93

Query: 77  LTH-----SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
             H     SR   T      +N  V +P+ +DWREKG ITP  +Q  CG C+AFS   A+
Sbjct: 94  YQHKKQNSSRAESTFTFMEPAN--VEVPESVDWREKGAITPVKDQGQCGPCWAFSSTGAL 151

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F+ T ++  L  Q ++DCS   GN GC GG +     Y++   G+  E  YPY+ +
Sbjct: 152 EGQTFRKTGKLVSLREQNLIDCSGKYGNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAE 211

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
             +C++   N       +  +P  +E  LK  +ATVGP++V+I+AS  +FQ Y+ G+Y +
Sbjct: 212 DDVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYE 271

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +C SD ++H +L+VGY     ++ W++KN WS HWGD GY+ + R   N CG+A  A Y
Sbjct: 272 PSCDSDDLDHGVLVVGYGSDNGKDYWLVKNSWSEHWGDQGYIKIARNRKNHCGVATAASY 331

Query: 307 ALI 309
            L+
Sbjct: 332 PLV 334


>gi|342305188|dbj|BAK55648.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/293 (36%), Positives = 160/293 (54%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM---TRLTHSRIRRTL 86
           +++ W+ N KKI  HN E   G H Y L  NH  D+    + + M    R +  + + +L
Sbjct: 47  RRMVWEKNLKKIELHNLEHSMGEHTYRLGMNHFGDMTHEEFRQIMYGYKRKSERKFKGSL 106

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E+   P  +DWR+ G++TP  +Q  CG+C+AFS   A++GQ F+ T ++  LS
Sbjct: 107 FMEPNFLEA---PRSVDWRDNGYVTPVKDQGQCGSCWAFSTTGAMEGQHFRKTGKLVSLS 163

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y++   GL  E+ YPY G     C +       +
Sbjct: 164 EQNLVDCSRPEGNEGCNGGLMDQAFQYIKDNQGLDSEDSYPYLGTDDQPCHYDPKYNSAN 223

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L+
Sbjct: 224 DTGFIDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLV 283

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 284 VGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAASYPLV 336


>gi|390368662|ref|XP_780781.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/304 (34%), Positives = 167/304 (54%), Gaps = 10/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K Y     ++ +KL W+ N   +  HN +   G   Y L  N  +DL    ++  
Sbjct: 32  KNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGHFTYALGMNQFADLQNEEFVAM 91

Query: 74  MTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           MT    +   +    S    SN    +P  +DWR KG++TP  +Q  CG+C+AFS   ++
Sbjct: 92  MTGFRVNGTSKAAKGSTFLPSNNVDKLPKTVDWRTKGYVTPVKDQGQCGSCWAFSATGSL 151

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ FK T ++  LS Q +VDCS    N GC GG +     Y+  AGG+  E  Y Y+  
Sbjct: 152 EGQQFKKTGKLVSLSEQNLVDCSYR--NYGCHGGFMDRAFQYIIDAGGIDTEATYSYRAV 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C FK+ N+   ++ ++ +    E AL+  +A +GPI+V+I+AS   F+ Y SG+Y++
Sbjct: 210 DGNCHFKKANVGATVTGYTDVTSGSEKALQKAVAHIGPISVAIDASHKFFKFYKSGVYNE 269

Query: 252 EACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
             C++  + HA+L+VGY   S     WI+KN W+  WG NGY+++ R  +N+CGIA+ A 
Sbjct: 270 PGCSTTRLGHAVLVVGYGTTSDGTDYWIVKNSWAKTWGMNGYLWMSRNKDNQCGIASEAS 329

Query: 306 YALI 309
           Y ++
Sbjct: 330 YPMV 333


>gi|402770517|gb|AFQ98393.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 166/301 (55%), Gaps = 10/301 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y+    +  +   +  N   I  HN +  +GL  Y L  N   DL    + +    
Sbjct: 34  HKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFN- 92

Query: 77  LTHSRIRRTLVRS---PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
             H   R+T   S   P +     +P  +DWR+KG +TP  +Q  CG+C+AFS   +++G
Sbjct: 93  -GHHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEG 151

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q F    E+  LS Q +VDCS   GN GC GG + +   Y++   G+  E+ YPYK    
Sbjct: 152 QHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYKAVDG 211

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+FK+ ++    + +  +    E  LK  +ATVGPI+V+I+AS  +FQLY+ G+YD+  
Sbjct: 212 ECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPE 271

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYAL 308
           C+S+ ++H +L+VGY     +  W++KN W+  WGD GY+ + R  NN+CGIA+ A Y L
Sbjct: 272 CSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPL 331

Query: 309 I 309
           +
Sbjct: 332 V 332


>gi|4886998|gb|AAD32136.1|AF121837_1 cathepsin L [Mus musculus]
 gi|4887000|gb|AAD32137.1|AF121838_1 cathepsin L [Mus musculus]
 gi|4887002|gb|AAD32138.1|AF121839_1 cathepsin L [Mus musculus]
 gi|200501|gb|AAA39984.1| preprocathepsin L precursor [Mus musculus]
          Length = 334

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 158/286 (55%), Gaps = 14/286 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVRSPES 92
           W+ N + I  HN E   G HG+++  N   D+    + + +    H + ++  L + P  
Sbjct: 52  WEKNMRIIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLM 111

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
              + IP  +DWREKG +TP  NQ  CG+C+AFS +  ++GQ+F  T ++  LS Q +VD
Sbjct: 112 ---LKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 168

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +     Y++  GGL  EE YPY+ K   CK+ R    V   +  V 
Sbjct: 169 CSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVD 227

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
            PQ E AL   +ATVGPI+V+++AS  + Q Y+SGIY +  C+S  ++H +LLVGY    
Sbjct: 228 IPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEG 287

Query: 273 --------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   W++KN W   WG  GY+ + K  +N CG+A  A Y ++
Sbjct: 288 TDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|83715950|dbj|BAE54434.1| silicatein [Ephydatia fluviatilis]
          Length = 326

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 11/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  + K Y  +  + +K   W SN K I  HN  A     GYTL  NH  DL  R +  +
Sbjct: 28  KDSHGKSYTSELEELEKHSVWLSNRKYIEEHNAHADD--FGYTLAMNHFGDLSEREFKDK 85

Query: 74  MTRLTHSRIRRTL--VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
              LTH     T   V + ++ + +   D +DWR KG +T   NQ DCGA YAF+    +
Sbjct: 86  F--LTHEPGNYTSRGVATFKAPQGMKYVDSIDWRTKGAVTSVKNQGDCGASYAFAATGTM 143

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +G    S  +   LS Q ++DCS+  GN GC+GG     + YV   GG+  E  Y ++GK
Sbjct: 144 EGANALSNDKQVALSEQNIIDCSVAYGNHGCSGGDTYTAIKYVVDNGGIDTESSYSFRGK 203

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           QS C++   N     +    +    E  L   +ATVGP+AV+++A+ + F+ Y SG++D 
Sbjct: 204 QSSCQYNSKNSGASATGAVSISYGSESDLMSAVATVGPVAVAVDANTNAFRFYQSGVFDS 263

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
             C+S  +NHAML+ GY     ++ W++KN W  +WGD+GY+ + R   N+CGIA+ A+Y
Sbjct: 264 STCSSTKLNHAMLVTGYGSYNGKDYWLVKNSWGKYWGDSGYIMMVRNKYNQCGIASDALY 323

Query: 307 ALI 309
           +++
Sbjct: 324 SML 326


>gi|23306947|dbj|BAC16538.1| cathepsin L [Engraulis japonicus]
          Length = 336

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/293 (36%), Positives = 159/293 (54%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHS---RIRRTL 86
           +++ W+ N +KI  HN E   G H Y L  NH  D+    + + M    H    R++ +L
Sbjct: 47  RRVVWEKNLRKIEMHNLEHSMGAHSYRLGMNHFGDMTHEEFRQVMNGYKHKAERRVKGSL 106

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E+   P  +D+R+ G+ TP  +Q  CG+C+AFS   A++GQ+F+   ++  LS
Sbjct: 107 FMEPNFIEA---PKKIDYRDLGYATPVKDQGQCGSCWAFSTTGAMEGQLFREGGKLVSLS 163

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y++  GGL  E+ YPY G     C +       +
Sbjct: 164 EQNLVDCSRPEGNEGCNGGLMDQAFQYIKDNGGLDTEDAYPYLGTDDQDCHYDPKYSAAN 223

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY ++ C+S  ++H +L+
Sbjct: 224 DTGFVDIPEGKERALMKAVAAVGPVSVAIDAGHESFQFYHSGIYFEKECSSTELDHGVLV 283

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 284 VGYGFEGEDVDGKKYWIVKNSWSEKWGDEGYIYMAKDRKNHCGIATAASYPLM 336


>gi|432108215|gb|ELK33129.1| Cathepsin L1 [Myotis davidii]
          Length = 334

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/290 (37%), Positives = 161/290 (55%), Gaps = 13/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV-R 88
           ++  W+ N K I  HN+E      G+T+  N   D+    + + M    + + R   V R
Sbjct: 48  RRAVWEKNMKMIELHNREYSLRKQGFTMAMNAFGDMTNEEFRQVMNGFQNQKQRNGKVFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   +   IP  +DWR+KG++TP  NQ  CG+C+AFS   +++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFAQ---IPSSVDWRDKGYVTPVKNQGQCGSCWAFSATGSLEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG + N   YV+   GL  EE YPY  ++S     RP       +
Sbjct: 165 NLVDCSRAQGNEGCNGGLMDNAFQYVKDNKGLDTEESYPYLARESNTCNYRPEYSAANDT 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  PQ E AL   +ATVGPI+V+I+A   +FQ Y +GIY +  C+S  ++H +L+VGY
Sbjct: 225 GFVDIPQREKALLKAVATVGPISVAIDAGHSSFQFYNAGIYYEPNCSSKDLDHGVLVVGY 284

Query: 269 ------TRNS--WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
                 ++N+  WI+KN W   WG NGY+ + R  +N CGIA  A Y  +
Sbjct: 285 GSEGGESKNNKFWIVKNSWGSGWGMNGYVKMARDQSNHCGIATAASYPTV 334


>gi|91092014|ref|XP_970644.1| PREDICTED: similar to cathepsin-L-like cysteine peptidase 02
           [Tribolium castaneum]
 gi|270001249|gb|EEZ97696.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 168/307 (54%), Gaps = 17/307 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y  +  +  +   +  N  K+  HN+   QGL  + L  N  SD+    ++  +  
Sbjct: 34  HKKQYESETEERFRMKIFMENAHKVAKHNKLYAQGLVSFKLGVNKYSDMLNHEFVHTLNG 93

Query: 77  LTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
              S+   T +RS E +ES+         +P  +DWR+ G +TP  +Q  CG+C++FS  
Sbjct: 94  YNRSK---TPLRSGELDESITFIPPANVELPKQIDWRKLGAVTPVKDQGQCGSCWSFSTT 150

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            +++GQ F+ + ++  LS Q ++DCS   GN GC GG + N   Y++  GG+  E+ YPY
Sbjct: 151 GSLEGQHFRKSKKLVSLSEQNLIDCSEKYGNNGCNGGLMDNAFRYIKDNGGIDTEQSYPY 210

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           K +   C +K  N       +  +   DE  LK  +ATVGPI+V+I+AS  TFQ Y+ G+
Sbjct: 211 KAEDEKCHYKPRNKGATDRGFVDIESGDEEKLKAAVATVGPISVAIDASHPTFQQYSEGV 270

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           Y +  C+S+ ++H +L+VGY  +      W++KN W   WGD GY+ + R  +N CGIA 
Sbjct: 271 YYEPECSSEQLDHGVLVVGYGTDEDGNDYWLVKNSWGDSWGDQGYIKMARNRDNNCGIAT 330

Query: 303 YAVYALI 309
            A Y L+
Sbjct: 331 QASYPLV 337


>gi|351694995|gb|EHA97913.1| Cathepsin L1 [Heterocephalus glaber]
          Length = 278

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 102/277 (36%), Positives = 153/277 (55%), Gaps = 12/277 (4%)

Query: 39  KKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLI 98
           + I  HN E  +G HG+T+  N   D+    + + M    H + ++   ++ +    + +
Sbjct: 2   RMIELHNGEYSEGKHGFTMAMNAFGDMTSEEFKQVMNGFQHQKHKKG--KTYQEPLLLQL 59

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWR+KG++TP  NQ  CG+C+AFS   +++GQ+F+ T ++  LS Q +VDCS   G
Sbjct: 60  PKSVDWRKKGYVTPVKNQGQCGSCWAFSATGSLEGQMFRKTGQLVSLSEQNLVDCSQPQG 119

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG +     YV+   GL  E+ YPY+GK   C++K P +     +  V  PQ E 
Sbjct: 120 NQGCNGGLMDFAFEYVKENKGLESEKSYPYEGKDGSCRYK-PELSAANDTGFVDIPQREK 178

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS------ 272
           AL   +A  GPI+V+++A   +FQ Y  GIY D  C+S  +NH +L+VGY          
Sbjct: 179 ALMKAVAEKGPISVAVDAGLMSFQFYKDGIYFDPECSSKDLNHGVLVVGYGYEEVDTEKN 238

Query: 273 --WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             W++KN W   WG  GY+ + R  NN CGIA  A Y
Sbjct: 239 EYWLVKNSWGPEWGAEGYIKIARNRNNHCGIATAASY 275


>gi|402770507|gb|AFQ98388.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 166/300 (55%), Gaps = 8/300 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y+    +  +   +  N   I  HN +  +GL  Y L  N   DL    + +    
Sbjct: 34  HKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFNG 93

Query: 77  LTHSRIR--RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
              SR     T +     N+S L P  +DWR+KG +TP  +Q  CG+C+AFS   +++GQ
Sbjct: 94  YHGSRKSGGSTFLPPANVNDSSL-PKAVDWRKKGAVTPVKDQGQCGSCWAFSTTGSLEGQ 152

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
            F    E+  LS Q +VDCS   GN GC GG + +   Y++   G+  E+ YPY+     
Sbjct: 153 HFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGE 212

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C+FK+ ++    + +  +    E  LK  +ATVGPI+V+I+AS  +FQLY+ G+YD+  C
Sbjct: 213 CRFKKEDVGATDTGYVEIKAGCEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPEC 272

Query: 255 TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
           +S+ ++H +L+VGY     +  W++KN W+  WGD GY+ + R  NN+CGIA+ A Y L+
Sbjct: 273 SSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332


>gi|33520126|gb|AAQ21040.1| cathepsin L precursor [Branchiostoma belcheri tsingtauense]
          Length = 327

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 174/316 (55%), Gaps = 14/316 (4%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           + EW    +   K+Y  +Y     D+ +   +  N K +  HN+EA  G H + +R N  
Sbjct: 17  DNEWEAFKLLHGKQYN-EYE----DTARHAIFLENCKIVKQHNEEAAMGKHTFFMRMNKF 71

Query: 63  SDL---HPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDC 119
            DL     R  +     +  +R ++      ES   + + D +DWR+KG +T   NQE C
Sbjct: 72  GDLTNEEFRMLVIGSGLMQSNRTQQAEGGVFESIPGLKVNDTVDWRQKGAVTKVKNQEQC 131

Query: 120 GACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGG 179
           G+C+AFS   +++GQ F  +  +  LS Q +VDCS   GN GC GG +     Y++  GG
Sbjct: 132 GSCWAFSTTGSLEGQHFLKSGTLVSLSEQNLVDCSRKEGNKGCKGGLMDQAFKYIKTNGG 191

Query: 180 LMKEEDYPYKGK-QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASP 238
           +  EE YPYKG+ +  C++K       +SS+  +   DE ALK   AT+GPI+V I+AS 
Sbjct: 192 IDTEECYPYKGRDERKCEYKASCSGATLSSFVDVKTGDEDALKQASATIGPISVGIDASH 251

Query: 239 HTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG 294
            +FQLY  G+Y ++ C+S  ++H +L+VGY    T++ W++KN W   WG  GY+ + R 
Sbjct: 252 PSFQLYDHGVYHEKRCSSKKLDHGVLVVGYGTQSTKDYWLVKNSWGADWGMEGYIMMSRN 311

Query: 295 -NNRCGIANYAVYALI 309
            +N+CGIA  A Y ++
Sbjct: 312 KDNQCGIATQASYPVV 327


>gi|332375406|gb|AEE62844.1| unknown [Dendroctonus ponderosae]
          Length = 320

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/298 (36%), Positives = 162/298 (54%), Gaps = 10/298 (3%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K  K Y+    ++ +   +Q+   +I  HN   +QGL  Y    N  SD     +   + 
Sbjct: 29  KQNKTYKTPVEETTRYGIFQAKLLEIEEHNSRFEQGLETYKKGVNKFSDWTQDEFNAYLG 88

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
              H +  +     P     V +P  +DWR +G++T   NQ DCG+C+AFS+  +++G +
Sbjct: 89  --LHPKPAKLGKGIPYVKTGVSVPASVDWRTEGYVTGVKNQGDCGSCWAFSLTGSVEGAL 146

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           FKST ++  LS QQ+VDC+  + N GC GG L  T  Y+Q   GL  E  YPYK +   C
Sbjct: 147 FKSTGKLVSLSEQQLVDCTYGTVNFGCDGGYLEETFPYIQ-ETGLEAEASYPYKARDGTC 205

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           KF    +V  I+ + V    DE AL    AT+GPI+V+++A  +    YASG++    C+
Sbjct: 206 KFDASKVVTKINDY-VYWYGDEEALLEATATIGPISVAMDA--NYIDSYASGVFSSRLCS 262

Query: 256 SDYVNHAMLLVGYTR----NSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           SD +NH +L+VGY      N W++KN W+  WG++GY+ L RG N CGIA    Y ++
Sbjct: 263 SDDLNHGVLVVGYGSENGVNYWLVKNSWAEDWGESGYLKLLRGQNECGIAEDDSYPIV 320


>gi|395509415|ref|XP_003758993.1| PREDICTED: cathepsin L1-like, partial [Sarcophilus harrisii]
          Length = 323

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/317 (36%), Positives = 172/317 (54%), Gaps = 32/317 (10%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           Y+K+Y +K    +K++ W+ N K I+  N   ++G   Y L  N+L DL  + +   +  
Sbjct: 15  YEKNYTEKEESFRKQV-WEKNMKFINDQNLLYKEGKLSYYLGMNNLGDLTDKEFKIMLNP 73

Query: 77  LTHSRIRRTLVRSPESNESVL--IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
               R+RR    +   N S+   +P  +DWREKGFITP   Q  CG+C+AFS   A++GQ
Sbjct: 74  SMLQRVRRD---TTTKNFSIFSHLPKSVDWREKGFITPVRQQGRCGSCWAFSATGAVEGQ 130

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ-S 193
           +F  T ++ ELS Q ++DCS      GC GG++ +   Y++   G++ EE YPY  K+ S
Sbjct: 131 LFLKTGKLVELSKQNLIDCSKFQ---GCHGGTVTSAFKYIKKNEGIVSEECYPYVAKKNS 187

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
           +C ++     V I  + VLP  +E  L   +A VGP++VS+NA   +   Y  GIY +  
Sbjct: 188 LCSYRSECAAVKIRDYVVLPYGNEEILMEAVAIVGPVSVSLNAQ-KSLHFYKGGIYVEPK 246

Query: 254 CTSDYVNHAMLLVGY-----TRNS---------------WILKNWWSHHWGDNGYMYL-K 292
           C   Y NHA+LLVGY     T++                WILKN W  +WG  GY+Y+ K
Sbjct: 247 CKPRYTNHALLLVGYGYKEGTKDKKSRLEEENQYEETKFWILKNSWGVNWGKKGYVYIAK 306

Query: 293 RGNNRCGIANYAVYALI 309
             NN CG+A  A+Y ++
Sbjct: 307 DKNNHCGVATRAIYPIL 323


>gi|5081735|gb|AAD39513.1|AF147207_1 cathepsin L-like protease precursor [Artemia franciscana]
          Length = 338

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 165/303 (54%), Gaps = 12/303 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK+Y  +  +  +   +  N  K+  HN   ++G   Y +  N   DL    +   M  
Sbjct: 38  HKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYQVAMNKFGDLLHHEFRSIMNG 97

Query: 77  LTH-----SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
             H     SR   T      +N  V +P+ +DWR KG ITP  +Q  CG+C+AFS   A+
Sbjct: 98  YQHKKQNSSRAESTFTFMEPAN--VEVPESVDWRVKGAITPVKDQGQCGSCWAFSSTGAL 155

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F+ T ++  LS Q ++DCS   GN GC GG +     Y++   G+  E  YPY+ +
Sbjct: 156 EGQTFRKTGKLISLSEQNLIDCSGKYGNEGCNGGLMDQAFQYIKDNKGIDTENTYPYEAE 215

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
            ++C++   N       +  +P  +E  LK  +ATVGP++V+I+AS  +FQ Y+ G+Y +
Sbjct: 216 DNVCRYNPRNRGAIDRGFVHIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYE 275

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +C SD ++H +L+VGY     ++ W++KN WS HWGD GY+ + R   N CGIA  A Y
Sbjct: 276 PSCDSDDLDHGVLVVGYGSDNGKDYWLVKNSWSEHWGDEGYIKIARNRKNHCGIATAASY 335

Query: 307 ALI 309
            L+
Sbjct: 336 PLV 338


>gi|389608655|dbj|BAM17937.1| cathepsin L [Papilio xuthus]
          Length = 341

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 174/324 (53%), Gaps = 19/324 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW    +  QK+Y  +   K    + K++ ++ H  I  HNQ+  +G   + L++N
Sbjct: 22  LVKEEWNAFKMEHQKQYDSEVEDKF---RMKIYAENKHN-IAKHNQKYARGEVSFRLKQN 77

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNE---------SVLIPDHLDWREKGFIT 111
              D+    ++  M     +      +    + E         +V +PDH+DWR+ G +T
Sbjct: 78  KYGDMLHHEFVHTMNGFNKTTKNSKGLFGKSAGERGATFITPANVHLPDHVDWRKHGAVT 137

Query: 112 PDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTL 171
              +Q  CG+C++FS   A++GQ ++ T+ +  LS Q ++DCS   GN GC GG + N  
Sbjct: 138 EVKDQGKCGSCWSFSSTGALEGQHYRRTNILVSLSEQNLIDCSAAYGNNGCNGGLMDNAF 197

Query: 172 NYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIA 231
            Y++   G+  E+ YPY+G    C++   N   D + +  +P  DE  L   +ATVGP++
Sbjct: 198 KYIKDNRGIDTEKSYPYEGIDDKCRYNPKNTGADDNGFVDIPSGDEGKLMAAVATVGPVS 257

Query: 232 VSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDN 286
           V+I+AS  +FQ Y+ G+Y DE C+S  ++H +L+VGY  +      W++KN W   WGD 
Sbjct: 258 VAIDASQSSFQFYSDGVYFDENCSSSSLDHGVLVVGYGTDENGGDYWLVKNSWGRSWGDL 317

Query: 287 GYMYLKRG-NNRCGIANYAVYALI 309
           GY+ + R  +N CGIA  A Y L+
Sbjct: 318 GYIKMARNRDNHCGIATAASYPLV 341


>gi|262410743|gb|ACY66807.1| cathepsin L [Aphis gossypii]
          Length = 341

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 168/322 (52%), Gaps = 24/322 (7%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW +     + ++KK Y     ++ +K  +  N  KI  HN+  + G   Y L  NH  
Sbjct: 28  EEWSLF----KAQFKKIYEDVKEEAFRKKVYLDNKLKIARHNKLYETGEETYALEMNHFG 83

Query: 64  DLHPRHYIKEMTRLTHSRI----------RRTLVRSPESNESVLIPDHLDWREKGFITPD 113
           DL    Y K M     S              T ++S    E+V++P  +DWR+KG++TP 
Sbjct: 84  DLMQHEYKKMMNGFKPSLAGGDKNFTDDDAVTFLKS----ENVVVPKAIDWRKKGYVTPV 139

Query: 114 WNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNY 173
            NQ  CG+C++FS   +++GQ F+ T  +  LS Q ++DCS   GN GC GG +     Y
Sbjct: 140 KNQGQCGSCWSFSATGSLEGQHFRKTGVLVSLSEQNLIDCSRKYGNNGCEGGLMDLAFKY 199

Query: 174 VQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVS 233
           ++   GL  E+ YPY+ +   C++   N       +  +P  DE AL   LATVGP++++
Sbjct: 200 IKSNKGLDTEKSYPYEAEDDKCRYNPENSGATDKGFVDIPEGDEDALMHALATVGPVSIA 259

Query: 234 INASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGY 288
           I+AS   FQ Y  G++ +  C+S  ++H +L VGY  +      WI+KN W   WGD GY
Sbjct: 260 IDASSEKFQFYKKGVFYNPRCSSTELDHGVLAVGYGTDHKGGDYWIVKNSWGKTWGDQGY 319

Query: 289 MYLKRG-NNRCGIANYAVYALI 309
           + + R   N CG+A+ A Y L+
Sbjct: 320 IMMARNKKNNCGVASSASYPLV 341


>gi|330434686|gb|AEC22811.1| cathepsin L [Macrobrachium nipponense]
          Length = 342

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/308 (34%), Positives = 166/308 (53%), Gaps = 14/308 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           ++ K Y     ++ +   +  N +KI  HN+    G   Y L  N   D+    ++  M 
Sbjct: 35  EHSKKYESDTEETFRMKIFAENKQKIAAHNKLYHTGSKTYKLGMNKYGDMLHHEFVNMMN 94

Query: 76  --RLTHSRIRRTLVRS------PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
             R   S       R        E  E V++P  +DWREKG +T   +Q  CG+C+AFS 
Sbjct: 95  GFRANTSGAGYKANRGFQGAHFVEPPEDVVMPKSVDWREKGAVTEVKDQGSCGSCWAFSA 154

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++GQ ++ T ++  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 155 TGALEGQHYRQTGDLVSLSEQNLVDCSSKFGNNGCNGGLMDNAFQYIKVNGGIDTEKSYP 214

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+ +   C++   N   D   +  +   +E+ALK  +AT+GP++V+I+AS  +FQ Y  G
Sbjct: 215 YEAEDEPCRYNPANAGADDRGFVDVREGNENALKKAIATIGPVSVAIDASQDSFQFYQHG 274

Query: 248 IYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           +Y D  C+++ ++H +L VGY      ++ W++KN WS  WGD GY+ + R  NN CGIA
Sbjct: 275 VYSDPDCSAENLDHGVLAVGYGTTEDGQDYWLVKNSWSKSWGDQGYIKIARNQNNMCGIA 334

Query: 302 NYAVYALI 309
           + A Y L+
Sbjct: 335 SAASYPLV 342


>gi|402770501|gb|AFQ98385.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/302 (35%), Positives = 167/302 (55%), Gaps = 12/302 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y+    +  +   +  N   I  HN +  +GL  Y L  N   DL    + +    
Sbjct: 34  HKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFN- 92

Query: 77  LTHSRIRRT----LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
             H   R+T     +     N+S L P  +DWR+KG +TP  +Q  CG+C+AFS   +++
Sbjct: 93  -GHHGTRKTGGSTFLPPANVNDSSL-PKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLE 150

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F    E+  LS Q +VDCS   GN GC GG + +   Y++   G+  E+ YPY+   
Sbjct: 151 GQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVD 210

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C+FK+ ++    + +  +    E  LK  +ATVGPI+V+I+AS  +FQLY+ G+YD+ 
Sbjct: 211 GECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEP 270

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYA 307
            C+S+ ++H +L+VGY     +  W++KN W+  WGD GY+ + R  NN+CGIA+ A Y 
Sbjct: 271 ECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYP 330

Query: 308 LI 309
           L+
Sbjct: 331 LV 332


>gi|75060921|sp|Q5E998.1|CATL2_BOVIN RecName: Full=Cathepsin L2; Flags: Precursor
 gi|59858409|gb|AAX09039.1| cathepsin L2 preproprotein [Bos taurus]
          Length = 334

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/290 (37%), Positives = 156/290 (53%), Gaps = 13/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVR 88
           ++  W+ N K I  HNQE  +G HG+ +  N   D+    + + M    + + ++  L  
Sbjct: 48  RRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFH 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     V +P  +DW +KG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLL---VDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG + N   Y++  G L  EE YPY    +     +P       +
Sbjct: 165 NLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDT 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  PQ E AL   +ATVGPI+V+I+A   +FQ Y SGIY D  C+S  ++H +L+VGY
Sbjct: 225 GFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGY 284

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       WI+KN W   WG NGY+ + K  NN CGIA  A Y  +
Sbjct: 285 GFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|94421564|gb|ABF18889.1| cathepsin-L [Lygus lineolaris]
          Length = 314

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 156/284 (54%), Gaps = 6/284 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + KY K Y     ++ ++  +    +K+  HN   +QGL  Y L  N  +D+H   + K 
Sbjct: 31  KAKYGKTYESNENEAARRTIYFMAKEKVMEHNARFEQGLVSYKLGLNSFADMHNGEFRKM 90

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           M        R ++V   ESN  + +P  +DWR KG +TP  NQ  CG+C+AFS   +++G
Sbjct: 91  MNGYRRGTPRNSVVVHVESN--ITLPASVDWRTKGAVTPIKNQGQCGSCWAFSTTGSLEG 148

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q      ++  LS Q++VDCS   GN GC GG + +   Y++   G+  E+ YPY G+  
Sbjct: 149 QHALKKGKLVSLSEQELVDCSAAEGNDGCDGGLMDDAFTYIKKNNGIDTEQSYPYTGEDG 208

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C FK+ ++   ++ +  +    E  L+   AT+GPI+V+I+AS   FQLY SG+YD   
Sbjct: 209 TCSFKKSDVAATVTGFVDVTSGSESGLQDASATIGPISVAIDASSWDFQLYESGVYDVSD 268

Query: 254 CTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKR 293
           C++  ++H +L+VGY  +     W++KN W   WG +GY+ + R
Sbjct: 269 CSTTELDHGVLVVGYGTDDGTAYWLVKNSWGTDWGHHGYIQMSR 312


>gi|110625773|ref|NP_081620.2| cathepsin L-like 3 precursor [Mus musculus]
 gi|74208432|dbj|BAE26401.1| unnamed protein product [Mus musculus]
 gi|187955662|gb|AAI47425.1| RIKEN cDNA 2310051M13 gene [Mus musculus]
 gi|187957686|gb|AAI47424.1| RIKEN cDNA 2310051M13 gene [Mus musculus]
          Length = 331

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 167/304 (54%), Gaps = 13/304 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+KK Y     + +K+  W++N K I  HN++  +G HG++L  N   DL    + + 
Sbjct: 33  KTKHKKTYNMN-DEGQKRAVWENNKKMIDLHNEDYLKGKHGFSLEMNAFGDLTNTEFREL 91

Query: 74  MTRLTHSRIRRTL--VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           MT     + +  +   + P   +   +P  +DWR+ G++TP  +Q  CG+C+AFS   ++
Sbjct: 92  MTGFQGQKTKMMMKVFQEPLLGD---VPKSVDWRDHGYVTPVKDQGSCGSCWAFSAVGSL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+F+ T ++  LS+Q +VDCS   GN GC GG       YV+  GGL     YPY+  
Sbjct: 149 EGQMFRKTGKLVPLSVQNLVDCSWSQGNQGCDGGLPDLAFQYVKDNGGLDTSVSYPYEAL 208

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N    ++ + V     E AL   +ATVGPI+V I+    +FQ Y  G+Y +
Sbjct: 209 NGTCRYNPKNSAATVTGF-VNVQSSEDALMKAVATVGPISVGIDTKHKSFQFYKEGMYYE 267

Query: 252 EACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAV 305
             C+S  ++HA+L+VGY   S     W++KN W   WG NGY+ + K  NN CGIA+ A 
Sbjct: 268 PDCSSTVLDHAVLVVGYGEESDGRKYWLVKNSWGRDWGMNGYIKMAKDRNNNCGIASDAS 327

Query: 306 YALI 309
           Y ++
Sbjct: 328 YPVV 331


>gi|2239107|emb|CAA70693.1| cathepsin L-like cysteine proteinase [Heterodera glycines]
          Length = 374

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 172/305 (56%), Gaps = 9/305 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           ++K+ K Y  +  ++++ L + S  + I  HN+  ++G   + + E H++DL    Y K 
Sbjct: 70  KQKHGKAYADQEVENERMLTYLSAKQFIDKHNEAYKEGKVSFRVGETHIADLPFSEYQKL 129

Query: 73  -EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
               RL    +RR             +P+ +DWR+KG++T   NQ  CG+C+AFS   A+
Sbjct: 130 NGFRRLMGDSLRRNASTFLAPMNVGDLPESVDWRDKGWVTEVKNQGMCGSCWAFSATGAL 189

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ  +    +  LS Q ++DCS   GN+GC GG + N   Y++   G+ KE  YPYK K
Sbjct: 190 EGQHVRDKGHLVSLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNKGIDKETAYPYKAK 249

Query: 192 QS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C FKR ++    S ++ +   DE  LK+ +AT GP++V+I+A   +FQLY +G+Y 
Sbjct: 250 TGKKCLFKRNDVGATDSGYNDIAEGDEEDLKMAVATQGPVSVAIDAGHRSFQLYTNGVYF 309

Query: 251 DEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           ++ C  + ++H +L+VGY  +      WI+KN W   WG+ GY+ + R  NN CGIA++A
Sbjct: 310 EKECDPENLDHGVLVVGYGTDPTQGDYWIVKNSWGTRWGEQGYIRMARNRNNNCGIASHA 369

Query: 305 VYALI 309
            + L+
Sbjct: 370 SFPLV 374


>gi|74142447|dbj|BAE31977.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 158/286 (55%), Gaps = 14/286 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVRSPES 92
           W+ N + I  HN E   G HG+++  N   D+    + + +    H + ++  L + P  
Sbjct: 52  WEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLM 111

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
              + IP  +DWREKG +TP  N+  CG+C+AFS +  ++GQ+F  T ++  LS Q +VD
Sbjct: 112 ---LKIPKSVDWREKGCVTPVKNKGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 168

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +     Y++  GGL  EE YPY+ K   CK+ R    V   +  V 
Sbjct: 169 CSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVD 227

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
            PQ E AL   +ATVGPI+V+++AS  + Q Y+SGIY +  C+S  ++H +LLVGY    
Sbjct: 228 IPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEG 287

Query: 273 --------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   W++KN W   WG  GY+ + K  +N CG+A  A Y ++
Sbjct: 288 TDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|34850847|dbj|BAC87861.1| cathepsin L [Engraulis japonicus]
          Length = 336

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/293 (36%), Positives = 158/293 (53%), Gaps = 16/293 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHS---RIRRTL 86
           +++ W+ N +KI  HN E   G H Y L  NH  D+    + + M    H    R++ +L
Sbjct: 47  RRVVWEKNLRKIEMHNLEHSMGAHSYRLGMNHFGDMTHEEFRQVMNGYKHKAERRVKGSL 106

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E+   P  +D+R+ G+ TP  +Q  CG+C+AFS   A++GQ+F+   ++  LS
Sbjct: 107 FMEPNFIEA---PKKIDYRDLGYATPVKDQGQCGSCWAFSTTGAMEGQLFREGGKLVSLS 163

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y++  GGL  E+ YPY G     C +       +
Sbjct: 164 EQNLVDCSRPEGNEGCNGGLMDQAFQYIKDNGGLDTEDAYPYLGTDDQDCHYDPKYSAAN 223

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   E AL   +A VGP++V+I+A    FQ Y SGIY ++ C+S  ++H +L+
Sbjct: 224 DTGFVDIPEGKERALMKAVAAVGPVSVAIDAGHECFQFYHSGIYFEKECSSTELDHGVLV 283

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 284 VGYGFEGEDVDGKKYWIVKNSWSEKWGDEGYIYMAKDRKNHCGIATAASYPLM 336


>gi|74219261|dbj|BAE26764.1| unnamed protein product [Mus musculus]
          Length = 333

 Score =  197 bits (502), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 162/289 (56%), Gaps = 12/289 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W+ N K I  HN E  +G H +T+  N   DL    ++K MT     +I+R  V  
Sbjct: 48  RRAVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFRRQKIKRMHVF- 106

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
            + ++ + +P ++DWR  G++TP  NQ  C + +AFS   +++GQ+FK T  +  LS Q 
Sbjct: 107 -QDHQFLYVPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQN 165

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW 209
           ++DC   +    C+GG ++N   YV+  GGL  EE YPY G    C++   N   ++  +
Sbjct: 166 LLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGPDRKCRYHAENSAANVRDF 225

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY- 268
             +P ++E AL   +A VGPI+V+++AS  +FQ Y SGIY +  C   ++NHA+L+VGY 
Sbjct: 226 VQIPGREE-ALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYG 284

Query: 269 -------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
                    + W++KN W   WG  GY+ + +  NN CGIA  A Y ++
Sbjct: 285 FEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKDWNNHCGIATLATYPIV 333


>gi|288764223|emb|CAQ03432.1| silcatein 1 [Spongilla lacustris]
 gi|296168747|emb|CAQ54051.1| silicatein alpha 3 [Spongilla lacustris]
          Length = 327

 Score =  197 bits (502), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 164/298 (55%), Gaps = 9/298 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           ++K Y  +  + ++   W +N K I  HN  A   L GYTL  N   D+    + +    
Sbjct: 34  HQKSYDTELLEMERHAIWLANKKYIDHHNANAN--LFGYTLAMNGFGDMTSAEFAESF-- 89

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           LTH  ++R  +++ E+ + V   D +DWR KG +T    Q  CG+ YAF+   A++G   
Sbjct: 90  LTHKHVQRLGLQAFEAPKGVSYADSMDWRTKGVVTSVKTQSQCGSSYAFAAVGALEGASA 149

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
            +T ++  LS Q ++DCS+  GN GC+GG       YV   GG+  E  YPYKGKQS C+
Sbjct: 150 LATDKLVALSEQNIIDCSVPYGNHGCSGGDTYTAFKYVVDNGGIDTESSYPYKGKQSSCQ 209

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +   N     +    +    E  L   +A+ GP+AV+++AS ++F  Y SG++D   C++
Sbjct: 210 YNSKNAGATATGVVKIASGSESDLMSAVASGGPVAVAVDASVNSFMFYQSGVFDSSTCSN 269

Query: 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
             +NHAML+ GY     ++ W++KN W   WG++GY+ + R   N+CGIA+ A+  ++
Sbjct: 270 TKLNHAMLVTGYGSVNGKDYWLVKNSWGTSWGESGYIRMVRNKYNQCGIASDALIPML 327


>gi|326672302|ref|XP_003199633.1| PREDICTED: cathepsin L1-like [Danio rerio]
 gi|157423549|gb|AAI53506.1| Im:6910535 [Danio rerio]
          Length = 335

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 104/290 (35%), Positives = 159/290 (54%), Gaps = 11/290 (3%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    + + M        R +    
Sbjct: 47  RRMIWEENLRKIEQHNFEYSYGNHTFKMGMNQFGDMTNEEFRQAMNGYKQDPNRTSKGAL 106

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
                    P  +DWR++G++TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S Q 
Sbjct: 107 FMEPSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQN 166

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDISS 208
           +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V  I+ 
Sbjct: 167 LVDCSRPQGNQGCNGGIMDQAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITG 226

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + ACTS  ++HA+L+VGY
Sbjct: 227 FVDIPKGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACTSR-LDHAVLVVGY 285

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       WI+KN WS  WGD GY+Y+ K  NN CGIA  A Y L+
Sbjct: 286 GYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 335


>gi|296168737|emb|CAQ54046.1| silicatein alpha 2 [Ephydatia muelleri]
          Length = 340

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 165/303 (54%), Gaps = 11/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  + K Y  +  + ++   W SN K I  HN  A     GYTL  NH  DL  R +  +
Sbjct: 42  KDSHGKSYTSELEELERHSVWLSNRKYIEEHNAHADD--FGYTLAMNHFGDLSEREFKDK 99

Query: 74  MTRLTHSRIRRTL--VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
              LTH     T   V + ++ + +   D +DWR KG +T   NQ DCGA YAF+    +
Sbjct: 100 F--LTHEPGNYTSRGVATFKAPQGMKYVDSIDWRTKGAVTSVKNQGDCGASYAFAATGTM 157

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +G    S  +   LS Q ++DCS+  GN GC+GG     + YV   GG+  E  Y ++GK
Sbjct: 158 EGANALSNDKQVALSEQNIIDCSVAYGNHGCSGGDTYTAIKYVVDNGGIDTESSYSFRGK 217

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           QS C++   N     +    +    E  L   +ATVGP+AV+++A+ + F+ Y SG++D 
Sbjct: 218 QSSCQYNSKNSGASATGAVSISYGSESDLMSAVATVGPVAVAVDANTNAFRFYQSGVFDS 277

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
             C+S  +NHAML+ GY     ++ W++KN W  +WGD+GY+ + R   N+CGIA+ A+Y
Sbjct: 278 STCSSTKLNHAMLVTGYGSYNGKDYWLVKNSWGKYWGDSGYIMMVRNKYNQCGIASDALY 337

Query: 307 ALI 309
           +++
Sbjct: 338 SML 340


>gi|301609082|ref|XP_002934106.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 333

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/302 (36%), Positives = 163/302 (53%), Gaps = 10/302 (3%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           K ++K Y+    +  ++  W+   K I  HN E   GLH Y +  NHL D+        M
Sbjct: 35  KTHQKTYKDAEEERARRTIWEETLKFITVHNLEYSLGLHTYEVGMNHLGDMTGEEVAATM 94

Query: 75  TRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           T  T SR     +   P+       P  +DWR +G +T   NQ  CG+CYAF    A++ 
Sbjct: 95  TGYTGSRDSLANMTEVPKEILEAQTPASIDWRTQGCVTSVKNQGSCGSCYAFGTVGALEC 154

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q  K    +   S Q++VDCS   GN GC GG L+ +  Y++   G+M+E  YPY  K+ 
Sbjct: 155 QWKKKMGTLVSFSPQELVDCSYTEGNNGCKGGYLQASFRYMKKY-GIMEESSYPYTAKEG 213

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            CK  +P+ V  + ++ V+P   E  L   L TVGP++V+I+ S   F++Y SG+Y D  
Sbjct: 214 RCKKDKPSNVGVVKTFYVVPAGKELLLMKVLGTVGPVSVAIDCSREGFRMYKSGVYYDPY 273

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGY--MYLKRGNNRCGIANYAVYA 307
           CT+  V+HA+L+VGY     ++ W++KN W   +GD GY  M   RGNN C IA++AVY 
Sbjct: 274 CTTK-VDHAVLVVGYGTDNGKDYWLVKNSWGVGYGDKGYIKMARNRGNN-CAIASHAVYP 331

Query: 308 LI 309
            +
Sbjct: 332 TV 333


>gi|402770511|gb|AFQ98390.1| cathepsin L [Rhipicephalus microplus]
 gi|402770513|gb|AFQ98391.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 106/301 (35%), Positives = 166/301 (55%), Gaps = 10/301 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y+    +  +   +  N   I  HN +  +GL  Y L  N   DL    + +    
Sbjct: 34  HKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFN- 92

Query: 77  LTHSRIRRTLVRS---PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
             H   R+T   S   P +     +P  +DWR+KG +TP  +Q  CG+C+AFS   +++G
Sbjct: 93  -GHHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEG 151

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q F    E+  LS Q +VDCS   GN GC GG + +   Y++   G+  E+ YPY+    
Sbjct: 152 QHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDG 211

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+FK+ ++    + +  +    E  LK  +ATVGPI+V+I+AS  +FQLY+ G+YD+  
Sbjct: 212 ECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPE 271

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYAL 308
           C+S+ ++H +L+VGY     +  W++KN W+  WGD GY+ + R  NN+CGIA+ A Y L
Sbjct: 272 CSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPL 331

Query: 309 I 309
           +
Sbjct: 332 V 332


>gi|121543825|gb|ABM55577.1| putative cathepsin L-like protease [Maconellicoccus hirsutus]
          Length = 341

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 172/319 (53%), Gaps = 19/319 (5%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW +     + ++ K Y  +  +  +   +  N  KI  HN+  Q G   Y L  NH  
Sbjct: 29  EEWELF----KTQFSKAYNTEIEEKFRMKVFMDNKHKIARHNKLFQNGEVSYELEMNHFG 84

Query: 64  DLHPRHYIKEMTRLTHSRIRRT------LVRSPESNESVLIPDHLDWREKGFITPDWNQE 117
           DL    ++K +    HS  R T      +   P  N  V +PD +DWR +G +T   NQ 
Sbjct: 85  DLLHHEFVKTVNGYRHSLRRVTGDEIDSVTFIPAYN--VTVPDSVDWRTEGAVTEVKNQG 142

Query: 118 DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177
            CG+C+AFS   +++GQ F++T ++  LS Q ++DCS   GN GC+GG + N   Y++  
Sbjct: 143 QCGSCWAFSTTGSLEGQHFRNTKQLTSLSEQNLIDCSGKYGNNGCSGGLMDNAFAYIKSN 202

Query: 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
            G+  E+ YPY+G    C++K          +  +P  DE  LK+ +ATVGPI+V+I+AS
Sbjct: 203 KGIDTEQSYPYEGIDDKCRYKPQESGATDKGFVDIPQGDEEKLKLAVATVGPISVAIDAS 262

Query: 238 PHTFQLYASGIYDDEACTS--DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYL 291
             +FQ Y  G+Y D+ C +  + ++H +L VGY     ++ W++KN W   WG +GY+ +
Sbjct: 263 HQSFQFYKKGVYYDKGCGNGEEDLDHGVLAVGYGTENGKDYWLVKNSWGKRWGLDGYIKM 322

Query: 292 KRG-NNRCGIANYAVYALI 309
            R  +N CGIA  A Y L+
Sbjct: 323 ARNKHNHCGIATSASYPLV 341


>gi|402770515|gb|AFQ98392.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  197 bits (501), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 106/301 (35%), Positives = 166/301 (55%), Gaps = 10/301 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y+    +  +   +  N   I  HN +  +GL  Y L  N   DL    + +    
Sbjct: 34  HKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFN- 92

Query: 77  LTHSRIRRTLVRS---PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
             H   R+T   S   P +     +P  +DWR+KG +TP  +Q  CG+C+AFS   +++G
Sbjct: 93  -GHHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEG 151

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q F    E+  LS Q +VDCS   GN GC GG + +   Y++   G+  E+ YPY+    
Sbjct: 152 QHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDG 211

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+FK+ ++    + +  +    E  LK  +ATVGPI+V+I+AS  +FQLY+ G+YD+  
Sbjct: 212 ECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPE 271

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYAL 308
           C+S+ ++H +L+VGY     +  W++KN W+  WGD GY+ + R  NN+CGIA+ A Y L
Sbjct: 272 CSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPL 331

Query: 309 I 309
           +
Sbjct: 332 V 332


>gi|164420679|ref|NP_001037464.2| fibroinase precursor [Bombyx mori]
 gi|40556818|gb|AAR87763.1| fibroinase precursor [Bombyx mori]
          Length = 341

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 173/309 (55%), Gaps = 15/309 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++ +Y  +  D+ +   +  +   I  HNQ+ + GL  Y L  N   D+    ++K M 
Sbjct: 33  QHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMN 92

Query: 76  RLTHSR-------IRRTLVRSPE--SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFS 126
               +        ++   VR  +  S  +V +P+ +DWR+ G +T   +Q  CG+C++FS
Sbjct: 93  GFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCGSCWSFS 152

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++GQ F+ +  +  LS Q ++DCS   GN GC GG + N   Y++  GG+  E+ Y
Sbjct: 153 TTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKYIKDNGGIDTEQTY 212

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY+G    C++   N   +   +  +P  DE  L   +ATVGP++V+I+AS  +FQLY+S
Sbjct: 213 PYEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSS 272

Query: 247 GIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGI 300
           G+Y++E C+S  ++H +L+VGY  +      W++KN W   WG+ GY+ + R  NNRCGI
Sbjct: 273 GVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNRCGI 332

Query: 301 ANYAVYALI 309
           A+ A Y L+
Sbjct: 333 ASSASYPLV 341


>gi|30017423|ref|NP_835199.1| testin-2 precursor [Mus musculus]
 gi|81895036|sp|Q80UB0.1|TEST2_MOUSE RecName: Full=Testin-2; Contains: RecName: Full=Testin-1; Flags:
           Precursor
 gi|29289939|gb|AAN63093.1| testin precursor [Mus musculus]
 gi|38173997|gb|AAH61218.1| RIKEN cDNA 4930486L24 gene [Mus musculus]
          Length = 333

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 162/289 (56%), Gaps = 12/289 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W+ N K I  HN E  +G H +T+  N   DL    ++K MT     +I+R  V  
Sbjct: 48  RRAVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFRRQKIKRMHVF- 106

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
            + ++ + +P ++DWR  G++TP  NQ  C + +AFS   +++GQ+FK T  +  LS Q 
Sbjct: 107 -QDHQFLYVPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQN 165

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW 209
           ++DC   +    C+GG ++N   YV+  GGL  EE YPY G    C++   N   ++  +
Sbjct: 166 LLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRYHAENSAANVRDF 225

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY- 268
             +P ++E AL   +A VGPI+V+++AS  +FQ Y SGIY +  C   ++NHA+L+VGY 
Sbjct: 226 VQIPGREE-ALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYG 284

Query: 269 -------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
                    + W++KN W   WG  GY+ + +  NN CGIA  A Y ++
Sbjct: 285 FEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKDWNNHCGIATLATYPIV 333


>gi|148709357|gb|EDL41303.1| RIKEN cDNA 4930486L24 [Mus musculus]
          Length = 334

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 162/289 (56%), Gaps = 12/289 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W+ N K I  HN E  +G H +T+  N   DL    ++K MT     +I+R  V  
Sbjct: 49  RRAVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFRRQKIKRMHVF- 107

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
            + ++ + +P ++DWR  G++TP  NQ  C + +AFS   +++GQ+FK T  +  LS Q 
Sbjct: 108 -QDHQFLYVPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQN 166

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW 209
           ++DC   +    C+GG ++N   YV+  GGL  EE YPY G    C++   N   ++  +
Sbjct: 167 LLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRYHAENSAANVRDF 226

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY- 268
             +P ++E AL   +A VGPI+V+++AS  +FQ Y SGIY +  C   ++NHA+L+VGY 
Sbjct: 227 VQIPGREE-ALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYG 285

Query: 269 -------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
                    + W++KN W   WG  GY+ + +  NN CGIA  A Y ++
Sbjct: 286 FEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKDWNNHCGIATLATYPIV 334


>gi|27806673|ref|NP_776457.1| cathepsin L2 precursor [Bos taurus]
 gi|1542853|emb|CAA62870.1| cathepsin L [Bos taurus]
          Length = 334

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/290 (37%), Positives = 155/290 (53%), Gaps = 13/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVR 88
           ++  W+ N K I  HNQE  +G H + +  N   D+    + + M    + + ++  L  
Sbjct: 48  RRAVWEKNKKIIDLHNQEYSEGKHAFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFH 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     V +P  +DW +KG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLL---VDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC GG + N   Y++  GGL  EE YPY    +     +P       +
Sbjct: 165 NLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDT 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
             V  PQ E AL   +ATVGPI+V+I+A   +FQ Y SGIY D  C+   ++H +L+VGY
Sbjct: 225 GFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGY 284

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       WI+KN W   WG NGY+ + K  NN CGIA  A Y  +
Sbjct: 285 GFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334


>gi|356984263|gb|AET43955.1| cathepsin L2, partial [Reishia clavigera]
          Length = 278

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 156/279 (55%), Gaps = 9/279 (3%)

Query: 17  YKKDYRK---KATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +KK Y K      +S +++ W+ N KKI  HN EA +GLH Y L  N L DL  + +   
Sbjct: 1   FKKTYNKLYSAEDESIRRMIWERNLKKIEEHNLEADRGLHTYRLGMNPLGDLTAKDFSWM 60

Query: 74  MTRLTHSRIRRT-LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           +     S  R       P SN   L P  +DWR KG++TP  NQ+ CG+C+AFS   +++
Sbjct: 61  LNGYKMSANRTAGATYLPPSNVGDL-PSEVDWRTKGYVTPVKNQKQCGSCWAFSATGSLE 119

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ FK T  +  LS Q +VDCS   GN GC GG +     Y++   G+  E+ YPY+   
Sbjct: 120 GQHFKKTGTLVSLSEQNLVDCSKKEGNEGCEGGLMDQAFEYIKRNKGIDTEQSYPYRAVD 179

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C+F R ++    + ++ +    E  L+  +ATVGPI+V+I+AS  +FQLY SG+Y + 
Sbjct: 180 EKCRFSRADVGATDTGYTDIHKGSEKDLQSAVATVGPISVAIDASRDSFQLYKSGVYYEP 239

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNG 287
            C+S  ++H +L VGY    +++ WI+KN W   WG  G
Sbjct: 240 KCSSTMLDHGVLAVGYGTTDSKDYWIVKNSWGTQWGMKG 278


>gi|402770509|gb|AFQ98389.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 103/278 (37%), Positives = 158/278 (56%), Gaps = 12/278 (4%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT----LVRSPESNESV 96
           I  HN +  +GL  Y L  N   DL    + +      H   R+T     +     N+S 
Sbjct: 58  IARHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFN--GHHGTRKTGGSTFLPPANVNDSS 115

Query: 97  LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSII 156
           L P  +DWR+KG +TP  +Q  CG+C+AFS   +++GQ F    E+  LS Q +VDCS  
Sbjct: 116 L-PKAVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKNGELVSLSEQNLVDCSQS 174

Query: 157 SGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQD 216
            GN GC GG + +   Y++   G+  E+ YPY+     C+FK+ ++    + +  +    
Sbjct: 175 FGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVDGECRFKKEDVGATDTGYVEIKAGS 234

Query: 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNS 272
           E  LK  +ATVGPI+V+I+AS  +FQLY+ G+YD+  C+S+ ++H +L+VGY     +  
Sbjct: 235 EDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKGGKKY 294

Query: 273 WILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
           W++KN W+  WGD GY+ + R  NN+CGIA+ A Y L+
Sbjct: 295 WLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYPLV 332


>gi|62955529|ref|NP_001017778.1| cathepsin K precursor [Danio rerio]
 gi|62204416|gb|AAH92901.1| Cathepsin K [Danio rerio]
 gi|182889052|gb|AAI64579.1| Ctsk protein [Danio rerio]
          Length = 333

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +K++Y     +S ++  W+ N   I  HN+E + G+H Y L  NH  D+      +++  
Sbjct: 37  HKREYNGLNEESIRRTIWEKNMLFIEAHNKEYELGIHTYDLGMNHFGDMTLEEVAEKVMG 96

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L     R         +    +P  +D+R+ G++T   NQ  CG+C+AFS   A++GQ+ 
Sbjct: 97  LQMPMYRDPANTFVPDDRVGKLPKSIDYRKLGYVTSVKNQGSCGSCWAFSSVGALEGQLM 156

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K+  ++ +LS Q +VDC  ++ N GC GG + N   YV    G+  EE YPY G    C 
Sbjct: 157 KTKGQLVDLSPQNLVDC--VTENDGCGGGYMTNAFRYVSNNQGIDSEESYPYVGTDQQCA 214

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +    +      +  +P  +E AL   +A VGP++V I+A   TF  Y SG+Y D  C  
Sbjct: 215 YNTSGVAASCRGYKEIPQGNERALTAAVANVGPVSVGIDAMQSTFLYYKSGVYYDPNCNK 274

Query: 257 DYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           + VNHA+L VGY      +  WI+KN W   WG  GY+ + R  NN CGIAN A + ++
Sbjct: 275 EDVNHAVLAVGYGATPRGKKYWIVKNSWGEEWGKKGYVLMARNRNNACGIANLASFPVM 333


>gi|156739289|ref|NP_001096592.1| uncharacterized protein LOC569326 precursor [Danio rerio]
 gi|156230119|gb|AAI52283.1| Im:6910535 protein [Danio rerio]
          Length = 335

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/290 (35%), Positives = 159/290 (54%), Gaps = 11/290 (3%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +++ W+ N +KI  HN E   G H + +  N   D+    + + M        R +    
Sbjct: 47  RRMIWEENLRKIEQHNFEYSLGNHTFKMGMNQFGDMTNEEFRQAMNGYKQDPNRTSKGAL 106

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
                    P  +DWR++G++TP  +Q+ CG+C++FS   A++GQ+F+ T ++  +S Q 
Sbjct: 107 FMEPSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQLFRKTGKLISMSEQN 166

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDISS 208
           +VDCS   GN GC GG +     YV+   GL  E+ YPY  +  + C++     V  I+ 
Sbjct: 167 LVDCSRPQGNQGCNGGIMDQAFQYVKENKGLDSEQSYPYLARDDLPCRYDPRFNVAKITG 226

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           +  +P  +E AL   +A VGP++V+I+AS  + Q Y SGIY + ACTS  ++HA+L+VGY
Sbjct: 227 FVDIPRGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACTSR-LDHAVLVVGY 285

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       WI+KN WS  WGD GY+Y+ K  NN CGIA  A Y L+
Sbjct: 286 GYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGIATMASYPLM 335


>gi|7381610|gb|AAF61565.1|AF227957_1 cathepsin L-like proteinase precursor [Rhipicephalus microplus]
          Length = 332

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 107/302 (35%), Positives = 167/302 (55%), Gaps = 12/302 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y+    +  +   +  N   I  HN +  +GL  Y L  N   DL    + +    
Sbjct: 34  HKKSYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFN- 92

Query: 77  LTHSRIRRT----LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
             H   R+T     +     N+S L P  +DWR+KG +TP  +Q  CG+C+AFS   +++
Sbjct: 93  -GHHGTRKTGGSTFLPPANVNDSSL-PKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLE 150

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F    E+  LS Q +VDCS   GN GC GG + +   Y++   G+  E+ YPY+   
Sbjct: 151 GQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAVD 210

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C+FK+ ++    + +  +    E  LK  +ATVGPI+V+I+AS  +FQLY+ G+YD+ 
Sbjct: 211 GECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEP 270

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYA 307
            C+S+ ++H +L+VGY     +  W++KN W+  WGD GY+ + R  NN+CGIA+ A Y 
Sbjct: 271 ECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYP 330

Query: 308 LI 309
           L+
Sbjct: 331 LV 332


>gi|261289787|ref|XP_002611755.1| hypothetical protein BRAFLDRAFT_284339 [Branchiostoma floridae]
 gi|229297127|gb|EEN67765.1| hypothetical protein BRAFLDRAFT_284339 [Branchiostoma floridae]
          Length = 327

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 164/292 (56%), Gaps = 9/292 (3%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY---IKEMTRLTHSRIR 83
           D  +   +Q N + +  HN+EA  G H + +R N   D+    +   +     L  ++ +
Sbjct: 36  DGARYAIFQENSRIVKQHNEEAAMGKHTFFMRMNKFGDMTNEEFQMLVIGSGLLYSNKTQ 95

Query: 84  RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIE 143
           +T     ES   + + D +DWR+KG +T   NQE CG+C+AFS   +++GQ F  +  + 
Sbjct: 96  QTEGGVFESLPGLKVNDTVDWRQKGAVTKVKNQEQCGSCWAFSTTGSLEGQHFLKSGTLV 155

Query: 144 ELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK-QSICKFKRPNI 202
            LS Q +VDCS   GN GC GG +     Y++  GG+  EE YPYKGK +  C++K    
Sbjct: 156 SLSEQNLVDCSRKEGNKGCQGGLMDQAFKYIKTNGGIDTEECYPYKGKNERKCEYKSSCS 215

Query: 203 VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHA 262
              +SS+  +   DE AL    AT+GPI+V I+AS  +FQLY  G+Y ++ C+S  ++H 
Sbjct: 216 GATLSSYVDIKTGDEDALMQASATIGPISVGIDASHPSFQLYDHGVYHEKRCSSKKLDHG 275

Query: 263 MLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           +L+VGY     ++ W++KN W   WG  GY+ + R  +N+CGIA  A Y ++
Sbjct: 276 VLVVGYGTDGEKDYWLVKNSWGEEWGMEGYIKMSRNKDNQCGIATQASYPVV 327


>gi|305434756|gb|ADM53740.1| cathepsin L1 precursor [Lepeophtheirus salmonis]
          Length = 325

 Score =  197 bits (500), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 103/285 (36%), Positives = 156/285 (54%), Gaps = 13/285 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIR--RTLVRSPE 91
           ++ N  KI  HN EAQ GLH Y+L  N   DL    +++  T L         T++    
Sbjct: 45  FEENRIKIQKHNAEAQNGLHTYSLEMNQYGDLLQSEFLQGYTGLAKGSYSGDNTVIL--- 101

Query: 92  SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVV 151
            + S  +P +++W + G +T   +Q+DCG+C+AFS   +++GQ F    ++   S QQ+V
Sbjct: 102 -DNSAPVPSYVNWTKNGAVTAVKDQKDCGSCWAFSTTGSVEGQYFIKNKKLLSFSEQQLV 160

Query: 152 DCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
           DCS    N GC GG + N   Y+    G+  E+ YPY     +C + +      ISS+  
Sbjct: 161 DCSSDFRNEGCNGGWMDNAFKYLIANKGIATEDTYPYTATDGVCVYNKTMAAGRISSFKD 220

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRN 271
           +    E  LK+ +A +GPI+V+I+AS   FQ Y  G+Y DE C+S Y++H +L VGY  +
Sbjct: 221 VKHGSEDQLKLAVAQIGPISVAIDASSGDFQFYKKGVYVDEECSSKYLDHGVLAVGYGTD 280

Query: 272 S------WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
                  W++KN WS  WGD GY+ + R + N CGIA+ A Y +I
Sbjct: 281 KGTGLDYWLVKNSWSASWGDQGYIKMARNHKNMCGIASLASYPVI 325


>gi|432114311|gb|ELK36239.1| Cathepsin S [Myotis davidii]
          Length = 340

 Score =  197 bits (500), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/303 (36%), Positives = 170/303 (56%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y ++  +  ++  W+ N K +  HN E   G+H Y L  NHL+D+     +  
Sbjct: 41  KKTYGKQYTEENEEVTRRFIWEKNLKYVMLHNLEHSMGMHSYDLGMNHLADMTSEEVMLL 100

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +  + +SN +  +PD +DWR+KG +T    Q  CG+C+AFS   A++
Sbjct: 101 MSSLRVPSQWQRNV--TFKSNPNQKLPDSMDWRDKGCVTEVKYQGSCGSCWAFSAVGALE 158

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS+Q +VDCS     N GC GG +     Y+    G+  E  YPYK  
Sbjct: 159 AQLKLKTGKLVSLSVQNLVDCSTGKYSNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAM 218

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N     S +  LP  +E ALK  +A  GP++V+I+AS  +F LY SG+Y D
Sbjct: 219 DGKCQYDVKNRAATCSKYVELPFGNEEALKEAVANKGPVSVAIDASHPSFFLYRSGVYYD 278

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
           +ACT + VNH +L VGY     ++ W++KN W  H+G+ GY+ + R + N CGIA+Y  Y
Sbjct: 279 KACTLN-VNHGVLAVGYGNYNGKDYWLVKNSWGLHFGEQGYIRMARNSGNHCGIASYPSY 337

Query: 307 ALI 309
             I
Sbjct: 338 PEI 340


>gi|293342577|ref|XP_001065834.2| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|293354413|ref|XP_573976.3| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|149039745|gb|EDL93861.1| rCG24317, isoform CRA_a [Rattus norvegicus]
          Length = 330

 Score =  197 bits (500), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 166/304 (54%), Gaps = 14/304 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y     + +K+  W++N K I+ HN++  +G HG++L  N   DL    + + 
Sbjct: 33  KTKHGKTYNTNE-EGQKRAVWENNMKMINLHNEDYLKGKHGFSLEMNAFGDLTNTEFREL 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVL--IPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           MT     + +   V      E  L  +P  +DWR+ G++TP  NQ  CG+C+AFS   ++
Sbjct: 92  MTGFQGQKTKMMKVFP----EPFLGDVPKTVDWRKHGYVTPVKNQGPCGSCWAFSAVGSL 147

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ+F+ T ++  LS Q +VDCS   GN GC GG       YV+  GGL     YPY+  
Sbjct: 148 EGQVFRKTGKLVPLSEQNLVDCSWSHGNKGCDGGLPDFAFQYVKDNGGLDTSVSYPYEAL 207

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++        +  +  +PP  E+AL   +ATVGPI+V I+    +FQ Y  G+Y +
Sbjct: 208 NGTCRYNPKYSAAKVVGFMSIPPS-ENALMKAVATVGPISVGIDIKHKSFQFYKGGMYYE 266

Query: 252 EACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
             C+S  +NHA+L+VGY   S     W++KN W   WG +GY+ + +  NN CGIA+ A 
Sbjct: 267 PDCSSTNLNHAVLVVGYGEESDGRKYWLVKNSWGRDWGMDGYIKMAKDWNNNCGIASDAS 326

Query: 306 YALI 309
           Y ++
Sbjct: 327 YPIV 330


>gi|238481789|gb|ACR43934.1| cathepsin L-like cysteine proteinase [Haliotis diversicolor
           supertexta]
          Length = 347

 Score =  197 bits (500), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 174/311 (55%), Gaps = 10/311 (3%)

Query: 5   EWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSD 64
           EW+      +K++ + Y K   + ++   ++ N + I  HN++   G   Y L  N  +D
Sbjct: 41  EWVSF----KKQHGRLYEKHEEEEERFEIFKQNLQYIEEHNKKFSLGQKSYYLGINQFAD 96

Query: 65  LHPRHY-IKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACY 123
           +    + +    R  ++  R     +  + E ++ PD +DWR+KG++T   NQ  CG+C+
Sbjct: 97  MKNEEFRMYNGLRRDYNYSREVQCSNHLTPEYLVAPDEVDWRKKGYVTAVKNQGQCGSCW 156

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKE 183
           +FS   +++GQ F  + ++  LS QQ+VDCS   GN GC GG +     Y+   GG+  E
Sbjct: 157 SFSTTGSLEGQHFHKSGKLVSLSEQQLVDCSGKFGNEGCNGGLMDQAFEYIITNGGIETE 216

Query: 184 EDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
           E+YPY  +Q  C FK+  +    S    +   DE  LK ++A VGP++++I+AS  +FQL
Sbjct: 217 EEYPYDARQERCHFKKSEVAATASGCVDVKSGDETDLKNSVAEVGPVSIAIDASHQSFQL 276

Query: 244 YASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRC 298
           Y+ G+YD+  C+S  ++H +L+VGY     ++ W++KN W   WG  GY+ + R  +N+C
Sbjct: 277 YSGGVYDEPKCSSTELDHGVLVVGYGTDDGQDYWLVKNSWGTTWGLEGYVKMSRNQDNQC 336

Query: 299 GIANYAVYALI 309
           G+A  A Y L+
Sbjct: 337 GVATQASYPLV 347


>gi|74222595|dbj|BAE38161.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  197 bits (500), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 157/286 (54%), Gaps = 14/286 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVRSPES 92
           W+ N + I  HN E   G HG+++  N   D+    + + +    H + ++  L + P  
Sbjct: 52  WEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLM 111

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
              + IP  +DWREKG +TP  NQ  CG+C+AFS +  ++GQ+F  T ++  LS Q +VD
Sbjct: 112 ---LKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVD 168

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +     Y++  GGL  EE YPY+ K   CK+ R    V   +  V 
Sbjct: 169 CSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKY-RAEFAVANDTGFVD 227

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
            PQ E AL   +ATVGPI+V+++AS  + Q Y+ GIY +  C+S  ++H +LLVGY    
Sbjct: 228 IPQQEKALMKAVATVGPISVAMDASHPSLQFYSLGIYYEPNCSSKNLDHGVLLVGYGYEG 287

Query: 273 --------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   W++KN W   WG  GY+ + K  +N CG+A  A Y ++
Sbjct: 288 TDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333


>gi|195093046|ref|XP_001997691.1| GH23906 [Drosophila grimshawi]
 gi|193891596|gb|EDV90462.1| GH23906 [Drosophila grimshawi]
          Length = 358

 Score =  197 bits (500), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 158/300 (52%), Gaps = 10/300 (3%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A    ++  + +    +   N     G  G+    N  +DL    ++K++T L 
Sbjct: 60  KTYLNAADRRLREGLFSARKSLVDATNTAFASGASGFEQAVNAFADLTNAEFLKQLTGLR 119

Query: 79  HSRIRRTLVR----SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            S       +    SP   + V +P   DWREKG +TP   Q +CG+C++F+   AI+G 
Sbjct: 120 KSASGEQSAKAHRLSPTVPKGVRVPQSFDWREKGGVTPVKFQGECGSCWSFATTGAIEGH 179

Query: 135 IFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           +F+ T ++  LS Q ++DC  +  G  GC GG      N+VQ   G+ K + YPY  K+ 
Sbjct: 180 VFRKTGKLPNLSEQNLIDCGKMELGLAGCDGGFQEYAFNFVQEQNGIAKGDSYPYLDKKD 239

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            CK+K       I+ ++ + P+DE  +K  +AT GP+A S+N    +  LY  GIYDD+ 
Sbjct: 240 TCKYKSNISGAQITGFAAIEPKDEATMKTVVATQGPLACSVNGL-ESLLLYKHGIYDDKE 298

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           C +  VNH++L+VGY     ++ WI+KN W   WG+ GY  L RG+N CGIA+   Y +I
Sbjct: 299 CNNGEVNHSVLVVGYGSEKGKDFWIVKNSWDKAWGEEGYFRLPRGSNFCGIASECSYPII 358


>gi|195027297|ref|XP_001986520.1| GH21411 [Drosophila grimshawi]
 gi|193902520|gb|EDW01387.1| GH21411 [Drosophila grimshawi]
          Length = 391

 Score =  197 bits (500), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 158/300 (52%), Gaps = 10/300 (3%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A    ++  + +    +   N     G  G+    N  +DL    ++K++T L 
Sbjct: 93  KTYLNAADRRLREGLFSARKSLVDATNTAFASGASGFEQAVNAFADLTNAEFLKQLTGLR 152

Query: 79  HSRIRRTLVR----SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            S       +    SP   + V +P   DWREKG +TP   Q +CG+C++F+   AI+G 
Sbjct: 153 KSASGEQSAKAHRLSPTVPKGVRVPQSFDWREKGGVTPVKFQGECGSCWSFATTGAIEGH 212

Query: 135 IFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           +F+ T ++  LS Q ++DC  +  G  GC GG      N+VQ   G+ K + YPY  K+ 
Sbjct: 213 VFRKTGKLPNLSEQNLIDCGKMELGLAGCDGGFQEYAFNFVQEQNGIAKGDSYPYLDKKD 272

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            CK+K       I+ ++ + P+DE  +K  +AT GP+A S+N    +  LY  GIYDD+ 
Sbjct: 273 TCKYKSNISGAQITGFAAIEPKDEATMKTVVATQGPLACSVNGL-ESLLLYKHGIYDDKE 331

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           C +  VNH++L+VGY     ++ WI+KN W   WG+ GY  L RG+N CGIA+   Y +I
Sbjct: 332 CNNGEVNHSVLVVGYGSEKGKDFWIVKNSWDKAWGEEGYFRLPRGSNFCGIASECSYPII 391


>gi|443724292|gb|ELU12369.1| hypothetical protein CAPTEDRAFT_165495 [Capitella teleta]
          Length = 351

 Score =  197 bits (500), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 167/294 (56%), Gaps = 17/294 (5%)

Query: 29  KKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVR 88
           ++K  +++N KKI  HN    QG   Y +  N  +D+  + +   +     +   RT VR
Sbjct: 62  QRKEVFRNNLKKIEMHNYLHSQGKSSYRMGINQFADMEVKEFASVVNGFRMNN--RTKVR 119

Query: 89  --------SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTS 140
                   SP     V +P  +DWR++G++TP  +Q  CG+C++FS   A++GQ F+ T 
Sbjct: 120 DHLHSHYISPAI--PVSLPAEVDWRKEGYVTPIKDQGHCGSCWSFSTTGALEGQHFRKTG 177

Query: 141 EIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRP 200
           ++  LS Q ++DCS   GN GC GG +     Y++   G   E+ YPY+     C+FK+ 
Sbjct: 178 KLVSLSEQNLIDCSTSYGNNGCNGGVMDYAFQYIKDNDGDDTEDSYPYEAADGPCRFKKE 237

Query: 201 NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVN 260
            +    + ++ LP  DE  +K  +A VGP++V+I+AS  +FQ+Y SG+YD+  C  + ++
Sbjct: 238 YVGATDTGYTDLPKGDEEKMKEAVAMVGPVSVAIDASHTSFQMYQSGVYDEVECDPEGLD 297

Query: 261 HAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           H +L+VGY     ++ W++KN W   WGD GY+ + R  NN+CGI++ A Y L+
Sbjct: 298 HGVLVVGYGTELGQDYWLVKNSWGTKWGDEGYIKMSRNKNNQCGISSMASYPLV 351


>gi|94448666|emb|CAI91571.1| silicatein a2 [Lubomirskia baicalensis]
          Length = 326

 Score =  197 bits (500), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 167/307 (54%), Gaps = 19/307 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  Y K Y  +  + ++   W S+ K I  HN  A   + GY+L  NH  D+    +   
Sbjct: 28  KGSYGKSYASELEELERHSVWLSSRKYIEEHN--AHSDVFGYSLAMNHFGDMSEVEFKDA 85

Query: 74  MTRLTH------SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              LTH      SR   T  ++P+  + V   D +DWR KG +T   NQ DCGA YAF+ 
Sbjct: 86  F--LTHEPGNYTSRGIATF-KAPQGMKYV---DSIDWRTKGAVTSVKNQGDCGASYAFAA 139

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
              ++G    S  +   LS Q ++DCS+  GN GC+GG     + YV   GG+  E  Y 
Sbjct: 140 TGTMEGANALSNDKQVSLSEQNIIDCSVPYGNHGCSGGDTYTAIKYVVDNGGIDTESSYS 199

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           ++GKQS C++   N     +    +P   E  L   +ATVGP+AV+++A+ + F+ Y SG
Sbjct: 200 FRGKQSSCQYNSKNSGASATGAVGIPYGSESDLMAAVATVGPVAVAVDANTNAFRFYQSG 259

Query: 248 IYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIAN 302
           ++D   C+S  +NHAML+ GY     ++ W++KN W  +WGDNGY+ + R   N+CGIA+
Sbjct: 260 VFDSSTCSSTKLNHAMLVTGYGSYNGKDYWLVKNSWGKYWGDNGYIMMVRNKYNQCGIAS 319

Query: 303 YAVYALI 309
            A+Y+++
Sbjct: 320 DALYSML 326


>gi|293342574|ref|XP_002725265.1| PREDICTED: cathepsin Q-like isoform 2 [Rattus norvegicus]
 gi|79152841|gb|AAI07914.1| Ctsq protein [Rattus norvegicus]
 gi|149039734|gb|EDL93850.1| rCG24269 [Rattus norvegicus]
          Length = 343

 Score =  197 bits (500), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/314 (36%), Positives = 172/314 (54%), Gaps = 21/314 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + KY+K Y  +  +  K++ W+ N KKI  HN+E   G + Y +  N  +DL    +   
Sbjct: 33  KMKYEKLYSPEE-ELLKRVVWEENVKKIELHNRENSLGKNTYIMEINDFADLTDEEFKDM 91

Query: 74  MTRLT-------HSRIRRTLVRS-PES-NESVLIPDHLDWREKGFITPDWNQEDCGACYA 124
           +T +T        S  +R L  S P S      +P  +DWR++G++T    Q  C +C+A
Sbjct: 92  ITGITLPINNTMKSLWKRALGSSLPNSWYWRDALPKFVDWRKEGYVTHVRVQGRCNSCWA 151

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           F +  AI+GQ+FK T ++  LS+Q +VDCS   GN GC GG+  N   YV   GGL  E 
Sbjct: 152 FPVVGAIEGQMFKKTGKLTPLSVQNLVDCSKPQGNKGCRGGTTYNAFQYVLQNGGLESEA 211

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY+GK+ +C++   N    I+ +  L P++E  L   +AT GP+A  I+    + + Y
Sbjct: 212 TYPYEGKEGLCRYNPNNSSAKITRFVAL-PENEDVLMDAVATKGPVAAGIHVVHSSLRFY 270

Query: 245 ASGIYDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGN 295
             GIY +  C ++YVNHA+L+VGY          N W+++N W   WG NGYM + K  N
Sbjct: 271 KKGIYHEPKC-NNYVNHAVLVVGYGFEGNETDGNNYWLIQNSWGERWGLNGYMKIAKDRN 329

Query: 296 NRCGIANYAVYALI 309
           N CGIA +A Y ++
Sbjct: 330 NHCGIATFAQYPIV 343


>gi|312386081|gb|ADQ74585.1| silicatein alpha 2 [Lubomirskia baicalensis]
          Length = 326

 Score =  197 bits (500), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 166/307 (54%), Gaps = 19/307 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  Y K Y  +  + ++   W SN K    HN  A   + GY+L  NH  D+    +   
Sbjct: 28  KGSYGKSYASELEELERHSVWLSNRKYTEEHN--AHSDVFGYSLAMNHFGDMSEVEFKDA 85

Query: 74  MTRLTH------SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              LTH      SR   T  ++P+  + V   D +DWR KG +T   NQ DCGA YAF+ 
Sbjct: 86  F--LTHEPGNYTSRGIATF-KAPQGMKYV---DSIDWRTKGAVTSVKNQGDCGASYAFAA 139

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
              ++G    S  +   LS Q ++DCS+  GN GC+GG     + YV   GG+  E  Y 
Sbjct: 140 TGTMEGANALSNDKQVSLSEQNIIDCSVPYGNHGCSGGDTYTAIKYVVDNGGIDTESSYS 199

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           ++GKQS C++   N     +    +P   E  L   +ATVGP+AV+++A+ + F+ Y SG
Sbjct: 200 FRGKQSSCQYNSKNSGASATGAVGIPYGSESDLMAAVATVGPVAVAVDANTNAFRFYQSG 259

Query: 248 IYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIAN 302
           ++D   C+S  +NHAML+ GY     ++ W++KN W  +WGDNGY+ + R   N+CGIA+
Sbjct: 260 VFDSSTCSSTKLNHAMLVTGYGSYNGKDYWLVKNSWGKYWGDNGYIMMVRNKYNQCGIAS 319

Query: 303 YAVYALI 309
            A+Y+++
Sbjct: 320 DALYSML 326


>gi|225718114|gb|ACO14903.1| Cathepsin L precursor [Caligus clemensi]
          Length = 336

 Score =  197 bits (500), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 101/283 (35%), Positives = 159/283 (56%), Gaps = 7/283 (2%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           +  N  KI  HN EA  G+H Y ++ NH  DL    ++  +    ++    +L  +   N
Sbjct: 54  YMENSLKISRHNSEALNGIHPYYMKMNHYGDLLHHEFVAMVNGYQYANKTASLGGTYIPN 113

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
           +++ +P H+DWRE+G +TP  NQ  CG+C++FS   A++GQ F+ T ++  LS Q +VDC
Sbjct: 114 KNIQLPTHVDWREEGAVTPVKNQGQCGSCWSFSATGALEGQDFRKTGKLISLSEQNLVDC 173

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GN GC GG +     Y++   G+  E  YPY+G    C +   N       +  + 
Sbjct: 174 SRKFGNNGCEGGLMDFAFTYIRDNKGIDTEASYPYEGIDGHCHYNPKNKGGSDIGFVDIK 233

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
              E  LK  +A VGPI+V+I+AS  +FQ Y+ G+Y +  C+S+ ++H +L+VG+  +S 
Sbjct: 234 KGSEKDLKKAVAGVGPISVAIDASHMSFQFYSHGVYVESKCSSEELDHGVLVVGFGTDSV 293

Query: 273 -----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
                W++KN WS  WGD GY+ + R   N CGIA+ A Y ++
Sbjct: 294 SGEDYWLVKNSWSEKWGDQGYIKMARNKENMCGIASSASYPVV 336


>gi|167521499|ref|XP_001745088.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776702|gb|EDQ90321.1| predicted protein [Monosiga brevicollis MX1]
          Length = 294

 Score =  196 bits (499), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 113/304 (37%), Positives = 165/304 (54%), Gaps = 19/304 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  Y K Y  +A ++K+   +++N + I+ HN E  QGLH YT+  N  +DL    +   
Sbjct: 2   KSDYSKSYESEAVEAKRLAAFEANLEFINKHNAEHAQGLHSYTVGVNEFADLTIDEF--- 58

Query: 74  MTRLTHSRIRRTL----VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           M     S+  RT+    V  P ++E     D +DWR KG +TP  NQ  CG+C++FS   
Sbjct: 59  MALYVPSKFNRTMPYNTVYLPATSE-----DSVDWRTKGAVTPIKNQGQCGSCWSFSTTG 113

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           + +G    +T  +  LS QQ+VDCS   GN GC GG + +   Y+    GL  EEDYPY 
Sbjct: 114 STEGAHAIATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDDAFKYIISNKGLDTEEDYPYT 173

Query: 190 GKQSIC-KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            +   C K K       ISS+S +P  +E  L   +A  GP++V+I A    FQLY SG+
Sbjct: 174 AQDGTCNKEKEAKHAATISSYSDVPKNNEDQLAAAVAK-GPVSVAIEADQSGFQLYKSGV 232

Query: 249 YDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRG---NNRCGIANYAV 305
           +D    T+  ++H +L+VGYT + WI+KN W   WG  GY+ +KRG   +  CGIA    
Sbjct: 233 FDGNCGTN--LDHGVLVVGYTDDYWIVKNSWGTTWGVEGYINMKRGVSASGICGIAMQPS 290

Query: 306 YALI 309
           Y ++
Sbjct: 291 YPIV 294


>gi|449679414|ref|XP_002161570.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 353

 Score =  196 bits (499), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/320 (37%), Positives = 172/320 (53%), Gaps = 21/320 (6%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           M N EW    I    K+ K Y  +  ++ K L+W+ N++ I  HN E     H + +  N
Sbjct: 44  MKNPEWRRFKI----KFGKFYSNQDEETSKYLNWKKNNENIINHNSEN----HSFEIGIN 95

Query: 61  HLSDLHPRHYIK---EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQE 117
             SDL    ++K      +L+ S +  T   S  +   V IPD +DWR +G++TP  NQ 
Sbjct: 96  QFSDLTHEEFMKIHGGCLKLSKSIVNFTKEFSLPN--KVNIPDKVDWRTEGYVTPVKNQG 153

Query: 118 DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177
            C +C+AFS   A++GQ F+ T  +  LS Q +VDCS   GN GC GG   N   Y++  
Sbjct: 154 LCRSCWAFSTTGALEGQTFRKTGILPTLSEQNLVDCSKSYGNQGCDGGWTNNAFEYIKDN 213

Query: 178 GGLMKEEDYPYKGKQ-SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINA 236
            GL  E  YPY  K+   C +         S +  +P  DE ALK  +ATVGPIAV+I+A
Sbjct: 214 DGLDSENGYPYDAKELGYCYYDEKYKEASDSGFVEIPYGDEDALKEAVATVGPIAVNIDA 273

Query: 237 SPHTFQLYASGIYDDEACTSDYVN--HAMLLVGYTRNS----WILKNWWSHHWGDNGYMY 290
           S  +FQ Y SG+Y++  C +   N  HA+L+VGY        W++KN W   WGD+GY+ 
Sbjct: 274 SKPSFQSYKSGVYNEPTCGNGITNLTHAVLVVGYGTEKGHKFWLVKNSWGKTWGDHGYIK 333

Query: 291 LKRG-NNRCGIANYAVYALI 309
           + R  +N+CGIA  A + L+
Sbjct: 334 MSRNKSNQCGIATRASFPLV 353


>gi|344257452|gb|EGW13556.1| Cathepsin L1 [Cricetulus griseus]
          Length = 290

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 161/291 (55%), Gaps = 13/291 (4%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL 86
           + +K+  W++N K I  HN++  +G HG+ L  N   DL    + + MT       +   
Sbjct: 5   EGQKRAVWENNRKMIELHNEDYTKGKHGFHLEMNAFGDLTNIEFRQLMTGFQSMGTKEMN 64

Query: 87  VRSPESNESVL--IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEE 144
           V      E +L  +P  +DWR   ++TP  +Q  C +C+AFS   +++GQIF+ T ++  
Sbjct: 65  V----FQEPLLGDVPKSVDWRNLSYVTPVKDQGQCSSCWAFSAVGSLEGQIFRKTGQLIS 120

Query: 145 LSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVV 204
           LS Q +VDCS   GN+GC GG +     YV+   GL     YPY+ +   C++   N   
Sbjct: 121 LSEQNLVDCSWSYGNIGCFGGLMEYAFRYVKENRGLDTRVSYPYEARNGPCRYDPKNSAA 180

Query: 205 DISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAML 264
           +++ + V  P  E AL   +ATVGPI+V +++  H+F+ Y  G+Y +  C+S  ++HA+L
Sbjct: 181 NVTDF-VKIPISEDALMKAVATVGPISVGVDSHHHSFRFYKGGMYYEPHCSSSNLDHAVL 239

Query: 265 LVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           +VGY   S     W++KN W   WG NGY+ + R  NN CGIA YA+Y  +
Sbjct: 240 VVGYGEESDGNKYWMVKNSWGQGWGMNGYIKMARDRNNNCGIATYAIYPTV 290


>gi|444515095|gb|ELV10757.1| Aryl hydrocarbon receptor nuclear translocator [Tupaia chinensis]
          Length = 786

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/272 (39%), Positives = 153/272 (56%), Gaps = 13/272 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y  K  +  ++L W+ N K I  HN EA  G+H Y L  NHL D+     +++
Sbjct: 519 KKTYGKQYNSKVDEISRRLTWEKNLKYISIHNLEASLGIHTYELAMNHLGDMTSEEVVQK 578

Query: 74  MTRL----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           MT L    +HS    TL        +   PD +D+R+KG++TP  NQ  CG+C+AFS   
Sbjct: 579 MTGLKVPPSHSLSNDTLYIPDWEGRT---PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG 635

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ+ K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY 
Sbjct: 636 ALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV 693

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y
Sbjct: 694 GQDESCMYNPTGKAAKCRGYREIPVGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 753

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKN 277
            DE C+SD VNHA+L VGY        WI+KN
Sbjct: 754 YDENCSSDNVNHAVLAVGYGVQKGSKHWIIKN 785


>gi|405977173|gb|EKC41636.1| Cathepsin K [Crassostrea gigas]
          Length = 942

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 167/315 (53%), Gaps = 20/315 (6%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLH---WQSNHKKIHTHNQEAQQGLHGYTLRE 59
           +KEW        + +K+ Y K  T+  +K+    W  N   I+ HN+EA  G H Y L  
Sbjct: 640 DKEW--------EDFKRIYSKTYTEQDEKIRKSIWIQNIDIINRHNKEADMGHHSYRLGM 691

Query: 60  NHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDC 119
           N   D+  +     +               P +N  + +P+ ++W ++G++TP  NQ  C
Sbjct: 692 NEFGDMTTKEVTGMLNVPKGYATDNVSTFLPPNN--LQLPETVNWTKEGYVTPVKNQGYC 749

Query: 120 GACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGG 179
           G+C+AF+    ++GQ F+ T ++  LS Q +VDC     NLGC GG       Y+   GG
Sbjct: 750 GSCWAFATTGGLEGQHFRKTKKLVSLSEQNLVDCC--KENLGCTGGLPVTAYKYIARNGG 807

Query: 180 LMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
           +  EE YPY GK   C F+ P I      +  +P  DE  L+  +A+VGP+ VSI+AS  
Sbjct: 808 IDTEESYPYLGKNGNCTFRPPKIGATCQGFVRVPAGDEVGLQKAVASVGPVTVSIDASLK 867

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG- 294
           +F LY  G+YDD+ C+    NH +L+VGY ++     W++KN W   +G +GY+ + R  
Sbjct: 868 SFYLYKEGVYDDKKCSKKMFNHFVLIVGYGKHLGKEYWLVKNSWGMSFGMDGYIMMARNQ 927

Query: 295 NNRCGIANYAVYALI 309
           +N+CGI+N  VY ++
Sbjct: 928 DNQCGISNQPVYPIV 942


>gi|405963298|gb|EKC28885.1| Cathepsin L [Crassostrea gigas]
          Length = 265

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 154/269 (57%), Gaps = 11/269 (4%)

Query: 47  EAQQGLHGYTLRENHLSDLHPRHYIKEMTRL-THSRIRRTLVRSPESNESVLIPDHLDWR 105
           EA  G H Y L  N   D+  R     +     HS +  +    P +   + +PD +DW 
Sbjct: 2   EADNGHHSYRLGMNEFGDMTSREMAAMLNGARGHSVVNGSTFLPPNN---LQLPDTVDWS 58

Query: 106 EKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGG 165
           ++G++TP  NQ  CG+C+AFS    ++GQ ++ T ++  LS Q ++DCS    N+GC GG
Sbjct: 59  KEGYVTPVKNQGQCGSCWAFSTTGGLEGQHYRKTGKLVSLSEQNLLDCS--KENMGCNGG 116

Query: 166 SLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLA 225
             +    Y++  GG+  EE YPY GK+  C F+   +    + +  +   DE ALK  +A
Sbjct: 117 LPQKAYKYIKENGGIDTEESYPYLGKKETCSFRPSEVGATCTGFVQVTAGDELALKKAVA 176

Query: 226 TVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSH 281
           +VGPI V I+AS  +FQLY  G+YD+++C     +HA+L+VGY     ++ W++KN W  
Sbjct: 177 SVGPITVCIDASQPSFQLYKGGVYDEQSCNPIVFDHAVLIVGYGVYQGKDYWLVKNSWGT 236

Query: 282 HWGDNGYMYLKRG-NNRCGIANYAVYALI 309
            WG +GY+ + R  NN+CGIAN+AVY  +
Sbjct: 237 SWGMDGYIMMSRNQNNQCGIANHAVYPTV 265


>gi|355681664|gb|AER96818.1| cathepsin S [Mustela putorius furo]
          Length = 338

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/300 (36%), Positives = 165/300 (55%), Gaps = 10/300 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y + Y++K  +  ++L W+ N K +  HN E   G+H Y L  NHL+D+        
Sbjct: 40  KKTYGRQYQEKNEEVARRLIWEKNLKSVMLHNLEYSMGMHSYDLGMNHLADMTSEEVSSL 99

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +  +     SN+   +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 100 MSSLRVPSQWQANVTYKSNSNQK--LPDSVDWREKGCVTEVKYQGACGACWAFSAVGALE 157

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T  +  LS Q +VDCS    GN GC GG +     Y+    G+  E  YPYK  
Sbjct: 158 AQLKLKTGNLVSLSAQNLVDCSTERYGNKGCNGGFMTKAFQYIIDNNGIDSEVSYPYKAM 217

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   +     S ++ LP   E ALK  +A  GP++V+I+A   +F LY SG+Y D
Sbjct: 218 DGNCRYDSKHRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDAKHSSFFLYKSGVYYD 277

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +CT + VNH +L+VGY     R+ W++KN W  ++G+ GY+ + R + N CGIA+Y  Y
Sbjct: 278 PSCTQN-VNHGVLVVGYGNLNGRDYWLVKNSWGLNFGEQGYIRMARNSGNHCGIASYPSY 336


>gi|198427748|ref|XP_002130282.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 340

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 169/319 (52%), Gaps = 12/319 (3%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           N++ + +F   +  +KK Y+    + +K   W +N  KI  HN +       Y L  N  
Sbjct: 22  NQQHVSLFQTWKNLWKKVYQTVEEEEQKMATWFNNWNKISEHNMQYSLKQKSYRLEMNEY 81

Query: 63  SDLHPRHYIKEMTRLTHS-RIRR------TLVRSPESNESVLIPDHLDWREKGFITPDWN 115
            DL    +   M    +  R++R      T +        + +P  +DWR+ G +TP  N
Sbjct: 82  GDLTSEEFSSMMNGYRNDIRLKRKSTGGSTYLNLLSFGSQIQLPTLVDWRKHGLVTPVKN 141

Query: 116 QEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQ 175
           Q  CG+C++FS   +++GQ  K T ++  LS Q ++DCS   GN GC GG +     Y++
Sbjct: 142 QGQCGSCWSFSATGSLEGQHKKKTGKLVSLSEQNLIDCSTPEGNDGCNGGLMDQAFKYIK 201

Query: 176 FAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSIN 235
             GG+  E  YPY+ K   C+F   +     + +  +   DE  LK   ATVGPI+V+I+
Sbjct: 202 IQGGIDTEAYYPYEAKDDTCRFNITDSGATDTGFVDIKSGDEEMLKEAAATVGPISVAID 261

Query: 236 ASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYL 291
           AS  +FQ Y++G+Y + AC+S  ++H +L+VGY     ++ W++KN W   WG+ GY+ +
Sbjct: 262 ASHTSFQFYSNGVYSETACSSTMLDHGVLVVGYGTENGKDYWLVKNSWGEGWGEAGYIKM 321

Query: 292 KR-GNNRCGIANYAVYALI 309
            R  +N+CGIA  A Y L+
Sbjct: 322 SRNADNQCGIATQASYPLV 340


>gi|389610697|dbj|BAM18960.1| cathepsin L [Papilio polytes]
          Length = 341

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 107/326 (32%), Positives = 173/326 (53%), Gaps = 23/326 (7%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW    +  QK+Y  +   K    + K++ ++ HK I  HNQ+  +G   + +++N
Sbjct: 22  LVKEEWNAFKMEHQKQYDSEVEDKF---RMKIYAENKHK-IAKHNQKFARGQVPFRVKQN 77

Query: 61  HLSDLHPRHYIKEMTRLTH-----------SRIRRTLVRSPESNESVLIPDHLDWREKGF 109
              D+    ++  M                S   R     P +N  V +PDH+DWR+ G 
Sbjct: 78  KYGDMLHHEFVHTMNGFNKTTKNGKGLFGKSAGERGATFIPPAN--VRVPDHVDWRKHGA 135

Query: 110 ITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRN 169
           +T   +Q  CG+C++FS   A++GQ ++ T+ +  LS Q ++DCS   GN GC GG + N
Sbjct: 136 VTEVKDQGKCGSCWSFSATGALEGQHYRQTNILVSLSEQNLIDCSTAYGNNGCNGGLMDN 195

Query: 170 TLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGP 229
              Y++   G+  E+ YPY+     C++   N   D   +  +P  DE  L   +ATVGP
Sbjct: 196 AFKYIKDNKGIDTEKSYPYEAVDDKCRYNPRNSGADDVGFIDIPSGDEGKLMAAVATVGP 255

Query: 230 IAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWG 284
           ++V+I+AS  TFQ Y+ G+Y DE C+S  ++H +L+VGY  +      W++KN W   WG
Sbjct: 256 VSVAIDASQETFQFYSDGVYFDENCSSTSLDHGVLVVGYGTDENGGDYWLVKNSWGRSWG 315

Query: 285 DNGYMYLKRG-NNRCGIANYAVYALI 309
           D GY+ + R  +N CGIA  A + L+
Sbjct: 316 DLGYIKMARNRDNHCGIATAASFPLV 341


>gi|354502595|ref|XP_003513369.1| PREDICTED: cathepsin L1-like [Cricetulus griseus]
          Length = 330

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 161/291 (55%), Gaps = 13/291 (4%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL 86
           + +K+  W++N K I  HN++  +G HG+ L  N   DL    + + MT       +   
Sbjct: 45  EGQKRAVWENNRKMIELHNEDYTKGKHGFHLEMNAFGDLTNIEFRQLMTGFQSMGTKEMN 104

Query: 87  VRSPESNESVL--IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEE 144
           V      E +L  +P  +DWR   ++TP  +Q  C +C+AFS   +++GQIF+ T ++  
Sbjct: 105 V----FQEPLLGDVPKSVDWRNLSYVTPVKDQGQCSSCWAFSAVGSLEGQIFRKTGQLIS 160

Query: 145 LSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVV 204
           LS Q +VDCS   GN+GC GG +     YV+   GL     YPY+ +   C++   N   
Sbjct: 161 LSEQNLVDCSWSYGNIGCFGGLMEYAFRYVKENRGLDTRVSYPYEARNGPCRYDPKNSAA 220

Query: 205 DISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAML 264
           +++ + V  P  E AL   +ATVGPI+V +++  H+F+ Y  G+Y +  C+S  ++HA+L
Sbjct: 221 NVTDF-VKIPISEDALMKAVATVGPISVGVDSHHHSFRFYKGGMYYEPHCSSSNLDHAVL 279

Query: 265 LVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           +VGY   S     W++KN W   WG NGY+ + R  NN CGIA YA+Y  +
Sbjct: 280 VVGYGEESDGNKYWMVKNSWGQGWGMNGYIKMARDRNNNCGIATYAIYPTV 330


>gi|197258082|gb|ACH56225.1| cathepsin L-like cysteine proteinase [Bursaphelenchus xylophilus]
          Length = 282

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/282 (36%), Positives = 160/282 (56%), Gaps = 20/282 (7%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL--- 97
           +  HN    QG   + +  NH++DL       E  RL  +  RRT   +  S  +     
Sbjct: 6   VKVHNDAYAQGKVSFKIGINHIADLP----FAEYRRL--NGFRRTFGDNIASRNATKWRA 59

Query: 98  -----IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
                +PD +DWR++G++TP  NQ  CG+C+AFS   +++GQ  ++T ++  LS Q +VD
Sbjct: 60  PLNFEVPDAVDWRDEGYVTPVKNQGMCGSCWAFSATGSLEGQHKRATGKLVSLSEQNLVD 119

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN GC GG +     YV+   G+  EE YPYK KQ  C F++ N+  D + +  L
Sbjct: 120 CSADFGNNGCNGGLMDFAFEYVKQNHGIDTEESYPYKAKQKKCHFQKANVGADDTGFVDL 179

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
           P  DE  LK  +A+ GP++V+I+A   +F+LY +G+Y ++ C+ + ++H +L+VGY  + 
Sbjct: 180 PEADEEQLKAAVASQGPVSVAIDAGHRSFRLYKTGVYYEKHCSPEQLDHGVLVVGYGTDP 239

Query: 273 -----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
                WI+KN W   WG+ GY+ + R  NN CGIA+ A Y L
Sbjct: 240 EHGDYWIVKNSWGEEWGEKGYVRIARNRNNHCGIASKASYPL 281


>gi|261289785|ref|XP_002611754.1| hypothetical protein BRAFLDRAFT_284341 [Branchiostoma floridae]
 gi|229297126|gb|EEN67764.1| hypothetical protein BRAFLDRAFT_284341 [Branchiostoma floridae]
          Length = 327

 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 164/299 (54%), Gaps = 8/299 (2%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR-- 76
           K Y+    ++ ++  ++ N++ I  HNQEA  G   Y +  N   DL    Y++ +    
Sbjct: 29  KQYKSPDEENVRRAIFRDNNQMIKEHNQEAAMGRRSYFMGMNQFGDLAHSEYLELVVGPG 88

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L    +        ES   + + D +DWR+KG +TP  +Q  CG+C+AFS   +++GQ F
Sbjct: 89  LLPLNLSTPSENVFESTPGLQVDDTVDWRQKGAVTPIKDQGHCGSCWAFSTTGSLEGQHF 148

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK-QSIC 195
             T ++  LS Q ++DCS   GN GC GG +     Y++  GG+  EE YPY  K + +C
Sbjct: 149 MKTGKLVSLSEQNLLDCSRRFGNKGCEGGLMDQAFRYIKSNGGIDTEECYPYMAKDEKVC 208

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
            +K       +SS++ +   DE AL   + TVGP++V+I+AS  + + Y SGIYD+  C+
Sbjct: 209 DYKTSCSGATLSSYTDIKAMDEMALMQAVGTVGPVSVAIDASHKSLRFYKSGIYDEPECS 268

Query: 256 SDYVNHAMLLVGYTR----NSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
              ++H +L VGY      + W++KN W   WGD GY+ + R  NN+CGIA  A Y ++
Sbjct: 269 RTKLDHGVLAVGYGSMDGMDYWLVKNSWGSAWGDMGYVKMTRNKNNQCGIATKASYPVV 327


>gi|348531517|ref|XP_003453255.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 330

 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 173/303 (57%), Gaps = 13/303 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE-- 73
           K++K Y   + ++++K  W +N K +  HN  A QGL  + L   + +D+    Y K   
Sbjct: 32  KFEKSYDSSSEETQRKQIWLTNRKLVLKHNALADQGLKSFRLGMTYFADMENEEYKKLGC 91

Query: 74  MTRLTHSRIRR--TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +     S   R  TL R P+     ++P  +DWRE+G++T   +Q+ CG+C+AFS   A+
Sbjct: 92  LGSFNASLPCRASTLNRLPKV---TVLPKTVDWREQGYVTDVKHQQQCGSCWAFSATGAL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ FK T  +  LS QQ+VDCS    N GC GG       Y++  GG+  E+ Y Y+ K
Sbjct: 149 EGQHFKKTGTLVPLSEQQLVDCSRKYRNNGCDGGEPNWAFQYIRDNGGVDTEKSYRYEAK 208

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C+++  +I    + +  + P +E AL   +AT+GPI+VSI+ S  +FQLY SG+YD+
Sbjct: 209 DGQCRYRSNSIGAKCNGYVDVSPFEE-ALMEAVATIGPISVSIDDSRVSFQLYQSGVYDE 267

Query: 252 EACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
             C++  +NHA+L VGY T N    W++KN W   WG+ GY+ + R   N+CGIA  A Y
Sbjct: 268 PWCSNINLNHAVLAVGYGTENGHDYWLVKNSWGSGWGNKGYIKMTRNKGNQCGIATEASY 327

Query: 307 ALI 309
            L+
Sbjct: 328 PLV 330


>gi|312381833|gb|EFR27483.1| hypothetical protein AND_05794 [Anopheles darlingi]
          Length = 344

 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/327 (34%), Positives = 170/327 (51%), Gaps = 22/327 (6%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW    +  +KKY  +  ++    + K++ Q+ HK I  HNQ    G   + LR N
Sbjct: 22  LVKEEWNAFKLQHRKKYDSESEERI---RMKIYVQNKHK-IAKHNQRYDLGQEKFRLRVN 77

Query: 61  HLSDLHPRHYIKEMTRLTHSRI-------RRTLVRSPE-----SNESVLIPDHLDWREKG 108
             +DL    ++  +     S         R  L+   E        +V +P  +DWREKG
Sbjct: 78  KYADLLHEEFVHTLNGFNRSAAAGSKLLGREQLMTIEEPITWIEPANVDVPTTIDWREKG 137

Query: 109 FITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLR 168
            +TP  +Q  CG+C++FS   A++GQ F+ T ++  LS Q +VDCS   GN GC GG + 
Sbjct: 138 AVTPVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKYGNNGCNGGLMD 197

Query: 169 NTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVG 228
           N   YV+   G+  E+ YPY+     C +    I      +  +P  DE ALK  LATVG
Sbjct: 198 NAFQYVKDNKGIDTEKAYPYEAIDDECHYNPKAIGATDKGFVDIPQGDEKALKKALATVG 257

Query: 229 PIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHW 283
           P++V+I+AS  +FQ Y+ G+Y +  C S+ ++H +L VGY       + W++KN W   W
Sbjct: 258 PVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGYGTTEDGEDYWLVKNSWGTTW 317

Query: 284 GDNGYMYLKRG-NNRCGIANYAVYALI 309
           GD GY+ + R   N CGIA  A Y L+
Sbjct: 318 GDQGYVKMARNRENHCGIATTASYPLV 344


>gi|27960480|gb|AAO27844.1|AF456460_1 cathepsin Q2 [Rattus norvegicus]
          Length = 343

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/312 (36%), Positives = 170/312 (54%), Gaps = 21/312 (6%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY+K Y  +  +  K++ W+ N KKI  HN+E   G + Y +  N  +DL    +   +T
Sbjct: 35  KYEKLYSPEE-ELLKRVVWEENVKKIELHNRENSLGKNTYIMEINDFADLTDEEFKDMIT 93

Query: 76  RLT-------HSRIRRTLVRS-PES-NESVLIPDHLDWREKGFITPDWNQEDCGACYAFS 126
            +T        S  +R L  S P S      +P  +DWR++G++T    Q  C +C+AF 
Sbjct: 94  GITLPINNTMKSLWKRALGSSLPNSWYWRDALPKFVDWRKEGYVTHVRVQGRCNSCWAFP 153

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
           +  AI+GQ+FK T ++  LS+Q +VDCS   GN GC GG+  N   YV   GGL  E  Y
Sbjct: 154 VVGAIEGQMFKKTGKLTPLSVQNLVDCSKPQGNKGCRGGTTYNAFQYVLQNGGLESEATY 213

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY+GK+ +C++   N    I+ +  L P++E  L   +AT GP+A  I+    + + Y  
Sbjct: 214 PYEGKEGLCRYNPNNSSAKITRFVAL-PENEDVLMDAVATKGPVAAGIHVVHSSLRFYKK 272

Query: 247 GIYDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNR 297
           GIY +  C ++YVNHA+L+VGY          N W+++N W   WG NGYM + K  NN 
Sbjct: 273 GIYHEPKC-NNYVNHAVLVVGYGFEGNETDGNNYWLIQNSWGERWGLNGYMKIAKDRNNH 331

Query: 298 CGIANYAVYALI 309
           CGIA +A Y  +
Sbjct: 332 CGIATFAQYPTV 343


>gi|156554647|ref|XP_001605314.1| PREDICTED: cathepsin L-like [Nasonia vitripennis]
          Length = 353

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 169/310 (54%), Gaps = 18/310 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +YKK+Y     ++ ++  +  N +KI  HNQ+   GL  Y +R N   D+    Y   M 
Sbjct: 46  RYKKNYNGDVEENFRRSVFHENQRKIAEHNQKHDLGLFTYKVRINQFGDMMFEEYKNYMH 105

Query: 76  RLTHSRIRRTLVRSPESNESVL------IPDHLDWREKGFITPDWNQE-DCGACYAFSIA 128
              ++  +  L R P  +E +       +P+H+DWR++G +TP  +Q   CG+C+AFS A
Sbjct: 106 AANNTITQ--LKRIPRGDEFIKPKSAENVPEHVDWRQRGAVTPVRDQGLTCGSCWAFSAA 163

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++ Q FK T  +  LS Q ++DC++  GNLGC GGS   +  +V    GL  E +Y Y
Sbjct: 164 GALEAQYFKKTGVLTALSAQNLIDCTMEYGNLGCGGGSAALSFQFVVDQKGLEPEANYSY 223

Query: 189 KGKQSICKFKRPNIVVD--ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           +G+   C +   +   +   +S+  +   DE  LKV +ATVGP + +I+ S  TF+ Y+ 
Sbjct: 224 EGRTKECPYNTSDDEDEELDASFIYVNGGDEATLKVAVATVGPFSAAIDGSHDTFRFYSE 283

Query: 247 GIYDDEACTSDYVNHAMLLVGYTRNS------WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
           G+Y    C  D ++HA+L+VGY  ++      W++KN W   WG+ GY  + R   N CG
Sbjct: 284 GVYYQPECNEDDLDHAVLIVGYGTDNRTDQDFWLVKNSWGETWGEGGYFKVARNRRNHCG 343

Query: 300 IANYAVYALI 309
           IA  AVY +I
Sbjct: 344 IAAAAVYPVI 353


>gi|242020003|ref|XP_002430447.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
 gi|212515585|gb|EEB17709.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
          Length = 345

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 175/322 (54%), Gaps = 27/322 (8%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW +     + ++KK+Y     +  +   +  N +KI  HN + Q+G  GY L  N
Sbjct: 22  LVMEEWQLF----KAEHKKNYNNDVEEKFRMKIFMDNKQKITKHNTKYQRGEVGYKLGLN 77

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRS------------PESNESVLIPDHLDWREKG 108
             SD+    +I        S I   L  +            P +N  V +P H+DW + G
Sbjct: 78  KYSDMLHHEFINTFNGFNKSIIPPHLRSNNGKTHLKGSFFIPPAN--VKLPKHVDWVKLG 135

Query: 109 FITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLR 168
            +TP  +Q  CG+C+AFS   A++G  F+ T  +  LS Q ++DCS   GN GC GG + 
Sbjct: 136 AVTPVKDQGHCGSCWAFSATGALEGLHFRKTKVLVSLSEQNLIDCSTEEGNNGCNGGLMD 195

Query: 169 NTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVG 228
               YV+  GG+  E  YPY+G   +C+++  N     + ++ +P  DE ALK  +ATVG
Sbjct: 196 QAFQYVRINGGIDTERSYPYEGNNDVCRYEPENSGAIDTGYTDVPLGDEDALKSAVATVG 255

Query: 229 PIAVSINASPHTFQLYASGIYDDEACTS--DYVNHAMLLVGY------TRNSWILKNWWS 280
           P++V+I+AS  +FQLY+SG+Y +  C +  + ++H +L+VGY       ++ W++KN W 
Sbjct: 256 PVSVAIDASQESFQLYSSGVYFEPNCKNEPESLDHGVLVVGYGTDEETQQDYWLVKNSWG 315

Query: 281 HHWGDNGYMYLKR-GNNRCGIA 301
             WG+NGY+ + R  +N+CGIA
Sbjct: 316 DSWGENGYIKMARNADNQCGIA 337


>gi|72005575|ref|XP_783218.1| PREDICTED: cathepsin L2-like isoform 2 [Strongylocentrotus
           purpuratus]
 gi|390337647|ref|XP_003724610.1| PREDICTED: cathepsin L2-like isoform 1 [Strongylocentrotus
           purpuratus]
          Length = 334

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 166/313 (53%), Gaps = 14/313 (4%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           KEW+         + K+Y     + ++++ W+ N + I  HN E  QG   Y L  N   
Sbjct: 29  KEWV-------DYHGKEYSAMGEEMERRMIWEDNLRIITKHNLEHSQGKTTYRLGMNEFG 81

Query: 64  DLHPRHYIKEMTRLTHSRIRRTLVRSP-ESNESVLIPDHLDWREKGFITPDWNQEDCGAC 122
           D+    ++   T    S + +    S    +E + +PD +DWR +G++TP  +Q  CG+C
Sbjct: 82  DMTNAEFVATRTMKKMSGVPKVGQGSTFLPSEFLQLPDSVDWRTEGYVTPVKDQGQCGSC 141

Query: 123 YAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMK 182
           +AFS   A++GQ F  T  +  LS Q +VDCS   GN GC GG       Y++  GG+  
Sbjct: 142 WAFSTVGALEGQHFVKTGTLVSLSEQNLVDCSQAEGNDGCNGGWPAWADEYIKSNGGIDT 201

Query: 183 EEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
           E  YPY+G    C ++  ++   I+ ++ +    E AL+  LA VGPI+V I+A+  +FQ
Sbjct: 202 EVGYPYEGVDDSCHYRTSDVGATITGFAEVEADSEKALEKALAQVGPISVCIDATQPSFQ 261

Query: 243 LYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRGNNR 297
           LY SG+YD+  C+S  ++H +  VGY   +     +I+KN W   WG  GY+++ R   +
Sbjct: 262 LYESGVYDEPDCSSTALDHCVTAVGYDSTADGDKYYIVKNSWGTTWGQEGYIWMSRDKQK 321

Query: 298 -CGIANYAVYALI 309
            CGIA  A Y L+
Sbjct: 322 QCGIATNATYPLV 334


>gi|238816977|gb|ACR56863.1| cathepsin L-like cysteine proteinase [Delia coarctata]
          Length = 338

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 172/308 (55%), Gaps = 16/308 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++K+Y  +  +  +   +  N  KI  HNQ   QG   + L  N  +D+    + + M 
Sbjct: 33  EHRKNYLSEVEERFRMKIFNENRHKIAKHNQLYAQGKVSFKLGLNKYADMLHHEFKETMN 92

Query: 76  RLTHSRIRRTLVRSPE--------SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              H+ +R+ L R+ E        S  +V +P  +DWR+ G +T   +Q  CG+C++FS 
Sbjct: 93  GYNHT-MRKEL-RAQEGFNGITYISPANVQVPKAVDWRQHGAVTSVKDQGHCGSCWSFSS 150

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             +++GQ F+    +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 151 TGSLEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGVDTEKSYP 210

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+G    C F +  +    + +  +P  DE A+   +AT+GP+AV+I+AS  +FQLY+ G
Sbjct: 211 YEGIDDSCHFNKATVGATDTGFVDIPQGDEEAMMKAVATMGPVAVAIDASNESFQLYSEG 270

Query: 248 IYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           +Y+D  C+SD ++H +L+VGY      ++ W++KN W   WGD GY+ + R  +N+CGIA
Sbjct: 271 VYNDPNCSSDNLDHGVLVVGYGTDKDGQDYWLVKNSWGTTWGDQGYIKMARNQDNQCGIA 330

Query: 302 NYAVYALI 309
             + +  +
Sbjct: 331 TASSFPTV 338


>gi|392881548|gb|AFM89606.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 167/306 (54%), Gaps = 18/306 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT- 75
           + K Y +K  ++ +++ W+ + + I  HN E   G H + L  NH  D+    + + M  
Sbjct: 36  HGKSYEQK-EETWRRMVWEKHLRVIEIHNLEHSLGKHSFRLGMNHFGDMPNEEFRQLMNG 94

Query: 76  ---RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
              + TH +++ +    P   E   +P H+DWR++G++TP  +Q  CG+C+AFS   A++
Sbjct: 95  YKYKQTHKKLQGSHFLEPNFQE---VPKHVDWRDEGYVTPVKDQGQCGSCWAFSTTGALE 151

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F+ T ++  LS Q +V+CS   GN GC GG +     YV+  GG+  E+ YPY G  
Sbjct: 152 GQHFRRTGQLVSLSEQNLVECSKPEGNEGCNGGLMDQAFQYVKDNGGIDSEDSYPYVGTD 211

Query: 193 SI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C +       + + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY +
Sbjct: 212 DTPCHYNPQYNAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFE 271

Query: 252 EACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIAN 302
             C+S  ++H +L+VGY         +  WI+KN WS  WG NGY+ + K  +N CGIA 
Sbjct: 272 AECSSTDLDHGVLVVGYGVEKRDTDGKKYWIVKNSWSEKWGQNGYILMAKDKDNHCGIAT 331

Query: 303 YAVYAL 308
            A Y L
Sbjct: 332 AASYPL 337


>gi|2765358|emb|CAA74241.1| cathepsin L [Litopenaeus vannamei]
          Length = 325

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 154/282 (54%), Gaps = 8/282 (2%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           ++ N + I  HN   + G   +TL+ N   D+     +  M     +  RR        +
Sbjct: 46  FEQNQQFIDDHNARFENGEVTFTLQMNQFGDMTSEEIVATMNGFLGAPTRRPAAVLKADD 105

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
           E+  +P+ +DWR KG +TP  +Q+ CG+C+AFS   +++GQ F    ++  LS Q +VDC
Sbjct: 106 ET--LPEKVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDC 163

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S    N+GC GG +     Y++   G+  E+ YPY+ +   C+F   N+    + +  + 
Sbjct: 164 SDKFRNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQDGKCRFDASNVGATDTGYVDVE 223

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
              E ALK  +AT+GPI+V I+AS  TF  Y +G+Y D+ C+S  ++H +L VGY  +  
Sbjct: 224 HGSESALKKAVATIGPISVGIDASQSTFHFYHTGVYHDDHCSSTMLDHGVLAVGYGSDEN 283

Query: 273 ----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               W++KN W+  WGD GY+ + R  NN CGIA+ A Y L+
Sbjct: 284 GGDFWLVKNSWNTSWGDKGYIKMSRNRNNNCGIASQASYPLV 325


>gi|402770503|gb|AFQ98386.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 167/302 (55%), Gaps = 12/302 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y+    +  +   +  N   I  HN +  +GL  Y L  N   DL    + +    
Sbjct: 34  HKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFARIFN- 92

Query: 77  LTHSRIRRT----LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
             H   R+T     +     N+S L P  +DWR+KG +TP  +Q  CG+C+AFS   +++
Sbjct: 93  -GHHGTRKTGGSTFLPPANVNDSSL-PKVVDWRKKGAVTPVKDQGQCGSCWAFSATGSLE 150

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           G+ F    E+  LS Q +VDCS   GN GC GG + +   Y++   G+  E+ YPY+   
Sbjct: 151 GRHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKENDGIDTEKSYPYEAVD 210

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C+FK+ ++    + +  +    E  LK  +ATVGPI+V+I+AS  +FQLY+ G+YD+ 
Sbjct: 211 GECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEP 270

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYA 307
            C+S+ ++H +L+VGY     +  W++KN W+  WGD GY+ + R  NN+CGIA+ A Y 
Sbjct: 271 ECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQASYP 330

Query: 308 LI 309
           L+
Sbjct: 331 LV 332


>gi|124487918|gb|ABN12042.1| putative cathepsin L precursor [Maconellicoccus hirsutus]
          Length = 211

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/211 (44%), Positives = 137/211 (64%), Gaps = 7/211 (3%)

Query: 106 EKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGG 165
           +KG +T   +Q DCG+CYAFS   +I+GQ F+ +  ++ LS QQ++DCS+  GN GC GG
Sbjct: 1   KKGAVTEVKDQGDCGSCYAFSTTGSIEGQQFRKSGTLKSLSEQQIIDCSVKYGNGGCEGG 60

Query: 166 SLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLA 225
            + N  NYV   GG+  E  YPY  +++ C +K  N   +I  ++ LP  DE  LK+ +A
Sbjct: 61  VMENAFNYVIDNGGIDSEGSYPYIDRETQCAYKPENSAANIKDFATLPVGDEEMLKLAVA 120

Query: 226 TVGPIAVSINASPHTFQLYASGIYDDEACTS--DYVNHAMLLVGY----TRNSWILKNWW 279
            VGPI+++IN SP +F+LY SG+Y D+ C S  D + HA+L+VGY     ++ W++KN W
Sbjct: 121 KVGPISIAINTSPRSFKLYKSGVYYDKDCKSDPDDLTHAVLVVGYGTEDGKDYWLVKNSW 180

Query: 280 SHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           +  WG+NGY+ + R  NN CGIA+YA Y  +
Sbjct: 181 NTDWGENGYIKMARNKNNHCGIASYATYPTV 211


>gi|148709374|gb|EDL41320.1| cathepsin 7, isoform CRA_c [Mus musculus]
          Length = 277

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/221 (43%), Positives = 136/221 (61%), Gaps = 10/221 (4%)

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
           IP  LDWR++G++TP   Q  CGAC+AFS+ + I+GQ+FK T ++  LS+Q ++DCS+  
Sbjct: 58  IPPTLDWRKEGYVTPVRRQGSCGACWAFSVTACIEGQLFKKTGKLIPLSVQNLMDCSVSY 117

Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
           G  GC GG   +   YV+  GGL  E  YPY+ K   C+++    VV ++ + V+ P++E
Sbjct: 118 GTKGCDGGRPYDAFQYVKNNGGLEAEATYPYEAKAKHCRYRPERSVVKVNRFFVV-PRNE 176

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--------T 269
            AL   L T GPIAV+I+ S  +F  Y  GIY +  C  D ++H +LLVGY         
Sbjct: 177 EALLQALVTHGPIAVAIDGSHASFHSYRGGIYHEPKCRKDTLDHGLLLVGYGYEGHESEN 236

Query: 270 RNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           R  W+LKN     WG+NGYM L RG NN CGIA+YA+Y  +
Sbjct: 237 RKYWLLKNSHGERWGENGYMKLPRGQNNYCGIASYAMYPAL 277


>gi|449681105|ref|XP_002158608.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 339

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 174/307 (56%), Gaps = 17/307 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y+    ++   L+W++N K++  HN +     H +    N  SD+    + K 
Sbjct: 39  KAKFGKTYKSNIEEAPSYLNWKNNLKEVERHNSKK----HSFKKGINQFSDMSHEEFRKM 94

Query: 74  MT---RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
                +L+   + +  +    SN  V+IPD +DWR +G++T   NQ  CG+C+AFS   A
Sbjct: 95  YGGCFKLSKKNVTKGSIFLSPSN--VVIPDSVDWRTEGYVTRVKNQGQCGSCWAFSSTGA 152

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ F+ T  ++E+S Q +VDC+   GN  C GG + N   Y++   G+  E  YPY  
Sbjct: 153 LEGQTFRKTGVLQEISEQNLVDCTQSYGNEACNGGWMDNAFTYIKDNKGIDSEVGYPYYA 212

Query: 191 KQ-SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           +    C + +   V   + +  +P  DE+ALKV +ATVGPI+V+I+A+  +F  Y SG+Y
Sbjct: 213 RALGYCYYNQQYNVASDTGFVDIPSGDENALKVAVATVGPISVAIDATKASFMSYQSGVY 272

Query: 250 DDEACTS--DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           ++  C +  + ++HA+L+VGY     R+ WI+KN W   WGD GY+ + R  +N+CGIA 
Sbjct: 273 NEPTCGNGIENLDHAVLVVGYGTEEGRDFWIVKNSWDTTWGDQGYIKMSRNMSNQCGIAT 332

Query: 303 YAVYALI 309
            A Y ++
Sbjct: 333 KASYPIV 339


>gi|359385048|emb|CBY80149.1| silicatein yellow variant [Tethya aurantium]
          Length = 332

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 163/303 (53%), Gaps = 16/303 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K Y+ +  + +K L W SN K I  HN  A     G++L  NHL D+    Y ++
Sbjct: 33  KNQHSKSYQTELEELEKHLVWLSNKKYIELHNANAD--TFGFSLAMNHLGDMTDYEYQEK 90

Query: 74  MTRLTHSRIR-----RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
                +S  +     +   R P   +    P+ +DWR KG +T   NQ DCGA YAFS  
Sbjct: 91  YLTYQNSNSKSGNYTKVFQREPWMTD----PETVDWRTKGAVTNIKNQGDCGASYAFSAM 146

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++G    +T ++  LS Q ++DCS+  GN GC GG++     YV    G+  E  YPY
Sbjct: 147 GALEGASALATGKLIPLSEQNIIDCSVPYGNHGCKGGNMYIAFKYVIANDGVDSETSYPY 206

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            GKQS C +K  N V  +S    +    E  L+  +A  GP+AV+I+ S + F+ Y SG+
Sbjct: 207 GGKQSSCTYKTQNSVASMSGSIQIKYGSETDLEAAVANNGPVAVAIDGSSNAFRFYFSGV 266

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANY 303
           YD   C+S Y+NHAM++ GY     +  W+ KN W  +WG+ GY+ + R   N+CGIA+ 
Sbjct: 267 YDSSRCSSSYLNHAMVITGYGISGDQEYWLAKNSWGTNWGEEGYVKMARNKYNQCGIASD 326

Query: 304 AVY 306
           A +
Sbjct: 327 ASF 329


>gi|33112583|gb|AAP94047.1| cathepsin-L-like cysteine peptidase 03 [Tenebrio molitor]
          Length = 337

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 179/323 (55%), Gaps = 21/323 (6%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  ++W    +   K+Y+ D  ++    + K+  +++H  +  HN+   QGL  + L  N
Sbjct: 22  LVQEQWGAFKMTHNKQYQSDTEERF---RMKIFMENSHT-VAKHNKLYAQGLVSFKLGIN 77

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITP 112
             +D+    +++ +     ++   + +RS ES++SV         +P  +DWR+KG +TP
Sbjct: 78  KYADMLHHEFVQVLNGFNRTK---SGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAVTP 134

Query: 113 DWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLN 172
             +Q  CG+C++FS   +++GQ F+ + ++  LS Q +VDCS   GN GC GG + N   
Sbjct: 135 VKDQGQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFR 194

Query: 173 YVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAV 232
           Y++  GG+  E+ YPYK +   C +K  N       +  +   +E  L+  +ATVGP++V
Sbjct: 195 YIKANGGIDTEQAYPYKAEDEKCHYKPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSV 254

Query: 233 SINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNG 287
           +I+AS  +FQLY+ G+Y +  C++  ++H +L+VGY         W++KN W   WGD G
Sbjct: 255 AIDASHQSFQLYSGGVYYEPDCSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQG 314

Query: 288 YMYLKRG-NNRCGIANYAVYALI 309
           Y+ + R  +N CGIA  A Y L+
Sbjct: 315 YIKMARNRDNNCGIATEASYPLV 337


>gi|118429523|gb|ABK91809.1| cathepsin L-like proteinase precursor [Clonorchis sinensis]
          Length = 373

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/307 (37%), Positives = 167/307 (54%), Gaps = 20/307 (6%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           YK++Y   +   ++   + +N  +I  HN    QG   YT+  N  SD       +E+ R
Sbjct: 73  YKRNYIDPSEHERRFKIFANNFVRISKHNVRFIQGQVSYTMGINEFSD----KTDEELKR 128

Query: 77  LTHSRIRRTLVRSPESNESVLI----PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           L     R +L  S + ++ + I    P  +DWR KG +TP  NQ +CG+C+AFS   AI+
Sbjct: 129 LRC--FRGSLNASRDGSKYITIAAPPPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGAIE 186

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F +T  +  LS QQ+VDCS   GN  C GG + N   YV+ + G+  E  YPY   +
Sbjct: 187 GQNFLATGNLVSLSEQQLVDCSSEYGNNACNGGLMDNAFKYVKDSNGIDTEASYPYVSGE 246

Query: 193 S-----ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           +      C+F     VV ++ +  LP      LK  +   GPI+V+INA   +F  Y SG
Sbjct: 247 TGDANPTCRFNLKEAVVRVTGYIDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSG 306

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           +Y D+ C+SD ++H +LLVGY   +    W++KN W  HWG+NGY+ + R  NN CG+A+
Sbjct: 307 VYSDDQCSSDDLDHGVLLVGYGEENGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVAS 366

Query: 303 YAVYALI 309
            A Y LI
Sbjct: 367 MASYPLI 373


>gi|30023547|gb|AAO48766.2| cathepsin L-like cysteine proteinase [Tenebrio molitor]
          Length = 337

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 179/323 (55%), Gaps = 21/323 (6%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  ++W    +   K+Y+ +  ++    + K+  +++H  +  HN+   QGL  + L  N
Sbjct: 22  LVQEQWGAFKMTHNKQYQSETEERF---RMKIFMENSHT-VAKHNKLYAQGLVSFKLGIN 77

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITP 112
             +D+    +++ +     ++   + +RS ES++SV         +P  +DWR+KG +TP
Sbjct: 78  KYADMLHHEFVQVLNGFNRTK---SGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAVTP 134

Query: 113 DWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLN 172
             +Q  CG+C++FS   +++GQ F+ + ++  LS Q +VDCS   GN GC GG + N   
Sbjct: 135 VKDQGQCGSCWSFSATGSLEGQHFRQSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFR 194

Query: 173 YVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAV 232
           Y++  GG+  E+ YPYK +   C +K  N       +  +   +E  L+  +ATVGP++V
Sbjct: 195 YIKANGGIDTEQAYPYKAEDEKCHYKPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSV 254

Query: 233 SINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNG 287
           +I+AS  +FQLY+ G+Y +  C++  ++H +L+VGY         W++KN W   WGD G
Sbjct: 255 AIDASHQSFQLYSGGVYYEPDCSASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQG 314

Query: 288 YMYLKRG-NNRCGIANYAVYALI 309
           Y+ + R  NN CGIA  A Y L+
Sbjct: 315 YIKMARNRNNNCGIATEASYPLV 337


>gi|395535909|ref|XP_003769963.1| PREDICTED: cathepsin S [Sarcophilus harrisii]
          Length = 347

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/305 (36%), Positives = 163/305 (53%), Gaps = 13/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y ++  +  ++L W+ N K +  HN E   GLH Y L  NHLSD+        
Sbjct: 47  KKTYGKQYEEQNQEVTRRLIWEKNLKFVTLHNLEHSMGLHSYDLSMNHLSDMTSEEVASL 106

Query: 74  MT--RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           M+  R+ +   R T  R    N +  +PD +DWR+KG +T    Q  CG+C+AFS   A+
Sbjct: 107 MSSLRIPNQWSRNTTYRL---NSNQKLPDSVDWRDKGCVTEVKYQGTCGSCWAFSAVGAL 163

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISG--NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           + Q+   T ++  LS Q +VDCS      N GC GG +     Y+    G+  +  YPYK
Sbjct: 164 EAQLKLKTGKLVSLSAQNLVDCSTNEKYENHGCNGGCMTEAFQYIIDNNGIDSDASYPYK 223

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            K   C++   N     S ++ LP   E ALK  +A  GP++V I+AS  +F LY SG+Y
Sbjct: 224 AKDGKCQYNPANRAATCSRYTELPYGSEDALKEAVANKGPVSVGIDASLPSFFLYKSGVY 283

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            D +CT + VNH +L+ GY     ++ W++KN W   +GD GY+ + R   N CGIAN+ 
Sbjct: 284 YDPSCTQN-VNHGVLVTGYGNLDGKDYWLVKNSWGLSFGDKGYIRIARNRGNHCGIANFP 342

Query: 305 VYALI 309
            Y  I
Sbjct: 343 SYPEI 347


>gi|226477902|emb|CAX72658.1| Cathepsin L precursor [Schistosoma japonicum]
 gi|226488903|emb|CAX74801.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/309 (35%), Positives = 169/309 (54%), Gaps = 11/309 (3%)

Query: 12  FPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           F +  +K+ Y     ++K+ L + +N  K+  HN+  Q+G   Y +  N+ +D       
Sbjct: 64  FFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTDKTEYELR 123

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           K     +  RI +    +  S+E   +PD +DWR  G +TP  NQ  CG+C+AFS   AI
Sbjct: 124 KLRGYRSACRIAKPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQGQCGSCWAFSSTGAI 183

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY--- 188
           +GQ ++ T+ +  LS QQ++DCS   GN GC GG +     YV+   G+  E  YPY   
Sbjct: 184 EGQHYRKTNRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRDNEGIDSEISYPYISG 243

Query: 189 KGKQSI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
            G +++ C F   NI+  ++ +  +   DE AL   +AT+GP++V+INA   +F +Y SG
Sbjct: 244 DGDENVRCLFNSTNIMAQVTGYINIHEGDERALMNAVATIGPVSVAINAGLSSFSMYKSG 303

Query: 248 IYDDEAC--TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGI 300
           IY D  C   S+ ++H +LLVGY     +  W++KN W   WGD GY+  LK   N CG+
Sbjct: 304 IYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCGV 363

Query: 301 ANYAVYALI 309
           A+ A Y L+
Sbjct: 364 ASAASYPLV 372


>gi|221117518|ref|XP_002157675.1| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 340

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/320 (36%), Positives = 173/320 (54%), Gaps = 19/320 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           M + EW    I    K+ K Y     ++ K L+W+ N++KI  HN E +     + +  N
Sbjct: 29  MKDPEWRRFKI----KFGKFYSSNIEETSKYLNWKINNEKIKNHNSENRF----FKIGMN 80

Query: 61  HLSDLHPRHYIK---EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQE 117
             SDL    +IK      +L  S I  T   +     +V IPD +DWR KG++ P  NQ 
Sbjct: 81  QFSDLTHEEFIKIYGGCFKLPKSFINITKGSTFLPPSNVNIPDEVDWRTKGYVNPVKNQG 140

Query: 118 DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177
            CG+C+AFS   A++GQ F+ T  + +LS Q +VDC+   GN  C GG + N   Y+   
Sbjct: 141 QCGSCWAFSTTGALEGQTFRKTGVLPDLSEQNLVDCTQSYGNEACNGGWMDNAFKYISDN 200

Query: 178 GGLMKEEDYPYKGKQ-SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINA 236
            G+  E  YPY  K    C + +   V   + +  +   DE ALKV +ATVGPI+V+I+A
Sbjct: 201 KGIDSEAGYPYYAKALGYCYYNQQFNVASDTGFVDIASGDEDALKVAVATVGPISVAIDA 260

Query: 237 SPHTFQLYASGIYDDEACTS--DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMY 290
           +  +F  Y SG+Y +  C +  + ++HA+L+VGY     R+ W++KN W   WGD GY+ 
Sbjct: 261 TKDSFMRYQSGVYYEPTCGNGLENLDHAVLVVGYGTEDGRDFWLVKNSWDITWGDQGYIK 320

Query: 291 LKRG-NNRCGIANYAVYALI 309
           + R  +N+CGIA  A Y L+
Sbjct: 321 MSRNMSNQCGIATKASYPLV 340


>gi|61368403|gb|AAX43172.1| cathepsin S [synthetic construct]
          Length = 332

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +    +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNITY--KSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP++V ++A   +F LY SG+Y +
Sbjct: 210 DQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W H++G+ GY+ + R   N CGIA++  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|56758090|gb|AAW27185.1| SJCHGC06231 protein [Schistosoma japonicum]
          Length = 372

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/309 (35%), Positives = 169/309 (54%), Gaps = 11/309 (3%)

Query: 12  FPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           F +  +K+ Y     ++K+ L + +N  K+  HN+  Q+G   Y +  N+ +D       
Sbjct: 64  FFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTDKTEYELR 123

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           K     +  RI +    +  S+E   +PD +DWR  G +TP  NQ  CG+C+AFS   AI
Sbjct: 124 KLRGYRSACRIAKPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQGQCGSCWAFSSTGAI 183

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY--- 188
           +GQ ++ T+ +  LS QQ++DCS   GN GC GG +     YV+   G+  E  YPY   
Sbjct: 184 EGQHYRKTNRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRDNKGIDSEISYPYISG 243

Query: 189 KGKQSI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
            G +++ C F   NI+  ++ +  +   DE AL   +AT+GP++V+INA   +F +Y SG
Sbjct: 244 DGDENVRCLFNSTNIMAQVTGYINIHEGDERALMNAVATIGPVSVAINAGLPSFSMYKSG 303

Query: 248 IYDDEAC--TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGI 300
           IY D  C   S+ ++H +LLVGY     +  W++KN W   WGD GY+  LK   N CG+
Sbjct: 304 IYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCGV 363

Query: 301 ANYAVYALI 309
           A+ A Y L+
Sbjct: 364 ASAASYPLV 372


>gi|449491897|ref|XP_002194340.2| PREDICTED: cathepsin L1-like [Taeniopygia guttata]
          Length = 304

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/302 (36%), Positives = 171/302 (56%), Gaps = 19/302 (6%)

Query: 24  KATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIR 83
           +  ++ ++  W+ N ++I  HN+E +QG H Y L  N   DL  + + + M   T   + 
Sbjct: 4   QEAEALRRQVWEQNLRRIQQHNREERQGKHSYRLAMNRFGDLTNQEFNELMNGYTP--VP 61

Query: 84  RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIE 143
           R      +++ ++  P  +DWR KG++TP   Q DCG+C+AFS   A++G  F+ T ++ 
Sbjct: 62  REEPAEFQTSAALESPMKVDWRAKGYVTPVKFQGDCGSCWAFSATGALEGLTFRQTGKLV 121

Query: 144 ELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK-QSICKFKRPNI 202
            LS Q ++DC+   GN+GC GGS++    YV+  GGL  E  YPY G   S C+++    
Sbjct: 122 ALSEQNLIDCTKNLGNMGCRGGSMQRAFQYVRDNGGLSSERAYPYTGTDNSPCRYEPSYK 181

Query: 203 VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG-IYDDEAC--TSDY- 258
             + S +  +P   E AL   +A VGP++V+++AS +TF+ Y+SG ++    C  T  Y 
Sbjct: 182 AANCSGFRTVPRGSEAALAQAVAAVGPVSVAVDASSYTFRFYSSGTVHSSSPCIFTCPYG 241

Query: 259 ---VNHAMLLVG--------YTRNSWILKNWWSHHWGDNGYMY-LKRGNNRCGIANYAVY 306
              +NHAMLLVG        Y+ N WILKN WS  WG  GYM+ LK  +N+CG+A+   Y
Sbjct: 242 QQQLNHAMLLVGYNTAHLGNYSVNYWILKNSWSEGWGQKGYMFLLKNAHNQCGVASDGSY 301

Query: 307 AL 308
            +
Sbjct: 302 PV 303


>gi|324512246|gb|ADY45078.1| Cathepsin L [Ascaris suum]
          Length = 388

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 168/305 (55%), Gaps = 12/305 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           ++++ K+Y  + T++   L + SN ++I  HN   Q+G   + +  NH++DL    Y K 
Sbjct: 87  KEQHGKNYEDEETENDHMLAFLSNLEEIRKHNARYQRGESSFEMGTNHITDLPFEEYRKL 146

Query: 73  --EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
                R   S    T    P +   + +P H DWR+ G++T   NQ  CG+C+AFS   A
Sbjct: 147 NGYKPRYDDSHRNGTKFLVPFN---INVPGHWDWRDHGYVTEVKNQGMCGSCWAFSATGA 203

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ  +    +  LS Q +VDCS   GN GC GG +     Y++   G+  E  YPYKG
Sbjct: 204 LEGQHKRKIGSLVSLSEQNLVDCSRKYGNNGCNGGLMDYAFEYIKDNHGVDTEASYPYKG 263

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           K+  C F +  +  +   +  LP  DE  LK+ +AT GPI+V+I+A   +FQ+Y  G+Y 
Sbjct: 264 KEMKCHFNKKTVGAEDEGYVDLPEGDEEKLKIAVATQGPISVAIDAGHPSFQMYRKGVYY 323

Query: 251 DEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           +  C+S+ ++H +L+VGY  +      WI+KN W   WG+ GY+ + R  +N CGIA+ A
Sbjct: 324 EPQCSSESLDHGVLVVGYGTDEIDGDYWIVKNSWGPGWGEKGYVRIARNRDNHCGIASKA 383

Query: 305 VYALI 309
            Y ++
Sbjct: 384 SYPIV 388


>gi|23110962|ref|NP_004070.3| cathepsin S isoform 1 preproprotein [Homo sapiens]
 gi|88984046|sp|P25774.3|CATS_HUMAN RecName: Full=Cathepsin S; Flags: Precursor
 gi|60816153|gb|AAX36372.1| cathepsin S [synthetic construct]
 gi|61358282|gb|AAX41541.1| cathepsin S [synthetic construct]
 gi|119573903|gb|EAW53518.1| cathepsin S, isoform CRA_b [Homo sapiens]
 gi|119573904|gb|EAW53519.1| cathepsin S, isoform CRA_b [Homo sapiens]
          Length = 331

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +    +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNITY--KSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP++V ++A   +F LY SG+Y +
Sbjct: 210 DQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W H++G+ GY+ + R   N CGIA++  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|392884266|gb|AFM90965.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 167/306 (54%), Gaps = 18/306 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT- 75
           + K Y +K  ++ +++ W+ + + I  HN E   G H + L  NH  D+    + + M  
Sbjct: 36  HGKSYEQK-EETWRRMVWEEHLRVIEIHNLEHSLGKHSFRLGMNHFGDMPNEEFRQLMNG 94

Query: 76  ---RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
              + TH +++ +    P   E   +P H+DWR++G++TP  +Q  CG+C+AFS   A++
Sbjct: 95  YKYKQTHKKLQGSHFLEPNFLE---VPKHVDWRDEGYVTPVKDQGQCGSCWAFSTTGALE 151

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F+ T ++  LS Q +V+CS   GN GC GG +     YV+  GG+  E+ YPY G  
Sbjct: 152 GQHFRRTGQLVSLSEQNLVECSKPEGNEGCNGGLMDQAFQYVKDNGGIDSEDSYPYVGTD 211

Query: 193 SI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C +       + + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY +
Sbjct: 212 DTPCHYNPQYNAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFE 271

Query: 252 EACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIAN 302
             C+S  ++H +L+VGY         +  WI+KN WS  WG NGY+ + K  +N CGIA 
Sbjct: 272 AECSSTDLDHGVLVVGYGVEKRDTDGKKYWIVKNSWSEKWGQNGYILMAKDKDNHCGIAT 331

Query: 303 YAVYAL 308
            A Y L
Sbjct: 332 AASYPL 337


>gi|33112581|gb|AAP94046.1| cathepsin-L-like cysteine peptidase 02 [Tenebrio molitor]
          Length = 337

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 178/323 (55%), Gaps = 21/323 (6%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  ++W    +   K+Y+ D  ++    + K+  +++H  +  HN+   QGL  + L  N
Sbjct: 22  LVQEQWGAFKMTHNKQYQSDTEERF---RMKIFMENSHT-VAKHNKLYAQGLVSFKLGIN 77

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITP 112
             +D+    +++ +     ++   + +RS ES++SV         +P  +DWR+KG +TP
Sbjct: 78  KYADMLHHEFVQVLNGFNRTK---SGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAVTP 134

Query: 113 DWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLN 172
             +Q  CG+C++FS   +++GQ F+ + ++  LS Q +VDCS   GN GC GG + N   
Sbjct: 135 VKDQGQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDCSEKFGNNGCNGGLMDNAFR 194

Query: 173 YVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAV 232
           Y++  GG+  E+ YPYK +   C +K  N       +  +   +E  L+  +ATVGP++V
Sbjct: 195 YIKANGGIDTEQAYPYKAEDEKCHYKPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSV 254

Query: 233 SINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNG 287
           +I+AS  +FQLY+ G+Y +  C+   ++H +L+VGY         W++KN W   WGD G
Sbjct: 255 AIDASHQSFQLYSGGVYYEPECSPSQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQG 314

Query: 288 YMYLKRG-NNRCGIANYAVYALI 309
           Y+ + R  +N CGIA  A Y L+
Sbjct: 315 YIKMARNRDNNCGIATEASYPLV 337


>gi|290462225|gb|ADD24160.1| Cathepsin L [Lepeophtheirus salmonis]
          Length = 334

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 168/300 (56%), Gaps = 8/300 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           ++K Y     +  +   +  N  +I  HN EA QG H Y ++ NH  DL    ++  +  
Sbjct: 36  HQKGYDSSVEEKLRLKIFMENSLRISRHNAEAIQGRHTYFMKMNHYGDLLHHEFVAMVNG 95

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
             ++  + TL  +   ++++ +P+H+DWRE+G +TP  NQ  CG+C++FS   +++GQ F
Sbjct: 96  YIYNN-KTTLGGTFIPSKNINLPEHVDWREEGAVTPVKNQGQCGSCWSFSATGSLEGQDF 154

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           + T ++  LS Q +VDCS   GN GC GG +     Y+Q   G+  E  YPY+G    C 
Sbjct: 155 RKTGKLISLSEQNLVDCSRKYGNNGCEGGLMDYAFKYIQDNNGIDTEASYPYEGIDGHCH 214

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +   N       +  +    E  L+  LATVGPI+V+I+AS  +FQ Y+ G+Y ++ C+ 
Sbjct: 215 YDPKNKGGSDIGFVDIKKGSEKDLQKALATVGPISVAIDASHMSFQFYSHGVYSEKKCSP 274

Query: 257 DYVNHAMLLVGYTRNS------WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           + ++H +L VGY  +       W++KN WS  WG++GY+ + R  +N CGIA+ A Y ++
Sbjct: 275 ENLDHGVLAVGYGTDEVTGEDYWLVKNSWSEKWGEDGYIKMARNKDNMCGIASSASYPVV 334


>gi|395844675|ref|XP_003795081.1| PREDICTED: cathepsin L1-like [Otolemur garnettii]
          Length = 333

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 161/290 (55%), Gaps = 14/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVR 88
           ++  W+ N K I  HN E  QG +G+T+  N   D+    + + M    + + ++  + R
Sbjct: 48  RRAVWEKNMKMIELHNGEYSQGKYGFTMAMNAFGDMTNEEFRQVMNGFQNRKHKKGKMFR 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P   +    P  +DWR+KG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLFFKP---PKSVDWRKKGYVTPVKNQGQCGSCWAFSSTGALEGQMFRKTGKLISLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            +VDCS   GN GC+GG +    NYV+  GGL  E  YPY  +   CK+K    V + + 
Sbjct: 165 NLVDCSQRQGNHGCSGGLMNFAFNYVKENGGLDSEVSYPYVARDEKCKYKPEYSVANDTG 224

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           +  +P Q E AL   +A +GPI+++I+AS  + Q Y SGIY +  C+S  ++H +LL+GY
Sbjct: 225 FVNIPTQ-EKALMKAVAIIGPISIAIDASHISIQFYKSGIYYEPNCSSKNLDHGVLLIGY 283

Query: 269 TRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                       W +KN W   WG +G + + K  NN CGIA+ A Y  +
Sbjct: 284 GFEGTDSDDNKFWFIKNSWGIEWGLDGCIKIAKDKNNHCGIASAASYPTV 333


>gi|402856105|ref|XP_003892640.1| PREDICTED: cathepsin S isoform 1 [Papio anubis]
          Length = 331

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +    +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNITY--KSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKAT 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP++V ++AS  +F LY SG+Y +
Sbjct: 210 DQKCQYDSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W  ++G+ GY+ + R   N CGIA++  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGVLNGKEYWLVKNSWGRNFGEEGYIRMARNKGNHCGIASFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|346574375|gb|AEO36959.1| silicatein-alpha 2 [Baikalospongia fungiformis]
          Length = 316

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 165/306 (53%), Gaps = 17/306 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  Y K Y  +  + ++   W SN K I  HN  A   + GY+L  NH  D+    +  +
Sbjct: 18  KGSYGKSYASELEELERHSVWLSNRKYIEEHN--AHSDVFGYSLAMNHFGDMSEVEF--K 73

Query: 74  MTRLTHSRIRRT-----LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
              LTH     T       ++P+  + V +   +DWR KG +T   NQ DCGA YAF+  
Sbjct: 74  DVFLTHEPGNYTSRGIATFKAPQGMKYVYL---IDWRTKGAVTSVKNQGDCGASYAFAAT 130

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
             ++G    S  +   LS Q ++DCS+  GN GC+GG     + YV   GG+  E  Y  
Sbjct: 131 GTMEGANALSNDKQVSLSEQNIIDCSVPYGNHGCSGGDTYTAIKYVVDNGGIDTESSYSL 190

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +GKQS C++   N     +    +P   E  L   +ATVGP+AV+++A+ + F+ Y SG+
Sbjct: 191 RGKQSSCQYNSNNSGASATGAVGIPYGSESDLMAAVATVGPVAVAVDANTNAFRFYQSGV 250

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANY 303
           +D   C+S  +NHAML+ GY     ++ W++KN W  +WGDNGY+ + R   N+CGIA+ 
Sbjct: 251 FDSSTCSSTKLNHAMLVTGYGSYNGKDYWLVKNSWGKYWGDNGYIMMVRNKYNQCGIASD 310

Query: 304 AVYALI 309
           A+Y+++
Sbjct: 311 ALYSML 316


>gi|114559418|ref|XP_001171268.1| PREDICTED: cathepsin S isoform 3 [Pan troglodytes]
 gi|397492866|ref|XP_003817341.1| PREDICTED: cathepsin S isoform 1 [Pan paniscus]
 gi|410225070|gb|JAA09754.1| cathepsin S [Pan troglodytes]
 gi|410251608|gb|JAA13771.1| cathepsin S [Pan troglodytes]
 gi|410328325|gb|JAA33109.1| cathepsin S [Pan troglodytes]
 gi|410328327|gb|JAA33110.1| cathepsin S [Pan troglodytes]
          Length = 331

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +    +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNITY--KSNPNQILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAT 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP++V ++A   +F LY SG+Y +
Sbjct: 210 DQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDALHPSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W H++G+ GY+ + R   N CGIA++  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|387914010|gb|AFK10614.1| cathepsin L [Callorhinchus milii]
 gi|392873762|gb|AFM85713.1| cathepsin L [Callorhinchus milii]
 gi|392877488|gb|AFM87576.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 167/306 (54%), Gaps = 18/306 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT- 75
           + K Y +K  ++ +++ W+ + + I  HN E   G H + L  NH  D+    + + M  
Sbjct: 36  HGKSYEQK-EETWRRMVWEKHLRVIEIHNLEHSLGKHSFRLGMNHFGDMPNEEFRQLMNG 94

Query: 76  ---RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
              + TH +++ +    P   E   +P H+DWR++G++TP  +Q  CG+C+AFS   A++
Sbjct: 95  YKYKQTHKKLQGSHFLEPNFLE---VPKHVDWRDEGYVTPVKDQGQCGSCWAFSTTGALE 151

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F+ T ++  LS Q +V+CS   GN GC GG +     YV+  GG+  E+ YPY G  
Sbjct: 152 GQHFRRTGQLVSLSEQNLVECSKPEGNEGCNGGLMDQAFQYVKDNGGIDSEDSYPYVGTD 211

Query: 193 SI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C +       + + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY +
Sbjct: 212 DTPCHYNPQYNAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFE 271

Query: 252 EACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIAN 302
             C+S  ++H +L+VGY         +  WI+KN WS  WG NGY+ + K  +N CGIA 
Sbjct: 272 AECSSTDLDHGVLVVGYGVEKRDTDGKKYWIVKNSWSEKWGQNGYILMAKDKDNHCGIAT 331

Query: 303 YAVYAL 308
            A Y L
Sbjct: 332 AASYPL 337


>gi|194741252|ref|XP_001953103.1| GF17600 [Drosophila ananassae]
 gi|190626162|gb|EDV41686.1| GF17600 [Drosophila ananassae]
          Length = 333

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/315 (34%), Positives = 171/315 (54%), Gaps = 18/315 (5%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW+      + +Y K Y+ +  +  +   +  N   I  HN +   G   + L  N  +
Sbjct: 28  EEWMAF----KLEYNKVYQDETEEQLRFKIFNYNKLLIARHNLKWAAGKVSFNLAVNKFA 83

Query: 64  DLHPRHYIKEM---TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCG 120
           DL    +   M      + S    +    P +   + +PD +DWR+ GF+TP  +Q  CG
Sbjct: 84  DLLDHEFQDLMLGKMSPSGSNFGSSTFLPPVN---LTLPDAVDWRKYGFVTPVKDQGSCG 140

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+AFS   +++GQ F+ T ++  LS Q ++DCS   GN GC  G++     Y+Q   G+
Sbjct: 141 SCWAFSTTGSLEGQHFRKTGQLISLSEQNLIDCS--PGNNGCKNGAVEYAFRYIQSNKGI 198

Query: 181 MKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
             E  YPY+  Q+ C+F+R  I    + +  L P DE  L   +ATVGPI+V IN+S  +
Sbjct: 199 DTEISYPYEAAQNQCRFRRDTIGATSTGFVKLNPGDEMELAQAVATVGPISVLINSSLDS 258

Query: 241 FQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKR-G 294
           F+ Y  G+Y+D +C  + + HA+L+VGY  +      W++KN WS HWG+ GY+ +KR  
Sbjct: 259 FKFYHDGVYNDPSCNPNKLTHAVLVVGYGTDDRGGDFWLVKNSWSTHWGEQGYVKIKRNA 318

Query: 295 NNRCGIANYAVYALI 309
           NN CGIA+ A+Y L+
Sbjct: 319 NNLCGIASNALYPLV 333


>gi|355558399|gb|EHH15179.1| hypothetical protein EGK_01236 [Macaca mulatta]
 gi|380809986|gb|AFE76868.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416071|gb|AFH31249.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416073|gb|AFH31250.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416075|gb|AFH31251.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416077|gb|AFH31252.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416079|gb|AFH31253.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
          Length = 331

 Score =  194 bits (493), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 168/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +  + +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNI--TYKSNANQILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKAT 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP++V ++AS  +F LY SG+Y +
Sbjct: 210 DQKCQYDSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W  ++G+ GY+ + R   N CGIA++  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGVLNGKEYWLVKNSWGRNFGEEGYIRMARNKGNHCGIASFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|332220183|ref|XP_003259237.1| PREDICTED: cathepsin S isoform 1 [Nomascus leucogenys]
          Length = 331

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +    +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNITY--KSNPNQILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP++V ++AS  +F LY SG+Y +
Sbjct: 210 DQKCQYDSKYRAATCSKYTELPYSREDVLKEAVANKGPVSVGVDASHPSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W  ++G+ GY+ + R   N CGIA++  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGDLNGKEYWLVKNSWGRNFGEEGYIRMARNKGNHCGIASFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|355763133|gb|EHH62119.1| hypothetical protein EGM_20318 [Macaca fascicularis]
          Length = 331

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 168/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +  + +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNI--TYKSNANQILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTRAFQYIIDNNGIDSDASYPYKAT 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP++V ++AS  +F LY SG+Y +
Sbjct: 210 DQKCQYDSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W  ++G+ GY+ + R   N CGIA++  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGVLNGKEYWLVKNSWGRNFGEEGYIRMARNKGNHCGIASFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|37994576|gb|AAH60335.1| Unknown (protein for MGC:68554) [Xenopus laevis]
          Length = 335

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/306 (36%), Positives = 168/306 (54%), Gaps = 18/306 (5%)

Query: 19  KDYRKKATDSK----KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           KD+ KK    K    +++ W+ N K I  HN +   G H Y L  N   D+    + + M
Sbjct: 33  KDWHKKTYAPKEEGWRRVLWEKNLKMIEFHNLDHSLGKHSYRLGMNQFGDMTNEEFKQLM 92

Query: 75  TRLTHSR-IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
               + + IR +   +P + E+   P  +DWR+KG++TP  +Q  CG+C+AFS   A++G
Sbjct: 93  NGYKNQKMIRGSTFLAPNNFEA---PKSVDWRKKGYVTPVKDQGQCGSCWAFSTTGALEG 149

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q ++ TS++  LS Q +VDCS   GN GC GG +     YV+  GG+  E+ YPY  K  
Sbjct: 150 QHYRKTSKLISLSEQNLVDCSRAQGNEGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDD 209

Query: 194 I-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C +   N   + + +  +    E  L   +A+VGP++V+I+A   +FQ Y SGIY + 
Sbjct: 210 QECHYDPNNNSANDTGFVDVQSGCEKDLMKAVASVGPVSVAIDAGHQSFQFYQSGIYYEP 269

Query: 253 ACTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIANY 303
            C+S+ ++H +L+VGY   S        WI+KN WS  WGDNGY+ + K  +N CGIA  
Sbjct: 270 ECSSEDLDHGVLVVGYGFESEDVDGKKYWIVKNSWSEKWGDNGYINIAKDRHNHCGIATA 329

Query: 304 AVYALI 309
           A Y L+
Sbjct: 330 ASYPLV 335


>gi|86285730|gb|ABC94586.1| silicatein alpha [Hymeniacidon perlevis]
          Length = 331

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 162/303 (53%), Gaps = 9/303 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K Y  K  + ++ L W SN K I  HN  A   + G+TL  N   D+    +   
Sbjct: 31  KSRHSKIYESKLVELERHLTWVSNKKYIEQHN--ANSHIFGFTLAMNKFGDMSELEWANF 88

Query: 74  MTRLTHSRIRRTLVRSPESNESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           ++  +  + +    ++ + +  V   P+ +DWR KG +T   +Q DCGA YAFS   A++
Sbjct: 89  LSYBSDGKSKGNYTKTFQPDPRVHDYPEAIDWRTKGAVTAVKDQGDCGASYAFSAMGALE 148

Query: 133 GQ-IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           G          E  S Q ++DCSI  GN GC GG++ +   YV   GG+ KE  YP+ GK
Sbjct: 149 GAYALAHNGNQESFSEQNIIDCSIPYGNYGCHGGNMYDAFLYVIANGGVAKESAYPFLGK 208

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           QS C + R      +S    +  + E  L+  +A VGP+AV+I+ + + F+ Y SG+YD 
Sbjct: 209 QSSCNYNRNTRGTGMSGSVAIKSESEDDLQTAVANVGPVAVAIDGANNAFRFYYSGVYDS 268

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
             C+S  +NHAM++ GY     +  W+ KN WS +WG +GY+ + RG  N+CGIA  A Y
Sbjct: 269 SRCSSTSLNHAMVVTGYGTYAGKKYWLAKNSWSTNWGQSGYVMMARGKYNQCGIATDASY 328

Query: 307 ALI 309
             +
Sbjct: 329 PTL 331


>gi|12803615|gb|AAH02642.1| Cathepsin S [Homo sapiens]
 gi|49456313|emb|CAG46477.1| CTSS [Homo sapiens]
 gi|60821573|gb|AAX36579.1| cathepsin S [synthetic construct]
 gi|189069420|dbj|BAG37086.1| unnamed protein product [Homo sapiens]
 gi|261858586|dbj|BAI45815.1| cathepsin S [synthetic construct]
          Length = 331

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +    +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNITY--KSNPNWILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP++V ++A   +F LY SG+Y +
Sbjct: 210 DQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W H++G+ GY+ + R   N CGIA++  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|22653679|sp|Q26636.1|CATL_SARPE RecName: Full=Cathepsin L; Contains: RecName: Full=Cathepsin L
           heavy chain; Contains: RecName: Full=Cathepsin L light
           chain; Flags: Precursor
 gi|505140|dbj|BAA03970.1| cathepsin L precursor [Sarcophaga peregrina]
          Length = 339

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 167/308 (54%), Gaps = 16/308 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++K+Y  +  +  +   +  N  KI  HNQ   QG   Y L  N  +D+    + + M 
Sbjct: 34  QHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMN 93

Query: 76  RLTHS-----RIRRTLVRS---PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              H+     R R  LV +   P ++  V +P  +DWRE G +T   +Q  CG+C+AFS 
Sbjct: 94  GYNHTLRQLMRERTGLVGATYIPPAH--VTVPKSVDWREHGAVTGVKDQGHCGSCWAFSS 151

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++GQ F+    +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 152 TGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYP 211

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+G    C F +  I    + +  +P  DE  +K  +AT+GP++V+I+AS  +FQLY+ G
Sbjct: 212 YEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEG 271

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           +Y++  C    ++H +L+VGY  +      W++KN W   WG+ GY+ + R  NN+CGIA
Sbjct: 272 VYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGIA 331

Query: 302 NYAVYALI 309
             + Y  +
Sbjct: 332 TASSYPTV 339


>gi|1483570|emb|CAA68066.1| cathepsin l [Litopenaeus vannamei]
          Length = 328

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 156/283 (55%), Gaps = 9/283 (3%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVRSPES 92
           ++ N + I  HN   + G   +TL+ N   D+    +   M    +   RR T +   + 
Sbjct: 48  FEQNQQFIDDHNARFENGEVTFTLQMNQFGDMTSEEFTATMNGFLNVPSRRPTAILRADP 107

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
           +E+  +P  +DWR KG +TP  +Q+ CG+C+AFS   +++GQ F    ++  LS Q +VD
Sbjct: 108 DET--LPKEVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVD 165

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
           CS   GN+GC GG +     Y++   G+  E+ YPY+ +   C+F   N+    + +  +
Sbjct: 166 CSDKFGNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQDGKCRFDASNVGATDTGYVDV 225

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
               E ALK  +AT+GPI+V+I+AS  +FQ Y  G+Y +E C+S  ++H +L VGY    
Sbjct: 226 EHGSESALKKAVATIGPISVAIDASQPSFQFYHDGVYYEEGCSSTMLDHGVLAVGYGETE 285

Query: 273 -----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
                W++KN W+  WG+ GY+ + R   N CGIA+ A Y L+
Sbjct: 286 KGEAYWLVKNSWNTSWGNKGYIQMSRDKKNNCGIASQASYPLV 328


>gi|196002275|ref|XP_002111005.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190586956|gb|EDV27009.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 325

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 167/302 (55%), Gaps = 21/302 (6%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y  +  D  +   +  N K I  HN ++      + +  N  SDL  + ++K     T
Sbjct: 34  KKYHNQGEDDFRHYVFLQNIKTIAAHNAKST-----FKMAINEFSDLTRKEFVK-----T 83

Query: 79  HSRIRRTLVRSPESNESVL------IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           ++  R ++ +S     + +      +P  +DWR++G++TP  NQ  CG+C+AFS   +++
Sbjct: 84  YNGYRLSMKKSTNKPSTFMAPLNTNMPTEVDWRKEGYVTPIKNQGRCGSCWAFSTTGSLE 143

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F+ T ++  LS Q ++DCS   GN GC GG + +   Y++   G+  E  YPY+G+ 
Sbjct: 144 GQHFRKTGKLVSLSEQNLIDCSAAEGNDGCGGGFMDDAFEYIKLNNGIDTEASYPYEGRD 203

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
            IC++K+ N     + +  +    E  LK  +ATVGPI+V+I+AS  +F +Y +G+Y + 
Sbjct: 204 DICRYKKTNKGAIDTGYMDIKQYSEDDLKAAVATVGPISVAIDASHKSFHMYHTGVYHEP 263

Query: 253 ACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            C+   ++H +L+VGY T N    W++KN W   WG NGY+ + R  +N CGIA  A Y 
Sbjct: 264 ECSQTVLDHGVLVVGYGTENGEDYWLVKNSWGTDWGMNGYIKMSRNRSNNCGIATNASYP 323

Query: 308 LI 309
           LI
Sbjct: 324 LI 325


>gi|139002720|dbj|BAF51966.1| cathepsin K [Carassius auratus]
 gi|139002725|dbj|BAF51967.1| tartrate-resistant acid phosphatase [Carassius auratus]
          Length = 332

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +K++Y     +S ++  W+ N   I  HN+E + G+H Y L  NH  D+      +++  
Sbjct: 37  HKREYNGLDEESIRRAIWEKNMLFIEAHNKEYELGIHTYNLGMNHFGDMTLEEVAEKVMG 96

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L    + +    +   +++V +P  +D+R+ G++T   NQ  CG+C+AFS   A++GQ+ 
Sbjct: 97  L-QMPMYQDQTNTFMPDDTVGLPKSIDYRKLGYVTSVKNQGSCGSCWAFSSVGALEGQLK 155

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K+  ++ +LS Q +VDC  ++ N GC GG + N   YV+   G+  EE YPY G    C 
Sbjct: 156 KTKGQLVDLSPQNLVDC--VTDNDGCGGGYMTNAFRYVKDNQGIDSEEGYPYVGTDQQCA 213

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +           +  +P  +E AL   +A VGP++V I+A   TF  Y SG+Y D  C  
Sbjct: 214 YNSSARAATCKGFKEIPQGNEKALTAAVAKVGPVSVGIDAMQSTFLYYKSGVYYDPNCNK 273

Query: 257 DYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           D VNHA+L VGY      +  WI+KN W   WG  GY+ + R  NN CGIA+ A + ++
Sbjct: 274 DDVNHAVLAVGYGATPKGKKYWIVKNSWGEDWGKKGYVLMARNRNNACGIASLASFPVM 332


>gi|46251290|gb|AAS84611.1| cathepsin L-like cysteine proteinase I variant form precursor
           [Heterodera glycines]
          Length = 374

 Score =  194 bits (492), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 170/305 (55%), Gaps = 9/305 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           ++K+ K Y  +  ++++ L + S  + I  HN+  ++G   + + E H++DL    Y K 
Sbjct: 70  KQKHGKAYADQEVENERMLTYLSAKQFIDKHNEAYKEGKVSFRVGETHIADLPFSEYQKL 129

Query: 73  -EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
               RL    +RR             +P+ +DWR+KG++T   NQ  CG+C+AFS   A+
Sbjct: 130 NGFRRLMGDSLRRNASTFLAPMNVGDLPESVDWRDKGWVTEVKNQGMCGSCWAFSATGAL 189

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ  +    +  LS Q ++DCS   GN+GC GG + N   Y++   G+ KE  YPYK K
Sbjct: 190 EGQHVRDKGHLVSLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNKGIDKETAYPYKAK 249

Query: 192 QS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C FKR ++    S ++ +   DE  L++ +AT GP++V+I+A   +FQLY +G+Y 
Sbjct: 250 TGKKCLFKRNDVGATDSGYNDIAEGDEEDLRMAVATQGPVSVAIDAGHRSFQLYTNGVYF 309

Query: 251 DEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           ++ C    ++H +L+ GY  +      WI+KN W   WG+ GY+ + R  NN CGIA++A
Sbjct: 310 EKECDPQNLDHGVLVEGYGTDPTQGDYWIVKNSWGTRWGEQGYIRMARNRNNNCGIASHA 369

Query: 305 VYALI 309
            + L+
Sbjct: 370 SFPLV 374


>gi|179957|gb|AAC37592.1| cathepsin S [Homo sapiens]
          Length = 331

 Score =  194 bits (492), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 167/303 (55%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +    +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNITY--KSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP++V ++A   +F LY SG+Y +
Sbjct: 210 DLKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W H++G+ GY+ + R   N CGIA++  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|198432217|ref|XP_002130230.1| PREDICTED: similar to cathepsin L [Ciona intestinalis]
          Length = 327

 Score =  194 bits (492), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 154/287 (53%), Gaps = 6/287 (2%)

Query: 29  KKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVR 88
           K++L W+ N + +  HN E  +GLH YT+     +DL    +            R     
Sbjct: 41  KRQLIWEKNLRVVTQHNYEYDEGLHTYTMAMTKFADLENDEFAAMYLPRMRKDSRNGFCS 100

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
           +      V  P  +DWR +G++TP  NQ  CG+C+AFS   +++GQ F  T  +  LS Q
Sbjct: 101 AQPVGGFVENPTSIDWRTRGYVTPVKNQLQCGSCWAFSTTGSLEGQHFAKTKNLVSLSEQ 160

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
           Q++DCS   G+ GC GG +    +Y+  AGG+  E DYPY+ +   C+F   +I   ++ 
Sbjct: 161 QLMDCSFKEGDEGCGGGIMDYAFDYIFLAGGVESEADYPYEARNDHCRFDNSSIAATLTG 220

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
              +    E  L+  + ++GP++V+I+AS  +FQLY SG+  +  C++  ++H +L VGY
Sbjct: 221 CVDVTSGSETQLEKAVGSIGPVSVAIDASHISFQLYGSGVNYEPMCSTTTLDHGVLAVGY 280

Query: 269 TRNS----WILKNWWSHHWGD-NGYMYL-KRGNNRCGIANYAVYALI 309
             ++    WI+KN W   WG  NGY+ + K  NN CGIA  A Y  +
Sbjct: 281 GADNGNEYWIVKNSWGEGWGHLNGYIKMSKNRNNNCGIATQASYPTV 327


>gi|54020908|ref|NP_001005695.1| cathepsin S precursor [Xenopus (Silurana) tropicalis]
 gi|49522293|gb|AAH75261.1| cathepsin S [Xenopus (Silurana) tropicalis]
          Length = 333

 Score =  193 bits (491), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 159/304 (52%), Gaps = 9/304 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  + KDY  +  D ++++ W+ N   ++ HN E   G+H Y L  NHL+D+       +
Sbjct: 31  KNTHNKDYEDEIEDLQRRITWEKNLNLVNMHNLEYSMGMHTYELGMNHLADMTSEEIKSK 90

Query: 74  MTRLT---HSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           +T L     S  + T      S     +PD +DWR+KG ++   NQ  CG+C+AFS   A
Sbjct: 91  LTGLILPPQSERQATFSSQKNSTFGGKVPDSIDWRDKGCVSDVKNQGGCGSCWAFSAVGA 150

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+   T ++  LS Q +VDCS   GN GC GG +     YV    G+  +  YPY  
Sbjct: 151 LEGQLMLKTGKLVSLSPQNLVDCSSKYGNKGCGGGFMTQAFQYVIDNKGIDSDSYYPYHA 210

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C +         + ++ + P  E  LK  L ++GPI+V+I+ +  +F LY SG+Y 
Sbjct: 211 MDEKCHYDPTGKASTCAKYTEIVPGTEDNLKQALGSIGPISVAIDGTRPSFFLYRSGVYS 270

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D  C+ + VNH +L VGY     ++ W+LKN W   +GD GY+ + R   N CG+A+Y  
Sbjct: 271 DPTCSHE-VNHGVLAVGYGNLNGQDFWLLKNSWGTKYGDQGYVRIARNKGNLCGVASYTC 329

Query: 306 YALI 309
           Y  I
Sbjct: 330 YPEI 333


>gi|301609086|ref|XP_002934107.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 332

 Score =  193 bits (491), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 166/301 (55%), Gaps = 9/301 (2%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           K ++K Y+    +  ++  W+   K I  HN E   GLH Y +  N L D+        M
Sbjct: 35  KTHQKTYKDTEEERTRRTIWEETLKFITVHNLEYSLGLHTYEVGMNRLGDMTGEEVAATM 94

Query: 75  TRLTHS-RIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           T  T S      +   P+     L P  +DWR KG +TP   Q DCG+CYAFS   A++ 
Sbjct: 95  TGYTGSDHSLANMSHVPKEILEALPPASIDWRTKGCVTPVRKQGDCGSCYAFSTVGAMEC 154

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+ K T  +  LS Q++VDCS   GN GC  G+L +   Y++   G+M+E  Y Y G+++
Sbjct: 155 QVKKKTGRLVILSPQELVDCSYTEGNNGCINGNLLSAFRYME-KYGIMEESSYRYTGQEA 213

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+ +R +  + +++   +   DE+ LK  + TVGP++V+++A  + F+ Y SG+Y D  
Sbjct: 214 DCR-RRVHTGLKVNAIYNVTDGDENVLKNAVGTVGPVSVAVDARQNGFRTYKSGVYFDPY 272

Query: 254 CTSDYVNHAMLLVGYTR----NSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           CT  +V HA+L+VGY R    + W++KN W   WGD GY+ + R  N+ CGIAN A Y  
Sbjct: 273 CTL-HVTHAVLVVGYGREYGNDYWLVKNSWGVDWGDQGYVKMARNRNSHCGIANQAFYPT 331

Query: 309 I 309
           +
Sbjct: 332 V 332


>gi|32394728|gb|AAM96000.1| cathepsin L precursor [Metapenaeus ensis]
          Length = 322

 Score =  193 bits (491), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 166/307 (54%), Gaps = 12/307 (3%)

Query: 13  PQKKYKKDYRKKATDSKKKLHWQS----NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPR 68
           P + +K  Y +    +++ L+ QS    N + I  HN + + G   +TL+ N   D+   
Sbjct: 18  PWQDFKVQYGRHYGTAREDLYRQSVFEQNQQFIEDHNAKFENGEVTFTLKMNQFGDMTSE 77

Query: 69  HYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
            +   M    +   R  +      +E+  +P H+DWR KG +TP  +Q+ CG+C+AFS  
Sbjct: 78  EFAATMNGFLNVPTRHPVAILEADDET--LPKHVDWRTKGAVTPVKDQKQCGSCWAFSTT 135

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            +++GQ F    ++  LS Q +VDCS   GN+GC GG +     Y++   G+  EE YPY
Sbjct: 136 GSLEGQHFLKDGKLVSLSEQNLVDCSGKFGNMGCCGGLMDQAFKYIKENKGIDTEESYPY 195

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           + +   C+F   N+    + +  +   +E++L   +A +GPI+V+I+AS  +FQ Y  G+
Sbjct: 196 EAQDGKCRFDSSNVGATDTGFVDIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGV 255

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           Y ++ C+S  ++H +L +GY         W++KN W+  WGD G++ + R   N CGIA+
Sbjct: 256 YYEKECSSTMLDHGVLAIGYGETDDGKEYWLVKNSWNTSWGDKGFIQMSRNKKNNCGIAS 315

Query: 303 YAVYALI 309
            A Y L+
Sbjct: 316 QASYPLV 322


>gi|32394730|gb|AAM96001.1| cathepsin L precursor [Metapenaeus ensis]
          Length = 306

 Score =  193 bits (491), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 166/307 (54%), Gaps = 12/307 (3%)

Query: 13  PQKKYKKDYRKKATDSKKKLHWQS----NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPR 68
           P + +K  Y +    +++ L+ QS    N + I  HN + + G   +TL+ N   D+   
Sbjct: 2   PWQDFKVQYGRHYGTAREDLYRQSVFEQNQQFIEDHNAKFENGEVTFTLKMNQFGDMTSE 61

Query: 69  HYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
            +   M    +   R  +      +E+  +P H+DWR KG +TP  +Q+ CG+C+AFS  
Sbjct: 62  EFAATMNGFLNVPTRHPVAILEADDET--LPKHVDWRTKGAVTPVKDQKQCGSCWAFSTT 119

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            +++GQ F    ++  LS Q +VDCS   GN+GC GG +     Y++   G+  EE YPY
Sbjct: 120 GSLEGQHFLKDGKLVSLSEQNLVDCSGKFGNMGCCGGLMDQAFKYIKENKGIDTEESYPY 179

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           + +   C+F   N+    + +  +   +E++L   +A +GPI+V+I+AS  +FQ Y  G+
Sbjct: 180 EAQDGKCRFDSSNVGATDTGFVDIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGV 239

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           Y ++ C+S  ++H +L +GY         W++KN W+  WGD G++ + R   N CGIA+
Sbjct: 240 YYEKECSSTMLDHGVLAIGYGETDDGKEYWLVKNSWNTSWGDKGFIQMSRNKKNNCGIAS 299

Query: 303 YAVYALI 309
            A Y L+
Sbjct: 300 QASYPLV 306


>gi|340368360|ref|XP_003382720.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 326

 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 152/297 (51%), Gaps = 10/297 (3%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  K  +  +++ W+SN K +  HN  + +   G+T+  N  +DL    +     
Sbjct: 29  KYNKVYETKDIELARQVIWESNKKFVENHNANSDK--FGFTVAMNEFADLDAAEFASIFN 86

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
                 +     +       V +   +DWREKG +T   NQ  CG+C++FS   +++GQ 
Sbjct: 87  GFL--SLPNNSTKDFYKKTGVKVAATVDWREKGAVTAIKNQGKCGSCWSFSTTGSLEGQH 144

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F  T  +  LS QQ VDCS   GN GC GG++ N   Y++   G   E  YPY  +   C
Sbjct: 145 FLKTGTLLSLSEQQFVDCSTKFGNHGCKGGTMDNAFRYLETVSGDETEMMYPYTAEDGFC 204

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           KF+     V    +  +P  DE AL+  +ATVGPI+V+I+A   +FQLY  G+Y +  C+
Sbjct: 205 KFRSTEGKVKCEGYKDIPRDDEDALREAVATVGPISVAIDAGHSSFQLYKEGVYYNPTCS 264

Query: 256 SDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           S  ++H +L VGY     +   W++KN W   WG  GY+ + R   N CGIA  A Y
Sbjct: 265 STKLDHGVLAVGYGTYEGSEEYWLVKNSWGPSWGMEGYIMMSRNRENNCGIATMASY 321


>gi|50761194|ref|XP_418273.1| PREDICTED: cathepsin L1 [Gallus gallus]
          Length = 336

 Score =  193 bits (490), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 166/306 (54%), Gaps = 19/306 (6%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY---IKE 73
           Y K+Y  +A   ++++ W++N ++I  HN E  QG H + L  NH  DL    +   +  
Sbjct: 37  YAKEYPGEAELIRREV-WENNLRRIEQHNWEESQGQHTFRLGMNHYGDLMDEEFNQLLNG 95

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
              + H     T     +++ +   P  +DWR +G++TP  NQ  CG+C+AFS   A++G
Sbjct: 96  FAPVQHEEPALTF----QASAAQKTPAEVDWRMRGYVTPVKNQGHCGSCWAFSATGALEG 151

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ- 192
            +F  T ++  LS Q ++DCS   GN GC GG +     YV   GG+  E  YPY+    
Sbjct: 152 LVFNWTGKLAVLSEQNLIDCSWKLGNNGCQGGYMTRAFQYVHDNGGMNSEHIYPYQATDT 211

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
           S C++   +   + S+  ++    E AL+  +ATVGP++V+++AS   F  Y SGI++  
Sbjct: 212 SSCRYNPADRAANCSTVWLVAQGSEAALEQAVATVGPVSVAVDASSFFFHFYKSGIFNSM 271

Query: 253 ACTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
            C S  VNH ML VGY  +         WILKN WS  WG+ GY+ L +G NN CG+AN 
Sbjct: 272 FC-SQKVNHGMLAVGYGISQEARKNVSYWILKNSWSEVWGEKGYIRLLKGVNNHCGVANQ 330

Query: 304 AVYALI 309
           A + L+
Sbjct: 331 ASFPLL 336


>gi|126681066|gb|ABO26562.1| cathepsin L-like cysteine protease [Ixodes ricinus]
          Length = 335

 Score =  193 bits (490), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 163/307 (53%), Gaps = 13/307 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y  +  +  +   +  N  KI  HN++  +G   Y++  N   D+    ++  
Sbjct: 31  KAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNEFGDMLHHEFVS- 89

Query: 74  MTRLTHSRIRRTLVRS------PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
            TR    R  +   R       PE+ E   +P  +DWR KG +TP  NQ  CG+C+AFS 
Sbjct: 90  -TRNGFKRNYKDQPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQGQCGSCWAFSA 148

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             +++GQ F+ +  +  LS Q +V CS   GN GC GG + +   Y++   G+  E+ YP
Sbjct: 149 TGSLEGQHFRKSGSMVSLSEQNLVGCSTDFGNNGCEGGLMDDAFKYIRANKGIDTEKSYP 208

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y G    C FK+  +    S +  +    E  LK  +ATVGPI+V+I+AS  +FQ Y+ G
Sbjct: 209 YNGTDGTCHFKKSTVGATDSGFVDIKEGSETQLKKAVATVGPISVAIDASHESFQFYSDG 268

Query: 248 IYDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           +YD+  C S+ ++H +L+VGY T N    W +KN W   WGD GY+ + R   N+CGIA+
Sbjct: 269 VYDEPECDSESLDHGVLVVGYGTLNGTDYWFVKNSWGTTWGDEGYIRMSRNKKNQCGIAS 328

Query: 303 YAVYALI 309
            A   L+
Sbjct: 329 SASIPLV 335


>gi|14041143|emb|CAA71554.1| cathepsin [Geodia cydonium]
          Length = 322

 Score =  193 bits (490), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 159/303 (52%), Gaps = 17/303 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  +  D  ++  W SN K +   + E +    GYT+  N  +DL PR ++    
Sbjct: 25  KYNKQYSSQEEDYLRQRVWLSNLKFVEEFDSERE----GYTVAMNEFADLDPREFVSHYN 80

Query: 76  RLTHSRIRRTLVRSPE----SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
            L     RR    S E      +   +P  +DWR KG++T   NQ  CG+C+AFS   ++
Sbjct: 81  GLR----RRPHTSSGEPCTLGEDVSALPTTVDWRTKGYVTGVKNQGQCGSCWAFSATGSL 136

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F +T ++  LS Q +VDCS   GN GC GG   +   YV   GG+  E  YPY  +
Sbjct: 137 EGQHFNATGKLVSLSEQNLVDCSSAEGNEGCNGGLPDDAFKYVIKNGGIDTEASYPYVAR 196

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C +   NI    SS+  +  + E  L+V  ATVGPI V I+AS   FQLY  G+Y  
Sbjct: 197 DEKCHYSSANIGSTCSSYVDIESKSEAQLQVASATVGPIPVGIDASHLGFQLYDGGVYHS 256

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           + C+   ++H +L+VGY     ++ W++KN W  +WG +G M + R  +N CGIA  A Y
Sbjct: 257 DLCSQTRLDHGVLVVGYGVYKEKDYWMVKNSWGTNWGISGDMMMSRNRDNNCGIATMASY 316

Query: 307 ALI 309
            ++
Sbjct: 317 PVV 319


>gi|326934570|ref|XP_003213361.1| PREDICTED: cathepsin L1-like [Meleagris gallopavo]
          Length = 332

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 19/306 (6%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY---IKE 73
           Y K+Y  +A   ++++ W+ N ++I  HN E  QG H + L  NH  DL    +   +  
Sbjct: 33  YAKEYPGEAEVIRREV-WEKNLRRIEQHNWEESQGQHTFRLGMNHYGDLMDEEFNQLLNG 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
            T + H     T     +++ +   P  +DWR +G++TP  NQ  CG+C+AFS   A++G
Sbjct: 92  FTPVQHEEPALTF----QASAAQKTPAEVDWRVRGYVTPVKNQGHCGSCWAFSATGALEG 147

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ- 192
            +F  T ++  LS Q ++DCS   GN GC GG +     YV   GG+  E  YPY+    
Sbjct: 148 LVFNWTRKLAVLSEQNLIDCSRKLGNNGCQGGYMTRAFQYVHDNGGMNSEHVYPYQATDT 207

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
           S C++   +   + SS  ++    E AL+  +ATVGP++V+++AS   F  Y SGI+   
Sbjct: 208 SSCRYNPGDRAANCSSVWLVAQGSEAALEQAVATVGPVSVAVDASSFFFHFYKSGIFSSM 267

Query: 253 ACTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
            C S  VNH ML VGY  +         WILKN WS  WG+ GY+ L +G +N CG+AN 
Sbjct: 268 FC-SQTVNHGMLAVGYGTSQEGRKNMSYWILKNSWSEVWGEQGYIRLLKGASNHCGVANQ 326

Query: 304 AVYALI 309
           A + L+
Sbjct: 327 ASFPLL 332


>gi|410990002|ref|XP_004001239.1| PREDICTED: cathepsin L1-like isoform 1 [Felis catus]
          Length = 333

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 160/289 (55%), Gaps = 12/289 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W  N K I  HN+E  Q  H +T+  N   D+    + + M  L   + ++  V  
Sbjct: 48  RRAVWGENMKMIVQHNREYNQKEHSFTMAMNGFGDMTNEEFRQVMNGLQIQKHKKGKVFQ 107

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
           P       IP  ++WR+KG++TP  NQ  C + +AFS   AI+GQ+F  T ++  LS Q 
Sbjct: 108 PPLFAE--IPSSVNWRKKGYVTPTKNQGQCASGWAFSATGAIEGQMFGKTHKLVSLSEQN 165

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW 209
           ++DC+   GN GC+GGS+ N   YV+  GGL  EE YPY  +   CK+   +   DI+ +
Sbjct: 166 LLDCAWSEGNGGCSGGSMGNAFQYVKDNGGLDSEESYPYHAQLQSCKYNPESSAADITGF 225

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY- 268
             + P+ E+ L  ++A VGP++ +I+AS  TF+ Y  GIY D  C+ + ++H +L+VGY 
Sbjct: 226 LTI-PKTEYKLMRSVAIVGPVSAAIDASLDTFRFYDQGIYYDSNCSHEILHHGVLIVGYG 284

Query: 269 -------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                   +  WI+KN W   WG +GY+ + K  +N CGIA+ A +  +
Sbjct: 285 FEGAELDNKKYWIVKNSWGEAWGIDGYILMAKDRDNHCGIASLASFPTV 333


>gi|16304178|gb|AAL16954.1|AF426414_1 cathepsin L-like cysteine protease precursor [Delia radicum]
          Length = 337

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 169/308 (54%), Gaps = 17/308 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++K++  +  +  +   +  N  KI  HNQ   QG   + L  N  SD+    + + M 
Sbjct: 33  EHRKNFLSEVEERFRMKIFNENRHKIAKHNQLYAQGKVSFKLGLNKYSDMLYHEFKETMN 92

Query: 76  RLTHSRIRRTL--------VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              H+ +R+ L        +  P +N  V IP  +DWR+ G +T   +Q  CG+C+AFS 
Sbjct: 93  GYNHT-MRKVLRAQGFSGIIYIPPAN--VQIPKSVDWRQHGAVTAVKDQGHCGSCWAFSS 149

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
            +A++GQ F+    +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 150 TAALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYP 209

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+G    C F +  +    + +  +P  DE AL   +AT+GP++V+I+AS  +FQLY+ G
Sbjct: 210 YEGIDDSCHFTKSGVGATDTGFVDIPQGDEEALMKAVATMGPVSVAIDASHESFQLYSEG 269

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           +Y++  C +  ++H +L+VGY  +      W++KN W   WGD GY+ + R  +N+CGIA
Sbjct: 270 VYNEPECDAQNLDHGVLVVGYGTDKTGLDYWLVKNSWGTTWGDQGYIKMARNQDNQCGIA 329

Query: 302 NYAVYALI 309
             + Y  +
Sbjct: 330 TASSYPTV 337


>gi|15826035|pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An
           Irreversible Vinyl Sulfone Inhibitor
 gi|15826036|pdb|1FH0|B Chain B, Crystal Structure Of Human Cathepsin V Complexed With An
           Irreversible Vinyl Sulfone Inhibitor
          Length = 221

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 96/218 (44%), Positives = 136/218 (62%), Gaps = 9/218 (4%)

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
           +P  +DWR+KG++TP  NQ+ CG+C+AFS   A++GQ+F+ T ++  LS Q +VDCS   
Sbjct: 1   LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQ 60

Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
           GN GC GG +     YV+  GGL  EE YPY     ICK++  N V   + ++V+ P  E
Sbjct: 61  GNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVAQDTGFTVVAPGKE 120

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY------TRN 271
            AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY      + N
Sbjct: 121 KALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSDN 180

Query: 272 S--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
           S  W++KN W   WG NGY+ + K  NN CGIA  A Y
Sbjct: 181 SKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASY 218


>gi|269954686|ref|NP_954599.2| uncharacterized protein LOC218275 precursor [Mus musculus]
          Length = 330

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 169/303 (55%), Gaps = 12/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K++K Y     +++K+  W++N K I  HN++  +G HG+ L  N   DL    + + 
Sbjct: 33  KTKHRKTYNMN-EEAQKRAVWENNMKMIGLHNEDYLKGKHGFNLEMNAFGDLTNTEFREL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           MT   +      T+ + P   +   +P  +DWR+ G++TP  +Q  CG+C+AFS   +++
Sbjct: 92  MTGFQSMGHKEMTIFQEPLLGD---VPKSVDWRDHGYVTPVKDQGHCGSCWAFSAVGSLE 148

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQIF+ T ++  LS Q ++DCS   GN+GC GG +     YV+   GL   E Y Y+   
Sbjct: 149 GQIFRKTGKLVPLSEQNLMDCSWSYGNVGCNGGLMELAFQYVKENRGLDTRESYAYEAWD 208

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C++      V+I+ + V  P  E AL   +A+VGP++V I+   H+F+ Y  G Y + 
Sbjct: 209 GPCRYDPKYSAVNITGF-VKVPLSEDALMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEP 267

Query: 253 ACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
            C+S  ++HA+L+VGY   S     W++KN W   WG +GY+ + K  +N CGIA YA+Y
Sbjct: 268 DCSSTNLDHAVLVVGYGEESDGRKYWLVKNSWGEDWGMDGYIKMAKDRDNNCGIATYAIY 327

Query: 307 ALI 309
             +
Sbjct: 328 PTV 330


>gi|74211558|dbj|BAE26509.1| unnamed protein product [Mus musculus]
          Length = 338

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 169/303 (55%), Gaps = 12/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K++K Y     +++K+  W++N K I  HN++  +G HG+ L  N   DL    + + 
Sbjct: 41  KTKHRKTYNMN-EEAQKRAVWENNMKMIGLHNEDYLKGKHGFNLEMNAFGDLTNTEFREL 99

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           MT   +      T+ + P   +   +P  +DWR+ G++TP  +Q  CG+C+AFS   +++
Sbjct: 100 MTGFQSMGHKEMTIFQEPLLGD---VPKSVDWRDHGYVTPVKDQGHCGSCWAFSAVGSLE 156

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQIF+ T ++  LS Q ++DCS   GN+GC GG +     YV+   GL   E Y Y+   
Sbjct: 157 GQIFRKTGKLVPLSEQNLMDCSWSYGNVGCNGGLMELAFQYVKENRGLDTRESYAYEAWD 216

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C++      V+I+ + V  P  E AL   +A+VGP++V I+   H+F+ Y  G Y + 
Sbjct: 217 GPCRYDPKYSAVNITGF-VKVPLSEDALMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEP 275

Query: 253 ACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
            C+S  ++HA+L+VGY   S     W++KN W   WG +GY+ + K  +N CGIA YA+Y
Sbjct: 276 DCSSTNLDHAVLVVGYGEESDGRKYWLVKNSWGEDWGMDGYIKMAKDRDNNCGIATYAIY 335

Query: 307 ALI 309
             +
Sbjct: 336 PTV 338


>gi|148709355|gb|EDL41301.1| cDNA sequence BC051665 [Mus musculus]
          Length = 349

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 169/303 (55%), Gaps = 12/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K++K Y     +++K+  W++N K I  HN++  +G HG+ L  N   DL    + + 
Sbjct: 52  KTKHRKTYNMNE-EAQKRAVWENNMKMIGLHNEDYLKGKHGFNLEMNAFGDLTNTEFREL 110

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           MT   +      T+ + P   +   +P  +DWR+ G++TP  +Q  CG+C+AFS   +++
Sbjct: 111 MTGFQSMGHKEMTIFQEPLLGD---VPKSVDWRDHGYVTPVKDQGHCGSCWAFSAVGSLE 167

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQIF+ T ++  LS Q ++DCS   GN+GC GG +     YV+   GL   E Y Y+   
Sbjct: 168 GQIFRKTGKLVPLSEQNLMDCSWSYGNVGCNGGLMELAFQYVKENRGLDTRESYAYEAWD 227

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C++      V+I+ + V  P  E AL   +A+VGP++V I+   H+F+ Y  G Y + 
Sbjct: 228 GPCRYDPKYSAVNITGF-VKVPLSEDALMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEP 286

Query: 253 ACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
            C+S  ++HA+L+VGY   S     W++KN W   WG +GY+ + K  +N CGIA YA+Y
Sbjct: 287 DCSSTNLDHAVLVVGYGEESDGRKYWLVKNSWGEDWGMDGYIKMAKDRDNNCGIATYAIY 346

Query: 307 ALI 309
             +
Sbjct: 347 PTV 349


>gi|151176971|gb|ABR88030.1| digestive cysteine protease [Dermestes frischii]
          Length = 339

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 173/322 (53%), Gaps = 17/322 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  ++W    +  +K+YK D  +K    + K+  +++HK +   N+  + GL  Y L+ N
Sbjct: 22  LVQEQWGTFKLQHKKQYKSDTEEKF---RMKIFMENSHK-VAKXNKLYEMGLVSYKLKIN 77

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLI-------PDHLDWREKGFITPD 113
             +D+    ++  +     ++    L  S +   +  I       P+++DWRE G +T  
Sbjct: 78  KYADMLHHEFVHTVNGFNRTKNTPLLGTSEDEQGATFIAPANVKFPENVDWREHGAVTXV 137

Query: 114 WNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNY 173
            +Q  CG+C++FS   A++GQ F+ T+++  LS Q +VDCS   GN GC GG + N   Y
Sbjct: 138 KDQGHCGSCWSFSATGALEGQHFRKTNKLVSLSEQNLVDCSTKFGNDGCNGGLMDNAFKY 197

Query: 174 VQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVS 233
           V++  G+  E  YPY      C +           +  +P  DE  L   +ATVGP++V+
Sbjct: 198 VKYNHGIDTEASYPYHADDEKCHYNPKTSGATDRGFVDIPTGDEEKLMAAVATVGPVSVA 257

Query: 234 INASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGY 288
           I+AS  +FQLY+ G+Y D  C+S+ ++H +L+VGY      ++ WI+KN W   WG+ GY
Sbjct: 258 IDASHESFQLYSEGVYYDPECSSEELDHGVLVVGYGTDENGQDYWIVKNSWGESWGEQGY 317

Query: 289 MYLKRG-NNRCGIANYAVYALI 309
           + + R  +N CGIA  A Y L+
Sbjct: 318 IKMARNRDNNCGIATQASYPLV 339


>gi|358255476|dbj|GAA57175.1| cathepsin L [Clonorchis sinensis]
          Length = 385

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/313 (35%), Positives = 167/313 (53%), Gaps = 20/313 (6%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           YK++Y   +   ++   + +N  +I  HN    QG   YT+  N  SD      I  +  
Sbjct: 73  YKRNYIDPSEHERRFKIFANNFVRISKHNVRFIQGQVSYTMGINEFSDKVIGLIIHTICF 132

Query: 77  LTHSRIRR------TLVRSPESNESVLI----PDHLDWREKGFITPDWNQEDCGACYAFS 126
            T   ++R      +L  S + ++ + I    P  +DWR KG +TP  NQ +CG+C+AFS
Sbjct: 133 QTDEELKRLRCFRGSLNASRDGSKYITIAAPPPSEIDWRNKGAVTPVKNQGNCGSCWAFS 192

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              AI+GQ F +T  +  LS QQ+VDCS   GN  C GG + N   YV+ + G+  E  Y
Sbjct: 193 ATGAIEGQNFLATGNLVSLSEQQLVDCSSEYGNNACNGGLMDNAFKYVKDSNGIDTEASY 252

Query: 187 PYKGKQS-----ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTF 241
           PY   ++      C+F     VV ++ +  LP      LK  +   GPI+V+INA   +F
Sbjct: 253 PYVSGETGDANPTCRFNLKEAVVRVTGYIDLPRGQVSELKQAVGHYGPISVAINAGLPSF 312

Query: 242 QLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NN 296
             Y SG+Y D+ C+SD ++H +LLVGY   +    W++KN W  HWG+NGY+ + R  NN
Sbjct: 313 MSYKSGVYSDDQCSSDDLDHGVLLVGYGEENGIPYWLIKNSWGPHWGENGYVKILRDHNN 372

Query: 297 RCGIANYAVYALI 309
            CG+A+ A Y L+
Sbjct: 373 LCGVASMASYPLM 385


>gi|30388235|gb|AAH51665.1| CDNA sequence BC051665 [Mus musculus]
          Length = 330

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 169/303 (55%), Gaps = 12/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K++K Y     +++K+  W++N K I  HN++  +G HG+ L  N   DL    + + 
Sbjct: 33  KTKHRKTYSMNE-EAQKRAVWENNMKMIGLHNEDYLKGKHGFNLEMNAFGDLTNTEFREL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           MT   +      T+ + P   +   +P  +DWR+ G++TP  +Q  CG+C+AFS   +++
Sbjct: 92  MTGFQSMGHKEMTIFQEPLLGD---VPKSVDWRDHGYVTPVKDQGHCGSCWAFSAVGSLE 148

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQIF+ T ++  LS Q ++DCS   GN+GC GG +     YV+   GL   E Y Y+   
Sbjct: 149 GQIFRKTGKLVPLSEQNLMDCSWSYGNVGCNGGLMELAFQYVKENRGLDTRESYAYEAWD 208

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C++      V+I+ + V  P  E AL   +A+VGP++V I+   H+F+ Y  G Y + 
Sbjct: 209 GPCRYDPKYSAVNITGF-VKVPLSEDALMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEP 267

Query: 253 ACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
            C+S  ++HA+L+VGY   S     W++KN W   WG +GY+ + K  +N CGIA YA+Y
Sbjct: 268 DCSSTNLDHAVLVVGYGEESDGRKYWLVKNSWGEDWGMDGYIKMAKDRDNNCGIATYAIY 327

Query: 307 ALI 309
             +
Sbjct: 328 PTV 330


>gi|391336140|ref|XP_003742440.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 158/296 (53%), Gaps = 7/296 (2%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K YR    +  ++  ++ N   I   N+     L G+TL  N  +D+    +   +  L 
Sbjct: 37  KSYRDGQEELIRRFIFEDNLHTIEEFNR-VNASLAGFTLGVNEFADMTNTEFSNMLLGL- 94

Query: 79  HSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKS 138
             R +       ES+    +P  +DW +KG++T   NQ  CG+C+AFS   +++GQ+FK 
Sbjct: 95  GGRNKIAGDSVFESSHVQDLPAEVDWTQKGYVTEVKNQGQCGSCWAFSTTGSLEGQVFKK 154

Query: 139 TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFK 198
           T ++  LS Q +VDCS   GN GC GG +     Y++  GG+  E  YPY G    C+F 
Sbjct: 155 TGKLVSLSEQNLVDCSTSEGNQGCNGGLMDQAFTYIKKNGGIDTEAAYPYTGSDGTCRFL 214

Query: 199 RPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDY 258
              +   +S +  +   DE+ALK  +ATVGPI+V+I+AS   FQ Y  G+Y+   C+S  
Sbjct: 215 ENKVGATVSGFVDVKSGDENALKEAVATVGPISVAIDASSIFFQFYRGGVYNPWFCSSTE 274

Query: 259 VNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           ++H +L+VGY     ++ W++KN W   WG  GY+ + R   NRCGIA  A Y  +
Sbjct: 275 LDHGVLVVGYGTEGGKDYWLVKNSWGSSWGLKGYIKMVRNKKNRCGIATQASYPTV 330


>gi|198432221|ref|XP_002130541.1| PREDICTED: similar to cathepsin L [Ciona intestinalis]
          Length = 330

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 159/290 (54%), Gaps = 9/290 (3%)

Query: 29  KKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY-IKEMTRLTHSRIRRTLV 87
           K++L W+ N + +  HN E  +GLH YT+     +DL    +    +  +   R    + 
Sbjct: 41  KRQLIWEKNLRVVTQHNYEYDEGLHTYTMAMTKFADLENDEFNTMYLASMPADRKNELVC 100

Query: 88  RSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
           +    ++    P  +DWR +G++TP  NQ  CG+C+AFS   +++GQ F  T ++  LS 
Sbjct: 101 KKQTIDKFAQNPTTVDWRTQGYVTPVKNQLQCGSCWAFSATGSLEGQHFAKTKKLVSLSE 160

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDIS 207
           QQ++DCS   G+LGC GG       Y+   GG+  E +YPY+ K  +C+F    +   ++
Sbjct: 161 QQLIDCSTKQGDLGCGGGYPDWAFAYINQVGGIESETNYPYEAKNDVCRFNVSEVAATLT 220

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSD--YVNHAMLL 265
               + P  E  L+  + ++GP++V I+AS  +FQLY SGIY ++ C+S    ++H +L 
Sbjct: 221 GCVDITPDSETQLEKAVGSIGPVSVLIDASHISFQLYGSGIYYEQQCSSSPASLDHGVLA 280

Query: 266 VGYTRNS----WILKNWWSHHWGD-NGYMYL-KRGNNRCGIANYAVYALI 309
           VGY  ++    W++KN W   WG   GY+ + K  NN CGIA  A Y ++
Sbjct: 281 VGYGADNGQEYWMVKNSWGEGWGKLGGYIKMAKNKNNNCGIATQASYPIV 330


>gi|354502591|ref|XP_003513367.1| PREDICTED: cathepsin L1-like isoform 1 [Cricetulus griseus]
          Length = 330

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 167/317 (52%), Gaps = 22/317 (6%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSK---KKLHWQSNHKKIHTHNQEAQQGLHGYTLRE 59
           N EW        +K+K  YRK   +++   ++  W+ N K I  HN+E  QG + +T+  
Sbjct: 26  NAEW--------QKWKTKYRKTYINNEEVERRALWEENMKLIQLHNKEYHQGKNTFTMAM 77

Query: 60  NHLSDLHPRHYIKEMTRLTHSRIRRT-LVRSPESNESVLIPDHLDWREKGFITPDWNQED 118
           N   D  P    + +T       + T + + P   +   +P  +DWR+ G++TP  +Q  
Sbjct: 78  NAFGDQRPLELAQTLTAFQSQEAKETNIFQEPLLGD---VPKSVDWRKHGYVTPVKDQGS 134

Query: 119 CGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAG 178
           C +C+AFS   +++GQ+F+ T ++  LS Q +VDCS    N GC GG   +   Y++  G
Sbjct: 135 CVSCWAFSAVGSLEGQMFRKTGKLVPLSEQNLVDCSRSQHNNGCHGGLFTSAFQYIKDNG 194

Query: 179 GLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASP 238
           GL   E YPY+ +   C++   +   +I+ + V+ P +E AL   +ATVGPI++ I+   
Sbjct: 195 GLDTSESYPYEAQDGPCRYDPKHSAANITGFVVV-PSNEEALMKAVATVGPISIGISVRL 253

Query: 239 HTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYL-K 292
            +   Y SG Y D  C + Y NH++LLVGY   S     W++KN W   WG +GY+ + K
Sbjct: 254 RSLLFYKSGFYYDPDCYNHYPNHSVLLVGYGEESDGQKYWLVKNSWGEEWGMDGYIKIAK 313

Query: 293 RGNNRCGIANYAVYALI 309
             NN C IA  A Y  +
Sbjct: 314 DRNNHCSIATIAAYPTV 330


>gi|432114312|gb|ELK36240.1| Aryl hydrocarbon receptor nuclear translocator [Myotis davidii]
          Length = 897

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 7/213 (3%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +D+R+KG++TP  NQ  CG+C+AFS   A++GQ+ K T ++  LS Q +VDC  +S 
Sbjct: 684 PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLMKKTGKLLNLSPQNLVDC--VSE 741

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   YVQ   G+  E+ YPY G+   C +           +  +P  +E 
Sbjct: 742 NDGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYKEIPEGNEK 801

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWI 274
           ALK  +A VGPI+V+I+AS  +FQ Y+ G+Y DE C SD +NHA+L VGY     +  WI
Sbjct: 802 ALKKAVARVGPISVAIDASLSSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWI 861

Query: 275 LKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           +KN W  +WG+ GY+ + R  NN CGIAN A +
Sbjct: 862 IKNSWGENWGNKGYILMARNKNNACGIANLASF 894


>gi|334324655|ref|XP_001370975.2| PREDICTED: cathepsin S-like isoform 1 [Monodelphis domestica]
          Length = 331

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/304 (36%), Positives = 163/304 (53%), Gaps = 12/304 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K + K Y+ +  +  ++L W+ N K +  HN E   GLH Y L  NHL D+     I  
Sbjct: 32  KKTHGKQYKGQNEEIARRLIWEKNLKYVTLHNLEHSMGLHSYDLSMNHLGDMTSEEVISL 91

Query: 74  MT--RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           M+  R+ +   R T  R   + +   +PD +DWREKG +T    Q  CG+C+AFS   A+
Sbjct: 92  MSSLRIPNQWNRNTTYRLSSNQK---LPDSVDWREKGCVTEVKYQGSCGSCWAFSAVGAL 148

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           + Q+   T ++  LS Q +VDCS     N GC GG + +   YV    G+  +  YPYK 
Sbjct: 149 EAQLKLKTGKLVSLSAQNLVDCSTDKYDNHGCNGGFMTSAFQYVIDNNGIDSDVSYPYKA 208

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C++   +     S ++ LP   E ALK  +A  GP++V I+A   +F LY SG+Y 
Sbjct: 209 TDGKCQYNPASRAATCSKYTELPYGSEEALKEAVANKGPVSVGIDAKTPSFFLYKSGVYY 268

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D +CT   VNH +L++GY     ++ W++KN W  H+GD GY+ + R   N CGIAN+  
Sbjct: 269 DPSCTQK-VNHGVLVIGYGNLDGQDYWLVKNSWGLHFGDKGYVRIARNRGNHCGIANFPS 327

Query: 306 YALI 309
           Y  I
Sbjct: 328 YPEI 331


>gi|340368362|ref|XP_003382721.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/317 (35%), Positives = 165/317 (52%), Gaps = 20/317 (6%)

Query: 2   TNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENH 61
           T+ EW +     +  Y K Y     +  ++  W+ N   I THN ++ +  HGYTL  N 
Sbjct: 23  TSNEWELW----KATYGKSYLTLEEEKYRRDTWEENSLLIKTHNTDSDK--HGYTLEMNS 76

Query: 62  LSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL---IPDHLDWREKGFITPDWNQED 118
             DL       E + L ++  R+ L  S     S L   +P  LDWR+K  +T   NQ  
Sbjct: 77  FGDLTS----AEFSSL-YNGYRQNLETSGSVFSSSLRNAMPSSLDWRDKKVVTDVKNQGK 131

Query: 119 CGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAG 178
           CG+C+AFS   +++G     T  +  LS QQ++DCS+  GN GC GG++R+   Y++ AG
Sbjct: 132 CGSCWAFSTTGSLEGLHALKTGHLVSLSEQQLMDCSVKYGNNGCDGGNMRSAFQYIKDAG 191

Query: 179 GLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASP 238
           G   EE YPY  K   C+F    +      +  +P  DE +L   L  VGPI+V+++A  
Sbjct: 192 GDDTEESYPYTAKNESCRFDPKKVGATDEGYVRIPSGDEVSLMHALYEVGPISVAMDAGL 251

Query: 239 HTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKR 293
            TFQ Y  GIY D  C++ ++NH + L+GY  +S     W++KN W   WG +GY  L R
Sbjct: 252 KTFQFYKKGIYSDYLCSNTHLNHGVTLIGYGESSDGSPYWLVKNSWGKDWGIDGYFMLAR 311

Query: 294 -GNNRCGIANYAVYALI 309
              N CG+A  A Y ++
Sbjct: 312 YVGNMCGVATDASYPIL 328


>gi|195124431|ref|XP_002006696.1| GI21205 [Drosophila mojavensis]
 gi|193911764|gb|EDW10631.1| GI21205 [Drosophila mojavensis]
          Length = 339

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 166/307 (54%), Gaps = 13/307 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++K Y+ +  +  +   +  N  KI  HNQ    G   + +  N  +D+    + + M 
Sbjct: 33  EHRKTYQDETEERFRLKIFNENKHKIAKHNQRYATGEVTFKMAVNKYADMLHHEFRETMN 92

Query: 76  RLTHSRIRRTLVRSPE-------SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
              ++  +      P        S   V +P  +DWREKG +T   +Q  CG+C+AFS  
Sbjct: 93  GFNYTLHKELRASDPSFTGITFISPAHVKLPKSVDWREKGAVTAVKDQGHCGSCWAFSST 152

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++GQ F+ T  +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YPY
Sbjct: 153 GALEGQHFRKTGTLVSLSEQNLVDCSAKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPY 212

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +G    C F + ++      ++ +P  +E  +   +AT+GP++V+I+AS  +FQ Y+ GI
Sbjct: 213 EGIDDSCHFNKDSVGATDRGFADIPQGNEKKMAEAVATIGPVSVAIDASHESFQFYSEGI 272

Query: 249 YDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           Y++  C S  ++H +L+VGY      ++ W++KN W   WGD G++ + R  +N+CGIA+
Sbjct: 273 YNEPECNSQNLDHGVLVVGYGTDESGKDYWLVKNSWGTTWGDKGFIKMARNEDNQCGIAS 332

Query: 303 YAVYALI 309
            + Y L+
Sbjct: 333 ASSYPLV 339


>gi|179959|gb|AAA35655.1| cathepsin [Homo sapiens]
 gi|248406|gb|AAB22005.1| cathepsin S [Homo sapiens]
          Length = 331

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 166/303 (54%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
            + L   S+ +R +    +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  TSSLRVPSQWQRNITY--KSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 150 AQLKLKTGKLVTLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP++V ++A   +F LY SG+Y +
Sbjct: 210 DQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYE 269

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W H++G+ GY+ + R   N CGIA++  Y
Sbjct: 270 PSCTQN-VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSY 328

Query: 307 ALI 309
             I
Sbjct: 329 PEI 331


>gi|320169652|gb|EFW46551.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 325

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 159/301 (52%), Gaps = 11/301 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM-- 74
           + + Y     ++ ++  + SN + I+ HN     G H YTL  N   DL    +  +   
Sbjct: 28  HNRQYASAQEEALRQEIYLSNLELINEHNA---AGRHSYTLGMNEFGDLAHHEFAAKYLG 84

Query: 75  TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            R       ++   S      V +PD +DWR  G +TP  NQ  CG+C++FS   +++GQ
Sbjct: 85  VRFNGVNATKSFASSTYLPRMVSLPDSVDWRTAGIVTPVKNQGQCGSCWSFSTTGSVEGQ 144

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
             + T  +  LS Q +VDCS   GN GC GG + +   Y+   GG+  E  YPY      
Sbjct: 145 HARKTGTLVSLSEQNLVDCSSQEGNEGCNGGLMDDAFEYIIKNGGIDTEASYPYTATTGT 204

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           CKF   NI   ++S+  +    E  L+  +ATVGP++V+I+AS   FQ Y +G+Y+++ C
Sbjct: 205 CKFNAANIGATVASYQDIITGSESDLQNAVATVGPVSVAIDASHINFQFYFTGVYNEKKC 264

Query: 255 TSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYAL 308
           ++  ++H +L VGY  ++     W++KN W   WG  GY+++ R  +N+CGIA  A Y L
Sbjct: 265 STTQLDHGVLAVGYGTSTEGKDYWLVKNSWGATWGKAGYIWMSRNADNQCGIATSASYPL 324

Query: 309 I 309
           +
Sbjct: 325 V 325


>gi|84660244|emb|CAI43319.1| silicatein alpha [Lubomirskia baicalensis]
 gi|85677148|emb|CAI46306.1| silicatein alpha [Lubomirskia baicalensis]
 gi|220675708|emb|CAP69653.1| silcatein [Lubomirskia baicalensis]
          Length = 326

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 163/297 (54%), Gaps = 9/297 (3%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE-MTRL 77
           K Y  +  + ++   W SN K +  HN  A     GYTL  NHL DL    Y+++ +T  
Sbjct: 33  KRYASELEELERHAIWLSNKKYVEEHNARADA--FGYTLAMNHLGDLSAEEYVEQYLTNA 90

Query: 78  THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFK 137
             S   R + ++  + + V   + +DWR KG +T    Q  CGA YAF+   A++G    
Sbjct: 91  RGSNEHREM-KAFLAPKGVQYAESIDWRTKGAVTSVKYQGQCGASYAFAATGALEGASAL 149

Query: 138 STSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKF 197
           +  +   LS Q ++DCS+  GN GC+GG       YV   GG+  E  Y +KGKQS C++
Sbjct: 150 ANDKQVTLSEQNIIDCSVPYGNHGCSGGDTYTAFKYVIDNGGIDTESSYSFKGKQSSCQY 209

Query: 198 KRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSD 257
                    +    +    E  L   +ATVGP+AV+++A+ + F+ Y SG++D  +C+S 
Sbjct: 210 NNKTSGASATGVVSIGYGSESDLLAAVATVGPVAVAVDANTNAFRFYQSGVFDSSSCSST 269

Query: 258 YVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
            +NHAML+ GY     ++ W++KN WS +WGD+GY+ + R   N+CGIA+ A+Y ++
Sbjct: 270 KLNHAMLVTGYGSYNGKDYWLVKNSWSKNWGDSGYILMVRNKYNQCGIASDALYPML 326


>gi|354502589|ref|XP_003513366.1| PREDICTED: testin-2-like [Cricetulus griseus]
          Length = 333

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 170/305 (55%), Gaps = 13/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y +   + ++ + W+ N K I  HN E  QG H +T+  N   DL+   + K 
Sbjct: 33  KTKHGKTYDENEENLRRAV-WEKNFKMIELHNWEYLQGKHDFTMAMNAFGDLNNTEFRKT 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           M      RI+R   R  + +  + +P  ++WRE+G++TP  +Q  C + +AFS   A++G
Sbjct: 92  MAGFRRQRIKRR--RIFQDHLFLSVPKQVNWREQGYVTPVKSQGHCASSWAFSATGALEG 149

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+FK T ++  LS Q ++DC   +    C+GG +++   YV+  GGL  EE YPY+G   
Sbjct: 150 QMFKKTRKLNALSEQNLLDCMEFNVTRSCSGGFMQSAFQYVRDNGGLATEESYPYQGHAM 209

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+++  N   ++  +  +P  +E AL   +A VGPI+V+I+A   +FQ Y SGIY +  
Sbjct: 210 ECRYQAKNSAANVKDFVQIPGHEE-ALMKAVANVGPISVAIDARHSSFQFYESGIYYEPK 268

Query: 254 CTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           C   + NHA+L+VGY          + W++KN W   WG  GYM + +  NN CGIA +A
Sbjct: 269 CKRVHQNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGIKGYMKIAKDWNNHCGIATHA 328

Query: 305 VYALI 309
            Y ++
Sbjct: 329 TYPIV 333


>gi|1834307|dbj|BAA09820.1| cysteine proteinase [Spirometra erinaceieuropaei]
 gi|1834309|dbj|BAA09821.1| cysteine proteinase [Spirometra erinaceieuropaei]
          Length = 336

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 167/301 (55%), Gaps = 11/301 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE--- 73
           +KK+Y     +  +K  + +N   I  HNQ   Q L  Y +R N  SDL P  + +    
Sbjct: 39  FKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAVRLNDFSDLTPGEFAERYLC 98

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           +  +  +++RR    S    E+  +PD ++WRE+G +T   NQ  CG+C++FS   AI+G
Sbjct: 99  LRGIVLTKLRRKEAVSVPLKEN--LPDSVNWRERGAVTSVKNQGQCGSCWSFSANGAIEG 156

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
            I   T  +  LS QQ++DCS   GN GC GG +     Y Q   G+  E DY Y  +  
Sbjct: 157 AIQIKTGALRSLSEQQLMDCSWDYGNQGCNGGLMPQAFQYAQRY-GVEAEVDYRYTERDG 215

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
           +C++++  +V +++ ++ LP  DE  L+  +AT+GPI+V I+A+   F  Y+ G++  + 
Sbjct: 216 VCRYRQDLVVANVTGYAELPEGDEGGLQRAVATIGPISVGIDAADPGFMSYSHGVFVSKT 275

Query: 254 CTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           C+   ++H +L+VGY   +    W++KN W   WG++GY+ + R  NN CGIA+ A Y  
Sbjct: 276 CSPYAIDHGVLVVGYGAENGDAYWLVKNSWGSSWGEDGYLKMARNRNNMCGIASMASYPT 335

Query: 309 I 309
           +
Sbjct: 336 V 336


>gi|208972996|dbj|BAG74347.1| silicatein-G2 [Ephydatia fluviatilis]
          Length = 326

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ + K Y     +  +   W +N ++I  HN EA+   HG+TL  N  SDL    + + 
Sbjct: 28  KETHGKAYSTTDEEQNRLSVWLANKRRIDHHNVEAEN--HGFTLAMNSFSDLTDEEFAER 85

Query: 74  MTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
              L H +   TL R    E+ + V   D +DWR KG +    NQ  CGA YAF+  +++
Sbjct: 86  F--LNHQQGNYTLRRVAMFEAPQGVKYADSVDWRTKGAVNSVKNQGQCGASYAFAAVASL 143

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +G    +  ++  LS Q V+DCS+   N GC GG     L YV   GG+  E  Y YK +
Sbjct: 144 EGMNALANEKMVALSEQNVIDCSVPYSNRGCNGGDTYAALKYVVDNGGIDTESTYAYKER 203

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           QS C+F    I    S    +    E  L   +AT+GP+AV+++A+ + F+ Y SGI+  
Sbjct: 204 QSSCQFNSKYIGATASGVVAISSSSESELMAAVATMGPVAVAVDANTYAFRYYQSGIFSS 263

Query: 252 EACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            AC+S  +NHAM++ GY  +S    W++KN W  +WG+ GY+ + R   N+CGIA+ A++
Sbjct: 264 SACSSTKLNHAMVVTGYGTSSGKDYWLVKNSWGSNWGNGGYIMMARNKYNQCGIASDALF 323


>gi|11055|emb|CAA45129.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 320

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 169/302 (55%), Gaps = 12/302 (3%)

Query: 17  YKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK 72
           +K  Y +K  D+K++L+    +Q N + I   N++ + G   + +  N   D+    +  
Sbjct: 22  FKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNA 81

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
            M    + +  R   ++  + E+  +   +DWR K  +TP  +QE CG+C+AFS   A++
Sbjct: 82  VMK--GYKKGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALE 139

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F    E+  LS QQ+VDCS   GN GC GG + +  +Y++  GG+  E  YPY+ + 
Sbjct: 140 GQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAED 199

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C+F   N +  I + SV     E AL+  ++ VGPI+V+I+AS  +FQ Y+SG+Y ++
Sbjct: 200 RSCRFD-ANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQ 258

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            C+  +++H +L VGY    T++ W++KN W   WGD GY+ + R  +N CGIA+   Y 
Sbjct: 259 NCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYP 318

Query: 308 LI 309
            +
Sbjct: 319 TV 320


>gi|28932706|gb|AAO60047.1| midgut cysteine proteinase 4 [Rhipicephalus appendiculatus]
          Length = 345

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 167/301 (55%), Gaps = 18/301 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKK----IHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           K++K Y K    S++ ++ +   ++    + T +++ + G   Y++  NH +D+ P   +
Sbjct: 40  KFRKIYNKTYGTSEETVYREQVFRRTFNFLRTVDEKFKNGTLLYSVAVNHFADMTPDEVV 99

Query: 72  KEMTRL---THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
              T     +  ++    + +P   ++   P+ ++WRE GF+TP  NQ  CG+C+AFS  
Sbjct: 100 ANYTGYKPPSAQQLAEIPLYAPLFGDT---PEFIEWRENGFVTPVKNQGQCGSCWAFSST 156

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
            A++GQ+FK T  +  LS Q ++DC+    GN GC GG +     YVQ AGGL  E  YP
Sbjct: 157 GALEGQVFKRTRRLISLSEQNLMDCAGQRYGNNGCNGGQMPGAFQYVQDAGGLDTEARYP 216

Query: 188 YK-GKQSICKFKRPNIV--VDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
           Y+ G    C+F        V ++  + +PP++E  L+  +A VGPI+++INASP TF  Y
Sbjct: 217 YRQGTNFQCQFSNSFEARRVSVNGHTRVPPRNERVLQDAVANVGPISIAINASPQTFMFY 276

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGI 300
            +GIY +  C    +NHA+LLVGY        WI+KN W   WG+ GY+ + R  N CG+
Sbjct: 277 KNGIYGEPNCDPRGLNHAVLLVGYGEERGVPYWIVKNSWGPGWGEGGYIKILRNRNVCGM 336

Query: 301 A 301
           +
Sbjct: 337 S 337


>gi|118125|sp|P25784.1|CYSP3_HOMAM RecName: Full=Digestive cysteine proteinase 3; Flags: Precursor
          Length = 321

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 169/302 (55%), Gaps = 12/302 (3%)

Query: 17  YKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK 72
           +K  Y +K  D+K++L+    +Q N + I   N++ + G   + +  N   D+    +  
Sbjct: 23  FKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNA 82

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
            M    + +  R   ++  + E+  +   +DWR K  +TP  +QE CG+C+AFS   A++
Sbjct: 83  VMK--GYKKGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALE 140

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F    E+  LS QQ+VDCS   GN GC GG + +  +Y++  GG+  E  YPY+ + 
Sbjct: 141 GQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAED 200

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C+F   N +  I + SV     E AL+  ++ VGPI+V+I+AS  +FQ Y+SG+Y ++
Sbjct: 201 RSCRFD-ANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQ 259

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            C+  +++H +L VGY    T++ W++KN W   WGD GY+ + R  +N CGIA+   Y 
Sbjct: 260 NCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYP 319

Query: 308 LI 309
            +
Sbjct: 320 TV 321


>gi|198432215|ref|XP_002130162.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 331

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/306 (35%), Positives = 170/306 (55%), Gaps = 18/306 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           Y K YR +  + K++  W  N K +  HN EA +G H Y +  N  +DL    + + MT 
Sbjct: 31  YGKVYRAEE-ELKRQYIWLENLKYVTQHNLEADEGKHTYKVDTNQFADLSNDEWRELMT- 88

Query: 77  LTHSRIRRTLVRSPESN-------ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
              S++ R   +    N       + V+ P ++DWR++G++TP  +Q+ CG+C+AFS   
Sbjct: 89  ---SQVTRPTNQMSFCNMTFMTVGDHVIAPKNVDWRKEGYVTPVKDQKQCGSCWAFSTTG 145

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           +++GQ FK T ++  LS Q +VDCS+  GN GC GG +     Y+   GG+  E  YPY 
Sbjct: 146 SLEGQHFKKTGKLVSLSEQNLVDCSMKEGNHGCQGGLMDLGFEYIFDNGGIDTESSYPYM 205

Query: 190 GK-QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            K +  C +KR N    ++    +    E AL   +A VGPI+V+I+A   +FQ+Y SG+
Sbjct: 206 AKNEPQCMYKRSNSGATLTGCVDIKRGSESALMKAVADVGPISVAIDAGHKSFQMYKSGV 265

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           Y + +C+S  ++H +L VG+  ++    W++KN W   WG  GY+ + R  +N CGIA  
Sbjct: 266 YYEPSCSSVKLDHGVLAVGFGADNGEDFWLVKNSWGPIWGMEGYIMMSRNRDNNCGIATQ 325

Query: 304 AVYALI 309
           A Y L+
Sbjct: 326 ASYPLV 331


>gi|2804262|dbj|BAA24442.1| cysteine proteinase [Sitophilus zeamais]
          Length = 338

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 170/308 (55%), Gaps = 16/308 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           ++ K+Y  +  +  +   +  N  K+  HN+   QG   + L  N  +D+    ++  + 
Sbjct: 33  QHSKNYDSETEERFRMKIFMENAHKVAKHNKLFSQGFVKFKLGLNKYADMLHHEFVSTLN 92

Query: 76  RLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDWNQEDCGACYAFSI 127
               ++ +  +++  + N++V         +PD +DWR+KG +T   +Q  CG+C++FS 
Sbjct: 93  GF--NKTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTEVKDQGHCGSCWSFSA 150

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             +++GQ F+ T ++  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 151 TGSLEGQHFRKTGKLVSLSEQNLVDCSGRYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYP 210

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y  +   C +K  N       +  +   +E  LK  +ATVGP++++I+AS  TFQLY+ G
Sbjct: 211 YLAEDEKCHYKAQNSGATDKGFVDIEEANEDDLKAAVATVGPVSIAIDASHETFQLYSDG 270

Query: 248 IYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           +Y D  C+S  ++H +L+VGY      ++ W++KN W   WG NGY+ + R  +N CG+A
Sbjct: 271 VYSDPECSSQELDHGVLVVGYGTSDDGQDYWLVKNSWGPSWGLNGYIKMARNQDNMCGVA 330

Query: 302 NYAVYALI 309
           + A Y L+
Sbjct: 331 SQASYPLV 338


>gi|17062058|gb|AAL34984.1|AF320565_1 cathepsine L-like cysteine protease [Rhodnius prolixus]
          Length = 316

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 173/313 (55%), Gaps = 14/313 (4%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW+      +  + K+YR +  +  +   +  N KKI  HN + + G   Y ++ NHL 
Sbjct: 11  QEWLAF----KAMHGKNYRNQFEEIFRMKVFIDNKKKIDEHNAKYELGEASYKMKMNHLG 66

Query: 64  DLHPRHYIKEMT--RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGA 121
           DL    +   M   + T +  R   +  P SNE+  +P  +DWR++G +TP  +Q  CG+
Sbjct: 67  DLMVHEFKALMNGFKKTPNAERNGKIYVP-SNEN--LPKSVDWRQRGAVTPVKDQGHCGS 123

Query: 122 CYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLM 181
           C++FS   +++GQ+F  T  +  LS Q +VDCS   GN GC GG +     YV+   G+ 
Sbjct: 124 CWSFSATGSLEGQLFLKTGRLVSLSEQNLVDCSKTYGNSGCEGGLMNQAFQYVRDNKGID 183

Query: 182 KEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTF 241
            E  YPY+ +++ C+FK   +      +  +    E  L+  +ATVGPI+V I+AS  +F
Sbjct: 184 TEASYPYEARENNCRFKEDKVGGTDKGYVDILEASEKDLQSAVATVGPISVRIDASHESF 243

Query: 242 QLYASGIYDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRGN-N 296
           Q Y+ G+Y ++ C+   ++H +L VGY T N    W++KN W   WG++GY+ + R + N
Sbjct: 244 QFYSEGVYKEQYCSPSQLDHGVLTVGYGTENGQDYWLVKNSWGPSWGESGYIKIARNHKN 303

Query: 297 RCGIANYAVYALI 309
            CGIA+ A Y ++
Sbjct: 304 HCGIASMASYPVV 316


>gi|21245114|ref|NP_640355.1| cathepsin Q precursor [Rattus norvegicus]
 gi|12585197|sp|Q9QZE3.1|CATQ_RAT RecName: Full=Cathepsin Q; Flags: Precursor
 gi|6010771|gb|AAF01247.1|AF187323_1 cathepsin Q [Rattus norvegicus]
 gi|149039733|gb|EDL93849.1| rCG24173 [Rattus norvegicus]
          Length = 343

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 166/312 (53%), Gaps = 21/312 (6%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY---IK 72
           KY+K Y  +  +  K++ W+ N KKI  HN+E   G + YT+  N  +D+    +   I 
Sbjct: 35  KYEKLYSPEE-EVLKRVVWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMII 93

Query: 73  EMTRLTHSRIRRTLVRS-----PES-NESVLIPDHLDWREKGFITPDWNQEDCGACYAFS 126
                 H+  +R   R+     P S N    +P  +DWR +G++T    Q  C +C+AF 
Sbjct: 94  GFQLPVHNTEKRLWKRALGSFFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFP 153

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
           +  AI+GQ+FK T ++  LS+Q ++DCS   GN GC  G+  N   YV   GGL  E  Y
Sbjct: 154 VTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATY 213

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY+ K+ +C++   N    I+ + VL P+ E  L   +AT GPIA  ++    +F+ Y  
Sbjct: 214 PYERKEGVCRYNPKNSSAKITGFVVL-PESEDVLMDAVATKGPIATGVHVISSSFRFYQK 272

Query: 247 GIYDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNR 297
           G+Y +  C+S YVNHA+L+VGY          N W++KN W   WG  GYM + K  NN 
Sbjct: 273 GVYHEPKCSS-YVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMKIAKDRNNH 331

Query: 298 CGIANYAVYALI 309
           C IA+ A Y  +
Sbjct: 332 CAIASLAQYPTV 343


>gi|344271939|ref|XP_003407794.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 335

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/307 (35%), Positives = 166/307 (54%), Gaps = 15/307 (4%)

Query: 16  KYKKDYRKKATDSKKKLH---WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK 72
           ++K  Y+K    +++ L    W+ N K I  HNQE  QG HG+T+  N   D     + +
Sbjct: 31  QWKSTYKKVYAANEEGLTRAVWEKNMKMIERHNQEHSQGKHGFTMAMNAFGDKTNEEFRQ 90

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
            M      + ++  +          IP  ++W ++G++TP  +Q  C +C+AFS   A++
Sbjct: 91  LMNGFQSQKHKKGKLFHFHEPVFGHIPTSVNWTQRGYVTPVKDQGSCHSCWAFSATGALE 150

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ+F+ T ++  LS Q +VDCS    N GC+GG +     YV+  GGL  EE YPY  K+
Sbjct: 151 GQMFRKTGKLVSLSEQNLVDCSRPESNNGCSGGLMDKAFQYVKNNGGLDSEESYPYTAKE 210

Query: 193 SI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           S  C +K      + + +  +PPQ E AL   +A+VGPI+V+++AS  +F+ Y SGIY D
Sbjct: 211 SRNCLYKPEFSAANNTGFVNIPPQ-EKALMNAVASVGPISVAVDASLKSFRFYKSGIYFD 269

Query: 252 EACTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYL-KRGNNRCGIAN 302
            AC    VNH +L+VGY            W++KN W   WG +GY+ + K  NN CGIA 
Sbjct: 270 PACRLA-VNHGVLVVGYGFEGTDPDKNKYWLVKNSWGKSWGADGYIKIAKDRNNHCGIAR 328

Query: 303 YAVYALI 309
            A Y  +
Sbjct: 329 AASYPTV 335


>gi|163658591|gb|ABY28387.1| cathepsin L [Gnathostoma spinigerum]
          Length = 398

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 162/288 (56%), Gaps = 16/288 (5%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY-----IKEMTRLTHSRIRRTLVR 88
           +  N + I  HN++ Q+G   + +  NHL+DL    Y      ++    +  R   T +R
Sbjct: 115 FTKNLEYIKQHNEKFQRGEVTFEMGVNHLTDLPFDEYKKLNGFRKNNDDSRPRNGSTFLR 174

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
                  V IPD +DWR   ++T   +Q  CG+C+AFS   A++GQ  + T ++  LS Q
Sbjct: 175 P----HFVQIPDTVDWRNSSYVTVVKDQGQCGSCWAFSATGALEGQHMRKTHQLVSLSEQ 230

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-ICKFKRPNIVVDIS 207
            +VDCS   GN GC GG + N   Y++   G+  EE YPYKG +   C F+R  +  +  
Sbjct: 231 NLVDCSRKYGNNGCNGGLMDNAFEYIKDNHGIDTEESYPYKGVEGKKCHFRRKFVGAEDY 290

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
            ++ LP  DE ALKV +AT+GPI+V+I+A   +FQ Y  GIY +  C+ + ++H +L+VG
Sbjct: 291 GYTDLPEGDEEALKVAVATIGPISVAIDAGHISFQNYRKGIYTENECSPEDLDHGVLVVG 350

Query: 268 YTRNS-----WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
           Y  +      WI+KN W   WG++GY+ + R   N+CGIA+ A Y ++
Sbjct: 351 YGTDENAGDYWIVKNSWGTRWGEHGYIRMARNKRNQCGIASKASYPIV 398


>gi|52345644|ref|NP_001004869.1| cathepsin L2 precursor [Xenopus (Silurana) tropicalis]
 gi|49522051|gb|AAH74718.1| MGC69486 protein [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/310 (35%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y  K    ++ L W+ N + I  HN E   G H ++L  N   D+    + + M  
Sbjct: 36  HKKSYAPKEEGWRRVL-WEKNLRMIEFHNLEHSLGKHSHSLGMNQFGDMTNEEFRQLMNG 94

Query: 77  L-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
                +IR +   +P + ES   P  +DWR+KG++TP  +Q  CG+C+AFS   A++GQ 
Sbjct: 95  YKNQKKIRGSTFLAPNNFES---PKSVDWRKKGYVTPVKDQGQCGSCWAFSTTGALEGQH 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           +++T ++  LS Q +VDCS   GN GC GG +     YV+  GG+  E+ YPY  K    
Sbjct: 152 YRNTGKMISLSEQNLVDCSRAQGNQGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDDQE 211

Query: 196 KFKRPNI-------VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
               PN         VD++S S      E  L   +A+VGP++V+++A   +FQ Y SGI
Sbjct: 212 CHYDPNYNSANDTGFVDVTSGS------EKDLMNAVASVGPVSVAVDAGHQSFQFYKSGI 265

Query: 249 YDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCG 299
           Y +  C+S+ ++H +L+VGY         +  WI+KN WS  WG++GY+Y+ K  +N CG
Sbjct: 266 YYEPECSSEDLDHGVLVVGYGFEGEDEDGKKYWIVKNSWSEKWGNDGYIYIAKDRHNHCG 325

Query: 300 IANYAVYALI 309
           IA  A Y L+
Sbjct: 326 IATAASYPLV 335


>gi|89272015|emb|CAJ83143.1| cathepsin L2 [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y  K    ++ L W+ N + I  HN E   G H ++L  N   D+    + + M  
Sbjct: 36  HKKSYAPKEEGWRRVL-WEKNLRMIEFHNLEHSLGKHSHSLGMNQFGDMTNEEFRQLMNG 94

Query: 77  L-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
                +IR +   +P + ES   P  +DWR+KG++TP  +Q  CG+C+AFS   A++GQ 
Sbjct: 95  YKNQKKIRGSTFLAPNNFES---PKSVDWRKKGYVTPVKDQGQCGSCWAFSTTGALEGQH 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           +++T ++  LS Q +VDCS   GN GC GG +     YV+  GG+  E+ YPY  K    
Sbjct: 152 YRNTGKMISLSEQNLVDCSRAQGNQGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDDQE 211

Query: 196 KFKRPNI-------VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
               PN         VD++S      + E  L   +A+VGP++V+++A   +FQ Y SGI
Sbjct: 212 CHYDPNYNSANDTGFVDVTS------ESEKDLMNAVASVGPVSVAVDAGHQSFQFYKSGI 265

Query: 249 YDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCG 299
           Y +  C+S+ ++H +L+VGY         +  WI+KN WS  WG++GY+Y+ K  +N CG
Sbjct: 266 YYEPECSSEDLDHGVLVVGYGFEGEDEDGKKYWIVKNSWSEKWGNDGYIYIAKDRHNHCG 325

Query: 300 IANYAVYALI 309
           IA  A Y L+
Sbjct: 326 IATAASYPLV 335


>gi|346574373|gb|AEO36958.1| silicatein-alpha 1 [Baikalospongia fungiformis]
          Length = 324

 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 162/297 (54%), Gaps = 9/297 (3%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE-MTRL 77
           K Y  +  + ++   W SN K +  HN  A     GYTL  NHL DL    Y ++ +T  
Sbjct: 31  KRYASELEELERHAIWLSNKKYVEEHNARADA--FGYTLAMNHLGDLSAEEYAEQYLTNA 88

Query: 78  THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFK 137
             S   R + ++  + + V   + +DWR KG +T    Q  CGA YAF+   A++G    
Sbjct: 89  RGSNEHREM-KAFLAPKGVQYAESIDWRTKGAVTSFQYQGQCGASYAFAATGALEGASAL 147

Query: 138 STSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKF 197
           +  +   LS Q ++DCS+  GN GC+GG       YV   GG+  E  Y +KGKQS C++
Sbjct: 148 ANDKQVTLSEQNIIDCSVPYGNHGCSGGDTYTAFKYVIDNGGIDTESSYSFKGKQSSCQY 207

Query: 198 KRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSD 257
                    +    +    E  L   +ATVGP+AV+++A+ + F+ Y SG++D  +C+S 
Sbjct: 208 NNKTSGASATGVVSIGYGSESDLLAAVATVGPVAVAVDANTNAFRFYQSGVFDSSSCSST 267

Query: 258 YVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
            +NHAML+ GY     ++ W++KN WS +WGD+GY+ + R   N+CGIA+ A+Y ++
Sbjct: 268 KLNHAMLVTGYGSYNGKDYWLIKNSWSKNWGDSGYILMVRNKYNQCGIASDALYPML 324


>gi|15128493|dbj|BAB62718.1| plerocercoid growth factor/cysteine protease [Spirometra
           erinaceieuropaei]
 gi|15130639|dbj|BAB62799.1| plerocercoid growth factor-2/cysteine protease [Spirometra
           erinaceieuropaei]
          Length = 336

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 166/301 (55%), Gaps = 11/301 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE--- 73
           +KK+Y     +  +K  + +N   I  HNQ   Q L  Y +R N  SDL P  + +    
Sbjct: 39  FKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAVRLNDFSDLTPGEFAERYLC 98

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           +  +  +++RR    S    E+  +PD ++WRE+G +T   NQ  CG+C++FS   AI+G
Sbjct: 99  LRGIVLTKLRRKEAVSVPLKEN--LPDSVNWRERGAVTSVKNQGQCGSCWSFSANGAIEG 156

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
            I   T  +  LS QQ++DCS   GN GC GG +     Y Q   G+  E DY Y  +  
Sbjct: 157 AIQIKTGALRSLSEQQLMDCSWDYGNQGCNGGLMPQAFQYAQRY-GVEAEVDYRYTERDG 215

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
           +C++++  +V +++ ++ LP  DE  L+  +AT+GPI+V I+A+   F  Y+ G++  + 
Sbjct: 216 VCRYRQDLVVANVTGYAELPEGDEGGLQRAVATIGPISVGIDAADPGFMSYSHGVFVSKT 275

Query: 254 CTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           C+   ++H +L+VGY   +    W++KN W   WG+ GY+ + R  NN CGIA+ A Y  
Sbjct: 276 CSPYAIDHGVLVVGYGAENGEAYWLVKNSWGSSWGEGGYVKMARNRNNMCGIASMASYPT 335

Query: 309 I 309
           +
Sbjct: 336 V 336


>gi|301609084|ref|XP_002934126.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 340

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 16/305 (5%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           K ++K Y+    +  ++  W+   K I  HN E   GLH Y +  NHL D+        M
Sbjct: 35  KTHQKTYKDTEEERTRRTIWEETLKFISVHNLEYSLGLHTYEVGMNHLGDMTGEEVAATM 94

Query: 75  TRLT---HSRIRRTLVRSPESNE--SVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           T  T   HS    + VR    NE      P  +DWR +  +TP  +Q  C +CYAFS   
Sbjct: 95  TCYTSSDHSLANMSHVR----NEILEAQPPASIDWRTQNCVTPVRHQGKCCSCYAFSTVG 150

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++ Q  K TS++   S Q++VDCS   GN GC  G L  +  Y++   G+M+E  YPY 
Sbjct: 151 ALECQWKKKTSKLVTFSPQELVDCSESEGNKGCKWGYLSKSFEYMK-KYGVMEESAYPYT 209

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           GK+  CK K+P+    ++ +  L   +E ALK  + T+GP++V+I+AS   F++Y SG+Y
Sbjct: 210 GKEGQCKRKKPSNTGVVNQFYRLHAGNETALKNVVGTIGPVSVAIDASRQGFRMYKSGVY 269

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
            D  CT++ VNHA+L+VGY  ++    W +KN W   +GD GY+ + R   N CGIA  A
Sbjct: 270 YDPCCTTE-VNHAVLVVGYGTDNGKAYWRVKNSWGIGFGDKGYIKMARNRKNHCGIAKEA 328

Query: 305 VYALI 309
           VY ++
Sbjct: 329 VYPIL 333


>gi|156399477|ref|XP_001638528.1| predicted protein [Nematostella vectensis]
 gi|156225649|gb|EDO46465.1| predicted protein [Nematostella vectensis]
          Length = 325

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 105/297 (35%), Positives = 162/297 (54%), Gaps = 13/297 (4%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE-MTRL 77
           K Y  +  D ++ + W  N + +  HN E     H Y L  NH +DL    + +  M   
Sbjct: 36  KTYTGEEEDLRRAI-WNDNLEIVKKHNAEN----HSYKLDMNHFADLTVTEFKQRFMGYR 90

Query: 78  THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFK 137
             S         P SN  V +P  +DWR+KGF+T   NQ  CG+C+AFS   +++GQ F+
Sbjct: 91  AASNSTGGSTFLPLSN--VQLPAEVDWRDKGFVTAVKNQGQCGSCWAFSSTGSLEGQHFR 148

Query: 138 STSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKF 197
            T ++  LS Q +VDCS   GN GC GG +     Y++   G+  E+ YPY  +   C F
Sbjct: 149 KTGKLVSLSEQNLVDCSKKYGNNGCEGGLMDYAFKYIKNNDGIDTEQSYPYTARDGQCHF 208

Query: 198 KRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSD 257
           K  ++   ++ ++ +    E  L+  +ATVGPI+V+I+A   +FQLY +G+Y +  C+S 
Sbjct: 209 KPGSVGATVTGYTDVQRGSEGDLQSAVATVGPISVAIDAGHSSFQLYKTGVYSEPDCSST 268

Query: 258 YVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
            ++H +L VGY     ++ W++KN W   WG NGY+ + R  +N+CGIA  A Y L+
Sbjct: 269 QLDHGVLAVGYGAEDGKDYWLVKNSWGEGWGMNGYIKMSRNKDNQCGIATQASYPLV 325


>gi|119389039|pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human
           Procathepsin S
          Length = 315

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 166/303 (54%), Gaps = 10/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 16  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 75

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +    +SN + ++PD +DWREKG +T    Q  CGA +AFS   A++
Sbjct: 76  MSSLRVPSQWQRNITY--KSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALE 133

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 134 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM 193

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++ LP   E  LK  +A  GP++V ++A   +F LY SG+Y +
Sbjct: 194 DQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYE 253

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W H++G+ GY+ + R   N CGIA++  Y
Sbjct: 254 PSCTQN-VNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSY 312

Query: 307 ALI 309
             I
Sbjct: 313 PEI 315


>gi|94448670|emb|CAI91573.1| silicatein a4 [Lubomirskia baicalensis]
 gi|312386085|gb|ADQ74587.1| silicatein alpha 4 [Lubomirskia baicalensis]
          Length = 326

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 162/303 (53%), Gaps = 17/303 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + +++K Y     + ++   W SN K I  HN  +     GYTL  NH  DL    Y   
Sbjct: 28  KGQHQKSYMSGLEELERHSIWLSNKKYIEEHNAHSDD--FGYTLAMNHFGDLSTEEY--N 83

Query: 74  MTRLTH-----SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
              LTH     +   R   R+P+  + V   D +DWR KG +T    Q  CGA YAF+  
Sbjct: 84  AMYLTHDPGNYTHHGRKAFRTPKGVQYV---DSIDWRTKGAVTSVKYQGQCGASYAFAAT 140

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++G    S  +   LS Q ++DCS+  GN GC+GG     + YV   GG+  E  Y +
Sbjct: 141 GALEGASALSNDKQVILSEQNIIDCSVPYGNHGCSGGDTYTAMKYVIDNGGIDTESSYSF 200

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +GKQS C++   N     +    +    E  L   +ATVGP+AV+++A+ + F+ Y SG+
Sbjct: 201 QGKQSSCQYSSKNSGASATGVISIASGSETDLFAAVATVGPVAVAVDANTNAFRFYQSGV 260

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANY 303
           +D  +C++  +NHAML+ GY     ++ W++KN WS +WGDNGY+ + R   N+CGIA  
Sbjct: 261 FDSSSCSNTKLNHAMLVTGYGSYNGKDYWLVKNSWSKNWGDNGYIMMVRNKYNQCGIATD 320

Query: 304 AVY 306
           A+Y
Sbjct: 321 ALY 323


>gi|195123821|ref|XP_002006400.1| GI18587 [Drosophila mojavensis]
 gi|193911468|gb|EDW10335.1| GI18587 [Drosophila mojavensis]
          Length = 366

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 154/300 (51%), Gaps = 10/300 (3%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A    ++  + +    +   N   + G   Y L  N  +DL    ++K++T L 
Sbjct: 68  KTYASAADRQLRERIFGARKNLVDATNAAFKGGAKTYELAVNAFADLTKAEFLKQLTGLR 127

Query: 79  HSRIRRTLVR----SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            S       +    +P       +PD  DWREKG +TP   Q DCG+C++F+   AI+G 
Sbjct: 128 KSSSGEQNAKMHRLAPNLAAKEKLPDSFDWREKGGVTPVKFQGDCGSCWSFAATGAIEGH 187

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNL-GCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           +F+ T ++  LS Q +VDC      L GC GG      N+V+   G+     YPY  K+ 
Sbjct: 188 VFRKTGKLPNLSEQNLVDCGPRDLGLDGCDGGYQEYAFNFVKEQDGIAVGSKYPYVDKKD 247

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            CK+        I+ ++V+PP+DE A+K  +AT GP+A S+     +  LY  GIY DE 
Sbjct: 248 TCKYTSSLSGAQITGFAVIPPKDEQAMKTVIATQGPLACSVYGL-ESLLLYKRGIYADEE 306

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           C +  VNH++L+VGY     ++ WI+KN W   WG++GY  L RG N CGIA    Y ++
Sbjct: 307 CNNGEVNHSVLVVGYGSENGQDFWIVKNSWDKIWGEDGYFRLPRGKNFCGIATECSYPIV 366


>gi|426365294|ref|XP_004049712.1| PREDICTED: LOW QUALITY PROTEIN: putative cathepsin L-like protein
           6-like [Gorilla gorilla gorilla]
          Length = 333

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/281 (37%), Positives = 151/281 (53%), Gaps = 15/281 (5%)

Query: 39  KKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLI 98
           K I  HNQE  QG H +T+  N   D+    + + M    + + R+      +  E +L+
Sbjct: 58  KMIEQHNQEYSQGKHSFTMAMNAFGDMTNEEFRQVMNGFQYQKHRK----GKQFQERLLL 113

Query: 99  --PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSII 156
             P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ+F  T ++  L+ Q +VDCS  
Sbjct: 114 ESPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQVFWKTGKLISLNEQNLVDCSGP 173

Query: 157 SGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQD 216
            GN GC GG + N   YVQ   GL  E  YPY+GK   C +  P       +  V  P  
Sbjct: 174 QGNEGCNGGFMDNPFRYVQENRGLDSEASYPYEGKVKTCGYN-PKYSAANDTGFVDIPSR 232

Query: 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS---- 272
           E  L   +ATVGPI+V++ AS  +FQ Y  GIY +  C  + ++HAML+VGY+       
Sbjct: 233 EKDLAKAVATVGPISVAVGASHVSFQFYKKGIYFEPRCDPEGLDHAMLVVGYSYEGADWD 292

Query: 273 ---WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              W++KN W  +WG +GY+ + K   N CGI   A Y  +
Sbjct: 293 NKYWLVKNSWGKNWGMDGYIKMAKDRRNNCGITTAASYPTV 333


>gi|19698257|dbj|BAB86771.1| cathepsin L-like [Engraulis japonicus]
          Length = 324

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 164/303 (54%), Gaps = 11/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL-HPRHYIK 72
           + K+ K Y     ++ +K  W +NH+KI  HNQ A QG+H Y    N  SD+ H      
Sbjct: 26  KAKFGKSYPSLEEEAHRKGLWLANHQKIQAHNQLADQGVHSYRQGLNQFSDMDHEEFRQT 85

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
            +T++   +  R     P    +V +   +DWR  G ++P  NQ  CG+C++FS   A++
Sbjct: 86  VLTKMDPPKNNRG-ASEPFRAPNVGLAASVDWRTSGCVSPIKNQGQCGSCWSFSATGALE 144

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
            Q       +  LS QQ+VDCS   GN GC GG   +   YVQ  GG+  E  YPY+ + 
Sbjct: 145 SQTCLRRGYLPSLSEQQLVDCSGPYGNYGCNGGWPDHAFQYVQANGGIDSESYYPYQARV 204

Query: 193 SICKFKRPNIVVDISSW-SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
             C +         S +  V P   E AL+  +A VGP++++I+AS   +Q Y SG+++D
Sbjct: 205 GTCHYNSAYSAATCSGYQDVTPVGSESALQYYVANVGPLSIAIDAS--GWQSYQSGVFND 262

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVY 306
            +C S   +HA+LLVGY     ++ W++KN W   WG+ GY+ + R  NN+CGIAN+A Y
Sbjct: 263 PSC-SQTADHAVLLVGYGTYNGQDYWLVKNSWGTWWGEQGYIMMARNANNQCGIANHASY 321

Query: 307 ALI 309
            L+
Sbjct: 322 PLV 324


>gi|328776427|ref|XP_625135.3| PREDICTED: cathepsin L-like [Apis mellifera]
          Length = 351

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 171/321 (53%), Gaps = 16/321 (4%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + N+EW+   +  +K YK D  ++    + K+   + HK I  HN   +     Y L+ N
Sbjct: 29  LVNQEWMTFKMEHKKVYKSDVEERF---RMKIFMDNKHK-IAKHNSNYEMKKVSYKLKMN 84

Query: 61  HLSDLHPRHYIKEMTRLTHS-----RIRRTLV-RSPESNESVLIPDHLDWREKGFITPDW 114
              D+    ++  +     S     R  R  V  S     +V++P  +DWR++G +TP  
Sbjct: 85  KYGDMLHHEFVNILNGFNKSINTQLRSERLPVGASFIEPANVVLPKKVDWRKEGAVTPVK 144

Query: 115 NQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174
           +Q  CG+C++FS   A++GQ F+ T  +  LS Q ++DCS   GN GC GG +     Y+
Sbjct: 145 DQGHCGSCWSFSATGALEGQHFRRTGVLVSLSEQNLIDCSGKYGNNGCNGGLMDQAFQYI 204

Query: 175 QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
           +   GL  E  YPY+ +   C++   N       +  +P  DE  LK  +AT+GP++V+I
Sbjct: 205 KDNKGLDTEASYPYEAENDKCRYNPANSGAIDVGYIDIPTGDEKLLKAAVATIGPVSVAI 264

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM 289
           +AS  +FQ Y+ G+Y +  C+S+ ++H +L++GY  N      W++KN W   WG+NGY+
Sbjct: 265 DASHQSFQFYSEGVYYEPECSSEELDHGVLVIGYGTNENGQDYWLVKNSWGETWGNNGYI 324

Query: 290 YLKRGN-NRCGIANYAVYALI 309
            + R   N CGIA+ A Y L+
Sbjct: 325 KMARNKLNHCGIASSASYPLV 345


>gi|27532972|ref|NP_083912.2| cathepsin Q precursor [Mus musculus]
 gi|27960482|gb|AAO27845.1|AF456461_1 cathepsin Q [Mus musculus]
 gi|16445011|gb|AAK00505.1| cathepsin Q precursor [Mus musculus]
 gi|71050990|gb|AAH99415.1| Cathepsin Q [Mus musculus]
 gi|148709365|gb|EDL41311.1| cathepsin Q, isoform CRA_a [Mus musculus]
          Length = 343

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 112/324 (34%), Positives = 171/324 (52%), Gaps = 28/324 (8%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           KEW+  F   +K Y  +      +  ++  W+ N K+I  HN+E   G + YT+  N  +
Sbjct: 30  KEWMGSF---EKLYSPE-----EEVLRRAIWEENVKRIKLHNRENSLGKNTYTMGLNGFA 81

Query: 64  DLHPRHYIKEM--TRLTHSRIRRTL----VRSPESNE---SVLIPDHLDWREKGFITPDW 114
           D+    ++  +    L     R++L    + SP          +P  +DWR +G++T   
Sbjct: 82  DMTDEEFMNIVIGATLPVDNTRKSLWKRALGSPFPKSWYWKDALPKFVDWRNEGYVTRVR 141

Query: 115 NQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174
           NQ +C +C+AF +  AI+GQ+FK T ++  LS+Q +VDCS   GN GC  G+  N   YV
Sbjct: 142 NQRNCNSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLVDCSRPQGNRGCRWGNTYNGFQYV 201

Query: 175 QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
              GGL  +  YPY+GK+ +C++   N    I+ + VL P+ E  L   +AT GPIA  I
Sbjct: 202 LHNGGLEAQATYPYEGKEGLCRYNPKNSAAKITGFVVL-PESEDVLMDAVATKGPIATGI 260

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDN 286
           +    +F+ Y  G+Y +  CTS  VNHA+L++GY          N W++KN W   WG +
Sbjct: 261 HVVSSSFRFYDGGVYYEPNCTSS-VNHAVLIIGYGYVGNETDGNNYWLIKNSWGRRWGLS 319

Query: 287 GYMYL-KRGNNRCGIANYAVYALI 309
           GYM + K  NN C IA+ A Y  +
Sbjct: 320 GYMMIAKDRNNHCAIASLAQYPTV 343


>gi|957281|gb|AAB33990.1| cysteine proteinase [Bombyx mori]
          Length = 344

 Score =  190 bits (482), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 173/312 (55%), Gaps = 18/312 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN---HLSDLHPRHYIK 72
           +++ +Y+ +  D+ +   +  +   I  HNQ+ + GL  Y L  N      D+    ++K
Sbjct: 33  QHRLNYKSEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNSWWEHGDMLHHEFVK 92

Query: 73  EMTRLTHSR-------IRRTLVRSPE--SNESVLIPDHLDWREKGFITPDWNQEDCGACY 123
            M     +        ++   VR  +  S  +V +P+ +DWR+ G +T   +Q  CG+C+
Sbjct: 93  TMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCGSCW 152

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKE 183
           +FS   A++GQ F+ +  +  LS Q ++DCS   GN GC GG + N   Y++  GG+  E
Sbjct: 153 SFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDNAFKYIKDNGGIDTE 212

Query: 184 EDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
           + YPY+G    C++   N   +   +  +P  DE  L   +ATVGP++V+I+AS   FQL
Sbjct: 213 QAYPYEGVDDKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTHFQL 272

Query: 244 YASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNR 297
           Y+SG+Y++E C+S  ++H +L+VGY  +      W++KN W   WG+ GY+ + R  NNR
Sbjct: 273 YSSGVYNEEECSSTDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNKNNR 332

Query: 298 CGIANYAVYALI 309
           CGIA+ A Y L+
Sbjct: 333 CGIASSASYPLV 344


>gi|344257450|gb|EGW13554.1| Testin-2 [Cricetulus griseus]
          Length = 401

 Score =  190 bits (482), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 102/285 (35%), Positives = 160/285 (56%), Gaps = 12/285 (4%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W+ N K I  HN E  QG H +T+  N   DL+   + K M      RI+R  +   + +
Sbjct: 120 WEKNFKMIELHNWEYLQGKHDFTMAMNAFGDLNNTEFRKTMAGFRRQRIKRRRIF--QDH 177

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
             + +P  ++WRE+G++TP  +Q  C + +AFS   A++GQ+FK T ++  LS Q ++DC
Sbjct: 178 LFLSVPKQVNWREQGYVTPVKSQGHCASSWAFSATGALEGQMFKKTRKLNALSEQNLLDC 237

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
              +    C+GG +++   YV+  GGL  EE YPY+G    C+++  N   ++  +  +P
Sbjct: 238 MEFNVTRSCSGGFMQSAFQYVRDNGGLATEESYPYQGHAMECRYQAKNSAANVKDFVQIP 297

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----- 268
             +E AL   +A VGPI+V+I+A   +FQ Y SGIY +  C   + NHA+L+VGY     
Sbjct: 298 GHEE-ALMKAVANVGPISVAIDARHSSFQFYESGIYYEPKCKRVHQNHAVLVVGYGFEGE 356

Query: 269 ---TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
                + W++KN W   WG  GYM + +  NN CGIA +A Y ++
Sbjct: 357 ESDGNSYWLVKNSWGEEWGIKGYMKIAKDWNNHCGIATHATYPIV 401


>gi|147903593|ref|NP_001080822.1| cathepsin S precursor [Xenopus laevis]
 gi|33417128|gb|AAH56059.1| Ctss-a protein [Xenopus laevis]
          Length = 333

 Score =  190 bits (482), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 161/304 (52%), Gaps = 9/304 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  + K+Y  +  D ++++ W+ N   ++ HN E   G+H Y L  NHL+D+       +
Sbjct: 31  KNTHSKEYEDETEDLQRRITWEKNLDFVNMHNLEYSMGMHTYELGMNHLADMTSEEMKSK 90

Query: 74  MTRLT---HSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           +T L    HS  +              + D +DWR+KG ++   NQ  CG+C+AFS   A
Sbjct: 91  LTGLILPPHSERKAKFSSQRNGTFGGKVRDSIDWRDKGCVSDVKNQGGCGSCWAFSAVGA 150

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ+   T ++  LS Q +VDC+   GN GC+GG + +   YV    G+  +  YPY  
Sbjct: 151 LEGQLMLKTGKLVSLSPQNLVDCASKYGNKGCSGGFMTSAFQYVIDNNGIDSDSYYPYHA 210

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C ++          ++ + P  E  LK  L T+GPI+V+I+ +  TF LY SG+Y 
Sbjct: 211 MDEKCHYELAGKASSCVKYTEIVPGTEDNLKQALGTIGPISVAIDGTRPTFFLYKSGVYS 270

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D +C+ + VNH +L +GY     ++ W+LKN W  ++GD G++ + R   N CG+A+Y  
Sbjct: 271 DPSCSQE-VNHGVLAIGYGTLNGQDFWLLKNSWGTYYGDKGFVRIARNKGNLCGVASYTS 329

Query: 306 YALI 309
           Y  I
Sbjct: 330 YPEI 333


>gi|392873948|gb|AFM85806.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  190 bits (482), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 166/306 (54%), Gaps = 18/306 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT- 75
           + K Y +K  ++ +++ W+ + + I  HN E   G H + L  NH  D+    + + M  
Sbjct: 36  HGKSYEQK-EETWRRMVWEKHLRVIEIHNLEHSLGKHSFRLGMNHFGDMPNEEFRQLMNG 94

Query: 76  ---RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
              + TH +++ +    P   E   +P H+DWR++G++TP  +Q  CG+C+AFS   A++
Sbjct: 95  YKYKQTHKKLQGSHFLEPNFLE---VPKHVDWRDEGYVTPVKDQGQCGSCWAFSTTGALE 151

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F+ T ++  LS Q +V+CS   GN GC GG +     YV+  GG+  E+ YPY G  
Sbjct: 152 GQHFRRTGQLVSLSEQNLVECSKPEGNEGCNGGLMDQAFQYVKDNGGIDSEDSYPYVGTD 211

Query: 193 SI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C +       + + +  +P   E AL   +A VGP++V+I+A   +FQ Y SGIY +
Sbjct: 212 DTPCHYNPQYNAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFE 271

Query: 252 EACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIAN 302
             C+S  ++H +L+VGY         +  WI+KN WS   G NGY+ + K  +N CGIA 
Sbjct: 272 AECSSTDLDHGVLVVGYGVEKRDTDGKKYWIVKNSWSEKLGQNGYILMAKDKDNHCGIAT 331

Query: 303 YAVYAL 308
            A Y L
Sbjct: 332 AASYPL 337


>gi|195429415|ref|XP_002062758.1| GK19626 [Drosophila willistoni]
 gi|194158843|gb|EDW73744.1| GK19626 [Drosophila willistoni]
          Length = 341

 Score =  190 bits (482), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 168/311 (54%), Gaps = 19/311 (6%)

Query: 17  YKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK 72
           +K ++RK   DS ++      +  N   I  HNQ    G   Y L  N  +D+    + +
Sbjct: 32  FKLEHRKNYADSTEETFRMKIFNENKHHIAKHNQRYATGEVSYKLALNKYADMLHHEFRE 91

Query: 73  EMTRLTHSRIRRTLVRSPE--------SNESVLIPDHLDWREKGFITPDWNQEDCGACYA 124
            M    ++ + + L  + E        S E V +P  +DWR KG +T   +Q  CG+C+A
Sbjct: 92  TMNGFNYT-LHKQLRSTDESFTGVTFISPEHVKLPTAVDWRTKGAVTEVKDQGHCGSCWA 150

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           FS   AI+GQ F+ +  +  LS Q +VDCS   GN GC GG + N   YV+  GG+  E+
Sbjct: 151 FSSTGAIEGQHFRKSGTLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYVKDNGGIDTEK 210

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            Y Y+G    C F + +I      ++ +P  +E  L   +AT+GP++V+I+AS  +FQ Y
Sbjct: 211 SYAYEGIDDSCHFDKNSIGATDRGFADIPQGNEKKLAQAVATIGPVSVAIDASQQSFQFY 270

Query: 245 ASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRC 298
           + G+YD+  C+++ ++H +L+VGY       + W++KN W   WGD G++ + R   N+C
Sbjct: 271 SEGVYDEPNCSAENLDHGVLVVGYGTEKDGSDYWLVKNSWGTTWGDKGFIKMSRNKENQC 330

Query: 299 GIANYAVYALI 309
           GIA+ + Y L+
Sbjct: 331 GIASASSYPLV 341


>gi|197205894|gb|ACH48000.1| silicatein A2 [Latrunculia oparinae]
          Length = 329

 Score =  190 bits (482), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 166/312 (53%), Gaps = 14/312 (4%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW +     QK Y+ D  +      +   W SN K I  HNQ +   + G+TL  NH +
Sbjct: 26  QEWNMWKGMHQKSYQNDLEEL----DRHTVWLSNKKYIEAHNQNSH--VFGFTLAMNHFA 79

Query: 64  DLHPRHYIKEMTRLTH-SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGAC 122
           DL  + + ++   +TH S       +  E N+    PD +DWR K  +T   +Q  CGA 
Sbjct: 80  DLTDQEWTEKF--VTHVSDTAGNYTKYYEPNQFKSYPDTVDWRTKDAVTKVKDQSQCGAS 137

Query: 123 YAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMK 182
           YAFS   A++G    +T  +  LS Q ++DCS+  GN GC GG++     Y+    GL  
Sbjct: 138 YAFSAVGALEGANALATGSLSVLSEQNIIDCSVPYGNHGCKGGNMLYAFKYIIANDGLDV 197

Query: 183 EEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
            + YP++GKQ  C +   +    IS    +    E  L   +A VGP++V+I+ S + F+
Sbjct: 198 AKSYPFQGKQQSCVYDDQDTGGKISGMVRIKQGSESDLIGAVANVGPVSVAIDGSSNAFR 257

Query: 243 LYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NR 297
            YASG+YD   C+S  +NHAM++ GY     ++ W++KN W  +WG +GY+ + RG  N+
Sbjct: 258 FYASGVYDSSRCSSSKLNHAMVVTGYGTYGGKDYWLVKNSWGTNWGQSGYIMMARGKYNQ 317

Query: 298 CGIANYAVYALI 309
           CGIA+ A Y  +
Sbjct: 318 CGIASDACYPTL 329


>gi|226469954|emb|CAX70258.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  190 bits (482), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 167/309 (54%), Gaps = 11/309 (3%)

Query: 12  FPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           F +  +K+ Y     ++K+ L + +N  K+  HN+  Q+G   Y +  N+ +D       
Sbjct: 64  FFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTDKTEYELR 123

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           K     +  RI +    +  S+E   +PD +DWR  G +TP  NQ  CG+C+AFS   AI
Sbjct: 124 KLRGYRSACRIAKPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQGQCGSCWAFSSTGAI 183

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY--- 188
           +GQ ++ T+ +  LS QQ++DCS   GN GC GG +     YV+   G+  E  YPY   
Sbjct: 184 EGQHYRKTNRLVNLSEQQLIDCSKSYGNNGCEGGLMDLAFQYVRDNEGIDSEISYPYISG 243

Query: 189 KGKQSI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
            G +++ C F   NI+  ++ +  +   DE AL   + T+GP++V+INA   +F +Y SG
Sbjct: 244 DGDENVRCLFNFTNIMAQVTGYINIHEGDERALMNAVTTIGPVSVAINAGLSSFSMYKSG 303

Query: 248 IYDDEAC--TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGI 300
           IY D  C   S+ ++H +LLVGY     +  W++KN W   WGD GY+  LK   N C +
Sbjct: 304 IYSDPECASASEDLDHGVLLVGYGIEDGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCSV 363

Query: 301 ANYAVYALI 309
           A+ A Y L+
Sbjct: 364 ASAASYPLV 372


>gi|328909405|gb|AEB61370.1| cathepsin S-like protein, partial [Equus caballus]
          Length = 281

 Score =  190 bits (482), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 152/283 (53%), Gaps = 10/283 (3%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL-THSRIRRTLVRSPES 92
           W+ N K +  HN E   G+H Y L  NHL D+        M+ L   S+ +R +      
Sbjct: 2   WERNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVTSLMSSLRVPSQWQRNVTYKSNP 61

Query: 93  NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
           NE   +PD LDWREKG +T    Q  CGAC+AFS   A++ Q+   T  +  LS Q +VD
Sbjct: 62  NEK--LPDSLDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGNLVSLSAQNLVD 119

Query: 153 CSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
           CS     N GC GG +     Y+    G+  +  YPYK     C++   N     S ++ 
Sbjct: 120 CSTEKYSNKGCNGGFMTAAFQYIIDNNGIDSDASYPYKAMDGKCRYDSKNRAATCSKYTE 179

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--- 268
           LP   E  LK  +A  GP++V+I+AS  +F LY SG+Y D +CT + VNH +L+VGY   
Sbjct: 180 LPFGSEDDLKEAVANKGPVSVAIDASHPSFFLYKSGVYYDPSCTQN-VNHGVLVVGYGNL 238

Query: 269 -TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
             ++ W++KN W  ++GD GY+ + R + N CGIANY  Y  I
Sbjct: 239 NGKDYWLVKNSWGINFGDKGYIRMARNSGNHCGIANYCSYPEI 281


>gi|195382039|ref|XP_002049740.1| GJ20585 [Drosophila virilis]
 gi|194144537|gb|EDW60933.1| GJ20585 [Drosophila virilis]
          Length = 333

 Score =  190 bits (482), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 113/306 (36%), Positives = 164/306 (53%), Gaps = 17/306 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM- 74
           +Y+K Y  +  +  +KL +  N K I  HN     G   Y +  N  +D+ P+ +   M 
Sbjct: 33  EYEKRYESEDEELLRKLIFYDNKKAIDKHNIRYALGKEAYEMGVNQFTDMLPKEFGSLML 92

Query: 75  --TRLTHSRIRRTLVRS-PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
               LT +     ++ S PE+ E   IP  +DWR KG +T   +Q  CG+C+AFS    +
Sbjct: 93  TSINLTDATSDIDIIYSAPENTE---IPSSIDWRVKGAVTSVKDQGKCGSCWAFSAVGTL 149

Query: 132 QGQIFKSTSEIEELSIQQVVDCS--IISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           +GQ F  T ++  LS Q ++DCS      N GC GG     L YV+  GG+  E  YPY 
Sbjct: 150 EGQQFLKTRQLMSLSTQNLLDCSSRYPYSNKGCNGGLPLQALMYVRDNGGIDIESSYPYD 209

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            +Q  C+F R N+   +S+   L   DE  L V  A  GPI+V I+A   TF  Y SG+Y
Sbjct: 210 SRQLSCRFDRHNVGASVSAIVRLKQDDESNLAVATAIKGPISVLIHAG-QTFMQYRSGVY 268

Query: 250 DDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
            D +C   Y NHA+L+VGY  +S     W++KN W   WG++GY+ + R  NN+C IA+Y
Sbjct: 269 KDNSCNK-YFNHAVLVVGYGHDSREGDYWLVKNSWGSKWGESGYIRMARNRNNQCRIASY 327

Query: 304 AVYALI 309
           A++ L+
Sbjct: 328 AIFPLV 333


>gi|157128512|ref|XP_001661463.1| cathepsin l [Aedes aegypti]
 gi|91992510|gb|ABE72971.1| cathepsin L [Aedes aegypti]
 gi|108872552|gb|EAT36777.1| AAEL011167-PA [Aedes aegypti]
          Length = 327

 Score =  190 bits (482), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 165/311 (53%), Gaps = 14/311 (4%)

Query: 5   EWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSD 64
           EW        KKY +       + +++ ++  N  +I +HN+  + G   + +  N  SD
Sbjct: 25  EWTSFKSRHGKKYNR-----TEEHRRRGNYAFNKARIDSHNKRHEHGGASFRMGVNKYSD 79

Query: 65  LHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYA 124
           +    + + M    +S +     R  ++ ++      +DWR KG +TP  +Q  CG+CYA
Sbjct: 80  MDADEFAQTMNGFKYSGVPSQAPR--QARQATTTVTSIDWRTKGAVTPVKDQGRCGSCYA 137

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           FS   A++G  F  T ++  LS Q +VDC+   GN GC GGS+ +   Y++   G+    
Sbjct: 138 FSALGALEGATFTKTGKLVNLSEQNIVDCTSTYGNYGCNGGSMTSVFKYIKTNNGVDTGA 197

Query: 185 DYPYKGK-QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
            YPYK    + C F  P  V    +  VL P +E AL+  +A +GP++V+I+AS  +FQ 
Sbjct: 198 FYPYKAAVAATCGFN-PAYVGATDTGYVLLPANETALQTAVANIGPVSVAIDASNPSFQQ 256

Query: 244 YASGIYDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRC 298
           Y SGIY +  C+S  +NH +L+VGY T N    W +KN W   WG+ GY+ + R  NN C
Sbjct: 257 YKSGIYYEPLCSSSKLNHGVLVVGYGTENGTDYWQVKNSWGTTWGEKGYIKMARNKNNHC 316

Query: 299 GIANYAVYALI 309
           GIA++A Y  +
Sbjct: 317 GIASFASYPTV 327


>gi|195056367|ref|XP_001995082.1| GH22826 [Drosophila grimshawi]
 gi|193899288|gb|EDV98154.1| GH22826 [Drosophila grimshawi]
          Length = 340

 Score =  190 bits (482), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 165/307 (53%), Gaps = 13/307 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++K Y+ +  +  +   +  N  KI  HNQ    G   + +  N  +D+    + + M 
Sbjct: 34  EHRKQYQDETEERFRLKIFNENKHKIAKHNQLYAAGEVSFKMGLNKYADMLHHEFHETMN 93

Query: 76  RLT---HSRIRRTLVRSPE----SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
                 H ++R +          S E V +P  +DWR KG +T   +Q  CG+C+AFS  
Sbjct: 94  GFNYTLHKQLRASDATFTGVTFISPEHVKLPQSVDWRNKGAVTGVKDQGHCGSCWAFSST 153

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++GQ F+ T  +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YPY
Sbjct: 154 GALEGQHFRKTGTLISLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPY 213

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +G    C F +  I      ++ +P  DE  L   +AT+GP++V+I+AS  +FQ Y++G+
Sbjct: 214 EGIDDSCHFNKGTIGATDRGFTDIPQGDEKKLAQAVATIGPVSVAIDASHESFQFYSTGV 273

Query: 249 YDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           YD+  C    ++H +L+VGY      ++ W++KN W   WGD G++ + R  +N+CGIA 
Sbjct: 274 YDEPQCDPQNLDHGVLVVGYGTDENGKDYWLVKNSWGTTWGDKGFIKMARNDDNQCGIAT 333

Query: 303 YAVYALI 309
            + Y L+
Sbjct: 334 ASSYPLV 340


>gi|119573900|gb|EAW53515.1| cathepsin K (pycnodysostosis), isoform CRA_a [Homo sapiens]
          Length = 288

 Score =  189 bits (481), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 100/235 (42%), Positives = 141/235 (60%), Gaps = 10/235 (4%)

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L+HSR   TL   PE       PD +D+R+KG++TP  NQ  CG+C+AFS   A++GQ+ 
Sbjct: 56  LSHSRSNDTLY-IPEWEGRA--PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLK 112

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K T ++  LS Q +VDC  +S N GC GG + N   YVQ   G+  E+ YPY G++  C 
Sbjct: 113 KKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCM 170

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +           +  +P  +E ALK  +A VGP++V+I+AS  +FQ Y+ G+Y DE+C S
Sbjct: 171 YNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNS 230

Query: 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           D +NHA+L VGY        WI+KN W  +WG+ GY+ + R  NN CGIAN A +
Sbjct: 231 DNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASF 285


>gi|208972988|dbj|BAG74343.1| silicatein-M2 [Ephydatia fluviatilis]
          Length = 326

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 163/303 (53%), Gaps = 21/303 (6%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE-MTRL 77
           K Y  +  + ++   W SN K +  HN  A     GYTL  N+L DL    Y ++ +T  
Sbjct: 33  KRYASELEELERHTIWLSNKKYVEEHNARADA--FGYTLAMNNLGDLSAEEYAEQYLTNA 90

Query: 78  THSRIRRTLVRSPESNESVLIP------DHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
             S  +R +       E+ L P      + +DWR KG +T    Q  CGA YAF+   A+
Sbjct: 91  RGSNEQRKM-------ETFLAPKGVQYAESIDWRTKGAVTSVKYQGQCGASYAFAATGAL 143

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +G    +  +   LS Q ++DCS+  GN GC+GG       YV   GG+  E  Y +KGK
Sbjct: 144 EGASALANDKQVTLSEQNIIDCSVPYGNHGCSGGDTYTAFKYVIDNGGIDTESSYSFKGK 203

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           QS C++         +    +    E+ L   +ATVGP+AV+I+A+ + F+ Y SG++D 
Sbjct: 204 QSSCQYNNKTSGASATGVVSIAYGSENDLLAAVATVGPVAVAIDANTNAFRFYQSGVFDS 263

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +C+S  +NHAML+ GY     ++ W++KN WS +WGD+GY+ + R   N+CGIA+ A+Y
Sbjct: 264 SSCSSTKLNHAMLVTGYGSYNGKDYWLVKNSWSKNWGDSGYILMVRNKYNQCGIASDALY 323

Query: 307 ALI 309
            ++
Sbjct: 324 PML 326


>gi|354504284|ref|XP_003514207.1| PREDICTED: cathepsin R-like [Cricetulus griseus]
          Length = 334

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 167/308 (54%), Gaps = 18/308 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++ Y+K Y K+  + ++ + W+ N K I  HN+E   G +G+ +  N   D+    + K 
Sbjct: 33  KETYEKSYSKENEELRRSV-WEKNMKMIKHHNEENSLGKNGFIMEINEFGDMTVEEFRKT 91

Query: 74  MTRL---THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           M  +   TH+  +   +R  E+    ++P  ++WR+KG++T    Q  C +C+AF++  A
Sbjct: 92  MNYIPVRTHTEGKS--IRKREAGG--VLPKSVNWRKKGYVTSVKKQAYCNSCWAFAVNGA 147

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           I+GQ+FK T  +  LS+Q +VDCS   GN GC  G       YV   GG+  E  YPY+G
Sbjct: 148 IEGQMFKKTGNLTRLSVQNLVDCSKPHGNNGCDWGDPYIAYEYVLHNGGVEAEATYPYEG 207

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           K+  C++       +I+ +  L P+ E +L   +AT+GPI+  I+ +   F  Y  GI+ 
Sbjct: 208 KEGPCRYNPKYSAANITGFVSL-PKSEESLMAAVATIGPISAGIDIASDFFMFYKKGIFY 266

Query: 251 DEACTSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIA 301
           D  C +D VNH +L+VGY          N W++KN +   WG  GYM + K  NN C IA
Sbjct: 267 DPKCHNDTVNHVVLVVGYGFEGNETDGNNYWLVKNSYGKKWGLRGYMKIAKDQNNHCAIA 326

Query: 302 NYAVYALI 309
           +YA Y ++
Sbjct: 327 SYAHYPIV 334


>gi|148224022|ref|NP_001087489.1| cathepsin L2 precursor [Xenopus laevis]
 gi|51258284|gb|AAH80004.1| MGC81823 protein [Xenopus laevis]
          Length = 335

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 165/304 (54%), Gaps = 15/304 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y  K    ++ L W+ N + I  HN +   G H Y L  N   D+    + + M  
Sbjct: 36  HKKSYLPKEEGWRRVL-WEKNLRTIEFHNLDHSLGKHSYRLGMNQFGDMTNEEFRQLMNG 94

Query: 77  LTHSR-IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
             + + I+ +   +P + E+   P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ 
Sbjct: 95  YKNQKMIKGSTFLAPNNFEA---PKTVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQH 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI- 194
           ++   ++  LS Q +VDCS   GN GC GG +     YV+  GG+  E+ YPY  K    
Sbjct: 152 YRKAGKLISLSEQNLVDCSRAQGNQGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDDQE 211

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C +       + + +  +P   E  L   +A+VGP++V+++A   +FQ Y SGIY D  C
Sbjct: 212 CHYDPNYNSANDTGFVDVPSGSEKDLMKAVASVGPVSVAVDAGHKSFQFYQSGIYYDPEC 271

Query: 255 TSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAV 305
           +S+ ++H +L+VGY         +  WI+KN WS  WG+NGY+ + K  +N CGIA  A 
Sbjct: 272 SSEDLDHGVLVVGYGFEGEDVDGKRYWIVKNSWSEKWGNNGYIKIAKDRHNHCGIATAAS 331

Query: 306 YALI 309
           Y L+
Sbjct: 332 YPLV 335


>gi|94733563|emb|CAK11015.1| novel protein similar to vertebrate cathepsin L (CTSL) [Danio
           rerio]
          Length = 334

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 171/310 (55%), Gaps = 19/310 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +KK++  Y +++ D  +K  W++N +KI  +N +   GL  + +  N   DL    Y   
Sbjct: 30  KKKHEISYDEESEDVHRKTIWETNMQKIWKNNNDFSFGLSMFKMAMNKYGDLTSVEY--- 86

Query: 74  MTRLTHSRIRRTLVRSPE--------SNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
             RL  S+I+ T  R  +         N   L   ++D+R KG++T   +Q  CG+C++F
Sbjct: 87  -KRLLGSKIKGTGNRKGKITSAQMLRLNAKRLGVTNIDYRAKGYVTEVKDQGYCGSCWSF 145

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           S   AI+GQ++K T  +  LS QQ+VDCS   G  GC+G  + N  +YV     L   + 
Sbjct: 146 STTGAIEGQMYKHTGRLVSLSEQQLVDCSRSYGTYGCSGAWMANAYDYV-INNALESSDT 204

Query: 186 YPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
           YPY    +  C +++   +  IS +  +P  +E AL   +ATVGP++V+I+A   +F  Y
Sbjct: 205 YPYTSVDTQPCFYEKNLAMAGISDYRFVPAGNEQALADAVATVGPVSVAIDADNPSFLFY 264

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKR-GNNRCG 299
           +SGIY +  C  + +NHA+L+VGY        WI+KN W   WG+ GYM + R G N CG
Sbjct: 265 SSGIYKESNCNPNNLNHAVLVVGYGSEEGTDYWIIKNSWGTGWGEGGYMRMIRNGKNTCG 324

Query: 300 IANYAVYALI 309
           IA+YA+Y +I
Sbjct: 325 IASYALYPII 334


>gi|354502593|ref|XP_003513368.1| PREDICTED: cathepsin L1-like isoform 2 [Cricetulus griseus]
          Length = 330

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 157/290 (54%), Gaps = 11/290 (3%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL-THSRIRRT 85
           + +K+  W++N K I  HN++  +G HG+ L  N   DL    + + MT   +       
Sbjct: 45  EGQKRAVWENNRKMIELHNEDYTKGKHGFHLEMNAFGDLTNTEFRQLMTGFQSMGTTEMN 104

Query: 86  LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEEL 145
           + + P   +   +P  +DWR+ G++TP  +Q  C +C+AFS   +++GQ+F+ T ++  L
Sbjct: 105 VFQEPRLGD---VPKSVDWRKHGYVTPVKDQGSCVSCWAFSAVGSLEGQMFRKTGKLVPL 161

Query: 146 SIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVD 205
           S Q +VDCS    N GC GG   +   Y++  GGL   E YPY+ +   C++   +   +
Sbjct: 162 SEQNLVDCSRSQHNNGCHGGLFTSAFQYIKDNGGLDTSESYPYEAQDGPCRYDPKHSAAN 221

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
           I+ + V+ P +E AL   +ATVGPI++ I+    +   Y SG Y D  C + Y NH++LL
Sbjct: 222 ITGFVVV-PSNEEALMKAVATVGPISIGISVRLRSLLFYKSGFYYDPDCYNHYPNHSVLL 280

Query: 266 VGYTRNS-----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           VGY   S     W++KN W   WG +GY+ + K  NN C IA  A Y  +
Sbjct: 281 VGYGEESDGQKYWLVKNSWGEEWGMDGYIKIAKDRNNHCSIATIAAYPTV 330


>gi|68399197|ref|XP_695425.1| PREDICTED: cathepsin L [Danio rerio]
          Length = 349

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 171/310 (55%), Gaps = 19/310 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +KK++  Y +++ D  +K  W++N +KI  +N +   GL  + +  N   DL    Y   
Sbjct: 45  KKKHEISYDEESEDVHRKTIWETNMQKIWKNNNDFSFGLSMFKMAMNKYGDLTSVEY--- 101

Query: 74  MTRLTHSRIRRTLVRSPE--------SNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
             RL  S+I+ T  R  +         N   L   ++D+R KG++T   +Q  CG+C++F
Sbjct: 102 -KRLLGSKIKGTGNRKGKITSAQMLRLNAKRLGVTNIDYRAKGYVTEVKDQGYCGSCWSF 160

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           S   AI+GQ++K T  +  LS QQ+VDCS   G  GC+G  + N  +YV     L   + 
Sbjct: 161 STTGAIEGQMYKHTGRLVSLSEQQLVDCSRSYGTYGCSGAWMANAYDYV-INNALESSDT 219

Query: 186 YPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
           YPY    +  C +++   +  IS +  +P  +E AL   +ATVGP++V+I+A   +F  Y
Sbjct: 220 YPYTSVDTQPCFYEKNLAMAGISDYRFVPAGNEQALADAVATVGPVSVAIDADNPSFLFY 279

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKR-GNNRCG 299
           +SGIY +  C  + +NHA+L+VGY        WI+KN W   WG+ GYM + R G N CG
Sbjct: 280 SSGIYKESNCNPNNLNHAVLVVGYGSEEGTDYWIIKNSWGTGWGEGGYMRMIRNGKNTCG 339

Query: 300 IANYAVYALI 309
           IA+YA+Y +I
Sbjct: 340 IASYALYPII 349


>gi|19698255|dbj|BAB86770.1| cathepsin L-like [Engraulis japonicus]
          Length = 324

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 163/303 (53%), Gaps = 11/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL-HPRHYIK 72
           + K+ K Y     ++ +K  W +NH+KI  HNQ A QG+H Y    N  SD+ H      
Sbjct: 26  KAKFGKSYPSLEKEAHRKGLWLANHQKIQAHNQLADQGVHSYRQGLNQFSDMDHEEFRQT 85

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
            +T++   +  R     P    +V +   +DWR  G ++P  NQ  CG+C++FS   A++
Sbjct: 86  VLTKMDPPKNNRG-ASEPFRALNVGLAASVDWRTSGCVSPIKNQGQCGSCWSFSATGALE 144

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
            Q       +  LS QQ+VDCS   GN GC GG       Y+Q  GG+  E  YPY+ + 
Sbjct: 145 SQTCLRRGYLPSLSEQQLVDCSGSYGNYGCNGGWPDQAFQYIQANGGIDSESYYPYQARV 204

Query: 193 SICKFKRPNIVVDISSW-SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
             C +         S +  V P   E AL+  +A VGP++++I+AS   +Q Y SG+++D
Sbjct: 205 GTCHYNSAYSAATCSGYQDVTPVGSESALQYYVANVGPLSIAIDAS--GWQSYQSGVFND 262

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVY 306
            +C S   +HA+LLVGY     ++ W++KN W   WG+ GY+ + R  NN+CGIAN+A Y
Sbjct: 263 PSC-SQTADHAVLLVGYGTYNGQDYWLVKNSWGTWWGEQGYIMMTRNANNQCGIANHASY 321

Query: 307 ALI 309
            L+
Sbjct: 322 PLV 324


>gi|443685370|gb|ELT89004.1| hypothetical protein CAPTEDRAFT_95613, partial [Capitella teleta]
          Length = 295

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 165/299 (55%), Gaps = 17/299 (5%)

Query: 24  KATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIR 83
           +  ++++K  +++N KKI  HN   +QG   +T+  N  SD+  + +   M     +   
Sbjct: 1   ETEENQRKEVFRNNIKKIQMHNYLHEQGKSPFTMGINQFSDMDEKEFSTIMNGFRMNN-- 58

Query: 84  RTLVR--------SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           RT VR        SP     V +P  +DWR+KG++TP  NQ  CG+C+AFS   A++GQ 
Sbjct: 59  RTKVRDHLHSHYISPAI--PVSVPAEVDWRKKGYVTPVKNQGQCGSCWAFSAIGALEGQH 116

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS Q +VDCS   GN GC GG +     Y++   G   E  YPY+    +C
Sbjct: 117 FRKTGKLVSLSEQNLVDCSKSYGNNGCNGGVMDYAFKYIKDNDGDDTEACYPYEAVDGMC 176

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           +FKR  +      ++ LP  +E  +K  +A VGP++V+I+AS  +F  Y  G+Y ++ C+
Sbjct: 177 RFKRECVGATCRGYTDLPWGNEVKMKEAVALVGPVSVAIDASHSSFMSYKGGVYVEKECS 236

Query: 256 SDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
              ++H +L+VGY        W++KN W   WGD GY+ + R  +N CGIA+ A Y L+
Sbjct: 237 PYQLDHGVLVVGYGTEQGLDYWLVKNSWGTTWGDQGYIKMARNMHNHCGIASMACYPLV 295


>gi|91092022|ref|XP_970951.1| PREDICTED: similar to cathepsin l [Tribolium castaneum]
 gi|270001246|gb|EEZ97693.1| cathepsin L precursor [Tribolium castaneum]
          Length = 343

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 170/322 (52%), Gaps = 19/322 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW+      +  Y K Y     ++ ++  +  N  KI   NQE  +G   +  + N
Sbjct: 28  LLQEEWMAF----KLTYNKSYASPEEENFRREIFIENRHKIARFNQEYGRGQWSFVQQLN 83

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN-----ESVLIPDHLDWREKGFITPDWN 115
           + +D+    + + +     +   R  +  P+S+      +V+ PD++DWRE G +TP  N
Sbjct: 84  NFADMLHHEFHRTLNGFNRTLSARVGI--PQSSTFIPSANVIFPDYVDWREVGAVTPVKN 141

Query: 116 QEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQ 175
           Q  C  C+AFS A A++G  F+ T  + ELS Q ++DCS   GN GC+GG +     YV+
Sbjct: 142 QGSCAGCWAFSAAGALEGHNFRKTGRLVELSPQNLIDCSTNYGNDGCSGGLMNPAYEYVR 201

Query: 176 FAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSIN 235
              G+  E+ YPY+ +   C+F+   +    + +  +   DE  L+  +AT+GP++ +++
Sbjct: 202 TNPGIDTEDSYPYEARNGPCRFRPETVGAYCTGYVDIAEGDEQGLEAAIATLGPVSAAMD 261

Query: 236 ASPHTFQLYASGIYDDEACTS--DYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGY 288
           A   +FQ Y+ GIY D  C +  D VNHA+L+VGY      +  W++KN +   WG  GY
Sbjct: 262 AGRQSFQFYSDGIYYDPQCGNRPDDVNHAVLVVGYGTEPNGQKYWLVKNSYGPQWGIGGY 321

Query: 289 MYL-KRGNNRCGIANYAVYALI 309
           + L K  NN CGIA  A Y L+
Sbjct: 322 VKLAKDANNHCGIAIQASYPLV 343


>gi|410990004|ref|XP_004001240.1| PREDICTED: cathepsin L1-like isoform 2 [Felis catus]
          Length = 334

 Score =  189 bits (480), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 160/290 (55%), Gaps = 13/290 (4%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  W  N K I  HN+E  Q  H +T+  N   D+    + + M  L   + ++  V  
Sbjct: 48  RRAVWGENMKMIVQHNREYNQKEHSFTMAMNGFGDMTNEEFRQVMNGLQIQKHKKGKVFQ 107

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
           P       IP  ++WR+KG++TP  NQ  C + +AFS   AI+GQ+F  T ++  LS Q 
Sbjct: 108 PPLFAE--IPSSVNWRKKGYVTPTKNQGQCASGWAFSATGAIEGQMFGKTHKLVSLSEQN 165

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ-SICKFKRPNIVVDISS 208
           ++DC+   GN GC+GGS+ N   YV+  GGL  EE YPY  +    CK+   +   DI+ 
Sbjct: 166 LLDCAWSEGNGGCSGGSMGNAFQYVKDNGGLDSEESYPYHAQDLQSCKYNPESSAADITG 225

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           +  + P+ E+ L  ++A VGP++ +I+AS  TF+ Y  GIY D  C+ + ++H +L+VGY
Sbjct: 226 FLTI-PKTEYKLMRSVAIVGPVSAAIDASLDTFRFYDQGIYYDSNCSHEILHHGVLIVGY 284

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
                    +  WI+KN W   WG +GY+ + K  +N CGIA+ A +  +
Sbjct: 285 GFEGAELDNKKYWIVKNSWGEAWGIDGYILMAKDRDNHCGIASLASFPTV 334


>gi|261824891|pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex
 gi|261824892|pdb|3H6S|B Chain B, Strucure Of Clitocypin - Cathepsin V Complex
 gi|261824893|pdb|3H6S|C Chain C, Strucure Of Clitocypin - Cathepsin V Complex
 gi|261824894|pdb|3H6S|D Chain D, Strucure Of Clitocypin - Cathepsin V Complex
 gi|310942696|pdb|3KFQ|A Chain A, Unreduced Cathepsin V In Complex With Stefin A
 gi|310942697|pdb|3KFQ|B Chain B, Unreduced Cathepsin V In Complex With Stefin A
          Length = 221

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/218 (43%), Positives = 135/218 (61%), Gaps = 9/218 (4%)

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
           +P  +DWR+KG++TP  NQ+ CG+ +AFS   A++GQ+F+ T ++  LS Q +VDCS   
Sbjct: 1   LPKSVDWRKKGYVTPVKNQKQCGSXWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQ 60

Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
           GN GC GG +     YV+  GGL  EE YPY     ICK++  N V   + ++V+ P  E
Sbjct: 61  GNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVAQDTGFTVVAPGKE 120

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY------TRN 271
            AL   +ATVGPI+V+++A   +FQ Y SGIY +  C+S  ++H +L+VGY      + N
Sbjct: 121 KALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSDN 180

Query: 272 S--WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVY 306
           S  W++KN W   WG NGY+ + K  NN CGIA  A Y
Sbjct: 181 SKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASY 218


>gi|301628908|ref|XP_002943589.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 307

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/297 (36%), Positives = 158/297 (53%), Gaps = 10/297 (3%)

Query: 21  YRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHS 80
           Y  +  +  ++  W+   K I  HN E   GLH Y +  NHL D+        MT  T S
Sbjct: 13  YNSQEEERARRTIWEETLKFISVHNLEYSLGLHTYEVGMNHLGDMTGEEVAATMTGYTGS 72

Query: 81  RIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQED-CGACYAFSIASAIQGQIFKS 138
                 +   P+     L P  +DWR +  +TP  +Q   C +CYAFS   A++ Q  K 
Sbjct: 73  GDSLANMSHVPKEILEALAPPSIDWRTQNCVTPVRDQGSFCRSCYAFSAVGALECQWKKK 132

Query: 139 TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFK 198
           T  +   S Q++VDCS   GN GC GG +     Y++  G +M+E  YPY G++ +C+ K
Sbjct: 133 TVRLVTFSPQELVDCSDGEGNHGCNGGKIEKAFKYMKKYG-VMEESAYPYTGQKGLCRKK 191

Query: 199 RPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDY 258
           +P  +  + +   LP  +E  L  T+ T+GP++VSINAS   F  + SG+Y +  C  + 
Sbjct: 192 QPGNIGVVKAIHDLPSGNETLLMNTVGTIGPVSVSINASSEKFHQFKSGVYYNPDCLPNK 251

Query: 259 VNHAMLLVGYTRNS----WILKNWWSHHWGDNGY--MYLKRGNNRCGIANYAVYALI 309
           VNHA+L+VGY + +    W++KN W   +G+NGY  M   RGNN CGIA   VYA +
Sbjct: 252 VNHAVLVVGYGKENGMDYWLVKNSWGVQFGENGYIKMARNRGNN-CGIATRPVYATV 307


>gi|256561153|gb|ACU86976.1| silicatein-like protein [Aulosaccus sp. GV-2009]
          Length = 352

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/305 (36%), Positives = 161/305 (52%), Gaps = 13/305 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ K Y     + +  L W SN K +  HN  A Q + GYTL  NHL D+  + Y    T
Sbjct: 50  KHTKSYESSLQELEHHLVWLSNKKYVDYHN--ANQHIFGYTLALNHLGDVTEKQYQDTYT 107

Query: 76  RLTH-SRIRRTLVR---SPESNESVLIPDHLDWREKGFITPDWNQ--EDCGACYAFSIAS 129
             +  S I+R  +R   +P +  +   PD +DWR KG +    NQ    C +CYAFS   
Sbjct: 108 CYSAASSIQRASIRVHETPPNFNASSYPDSMDWRTKGAVGSVKNQWYGQCDSCYAFSAVG 167

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++G    +      LS Q ++DCSI  GN GC+GG+  N+  YV    G+ K+  Y YK
Sbjct: 168 ALEGATALAKGYFVSLSEQNIIDCSIPYGNYGCSGGNHYNSFMYVIANDGIDKQSSYTYK 227

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+Q  C +         S    +   DE +L   + ++GPIAV+++A  + F+ Y+SG++
Sbjct: 228 GRQDSCSYSDNYRGSSQSGIVQIKSGDESSLLAAVYSMGPIAVAVDARSNAFKYYSSGVF 287

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYA 304
           D   CTS  + H+MLL GY     +N W+LKN W   WG +GY+ + R G N+CGIA  A
Sbjct: 288 DSSRCTSTNLAHSMLLTGYGAYQGKNYWLLKNSWGSQWGMSGYIMMTRNGYNQCGIATDA 347

Query: 305 VYALI 309
            Y  +
Sbjct: 348 SYPTL 352


>gi|110349475|gb|ABG73218.1| cathepsin L 2 precursor [Diaprepes abbreviatus]
          Length = 348

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 171/315 (54%), Gaps = 27/315 (8%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHP----RHYI 71
           ++ K Y  ++ +  ++  +  N  +I+ HN+  + GL  Y +  NHL DL      R Y 
Sbjct: 34  EHGKVYESESENEYRQSVFMENLFQINEHNKLYEMGLSSYQMAMNHLGDLTKDEFMRIYT 93

Query: 72  KEMTRLTHSR--------------IRRTLVRS-PESNESVLIPDHLDWREKGFITPDWNQ 116
             M +L  S               ++  +  + P + + V +P  +DWR+KG +TP  NQ
Sbjct: 94  VNMPQLPQSENLSDSEPWLDLPQDLQGFVTYALPTNLDEVDLPTDIDWRQKGAVTPVKNQ 153

Query: 117 EDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQF 176
            +CG+C++FS   A++ Q FK T+++  LS QQ+VDCS   GN GC GG +     Y++ 
Sbjct: 154 RNCGSCWSFSATGALEAQWFKKTNKLISLSEQQLVDCSGRYGNHGCHGGWMHWAFGYIKE 213

Query: 177 AGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINA 236
            GG+  E+ YPY  K   C +K  N    +S   ++ P+ E+ L   +++VGPI+++   
Sbjct: 214 NGGIDTEQSYPYTAKDGRCAYKPGNKAATVSQ-VIMVPRGENQLAAKVSSVGPISIAAEV 272

Query: 237 SPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYL- 291
           S H FQ Y SG+YD+  C    +NHAML VGY     +N W++KN W   WGD GY+ + 
Sbjct: 273 S-HKFQFYHSGVYDEPQCGHS-LNHAMLAVGYGSMGGKNFWLVKNSWGTGWGDQGYIRMA 330

Query: 292 KRGNNRCGIANYAVY 306
           K  NN+CGIA  A Y
Sbjct: 331 KDKNNQCGIALMASY 345


>gi|295321664|pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In
           Compl Chondroitin-4-Sulfate
 gi|295321665|pdb|3H7D|E Chain E, The Crystal Structure Of The Cathepsin K Variant M5 In
           Compl Chondroitin-4-Sulfate
          Length = 215

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 7/213 (3%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +D+REKG++TP  NQ  CG+C+AFS   A++GQ+ K T ++  LS Q +VDC  +S 
Sbjct: 2   PDSVDYREKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSE 59

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   YVQ   G+  E+ YPY G++  C +           +  +P  +E 
Sbjct: 60  NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEK 119

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WI 274
           ALK  +A VGP++V+I+AS  +FQ Y+ G+Y DE+C SD +NHA+L VGY  +     WI
Sbjct: 120 ALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGESKGNKHWI 179

Query: 275 LKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           +KN W  +WG  GY+ + R  NN CGIAN A +
Sbjct: 180 IKNSWGENWGMGGYIKMARNKNNACGIANLASF 212


>gi|228245|prf||1801240C Cys protease 3
          Length = 321

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 166/302 (54%), Gaps = 11/302 (3%)

Query: 17  YKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK 72
           +K  Y +K  D+K++L+    +Q N + I   N++ + G   + +  N   D+    +  
Sbjct: 22  FKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNA 81

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
            M    + +  R   ++  + E   +   +DWR K  +TP  +QE CG+C+AFS   A++
Sbjct: 82  VMK--GYKKGSRGEPKAVFTAEGRPMARDVDWRTKALVTPVKDQEQCGSCWAFSATGALE 139

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F    E+  LS QQ+VDCS   GN GC GG + +  +Y++  GG+  E  YPY+ + 
Sbjct: 140 GQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAED 199

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C+F   +I    +    +    E AL+  ++ VGPI+V+I+AS  +FQ Y+SG+Y ++
Sbjct: 200 RSCRFDANSIGAICTGSVEIVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQ 259

Query: 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            C+  +++H +L VGY    T++ W++KN W   WGD GY+ + R  +N CGIA+   Y 
Sbjct: 260 NCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYP 319

Query: 308 LI 309
            +
Sbjct: 320 TV 321


>gi|344257451|gb|EGW13555.1| Cathepsin L1 [Cricetulus griseus]
          Length = 474

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 158/296 (53%), Gaps = 11/296 (3%)

Query: 21  YRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHS 80
           Y  +  + +++  W+ N K I  HN+E  QG + +T+  N   D  P    + +T     
Sbjct: 183 YNFQNEEVERRALWEENMKLIQLHNKEYHQGKNTFTMAMNAFGDQRPLELAQTLTAFQSQ 242

Query: 81  RIRRT-LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKST 139
             + T + + P   +   +P  +DWR+ G++TP  +Q  C +C+AFS   +++GQ+F+ T
Sbjct: 243 EAKETNIFQEPLLGD---VPKSVDWRKHGYVTPVKDQGSCVSCWAFSAVGSLEGQMFRKT 299

Query: 140 SEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKR 199
            ++  LS Q +VDCS    N GC GG   +   Y++  GGL   E YPY+ +   C++  
Sbjct: 300 GKLVPLSEQNLVDCSRSQHNNGCHGGLFTSAFQYIKDNGGLDTSESYPYEAQDGPCRYDP 359

Query: 200 PNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYV 259
            +   +I+ + V+ P +E AL   +ATVGPI++ I+    +   Y SG Y D  C + Y 
Sbjct: 360 KHSAANITGFVVV-PSNEEALMKAVATVGPISIGISVRLRSLLFYKSGFYYDPDCYNHYP 418

Query: 260 NHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           NH++LLVGY   S     W++KN W   WG +GY+ + K  NN C IA  A Y  +
Sbjct: 419 NHSVLLVGYGEESDGQKYWLVKNSWGEEWGMDGYIKIAKDRNNHCSIATIAAYPTV 474



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 4/155 (2%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL-THSRIRRT 85
           + +K+  W++N K I  HN++  +G HG+ L  N   DL    + + MT   +       
Sbjct: 10  EGQKRAVWENNRKMIELHNEDYTKGKHGFHLEMNAFGDLTNTEFRQLMTGFQSMGTTEMN 69

Query: 86  LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEEL 145
           + + P   +   +P  +DWR+ G++TP  +Q  CGAC+AFS   ++ GQ+F  T ++  L
Sbjct: 70  VFQEPRLGD---VPKSVDWRKHGYVTPVKDQGSCGACWAFSAVGSLVGQMFWKTGKLVPL 126

Query: 146 SIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           S Q +VDCS   GN+GC GG ++N   YV   GGL
Sbjct: 127 SEQNLVDCSWSHGNIGCHGGLMQNAFQYVMDNGGL 161


>gi|307141900|gb|ADN34745.1| putative cysteine peptidase [Echinococcus granulosus]
          Length = 218

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 129/215 (60%), Gaps = 7/215 (3%)

Query: 96  VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSI 155
           +L+PD +DWR+KG +TP  +Q DCG+C+AFS   A++GQ+ +   ++  LS QQ+VDCS 
Sbjct: 5   MLVPDSIDWRKKGLVTPIKDQGDCGSCWAFSATGALEGQLKRKKGKLISLSEQQLVDCST 64

Query: 156 ISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQ 215
             GN GC GG + +   Y     G   E DYPY      CKF    +V  +S +  +P +
Sbjct: 65  DMGNEGCNGGYMNDAFRY-WMQNGAESESDYPYTAMDGKCKFNSSKVVTKVSKFVKVPKK 123

Query: 216 DEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS--- 272
            E  LK+++A VGP++V+I+A+   F LY  GIY D  C+  Y++HA+L+VGY  +    
Sbjct: 124 REDQLKLSVAQVGPVSVAIDAASSGFMLYKKGIYQDNTCSQQYLDHAVLVVGYDADMAGQ 183

Query: 273 --WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
             WI+KN W   WG  GY+++ R   N CGIA  A
Sbjct: 184 KYWIVKNSWGEDWGQRGYIWMARDKGNMCGIATMA 218


>gi|391343119|ref|XP_003745860.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 385

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 161/309 (52%), Gaps = 31/309 (10%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K Y     +  ++L ++ NH+ I  HN + +     + L  NH  DL  + Y   
Sbjct: 85  KAEHNKKYESFPEELMRRLIFEENHQFIEDHNSKKE---FDFYLGMNHFGDLTNKEY--- 138

Query: 74  MTRLTHSRIRRTLVRSPESNESVL------------IPDHLDWREKGFITPDWNQEDCGA 121
                  R R    R PE+  S              +PD +DWR++GF+TP  NQ  CG+
Sbjct: 139 -------RERYLGYRRPENTPSKASYIFSRAEKIEDVPDQIDWRDQGFVTPVKNQGQCGS 191

Query: 122 CYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLM 181
           C+AFS   +++GQ FKST ++  LS Q +VDCS   GN GC GG +     YV+   G+ 
Sbjct: 192 CWAFSAVGSLEGQHFKSTGKLVSLSEQNLVDCSTPEGNSGCNGGWMDQAFEYVKDNHGID 251

Query: 182 KEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTF 241
            E+ YPY G    C FK  +I   +  +  +   DE AL+  +   GP++V+I+AS   F
Sbjct: 252 TEDSYPYVGTDGSCHFKNKSIGATLKGFMDVKEGDEEALRQAVGVAGPVSVAIDASSMLF 311

Query: 242 QLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-N 295
           Q Y  G+Y+   C++  ++H +L+VGY      ++ W++KN W   WG  GY+ + R   
Sbjct: 312 QFYRGGVYNVPWCSTSELDHGVLVVGYGKQFQGKDFWMVKNSWGVGWGIYGYIEMSRNKG 371

Query: 296 NRCGIANYA 304
           N+CGIA+ A
Sbjct: 372 NQCGIASKA 380


>gi|157779038|gb|ABV71063.1| cathepsin L3 precursor [Schistosoma mansoni]
 gi|360044915|emb|CCD82463.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 370

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 172/314 (54%), Gaps = 21/314 (6%)

Query: 12  FPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           F + ++K+ Y     ++++   + +N  K+  HN   Q+G   Y +  N  +D    + +
Sbjct: 62  FFKIQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQEGKVTYKMGVNEFTD-KTDYEL 120

Query: 72  KEMT--RLTHSRIR---RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFS 126
           K++   ++T   IR    T +RS    E   +P  +DWR +G +T   NQ  CG+C+AFS
Sbjct: 121 KKLRGYKVTSGAIRHKGSTFIRS----EHTKLPSKVDWRREGAVTDVKNQGQCGSCWAFS 176

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              AI+GQ ++ T+ +  LS QQ+VDCS   GN GC+GG + +   YV+   G+  E  Y
Sbjct: 177 TTGAIEGQHYRKTNRLVNLSEQQLVDCSKSYGNNGCSGGLMNSAFEYVRDNEGIDSEISY 236

Query: 187 PYKGKQSI----CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
           PY          C F   NI+  ++ +  +   DE AL   +AT GP++V+INA   +F 
Sbjct: 237 PYVSGDGTENNRCLFNASNILAQVTGYVNIHEGDERALMDAVATKGPVSVAINAGLPSFS 296

Query: 243 LYASGIYDDEAC--TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN- 295
           +Y SGIY D  C  T D ++H +L+VGY     R+ W++KN W   WG+ GY+ + +G+ 
Sbjct: 297 MYKSGIYSDTDCEGTLDALDHGVLVVGYGEENGRSYWLIKNSWGEEWGEKGYIKISKGSH 356

Query: 296 NRCGIANYAVYALI 309
           N CG+A+ A Y L+
Sbjct: 357 NMCGVASAASYPLV 370


>gi|380014284|ref|XP_003691169.1| PREDICTED: cathepsin L-like [Apis florea]
          Length = 345

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 169/321 (52%), Gaps = 16/321 (4%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + N+EW+   +  +K YK D  ++    + K+   + HK I  HN   +     Y L+ N
Sbjct: 23  LVNQEWMTFKMEHKKAYKSDVEERF---RMKIFMDNKHK-IAKHNSNYEMKKVSYKLKMN 78

Query: 61  HLSDLHPRHYIKEMTRLTHS------RIRRTLVRSPESNESVLIPDHLDWREKGFITPDW 114
              D+    ++  +     S        R  +  S     +V +P  +DWR++G +TP  
Sbjct: 79  KYGDMLHHEFVNILNGFNKSINTQLRSERMPIGASFIEPANVALPKKVDWRKEGAVTPVK 138

Query: 115 NQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174
           +Q  CG+C++FS   A++GQ F+ T  +  LS Q ++DCS   GN GC GG +     Y+
Sbjct: 139 DQGHCGSCWSFSATGALEGQHFRRTGVLVSLSEQNLIDCSGKYGNNGCNGGLMDQAFQYI 198

Query: 175 QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
           +   GL  E  YPY+ +   C++   N       +  +P  +E  LK  +AT+GP++V+I
Sbjct: 199 KDNKGLDTEASYPYEAENDKCRYNPANSGAIDVGYIDIPTGNEKLLKAAVATIGPVSVAI 258

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM 289
           +AS  +FQ Y+ G+Y +  C+S+ ++H +L++GY  N      W++KN W   WG+NGY+
Sbjct: 259 DASHQSFQFYSEGVYYEPECSSEELDHGVLVIGYGTNENGEDYWLVKNSWGETWGNNGYI 318

Query: 290 YLKRGN-NRCGIANYAVYALI 309
            + R   N CGIA+ A Y L+
Sbjct: 319 KMARNKLNHCGIASSASYPLV 339


>gi|340727787|ref|XP_003402217.1| PREDICTED: cathepsin L-like [Bombus terrestris]
          Length = 343

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 167/321 (52%), Gaps = 16/321 (4%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + N+EW    +   K YK D  ++    + K+   + HK I  HN   +     Y L+ N
Sbjct: 23  LVNQEWTTFKMEHNKVYKNDVEERF---RMKIFMDNKHK-IAKHNGNYEMKKVSYKLKMN 78

Query: 61  HLSDLHPRHYIKEMTRLTHS------RIRRTLVRSPESNESVLIPDHLDWREKGFITPDW 114
              D+    ++  +     S        R  +  S     +V++P  +DWRE G +TP  
Sbjct: 79  KYGDMLHHEFVNTLNGFNKSINTQLRSERLPIAASFIEPANVVLPKTVDWREHGAVTPVK 138

Query: 115 NQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174
           +Q  CG+C++FS   A++GQ F+ T  +  LS Q ++DCS   GN GC GG +     Y+
Sbjct: 139 DQGHCGSCWSFSATGALEGQHFRRTGILIPLSEQNLIDCSGKYGNNGCNGGLMDQAFQYI 198

Query: 175 QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
           +   GL  E  YPY+ +   C++   N       +  +P  +E  LK  +AT+GP++V+I
Sbjct: 199 KDNKGLDTEVTYPYEAENDKCRYNAANSGARDVGYVDIPQGNEKKLKAAVATIGPVSVAI 258

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYM 289
           +AS  +FQ Y+ G+Y +  C+S+ ++H +L VGY      ++ W++KN W   WGDNGY+
Sbjct: 259 DASHQSFQFYSEGVYYEPECSSENLDHGVLAVGYGTDENGQDYWLVKNSWGETWGDNGYI 318

Query: 290 YLKRGN-NRCGIANYAVYALI 309
            + R   N CGIA+ A Y L+
Sbjct: 319 KMARNKLNHCGIASTASYPLV 339


>gi|195381187|ref|XP_002049336.1| GJ20806 [Drosophila virilis]
 gi|194144133|gb|EDW60529.1| GJ20806 [Drosophila virilis]
          Length = 339

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 161/312 (51%), Gaps = 17/312 (5%)

Query: 15  KKYKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY 70
           + +K ++RK   D  ++      +  N  KI  HNQ    G   + +  N  +D+    +
Sbjct: 28  QTFKLEHRKNYVDETEERFRLKIFNENKHKIAKHNQRYASGEVSFKMAVNKYADMLHHEF 87

Query: 71  IKEMTRLTHSRIRRTLVRSPE-------SNESVLIPDHLDWREKGFITPDWNQEDCGACY 123
              M    ++  ++     P        S E V IP  +DWR KG +T   +Q  CG+C+
Sbjct: 88  HTTMNGFNYTLHKQLRASDPSFVGVTFISPEHVKIPKSVDWRSKGAVTEVKDQGHCGSCW 147

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKE 183
           AFS   A++GQ F+    +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E
Sbjct: 148 AFSSTGALEGQHFRKAGTLISLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTE 207

Query: 184 EDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
           + YPY+G    C F +  I         +P  DE  +   +AT+GP++V+I+AS  +FQ 
Sbjct: 208 KSYPYEGIDDSCHFNKATIGATDRGSVDIPQGDEKKMAEAVATIGPVSVAIDASHESFQF 267

Query: 244 YASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKR-GNNR 297
           Y+ GIY++  C    ++H +L+VGY  +      W++KN W   WGD G++ + R  +N+
Sbjct: 268 YSEGIYNEPQCDPQNLDHGVLVVGYGTDESGQDYWLVKNSWGTTWGDKGFIKMARNADNQ 327

Query: 298 CGIANYAVYALI 309
           CGIA+ + Y L+
Sbjct: 328 CGIASASSYPLV 339


>gi|75765285|pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abe854
 gi|75765286|pdb|1U9W|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abi491
 gi|75765287|pdb|1U9X|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abj688
 gi|160286063|pdb|2R6N|A Chain A, Crystal Structure Of A Pyrrolopyrimidine Inhibitor In
           Complex With Human Cathepsin K
          Length = 217

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 7/213 (3%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +D+R+KG++TP  NQ  CG+C+AFS   A++GQ+ K T ++  LS Q +VDC  +S 
Sbjct: 4   PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSE 61

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   YVQ   G+  E+ YPY G++  C +           +  +P  +E 
Sbjct: 62  NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEK 121

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWI 274
           ALK  +A VGP++V+I+AS  +FQ Y+ G+Y DE+C SD +NHA+L VGY        WI
Sbjct: 122 ALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWI 181

Query: 275 LKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           +KN W  +WG+ GY+ + R  NN CGIAN A +
Sbjct: 182 IKNSWGENWGNKGYILMARNKNNACGIANLASF 214


>gi|2914594|pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent
           Vinyl Sulfone Inhibitor
 gi|28374044|pdb|1NL6|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374045|pdb|1NL6|B Chain B, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374047|pdb|1NLJ|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374048|pdb|1NLJ|B Chain B, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|47168617|pdb|1Q6K|A Chain A, Cathepsin K Complexed With T-butyl(1s)-1-cyclohexyl-2-
           Oxoethylcarbamate
 gi|55670045|pdb|1TU6|A Chain A, Cathepsin K Complexed With A Ketoamide Inhibitor
 gi|55670046|pdb|1TU6|B Chain B, Cathepsin K Complexed With A Ketoamide Inhibitor
 gi|62738654|pdb|1YK7|A Chain A, Cathepsin K Complexed With A Cyanopyrrolidine Inhibitor
 gi|73535690|pdb|1YK8|A Chain A, Cathepsin K Complexed With A Cyanamide-Based Inhibitor
 gi|73535721|pdb|1YT7|A Chain A, Cathepsin K Complexed With A Constrained Ketoamide
           Inhibitor
 gi|93278849|pdb|2BDL|A Chain A, Cathepsin K Complexed With A Pyrrolidine Ketoamide-Based
           Inhibitor
 gi|114793438|pdb|2ATO|A Chain A, Crystal Structure Of Human Cathepsin K In Complex With
           Myocrisin
 gi|114793448|pdb|2AUX|A Chain A, Cathepsin K Complexed With A Semicarbazone Inhibitor
 gi|114793451|pdb|2AUZ|A Chain A, Cathepsin K Complexed With A Semicarbazone Inhibitor
 gi|126030469|pdb|2FTD|A Chain A, Crystal Structure Of Cathepsin K Complexed With 7-Methyl-
           Substituted Azepan-3-One Compound
 gi|126030470|pdb|2FTD|B Chain B, Crystal Structure Of Cathepsin K Complexed With 7-Methyl-
           Substituted Azepan-3-One Compound
 gi|157830076|pdb|1ATK|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor E-64
 gi|157830085|pdb|1AU0|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Symmetric Diacylaminomethyl
           Ketone Inhibitor
 gi|157830086|pdb|1AU2|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Propanone Inhibitor
 gi|157830087|pdb|1AU3|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Pyrrolidinone Inhibitor
 gi|157830088|pdb|1AU4|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Pyrrolidinone Inhibitor
 gi|157830146|pdb|1AYU|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Symmetric Biscarbohydrazide
           Inhibitor
 gi|157830147|pdb|1AYV|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Thiazolhydrazide Inhibitor
 gi|157830148|pdb|1AYW|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent
           Benzyloxybenzoylcarbohydrazide Inhibitor
 gi|157830300|pdb|1BGO|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Peptidomimetic Inhibitor
 gi|197305045|pdb|3C9E|A Chain A, Crystal Structure Of The Cathepsin K : Chondroitin Sulfate
           Complex.
 gi|290560385|pdb|3KW9|A Chain A, X-Ray Structure Of Cathepsin K Covalently Bound To A
           Triazine Ligand
 gi|290560386|pdb|3KWZ|A Chain A, Cathepsin K In Complex With A Non-Selective 2-Cyano-
           Pyrimidine Inhibitor
 gi|290560387|pdb|3KX1|A Chain A, Cathepsin K In Complex With A Selective 2-Cyano-Pyrimidine
           Inhibitor
 gi|293651910|pdb|3KWB|X Chain X, Structure Of Catk Covalently Bound To A Dioxo-Triazine
           Inhibitor
 gi|293651911|pdb|3KWB|Y Chain Y, Structure Of Catk Covalently Bound To A Dioxo-Triazine
           Inhibitor
 gi|308198615|pdb|3O1G|A Chain A, Cathepsin K Covalently Bound To A 2-Cyano Pyrimidine
           Inhibitor With A Benzyl P3 Group.
 gi|327200584|pdb|3O0U|A Chain A, Cathepsin K Covalently Bound To A Cyano-Pyrimidine
           Inhibitor With Improved Selectivity Over Herg
 gi|394986262|pdb|4DMX|A Chain A, Cathepsin K Inhibitor
 gi|394986263|pdb|4DMY|A Chain A, Cathepsin K Inhibitor
 gi|394986264|pdb|4DMY|B Chain B, Cathepsin K Inhibitor
          Length = 215

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 7/213 (3%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +D+R+KG++TP  NQ  CG+C+AFS   A++GQ+ K T ++  LS Q +VDC  +S 
Sbjct: 2   PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSE 59

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   YVQ   G+  E+ YPY G++  C +           +  +P  +E 
Sbjct: 60  NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEK 119

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWI 274
           ALK  +A VGP++V+I+AS  +FQ Y+ G+Y DE+C SD +NHA+L VGY        WI
Sbjct: 120 ALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWI 179

Query: 275 LKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           +KN W  +WG+ GY+ + R  NN CGIAN A +
Sbjct: 180 IKNSWGENWGNKGYILMARNKNNACGIANLASF 212


>gi|50513589|pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized
           Norleucine Aldehyde
          Length = 214

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 7/213 (3%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +D+R+KG++TP  NQ  CG+C+AFS   A++GQ+ K T ++  LS Q +VDC  +S 
Sbjct: 1   PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSE 58

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   YVQ   G+  E+ YPY G++  C +           +  +P  +E 
Sbjct: 59  NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEK 118

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWI 274
           ALK  +A VGP++V+I+AS  +FQ Y+ G+Y DE+C SD +NHA+L VGY        WI
Sbjct: 119 ALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWI 178

Query: 275 LKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           +KN W  +WG+ GY+ + R  NN CGIAN A +
Sbjct: 179 IKNSWGENWGNKGYILMARNKNNACGIANLASF 211


>gi|228244|prf||1801240B Cys protease 2
          Length = 323

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 6/301 (1%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + KY + Y     DS +++ ++ N K I   N++ + G   + L  N   D+    +   
Sbjct: 24  KGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAV 83

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           M      R     V  P+  E+      +DWR KG +TP  +Q  CG+C+AFS   +++G
Sbjct: 84  MKGNIPRRSAPVSVFYPK-KETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEG 142

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q F  T  +  L+ QQ+VDCS   G  GC GG + +  +Y++   G+  E  YPY+ +  
Sbjct: 143 QHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEASYPYEARDG 202

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+F   ++    S  + +    E  L+  +  +GPI+V+I+A+  +FQ Y+SG+Y + +
Sbjct: 203 SCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPS 262

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           C+  Y++HA+L VGY     ++ W++KN W+  WGD GY+ + R  NN CGIA  A Y L
Sbjct: 263 CSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVASYPL 322

Query: 309 I 309
           +
Sbjct: 323 V 323


>gi|194883222|ref|XP_001975702.1| GG20414 [Drosophila erecta]
 gi|190658889|gb|EDV56102.1| GG20414 [Drosophila erecta]
          Length = 341

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 172/321 (53%), Gaps = 21/321 (6%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLH-WQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           +EW    +  +K Y+ D     T+ + +L  +  N  KI  HNQ   +G   + L  N  
Sbjct: 27  EEWHTFKLEHRKNYQDD-----TEERFRLKIFNENKHKIAKHNQRYAEGKVSFKLAVNKY 81

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDW 114
           +DL    + + M    ++ + + L  + +S + V         +P  +DWR KG +T   
Sbjct: 82  ADLLHHEFRQLMNGFNYT-LHKQLRSTDDSFKGVTFISPAHVTLPKSVDWRTKGAVTAVK 140

Query: 115 NQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174
           +Q  CG+C+AFS   A++GQ F+ +  +  LS Q +VDCS   GN GC GG + N   Y+
Sbjct: 141 DQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYI 200

Query: 175 QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
           +  GG+  E+ YPY+     C F +  I      ++ +P  DE  +   +ATVGP+AV+I
Sbjct: 201 KDNGGIDTEKSYPYEAIDDSCHFNKGAIGATDRGFTDIPQGDEKKMAEAVATVGPVAVAI 260

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM 289
           +AS  +FQ Y+ G+Y++  C +  ++H +L+VGY  +      W++KN W   WGD G++
Sbjct: 261 DASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGYGTDESGDDYWLVKNSWGTTWGDKGFI 320

Query: 290 -YLKRGNNRCGIANYAVYALI 309
             L+  +N+CGIA+ + Y L+
Sbjct: 321 KMLRNKDNQCGIASASSYPLV 341


>gi|195334204|ref|XP_002033774.1| GM21500 [Drosophila sechellia]
 gi|194125744|gb|EDW47787.1| GM21500 [Drosophila sechellia]
          Length = 341

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 171/321 (53%), Gaps = 21/321 (6%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLH-WQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           +EW    +  +K Y+ D     T+ + +L  +  N  KI  HNQ   +G   + L  N  
Sbjct: 27  EEWHTFKLEHRKNYQDD-----TEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKY 81

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDW 114
           +DL    + + M    ++ + + L  + ES + V         +P  +DWR KG +T   
Sbjct: 82  ADLLHHEFRQLMNGFNYT-LHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVK 140

Query: 115 NQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174
           +Q  CG+C+AFS   A++GQ F+ +  +  LS Q +VDCS   GN GC GG + N   Y+
Sbjct: 141 DQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYI 200

Query: 175 QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
           +  GG+  E+ YPY+     C F +  I      ++ +P  DE  +   +ATVGP+AV+I
Sbjct: 201 KDNGGIDTEKSYPYEAIDDSCHFNKGTIGATDRGFTDIPQGDEKKMAEAVATVGPVAVAI 260

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM 289
           +AS  +FQ Y+ G+Y++  C +  ++H +L+VG+  +      W++KN W   WGD G++
Sbjct: 261 DASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFI 320

Query: 290 -YLKRGNNRCGIANYAVYALI 309
             L+   N+CGIA+ + Y L+
Sbjct: 321 KMLRNKENQCGIASASSYPLV 341


>gi|205689966|sp|A6NFJ7.3|CATL6_HUMAN RecName: Full=Putative cathepsin L-like protein 6
          Length = 277

 Score =  187 bits (475), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 106/281 (37%), Positives = 153/281 (54%), Gaps = 17/281 (6%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL--I 98
           I  HNQE  QG H +T+  N   D+    + + M    + + R+      +  E +L  I
Sbjct: 2   IEQHNQEYSQGKHSFTMAMNAFGDMTNEEFRQVMNGFQYQKHRK----GKQFQERLLPEI 57

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ+F  T ++  L+ Q +VDCS   G
Sbjct: 58  PTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQG 117

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   YVQ  GGL  E  YPY+GK   C++       + + +  +P Q E 
Sbjct: 118 NEGCNGGFMDNPFRYVQENGGLDSEASYPYEGKVKTCRYNPKYSAANDTGFVDIPSQ-EK 176

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS------ 272
            L   +ATVGPI+V+  AS  +FQ Y  GIY +  C  + ++HAMLLVGY+         
Sbjct: 177 DLAKAVATVGPISVAAGASHVSFQFYKKGIYFEPRCDPEGLDHAMLLVGYSYEGADSDNN 236

Query: 273 --WILKN-WWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
             W++KN     +WG +GY+ + K   N CGIA  A Y  +
Sbjct: 237 KYWLVKNSSEGKNWGMDGYIKMAKDRRNNCGIATAASYPTV 277


>gi|118123|sp|P25782.1|CYSP2_HOMAM RecName: Full=Digestive cysteine proteinase 2; Flags: Precursor
 gi|11053|emb|CAA45128.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 323

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 6/301 (1%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + KY + Y     DS +++ ++ N K I   N++ + G   + L  N   D+    +   
Sbjct: 24  KGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAV 83

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           M      R     V  P+  E+      +DWR KG +TP  +Q  CG+C+AFS   +++G
Sbjct: 84  MKGNIPRRSAPVSVFYPK-KETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEG 142

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q F  T  +  L+ QQ+VDCS   G  GC GG + +  +Y++   G+  E  YPY+ +  
Sbjct: 143 QHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDG 202

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+F   ++    S  + +    E  L+  +  +GPI+V+I+A+  +FQ Y+SG+Y + +
Sbjct: 203 SCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPS 262

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           C+  Y++HA+L VGY     ++ W++KN W+  WGD GY+ + R  NN CGIA  A Y L
Sbjct: 263 CSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVASYPL 322

Query: 309 I 309
           +
Sbjct: 323 V 323


>gi|45384464|ref|NP_990302.1| cathepsin K precursor [Gallus gallus]
 gi|25089842|sp|Q90686.1|CATK_CHICK RecName: Full=Cathepsin K; AltName: Full=JTAP-1; Flags: Precursor
 gi|1017831|gb|AAC59739.1| JTAP-1 [Gallus gallus]
          Length = 334

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 146/271 (53%), Gaps = 20/271 (7%)

Query: 48  AQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPD------- 100
           A+ G H + L  N+L D+     ++ MT L   R R      P  N ++ +PD       
Sbjct: 69  ARLGKHSFQLAMNYLGDMTSEEVVRTMTGLRVPRSR------PRPNGTLYVPDWSSRAPA 122

Query: 101 HLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNL 160
            +DWR KG++TP  +Q  CG+C+AFS   A++GQ+ + T ++  LS Q +V C  +S N 
Sbjct: 123 AVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC--VSNNN 180

Query: 161 GCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHAL 220
           GC GG + N   YV+   G+  E+ YPY G+   C +           +  +P  +E AL
Sbjct: 181 GCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQDESCMYSPTGKAAKCRGYREIPEDNEKAL 240

Query: 221 KVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILK 276
           K  +A +GP++V I+AS  +FQ Y+ G+Y D  C  + +NHA+L VGY        WI+K
Sbjct: 241 KRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCNPENINHAVLAVGYGAQKGTKHWIIK 300

Query: 277 NWWSHHWGDNGYMYLKRGNNR-CGIANYAVY 306
           N W   WG+ GY+ L R   + CGIAN A +
Sbjct: 301 NSWGTEWGNKGYVLLARNMKQTCGIANLASF 331


>gi|340370384|ref|XP_003383726.1| PREDICTED: silicatein-like [Amphimedon queenslandica]
          Length = 337

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 168/323 (52%), Gaps = 27/323 (8%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW++     ++K+ K Y     +SK+   W  N   I  HNQ+A   +HG+TL+ NH  
Sbjct: 25  EEWLLW----KEKHGKVYPHGEEESKRLNIWLENKNYIEEHNQKAH--VHGFTLKMNHFG 78

Query: 64  DLHPRHYIK------------EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFIT 111
           DL    Y +            ++  L H+   +   R  + N    +P+ +DWR K  +T
Sbjct: 79  DLTIEEYRQSRYATCYHSPDDDILSLPHNATVKMYSRPDDPN----LPEEVDWRTKNAVT 134

Query: 112 PDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTL 171
              +Q  CG+CYAFS   A++G    +  ++  LS Q +VDCSI  GN GC GG++  + 
Sbjct: 135 GVKDQGQCGSCYAFSAVGALEGAQALAHDKLVHLSEQNIVDCSIPYGNKGCNGGNMYESF 194

Query: 172 NYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIA 231
            Y+    G+ +E+ Y Y G+Q  CKF R  I         +P   E  L+  LAT GP++
Sbjct: 195 RYIIDNDGIDREDGYKYTGRQGQCKFDRKAIGGRQVGIIHIPTGSEAELQSALATAGPVS 254

Query: 232 VSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNG 287
           V+I+ S + F+ Y  G++D+  C++  + HA L++GY +      W++KN W  HWG  G
Sbjct: 255 VAIDGSSNAFRFYEKGVFDEPNCSTTKLTHAGLIIGYGKKKGKPYWLVKNSWGPHWGMKG 314

Query: 288 YMYLKRGN-NRCGIANYAVYALI 309
           Y+ + R   N+CGIA  A +  +
Sbjct: 315 YIMMARNKANQCGIATAASFPTL 337


>gi|410921048|ref|XP_003973995.1| PREDICTED: digestive cysteine proteinase 2-like [Takifugu rubripes]
          Length = 290

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 161/294 (54%), Gaps = 18/294 (6%)

Query: 29  KKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI--------KEMTRLTHS 80
           ++K+ W+ N ++I  +NQ    G   +T+  N   DL  + +          ++ +   +
Sbjct: 2   QRKVIWEGNKQQIEDNNQGFLMGSKHFTMAMNKYGDLTAQEFQVLQGAMIDAQLAKRGKT 61

Query: 81  RIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTS 140
              R L  S +  + ++I    D+R+ G++T   +Q  CG+C+AFS   AI+GQIFK T 
Sbjct: 62  VASRKLRNSAKKFDGMVI----DYRQMGYVTEVKDQGYCGSCWAFSTTGAIEGQIFKKTG 117

Query: 141 EIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRP 200
           ++  LS Q +VDCS   G  GC+G  + N  +YV    GL     YPY      C +   
Sbjct: 118 QLMSLSEQNLVDCSKSYGTYGCSGAWMANAYDYV-VNNGLESTITYPYTSDTQPCYYDSR 176

Query: 201 NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVN 260
             V  I  +  +P  DE AL   +AT+GPI V+I+AS  +F  Y+SGIY++  C  + ++
Sbjct: 177 LAVAHIKDYRFIPKGDEQALADAVATIGPITVAIDASHSSFLFYSSGIYEESNCNPNNLS 236

Query: 261 HAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
           HA+LLVGY     ++ W++KN W   WG+ GYM L R G N CGIA+YA+Y ++
Sbjct: 237 HAVLLVGYGSEGGQDYWLIKNSWGPSWGEGGYMRLIRDGKNPCGIASYALYPIL 290


>gi|82796372|gb|ABB91778.1| cathepsin L [Hymeniacidon perlevis]
          Length = 323

 Score =  187 bits (474), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 159/304 (52%), Gaps = 12/304 (3%)

Query: 15  KKYKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY 70
           + +K ++ KK +D  ++L     WQ N K I  HN  + +   G+TL  N   DL   H 
Sbjct: 23  EDWKNEHNKKYSDDLEELTRYKIWQGNQKIIEVHNANSDK--FGFTLGMNKFGDLES-HE 79

Query: 71  IKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
             EM      + R    +   ++ +      +DWR KG +T   NQ  CG+C+AFS   +
Sbjct: 80  FAEMFNGYMMQARSNSTKVFVADPNYKADPTVDWRTKGAVTGVKNQGQCGSCWAFSTTGS 139

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ F  T ++  LS Q +VDCS   GN GC GG +     Y++  GG+  E  YPY+ 
Sbjct: 140 LEGQHFLKTGKLVSLSEQNLVDCSGKEGNEGCNGGLMDQAFEYIKKNGGIDTEASYPYQA 199

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C+FK  ++    + +  +  +DE+AL   +  +GP++V+I+AS  +FQLY SG+Y 
Sbjct: 200 HDERCRFKASDVGATCTGYVDIKREDENALMQAVEKIGPVSVAIDASHSSFQLYRSGVYY 259

Query: 251 DEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           +  C+   ++H +L +GY        W++KN W   WG  GY+ + R  NN CGIA  A 
Sbjct: 260 ERECSQTALDHGVLAIGYGTEGGSDYWLVKNSWGTDWGMEGYIMMSRNRNNNCGIATEAS 319

Query: 306 YALI 309
           Y  +
Sbjct: 320 YPTV 323


>gi|256082975|ref|XP_002577726.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 1471

 Score =  187 bits (474), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 174/314 (55%), Gaps = 21/314 (6%)

Query: 12  FPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           F + ++K+ Y     ++++   + +N  K+  HN   Q+G   Y +  N  +D    + +
Sbjct: 62  FFKIQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQEGKVTYKMGVNEFTD-KTDYEL 120

Query: 72  KEMT--RLTHSRIR---RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFS 126
           K++   ++T   IR    T +RS    E   +P  +DWR +G +T   NQ  CG+C+AFS
Sbjct: 121 KKLRGYKVTSGAIRHKGSTFIRS----EHTKLPSKVDWRREGAVTDVKNQGQCGSCWAFS 176

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              AI+GQ ++ T+ +  LS QQ+VDCS   GN GC+GG + +   YV+   G+  E  Y
Sbjct: 177 TTGAIEGQHYRKTNRLVNLSEQQLVDCSKSYGNNGCSGGLMNSAFEYVRDNEGIDSEISY 236

Query: 187 PYKG----KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
           PY      + + C F   NI+  ++ +  +   DE AL   +AT GP++V+INA   +F 
Sbjct: 237 PYVSGDGTENNRCLFNASNILAQVTGYVNIHEGDERALMDAVATKGPVSVAINAGLPSFS 296

Query: 243 LYASGIYDDEAC--TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN- 295
           +Y SGIY D  C  T D ++H +L+VGY     R+ W++KN W   WG+ GY+ + +G+ 
Sbjct: 297 MYKSGIYSDTDCEGTLDALDHGVLVVGYGEENGRSYWLIKNSWGEEWGEKGYIKISKGSH 356

Query: 296 NRCGIANYAVYALI 309
           N CG+A+ A Y L+
Sbjct: 357 NMCGVASAASYPLV 370


>gi|359385046|emb|CBY80148.1| silicatein red variant [Tethya aurantium]
          Length = 329

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 162/307 (52%), Gaps = 17/307 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           +K++ K Y     + +K L W SN K I  HN  A     G+TL  NHL D+    Y + 
Sbjct: 29  KKQHGKSYNTNLEELEKHLVWLSNKKYIELHN--ANAATFGFTLAMNHLGDMTDHEYREN 86

Query: 73  ----EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
               + T        +   R P     +  P+ +DWR KG +T   NQ DCGA YAFS  
Sbjct: 87  YLTYQSTNSKSGNYTKVFRREPW----MTFPEAIDWRTKGAVTGIKNQGDCGASYAFSAM 142

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++G    +T ++  LS Q ++DCS+  GN GC GG++     YV    G+  E+ Y +
Sbjct: 143 GALEGINALATGKLTPLSEQNIIDCSVPYGNHGCKGGNMYVAFLYVVANEGVDTEDKYQF 202

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +GKQS C ++       +S    +    E  L+  +A VGP++V+I+A+ + F+ Y SG+
Sbjct: 203 RGKQSSCNYQVQYCGASMSGSVQIKSGSESDLEAAVANVGPVSVAIDAASNAFRFYYSGV 262

Query: 249 YDDEACTSDY--VNHAMLLVGY-TRNS--WILKNWWSHHWGDNGYMYLKRGN-NRCGIAN 302
           YD   C+S Y  +NHAM++ GY   NS  W+ KN W  +WG+ GY+ + R   N+CGIA 
Sbjct: 263 YDSSRCSSGYDSLNHAMVITGYGISNSEYWLAKNSWGENWGEQGYVRMARNKYNQCGIAT 322

Query: 303 YAVYALI 309
            A Y  +
Sbjct: 323 DASYPTL 329


>gi|225709022|gb|ACO10357.1| Cathepsin L precursor [Caligus rogercresseyi]
          Length = 332

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 161/287 (56%), Gaps = 11/287 (3%)

Query: 31  KLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSP 90
           K+H + N  KI  HN EA  G H Y ++ NH  DL    ++  +    +   + +L  S 
Sbjct: 49  KIHME-NSLKISRHNAEAINGKHSYYMKMNHYGDLLHHEFVAMVNGYEYVN-KTSLGGSF 106

Query: 91  ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQV 150
             +++V +P H+DWRE G +TP  NQ  CG+C+AFS   +++GQ F+ T ++  LS Q +
Sbjct: 107 IPSKNVKLPTHVDWREDGAVTPVKNQGQCGSCWAFSSTGSLEGQTFRKTGKLIPLSEQNL 166

Query: 151 VDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFK-RPNIVVDISSW 209
           VDCS   GN GC GG +     Y++   G+  E  YPY+G    C +        DI   
Sbjct: 167 VDCSRKYGNNGCEGGLMDFAFTYIRDNKGIDTEGSYPYEGVGGRCHYDPSKKGSSDIGFV 226

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYT 269
            V    +E  LK  +A+VGP++V+I+AS  +FQ Y+ G+Y +  C+ + ++H +L+VGY 
Sbjct: 227 DVKKGSEEELLK-AVASVGPVSVAIDASHMSFQFYSHGVYFESKCSPENLDHGVLVVGYG 285

Query: 270 RNS------WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
            +       W++KN WS +WGD GY+ + R   N CGIA+ A Y ++
Sbjct: 286 TDENSGEDYWLVKNSWSENWGDQGYIKMARNKKNMCGIASSASYPVV 332


>gi|27960490|gb|AAO27848.1|AF456464_1 cathepsin 3 [Mus musculus]
          Length = 316

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 167/305 (54%), Gaps = 18/305 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + KEM 
Sbjct: 19  KYGKTYSLE-EEGQKRAVWEENMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKEMI 77

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++   +S +   SV +P  ++W+++G++TP   Q  C +C+A S+  AI+GQ+
Sbjct: 78  EIPVPTVKKG--KSVQKRLSVNLPKFINWKKRGYVTPVRTQIACNSCWAISVTGAIEGQM 135

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDC  + G+ GC  GS+ + L Y+   GGL  E  YPY+ KQ  C
Sbjct: 136 FRKTGKLIPLSVQNLVDC--VDGS-GCHAGSVLDALKYLMEKGGLESEATYPYEDKQGSC 192

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N    I+ +  + P +E  L   +A++GPI+V I+A   +F  Y  GIY +  C 
Sbjct: 193 RYNPENSTASITGFEFI-PNNEVDLMNAVASLGPISVIIDAWHESFLFYKRGIYYEPNCN 251

Query: 256 SDY--VNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYA 304
           +    + HA+LLVGY         R  WI+KN     WG+ GYM + K   N CGIA+  
Sbjct: 252 NSLFGLRHAVLLVGYGFIGRESEGRKYWIIKNSLGTKWGNKGYMKIAKDQGNHCGIASLP 311

Query: 305 VYALI 309
           +Y  +
Sbjct: 312 LYPRV 316


>gi|197258086|gb|ACH56227.1| cathepsin S-like cysteine proteinase [Radopholus similis]
          Length = 314

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 164/296 (55%), Gaps = 11/296 (3%)

Query: 23  KKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRI 82
           +++ DS++      +   +  HN   ++G   + L ENHL+ L  R Y + +      R 
Sbjct: 21  QQSLDSERLGALTRSRALVTEHNAAFERGEVSFRLAENHLAHLTEREYKQRLGLRATERP 80

Query: 83  RRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
              +V+      +  +PD +DWR+KG +T   +Q  CG+C+AFS   ++ G   K+T ++
Sbjct: 81  SNKVVKLSAIVGNQSVPDAVDWRKKGLVTEVKDQGQCGSCWAFSTTGSLGGAHAKATGKL 140

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPN 201
             LS Q +VDCS  S N     G +    +Y++  GG+  E  YPY+G +Q  CK+ + N
Sbjct: 141 VSLSEQNLVDCS--SENSVHEHGLMDVAFDYIEENGGIDTERSYPYRGYEQYRCKYSKRN 198

Query: 202 IVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVN- 260
           +   ++S+  LP  DE  LK+ +AT GPI+V+I+AS  +FQLY SG+Y D+ C +   N 
Sbjct: 199 VGATMASYVDLPSGDEQELKIAVATQGPISVAIDASSDSFQLYESGVYKDKQCGNRRSNL 258

Query: 261 -HAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
            H +LLVGY  +      WI+KN WS  WG+ GY+ + R N N CGIA  A Y  +
Sbjct: 259 DHGVLLVGYGTDPKHGDYWIVKNSWSAAWGEKGYIRMARNNRNMCGIATMASYPQV 314


>gi|12837902|dbj|BAB23995.1| unnamed protein product [Mus musculus]
          Length = 332

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 166/305 (54%), Gaps = 18/305 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + KEM 
Sbjct: 35  KYGKTYSLE-EEGQKRAVWEENMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKEMI 93

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++   +S +   SV +P  ++W+++G++TP   Q  C +C+A S+  AI+GQ+
Sbjct: 94  EIPVPTVKKG--KSVQKRLSVNLPKFINWKKRGYVTPARTQIACNSCWAISVTGAIEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDC  + G+ GC  GS+ ++  Y+   GGL  E  YPY+ KQ  C
Sbjct: 152 FRKTGQLIPLSVQNLVDC--VDGS-GCHAGSVLDSFKYLMEKGGLESEATYPYEDKQGSC 208

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N    I+ +  + P +E  L   +A++GPI+V I+A   +F  Y  GIY +  C 
Sbjct: 209 RYNPENSTASITGFEFI-PNNEVDLMSAVASLGPISVVIDAWHESFLFYKRGIYYEPNCN 267

Query: 256 SDY--VNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYA 304
           +    + HA+LLVGY         R  WI+KN     WG  GYM + K   N CGIA+  
Sbjct: 268 NSLFALRHAVLLVGYGFIGRESEGRKYWIIKNSLGTKWGYKGYMKIAKDQGNHCGIASLP 327

Query: 305 VYALI 309
           V+  +
Sbjct: 328 VFPRV 332


>gi|23344734|gb|AAN28680.1| cathepsin L [Theromyzon tessulatum]
          Length = 351

 Score =  186 bits (473), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 162/306 (52%), Gaps = 14/306 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           ++ K Y     +S +K  + +N+K I  HN     G   +T+  N  +D+    + + M 
Sbjct: 47  EHNKVYVGIEEESLRKTIFATNYKFIKDHNALHATGEKSFTVGVNEFADMTVHEFAQMMN 106

Query: 76  RL--THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
            L    +R+  +   SP  N    +P  +DWR KG ++   NQ  CG+C+AFS   +++G
Sbjct: 107 GLKPDSTRVSGSTYLSP--NIDAPLPVEVDWRTKGLVSEVKNQGSCGSCWAFSTTGSLEG 164

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q  + T  + +LS Q +VDCS   GN GC GG + N   Y++   G+  EE YPY G+  
Sbjct: 165 QHMRKTGTMVDLSEQNLVDCSTSYGNDGCNGGLMTNAFKYIKDNKGIDTEEAYPYAGRDG 224

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            CKFK+  +   ++ +  +P  +E  L+  LATVGP++V+I+A+  +F LY SG+YD+  
Sbjct: 225 DCKFKKNKVGATVTGFVEIPAGNEKKLQEALATVGPVSVAIDANHQSFMLYKSGVYDEPE 284

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG------NNRCGIANY 303
           C S  ++H +L VGY     ++ +I+KN W   WG+ GY+              CGI   
Sbjct: 285 CDSAQLDHGVLAVGYGSIHGKDYYIVKNSWGTTWGEQGYIRFSTTAVPDAIGGICGILLD 344

Query: 304 AVYALI 309
           A Y +I
Sbjct: 345 ASYPVI 350


>gi|350412176|ref|XP_003489564.1| PREDICTED: cathepsin L-like [Bombus impatiens]
          Length = 343

 Score =  186 bits (473), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 166/321 (51%), Gaps = 16/321 (4%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + N+EW    +   K YK D  ++    + K+   + HK I  HN   +     Y L+ N
Sbjct: 23  LVNQEWTTFKMEHNKVYKNDIEERF---RMKIFMDNKHK-IAKHNGNYEMKKVSYKLKMN 78

Query: 61  HLSDLHPRHYIKEMTRLTHS------RIRRTLVRSPESNESVLIPDHLDWREKGFITPDW 114
              D+    ++  +     S        R  +  S     +V++P  +DWRE G +TP  
Sbjct: 79  KYGDMLHHEFVNTLNGFNKSINTQLRSERLPIGASFIEPANVVLPKTVDWREHGAVTPVK 138

Query: 115 NQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174
           +Q  CG+C++FS   A++GQ F+ T  +  LS Q ++DCS   GN GC GG +     Y+
Sbjct: 139 DQGHCGSCWSFSATGALEGQHFRRTGILIPLSEQNLIDCSGKYGNNGCNGGLMDQAFQYI 198

Query: 175 QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
           +   GL  E  YPY+ +   C++   N       +  +P  +E  LK  +AT+GP++V+I
Sbjct: 199 KDNKGLDTEVTYPYEAENDKCRYNAANSGARDVGYVDIPQGNEKKLKAAVATIGPVSVAI 258

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM 289
           +AS  +FQ Y+ G+Y +  C+S+ ++H +L VGY  +      W++KN W   WGDNGY+
Sbjct: 259 DASHQSFQFYSEGVYYEPECSSENLDHGVLAVGYGTDENGQDYWLVKNSWGETWGDNGYI 318

Query: 290 YLKRGN-NRCGIANYAVYALI 309
            + R   N CGIA+ A Y L+
Sbjct: 319 KMARNKLNHCGIASTASYPLV 339


>gi|322799749|gb|EFZ20954.1| hypothetical protein SINV_06041 [Solenopsis invicta]
          Length = 337

 Score =  186 bits (473), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 166/322 (51%), Gaps = 21/322 (6%)

Query: 1   MTNKEWIIIFIFPQKKYK----KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYT 56
           + + EW I  +   K YK    + YR K         +  N +KI  HN++ +     Y 
Sbjct: 24  ILDAEWFIFKLHHNKVYKSPVEEGYRMKI--------YMDNKRKIAEHNRKYELNEVTYK 75

Query: 57  LRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPE--SNESVLIPDHLDWREKGFITPDW 114
           L  N   D+    ++  +     S             S  +V +PD +DW ++G +T   
Sbjct: 76  LGMNKYGDMLHHEFVNTLNGFNKSVTAGIETEGVTFISPANVKLPDEVDWTKQGAVTAVK 135

Query: 115 NQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174
           +Q  CG+C+AFS   A++GQ F+ST  +  LS Q ++DCS   GN GC GG +     Y+
Sbjct: 136 DQGHCGSCWAFSSTGALEGQHFRSTGYLVSLSEQNLIDCSGKYGNNGCNGGLMDYAFQYI 195

Query: 175 QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
           +   GL  E+ YPY+ +   C++   N       +  +P  DE  LK  +AT+GPI+V+I
Sbjct: 196 KDNKGLDTEKTYPYEAENDRCRYNPRNSGATDKGYVDIPQGDEEKLKAAVATIGPISVAI 255

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS------WILKNWWSHHWGDNGY 288
           +AS  +FQLY+ G+Y D  C+++ ++H +L+VGY  +       W++KN W   WG  GY
Sbjct: 256 DASHESFQLYSEGVYYDPDCSAENLDHGVLIVGYGTDETSGHDYWLVKNSWGKTWGQKGY 315

Query: 289 MYLKRG-NNRCGIANYAVYALI 309
           + + R  NN CGIA+ A Y L+
Sbjct: 316 IKMARNKNNHCGIASSASYPLV 337


>gi|332376957|gb|AEE63618.1| unknown [Dendroctonus ponderosae]
          Length = 318

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 163/298 (54%), Gaps = 14/298 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ K Y  +  ++K+   +  N + I  HN     GL  Y    N  +DL    +   +T
Sbjct: 31  KHSKSYSNQVEEAKRLAIFTENLRDIEEHNALYAAGLVSYNKSVNQFTDLTIDEFKAYLT 90

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
              HS+   TL   P     + +P  LDWR +G++T   +Q DCG+C+AFS+  + +G  
Sbjct: 91  L--HSK--PTLNTVPYVRTGLQVPTTLDWRSQGYVTGVKDQGDCGSCWAFSVVGSTEGAY 146

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           +KST ++  LS QQ++DC+  + N GC GG L  T  YVQ   GL+ E  YPY G+   C
Sbjct: 147 YKSTGKLVSLSEQQLIDCT-TNVNDGCDGGYLEETFPYVQQT-GLVSESSYPYTGRDGNC 204

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           +    ++V  +S + +L    E  L   + +VGP++V+++A+      YASG+Y+   C+
Sbjct: 205 RISESDVVTKVSKYVLLG--GEADLLEAVGSVGPVSVAMDAT--YIYSYASGVYESSLCS 260

Query: 256 SDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
              +NH +L+VGY     ++ W++KN W + WG+ GY+ L RG N CGIA   VY +I
Sbjct: 261 LYSLNHGVLVVGYGTQDGKDYWLIKNSWGNTWGEQGYLKLLRGTNECGIAEDDVYPII 318


>gi|19424144|ref|NP_081182.2| cathepsin 3 precursor [Mus musculus]
 gi|339715188|ref|NP_473433.2| cathepsin 3 precursor [Mus musculus]
 gi|15418824|gb|AAK58450.1| cathepsin-3 precursor [Mus musculus]
 gi|68534882|gb|AAH99388.1| Cts3 protein [Mus musculus]
 gi|148669361|gb|EDL01308.1| mCG114648, isoform CRA_a [Mus musculus]
          Length = 332

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 166/305 (54%), Gaps = 18/305 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + KEM 
Sbjct: 35  KYGKTYSLE-EEGQKRAVWEENMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKEMI 93

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++   +S +   SV +P  ++W+++G++TP   Q  C +C+A S+  AI+GQ+
Sbjct: 94  EIPVPTVKKG--KSVQKRLSVNLPKFINWKKRGYVTPVRTQIACNSCWAISVTGAIEGQM 151

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDC  + G+ GC  GS+ ++  Y+   GGL  E  YPY+ KQ  C
Sbjct: 152 FRKTGQLIPLSVQNLVDC--VDGS-GCHAGSVLDSFKYLMEKGGLESEATYPYEDKQGSC 208

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N    I+ +  + P +E  L   +A++GPI+V I+A   +F  Y  GIY +  C 
Sbjct: 209 RYNPENSTASITGFEFI-PNNEVDLMSAVASLGPISVVIDAWHESFLFYKRGIYYEPNCN 267

Query: 256 SDY--VNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYA 304
           +    + HA+LLVGY         R  WI+KN     WG  GYM + K   N CGIA+  
Sbjct: 268 NSLFALRHAVLLVGYGFIGRESEGRKYWIIKNSLGTKWGYKGYMKIAKDQGNHCGIASLP 327

Query: 305 VYALI 309
           V+  +
Sbjct: 328 VFPRV 332


>gi|195484843|ref|XP_002090843.1| GE12574 [Drosophila yakuba]
 gi|194176944|gb|EDW90555.1| GE12574 [Drosophila yakuba]
          Length = 341

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 168/323 (52%), Gaps = 25/323 (7%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLH-WQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           +EW    +  +K Y+ D     T+ + +L  +  N  KI  HNQ   +G   + L  N  
Sbjct: 27  EEWHTFKLEHRKNYQDD-----TEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKY 81

Query: 63  SDLHPRHYIKEMT----------RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITP 112
           +DL    + + M           R T    +     SP     V +P  +DWR KG +T 
Sbjct: 82  ADLLHHEFRQLMNGFNYTLHKQLRATDDSFKGVTFISPAH---VTLPKSVDWRSKGAVTA 138

Query: 113 DWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLN 172
             +Q  CG+C+AFS   A++GQ F+ +  +  LS Q +VDCS   GN GC GG + N   
Sbjct: 139 VKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFR 198

Query: 173 YVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAV 232
           Y++  GG+  E+ YPY+     C F +  I      ++ +P  DE  +   +ATVGP++V
Sbjct: 199 YIKDNGGIDTEKSYPYEAIDDSCHFNKGTIGATDRGFTDIPQGDEKKMAEAVATVGPVSV 258

Query: 233 SINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNG 287
           +I+AS  +FQ Y+ G+Y++  C +  ++H +L+VG+  +      W++KN W   WGD G
Sbjct: 259 AIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGDDYWLVKNSWGTTWGDKG 318

Query: 288 YM-YLKRGNNRCGIANYAVYALI 309
           ++  L+  +N+CGIA+ + Y L+
Sbjct: 319 FIKMLRNKDNQCGIASASSYPLV 341


>gi|24653516|ref|NP_725347.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|24653518|ref|NP_725348.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|1658527|gb|AAB18345.1| cysteine proteinase 1 [Drosophila melanogaster]
 gi|2305221|gb|AAB65749.1| cysteine proteinase-1 [Drosophila melanogaster]
 gi|7303249|gb|AAF58311.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|21627210|gb|AAM68566.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|54650754|gb|AAV36956.1| LP06554p [Drosophila melanogaster]
 gi|220951982|gb|ACL88534.1| Cp1-PA [synthetic construct]
          Length = 341

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 167/308 (54%), Gaps = 15/308 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++K+Y+ +  +  +   +  N  KI  HNQ   +G   + L  N  +DL    + + M 
Sbjct: 35  EHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMN 94

Query: 76  RLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              ++ + + L  + ES + V         +P  +DWR KG +T   +Q  CG+C+AFS 
Sbjct: 95  GFNYT-LHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSS 153

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++GQ F+ +  +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 154 TGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYP 213

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+     C F +  +      ++ +P  DE  +   +ATVGP++V+I+AS  +FQ Y+ G
Sbjct: 214 YEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEG 273

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM-YLKRGNNRCGIA 301
           +Y++  C +  ++H +L+VG+  +      W++KN W   WGD G++  L+   N+CGIA
Sbjct: 274 VYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIA 333

Query: 302 NYAVYALI 309
           + + Y L+
Sbjct: 334 SASSYPLV 341


>gi|195583187|ref|XP_002081405.1| GD10995 [Drosophila simulans]
 gi|194193414|gb|EDX06990.1| GD10995 [Drosophila simulans]
          Length = 341

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 171/321 (53%), Gaps = 21/321 (6%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLH-WQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           +EW    +  +K Y+ D     T+ + +L  +  N  KI  HNQ   +G   + L  N  
Sbjct: 27  EEWHTFKLEHRKNYQDD-----TEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKY 81

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDW 114
           +DL    + + M    ++ + + L  + ES + V         +P  +DWR KG +T   
Sbjct: 82  ADLLHHEFRQLMNGFNYT-LHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVK 140

Query: 115 NQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174
           +Q  CG+C+AFS   A++GQ F+ +  +  LS Q +VDCS   GN GC GG + N   Y+
Sbjct: 141 DQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYI 200

Query: 175 QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
           +  GG+  E+ YPY+     C F +  I      ++ +P  DE  +   +ATVGP++V+I
Sbjct: 201 KDNGGIDTEKSYPYEAIDDSCHFNKGTIGATDRGFTDIPQGDEKKMAEAVATVGPVSVAI 260

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM 289
           +AS  +FQ Y+ G+Y++  C +  ++H +L+VG+  +      W++KN W   WGD G++
Sbjct: 261 DASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGDDYWLVKNSWGTTWGDKGFI 320

Query: 290 -YLKRGNNRCGIANYAVYALI 309
             L+   N+CGIA+ + Y L+
Sbjct: 321 KMLRNKENQCGIASASSYPLV 341


>gi|148669362|gb|EDL01309.1| mCG114648, isoform CRA_b [Mus musculus]
          Length = 333

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 166/305 (54%), Gaps = 18/305 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  +  + +K+  W+ N KKI  HN E   G HG+T+  N   D+    + KEM 
Sbjct: 36  KYGKTYSLE-EEGQKRAVWEENMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKEMI 94

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            +    +++   +S +   SV +P  ++W+++G++TP   Q  C +C+A S+  AI+GQ+
Sbjct: 95  EIPVPTVKKG--KSVQKRLSVNLPKFINWKKRGYVTPVRTQIACNSCWAISVTGAIEGQM 152

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F+ T ++  LS+Q +VDC  + G+ GC  GS+ ++  Y+   GGL  E  YPY+ KQ  C
Sbjct: 153 FRKTGQLIPLSVQNLVDC--VDGS-GCHAGSVLDSFKYLMEKGGLESEATYPYEDKQGSC 209

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N    I+ +  + P +E  L   +A++GPI+V I+A   +F  Y  GIY +  C 
Sbjct: 210 RYNPENSTASITGFEFI-PNNEVDLMSAVASLGPISVVIDAWHESFLFYKRGIYYEPNCN 268

Query: 256 SDY--VNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYA 304
           +    + HA+LLVGY         R  WI+KN     WG  GYM + K   N CGIA+  
Sbjct: 269 NSLFALRHAVLLVGYGFIGRESEGRKYWIIKNSLGTKWGYKGYMKIAKDQGNHCGIASLP 328

Query: 305 VYALI 309
           V+  +
Sbjct: 329 VFPRV 333


>gi|255522980|gb|ACU12382.1| RE21773p [Drosophila melanogaster]
          Length = 375

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 167/308 (54%), Gaps = 15/308 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++K+Y+ +  +  +   +  N  KI  HNQ   +G   + L  N  +DL    + + M 
Sbjct: 69  EHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMN 128

Query: 76  RLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              ++ + + L  + ES + V         +P  +DWR KG +T   +Q  CG+C+AFS 
Sbjct: 129 GFNYT-LHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSS 187

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++GQ F+ +  +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 188 TGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYP 247

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+     C F +  +      ++ +P  DE  +   +ATVGP++V+I+AS  +FQ Y+ G
Sbjct: 248 YEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEG 307

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM-YLKRGNNRCGIA 301
           +Y++  C +  ++H +L+VG+  +      W++KN W   WGD G++  L+   N+CGIA
Sbjct: 308 VYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIA 367

Query: 302 NYAVYALI 309
           + + Y L+
Sbjct: 368 SASSYPLV 375


>gi|93279455|pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor
          Length = 215

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 7/213 (3%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +D+R+KG++TP  NQ  CG+C+AFS   A++GQ+ K T ++  LS Q +VDC  +S 
Sbjct: 2   PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSE 59

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   YVQ   G+  E+ YPY G+   C +           +  +P  +E 
Sbjct: 60  NDGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEK 119

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWI 274
           ALK  +A VGP++V+I+AS  +FQ Y+ G+Y DE C+SD +NHA+L VGY        WI
Sbjct: 120 ALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNLNHAVLAVGYGIQKGNKHWI 179

Query: 275 LKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           +KN W   WG+ GY+ + R  NN CGIAN A +
Sbjct: 180 IKNSWGESWGNKGYILMARNKNNACGIANLASF 212


>gi|24653514|ref|NP_523735.2| cysteine proteinase-1, isoform C [Drosophila melanogaster]
 gi|118572624|sp|Q95029.2|CATL_DROME RecName: Full=Cathepsin L; AltName: Full=Cysteine proteinase 1;
           Contains: RecName: Full=Cathepsin L heavy chain;
           Contains: RecName: Full=Cathepsin L light chain; Flags:
           Precursor
 gi|21627209|gb|AAM68565.1| cysteine proteinase-1, isoform C [Drosophila melanogaster]
          Length = 371

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 167/308 (54%), Gaps = 15/308 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++K+Y+ +  +  +   +  N  KI  HNQ   +G   + L  N  +DL    + + M 
Sbjct: 65  EHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMN 124

Query: 76  RLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              ++ + + L  + ES + V         +P  +DWR KG +T   +Q  CG+C+AFS 
Sbjct: 125 GFNYT-LHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSS 183

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++GQ F+ +  +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 184 TGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYP 243

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+     C F +  +      ++ +P  DE  +   +ATVGP++V+I+AS  +FQ Y+ G
Sbjct: 244 YEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEG 303

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM-YLKRGNNRCGIA 301
           +Y++  C +  ++H +L+VG+  +      W++KN W   WGD G++  L+   N+CGIA
Sbjct: 304 VYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIA 363

Query: 302 NYAVYALI 309
           + + Y L+
Sbjct: 364 SASSYPLV 371


>gi|405966500|gb|EKC31778.1| Cathepsin L [Crassostrea gigas]
          Length = 271

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/239 (39%), Positives = 142/239 (59%), Gaps = 7/239 (2%)

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           +++ +R +  L  SP SN   L PD +DWR++G++T   NQ  CG+C++FS   +++GQ 
Sbjct: 35  KMSANRTKGDLYMSP-SNIGDL-PDSVDWRKEGYVTDIKNQGHCGSCWSFSATGSLEGQH 92

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           FK++ ++  LS Q +VDCS   GN GC GG + N   Y++   G+  EE YPY  K   C
Sbjct: 93  FKASKKLVSLSEQNLVDCSQREGNHGCQGGLMDNAFRYIESNKGIDTEESYPYTAKNGFC 152

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
            FK+ N+    + +  +P   E  L+  +ATVGPI+V+I+A   +FQLY  G+Y + AC+
Sbjct: 153 HFKKENVGATDTGYVDIPHMQEDKLQEAVATVGPISVAIDAGHKSFQLYREGVYSEPACS 212

Query: 256 SDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           S  ++H +L VGY   S    W++KN W   WG  GY+ + R  +N CGIA  A Y  +
Sbjct: 213 SSKLDHGVLAVGYGTESGDDYWLVKNSWGTSWGMQGYVMMARNKHNMCGIATQASYPKV 271


>gi|401397136|ref|XP_003879989.1| cathepsin L, related [Neospora caninum Liverpool]
 gi|325114397|emb|CBZ49954.1| cathepsin L, related [Neospora caninum Liverpool]
          Length = 415

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/289 (35%), Positives = 158/289 (54%), Gaps = 26/289 (8%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           Y K Y  +    K+   +++N   IHTHNQ+     + Y+L+ NH  DL    + ++   
Sbjct: 126 YGKSYATEEETQKRYAIFKNNLAYIHTHNQQG----YSYSLKMNHFGDLSREEFRRKYLG 181

Query: 77  LTHSR--------IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
              SR        +   L++   S+    +P  +DWREKG +TP  +Q DCG+C+AFS  
Sbjct: 182 YNKSRNLKSNNLGVATELLKVSPSD----VPSAVDWREKGCVTPVKDQRDCGSCWAFSAT 237

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++G     T E+  LS Q++VDCS+  GN GC+GG + +   YV  +GGL  EE YPY
Sbjct: 238 GALEGAHCAKTGELLSLSEQELVDCSLAEGNQGCSGGEMNDAFQYVVDSGGLCSEEGYPY 297

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
             +   CK +    VV IS +  +P + E A+K  LA   P++++I A    FQ Y  G+
Sbjct: 298 LARDGECK-RACKKVVTISGFKDVPRKSETAMKAALAH-SPVSIAIEADQLPFQFYHEGV 355

Query: 249 YDDEACTSDYVNHAMLLVGY------TRNSWILKNWWSHHWGDNGYMYL 291
           + D +C +D ++H +LLVGY       ++ WI+KN W   WG +GYMY+
Sbjct: 356 F-DASCGTD-LDHGVLLVGYGTDKETKKDFWIMKNSWGSGWGRDGYMYM 402


>gi|405966497|gb|EKC31775.1| Cathepsin L1 [Crassostrea gigas]
          Length = 305

 Score =  186 bits (471), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 160/284 (56%), Gaps = 18/284 (6%)

Query: 3   NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL 62
           + EW +     +++Y+K Y     +++++  W++N   I+ HN E ++G H YTL  N  
Sbjct: 25  DTEWALY----KQEYRKQYLTADEETERRDIWEANLDYINQHNDEFKRGEHSYTLGLNEF 80

Query: 63  SDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLI-----PDHLDWREKGFITPDWNQE 117
           +DL    ++     L    IR     S + +  +++     P  +DWR++G++ P  NQ 
Sbjct: 81  ADLSHEEFL----HLYGGGIRPRDSGSSDPDTDIVVDTSGLPSEVDWRKEGWVGPVGNQF 136

Query: 118 DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177
            CG+C+AF+   A++GQ+   T ++  LS+QQ++DCS   GN GC GG +     Y+   
Sbjct: 137 ACGSCWAFTATGALEGQVRNKTGKLIVLSVQQMMDCSEKWGNHGCEGGLMDAAFKYIHDV 196

Query: 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
           GG+     YPYK  +  CKF    +V  +  +  L P+ E +L V +ATVGPI+ +++AS
Sbjct: 197 GGIESNASYPYKPAEEKCKFNESAVVAKVKGYKDL-PKSEESLMVAVATVGPISAALDAS 255

Query: 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKN 277
             +FQLY SG+YDD  C+S  V+H++++VGY     +  WI KN
Sbjct: 256 HSSFQLYKSGVYDDPNCSSGQVDHSLVVVGYGLMDGKKYWIAKN 299


>gi|261289781|ref|XP_002611752.1| hypothetical protein BRAFLDRAFT_284342 [Branchiostoma floridae]
 gi|229297124|gb|EEN67762.1| hypothetical protein BRAFLDRAFT_284342 [Branchiostoma floridae]
          Length = 327

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 170/315 (53%), Gaps = 11/315 (3%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + N EW +     +K Y + Y  +  +  ++L ++ N K I  HN+EA +GLH + L  N
Sbjct: 18  LMNPEWEVF----KKAYNRVYAAEE-EYARRLIFEDNLKTIQMHNEEADRGLHTFRLGVN 72

Query: 61  HLSDLHPRHYIKEMTR--LTHSRIRRTLVRSPESNESVL--IPDHLDWREKGFITPDWNQ 116
             +D+  + +++ +    L  +   ++        +  L  +PD +DWR+KG++TP  NQ
Sbjct: 73  QYADMTHKEFLENVIGGCLLDTNTSKSTADHVHEYDPTLTDVPDTVDWRDKGYVTPVKNQ 132

Query: 117 EDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQF 176
             CG+C+AFS   +++GQ FK+T+++  LS Q ++DCS   GN GC GG +     Y++ 
Sbjct: 133 AQCGSCWAFSTTGSLEGQHFKATNKLVSLSEQNLMDCSRKEGNQGCQGGLMDQAFKYIKT 192

Query: 177 AGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINA 236
            GG+  EE YPYK K   C ++       +SS++ +  +DE AL+  +ATVGPI+V+I+A
Sbjct: 193 NGGIDTEECYPYKAKNEQCNYQASCSGATLSSYTDVKSKDEDALQQAVATVGPISVAIDA 252

Query: 237 SPHTFQLYASGIYDD-EACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRG- 294
              +FQLY SG         S  +  ++    Y     + +  W   WG+ GY+ + R  
Sbjct: 253 GHSSFQLYHSGKPPSLRRAYSSEIKRSVTKCTYCAQLLLREGRWGESWGEKGYIKMSRNR 312

Query: 295 NNRCGIANYAVYALI 309
           +N CGIA  A Y  +
Sbjct: 313 HNNCGIATQASYPTV 327


>gi|146386731|pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor
           Bound To Cathepsin K
          Length = 215

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 91/213 (42%), Positives = 132/213 (61%), Gaps = 7/213 (3%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +D+R+KG++TP  NQ  CG+C+AFS   A++GQ+ K+T  +  L+ Q +VDC  +S 
Sbjct: 2   PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKATGALLNLAPQNLVDC--VSE 59

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   YVQ   G+  E+ YPY G+   C +           +  +P  +E 
Sbjct: 60  NDGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEA 119

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WI 274
           ALK  +A VGP++V+I+AS  +FQ Y++G+Y DE C+SD +NHA+L VGY   +    WI
Sbjct: 120 ALKRAVAAVGPVSVAIDASLTSFQFYSAGVYYDENCSSDALNHAVLAVGYGIQAGNKHWI 179

Query: 275 LKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           +KN W   WG+ GY+ + R  NN CGIAN A +
Sbjct: 180 IKNSWGESWGNAGYILMARNKNNACGIANLASF 212


>gi|349604730|gb|AEQ00199.1| Cathepsin K-like protein, partial [Equus caballus]
          Length = 219

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 7/213 (3%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +D+R+KG++TP  NQ  CG+C+AFS   A++GQ+ K T ++  LS Q +VDC  +S 
Sbjct: 6   PDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSE 63

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   YVQ   G+  E+ YPY G+   C +           +  +P  +E 
Sbjct: 64  NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPQGNEK 123

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWI 274
           ALK  +A VGP++V+I+AS  +FQ Y+ G+Y DE C SD +NHA+L VGY        WI
Sbjct: 124 ALKRAVARVGPVSVAIDASLTSFQFYSRGVYYDENCNSDNLNHAVLAVGYGIQKGNKHWI 183

Query: 275 LKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           +KN W  +WG+ GY+ + R  NN CGIAN A +
Sbjct: 184 IKNSWGENWGNKGYILMARNKNNACGIANMASF 216


>gi|15593246|gb|AAL02220.1|AF410880_1 cysteine protease CP7 precursor [Frankliniella occidentalis]
          Length = 333

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 156/297 (52%), Gaps = 6/297 (2%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A ++ +   ++ N  +I  HN     G   + +  N  +D+H     +++    
Sbjct: 37  KTYANAAEEAYRAKVFKENAIRIAKHNDRFASGEVTFKVGYNQYADMHTHEVTEKLNGYR 96

Query: 79  HSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKS 138
               + +      SN+S      +DWR KG +TP  +Q  CG+C++FS   +++GQ+F  
Sbjct: 97  SGLKQASAFVHTASNDSWPWSKKVDWRSKGAVTPIKDQGQCGSCWSFSATGSLEGQLFLK 156

Query: 139 TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFK 198
              +  LS Q +VDCS   GN GC GG + +   YV+  GG+  EE YPY  +   C +K
Sbjct: 157 NKNLVSLSEQNLVDCSWDFGNEGCNGGLMDSAFEYVKSYGGIDTEESYPYTAEDGTCLYK 216

Query: 199 RPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDY 258
             N     + +  +  + E AL+  +  VGP++V+I+AS  +FQ+Y SGIY + AC+SD 
Sbjct: 217 AANNAGVNTGYKDVQAKSESALRDAVEKVGPVSVAIDASNWSFQMYTSGIYYEPACSSDS 276

Query: 259 VNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           ++H +L VGY      +  WI+KN W   WG+ GY+ + R   N CGIA  A Y L+
Sbjct: 277 LDHGVLAVGYGSEWPNKEFWIVKNSWGTSWGEEGYIKMARNKKNNCGIATEASYPLV 333


>gi|225579644|gb|ACN93991.1| cathepsin L [Dicentrarchus labrax]
          Length = 316

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/276 (36%), Positives = 149/276 (53%), Gaps = 15/276 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR---TL 86
           +++ W+ N KKI  HN E   G H Y L  NH  D+    + + M        R+   +L
Sbjct: 43  RRMVWEKNLKKIELHNLEHSMGKHTYRLGMNHFGDMTHEEFRQLMNGYKLKAARKFSGSL 102

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E+   P  +DWR+ G++TP  +Q  CG+C+AFS   A++GQ F+ + ++  LS
Sbjct: 103 FMEPNFLEA---PRSVDWRDNGYVTPVKDQGQCGSCWAFSTTGALEGQHFRKSGKLVSLS 159

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI-VVD 205
            Q +VDCS   GN GC GG +     YV+   GL  E+ YPY G         PN    +
Sbjct: 160 EQNLVDCSRPEGNEGCNGGLMDQAFQYVKDNQGLDSEDSYPYLGTDDQPCHYDPNYNSAN 219

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   EHAL   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L+
Sbjct: 220 DTGFVDIPSGKEHALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLV 279

Query: 266 VGY--------TRNSWILKNWWSHHWGDNGYMYLKR 293
           VGY         +  WI+ N WS  WGD GY+YL +
Sbjct: 280 VGYGFEGQDVDGKKYWIVNNSWSEKWGDEGYIYLAK 315


>gi|33242884|gb|AAQ01146.1| cathepsin [Petromyzon marinus]
          Length = 333

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 13/303 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY----IK 72
           Y K Y  +  D+ ++  ++ N K++  HN  A +G   + L  N  SDL    Y    + 
Sbjct: 34  YGKHYGSEQEDAHRRDVFEQNLKRVLQHNLLADEGNVSFHLGINKYSDLELHEYHEKVVG 93

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
               L +   RR       S ++  +P+ +DWR KG++TP   Q  CG+ +AFS   +++
Sbjct: 94  RFWNLRNGTRRRGAPFPLRSMDN--LPEQVDWRLKGYVTPVKEQGLCGSSWAFSATGSLE 151

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F +T  +  LS QQ+VDC+    N GC GG     L Y+    G+  E  YPY+   
Sbjct: 152 GQHFAATGNLTSLSEQQLVDCTKSYYNNGCNGGRSERALQYIIDNNGIDSELSYPYEHAD 211

Query: 193 SICKFKRPNIVVDISSWS-VLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
             C+FK  N+    SS+  V P  +E  L+  +A+VGPIA+++NA   TF+ Y SG++++
Sbjct: 212 GKCRFKPANVATKCSSYQFVEPSSNEEVLRQAVASVGPIAIAMNADLDTFKHYKSGLFNE 271

Query: 252 EACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +C     NHAML+VGY   S    WI+KN W   WG+ GY+Y+ R  +N+CGIA+  +Y
Sbjct: 272 PSCDKS-PNHAMLVVGYGSLSGNDFWIVKNSWGEDWGEKGYIYMIRNKDNQCGIASIGIY 330

Query: 307 ALI 309
            +I
Sbjct: 331 PII 333


>gi|208972990|dbj|BAG74344.1| silicatein-M3 [Ephydatia fluviatilis]
          Length = 326

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 158/301 (52%), Gaps = 7/301 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + +++K Y  +  + ++   W SN K I  HN  + +   GYTL  NH  DL    +   
Sbjct: 28  KGQHQKSYMSELEELERHAIWLSNKKYIEEHNARSNE--FGYTLAINHFGDLTTEEHNAM 85

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
                         +S ++ E V   D +DWR KG +T    Q  CGA YAF+   A++G
Sbjct: 86  YLTYGTGNYTHHGQKSFQAPEGVQYADSIDWRTKGAVTSVKYQGQCGASYAFAATGALEG 145

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
               +  +   LS Q ++DCS+  GN GC+GG     + YV   GG+  E  Y ++GKQS
Sbjct: 146 ASALANDKQVILSEQNIIDCSVPYGNHGCSGGDTYTAMKYVIDNGGIDTESSYSFQGKQS 205

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C++   N     +    +    E  L   +ATVGP+AV+++A+ + F+ Y SG++D  +
Sbjct: 206 SCQYSSKNSGASATGVISITSGSETDLLAAVATVGPVAVAVDANTNAFRFYQSGVFDSSS 265

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYAL 308
           C++   NHAML+ GY     ++ W++KN WS +WGDNGY+ + R   N+C IA  A+Y  
Sbjct: 266 CSNTKPNHAMLVTGYGSYNGKDYWLVKNSWSKNWGDNGYILMVRNKYNQCAIATDALYPT 325

Query: 309 I 309
           +
Sbjct: 326 L 326


>gi|383849553|ref|XP_003700409.1| PREDICTED: cathepsin L-like [Megachile rotundata]
          Length = 343

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 177/323 (54%), Gaps = 20/323 (6%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + N+EWI      + ++KK Y+ +A +  +   +  N  +I  HN + +     Y L+ N
Sbjct: 23  LVNQEWINF----KMEHKKCYKHEAEERLRMKIYMKNKLQIAQHNCDYELKKVTYRLKIN 78

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTL--VRSPESNE-----SVLIPDHLDWREKGFITPD 113
              D+   H  K M    +  I  TL   R P         +V +P  +DWR+ G +T  
Sbjct: 79  KYGDM-LNHEFKNMLNGYNRTINHTLRNERLPVGAAFIEPCNVELPKMVDWRKCGAVTEV 137

Query: 114 WNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNY 173
            +Q  CG+C+AFS   +++GQ F+ T  +  LS Q ++DCS   GN GC GG +    +Y
Sbjct: 138 KDQGHCGSCWAFSATGSLEGQHFRRTGVLVSLSEQNLIDCSGSYGNNGCNGGLMDQAFSY 197

Query: 174 VQFAGGLMKEEDYPYKGKQSICKF-KRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAV 232
           ++   GL  E+ YPY+G+   C++ KR +   D+  +  +P  DE  LK  +ATVGP++V
Sbjct: 198 IKDNKGLDTEKTYPYEGEDDKCRYDKRSSGASDV-GFVDIPVGDEQKLKAAVATVGPVSV 256

Query: 233 SINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNG 287
           +I+AS  +FQ Y+ GIY +  C+S  ++H +L+VGY      R+ WI+KN W   WG+ G
Sbjct: 257 AIDASHQSFQFYSDGIYFEPECSSTNLDHGVLVVGYGTDEEGRDYWIVKNSWGESWGEKG 316

Query: 288 YMYLKRG-NNRCGIANYAVYALI 309
           Y+ + R  +N CGIA+ A Y ++
Sbjct: 317 YIKMARNIDNHCGIASSASYPIV 339


>gi|326430490|gb|EGD76060.1| cysteine proteinase [Salpingoeca sp. ATCC 50818]
          Length = 448

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 161/301 (53%), Gaps = 12/301 (3%)

Query: 9   IFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPR 68
           +F   + K+ K Y     ++++   +  N   I+ HN EA +G+H +T+  N  +DL   
Sbjct: 29  LFDAFKTKFNKVYESAEEEARRFSVFSQNIDFINRHNAEAARGVHTHTVDVNQFADLTNE 88

Query: 69  HYIKEMTRLTHSRIRRTLVRSPESNESVLI---PDHLDWREKGFITPDWNQEDCGACYAF 125
            Y     R  + R   T +   E  E  L       +DWR+KG +TP  NQ  CG+C++F
Sbjct: 89  EY-----RQLYLRPYPTELLGRERQEVWLDGPNAGSVDWRQKGAVTPIKNQGQCGSCWSF 143

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           S   +++G    +T  +  LS QQ+VDCS   GN GC GG + N   Y+   GGL  E+D
Sbjct: 144 STTGSVEGAHAIATGNLVSLSEQQLVDCSGSFGNQGCNGGLMDNAFKYIISNGGLDTEQD 203

Query: 186 YPYKGKQSIC-KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
           YPY  +  +C K K     V IS +  +P  +E  L   +   GP++V+I A   +FQ+Y
Sbjct: 204 YPYTARDGVCDKSKESKHAVSISGYKDVPQNNEDQLAAAVEK-GPVSVAIEADQQSFQMY 262

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYA 304
           +SG++     T+  ++H +L+VGYT + WI+KN W   WGD GY+ +KRG +  GI   A
Sbjct: 263 SSGVFSGPCGTN--LDHGVLVVGYTSDYWIVKNSWGASWGDQGYIMMKRGVSSAGICGIA 320

Query: 305 V 305
           +
Sbjct: 321 M 321


>gi|259089092|ref|NP_001158584.1| Cathepsin L precursor [Oncorhynchus mykiss]
 gi|225705034|gb|ACO08363.1| Cathepsin L precursor [Oncorhynchus mykiss]
          Length = 330

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 157/292 (53%), Gaps = 9/292 (3%)

Query: 24  KATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIR 83
           K  +  +++ W++N + I  HN EA+ G H +TL  N   D+  + Y   +T      ++
Sbjct: 42  KVDEGFRRMIWETNQRLIRQHNLEAEIGKHTFTLGMNQFGDMMNKEYNALLTANDAEEVK 101

Query: 84  RTLVRSPESNESVLI---PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTS 140
            +L   P S  +  +   P+  D R+ G++TP  NQ  CG+CYAF+   A +GQ+FK T 
Sbjct: 102 -SLDGIPLSKWNCSLSAAPETWDRRQYGYVTPVKNQGSCGSCYAFAAVGAPEGQLFKQTG 160

Query: 141 EIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRP 200
            +  LS Q +VDCS    N GC GG      +YV    G+M E  YPY  +   C+++  
Sbjct: 161 TLLPLSEQNLVDCSGDYHNNGCDGGLAMRCFSYVS-DHGIMSERKYPYTAEVGPCQYQNA 219

Query: 201 NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVN 260
                   ++ +P  DE   + TL  VGPIAVS+NA+  +F+ Y  G+  +  C++   N
Sbjct: 220 TKEAWCKGFNRVPSLDEKVFRDTLYEVGPIAVSVNATHPSFKFYKDGVLYEPDCSTR-TN 278

Query: 261 HAMLLVGYTR---NSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           HA+L VGY     + WI+KN W   WG +GY+ + RG NRCGIA   VY ++
Sbjct: 279 HAVLAVGYGSSYLDYWIVKNSWGTGWGRDGYILMARGYNRCGIARRPVYPIM 330


>gi|315364648|pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A
           Ketoamide Warhead
          Length = 213

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 7/212 (3%)

Query: 100 DHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGN 159
           D +D+R+KG++TP  NQ  CG+C+AFS   A++GQ+ K T ++  LS Q +VDC  +S N
Sbjct: 1   DSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSEN 58

Query: 160 LGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHA 219
            GC GG + N   YVQ   G+  E+ YPY G++  C +           +  +P  +E A
Sbjct: 59  DGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKA 118

Query: 220 LKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWIL 275
           LK  +A VGP++V+I+AS  +FQ Y+ G+Y DE+C SD +NHA+L VGY        WI+
Sbjct: 119 LKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWII 178

Query: 276 KNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           KN W  +WG+ GY+ + R  NN CGIAN A +
Sbjct: 179 KNSWGENWGNKGYILMARNKNNACGIANLASF 210


>gi|392876478|gb|AFM87071.1| cathepsin L1 [Callorhinchus milii]
          Length = 331

 Score =  184 bits (468), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 164/303 (54%), Gaps = 19/303 (6%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           ++K Y     ++ +++ WQ+N ++I THN E ++    + +  NH  DL       E  R
Sbjct: 33  HRKQYANLVEETNRRIIWQANLQEIKTHNMEYKRRRVSFKMGMNHFGDLSS----SEFQR 88

Query: 77  LTH--SRIRRTLVRSPESNESVL------IPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           + H  S  +R+ V   +  +  L      I   +DWR+KG++TP + Q  CG+CY F+  
Sbjct: 89  IYHHQSFKQRSFVYIIQEVKPFLPFNNSFIVRSVDWRKKGYVTPVYYQGTCGSCYGFAAT 148

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            +++  IFK   ++ +LS Q +VDCS   GNLGC+GGS+     +V    G+   + YPY
Sbjct: 149 GSLEAMIFKKYGKLIKLSEQSIVDCSSYYGNLGCSGGSIIRAYKFV-MENGIQSADTYPY 207

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
             K   C+  + + V  +S + +    +E AL  T++TVGP+AV ++    ++Q Y SGI
Sbjct: 208 TAKAGTCRHNKSSTVATMSHY-IKVHSNEEALAQTVSTVGPVAVCVHTKTRSWQFYKSGI 266

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYL-KRGNNRCGIANY 303
             D  C +   +H ML+VG+        WI+KN W   WG  GY+++ K  NN CGI++Y
Sbjct: 267 LYDPLCKNYTYDHGMLVVGFGIQKDEYYWIVKNSWGSRWGMKGYIWIAKDRNNHCGISSY 326

Query: 304 AVY 306
           A Y
Sbjct: 327 ATY 329


>gi|110349473|gb|ABG73217.1| cathepsin L 1 precursor [Diaprepes abbreviatus]
          Length = 322

 Score =  184 bits (467), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 163/299 (54%), Gaps = 12/299 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           K+ K Y+ +  ++ +   ++ N + I  HN   +QGL  Y    N  +D+    +     
Sbjct: 31  KHGKTYKNQVEETARFNIFKDNLRAIEQHNVLYEQGLVSYKKGINRFTDMTQEEF---RA 87

Query: 76  RLTHSRIRRTLVRSPESNESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            LT S  ++    + E   + L +PD +DWR KG +T   +Q +CG+C+AFS+  + +  
Sbjct: 88  FLTLSSSKKPHFNTTEHVLTGLAVPDSIDWRTKGQVTGVKDQGNCGSCWAFSVTGSTEAA 147

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
            ++   ++  LS QQ+VDCS    N GC GG L  T  YV+ + GL  E  YPYKG    
Sbjct: 148 YYRKAGKLVSLSEQQLVDCS-TDINAGCNGGYLDETFTYVK-SKGLEAESTYPYKGTDGS 205

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           CK+    +V  +S    L  +DE+AL   +  VGP++V+I+A+      Y SGIY+D+ C
Sbjct: 206 CKYSASKVVTKVSGHKSLKSEDENALLDAVGNVGPVSVAIDAT--YLSSYESGIYEDDWC 263

Query: 255 TSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           +   +NH +L+VGY T N    WI+KN W   +G++GY  L RG N CG+A   VY +I
Sbjct: 264 SPSELNHGVLVVGYGTSNGKKYWIVKNSWGGSFGESGYFRLLRGKNECGVAEDTVYPII 322


>gi|15593252|gb|AAL02222.1|AF410882_1 cysteine protease CP14 precursor [Frankliniella occidentalis]
          Length = 333

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 156/299 (52%), Gaps = 6/299 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y     ++ +   ++ N  +I  HN     G   + +  N  +D+H     +++  
Sbjct: 35  HAKTYANAVEEAYRAKVFKENAIRIAKHNDRFASGEVTFKVGYNQYADMHTHEVTEKLNG 94

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
                 + +      SN+S      +DWR KG +TP  +Q  CG+C++FS   +++GQ+F
Sbjct: 95  YRSGLKQASAFVHTASNDSWPWSKKVDWRSKGAVTPIKDQGQCGSCWSFSATGSLEGQLF 154

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
                +  LS Q +VDCS   GN GC GG + +   YV+  GG+  EE YPY  +   C 
Sbjct: 155 LKNKNLVSLSEQNLVDCSWDFGNEGCNGGLMDSAFEYVKSNGGIDTEESYPYTAEDGTCL 214

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +K  N     + +  +  + E AL+  +  VGP++V+I+AS  +FQ+Y SGIY + AC+S
Sbjct: 215 YKAANNAGVNTGYKDVQAKSESALRDAVEKVGPVSVAIDASNWSFQMYTSGIYYEPACSS 274

Query: 257 DYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           D ++H +L VGY      +  WI+KN W   WG+ GY+ + R   N CGIA  A Y L+
Sbjct: 275 DSLDHGVLAVGYGSEWPNKEFWIVKNSWGTSWGEEGYIKMARNKKNNCGIATEASYPLV 333


>gi|432853333|ref|XP_004067655.1| PREDICTED: cathepsin L2-like [Oryzias latipes]
          Length = 352

 Score =  184 bits (466), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 161/301 (53%), Gaps = 27/301 (8%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY------------IKEM 74
           D +++  W+ NH+ I+ HNQ    G   +++  N   DL  + Y            +K  
Sbjct: 61  DMQRRAIWEENHRMINDHNQRFLTGKRPFSMGMNKYGDLTGQEYRVLQGAVMNAQFVKRG 120

Query: 75  TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
             ++  R+R    +S            +D+R  G++T   +Q  CG+C+AFS   AI+GQ
Sbjct: 121 KEVSARRLRYNARKSEAG--------FVDYRNMGYVTEVKDQGYCGSCWAFSTTGAIEGQ 172

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS- 193
           I K T ++  LS Q +VDCS   G  GC+G  + +  +YV  + GL   + YPY    + 
Sbjct: 173 IVKKTGQLLSLSEQNLVDCSRPYGTHGCSGAWMASAYDYV-LSNGLQTTDSYPYTSVDTQ 231

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C +     V  I  +  +P  DE AL   +AT+GPI V+I+A   +F  Y+SGIYD+  
Sbjct: 232 PCFYDSRLAVAHIKDYRFIPQGDEQALADAVATIGPITVAIDADHASFLFYSSGIYDEPN 291

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYAL 308
           C  + ++HA+LLVGY     ++ WI+KN W   WG+ GYM + R G+N CGIA+YA+Y +
Sbjct: 292 CDPNRLSHAVLLVGYGSEEGQDYWIIKNSWGSSWGEGGYMRIIRNGSNTCGIASYALYPI 351

Query: 309 I 309
           +
Sbjct: 352 L 352


>gi|340371596|ref|XP_003384331.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 153/303 (50%), Gaps = 19/303 (6%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K YR    D+ ++  W  N   ++ HN         + L  N  +DL    +     
Sbjct: 35  KYGKTYRSIYEDNMRQKIWLQNRDYVNEHNSMDSS----FQLEVNEFADLTAEEFSSIYN 90

Query: 76  RLTHSRIRR-----TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
                R R      T+ R         IPD +DWR KG +TP  NQ+ CG+C+AFS   +
Sbjct: 91  GYGKGRNRENHENTTIYRYTGG----AIPDSVDWRTKGLVTPVKNQKQCGSCWAFSTTGS 146

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++G   K T ++  LS Q +VDC     + GC GG +     Y++   G+  EE YPYK 
Sbjct: 147 LEGAHAKKTGKLVSLSEQNLVDCD--KKDHGCQGGLMTTAFKYIEENKGIDTEESYPYKA 204

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           K   C+FK+ +I   +     +   D  ALK  +A +GPI+V+++AS  +FQLY SGIYD
Sbjct: 205 KNGRCEFKKDDIGATVERHVSILTTDCEALKKAVAEIGPISVAMDASHSSFQLYKSGIYD 264

Query: 251 DEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306
            + C+S  ++H +L+VGY +      W++KN W  +WG  GY  +    N CGI   A Y
Sbjct: 265 PKICSSRKLDHGVLVVGYGKEDGEEYWLVKNSWGKNWGMEGYFKIASKKNLCGICTSACY 324

Query: 307 ALI 309
            ++
Sbjct: 325 PVV 327


>gi|288764227|emb|CAQ03434.1| silcatein 4 [Spongilla lacustris]
          Length = 331

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 162/303 (53%), Gaps = 17/303 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + +++K Y  +  + ++   W SN K I  HN  A+  L GYTL  N L DL    Y   
Sbjct: 33  KGQHQKSYTSELEELERHAIWSSNKKYIEEHN--ARSDLFGYTLAMNSLGDLSMEEY--N 88

Query: 74  MTRLTHSRIRRT-----LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
              LTH     T     + R+P     V   + +DWR KG +T    Q  CGA YAF+  
Sbjct: 89  QMYLTHKTGDHTHHGLKVFRAPRG---VQYAESIDWRTKGAVTSIKYQAQCGASYAFAAT 145

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++G    +  +   LS Q ++DCS+  GN GC+GG     L YV   GG+  E  Y +
Sbjct: 146 GALEGASALANDKQVTLSEQNIIDCSVPYGNHGCSGGDTYTALKYVIDNGGIDTESSYSF 205

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           + KQS C++   N     +    +    E  L   +ATVGP+A++++A+ + F+ Y SG+
Sbjct: 206 QAKQSSCQYNSTNSGASATGVVRIASGSESDLLAAVATVGPVAIAVDANTNAFRFYKSGV 265

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANY 303
           +D  +C++  +NHAML+ GY     ++ W++KN +  +WGD+GY+ + R   N+CGIA+ 
Sbjct: 266 FDSSSCSNTVLNHAMLVTGYGSYNGKDYWLVKNSFGKNWGDSGYILMVRNKYNQCGIASD 325

Query: 304 AVY 306
           ++Y
Sbjct: 326 SLY 328


>gi|156124996|gb|ABU50816.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 170/306 (55%), Gaps = 15/306 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  + + Y     +  +K  +++N + I  HN +   G   +++  N+ +DL    +   
Sbjct: 37  KSTFGRVYPSPEIELHRKSIFRANLQFILRHNIDYFNGDSTFSVSVNNFTDLSNEEF--- 93

Query: 74  MTRLTHSRIRR----TLVRSPESNESV-LIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
             R T +  RR    +L  S  ++  V  +P  +DW  KG +TP  NQ+ CG+C+AFS  
Sbjct: 94  --RATFNGYRRLAAVSLADSVHADNDVEALPATVDWTTKGVVTPIKNQQQCGSCWAFSAV 151

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
           ++++GQ    T ++  LS Q +VDCS   G++GC+GG +     YV    G+  E  YPY
Sbjct: 152 ASMEGQHALKTGKLVSLSEQNLVDCSAAEGDMGCSGGWMDYAFKYVIQNRGIDTEASYPY 211

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           K     C+FKR +I   I S+  +   DE AL+  +A++GPI+V+I+AS  +FQ Y+SG+
Sbjct: 212 KAIDESCEFKRNSIGATIHSFVDVKTGDESALQNAVASIGPISVAIDASQPSFQFYSSGV 271

Query: 249 YDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           Y++  C+++ ++H +  VGY T N    W +KN W   WG  GY+++ R   N+CGIA  
Sbjct: 272 YNEPDCSTEILDHGVTAVGYGTLNGVPYWKVKNSWGTSWGQKGYIFMSRNKQNQCGIATK 331

Query: 304 AVYALI 309
           A Y ++
Sbjct: 332 ASYPVV 337


>gi|195628596|gb|ACG36128.1| vignain precursor [Zea mays]
          Length = 362

 Score =  183 bits (465), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 154/307 (50%), Gaps = 22/307 (7%)

Query: 15  KKYKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY 70
           KK+   YR+K  D  +K H    +++N + I   N     G   Y L  N  +DL  + +
Sbjct: 60  KKWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAG---GKKKYVLGTNQFADLTSKEF 116

Query: 71  IKEMTRL-----THSRIRRTLVRSPESNESVLIPD-HLDWREKGFITPDWNQEDCGACYA 124
               T L       S  ++        N + L  D  +DWR++G +TP  NQ  CG C+A
Sbjct: 117 AAMYTGLRKPAAVPSGAKQIPAGFKYQNFTRLDDDVQVDWRQQGAVTPVKNQGQCGCCWA 176

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           FS   A++G I  +T  +  LS QQ++DC    GN GC GG + N   YV   GG+  E+
Sbjct: 177 FSAVGAMEGLIMITTGNLVSLSEQQILDCDESDGNQGCNGGYMDNAFQYVVNNGGVTTED 236

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   Q  C+  +P     IS +  LP  DE+AL   +A   P++V ++     FQ Y
Sbjct: 237 AYPYSAVQGTCQNVQP--AATISGFQDLPSGDENALANAVANQ-PVSVGVDGGSSPFQFY 293

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRGNNRCG 299
             GIYD + C +D +NHA+  +GY  +      WILKN W   WG+NG+M L+ G   CG
Sbjct: 294 QGGIYDGDGCGTD-MNHAVTAIGYGADDQGTQYWILKNSWGTGWGENGFMQLQMGVGACG 352

Query: 300 IANYAVY 306
           I+  A Y
Sbjct: 353 ISTMASY 359


>gi|387915178|gb|AFK11198.1| cathepsin L1 [Callorhinchus milii]
          Length = 331

 Score =  183 bits (465), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 165/303 (54%), Gaps = 19/303 (6%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           ++K Y     ++ +++ WQ+N ++I THN E ++    + +  NH  DL       E  R
Sbjct: 33  HRKQYANLVEETNRRIIWQANLQEIKTHNMEYKRRRVSFKMGMNHFGDLSS----SEFQR 88

Query: 77  LTH--SRIRRTLVRSPESNESVL------IPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           + H  S  +R+ V   +  +  L      I   +DWR+KG++TP + Q  CG+CY F+  
Sbjct: 89  IYHHQSFKQRSFVYIIQEVKPFLPFNNSFIVRSVDWRKKGYVTPVYYQGTCGSCYGFAAT 148

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            +++  IFK   ++ +LS Q +VDCS   GNLGC+GGS+     +V    G+   + YPY
Sbjct: 149 GSLEAMIFKKYGKLIKLSEQSIVDCSSYYGNLGCSGGSIIRAYKFV-MENGIQSADTYPY 207

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
             K   C+  + + V  +S + +    +E AL  T++TVGP+AV ++    ++Q Y SGI
Sbjct: 208 TAKAGTCRHNKSSTVATMSHY-IKVHSNEEALAQTVSTVGPVAVCVHTKTRSWQFYKSGI 266

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANY 303
             D  C +   +H +L+VG+      + WI+KN W   WG  GY+++ K  NN CGI++Y
Sbjct: 267 LYDPLCKNYTYDHGILVVGFGIQKDEHYWIVKNSWGSRWGMKGYIWIAKDRNNHCGISSY 326

Query: 304 AVY 306
           A Y
Sbjct: 327 ATY 329


>gi|195153545|ref|XP_002017686.1| GL17172 [Drosophila persimilis]
 gi|194113482|gb|EDW35525.1| GL17172 [Drosophila persimilis]
          Length = 341

 Score =  183 bits (464), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 166/308 (53%), Gaps = 15/308 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++K+Y+ +  +  +   +  N  KI  HNQ    G   + +  N  +D+    +   M 
Sbjct: 35  EHRKNYQDETEERFRLKIFNENKHKIAKHNQLWATGAVSFKMAVNKYADMLHHEFYSTMN 94

Query: 76  RLTHSRIRRTLVRSPES--------NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              ++ + + L  + ES         E V +P  +DWR KG +T   +Q  CG+C+AFS 
Sbjct: 95  GFNYT-LHKQLRNADESFKGVTFISPEHVTLPKQVDWRTKGAVTDVKDQGHCGSCWAFSS 153

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++GQ ++ +  +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 154 TGALEGQHYRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYP 213

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+     C F + +I      +  +P  +E  +   +AT+GP+AV+I+AS  +FQ Y+ G
Sbjct: 214 YEAIDDSCHFNKGSIGATDRGFVDIPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEG 273

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM-YLKRGNNRCGIA 301
           +Y++ AC +  ++H +L+VG+  +      W++KN W   WGD G++  L+   N+CGIA
Sbjct: 274 VYNEPACDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIA 333

Query: 302 NYAVYALI 309
           + + Y L+
Sbjct: 334 SASSYPLV 341


>gi|158300877|ref|XP_001689282.1| AGAP011828-PA [Anopheles gambiae str. PEST]
 gi|157013372|gb|EDO63348.1| AGAP011828-PA [Anopheles gambiae str. PEST]
          Length = 344

 Score =  183 bits (464), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 169/326 (51%), Gaps = 21/326 (6%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  +EW    +  +KKY  +  ++    + K++ Q+ HK I  HNQ    G   + LR N
Sbjct: 23  LVKEEWTAFKLQHRKKYDSETEERI---RMKIYVQNKHK-IAKHNQRYDLGQEKFRLRVN 78

Query: 61  HLSDLHPRHYIKEMTRLTHS-----RIRRTLVRSPESN------ESVLIPDHLDWREKGF 109
             +DL    ++  +     S     ++ R  ++  E         +V +P  +DWR KG 
Sbjct: 79  KYADLLHEEFVHTLNGFNRSVSGKGQLLRGELKPIEEPVTWIEPANVDVPTAMDWRTKGA 138

Query: 110 ITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRN 169
           +T   +Q  CG+C++FS   A++GQ F+ T ++  LS Q +VDCS   GN GC GG +  
Sbjct: 139 VTQVKDQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSQKYGNNGCNGGMMDF 198

Query: 170 TLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGP 229
              Y++   G+  E+ YPY+     C +    +      +  +P  +E AL   LATVGP
Sbjct: 199 AFQYIKDNKGIDTEKSYPYEAIDDECHYNPKAVGATDKGFVDIPQGNEKALMKALATVGP 258

Query: 230 IAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWG 284
           ++V+I+AS  +FQ Y+ G+Y +  C S+ ++H +L VGY       + W++KN W   WG
Sbjct: 259 VSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGYGTTEDGEDYWLVKNSWGTTWG 318

Query: 285 DNGYMYLKRG-NNRCGIANYAVYALI 309
           D GY+ + R  +N CGIA  A Y L+
Sbjct: 319 DQGYVKMARNRDNHCGIATTASYPLV 344


>gi|17224950|gb|AAL37181.1|AF320084_1 cathepsin L-like protease [Ancylostoma caninum]
          Length = 214

 Score =  183 bits (464), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 132/214 (61%), Gaps = 6/214 (2%)

Query: 102 LDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLG 161
           +DWR+KG +T   NQ  CG+C+AFS   A++GQ  +++ ++  LS Q +VDCS   GN G
Sbjct: 1   VDWRDKGLVTEVKNQGMCGSCWAFSATGALEGQHARASGQMVSLSEQNLVDCSTKYGNHG 60

Query: 162 CAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALK 221
           C GG +     Y++   G+  EE YPY G+   C FK+ +I    + +  LP  DE ALK
Sbjct: 61  CNGGLMDLAFEYIKDNHGIDTEESYPYVGRDMKCHFKKKDIGAVDNGYVDLPEGDEEALK 120

Query: 222 VTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILK 276
           + +AT GPI+++I+A   TFQLY  G+Y DE C+S+ ++H +LLVGY  +      W++K
Sbjct: 121 IAVATQGPISIAIDAGHRTFQLYKKGVYYDEECSSEELDHGVLLVGYGTDPEAGDYWLVK 180

Query: 277 NWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           N W   WG+ GY+ + R  NN CG+A  A Y L+
Sbjct: 181 NSWGTGWGEKGYIRIARNRNNHCGVATKASYPLV 214


>gi|313241067|emb|CBY33367.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  183 bits (464), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 162/310 (52%), Gaps = 14/310 (4%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           KEW       Q K  K Y+ +  + +   +W  + + +  HN +A  G   +T+  N  +
Sbjct: 25  KEW-------QAKVSKAYQSEGHEMRGFQNWLVSRQFVMEHNIKAFTGQESFTVEMNQFA 77

Query: 64  DLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACY 123
           DL    ++ E  RL +     +  +   S+ +   PD +DWR +G++TP  +Q  CG+C+
Sbjct: 78  DLSDEEWV-EYNRLRNGAKANSDCKPMPSSSAEANPDSVDWRNEGYVTPIKDQGQCGSCW 136

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKE 183
           AFS   + +G  FK T ++  LS QQ+VDCS   G+ GC GG +     Y+    G+  E
Sbjct: 137 AFSTTGSTEGAHFKKTGKLVTLSEQQLVDCSTKEGDHGCNGGLMDFGFTYIIENDGITTE 196

Query: 184 EDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
             YPYK +   CK         +S    +    E  L+  +ATVGPI+V+I+A   +F+L
Sbjct: 197 SAYPYKAQDGSCK-SGMTAAATLSECYDVAQGSEADLETAVATVGPISVAIDAHLLSFRL 255

Query: 244 YASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYL-KRGNNRC 298
           Y  GIY D  C+S  ++H +L VGY    + N WI+KN W+  WG+ GY+++ K   N C
Sbjct: 256 YKQGIYHDRLCSSTRLDHGVLAVGYKNDPSGNYWIVKNSWNTTWGNEGYIWMAKDKKNTC 315

Query: 299 GIANYAVYAL 308
           GIA  A Y +
Sbjct: 316 GIATAASYPV 325


>gi|351712164|gb|EHB15083.1| Cathepsin L1 [Heterocephalus glaber]
          Length = 278

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/279 (35%), Positives = 147/279 (52%), Gaps = 16/279 (5%)

Query: 39  KKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLI 98
           + +  HN E  +G HG+T+  N   D+    + + M    H + ++         E +L+
Sbjct: 2   RMLELHNGEYSEGKHGFTMAMNAFGDMTSEEFKQVMNGFQHQKHKKGKTY----QEPLLL 57

Query: 99  P--DHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSII 156
                +DWREKG++TP  NQ  CG C+AFS   +++GQ+F+ T ++  LS Q +VDCS  
Sbjct: 58  QLLKSVDWREKGYVTPVKNQGQCGTCWAFSATGSLEGQMFQKTGQLVSLSEQNLVDCSRP 117

Query: 157 SGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQD 216
            GN GC GG +     YV+   GL  E+ YPY+GK   CK+K P +     +  V   Q 
Sbjct: 118 QGNQGCNGGLMDFAFEYVKENKGLESEKFYPYEGKDGSCKYK-PELSAANDTGFVDISQR 176

Query: 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS---- 272
           E AL   +A  GPI+V+++A   +FQ Y  GIY D  C+S  +NH +L++GY        
Sbjct: 177 EKALMKAVAEEGPISVAVDAGLTSFQFYKDGIYFDPECSSKDLNHGVLVLGYGYEEVNSE 236

Query: 273 ----WILKNWWSHHWGDNGYMYLKRGNNR-CGIANYAVY 306
               W++KN     WG  GYM +    N+ CGIA  A Y
Sbjct: 237 KNEYWLVKNSSGPEWGAKGYMKIAGNRNKHCGIATAASY 275


>gi|125811033|ref|XP_001361727.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
 gi|54636904|gb|EAL26307.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
          Length = 341

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 165/308 (53%), Gaps = 15/308 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++K+Y+ +  +  +   +  N  KI  HNQ    G   + +  N  +D+    +   M 
Sbjct: 35  EHRKNYQDETEERFRLKIFNENKHKIAKHNQLWATGAVSFKMAVNKYADMLHHEFYSTMN 94

Query: 76  RLTHSRIRRTLVRSPES--------NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              ++ + + L  + ES         E V +P  +DWR KG +T   +Q  CG+C+AFS 
Sbjct: 95  GFNYT-LHKQLRNADESFKGVTFISPEHVTLPKQVDWRTKGAVTDVKDQGHCGSCWAFSS 153

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++GQ ++ +  +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 154 TGALEGQHYRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYP 213

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+     C F +  I      +  +P  +E  +   +AT+GP+AV+I+AS  +FQ Y+ G
Sbjct: 214 YEAIDDSCHFNKGTIGATDRGFVDIPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEG 273

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM-YLKRGNNRCGIA 301
           +Y++ AC +  ++H +L+VG+  +      W++KN W   WGD G++  L+   N+CGIA
Sbjct: 274 VYNEPACDAQNLDHGVLVVGFGTDESGQDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIA 333

Query: 302 NYAVYALI 309
           + + Y L+
Sbjct: 334 SASSYPLV 341


>gi|313221001|emb|CBY31833.1| unnamed protein product [Oikopleura dioica]
 gi|313229611|emb|CBY18426.1| unnamed protein product [Oikopleura dioica]
          Length = 362

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/331 (33%), Positives = 174/331 (52%), Gaps = 26/331 (7%)

Query: 1   MTNK-EWIIIFIFPQKK--YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTL 57
           M++K E  +I  F Q K  ++K+Y     + ++   W  N   I  HN +   G   +TL
Sbjct: 26  MSDKYEQRLINEFKQWKDAFEKEYESIEQEIERMGTWMKNMLHIEEHNFQHSLGKKTFTL 85

Query: 58  RENHLSD-------------LHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDW 104
             N   D             LH     +++  L         V + ES     +   +DW
Sbjct: 86  GMNKYGDQSSEEFAATYNGFLHAEGQTRKLFGLHEDAFYLDWVDADESK----LDKSVDW 141

Query: 105 REKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAG 164
           REKG +T   +Q  CG+C++FS   A++GQ+ +   ++ +LS Q +VDCS   GN GC G
Sbjct: 142 REKGAVTEVKDQGQCGSCWSFSATGALEGQMAQVFGKLPDLSEQNLVDCSRPEGNQGCNG 201

Query: 165 GSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVDISSWSVLPPQDEHALKVT 223
           G +     YV+   GL  E+ YPY+G     C++ + +   D + + ++P  +E ALK  
Sbjct: 202 GLMDAAFQYVKDQDGLDGEDWYPYEGVDNKECRYDKSHREADDTGFKMIPEGNEKALKHA 261

Query: 224 LATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWW 279
           LA VGP++V+I+AS  +FQ Y SG+Y +  C+ + ++H +L VGY        +++KN W
Sbjct: 262 LAKVGPVSVAIDASNPSFQFYQSGVYYEPNCSPENLDHGVLAVGYGTEDGEHYYLVKNSW 321

Query: 280 SHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           S  WGDNGY+ + R   N CGIA+YAVY ++
Sbjct: 322 SEAWGDNGYIKMARNKENHCGIASYAVYPIV 352


>gi|45822209|emb|CAE47501.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 325

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 170/316 (53%), Gaps = 21/316 (6%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           +EW+   +    K  K Y+    +  +   +Q N +KI  HN++   G   +       +
Sbjct: 21  EEWVQFKV----KNNKSYKSYVEEQTRFRIFQENLRKIENHNEKYNNGESTFKFGVTKFT 76

Query: 64  DLHPRHYIKEMTRLTHSRIRRTL---VRSPESNESVLIPDHLDWREKGFITPDWNQEDCG 120
           DL  + ++  +    ++R  RT    + +P  +    +P   DWR+KG +T   +Q  CG
Sbjct: 77  DLTEKEFLDLLVLSKNARPNRTHATHLLAPLRD----LPSAFDWRDKGAVTEVKDQGMCG 132

Query: 121 ACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGL 180
           +C+ FS   +++   F  T  +  LS Q +VDC+  +   GC GG +   L Y++  GG+
Sbjct: 133 SCWTFSTTGSVEAAHFLKTGNLVSLSEQNLVDCAKDTC-YGCGGGWMDKALEYIE-KGGI 190

Query: 181 MKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
           M E+DYPY+G    C+F    +   IS+++ +   DE  LK  +A  GPI+V+I+AS  T
Sbjct: 191 MSEKDYPYEGVDDNCRFDISKVAAKISNFTYIKKNDEEDLKNAVAAKGPISVAIDASA-T 249

Query: 241 FQLYASGIYDDEACTSDY--VNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG 294
           FQLY SGI DD  C++++  +NH +L+VGY     ++ WI+KN W  +WG +GY+ + R 
Sbjct: 250 FQLYVSGILDDTECSNEFDSLNHGVLVVGYGTENGKDYWIIKNSWGVNWGMDGYIRMSRN 309

Query: 295 -NNRCGIANYAVYALI 309
            NN+CGI    VY  I
Sbjct: 310 KNNQCGITTDGVYPNI 325


>gi|226508570|ref|NP_001141984.1| uncharacterized protein LOC100274134 precursor [Zea mays]
 gi|194706676|gb|ACF87422.1| unknown [Zea mays]
 gi|413920745|gb|AFW60677.1| vignain [Zea mays]
          Length = 363

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/308 (35%), Positives = 154/308 (50%), Gaps = 23/308 (7%)

Query: 15  KKYKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY 70
           KK+   YR+K  D  +K H    +++N + I   N     G   Y L  N  +DL  + +
Sbjct: 60  KKWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAG---GKKKYVLGTNQFADLTSKEF 116

Query: 71  IKEMTRLTHSRIRRTLVR------SPESNESVLIPD-HLDWREKGFITPDWNQEDCGACY 123
               T L       +  +      S   N + L  D  +DWR++G +TP  NQ  CG C+
Sbjct: 117 AAMYTGLRKPAAVPSGAKQIPAAGSKYQNFTRLDDDVQVDWRQQGAVTPVKNQGQCGCCW 176

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKE 183
           AFS   A++G I  +T  +  LS QQ++DC    GN GC GG + N   YV   GG+  E
Sbjct: 177 AFSAVGAMEGLIMITTGNLVSLSEQQILDCDESDGNQGCNGGYMDNAFQYVINNGGVTTE 236

Query: 184 EDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
           + YPY   Q  C+  +P     IS +  LP  DE+AL   +A   P++V ++     FQ 
Sbjct: 237 DAYPYSAVQGTCQNVQP--AATISGFQDLPSGDENALANAVANQ-PVSVGVDGGSSPFQF 293

Query: 244 YASGIYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRGNNRC 298
           Y  GIYD + C +D +NHA+  +GY  +      WILKN W   WG+NG+M L+ G   C
Sbjct: 294 YQGGIYDGDGCGTD-MNHAVTAIGYGADDQGTQYWILKNSWGTGWGENGFMQLQMGVGAC 352

Query: 299 GIANYAVY 306
           GI+  A Y
Sbjct: 353 GISTMASY 360


>gi|348504496|ref|XP_003439797.1| PREDICTED: digestive cysteine proteinase 2-like [Oreochromis
           niloticus]
          Length = 352

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 161/293 (54%), Gaps = 11/293 (3%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY-IKEMTRLTHSRIRR- 84
           D ++++ W+ N + I  +N+    G+  +++  N   DL  + Y + +  ++    ++R 
Sbjct: 61  DMERRVIWEENKQLIEDNNRRFLMGMKSFSMAMNKYGDLTQQEYRVLQGAKMNAQFVKRG 120

Query: 85  --TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
                R   ++   L    +D+R  GF+T   +Q  CG+C+AFS   AI+ Q++K T ++
Sbjct: 121 KEVSARRLRNSARHLDGFAVDYRSMGFVTEVKDQGFCGSCWAFSTTGAIEAQLYKKTGQL 180

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-ICKFKRPN 201
             LS Q +VDCS   G  GC+G  + N  +YV  + GL     YPY    +  C +    
Sbjct: 181 ISLSEQNLVDCSKSFGTYGCSGAWMANAYDYV-VSNGLESSNTYPYTSVDTQPCFYDSSL 239

Query: 202 IVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNH 261
            V  I  +  +P  DE A+   LAT+GPI V+I+A   +F  Y+SGIYD+  C  + +NH
Sbjct: 240 AVAHIRDYRFIPRGDEQAMADALATIGPITVTIDADHASFLFYSSGIYDEPNCNPNNLNH 299

Query: 262 AMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
           A+LLVGY     ++ WI+KN W   WG+ GYM + R G N CG+A+YA+Y ++
Sbjct: 300 AVLLVGYGSQEGQDYWIIKNSWGTGWGEGGYMRIVRNGQNACGLASYALYPIL 352


>gi|288764225|emb|CAQ03433.1| silcatein 2 [Spongilla lacustris]
 gi|296168749|emb|CAQ54052.1| silicatein alpha 4 [Spongilla lacustris]
          Length = 326

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 163/303 (53%), Gaps = 17/303 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY--- 70
           + +++K Y  +  + ++   W SN K I  HN  A+  L GYTL  N L DL    Y   
Sbjct: 28  KGQHQKSYTSELEELERHAIWSSNKKYIEEHN--ARSDLFGYTLAMNSLGDLSMEEYNEI 85

Query: 71  --IKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
               E    TH  ++  + ++P+    V   D +DWR KG +T    Q  CGA YAF+  
Sbjct: 86  YLTHETGNYTHHGLK--MFQAPKG---VQYADSIDWRAKGAVTSIKYQAQCGASYAFAAT 140

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++G    +  +   LS Q ++DCS+  GN GC+GG     L YV   GG+  E    +
Sbjct: 141 GALEGASALANDKQVTLSEQNIIDCSVPYGNHGCSGGDTYTALKYVIDNGGIDTESSCSF 200

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           + KQS C++   N     +    +    E  L   +ATVGP+A++++A+ + F+ Y SG+
Sbjct: 201 QAKQSSCQYNSKNSGASATGVINIAFGSESDLLAAVATVGPVAIAVDANTNAFRFYQSGV 260

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANY 303
           +D  +C++  +NHAML+ GY     ++ W++KN W  +WGD+GY+ + R   N+CGIA+ 
Sbjct: 261 FDSSSCSNTKLNHAMLVTGYGSYNGKDYWLVKNSWGKNWGDSGYILMVRNKYNQCGIASD 320

Query: 304 AVY 306
           ++Y
Sbjct: 321 SLY 323


>gi|33242865|gb|AAQ01137.1| cathepsin [Branchiostoma lanceolatum]
          Length = 328

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 175/320 (54%), Gaps = 20/320 (6%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + N +W +     +K Y + Y  +  +  ++L ++ N K I  HN+EA +GLH + L  N
Sbjct: 18  LMNPQWEVF----KKAYNRVYAAEE-EFARRLIFEDNLKTIQMHNEEADRGLHTFRLGVN 72

Query: 61  HLSDLHPRHYIKEMTR--LTHSRIRRTLVRSPESNESVL--IPDHLDWREKGFITPDWNQ 116
             +D+  + +++ +    L  +   ++        +  L  +PD +DWR+KG++TP  NQ
Sbjct: 73  QYADMTHKEFLENVIGGCLLDTNTSKSTADHVHEYDPTLTDLPDTVDWRDKGYVTPVKNQ 132

Query: 117 EDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQF 176
           E CG+C+AFS   +++GQ FKST ++  LS Q +VDCS   G  G  G  +     Y++ 
Sbjct: 133 EQCGSCWAFSTTGSLEGQHFKSTQKLVSLSEQNLVDCSRKRGT-GLPGRLMDQGFKYIKD 191

Query: 177 AGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE--HALKVTLATVGPIAVSI 234
            GG+  EE YPYK K   C ++        ++ +    QDE   AL+  +ATVGPI+V+I
Sbjct: 192 NGGIDTEECYPYKAKNEKCNYQAS---CSGATLTAKRRQDEGRGALQQAVATVGPISVAI 248

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMY 290
           +A   +FQLY SG+Y    C+   ++H +L VGY     ++ W++KN W   WG+ GY+ 
Sbjct: 249 DAGHSSFQLYQSGVYHKFFCSETKMDHGVLAVGYGTEEGKDYWLVKNSWGASWGEKGYIK 308

Query: 291 LKRG-NNRCGIANYAVYALI 309
           + R  +N  GIA  A Y  +
Sbjct: 309 MSRNRHNNWGIATSASYPTV 328


>gi|443722452|gb|ELU11310.1| hypothetical protein CAPTEDRAFT_132308 [Capitella teleta]
          Length = 235

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 141/222 (63%), Gaps = 6/222 (2%)

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
           E++ +P  +DWREKG++TP  NQ  CG+C+AFS   +++GQ+F+ T  +  +S Q +VDC
Sbjct: 14  ENLQVPKTVDWREKGYVTPVKNQGQCGSCWAFSSTGSLEGQVFRKTGRLPSISEQNLVDC 73

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GN+GC+GG + N   Y++   G+  E+ YPY+     C++K+ + V   S +  +P
Sbjct: 74  SRDEGNMGCSGGLMDNAFTYIKKNMGIDSEKSYPYEAVDGECRYKKSDSVTTDSGFVDIP 133

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYT---- 269
             DE AL+  +A+VGP++V+I+AS  +FQ Y +G+Y +  C+S  ++H +L+V       
Sbjct: 134 HGDETALRTAVASVGPVSVAIDASHTSFQFYKTGVYTEANCSSTQLDHGVLVVVGYGVEN 193

Query: 270 -RNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
            ++ W++KN W   WG+ GY+ + R   N+CGIA+ A Y L+
Sbjct: 194 GQDYWLVKNSWGASWGEAGYIKMARNHGNQCGIASQASYPLL 235


>gi|28971813|dbj|BAC65418.1| cathepsin L [Pandalus borealis]
          Length = 318

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 166/301 (55%), Gaps = 13/301 (4%)

Query: 15  KKYKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY 70
           + +K  + K  T  K+ L+    +++N K +  HN+  +QGL  + L+ N   D+    +
Sbjct: 19  ENFKLTHAKVYTHGKEDLYRRSIFENNQKVVEEHNERFRQGLVTFDLKMNRFGDMTTEEF 78

Query: 71  IKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           + +MT L  +++ RT+ +       V   D +DWR+KG +TP  +Q  CG+C+AFS   A
Sbjct: 79  VSQMTGL--NKVERTVGKVFAHYPEVERADTVDWRDKGAVTPVKDQGQCGSCWAFSTTGA 136

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++G  F    ++  LS Q +VDCS  + N GC GG ++   +Y++   G+  E  YPY+ 
Sbjct: 137 LEGAHFLKHGDLVSLSEQNLVDCS--TENSGCNGGVVQWAYDYIKSNNGIDTESSYPYEA 194

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C+F   ++   ++ ++ +P  DE      +   GP++V I+A  ++FQLY+SG+Y 
Sbjct: 195 QDLTCRFDAAHVGATVTGYADIPYADEVTQASAVHDDGPVSVCIDAGHNSFQLYSSGVYY 254

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           +  C    +NHA+L VGY      + W++KN W   WG +GYM L R  +N CG+A  + 
Sbjct: 255 EPNCNPSSINHAVLPVGYGTEEGSDYWLIKNSWGTGWGLSGYMKLTRNKSNHCGVATQSC 314

Query: 306 Y 306
           Y
Sbjct: 315 Y 315


>gi|291224868|ref|XP_002732424.1| PREDICTED: cathepsin L-like [Saccoglossus kowalevskii]
          Length = 823

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 124/196 (63%), Gaps = 5/196 (2%)

Query: 119 CGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAG 178
           CG+C+AFS   +++GQ FK T ++ +LS QQ+VDCS   GN GC GG +     Y++ A 
Sbjct: 628 CGSCWAFSTTGSLEGQTFKKTGKLPDLSEQQLVDCSTQFGNHGCNGGLMDLAFEYIKAAP 687

Query: 179 GLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASP 238
           G+  E DYPY  K   C F +  +V   + +  +P  DE+ALK  +AT+GPI+V+I+A  
Sbjct: 688 GIEGEMDYPYLAKDGRCMFDQSKVVATDTGYVDIPSMDENALKEAVATIGPISVAIDAGH 747

Query: 239 HTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG 294
            +FQ+Y SG+Y++  C+S+ ++H +L VGY     ++ W++KN W   WG  GY+ + R 
Sbjct: 748 PSFQMYKSGVYNEPGCSSERLDHGVLAVGYGTEDGQDYWLVKNSWGDSWGQAGYIMMSRN 807

Query: 295 -NNRCGIANYAVYALI 309
            NN+CGIA  A Y L+
Sbjct: 808 MNNQCGIATQASYPLV 823


>gi|38146075|gb|AAR11477.1| cathepsin L [Litopenaeus vannamei]
          Length = 297

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 142/261 (54%), Gaps = 7/261 (2%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           ++ N + I  HN   + G   +TL+ N   D+     +  M     +  RR        +
Sbjct: 39  FEQNQQFIDDHNARFENGEVTFTLQMNQFGDMTSEEIVATMNGFLGAPTRRPAAVLKADD 98

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
           E+  +P+ +DWR KG +TP  +Q+ CG+C+AFS   +++GQ F    ++  LS Q +VDC
Sbjct: 99  ET--LPEKVDWRTKGAVTPVKDQKQCGSCWAFSTTGSLEGQHFLKDGKLVSLSEQNLVDC 156

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP 213
           S   GN+GC GG +     Y++   G+  E+ YPY+ +   C+F   N+    + +  + 
Sbjct: 157 SDKFGNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQDGKCRFDASNVGATDTGYVDVE 216

Query: 214 PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS- 272
              E ALK  +AT+GPI+V I+AS  TF  Y +G+Y D+ C+S  ++H +L VGY  +  
Sbjct: 217 HGSESALKKAVATIGPISVGIDASQSTFHFYHTGVYHDDHCSSTMLDHGVLAVGYGSDEN 276

Query: 273 ----WILKNWWSHHWGDNGYM 289
               W++KN W+  WGD GY+
Sbjct: 277 GGDFWLVKNSWNTSWGDKGYI 297


>gi|313235898|emb|CBY11285.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 162/310 (52%), Gaps = 14/310 (4%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           KEW       Q K  K Y+ +  + +   +W  + + +  HN +A  G   +T+  N  +
Sbjct: 25  KEW-------QVKVSKAYQSEGHEMRGFQNWLVSRQFVMEHNIKAFTGQESFTVEMNQFA 77

Query: 64  DLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACY 123
           DL    ++ E  RL +     +  +   S+ +   PD +DWR +G++TP  +Q  CG+C+
Sbjct: 78  DLSDEEWV-EYNRLRNGAKANSDCKPMPSSSAQANPDAVDWRPQGYVTPIKDQGQCGSCW 136

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKE 183
           AFS   + +G  FK T ++  LS QQ+VDCS   G+ GC GG +     Y+    G+  E
Sbjct: 137 AFSTTGSTEGAHFKKTGKLVMLSEQQLVDCSTKEGDHGCNGGLMDFGFTYIIENDGITTE 196

Query: 184 EDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
             YPYK +   CK         +S    +    E  L+  +ATVGPI+V+I+A   +F+L
Sbjct: 197 SAYPYKAQDGSCK-SGMTAAATLSECYDVAQGSEADLETAVATVGPISVAIDAHLLSFRL 255

Query: 244 YASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYL-KRGNNRC 298
           Y  GIY D  C+S  ++H +L VGY    + N WI+KN W+  WG+ GY+++ K   N C
Sbjct: 256 YKQGIYHDRLCSSTRLDHGVLAVGYKNDPSGNYWIVKNSWNTTWGNEGYIWMAKDKKNTC 315

Query: 299 GIANYAVYAL 308
           GIA  A Y +
Sbjct: 316 GIATAASYPV 325


>gi|256535831|gb|ACU82390.1| cathepsin L 2 [Pheronema raphanus]
          Length = 320

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 164/304 (53%), Gaps = 15/304 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + KY K Y  K  DS +K+ W++N + I  HN   +   + Y L  N ++D+  + + ++
Sbjct: 24  KAKYGKQYMSKDEDSMRKIIWENNLQYIEKHNSHNK---YAYKLAANKMADMTNKEFRQQ 80

Query: 74  MTRLTHSRIRRTLVRSPESNESVL--IPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
              L +  I    +       S++  IP  +DWR KG++T   +Q+ CG+C+AFS A ++
Sbjct: 81  Y--LGYIPIEEGPIEYKHLYNSIITDIPTSVDWRTKGYVTKVKDQKQCGSCWAFSAAGSL 138

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F   +    LS QQ+VDCS   GN GC GG +     Y +  G  M E  Y Y G+
Sbjct: 139 EGQYFTGQTNYF-LSEQQLVDCSRKEGNEGCDGGDMVLAFKYYEKYGA-MNESVYSYLGR 196

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
            + CKF     V  ++ +  +P  D ++LK   A  GPI+V+++AS ++FQ+Y+SGIYD 
Sbjct: 197 DAKCKFDENKAVAKVTGYKKIPKMDCNSLKNAAAVTGPISVAMDASHNSFQIYSSGIYDP 256

Query: 252 EAC--TSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAV 305
           + C   +  ++H +L+VGY   S    W++KN W   WG  GY  +  G + CGI   A 
Sbjct: 257 KRCGKRNRQLDHGVLVVGYGTESGEDFWLIKNSWGEDWGMQGYFKIAVGKDECGICTSAS 316

Query: 306 YALI 309
           +  +
Sbjct: 317 FPTV 320


>gi|21617827|sp|P09648.1|CATL1_CHICK RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain
          Length = 218

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 91/217 (41%), Positives = 131/217 (60%), Gaps = 6/217 (2%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWREKG++TP  +Q  CG+C+AFS   A++GQ F++  ++  LS Q +VDCS   G
Sbjct: 2   PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEG 61

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDE 217
           N GC GG +     YVQ  GG+  EE YPY  K    C++K      + + +  +P   E
Sbjct: 62  NQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHE 121

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSW 273
            AL   +A+VGP++V+I+A   +FQ Y SGIY +  C+S+ ++H +L+VGY     +  W
Sbjct: 122 RALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGGKKYW 181

Query: 274 ILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           I+KN W   WGD GY+Y+ K   N CGIA  A Y L+
Sbjct: 182 IVKNSWGEKWGDKGYIYMAKDRKNHCGIATAASYPLV 218


>gi|1705639|sp|Q10991.1|CATL1_SHEEP RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
          Length = 217

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 95/218 (43%), Positives = 131/218 (60%), Gaps = 7/218 (3%)

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
           +P  +DW +KG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q +VD S   
Sbjct: 1   VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQ 60

Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
           GN GC GG + N   Y++  GGL  EE YPY+   + C +K P       +  V  PQ E
Sbjct: 61  GNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDTSCNYK-PEYSAAKDTGFVDIPQRE 119

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNS- 272
            AL   +ATVGPI+V+I+A   +FQ Y SGIY D  C+S  ++H +L+VGY    T N  
Sbjct: 120 KALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTNNKF 179

Query: 273 WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           WI+KN W   WG+ GY+ + K  NN CGIA  A Y  +
Sbjct: 180 WIVKNSWGPEWGNKGYVKMAKDQNNHCGIATAASYPTV 217


>gi|432117576|gb|ELK37815.1| Cathepsin L1 [Myotis davidii]
          Length = 299

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 155/302 (51%), Gaps = 35/302 (11%)

Query: 39  KKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVRSPESNESVL 97
           K I  HN E  QG   +TL  N   D+    +   M    + + ++  + + P   E   
Sbjct: 2   KVIELHNWEHSQGRRNFTLAMNAFGDMTNEEFRLVMNGFQNQKHKKGDMFQEPALAE--- 58

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
           IP  +DWR+KG +TP  +Q  CG+C+AFS   A++GQ+F+ T ++  LS Q +VDCS   
Sbjct: 59  IPPSVDWRKKGCVTPVKDQGGCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQ 118

Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
           GN GC+GG + N   YV+   GL  EE YPY G    CK+K P       +  V   +DE
Sbjct: 119 GNEGCSGGLMDNAFQYVKDNEGLDTEESYPYYGTDDTCKYK-PEFSAANDTGFVDIHKDE 177

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYAS---------------------GIYDDEACTS 256
            +L   +A+VGPI+V+++AS  +FQ Y                       GIY D  C+S
Sbjct: 178 RSLMKAVASVGPISVALDASLESFQFYEKGKVTVSSYLEIFTPAMTSVFLGIYYDPDCSS 237

Query: 257 DYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
           + +NH +L+VGY            WI+KN W   WG +GY+ + +  +N CGIA+ A Y 
Sbjct: 238 EDLNHGVLVVGYGFEGVEMDNNKYWIVKNSWGTKWGMDGYIKMAKDLDNHCGIASMASYP 297

Query: 308 LI 309
            +
Sbjct: 298 TV 299


>gi|307192137|gb|EFN75465.1| Cathepsin L [Harpegnathos saltator]
          Length = 339

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 161/305 (52%), Gaps = 12/305 (3%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           ++K Y  K  +S +   +  N  KI  HNQ+ +     Y L  N   D+    +I  +  
Sbjct: 35  HRKAYDSKIEESFRMKIFMENWHKIALHNQKYELNEVSYKLGMNKYGDMLHHEFINTLNG 94

Query: 77  LTHS------RIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
              S        RR +        +V IP  +DWR  G +TP  +Q  CG+C++FS   A
Sbjct: 95  FNKSVSAQLRAQRRPIGSRFIEPANVEIPSSVDWRTHGAVTPIKDQGHCGSCWSFSATGA 154

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++GQ ++ T ++  LS Q ++DCS   GN GC GG +     Y++   GL  E  YPY+ 
Sbjct: 155 LEGQHYRITGKLVSLSEQNLIDCSGRYGNNGCNGGLMDQAFQYIKDNHGLDTEISYPYEA 214

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C++   N     S +  +P  +E  LK  +AT+GP++V+I+AS  +FQ Y  G+Y 
Sbjct: 215 ENDKCRYNPRNNGATDSGYVDIPEGNEKKLKAAVATIGPVSVAIDASAESFQFYREGVYY 274

Query: 251 DEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           +  C+S+ ++H +L+VGY      ++ W++KN W   WGD GY+ + R  +N CGIA+ A
Sbjct: 275 EPRCSSENLDHGVLVVGYGTDDNDQDYWLVKNSWGVTWGDEGYIKMARNKDNHCGIASSA 334

Query: 305 VYALI 309
            Y L+
Sbjct: 335 SYPLV 339


>gi|340374922|ref|XP_003385986.1| PREDICTED: cathepsin L-like [Amphimedon queenslandica]
          Length = 325

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 162/313 (51%), Gaps = 15/313 (4%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +T++EW    I     ++K Y+  A +  ++  W SN+K I  HN +       + L  N
Sbjct: 19  LTDEEWEQWKI----THRKTYQNVAVEESRRQVWSSNYKLIQEHNMKESS----FKLALN 70

Query: 61  HLSDLHPRHYI-KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDC 119
           H +DL    Y  K ++       +R ++       +      +DWR++G +T   NQ  C
Sbjct: 71  HFADLTNDEYTEKYLSSFDLEGFKRNMMNESLHANNAKADTAVDWRDRGAVTSVKNQGQC 130

Query: 120 GACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGG 179
           G+C+AFS   A++   F +   +  LS QQ+VDCS   GN GC GG +     YV+  G 
Sbjct: 131 GSCWAFSATGALEAMHFLNKGTLVSLSEQQLVDCSYRYGNAGCQGGLMDRAFAYVRNKGY 190

Query: 180 LMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
           +  EE YPY G    CK    +       +  +   DE +L   +++VG ++V+I+AS +
Sbjct: 191 ICSEESYPYVGYMWACKSSSCSPAASCRGYKNIASGDEESLTNAVSSVGTVSVAIDASRY 250

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG 294
           +FQ Y+SG++ D  C+S  +NH +L+VGY         +I+KN WS  WGD GY+ + R 
Sbjct: 251 SFQFYSSGVFYDSDCSSSRLNHGVLVVGYGTYYDGTEYYIVKNSWSSDWGDKGYVLMARN 310

Query: 295 -NNRCGIANYAVY 306
            +N CGIA+ A Y
Sbjct: 311 KDNNCGIASAASY 323


>gi|194757786|ref|XP_001961143.1| GF13722 [Drosophila ananassae]
 gi|190622441|gb|EDV37965.1| GF13722 [Drosophila ananassae]
          Length = 417

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 166/308 (53%), Gaps = 15/308 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +++K+Y  +  +  +   +  N  KI  HNQ    G   Y L  N  +D+    + + M 
Sbjct: 111 EHRKNYLDETEERFRLKIFNENKHKIAKHNQLWASGKVSYKLAVNKYADMLHHEFRQLMN 170

Query: 76  RLTHSRIRRTLVRSPES--------NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              ++ + + L  + ES         E V +P  +DWR+KG +T   +Q  CG+C+AFS 
Sbjct: 171 GFNYT-LHKELRAADESFKGVTFISPEHVTLPKSVDWRDKGAVTGVKDQGHCGSCWAFSS 229

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++GQ ++ +  +  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 230 TGALEGQHYRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYP 289

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+     C F +  I      +  +P  +E  L   +AT+GP++V+I+AS  +FQ Y+ G
Sbjct: 290 YEALDDSCHFNKGTIGATDRGFVDIPQGNEKKLAEAVATIGPVSVAIDASHESFQFYSEG 349

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYM-YLKRGNNRCGIA 301
           +Y + AC +  ++H +L+VG+  +      W++KN W   WGD G++  L+  +N+CGIA
Sbjct: 350 VYVEPACDAQNLDHGVLVVGFGTDESGQDYWLVKNSWGTTWGDKGFIKMLRNKDNQCGIA 409

Query: 302 NYAVYALI 309
           + + Y L+
Sbjct: 410 SASSYPLV 417


>gi|156124998|gb|ABU50817.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 170/306 (55%), Gaps = 15/306 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  + + Y     +  +K  +++N + I  HN +   G   +++  N+ +DL    +   
Sbjct: 37  KSTFGRVYPSPEIELHRKSIFRANLQFILRHNIDYFNGDSTFSVSVNNFTDLSNEEF--- 93

Query: 74  MTRLTHSRIRR----TLVRSPESNESV-LIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
             R T +  RR    +L  S  ++  V  +P  +DW  KG +TP  NQ+ CG+C+AFS  
Sbjct: 94  --RATFNGYRRLAAVSLADSVHADNDVEALPATVDWTTKGVVTPIKNQQQCGSCWAFSAV 151

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
           ++++GQ    T ++  LS Q +VDCS   G++GC+GG +     YV    G+  E  YPY
Sbjct: 152 ASMEGQHALKTGKLVSLSEQNLVDCSAAEGDMGCSGGWMDYAFKYVIQNRGIDTEASYPY 211

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           K     C+FKR ++   I S+  +   DE AL+  +A++GPI+V+I+A+  +FQ Y+SG+
Sbjct: 212 KAIDESCEFKRNSVGATIHSFVDVKTGDESALQNAVASIGPISVAIDAAQPSFQFYSSGV 271

Query: 249 YDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           Y++  C+++ ++H +  VGY T N    W +KN W   WG  GY+++ R   N+CGIA  
Sbjct: 272 YNEPDCSTEILDHGVTAVGYGTLNGAPYWKVKNSWGTSWGRKGYIFMSRNKQNQCGIATK 331

Query: 304 AVYALI 309
           A Y ++
Sbjct: 332 ASYPVV 337


>gi|258588539|pdb|3HWN|A Chain A, Cathepsin L With Az13010160
 gi|258588540|pdb|3HWN|B Chain B, Cathepsin L With Az13010160
 gi|258588541|pdb|3HWN|C Chain C, Cathepsin L With Az13010160
 gi|258588542|pdb|3HWN|D Chain D, Cathepsin L With Az13010160
          Length = 258

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/260 (38%), Positives = 144/260 (55%), Gaps = 14/260 (5%)

Query: 60  NHLSDLHPRHYIKEMTRLTHSRIRRTLV-RSPESNESVLIPDHLDWREKGFITPDWNQED 118
           N   D+    + + M    + + R+  V + P   E+   P  +DWREKG++TP  NQ  
Sbjct: 3   NAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEA---PRSVDWREKGYVTPVKNQGQ 59

Query: 119 CGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAG 178
           CG+C+AFS   A++GQ+F+ T  +  LS Q +VDCS   GN GC GG +     YVQ  G
Sbjct: 60  CGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNG 119

Query: 179 GLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASP 238
           GL  EE YPY+  +  CK+     V + + +  +P Q E AL   +ATVGPI+V+I+A  
Sbjct: 120 GLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPKQ-EKALMKAVATVGPISVAIDAGH 178

Query: 239 HTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMY 290
            +F  Y  GIY +  C+S+ ++H +L+VGY   S        W++KN W   WG  GY+ 
Sbjct: 179 ESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK 238

Query: 291 L-KRGNNRCGIANYAVYALI 309
           + K   N CGIA+ A Y  +
Sbjct: 239 MAKDRRNHCGIASAASYPTV 258


>gi|297663703|ref|XP_002810310.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin S [Pongo abelii]
          Length = 330

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 165/303 (54%), Gaps = 11/303 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  ++ ++L W+ N K +  HN E   G+H Y L  NHL D+     +  
Sbjct: 32  KKTYGKQYKEKNEEAVRRLIWEKNLKFVMIHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL 91

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M+ L   S+ +R +  + +SN + ++PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 92  MSSLRVPSQWQRNI--TYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 149

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T ++  LS Q +VDCS    GN GC GG +     Y+    G+  +  YPYK  
Sbjct: 150 AQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM 209

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++         S ++      E  LK  +A  GP++V ++A   +F LY SG+Y +
Sbjct: 210 VK-CQYDSKYRAATCSKYTDFXYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYE 268

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            +CT + VNH +L+VGY     +  W++KN W  ++G+ GY+ + R   N CGIA++  +
Sbjct: 269 PSCTQN-VNHGVLVVGYGDLNGKEYWLVKNSWGRNFGEEGYIRMARNKGNHCGIASFPSF 327

Query: 307 ALI 309
             I
Sbjct: 328 PEI 330


>gi|198457180|ref|XP_001360577.2| GA18475 [Drosophila pseudoobscura pseudoobscura]
 gi|198135890|gb|EAL25152.2| GA18475 [Drosophila pseudoobscura pseudoobscura]
          Length = 372

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 152/304 (50%), Gaps = 17/304 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K+Y   A  +  +  + +    +   N    +G   Y L  N  SDL    ++ ++T L 
Sbjct: 73  KNYLSAADKALHEGVFAARKNLVDAGNDAFAKGASSYQLAVNAFSDLTKSEFLSQLTGLR 132

Query: 79  HSR-------IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
            S          R L   P       IP+  DWR+KG +T    Q  CG+C+AF+   AI
Sbjct: 133 KSSQGASKATANRKLASVPAGAS---IPESFDWRQKGGVTSVKFQGTCGSCWAFATTGAI 189

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNL-GCAGGSLRNTLNYV-QFAGGLMKEEDYPYK 189
           +G IF+ T  +  LS Q +VDC  +   L GC GG     + ++ +   G+ K + YPY 
Sbjct: 190 EGHIFRKTGTLPNLSEQNLVDCGTLEFGLSGCDGGFQEYAMAFINEEQKGVSKADGYPYI 249

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
             +  CK+ +      I+ ++ +PP+DE  +K  +AT+GP+A S+N      Q Y SGIY
Sbjct: 250 DNKDTCKYSKNLSGAQITGFATIPPKDEALMKKVIATLGPLACSLNGLETLLQ-YKSGIY 308

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAV 305
            DE C     NH++L+VGY     ++ WI+KN W   WG+ GY  L RGNN CGIA    
Sbjct: 309 SDEKCNEGEPNHSILVVGYGSEKGQDYWIVKNSWDKVWGEEGYFRLPRGNNFCGIALECT 368

Query: 306 YALI 309
           Y ++
Sbjct: 369 YPIV 372


>gi|28932704|gb|AAO60046.1| midgut cysteine proteinase 3 [Rhipicephalus appendiculatus]
          Length = 334

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/321 (33%), Positives = 170/321 (52%), Gaps = 20/321 (6%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLH-WQSNHKKIHTHNQEAQQGLHGYTLRE 59
           +   EW        K+Y  D     T+   +L  +  N  KI  HN++  +    Y L  
Sbjct: 22  LIGAEWSAFKSLHGKEYDSD-----TEEYYRLKIYMENRLKIARHNEKYAKSQVSYKLAM 76

Query: 60  NHLSDLHPRHYIKEMTRLTHSRIRRTLVRS------PESNESVLIPDHLDWREKGFITPD 113
           N   DL    ++   TR    R  R   R       PE  E + +P  +DWR+KG +TP 
Sbjct: 77  NEFGDLLHHEFVS--TRNGFKRNYRDTPREGSFFIEPEGFEDLHLPKTVDWRKKGAVTPV 134

Query: 114 WNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNY 173
            NQ  CG+C+AFS   +++GQ F+   ++  LS Q +VDC    GN GC GG + N   Y
Sbjct: 135 KNQGQCGSCWAFSTTGSLEGQHFRKMRKLVSLSEQNLVDCMQKLGNNGCGGGLMDNAFKY 194

Query: 174 VQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVS 233
           ++   G+  E  YPY     +C FK+  +    + +  +P +DE++    +A VGP++V+
Sbjct: 195 IKANKGIDTELSYPYNATDGVCHFKKSGVGATATGFEDIPARDENSWDA-VAPVGPVSVA 253

Query: 234 INASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYM 289
           I+AS  +FQ Y+ G+ D+  C+SD ++H +L+VGY     ++ W++KN W   WGD GY+
Sbjct: 254 IDASHESFQFYSEGVLDEPECSSDQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDEGYI 313

Query: 290 YLKRG-NNRCGIANYAVYALI 309
           Y+ R  +N+CGIA+ A Y L+
Sbjct: 314 YMTRNKDNQCGIASSASYPLV 334


>gi|74927078|sp|Q86GF7.1|CRUST_PANBO RecName: Full=Crustapain; AltName: Full=NsCys; Flags: Precursor
 gi|28971811|dbj|BAC65417.1| crustapain [Pandalus borealis]
          Length = 323

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 8/302 (2%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y     +S +   +    K I  HN+   +G   Y L+ N+ SDL     +  
Sbjct: 24  KTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLAT 83

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
            T +T  R R  L   P+S  +  +   +DWR KG +TP  +Q  CG+C+AFS  +A++G
Sbjct: 84  KTGMT--RRRHPLSVLPKSAPTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEG 141

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
             F  T ++  LS Q +VDCS   GN GC GG       Y+    G+  E  YPYK    
Sbjct: 142 AHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDD 201

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C++   NI   +SS+      DE AL+  +   GP++V I+A   +F  Y  G+Y +  
Sbjct: 202 NCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPN 261

Query: 254 CTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
           C S Y NHA+  VGY  ++     WI+KN W   WG++GY+ + R  +N C IA Y+VY 
Sbjct: 262 CDSWYANHAVTAVGYGTDANGGDYWIVKNSWGAWWGESGYIKMARNRDNNCAIATYSVYP 321

Query: 308 LI 309
           ++
Sbjct: 322 VV 323


>gi|195150387|ref|XP_002016136.1| GL11434 [Drosophila persimilis]
 gi|194109983|gb|EDW32026.1| GL11434 [Drosophila persimilis]
          Length = 372

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 152/304 (50%), Gaps = 17/304 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K+Y   A  +  +  + +    +   N    +G   Y L  N  SDL    ++ ++T L 
Sbjct: 73  KNYLSAADKALHEGVFAARKNLVDAGNDAFAKGASSYQLAVNAFSDLTKSEFLSQLTGLR 132

Query: 79  HSR-------IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
            S          R L   P       IP+  DWR+KG +T    Q  CG+C+AF+   AI
Sbjct: 133 KSSQGASKATANRKLASVPAGAS---IPESFDWRQKGGVTSVKFQGTCGSCWAFATTGAI 189

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNL-GCAGGSLRNTLNYV-QFAGGLMKEEDYPYK 189
           +G IF+ T  +  LS Q +VDC  +   L GC GG     + ++ +   G+ K + YPY 
Sbjct: 190 EGHIFRKTGTLPNLSEQNLVDCGTLEFGLSGCDGGFQEYAMAFINEEQKGVSKADGYPYI 249

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
             +  CK+ +      I+ ++ +PP+DE  +K  +AT+GP+A S+N      Q Y SGIY
Sbjct: 250 DNKDTCKYSKNLSGAQITGFATIPPKDETLMKKVIATLGPLACSLNGLETLLQ-YKSGIY 308

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAV 305
            DE C     NH++L+VGY     ++ WI+KN W   WG+ GY  L RGNN CGIA    
Sbjct: 309 SDEKCNEGEPNHSVLVVGYGSEKGQDYWIVKNSWDKVWGEEGYFRLPRGNNFCGIALECT 368

Query: 306 YALI 309
           Y ++
Sbjct: 369 YPIV 372


>gi|390363592|ref|XP_790934.3| PREDICTED: counting factor associated protein D-like
           [Strongylocentrotus purpuratus]
          Length = 560

 Score =  181 bits (458), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 160/303 (52%), Gaps = 13/303 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++KY K Y+      ++K H+  N + IH+ N+       GY L  NH++D   +   + 
Sbjct: 257 KQKYDKTYKTDVEHVQRKGHFTKNVRMIHSINRANL----GYVLDINHMADQSHQELKRM 312

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
             RL  +R    L           +PDH+DW  +G ++P  +Q  CG+C++F  A  I+G
Sbjct: 313 RGRLRQTRPNNGLPYDGSDISDDAVPDHIDWNVRGAVSPVKDQAVCGSCWSFGSAETIEG 372

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-PYKGKQ 192
            +F  + +   LS Q ++DC+  +GN GC GG       ++   GG+  EE Y PY G+ 
Sbjct: 373 AVFMQSGKRVRLSQQMLMDCTWAAGNNGCDGGEEWRVYEWLMKNGGIPLEETYGPYLGQN 432

Query: 193 SICKF-KRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
            +C + K    V  I  +  +   ++  LK  LAT GPIAV I+A+  +F  Y+ G Y D
Sbjct: 433 GMCHYGKSTPAVASIKKYYNVTSGNQKDLKKALATKGPIAVGIDAAVPSFSFYSYGTYYD 492

Query: 252 EAC--TSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYA 304
            +C  T D ++HA+L VGY  +S     W++KN WS HWG+NGY+ +   +N CG+A  A
Sbjct: 493 ASCGNTVDDLDHAVLAVGYGTDSSGQDYWLIKNSWSTHWGNNGYVAISMKDNNCGVATAA 552

Query: 305 VYA 307
            Y 
Sbjct: 553 TYV 555


>gi|156717488|ref|NP_001096284.1| uncharacterized protein LOC100124852 precursor [Xenopus (Silurana)
           tropicalis]
 gi|134026063|gb|AAI35549.1| LOC100124852 protein [Xenopus (Silurana) tropicalis]
          Length = 333

 Score =  180 bits (457), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 158/303 (52%), Gaps = 12/303 (3%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           K ++K Y+    +  ++  W+   K I  HN E   GLH Y +  NHL D+        M
Sbjct: 35  KTHQKTYKNAEEERARRTIWEETLKFISAHNLEYSLGLHTYEVGMNHLGDMTGEEVAATM 94

Query: 75  TRLTHSRIRRTLVRSPESNESVL---IPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           T  T SR   TL    E+ + +L    P  +DWR KG +TP  NQ  C   YAF+   A+
Sbjct: 95  TGYTGSR--NTLANITEAPKEILEAQPPASIDWRTKGCVTPVKNQGSCRCDYAFAAVGAL 152

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           + Q    T  +   S QQ+VDCS   GN GC GG +  +  Y++   GLM+E  YPY+GK
Sbjct: 153 ECQWKIKTGSLFTFSPQQLVDCSYTEGNNGCYGGYIMYSFTYMKKY-GLMQEPAYPYEGK 211

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
           +  C  K+P+    +  +  +P  + +AL   +  VGP++V I+A    F++Y SG+Y D
Sbjct: 212 EGKCTKKKPSNTGVVKQFYRIPSGNGNALMKAVGRVGPVSVWIDAGQQGFRMYKSGVYYD 271

Query: 252 EACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNR-CGIANYAVY 306
             CT+ + NH +L+VGY        W++KN W   +G  GY+ + R  ++ CGI   AVY
Sbjct: 272 PQCTT-HTNHVVLIVGYGTAKGSKYWLVKNSWGKGYGHKGYIKMARNYDKDCGITLRAVY 330

Query: 307 ALI 309
             +
Sbjct: 331 PTV 333


>gi|391340505|ref|XP_003744580.1| PREDICTED: digestive cysteine proteinase 1-like [Metaseiulus
           occidentalis]
          Length = 469

 Score =  180 bits (457), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 158/286 (55%), Gaps = 15/286 (5%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK-----EMTRLTHSRIRRTLVR 88
           +Q N   I   N E +    GYTL     +D+    + +      M   T +++R+ L R
Sbjct: 189 FQRNLAHIEKFNAE-KAASRGYTLGITQFADMSTAEFRQTYLGLRMNASTIAKLRK-LQR 246

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
              +++  L P+ +DWR+KG ++P  +Q  CG+C+AFS + AI+GQ F    E+  LS Q
Sbjct: 247 EVVADDRDL-PEAVDWRDKGAVSPVKDQGQCGSCWAFSTSGAIEGQHFLKNGELLSLSEQ 305

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
           Q+VDCS +  + GC GG     + YV+F GGL  E  YPYKG    C   + +    I+ 
Sbjct: 306 QMVDCSWL--DFGCNGGQPMLAMEYVRFNGGLELETAYPYKGVGGSCHSDKKSAAAKITG 363

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           + +     E AL+  +A VGPI+V ++AS   FQ Y SGIY+ E+C+S  ++HA+L VGY
Sbjct: 364 FWMAGFYSESALQKAVAKVGPISVGMDASGEDFQHYKSGIYNPESCSSIGLDHAVLAVGY 423

Query: 269 TRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
             +     W++KN W+  WG+ GY  L R   N+CGIA   +Y  +
Sbjct: 424 GTSDDGDYWLVKNSWNTSWGEKGYFKLPRNKGNKCGIATTPIYPTV 469


>gi|58332124|ref|NP_001011214.1| cathepsin S, gene 2 precursor [Xenopus (Silurana) tropicalis]
 gi|56556518|gb|AAH87770.1| cathepsin S [Xenopus (Silurana) tropicalis]
          Length = 332

 Score =  180 bits (457), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 164/301 (54%), Gaps = 9/301 (2%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           K ++K Y+    +  ++  W+   K I  HN E   GLH Y +  NHL D+        M
Sbjct: 35  KTHQKSYKDTEEERTRRTIWEETLKFITVHNLEYSLGLHTYEVGMNHLGDMTGEEVAATM 94

Query: 75  TRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           T  T S      +   P+  +    P  +DWR +  +TP  +Q  CG CYAFS   A++ 
Sbjct: 95  TGYTGSGGSLANMTEVPKEIQEAQPPASIDWRTQACVTPVRDQGPCGCCYAFSAVGAMEC 154

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q  +    +  LS Q++VDCS   GN GC GG L +   Y+    G+M+E  Y Y G+++
Sbjct: 155 QAKRKRGMLFTLSPQELVDCSDTEGNNGCKGGRLMSAFTYM-MKHGVMEENAYRYTGQEA 213

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C+ ++ +  + +++   +   DE+ L   + TVGP++V+I+++   F+LY SG+Y D  
Sbjct: 214 DCR-RQVHTGLKVTAIHNVAAGDENVLMHAVGTVGPVSVNIDSNRKGFRLYKSGVYYDPY 272

Query: 254 CTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           CT++ ++H++L+VGY  ++    W++KN W   +GD GY+ + R  NN CGIA  AV+  
Sbjct: 273 CTTN-LDHSVLVVGYGTDNGNDYWLVKNSWGAGYGDKGYIKMARNRNNHCGIAQEAVFPT 331

Query: 309 I 309
           I
Sbjct: 332 I 332


>gi|33242867|gb|AAQ01138.1| cathepsin [Branchiostoma lanceolatum]
          Length = 327

 Score =  180 bits (456), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 169/317 (53%), Gaps = 14/317 (4%)

Query: 2   TNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENH 61
           T+ EW    +   K+Y         DS +   +Q N K +  HN+EA  G H + ++ N 
Sbjct: 16  TDNEWEAFKLLHGKQYSV-----YEDSARHAIFQENSKSVKQHNEEAAMGKHTFFMKMNK 70

Query: 62  LSDLHPRHY---IKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQED 118
           L D+    +   +     +  ++  +      ES   + + D +DWR++G +T   NQE 
Sbjct: 71  LGDMTNEEFQMLVSGSGLMQTNKTEQAEGGVFESMPGLKVNDTVDWRQQGAVTKVKNQEQ 130

Query: 119 CGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAG 178
           CG+C+AFS   +++GQ F  +  +  LS Q ++DCS   GN GC GG +     Y++  G
Sbjct: 131 CGSCWAFSTTGSLEGQHFLKSGTLVSLSEQNLMDCSRKGGNKGCKGGLMDQAFKYIKTNG 190

Query: 179 GLMKEEDYPYKGK-QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
           G+  EE YPYKGK +  C +K       ISS+      DE AL    AT+GPI+  I+AS
Sbjct: 191 GIDTEECYPYKGKDEKECDYKSSCSGATISSFVDFKAGDEEALMQAAATIGPISFGIDAS 250

Query: 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR 293
             +FQLY  G+Y ++ C+S  ++H +L+VGY     ++ W++KN W   WG  GY+ + R
Sbjct: 251 HPSFQLYDHGVYHEKRCSSKKLDHGVLVVGYGTHGNKDYWLVKNSWGAEWGMEGYIMMSR 310

Query: 294 G-NNRCGIANYAVYALI 309
             +N+CGIA  A Y ++
Sbjct: 311 NKDNQCGIATQASYPVV 327


>gi|410968392|ref|XP_003990691.1| PREDICTED: cathepsin S, partial [Felis catus]
          Length = 310

 Score =  180 bits (456), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 102/270 (37%), Positives = 146/270 (54%), Gaps = 9/270 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K Y K Y++K  +  ++L W+ N K +  HN E   G+H Y L  NHL D+     I  
Sbjct: 44  KKTYGKQYKEKNEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVISL 103

Query: 74  MTRL-THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           M  L   S+ +R +     SN+   +PD +DWREKG +T    Q  CGAC+AFS   A++
Sbjct: 104 MGCLRVPSQWQRNVTYKSNSNQK--LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALE 161

Query: 133 GQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
            Q+   T  +  LS Q +VDCS    GN GC GG +     Y+    G+  E  YPYK  
Sbjct: 162 AQLKLKTGNLVSLSAQNLVDCSTEKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAM 221

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++   N     S ++ LP   E  LK T+A  GP++V+I+AS  +F LY SG+Y +
Sbjct: 222 DGKCQYDSKNRAATCSKYTELPFGSEEDLKETVANKGPVSVAIDASHSSFFLYRSGVYYE 281

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKN 277
            ACT   VNH +L+VGY     ++ W++KN
Sbjct: 282 PACTQT-VNHGVLVVGYGNLNGKDYWLVKN 310


>gi|326431661|gb|EGD77231.1| cysteine protease [Salpingoeca sp. ATCC 50818]
          Length = 347

 Score =  180 bits (456), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 156/305 (51%), Gaps = 16/305 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + KY K Y     ++++   +Q +   I  HN EA  G+H Y +  N  +DL    + + 
Sbjct: 35  KDKYNKVYESAEEEARRAAIFQESLDFIEKHNAEAAAGMHTYLVGVNEFADLTREEFRQH 94

Query: 74  -MTRLTHSRIRRTLVRSP--------ESNESVLIPDHLDWREKGFITPDWNQEDCGACYA 124
            +TRL     +R  V +          + +S      +DWR++G +TP  NQ  CG    
Sbjct: 95  HVTRLPFDDDKRDPVTATLHLDEHAVHAADSNGDSSGIDWRKRGAVTPVRNQGQCGNPAI 154

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           F+   A++G    S+  + ELS QQV+DCS   G  GC+GGSL +   Y+   GGL    
Sbjct: 155 FAAVEAVEGMHAISSGNLVELSTQQVIDCS---GTPGCSGGSLVSFFKYIARNGGLDSAA 211

Query: 185 DYPYKGKQSIC-KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
           DYP  G    C K K    V  +  +SV+PP++E  L   +  + P+AV+I A   +FQ+
Sbjct: 212 DYPTSGAGGQCNKAKEARHVAKVGGYSVVPPRNETKLAAAVFKM-PVAVAIEADTPSFQM 270

Query: 244 YASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANY 303
           Y SG+Y     T   ++HA+L+VGYT   WI+KN W   WGD GY+ +KRG    GI   
Sbjct: 271 YTSGVYSGPCGTQ--LDHAVLVVGYTDEYWIVKNSWGASWGDQGYIMMKRGVGAAGICGI 328

Query: 304 AVYAL 308
            + A+
Sbjct: 329 TLDAM 333


>gi|312306194|gb|ADQ73946.1| cathepsin L [Paralithodes camtschaticus]
          Length = 324

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 155/299 (51%), Gaps = 7/299 (2%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +Y + Y     +  +   +  N + I  HN++   G   Y L  N   D+        M 
Sbjct: 28  QYGRQYATAQEERYRSSVYDQNMEFIEAHNEQYTNGEVTYMLAINQFGDMTNEEINAVMN 87

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
            L  +   R +      +++  +P  +DWR KG +TP  +Q+ CG+C+AFS   +++GQ 
Sbjct: 88  GLLPASESRGVAVLGGRDDT--LPAEVDWRTKGAVTPVKDQKACGSCWAFSATGSLEGQH 145

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F    ++  LS Q +VDCS   G+ GC GG +     Y++  GG+  E  YPY+     C
Sbjct: 146 FLKDGKLVSLSEQNLVDCSTKQGDHGCGGGLMDFAFTYIKDNGGIDTEASYPYEATDGKC 205

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           ++   N    ++ +  +    E AL+  +AT+GPI+V+I+AS  TF  Y  G+Y D+ C+
Sbjct: 206 QYNPANSGATVTGYVDVEHDSEDALQKAVATIGPISVAIDASRSTFHFYHKGVYYDKECS 265

Query: 256 SDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           S  ++H +L VGY        W++KN W+  WG++G++ + R  NN CGIA  A Y L+
Sbjct: 266 STSLDHGVLAVGYGTQDGTDYWLVKNSWNITWGNHGFIEMSRNRNNNCGIATQASYPLV 324


>gi|2804266|dbj|BAA24444.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 166/301 (55%), Gaps = 16/301 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           ++ K+Y  +  +  +   +  N  K+  H++   QG   + L  N  +D+    ++  + 
Sbjct: 33  QHSKNYDSETEERFRMKIFMENDHKVAKHSKLFSQGFVKFKLGLNKYADMLHHEFVSTLN 92

Query: 76  RLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDWNQEDCGACYAFSI 127
               ++ +  +++  + N++V         +PD +DWR+KG +T   +Q  CG+C++FS 
Sbjct: 93  GF--NKTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTKVKDQGHCGSCWSFSG 150

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
           + +++GQ F+ T ++  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 151 SGSLEGQHFRKTGKLVSLSEQNLVDCSGRYGNTGCNGGLMDNAFRYIKDNGGIDTEQSYP 210

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y  +   C +K  N       +  +   +E  LK  +ATVGP++++I+AS  TFQLY+ G
Sbjct: 211 YLAEDEKCHYKTQNSGATDKGFVDIEEGNEDDLKAAVATVGPVSIAIDASYETFQLYSDG 270

Query: 248 IYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           +Y D  C+S  ++H +L+VGY      ++ W++KN W    G NGY+ + R  +N CG+A
Sbjct: 271 VYSDPECSSQELDHGVLVVGYGTSDDGQDYWLVKNSWRPSCGLNGYIKMARNQDNMCGVA 330

Query: 302 N 302
           +
Sbjct: 331 S 331


>gi|530736|emb|CAA56915.1| cathepsin l [Nephrops norvegicus]
 gi|1582621|prf||2119193B cathepsin L-related Cys protease
          Length = 313

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 164/303 (54%), Gaps = 14/303 (4%)

Query: 17  YKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK 72
           +K  Y +K  D+K++L+    +Q N + +   N++ + G   + +  N   D+    +  
Sbjct: 15  FKTQYGRKYGDAKEELYRQRVFQQNEQLVEAFNKKFENGEVTFKVAMNQFGDMTNEEFNA 74

Query: 73  EMTRLTH-SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
            M      SR   T V + E      +   +DWR KG +TP  +Q  CG+C+AFS   ++
Sbjct: 75  VMKGYKKGSRGEPTTVFTAEGRP---MAADVDWRTKGAVTPVKDQGQCGSCWAFSATGSL 131

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           +GQ F   +E+  LS Q++VDCS   GN GC GG + +  +Y++  GG+  E  YPY+ +
Sbjct: 132 EGQHFLKNNELVSLSEQELVDCSTEYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAQ 191

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C+F   +I    + + V     E AL   ++ +GPI+V+I+AS  +FQ Y+SG+Y +
Sbjct: 192 DRSCRFDANSIGATCTGF-VEVQHTEEALHEAVSDIGPISVAIDASHFSFQFYSSGVYYE 250

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           + C+   ++H +L VGY    T + W++KN W   WGD GY+ + R  +N CGIA+   Y
Sbjct: 251 KKCSPTNLDHGVLAVGYGTESTEDYWLVKNSWGSGWGDAGYIKMSRNRDNNCGIASEPSY 310

Query: 307 ALI 309
             +
Sbjct: 311 PTV 313


>gi|3243102|gb|AAC23951.1| silicatein alpha [Tethya aurantium]
          Length = 330

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/304 (34%), Positives = 160/304 (52%), Gaps = 14/304 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K++ K Y     + +K L W SN K I  HN  A     G+TL  NHL D+    Y + 
Sbjct: 33  KKQHDKSYSTNLEELEKHLVWLSNKKYIELHNANADT--FGFTLAMNHLGDMTDHEYKER 90

Query: 74  MTRLTHSR---IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
               T+S+     +   R P     +  P+ +DWR KG +T   +Q DCGA YAFS   A
Sbjct: 91  YLTYTNSKSGNYTKVFKREPW----MAYPETVDWRTKGAVTGIKSQGDCGASYAFSAMGA 146

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++G    +T ++  LS Q ++DCS+  GN GC GG++     YV    G+     YP++G
Sbjct: 147 LEGINALATGKLTYLSEQNIIDCSVPYGNHGCKGGNMYVAFLYVVANEGVDDGGSYPFRG 206

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           KQS C ++       +S    +    E  L+  +A VGP+AV+I+   + F+ Y SG+YD
Sbjct: 207 KQSSCTYQEQYRGASMSGSVQINSGSESDLEAAVANVGPVAVAIDGESNAFRFYYSGVYD 266

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
              C+S  +NHAM++ GY     +  W+ KN W  +WG+ GY+ + R   N+CGIA+ A 
Sbjct: 267 SSRCSSSSLNHAMVITGYGISNNQEYWLAKNSWGENWGELGYVKMARNKYNQCGIASDAS 326

Query: 306 YALI 309
           Y  +
Sbjct: 327 YPTL 330


>gi|432882407|ref|XP_004074015.1| PREDICTED: cathepsin K-like [Oryzias latipes]
          Length = 330

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 165/298 (55%), Gaps = 5/298 (1%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++K+ K Y  +   + ++  W+ N   +  HNQ+A +  H +T+  NHLSD+      ++
Sbjct: 30  KQKHDKSYSNQTEMNFRRAVWEKNLHVVMKHNQQATEEKHSFTVGLNHLSDMTAEEINEK 89

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           +              + + +  V  P  +DWR+ G + P  NQ  CG+C+AFS   A++G
Sbjct: 90  LNGFKMEEHADYRNHTSKLSSGVSTPASVDWRKSGLVGPVTNQGLCGSCWAFSSLGALEG 149

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
           Q+ K    +  LS Q +VDCS + GNLGC GG +  + +YV    G+  EE YPY+ +  
Sbjct: 150 QLRKQRGVLVPLSPQNLVDCSTVDGNLGCGGGYITKSYSYVIRNKGVDSEEFYPYEHQNR 209

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C++         SS+ +LP  DE AL+  +A VGP+AV++NA   +F  Y  G+YDD  
Sbjct: 210 KCRYSVTGKAGYCSSFHILPRGDEGALQAAVAAVGPVAVAVNAMLPSFHSYRGGLYDDLQ 269

Query: 254 CTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           C S  VNHA+L+VGY   +    W++KN W   WG+ G++ + R  +N CGIA +AVY
Sbjct: 270 CNSMLVNHAVLVVGYGSEAGQDYWLVKNSWGSGWGEEGFIRIARNKSNLCGIATFAVY 327


>gi|167427531|gb|ABZ80402.1| cathepsin L6, partial [Fasciola hepatica]
          Length = 306

 Score =  179 bits (454), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/298 (35%), Positives = 156/298 (52%), Gaps = 16/298 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  Y L  N  +DL        
Sbjct: 5   KRMYNKEY-NGADDEHRRNIWEQNVKHIEEHNLRHDLGLVTYKLGLNQFTDLTFEEFKAK 63

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+  + S +   +    E N+   +P  +DWR+ G++T   +Q  CG+C+AFS   
Sbjct: 64  YLMEMSPESES-LSDGISYEAEGND---VPASIDWRQYGYVTEVKDQGGCGSCWAFSTTG 119

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           AI+GQ  K        S QQ+VDCS I GN GC GG +R    Y++   GL  E  YPYK
Sbjct: 120 AIEGQYVKKFQTRVSFSEQQLVDCSTIPGNHGCRGGGMRRAYEYLK-KNGLEPESSYPYK 178

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
             +  C++K    +  +++  ++   +E  LK  +   GP +V+++  P  F +Y SGIY
Sbjct: 179 AVEGQCQYKSDLALAKVTNSQLVRSGNETQLKNLIGAEGPASVAVDVKPD-FSMYRSGIY 237

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
             + C+S  +NHA+L VGY        WI+KN W   WG+ GY+ + R  NN CGIA+
Sbjct: 238 QSQTCSSRRMNHAVLAVGYGTEGGMDYWIVKNSWGPRWGEAGYIRMARNRNNMCGIAS 295


>gi|344250850|gb|EGW06954.1| Cathepsin R [Cricetulus griseus]
          Length = 279

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 152/283 (53%), Gaps = 17/283 (6%)

Query: 39  KKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL---THSRIRRTLVRSPESNES 95
           K I  HN+E   G +G+ +  N   D+    + K M  +   TH+  +   +R  E+   
Sbjct: 2   KMIKHHNEENSLGKNGFIMEINEFGDMTVEEFRKTMNYIPVRTHTEGKS--IRKREAGG- 58

Query: 96  VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSI 155
            ++P  ++WR+KG++T    Q  C +C+AF++  AI+GQ+FK T  +  LS+Q +VDCS 
Sbjct: 59  -VLPKSVNWRKKGYVTSVKKQAYCNSCWAFAVNGAIEGQMFKKTGNLTRLSVQNLVDCSK 117

Query: 156 ISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQ 215
             GN GC  G       YV   GG+  E  YPY+GK+  C++       +I+ +  L P+
Sbjct: 118 PHGNNGCDWGDPYIAYEYVLHNGGVEAEATYPYEGKEGPCRYNPKYSAANITGFVSL-PK 176

Query: 216 DEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY------- 268
            E +L   +AT+GPI+  I+ +   F  Y  GI+ D  C +D VNH +L+VGY       
Sbjct: 177 SEESLMAAVATIGPISAGIDIASDFFMFYKKGIFYDPKCHNDTVNHVVLVVGYGFEGNET 236

Query: 269 -TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              N W++KN +   WG  GYM + K  NN C IA+YA Y ++
Sbjct: 237 DGNNYWLVKNSYGKKWGLRGYMKIAKDQNNHCAIASYAHYPIV 279


>gi|194741328|ref|XP_001953141.1| GF17358 [Drosophila ananassae]
 gi|190626200|gb|EDV41724.1| GF17358 [Drosophila ananassae]
          Length = 329

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 162/310 (52%), Gaps = 12/310 (3%)

Query: 5   EWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSD 64
           +W    +F +KKY+ +      D+ +   ++ N + I  HN++ + G   + +  N  +D
Sbjct: 27  DWSYFKLFNEKKYQDE----TVDAVRFEIFKENRQYIAQHNRKWENGEVSFRIDINEYAD 82

Query: 65  LHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYA 124
           L   H   EM        R     +        +P+++DWR  G +TP  NQ+ C +C+A
Sbjct: 83  L-LNHEFNEMRNGNDQNGRSIKGSTFIPPMGFTLPENIDWRSLGAVTPVKNQKYCDSCWA 141

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           F+ A A++GQ F+ T  +  LS Q ++DCS+   N GC  G        ++  GG+  E 
Sbjct: 142 FAAAGALEGQHFRHTGNLVSLSEQNLLDCSV--SNNGCKSGLASRAFLDIKKEGGIATES 199

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            Y Y+  Q +C+          + +  L   +E  L + +ATVGPIAVS+++S   F LY
Sbjct: 200 SYSYEATQKLCRLNNATFGASDTGFVQLEFGNETQLAIAVATVGPIAVSLDSSSILFHLY 259

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTR----NSWILKNWWSHHWGDNGYMYLKR-GNNRCG 299
            SGIYD+  C+   + HA L+VGY      + W++KN W  HWG+NGY+ ++R   N+CG
Sbjct: 260 HSGIYDNPLCSDTNLIHAALVVGYGTEKGIDYWLVKNSWGEHWGENGYIKMRRNAGNQCG 319

Query: 300 IANYAVYALI 309
           IA  AVY L+
Sbjct: 320 IATKAVYPLL 329


>gi|208972994|dbj|BAG74346.1| silicatein-G1 [Ephydatia fluviatilis]
          Length = 347

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT--- 75
           + Y  K  D +K   W++N   I  HN++A++  HG+ L+ N   D+    +  +     
Sbjct: 44  RRYLDKGEDQQKFSIWKANMDYIEKHNKDAEK--HGFVLKMNKFGDMTRNEFFSDYQCVQ 101

Query: 76  ------RLTHSRIRRTLVRSPESNESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
                 +  HS       R+ +     L +P+ +DWR+ G +T   +Q  CGA YAFS  
Sbjct: 102 SIGPEWKDVHSMKSAYGSRASQYKAVNLSLPESIDWRDAGIVTGVKDQLRCGASYAFSTV 161

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++G        + +LS Q VVDCS   GN GC  GS+ NT  Y+   GG+     YPY
Sbjct: 162 GALEGMNALGKGSLVKLSEQNVVDCSGPYGNHGCTCGSVINTYLYIIDNGGIDTASSYPY 221

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           K KQ  CKF   N+    + + ++    E  L   +AT GP+AV ++A+ + FQ Y+ GI
Sbjct: 222 KSKQYYCKFSTSNVGAKATGFVLISSGSESDLMSAVATAGPVAVHVDANSYAFQFYSDGI 281

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANY 303
            D   C+S  ++H +L+VGY     ++ W++KN W  +WG NGY  + R   N+CGIA  
Sbjct: 282 LDVVYCSSTNLSHTVLVVGYGTYKNKDYWLIKNSWGPNWGINGYAMMARNRYNQCGIATA 341

Query: 304 AVY 306
           A +
Sbjct: 342 ASF 344


>gi|340370388|ref|XP_003383728.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 398

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 130/219 (59%), Gaps = 7/219 (3%)

Query: 96  VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSI 155
           V  PD +DWREKG +TP  +Q  CG+C+AFS   +++GQ F +T  +  LS QQ+VDCS+
Sbjct: 181 VKAPDTVDWREKGAVTPIKDQGQCGSCWAFSAIGSLEGQHFINTGNLVSLSEQQLVDCSL 240

Query: 156 ISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQ 215
              N GC GG L     Y++   G   E DYPY  K   C++     V  ++ ++ LP  
Sbjct: 241 --KNDGCNGGMLSTAFKYIESVAGEESETDYPYTAKNGTCQYDPSKAVAKVTGYTALPSG 298

Query: 216 DEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRN 271
           DE +L   + + GPI+V I+AS  +FQLY+ G+Y +++C+   ++H +L+VGY    T +
Sbjct: 299 DEDSLNDAVTSKGPISVCIDASHKSFQLYSEGVYYEKSCSYFLLDHCVLVVGYGTEDTAD 358

Query: 272 SWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
            W++KN W   WG  GY+ + R   N CGIA  A Y L+
Sbjct: 359 YWLVKNSWGTSWGMKGYIRMSRNRKNNCGIATNAAYPLV 397



 Score = 77.0 bits (188), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 17/155 (10%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           KY K Y  K T+ ++++ W+SN K +  HN  + +   G+T+  N  +DL    + K   
Sbjct: 34  KYNKVYETKETELERQIIWESNKKFVENHNANSDK--FGFTVAMNEFADLDADAFSKLKK 91

Query: 76  RLTHSRIRRTLVRSPESNESVL-----IPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
             +H         +  +N  VL     +P+ +DWR+KG +TP  +Q  CG  + + I  +
Sbjct: 92  IPSHP--------AQANNNKVLLTGGNVPNSIDWRKKGAVTPVSSQGQCGV-WPWPIVGS 142

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGG 165
           ++ Q F  T  +  LS+QQ++DC+ I+ NL  AG 
Sbjct: 143 VESQYFIKTGTLVPLSVQQILDCANIT-NLDEAGA 176


>gi|10441624|gb|AAG17127.1|AF190653_1 cathepsin L-like cysteine proteinase CAL1 [Diabrotica virgifera
           virgifera]
          Length = 322

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 167/308 (54%), Gaps = 26/308 (8%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY----- 70
           ++ K Y+    +  +   +Q+N K I+ HN + +QGL GYT+  N  +D+ P  +     
Sbjct: 27  QHGKVYKNPIEERVRFSVFQANLKTINEHNAKYEQGLVGYTMAVNQFADMTPEEFKAKLG 86

Query: 71  --IKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
              K M ++  SR  +        N +  +PD +DWR+KG +    +Q  CG+C+AFS  
Sbjct: 87  MQAKNMPKIKKSRHVK--------NVNAEVPDSVDWRQKGAVLGVKDQGQCGSCWAFSAT 138

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGC-AGGSLRNTLNYVQFAGGLMKEEDYP 187
            +++GQ +    + E LS Q+++DCS+  GN  C  GG +     +V+   G++ E  YP
Sbjct: 139 GSLEGQNYIVNGKSEPLSEQELLDCSVEYGNGDCDEGGLMTLAFEFVE-ENGIVSEASYP 197

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y+  Q  C+      V+ I  ++ + P +E AL+  + TVGPI+ +I A P   Q ++SG
Sbjct: 198 YEAIQGDCRTTNDKAVLHIQGYNEVYPSEE-ALRQAVGTVGPISAAIWAEP--IQFFSSG 254

Query: 248 IYDDEACTS--DYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIA 301
           IYDD  C +  +Y++H +L+VGY   +    WI+KN W   WG+ GY  LKR    CG+A
Sbjct: 255 IYDDPNCLNYVEYLDHGILVVGYGEENGTPYWIVKNSWGATWGEEGYFRLKRNIALCGLA 314

Query: 302 NYAVYALI 309
             A Y ++
Sbjct: 315 QMASYPVL 322


>gi|289741839|gb|ADD19667.1| cysteine proteinase cathepsin L [Glossina morsitans morsitans]
          Length = 365

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 148/273 (54%), Gaps = 11/273 (4%)

Query: 47  EAQQGLH-GYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVR----SPESNESVLIPDH 101
           EA+  LH GY L  N  +DL    ++ ++T    S      V+    + + N +  +PD 
Sbjct: 94  EAENQLHAGYELALNAFADLTKEEFLSQLTGNHKSPQAEAKVKNRRLALKLNTTAKLPDS 153

Query: 102 LDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNL- 160
            DWRE G +TP   Q  CG+C+AF++  A++G  F+ + ++  LS Q +VDC   +  L 
Sbjct: 154 FDWREHGAVTPVKFQGKCGSCWAFAVTGALEGHSFRKSGKLINLSEQNLVDCGEKAYGLD 213

Query: 161 GCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHAL 220
           GC GG       ++    G+     Y Y  K++ C +++     ++  +SV+PP DE  +
Sbjct: 214 GCDGGYQEYGFEFISRQNGVAHGAKYLYVDKKNTCSYRKTFKAAELKGFSVIPPNDEETM 273

Query: 221 KVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILK 276
           K  +AT+GP+A SINA   T  LY  GIY DE C  D  NH++L+VGY     ++ WI+K
Sbjct: 274 KKVVATLGPLACSINA-LETLLLYKKGIYADEECNKDEPNHSVLVVGYGTEDDQDYWIVK 332

Query: 277 NWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           N W + WG+ GY  L RG N C IA+   Y ++
Sbjct: 333 NSWDNVWGEEGYFRLPRGKNFCKIASECSYPVL 365


>gi|197205900|gb|ACH48003.1| cathepsin [Latrunculia oparinae]
          Length = 351

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 155/294 (52%), Gaps = 24/294 (8%)

Query: 37  NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM------------TRLTHSRIR- 83
           N   I +HN  A +   G+TL  N   D+    Y + M            +R T   +  
Sbjct: 61  NTAYIPSHNSYADK--FGFTLAMNKYGDMTSEEYSQSMRCVEKFLLPSSPSRPTQPPVSG 118

Query: 84  -RTL--VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTS 140
            RT   + +P + E+V  P+ +DWR KG ++   +Q  C +CYAF+  +A++G    +T 
Sbjct: 119 IRTCHSLMAPNTPETVC-PEEVDWRTKGAVSAVKDQGRCKSCYAFATTAALEGMHALATG 177

Query: 141 EIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRP 200
            +  LS Q V+DCS+  GN GC+GGS   T+ Y    GG+     YPY G+Q +CKF   
Sbjct: 178 RLVPLSEQNVIDCSVPYGNRGCSGGSRMATIMYAVDNGGIDGTSSYPYLGRQYLCKFTEE 237

Query: 201 NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVN 260
           +I    +    +    E  LK  +A VGP+ V++++   +FQ YASGIY + +C+   + 
Sbjct: 238 SIATGCTGMVRIKRGKEQDLKKAVAVVGPVTVAVDSRHTSFQFYASGIYSEPSCSRTKLT 297

Query: 261 HAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           H ++++GY   S    W+LKN W   WG++GY+ + R   N+CGIA  A+Y  I
Sbjct: 298 HTLIIIGYGSKSGHDYWLLKNSWGTSWGEDGYIMMSRNYANQCGIATKAMYTTI 351


>gi|195984441|gb|ACG63793.1| silicatein A1 [Latrunculia oparinae]
          Length = 329

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 157/299 (52%), Gaps = 10/299 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++   Y     D  K L   SN K I  HN  A   + GY+L  NH  DL    + ++
Sbjct: 32  KNRHGMSYESDLHDLDKHLVRLSNKKFIELHN--ANSHIFGYSLAMNHFGDLTDLEWNEK 89

Query: 74  M-TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
             T  + S    T V   +  +S   P+ +DWR KG +T   +Q  CGA YAFS  +A++
Sbjct: 90  YGTYSSSSAGNYTKVFKADPYQS--YPESVDWRTKGAVTSVKDQSQCGASYAFSAMAALE 147

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           G    +T  +  LS Q ++DCS+  GN GC GG++     YV    G+     YP+ GKQ
Sbjct: 148 GANALATDTLVNLSEQNLIDCSVPYGNHGCKGGNMLYAFKYVIANEGVDTANSYPFYGKQ 207

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
           S C +      V IS    +    E  L   +A VGP+AV+I+ S + F+ Y+SG+YD  
Sbjct: 208 SSCVYNEKYAAVKISGMVRISQGSESDLLGAVANVGPVAVAIDGSSNAFRFYSSGVYDSS 267

Query: 253 ACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            C+S  +NHA+++ GY   S    W++KN W  +WG+ GY+ + RG  N+CGIA+ A Y
Sbjct: 268 RCSSSKLNHAIVVTGYGSYSGKKYWLVKNSWGKNWGNYGYIMMARGKYNQCGIASDASY 326


>gi|42564163|gb|AAS20593.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 324

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 163/300 (54%), Gaps = 12/300 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y+    + ++   + SN  +I  HNQ   +GL  Y +  N  +DL P  +++    
Sbjct: 30  FSKSYQNVVEEKRRFNIFLSNLLRIEEHNQNFSRGLSTYEMGVNKFADLTPEEFMERFRP 89

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L  ++  + L    + N    +P  +DW ++G +T   +Q  CG+C+AFS   +++   F
Sbjct: 90  LRKTK-PKFLSEQAKFNFDGDLPAEVDWTKQGAVTEVKSQGSCGSCWAFSTTGSVESHNF 148

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
             T ++  LS QQ+VDC  +  N GCAGG +   L Y++ A G+M E+DYPY+ + + C+
Sbjct: 149 IKTGKLISLSEQQLVDC--VKNNSGCAGGWMDIALEYIE-ADGIMSEDDYPYEERNTTCR 205

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC-- 254
           F      V I S+  +   DE  L+  +A  GP++V+I  +   FQLYA GI +D  C  
Sbjct: 206 FNNSKAAVQIKSYKAIKKNDEIDLQKAVALEGPVSVAIEVTI-AFQLYARGILNDPQCKN 264

Query: 255 TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
           T   + HA+L+ GY     ++ WI+KN W   +G +GY+ + R  +N+CGIA  A Y ++
Sbjct: 265 TEGDLTHAVLVTGYGSQDGKDYWIVKNSWGAEYGMDGYLRMSRNADNQCGIATRASYPVL 324


>gi|246148|gb|AAB21516.1| Cyclic Protein-2 [Rattus sp.]
          Length = 247

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/221 (41%), Positives = 133/221 (60%), Gaps = 10/221 (4%)

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
           IP  +DWREKG +TP  NQ  CG+C+AFS +  ++GQ+F  T ++  LS Q +VDCS   
Sbjct: 27  IPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQ 86

Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
           GN GC GG +     Y++  GGL  EE YPY+ K   CK++    V + + + V  PQ E
Sbjct: 87  GNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGF-VDIPQQE 145

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----- 272
            AL   +ATVGPI+V+++AS  + Q Y+SGIY +  C+S  ++H +L+VGY         
Sbjct: 146 KALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNK 205

Query: 273 ---WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              W++KN W   WG +GY+ + K  NN CG+A  A Y ++
Sbjct: 206 DKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 246


>gi|15593255|gb|AAL02223.1|AF410883_1 cysteine protease CP19 precursor [Frankliniella occidentalis]
          Length = 334

 Score =  178 bits (452), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 7/300 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y     ++ +   ++ N  +I  HN     G   + +  N  +D+H     +++  
Sbjct: 35  HAKTYANAVEEAYRAKVFKENAIRIAKHNDLFASGEVTFKVGYNQYADMHTHEVTEKLNG 94

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
                 + +      SN+S      +DWR KG  TP  +Q  CG+C++FS   +++GQ+F
Sbjct: 95  YRSGLKQASAFVHTASNDSWPWSKKVDWRSKGAATPIKDQGQCGSCWSFSATGSLEGQLF 154

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSIC 195
                +  LS Q +VDCS   GN GC GG + +   YV+  GG+  EE YPY       C
Sbjct: 155 LKNKNLVSLSEQNLVDCSWDFGNEGCNGGLMDSAFEYVKSNGGIDTEESYPYTAVDGDSC 214

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
            ++  N     + +  +  + E AL+  +  VGP++V+I+AS  +FQ+Y+SGIY + AC+
Sbjct: 215 LYRAANNAGVNTGYKDVQAKSESALRDAVEKVGPVSVAIDASNWSFQMYSSGIYYESACS 274

Query: 256 SDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           SDY++H +L VGY      +  WI+KN W   WG+ GY+ + R   N CGIA  A Y L+
Sbjct: 275 SDYLDHGVLAVGYGSEWPNKEFWIVKNSWGTSWGEEGYIKMARNKKNNCGIATEASYPLV 334


>gi|167427523|gb|ABZ80398.1| cathepsin L3, partial [Fasciola hepatica]
          Length = 306

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 159/305 (52%), Gaps = 16/305 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN    +GL  Y L  N  +DL        
Sbjct: 5   KRMYNKEY-NGADDEHRRNIWEKNVKHIEEHNLRHDRGLVTYKLGLNQFTDLTFEEFKAK 63

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+ ++ S +   +    E N+   +P  +DWRE G++T   +Q  CG+C+AFS   
Sbjct: 64  YLMEMSLVSES-LSDGISYEAEGND---VPASVDWREYGYVTEVKDQGQCGSCWAFSAVG 119

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           AI+GQ  +        S QQ+VDC+   GN GC GG + N   Y++ + GL    DYPY+
Sbjct: 120 AIEGQYLRKFQNQTLFSEQQLVDCTRRFGNHGCGGGWMENAYKYLKNS-GLETASDYPYQ 178

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G +  C++++   V  ++    +   DE  L   +   GP AV+++A    F +Y SGI+
Sbjct: 179 GWEYQCQYRKELGVAKVTGAYTVHSGDEMKLMQMVGREGPAAVAVDAQS-DFYMYESGIF 237

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
             + CTS  V HA+L VGY   S    WILKN W   WG++GYM   R  NN C IA+ A
Sbjct: 238 QSQTCTSRSVTHAVLAVGYGTESGTDYWILKNSWGKWWGEDGYMRFARNRNNMCAIASVA 297

Query: 305 VYALI 309
              ++
Sbjct: 298 SVPMV 302


>gi|391333248|ref|XP_003741031.1| PREDICTED: uncharacterized protein LOC100898636 [Metaseiulus
           occidentalis]
          Length = 642

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 163/294 (55%), Gaps = 19/294 (6%)

Query: 25  ATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR 84
           A DS ++  ++ N   I+ HN         Y +  +  +D  P    +EM  +    I  
Sbjct: 353 AEDSMRRRIFEKNVAMINGHNLLHDLKRVSYRMGLSRFTDSTP----EEMRAMRCLNINV 408

Query: 85  TLVRSP------ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKS 138
           ++          ++ ES  + + +DWR++G++TP  NQ +CG+C+AFS   A++GQ FK+
Sbjct: 409 SMTTGGPHEEVFDAIESSDLSEAIDWRQQGYVTPVKNQGNCGSCWAFSATGAVEGQHFKA 468

Query: 139 TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFK 198
           T  +E LS Q +VDC  +  + GC GG       Y++  GG+  E+ YPY+     C+F+
Sbjct: 469 TGRLESLSEQNLVDC--VKESKGCDGGFFEQAFQYIKDNGGINTEDSYPYEAFDGSCRFR 526

Query: 199 RPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDY 258
             +I   +S +  +P   E  L+  ++T+GPI+V+I+ S  +FQ Y  G+Y + +C+S  
Sbjct: 527 EDSIGATVSGYQTIPKGSEADLQKAVSTIGPISVAIDVSNPSFQNYREGVYYEPSCSSSN 586

Query: 259 VNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKR--GNNRCGIANYAVY 306
           ++HA+L+VGY  +     W++KN W   +G+ GY+ + R  GNN CGIA+ A Y
Sbjct: 587 LDHAVLVVGYGSDGGEDYWLVKNSWGTSFGEQGYVRMARNKGNN-CGIASAAAY 639



 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 160/288 (55%), Gaps = 8/288 (2%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTL 86
           +S ++  ++ N   I+ HN         Y +  + L+D  P   ++ +  L  +   +T 
Sbjct: 35  ESMRRRIFEKNVAMINAHNLLHDLKQVSYRMGLSRLTDATPAE-VQALKCLNFTLPNKTS 93

Query: 87  VRSPESN-ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEEL 145
            +S     +   +P+ +DW ++G++TP  +Q  CGAC+ F+   AI+GQ FK+T  +  L
Sbjct: 94  RKSTLGTLQRQDLPEAVDWTQQGYVTPVKDQGKCGACWTFAATGAIEGQHFKATGNLVSL 153

Query: 146 SIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVD 205
           S Q ++DC   + + GC+GG      +Y++ +GG+  EE YPY+     C+F++ ++   
Sbjct: 154 SEQNILDCVKTATSNGCSGGLFVEAFDYLKNSGGIDAEESYPYEASGGTCRFRQDSVAAT 213

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
           +S +  +   +E  L+  +AT+GPI+V I++    FQ Y  GIY +  CT ++++HA+L+
Sbjct: 214 VSGYQAISAGNEAELQEAVATIGPISVGIDSGHPGFQHYTGGIYYEPECT-EHLSHAVLV 272

Query: 266 VGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           VGY T N    W++KN W   +G  GY+ + R  NN CGIA  A Y +
Sbjct: 273 VGYGTENGEDYWLVKNSWGASYGLQGYIKMARNRNNNCGIATGAAYPI 320


>gi|330803818|ref|XP_003289899.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
 gi|325080010|gb|EGC33584.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
          Length = 326

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 161/312 (51%), Gaps = 26/312 (8%)

Query: 11  IFPQKKYK-----------KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRE 59
           IF QK+Y+           K Y      S+  + +Q N   +   NQ+    + G  +  
Sbjct: 22  IFSQKQYQTAFQNWMVKHQKSYTNDEFGSRYSV-FQDNMDIVAKWNQKGSNTILGLNVMA 80

Query: 60  NHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDC 119
           +  ++   + Y+     +T+ +  +TLV          +P  +DWR  G +T   NQ  C
Sbjct: 81  DLTNEEFKKLYLGTKANVTYKK--KTLVGVSG------LPASVDWRANGAVTAVKNQGQC 132

Query: 120 GACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGG 179
           G CYAFS   +++G    ++ ++  LS QQ++DCS   GN GC GG + N+  Y+   GG
Sbjct: 133 GGCYAFSTTGSVEGIHEITSQQLVPLSEQQILDCSGSEGNNGCDGGLMTNSFEYIIAVGG 192

Query: 180 LMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
           L  E  YPY G+   CKF + NI   I+ +  +    E  L+  +A   P++V+I+AS  
Sbjct: 193 LDTEASYPYTGEVGKCKFNKKNIGATITGYKNVESGSESDLQTAVAAQ-PVSVAIDASQS 251

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG- 294
           +FQLYASG+Y +  C+S  ++H +L VGY   S    WI+KN W   WG+NG++ + R  
Sbjct: 252 SFQLYASGVYYEPECSSTQLDHGVLAVGYGSQSGQDYWIVKNSWGADWGENGFILMARNK 311

Query: 295 NNRCGIANYAVY 306
           +N CGIA  A +
Sbjct: 312 DNNCGIATMASF 323


>gi|211909242|gb|ACJ12894.1| cathepsin L1D [Fasciola hepatica]
          Length = 326

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 157/310 (50%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMPRASDILSHG--------IPYEANNRAVPDKIDWRESGYVTGVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN GC GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCGGGLMENAYEYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY+  +  C++ R   V  ++ +  L   +E  LK  + + GP AV+++     F +Y
Sbjct: 194 SYPYRAVEGQCRYNRQLGVAKVTGYYTLHSGNEAGLKSLVGSEGPAAVAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
            SGIY  + C+   +NHA+L VGY        WI+KN W   WG+ GY+ + R   N CG
Sbjct: 253 RSGIYQSQTCSPLGLNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASLPMV 322


>gi|195729975|gb|ACG50798.1| cathepsin L1 [Fascioloides magna]
          Length = 327

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 157/305 (51%), Gaps = 15/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++KY K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRKYNKEY-NGADDEHRRNIWEQNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ E++  +       +    + N+   +P+ +DWR+ G++T   +Q  CG+C+AFS   
Sbjct: 84  YLFEISPKSELLSHSGISYQAKGND---VPESIDWRDYGYVTEVKDQGQCGSCWAFSSTG 140

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ  K        S QQ+VDC+   GN GC GG +     Y++   GL  E  YPY+
Sbjct: 141 AMEGQYIKKFRTTVSFSEQQLVDCTRNYGNSGCNGGWMERAFEYLR-RNGLETESSYPYR 199

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
                C+++    V  ++ +      +E +L   +   GP+AV+++     F +Y SGIY
Sbjct: 200 AVDDHCRYESQLGVAKVTGYYTEHSGNEVSLMNMVGGEGPVAVAVDVQS-DFSMYKSGIY 258

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
             E C++ YVNHA+L VGY   S    WILKN W   WGD GY+   R  NN CGIA+YA
Sbjct: 259 QSETCSTYYVNHAVLAVGYGTESGTDYWILKNSWGSWWGDQGYIRFARNRNNMCGIASYA 318

Query: 305 VYALI 309
              ++
Sbjct: 319 SVPMV 323


>gi|21263041|gb|AAM44832.1|AF510856_1 cathepsin L2 [Fasciola gigantica]
          Length = 326

 Score =  177 bits (450), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 156/310 (50%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGADDEHRRNIWEENVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMPRASDILSHG--------IPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN+GC GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNMGCMGGLMENAYEYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++ R   V  ++ +  +    E  LK  +   GP AV+++     F +Y
Sbjct: 194 SYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELKNLVGAEGPAAVAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
           + GIY    C+S +VNHA+L VGY        WI+KN W   WG+ GY+ + R   N CG
Sbjct: 253 SGGIYQSRTCSSLHVNHAVLAVGYGTQGGTDYWIVKNSWGSSWGERGYIRMVRNRGNMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASLPMV 322


>gi|2804264|dbj|BAA24443.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  177 bits (450), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 165/301 (54%), Gaps = 16/301 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           ++ K+Y  +  +  +   +  N  K+  H++   QG   + L  N  +D+    ++  + 
Sbjct: 33  QHSKNYDSETEERFRMKIFMENAHKVAKHSKLFSQGFVKFKLGLNKYADMLHHEFVSTLN 92

Query: 76  RLTHSRIRRTLVRSPESNESVL--------IPDHLDWREKGFITPDWNQEDCGACYAFSI 127
               ++ +  +++  + N++V         +PD +DWR+KG +T   +Q  CG+C++FS 
Sbjct: 93  GF--NKTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTKVKDQGHCGSCWSFSG 150

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
           + +++GQ F+ T ++  LS Q +VDCS   GN GC GG + N   Y++  GG+  E+ YP
Sbjct: 151 SGSLEGQHFRKTGKLVSLSEQNLVDCSGRYGNNGCNGGLMDNAFRYIKDNGGIDTEQSYP 210

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y  +   C +K  N       +  +   +E  LK  +ATVGPI+++I+AS  TFQLY+ G
Sbjct: 211 YLAEDEKCHYKTQNSGATDKGFVDIEEGNEDDLKAAVATVGPISIAIDASYETFQLYSDG 270

Query: 248 IYDDEACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           +Y D  C S  ++H +L+VGY      ++ W++KN W    G NGY+ + R  +N CG+A
Sbjct: 271 VYSDPECISQELDHGVLVVGYGTSDDGQDYWLVKNSWRPSCGLNGYIKMARNQDNMCGVA 330

Query: 302 N 302
           +
Sbjct: 331 S 331


>gi|333830589|gb|AEG20937.1| ctsk [Danio rerio]
          Length = 284

 Score =  177 bits (450), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 140/276 (50%), Gaps = 7/276 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +K++Y     +S ++  W+ N      HN+E + G+H Y L  NH  D+      +++  
Sbjct: 11  HKREYNGLNEESIRRTIWEKNMLFFEAHNKEYELGIHTYDLGMNHFGDMTLEEVAEKVMG 70

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L     R         +    +P  +D+R+ G++T   NQ  CG+C+AFS   A++GQ+ 
Sbjct: 71  LQMPMYRDPANTFVPDDRVGKLPKSIDYRKLGYVTSVKNQGSCGSCWAFSSVGALEGQLM 130

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K+  ++ +LS Q +VDC  ++ N GC GG + N   YV    G+  EE YPY G    C 
Sbjct: 131 KTKGQLVDLSPQNLVDC--VTENDGCGGGYMTNAFRYVSNNQGIDSEESYPYVGTDQQCA 188

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +    +      +  +P  +E AL   +A VGP++V I+A   TF  Y SG+Y D  C  
Sbjct: 189 YNTSGVAASCRGYKEIPQGNERALTAAVANVGPVSVGIDAMQSTFLYYKSGVYYDPNCNK 248

Query: 257 DYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNG 287
           + VNHA+L VGY      +  WI+KN W   WG  G
Sbjct: 249 EDVNHAVLAVGYGATPRGKKYWIVKNSWGEEWGKKG 284


>gi|146386358|gb|ABQ23967.1| cathepsin L [Oryctolagus cuniculus]
          Length = 246

 Score =  177 bits (450), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 95/238 (39%), Positives = 135/238 (56%), Gaps = 9/238 (3%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVRSPES 92
           W+ N + I  HN E  QG HG+T+    L  +    + + M    + + ++  + R P  
Sbjct: 13  WEKNMRMIELHNGEYSQGKHGFTMGSERLRHMTNEEFRQVMNGFQNQKHKKGKMFRDP-- 70

Query: 93  NESVLI--PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQV 150
              +L+  P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q +
Sbjct: 71  ---LLLQYPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFQKTGKLISLSEQNL 127

Query: 151 VDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWS 210
           VDCS   GN GC GG +     YV+   GL  EE YPY+G    CK+K P   V   +  
Sbjct: 128 VDCSHPQGNQGCNGGLMDYAFQYVKDNSGLDSEESYPYEGMDGTCKYK-PECSVANDTGF 186

Query: 211 VLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           V  P  E AL   LATVGPI+ +I+A   +FQ Y SGIY D  C+S  ++H +L+VGY
Sbjct: 187 VDIPGHEKALLRALATVGPISAAIDAGHMSFQFYKSGIYYDPDCSSKDLDHGVLVVGY 244


>gi|211909240|gb|ACJ12893.1| cathepsin L1D [Fasciola hepatica]
          Length = 326

 Score =  177 bits (450), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/306 (35%), Positives = 158/306 (51%), Gaps = 18/306 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGADDEHRRNIWEENVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ E+ R   S I    +    SN +V  PD +DWRE G++T   +Q +CG+C+AFS   
Sbjct: 84  YLTEIPRA--SDILSHGIPYEASNRAV--PDKIDWRESGYVTGVKDQGNCGSCWAFSTTG 139

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPY 188
            ++GQ  K+       S QQ+VDCS   GN GC GG + N   Y+ QF  GL  E  YPY
Sbjct: 140 TMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCGGGLMENAYEYLKQF--GLETESSYPY 197

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +  +  C++ R   V  ++ +  L   +E  LK  + + GP AV+++     F +Y SGI
Sbjct: 198 RAVEGQCRYNRQLGVAKVTGYYTLHSGNEAGLKSLVGSEGPAAVAVDVESD-FMMYRSGI 256

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           Y  + C+   +NHA+L VGY        WI+KN W   WG+ GY+ + R   N CGIA+ 
Sbjct: 257 YQSQTCSPLGLNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASL 316

Query: 304 AVYALI 309
           A   ++
Sbjct: 317 ASLPMV 322


>gi|60649669|gb|AAH90560.1| LOC594890 protein, partial [Xenopus (Silurana) tropicalis]
          Length = 355

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 162/302 (53%), Gaps = 10/302 (3%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI-KE 73
           + +KK Y+ +  +  ++L W+   K I  HN E   GLH Y +  NHL D+       K+
Sbjct: 57  QTHKKIYKNEGEELARRLIWEDTLKFIMLHNLEYSMGLHTYEVGMNHLGDMVAEEMTDKQ 116

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           M  +       T V    S  S   P+ +DWR K  +T   +Q  C A +AFS   A++ 
Sbjct: 117 MNFIPQVIANITDVPVEISKSSP--PESIDWRNKNCVTSVKDQGSCIASWAFSSIGALEC 174

Query: 134 QIFKS-TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           Q  K  T ++E LS+Q ++DCS   GN GC GG + ++  Y+    G+  E +YPY+GK 
Sbjct: 175 QNMKRRTGKLESLSVQNLLDCSQTYGNNGCKGGWVVSSFRYI-IDNGIELESNYPYQGKD 233

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C +         +S+  LP  DE  LK  +  +GP++V+I+AS  TF++Y +G+Y D 
Sbjct: 234 GKCSYTPVKKASVCTSYRQLPYGDEATLKQVVGLMGPVSVAIDASRKTFRMYKNGVYYDP 293

Query: 253 ACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            C+S   +H++L+VGY        W++KN W   +GD GY+ + R  +N CGIAN+  + 
Sbjct: 294 NCSSSTPDHSVLVVGYGAEDGVEYWLVKNSWGTSFGDEGYIKMARNHHNNCGIANFGCFP 353

Query: 308 LI 309
           ++
Sbjct: 354 VV 355


>gi|358334193|dbj|GAA43174.2| cysteine proteinase 3, partial [Clonorchis sinensis]
          Length = 374

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 163/316 (51%), Gaps = 30/316 (9%)

Query: 15  KKYKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHP--- 67
           +K++ ++ +K TDS+++++    +  +  ++  HN+  ++G   +    N  SD  P   
Sbjct: 68  EKFRVEFNRKYTDSQEQINRLNVFCQSFMRVREHNKAYEEGRVTFKRGINEFSDRFPDER 127

Query: 68  RHYIK---EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYA 124
           +H       +++ + S  R+    +P+S         +DWR  G +TP   Q DCGAC+A
Sbjct: 128 QHACGGRINISKHSGSTFRKVAAPAPQS---------IDWRRNGAVTPVRRQGDCGACWA 178

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           F+   AI+G+ F     +E  S QQ+VDC       GC GG       YV+  GGL  E 
Sbjct: 179 FAATGAIEGRYFIFEKRLETFSPQQLVDCIQGDTTNGCNGGYPSEAFEYVENVGGLELER 238

Query: 185 DYPYKGKQS-----ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
           DYPY    +      C + +    V ++S  +LP  DE AL   ++  GPIA+  +AS  
Sbjct: 239 DYPYVSVATGLPNPFCGYDQTKQQVKLTSHVILPSGDEEALLQAVSIYGPIAILFDASHP 298

Query: 240 TFQLYASGIYDDEAC--TSDYVNHAMLLVGYTRN----SWILKNWWSHHWGDNGYMYLKR 293
           +F+ Y S IY +E C  T D V HAML+VGY        W++KN W   WG+ GYM ++R
Sbjct: 299 SFKDYESDIYSEENCGTTLDDVTHAMLVVGYGEELGEPYWLVKNSWGDKWGEKGYMRVRR 358

Query: 294 GNNRCGIANYAVYALI 309
           G N C +A ++ Y L+
Sbjct: 359 GVNMCAVAGFSSYPLM 374


>gi|74152091|dbj|BAE32077.1| unnamed protein product [Mus musculus]
          Length = 245

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/247 (40%), Positives = 139/247 (56%), Gaps = 14/247 (5%)

Query: 74  MTRLTHSRIRR----TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           + R+   RI R    T+     SN +  +PD +DWREKG +T    Q  CGAC+AFS   
Sbjct: 2   LCRMGALRIPRQSPKTVTFRSYSNRT--LPDTVDWREKGCVTEVKYQGSCGACWAFSAVG 59

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
           A++GQ+   T ++  LS Q +VDCS     GN GC GG +     Y+   GG+  +  YP
Sbjct: 60  ALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYP 119

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           YK     C +   N     S +  LP  DE ALK  +AT GP++V I+AS  +F  Y SG
Sbjct: 120 YKATDEKCHYNSKNRAATCSGYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSG 179

Query: 248 IYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIAN 302
           +YDD +CT + VNH +L+VGY     ++ W++KN W  ++GD GY+ + R N N CGIA+
Sbjct: 180 VYDDPSCTGN-VNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIAS 238

Query: 303 YAVYALI 309
           Y  Y  I
Sbjct: 239 YCSYPEI 245


>gi|4574304|gb|AAD23996.1|AF112566_1 cathepsin [Fasciola gigantica]
          Length = 326

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 156/310 (50%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGADDEHRRNIWEENVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMPRASDILSHG--------IPYEANNRAVPDKIDWRESGYVTELKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN+GC+GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNMGCSGGLMENAYEYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++ R   V  ++ +  +    E  LK  +   GP AV+++     F +Y
Sbjct: 194 SYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELKNLVGAEGPAAVAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
           + GIY    C+S  VNHA+L VGY        WI+KN W   WG+ GY+ + R   N CG
Sbjct: 253 SGGIYQSRTCSSLRVNHAVLAVGYGTQGGTDYWIVKNSWGSSWGERGYIRMVRNRGNMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASLPMV 322


>gi|313754424|pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible
           Inhibition Of Human Cathepsin L By Their Respective
           Dipeptidyl Glyoxal And Diazomethylketone Inhibitors
 gi|313754425|pdb|3OF9|A Chain A, Structural Basis For Irreversible Inhibition Of Human
           Cathepsin L By A Diazomethylketone Inhibitor
          Length = 221

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 92/220 (41%), Positives = 129/220 (58%), Gaps = 10/220 (4%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q +VDCS   G
Sbjct: 3   PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG 62

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG +     YVQ  GGL  EE YPY+  +  CK+     V + + +  +P Q E 
Sbjct: 63  NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQ-EK 121

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS------ 272
           AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY   S      
Sbjct: 122 ALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNN 181

Query: 273 --WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
             W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 182 KYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 221


>gi|15593249|gb|AAL02221.1|AF410881_1 cysteine protease CP10 precursor [Frankliniella occidentalis]
          Length = 334

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 7/300 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           + K Y     ++ +   ++ N  +I  HN     G   + +  +  +D+H     +++  
Sbjct: 35  HAKTYANTVEEAYRAKVFKENAIRIAKHNDLFASGEVTFKVGYSQYADMHTHEVTEKLNG 94

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
                 + +      SN+S      +DWR KG +TP  +Q  CG+C++FS   +++GQ+F
Sbjct: 95  YRSGLKQASAFVHTASNDSWPWSKKVDWRSKGAVTPIKDQGQCGSCWSFSATGSLEGQLF 154

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSIC 195
                +  LS Q +VDCS   GN GC GG + +   YV+  GG+  EE YPY       C
Sbjct: 155 LKNKNLVSLSEQNLVDCSWDFGNEGCNGGLMDSAFEYVESNGGIDTEESYPYTAVDGDSC 214

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
            +K  N     + +  +  + E AL+  +   GP++V+I+AS  +FQ+Y+SGIY + AC+
Sbjct: 215 LYKAANNAGVNTGYKDVQAKSESALRDAVEKAGPVSVAIDASNWSFQMYSSGIYYESACS 274

Query: 256 SDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           SDY++H +L VGY      +  WI+KN W   WG+ GY+ + R   N CGIA  A Y L+
Sbjct: 275 SDYLDHGVLAVGYGSEWPNKEFWIVKNSWGTSWGEEGYIKMARNKKNNCGIATEASYPLV 334


>gi|405977172|gb|EKC41635.1| Cathepsin L [Crassostrea gigas]
          Length = 224

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 136/225 (60%), Gaps = 9/225 (4%)

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
           P SN  + +P+ ++W ++G++TP  +Q  C +C+AF+    ++GQ F+ T ++  LS Q 
Sbjct: 4   PPSN--LRLPNAVNWTKEGYVTPVKDQGFCLSCWAFAATGGLEGQHFRKTKKLVRLSEQN 61

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW 209
           +VDCS    NLGC  G+  N LNY+   GGL KE  YPY GK   C+F+   +  +    
Sbjct: 62  LVDCS--KENLGCTAGTPENALNYIARNGGLDKEVSYPYVGKNGRCRFRPTEVGANCQGI 119

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY- 268
             +P  DE +L+  + ++GPI VS++AS  +F+ Y +G+YDD+AC+   + H  L+VGY 
Sbjct: 120 VHVPAGDELSLQKAVGSIGPIVVSLDASKRSFKQYRNGVYDDKACSKKLITHYALIVGYG 179

Query: 269 ---TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               +  W++KN W   WG +GYM L R  +N CGIAN A+Y  +
Sbjct: 180 EFQNKKYWLIKNSWGTSWGMDGYMMLARNQDNICGIANQAIYPSV 224


>gi|333830587|gb|AEG20936.1| ctsk [Danio rerio]
          Length = 284

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 141/276 (51%), Gaps = 7/276 (2%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +K++Y     +S ++  W+ N   I  HN+E + G+H Y L  NH  D+      +++  
Sbjct: 11  HKREYNGLNEESIRRTIWEKNMLFIEAHNKEYELGIHTYDLGMNHFGDMTLEEVAEKVMG 70

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
           L     R         +    +P  +D+R+ G++T   NQ  CG+C+AFS   A++GQ+ 
Sbjct: 71  LQMPMYRDPANTFVPDDRVGKLPKSIDYRKLGYVTSVKNQGSCGSCWAFSSVGALEGQLM 130

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
           K+  ++ +LS Q +VDC  ++ + GC GG + N   YV    G+  EE YPY G    C 
Sbjct: 131 KTKGQLVDLSPQNLVDC--VTEDDGCGGGYMTNAFRYVSNNQGIDSEESYPYVGTDQQCA 188

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256
           +    +      +  +P  +E AL   +A VGP++V I+A   TF  Y SG+Y D  C  
Sbjct: 189 YNTSGVAASCRGYKEIPQGNERALTAAVANVGPVSVGIDAMQSTFLYYKSGVYYDPNCNK 248

Query: 257 DYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNG 287
           + VNHA+L VGY      +  WI+KN W   WG  G
Sbjct: 249 EDVNHAVLAVGYGATPRGKKYWIVKNSWGEEWGKKG 284


>gi|20136379|gb|AAM11647.1|AF490984_1 cathepsin L, partial [Fasciola hepatica]
          Length = 311

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 159/306 (51%), Gaps = 18/306 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 10  KRMYNKEY-NGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 68

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+R   S I    V    +N +V  PD +DWRE G++T   +Q +CG+C+AFS   
Sbjct: 69  YLTEMSRA--SDILSHGVPYEANNRAV--PDKIDWRESGYVTEVKDQGNCGSCWAFSTTG 124

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPY 188
            ++GQ  K+       S QQ+VDCS   GN GC+GG + N   Y+ QF  GL  E  YPY
Sbjct: 125 TMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQF--GLETESSYPY 182

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
              +  C++ +   V  ++ +  +    E  LK  +   GP AV+++     F +Y SGI
Sbjct: 183 TAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGAEGPAAVAVDVESD-FMMYRSGI 241

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           Y  + C+   VNHA+L VGY        WI+KN W  +WG+ GY+ + R   N CGIA+ 
Sbjct: 242 YQSQTCSPLRVNHAVLAVGYGTQDGTDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASL 301

Query: 304 AVYALI 309
           A  A++
Sbjct: 302 ASVAMV 307


>gi|261824899|pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824900|pdb|3H89|B Chain B, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824901|pdb|3H89|C Chain C, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824902|pdb|3H89|D Chain D, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824903|pdb|3H89|E Chain E, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824904|pdb|3H89|F Chain F, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824905|pdb|3H8B|A Chain A, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824906|pdb|3H8B|B Chain B, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824907|pdb|3H8B|C Chain C, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824908|pdb|3H8B|D Chain D, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824909|pdb|3H8B|E Chain E, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824910|pdb|3H8B|F Chain F, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|317455049|pdb|2XU3|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|317455050|pdb|2XU4|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|317455051|pdb|2XU5|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009432|pdb|2YJ2|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009433|pdb|2YJ8|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009434|pdb|2YJ9|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009435|pdb|2YJB|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009436|pdb|2YJC|A Chain A, Cathepsin L With A Nitrile Inhibitor
          Length = 220

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 92/220 (41%), Positives = 129/220 (58%), Gaps = 10/220 (4%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q +VDCS   G
Sbjct: 2   PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG 61

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG +     YVQ  GGL  EE YPY+  +  CK+     V + + +  +P Q E 
Sbjct: 62  NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQ-EK 120

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS------ 272
           AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY   S      
Sbjct: 121 ALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNN 180

Query: 273 --WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
             W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 181 KYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220


>gi|390355503|ref|XP_001200245.2| PREDICTED: counting factor associated protein D-like
           [Strongylocentrotus purpuratus]
          Length = 509

 Score =  177 bits (449), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 154/292 (52%), Gaps = 12/292 (4%)

Query: 23  KKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRI 82
           K  +  ++K H+  N + IH+ N+       GY L  NH++D   +   +   RL  +R 
Sbjct: 216 KSESHVQRKGHFTKNVRMIHSINRANL----GYVLDINHMADQSHQELKRMRGRLRQTRP 271

Query: 83  RRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
              L           +PDH+DW   G ++P  +Q  CG+C++F  A  I+G +F  + + 
Sbjct: 272 NNGLPYDGSDVSDDAVPDHIDWNVLGAVSPVKDQAVCGSCWSFGSAETIEGAVFMQSGKR 331

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-PYKGKQSICKFKRPN 201
             LS Q ++DC+  +GN GC GG       ++   GG+  EE Y PY G+  +C + +  
Sbjct: 332 VRLSQQMLMDCTWAAGNNGCDGGEEWRVYEWLMKNGGIPLEETYGPYLGQNGMCHYDKSK 391

Query: 202 IVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC--TSDYV 259
            V  I  +  +   ++  LK  LAT GPIAV I+A+  +F  Y+ G Y D +C  T D +
Sbjct: 392 AVASIKKYYNVTSGNQKDLKKALATKGPIAVGIDAAVPSFSFYSYGTYYDASCGNTVDDL 451

Query: 260 NHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306
           +HA+L VGY  +S     W++KN WS HWG+NGY+ +   +N CG+A  A Y
Sbjct: 452 DHAVLAVGYGTDSSGQDYWLIKNSWSTHWGNNGYVAISMKDNNCGVATAATY 503


>gi|340370382|ref|XP_003383725.1| PREDICTED: silicatein-like [Amphimedon queenslandica]
          Length = 369

 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 155/315 (49%), Gaps = 24/315 (7%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y     + +K + W SN   I  HN  A +   GYTL  N   DL    Y   
Sbjct: 54  KAKHTKSYESDIHELEKYVTWVSNSALIDAHN--ALRSSFGYTLAMNQFGDLTSSDYYYG 111

Query: 74  MTRLTH-----------------SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQ 116
              L                   +     L   P+   S  +P  +DWR  G +    +Q
Sbjct: 112 TKCLYQYNYGGSQNSSATEADQDNLFNMKLFEWPKGLSSSSLPSEVDWRTMGAVGDVKDQ 171

Query: 117 EDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQF 176
             C +CYAFS+  AI+G    ++ +   LS Q ++DCS+I GN+GC+GGS   +  YV  
Sbjct: 172 GRCKSCYAFSVTGAIEGMEALASGKFVSLSEQNIIDCSVIYGNMGCSGGSREISFLYVID 231

Query: 177 AGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINA 236
             G+  E+ YPY   Q +C FK   I    +    +  + E  L   +A  GP+ V ++ 
Sbjct: 232 KNGINTEQSYPYIESQYLCYFKESAIGGRATGMVRIASKSETDLMAAVAISGPVTVGVDH 291

Query: 237 SPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLK 292
              +FQ Y+SGI+D+ +C+S  + HAM++VGY     ++ W++KN W  +WG +GY+ + 
Sbjct: 292 MHSSFQFYSSGIFDEPSCSSTSLTHAMVIVGYGSYNGKDYWLVKNSWGANWGMSGYIMMV 351

Query: 293 RGN-NRCGIANYAVY 306
           RG  N+CGIA  A+Y
Sbjct: 352 RGKYNQCGIATRAIY 366


>gi|241913450|pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|241913451|pdb|3HHA|B Chain B, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|241913452|pdb|3HHA|C Chain C, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|241913453|pdb|3HHA|D Chain D, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|317455045|pdb|2XU1|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|317455046|pdb|2XU1|B Chain B, Cathepsin L With A Nitrile Inhibitor
 gi|317455047|pdb|2XU1|C Chain C, Cathepsin L With A Nitrile Inhibitor
 gi|317455048|pdb|2XU1|D Chain D, Cathepsin L With A Nitrile Inhibitor
          Length = 220

 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 92/220 (41%), Positives = 129/220 (58%), Gaps = 10/220 (4%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F+ T  +  LS Q +VDCS   G
Sbjct: 2   PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG 61

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG +     YVQ  GGL  EE YPY+  +  CK+     V + + +  +P Q E 
Sbjct: 62  NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPKQ-EK 120

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS------ 272
           AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY   S      
Sbjct: 121 ALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNN 180

Query: 273 --WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
             W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 181 KYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220


>gi|126294322|ref|XP_001373208.1| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 329

 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 169/303 (55%), Gaps = 19/303 (6%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           Y K+Y +K  +S ++  W+ N K I+ HN+  ++G   Y L  N   D+     ++ ++ 
Sbjct: 36  YGKNYSEKE-ESFRRGVWEKNLKFINDHNRLHKEGKITYYLGMNAFGDMTINETVRMLSI 94

Query: 77  LTH-SRIRR-TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            T  +RIRR T +++    +   +P  +DWRE GF+TP   Q  C +C+AFS   +++GQ
Sbjct: 95  ATAPARIRRDTKLKTSTFPD---LPTSVDWREHGFMTPVRAQWTCASCWAFSAVGSLEGQ 151

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
           +F+ + +  E+S Q ++DC        C GGS+     Y++   G++ E+ YPYK K++ 
Sbjct: 152 LFRKSGKPLEMSKQMLIDC---DRRQSCRGGSVILAFKYMK-KKGIVSEQCYPYKDKKNQ 207

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
               +   V  I  + VLP  +E AL   +A VGP++V+++A   +F  Y  G+Y +  C
Sbjct: 208 SCLNKTCPVTQIKKYVVLPSGNEQALMRAVANVGPVSVTVHAI-RSFFYYRGGVYTEPKC 266

Query: 255 TSDYVNHAMLLVGY-------TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAVY 306
              Y+NH++L+VGY        +  WILKN W   WG+ GYM + K  NN+CGIA  AVY
Sbjct: 267 KKKYINHSVLVVGYGYEKEKENKKYWILKNSWGARWGEKGYMRFQKDNNNQCGIATMAVY 326

Query: 307 ALI 309
            ++
Sbjct: 327 PVL 329


>gi|7271891|gb|AAF44676.1|AF239265_1 cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  177 bits (448), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 159/302 (52%), Gaps = 10/302 (3%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY-IK 72
           ++ Y K+Y     D ++ + W+ N K I  HN     GL  YTL  N  +D+    +  K
Sbjct: 25  KRIYNKEYNGADDDHRRNI-WEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
            +T + H     +     E+N+   +P  +DWRE G++T   +Q  CG+C+AFS   A++
Sbjct: 84  YLTEMPHRSDILSHGIPYEANKRA-VPASIDWRESGYVTEVKDQGQCGSCWAFSTTGAME 142

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ  K+       S QQ+VDCS   GN GC GG + N   Y++   GL  E  YPY+  +
Sbjct: 143 GQYMKNQRTSISFSEQQLVDCSDDFGNFGCNGGLMENACEYLKRF-GLETESSYPYRAVE 201

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C++ +   V  ++ + ++   DE  L+  +   GP AV+++     F +Y SGIY  +
Sbjct: 202 GPCRYNKQLGVAKVTGYYMVHSGDEVELQNLVGIEGPAAVALDVDSD-FMMYRSGIYQSQ 260

Query: 253 ACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            C+ +++NH +L VGY   S    WI+KN W   WG+NGY+ + R   N CGIA+ A   
Sbjct: 261 TCSPEFLNHGVLAVGYGTQSGTDYWIVKNSWGPWWGENGYIRMVRNRGNMCGIASLASVP 320

Query: 308 LI 309
           ++
Sbjct: 321 MV 322


>gi|350606375|ref|NP_001076821.2| uncharacterized protein LOC594890 precursor [Xenopus (Silurana)
           tropicalis]
          Length = 333

 Score =  177 bits (448), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 163/304 (53%), Gaps = 14/304 (4%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           + +KK Y+ +  +  ++L W+   K I  HN E   GLH Y +  NHL D+      +EM
Sbjct: 35  QTHKKIYKNEGEELARRLIWEDTLKFIMLHNLEYSMGLHTYEVGMNHLGDM----VAEEM 90

Query: 75  TRLTHSRIRRTLVR---SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           T    + I + +      P        P+ +DWR K  +T   +Q  C A +AFS   A+
Sbjct: 91  TDKQMNFIPQVIANITDVPVEISKSSPPESIDWRNKNCVTSVKDQGSCIASWAFSSIGAL 150

Query: 132 QGQIFKS-TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           + Q  K  T ++E LS+Q ++DCS   GN GC GG + ++  Y+    G+  E +YPY+G
Sbjct: 151 ECQNMKRRTGKLESLSVQNLLDCSQTYGNNGCKGGWVVSSFRYI-IDNGIELESNYPYQG 209

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           K   C +         +S+  LP  DE  LK  +  +GP++V+I+AS  TF++Y +G+Y 
Sbjct: 210 KDGKCSYTPVKKASVCTSYRQLPYGDEATLKQVVGLMGPVSVAIDASRKTFRMYKNGVYY 269

Query: 251 DEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D  C+S   +H++L+VGY        W++KN W   +GD GY+ + R  +N CGIAN+  
Sbjct: 270 DPNCSSSTPDHSVLVVGYGAEDGVEYWLVKNSWGTSFGDEGYIKMARNHHNNCGIANFGC 329

Query: 306 YALI 309
           + ++
Sbjct: 330 FPVV 333


>gi|332030000|gb|EGI69825.1| Cathepsin L [Acromyrmex echinatior]
          Length = 328

 Score =  177 bits (448), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 168/312 (53%), Gaps = 10/312 (3%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + + EW   FIF +  +KK Y+    +  +   +  N +KI  HN++ +     Y L  N
Sbjct: 24  ILDAEW---FIF-KTHHKKIYKSSVEEGYRMKIFLDNKRKIAEHNRKYELNEVPYKLGMN 79

Query: 61  HLSDLHPRHYIKEMTRLTHSRI--RRTLVRSPESNESVLIPDHLDWREKGFITPDWNQED 118
              D+    ++  +     S    ++ +  +  S  +V +P  +DWR+ G +T   +Q  
Sbjct: 80  KYGDMLHHEFVNTLNGFNKSEKAQKQFMGATFISPANVELPKEVDWRKHGAVTEVKDQGH 139

Query: 119 CGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAG 178
           CG+C+AFS   +++GQ F+ T  +  LS Q ++DCS   GN GC GG + N   YV+   
Sbjct: 140 CGSCWAFSTTGSLEGQHFRQTGILVSLSEQNLIDCSGNYGNEGCNGGLMDNAFKYVRDNK 199

Query: 179 GLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASP 238
           GL  E+ YPY+ +   C++   N     + +  +P  +EH LK  +AT+GP++V+I+AS 
Sbjct: 200 GLDTEKSYPYEAENDKCRYNPRNSGAIDTGFVDIPRGNEHKLKAAVATIGPVSVAIDASH 259

Query: 239 HTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRG-NNR 297
            +FQLY+ G+Y D  C SD ++H +L+VGY  +S    ++W    G   Y+ + R  +N 
Sbjct: 260 ESFQLYSEGVYFDPECDSDNLDHGVLIVGYGTDSKTGHDYW---LGKKSYIKMARNKDNH 316

Query: 298 CGIANYAVYALI 309
           CGIA+ A Y L+
Sbjct: 317 CGIASSASYPLV 328


>gi|310975575|gb|ADP55136.1| truncated cathepsin L-like protein [Miichthys miiuy]
          Length = 246

 Score =  177 bits (448), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 138/244 (56%), Gaps = 13/244 (5%)

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           R    + + +L   P   E+   P  +DWR+ G++TP  +Q  CG+C+AFS   A++GQ 
Sbjct: 6   RKAERKFKGSLFMEPNFLEA---PRAVDWRDNGYVTPVKDQGQCGSCWAFSTTGALEGQH 62

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK-QSI 194
           F+ T ++  LS Q +VDCS   GN GC GG +     YV+   GL  E+ YPY G     
Sbjct: 63  FRKTGKLVSLSEQNLVDCSRPEGNEGCNGGLMDQAFQYVKDNQGLDSEDAYPYLGTGDQP 122

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C +       + + +  +P   EHAL   +A VGP++V+I+AS  +FQ Y SGIY ++ C
Sbjct: 123 CHYDPNYNSANDTGFIDVPSGKEHALMKAVAAVGPVSVAIDASHESFQFYQSGIYYEKDC 182

Query: 255 TSDYVNHAMLLVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAV 305
           +S+ ++H +L+VGY         +  WI+KN WS  WGD GY+Y+ K   N CGIA  A 
Sbjct: 183 SSEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRKNHCGIATAAS 242

Query: 306 YALI 309
           Y L+
Sbjct: 243 YPLV 246


>gi|358255491|dbj|GAA57187.1| cathepsin L [Clonorchis sinensis]
          Length = 368

 Score =  177 bits (448), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 164/303 (54%), Gaps = 28/303 (9%)

Query: 25  ATDSKKKLH-WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPR--------HYIKEMT 75
           A +S K+L+ +  N   +  HN   ++G   + L  N  +D  P+        H    ++
Sbjct: 76  AEESSKRLNVFCENFLYVRRHNNAYEEGTESFKLGINQFADRLPKERENICGGHIPANLS 135

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
               +R R+     P+S         +DWR+KG +T    Q  CG+C+AF+ A+A++G  
Sbjct: 136 SHGGARFRKIAAPPPKS---------IDWRKKGAVTSIRKQGRCGSCWAFAAAAAVEGHT 186

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI- 194
           +   +++E LS QQ++DCS+  GN GC GG    +  Y++ +GGL ++ DYPY   ++I 
Sbjct: 187 YIHNNQLETLSTQQLIDCSLEYGNGGCTGGDSVTSFKYLKESGGLERDRDYPYVSDKTIR 246

Query: 195 ----CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               CKF       +++ + VLP  DE A+   +   GP+A+S+++   +F+ Y   IY 
Sbjct: 247 PNPECKFDWTKCAAEVTGFVVLPYHDEDAILQAVGFYGPVAISVDSRLQSFKDYKGDIYS 306

Query: 251 DEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306
           D  C  +  +H+M++VGY   +    WI+KN W  HWG+ GY+ L+RG N CG+A+ + Y
Sbjct: 307 DPLCGKN-SDHSMVVVGYGEENGTPYWIIKNSWGEHWGEKGYLRLRRGVNMCGVASVSTY 365

Query: 307 ALI 309
            L+
Sbjct: 366 PLV 368


>gi|195455845|ref|XP_002074891.1| GK22909 [Drosophila willistoni]
 gi|194170976|gb|EDW85877.1| GK22909 [Drosophila willistoni]
          Length = 370

 Score =  177 bits (448), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 149/279 (53%), Gaps = 11/279 (3%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL--- 97
           +   N+   +G   Y L  N  +DL    ++ ++T    S    + V +   +  V    
Sbjct: 93  VDAGNEAFSKGTSTYKLAVNAFADLTNAEFLSQLTGRRKSNQGESKVAASRQSAHVQPGG 152

Query: 98  -IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSII 156
            +PD  DWR++G +T    Q  CG+C+AF+   AI+G +F+ T ++  LS Q +VDC  +
Sbjct: 153 NVPDAFDWRQQGGVTSVKYQGTCGSCWAFATTGAIEGHVFRKTGKLPNLSEQNLVDCGSL 212

Query: 157 SGNL-GCAGGSLRNTLNYV-QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPP 214
              L GC GG     + ++ +   G+ K + YPY   +  CK+        I+ ++ +PP
Sbjct: 213 DFGLNGCDGGYQEYAMAFINEKQRGISKSDQYPYIDNKETCKYTNSLSGAQITGFASIPP 272

Query: 215 QDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TR 270
           +DE  +K  +AT+GP+A S+N    +  LY SGIY DE C  D  NH++L+VGY     +
Sbjct: 273 KDEALMKKVIATLGPLACSLNGL-ESLLLYKSGIYADEKCNDDEPNHSVLVVGYGSEKGQ 331

Query: 271 NSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           + WI+KN W  +WG++GY  L RG N CGIA    Y ++
Sbjct: 332 DYWIIKNSWDKNWGEDGYFRLPRGKNFCGIALECSYPIV 370


>gi|332374900|gb|AEE62591.1| unknown [Dendroctonus ponderosae]
          Length = 359

 Score =  177 bits (448), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 159/305 (52%), Gaps = 18/305 (5%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F+  Q+KY K Y+  +  S ++  ++ N  KI  HN++ QQ L  Y L  N  SDL    
Sbjct: 24  FVTFQQKYGKVYQNDSELSVREEIFKENLAKIEEHNKQFQQNLVSYELGLNQFSDLTEAE 83

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVL----IPDHLDWREKGFITPDWNQEDCGACYAF 125
           +      LT S +   L +  E   S       P  ++W EKG +TP  NQ +CG+C+ F
Sbjct: 84  F---QALLTMSPLTDQLTKQMEKYNSEFDIKTAPVSVNWAEKGVVTPVKNQGNCGSCWTF 140

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           +    I+ ++   T  +  LS QQ++DC+ +  N GC GG L   L YV+ A GL  E++
Sbjct: 141 TTTGTIESRLALKTGSLVSLSEQQLLDCNRV--NAGCDGGVLSYALQYVESA-GLTTEDE 197

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPYK     C      +      ++++  + E  L   +A  GP+AV++NA     Q Y+
Sbjct: 198 YPYKAWNGTCNSTHKPVAAYTKGYTLIYTRSESDLMKAVAE-GPVAVALNA--DLLQYYS 254

Query: 246 SGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIA 301
            GI++  AC+S  VNH  L+VGY  N+    WI+KN W   WG+NGY  + +G N CGI 
Sbjct: 255 KGIFNPSACSST-VNHGGLVVGYEENATLPYWIIKNSWGATWGENGYFRMAKGYNLCGIT 313

Query: 302 NYAVY 306
           +  +Y
Sbjct: 314 SQPIY 318


>gi|256535829|gb|ACU82389.1| cathepsin L 1 [Pheronema raphanus]
          Length = 328

 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 166/301 (55%), Gaps = 16/301 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y     ++ ++L W+ N   + T N+   +GL  YTL  N  +D+  + +++ M  
Sbjct: 36  HKKVYYTLIEENFRRLIWEDN---LSTFNEMNSRGL-SYTLGTNEFADMTSKEFVEIMNG 91

Query: 77  LTHS-RIRRTL-VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
                RI +   V   ++  S+ + D +DWR KG +TP  NQ  CG+C+AFS   +++GQ
Sbjct: 92  YKPELRIDKLEDVNEVKNYSSIKLSDSVDWRSKGAVTPVKNQGQCGSCWAFSSTGSLEGQ 151

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE---DYPYKGK 191
            F +  ++   S  ++VDCS   GN GC GG + N   Y +    + KEE   DYPY  K
Sbjct: 152 YFINNDKLLSFSESELVDCSRRYGNNGCKGGLMDNAFRYWE----VYKEELESDYPYVAK 207

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C++ +   V  ISS+  +P   + +L+  + T+GPI+V+++AS  +FQLY SG+Y +
Sbjct: 208 DGPCRYSQDKGVTTISSYKNVPHFSQISLQDAVRTIGPISVAMDASHKSFQLYHSGVYSE 267

Query: 252 EACTSDYVNHAMLLVGYTRNS---WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308
             C+   ++H +L+VGY  +S   W++KN W   WG +GY  +   NN CG+     Y +
Sbjct: 268 SECSQTKLDHGVLVVGYGTSSEPFWLVKNSWGAGWGMDGYFEIAMRNNMCGLETEPSYPI 327

Query: 309 I 309
           +
Sbjct: 328 L 328


>gi|146147376|gb|ABQ01982.1| cathepsin [Fasciola gigantica]
          Length = 326

 Score =  176 bits (447), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 155/310 (50%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     G   YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGADDEHRRNIWEENVKHIQEHNLRHYLGFVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMPRASDILSHG--------IPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN+GC GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNMGCMGGLMENAYEYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++ R   V  ++ +  +    E  LK  +   GP AV+++     F +Y
Sbjct: 194 SYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELKNLVGAEGPAAVAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
           + GIY    C+S  VNHA+L VGY   S    WI+KN W   WG+ GY+ + R   N CG
Sbjct: 253 SGGIYQSRTCSSLRVNHAVLAVGYGTQSGTDYWIVKNSWGSSWGERGYIRMVRNRGNMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASLPMV 322


>gi|134025544|gb|AAI35768.1| LOC594890 protein [Xenopus (Silurana) tropicalis]
          Length = 333

 Score =  176 bits (447), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 163/304 (53%), Gaps = 14/304 (4%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           + +KK Y+ +  +  ++L W+   K I  HN E   GLH Y +  NHL D+      +EM
Sbjct: 35  QTHKKIYKNEGEELVRRLIWEDTLKFIMLHNLEYSMGLHTYEVGMNHLGDM----VAEEM 90

Query: 75  TRLTHSRIRRTLVR---SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           T    + I + +      P        P+ +DWR K  +T   +Q  C A +AFS   A+
Sbjct: 91  TDKQMNFIPQVIANITDVPVEISKSSPPESIDWRNKNCVTSVKDQGSCIASWAFSSIGAL 150

Query: 132 QGQIFKS-TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           + Q  K  T ++E LS+Q ++DCS   GN GC GG + ++  Y+    G+  E +YPY+G
Sbjct: 151 ECQNMKRRTGKLESLSVQNLLDCSQTYGNNGCKGGWVVSSFRYI-IDNGIELESNYPYQG 209

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           K   C +         +S+  LP  DE  LK  +  +GP++V+I+AS  TF++Y +G+Y 
Sbjct: 210 KDGKCSYTPVKKASVCTSYRQLPYGDEATLKQVVGLMGPVSVAIDASRKTFRMYKNGVYY 269

Query: 251 DEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAV 305
           D  C+S   +H++L+VGY        W++KN W   +GD GY+ + R  +N CGIAN+  
Sbjct: 270 DPNCSSSTPDHSVLVVGYGAEDGVEYWLVKNSWGTSFGDEGYIKMARNHHNNCGIANFGC 329

Query: 306 YALI 309
           + ++
Sbjct: 330 FPVV 333


>gi|3641698|dbj|BAA33398.1| preprocathepsin L [Bos taurus]
          Length = 301

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/258 (37%), Positives = 141/258 (54%), Gaps = 14/258 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-TLVR 88
           ++  W+ N K I  HNQE  +G HG+ +  N   D+    + + M    + + ++  L  
Sbjct: 48  RRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFH 107

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P     V +P  +DW +KG++TP  NQ  CG+C+AFS   A++GQ+F+ T ++  LS Q
Sbjct: 108 EPLL---VDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-ICKFKRPNIVVDIS 207
            +VDCS   GN GC GG + N   Y++  GGL  EE YPY    +  C +K P       
Sbjct: 165 NLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYK-PECSAAND 223

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
           +  V  PQ E AL   +ATVGPI+V+I+A   +FQ Y SGIY D  C+S  ++H +L+VG
Sbjct: 224 TGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVG 283

Query: 268 Y--------TRNSWILKN 277
           Y            WI+KN
Sbjct: 284 YGFEGTDSNNNKFWIVKN 301


>gi|31558997|gb|AAP49831.1| cathepsin L [Fasciola hepatica]
          Length = 326

 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 154/305 (50%), Gaps = 26/305 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y  +Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNNEY-NGADDQHRRNIWEENVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM+R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMSRASDILSHG--------VPYETNNRAVPDKIDWRESGYVTEVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN GC+GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++ +   V  ++ +  +P   E  LK  +   GP AV+++     F +Y
Sbjct: 194 SYPYTAVEGQCRYNKQLGVAKVTGYYTVPSGSEVELKNLVGAEGPAAVAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
            SGIY  + C+   VNHA+L VGY        WI+KN W   WG+ GY+ + R   N CG
Sbjct: 253 RSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCG 312

Query: 300 IANYA 304
           IA+ A
Sbjct: 313 IASLA 317


>gi|332374780|gb|AEE62531.1| unknown [Dendroctonus ponderosae]
          Length = 544

 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 173/311 (55%), Gaps = 18/311 (5%)

Query: 12  FPQKKYKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHP 67
           F   K+ K +R+  T+  ++L     ++ N + IH+HN++      G++L  NHL+D   
Sbjct: 238 FEFNKFTKKHRRIYTNQNERLLRMEIFRQNVRFIHSHNRKNV----GFSLSVNHLAD-KT 292

Query: 68  RHYIKEMTRLTHSRIRRTLVRSPESNESVL-IPDHLDWREKGFITPDWNQEDCGACYAFS 126
              +K +   T+S+     +  P ++E    +PD  DWR  G +TP  +Q  CG+C++F 
Sbjct: 293 ETELKALRGKTYSKEYNGGLPFPYTSEDFSNLPDQWDWRLYGAVTPVKDQSVCGSCWSFG 352

Query: 127 IASAIQGQIF-KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
               ++G  F K+   +  LS Q ++DCS   GN GC GG       +++  GG+  EED
Sbjct: 353 TIGTVEGAFFLKNGGHLVRLSQQALIDCSWGFGNNGCDGGEDFRAYQWIKKHGGIPTEED 412

Query: 186 Y-PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
           Y PY G+   C   +   V  +SSW+ +   DE+AL++ +   GPI+V+I+AS  TF  Y
Sbjct: 413 YGPYLGQDGYCHADKLPKVAKLSSWTNVTTNDENALRLAIFKHGPISVAIDASQRTFSFY 472

Query: 245 ASGIYDDEACTS--DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRC 298
           ++G+Y +E C +  D ++HA+L VGY      + W++KN WS++WG++GY+ +   NN C
Sbjct: 473 SNGVYFEEKCHNKVDELDHAVLAVGYGSINGNHYWLVKNSWSNYWGNDGYVLMSSKNNNC 532

Query: 299 GIANYAVYALI 309
           G+ +   Y  +
Sbjct: 533 GVMSAPTYVTL 543


>gi|297287735|ref|XP_002803218.1| PREDICTED: putative cathepsin L-like protein 6-like [Macaca
           mulatta]
          Length = 270

 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/221 (42%), Positives = 128/221 (57%), Gaps = 10/221 (4%)

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
           IP  +DWREKG++TP  NQ  CG+C+AFS   A++GQ+F  T ++  LS Q +VDCS   
Sbjct: 51  IPTSVDWREKGYVTPVKNQGMCGSCWAFSATGALEGQMFWKTGKLISLSEQNLVDCSWPQ 110

Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
           GN G  GG + N+  YVQ  GGL  E  YPY+GK   C++  P   V   +  V  P  E
Sbjct: 111 GNEGYNGGFMDNSFRYVQENGGLDSEASYPYEGKVKTCRY-NPKYSVANDTGFVDIPSRE 169

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----- 272
             L   +ATVGPI+V+++AS  +FQ Y  GIY +  C  + ++HAML VGY         
Sbjct: 170 KDLAKAVATVGPISVAVDASHFSFQFYKKGIYFEPRCDPEGLDHAMLTVGYGYEGADSDN 229

Query: 273 ---WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              W++KN W  +WG +GY+ + K   N CGIA  A Y  +
Sbjct: 230 NKYWLVKNSWGKNWGMDGYIKMAKDRRNNCGIATAASYPTV 270


>gi|24654434|ref|NP_725686.1| CG4847, isoform D [Drosophila melanogaster]
 gi|21645235|gb|AAM70880.1| CG4847, isoform D [Drosophila melanogaster]
 gi|255653098|gb|ACU24747.1| RH39096p [Drosophila melanogaster]
          Length = 420

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 150/305 (49%), Gaps = 19/305 (6%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A  +  +  + S    +   N    QG+H +    N  +DL    ++ ++T L 
Sbjct: 121 KTYLSAADRALHEGAFASTKNLVEAGNAAFAQGVHTFKQAVNAFADLTHSEFLSQLTGLK 180

Query: 79  HSRIRRT-------LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
            S   +        LV  P    +  IPD  DWRE G +TP   Q  CG+C+AF+   AI
Sbjct: 181 RSPEAKARAAASLKLVNLP----AKPIPDAFDWREHGGVTPVKFQGTCGSCWAFATTGAI 236

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPY 188
           +G  F+ T  +  LS Q +VDC  +   G  GC GG       ++ +   G+ +E  YPY
Sbjct: 237 EGHTFRKTGSLPNLSEQNLVDCGPVEDFGLNGCDGGFQEAAFCFIDEVQKGVSQEGAYPY 296

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
              +  CK+        +  ++ +PP+DE  LK  +AT+GP+A S+N    T + YA GI
Sbjct: 297 IDNKGTCKYDGSKSGATLQGFAAIPPKDEEQLKKVVATLGPVACSVNGL-ETLKNYAGGI 355

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYA 304
           Y+D+ C     NH++L+VGY     ++ WI+KN W   WG+ GY  L RG N C IA   
Sbjct: 356 YNDDECNKGEPNHSILVVGYGSEKGQDYWIVKNSWDDTWGEKGYFRLPRGKNYCFIAEEC 415

Query: 305 VYALI 309
            Y ++
Sbjct: 416 SYPVV 420


>gi|19922450|ref|NP_611221.1| CG4847, isoform A [Drosophila melanogaster]
 gi|24654437|ref|NP_725687.1| CG4847, isoform B [Drosophila melanogaster]
 gi|24654439|ref|NP_725688.1| CG4847, isoform C [Drosophila melanogaster]
 gi|45552699|ref|NP_995874.1| CG4847, isoform E [Drosophila melanogaster]
 gi|7302775|gb|AAF57850.1| CG4847, isoform A [Drosophila melanogaster]
 gi|15010382|gb|AAK77239.1| GH01592p [Drosophila melanogaster]
 gi|21645236|gb|AAM70881.1| CG4847, isoform B [Drosophila melanogaster]
 gi|21645237|gb|AAM70882.1| CG4847, isoform C [Drosophila melanogaster]
 gi|45445496|gb|AAS64820.1| CG4847, isoform E [Drosophila melanogaster]
 gi|220944958|gb|ACL85022.1| CG4847-PA [synthetic construct]
 gi|220954732|gb|ACL89909.1| CG4847-PA [synthetic construct]
          Length = 390

 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 150/305 (49%), Gaps = 19/305 (6%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A  +  +  + S    +   N    QG+H +    N  +DL    ++ ++T L 
Sbjct: 91  KTYLSAADRALHEGAFASTKNLVEAGNAAFAQGVHTFKQAVNAFADLTHSEFLSQLTGLK 150

Query: 79  HSRIRRT-------LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
            S   +        LV  P    +  IPD  DWRE G +TP   Q  CG+C+AF+   AI
Sbjct: 151 RSPEAKARAAASLKLVNLP----AKPIPDAFDWREHGGVTPVKFQGTCGSCWAFATTGAI 206

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPY 188
           +G  F+ T  +  LS Q +VDC  +   G  GC GG       ++ +   G+ +E  YPY
Sbjct: 207 EGHTFRKTGSLPNLSEQNLVDCGPVEDFGLNGCDGGFQEAAFCFIDEVQKGVSQEGAYPY 266

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
              +  CK+        +  ++ +PP+DE  LK  +AT+GP+A S+N    T + YA GI
Sbjct: 267 IDNKGTCKYDGSKSGATLQGFAAIPPKDEEQLKKVVATLGPVACSVNGL-ETLKNYAGGI 325

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYA 304
           Y+D+ C     NH++L+VGY     ++ WI+KN W   WG+ GY  L RG N C IA   
Sbjct: 326 YNDDECNKGEPNHSILVVGYGSEKGQDYWIVKNSWDDTWGEKGYFRLPRGKNYCFIAEEC 385

Query: 305 VYALI 309
            Y ++
Sbjct: 386 SYPVV 390


>gi|6650705|gb|AAF21977.1|AF115280_1 thiolproteinase SmTP1 [Sarcocystis muris]
          Length = 394

 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 153/299 (51%), Gaps = 18/299 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           Q+ + K Y  +    K+   +++N   IH HN +     + Y L+ N   DL    + + 
Sbjct: 93  QRDHNKFYATEEERLKRYAIFKNNLTYIHNHNMQG----YSYVLKMNKFGDLTLEEFRQR 148

Query: 74  MTRLTHSRIR---RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
                   +R   R +  + ES E   IP H+DWR++G +T   +Q DCG+C+AFS   A
Sbjct: 149 YLGYKKPDLRTPPREVDTTLESVEDNDIPTHVDWRQRGCVTSVKDQGDCGSCWAFSATGA 208

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++G     T ++  LS QQ+VDCS   GN GC GG +     YV   GG+   E+YPY  
Sbjct: 209 MEGVYCAKTGKLVNLSQQQLVDCSRFLGNQGCDGGRMEEAFEYVVENGGICSGENYPYMR 268

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           K  +CK  +   V  I+ +  +P + E ++K  LA   P++V+I A+   FQ Y  GI+D
Sbjct: 269 KDGVCKSSQCTSVATITGYRSVPRRSEKSMKTALALRSPVSVAIQANQAAFQFYYDGIFD 328

Query: 251 DEACTSDYVNHAMLLVGYTRNS------WILKNWWSHHWGDNGYMYL---KRGNNRCGI 300
               T+  ++H +LLVGY+  +      WI+KN W   WG  GYM +   K    +CG+
Sbjct: 329 APCGTN--LDHGVLLVGYSAETAGQGDYWIMKNSWGAAWGKGGYMLMAMHKGPAGQCGV 385


>gi|358334194|dbj|GAA34712.2| cathepsin L [Clonorchis sinensis]
          Length = 401

 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 151/291 (51%), Gaps = 18/291 (6%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI--- 71
           K YK++Y      +K+   +  N  +I+ HN    QG   YT+  N  SD      +   
Sbjct: 73  KTYKREYAGPVEQAKRFRIFTENFIRINQHNVRYIQGDTFYTMGINRFSDRVSWTILSQI 132

Query: 72  ----KEMTRLTHSRIRRTLVRSPESNESVLI--PDHLDWREKGFITPDWNQEDCGACYAF 125
               +E  RL   R  R   R+     ++    P  +DWR  G +TP  +Q  CG+C+AF
Sbjct: 133 FQTKEEFGRLLGFRGLRNTSRANSKYITIAAEPPASIDWRSTGAVTPVKDQGQCGSCWAF 192

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           S   AI+GQ F +T ++  LS QQ+VDCS   GN GC+GG + N   YV+   G+  E  
Sbjct: 193 SATGAIEGQHFMATKQLVSLSEQQLVDCSSHFGNFGCSGGWMDNAFKYVKHTHGITTETK 252

Query: 186 YPYKGKQS-----ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
           YPY   ++      C+F    I   ++    LP  +E ALK  +   GPI+V+I+AS  +
Sbjct: 253 YPYISGETGTPNPRCEFHGQAIAATVTGIVDLPRSNEFALKQAVGLHGPISVAIHASLES 312

Query: 241 FQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNG 287
           F  Y SG+Y DE C+SD ++HA+L+VGY   +    W++KN W   WG+ G
Sbjct: 313 FMGYKSGVYSDEECSSDQLDHAVLVVGYGEENGIPYWLIKNSWGFDWGEMG 363


>gi|156938919|gb|ABU97481.1| cathepsin L-like cysteine protease [Tyrophagus putrescentiae]
          Length = 333

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 163/307 (53%), Gaps = 9/307 (2%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   + ++ + Y     +  +K  + SN + I  HN+E   G   + +  N+ +D+    
Sbjct: 29  FNLFKTRFGRSYANFEEEIFRKRVFASNLEFIFNHNREFFAGNKNFNVAVNNFTDMSNTE 88

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDW-REKGFITPDWNQEDCGACYAF-SI 127
           +      L HS ++        S E   +P  +DW + K  +TP  NQE CG+C+AF S 
Sbjct: 89  FRARFNGLRHSGVQSAPAIHSASAEG--LPATVDWTKVKNVVTPIKNQEQCGSCWAFFSA 146

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
            ++++GQ    T ++  LS Q +VDCS   GN+GC GG +     YV    G+  E  YP
Sbjct: 147 VASMEGQHGLKTGKLVSLSEQNLVDCSAAEGNMGCEGGLMDQAFQYVIANKGIDTEMSYP 206

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           YK      +FK+ ++   I S+  +    E +L+  +ATVGPI+V I+AS  +FQ Y+SG
Sbjct: 207 YKAIDESWEFKKNSVGATIKSYVDVKTGSESSLQSAVATVGPISVGIDASQLSFQFYSSG 266

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           +Y++ AC++  ++H +  VGY   +    W +KN W   WG +GY+++ R   N+CGIA 
Sbjct: 267 VYEEPACSTTILDHGVTAVGYGALNGTPYWKVKNSWGTSWGMSGYIFMSRNKQNQCGIAT 326

Query: 303 YAVYALI 309
            A + ++
Sbjct: 327 AASWPVV 333


>gi|148235365|ref|NP_001083441.1| uncharacterized protein LOC398927 precursor [Xenopus laevis]
 gi|38014481|gb|AAH60424.1| MGC68723 protein [Xenopus laevis]
          Length = 333

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 158/301 (52%), Gaps = 8/301 (2%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           K +KK Y+ +  +  ++L W+   K I  HN E   GLH Y +  NHL D+       + 
Sbjct: 35  KTHKKLYKNEGEELVRRLIWEDTLKFIMLHNLEYSMGLHTYEVGMNHLGDMTAEEMTDKQ 94

Query: 75  TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
                S I  T     E ++S   P+ +DWR K  +T   +Q  C + +AFS   A++ Q
Sbjct: 95  MNFRPSEIANTTGLPVEISKST-PPESIDWRNKNCVTSVKDQGSCMSSWAFSSIGAMECQ 153

Query: 135 -IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
            + K T ++E LS+Q ++DCS   GN GC GG   ++  Y+    G+  E  YPY+GK  
Sbjct: 154 NMRKRTGKLESLSVQNLLDCSQNYGNNGCKGGWAVSSFRYI-IDNGIELESIYPYQGKDG 212

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C +         +S+  LP  +E  LK  +  +GP++V+I  S  TF++Y SG+Y D  
Sbjct: 213 KCSYTPVKKAPRCTSYRQLPYGNEATLKQVVGLMGPVSVAIEGSRKTFRMYKSGVYYDPN 272

Query: 254 CTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           C    V+H++L+VGY        W++KN W   +GD GY+ + R  +N CGIA++  + +
Sbjct: 273 CGGSTVDHSVLVVGYGAEDGVEYWLVKNSWGTSFGDEGYIKMARNRHNNCGIASFGCFPV 332

Query: 309 I 309
           I
Sbjct: 333 I 333


>gi|26245875|gb|AAN77413.1| digestive cysteine protease intestain [Leptinotarsa decemlineata]
          Length = 287

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 154/281 (54%), Gaps = 12/281 (4%)

Query: 36  SNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNES 95
           SN  +I  HNQ   +GL  Y +  N  +DL P  +++    L  ++  + L    + N  
Sbjct: 12  SNLLRIEEHNQNFSRGLSTYEMGVNKFADLTPEEFMERFRPLRKTK-PKFLSEQAKFNFD 70

Query: 96  VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSI 155
             +P  +DW ++G +T   +Q  CG+C+AFS   +++   F  T ++  LS QQ+VDC  
Sbjct: 71  GDLPAEVDWTKQGAVTEVKSQGSCGSCWAFSTTGSVESHNFIKTGKLISLSEQQLVDC-- 128

Query: 156 ISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQ 215
           +  N GCAGG +   L Y++ A G+M E+DYPY+ + + C+F      V I S+  +   
Sbjct: 129 VKNNSGCAGGWMDIALEYIE-ADGIMSEDDYPYEERNTTCRFNNSKAAVQIKSYKAIKKN 187

Query: 216 DEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC--TSDYVNHAMLLVGY----T 269
           DE  L+  +A  GP+ V+I  +   FQLYA GI +D  C  T   + HA+L+ GY     
Sbjct: 188 DEIDLQKAVALEGPVPVAIEVTI-AFQLYARGILNDPQCKNTEGDLTHAVLVTGYGSQDG 246

Query: 270 RNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
           ++ WI+KN W   +G +GY+ + R  +N+CGIA  A Y ++
Sbjct: 247 KDYWIVKNSWGAEYGMDGYLRMSRNADNQCGIATRASYPVL 287


>gi|330803820|ref|XP_003289900.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
 gi|325080011|gb|EGC33585.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
          Length = 328

 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 168/319 (52%), Gaps = 38/319 (11%)

Query: 11  IFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHL-------- 62
           +F QK+Y+  ++          +W   H+K +T+++   +    YT+ ++++        
Sbjct: 22  VFSQKQYQTAFQ----------NWMVKHQKSYTNDEFGSR----YTIFQDNMDFVTKWNQ 67

Query: 63  --SD-LHPRHYIKEMTRLTHSRI---RRTLVRSPESNESVL----IPDHLDWREKGFITP 112
             SD +   + + ++T   + RI    +T V+ P     V      P  +DWR  G +T 
Sbjct: 68  KGSDTILGLNSMADLTNQEYQRIYLGTKTTVKKPNLIIGVTDVSKAPASVDWRANGAVTA 127

Query: 113 DWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLN 172
             NQ  CG CY+FS   +++G    ++ ++  LS QQ++DCS   GN GC GG + N+  
Sbjct: 128 VKNQGQCGGCYSFSTTGSVEGIHEITSKQLVSLSEQQILDCSGSEGNNGCDGGLMTNSFE 187

Query: 173 YVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAV 232
           Y+   GGL  E  YPY+G    CKF + NI   I+ +  +    E  L+  +A   P++V
Sbjct: 188 YIIAVGGLDTEASYPYEGVVGKCKFNKANIGATITGYKNVKSGSESDLQTAVAAQ-PVSV 246

Query: 233 SINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGY 288
           +I+AS ++FQLY+SG+Y + AC+S  ++H +L VGY   S    WI+KN W   WG+ G+
Sbjct: 247 AIDASQNSFQLYSSGVYYEPACSSTQLDHGVLAVGYGSQSGQDYWIVKNSWGADWGEKGF 306

Query: 289 MYLKRGN-NRCGIANYAVY 306
           + + R   N CGIA  A Y
Sbjct: 307 ILMARNKHNNCGIATMASY 325


>gi|7271889|gb|AAF44675.1|AF239264_1 cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 154/310 (49%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGADDEHRRNIWEENVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMPRASDILSHG--------IPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN GC GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNYGCMGGLMENAYEYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++ R   V  ++ +  +    E  LK  +   GP AV+++     F +Y
Sbjct: 194 SYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELKNLVGAEGPAAVAVDVESD-FTMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
           + GIY    C+S  VNHA+L VGY        WI+KN W   WG+ GY+ + R   N CG
Sbjct: 253 SGGIYQSRTCSSLRVNHAVLAVGYGTQGGTDYWIVKNSWGSSWGERGYIRMVRNRGNMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASLPMV 322


>gi|91085671|ref|XP_971698.1| PREDICTED: similar to cathepsin L-like protein; cysteine proteinase
           [Tribolium castaneum]
 gi|270011034|gb|EFA07482.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 160/313 (51%), Gaps = 24/313 (7%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K Y     ++ +K  +Q   ++I  HN+   +GL  YT+  N  +D+ P    +E
Sbjct: 31  KKTHEKSYLNAKEEAFRKQIFQKKLERIEAHNERFNKGLETYTMGINMFTDMTP----EE 86

Query: 74  MTRLTHSRIRRTLVRSP----------ESNESVLIPDHLDWREKGFITPDWNQEDCGACY 123
           M   TH  I   +V  P            N SV  P   DWR+KG +T   NQ  CG+C+
Sbjct: 87  MRPYTHGLIEPAVVPKPLVEIKSRADLGLNHSVQYPASFDWRDKGMVTGVKNQGGCGSCW 146

Query: 124 AFSIASAIQGQIFKSTSEIEELSI--QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLM 181
           AFS   AI+ Q+  +     ++S+  QQ+VDC   +   GC GG + +   Y+   GG+ 
Sbjct: 147 AFSSTGAIESQVKIAKGANTDISVSEQQLVDCDTAAD--GCGGGWMTDAFTYIAQTGGID 204

Query: 182 KEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTF 241
            E  YPYKG    C F    +   +  ++ L   DE+ L   +++ GP++V+ +A    F
Sbjct: 205 SESSYPYKGVDESCHFMSDKVAAKLKGYAYLTGPDENMLADMVSSKGPVSVAFDAEGD-F 263

Query: 242 QLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NN 296
             Y+ G+Y +  C ++   HA+L+VGY     ++ W++KN W   WG++GY  + R   N
Sbjct: 264 GSYSGGVYYNPNCATNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGEHGYFKIARNKGN 323

Query: 297 RCGIANYAVYALI 309
            CGIA+ A Y ++
Sbjct: 324 HCGIASKASYPVL 336


>gi|42794048|dbj|BAD11762.1| cahepsin L-like cysteine protease [Brugia malayi]
          Length = 371

 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 163/315 (51%), Gaps = 25/315 (7%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           ++KY K   +   + ++ + +  N K+I  HN+  ++    Y L  NHL+D+ P  + K 
Sbjct: 58  KRKYNKRDEEINLEHRRFMTYLKNVKEIEKHNERYERNEETYELAINHLADMLPEEFRKL 117

Query: 73  ---EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
              +  ++T     +  +R   +     +P  +DWR  G +T   +Q  CG+C+ FS   
Sbjct: 118 HGFQSRKITSKNNFKNTIRMKINGP---LPKSIDWRTSGAVTKVKDQGYCGSCWTFSAVG 174

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
           A++GQ F  T ++ ELS+Q ++DCS  + GN GC GG +     YV    G+  E+ YPY
Sbjct: 175 ALEGQHFLQTGKLVELSMQNLLDCSDDTYGNYGCDGGLMMEAFEYVVKNDGIDTEKSYPY 234

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +G Q+ C++          +  +LP  DE  L+  +AT+GPI+V+++A    F  Y  GI
Sbjct: 235 QGYQNTCRYSNSTRGTTAYAGKLLPEGDELQLQAAIATIGPISVAVDAKLMKF--YRRGI 292

Query: 249 YDDEACTSDYVNHAMLLVGY----------TRNS---WILKNWWSHHWGDNGYMYLKRGN 295
           +    CT+  + HA+L VGY          T+ S   W+LKN WS  WG  GY+ L R  
Sbjct: 293 FSTSKCTTR-MGHALLAVGYGTEEVKLQNGTKKSVDYWLLKNSWSKRWGIGGYLKLARNQ 351

Query: 296 -NRCGIANYAVYALI 309
            N CGI  YA Y L+
Sbjct: 352 ENMCGIGFYACYPLV 366


>gi|391328503|ref|XP_003738728.1| PREDICTED: digestive cysteine proteinase 3-like [Metaseiulus
           occidentalis]
          Length = 506

 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 131/212 (61%), Gaps = 5/212 (2%)

Query: 103 DWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGC 162
           D+  +G++TP  +Q  CG+C+AFS   +++GQ FK+T ++  LS Q +VDCS   GN GC
Sbjct: 295 DYWLEGYVTPVKDQGQCGSCWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSGDEGNNGC 354

Query: 163 AGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKV 222
            GG +     Y++  GG+  EE YPY  +   C FK   +   ++ +  +    E AL+ 
Sbjct: 355 EGGLMDQGFTYIKNNGGIDTEESYPYNAEDGDCAFKSNAVGARVTGFVDIDSGSEKALQK 414

Query: 223 TLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNW 278
            +ATVGP++V+I+AS  +FQLY  GIYD+ AC+S  ++H +L VGY   +    W++KN 
Sbjct: 415 AVATVGPVSVAIDASNDSFQLYKEGIYDEPACSSTQLDHGVLAVGYGSENGVDYWLVKNS 474

Query: 279 WSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           W+  WG +GY+ + R  +N+CGIA+ A Y  +
Sbjct: 475 WNTVWGQDGYIKMARNKDNQCGIASQASYPTV 506



 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 156/292 (53%), Gaps = 20/292 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY-IK 72
           Q  + K+Y  +    ++++ +  N  +I+ HN     GL  Y +  N  +D+    Y + 
Sbjct: 35  QATFGKNYDAQQAAERQRI-FNENVDRINAHNLAHDLGLTSYRMGLNEFTDMSRSEYELV 93

Query: 73  EMTRLTHSRIRRT-----LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
              R +  +  RT     L ++P+      +P  +D+R+ G +TP  NQ  CG+C+AFS 
Sbjct: 94  RGLRYSGEQTARTGHPFTLTQNPDRE----LPKKVDYRKSGHVTPVKNQGLCGSCWAFSA 149

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             +++GQ+      +  LS Q ++DCS    N GC GG +     Y++  GG+  EE YP
Sbjct: 150 TGSLEGQLSIQNGTLVSLSEQNLLDCS--RENQGCDGGYMDKAFEYIKKNGGIDTEESYP 207

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y G++  C FK+ NI   ++    +P +DE ALK+ +A +GPI+V I+AS  +F+ Y  G
Sbjct: 208 YTGRKGKCMFKKKNIGARVTGHVDVPAEDEQALKLAVAKIGPISVGIDASKDSFRFYKEG 267

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCG 299
           IYD+ +C++  ++H +L+VGY   S   K++W       GY+   +   +CG
Sbjct: 268 IYDESSCSTSQLDHGVLVVGY--GSEKGKDYWLE-----GYVTPVKDQGQCG 312


>gi|156392785|ref|XP_001636228.1| predicted protein [Nematostella vectensis]
 gi|156223329|gb|EDO44165.1| predicted protein [Nematostella vectensis]
          Length = 513

 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 156/297 (52%), Gaps = 14/297 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           Y+K Y       K+K  ++ N + I + N++      GY+L+ NH++D+     +  M  
Sbjct: 217 YRKRYPSAHEHEKRKDIYRHNMRFIKSRNRQHL----GYSLKPNHMADMTDAE-VNRMKG 271

Query: 77  LTHSR---IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           L H     I  +    P+ +  V +P H+DWR+ G +    +Q  CG+CYAF++A A++G
Sbjct: 272 LLHEEPPLIGDSPFSIPDKDRGVPLPPHVDWRKAGAVNSVKSQGICGSCYAFAVAGALEG 331

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP-YKGKQ 192
             F  T    +LS QQ+VDC+   GN GC GG     + ++   GGL  EE Y  Y  ++
Sbjct: 332 AHFIKTGLKLDLSEQQIVDCTWGFGNRGCKGGYPYRAMQWILKHGGLATEESYGRYLAQE 391

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C FK  +I   +  +  +   +   LK+ +A  GP+++ +N  P TF+ Y SGIY D 
Sbjct: 392 GYCHFKNTSIGARLDKYMSIRQGNTSQLKLAVAFYGPVSILVNTQPKTFKFYGSGIYYDT 451

Query: 253 ACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAV 305
            CT   ++HA L VGY        WI+KN WS  WG+ GY+ +   ++ CG+A  AV
Sbjct: 452 QCTHA-LDHAALAVGYGEEKGVSYWIVKNSWSAMWGEEGYIKIAMKDDNCGVAQKAV 507


>gi|47199802|emb|CAF88807.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 261

 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 141/260 (54%), Gaps = 15/260 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHS---RIRRTL 86
           +++ W+ N KKI  HN E   G H Y L  NH  D+    + + M    H    + R +L
Sbjct: 5   RRMVWEKNLKKIELHNLEHSMGQHSYRLGMNHFGDMTHEEFRQIMNGYKHKPQRKFRGSL 64

Query: 87  VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELS 146
              P   E+   P  +DWR+KG++TP  +Q  CG+C+AFS   A++GQ F+ T ++  LS
Sbjct: 65  FMEPNFLEA---PRAVDWRDKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRQTGKLVSLS 121

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG-KQSICKFKRPNIVVD 205
            Q +VDCS   GN GC GG +     Y++  GGL  E  YPY       C +   N   +
Sbjct: 122 EQNLVDCSRPEGNEGCNGGLMDQAFQYIKDNGGLDSEASYPYLATDDQPCHYDPSNNSAN 181

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
            + +  +P   E AL   +A+VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L+
Sbjct: 182 ETGFVDVPSGSERALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEKECSSEELDHGVLV 241

Query: 266 VGY--------TRNSWILKN 277
           VGY         +  WI+KN
Sbjct: 242 VGYGFQGEDVDGKKFWIVKN 261


>gi|307175095|gb|EFN65237.1| Cathepsin L [Camponotus floridanus]
          Length = 372

 Score =  174 bits (441), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 158/307 (51%), Gaps = 18/307 (5%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI----- 71
           +KK Y+    +  +   +  N +KI  HN++ +     Y L  N   D+     I     
Sbjct: 70  HKKVYKSPIEEGYRMKIFLDNKRKIVEHNRKYEMKEVNYKLGMNKYGDMLHHELINTLNG 129

Query: 72  --KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
             K +T      I  T +       +V +P  +DWR+KG +T   +Q  CG+C+AFS   
Sbjct: 130 FNKSVTVSEEQLIGATFIEPA----NVELPKSVDWRKKGAVTAIKDQGQCGSCWAFSSTG 185

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ F+ +  +  LS Q ++DCS   GN GC GG +     Y++   GL  E+ YPY+
Sbjct: 186 ALEGQHFRQSGVLVSLSEQNLIDCSGKYGNNGCNGGLMDYAFRYIKENKGLDTEKSYPYE 245

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            +   C++   N       +  +P  DE  LK  +AT+GPI+V+I+AS  +F  Y+ G+Y
Sbjct: 246 AENDQCRYNPKNSGASDVGFVDIPEGDEDKLKAAVATIGPISVAIDASHESFHFYSEGVY 305

Query: 250 DDEACTSDYVNHAMLLVGYTRNS------WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
            +  C+   ++H +L+VGY  +S      W++KN W   WG+ GY+ + R   N CGIA+
Sbjct: 306 YEPECSPANLDHGVLIVGYGTDSGTGEDYWLVKNSWGETWGEKGYIKMARNKENHCGIAS 365

Query: 303 YAVYALI 309
            A Y L+
Sbjct: 366 SASYPLV 372


>gi|41152538|gb|AAR99518.1| cathepsin L protein [Fasciola hepatica]
          Length = 326

 Score =  174 bits (441), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 156/310 (50%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGADDEHRRNIWEENVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM+R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMSRASDILSHG--------VPYETNNRAVPDKIDWRESGYVTEVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN GC+GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++     V  ++ +  +    E  LK  + + GP AV+++     F +Y
Sbjct: 194 SYPYTAVEGQCRYNEQLGVAKVTGYYTVHSGSEVELKNLVGSEGPAAVAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
            SGIY  + C+   VNHA+L VGY        WI+KN W   WG+ GY+ + R   N CG
Sbjct: 253 RSGIYQSQTCSPLSVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASLPMV 322


>gi|46948144|gb|AAT07054.1| cathepsin L-like cysteine proteinase [Brugia malayi]
          Length = 368

 Score =  174 bits (441), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 163/315 (51%), Gaps = 25/315 (7%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK- 72
           ++KY K   +   + ++ + +  N K+I  HN+  ++    Y L  NHL+D+ P  + K 
Sbjct: 55  KRKYNKRDEEINLEHRRFMTYLKNVKEIEKHNERYERNEETYELAINHLADILPEEFRKL 114

Query: 73  ---EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
              +  ++T     +  +R   +     +P  +DWR  G +T   +Q  CG+C+ FS   
Sbjct: 115 HGFQSRKITSKNNFKNTIRMKINGP---LPKSIDWRTSGAVTKVKDQGYCGSCWTFSAVG 171

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
           A++GQ F  T ++ ELS+Q ++DCS  + GN GC GG +     YV    G+  E+ YPY
Sbjct: 172 ALKGQHFLQTGKLVELSMQNLLDCSDDTYGNYGCDGGLMMEAFEYVVKNDGIDTEKSYPY 231

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +G Q+ C++          +  +LP  DE  L+  +AT+GPI+V+++A    F  Y  GI
Sbjct: 232 QGYQNTCRYSNSTRGTTAYAGKLLPEGDELQLQAAIATIGPISVAVDAKLMKF--YRRGI 289

Query: 249 YDDEACTSDYVNHAMLLVGY----------TRNS---WILKNWWSHHWGDNGYMYLKRGN 295
           +    CT+  + HA+L VGY          T+ S   W+LKN WS  WG  GY+ L R  
Sbjct: 290 FSTSKCTTR-MGHALLAVGYGTEEVKLQNGTKKSVDYWLLKNSWSKRWGIGGYLKLARNQ 348

Query: 296 -NRCGIANYAVYALI 309
            N CGI  YA Y L+
Sbjct: 349 ENMCGIGFYACYPLV 363


>gi|41055337|ref|NP_956720.1| cathepsin S, a [Danio rerio]
 gi|32451845|gb|AAH54668.1| Cathepsin S, a [Danio rerio]
          Length = 239

 Score =  174 bits (441), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 134/225 (59%), Gaps = 6/225 (2%)

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
           SP S ++  +P  ++W E G ++P  NQ  CG+C+AFS   +++ Q+ + T+ +  LS Q
Sbjct: 17  SPPSLQT--LPQRVNWTEHGMVSPVQNQGPCGSCWAFSAVGSLEAQMKRRTAALVPLSAQ 74

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
            ++DCS+  GN GC GG L     YV    G+     YPY+ K+ +C++         + 
Sbjct: 75  NLLDCSVSLGNRGCKGGFLSRAFLYVIQNRGIDSSTFYPYEHKEGVCRYSVSGRAGYCTG 134

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY 268
           + ++P  +E AL+  +A +GP++V INA   +F  Y SGIY+D  C+S  +NHA+L+VGY
Sbjct: 135 FRIVPRHNEAALQSAVANIGPVSVGINAKLLSFHRYRSGIYNDPKCSSALINHAVLVVGY 194

Query: 269 ----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
                ++ W++KN W   WG+NGY+ + R  N CGI+++ +Y  I
Sbjct: 195 GSENGQDYWLVKNSWGTAWGENGYIRMARNKNMCGISSFGIYPTI 239


>gi|50657029|emb|CAH04632.1| cathepsin L [Suberites domuncula]
          Length = 324

 Score =  174 bits (441), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 167/322 (51%), Gaps = 30/322 (9%)

Query: 7   IIIFIFPQ------KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           +  F FP+      +++ K+Y ++  + ++   WQSN K I +HN  + +   GYTL  N
Sbjct: 14  VAAFDFPEEWVAWKQEHSKEYTEELEELRRHTIWQSNKKFIDSHNSVSDK--FGYTLEMN 71

Query: 61  HLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLI--------PDHLDWREKGFITP 112
              DL         + +   +I    +    +N++ L            +DWR+KG ++ 
Sbjct: 72  EFGDL---------SGVEFKQIYNGYIMQERANDTKLFTASPYMEPAASVDWRQKGVVSE 122

Query: 113 DWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLN 172
             NQ  CG+C++FS   +++GQ       +  LS Q ++DCS   GN GC GG + +   
Sbjct: 123 VKNQGQCGSCWSFSATGSLEGQHALKMGRLVSLSEQNLMDCSSRFGNHGCKGGIMDDAFR 182

Query: 173 YVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAV 232
           YV    G+  E  YPY  K   C+F + N+    +S+  +    E +L    A +GPI+V
Sbjct: 183 YVISNHGVDTESSYPYTAKDGYCRFNQNNVGATETSYRDIARGSESSLTQASAQIGPISV 242

Query: 233 SINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGY 288
           +I+AS  +FQ Y +G+Y + +C+S  ++H +L+VGY     ++ +I+KN W   WG +GY
Sbjct: 243 AIDASHRSFQFYKNGVYYEPSCSSSRLDHGVLVVGYGTEGGQDYFIVKNSWGTRWGMDGY 302

Query: 289 MYLKRG-NNRCGIANYAVYALI 309
           + + R   N CGIA+ A Y ++
Sbjct: 303 IMMSRNRRNNCGIASQASYPIV 324


>gi|281427380|ref|NP_001163996.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|281427798|ref|NP_001164001.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|270001241|gb|EEZ97688.1| cathepsin L precursor [Tribolium castaneum]
 gi|270016928|gb|EFA13374.1| hypothetical protein TcasGA2_TC001950 [Tribolium castaneum]
          Length = 328

 Score =  174 bits (441), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 155/307 (50%), Gaps = 25/307 (8%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y     + ++K  +Q N  KI  HN +  +G   YT   N  +D+    ++     
Sbjct: 33  HKKQYSSPIEELRRKAIFQDNLVKIEEHNAKFAKGEVTYTKAVNQFADMTADEFM----- 87

Query: 77  LTHSRIRRTLVRSPESNESVLIP---------DHLDWREKGFITPDWNQEDCGACYAFSI 127
              + + R L   P+ NE + IP           +DWR K  +T   +Q  CG+C++FS 
Sbjct: 88  ---AYVNRGLATKPKMNEKLRIPFVKSGKPAAAEVDWRSKA-VTEVKDQGQCGSCWSFST 143

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++GQ+  S   +  LS Q +VDCS   GN GC GG + +  +Y+    G+M E  YP
Sbjct: 144 TGAVEGQLAISGKGLTSLSEQNLVDCSSQYGNAGCNGGWMDSAFDYIH-DNGIMSESAYP 202

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y      C+F     V  +  +  +P  DE AL+  +A  GP+AV+++A+    QLY+ G
Sbjct: 203 YTAMDGNCRFDASQSVTSLQGYYDIPSGDESALQDAVANNGPVAVALDATEE-LQLYSGG 261

Query: 248 IYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           +  D  C++  +NH +L+VGY     ++ WI+KN W   WG+ GY    R  NN CGIA 
Sbjct: 262 VLYDTTCSAQALNHGVLVVGYGSEGGQDYWIVKNSWGSGWGEQGYWRQARNRNNNCGIAT 321

Query: 303 YAVYALI 309
            A Y  +
Sbjct: 322 AASYPAL 328


>gi|291463491|pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant
 gi|291463492|pdb|3IV2|B Chain B, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant
 gi|291463519|pdb|3K24|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant In
           Complex With Gln-Leu-Ala Peptide
 gi|291463520|pdb|3K24|B Chain B, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant In
           Complex With Gln-Leu-Ala Peptide
          Length = 220

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 128/220 (58%), Gaps = 10/220 (4%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWREKG++TP  NQ  CG+ +AFS   A++GQ+F+ T  +  LS Q +VDCS   G
Sbjct: 2   PRSVDWREKGYVTPVKNQGQCGSAWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG 61

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG +     YVQ  GGL  EE YPY+  +  CK+     V + + +  +P Q E 
Sbjct: 62  NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQ-EK 120

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS------ 272
           AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY   S      
Sbjct: 121 ALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNN 180

Query: 273 --WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
             W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 181 KYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220


>gi|157835400|pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor,
           Chagasin, In Complex With Human Cathepsin L
          Length = 221

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 128/220 (58%), Gaps = 10/220 (4%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWREKG++TP  NQ  CG+ +AFS   A++GQ+F+ T  +  LS Q +VDCS   G
Sbjct: 3   PRSVDWREKGYVTPVKNQGQCGSAWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG 62

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG +     YVQ  GGL  EE YPY+  +  CK+     V + + +  +P Q E 
Sbjct: 63  NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQ-EK 121

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS------ 272
           AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY   S      
Sbjct: 122 ALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNN 181

Query: 273 --WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
             W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 182 KYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 221


>gi|111036376|dbj|BAF02517.1| cathepsin L-like proteinase [Echinococcus multilocularis]
          Length = 338

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 151/276 (54%), Gaps = 8/276 (2%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE-MTRLTHSRIRRTLVRSPESNESVL-I 98
           I  HN+  + GL  Y+   N  +DL    + +  +     SR+     ++ +++ SV  +
Sbjct: 64  IKGHNRRVKAGLESYSTALNQFADLEVSEFTERFLGTRPESRVAGKSGKTWKASTSVSDL 123

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +DWR+K  +T   NQ +CG+C+AFS   A++G + K T ++  LS QQ+VDC++ +G
Sbjct: 124 PDMVDWRDKNLVTEVKNQGNCGSCWAFSSTGALEGALAKKTGKLISLSEQQLVDCTLENG 183

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   Y++    +  E  YPY+     C++     V  ++    +P  +E 
Sbjct: 184 NDGCNGGYMSNAFKYLE-GHSIEPESAYPYRATDGPCRYNESLGVGSVTDIGDIPEGNET 242

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WI 274
           AL   +ATVGPI+++I+AS   F  Y  GIY    C+S ++NH +L +GY +      W+
Sbjct: 243 ALMEAVATVGPISIAIDASTLGFMFYHHGIYKSHWCSSKFLNHGVLAIGYGKLDGKPYWL 302

Query: 275 LKNWWSHHWGDNGY-MYLKRGNNRCGIANYAVYALI 309
           +KN W   WG  GY M  K  +N CG+A+ A +  +
Sbjct: 303 VKNSWGSRWGMKGYIMMAKDYHNMCGVASLADFPYV 338


>gi|57118005|gb|AAW34134.1| cysteine protease gp2a [Zingiber officinale]
          Length = 381

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 154/287 (53%), Gaps = 18/287 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           ++ N + +  HN  A +G H + L  N  +DL    Y     R   SR+RR+      S 
Sbjct: 77  FKENLQFVDEHNAAADRGEHTFLLGMNRFADLTNEEYRTRFLR-DFSRLRRSASGKISSR 135

Query: 94  ----ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
               E   +PD +DWRE G + P  NQ  CG+C+AFS  +A++G     T ++  LS QQ
Sbjct: 136 YRLREGDDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQ 195

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW 209
           +VDC+  + N GC GG +     ++   GG+  EE YPY+G+  IC       VV I S+
Sbjct: 196 LVDCT--TANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQNGICNSTVNAPVVSIDSY 253

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY- 268
             +P  +E +L+  +A   P++V+++A+   FQLY SGI+      S   NHA+ +VGY 
Sbjct: 254 ENVPSHNEQSLQKAVANQ-PVSVTMDAAGRDFQLYRSGIFTGSCNIS--ANHALTVVGYG 310

Query: 269 ---TRNSWILKNWWSHHWGDNGYMYLKRG----NNRCGIANYAVYAL 308
               ++ WI+KN W  +WG++GY+  +R     N +CGI  +A Y +
Sbjct: 311 TENDKDFWIVKNSWGKNWGESGYIRAERNIENPNGKCGITRFASYPV 357


>gi|283046734|ref|NP_001164314.1| cathepsin L precursor [Tribolium castaneum]
 gi|270001247|gb|EEZ97694.1| cathepsin L precursor [Tribolium castaneum]
          Length = 328

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 154/307 (50%), Gaps = 25/307 (8%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK Y     + K+   +Q N  KI  HN +  +G   Y+   N  +D+    ++     
Sbjct: 33  HKKQYSSPIEELKRMAIFQDNLVKIEEHNAKFAKGEVTYSKAVNQFADMTADEFM----- 87

Query: 77  LTHSRIRRTLVRSPESNESVLIP---------DHLDWREKGFITPDWNQEDCGACYAFSI 127
              + + R L   P+ NE + +P           +DWR    ++   NQ  CG+C++FS 
Sbjct: 88  ---AYVNRGLATKPKKNEKLRLPFVQSDKPAAAEVDWRNSA-VSEVKNQGQCGSCWSFST 143

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++GQ+  S   +  LS Q +VDCS   GN GC GG + +  +Y+    G+M E  YP
Sbjct: 144 TGAVEGQLAISGRGLTSLSEQNLVDCSSAYGNAGCNGGWMDSAFDYIH-DNGIMSESAYP 202

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y   +  C+F     V  +  +  LP  DE+ALK  +A  GPIAV+++A+    Q Y+ G
Sbjct: 203 YTASEGSCRFNPSESVTSLQGYYDLPSGDENALKSAVANNGPIAVALDATDE-LQFYSGG 261

Query: 248 IYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           +  D  C++  +NH +L+VGY     ++ WI+KN W   WG+ GY    R  NN CGIA 
Sbjct: 262 VLYDTTCSAQALNHGVLVVGYGSEGGQDYWIVKNSWGSGWGEQGYWRQARNRNNNCGIAT 321

Query: 303 YAVYALI 309
            A Y  +
Sbjct: 322 AASYPAL 328


>gi|222820543|gb|ACM67633.1| cathepsin 1L [Fasciola hepatica]
          Length = 326

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 16/305 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN    +GL  Y L  N  +DL        
Sbjct: 25  KRMYNKEY-NGADDEHRRNIWEQNVKHIEEHNLRHDRGLVTYKLGLNQFTDLTFEEFKAK 83

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+ ++ S +   +    E N+   +P  +DWR+ G++T   NQ  CG+C+AFS   
Sbjct: 84  YLMEMSPVSES-LSDGISYEAEGND---VPASIDWRQYGYVTEVKNQGQCGSCWAFSAVG 139

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           AI+GQ  K        S QQ+VDC+   GN GC GG + N   Y++ + GL     YPY+
Sbjct: 140 AIEGQYVKRFQNQTLFSEQQLVDCTRRFGNHGCGGGWMENAYKYLKNS-GLETASYYPYQ 198

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G +  C++++   V  ++    +   DE  L   +   GP AV+++A    F +Y SGI+
Sbjct: 199 GWEYQCQYRKELGVAKVTGAYTVHSGDEMKLMQMVGREGPAAVAVDAQS-DFYMYESGIF 257

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
             + CTS  V HA+L VGY   S    WILKN W   WG++GYM   R   N C IA+ A
Sbjct: 258 QSQTCTSRSVTHAVLAVGYGTESGTDYWILKNSWGKWWGEDGYMRFARNRGNMCAIASVA 317

Query: 305 VYALI 309
              ++
Sbjct: 318 SVPMV 322


>gi|310751866|gb|ADP09371.1| cathepsin L-like proteinase [Fasciola hepatica]
          Length = 326

 Score =  173 bits (439), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 157/306 (51%), Gaps = 18/306 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+R   S I    V    +N +V  PD +DWRE G++T   +Q +CG+C+AFS   
Sbjct: 84  YLTEMSRA--SDILSHGVPYEANNRAV--PDKIDWRESGYVTEVKDQGNCGSCWAFSTTG 139

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPY 188
            ++GQ  K+       S QQ+VDCS   GN GC GG + N   Y+ QF  GL  E  YPY
Sbjct: 140 TMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMENAYEYLKQF--GLETESSYPY 197

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +  +  C++ +   V  ++ +  +    E  LK  +   GP AV+++     F +Y+ GI
Sbjct: 198 RAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGAEGPAAVAVDVESD-FMMYSGGI 256

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           Y  + C+   +NHA+L VGY        WI+KN W   WG+ GY+ + R   N CGIA+ 
Sbjct: 257 YQSQTCSPLGLNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASL 316

Query: 304 AVYALI 309
           A   ++
Sbjct: 317 ASLLMV 322


>gi|169791725|pdb|2VHS|A Chain A, Cathsilicatein, A Chimera
 gi|169791726|pdb|2VHS|B Chain B, Cathsilicatein, A Chimera
 gi|169791727|pdb|2VHS|C Chain C, Cathsilicatein, A Chimera
 gi|169791728|pdb|2VHS|D Chain D, Cathsilicatein, A Chimera
          Length = 217

 Score =  173 bits (439), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 96/217 (44%), Positives = 125/217 (57%), Gaps = 7/217 (3%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWREKG++TP  NQ  CGA YAFS   A++GQ+F+ T  +  LS Q +VDCS   G
Sbjct: 2   PRSVDWREKGYVTPVKNQGQCGASYAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG 61

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG +     YVQ  GGL  EE YPY+  +  CK+  P   V      V  P+ E 
Sbjct: 62  NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY-NPKYSVANDVGFVDIPKQEK 120

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----TRNSW 273
           AL   +ATVGPI+V+I+A   +F  Y  GIY    C+S  +NHAML+VGY      +  W
Sbjct: 121 ALMKAVATVGPISVAIDAGHESFLFYKEGIYFSSDCSSSSLNHAMLVVGYGFISNNQKYW 180

Query: 274 ILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           ++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 181 LVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 217


>gi|116488416|gb|AAB41670.2| secreted cathepsin L 1 [Fasciola hepatica]
          Length = 326

 Score =  173 bits (439), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 155/310 (50%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM+R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMSRASDILSHG--------VPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN GC GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMENAYQYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++ +   V  ++ +  +    E  LK  +   GP AV+++     F +Y
Sbjct: 194 SYPYTAVEGQCRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
            SGIY  + C+   VNHA+L VGY        WI+KN W   WG+ GY+ + R   N CG
Sbjct: 253 RSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASLPMV 322


>gi|195488703|ref|XP_002092426.1| GE11675 [Drosophila yakuba]
 gi|194178527|gb|EDW92138.1| GE11675 [Drosophila yakuba]
          Length = 384

 Score =  173 bits (439), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 153/305 (50%), Gaps = 19/305 (6%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A  +  +  + S    +   N    QG++ +    N  +DL    ++ ++T L 
Sbjct: 85  KTYLSAADRALHETAFASTKNLVDAGNAAFAQGVNTFKQTVNAFADLTHSEFLSQLTGLK 144

Query: 79  HS-----RIRRTL--VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
            S     R   +L  V+ PE      IPD  DWRE G +TP   Q  CG+C+AF+   AI
Sbjct: 145 RSPEAKARAAASLKEVQLPEKP----IPDAFDWREHGGVTPVKFQGTCGSCWAFATTGAI 200

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPY 188
           +G  F+ T  +  LS Q +VDC  ++  G  GC GG       ++ +   G+ +   YPY
Sbjct: 201 EGHTFRKTGSLPILSEQNLVDCGPVADFGLNGCDGGFQEAAFCFIDEVQKGVSQAGAYPY 260

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
              +  CK+        +  ++ +PP+DE  +K  +AT+GPIA S+N    T + YA GI
Sbjct: 261 IDSKDTCKYDGSKSGASLQGFAAIPPKDEEQMKKVVATLGPIACSVNGL-ETLKNYAGGI 319

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYA 304
           Y+D+ C     NH++L+VGY     ++ WI+KN W   WG+ GY  L RG N C IA+  
Sbjct: 320 YNDDECNQGEPNHSILVVGYGSENGQDYWIVKNSWDDTWGEQGYFRLPRGQNYCFIADEC 379

Query: 305 VYALI 309
            Y ++
Sbjct: 380 SYPVV 384


>gi|237844793|ref|XP_002371694.1| cathepsin L-like thiolproteinase, putative [Toxoplasma gondii ME49]
 gi|50313163|gb|AAT74529.1| toxopain-2 [Toxoplasma gondii]
 gi|89242977|gb|ABD64744.1| cathepsin L [Toxoplasma gondii]
 gi|95007485|emb|CAJ20707.1| toxopain-2 [Toxoplasma gondii RH]
 gi|211969358|gb|EEB04554.1| cathepsin L-like thiolproteinase, putative [Toxoplasma gondii ME49]
 gi|221480879|gb|EEE19300.1| cysteine protease, putative [Toxoplasma gondii GT1]
 gi|221501596|gb|EEE27366.1| cysteine protease, putative [Toxoplasma gondii VEG]
          Length = 422

 Score =  173 bits (439), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 162/309 (52%), Gaps = 20/309 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           Q  Y K Y  +    ++   +++N   IHTHNQ+     + Y+L+ NH  DL    + ++
Sbjct: 121 QAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQG----YSYSLKMNHFGDLSRDEFRRK 176

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHL----DWREKGFITPDWNQEDCGACYAFSIAS 129
                 SR  ++      +    ++P  L    DWR +G +TP  +Q DCG+C+AFS   
Sbjct: 177 YLGFKKSRNLKSHHLGVATELLNVLPSELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTG 236

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++G     T ++  LS Q+++DCS   GN  C+GG + +   YV  +GG+  E+ YPY 
Sbjct: 237 ALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLDSGGICSEDAYPYL 296

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            +   C+ +    VV I  +  +P + E A+K  LA   P++++I A    FQ Y  G++
Sbjct: 297 ARDEECRAQSCEKVVKILGFKDVPRRSEAAMKAALAK-SPVSIAIEADQMPFQFYHEGVF 355

Query: 250 DDEACTSDYVNHAMLLVGY------TRNSWILKNWWSHHWGDNGYMYL---KRGNNRCGI 300
            D +C +D ++H +LLVGY       ++ WI+KN W   WG +GYMY+   K    +CG+
Sbjct: 356 -DASCGTD-LDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGL 413

Query: 301 ANYAVYALI 309
              A + ++
Sbjct: 414 LLDASFPVM 422


>gi|45822205|emb|CAE47499.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 317

 Score =  173 bits (439), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 155/279 (55%), Gaps = 10/279 (3%)

Query: 37  NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESV 96
           N +KI  HN   Q G   + L  N  +D+    +   +      + +R +     ++  +
Sbjct: 43  NLQKIEQHNARYQNGEVSFYLGVNQFADMTSEEFKAMLDSQLIHKPKRDITSRFVADPQL 102

Query: 97  LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSII 156
            +P+ +DWREKG + P  +QE CG+C+AFS A A++GQ F    ++E LS QQ+VDCS  
Sbjct: 103 TVPESIDWREKGAVNPVRDQEQCGSCWAFSAAGALEGQRFLKEGKLEVLSTQQLVDCSRD 162

Query: 157 SGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS-ICKFKRPNIVVDISSWSVLPPQ 215
             N GC GG      +Y++   GL  E  Y Y+G     CK   P I   I+ +S +  Q
Sbjct: 163 YKNEGCNGGWPHWAYDYIK-DNGLCLESKYKYQGYDGYYCKECIPAI-KKINGYSSI-NQ 219

Query: 216 DEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT-SDYVNHAMLLVGY----TR 270
            E ALK  + T GPIAV +NA+   +QLY+ GI + ++C   + +NHA+L VGY     +
Sbjct: 220 TEEALKEAVGTAGPIAVCVNAN-DDWQLYSGGILESQSCPGGESINHAVLAVGYGSENGK 278

Query: 271 NSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           + W++KN W+ +WG+ GY+ + RG N+CGI   A Y L+
Sbjct: 279 DFWLIKNSWNTYWGEEGYLRIVRGKNQCGINEVADYPLL 317


>gi|149030666|gb|EDL85703.1| cathepsin S [Rattus norvegicus]
          Length = 291

 Score =  173 bits (439), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 148/303 (48%), Gaps = 59/303 (19%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K ++K+Y+ +  +  ++L W+ N K I  HN E   G+H Y++  NH+ D+        
Sbjct: 41  KKTHEKEYKDQNEEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDM-------- 92

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
                                                        CG+C+AFS   A++G
Sbjct: 93  -------------------------------------------GSCGSCWAFSAVGALEG 109

Query: 134 QIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
           Q+   T ++  LS Q +VDCS     GN GC GG +     Y+   GG+  E  YPYK  
Sbjct: 110 QLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYIIDNGGIDSEASYPYKAM 169

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C +   N     S +  LP  DE ALK  +AT GP++V I+AS  +F LY SG+YDD
Sbjct: 170 DEKCHYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDASHSSFFLYQSGVYDD 229

Query: 252 EACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVY 306
            +CT + VNH +L+VGY     ++ W++KN W  H+GD GY+ + R N N CGIA+Y  Y
Sbjct: 230 PSCTEN-VNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCSY 288

Query: 307 ALI 309
             I
Sbjct: 289 PEI 291


>gi|170292465|pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin
           L
 gi|170292466|pdb|3BC3|B Chain B, Exploring Inhibitor Binding At The S Subsites Of Cathepsin
           L
 gi|261824911|pdb|3H8C|A Chain A, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors (Compound 14)
 gi|261824912|pdb|3H8C|B Chain B, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors (Compound 14)
          Length = 220

 Score =  173 bits (439), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 128/220 (58%), Gaps = 10/220 (4%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWREKG++TP  NQ  CG+ +AFS   A++GQ+F+ T  +  LS Q +VDCS   G
Sbjct: 2   PRSVDWREKGYVTPVKNQGQCGSXWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG 61

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG +     YVQ  GGL  EE YPY+  +  CK+     V + + +  +P Q E 
Sbjct: 62  NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQ-EK 120

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS------ 272
           AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY   S      
Sbjct: 121 ALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNN 180

Query: 273 --WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
             W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 181 KYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220


>gi|330796919|ref|XP_003286511.1| hypothetical protein DICPUDRAFT_77394 [Dictyostelium purpureum]
 gi|325083492|gb|EGC36943.1| hypothetical protein DICPUDRAFT_77394 [Dictyostelium purpureum]
          Length = 325

 Score =  173 bits (439), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/283 (36%), Positives = 158/283 (55%), Gaps = 14/283 (4%)

Query: 24  KATDSKKKLH-WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRI 82
           +  D KK+   ++ N   I++ N+   Q + G     N  +DL    Y    +    S I
Sbjct: 45  ETLDFKKRYEIFKYNMDFIYSWNKGNSQTILGL----NKYADLSNEEY---KSLFLGSNI 97

Query: 83  R-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSE 141
           + +  +R   S     IP   DWR KG +TP  NQ  C + YAFS   +++        +
Sbjct: 98  KTQNYIRINSSRYD--IPTTFDWRLKGAVTPVKNQGFCNSGYAFSAIGSLESSNKIENGQ 155

Query: 142 IEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV--QFAGGLMKEEDYPYKGKQSICKFKR 199
           +  LS Q ++DCS   GN GC GG++ N+ NY+     G + KE  YPY+ ++S C+FK 
Sbjct: 156 LIRLSEQNLIDCSGSEGNRGCDGGTVVNSFNYLFKHQNGKIPKESSYPYEAQKSKCRFKD 215

Query: 200 PNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYV 259
             I   +++++ L   DE  ++  +AT GP++V+I+AS   FQLY  G+YDD  C++ Y 
Sbjct: 216 QFIGATLNNFANLI-SDESTIQNAVATKGPVSVAIDASSIFFQLYFGGVYDDLFCSNIYT 274

Query: 260 NHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIAN 302
           NH +L+VGYT N WI+KN +   +G +GY+Y+K+G N CGIAN
Sbjct: 275 NHFVLIVGYTENYWIVKNSYGEDYGIDGYIYMKKGKNLCGIAN 317


>gi|313103779|pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A
 gi|313103780|pdb|3KSE|B Chain B, Unreduced Cathepsin L In Complex With Stefin A
 gi|313103781|pdb|3KSE|C Chain C, Unreduced Cathepsin L In Complex With Stefin A
          Length = 220

 Score =  173 bits (438), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 128/220 (58%), Gaps = 10/220 (4%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWREKG++TP  NQ  CG+ +AFS   A++GQ+F+ T  +  LS Q +VDCS   G
Sbjct: 2   PRSVDWREKGYVTPVKNQGQCGSXWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG 61

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG +     YVQ  GGL  EE YPY+  +  CK+     V + + +  +P Q E 
Sbjct: 62  NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPKQ-EK 120

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS------ 272
           AL   +ATVGPI+V+I+A   +F  Y  GIY +  C+S+ ++H +L+VGY   S      
Sbjct: 121 ALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDDN 180

Query: 273 --WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
             W++KN W   WG  GY+ + K   N CGIA+ A Y  +
Sbjct: 181 KYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220


>gi|164472556|gb|ABY58967.1| cathepsin L [Toxoplasma gondii]
          Length = 421

 Score =  173 bits (438), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 162/309 (52%), Gaps = 20/309 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           Q  Y K Y  +    ++   +++N   IHTHNQ+     + Y+L+ NH  DL    + ++
Sbjct: 120 QAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQG----YSYSLKMNHFGDLSRDEFRRK 175

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHL----DWREKGFITPDWNQEDCGACYAFSIAS 129
                 SR  ++      +    ++P  L    DWR +G +TP  +Q DCG+C+AFS   
Sbjct: 176 YLGFKKSRNLKSHHLGVATELLNVLPSELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTG 235

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++G     T ++  LS Q+++DCS   GN  C+GG + +   YV  +GG+  E+ YPY 
Sbjct: 236 ALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLDSGGICSEDAYPYL 295

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            +   C+ +    VV I  +  +P + E A+K  LA   P++++I A    FQ Y  G++
Sbjct: 296 ARDEECRAQSCEKVVKILGFKDVPRRSEAAMKAALAK-SPVSIAIEADQMPFQFYHEGVF 354

Query: 250 DDEACTSDYVNHAMLLVGY------TRNSWILKNWWSHHWGDNGYMYL---KRGNNRCGI 300
            D +C +D ++H +LLVGY       ++ WI+KN W   WG +GYMY+   K    +CG+
Sbjct: 355 -DASCGTD-LDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGL 412

Query: 301 ANYAVYALI 309
              A + ++
Sbjct: 413 LLDASFPVM 421


>gi|118119|sp|P13277.2|CYSP1_HOMAM RecName: Full=Digestive cysteine proteinase 1; Flags: Precursor
 gi|11051|emb|CAA45127.1| cysteine proteinase preproenzyme [Homarus americanus]
 gi|228243|prf||1801240A Cys protease 1
          Length = 322

 Score =  173 bits (438), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 165/309 (53%), Gaps = 21/309 (6%)

Query: 15  KKYKKDYRKKATDSKKKLH----WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY 70
           +++K  + +K  D +++ +    +  N + I   N++ ++G   Y L  N  SD+    +
Sbjct: 21  EEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKF 80

Query: 71  IKEMTRLTH----SRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFS 126
              M         + +  +   +PES E       +DWR KG +TP  +Q  CG+C+AFS
Sbjct: 81  NAVMKGYKKGPRPAAVFTSTDAAPESTE-------VDWRTKGAVTPVKDQGQCGSCWAFS 133

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISG-NLGCAGGSLRNTLNYVQFAGGLMKEED 185
               I+GQ F  T  +  LS QQ+VDC+  S  N GC GG +   + YV+  GG+  E  
Sbjct: 134 TTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESS 193

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPY+ + + C+F    I    + +  +    E ALK     +GPI+V+I+AS  +FQ Y 
Sbjct: 194 YPYEARDNTCRFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYY 253

Query: 246 SGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGI 300
           +G+Y + +C+S  ++HA+L VGY     ++ W++KN W+  WG++GY+ + R  NN CGI
Sbjct: 254 TGVYYEPSCSSSQLDHAVLAVGYGSEGGQDFWLVKNSWATSWGESGYIKMARNRNNNCGI 313

Query: 301 ANYAVYALI 309
           A  A Y  +
Sbjct: 314 ATDACYPTV 322


>gi|66812702|ref|XP_640530.1| counting factor associated protein [Dictyostelium discoideum AX4]
 gi|74897159|sp|Q54TR1.1|CFAD_DICDI RecName: Full=Counting factor associated protein D; Flags:
           Precursor
 gi|60468561|gb|EAL66564.1| counting factor associated protein [Dictyostelium discoideum AX4]
          Length = 531

 Score =  173 bits (438), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 170/307 (55%), Gaps = 20/307 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + +Y K+Y  +    ++ +++++  K I THN +       Y L  NH +DL      KE
Sbjct: 229 KAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESS----YKLGMNHYADLSN----KE 280

Query: 74  MTRLTHSRIRRTLVRSPES---NESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
              L   ++ R  V   +S   +ES+  IP  +DWR +  +TP  +Q  CG+C+ F    
Sbjct: 281 FNTLVKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTG 340

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           +++G    +  E+  LS QQ+VDC+I++G+ GC GG   +   YV   G L  E +YPY 
Sbjct: 341 SLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYL 400

Query: 190 GKQSICKFKRPNIV-VDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            +  +C+ +      V I+ +  +    E AL+  +AT GP+A++I+AS   F+ Y SG+
Sbjct: 401 MQNGLCRDRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGV 460

Query: 249 YDDEACTS--DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           Y++ AC +  D ++H +L +GY     ++ +++KN WS +WG +GY+Y+ R  NN CG++
Sbjct: 461 YNNPACKNGLDDLDHEVLAIGYGTYQGQDYFLVKNSWSTNWGMDGYVYMARNDNNLCGVS 520

Query: 302 NYAVYAL 308
           + A Y +
Sbjct: 521 SQATYPI 527


>gi|428186189|gb|EKX55040.1| hypothetical protein GUITHDRAFT_63227 [Guillardia theta CCMP2712]
          Length = 344

 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 147/291 (50%), Gaps = 16/291 (5%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSP--- 90
           +Q N   I  HN+E  QGL  Y +  N  + L    +  +      + + +   R     
Sbjct: 55  FQKNLDMIMKHNEEYNQGLQSYEMGLNGFAHLTFEEFSAQYLGYGGAEVEQPKTRRAGKH 114

Query: 91  ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQV 150
           E      IP  +DWREKG +    NQ  CG+C+AFS  +A++G  F ++ E+  LS QQ+
Sbjct: 115 ERKSRSEIPASVDWREKGAVAEVKNQGACGSCWAFSAVAALEGAHFLNSGELISLSEQQL 174

Query: 151 VDCSIISGNLGCAGGSLRNTLNY-VQFAG-GLMKEEDYPYKGKQSICKFKRPNIVVDISS 208
           VDCS   GN GCAGG + N   Y +   G G   E+DYPYKG    CKF    +   IS 
Sbjct: 175 VDCSKKFGNHGCAGGYMDNAFEYWMNNTGHGDDSEKDYPYKGMDGKCKFSADGVRATISG 234

Query: 209 WSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS-DYVNHAMLLVG 267
           ++ +   +E  L   +A VGP++V+I+A     Q Y  G+++  A T    +NH +  VG
Sbjct: 235 YNDVKQGNETDLLDAVANVGPVSVAIHAGA-ALQFYLRGVFNGVAGTCFGPLNHGVTAVG 293

Query: 268 YTRNS---------WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           Y   S         WI+KN W   WG+ G++   RG N CG+AN A Y L+
Sbjct: 294 YGTASLRFGRKMDYWIIKNSWGMGWGEKGFVRFARGKNLCGVANGASYPLV 344


>gi|195123219|ref|XP_002006105.1| GI20850 [Drosophila mojavensis]
 gi|193911173|gb|EDW10040.1| GI20850 [Drosophila mojavensis]
          Length = 329

 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 164/302 (54%), Gaps = 13/302 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM- 74
           +Y K Y  +  +  +KL +  N ++I  HNQ  +  +  Y +  N  +D+  + +   M 
Sbjct: 33  EYDKVYESEEEELLRKLIFIDNKRQIDRHNQRYRLNMESYEMGVNQFTDMLDKEFESLML 92

Query: 75  TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
           + +  +     L+ +P+  E+  +P  +DWR +G +TP  NQ  CGAC++F+    ++G 
Sbjct: 93  SSMNTTESDADLLYTPD--EAYALPADIDWRNRGAVTPVKNQGKCGACWSFAATGTLEGM 150

Query: 135 IFKSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
            F  T ++  LS Q +VDCS I   N GC GG     L YV+  GG+  E  Y Y+ KQ 
Sbjct: 151 HFLKTGKLVSLSEQNLVDCSTIRYFNRGCNGGMPFRALKYVRDNGGIDTEYSYTYEAKQL 210

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C++   +I   ++    +   + H L V +A+ GPI+V I+AS + F+ Y  G+ +D  
Sbjct: 211 SCRYDPLHIGAQVTDVVRVAAGEPH-LAVAVASKGPISVGIHAS-NNFRNYRDGVLNDRQ 268

Query: 254 CTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
           C     NHA+L+VG+ R+      W++KN W   WGD GY+ + R  +N+CGIA+ AVY 
Sbjct: 269 CNK-AANHAVLVVGFGRDPQGGDFWLVKNSWGASWGDGGYIRMSRNRSNQCGIASNAVYP 327

Query: 308 LI 309
           L+
Sbjct: 328 LV 329


>gi|195154194|ref|XP_002018007.1| GL17477 [Drosophila persimilis]
 gi|198460088|ref|XP_002138780.1| GA24205 [Drosophila pseudoobscura pseudoobscura]
 gi|194113803|gb|EDW35846.1| GL17477 [Drosophila persimilis]
 gi|198136897|gb|EDY69338.1| GA24205 [Drosophila pseudoobscura pseudoobscura]
          Length = 353

 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 163/314 (51%), Gaps = 36/314 (11%)

Query: 18  KKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL 77
           ++ YR+    +KK L        I   N+ A  G  GY L  N L+DL      KE+  L
Sbjct: 54  ERAYRESIFAAKKSL--------IDLSNKNADGGFSGYRLYLNPLADLTK----KEIATL 101

Query: 78  THSRIRRT----------LVRSPESNESVLIPDHLDWREKGFITPDWNQE-DCGACYAFS 126
             S++  +           V +P      L P+  DWREKG +TP   Q   CG+C++F+
Sbjct: 102 LGSKVSESGEKYTNGHINFVTAPNPASGNL-PESFDWREKGGVTPPGFQGMGCGSCWSFA 160

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
              A++G +F+ T  +  LS Q +VDC+   GN+GC GG       Y++   G+     Y
Sbjct: 161 TTGALEGHLFRRTGVLASLSQQNLVDCADDYGNMGCDGGFQEYGFEYIR-DHGITLANKY 219

Query: 187 PYKGKQSICK----FKRP--NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
           PY   +  C+      +P    +V I  ++ + P DE  +K  +AT+GP+A S+NA+P +
Sbjct: 220 PYTQFEMQCRQNETAGQPPRESIVKIRDYATITPGDEQKMKEVVATLGPLACSMNAAPIS 279

Query: 241 FQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYM-YLKRGN 295
           F+ Y  GIY DE C  D VNH++++VGY     ++ WI+KN +S +WG+ G+M  L+   
Sbjct: 280 FEQYQGGIYADEECNQDEVNHSVVVVGYGSEGGQDYWIIKNSYSQNWGEGGFMRILRNAG 339

Query: 296 NRCGIANYAVYALI 309
             CGIA+   Y ++
Sbjct: 340 GFCGIASECSYPIL 353


>gi|242020372|ref|XP_002430629.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
 gi|212515801|gb|EEB17891.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
          Length = 346

 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 165/329 (50%), Gaps = 34/329 (10%)

Query: 4   KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
           KEW +     + +Y K Y+    +  +   +  N  +I  HN +  +G   Y + EN  S
Sbjct: 29  KEWDLF----KAQYGKSYKTPEEEYYRMRIYMDNKLEIVEHNLKFLEGKVSYEMGENQFS 84

Query: 64  DLHPRHYIKEMTRL--THSRIRRTLVRSPE--------------SNESVLIPDHLDWREK 107
           D+       E+  L   +++I R   +  E               NE V  PD+++W E 
Sbjct: 85  DMTS----DEVNDLYNGYNKINRMNAKPGEIPALPEMDGVPFVAKNEDV--PDYVNWVEA 138

Query: 108 GFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSL 167
           G +TP  +Q  CG+CYAF+  + ++ ++        +LS+Q V+DCS   GN GC GG  
Sbjct: 139 GAVTPIRDQGACGSCYAFASLATLESRLMIYNKTELQLSVQNVLDCSGEFGNFGCDGGLA 198

Query: 168 RNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATV 227
           RN   YV    G+  E DYPY+ ++  C+F        I  +  +   DE ALK  +AT 
Sbjct: 199 RNVYEYVMDNEGVNNETDYPYEVREGKCRFSSKKFTAKIKDYVSVSYFDEDALKAAVAT- 257

Query: 228 GPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY------TRNSWILKNWWSH 281
           GP++VS++AS   F+ Y  G+Y D+ C+S  +NHA++ VGY       ++ W+++N W  
Sbjct: 258 GPVSVSMDASSPAFKKYKGGVYTDDKCSSMKLNHAVVAVGYGTDPDTKQDYWLVRNSWGT 317

Query: 282 HWGDNGYMYLKR-GNNRCGIANYAVYALI 309
            WG+ GY  + R  +N CG+A   V+  +
Sbjct: 318 AWGERGYFKIARNADNMCGLATRPVFPTL 346


>gi|74917819|sp|Q6YD92.1|SILIC_PETFI RecName: Full=Silicatein; Flags: Precursor
 gi|37724090|gb|AAO23671.1| silicatein [Petrosia ficiformis]
          Length = 339

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 157/307 (51%), Gaps = 20/307 (6%)

Query: 21  YRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT-- 78
           Y  +  + ++ + WQ N + I  HN+  +Q   GYTL  N   D+    + + M  +   
Sbjct: 35  YESEHEERRRHVVWQQNQEYIDQHNKYKEQ--FGYTLEMNKFGDMSNAEFAELMMCVQDY 92

Query: 79  --HSRIRRTL---------VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
             H  +  +L         VR  ++  +V +P+ +DWR  G +T   +Q  CG  YAF+ 
Sbjct: 93  NHHGNLTESLLADNKFKGRVREYQAPATVSLPETVDWRTGGAVTHVKDQLRCGCSYAFAA 152

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
             A++G    +      LS Q V+DCS+  GN GC+   + N   YV   GGL     YP
Sbjct: 153 VGALEGAAALARGRTASLSEQNVLDCSVPYGNHGCSCEDVNNAFMYVIDNGGLDTTSSYP 212

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y  +Q  CKFK   +    +    +   DE +L+  LAT GP+AV I+AS  +FQ Y  G
Sbjct: 213 YVSRQYYCKFKSSGVGATATGIVTISSGDESSLESALATAGPVAVYIDASHSSFQFYKYG 272

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           + +   C+   ++HAM+L+GY   S    W+LKN W  +WG +GY+ + RG +N+CGIA 
Sbjct: 273 VLNVPNCSRSKLSHAMILIGYGTTSSKKYWLLKNSWGPNWGISGYIKMSRGMSNQCGIAT 332

Query: 303 YAVYALI 309
           YA +  +
Sbjct: 333 YASFPTL 339


>gi|377823949|gb|AFB77219.1| cathepsin L1 [Fasciola gigantica]
          Length = 326

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 153/310 (49%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGADDEHRRNIWEENVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMPRASDILSHG--------IPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN GC GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNYGCMGGLMENAYEYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++ R   V  ++ +  +    E  LK  +   GP AV+++     F +Y
Sbjct: 194 SYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELKNLVGAEGPAAVAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
             GIY  + C+   VNHA+L VGY        WI+KN W   WG+ GY+ + R   N CG
Sbjct: 253 RGGIYQSQTCSPLGVNHAVLAVGYGTQGGTDYWIVKNSWGSSWGERGYIRMVRNRGNMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASLPMV 322


>gi|410990006|ref|XP_004001241.1| PREDICTED: cathepsin L1-like [Felis catus]
          Length = 328

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 150/289 (51%), Gaps = 16/289 (5%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           ++  WQ N K I  HN+E  QG H + +  N   D+    +   M  L   +     V  
Sbjct: 47  RRAVWQKNMKMIMQHNREYLQGKHSFLMAMNGFGDMTNEEFRHMMIGLKIQKNENGTVFK 106

Query: 90  PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
                 + +P  ++ R+    TPD +   C + +AFS A AI+GQIF+   +   LS+Q 
Sbjct: 107 VPFPAGISLP--MNRRQ----TPDISLGRCASGWAFSAAGAIEGQIFRKYGKRVSLSVQN 160

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW 209
           ++DCS   GN GC GG + N   YV+   GL  EE YPY  +   CK++      +++++
Sbjct: 161 LLDCSQAEGNEGCNGGLMSNAFQYVRNNRGLDTEESYPYVARDGPCKYRPEYSAANVTAF 220

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY- 268
             +P ++E AL V +  +G I+ +I+AS  TF+ Y  GIY D  C+S+ +NH +L+VGY 
Sbjct: 221 QTIPRREE-ALLVAMKNMGSISAAIDASLDTFRFYKGGIYYDPKCSSEDLNHGVLVVGYG 279

Query: 269 -------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
                   +  W +KN W   WG  GY+ + R  NN CGIA  A + ++
Sbjct: 280 FQGKESDNQKYWFVKNSWGTDWGMGGYIKMARERNNNCGIATRASFPIV 328


>gi|194755357|ref|XP_001959958.1| GF13132 [Drosophila ananassae]
 gi|190621256|gb|EDV36780.1| GF13132 [Drosophila ananassae]
          Length = 392

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 10/300 (3%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT--- 75
           K Y   A    ++  + ++   +   N     G   + L  N  SDL    ++ ++T   
Sbjct: 94  KTYASAAEQQLRETAFSASKSLVDAGNAAFASGASTFKLAVNAFSDLTHSEFLSQLTGRK 153

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           R +    +    + P S  +  +P+  DWR+ G +TP  NQ  CG+C+AF+    I+G I
Sbjct: 154 RSSQGDAQAAASKQPPSVPAGAVPESFDWRQHGAVTPVKNQGTCGSCWAFATTGTIEGHI 213

Query: 136 FKSTSEIEELSIQQVVDCSIISGNL-GCAGGSLRNTLNYV-QFAGGLMKEEDYPYKGKQS 193
            ++T  +  LS Q +VDC      L GC GG     + ++ +   G+   E Y Y  KQ 
Sbjct: 214 ARATGNLPVLSEQNLVDCGPQEFALVGCDGGYQGYAMAFIHENQKGVSNSESYAYLDKQD 273

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            CK+        I  W+ +P  DE  LK  + T+GP+A S+  +  T   Y SGIY DE 
Sbjct: 274 TCKYNPSTSAAQIKGWAEIPVGDEELLKKVVGTLGPVACSLYGT-ETLLNYDSGIYSDEQ 332

Query: 254 CTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           C  +  NH++L+VGY     ++ WI+KN WS  WG++GY  L RG N C IA    Y ++
Sbjct: 333 CNGEDPNHSVLVVGYGSENGQDYWIVKNSWSAAWGEDGYFRLVRGKNFCNIAAECAYPVV 392


>gi|8547325|gb|AAF76330.1|AF271385_1 cathepsin L [Fasciola hepatica]
          Length = 326

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 155/310 (50%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y     D ++ + W+ N K I  HN     GL  Y L  N  +D+        
Sbjct: 25  KRIYNKEYNGADDDHRRNI-WEQNVKHIQEHNLRHDLGLVTYKLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P       +PD +DWRE G++T   +Q  CG+C+AF
Sbjct: 84  YLTEMPRASELLSHG--------IPYKANKRAVPDRIDWRESGYVTEVKDQGGCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           S   A++GQ  K+       S QQ+VDCS   GN GC GG + N   Y++   GL  E  
Sbjct: 136 STTGAMEGQYMKNQRTSISFSEQQLVDCSRDFGNYGCNGGLMENAYEYLKRF-GLETESS 194

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPY+  +  C++     V  ++ +  +   DE  L+  +   GP AV+++     F +Y 
Sbjct: 195 YPYRAVEGQCRYNEQLGVAKVTGYYTVHSGDEVELQNLVGAEGPAAVALDVESD-FMMYR 253

Query: 246 SGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGY--MYLKRGNNRCG 299
           SGIY  + C+ D +NH +L VGY      + WI+KN W   WG++GY  M  KRG N CG
Sbjct: 254 SGIYQSQTCSPDRLNHGVLAVGYGIQDGTDYWIVKNSWGTWWGEDGYIRMVRKRG-NMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASVPMV 322


>gi|301628647|ref|XP_002943461.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 334

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/302 (36%), Positives = 165/302 (54%), Gaps = 9/302 (2%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           K ++K Y+    +  ++  W+   K I  HN E   GLH Y +  NHL D+        M
Sbjct: 35  KTHQKSYKDWEEERARRTIWEETLKFITAHNLEYSLGLHTYEVGMNHLGDMTGEEVAATM 94

Query: 75  TRLTHSRIR-RTLVRSPESNESVLIPDHLDWREKGFITPDWNQE-DCGACYAFSIASAIQ 132
           T  T S      +V  P+     L P  +DWR KG +TP  NQ   CG+CYAFS   A++
Sbjct: 95  TGYTDSGDSLDNVVHVPKQILEALPPASIDWRTKGCVTPVRNQGLFCGSCYAFSAVGALE 154

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
            Q  K T  +   S Q++VDCS   GN GC GGSL  +  Y++   G+M++  Y Y  K+
Sbjct: 155 CQWKKKTRSLVTFSPQELVDCSDSEGNNGCKGGSLNASFTYMK-KNGVMEDSAYKYTEKK 213

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             CK K+P+    +  +  L   +E ALK  +   GP++V I++S   F++Y SG+Y D 
Sbjct: 214 EPCKKKKPSNTGVVKQFYRLHAGNETALKKAVGIDGPVSVVIDSSCPGFRMYNSGVYYDP 273

Query: 253 ACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYA 307
            CT++ ++H++L+VGY  ++    W++KN W   WG+ GY+ + R  NN CGIA+YA Y 
Sbjct: 274 YCTTN-LDHSVLVVGYGTDNGNDYWLIKNSWGIGWGEKGYVKMARNRNNHCGIASYAYYL 332

Query: 308 LI 309
            +
Sbjct: 333 TV 334


>gi|195379514|ref|XP_002048523.1| GJ11310 [Drosophila virilis]
 gi|194155681|gb|EDW70865.1| GJ11310 [Drosophila virilis]
          Length = 328

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/299 (36%), Positives = 157/299 (52%), Gaps = 17/299 (5%)

Query: 22  RKKATDSKKKLH---WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI-KEMTRL 77
           R  A DS++ L    ++ N K I THN   + G   Y +  N  +DL P  ++ + M  L
Sbjct: 36  RSYAGDSEELLRRRIFEDNKKLIDTHNARYEAGKETYKMGVNEFTDLLPSEFVSRMMGSL 95

Query: 78  THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFK 137
             + +    +  P +N  + IP+ +DWR KG ++P  NQ  CG+C+ F+    ++GQ F 
Sbjct: 96  NRTAVTADYIYEPSAN--LQIPESIDWRTKGAVSPVKNQGTCGSCWTFAAVGTLEGQSFL 153

Query: 138 STSEIEELSIQQVVDCSIISG--NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
            T  + ELS Q ++DCS      N GC  G   + L YV+   GL     YPY+G Q  C
Sbjct: 154 RTKRMVELSEQNLLDCSSHPPYRNHGCQRGYPYDALRYVKDNQGLDTRSSYPYQGVQGRC 213

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           +F++ ++ V I   + +   DE AL+  +A  GPIAV I+      Q Y SGIY +  C 
Sbjct: 214 RFRKEHVGVRIKGVATVRSGDERALQAAVAEKGPIAVGIDV--QHLQHYHSGIY-NRPCF 270

Query: 256 SDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
                HA++LVGY R+     W+LKN W  +WG+ GY  + R + N C IAN AVY L 
Sbjct: 271 GPAFLHAVVLVGYGRDRGHDYWLLKNSWG-NWGEAGYFRMARNSRNLCYIANDAVYPLF 328


>gi|545734|gb|AAB30089.1| cysteine protease [Fasciola sp.]
 gi|2662308|dbj|BAA23743.1| cathepsin L [Fasciola hepatica]
          Length = 325

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 152/309 (49%), Gaps = 25/309 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N L+D+        
Sbjct: 25  KRMYNKEY-NGAVDEHRRNIWEENVKHIQEHNLRHDLGLVTYTLGLNQLTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMPRASDILSHG--------IPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN GC GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNYGCMGGLMENAYEYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++ R   V  ++ +  +    E  LK  +   GP AV+++     F +Y
Sbjct: 194 SYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELKNLVGAEGPAAVAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGI 300
           + GIY    C+S  VNHA+L VGY        WI+KN W   WG+     ++   N CGI
Sbjct: 253 SGGIYQSRTCSSLRVNHAVLAVGYGTQGGTDYWIVKNSWGSSWGERYIRMVRNRGNMCGI 312

Query: 301 ANYAVYALI 309
           A+ A   ++
Sbjct: 313 ASLASLPMV 321


>gi|74765984|sp|Q24940.1|CATLL_FASHE RecName: Full=Cathepsin L-like proteinase; Flags: Precursor
 gi|497700|gb|AAA29136.1| cathepsin [Fasciola hepatica]
          Length = 326

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 156/310 (50%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM+R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMSRASDILSHG--------VPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN GC+GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++ +   V  ++ +  +    E  LK  +    P AV+++     F +Y
Sbjct: 194 SYPYTAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
            SGIY  + C+   VNHA+L VGY        WI+KN W  +WG+ GY+ + R   N CG
Sbjct: 253 RSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRGNMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASLPMV 322


>gi|40060518|gb|AAR37420.1| papain-like cysteine proteinase [Trichomonas vaginalis]
          Length = 284

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 152/278 (54%), Gaps = 18/278 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W SN + +  HN+       G+T+  N L+ L P  Y      L   R+ +   ++  SN
Sbjct: 14  WLSNKRLVQEHNRAN----LGFTVALNKLAHLTPAEY----RSLLGFRMSKKQFKATASN 65

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
              +  D  DWR++G + P  NQ  CG+C+AFS   A + Q   +  +++ LS Q +VDC
Sbjct: 66  --AVAADSCDWRQQGKVNPVKNQGQCGSCWAFSTVQAQESQYAIAHGQLQSLSEQNLVDC 123

Query: 154 SIISGNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVL 212
             ++   GC GG +    +YV +  G  M E+DYPY  +   CKF       +++S+  +
Sbjct: 124 --VTECYGCNGGLMTAAYDYVIRPQGKFMLEDDYPYTARDGSCKFDSKKGTSNVASYVTV 181

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY---- 268
              DE  L   ++T+GP A++I+AS  +FQLY+SGIYD+ AC+S  ++H +  VGY    
Sbjct: 182 NEGDEKDLAKKVSTLGPAAIAIDASAWSFQLYSSGIYDESACSSVNLDHGVGCVGYGTEG 241

Query: 269 TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAV 305
           ++N WI++N W   WG+ GY+  +K  NN+CG A  A 
Sbjct: 242 SKNYWIVRNSWGESWGEKGYIRMIKDKNNQCGEATMAC 279


>gi|379991182|emb|CCA61803.1| cathepsin protein CatL1-MM3p, partial [Fasciola hepatica]
          Length = 326

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 157/306 (51%), Gaps = 18/306 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y     D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEYNGD-DDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+R   S I    V    +N +V  PD +DWRE G++T   +Q +CG+C+AFS   
Sbjct: 84  YLTEMSRA--SDILSHGVPYEANNRAV--PDKIDWRESGYVTEVKDQGNCGSCWAFSTTG 139

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPY 188
            ++GQ  K+       S QQ+VDCS   GN GC+GG + N   Y+ QF  GL  E  YPY
Sbjct: 140 TMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQF--GLETESSYPY 197

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
              +  C++ +   V  ++ +  +    E  LK  +   GP AV+++     F +Y+ GI
Sbjct: 198 TAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGAEGPAAVAVDVESD-FMMYSGGI 256

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           Y  + C+   +NHA+L VGY        WI+KN W  +WG+ GY+ + R   N CGIA+ 
Sbjct: 257 YQSQTCSPLGLNHAVLAVGYGTQGGTDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASL 316

Query: 304 AVYALI 309
           A   ++
Sbjct: 317 ASLPMV 322


>gi|123391522|ref|XP_001300085.1| Clan CA, family C1, cathepsin L or K-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121881065|gb|EAX87155.1| Clan CA, family C1, cathepsin L or K-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 285

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 151/279 (54%), Gaps = 19/279 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W SN + +  HN+       G+T+  N L+ L P  Y      L   R+ +   ++  SN
Sbjct: 14  WLSNKRLVQEHNRAN----LGFTVALNKLAHLTPAEY----RSLLGFRMSKKQFKATASN 65

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
              +  D  DWR++G + P  NQ  CG+C+AFS   A + Q   +  +++ LS Q +VDC
Sbjct: 66  --AVAADSCDWRQQGKVNPVKNQGQCGSCWAFSTVQAQESQYAIAHGQLQSLSEQNLVDC 123

Query: 154 SIISGNLGCAGGSLRNTLNYV--QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
             ++   GC GG +    +YV     G  M E+DYPY  +   CKF       +++S+  
Sbjct: 124 --VTECYGCNGGLMTAAYDYVIRNQKGKFMLEDDYPYTARDGSCKFDSKKGTSNVASYVT 181

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--- 268
           +   DE  L   ++T+GP A++I+AS  +FQLY+SGIYD+ AC+S  ++H +  VGY   
Sbjct: 182 VNEGDEKDLAKKVSTLGPAAIAIDASAWSFQLYSSGIYDESACSSVNLDHGVGCVGYGTQ 241

Query: 269 -TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAV 305
            ++N WI++N W   WG+ GY+  +K  NN+CG A  A 
Sbjct: 242 GSKNYWIVRNSWGESWGEKGYIRMIKDKNNQCGEATMAC 280


>gi|473159|emb|CAA83538.1| cathepsin L [Schistosoma mansoni]
          Length = 317

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/308 (36%), Positives = 166/308 (53%), Gaps = 19/308 (6%)

Query: 15  KKYKKDYRKKATDS---KKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           K++K  Y K  +DS   ++K  +    +KI  HN     GL GYT+  N   D+      
Sbjct: 16  KQWKLKYNKTYSDSNEIRRKAIFMRYVEKIQQHNLRHDLGLEGYTMGLNQFCDMD----W 71

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLI-----PDHLDWREKGFITPDWNQEDCGACYAFS 126
           +E+  +  S++        +  E + +     P   DWR+ G +TP  NQ  CG+C+AFS
Sbjct: 72  EEIKTIMLSKVFGNSPLWDDKKEELELSNDPLPSKWDWRDHGAVTPVKNQGLCGSCWAFS 131

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
            A A++GQ+ K   ++  LS QQ+VDCS   GN GC GG++  +  Y++    +  E+DY
Sbjct: 132 AAGAVEGQLVKKHKKLISLSEQQLVDCSYKYGNDGCQGGTMDQSFAYLE-KYPIESEKDY 190

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
            Y G  S C F++   VV +  +  LP +DE  L+  L   GPI+V+I+A      LY S
Sbjct: 191 KYIGHDSSCHFRKSKGVVKVKKFVDLPARDEEKLQKALYHYGPISVAIDALDDLI-LYKS 249

Query: 247 GIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIA 301
           GIY+ + C+S  +NH +L VGY R +    W++KN W   WG NGY  L+R  +N CGIA
Sbjct: 250 GIYESKQCSSFLLNHGVLAVGYGRENRKDYWLIKNSWGTTWGMNGYFKLRRNKHNMCGIA 309

Query: 302 NYAVYALI 309
             A + L+
Sbjct: 310 TNASFPLL 317


>gi|339252572|ref|XP_003371509.1| cathepsin L1 [Trichinella spiralis]
 gi|316968239|gb|EFV52542.1| cathepsin L1 [Trichinella spiralis]
          Length = 448

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 173/338 (51%), Gaps = 48/338 (14%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y  ++ ++ ++  + +N  K+  HN++   G   Y+++ N  SDL    +++ M    
Sbjct: 112 KTYANESEENYRREVFYANRLKVIRHNEQFDGGAKSYSMKLNKYSDLTHGEFVQLMNGFK 171

Query: 79  ----HSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS----- 129
                   R + V  P      L P ++DWR +G +TP  +Q  CG+C+AFS  +     
Sbjct: 172 IASKSGDYRPSSVFKPLLFTGDL-PLNVDWRSEGMVTPVKDQGHCGSCWAFSAVNSNALH 230

Query: 130 ----------AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGG 179
                     A++GQ  + T ++  LS Q ++DCS   GN GC+GG + N   YV+   G
Sbjct: 231 VHSRAFQQTGALEGQNKRKTGKLVSLSEQNLIDCSRKYGNKGCSGGLMDNAFEYVKENHG 290

Query: 180 LMKEEDYPYKGKQSI----CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSIN 235
           +  EE YPY+    +    C+FK   I      +  + P +E  L   +AT+GP++V+I+
Sbjct: 291 IDTEESYPYEAAVRMLDKKCRFKNSTIGATDKGFVDIEPGNETYLMHAVATIGPLSVAID 350

Query: 236 ASPHTFQLYAS-------------------GIYDDEACTSDYVNHAMLLVGY----TRNS 272
           AS  +FQ Y+S                   G+Y +  C+S +++H +L+VGY     ++ 
Sbjct: 351 ASHESFQFYSSGMLLMVDIFNTVEVMWTNLGVYFEPMCSSQFLDHGVLVVGYGSLKGKDY 410

Query: 273 WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           WI+KN W   WG++GY+++ R  NN CGIA++A Y +I
Sbjct: 411 WIVKNSWGTSWGNDGYIFMARNKNNSCGIASFASYPII 448


>gi|91092016|ref|XP_970773.1| PREDICTED: similar to cathepsin-L-like midgut cysteine proteinase
           [Tribolium castaneum]
 gi|270001248|gb|EEZ97695.1| cathepsin L precursor [Tribolium castaneum]
          Length = 314

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 155/301 (51%), Gaps = 14/301 (4%)

Query: 17  YKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR 76
           +KK+Y  K  + K+   +  N  KI  HN + + G   Y    N   DL    ++  + R
Sbjct: 20  HKKEYSTKTEEMKRLAIFTENLSKIDAHNTKYRNGEVTYFKAMNKFGDLTTDEFLAFVNR 79

Query: 77  LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
              ++  +    +  +   +     +DWR  G ++   N++DC + ++FS   A++GQ+ 
Sbjct: 80  NKLTKREKNEKHTKLNTTKIEYETQVDWRANGLVSDVKNEQDCSSSWSFSALGAVEGQLA 139

Query: 137 KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPYKGKQSIC 195
             T+++  LS Q ++DCS    + GC GG   N  +Y+ QF  G+M E+DYPY+GK  +C
Sbjct: 140 LKTNQLTSLSAQNLIDCS---ADFGCNGGHATNAYSYISQF--GIMPEKDYPYEGKAGVC 194

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           +F     +  ++ +  + P DE AL+  LA +GPIA +I A+    Q Y  GI  DE C 
Sbjct: 195 RFDASKSITTVTGFYDIDPNDETALQGALAMMGPIAATIEATEE-LQFYKGGILLDEKCN 253

Query: 256 SDY--VNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYAL 308
           S    +NH +L+VGY   +    WI+KN W   WG+ GY    R   N CGIA+ A   +
Sbjct: 254 SKVPDLNHGVLVVGYGSENGGDFWIVKNSWGSDWGEGGYYRPVRNHGNNCGIASSATLPI 313

Query: 309 I 309
           +
Sbjct: 314 L 314


>gi|320543907|ref|NP_001188921.1| cysteine proteinase-1, isoform D [Drosophila melanogaster]
 gi|318068589|gb|ADV37168.1| cysteine proteinase-1, isoform D [Drosophila melanogaster]
          Length = 249

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 130/220 (59%), Gaps = 6/220 (2%)

Query: 96  VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSI 155
           V +P  +DWR KG +T   +Q  CG+C+AFS   A++GQ F+ +  +  LS Q +VDCS 
Sbjct: 30  VTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCST 89

Query: 156 ISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQ 215
             GN GC GG + N   Y++  GG+  E+ YPY+     C F +  +      ++ +P  
Sbjct: 90  KYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQG 149

Query: 216 DEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS--- 272
           DE  +   +ATVGP++V+I+AS  +FQ Y+ G+Y++  C +  ++H +L+VG+  +    
Sbjct: 150 DEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGE 209

Query: 273 --WILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAVYALI 309
             W++KN W   WGD G++  L+   N+CGIA+ + Y L+
Sbjct: 210 DYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 249


>gi|158263969|gb|ABW24657.1| cathepsin L [Fasciola hepatica]
          Length = 326

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 158/306 (51%), Gaps = 18/306 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLH-WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPR 68
           ++ Y K+Y     D + +L+ W+ N K I  HN    +GL  Y L  N  +DL       
Sbjct: 25  KRMYNKEY--NGADDEHRLNIWEQNVKHIEEHNLRHDRGLVTYKLGLNQFTDLTFEEFKA 82

Query: 69  HYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
            Y+ EM+ ++ S +   +    E N+   +P  +DWR+ G++T   +Q  CG+C+AFS  
Sbjct: 83  KYLMEMSPVSES-LSDGISYEAEGND---VPASIDWRQYGYVTEVKDQGQCGSCWAFSAV 138

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            AI+GQ  K        S QQ+VDC+   GN GC+GG + N   Y++   GL     YPY
Sbjct: 139 GAIEGQYVKKFRNRMLFSEQQLVDCTKRFGNHGCSGGWMENAYRYLK-DSGLETASYYPY 197

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +  +  C+++R   V  ++    +   DE  L   +   GP AV+++A    F +Y SGI
Sbjct: 198 QAWEYQCQYRRELGVAKVTGAYTVHSGDEMRLMQMVGREGPAAVAVDAQS-DFYMYQSGI 256

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           +  + CTS  V HA+L VGY   S    WILKN W   WG++GYM   R  NN C IA+ 
Sbjct: 257 FQSQTCTSQRVTHAVLAVGYGTESGTDYWILKNSWGKWWGEDGYMRFARNRNNMCAIASV 316

Query: 304 AVYALI 309
           A   ++
Sbjct: 317 ASVPMV 322


>gi|114796866|gb|ABI79445.1| cysteine proteinase 5 [Entamoeba histolytica]
          Length = 289

 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 141/242 (58%), Gaps = 17/242 (7%)

Query: 74  MTRLTHSRIRRTLVRSPESNESVL-----IPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           MT   ++ + +  V   +  E V      +P+ +DWR KG +    +Q  CG+CY+F+  
Sbjct: 50  MTEAEYNSMLKPFVIDKQHEEIVYDSRGDVPESVDWRAKGKVPAIRDQASCGSCYSFASV 109

Query: 129 SAIQGQIF-----KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKE 183
           +AI+G++      K T +  +LS QQ+VDCS+  GN GC GGSL  +  YV+   G+M+E
Sbjct: 110 AAIEGRLLVAGSKKFTVDDLDLSEQQLVDCSVSVGNKGCNGGSLLLSFRYVKL-NGIMQE 168

Query: 184 EDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
           +DYPY   +  C + +  + V I+   ++ P  E AL +  A  GP+  +I+AS   FQL
Sbjct: 169 KDYPYVAAEETCTYDKKKVAVKITGQKLVRPGSEKAL-MRAAAEGPVGAAIDASGVKFQL 227

Query: 244 YASGIYDDEACTSDYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRG-NNRC 298
           Y SGIY+ + C+S  +NH + +VGY T+N    WI++N W   WGD GY+ + R  NN+C
Sbjct: 228 YKSGIYNSKECSSTQLNHGVAVVGYGTQNGTEYWIVRNSWGTIWGDQGYVLMSRNKNNQC 287

Query: 299 GI 300
           GI
Sbjct: 288 GI 289


>gi|167427529|gb|ABZ80401.1| cathepsin L4, partial [Fasciola hepatica]
          Length = 303

 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 154/309 (49%), Gaps = 24/309 (7%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL-------- 65
           ++ Y K+Y     D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 2   KRMYNKEY-NGVDDVHRRNIWEENVKHIQEHNIRHDLGLVTYTLGLNQFTDMTFEEFKAK 60

Query: 66  HPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           H R   +    L+H          P       +P+ +DWRE G++T   +Q DCG+C+AF
Sbjct: 61  HLREIPRASDMLSHG--------IPYEANDRAVPESIDWREFGYVTEVKDQGDCGSCWAF 112

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           S   A++GQ  K+       S QQ+VDCS   GN GC GG + N   Y++   GL  E  
Sbjct: 113 STTGAVEGQYMKNPKANISFSEQQLVDCSGDYGNHGCNGGFMENAYEYLERR-GLETESS 171

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPYK ++  CK+     VV++  + +     E  L   +   GP AV+++     F +Y 
Sbjct: 172 YPYKAEEGPCKYDSRLGVVEVFGYFIEHSGIESKLAHLVGDKGPAAVAVDVES-DFLMYR 230

Query: 246 SGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGI 300
            GIY    C+S+ +NHAML+VGY        WI+KN W   WGD+GY+ + R  +N CGI
Sbjct: 231 GGIYASRNCSSEKLNHAMLVVGYGTQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCGI 290

Query: 301 ANYAVYALI 309
           A+ A   ++
Sbjct: 291 ASAASVPVV 299


>gi|195995651|ref|XP_002107694.1| hypothetical protein TRIADDRAFT_36902 [Trichoplax adhaerens]
 gi|190588470|gb|EDV28492.1| hypothetical protein TRIADDRAFT_36902 [Trichoplax adhaerens]
          Length = 544

 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 167/310 (53%), Gaps = 14/310 (4%)

Query: 9   IFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPR 68
           IF     K++K+Y+ +     ++  ++ N + IH+ N++      G+T++ NHL+DL   
Sbjct: 239 IFHHFASKHQKNYKDERERRFRENTFRQNLRFIHSTNRQRL----GFTVKVNHLADLTDN 294

Query: 69  HYIKEMTRLTHSRIRRTLVRSPESNESV--LIPDHLDWREKGFITPDWNQEDCGACYAFS 126
             IK M     S  +    + P +   +   +   +DWR+ G +TP  +Q  CG+C++F 
Sbjct: 295 E-IKVMNGRKTSLKKSKTYQMPFNLTGLERYVAPTIDWRKLGAVTPVKDQGVCGSCWSFG 353

Query: 127 IASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
               I+G ++  + ++  LS Q ++DC+   GN GC GG       ++   GG+  E+ Y
Sbjct: 354 TTGTIEGSLYLKSGKLVSLSQQNMIDCTWGFGNNGCDGGEEFRAFEWIAKHGGIATEKSY 413

Query: 187 -PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
             Y  +   CK  +  I   I  W  +P  ++ ALK+ ++ VGP+AV ++A+  +F  Y+
Sbjct: 414 GQYLAQDGKCKLNKTKIGAKIRGWVQVPHGNQSALKLAVSAVGPVAVGMDAALKSFSFYS 473

Query: 246 SGIYDDEACTSDY--VNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCG 299
           SGIY D+ C +    ++HA+L VGY     ++ WI+KN WS HWGD+GY+ L   NN CG
Sbjct: 474 SGIYYDKQCGNKEQDLDHAVLAVGYGNENGQDYWIIKNSWSTHWGDDGYVKLSMKNNNCG 533

Query: 300 IANYAVYALI 309
           IA  A +  I
Sbjct: 534 IATDASFVNI 543


>gi|194883260|ref|XP_001975721.1| GG20405 [Drosophila erecta]
 gi|190658908|gb|EDV56121.1| GG20405 [Drosophila erecta]
          Length = 352

 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 154/290 (53%), Gaps = 26/290 (8%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM---------TRLTHSRIRRTLVRSPE 91
           I   N+ A  G+ G+ L  N L+D+  R  I  +          R T+  I     R+P 
Sbjct: 68  ISLSNKNADSGISGFRLGVNMLADM-TRKEISSLLGSKVSEFGERYTNGHINFVTARNPA 126

Query: 92  SNESVLIPDHLDWREKGFITPDWNQE-DCGACYAFSIASAIQGQIFKSTSEIEELSIQQV 150
           S     +P+  DWREKG +TP   Q   CGAC++F+   +++G I++ T+ +  LS Q +
Sbjct: 127 SAN---LPESFDWREKGGVTPPGFQGVGCGACWSFATTGSLEGHIYRRTAVLASLSQQNL 183

Query: 151 VDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK----FKRP--NIVV 204
           VDC+   GN+GC GG       Y++  G  +  + YPY   +  C+      RP    +V
Sbjct: 184 VDCADDYGNMGCDGGFQEYGFEYIRDHGVTLANK-YPYTQTEMKCRQNDTVGRPPRESLV 242

Query: 205 DISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAML 264
            I  ++ + P DE  +K  +AT+GP+A S+NA   +F+ Y  GIY+DE C    VNH++ 
Sbjct: 243 KIRDYATITPGDEEKMKEVIATLGPLACSMNADTISFEQYGGGIYEDEECNQGEVNHSVT 302

Query: 265 LVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
           +VGY     R+ WI+KN +S +WG+ G+M L R     CGIA+   Y ++
Sbjct: 303 VVGYGSENGRDYWIIKNSYSQNWGEGGFMRLIRNAGGFCGIASECSYPIL 352


>gi|222820541|gb|ACM67632.1| cathepsin 2L [Fasciola hepatica]
          Length = 326

 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 157/305 (51%), Gaps = 16/305 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++KY K+Y     + ++ + W+ N K I  HN     GL  YTL  N  +DL        
Sbjct: 25  KRKYNKEYNGADNEHRRNV-WEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDLTFEEFKAK 83

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+  + S +   +    E N+   +P  +DWR+ G++T   +Q  CG+C+AFS   
Sbjct: 84  YLIEMSPESES-LSDGISYEAEGND---VPASIDWRQYGYVTEVKDQGQCGSCWAFSAVG 139

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           AI+GQ  K        S QQ+VDC+   GN GC+GG + N   Y++   GL     YPY+
Sbjct: 140 AIEGQYVKKFQNRMLFSEQQLVDCTKRFGNHGCSGGWMENAYRYLK-DSGLETASYYPYQ 198

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
             +  C+++R   V  ++    +   DE  L   +   GP AV+++A    F +Y SGI+
Sbjct: 199 AWEYQCQYRRELGVAKVTGAYTVHSGDEMRLMQMVGREGPAAVAVDAQS-DFYMYKSGIF 257

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
             + CT+  V HA+L VGY   S    WILKN W   WG++GYM   R  NN C IA+ A
Sbjct: 258 MSQVCTTQRVTHAVLAVGYGTESGTDYWILKNSWGKWWGEDGYMRFARNRNNMCAIASVA 317

Query: 305 VYALI 309
              ++
Sbjct: 318 SVPMV 322


>gi|1093503|prf||2104214A Cys protease
          Length = 255

 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 130/220 (59%), Gaps = 6/220 (2%)

Query: 96  VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSI 155
           V +P  +DWR KG +T   +Q  CG+C+AFS   A++GQ F+ +  +  LS Q +VDCS 
Sbjct: 36  VTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCST 95

Query: 156 ISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQ 215
             GN GC GG + N   Y++  GG+  E+ YPY+     C F R  +      ++ +P  
Sbjct: 96  KYGNNGCNGGLMDNAFPYIKDNGGIDTEKSYPYEAIDDSCHFNRAQVGATDRGFTDIPQG 155

Query: 216 DEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS--- 272
           DE  +   +ATVGP++V+I+AS  +FQ Y+ G+Y++  C +  ++H +L+VG+  +    
Sbjct: 156 DEKKMPEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGE 215

Query: 273 --WILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAVYALI 309
             W++KN W   WGD G++  L+   N+CGIA+ + Y L+
Sbjct: 216 DYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASPSSYPLV 255


>gi|16506723|gb|AAL23917.1|AF419329_1 cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 157/305 (51%), Gaps = 16/305 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++KY K+Y     + ++ + W+ N K I  HN     GL  YTL  N  +DL        
Sbjct: 25  KRKYNKEYNGADNEHRRNV-WEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDLTFEEFKAK 83

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+  + S +   +    E N+   +P  +DWR+ G++T   NQ  CG+C+AFS   
Sbjct: 84  YLIEMSPESES-LSDGISYEAEGND---VPASIDWRQYGYVTEVKNQGQCGSCWAFSAVG 139

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           AI+GQ  K        S QQ+VDC+   GN GC+GG + N   Y++   GL     YPY+
Sbjct: 140 AIEGQYVKKFRNRMLFSEQQLVDCTKRFGNHGCSGGWMENAYRYLK-DSGLETASYYPYQ 198

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
             +  C+++R   V +++    +   DE  L   +   GP AV+++A    F +Y SGI+
Sbjct: 199 AWEYQCQYRRELGVAEVTGAYTVHSGDEMRLMQMVGREGPAAVAVDAQS-DFYMYKSGIF 257

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
             + CT+  V HA+L VGY   S    WI KN W   WG++GYM   R  NN C IA+ A
Sbjct: 258 MSQVCTTQRVTHAVLAVGYGTESGTDYWISKNSWGKWWGEDGYMRFARNRNNMCAIASVA 317

Query: 305 VYALI 309
              ++
Sbjct: 318 SVPMV 322


>gi|194882211|ref|XP_001975206.1| GG20691 [Drosophila erecta]
 gi|190658393|gb|EDV55606.1| GG20691 [Drosophila erecta]
          Length = 378

 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 150/303 (49%), Gaps = 15/303 (4%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A  +  +  + S    +   N    +G+  +    N  +DL    ++ ++T L 
Sbjct: 79  KTYLSAADRALHERAFASTKNVVDAGNAAFAKGVSTFKQSVNAFADLTHPEFLSQLTGLK 138

Query: 79  HSRIRRTLVRSPESNESVL-----IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
            S   +   R+  S + V+     IPD  DWRE G +TP   Q  CG+C+AF+   AI+G
Sbjct: 139 RSPEAK--ARAAASLKEVILPKKPIPDAFDWREHGGVTPVKFQGTCGSCWAFATTGAIEG 196

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNL--GCAGGSLRNTLNYV-QFAGGLMKEEDYPYKG 190
             F+ T  +  LS Q +VDC  +      GC GG       ++ +   G+ +   YPYK 
Sbjct: 197 HTFRKTGSLPNLSEQNLVDCGPLEDFSLNGCDGGFQEAAFCFIDEVQKGVSQAGAYPYKD 256

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
            +  CK+        +  ++ +PP+DE  LK  +AT+GP+A S+N    T + YA GIY+
Sbjct: 257 NKETCKYDGKKSGASLKGFAAIPPKDEEQLKKVVATLGPVACSVNGL-ETLKNYAGGIYN 315

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306
           D+ C     NH++L+VGY     ++ WI+KN W   WG+ GY  L RG N C IA    Y
Sbjct: 316 DDECNKGEPNHSILVVGYGSENGQDYWIIKNSWDDTWGEQGYFRLPRGQNYCFIAEECSY 375

Query: 307 ALI 309
            ++
Sbjct: 376 PVV 378


>gi|156384930|ref|XP_001633385.1| predicted protein [Nematostella vectensis]
 gi|156220454|gb|EDO41322.1| predicted protein [Nematostella vectensis]
          Length = 548

 Score =  171 bits (433), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 154/302 (50%), Gaps = 11/302 (3%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           KK+KK+Y+       ++ H++ N + IH+ N+       GY L  NHL D   +      
Sbjct: 250 KKHKKNYKDNKEHHTRREHFKHNLRFIHSKNRRHA----GYYLAMNHLGDRSDKELRVLR 305

Query: 75  TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
            R         L   P+      +PD ++W  +G +TP  +Q  CG+C++F     I+G 
Sbjct: 306 GRRYTKGYNGGLPYKPDMASINDVPDEMNWVIRGAVTPVKDQAVCGSCWSFGTTGTIEGT 365

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-PYKGKQS 193
           +F  T  +  LS Q ++DCS   GN  C GG    +  Y+  +GG+  EE Y PY G   
Sbjct: 366 LFLKTKYLTRLSQQNLMDCSWGEGNNACDGGEDFRSYQYIMKSGGIATEESYGPYLGADG 425

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C  K   I   I+ +  +   D  ALK  +A  GPI+VSI+AS  +   Y+ G+Y +  
Sbjct: 426 YCHKKDAEIGATITGYVNITEGDLSALKTAIAQKGPISVSIDASHKSLSFYSYGVYYEPK 485

Query: 254 C--TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYA 307
           C   ++ ++H++L VGY     +  W++KN WS HWG NGY+ + + +N CG+A  A Y 
Sbjct: 486 CGNKNEDLDHSVLAVGYGTMDGKPYWMIKNSWSTHWGMNGYVLMSQKDNNCGVATAATYV 545

Query: 308 LI 309
           L+
Sbjct: 546 LM 547


>gi|113208365|dbj|BAF03553.1| cysteine proteinase CP2 [Phaseolus vulgaris]
          Length = 365

 Score =  171 bits (433), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 155/305 (50%), Gaps = 27/305 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y  K     +   ++SN ++   H Q     +HG T      SDL P  + ++
Sbjct: 55  KAKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDPSAVHGVT----KFSDLTPAEFHRK 110

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
              L   R+     ++P    + L P   DWR+KG +T   +Q  CG+C++FS   A++G
Sbjct: 111 FLGLKPLRLPAHAQKAPILPTNNL-PKDFDWRDKGAVTNVKDQGSCGSCWSFSTTGALEG 169

Query: 134 QIFKSTSEIEELSIQQVVDCSII-------SGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
             F +T E+  LS QQ+VDC  +       S + GC GG + N   Y+  +GG+ +E+DY
Sbjct: 170 AHFLATGELVSLSEQQLVDCDHVCDPEEYGSCDSGCNGGLMNNAFEYLIGSGGVQREKDY 229

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   CKF +  I   +S++SV+   DE  +   L   GP+AV+INA     Q Y  
Sbjct: 230 PYTGRDGTCKFDKSKIAASVSNYSVI-SLDEEQIAANLVKNGPLAVAINAV--YMQTYVG 286

Query: 247 GIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHWGDNGYMYLKRGN 295
           G+     C   +++H +LLVGY   +           WI+KN W  +WG+NGY  + RG 
Sbjct: 287 GVSCPYIC-GKHLDHGVLLVGYGEGAYAPIRFKEKPYWIIKNSWGENWGENGYYKICRGR 345

Query: 296 NRCGI 300
           N CG+
Sbjct: 346 NVCGV 350


>gi|312985015|gb|ACX54787.2| cysteine protease [Arachis diogoi]
          Length = 360

 Score =  171 bits (433), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 27/309 (8%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   + K+ K Y  +     +   +++N ++   H +      HG T      SDL P  
Sbjct: 44  FTTFKTKFGKSYATQEEHDYRFGVFRANLRRAKLHAKLDPSAEHGVT----KFSDLTPEE 99

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           + ++   L   R+  T  ++P    S L P++ DWR+KG +TP  NQ  CG+C+AFS   
Sbjct: 100 FKRQYLGLKPLRLPSTANKAPILPTSDL-PENFDWRDKGAVTPVKNQGSCGSCWAFSTTG 158

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSII-------SGNLGCAGGSLRNTLNYVQFAGGLMK 182
           A++G  + ST E+  LS QQ+VDC  +       + + GC GG + N  +Y+  AGG+  
Sbjct: 159 ALEGAHYLSTGELVSLSEQQLVDCDHVCDPEEYGACDAGCNGGLMNNAFDYILQAGGVQT 218

Query: 183 EEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
           E+DYPY G+   CKF +  +   ++++SV+   DE  +   L   GP+AV INA     Q
Sbjct: 219 EKDYPYSGRDETCKFDKSKVAATVANFSVV-SLDEDQIAANLVKHGPLAVGINAI--FMQ 275

Query: 243 LYASGIYDDEACTSDYVNHAMLLVGY-----------TRNSWILKNWWSHHWGDNGYMYL 291
            Y  G+     C  + ++H +LLVGY            +  WI+KN W   WG++GY  +
Sbjct: 276 TYIGGVSCPYICGKN-LDHGVLLVGYGAAGYAPIRFKDKPFWIIKNSWGESWGEDGYYKI 334

Query: 292 KRGNNRCGI 300
            RG N CG+
Sbjct: 335 CRGKNVCGV 343


>gi|169807671|emb|CAM57981.1| silicatein alpha [Geodia cydonium]
          Length = 334

 Score =  171 bits (433), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 156/304 (51%), Gaps = 13/304 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + ++ K Y     + ++ L W +N + I+ HNQ +   + G+TL  NHL D+    Y  E
Sbjct: 36  KTQHGKSYGSVREELERHLVWLANREYINAHNQNSH--IFGFTLAMNHLGDITDAEY--E 91

Query: 74  MTRLTHSRI---RRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
               T+  I     T V  P    S L PD +DWR    +T   +Q  CGA YAFS   A
Sbjct: 92  EIYSTYCDIDHGNYTKVYDPSRYSSTL-PDAIDWRTNNAVTSIKDQGYCGASYAFSAVGA 150

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           ++G    +T  +  LS Q ++DCSI  GN GC GG++ +T  Y+    G+     YPY  
Sbjct: 151 LEGANALATGTLTSLSEQNIIDCSIPYGNHGCKGGNMYDTYLYIVANEGIDTSASYPYSA 210

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           KQ  C +        IS+   +    E  L+  +A +GPIAV+++A    F+ Y+SG+Y 
Sbjct: 211 KQLGCSYSVSGRGARISNSISIESGSEEGLQSAVANIGPIAVAVDAQSSAFRYYSSGVYS 270

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAV 305
              C+S  + HAM++ GY     +  +++KN +  +WG NGY+ + R   N+CGIA  A 
Sbjct: 271 STQCSSSTLTHAMVVTGYGTYNGKEYYLVKNSFGTNWGMNGYILMARNKYNQCGIATDAS 330

Query: 306 YALI 309
           Y  +
Sbjct: 331 YPTL 334


>gi|195335257|ref|XP_002034291.1| GM21790 [Drosophila sechellia]
 gi|194126261|gb|EDW48304.1| GM21790 [Drosophila sechellia]
          Length = 382

 Score =  171 bits (433), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 151/303 (49%), Gaps = 15/303 (4%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A  +  +  + S    +   N    QG++ +    N  +DL    ++ ++T L 
Sbjct: 83  KTYLSAADRALHEGAFASTKNLVDAGNAAFAQGVNTFKQAVNAFADLTHSEFLSQLTGLK 142

Query: 79  HSRIRRTLVRSPESNESV-----LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
            S   +   R+  S + V      IP+  DWRE G +TP   Q  CG+C+AF+   AI+G
Sbjct: 143 RSPEAK--ARAAASLKEVDLPAKPIPEAFDWREHGGVTPVKFQGVCGSCWAFATTGAIEG 200

Query: 134 QIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPYKG 190
             F+ T  +  LS Q +VDC  +   G  GC GG       ++ +   G+ + E YPY  
Sbjct: 201 HTFRKTGSLPNLSEQNLVDCGPVQDFGLNGCDGGFQEAAFCFIDEVQKGVSQAEAYPYID 260

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
            +  CK+        +  ++ +PP+DE  LK  +AT+GP+A S+N    T + YA GIY+
Sbjct: 261 NKDTCKYDGSKSGATLQGFAAIPPKDEEQLKKVVATLGPVACSVNGL-ETLKNYAGGIYN 319

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306
           D+ C     NH++L+VGY     ++ WI+KN W   WG+ GY  L RG N C IA    Y
Sbjct: 320 DDECNKGEPNHSILVVGYGSENGQDYWIVKNSWDDTWGEQGYFRLPRGQNFCFIAEECSY 379

Query: 307 ALI 309
            ++
Sbjct: 380 PVV 382


>gi|357116897|ref|XP_003560213.1| PREDICTED: probable cysteine proteinase A494-like [Brachypodium
           distachyon]
          Length = 373

 Score =  171 bits (433), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 151/310 (48%), Gaps = 30/310 (9%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGL-HGYTLRENHLSDLHPRHYIKE 73
           +++ K+Y   A +  ++L   + +      +Q    G  HG T      SDL P  +   
Sbjct: 59  RRHGKEYSGGAEEYARRLRVFAANLARAAAHQALDPGARHGVT----PFSDLTPEEFQAR 114

Query: 74  MTRLTHSRIRRTLVRSPESN--ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +T L        +  +  +   E   +P   DWR KG +T    Q  CG+C+AFS   A+
Sbjct: 115 LTGLQQQGTNNNMPAAARATAEELATLPASFDWRAKGAVTEVKMQGMCGSCWAFSTTGAV 174

Query: 132 QGQIFKSTSEIEELSIQQVVDCS----IISGN---LGCAGGSLRNTLNYVQFAGGLMKEE 184
           +G  F +T ++  LS QQ+VDC      ++ N    GC+GG + N   Y+  AGGLM++ 
Sbjct: 175 EGAHFVATGKLLNLSEQQLVDCDHTCDAVAKNECDSGCSGGLMTNAYTYLIRAGGLMEQA 234

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY G Q  C+F    + V ++S++ +PP DE  ++ +L   GP+AV +NA+    Q Y
Sbjct: 235 AYPYTGAQGTCRFDANKVAVRVTSFTAVPPDDEDQIRASLVRAGPLAVGLNAA--FMQTY 292

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYT-----------RNSWILKNWWSHHWGDNGYMYLKR 293
             G+     C    +NH +LLVGY            R  WI+KN W   WG+ GY  L R
Sbjct: 293 LGGVSCPLLCPRKLINHGVLLVGYGARGLAPLRLGYRPYWIIKNSWGKEWGEGGYYRLCR 352

Query: 294 G---NNRCGI 300
           G    N CG+
Sbjct: 353 GARNRNVCGV 362


>gi|225446523|ref|XP_002275891.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP2 [Vitis vinifera]
          Length = 358

 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 155/284 (54%), Gaps = 16/284 (5%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           +QSN + I+  N +       +TL +N  +D+    Y      L  S   R    S +  
Sbjct: 69  YQSNVRFINYINAQN----FSFTLTDNQFADMTNEEYKALYMGLGTSETSRKNQSSFKRE 124

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
            S ++P  +DWR+ G +TP  NQ +CG+C+AFS  +A++G     T ++  LS Q+++DC
Sbjct: 125 RSKVLPISVDWRKMGAVTPVRNQGECGSCWAFSTVAAVEGINKIRTGKLVSLSEQELLDC 184

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC-KFKRPNIVVDISSWSVL 212
            I SGN GC GG + N   +++  GG+    +YPY G+Q IC K K  N VV IS +  +
Sbjct: 185 DIDSGNEGCNGGYMVNAFKFIKQNGGITTARNYPYIGEQGICNKDKAANHVVKISGYETV 244

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
           PP +E  L+  +A   P++V+I+A  + FQLY+ GI++        +NHA+ ++GY  ++
Sbjct: 245 PPNNEKILQAAVAKQ-PVSVAIDAGGYEFQLYSKGIFN--GFCGKQLNHAVTVIGYGEDN 301

Query: 273 ----WILKNWWSHHWGDNGYMYLKRGNNR----CGIANYAVYAL 308
               W++KN W   WG+ GY  + R +      CGIA  A Y +
Sbjct: 302 GKKYWLVKNSWGTGWGEAGYARMIRDSRDDEGICGIAMEASYPI 345


>gi|50657027|emb|CAH04631.1| cathepsin H [Suberites domuncula]
          Length = 335

 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 153/328 (46%), Gaps = 37/328 (11%)

Query: 7   IIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGL-------------- 52
            I  + P     +DY K+         WQ  H K+++  +E+Q  L              
Sbjct: 20  FIPLVLPIPGLYEDYFKE---------WQEKHGKVYSTEEESQSRLKVFMKNVIYIDNHN 70

Query: 53  ---HGYTLRENHLSDLHPRHYIKE-MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKG 108
              H Y L  N  +D+    +  + +    H     +L   P        P  +DWR KG
Sbjct: 71  KQGHSYELEVNEYADMTLDEFKDQYLMEPQHCSATHSLKSDPPKYRDP--PKAIDWRSKG 128

Query: 109 FITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLR 168
            +TP  NQ  CG+C+ FS    ++   F  T ++  LS QQ+VDC+    N GC GG   
Sbjct: 129 AVTPVKNQGQCGSCWTFSTTGCLESHHFLKTGQLVSLSEQQLVDCAQAFNNNGCNGGLPS 188

Query: 169 NTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVG 228
               Y+ + GGL  EE YPY+     C F    +   +S+   +  +DE  L   + TVG
Sbjct: 189 QAFEYIHYNGGLDSEESYPYRAHDEKCHFVPSEVSATVSNVVNITSKDEMQLYNAVGTVG 248

Query: 229 PIAVSINASPHTFQLYASGIYDDEACTSD--YVNHAMLLVGYT-----RNSWILKNWWSH 281
           P++++ + S   F+ Y  G+Y  + C +D  +VNHA+L VGY       + WI+KN W  
Sbjct: 249 PVSIAYDVSA-DFRFYKKGVYKSKECKTDPEHVNHAVLAVGYNTTESGEDYWIVKNSWGT 307

Query: 282 HWGDNGYMYLKRGNNRCGIANYAVYALI 309
            +G NGY ++ RG N CG+A+ A Y ++
Sbjct: 308 KFGINGYFWIARGENMCGLADCASYPIV 335


>gi|535600|gb|AAA29137.1| cathepsin [Fasciola hepatica]
          Length = 326

 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 155/310 (50%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y K A D  ++  W+ N K I  HN     GL  Y L  N  +D+        
Sbjct: 25  KRIYNKEY-KGADDDHRRNIWEQNVKHIQEHNLRHDLGLVTYKLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P       +PD +DWRE G++T   +Q  CG+C+AF
Sbjct: 84  YLTEMPRASELLSHG--------IPYKANKRAVPDRIDWRESGYVTEVKDQGGCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           S   A++GQ  K+       S QQ+VDCS   GN GC GG + N   Y++   GL  E  
Sbjct: 136 STTGAMEGQYMKNEKTSISFSEQQLVDCSGPFGNYGCNGGLMENAYEYLKRF-GLETESS 194

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPY+  +  C++     V  ++ +  +   DE  L+  +    P AV+++     F +Y 
Sbjct: 195 YPYRAVEGQCRYNEQLGVAKVTGYYTVHSGDEVELQNLVGCRRPAAVALDVESD-FMMYR 253

Query: 246 SGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGY--MYLKRGNNRCG 299
           SGIY  + C+ D +NH +L VGY      + WI+KN W   WG++GY  M  KRG N CG
Sbjct: 254 SGIYQSQTCSPDRLNHGVLAVGYGIQDGTDYWIVKNSWGTWWGEDGYIRMVRKRG-NMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASVPMV 322


>gi|449670651|ref|XP_002168787.2| PREDICTED: uncharacterized protein LOC100201231 [Hydra
           magnipapillata]
          Length = 1244

 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 160/315 (50%), Gaps = 42/315 (13%)

Query: 27  DSKKKLH-WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR- 84
           + +K+ H ++ N + +++HN++  Q    + LR NH  D+       E   + H  + + 
Sbjct: 528 EERKRTHIFKHNARFVNSHNRKNTQ----FKLRPNHFIDMSA-----EELNMFHGNLAKD 578

Query: 85  --------TLVRSPESNESVL-----------------IPDHLDWREKGFITPDWNQEDC 119
                    +   P+S  ++                  IP+ +DWRE G +T    Q  C
Sbjct: 579 TKKHKGIINMADIPDSKSNIFNKADIDKKPFVQVNEDEIPEEIDWREFGAVTSVKGQGIC 638

Query: 120 GACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGG 179
             CYAF+ A A +G  F+ T ++ E+S QQ+VDCS   GN GC GG   + L+++ F  G
Sbjct: 639 SGCYAFTAAGAAEGGWFRKTGKLIEVSSQQLVDCSWGYGNHGCKGGHYASALSWI-FTHG 697

Query: 180 LMKEEDY-PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASP 238
           +  ++ Y  Y G++  C F        I  +S + P +  ALK  +A  GP+AVSIN  P
Sbjct: 698 VSTDKSYGKYLGQEGYCHFNDTLFGAQIDGFSYIQPYNISALKRVVAKYGPVAVSINTKP 757

Query: 239 HTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG 294
            +F+ Y+ GIYDD+ C S+  +H+ L+VGY     R  WI+KN WS  WG+ GYM L   
Sbjct: 758 LSFKFYSKGIYDDKECLSNQTHHSALIVGYGKLNGREYWIIKNSWSSSWGEGGYMKLAME 817

Query: 295 NNRCGIANYAVYALI 309
           N+ CG+    V  +I
Sbjct: 818 NHLCGVTENPVAVVI 832


>gi|302143380|emb|CBI21941.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  171 bits (432), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 155/284 (54%), Gaps = 16/284 (5%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           +QSN + I+  N +       +TL +N  +D+    Y      L  S   R    S +  
Sbjct: 65  YQSNVRFINYINAQN----FSFTLTDNQFADMTNEEYKALYMGLGTSETSRKNQSSFKRE 120

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
            S ++P  +DWR+ G +TP  NQ +CG+C+AFS  +A++G     T ++  LS Q+++DC
Sbjct: 121 RSKVLPISVDWRKMGAVTPVRNQGECGSCWAFSTVAAVEGINKIRTGKLVSLSEQELLDC 180

Query: 154 SIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC-KFKRPNIVVDISSWSVL 212
            I SGN GC GG + N   +++  GG+    +YPY G+Q IC K K  N VV IS +  +
Sbjct: 181 DIDSGNEGCNGGYMVNAFKFIKQNGGITTARNYPYIGEQGICNKDKAANHVVKISGYETV 240

Query: 213 PPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS 272
           PP +E  L+  +A   P++V+I+A  + FQLY+ GI++        +NHA+ ++GY  ++
Sbjct: 241 PPNNEKILQAAVAKQ-PVSVAIDAGGYEFQLYSKGIFN--GFCGKQLNHAVTVIGYGEDN 297

Query: 273 ----WILKNWWSHHWGDNGYMYLKRGNNR----CGIANYAVYAL 308
               W++KN W   WG+ GY  + R +      CGIA  A Y +
Sbjct: 298 GKKYWLVKNSWGTGWGEAGYARMIRDSRDDEGICGIAMEASYPI 341


>gi|10798511|emb|CAC12806.1| cathepsin L1 [Fasciola hepatica]
          Length = 311

 Score =  170 bits (431), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/309 (33%), Positives = 154/309 (49%), Gaps = 24/309 (7%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 10  KRMYNKEY-NGADDEHRRNIWEENVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 68

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 69  YLTEMPRASDILSHG--------IPYEANNRAVPDKIDWRESGYVTGVKDQGNCGSCWAF 120

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           S    ++GQ  K+       S QQ+VDCS   GN GC+GG + N   Y++   GL  E  
Sbjct: 121 STTGTMEGQYMKNEKTSISFSEQQLVDCSGPWGNNGCSGGLMENAYEYLKRF-GLETESS 179

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPY+  +  C++     V  ++ +  +    E  LK  + + GP A+++ A    F +Y 
Sbjct: 180 YPYRAVEGQCRYNEQLGVAKVTGYYTVHSGSEVELKNLVGSEGPAAIAVEAESD-FMMYR 238

Query: 246 SGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGI 300
           SGIY  + C    +NHA+L VGY        WI+KN W   WG+ GY+ + R   N CGI
Sbjct: 239 SGIYQSQTCLPFALNHAVLAVGYGTQDGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGI 298

Query: 301 ANYAVYALI 309
           A+ A   ++
Sbjct: 299 ASLASLPMV 307


>gi|19922198|ref|NP_610906.1| CG6347 [Drosophila melanogaster]
 gi|17862554|gb|AAL39754.1| LD36817p [Drosophila melanogaster]
 gi|21645444|gb|AAF58331.2| CG6347 [Drosophila melanogaster]
 gi|220954310|gb|ACL89698.1| CG6347-PA [synthetic construct]
 gi|220960044|gb|ACL92558.1| CG6347-PA [synthetic construct]
          Length = 352

 Score =  170 bits (431), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 154/289 (53%), Gaps = 24/289 (8%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHY-------IKEM-TRLTHSRIRRTLVRSPES 92
           I   N+ A  G+ G+ L  N L+D+  +         I E   R T+  I     R+P S
Sbjct: 68  ITLSNKNADNGVSGFRLGVNTLADMTRKEIATLLGSKISEFGERYTNGHINFVTARNPAS 127

Query: 93  NESVLIPDHLDWREKGFITPDWNQE-DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVV 151
                +P+  DWREKG +TP   Q   CGAC++F+   A++G +F+ T  +  LS Q +V
Sbjct: 128 AN---LPEMFDWREKGGVTPPGFQGVGCGACWSFATTGALEGHLFRRTGVLASLSQQNLV 184

Query: 152 DCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK----FKRP--NIVVD 205
           DC+   GN+GC GG       Y++  G  +  + YPY   +  C+      RP    +V 
Sbjct: 185 DCADDYGNMGCDGGFQEYGFEYIRDHGVTLANK-YPYTQTEMQCRQNETAGRPPRESLVK 243

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
           I  ++ + P DE  +K  +AT+GP+A S+NA   +F+ Y+ GIY+DE C    +NH++ +
Sbjct: 244 IRDYATITPGDEEKMKEVIATLGPLACSMNADTISFEQYSGGIYEDEECNQGELNHSVTV 303

Query: 266 VGY----TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAVYALI 309
           VGY     R+ WI+KN +S +WG+ G+M  L+     CGIA+   Y ++
Sbjct: 304 VGYGTENGRDYWIIKNSYSQNWGEGGFMRILRNAGGFCGIASECSYPIL 352


>gi|2511691|emb|CAB17075.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 365

 Score =  170 bits (431), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 154/305 (50%), Gaps = 27/305 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y  K     +   ++SN ++   H Q     +HG T      SDL P  + ++
Sbjct: 55  KSKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDPSAVHGVT----KFSDLTPAEFHRK 110

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
              L   R+     ++P    + L P   DWR+KG +T   +Q  CG+C++FS   A++G
Sbjct: 111 FLGLKPLRLPAHAQKAPILPTNNL-PKDFDWRDKGAVTNVKDQGSCGSCWSFSTTGALEG 169

Query: 134 QIFKSTSEIEELSIQQVVDCSII-------SGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
             F +T E+  LS QQ+VDC  +       S + GC GG + N   Y+  +GG+ +E+DY
Sbjct: 170 AHFLATGELVSLSEQQLVDCDHVCDPEEYGSCDSGCNGGLMNNAFEYLIGSGGVQREKDY 229

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   CKF +  I   +S++SV+   DE  +   L   GP+AV+INA     Q Y  
Sbjct: 230 PYTGRDGTCKFDKSKIAASVSNYSVI-SLDEEQIAANLVKNGPLAVAINAV--YMQTYVG 286

Query: 247 GIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHWGDNGYMYLKRGN 295
           G+     C   +++H +LLVGY   +           WI+KN W  +WG NGY  + RG 
Sbjct: 287 GVSCPYIC-GKHLDHGVLLVGYGEGAYAPIRFKEKPYWIIKNSWGENWGGNGYYKICRGR 345

Query: 296 NRCGI 300
           N CG+
Sbjct: 346 NVCGV 350


>gi|38045864|gb|AAR08900.1| cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  170 bits (431), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 158/305 (51%), Gaps = 16/305 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y     D+ ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 25  KRMYNKEY-NGVDDAHRRNIWEENVKHIQEHNIRHDLGLVTYTLGLNQFTDMTFEEFKAK 83

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y++E+ R   S I    +  P       +P+ +DWRE G++T   +Q DCG+C+AFS   
Sbjct: 84  YLREIPRA--SDIHSHGI--PYEANDRAVPESIDWREFGYVTEVKDQGDCGSCWAFSATG 139

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++GQ  K+       S QQ+VDCS   GN GC+GG + +   Y+ +  GL  E  YPYK
Sbjct: 140 AMEGQYMKNQKANISFSEQQLVDCSGDYGNRGCSGGFMEHAYEYL-YEVGLETESSYPYK 198

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            ++  CK+     V  ++ +       E  L   +   GP AV+++     F +Y  GIY
Sbjct: 199 AEEGPCKYDSRLGVAKVNGFYFDHFGVESKLAHLVGDKGPAAVAVDVES-DFLMYRGGIY 257

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
               C+S+ +NHAML+VGY        WI+KN W   WGD+GY+ + R  +N CGIA++A
Sbjct: 258 ASRNCSSEKLNHAMLVVGYGTQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCGIASFA 317

Query: 305 VYALI 309
              ++
Sbjct: 318 SLPVV 322


>gi|157862759|gb|ABV90502.1| cathepsin L, partial [Fasciola gigantica]
          Length = 280

 Score =  170 bits (431), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 146/287 (50%), Gaps = 25/287 (8%)

Query: 37  NHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRHYIKEMTR----LTHSRIRRTLVR 88
           N K I  HN     GL  YTL  N  +D+        Y+ EM R    L+H         
Sbjct: 1   NAKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMPRASDILSHG-------- 52

Query: 89  SPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQ 148
            P    +  +PD +DWRE G++T   +Q +CG+C+AFS    ++GQ  K+       S Q
Sbjct: 53  IPYEANNRAVPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGTMEGQYMKNQRTSISFSEQ 112

Query: 149 QVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDIS 207
           Q+VDCS   GN+GC+GG + N   Y+ QF  GL  E  YPY+  +  C++ R   VV ++
Sbjct: 113 QLVDCSGPWGNMGCSGGLMENAYEYLKQF--GLETESSYPYRAVEGQCRYNRQLGVVKVT 170

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVG 267
            +  +    E  LK  +   GP AV+++     F +Y SGIY  + C+   +NHA+L VG
Sbjct: 171 GYYTVHSGSEVGLKNLVGAEGPAAVAVDVESD-FMMYRSGIYQSQTCSPFGLNHAVLAVG 229

Query: 268 YTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
           Y        WI+KN W   WG+ GY+ + R   N CGIA+ A   ++
Sbjct: 230 YGTQGGTDYWIVKNSWGSSWGERGYIRMVRNRGNMCGIASMASLPMV 276


>gi|121543823|gb|ABM55576.1| putative cathepsin L-like cysteine protease precursor
           [Maconellicoccus hirsutus]
          Length = 339

 Score =  170 bits (431), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 168/322 (52%), Gaps = 19/322 (5%)

Query: 1   MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN 60
           + ++EW +     + +Y K Y     D  +   +  N  +I  HN+   +GL  +    N
Sbjct: 24  LFHEEWQLF----KTQYSKKYTTDIEDRLRMKIFIDNKYRIAQHNKLFHKGLVTFEQGIN 79

Query: 61  HLSDLHPRHYIKEM------TRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDW 114
             SD+    + ++M       R T +    ++  +P  N  V  PD +DWR KG + P  
Sbjct: 80  EYSDMLQSEFNEKMGQKSSNQRNTEANGLPSIRFTPLHN--VNPPDSVDWRTKGLVGPVG 137

Query: 115 NQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174
            Q +C + YA+S   A++GQ+     + + +S+Q V+DCS  +GN GC+GG+  ++  Y+
Sbjct: 138 KQVNCSSGYAWSAIGALEGQLASDKKKFQGISVQNVIDCSESTGNKGCSGGNQHHSYFYI 197

Query: 175 QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
              GG+  +  YPYK  +  C FK+ N+V  +S    LP   E  L  ++A  GP+A +I
Sbjct: 198 YKQGGVDDDVSYPYKDAEEPCAFKKENVVTRVSGEITLPDGYETNLHESVAVYGPVAATI 257

Query: 235 NASPHTFQLYASGIYDDEACTS--DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGY 288
           +A+  +F  Y  GIY +  C +  D VNH +L+VGY     ++ WI+KN +   WG++GY
Sbjct: 258 DATHQSFHSYKGGIYFEPDCGNKKDEVNHGVLVVGYGSENGQDYWIVKNSYGTDWGEDGY 317

Query: 289 MYLKRG-NNRCGIANYAVYALI 309
           + + R  NN CGIA  A   ++
Sbjct: 318 IRMARNKNNHCGIATSASVPML 339


>gi|57118007|gb|AAW34135.1| cysteine protease gp2b [Zingiber officinale]
          Length = 379

 Score =  170 bits (431), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 154/287 (53%), Gaps = 18/287 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           ++ N + +  HN  A +G H + L  N  +DL    Y     R   SR+RR+      S 
Sbjct: 75  FKENLQFVDKHNAAADRGEHTFRLGMNRFADLTNEEYRTRFLR-DFSRLRRSASGKISSR 133

Query: 94  ----ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
               E   +PD +DWREKG + P  NQ  CG+C+AFS  +A++G     T ++  LS QQ
Sbjct: 134 YRLREGDDLPDSIDWREKGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQ 193

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW 209
           +VDC+  + N GC GG +     ++   GG+  EE YPY+G+  IC       VV I S+
Sbjct: 194 LVDCT--TANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQNGICNSTVNAPVVSIDSY 251

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY- 268
             +P  +E +L+  +A   P++V+++A+   FQLY SGI+      S   NHA+ +VGY 
Sbjct: 252 ENVPSHNEQSLQKAVANQ-PVSVTMDAAGRDFQLYRSGIFTGSCNIS--ANHALTVVGYG 308

Query: 269 ---TRNSWILKNWWSHHWGDNGYMYLKRG----NNRCGIANYAVYAL 308
               ++   +KN W  +WG++GY+ ++R     N +CGI  +A Y +
Sbjct: 309 TENDKDYRTVKNSWGKNWGESGYIRVERNIGNPNGKCGITRFASYPV 355


>gi|195484886|ref|XP_002090862.1| GE12565 [Drosophila yakuba]
 gi|194176963|gb|EDW90574.1| GE12565 [Drosophila yakuba]
          Length = 353

 Score =  170 bits (430), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 33/294 (11%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR-------------TLV 87
           I   N+ A  G+ G+ L  N L+D+      KE+  L  S+I               T  
Sbjct: 68  ITLSNKNADNGVAGFRLGVNPLADMTK----KEIATLLGSKISEFGERYTNGHVNFVTPA 123

Query: 88  RSPESNESVLIPDHLDWREKGFITPDWNQE-DCGACYAFSIASAIQGQIFKSTSEIEELS 146
           R+P S     +P+  DWREKG +TP   Q   CGAC++F+   A++G +F+ T  +  LS
Sbjct: 124 RNPASAN---LPEMFDWREKGGVTPPGYQGVGCGACWSFATTGALEGHLFRRTGVLASLS 180

Query: 147 IQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK----FKRP-- 200
            Q +VDC+   GN+GC GG       Y++  G  +  + YPY   +  C+      RP  
Sbjct: 181 QQNLVDCADDYGNMGCDGGFQEYGFEYIRDHGVTLANK-YPYTQAEMQCRQNETAGRPPR 239

Query: 201 NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVN 260
             +V I  ++ + P DE  +K  +AT+GP+A S+NA   +F+ Y+ GIY+DE C    +N
Sbjct: 240 ESLVKIRDYATITPGDEEKMKEVIATLGPLACSMNADTISFEQYSGGIYEDEECNQGELN 299

Query: 261 HAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
           H++ +VGY     R+ WI+KN +S +WG+ G+M L R     CGIA+   Y ++
Sbjct: 300 HSVTVVGYGTENGRDYWIIKNSYSQNWGEGGFMRLPRNAGGFCGIASECSYPIL 353


>gi|66735056|gb|AAY53767.1| cysteine protease [Saprolegnia parasitica]
          Length = 523

 Score =  170 bits (430), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/284 (35%), Positives = 152/284 (53%), Gaps = 23/284 (8%)

Query: 37  NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL------THSRIRRTLVRSP 90
           N ++I  HN++A      +T+  N  S L    + K  T L        SR +  L+ +P
Sbjct: 54  NDQRIEAHNKDASSS---FTMGHNEYSHLTFDEFKKLRTGLRVSPSYIQSRAKYALM-AP 109

Query: 91  ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQV 150
             N +  +P+ +DW E+G +TP  NQ  CG+C+AFS   AI+G  F S+ ++  +S Q++
Sbjct: 110 AVNMTD-VPNEMDWVEQGGVTPVKNQGMCGSCWAFSTTGAIEGAAFVSSKQLVSVSEQEL 168

Query: 151 VDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWS 210
           VDC   +G++GC GG + N   +V+   GL KEEDYPY  K+  C  K+   V  ++++ 
Sbjct: 169 VDCDH-NGDMGCNGGLMDNAFKWVKTHKGLCKEEDYPYHAKEGTCALKKCKPVTKVTAFH 227

Query: 211 VLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTR 270
            +P  DE ALK  +A   P++V+I A    FQ Y SG++D    T   ++H +L+VGY  
Sbjct: 228 DVPANDEQALKAAVAKQ-PVSVAIEADQPEFQFYKSGVFDKSCGTK--LDHGVLVVGYGE 284

Query: 271 NS----WILKNWWSHHWGDNGYMYLKR----GNNRCGIANYAVY 306
                 W +KN W   WGD GY+ L R       +CG+A    Y
Sbjct: 285 EGGKKYWKVKNSWGADWGDKGYIKLAREFGPETGQCGVAMVPSY 328


>gi|330805273|ref|XP_003290609.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
 gi|325079248|gb|EGC32857.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
          Length = 333

 Score =  170 bits (430), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 128/215 (59%), Gaps = 6/215 (2%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +DWREKG ++   +Q  CG+C++FS   A++G     +  +  LS Q +VDCS   G
Sbjct: 118 PDSIDWREKGAVSQVKDQGQCGSCWSFSTTGAVEGAHQIKSGNMVSLSEQNLVDCSGQYG 177

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   Y+   GG+  E  YPY   Q  CKF +     +I  +  +P  +E 
Sbjct: 178 NQGCEGGLMVNAFEYIIDNGGIATESSYPYTAAQGRCKFTKSMNGANIIGYKEIPQGEED 237

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWI 274
           +L   LA   P++V+I+AS  +FQLY+SG+YD+ AC+S+ ++H +L VGY     ++ +I
Sbjct: 238 SLTAALAKQ-PVSVAIDASHMSFQLYSSGVYDEPACSSEALDHGVLAVGYGTLEGKDYYI 296

Query: 275 LKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYAL 308
           +KN W   WG +GY+++ R   N+CG+A  A Y +
Sbjct: 297 IKNSWGPTWGQDGYIFMSRNAQNQCGVATMASYPI 331


>gi|9843862|emb|CAC03737.1| silicatein protein [Suberites domuncula]
          Length = 330

 Score =  170 bits (430), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 154/306 (50%), Gaps = 16/306 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  + K Y  +  + ++ L W SN K I  HN  +   + G+TL  N   DL    Y   
Sbjct: 31  KSTHSKMYESQLMELERHLTWLSNKKYIEQHNVNSH--IFGFTLAMNQFGDLSELEYANY 88

Query: 74  MTRL-----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           + +            +T  R P  +     P+ +DWR KG +T   +Q DCGA YAFS  
Sbjct: 89  LGQYRIEDKKSGNYSKTFQRDPLQD----YPEAVDWRTKGAVTAVKDQGDCGASYAFSAM 144

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++G    +      LS Q ++DCSI  GN GC GG++ +   YV    G+ ++  YP+
Sbjct: 145 GALEGANALAKGNAVSLSEQNIIDCSIPYGNHGCHGGNMYDAFLYVIANEGVDQDSAYPF 204

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            GKQS C +        +S    +    E  L+  ++ VGP++V+I+ +   F+ Y SG+
Sbjct: 205 VGKQSSCNYNSKYKGTSMSGMVSIKSGSESDLQAAVSNVGPVSVAIDGANSAFRFYYSGV 264

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANY 303
           YD   C+S  +NHAM++ GY     +  W+ KN W  +WG++GY+ + R   N+CGIA  
Sbjct: 265 YDSSRCSSSSLNHAMVVTGYGSYNGKKYWLAKNSWGTNWGNSGYVMMARNKYNQCGIATD 324

Query: 304 AVYALI 309
           A Y  +
Sbjct: 325 ASYPTL 330


>gi|146215996|gb|ABQ10200.1| cysteine protease Cp2 [Actinidia deliciosa]
          Length = 376

 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 173/323 (53%), Gaps = 25/323 (7%)

Query: 2   TNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENH 61
           T++E + I+     K+ K Y       ++   ++ N K +  HN E +     Y +  N 
Sbjct: 39  TDEEVMGIYAEWLAKHGKAYNGIGERERRFEIFKDNLKFVDEHNSENRS----YKVGLNR 94

Query: 62  LSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN------ESVLIPDHLDWREKGFITPDWN 115
            +DL    Y + M   T +  +R  ++S  ++      +S ++P+ +DWRE G + P  +
Sbjct: 95  FADLTNEEY-RSMFLGTKTDSKRRFMKSKSASRRYAVQDSDMLPESVDWRESGAVAPIKD 153

Query: 116 QEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQ 175
           Q  CG+C+AFS  +A++G    +T E+ +LS Q++VDC     + GC GG +     ++ 
Sbjct: 154 QGSCGSCWAFSTVAAVEGVNQIATGEMIQLSEQELVDCDRTY-DAGCNGGLMDYAFEFII 212

Query: 176 FAGGLMKEEDYPYKGKQSICKFKRPNI-VVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
             GG+  EEDYPY+G    C  +R N  VV I+ +  +PP DE ALK  +A   P++V+I
Sbjct: 213 NNGGIDTEEDYPYRGVDGTCDPERKNTKVVSINDYEDVPPYDEMALKKAVAHQ-PVSVAI 271

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMY 290
            AS   FQLY SG++  E   +  ++H +++VGY  ++    WI++N W   WG+NGY+ 
Sbjct: 272 EASGRAFQLYLSGVFTGECGRA--LDHGVVVVGYGTDNGADHWIVRNSWGTSWGENGYIR 329

Query: 291 LKRG-----NNRCGIANYAVYAL 308
           ++R        +CGIA  A Y +
Sbjct: 330 MERNVVDNFGGKCGIAMQASYPI 352


>gi|161347489|gb|ABW75768.2| procathepsin L [Fasciola hepatica]
          Length = 311

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 157/305 (51%), Gaps = 16/305 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN    +GL  Y L  N  +DL        
Sbjct: 10  KRMYNKEY-NGADDEHRRNIWEQNVKHIEEHNLRHDRGLVTYKLGLNQFTDLTFEEFKAK 68

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+ ++ S +   +    E N+   +P  +DWR+ G++T   +Q  CG+C+AFS   
Sbjct: 69  YLMEMSPVSES-LSDGISYEAEGND---VPASIDWRQYGYVTEVKDQGQCGSCWAFSAVG 124

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           AI+GQ  K        S QQ+VDC+   GN GC GG + N   Y++ + GL     YPY+
Sbjct: 125 AIEGQYVKKFQNQTLFSEQQLVDCTRRFGNHGCGGGWMENAYKYLKNS-GLETASYYPYQ 183

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G +  C++++   V  ++    +   DE  L   +   GP AV+++A    F +Y SGI+
Sbjct: 184 GWEYQCQYRKELGVAKVTGAYTVHSGDEMKLMQMVGREGPAAVAVDAQS-DFYMYESGIF 242

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
             + C+S  V HA+L VGY   S    WILKN W   WG++GYM   R   N C IA+ A
Sbjct: 243 QSQYCSSRRVTHAVLAVGYGTESGTDYWILKNSWGKWWGEDGYMRFARNRGNMCAIASVA 302

Query: 305 VYALI 309
              ++
Sbjct: 303 SVPMV 307


>gi|195584238|ref|XP_002081921.1| GD11280 [Drosophila simulans]
 gi|194193930|gb|EDX07506.1| GD11280 [Drosophila simulans]
          Length = 382

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 150/303 (49%), Gaps = 15/303 (4%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A  +  +  + S    +   N    QG++ +    N  +DL    ++ ++T L 
Sbjct: 83  KTYLSAADRALHEGAFASTKNLVDAGNAAFAQGVNTFKQAVNAFADLTHSEFLSQLTGLK 142

Query: 79  HSRIRRTLVRSPESNESVL-----IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
            S   +   R+  S + V      IP+  DWRE G +TP   Q  CG+C+AF+   AI+G
Sbjct: 143 RSPEAK--ARAAASLKEVALPAKPIPEAFDWREHGGVTPVKFQGTCGSCWAFATTGAIEG 200

Query: 134 QIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPYKG 190
             F+ T  +  LS Q +VDC  +   G  GC GG       ++ +   G+ +   YPY  
Sbjct: 201 HTFRKTGSLPNLSEQNLVDCGPVQDFGLNGCDGGFQEAAFCFIDEVQKGVSQAGAYPYID 260

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
            +  CK+        +  ++ +PP+DE  LK  +AT+GP+A S+N    T + YA GIY+
Sbjct: 261 NKDTCKYDGSKSGATLQGFAAIPPKDEEQLKKVVATLGPVACSVNGL-ETLKNYAGGIYN 319

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306
           D+ C     NH++L+VGY     ++ WI+KN W   WG+ GY  L RG N C IA    Y
Sbjct: 320 DDECNKGEPNHSILVVGYGSENGQDYWIVKNSWDDTWGEQGYFRLPRGQNYCFIAEECSY 379

Query: 307 ALI 309
            ++
Sbjct: 380 PVV 382


>gi|55740404|gb|AAV63978.1| cathepsin L2 precursor [Artemia franciscana]
          Length = 226

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 131/222 (59%), Gaps = 7/222 (3%)

Query: 95  SVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCS 154
           +V +P+ +DWREKG +TP   Q  C +C+AFS   A++ Q F+ T ++  LS Q ++DCS
Sbjct: 5   NVTVPESVDWREKGAVTPVKYQGQCASCWAFSSTGALESQTFRKTGKLISLSEQNLIDCS 64

Query: 155 IISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPP 214
              GNLGC GG +     Y++   G+  E  Y Y+ K++ C+    N       +  +P 
Sbjct: 65  GEYGNLGCKGGWISQAFEYIKDNKGIDTENKYHYEAKENFCRDNPRNRGAVALGFVNIPS 124

Query: 215 QDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDY--VNHAMLLVGYTRNS 272
            +E  LK  +ATVGP++  I+ S   FQ Y+ G+Y + +C + +  +NHA+L++GY  ++
Sbjct: 125 GEEDKLKAAVATVGPVSAVIDVSHEGFQFYSKGVYYEPSCKTSFEHLNHAVLVIGYGSDN 184

Query: 273 ----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               W++KN WS HWGD GY+ + R   N CG+A  A+Y ++
Sbjct: 185 GEDYWLVKNSWSKHWGDEGYLKIARNRKNHCGVATAALYPIV 226


>gi|348542138|ref|XP_003458543.1| PREDICTED: counting factor associated protein D-like [Oreochromis
           niloticus]
          Length = 551

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 163/315 (51%), Gaps = 25/315 (7%)

Query: 9   IFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPR 68
           +F   + K+++ Y  +    K++  +  N + IH+ N+        ++L  N LSD    
Sbjct: 247 MFSHFKDKFQRQYNDEREHEKREHAFVLNLRYIHSKNRAGMS----FSLALNSLSD---- 298

Query: 69  HYIKEMTRLTHSRIR-------RTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGA 121
              + M+ L   R R       R L    ++ E V +P+ LDWR  G +TP  +Q  CG+
Sbjct: 299 ---RTMSELATMRGRKRGKTPNRGLPFPFKAYERVNLPESLDWRLYGAVTPVKDQAICGS 355

Query: 122 CYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLM 181
           C++F+   A++G +F  T  ++ LS Q ++DCS   GN GC GG       ++   GG+ 
Sbjct: 356 CWSFATTGAVEGALFVKTGSLQVLSQQMLIDCSWGFGNNGCDGGEEWRAYEWIMKHGGIA 415

Query: 182 KEEDY-PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHT 240
             E Y  Y G    C      +   I S++ +   D+ ALK+ L   GP+AVSI+AS  +
Sbjct: 416 TTETYGAYMGMNGFCHVDSSELTARIQSYTNVTSGDQLALKMALFKNGPVAVSIDASHRS 475

Query: 241 FQLYASGIYDDEAC--TSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG 294
           F  Y+ G+Y + AC  T D ++HA+L VGY   S    W++KN WS +WG++GY+ +   
Sbjct: 476 FVFYSHGVYYEPACGNTVDDLDHAVLAVGYGTLSGEPYWLIKNSWSTYWGNDGYILMSMK 535

Query: 295 NNRCGIANYAVYALI 309
           +N CG+A  A Y  +
Sbjct: 536 DNNCGVATDATYVTL 550


>gi|414590229|tpg|DAA40800.1| TPA: putative cysteine protease family protein [Zea mays]
          Length = 381

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 141/272 (51%), Gaps = 30/272 (11%)

Query: 53  HGYTLRENHLSDLHPRHYIKEMTRL-THSRIRRTL----VRSPESNESVL-IPDHLDWRE 106
           HG T      SDL    +   +T L     ++R +       P S E V  +P   DWR+
Sbjct: 103 HGVT----PFSDLTREEFEARLTGLRAGGDVQRLMSGVPAAPPASKEEVARLPASFDWRD 158

Query: 107 KGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC----SIISGNL-- 160
           KG +T    Q  CG+C+AFS   A++G  F +T E+ +LS QQ+VDC    S ++ N   
Sbjct: 159 KGAVTGVKTQGACGSCWAFSTTGAVEGANFLATGELVDLSEQQLVDCDHTCSAVAQNECN 218

Query: 161 -GCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHA 219
            GCAGG + N  +Y+  +GGLM++  YPY G    C+F    + V +++++ +P  DE  
Sbjct: 219 NGCAGGLMTNAYSYLMESGGLMEQSAYPYTGAAGPCRFDPTQVAVRVANFTAVPAGDEAQ 278

Query: 220 LKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYT---------- 269
           ++  L   GP+AV +NA+    Q Y  G+     C   +VNH +LLVGY           
Sbjct: 279 IRAALVRRGPLAVGLNAA--FMQTYVGGVSCPLICPRAWVNHGVLLVGYGARGFAALRLG 336

Query: 270 -RNSWILKNWWSHHWGDNGYMYLKRGNNRCGI 300
            R  WI+KN W   WG+ GY  L RG+N CG+
Sbjct: 337 YRPYWIIKNSWGKQWGEQGYYRLCRGSNVCGV 368


>gi|85677146|emb|CAI46305.1| silicatein alpha [Suberites domuncula]
          Length = 330

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 154/306 (50%), Gaps = 16/306 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  + K Y  +  + ++ L W SN K I  HN  +   + G+TL  N   DL    Y   
Sbjct: 31  KSTHSKMYESQLMELERHLTWLSNKKYIEQHNVNSH--IFGFTLAMNQFGDLSELEYADY 88

Query: 74  MTRL-----THSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           + +            +T  R P  +     P+ +DWR KG +T   +Q DCGA YAFS  
Sbjct: 89  LGQYRIEDKKSGNYSKTFQRDPLQD----YPEAVDWRTKGAVTAVKDQGDCGASYAFSAM 144

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++G    +      LS Q ++DCSI  GN GC GG++ +   YV    G+ ++  YP+
Sbjct: 145 GALEGANALAKGNAVSLSEQNIIDCSIPYGNHGCHGGNMYDAFLYVIANEGVDQDSAYPF 204

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            GKQS C +        +S    +    E  L+  ++ VGP++V+I+ +   F+ Y SG+
Sbjct: 205 VGKQSSCNYNSKYKGTSMSGMVSIKSGSESDLQAAVSNVGPVSVAIDGANSAFRFYYSGV 264

Query: 249 YDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANY 303
           YD   C+S  +NHAM++ GY     +  W+ KN W  +WG++GY+ + R   N+CGIA  
Sbjct: 265 YDSSRCSSSSLNHAMVVTGYGSYNGKKYWLAKNSWGTNWGNSGYVMMARNKYNQCGIATD 324

Query: 304 AVYALI 309
           A Y  +
Sbjct: 325 ASYPTL 330


>gi|356545108|ref|XP_003540987.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 365

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 156/310 (50%), Gaps = 28/310 (9%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F+  ++++ K Y  +     +   +++N ++   H        HG T      SDL P  
Sbjct: 50  FLEFKRRFGKAYDSEDEHDYRYKVFKANMRRARRHQSLDPSAAHGVT----RFSDLTPSE 105

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           +  ++  L   R+     ++P      L P   DWR+ G +TP  NQ  CG+C++FS   
Sbjct: 106 FRNKVLGLRGVRLPLDANKAPILPTDNL-PSDFDWRDHGAVTPVKNQGSCGSCWSFSTTG 164

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCS-------IISGNLGCAGGSLRNTLNYVQFAGGLMK 182
           A++G  F ST E+  LS QQ+VDC          S + GC GG + +   Y+  +GG+M+
Sbjct: 165 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYILKSGGVMR 224

Query: 183 EEDYPYKGKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTF 241
           EEDYPY G  S  CKF +  I   ++++SV+   DE  +   L   GP+AV+INA+    
Sbjct: 225 EEDYPYSGADSGTCKFDKTKIAASVANFSVV-SLDEDQIAANLVKNGPLAVAINAA--YM 281

Query: 242 QLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHWGDNGYMY 290
           Q Y  G+     C S  +NH +LLVGY   +           WI+KN W  +WG+NGY  
Sbjct: 282 QTYIGGVSCPYVC-SRRLNHGVLLVGYGSGAYAPIRMKEKPFWIIKNSWGENWGENGYYK 340

Query: 291 LKRGNNRCGI 300
           + RG N CG+
Sbjct: 341 ICRGRNICGV 350


>gi|1498185|dbj|BAA06738.1| cysteine proteinase-1 precursor [Drosophila melanogaster]
          Length = 254

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 129/220 (58%), Gaps = 6/220 (2%)

Query: 96  VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSI 155
           V +P  +DWR KG +T   +Q  CG+C+AFS   A++GQ F+ +  +  LS Q +VDCS 
Sbjct: 35  VTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCST 94

Query: 156 ISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQ 215
             GN GC GG + N   Y++  GG+  E+ YPY+     C F R  +      ++ +P  
Sbjct: 95  KYGNNGCNGGLMDNAFPYIKDNGGIDTEKSYPYEAIDDSCHFNRAQVGATDRGFTDIPQG 154

Query: 216 DEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS--- 272
           DE  +   + TVGP++V+I+AS  +FQ Y+ G+Y++  C +  ++H +L+VG+  +    
Sbjct: 155 DEKKMPEPVPTVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGE 214

Query: 273 --WILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAVYALI 309
             W++KN W   WGD G++  L+   N+CGIA+ + Y L+
Sbjct: 215 DYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASPSSYPLV 254


>gi|123502829|ref|XP_001328382.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121911324|gb|EAY16159.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 305

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/278 (35%), Positives = 155/278 (55%), Gaps = 19/278 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W +N + +    QE  +   G+T+  N L+ L P  Y   +    +       V++ +SN
Sbjct: 34  WIANKRLV----QERNRANLGFTVALNRLAHLTPAEYQALLGYCNNG----VSVKAVKSN 85

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
              +  D +DWR KG + P  +Q  CG+C+AFS   A + Q   + S +++LS Q +VDC
Sbjct: 86  AVCI--DEIDWRSKGVVNPVQDQGQCGSCWAFSAIQAQESQYAITYSNLQKLSEQNLVDC 143

Query: 154 SIISGNLGCAGGSLRNTLNYV--QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
             +S   GC GG + +  +YV     G  M E+DY Y   +  CKF+    V  I+S+  
Sbjct: 144 --VSTCYGCNGGLMTSAYDYVINHQNGKFMLEKDYSYTAAEGSCKFEATKAVSKITSYIP 201

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--- 268
           +   DE  L V +AT GP AV+I+AS  +FQ+Y+SGIYD+ +C+S  ++H +  VG+   
Sbjct: 202 VAEGDEKDLAVKIATYGPAAVAIDASAWSFQVYSSGIYDEPSCSSYNLDHGVGCVGFGKE 261

Query: 269 -TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYA 304
            ++N WI++N W  +WG+ GY+  +K  NN+CGIA  A
Sbjct: 262 GSKNYWIVRNSWGEYWGEKGYIRMIKDKNNQCGIATMA 299


>gi|281203744|gb|EFA77940.1| hypothetical protein PPL_08585 [Polysphondylium pallidum PN500]
          Length = 505

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 176/344 (51%), Gaps = 52/344 (15%)

Query: 10  FIFPQKKYKKDY---------RKKATDSKKKLH-WQSNHKKIHTHNQEAQQGLHGYTLRE 59
            +F +++YK ++         +   ++ KK+   ++SN   +H+ N +  Q + G     
Sbjct: 170 LLFSEEQYKNEFENWIDRFEKKYDVSEFKKRFSIFKSNMDFVHSWNSKNSQTVLGL---- 225

Query: 60  NHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPE----SNESVLIPDH--LDWREKGFITPD 113
           NHL+DL    Y ++    TH   ++ ++ +P     SN   +  D   +DWR+KG ++P 
Sbjct: 226 NHLADLTNLEY-RQFYLGTH---KKAVLGTPGNHEVSNLQSVFGDSATVDWRQKGAVSPI 281

Query: 114 WNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNY 173
            +Q  CG+C++FS   +++G     +  + ELS Q +VDCS   GN+GC GG +     Y
Sbjct: 282 KDQGQCGSCWSFSTTGSVEGAHQIKSGNMVELSEQNLVDCSTSEGNMGCNGGLMDYAFEY 341

Query: 174 VQFAGGLMKEEDYPYKGKQ-SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAV 232
           +    G+  E  YPY     + CK+ + N    ISS+  +    E  L   +   GP++V
Sbjct: 342 IITNNGIDTESSYPYTASSGTTCKYNKANSGATISSYKNITAGSESDLADAVKNAGPVSV 401

Query: 233 SINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY------------------------ 268
           +I+AS ++FQLY+ GIY D +C+S  ++H +L+VGY                        
Sbjct: 402 AIDASHNSFQLYSHGIYYDASCSSVNLDHGVLVVGYGSGTPDSDSRVHKGSQVRVKVPKT 461

Query: 269 --TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
             T+N WI+KN W   WGD G++Y+ +  +N CGIA+ A Y ++
Sbjct: 462 DDTKNYWIVKNSWGTSWGDKGFIYMSKDRDNNCGIASCASYPIV 505


>gi|116242316|gb|ABJ89815.1| putative cathepsin L preprotein [Clonorchis sinensis]
          Length = 371

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 156/309 (50%), Gaps = 23/309 (7%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           +KYK+ Y  K  + ++   +  N  +I  HN   ++G   Y++  N  SD       K  
Sbjct: 72  EKYKRVYDSKLEEERRLGIFTENFIRISEHNLLFEKGEVSYSMGINAFSD-------KTN 124

Query: 75  TRLTHSRIRRTLVRSPESNESVLI-----PDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           + L   R  R   ++  S    +      P  +DWR KG +TP  NQ DCG+C+AFS   
Sbjct: 125 SELDVLRGFRHSSKASRSGSQYIPFDAAPPAEVDWRTKGAVTPVKNQGDCGSCWAFSATG 184

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY- 188
            I+GQ + +T ++  LS QQ+VDCS  S N GC GG +     YV+   G+  E  YPY 
Sbjct: 185 GIEGQHYLATGKLVSLSEQQLVDCS--SSNDGCDGGLMDLAFEYVKEHKGIDTEVHYPYV 242

Query: 189 ---KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
               G    C F      V+++ +  +P   E  L+  +   GPI+V INA   +F  Y 
Sbjct: 243 SGNTGYARQCSFDPKYAAVNVTGYVDIPEGQELLLQQAVGFHGPISVGINAGLPSFMAYE 302

Query: 246 SGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGI 300
           SGIY D  C    ++H +L+VGY  ++    W++KN W   WG+NGY+ + R  NN CG+
Sbjct: 303 SGIYSDHRCNPHDLDHGVLVVGYGVDNGVPYWLIKNSWGEDWGENGYVRILRNHNNLCGV 362

Query: 301 ANYAVYALI 309
           A  A Y L+
Sbjct: 363 ATMASYPLM 371


>gi|10798513|emb|CAC12807.1| procathepsin L3 [Fasciola hepatica]
          Length = 306

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 157/305 (51%), Gaps = 16/305 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN    +GL  Y L  N  +DL        
Sbjct: 5   KRMYNKEY-NGADDEHRRNIWEQNAKHIEEHNLRHDRGLVTYKLGLNQFTDLTFEEFKAK 63

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+ ++ S +   +    E  +   +P  +DWR+ G++T   +Q  CG+C+AFS   
Sbjct: 64  YLMEMSPVSES-LSDGISYEAEGKD---VPASIDWRQYGYVTEVKDQGQCGSCWAFSPVG 119

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           AI+GQ  K        S QQ+VDC+   GN GC GG + N   Y++ + GL    DYPY+
Sbjct: 120 AIEGQYVKKFQNQTLFSEQQLVDCTRRFGNHGCGGGWMENAYKYLKNS-GLETASDYPYQ 178

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G +  C++++   V  ++    +   DE  L   +   GP A +++A P  F +Y SGI+
Sbjct: 179 GWEYQCQYRKELGVAKVTGAYTVHSGDEMKLMPMVRKKGPAAAAVDAQP-DFYMYESGIF 237

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
             + C+S  V HA+L VG+   S    WILKN W   WG++GYM   R   N C IA+ A
Sbjct: 238 QSQYCSSRRVTHAVLAVGHGTESGTDYWILKNSWGKWWGEDGYMRFARNRGNMCAIASVA 297

Query: 305 VYALI 309
              ++
Sbjct: 298 SVPMV 302


>gi|391333246|ref|XP_003741030.1| PREDICTED: digestive cysteine proteinase 2-like [Metaseiulus
           occidentalis]
          Length = 327

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 163/306 (53%), Gaps = 17/306 (5%)

Query: 15  KKYKKDYRKK---ATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           K YK  + K+     DS ++  ++ N   I+ HN     G   Y +  +  +D  P   I
Sbjct: 26  KLYKSVHDKRYAAGEDSVRRRIFERNVAMINAHNLLHDLGQVSYRMGLSRFTDATPEE-I 84

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLI---PDHLDWREKGFITPDWNQEDCGACYAFSIA 128
           + +T L  S    T   +  S +++ I    + +DWR+ G++TP  +Q  CG+C+AF+  
Sbjct: 85  RSLTCLNISDSTSTGKSNGNSFDTIDITELSEAVDWRQNGYVTPVKDQGKCGSCWAFAAT 144

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++GQ FK T ++  LS Q +VDC   S   GC GG    +  Y++  GG+  E  Y Y
Sbjct: 145 GAVEGQYFKKTGQLVSLSEQNLVDCDRSSD--GCEGGYFYESFEYIRSNGGIATESSYGY 202

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
           +     C+F   +I   +S    +   DE AL   +A++GPI+V+I+    TF+ Y+SG+
Sbjct: 203 EATAGSCRFTADSIGATVSGRDSVASGDEEALLKAVASIGPISVTIDV-IDTFRHYSSGV 261

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKR--GNNRCGIAN 302
           Y D  C+S   NHA+L+VGY   +    W++KN W   +G+ GY+ + R  GNN CGIA+
Sbjct: 262 YYDAECSSSSRNHAVLVVGYGTEAGGDYWLVKNSWGTSFGEQGYIKMARNKGNN-CGIAS 320

Query: 303 YAVYAL 308
            A Y +
Sbjct: 321 EAGYPI 326


>gi|33333700|gb|AAQ11968.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 15/300 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K YR    + ++   +Q N   I  HN++ ++G   +  +    +D+    ++  +    
Sbjct: 32  KTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFADMTHEEFLDLLKLQG 91

Query: 79  HSRIRRTLVRSPESNE-SVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFK 137
              +    V    S +  +   D +DWRE+G +TP  +Q +CG+C+AFS   AI+GQ FK
Sbjct: 92  VPALPSNAVHFDNSEDIDMEEKDAVDWREEGAVTPAKDQANCGSCWAFSAVGAIEGQFFK 151

Query: 138 STSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
               +  LS Q++VDC+    GN GC GG +    ++VQ   G+  EE YPY+G++S CK
Sbjct: 152 KNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ-DEGIQTEESYPYEGRRSSCK 210

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA-CT 255
            K    V  + ++  + P DE  +  T+A  GP+AV+I AS  +F  Y  GI D+   C+
Sbjct: 211 -KSGEYVTKVKTY--VFPLDEQEMARTVAAKGPVAVAIEASQLSF--YDKGIVDERCRCS 265

Query: 256 S--DYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           +  + +NH +L+VGY   +    WI+KN W   WG+ GY  LK+    CGI  Y  Y ++
Sbjct: 266 NKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIGYYNTYPIL 325


>gi|57282617|emb|CAE54306.1| putative papain-like cysteine proteinase [Gossypium hirsutum]
          Length = 373

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 155/307 (50%), Gaps = 30/307 (9%)

Query: 14  QKKYKKDY-RKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIK 72
           +K++KK Y  +K  D + K+ +Q N ++   H        HG T      SDL P  + K
Sbjct: 62  KKRFKKSYGSQKEHDYRFKI-FQVNLRRAARHQNLDPSATHGVT----QFSDLTPGEFRK 116

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
               L   R+ +    +P      L P   DWREKG +TP  NQ  CG+C++FS   A++
Sbjct: 117 AYLGLRRLRLPKDATEAPILPTDNL-PQDFDWREKGAVTPVKNQGSCGSCWSFSTTGALE 175

Query: 133 GQIFKSTSEIEELSIQQVVDC-------SIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           G  F +T ++  LS QQ+VDC          S + GC GG + +   Y   AGGLM+EED
Sbjct: 176 GANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREED 235

Query: 186 YPYKG-KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
           YPY G  +  CKF    +   ++++SV+   DE  +   L   GP+AV+INA     Q Y
Sbjct: 236 YPYTGTDRGTCKFDNTKVAAKVANFSVV-SLDEDQIAANLFKNGPLAVAINAV--FMQTY 292

Query: 245 ASGIYDDEACTSDYVNHAMLLVGY-----------TRNSWILKNWWSHHWGDNGYMYLKR 293
             G+     C S  ++H +LLVGY            +  WI+KN W  +WG+NG+  + R
Sbjct: 293 IGGVSCPYIC-SKRLDHGVLLVGYGSAGYAPVRMKDKPYWIIKNSWGENWGENGFYRICR 351

Query: 294 GNNRCGI 300
           G N CG+
Sbjct: 352 GRNICGV 358


>gi|300120790|emb|CBK21032.2| unnamed protein product [Blastocystis hominis]
          Length = 516

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 162/305 (53%), Gaps = 17/305 (5%)

Query: 15  KKYKKDYRKKATD---SKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           K++ KD +K   D    +++L++  N  ++   N E +     Y L+ NHL+D      +
Sbjct: 218 KQFVKDNKKCYNDVEYKERQLNFLRNKARVEKVNSENRS----YKLKLNHLADRSESE-L 272

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           + M  L  S+ ++       +  + + PD +DWREKG +TP  +Q  CG+C+ +     +
Sbjct: 273 RAMMGLKRSQ-KKDFAAHRYTPSNGVKPDFVDWREKGAVTPVKDQCMCGSCWTYGTVGVL 331

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP-YKG 190
           +GQ F    ++ + S Q ++DCS   GN GC GG       ++   GGLM +EDY  Y G
Sbjct: 332 EGQYFLKYGKLVKFSEQNLLDCSWNFGNDGCNGGEDFRAYGWMLHNGGLMTDEDYGHYLG 391

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
               C F +    V I+ + ++ P     L+  +A VGPI+V I A    F  YA G++D
Sbjct: 392 IDGWCHFNKSAAAVKITDYVLITPGSVEELEDAVANVGPISVGI-AVTTDFLFYAEGVFD 450

Query: 251 DEACTSDYVN--HAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYA 304
           +  C+S   +  HA+L VGY     ++ W++KN WS +WGDNGY+ + R NN CG+A  A
Sbjct: 451 NPECSSAVEDQAHAVLAVGYGTENGKDYWLIKNSWSTYWGDNGYVKIARKNNICGVATAA 510

Query: 305 VYALI 309
            Y ++
Sbjct: 511 SYPIL 515


>gi|395514296|ref|XP_003761355.1| PREDICTED: cathepsin L1-like [Sarcophilus harrisii]
          Length = 262

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 134/251 (53%), Gaps = 21/251 (8%)

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLD--------WREKGFI--TPDWNQEDCGACYAF 125
           RL H RI R     PE    V  P H          W + G +  T   ++  CG+C+AF
Sbjct: 16  RLRHRRITRHGDSDPE----VAPPLHRGRANGCDGRWDQAGSVRDTSIKDKGQCGSCWAF 71

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           S   +++GQ F  T ++  LS Q +VDCS   GN GC GG + N   YV+  GG+  EE 
Sbjct: 72  SATGSLEGQWFHKTGKLVSLSEQNLVDCSTAQGNSGCQGGLMDNAFEYVKKNGGIDTEES 131

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPY GK   C +       +++ +  +P   E AL   +ATVGPI+V+I+A   +FQ Y 
Sbjct: 132 YPYVGKDGTCHYNSQCSGANVTGYVDIPAGVERALAKAVATVGPISVAIDAGHSSFQFYR 191

Query: 246 SGIYDDEACTSDYVNHAMLLVGY------TRNSWILKNWWSHHWGDNGYMYLKRG-NNRC 298
           SG+Y +  C+S+ ++H +L+VG+       +  WI+KN W   WGD GY+ + R  NN C
Sbjct: 192 SGVYYEPECSSEELDHGVLVVGFGVEGKNGKKYWIVKNSWGEEWGDRGYVLMTRDHNNHC 251

Query: 299 GIANYAVYALI 309
           GIA  A Y  +
Sbjct: 252 GIATAASYPEV 262


>gi|13774082|gb|AAK38169.1| cathepsin L-like [Fasciola hepatica]
          Length = 310

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 155/310 (50%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W++N K I  HN     GL  YTL  N  +D+        
Sbjct: 9   KRMYNKEY-NGADDEHRRNIWEANVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 67

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 68  YLTEMPRASDILSHG--------IPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAF 119

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN GC+GG + N   Y+ QF  GL  E 
Sbjct: 120 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQF--GLETES 177

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++ R   V  ++ +  +    E  LK  + +  P A++++     F +Y
Sbjct: 178 SYPYTAVEGQCRYNRQLGVAKVTGYYTVHSGSEVELKNLVGSRRPAAIAVDVESD-FMMY 236

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
            SGIY  + C    +NHA+L VGY        WI+KN W   WG+ GY+ + R   N CG
Sbjct: 237 RSGIYQSQTCLPFALNHAVLAVGYGTQDGTDYWIVKNSWGLSWGERGYIRMARNRGNMCG 296

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 297 IASLASLPMV 306


>gi|195583145|ref|XP_002081384.1| GD10987 [Drosophila simulans]
 gi|194193393|gb|EDX06969.1| GD10987 [Drosophila simulans]
          Length = 352

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 153/289 (52%), Gaps = 24/289 (8%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM--------TRLTHSRIRRTLVRSPES 92
           I   N+ A  G+ G+ L  N L+D+  +     +         R T+  I     R+P S
Sbjct: 68  ITLSNKNADNGVSGFRLGVNTLADMTRKEIATLLGSKVSEFGERYTNGHINFVTARNPAS 127

Query: 93  NESVLIPDHLDWREKGFITPDWNQE-DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVV 151
                +P+  DWRE+G +TP   Q   CGAC++F+   A++G +F+ T  +  LS Q +V
Sbjct: 128 AN---LPEMFDWRERGGVTPPGFQGVGCGACWSFATTGALEGHLFRRTGVLASLSQQNLV 184

Query: 152 DCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK----FKRP--NIVVD 205
           DC+   GN+GC GG       Y++  G  +  + YPY   +  C+      RP    +V 
Sbjct: 185 DCADDYGNMGCDGGFQEYGFEYIRDHGVTLANK-YPYTQTEMQCRQNETAGRPPRESLVK 243

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
           I  ++ + P DE  +K  +AT+GP+A S+NA   +F+ Y+ GIY+DE C    +NH++ +
Sbjct: 244 IRDYATITPGDEEKMKEVIATLGPLACSMNADTISFEQYSGGIYEDEECNQGELNHSVTV 303

Query: 266 VGY----TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAVYALI 309
           VGY     R+ WI+KN +S +WG+ G+M  L+     CGIA+   Y ++
Sbjct: 304 VGYGTENGRDYWIIKNSYSQNWGEGGFMRILRNAGGFCGIASECSYPIL 352


>gi|340380715|ref|XP_003388867.1| PREDICTED: pro-cathepsin H-like [Amphimedon queenslandica]
          Length = 347

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 150/303 (49%), Gaps = 28/303 (9%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH------YIKEMTRLTHSRIRRTLV 87
           W   HKK +   +E    L  YT    ++  L+  H       + +   LT +  +R  +
Sbjct: 46  WTIKHKKTYATAEEYNWRLRVYTANHYYVKRLNEGHGPATEFELNQFADLTFAEFKRIYL 105

Query: 88  RS--------------PESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
            S              P    +V  P  +DWR++  ITP  +Q  CG+C+AFS  S +  
Sbjct: 106 SSSSQHCRATTGNFQMPVKKNNVEDPVAIDWRKRNVITPVRDQGSCGSCWAFSATSCLSA 165

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
            +   T ++  LS QQ++DCS    N GC GG       Y+++ GG+  E DYPYK ++ 
Sbjct: 166 HLALKTGQLISLSKQQLLDCSRSFNNRGCKGGLPSQAFEYIRYNGGIESERDYPYKDREE 225

Query: 194 ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253
            C FK   +   ++         E  + V LA +GP+++ I+ S  +F  Y  GIY  + 
Sbjct: 226 KCHFKPSLVAATVTGVVNFTQGAEDDIAVALANIGPVSIGIH-STKSFATYKKGIYQGKL 284

Query: 254 CTSD--YVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306
           C+ +   +NHA+L+VGY + +     WI KN W  +WG NGY +++RG+N CG+A  A Y
Sbjct: 285 CSKNPRKINHAVLIVGYDQTASGEKYWIGKNSWGTNWGMNGYFWIRRGHNACGLATCASY 344

Query: 307 ALI 309
            ++
Sbjct: 345 PVV 347


>gi|37732137|gb|AAR02406.1| cysteine proteinase [Anthonomus grandis]
          Length = 322

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 153/292 (52%), Gaps = 12/292 (4%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K YR +  + ++   +++N  +I  HN   +QGL  Y    N  +DL    +   +    
Sbjct: 35  KSYRNQVEEVQRFNIFRANVLEIEQHNALYEQGLVSYKKAINQFTDLTQEEFKAYLGLHV 94

Query: 79  HSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKS 138
              +  T+    +  E   +P  +DWR  G +T   NQ  CG+C++F++  + +G  ++ 
Sbjct: 95  KPVLNNTIQYELKGLE---VPTSVDWRSAGQVTGVKNQGSCGSCWSFALTGSTEGAYYRK 151

Query: 139 TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFK 198
             ++  LS QQ+VDCS  S N GC GG L  T  Y++   GL  E  YPY G    CK+ 
Sbjct: 152 HKQLVSLSEQQLVDCS-TSINYGCNGGFLDATFPYIE-QYGLQTESSYPYTGVDGSCKYD 209

Query: 199 RPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDY 258
              +V  IS++  L   +   L+  + ++GP+A++++AS      Y+SGIY    CT+  
Sbjct: 210 SSKVVTKISNYVSLHGSESKVLE-PVGSIGPVAITMDAS--YLSSYSSGIYAANKCTTTN 266

Query: 259 VNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306
           +NHA+L+VGY     +N WI+KN W   WG+ GY  L RG+N CG A   VY
Sbjct: 267 LNHAVLVVGYGSQNGQNYWIVKNSWGSGWGEQGYFRLLRGSNECGCAQDPVY 318


>gi|157862755|gb|ABV90500.1| cathepsin L, partial [Fasciola gigantica]
          Length = 251

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/249 (38%), Positives = 137/249 (55%), Gaps = 19/249 (7%)

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H    R   R+        +P  +DWRE G++T   +Q  CG+C+AF
Sbjct: 9   YLSEMPRASAFLSHGMPYRAKNRA--------VPTSIDWRESGYVTEVKDQGGCGSCWAF 60

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185
           S   A++GQ  KS       S QQ+VDCS   GN GC+GG +     Y++   GL  E  
Sbjct: 61  STTGAMEGQYMKSQRINISFSEQQLVDCSGDFGNHGCSGGLMEKAYEYLRHF-GLETESS 119

Query: 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYA 245
           YPY+  +  C++ +   V  +S + ++  QDE ALK  +   GP AV+++ +   F +Y 
Sbjct: 120 YPYRADEGPCQYDKQLGVAQLSDYYIVHSQDEVALKNLIGVEGPAAVALDVNI-DFMMYK 178

Query: 246 SGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGI 300
           SGIY DE C+S Y+NHA+L VGY        WI+KN W   WG++GY+ L R  +N CGI
Sbjct: 179 SGIYQDEICSSRYLNHALLAVGYGTEDGTEYWIVKNSWGSRWGEHGYIRLARNRDNMCGI 238

Query: 301 ANYAVYALI 309
           A  A   ++
Sbjct: 239 ATLASLPIV 247


>gi|163310848|pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola
           Hepatica
          Length = 310

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 155/306 (50%), Gaps = 18/306 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +D+        
Sbjct: 9   KRMYNKEY-NGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 67

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+R   S I    V    +N +V  PD +DWRE G++T   +Q +CG+ +AFS   
Sbjct: 68  YLTEMSRA--SDILSHGVPYEANNRAV--PDKIDWRESGYVTEVKDQGNCGSGWAFSTTG 123

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPY 188
            ++GQ  K+       S QQ+VDCS   GN GC GG + N   Y+ QF  GL  E  YPY
Sbjct: 124 TMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMENAYQYLKQF--GLETESSYPY 181

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
              +  C++ +   V  ++ +  +    E  LK  +   GP AV+++     F +Y SGI
Sbjct: 182 TAVEGQCRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESD-FMMYRSGI 240

Query: 249 YDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANY 303
           Y  + C+   VNHA+L VGY        WI+KN W   WG+ GY+ + R   N CGIA+ 
Sbjct: 241 YQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASL 300

Query: 304 AVYALI 309
           A   ++
Sbjct: 301 ASLPMV 306


>gi|156367164|ref|XP_001627289.1| predicted protein [Nematostella vectensis]
 gi|156214194|gb|EDO35189.1| predicted protein [Nematostella vectensis]
          Length = 514

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 154/297 (51%), Gaps = 20/297 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           Q ++ K Y  +   SK+K  ++ N + I + N++  +    Y L  NH  DL    Y + 
Sbjct: 224 QGQHNKQYDSEHEVSKRKHIFRHNMRYIRSINRKNLK----YKLAPNHFVDLTDGEYDQ- 278

Query: 74  MTRLTHSRIRRTLVRSPESNES-----VLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
                H       +  P SN S     V +PD LDWR+ G ++P   Q  CG+CYA +  
Sbjct: 279 -----HKGDSIITLYGPYSNMSHVLQRVDVPDELDWRDYGAVSPVRGQGICGSCYALAAV 333

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            A++G  F  T +++ELS QQV+DCS  SGN GC GG     ++++   G    E   PY
Sbjct: 334 GAVEGAYFMKTGKLKELSAQQVIDCSWGSGNRGCKGGYYNKAMSWIYLHGIASAESYGPY 393

Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            G++  C+ +       I +++ +P  +  ALK+++A  GP  VSIN +P + + Y+ G+
Sbjct: 394 LGQEGTCRIEGLRRAAAIDAFAFVPKYNNTALKISVARFGPAVVSINENPLSLKFYSWGL 453

Query: 249 YDDEACTSDYVN-HAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGI 300
           YDD  C  D    H++L+VGY        W++KN WS  WG +GY+ +    N CG+
Sbjct: 454 YDDPECGRDTAAVHSVLVVGYGVEDGEPYWLVKNSWSTTWGMDGYIKIAWKRNTCGV 510


>gi|195455847|ref|XP_002074892.1| GK22908 [Drosophila willistoni]
 gi|194170977|gb|EDW85878.1| GK22908 [Drosophila willistoni]
          Length = 381

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 151/304 (49%), Gaps = 10/304 (3%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           ++  K Y   A  + ++  ++ +   + + N     G   +T   N  SDL    ++K++
Sbjct: 79  QQTGKTYASAAEQALRQGVFEGSQNLVDSANAAFAAGTSTFTSAVNAFSDLTHLEFLKQL 138

Query: 75  TRLTHS---RIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           T    S     R    R      +  IPD  DWREKG +TP  +Q  CG+C+ F+   AI
Sbjct: 139 TGFKKSAEGESRVAAARQAVEVPAEPIPDSFDWREKGGVTPVKHQGTCGSCWTFAATGAI 198

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNL-GCAGGSLRNTLNYVQFAG-GLMKEEDYPYK 189
           +G +F+ T+++  LS Q +VDC  ++  L GC GG       +++ A  G+  E  Y Y 
Sbjct: 199 EGHLFRKTNQLPNLSEQNLVDCGPLNFGLNGCDGGCQEYAFAFLKEAQRGIASEAKYTYV 258

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
            K+ +C +        +   + + P DE  LK  +AT+GP+  S+ A       Y  GI+
Sbjct: 259 DKRDVCSYTEKQAEAYVHGLATVTPNDEDLLKKVVATLGPVGCSLFADEALLH-YEKGIF 317

Query: 250 DDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAV 305
            +E C    +NHA+L+VGY     ++ W +KN W  +WG++GY  L RG N CGI+    
Sbjct: 318 SNETCNGQELNHAVLVVGYGSENGQDYWTIKNSWGENWGESGYFRLIRGQNFCGISLECS 377

Query: 306 YALI 309
           Y ++
Sbjct: 378 YPIV 381


>gi|381283083|gb|AFG19440.1| cathepsin L, partial [Larimichthys crocea]
          Length = 257

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 137/258 (53%), Gaps = 15/258 (5%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT---RLTHSRIRRTLVRSP 90
           W+ N +KI  HN E   G H Y L  NH  D+    + + M    R    + + +L   P
Sbjct: 3   WEMNLRKIELHNLEHSMGKHSYRLGMNHFGDMTHEEFRQIMNGYKRKAEGKFKGSLFMEP 62

Query: 91  ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQV 150
              E+   P  +DWR+ G++TP  +Q  CG+C+AFS   A++GQ F+ T ++  LS Q +
Sbjct: 63  NFLEA---PRAVDWRDNGYVTPVKDQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNL 119

Query: 151 VDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI-VVDISSW 209
           VDCS   GN GC GG +     YV+   GL  E+ YPY G         PN    + + +
Sbjct: 120 VDCSRPEGNEGCNGGLMDQAFQYVKDNHGLDSEDSYPYLGTDDQPCHYDPNYNSANDTGF 179

Query: 210 SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY- 268
             +P   EHAL   +A VGP++V+I+A   +FQ Y SGIY ++ C+S+ ++H +L+VGY 
Sbjct: 180 VDVPSGKEHALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKDCSSEELDHGVLVVGYG 239

Query: 269 -------TRNSWILKNWW 279
                   +  WI+ N W
Sbjct: 240 FEGEDVDGKKYWIVNNSW 257


>gi|195334168|ref|XP_002033756.1| GM21493 [Drosophila sechellia]
 gi|194125726|gb|EDW47769.1| GM21493 [Drosophila sechellia]
          Length = 352

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 154/289 (53%), Gaps = 24/289 (8%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHY-------IKEM-TRLTHSRIRRTLVRSPES 92
           I   N+ A  G+ G+ L  N L+D+  +         + E   R T+  I     R+P S
Sbjct: 68  ITLSNKNADNGVTGFRLGVNTLADMTRKEISTLLGSKVSEFGERYTNGHINFVTARNPAS 127

Query: 93  NESVLIPDHLDWREKGFITPDWNQE-DCGACYAFSIASAIQGQIFKSTSEIEELSIQQVV 151
                +P+  DWRE+G +TP   Q   CGAC++F+   A++G +F+ T  +  LS Q +V
Sbjct: 128 AN---LPEMFDWRERGGVTPPGFQGVGCGACWSFATTGALEGHLFRRTGVLASLSQQNLV 184

Query: 152 DCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK----FKRP--NIVVD 205
           DC+   GN+GC GG       Y++  G  +  + YPY   +  C+      RP    +V 
Sbjct: 185 DCADDYGNMGCDGGFQEYGFEYIRDHGVTLANK-YPYTQTEMQCRQNETAGRPPRESLVK 243

Query: 206 ISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265
           I  ++ + P DE  +K  +AT+GP+A S+NA   +F+ Y+ GIY+DE C    +NH++ +
Sbjct: 244 IRDYATITPGDEEKMKEVIATLGPLACSMNADTISFEQYSGGIYEDEECNQGELNHSVTV 303

Query: 266 VGY----TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAVYALI 309
           VGY     R+ WI+KN +S +WG+ G+M  L+     CGIA+   Y ++
Sbjct: 304 VGYGTENGRDYWIIKNSYSQNWGEGGFMRILRNAGGFCGIASECSYPIL 352


>gi|334314327|ref|XP_001368532.2| PREDICTED: cathepsin H-like [Monodelphis domestica]
          Length = 344

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 148/287 (51%), Gaps = 15/287 (5%)

Query: 30  KKLH-WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVR 88
           ++LH + +N ++I  HN     G H YTL  N  SD+    + K+   L       +  +
Sbjct: 62  RRLHNFLNNKRRIDEHNA----GKHSYTLGLNQFSDMSFDEFKKQY--LMSEPQNCSATK 115

Query: 89  SPESNESVLIPDHLDWREKG-FITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSI 147
                     PD +DWR+KG +++P  NQ  CG+C+ FS    ++  +  +T ++  L+ 
Sbjct: 116 GSHVRRVGPYPDFMDWRKKGNYVSPVKNQGGCGSCWTFSTTGGLESAVAIATGKLLSLAE 175

Query: 148 QQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDIS 207
           QQ+VDC+    N GC GG       Y+ +  G+M E+ YPY+GK   C+FK    +  + 
Sbjct: 176 QQLVDCAQAFNNHGCNGGLPSQAFEYIMYNNGIMGEDTYPYEGKDGTCRFKPDKAIAFVK 235

Query: 208 SWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC--TSDYVNHAMLL 265
               +   DE A+   +A   P++ +   +   F  Y  GIY +  C  + D VNHA+L 
Sbjct: 236 DVVNITIYDEEAMTEAVAHHNPVSFAFEVT-EDFMSYRDGIYSNPRCDKSPDKVNHAVLA 294

Query: 266 VGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308
           VGY +N+    WI+KN W   WG+NGY  ++RG N CG+A+ A Y +
Sbjct: 295 VGYGKNNGILYWIVKNSWGTSWGNNGYFLIERGKNMCGLADCASYPV 341


>gi|224077886|ref|XP_002305451.1| predicted protein [Populus trichocarpa]
 gi|222848415|gb|EEE85962.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 156/310 (50%), Gaps = 28/310 (9%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   + K+KK Y  +     +   +++N ++   H +      HG T      SDL P  
Sbjct: 53  FSLFKSKFKKSYGSQEEHDYRFSVFKANLRRAARHQELDPTASHGVT----QFSDLTPAE 108

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           + K++  L   R+ +    +P    S L P+  DWR+KG + P  NQ  CG+C++FS   
Sbjct: 109 FRKQVLGLRRLRLPKDANEAPILPTSDL-PEDFDWRDKGAVGPIKNQGSCGSCWSFSATG 167

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCS-------IISGNLGCAGGSLRNTLNYVQFAGGLMK 182
           A++G  F +T E+  LS QQ+VDC          S + GC GG + +   Y   AGGLM+
Sbjct: 168 ALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 227

Query: 183 EEDYPYKG-KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTF 241
           EEDYPY G  +  CKF +  +   ++++SV+   DE  +   L   GP+AV+INA     
Sbjct: 228 EEDYPYTGTDRDACKFDKNKVAARVANFSVV-SLDEDQIAANLVKNGPLAVAINAV--FM 284

Query: 242 QLYASGIYDDEACTSDYVNHAMLLVGY-----------TRNSWILKNWWSHHWGDNGYMY 290
           Q Y  G+     C S  ++H +LLVGY            +  WI+KN W   WG+NG+  
Sbjct: 285 QTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYSPVRMKEKPFWIIKNSWGEKWGENGFYK 343

Query: 291 LKRGNNRCGI 300
           + RG N CG+
Sbjct: 344 ICRGRNVCGV 353


>gi|123492185|ref|XP_001326005.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121908913|gb|EAY13782.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 305

 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 149/279 (53%), Gaps = 19/279 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W SN + +  HN+       G+T+  N L+ L P  Y      L   R+ +   ++ +SN
Sbjct: 34  WLSNKRLVQEHNRANL----GFTVALNKLAHLTPAEY----NSLLGFRMNKAERKAVKSN 85

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
              +     DWR+KG + P  +Q  CG+C+AFS   A + Q + S   ++ LS Q +VDC
Sbjct: 86  --AIANADCDWRKKGAVNPIKDQGQCGSCWAFSAIQAQESQYYISFKTLQSLSEQNLVDC 143

Query: 154 SIISGNLGCAGGSLRNTLNYV--QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
             ++   GC GG +    +YV    +G  M E DYPY  +   CKF        I S+  
Sbjct: 144 --VTTCYGCNGGLMDAAYDYVVKHQSGKFMTEADYPYTARDGSCKFNAAKGTSQIKSYVN 201

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--- 268
           +   DE  L   ++T+GP A++I+AS  +FQLY+SGIYD+ AC+S  ++H +  VGY   
Sbjct: 202 VAEGDEKDLATKVSTLGPAAIAIDASAWSFQLYSSGIYDESACSSYNLDHGVGCVGYGTE 261

Query: 269 -TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAV 305
            ++N WI++N W   WG+ GY+  +K  NN+CG A  A 
Sbjct: 262 GSKNYWIVRNSWGTAWGEKGYIRMIKDKNNQCGEATMAC 300


>gi|321477694|gb|EFX88652.1| hypothetical protein DAPPUDRAFT_304724 [Daphnia pulex]
          Length = 336

 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 164/303 (54%), Gaps = 20/303 (6%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+KK ++ K  +  +K  +  N++ I  HNQ    G   Y L+ N  +D        E
Sbjct: 39  KAKHKKRFKNKDREKMRKNTFVENNRGIKKHNQ---AGKSTYKLQPNQFADWSE----AE 91

Query: 74  MTRLTHSRIRRTLVRSPESNESVL---IPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           + +L         + +P  +  +L   +PD +D+R+   +     Q  CG+CY F+  + 
Sbjct: 92  LEQLKGEIDTDNEIPAPVVSGDILRQAVPDAVDYRKSHCLAKVKYQGGCGSCYTFASTTP 151

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKG 190
           I+ Q    T  +  LS + ++DCS   GN GC GG    + NYV+   GL  EE YPY+G
Sbjct: 152 IEYQRCMKTGTLVTLSEENLIDCSQKYGNAGCNGGLALRSWNYVKDV-GLNTEEAYPYQG 210

Query: 191 KQSICKFKRPNIVVDISSWS-VLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           ++++C++   N   ++++W+      DE A+KV +A  GP+AVS++AS   +  Y+SGI+
Sbjct: 211 EETMCEYSASNYGGNVTTWAYATRTNDEEAIKVVVAKYGPVAVSVDAS--NWDFYSSGIF 268

Query: 250 DDEACTSDYVNHAMLLVGYTRNS------WILKNWWSHHWGDNGYMYLKRGNNRCGIANY 303
               C++   NHA+++VGY +++      WI++N W   WG+ GY+ L+RG N C I+  
Sbjct: 269 SSPTCSNTTTNHAVVIVGYGKDTKTRKDFWIVRNSWGPEWGEGGYINLERGVNMCAISKR 328

Query: 304 AVY 306
           AV+
Sbjct: 329 AVF 331


>gi|56567186|gb|AAV98582.1| cathepsin L-like cysteine proteinase precursor [Trichomonas
           vaginalis]
          Length = 305

 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 149/279 (53%), Gaps = 19/279 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W SN + +  HN+       G+T+  N L+ L P  Y      L   R+ +   ++ +SN
Sbjct: 34  WLSNKRLVQEHNRANL----GFTVALNKLAHLTPAEY----NSLLGFRMNKAERKAVKSN 85

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
              +     DWR+KG + P  +Q  CG+C+AFS   A + Q + S   ++ LS Q +VDC
Sbjct: 86  --AIANADCDWRKKGAVNPIKDQGQCGSCWAFSAIQAQESQYYISFKTLQSLSEQNLVDC 143

Query: 154 SIISGNLGCAGGSLRNTLNYV--QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
             ++   GC GG +    +YV    +G  M E DYPY  +   CKF        I S+  
Sbjct: 144 --VTTCYGCNGGLMDAAYDYVVKHQSGKFMTEADYPYTARDGSCKFNAAKGTSQIKSYVN 201

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--- 268
           +   DE  L   ++T+GP A++I+AS  +FQLY+SGIYD+ AC+S  ++H +  VGY   
Sbjct: 202 VAEGDEKDLATKVSTLGPAAIAIDASAWSFQLYSSGIYDESACSSYNLDHGVGCVGYGTE 261

Query: 269 -TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAV 305
            ++N WI++N W   WG+ GY+  +K  NN+CG A  A 
Sbjct: 262 GSKNYWIVRNSWGTTWGEKGYIRMIKDKNNQCGEATMAC 300


>gi|123455797|ref|XP_001315639.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121898322|gb|EAY03416.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 305

 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/278 (36%), Positives = 149/278 (53%), Gaps = 19/278 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W SN + +  HN+       G+TL  N L+ L P  Y K M    +  +    ++S    
Sbjct: 34  WLSNKRFVQNHNRANL----GFTLALNKLAYLSPTEY-KAMLGFHNKGVHNIAIKS---- 84

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
            + +  D +DWR KG + P  +Q+ CG+C+AFS   A + Q   +  ++++LS Q +VDC
Sbjct: 85  -NTIANDEIDWRSKGVVNPIQHQQHCGSCWAFSAIQAQESQYAITYGKLQKLSEQNLVDC 143

Query: 154 SIISGNLGCAGGSLRNTLNYV-QFAGG-LMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
            + S N GC  G +    +YV Q+ GG  M E DYPY   +  CKF +      I S+  
Sbjct: 144 -VTSCN-GCHNGLMSAAYDYVIQYQGGKFMLETDYPYTAVEGTCKFNQAKATSKIVSYIN 201

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--- 268
           +   DE  L   ++  GP  V I+AS +TFQLY+ GIYD+  C+S  +NH +  VGY   
Sbjct: 202 VVEGDEKDLAAKVSAYGPSTVGIDASHYTFQLYSHGIYDEPHCSSFSLNHGVGCVGYGTE 261

Query: 269 -TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYA 304
            T+N WI++N W   WG+ GY+  +K  NN CGIA  A
Sbjct: 262 GTKNYWIVRNSWGLEWGEQGYVRMIKDKNNNCGIATVA 299


>gi|13242027|gb|AAK16514.1|AF331036_1 cathepsin L-like cysteine proteinase [Onchocerca volvulus]
          Length = 401

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/286 (36%), Positives = 147/286 (51%), Gaps = 19/286 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRL-----THSRIRR---- 84
           ++SN       N++ +QGL  YT   NHL+DL  + + K M  L     TH R RR    
Sbjct: 116 FESNELMTEATNRKYEQGLISYTNGLNHLADLTDKKF-KMMNGLRFPNETHLRTRRQTRH 174

Query: 85  TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEE 144
           T+ +    + +  +P  +DWR+KG +TP  NQ  CG+CYAF+   A++    K T ++ +
Sbjct: 175 TVGQKYTYDPNEKLPVSVDWRKKGMVTPVKNQGVCGSCYAFAAIGALEAYNKKKTGKLVD 234

Query: 145 LSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVV 204
           LSIQ  VDC+   GN GC GG + N + Y     GL  E +    G +  CK++  N   
Sbjct: 235 LSIQNAVDCTWTLGNYGCRGGYM-NPIFYYATKFGLAMESEISVLGTEQKCKWQEENAYA 293

Query: 205 DISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAML 264
               ++ +   DE  L   +A  GP+ V IN S   F+ Y SG+Y +  C    +NHA+L
Sbjct: 294 TDKGYAAIQRGDELGLMHAVAKHGPVVVGINGSKRPFKFYKSGVYSNRDCGD--LNHAVL 351

Query: 265 LVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
           LVGY ++      WI+KN W   WG  GY Y+ R   N C IA  A
Sbjct: 352 LVGYGKHKTYGEYWIIKNSWGTDWGKKGYAYMARNKGNMCHIATLA 397


>gi|454890|emb|CAA54438.1| cysteine proteinase, putative [Trichomonas vaginalis]
          Length = 292

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 149/279 (53%), Gaps = 19/279 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W SN + +  HN+       G+T+  N L+ L P  Y      L   R+ +   ++ +SN
Sbjct: 21  WLSNKRLVQEHNRAN----LGFTVALNKLAHLTPAEY----NSLLGFRMNKAERKAVKSN 72

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
              +     DWR+KG + P  +Q  CG+C+AFS   A + Q + S   ++ LS Q +VDC
Sbjct: 73  --AIANADCDWRKKGAVNPIKDQGQCGSCWAFSAIQAQESQYYISFKTLQSLSEQNLVDC 130

Query: 154 SIISGNLGCAGGSLRNTLNYV--QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
             ++   GC GG +    +YV    +G  M E DYPY  +   CKF        I S+  
Sbjct: 131 --VTTCYGCNGGLMDAAYDYVVKHQSGKFMTEADYPYTARDGSCKFNAAKGTSQIKSYVN 188

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--- 268
           +   DE  L   ++T+GP A++I+AS  +FQLY+SGIYD+ AC+S  ++H +  VGY   
Sbjct: 189 VAEGDEKDLATKVSTLGPAAIAIDASAWSFQLYSSGIYDESACSSYNLDHGVGCVGYGTE 248

Query: 269 -TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAV 305
            ++N WI++N W   WG+ GY+  +K  NN+CG A  A 
Sbjct: 249 GSKNYWIVRNSWGTAWGEKGYIRMIKDKNNQCGEATMAC 287


>gi|33333704|gb|AAQ11970.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 162/301 (53%), Gaps = 17/301 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K YR    + ++   +Q N   I  HN++ ++G   +  +    +D+    ++ ++ +L 
Sbjct: 32  KTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFADMTHEEFL-DLLKLQ 90

Query: 79  HSRIRRTLVRSPESNESVLIP--DHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
                 +     ++ E + +   D +DWRE+G +TP  +Q +CG+C+AFS   AI+GQ F
Sbjct: 91  GVPALPSNAVHFDNFEDIDMEEKDAIDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFF 150

Query: 137 KSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           K    +  LS Q++VDC+    GN GC GG +    ++VQ   G+  EE YPY+G++S C
Sbjct: 151 KKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ-DEGIQTEESYPYEGRRSSC 209

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA-C 254
           K K    V  + ++  + P DE  +  T+A  GP+AV+I AS  +F  Y  GI D+   C
Sbjct: 210 K-KSGEYVTKVKTY--VFPLDEQEMARTVAAKGPVAVAIEASQLSF--YDKGIVDERCRC 264

Query: 255 TS--DYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308
           ++  + +NH +L+VGY   +    WI+KN W   WG+ GY  LK+    CGI  Y  Y +
Sbjct: 265 SNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIGTYNTYPV 324

Query: 309 I 309
           +
Sbjct: 325 L 325


>gi|123438675|ref|XP_001310117.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121891873|gb|EAX97187.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 305

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 149/279 (53%), Gaps = 19/279 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W SN + +  HN+       G+T+  N L+ L P  Y K +     ++  R +V+S    
Sbjct: 34  WLSNKRLVQEHNRANL----GFTVALNKLAHLTPAEY-KSLLGFRMNKAERKVVKS---- 84

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
            + +     DWR++G + P   Q  CG+C+AFS   A + Q + +   ++ LS Q +VDC
Sbjct: 85  -NAIANADCDWRKEGAVNPIKGQGQCGSCWAFSAIQAQESQYYIAFKNLQSLSEQNLVDC 143

Query: 154 SIISGNLGCAGGSLRNTLNYV--QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
             ++   GC GG +    +YV    +G  M E DYPY  +   CKF        I S+  
Sbjct: 144 --VTTCYGCNGGLMDAAYDYVINHQSGKFMTEADYPYTARDGSCKFNAAKGTSQIKSYVN 201

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--- 268
           +   DE  L   ++T+GP A++I+AS  +FQLY+SGIYD+ AC+S  ++H +  VGY   
Sbjct: 202 VAEGDEKDLATKVSTLGPAAIAIDASAWSFQLYSSGIYDESACSSYNLDHGVGCVGYGTE 261

Query: 269 -TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAV 305
            ++N WI++N W   WG+ GY+  +K  NN+CG A  A 
Sbjct: 262 GSKNYWIVRNSWGTSWGEKGYIRMIKDKNNQCGEATMAC 300


>gi|224069140|ref|XP_002326284.1| predicted protein [Populus trichocarpa]
 gi|118482340|gb|ABK93094.1| unknown [Populus trichocarpa]
 gi|222833477|gb|EEE71954.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  168 bits (425), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 148/294 (50%), Gaps = 10/294 (3%)

Query: 22  RKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSR 81
           ++  T+ + KL +    + +       ++GL  YTL  N  +D   + + K   RL  ++
Sbjct: 67  KRYETEGEMKLRFAIFSESLDLIRSTNKKGLP-YTLGLNQFADWTWQEFQK--YRLGAAQ 123

Query: 82  IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSE 141
                 R      + L+P+  DWRE+G ++P  NQ  CG+C+ FS   A++    ++  +
Sbjct: 124 NCSATTRGNHKLTNALLPETKDWREEGIVSPVKNQGHCGSCWTFSTTGALEAAYHQAFGK 183

Query: 142 IEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPN 201
              LS QQ+VDC+    N GC GG       Y++F GGL  EE YPY GK   CKF   N
Sbjct: 184 GISLSEQQLVDCARAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKDDACKFSSEN 243

Query: 202 IVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDY--V 259
           + V +     +    E  LK  +A V P++V+      +F+LY  G+Y    C S    V
Sbjct: 244 VGVRVVESVNITLGAEDELKHAVAFVRPVSVAFEVV-GSFRLYKEGVYTTSTCGSTPMDV 302

Query: 260 NHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           NHA+L VGY   +    W++KN W   WGDNGY  ++ G N CGIA  A Y ++
Sbjct: 303 NHAVLAVGYGVENGIPYWLIKNSWGEDWGDNGYFKMEMGKNMCGIATCASYPVV 356


>gi|242061538|ref|XP_002452058.1| hypothetical protein SORBIDRAFT_04g017830 [Sorghum bicolor]
 gi|241931889|gb|EES05034.1| hypothetical protein SORBIDRAFT_04g017830 [Sorghum bicolor]
          Length = 371

 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 165/319 (51%), Gaps = 38/319 (11%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F+   +++ K Y+     + +   +++N ++   H        HG T      SDL P  
Sbjct: 48  FLSFVQRFGKSYKDAEEHAYRLSIFKANLRRARRHQLLDPSAEHGVT----KFSDLTPAE 103

Query: 70  YIKEMTRLTHSRIRRTLVR--SPESNESVLIP-----DHLDWREKGFITPDWNQEDCGAC 122
           + +  T L   + RR L+R     +NE+ ++P     D  DWR+ G +TP  NQ  CG+C
Sbjct: 104 FRR--TYLGLRKSRRALLRELGKSANEAPVLPTDGLPDDFDWRDHGAVTPVKNQGSCGSC 161

Query: 123 YAFSIASAIQGQIFKSTSEIEELSIQQVVDCSII-------SGNLGCAGGSLRNTLNYVQ 175
           ++FS + A++G  + +T ++E LS QQ+VDC  +       S + GC GG + N  +Y+Q
Sbjct: 162 WSFSTSGALEGAHYLATGKLEVLSEQQMVDCDHVCDTSEPDSCDSGCNGGLMTNAFSYLQ 221

Query: 176 FAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSIN 235
            AGGL  E+DYPY G    CKF +  IV  + ++SV+   DE  +   L   GP+A+ IN
Sbjct: 222 KAGGLESEKDYPYTGSDDKCKFDKSKIVASVQNFSVV-SVDEGQIAANLIKHGPLAIGIN 280

Query: 236 ASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----------TRNSWILKNWWSHHWG 284
           A+    Q Y  G+     C    ++H +LLVGY            +  WI+KN W  +WG
Sbjct: 281 AA--YMQTYIGGVSCPYIC-GRTLDHGVLLVGYGAAGFAPIRLKDKPYWIIKNSWGENWG 337

Query: 285 DNGYMYLKRGN---NRCGI 300
           +NGY  + RG+   N+CG+
Sbjct: 338 ENGYYKICRGSNVRNKCGV 356


>gi|118481169|gb|ABK92536.1| unknown [Populus trichocarpa]
          Length = 368

 Score =  167 bits (424), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 158/312 (50%), Gaps = 32/312 (10%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   ++K+KK Y  +     +   ++SN ++   H +      HG T      SDL    
Sbjct: 53  FSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVT----QFSDLTSAE 108

Query: 70  YIKEMTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
           + K++  L   R+ +    +P   +N+   +P+  DWREKG + P  NQ  CG+C++FS 
Sbjct: 109 FRKQVLGLRKLRLPKDANTAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSFST 165

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDC-------SIISGNLGCAGGSLRNTLNYVQFAGGL 180
             A++G  F +T E+  LS QQ+VDC          S + GC GG + +   Y   AGGL
Sbjct: 166 TGALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 225

Query: 181 MKEEDYPYKG-KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
           M+EEDYPY G  +  CKF +  +   ++++SV+   DE  +   L   GP+AV+INA   
Sbjct: 226 MREEDYPYTGMDRGACKFDKNKVAAGVANFSVV-SLDEDQIAANLVKNGPLAVAINAV-- 282

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHWGDNGY 288
             Q Y  G+     C S  ++H +LLVGY   +           WI+KN W   WG+NG+
Sbjct: 283 FMQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAAYAPVRMKEKPYWIIKNSWGESWGENGF 341

Query: 289 MYLKRGNNRCGI 300
             + RG N CG+
Sbjct: 342 YKICRGRNICGV 353


>gi|158148921|dbj|BAF81994.1| cysteine proteinase [Platycodon grandiflorus]
          Length = 359

 Score =  167 bits (424), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 150/300 (50%), Gaps = 13/300 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +Y K Y       ++   +  + K I +HN+   +GL  YTL  N  +DL    + K   
Sbjct: 66  RYGKSYETAEEMKRRFSIFVDSLKMIRSHNK---KGLS-YTLGVNEFADLTWEEFRKH-- 119

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           RL  ++     ++      + L+P   DWRE G +TP  NQ  CG+C+ FS   A++   
Sbjct: 120 RLGAAQNCSATLKGNHKLTNGLLPLKKDWREVGIVTPVKNQGHCGSCWTFSTTGALEAAY 179

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
            ++  +   LS QQ+VDC+    N GC GG       Y++  GGL  EE YPY G   +C
Sbjct: 180 VQAFGKAIFLSEQQLVDCARAYNNFGCNGGLPSQAFEYIKANGGLDTEEAYPYTGVDGVC 239

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC- 254
           KF   NI V +     +    E  LK  +A V P++V+       F+LY SG+Y  + C 
Sbjct: 240 KFSSENIGVQVLDSVNITLGAEDELKDAVAFVRPVSVAFEVVSG-FRLYKSGVYTSDTCG 298

Query: 255 -TSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
            T   VNHA++ VGY   +    W++KN W   WGDNGY  ++ G N CG+A  A Y ++
Sbjct: 299 NTPMDVNHAVVAVGYGVENDVPYWLIKNSWGADWGDNGYFKMEMGKNMCGVATCASYPVV 358


>gi|198285481|gb|ACH85279.1| cathepsin l-like [Salmo salar]
          Length = 444

 Score =  167 bits (424), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 155/308 (50%), Gaps = 11/308 (3%)

Query: 9   IFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPR 68
           +F   ++++ + Y  +    K++  +  N + +H+ N+        ++L  N LSDL   
Sbjct: 140 LFGHFKEQFGRHYGDEREHEKREHAFVHNLRYVHSMNRAGLS----FSLAVNSLSDLSMS 195

Query: 69  HYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
                  R    R    L         V +PD LDWR  G +TP  +Q  CG+C++F+  
Sbjct: 196 ELSAMRGRNRGKRPNNGLPFPMHLYTGVQVPDQLDWRLYGAVTPVKDQAICGSCWSFATT 255

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-P 187
            A++G +F ++  ++ LS Q +VDCS   GN GC GG       ++   GG+   E Y  
Sbjct: 256 GAVEGALFLTSGSLQVLSQQMLVDCSWGFGNNGCDGGEEWRAYEWIMKHGGIATTETYGS 315

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y G   +C F    +   I S++ +   D  ALKV L   GP+AVSI+A   +F  Y+ G
Sbjct: 316 YMGMNGLCHFNTSQLTARIQSYTNVTSGDAEALKVALFKHGPVAVSIDAGHRSFVFYSHG 375

Query: 248 IYDDEAC--TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIA 301
           +Y +  C  T+D ++HA+L VGY        W++KN WS +WG++GY+ +   +N CG+ 
Sbjct: 376 VYYEPKCGNTTDSLDHAVLAVGYGVMEAEPYWLVKNSWSTYWGNDGYILMSMKDNNCGVT 435

Query: 302 NYAVYALI 309
             A Y  +
Sbjct: 436 TDATYVTL 443


>gi|2146900|pir||S67481 cathepsin L-like cysteine proteinase (EC 3.4.22.-) CP1 [similarity]
           - fruit fly (Drosophila melanogaster)  (fragment)
          Length = 218

 Score =  167 bits (424), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 128/218 (58%), Gaps = 6/218 (2%)

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
           +P  +DWR KG +T   +Q  CG+C+AFS   A++GQ F+ +  +  LS Q +VDCS   
Sbjct: 1   LPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKY 60

Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
           GN GC GG + N   Y++  GG+  E+ YPY+     C F R  +      ++ +P  DE
Sbjct: 61  GNNGCNGGLMDNAFPYIKDNGGIDTEKSYPYEAIDDSCHFNRAQVGATDRGFTDIPQGDE 120

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----- 272
             +   + TVGP++V+I+AS  +FQ Y+ G+Y++  C +  ++H +L+VG+  +      
Sbjct: 121 KKMPEPVPTVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDY 180

Query: 273 WILKNWWSHHWGDNGYM-YLKRGNNRCGIANYAVYALI 309
           W++KN W   WGD G++  L+   N+CGIA+ + Y L+
Sbjct: 181 WLVKNSWGTTWGDKGFIKMLRNKENQCGIASPSSYPLV 218


>gi|330800456|ref|XP_003288252.1| hypothetical protein DICPUDRAFT_55299 [Dictyostelium purpureum]
 gi|325081708|gb|EGC35214.1| hypothetical protein DICPUDRAFT_55299 [Dictyostelium purpureum]
          Length = 531

 Score =  167 bits (424), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 13/307 (4%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F+  + +Y+K Y  K     +  +++  H KI +HN +       Y L  NH +DL   H
Sbjct: 225 FVAFKSEYEKSYENKEEHDMRFKNYKVAHNKIVSHNAKNLS----YKLGFNHYADLS-DH 279

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESV-LIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
               + +   +R       S   +E +  IP  +DWR +  +TP  +Q  CG+C+ F   
Sbjct: 280 EFNTLIKPKVARPSNNGAHSVHDDEDIYTIPQSVDWRNQKCVTPVKDQGVCGSCWTFGST 339

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
            +++G    +   +  LS QQ+VDC+ + G+ GC GG   +   Y+  AGG+  E DY Y
Sbjct: 340 GSLEGTNCVTNGYLVSLSEQQLVDCAYLMGSQGCNGGFAASAFQYIMDAGGIATESDYQY 399

Query: 189 KGKQSICKFKRPNIV-VDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
             + ++CK K      V +SS+  +     +AL   +AT GP+A++I+AS   F+ Y SG
Sbjct: 400 LMQNALCKDKSTTFSGVGVSSYVNVTAGSINALLNAVATQGPVAIAIDASVDDFRYYQSG 459

Query: 248 IYDDEACTS--DYVNHAMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRGNNRCGIA 301
           IY + +C +  D ++H +L +GY T N    W++KN WS +WG  GY  L+R NN CG A
Sbjct: 460 IYSNPSCKNGPDDLDHEVLAIGYGTLNGVDYWLVKNSWSTNWGMEGYFMLERANNLCGPA 519

Query: 302 NYAVYAL 308
           + A Y L
Sbjct: 520 SQATYPL 526


>gi|443687700|gb|ELT90593.1| hypothetical protein CAPTEDRAFT_217275 [Capitella teleta]
          Length = 248

 Score =  167 bits (424), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 135/239 (56%), Gaps = 9/239 (3%)

Query: 77  LTHSRIRRTLVRSPESNESV-LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           L   RI  T      S E V  +P  +DWR KGF++   +Q  C + YAF+   A++GQ+
Sbjct: 5   LKKRRIVSTAQELGLSEEQVRTLPHSVDWRTKGFVSEVQDQGACSSSYAFAALGAVEGQV 64

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F  T ++  LS Q +VDC+ I    GC GG L NTL+Y+    G+    DYPY G+   C
Sbjct: 65  FNKTGKLTTLSAQNIVDCAGIMLGDGCNGGILDNTLDYIMAFKGVNSLVDYPYIGQLQQC 124

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
            F +   +  I  + +L   +E  LK+T+ATVGP+AV+++AS   F+ Y  G+  D  C+
Sbjct: 125 AFNQSKAISGIGGYVILSGLNETLLKITIATVGPVAVTMDASSPYFRYYRHGVLVDPECS 184

Query: 256 SDY--VNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
           S++   NH++L+VGY  +      WI KN W   WG  GY++L R  +N CG++ + +Y
Sbjct: 185 SNWKDQNHSVLIVGYGTDEYGVEYWIAKNSWGKQWGMKGYVHLARNHDNMCGLSTHPMY 243


>gi|194757748|ref|XP_001961124.1| GF13714 [Drosophila ananassae]
 gi|190622422|gb|EDV37946.1| GF13714 [Drosophila ananassae]
          Length = 352

 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 155/291 (53%), Gaps = 28/291 (9%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRT----------LVRSP 90
           I   N+ +  G+  + L  N L+D+      KE+  L  S+I              +  P
Sbjct: 68  IALSNKNSDSGISSFQLSVNPLADMTK----KEIATLLGSKISDNGEKYTNGHINFLTGP 123

Query: 91  ESNESVLIPDHLDWREKGFITPDWNQE-DCGACYAFSIASAIQGQIFKSTSEIEELSIQQ 149
            ++ +V +P+  DWREKG +TP   Q   CG+C++F+   A++G IF+ T  +  LS Q 
Sbjct: 124 RTS-NVNLPEKFDWREKGGVTPPGFQGVGCGSCWSFATTGALEGHIFRRTGILPSLSQQN 182

Query: 150 VVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK----FKRP--NIV 203
           +VDC+   GN+GC GG       Y++   G+     YPY   +  C+      RP    +
Sbjct: 183 LVDCADDYGNMGCDGGFQEYAFEYIR-DHGITLANKYPYTQTEMQCRQNETAGRPPRESI 241

Query: 204 VDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAM 263
           V +  ++ + P DE  +K  +AT+GP+A S+NA   +F+ Y  GIY+D+AC +  VNH++
Sbjct: 242 VKVRDYASITPGDEEKMKEVIATLGPLACSMNADTISFEQYGGGIYEDDACNAGEVNHSV 301

Query: 264 LLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIANYAVYALI 309
            +VGY     R+ WI+KN +S +WG+ G+M L R     CGIA+   Y ++
Sbjct: 302 TVVGYGSENGRDYWIIKNSYSQNWGEGGFMRLPRNAGGFCGIASECSYPIL 352


>gi|111073719|dbj|BAF02548.1| triticain gamma [Triticum aestivum]
          Length = 365

 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 14/301 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +Y K Y   A   ++   +  + +++ + N+   +GL  Y L  N  SD+    +  + T
Sbjct: 70  RYGKSYESAAEVRRRFRIFSESLEEVRSTNR---KGLS-YRLGINRFSDMSWEEF--QAT 123

Query: 76  RLTHSRI-RRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ 134
           RL  ++    TL  +    ++  +P+  DWRE G ++P  +Q  CG+C+ FS   A++  
Sbjct: 124 RLGAAQTCSATLAGNHLMRDAAALPETKDWREDGIVSPVKDQSHCGSCWTFSTTGALEAA 183

Query: 135 IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI 194
             ++T +   LS QQ+VDC+    N GC+GG       Y+++ GG+  EE YPYKG   +
Sbjct: 184 YTQATGKNISLSEQQLVDCAGGFNNFGCSGGLPSQAFEYIKYNGGIDTEESYPYKGVNGV 243

Query: 195 CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
           C +K  N VV +     +    E  LK  +  V P++V+     + F+ Y SG+Y  + C
Sbjct: 244 CHYKAENAVVQVLDSVNITLNAEDELKNAVGLVRPVSVAFEV-INGFRQYKSGVYSSDHC 302

Query: 255 --TSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308
             T D VNHA+L VGY   +    W++KN W   WGDNGY  ++ G N C +A  A Y +
Sbjct: 303 GTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAVATCASYPI 362

Query: 309 I 309
           +
Sbjct: 363 V 363


>gi|242077600|ref|XP_002448736.1| hypothetical protein SORBIDRAFT_06g032320 [Sorghum bicolor]
 gi|241939919|gb|EES13064.1| hypothetical protein SORBIDRAFT_06g032320 [Sorghum bicolor]
          Length = 467

 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 158/291 (54%), Gaps = 17/291 (5%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM--TRLTHSRIRR 84
           DS+ ++ W  N + +  HN+ A  G HG+ L  N  +DL    +       R+  +R   
Sbjct: 75  DSRFRVFWD-NLRFVDAHNERA--GEHGFRLGMNQFADLTNDEFRAAYLGARIPAARSGN 131

Query: 85  TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEE 144
            +      + +  +P+ +DWREKG + P  NQ  CG+C+AFS  S+++      T E+  
Sbjct: 132 AVGEMYRHDGAEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESINQIVTGEMVT 191

Query: 145 LSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI-V 203
           LS Q++V+CS   GN GC GG +    N++   GG+  E+DYPYK     C   R N  V
Sbjct: 192 LSEQELVECSTDGGNSGCNGGLMDAAFNFIIKNGGIDTEDDYPYKAVDGKCDINRRNAKV 251

Query: 204 VDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAM 263
           V I ++  +P  DE +L+  +A   P++V+I A    FQLY SG++   +CT++ ++H +
Sbjct: 252 VSIDAFEDVPENDEKSLQKAVAHQ-PVSVAIEAGGRQFQLYKSGVFSG-SCTTN-LDHGV 308

Query: 264 LLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNN----RCGIANYAVY 306
           + VGY     ++ WI++N W   WG+ GY+ ++R  N    +CGIA  A Y
Sbjct: 309 VAVGYGTENGKDYWIVRNSWGPKWGEAGYIRMERNINATTGKCGIAMMASY 359


>gi|118150|sp|P25804.1|CYSP_PEA RecName: Full=Cysteine proteinase 15A; AltName:
           Full=Turgor-responsive protein 15A; Flags: Precursor
 gi|20679|emb|CAA38242.1| unnamed protein product [Pisum sativum]
          Length = 363

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 25/309 (8%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   + K+ K Y  K     +   ++SN  K   H        HG T   +  +    R 
Sbjct: 48  FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQ 107

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           ++    RL      +     P +N    +P+  DWREKG +TP  +Q  CG+C+AFS   
Sbjct: 108 FLGLKKRLRLPAHAQKAPILPTTN----LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTG 163

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSII-------SGNLGCAGGSLRNTLNYVQFAGGLMK 182
           A++G  + +T ++  LS QQ+VDC  +       S + GC GG + N   Y+  +GG+++
Sbjct: 164 ALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQ 223

Query: 183 EEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
           E+DY Y G+   CKF +  +V  +S++SV+   DE  +   L   GP+AV+INA+    Q
Sbjct: 224 EKDYAYTGRDGSCKFDKSKVVASVSNFSVV-TLDEDQIAANLVKNGPLAVAINAA--WMQ 280

Query: 243 LYASGIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHWGDNGYMYL 291
            Y SG+     C    ++H +LLVG+ + +           WI+KN W  +WG+ GY  +
Sbjct: 281 TYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKI 340

Query: 292 KRGNNRCGI 300
            RG N CG+
Sbjct: 341 CRGRNVCGV 349


>gi|118373972|ref|XP_001020178.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89301945|gb|EAR99933.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 339

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 155/290 (53%), Gaps = 11/290 (3%)

Query: 26  TDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTH-SRIRR 84
           T+S++   ++S   KI  HN +  +    YT   NHL+    R  ++++    + + + +
Sbjct: 54  TNSERYQLFKSRLAKIIEHNSDPNKT---YTQGINHLT-FQTREELQQLRGFQNCTALAK 109

Query: 85  TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI-FKSTSEIE 143
              RS  + +   IPD++DWREKG +T   NQ +CG+C+AF+   AI+     K+     
Sbjct: 110 ENTRSFRTYDMNDIPDYVDWREKGVVTAVKNQGECGSCWAFAAVGAIESHFSLKTGKSPI 169

Query: 144 ELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIV 203
           +LS QQ++DC+    N GC GG       Y+ + GG+   +DYPY GK + C+F   NIV
Sbjct: 170 QLSEQQLIDCARQFDNHGCDGGLPSKAFEYIAYEGGIENSKDYPYTGKNNKCQFDGENIV 229

Query: 204 VDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSD--YVNH 261
             +     +   DE  L   L   GP+ ++  A+   F  Y SGIY+ + C  D   VNH
Sbjct: 230 TKVKQSFNITYLDEKELIYHLVHKGPVTLAYEAADE-FDNYQSGIYEGKNCEQDPQKVNH 288

Query: 262 AMLLVGY--TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           A+L VGY  T + +I+KN W   WG NGY Y++   N CG+A+ A Y +I
Sbjct: 289 AVLAVGYNKTGDYYIVKNSWGDKWGMNGYFYIRANKNACGLASCASYPII 338


>gi|209155876|gb|ACI34170.1| Digestive cysteine proteinase 2 precursor [Salmo salar]
          Length = 551

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 155/308 (50%), Gaps = 11/308 (3%)

Query: 9   IFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPR 68
           +F   ++++ + Y  +    K++  +  N + +H+ N+        ++L  N LSDL   
Sbjct: 247 LFGHFKEQFGRHYGDEREHEKREHAFVHNLRYVHSMNRAGLS----FSLAVNSLSDLSMS 302

Query: 69  HYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
                  R    R    L         V +PD LDWR  G +TP  +Q  CG+C++F+  
Sbjct: 303 ELSAMRGRNRGKRPNNGLPFPMHLYTGVQVPDQLDWRLYGAVTPVKDQAICGSCWSFATT 362

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-P 187
            A++G +F ++  ++ LS Q +VDCS   GN GC GG       ++   GG+   E Y  
Sbjct: 363 GAVEGALFLTSGSLQVLSQQMLVDCSWGFGNNGCDGGEEWRAYEWIMKHGGIATTETYGS 422

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y G   +C F    +   I S++ +   D  ALKV L   GP+AVSI+A   +F  Y+ G
Sbjct: 423 YMGMNGLCHFNTSQLTARIQSYTNVTSGDAEALKVALFKHGPVAVSIDAGHRSFVFYSHG 482

Query: 248 IYDDEAC--TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIA 301
           +Y +  C  T+D ++HA+L VGY        W++KN WS +WG++GY+ +   +N CG+ 
Sbjct: 483 VYYEPKCGNTTDSLDHAVLAVGYGVMEAEPYWLVKNSWSTYWGNDGYILMSMKDNNCGVT 542

Query: 302 NYAVYALI 309
             A Y  +
Sbjct: 543 TDATYVTL 550


>gi|19909509|dbj|BAB86959.1| cathepsin L [Fasciola gigantica]
          Length = 324

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 154/310 (49%), Gaps = 28/310 (9%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N L+D+        
Sbjct: 25  KRMYNKEY-NGAVDEHRRNIWEDNVKHIQEHNLRHDVGLVTYTLGLNQLTDMTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P    +  +PD +DWR  G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMPRASDILSHG--------IPYEANNRAVPDKIDWRGSGYVTTVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S    ++GQ  K+       S QQ+VDCS   GN GC+GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNYGCSGGLMENAYEYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C++ R   V  ++ +  +    E  LK  +   GP A++++     F +Y
Sbjct: 194 SYPYTAVEGQCRYNRQLGVAKVTDYYTVHSGSEVELKNLVGAEGPAAIAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
           + GIY  + C    +NHA+L VGY        WI+KN W   WG+ GY+ + R   N CG
Sbjct: 253 SGGIYQSQTCLR--LNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCG 310

Query: 300 IANYAVYALI 309
           I++ A   ++
Sbjct: 311 ISSLASLPMV 320


>gi|281211531|gb|EFA85693.1| cysteine protease [Polysphondylium pallidum PN500]
          Length = 366

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 157/316 (49%), Gaps = 50/316 (15%)

Query: 30  KKLH-WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHP----RHYIKEMTRLTHSRIRR 84
           KK H ++SN   +H+ N +    +    L  NHL+D  P    + Y+    +  H  ++ 
Sbjct: 45  KKYHTFKSNMDYVHSWNAKNSDTV----LELNHLADHSPEEYKKFYLGTRVKHIHFNVQG 100

Query: 85  TLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEE 144
           T + +  S         +DWR+KG ++P  +Q  CG+C++FS   +++G     T  + E
Sbjct: 101 THINTQLSTVFEDSGATVDWRKKGAVSPIKDQGQCGSCWSFSTTGSVEGAHQIKTGNMVE 160

Query: 145 LSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ-SICKFKRPNIV 203
           LS Q +VDCS   GN+GC GG + N  +Y+    G+  E+ YPY     S+CKF + N+ 
Sbjct: 161 LSEQNLVDCSSAEGNMGCNGGLMNNAFDYIISNHGIDTEQSYPYTANTGSVCKFNKTNVG 220

Query: 204 VDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAM 263
             ISS+  + P  E  L   + T GP++V+I+AS  +FQLY+ GIY +  C+S  ++H +
Sbjct: 221 ATISSYKSITPGSETDLANAVKTAGPVSVAIDASHRSFQLYSHGIYYEWLCSSTRLDHGV 280

Query: 264 LLVGY---------------------------------------TRNSWILKNWWSHHWG 284
           L+VGY                                       ++N WI+KN WS  WG
Sbjct: 281 LVVGYGSGNPPNSDMDHMILKKTAKTDHYHGKKSLKVEKVDTTSSKNYWIVKNSWSDTWG 340

Query: 285 DNGYMYLKRG-NNRCG 299
           D GY+Y+ +   N CG
Sbjct: 341 DKGYIYMSKDRKNNCG 356


>gi|68137209|gb|AAY85545.1| male accessory gland protein [Drosophila simulans]
          Length = 362

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 147/295 (49%), Gaps = 15/295 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K Y   A  +  +  + S    +   N    QG++ +    N  +DL    ++ ++T L 
Sbjct: 63  KTYLSAADRALHEGAFASTKNLVDAGNAAFAQGVNTFKQAVNAFADLTHSEFLSQLTGLK 122

Query: 79  HSRIRRTLVRSPESNESVL-----IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
            S   +   R+  S + V      IP+  DWRE G +TP   Q  CG+C+AF+   AI+G
Sbjct: 123 RSPEAK--ARAAASLKEVALPAKPIPEAFDWREHGGVTPVKFQGTCGSCWAFATTGAIEG 180

Query: 134 QIFKSTSEIEELSIQQVVDCSIIS--GNLGCAGGSLRNTLNYV-QFAGGLMKEEDYPYKG 190
             F+ T  +  LS Q +VDC  +   G  GC GG       ++ +   G+ +   YPY  
Sbjct: 181 HTFRKTGSLPNLSEQNLVDCGPVQDFGLNGCDGGFQEAAFCFIDEVQKGVSQAGAYPYID 240

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
            +  CK+        +  ++ +PP+DE  LK  +AT+GP+A S+N    T + YA GIY+
Sbjct: 241 NKDTCKYDGSKSGATLQGFAAIPPKDEEQLKKVVATLGPVACSVNGL-ETLKNYAGGIYN 299

Query: 251 DEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIA 301
           D+ C     NH++L+VGY     ++ WI+KN W   WG+ GY  L RG N C IA
Sbjct: 300 DDECNKGEPNHSILVVGYGSENGQDYWIVKNSWDDTWGEKGYFRLPRGKNYCFIA 354


>gi|410911058|ref|XP_003969007.1| PREDICTED: counting factor associated protein D-like [Takifugu
           rubripes]
          Length = 549

 Score =  167 bits (423), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 165/312 (52%), Gaps = 19/312 (6%)

Query: 9   IFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPR 68
           IF   ++K+++ Y        ++  +  N + IH+ N+    GL  YTL  N LSD    
Sbjct: 245 IFGHFKEKFQRRYEDDKEHDIRQQAFIHNLRYIHSKNR---AGL-SYTLALNSLSD---- 296

Query: 69  HYIKEMTRLTHSRIRRTLVRSP----ESNESVLIPDHLDWREKGFITPDWNQEDCGACYA 124
             + E+  +   + R+T  R      +  E+V +PD LDWR  G +TP  +Q  CG+C++
Sbjct: 297 RTMSELGTMRGKKQRKTPNRGLPFPLKLYENVQVPDSLDWRLYGAVTPVKDQAICGSCWS 356

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           F+    I+G +F  T  ++ LS Q ++DCS   GN  C GG    +  ++   GG+   E
Sbjct: 357 FATTGTIEGALFLKTGFLQVLSQQILMDCSWGFGNNACDGGEEWRSYEWIMKHGGIALAE 416

Query: 185 DY-PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
            Y PY G    C      +V  I S++ +   D  ALK+ L   GP+AVSI+AS  +F  
Sbjct: 417 TYGPYMGMNGFCHVNSSELVAQIQSYTNVTSGDAMALKLALFKHGPVAVSIDASHRSFVF 476

Query: 244 YASGIYDDEACTS--DYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNR 297
           Y+ G+Y + AC S  D ++HA+L VGY   +    W++KN WS +WG++GY+ +   +N 
Sbjct: 477 YSHGVYYEPACGSTIDDLDHAVLAVGYGNLNGEPYWLIKNSWSTYWGNDGYILMSMKDNN 536

Query: 298 CGIANYAVYALI 309
           CG+A  A +  +
Sbjct: 537 CGVATDATFVTL 548


>gi|211910923|gb|ACJ13090.1| cathepsin L [Globodera rostochiensis]
          Length = 295

 Score =  167 bits (423), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 146/260 (56%), Gaps = 3/260 (1%)

Query: 12  FPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           + QK  +K Y  +  ++++ L + S  + I  HNQ   +G   + + ENH++DL    Y 
Sbjct: 34  YKQKHGRKSYADQDVENERMLTYLSAKQFIDKHNQAYIEGKVTFRVGENHIADLPFSEYK 93

Query: 72  K--EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           K     RL    +RR             +P+ +DWR+KG++T   NQ  CG+C+AFS   
Sbjct: 94  KLNGYRRLLGDNLRRNASTFLAPMNIGDLPESVDWRDKGWVTEVKNQGMCGSCWAFSSTG 153

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++ Q  + T ++  LS Q ++DCS   GN+GC GG + N   Y++   G+ KE DYPYK
Sbjct: 154 ALEAQHARQTGQLISLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNNGVDKELDYPYK 213

Query: 190 GKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            K    C FKR ++    + +  +   DE  LK+ +AT GP++V+I+A   +FQLY  G+
Sbjct: 214 AKTGKKCLFKRNDVGATDTGFFDIAEGDEERLKIAVATQGPVSVAIDAGHRSFQLYTHGV 273

Query: 249 YDDEACTSDYVNHAMLLVGY 268
           Y ++ C+ + ++H +L+VGY
Sbjct: 274 YFEKECSPENLDHGVLVVGY 293


>gi|313246319|emb|CBY35240.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  167 bits (423), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 157/304 (51%), Gaps = 13/304 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH---- 69
           +++++ +Y  +  +  +   W  N   +  H    + G   +T+  N  +DL        
Sbjct: 22  KEEHEVEYASQVEEVSRYGVWMKNKAFVDEHMASYEAGEKTFTVGMNKFADLTSEEFAEL 81

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKG--FITPDWNQEDCGACYAFSI 127
           Y+ ++  L+          +  +N +  +P   DWR      +TP  +Q  CG+C+AFS 
Sbjct: 82  YLAKVQDLSGPHPPMCTDSTVGANST--MPASADWRTANPPVVTPVKDQGQCGSCWAFST 139

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
            ++++ Q   + + +  LS QQ+VDCS+  GN GC+GG +     Y+    G+  E  YP
Sbjct: 140 IASLESQWALAGNALTSLSEQQLVDCSMNWGNYGCSGGLMTQGFTYIHDNNGVDTEASYP 199

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y  +   C F   N+   ++S   +   DE AL   +  VGP++V+I+AS  +FQLY SG
Sbjct: 200 YTAQDGKCVFNPANVGTSLTSCYNIASGDEAALANAVQMVGPMSVAIDASHMSFQLYTSG 259

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           +Y +  C+S +++H +  VGY  +S    +I+KN W+  WGDNGY+ + R  NN CGIA 
Sbjct: 260 VYYEPNCSSQFLDHGVTAVGYGSSSGNDFFIVKNSWAATWGDNGYIMMSRNKNNNCGIAT 319

Query: 303 YAVY 306
            A Y
Sbjct: 320 SASY 323


>gi|168047065|ref|XP_001775992.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672650|gb|EDQ59184.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 336

 Score =  167 bits (423), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 158/322 (49%), Gaps = 38/322 (11%)

Query: 7   IIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLH 66
           ++ F     KYKK+Y+       + + +  + K + THN+    G H Y+L  N  +D+ 
Sbjct: 26  VLHFAGFAAKYKKEYKTVEELKHRFVTFLESVKLVETHNK----GQHSYSLAVNEFADM- 80

Query: 67  PRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHL----------DWREKGFITPDWNQ 116
                      T    R + +   E N S  + +H+          DWRE+G ++   NQ
Sbjct: 81  -----------TFEEFRDSRLMKGEQNCSATVGNHVLTGESLPKTKDWREEGIVSQVKNQ 129

Query: 117 EDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQF 176
             CG+C+ FS   A++    ++T ++  LS QQ+VDC+    N GC GG       Y+++
Sbjct: 130 ASCGSCWTFSTTGALEAAHAQATGKMVLLSEQQLVDCAGEFNNFGCGGGLPSQAFEYIRY 189

Query: 177 AGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQD--EHALKVTLATVGPIAVSI 234
            GG+  E+ YPY  K S C+F +  I   +  W V+   +  E  LK  +AT+ P++V+ 
Sbjct: 190 NGGIDTEDSYPYNAKDSQCRFHKNTIGAQV--WDVVNITEGAETQLKHAIATMRPVSVAF 247

Query: 235 NASPHTFQLYASGIYDDEACTS--DYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNG 287
               H F+LY  G+Y    C +    VNHA+L VGY  +      WI+KN W   WG NG
Sbjct: 248 EV-VHDFRLYNGGVYTSLNCHTGPQTVNHAVLAVGYGEDENGVPYWIIKNSWGADWGMNG 306

Query: 288 YMYLKRGNNRCGIANYAVYALI 309
           Y  ++ G N CG+A  A Y ++
Sbjct: 307 YFNMEMGKNMCGVATCASYPVV 328


>gi|313213752|emb|CBY40632.1| unnamed protein product [Oikopleura dioica]
          Length = 440

 Score =  167 bits (423), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 157/304 (51%), Gaps = 13/304 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH---- 69
           +++++ +Y  +  +  +   W  N   +  H    + G   +T+  N  +DL        
Sbjct: 136 KEEHEVEYASQVEEVSRYGVWMKNKAFVDEHMASYEAGEKTFTVGMNKFADLTSEEFAEL 195

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKG--FITPDWNQEDCGACYAFSI 127
           Y+ ++  L+          +  +N +  +P   DWR      +TP  +Q  CG+C+AFS 
Sbjct: 196 YLAKVQDLSGPHPPMCTDSTVGANST--MPASADWRTANPPVVTPVKDQGQCGSCWAFST 253

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYP 187
            ++++ Q   + + +  LS QQ+VDCS+  GN GC+GG +     Y+    G+  E  YP
Sbjct: 254 IASLESQWALAGNALTSLSEQQLVDCSMNWGNYGCSGGLMTQGFTYIHDNNGVDTEASYP 313

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y  +   C F   N+   ++S   +   DE AL   +  VGP++V+I+AS  +FQLY SG
Sbjct: 314 YTAQDGKCVFNPANVGTSLTSCYNIASGDEAALANAVQMVGPMSVAIDASHMSFQLYTSG 373

Query: 248 IYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
           +Y +  C+S +++H +  VGY  +S    +I+KN W+  WGDNGY+ + R  NN CGIA 
Sbjct: 374 VYYEPNCSSQFLDHGVTAVGYGSSSGNDFFIVKNSWAATWGDNGYIMMSRNKNNNCGIAT 433

Query: 303 YAVY 306
            A Y
Sbjct: 434 SASY 437


>gi|384251069|gb|EIE24547.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
          Length = 548

 Score =  167 bits (423), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 156/302 (51%), Gaps = 32/302 (10%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLV---RSP 90
           + SN   + THN   +     Y+L  N  +D     +  E   L        LV   R  
Sbjct: 236 FHSNRLYVDTHNSAQRN----YSLALNRYADWSQEEF--EAVMLPRHGAAGGLVARRRGA 289

Query: 91  ESNE--------SVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
           +S E        +  +P  +DWR  G      +Q  CG+C+AF   +A+QG  + +T + 
Sbjct: 290 DSGELPYERLAPAWRVPRGVDWRGTGADGVVKDQATCGSCWAFGATAALQGAYWAATGKA 349

Query: 143 EELSIQQVVDCS-IISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC------ 195
              S QQ++DCS     N  C GG   N ++Y+   GG+ KE+DY Y G+   C      
Sbjct: 350 TSFSEQQLMDCSWKFGANHACDGGDYDNAIDYLVNVGGIAKEKDYEYLGQDDFCGNPFMA 409

Query: 196 KFKRPNI-VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC 254
             KRP+  +V +  +S +PP D+ AL   + + G IAVS++AS  TF+ YASG YD+  C
Sbjct: 410 DTKRPSSSLVKVKGYSYVPPHDDEALMEAVYSRGTIAVSLDASQPTFRFYASGTYDEPNC 469

Query: 255 T--SDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYA 307
              SD ++HA+ LVGY  +      WI+KN WS+HWGD G++ + RG++ CGI +  VYA
Sbjct: 470 MWKSDDLDHAVALVGYGTDEAGVDYWIIKNSWSNHWGDGGFIKIARGHHGCGITSDPVYA 529

Query: 308 LI 309
           + 
Sbjct: 530 VF 531


>gi|33333712|gb|AAQ11974.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  167 bits (423), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 162/301 (53%), Gaps = 17/301 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K YR    + ++   +Q N   I  HN++ ++G   +  +    +D+    ++ ++ +L 
Sbjct: 32  KTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFADMTHEEFL-DLLKLQ 90

Query: 79  HSRIRRTLVRSPESNESVLIP--DHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
                 +     ++ E + +   D +DWRE+G +TP  +Q +CG+C+AFS   AI+GQ F
Sbjct: 91  GVPALPSNAVHFDNFEDIDMEEKDAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFF 150

Query: 137 KSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           K    +  LS Q++VDC+    GN GC GG +    ++VQ   G+  EE YPY+G++S C
Sbjct: 151 KKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ-DEGIQTEESYPYEGRRSSC 209

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA-C 254
           K K    V  + ++  + P DE  +  T+A  GP+AV+I AS  +F  Y  GI D+   C
Sbjct: 210 K-KSGEYVTKVKTY--VFPLDEQEMARTVAAKGPVAVAIEASQLSF--YDKGIVDERCRC 264

Query: 255 TS--DYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308
           ++  + +NH +L+VGY   +    WI+KN W   WG+ GY  LK+    CGI  Y  Y +
Sbjct: 265 SNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIGYYNTYPI 324

Query: 309 I 309
           +
Sbjct: 325 L 325


>gi|440301075|gb|ELP93522.1| cysteine proteinase 2 precursor, putative [Entamoeba invadens IP1]
          Length = 323

 Score =  167 bits (423), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 131/216 (60%), Gaps = 11/216 (5%)

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
           + + +DWRE+G +T   +Q++CG+CY+F   S I+  I  ++ E E+LS QQ+VDC+  +
Sbjct: 105 VRNSVDWREEGKVTAIKDQKNCGSCYSFGAVSVIESLILITSGEYEDLSEQQIVDCTSNT 164

Query: 158 --GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQ 215
              N GC  G++ NT NY++   G+  E  Y Y   +S C     ++   I S++ + P 
Sbjct: 165 KYSNFGCTCGNVGNTFNYIKDV-GITTENKYRYIASESNCTVNEIDVKYKIQSYTSIFPP 223

Query: 216 DEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS--- 272
            E ALK+ +    P+AVSI+AS  +FQLY SGIYD+  C   YV+H + +VGY   +   
Sbjct: 224 TEDALKIAVNK-QPVAVSIDASNPSFQLYKSGIYDEPKC--KYVDHVVSVVGYGSQNGND 280

Query: 273 -WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            WI+KN W   WGD GY+Y+ R  NN+CGIA  A+Y
Sbjct: 281 YWIVKNSWGTEWGDKGYIYMSRNKNNQCGIATIALY 316


>gi|27413319|gb|AAO11786.1| pre-pro cysteine proteinase [Vicia faba]
          Length = 363

 Score =  167 bits (422), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 25/309 (8%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   + K+ K Y  K     +   ++SN  K   H +      HG T   +  +    R 
Sbjct: 48  FTSFKSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASEFRRQ 107

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           ++    RL      +     P +N    +P+  DWREKG +TP  +Q  CG+C+AFS   
Sbjct: 108 FLGLKKRLRLPAHAQKAPILPTTN----LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTG 163

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSII-------SGNLGCAGGSLRNTLNYVQFAGGLMK 182
           A++G  + +T ++  LS QQ+VDC  +       S + GC GG + N   Y+  +GG+++
Sbjct: 164 ALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLQSGGVVQ 223

Query: 183 EEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
           E+DY Y G+   CKF +  +V  +S++SV+   DE  +   L   GP+AV INA+    Q
Sbjct: 224 EKDYAYTGRDGSCKFDKSKVVASVSNFSVV-SLDEEQIAANLVKNGPLAVGINAA--WMQ 280

Query: 243 LYASGIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHWGDNGYMYL 291
            Y SG+     C    ++H +LLVG+ + +           WI+KN W  +WG+ GY  +
Sbjct: 281 TYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIVKNSWGQNWGEQGYYKI 340

Query: 292 KRGNNRCGI 300
            RG N CG+
Sbjct: 341 CRGRNVCGV 349


>gi|410990014|ref|XP_004001245.1| PREDICTED: cathepsin L1-like [Felis catus]
          Length = 334

 Score =  167 bits (422), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 153/294 (52%), Gaps = 20/294 (6%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRS 89
           +K  W+ N K I  HN+E  QG H +T+  N   D+    +   M  L   +  +  +  
Sbjct: 47  RKAVWEKNMKMIEQHNREQSQGKHSFTMAMNGFGDMTNEEFRHMMNGLKIEKDEKGKMFK 106

Query: 90  PESNESVLIPDHLDWREKGFITPDWN-----QEDCGACYAFSIASAIQGQIFKSTSEIEE 144
                 + +P  +D R+   ++P        Q  C + +AFS   A++GQ+F    E   
Sbjct: 107 IPFFADIYVP--VDRRQTPAVSPTETFIICFQGRCASGWAFSATGALEGQMF---PENWP 161

Query: 145 LSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVV 204
             +Q ++DCS   GN GC GG + N   YV+  GGL  EE YPY  +   CK++  +   
Sbjct: 162 NVVQNLLDCSWPQGNEGCNGGLMSNAFQYVKNNGGLDTEESYPYVARDGPCKYRPEHSAA 221

Query: 205 DISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAML 264
           +++++  +P Q+E AL + +A +GPI+ +I+AS  TF+ Y  GIY D  C+S+ +NH +L
Sbjct: 222 NVTAFENIPQQEE-ALMMAVANMGPISAAIDASLDTFRFYKEGIYYDPKCSSEDLNHGVL 280

Query: 265 LVGY--------TRNSWILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
           +VGY         +  W +KN W   WG +GY+ + K  +N CGIA  A + ++
Sbjct: 281 VVGYGFQGKESDNQKYWFVKNSWGADWGMDGYIKMAKDRDNHCGIATMASFPIV 334


>gi|1401242|gb|AAB67878.1| pre-pro-cysteine proteinase [Vicia faba]
          Length = 363

 Score =  167 bits (422), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 25/309 (8%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   + K+ K Y  K     +   ++SN  K   H +      HG T   +  +    R 
Sbjct: 48  FTSFKSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASEFRRQ 107

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           ++    RL      +     P +N    +P+  DWREKG +TP  +Q  CG+C+AFS   
Sbjct: 108 FLGLKKRLRLPAHAQKAPILPTTN----LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTG 163

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSII-------SGNLGCAGGSLRNTLNYVQFAGGLMK 182
           A++G  + +T ++  LS QQ+VDC  +       S + GC GG + N   Y+  +GG+++
Sbjct: 164 ALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLQSGGVVQ 223

Query: 183 EEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
           E+DY Y G+   CKF +  +V  +S++SV+   DE  +   L   GP+AV INA+    Q
Sbjct: 224 EKDYAYTGRDGSCKFDKSKVVASVSNFSVV-SLDEEQIAANLVKNGPLAVGINAA--WMQ 280

Query: 243 LYASGIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHWGDNGYMYL 291
            Y SG+     C    ++H +LLVG+ + +           WI+KN W  +WG+ GY  +
Sbjct: 281 TYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIVKNSWGQNWGEQGYYKI 340

Query: 292 KRGNNRCGI 300
            RG N CG+
Sbjct: 341 CRGRNVCGV 349


>gi|282158089|ref|NP_001164088.1| cathepsin L precursor [Tribolium castaneum]
          Length = 552

 Score =  167 bits (422), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 162/304 (53%), Gaps = 14/304 (4%)

Query: 15  KKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM 74
           +K+ K+Y+ K     +K  ++ N + IH+ N++ +    G+TL  NHL+D  P   +K +
Sbjct: 254 RKHGKNYQNKTETLMRKDIFRQNVRFIHSMNRQNR----GFTLTVNHLADKTPTE-LKAL 308

Query: 75  TRLTHSRIRRTLVRSPESN-ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
              T+S         P  N     +PD  DWR  G +TP  +Q  CG+C++F     ++G
Sbjct: 309 RGRTYSGGYNGGAPFPYENINKEDLPDQWDWRLLGAVTPVKDQSVCGSCWSFGTVGTVEG 368

Query: 134 QIF-KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-PYKGK 191
            +F  +   +  LS Q +VDCS   GN GC GG       ++   GG+  EE Y PY G+
Sbjct: 369 ALFLHNGGRLFRLSQQALVDCSWGYGNNGCDGGEDFRAYQWMLKHGGIPTEEAYGPYLGQ 428

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
              C   +   V  I+ +  +   DE+AL++ L   GPI+V+I+AS  TF  Y++G+Y +
Sbjct: 429 DGYCHADKVQKVAKITGYVNVTTNDENALRLALFKHGPISVAIDASQRTFSFYSNGVYYE 488

Query: 252 EACTS--DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAV 305
             C +  D ++HA+L VGY      N W++KN WS++WG++GY+ +   +N CG+     
Sbjct: 489 PKCGNKIDELDHAVLAVGYGTINGENYWLVKNSWSNYWGNDGYILMSSKDNNCGVMTTPT 548

Query: 306 YALI 309
           Y  +
Sbjct: 549 YVTM 552


>gi|6448469|dbj|BAA86911.1| homologue of Sarcophaga 26,29kDa proteinase [Periplaneta americana]
          Length = 552

 Score =  167 bits (422), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 161/306 (52%), Gaps = 15/306 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +K++ KDY      +K+K  ++ N + IH+ N+       G+TL  NHL+D      +K 
Sbjct: 252 RKRHSKDYASNLEHTKRKEIFRQNLRFIHSKNRARL----GFTLDVNHLAD-RTELELKA 306

Query: 74  MTRLTHSRIRRTLVRSPESNESVL---IPDHLDWREKGFITPDWNQEDCGACYAFSIASA 130
           +    ++         P +N   +   IPD LDWR  G +TP  +Q  CG+C++F     
Sbjct: 307 LRGKQYTDGYNGGSPFPYTNLDAIMDQIPDDLDWRIYGAVTPVKDQSVCGSCWSFGTTGT 366

Query: 131 IQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-PYK 189
           I+G  F     +  LS Q ++DCS   GN GC GG    +  ++   GG+  E++Y  Y 
Sbjct: 367 IEGAYFLKYGHLVRLSQQALIDCSWGYGNNGCDGGEDFRSYEWMMKHGGIPLEDEYGGYL 426

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
           G+   C  +   +   I+ +  +   D  ALKV LA  GPI+V+I+AS  TF  Y++GIY
Sbjct: 427 GQDGYCHVENVTLTAKITGYVNVTSGDIDALKVALAKHGPISVAIDASHKTFSFYSNGIY 486

Query: 250 DDEACTS--DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANY 303
            D  C +  D ++HA+LLVGY        W++KN WS++WG++GY+ +   +N CG+A  
Sbjct: 487 YDPECGNKLDQLDHAVLLVGYGIINGNPYWLVKNSWSNYWGNDGYILMSPKDNNCGVATD 546

Query: 304 AVYALI 309
             Y  +
Sbjct: 547 PTYVTM 552


>gi|8347420|dbj|BAA96501.1| cysteine protease [Nicotiana tabacum]
          Length = 360

 Score =  167 bits (422), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 150/300 (50%), Gaps = 13/300 (4%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMT 75
           +Y K Y       ++   +  N K I +HN+   +GL  Y L  N  +DL    + ++  
Sbjct: 67  RYGKRYESVEEIKQRFEVFLDNLKMIRSHNK---KGLS-YKLGVNEFTDLTWDEFRRD-- 120

Query: 76  RLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
           RL  ++      +      +V++P+  DWRE G ++P  NQ  CG+C+ FS   A++   
Sbjct: 121 RLGAAQNCSATTKGNLKVTNVVLPETKDWREAGIVSPVKNQGKCGSCWTFSTTGALEAAY 180

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
            ++  +   LS QQ+VDC+    N GC GG       Y++  GGL  EE YPY GK  +C
Sbjct: 181 SQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNGLC 240

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC- 254
           KF   N+ V +     +    E  LK  +A V P++++       F+ Y SG+Y    C 
Sbjct: 241 KFSSENVGVKVIDSVNITLGAEDELKYAVALVRPVSIAFEV-IKGFKQYKSGVYTSTECG 299

Query: 255 -TSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
            T   VNHA+L VGY   +    W++KN W   WGDNGY  ++ G N CGIA  A Y ++
Sbjct: 300 NTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVV 359


>gi|255211|gb|AAB23202.1| cathepsin S [cattle, spleen, Peptide Partial, 217 aa]
 gi|227966|prf||1714236A cathepsin S
          Length = 217

 Score =  167 bits (422), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 89/218 (40%), Positives = 125/218 (57%), Gaps = 7/218 (3%)

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
           +PD +DWREKG +T    Q  CG+C+AFS   A++ Q+   T ++  LS Q +VDCS   
Sbjct: 1   LPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAK 60

Query: 158 -GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQD 216
            GN GC GG +     Y+    G+  E  YPYK     C++   N     S +  LP   
Sbjct: 61  YGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDVKNRAATCSRYIELPFGS 120

Query: 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNS 272
           E ALK  +A  GP++V I+AS  +F LY +G+Y D +CT + VNH +L+VGY     ++ 
Sbjct: 121 EEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQN-VNHGVLVVGYGNLDGKDY 179

Query: 273 WILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309
           W++KN W  H+GD GY+ + R + N CGIANY  Y  I
Sbjct: 180 WLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSYPEI 217


>gi|33333698|gb|AAQ11967.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  167 bits (422), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 160/300 (53%), Gaps = 15/300 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K YR    + ++   +Q N   I  HN++ ++G   +  +    +D+    ++  +    
Sbjct: 32  KTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFADMTHEEFLDLLKLQG 91

Query: 79  HSRIRRTLVRSPESNESVLIP-DHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFK 137
              +    V      ++ +   D +DWRE+G +TP  +Q +CG+C+AFS   AI+GQ FK
Sbjct: 92  VPALPSNAVHFDNFEDTDMEEKDAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFFK 151

Query: 138 STSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
               +  LS Q++VDC+    GN GC GG +    ++VQ   G+  EE YPY+G++S CK
Sbjct: 152 KNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQ-DEGIQTEESYPYEGRRSSCK 210

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA-CT 255
            K  + V  + ++  + P DE  +  T+A  GP+AV+I AS  +F  Y  GI D++  C+
Sbjct: 211 -KSGDYVTKVKTY--VFPLDEQEMARTVAAKGPVAVAIEASQLSF--YDKGIVDEKCRCS 265

Query: 256 S--DYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           +  + +NH +L+VGY   +    WI+KN W   WG+ GY  LK+    CGI  Y  Y ++
Sbjct: 266 NKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIGYYNTYPIL 325


>gi|2706547|emb|CAA75862.1| putative cathepsin L [Xenopus laevis]
          Length = 231

 Score =  166 bits (421), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 130/221 (58%), Gaps = 10/221 (4%)

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           P  +DWR+KG++TP  +Q  CG+C+A S   A++GQ ++ TS++  LS Q +VDCS   G
Sbjct: 11  PKSVDWRKKGYVTPVKDQGQCGSCWAPSTTGALEGQHYRKTSKLISLSEQNLVDCSRAQG 70

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDISSWSVLPPQDE 217
           N GC GG +     YV+  GG+  E+ YPY  K    C +   N   + + +  +    E
Sbjct: 71  NEGCNGGLMDQAFQYVKDNGGIDSEDSYPYTAKDDQECHYDPNNNSANDTGFVDVQSGCE 130

Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----- 272
             L   +A+VGP++V+I+A   +FQ Y SGIY +  C+S+ ++H +L+VGY   S     
Sbjct: 131 KDLMKAVASVGPVSVAIDAGHQSFQFYQSGIYYEPECSSEDLDHGVLVVGYGFESEDVDG 190

Query: 273 ---WILKNWWSHHWGDNGYMYL-KRGNNRCGIANYAVYALI 309
              WI+KN WS  WGDNGY+ + K  +N CGIA  A Y L+
Sbjct: 191 KKYWIVKNSWSEKWGDNGYINIAKDRHNHCGIATAASYPLV 231


>gi|37911662|gb|AAR05023.1| cathepsin L-like protein [Tenebrio molitor]
          Length = 336

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 154/308 (50%), Gaps = 24/308 (7%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  Y + Y     ++ +K  +Q   +    HN++ +QGL  YTL  N  +D+ P    +E
Sbjct: 31  KTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTP----EE 86

Query: 74  MTRLTHSRIRRT-------LVRSPES---NESVLIPDHLDWREKGFITPDWNQEDCGACY 123
           M   TH  I           +++ E    N SV  P   DWR++G ++P  NQ  CG+C+
Sbjct: 87  MKAYTHGLIMPADLHKNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSCW 146

Query: 124 AFSIASAIQGQ--IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLM 181
           AFS   AI+ Q  I         +S QQ+VDC  +   LGC+GG + +   YV   GG+ 
Sbjct: 147 AFSSTGAIESQMKIANGAGYDSSVSEQQLVDC--VPNALGCSGGWMNDAFTYVAQNGGID 204

Query: 182 KEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTF 241
            E  YPY+     C +    +   +S +  L   DE+ L   +AT GP+AV+ +A    F
Sbjct: 205 SEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAVAFDAD-DPF 263

Query: 242 QLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNN 296
             Y+ G+Y +  C ++   HA+L+VGY     ++ W++KN W   WG +GY  + R  NN
Sbjct: 264 GSYSGGVYYNPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNANN 323

Query: 297 RCGIANYA 304
            CGIA  A
Sbjct: 324 HCGIAGVA 331


>gi|395502422|ref|XP_003755580.1| PREDICTED: pro-cathepsin H [Sarcophilus harrisii]
          Length = 334

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 20/294 (6%)

Query: 30  KKLHWQSNHKKIHTHNQEAQQ------GLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIR 83
           KK H    H ++HT  +  ++      G H +T+R N  SD+       E  +    R+ 
Sbjct: 43  KKYHLSEYHHRLHTFLENKRRIDKHNAGNHSFTMRLNQFSDMS----FDEFKKTYLMRLP 98

Query: 84  RTLVRSPESNESVL--IPDHLDWREKG-FITPDWNQEDCGACYAFSIASAIQGQIFKSTS 140
           +    +  S+   L   P+ +DWR+KG F++P  NQ  CG+C+ FS    ++  +  +T 
Sbjct: 99  QNCSATKGSHVRRLGPYPESVDWRKKGNFVSPVKNQGGCGSCWTFSTTGGLESAVAIATG 158

Query: 141 EIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRP 200
           ++  L+ QQ+VDC+    N GC GG       Y+ +  G+M E+ YPY+GK   CKF+  
Sbjct: 159 KLLSLAEQQLVDCAQDFNNHGCNGGLPSQAFEYIMYNKGIMGEDTYPYEGKDGTCKFQPN 218

Query: 201 NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS--DY 258
             +  +   + +   DE A+   +A   P++ +   +   F  Y  GIY +  C+   D 
Sbjct: 219 KAIAFVKDVANITAYDEEAMTEAVAHHNPVSFAFEVT-DDFLSYHKGIYSNPKCSKSPDK 277

Query: 259 VNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308
           VNHA+L VGY + +    WI+KN W   WG+NGY  ++RG N CG+A+ A Y +
Sbjct: 278 VNHAVLAVGYGKENGIPYWIVKNSWGTSWGNNGYFLIERGKNMCGLADCASYPI 331


>gi|238006338|gb|ACR34204.1| unknown [Zea mays]
          Length = 465

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 157/293 (53%), Gaps = 19/293 (6%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM--TRLTHSRIRR 84
           D + ++ W  N + +  HN+ A +  HG+ L  N  +DL    +       R+  SR R 
Sbjct: 70  DRRFRVFWD-NLRFVDAHNERAAE--HGFRLGMNQFADLTNDEFRAAYLGARIPASRRRG 126

Query: 85  TLV--RSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
           T V  R      +  +P+ +DWREKG + P  NQ  CG+C+AFS  S+++      T E+
Sbjct: 127 TAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEM 186

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI 202
             LS Q++V+CS   GN GC GG +    +++   GG+  E DYPYK     C   R N 
Sbjct: 187 VTLSEQELVECSTDGGNSGCNGGLMDAAFDFIIKNGGIDTEGDYPYKAVDGKCDINRENA 246

Query: 203 -VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNH 261
            VV I  +  +P  DE +L+  +A   P++V+I A    FQLY +G++    CT++ ++H
Sbjct: 247 KVVSIDGFEDVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYKAGVFTG-TCTTN-LDH 303

Query: 262 AMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNN----RCGIANYAVY 306
            ++ VGY     ++ WI++N W   WG++GY+ ++R  N    +CGIA  A Y
Sbjct: 304 GVVAVGYGTENGKDYWIVRNSWGAKWGEDGYIRMERNVNATTGKCGIAMMASY 356


>gi|62955235|ref|NP_001017633.1| uncharacterized protein LOC550326 precursor [Danio rerio]
 gi|62202194|gb|AAH92817.1| Zgc:110239 [Danio rerio]
          Length = 546

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 165/304 (54%), Gaps = 13/304 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY-IK 72
           ++K+ + Y  +    +++ ++  N + +H+ N+        ++L  NHL+D   +   + 
Sbjct: 247 KEKFNRQYDNEMEHEEREHNFVHNIRYVHSMNRAGLS----FSLSVNHLADRSQKELSMM 302

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
              + TH ++ R     P    S+  P+ +DWR  G +TP  +Q  CG+C++F+    ++
Sbjct: 303 RGCQRTH-KVHRKAQPFPSEIRSIATPNSVDWRLYGAVTPVKDQAVCGSCWSFATTGTLE 361

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-PYKGK 191
           G +F  T ++  LS Q +VDC+   GN GC GG       ++   GG+   E Y  Y G 
Sbjct: 362 GALFLKTGQLTSLSQQMLVDCTWGFGNNGCDGGEEWRAFEWIMKHGGISTAESYGAYMGM 421

Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
             +C + + ++V  ++ ++ +   D  ALK  +   GP+AVSI+A+  +F  Y++G+Y +
Sbjct: 422 NGLCHYDKSSMVAQLTGYTNVTSGDILALKAAIFKFGPVAVSIDAAHRSFAFYSNGVYYE 481

Query: 252 EACTS--DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAV 305
             C +  + ++HA+L VGY      + W++KN WS +WG++GY+ +   +N CG+A  A+
Sbjct: 482 PECKNGINDLDHAVLAVGYGIMNNESYWLVKNSWSSYWGNDGYILMSMKDNNCGVATDAI 541

Query: 306 YALI 309
           YA +
Sbjct: 542 YATL 545


>gi|195123633|ref|XP_002006308.1| GI18640 [Drosophila mojavensis]
 gi|193911376|gb|EDW10243.1| GI18640 [Drosophila mojavensis]
          Length = 243

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 143/248 (57%), Gaps = 17/248 (6%)

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
           M  L  + I     R P  +    +P+  DWREKG +TP  +Q  CG+C+AF+  SA++G
Sbjct: 1   MLELISTHISFLPARKPLES----LPESFDWREKGGVTPPGSQGPCGSCWAFATISALEG 56

Query: 134 QIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQS 193
            +F+ T  +  LS Q +VDC+   G  GC GG       Y++  G  +  + YPY+  ++
Sbjct: 57  HLFRRTGVLVPLSQQNLVDCADAYGTEGCDGGFQEYGFEYIRDHGVTLANK-YPYEQSEN 115

Query: 194 -ICKFKRP------NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
            +C+  +       + +V +  ++ +PP D+  +K  +AT+GP+A S+N SP +FQ Y S
Sbjct: 116 MVCRQNQTAGAPPRDSIVKVRDYASIPPGDQDLMKQIIATLGPLACSMNGSPVSFQQYKS 175

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKR-GNNRCGIA 301
           GIYDD  C ++ VNH++ +VGY     R+ WI+KN +S +WG+ G+  L R  +N CGIA
Sbjct: 176 GIYDDPECNNEEVNHSVTVVGYGSENGRDYWIVKNSYSQNWGEAGFFRLARTPSNFCGIA 235

Query: 302 NYAVYALI 309
           +   Y ++
Sbjct: 236 SECSYPIL 243


>gi|414584879|tpg|DAA35450.1| TPA: cysteine protease 1 [Zea mays]
          Length = 522

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 157/293 (53%), Gaps = 19/293 (6%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM--TRLTHSRIRR 84
           D + ++ W  N + +  HN+ A +  HG+ L  N  +DL    +       R+  SR R 
Sbjct: 127 DRRFRVFWD-NLRFVDAHNERAAE--HGFRLGMNQFADLTNDEFRAAYLGARIPASRRRG 183

Query: 85  TLV--RSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
           T V  R      +  +P+ +DWREKG + P  NQ  CG+C+AFS  S+++      T E+
Sbjct: 184 TAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEM 243

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI 202
             LS Q++V+CS   GN GC GG +    +++   GG+  E DYPYK     C   R N 
Sbjct: 244 VTLSEQELVECSTDGGNSGCNGGLMDAAFDFIIKNGGIDTEGDYPYKAVDGKCDINRENA 303

Query: 203 -VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNH 261
            VV I  +  +P  DE +L+  +A   P++V+I A    FQLY +G++    CT++ ++H
Sbjct: 304 KVVSIDGFEDVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYKAGVFTG-TCTTN-LDH 360

Query: 262 AMLLVGY-TRNS---WILKNWWSHHWGDNGYMYLKRGNN----RCGIANYAVY 306
            ++ VGY T N    WI++N W   WG++GY+ ++R  N    +CGIA  A Y
Sbjct: 361 GVVAVGYGTENGKDYWIVRNSWGAKWGEDGYIRMERNVNATTGKCGIAMMASY 413


>gi|33333706|gb|AAQ11971.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 159/301 (52%), Gaps = 17/301 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K YR    + ++   +Q N   I  HN++ ++G   +  +    +D+    ++ ++ +L 
Sbjct: 32  KTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFADMTHEEFL-DLLKLQ 90

Query: 79  HSRIRRTLVRSPESNESVLIP--DHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIF 136
                 +     ++ E + +   D +DWRE+G +TP  +Q +CG+C+AFS   AI+GQ F
Sbjct: 91  GVPALPSNAVHFDNFEDIDMEEKDAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFF 150

Query: 137 KSTSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           K    +  LS Q++VDC+    GN GC GG +    ++VQ   G+  EE YPY+G++S C
Sbjct: 151 KKNGTLVSLSAQELVDCATEDYGNNGCKGGLMGQAFDFVQ-DEGIQTEESYPYEGRRSSC 209

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           K K    V  + ++  + P DE  +  T+A  GP+AV+I AS  +F  Y  GI D+    
Sbjct: 210 K-KSGEYVTKVKTY--VFPLDEQEMARTVAAKGPVAVAIEASQLSF--YDKGIVDERCRC 264

Query: 256 SDY---VNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308
           S+    +NH +L+VGY   +    WI+KN W   WG+ GY  LK+    CGI  Y  Y +
Sbjct: 265 SNKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIGYYNTYPI 324

Query: 309 I 309
            
Sbjct: 325 F 325


>gi|350425511|ref|XP_003494144.1| PREDICTED: counting factor associated protein D-like [Bombus
           impatiens]
          Length = 549

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 158/305 (51%), Gaps = 14/305 (4%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY--I 71
           +K + K+Y        +K  ++ N + IH+ N+  +    GY L  NHL D        +
Sbjct: 250 KKTHNKEYVNHVDQLMRKEVFRQNLRFIHSTNRANK----GYQLSVNHLVDRTELELKAL 305

Query: 72  KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +      H    +    + E  E   +PD LDWR  G +TP  +Q  CG+C++F    A+
Sbjct: 306 RGKQYTAHYNGGQPFPHNAEK-EVTEVPDSLDWRLYGAVTPVKDQSVCGSCWSFGTTGAV 364

Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-PYKG 190
           +G  +    ++  LS Q ++DCS   GN GC GG    +  ++   GGL  E+DY  Y G
Sbjct: 365 EGAYYMKYGKLVRLSQQALIDCSWGYGNNGCDGGEDFRSYQWIMKHGGLPTEDDYGGYLG 424

Query: 191 KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYD 250
           +   C      +   I+ +  +   D +ALKV +A  GPI+V+I+AS  TF  Y+ G+Y 
Sbjct: 425 QDGYCHINNATVTAKITGYVNVTSGDANALKVAIAKHGPISVAIDASHKTFSFYSHGVYY 484

Query: 251 DEAC--TSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYA 304
           DE+C  T + ++HA+L VGY     ++ W++KN WS++WG++GY+ + +  N CG+    
Sbjct: 485 DESCGNTEESLDHAVLAVGYGSLNGKDYWLVKNSWSNYWGNDGYILMSQEKNNCGVLTAP 544

Query: 305 VYALI 309
            Y  +
Sbjct: 545 TYVTM 549


>gi|195995653|ref|XP_002107695.1| hypothetical protein TRIADDRAFT_51454 [Trichoplax adhaerens]
 gi|190588471|gb|EDV28493.1| hypothetical protein TRIADDRAFT_51454 [Trichoplax adhaerens]
          Length = 549

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 164/308 (53%), Gaps = 25/308 (8%)

Query: 21  YRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSD--------LHPRHYIK 72
           YR     +K++ +++ + + I + N++  +    Y L+ NH +D           RH+  
Sbjct: 244 YRDHHQHAKRQNYFRQHLRFIQSTNRKGLK----YQLKLNHFADRSDKELWNFTQRHFKL 299

Query: 73  EMTRLTHSR----IRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
              +L H       R  L  + + N+S  I DHLDWR++G I+   +Q  C +C+A S  
Sbjct: 300 NYGKLEHDVKNFITRYKLPFALDLNQS--IADHLDWRDRGAISKIRDQGMCSSCWALSTT 357

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-P 187
            AI+  ++  T E  ELS Q +VDCS   GN GC+GG + +TL ++    G+  +  Y  
Sbjct: 358 QAIESALYIQTGEKVELSSQSLVDCSWPFGNQGCSGGFISHTLAWIIKQRGIPTKSSYGQ 417

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           Y G+   C          +  +S +P  +  ALKV LA VGP+ VSIN SP +F  Y+SG
Sbjct: 418 YLGRNGYCHHHDLTTGAKLKGYSQIPQGNMKALKVALAKVGPVTVSINTSPKSFLFYSSG 477

Query: 248 IYDDEACTSDY--VNHAMLLVGYTR----NSWILKNWWSHHWGDNGYMYLKRGNNRCGIA 301
           ++ ++ C  DY  ++H +L +GY R    +  ++KN WS +WGD+GY+ +   NN CG+A
Sbjct: 478 VFYNDQCLGDYAHLDHNVLAIGYGRQHDQDYILIKNSWSAYWGDHGYIKISTRNNNCGLA 537

Query: 302 NYAVYALI 309
             A Y ++
Sbjct: 538 TNAYYPIL 545


>gi|340369133|ref|XP_003383103.1| PREDICTED: silicatein-like [Amphimedon queenslandica]
          Length = 340

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 18/312 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           +  + K Y     +  + + W SN K I  HN+ ++    GYTL+ N   DL    + + 
Sbjct: 31  KATHGKSYESDHEELGRHIVWLSNKKYIDEHNKYSET--FGYTLKMNKFGDLTNAEFSEL 88

Query: 74  MTRLT----HSRIRRTL-----VRSPESNESVL--IPDHLDWREKGFITPDWNQEDCGAC 122
           MT +     H+   + L     ++  E   S +  +PD +DWR  G +T   +Q  CG  
Sbjct: 89  MTCVQDYKRHNATDKLLSMKKGIKISEYKASGVSSLPDTVDWRTGGAVTWVKDQLRCGCS 148

Query: 123 YAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMK 182
           YAF+ A+A++G    +   +  LS Q +VDCSI  GN GC+ G + N   YV   GGL  
Sbjct: 149 YAFAAAAALEGAAALARGSLVSLSAQNIVDCSIPFGNHGCSCGDVNNAFMYVIDNGGLDT 208

Query: 183 EEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
           E  YPY  KQ  CKFK   I    +    +   DE +L   LAT GP+AV I+AS  +FQ
Sbjct: 209 ENVYPYVSKQDGCKFKSNGIGATATGIIRIASGDETSLASALATAGPVAVYIDASHSSFQ 268

Query: 243 LYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNR 297
            Y  G+ +   C+   ++HAM+L+GY     R  W+LKN W  +WG  GY+ + +G +N+
Sbjct: 269 FYHYGVLNVPNCSRTNLSHAMILIGYGKYGGREYWLLKNSWGPNWGTAGYIMMSKGKSNQ 328

Query: 298 CGIANYAVYALI 309
           CGIA YA +  +
Sbjct: 329 CGIATYASFPTL 340


>gi|326932936|ref|XP_003212567.1| PREDICTED: counting factor associated protein D-like [Meleagris
           gallopavo]
          Length = 573

 Score =  166 bits (421), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 159/308 (51%), Gaps = 11/308 (3%)

Query: 9   IFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPR 68
           +F   ++++ + Y        ++  +  N + +H+ N+ A      Y+L  NHL+D  P+
Sbjct: 269 VFHHYRRRFGRHYGSARELEHRQRIFVHNMRFVHSKNRAALS----YSLALNHLADRTPQ 324

Query: 69  HYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
                  R         L    E    +++P+ LDWR  G +TP  +Q  CG+C++F+  
Sbjct: 325 EMAAMRGRRRSGDPNHGLPFPAEHYAGIILPESLDWRLYGAVTPVKDQAVCGSCWSFATT 384

Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-P 187
            A++G +F  T  +  LS Q ++DCS   GN  C GG       +++  GG+   E Y  
Sbjct: 385 GAMEGALFLKTGVLTPLSQQVLIDCSWGFGNYACDGGEEWRAYEWIKKHGGIASTESYGT 444

Query: 188 YKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG 247
           YKG+  +C + +  ++  I+ +  +   +  A+K  +   GP+AVSI+AS  TF  Y++G
Sbjct: 445 YKGQNGLCHYNQSEMLAKITGYVNVTSGNITAVKTAIYKHGPVAVSIDASHKTFSFYSNG 504

Query: 248 IYDDEACT--SDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIA 301
           IY +  C   S  ++HA+L VGY        W++KN WS +WG++GY+ +   +N CG+A
Sbjct: 505 IYYEPKCANKSGQLDHAVLAVGYGVLQGETYWLIKNSWSTYWGNDGYILMAMKDNNCGVA 564

Query: 302 NYAVYALI 309
             A Y ++
Sbjct: 565 TEATYPIL 572


>gi|332384364|gb|AEE69034.1| cysteine protease [Taenia pisiformis]
          Length = 338

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 8/276 (2%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE-MTRLTHSRIRRTLVRSPESNESVL-I 98
           I   N+  + GL  Y+   N  +DL    + +  +     +R+     R  ++ +S   +
Sbjct: 64  IKGQNRRFEAGLESYSTGLNQFADLELSEFTERFLGTRPENRVAGKCGRVWKALKSFADL 123

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +DWR+K  +T   NQ +CG+C+AFS   A++  + K T ++  LS QQ+VDCS+ +G
Sbjct: 124 PDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGALEAALAKKTGKLISLSEQQLVDCSLKNG 183

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   Y++    +  E  YPY+     C++     V  ++    +P  +E 
Sbjct: 184 NDGCNGGYMSNAFKYLE-DHSIEPESAYPYRATDGPCRYNESLGVGTVTDIGEIPEGNET 242

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WI 274
           AL   +ATVGPI+++I+AS   F  Y  GIY    C+S ++NH +L VGY +      W+
Sbjct: 243 ALMEAVATVGPISIAIDASSLGFMFYRHGIYKSHWCSSKFLNHGVLAVGYGKLDGKPYWL 302

Query: 275 LKNWWSHHWGDNGY-MYLKRGNNRCGIANYAVYALI 309
           +KN W   WG  GY M  K  +N CGIA+ A +  +
Sbjct: 303 VKNSWGSGWGMKGYIMMAKDYHNMCGIASLADFPYV 338


>gi|224105327|ref|XP_002313770.1| predicted protein [Populus trichocarpa]
 gi|222850178|gb|EEE87725.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 157/312 (50%), Gaps = 32/312 (10%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   ++K+KK Y  +     +   ++SN ++   H +      HG T      SDL    
Sbjct: 53  FSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVT----QFSDLTSAE 108

Query: 70  YIKEMTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
           + K++  L   R+ +    +P   +N+   +P+  DWREKG + P  NQ  CG+C++FS 
Sbjct: 109 FRKQVLGLRKLRLPKDANTAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSFST 165

Query: 128 ASAIQGQIFKSTSEIEELSIQQVVDC-------SIISGNLGCAGGSLRNTLNYVQFAGGL 180
             A++G  F +T E+  LS QQ+VDC          S + GC GG + +   Y   AGGL
Sbjct: 166 TGALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 225

Query: 181 MKEEDYPYKG-KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239
           M+EEDYPY G  +  CKF +  +   ++++S +   DE  +   L   GP+AV+INA   
Sbjct: 226 MREEDYPYTGMDRGACKFDKNKVAAGVANFSAV-SLDEDQIAANLVKNGPLAVAINAV-- 282

Query: 240 TFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHWGDNGY 288
             Q Y  G+     C S  ++H +LLVGY   +           WI+KN W   WG+NG+
Sbjct: 283 FMQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAAYAPVRMKEKPYWIIKNSWGESWGENGF 341

Query: 289 MYLKRGNNRCGI 300
             + RG N CG+
Sbjct: 342 YKICRGRNICGV 353


>gi|167427525|gb|ABZ80399.1| cathepsin L3, partial [Fasciola hepatica]
          Length = 306

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 154/305 (50%), Gaps = 16/305 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y     + ++K+ W+ N K I  HN     GL  YTL  N  +DL        
Sbjct: 5   KRIYNKEYNGADNEHRRKI-WEQNVKHIQEHNLRHDLGLVTYTLGLNQFTDLTFEEFKAK 63

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+ L    +   +    E N+   +P  +DWR+ G++T   +Q  CG+C+AFS   
Sbjct: 64  YLIEMS-LESESLSDGISYEAEGND---VPASIDWRQYGYVTEVKDQGQCGSCWAFSAVG 119

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           AI+GQ  K        S QQ+VD +   GN GC GG + N   Y++ + GL     YPY+
Sbjct: 120 AIEGQYVKKFQNQTLFSEQQLVDRTRRFGNHGCGGGWMENAYKYLKNS-GLETASYYPYQ 178

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
             +  C+++R   V  ++    +   DE  L   +   GP AV+++A    F +Y SGI+
Sbjct: 179 AWEYPCQYRRELGVAKVTGAYTVHSGDEMRLMQMVGREGPAAVAVDAQS-DFYMYKSGIF 237

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
             + CTS  V H +L VGY   S    WILKN W   WG++GYM   R  NN C IA+ A
Sbjct: 238 QSQTCTSQRVTHPVLAVGYGTESGTDYWILKNRWGKWWGEDGYMRFARNRNNMCAIASVA 297

Query: 305 VYALI 309
              ++
Sbjct: 298 SVPMV 302


>gi|7211745|gb|AAF40416.1|AF216785_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
 gi|7381223|gb|AAF61442.1|AF138266_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
          Length = 366

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 154/314 (49%), Gaps = 35/314 (11%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   ++++ K Y        +   +++N ++   H Q     +HG T      SDL P  
Sbjct: 49  FAVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQQLDPAAVHGVT----QFSDLTPTE 104

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVL----IPDHLDWREKGFITPDWNQEDCGACYAF 125
           + ++   L     RR    +      +L    +P   DWR++G +TP  NQ  CG+C++F
Sbjct: 105 FRRKFLGLN----RRLKFPADAKTAPILPTDELPSDFDWRDRGAVTPVKNQGTCGSCWSF 160

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCS-------IISGNLGCAGGSLRNTLNYVQFAG 178
           S   A++G  F +T ++  LS QQ+VDC          S + GC GG + +   Y   AG
Sbjct: 161 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAG 220

Query: 179 GLMKEEDYPYKGKQ-SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237
           GLM+EEDYPY G    +C+F +  I   ++++SV+   DE  +   L   GP+AV+INA 
Sbjct: 221 GLMREEDYPYTGNDLQVCRFDKTKIAAKVANFSVV-SLDEDQIAANLVKNGPLAVAINAV 279

Query: 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----------TRNSWILKNWWSHHWGDN 286
               Q Y  G+     C S  ++H +LLVGY            +  WI+KN W   WG+N
Sbjct: 280 --FMQTYIGGVSCPYIC-SKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGEN 336

Query: 287 GYMYLKRGNNRCGI 300
           GY  + RG N CG+
Sbjct: 337 GYYKICRGRNVCGV 350


>gi|154415085|ref|XP_001580568.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121914787|gb|EAY19582.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 305

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 147/278 (52%), Gaps = 19/278 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           W SN + +  HN+       G+TL  N L+ L P  Y K M    ++       +S    
Sbjct: 34  WLSNKRFVQNHNRANL----GFTLALNKLAHLSPAEY-KAMLGFRNNGTHNIATKS---- 84

Query: 94  ESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDC 153
            + +  D +DWR KG + P  +Q  CG+C+AFS     + Q   +  ++++LS Q +VDC
Sbjct: 85  -NTIANDGIDWRTKGVVNPIQDQAQCGSCWAFSAIQVQESQYAITYGQLQKLSEQNLVDC 143

Query: 154 SIISGNLGCAGGSLRNTLNY-VQFAGG-LMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
             ++   GC GG +    +Y +Q+ GG  M E+DYPY      CKF +      I S+  
Sbjct: 144 --VTSCDGCGGGLMSAAYDYAIQYQGGKFMLEKDYPYTALDGTCKFNKAKATSKIVSYIN 201

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--- 268
           +   DE  L   ++  GP +V+I+AS  +FQ Y+ GIYD+  C+S  ++H +  VGY   
Sbjct: 202 VVEGDEKDLAAKVSAYGPSSVAIDASQISFQFYSQGIYDEPYCSSYSLDHGVGCVGYGTE 261

Query: 269 -TRNSWILKNWWSHHWGDNGYM-YLKRGNNRCGIANYA 304
            T+N WI++N W   WGD GY+  +K  NN+CGIA  A
Sbjct: 262 GTKNYWIVRNSWGLGWGDQGYIRMIKDKNNQCGIATMA 299


>gi|211910909|gb|ACJ13083.1| cathepsin L [Globodera pallida]
          Length = 293

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 145/260 (55%), Gaps = 3/260 (1%)

Query: 12  FPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           + QK  +K Y  +  ++++ L + S  + I  HNQ   +G   + + ENH++DL    Y 
Sbjct: 34  YKQKHGRKSYADQDVENERMLTYLSAKQFIDKHNQAYIEGKVTFRVGENHIADLPFSEYK 93

Query: 72  K--EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           K     RL    +RR             +P+ +DWR+KG++T   NQ  CG+C+AFS   
Sbjct: 94  KLNGYRRLLGDNLRRNASTFLAPMNVGDLPESVDWRDKGWVTEVKNQGMCGSCWAFSSTG 153

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++ Q  + T ++  LS Q ++DCS   GN+GC GG + N   Y++   G+ KE DYPYK
Sbjct: 154 ALEAQHARQTGQLISLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNNGVDKELDYPYK 213

Query: 190 GKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            K    C FKR ++    + +  +   DE  LK+ +AT GP +V+I+A   +FQLY  G+
Sbjct: 214 AKTGKKCLFKRNDVGATDTGFFDIAEGDEEKLKIAVATQGPASVAIDAGHRSFQLYTHGV 273

Query: 249 YDDEACTSDYVNHAMLLVGY 268
           Y ++ C+ + ++H +L+VGY
Sbjct: 274 YFEKECSPENLDHGVLVVGY 293


>gi|60396844|gb|AAX19661.1| cysteine proteinase [Populus tomentosa]
          Length = 374

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 157/308 (50%), Gaps = 32/308 (10%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           ++K+KK Y  +     +   ++SN ++   H +      HG T      SDL    + K+
Sbjct: 63  KRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVT----QFSDLTSAEFRKQ 118

Query: 74  MTRLTHSRIRRTLVRSP--ESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
           +  L   R+ +   ++P   +N+   +P+  DWREKG + P  NQ  CG+C++FS   A+
Sbjct: 119 VLGLRKLRLPKDANKAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSFSTTGAL 175

Query: 132 QGQIFKSTSEIEELSIQQVVDCS-------IISGNLGCAGGSLRNTLNYVQFAGGLMKEE 184
           +G  F +T E+  LS QQ+VDC          S + GC GG + +   Y   AGGLM+EE
Sbjct: 176 EGAHFLATGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 235

Query: 185 DYPYKG-KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243
           DYPY G  +  CKF +  +   ++++SV+   DE  +   L   GP+AV+ NA     Q 
Sbjct: 236 DYPYTGMDRGACKFDKDKVAAGVANFSVV-SLDEDQIAANLVKNGPLAVATNAV--FMQT 292

Query: 244 YASGIYDDEACTSDYVNHAMLLVGY-----------TRNSWILKNWWSHHWGDNGYMYLK 292
           Y  G+     C S  ++H +LLVGY            +  WI+KN W   WG+NG+  + 
Sbjct: 293 YIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPVRMKEKPYWIIKNSWGESWGENGFYKIC 351

Query: 293 RGNNRCGI 300
           RG N CG+
Sbjct: 352 RGRNICGV 359


>gi|356564325|ref|XP_003550405.1| PREDICTED: cysteine proteinase 15A [Glycine max]
          Length = 370

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 152/305 (49%), Gaps = 27/305 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
           + K+ K Y  K     +   ++SN ++   H +     +HG T      SDL P  + ++
Sbjct: 60  KAKFAKTYATKEEHDHRFGVFKSNLRRARLHAKLDPSAVHGVT----KFSDLTPAEFRRQ 115

Query: 74  MTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133
              L   R      ++P      L P   DWR+KG +T   +Q  CG+C++FS   A++G
Sbjct: 116 FLGLKPLRFPAHAQKAPILPTKDL-PKDFDWRDKGAVTNVKDQGACGSCWSFSTTGALEG 174

Query: 134 QIFKSTSEIEELSIQQVVDCSII-------SGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
             + +T E+  LS QQ+VDC  +       + + GC GG + N   Y+  +GG+ KE+DY
Sbjct: 175 AHYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDY 234

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PY G+   CKF +  +   +S++SV+   DE  +   L   GP+AV+INA     Q Y  
Sbjct: 235 PYTGRDGTCKFDKTKVAATVSNYSVV-SLDEEQIAANLVKNGPLAVAINAV--FMQTYVG 291

Query: 247 GIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHWGDNGYMYLKRGN 295
           G+     C   +++H +LLVGY   +           WI+KN W   WG+NGY  + RG 
Sbjct: 292 GVSCPYIC-GKHLDHGVLLVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYYKICRGR 350

Query: 296 NRCGI 300
           N CG+
Sbjct: 351 NVCGV 355


>gi|333827692|gb|AEG19548.1| cathepsin L-like cysteine protease [Taenia pisiformis]
          Length = 338

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 8/276 (2%)

Query: 41  IHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE-MTRLTHSRIRRTLVRSPESNESVL-I 98
           I   N+  + GL  Y+   N  +DL    + +  +     +R+     R  ++ +S   +
Sbjct: 64  IKGQNRRFEAGLESYSTGLNQFADLELSEFTERFLGTRPENRVAGKCGRVWKALKSFADL 123

Query: 99  PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
           PD +DWR+K  +T   NQ +CG+C+AFS   A++  + K T ++  LS QQ+VDCS+ +G
Sbjct: 124 PDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGALEAALAKKTGKLISLSEQQLVDCSLKNG 183

Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
           N GC GG + N   Y++    +  E  YPY+     C++     V  ++    +P  +E 
Sbjct: 184 NDGCNGGYMSNAFKYLE-DHSIEPESAYPYRATDGPCRYNESLGVGTVTDIGEIPEGNET 242

Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WI 274
           AL   +ATVGPI+++I+AS   F  Y  GIY    C+S ++NH +L VGY +      W+
Sbjct: 243 ALMEAVATVGPISIAIDASSLGFMFYRHGIYKSHWCSSKFLNHGVLAVGYGKLDGKPYWL 302

Query: 275 LKNWWSHHWGDNGY-MYLKRGNNRCGIANYAVYALI 309
           +KN W   WG  GY M  K  +N CGIA+ A +  +
Sbjct: 303 VKNSWGSGWGMKGYIMMAKDYHNMCGIASLADFPYV 338


>gi|164605518|dbj|BAF98584.1| CM0216.500.nc [Lotus japonicus]
          Length = 360

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 153/316 (48%), Gaps = 40/316 (12%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F+  ++++ K Y  +     +   ++SN  +   H       +HG T      SDL P  
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVT----RFSDLTPME 100

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLI------PDHLDWREKGFITPDWNQEDCGACY 123
           +        HS +    V  P   +S  I      P   DWRE G +TP  NQ  CG+C+
Sbjct: 101 F-------RHSVLGLRGVGLPSDADSAPILPTDNLPKDFDWREHGAVTPVKNQGSCGSCW 153

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCS-------IISGNLGCAGGSLRNTLNYVQF 176
           +FS   A++G  F ST E+  LS QQ+VDC          S + GC GG + +   Y+  
Sbjct: 154 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHQCDPEEAGSCDSGCNGGLMNSAFEYILN 213

Query: 177 AGGLMKEEDYPYKGKQ-SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSIN 235
            GG+M+EEDYPY G     CKF +  I   ++++SV+  +DE  +   L   GP+AV+IN
Sbjct: 214 NGGVMREEDYPYSGTNGGTCKFDKAKIAASVANFSVV-SRDEDQIAANLVKNGPLAVAIN 272

Query: 236 ASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHWG 284
           A     Q Y  G+     C S  +NH +LLVGY   S           WI+KN W  +WG
Sbjct: 273 AV--YMQTYVGGVSCPYVC-SKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGENWG 329

Query: 285 DNGYMYLKRGNNRCGI 300
           +NGY  + RG N CG+
Sbjct: 330 ENGYYKICRGRNICGV 345


>gi|33945877|emb|CAE45588.1| papain-like cysteine proteinase-like protein 1 [Lotus japonicus]
          Length = 359

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 153/317 (48%), Gaps = 41/317 (12%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F+  ++++ K Y  +     +   ++SN  +   H       +HG T      SDL P  
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVT----QFSDLTPME 100

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLI------PDHLDWREKGFITPDWNQEDCGACY 123
           +        HS +    V  P   +S  I      P   DWRE G +TP  NQ  CG+C+
Sbjct: 101 F-------QHSVLGLRGVGLPSDADSAPILPTDNLPKDFDWREHGAVTPVKNQGSCGSCW 153

Query: 124 AFSIASAIQGQIFKSTSEIEELSIQQVVDCS--------IISGNLGCAGGSLRNTLNYVQ 175
           +FS   A++G  F ST E+  LS QQ+VDC           S + GC GG + +   Y+ 
Sbjct: 154 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHQQCDPEEAGSCDSGCNGGLMNSAFEYIL 213

Query: 176 FAGGLMKEEDYPYKGKQ-SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234
             GG+M+EEDYPY G     CKF +  I   ++++SV+  +DE  +   L   GP+AV+I
Sbjct: 214 NNGGVMREEDYPYSGTNGGTCKFDKAKIAASVANFSVV-SRDEDQIAANLVKNGPLAVAI 272

Query: 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHW 283
           NA     Q Y  G+     C S  +NH +LLVGY   S           WI+KN W  +W
Sbjct: 273 NAV--YMQTYVGGVSCPYVC-SKKLNHGVLLVGYGSESYAPIRMKQKPYWIIKNSWGENW 329

Query: 284 GDNGYMYLKRGNNRCGI 300
           G+NGY  + RG N CG+
Sbjct: 330 GENGYYKICRGRNICGV 346


>gi|195379496|ref|XP_002048514.1| GJ14012 [Drosophila virilis]
 gi|194155672|gb|EDW70856.1| GJ14012 [Drosophila virilis]
          Length = 327

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/302 (34%), Positives = 160/302 (52%), Gaps = 18/302 (5%)

Query: 16  KYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM- 74
           +Y+K Y     +  +   ++ N + I  HN+    G   Y +  N  +D+    + K M 
Sbjct: 35  EYEKSYEDDGEEQLRMQIFKDNKQLIDRHNERYAAGEETYEMGVNQFTDMLATEFRKIML 94

Query: 75  TRLTHSRIRRTL--VRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
             L  S    ++  + SP + E   IP  +DWREKG +TP  NQ  CG+C+AFS A A++
Sbjct: 95  VNLNISDFTSSIEYIYSPANAE---IPSQVDWREKGAVTPVKNQGRCGSCWAFSAAGALE 151

Query: 133 GQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ 192
           GQ F  T ++  LS Q ++DCS    N GC GG     L YV+   G+  +  YPY+G  
Sbjct: 152 GQHFIQTKQLIPLSEQNLLDCSSRYNNHGCGGGWPAAALMYVRDNRGMDNDRAYPYEGHV 211

Query: 193 SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252
             C+F+R ++   ++   +   +DE AL   +AT GP++V+++A+   FQ Y  G+Y   
Sbjct: 212 GRCRFRRYSVSATVTQ-VMQVRRDEVALANAVATKGPVSVAVDAT--YFQHYRGGVYSHR 268

Query: 253 ACTSDYVNHAMLLVGYTRNS-----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVY 306
            C     NHAML+VGY  +      W++KN W   WG+ GYM L R   N C +A+YAV+
Sbjct: 269 -CRQQ-ANHAMLVVGYGSDQRGGDFWLIKNSWG-GWGEQGYMRLARNQGNLCHVASYAVF 325

Query: 307 AL 308
            +
Sbjct: 326 PI 327


>gi|260821900|ref|XP_002606341.1| hypothetical protein BRAFLDRAFT_118507 [Branchiostoma floridae]
 gi|229291682|gb|EEN62351.1| hypothetical protein BRAFLDRAFT_118507 [Branchiostoma floridae]
          Length = 546

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 155/289 (53%), Gaps = 18/289 (6%)

Query: 34  WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESN 93
           + +N + IH+ N+       GY+L  NHL+D      +K M   T+S      +   E  
Sbjct: 263 FTTNSRLIHSKNRANL----GYSLAINHLAD-RTDDELKMMRGRTYSPEPNNGLPFDEEE 317

Query: 94  ESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
            +V  IPD+++W  +G +TP  +Q  CG+C++F  A AI+G  FK T  +  LS Q ++D
Sbjct: 318 LAVTDIPDNINWAIRGAVTPVKDQAVCGSCWSFGAAEAIEGAWFKKTGLLVPLSQQNLMD 377

Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY-PYKGKQSICKFKRPNIVVDISSWSV 211
           CS   GN  C GG       +V   GG+     Y PY G    C F   ++   ++ +  
Sbjct: 378 CSWGYGNNACDGGEEWRAYEWVMKHGGIATAAHYGPYTGADGKCHFDPKHVGAVVTGYVN 437

Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS--DYVNHAMLLVGY- 268
           +  ++  ALK+ LA  GP+AV I+A+  TF  YA+G+Y D+ C +  + ++HA+L VGY 
Sbjct: 438 VTSENGTALKMALANFGPVAVGIDAAVKTFSFYANGVYYDKDCGNKPEDLDHAVLAVGYG 497

Query: 269 --------TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
                    ++ W++KN WS HWGDNGY+ + + +N CG+A  A Y  +
Sbjct: 498 SMPDSKGVMQDYWLIKNSWSTHWGDNGYVLISQKDNNCGVATDATYVKV 546


>gi|391346471|ref|XP_003747496.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 333

 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 159/306 (51%), Gaps = 16/306 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHY-IK 72
           +  + K+Y   A ++ +   + S  ++I  HN   ++G   Y L  N LSDL        
Sbjct: 28  KASHGKEYASPAAEAARLEAFNSKLQQIEAHNARFERGEVSYFLGLNALSDLTDAEIRAT 87

Query: 73  EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQ 132
           ++  +    IR  L  S         P+ +DWR    +T   NQ  CG+CY FS A AI+
Sbjct: 88  KLGAVVDEEIRAGLNASISEVTMPNAPESVDWRGTA-VTSVKNQASCGSCYTFSAAGAIE 146

Query: 133 GQIFKSTSEIEELSIQQVVDCS----IISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
             + K++ +  +LS QQ+VDC+    I + N GC GG    T+ +     G+ +E +YPY
Sbjct: 147 STLLKNSRKNYDLSEQQLVDCTLNRYIHNMNFGCGGGDPATTIQHA-LRHGISQEHEYPY 205

Query: 189 KGKQSI----CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
           +   +     C     ++ ++      +   DE+AL   +AT GPIAV++N     F  Y
Sbjct: 206 RSGNTQTHGRCSSTSGSVSLNNLRLMQVKAGDENALANAVATHGPIAVTLNGENSDFYSY 265

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGI 300
           + GIY++ +C +  +NHA+LLVGY  ++    WI+KN W   WG+NG+M L RG+NRCGI
Sbjct: 266 SGGIYNNRSCPTQ-INHAVLLVGYGSSNGQPYWIIKNSWGSTWGENGFMKLARGSNRCGI 324

Query: 301 ANYAVY 306
            + A Y
Sbjct: 325 VSAASY 330


>gi|50403821|gb|AAT76664.1| cathepsin L1 proteinase [Fasciola hepatica]
          Length = 326

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 151/310 (48%), Gaps = 26/310 (8%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDL----HPRH 69
           ++ Y K+Y   A D  ++  W+ N K I  HN     GL  YTL  N  +DL        
Sbjct: 25  KRMYNKEY-NGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQYTDLTFEEFKAK 83

Query: 70  YIKEMTR----LTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAF 125
           Y+ EM R    L+H          P    +  +PD +DWRE G++T   +Q +CG+C+AF
Sbjct: 84  YLTEMPRASDILSHG--------IPYEANNRAVPDKIDWRESGYVTGVKDQGNCGSCWAF 135

Query: 126 SIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV-QFAGGLMKEE 184
           S     +GQ  K+       S QQ+VDCS   GN GC GG + N   Y+ QF  GL  E 
Sbjct: 136 STTGTTEGQYMKNERTSISFSEQQLVDCSGPWGNNGCGGGLMENAYEYLKQF--GLETES 193

Query: 185 DYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLY 244
            YPY   +  C+  +   V  ++ +  +    E  LK  +    P AV+++     F +Y
Sbjct: 194 SYPYTAVEGQCRHSKQLGVAKVTGYYTVHSGSEVELKNLVGAERPAAVAVDVESD-FMMY 252

Query: 245 ASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCG 299
            SGIY  + C+   VNHA+L VGY        WI+KN W   WG+ GY+ + R   N CG
Sbjct: 253 RSGIYQSQTCSPLSVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCG 312

Query: 300 IANYAVYALI 309
           IA+ A   ++
Sbjct: 313 IASLASLPMV 322


>gi|211910935|gb|ACJ13096.1| cathepsin L [Globodera mexicana]
          Length = 293

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 145/260 (55%), Gaps = 3/260 (1%)

Query: 12  FPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
           + QK  +K Y  +  ++++ L + S  + I  HNQ   +G   + + ENH++DL    Y 
Sbjct: 34  YKQKHGRKAYADQDVENERMLTYLSAKQFIDKHNQAYIEGKVTFRVGENHIADLPFSEYK 93

Query: 72  K--EMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           K     RL    +RR             +P+ +DWR+KG++T   NQ  CG+C+AFS   
Sbjct: 94  KLNGYRRLLGDNLRRNASTFLAPMNVGDLPESVDWRDKGWVTEVKNQGMCGSCWAFSSTG 153

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           A++ Q  + T ++  LS Q ++DCS   GN+GC GG + N   Y++   G+ KE DYPYK
Sbjct: 154 ALEAQHARQTGQLISLSEQNLIDCSKKYGNMGCNGGIMDNAFQYIKDNNGVDKELDYPYK 213

Query: 190 GKQS-ICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
            K    C FKR ++    + +  +   DE  LK+ +AT GP +V+I+A   +FQLY  G+
Sbjct: 214 AKTGKKCLFKRNDVGATDTGFFDIAEGDEEKLKIAVATQGPASVAIDAGHRSFQLYTHGV 273

Query: 249 YDDEACTSDYVNHAMLLVGY 268
           Y ++ C+ + ++H +L+VGY
Sbjct: 274 YFEKECSPENLDHGVLVVGY 293


>gi|146168075|ref|XP_001016705.2| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|146145247|gb|EAR96460.2| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 343

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/217 (38%), Positives = 127/217 (58%), Gaps = 6/217 (2%)

Query: 98  IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQ-IFKSTSEIEELSIQQVVDCSII 156
           +P ++DWR KG +TP  +Q +CG+C+ FS   A++      + +    LS QQ++DC+  
Sbjct: 122 LPQYVDWRTKGVVTPVKDQGECGSCWTFSTTGALESHWALHTGNAPLLLSEQQLIDCAGA 181

Query: 157 SGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQD 216
             N GC GG       Y+ +AGGL  E DYPY+G  + C+F R  +   + S   +  QD
Sbjct: 182 FNNFGCDGGLPSQAYEYISYAGGLETEGDYPYEGTDNSCEFNRAQVAAKVVSSYNITFQD 241

Query: 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS--DYVNHAMLLVGY--TRNS 272
           E+ L   LATVGP++++   +   F  Y  GIY + +C+   + VNHA+L VGY  T N 
Sbjct: 242 ENELIYHLATVGPVSIAYECT-DDFMDYEGGIYSNPSCSKSPEDVNHAVLAVGYNLTGNY 300

Query: 273 WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           +I+KN W   WG NGY Y++ G+N CG+A+ A Y ++
Sbjct: 301 YIVKNSWGEDWGINGYFYIELGSNMCGLADCASYPIV 337


>gi|226501480|ref|NP_001150266.1| cysteine protease 1 precursor [Zea mays]
 gi|195637948|gb|ACG38442.1| cysteine protease 1 precursor [Zea mays]
          Length = 462

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 157/293 (53%), Gaps = 19/293 (6%)

Query: 27  DSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEM--TRLTHSRIRR 84
           D + ++ W  N + +  HN+ A +  HG+ L  N  +DL    +       R+  +R R 
Sbjct: 67  DRRFRVFWD-NLRFVDAHNERAAE--HGFRLGMNQFADLTNDEFRAAYLGARIPAARRRG 123

Query: 85  TLV--RSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
           T V  R      +  +P+ +DWREKG + P  NQ  CG+C+AFS  S+++      T E+
Sbjct: 124 TAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEM 183

Query: 143 EELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNI 202
             LS Q++V+CS   GN GC GG +    +++   GG+  E DYPYK     C   R N 
Sbjct: 184 VTLSEQELVECSTDGGNSGCNGGLMDAAFDFIIKNGGIDTEGDYPYKAVDGKCDINRENA 243

Query: 203 -VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNH 261
            VV I  +  +P  DE +L+  +A   P++V+I A    FQLY +G++    CT++ ++H
Sbjct: 244 KVVSIDGFEDVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYKAGVFSG-TCTTN-LDH 300

Query: 262 AMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNN----RCGIANYAVY 306
            ++ VGY     ++ WI++N W   WG++GY+ ++R  N    +CGIA  A Y
Sbjct: 301 GVVAVGYGTENGKDYWIVRNSWGAKWGEDGYIRMERNVNATTGKCGIAMMASY 353


>gi|33333694|gb|AAQ11965.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 160/300 (53%), Gaps = 15/300 (5%)

Query: 19  KDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78
           K YR    + ++   +Q N   I  HN++ ++G   +  +    +D+    ++  +    
Sbjct: 32  KTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFADMTHEEFLDLLKLQG 91

Query: 79  HSRIRRTLVRSPESNESVLIP-DHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFK 137
              +    V      ++ +   D +DWRE+G +TP  +Q +CG+C+AFS   AI+GQ FK
Sbjct: 92  VPALPSNAVHFDNFEDTDMEEKDAVDWREEGAVTPVKDQANCGSCWAFSAVGAIEGQFFK 151

Query: 138 STSEIEELSIQQVVDCSIIS-GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICK 196
               +  LS Q++VDC+    GN GC GG +    ++VQ   G+  EE YPY+G++S CK
Sbjct: 152 KNGTLVSLSAQELVDCATEEYGNNGCRGGLMGQAFDFVQ-DEGIQTEESYPYEGRRSSCK 210

Query: 197 FKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA-CT 255
            K  + V  + ++  + P DE  +  T+A  GP+AV+I AS  +F  Y  GI D++  C+
Sbjct: 211 -KSGDYVTKVKTY--VFPLDEQEMARTVAAKGPVAVAIEASQLSF--YDKGIVDEKCRCS 265

Query: 256 S--DYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           +  + +NH +L+VGY   +    WI+KN W   WG+ GY  LK+    CGI  Y  Y ++
Sbjct: 266 NKREDLNHGVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIDYYNTYPIL 325


>gi|10798509|emb|CAC12805.1| procathepsin L3 [Fasciola hepatica]
          Length = 311

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 154/305 (50%), Gaps = 16/305 (5%)

Query: 14  QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSD----LHPRH 69
           ++ Y K+Y     + ++ + W  N K I  HN    +GL  Y L  N  +D         
Sbjct: 10  KRMYNKEYNGADEEHRRNI-WGKNVKHIEEHNLRHDRGLVTYKLGLNQFTDPTFEEFQAK 68

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           Y+ EM+ ++ S +   +    E N+   +P  +DWRE G++T   +Q  CG+C+AFS   
Sbjct: 69  YLMEMSPVSES-LSDGVSYEAEGND---VPASIDWREYGYVTEVKDQGQCGSCWAFSAVG 124

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYK 189
           AI+GQ  K        S QQ+VDC+   GN GC GG + N   Y++ + GL     YPY+
Sbjct: 125 AIEGQYVKKFQNQTLFSEQQLVDCTRRFGNHGCGGGWMENAYKYLKNS-GLETASYYPYQ 183

Query: 190 GKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIY 249
             +  C++++   V  ++    +   DE  L   +   GP AV+++A    F +Y SGI+
Sbjct: 184 AVEYQCQYRKELGVAKVTGAYTVHSGDEMKLMPMVGREGPAAVAVDAQS-DFYMYESGIF 242

Query: 250 DDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYA 304
             + CTS  V HA+L VGY   S    WILKN W   WG++GYM   R   N C IA+ A
Sbjct: 243 QSQTCTSRSVTHAVLAVGYGTESGTDYWILKNSWGKWWGEDGYMRFARNRGNMCAIASVA 302

Query: 305 VYALI 309
              ++
Sbjct: 303 SVPMV 307


>gi|2499879|sp|Q40143.1|CYSP3_SOLLC RecName: Full=Cysteine proteinase 3; Flags: Precursor
 gi|1235545|emb|CAA88629.1| pre-pro-cysteine proteinase [Solanum lycopersicum]
          Length = 356

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 145/279 (51%), Gaps = 13/279 (4%)

Query: 37  NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESV 96
           N K I +HN+   +GL  Y L  N  +DL    + K   +L  S+      +      +V
Sbjct: 84  NLKMIRSHNR---KGLS-YKLGINEFTDLTWDEFRKH--KLGASQNCSATTKGNLKLTNV 137

Query: 97  LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSII 156
           ++P+  DWR+ G ++P   Q  CG+C+ FS   A++    ++  +   LS QQ+VDC+  
Sbjct: 138 VLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGA 197

Query: 157 SGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQD 216
             N GC GG       Y++F GGL  EE YPY GK  ICKF + NI V + S   +    
Sbjct: 198 FNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANIGVKVISSVNITLGA 257

Query: 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC--TSDYVNHAMLLVGYTRNS-- 272
           E+ LK  +A V P++V+       F+ Y SG+Y    C  T   VNHA+L VGY   +  
Sbjct: 258 EYELKYAVALVRPVSVAFEVV-KGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGT 316

Query: 273 --WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
             W++KN W   WG++GY  ++ G N CG+A  A Y ++
Sbjct: 317 PYWLIKNSWGADWGEDGYFKMEMGKNMCGVATCASYPIV 355


>gi|159464745|ref|XP_001690602.1| cystein endopsptidase [Chlamydomonas reinhardtii]
 gi|158280102|gb|EDP05861.1| cystein endopsptidase [Chlamydomonas reinhardtii]
          Length = 616

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 147/300 (49%), Gaps = 35/300 (11%)

Query: 40  KIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVL-- 97
           K+  HN         Y L+ N  +D HP  +   M  L + R++  + + P+  + ++  
Sbjct: 301 KVQAHNTRPDAS---YKLKLNQWADWHPEEWRSAM--LPNLRLKPQVQQRPDGTDVLISE 355

Query: 98  ----------------------IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQI 135
                                 +P  +DWR  G      +Q  CG+CY F+    + G  
Sbjct: 356 MPGAPYRPKSTFRGTPGLSRADLPPSVDWRGTGADPGVKDQGMCGSCYTFAATGTMDGTW 415

Query: 136 FKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSIC 195
           F +T +    S QQ++DC+   G  GC GG  +  LNYV   GG+  E+DY Y+G+   C
Sbjct: 416 FVATGQRRSFSEQQIIDCAWDYGPNGCFGGYYQPVLNYVAEQGGMALEQDYTYRGEPGYC 475

Query: 196 KFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255
           +      V   S +  +  ++E AL   +A  GPIAVS+NA P  F  Y+ G++D+ ACT
Sbjct: 476 RASNHTRVGLFSGYMNVESRNELALMEAVAKYGPIAVSVNADPEAFSFYSEGVFDEPACT 535

Query: 256 SDY--VNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
           +    ++H + L GY     ++ W+++N WSH WGD+GY+ + RG + CGIA     AL+
Sbjct: 536 TRMRDLDHTVTLFGYGSQDGKDYWLVRNSWSHFWGDDGYIKIVRGKHDCGIATDPAVALV 595


>gi|457756|emb|CAA82995.1| cysteine proteinase [Vicia sativa]
          Length = 358

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 25/309 (8%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   + K+ K Y  K     +   +++N  K   H +      HG T   +  +    R 
Sbjct: 43  FTSFKSKFSKSYATKEEHDYRFGVFKANLIKAKLHQKLDPTAEHGITKFSDLTASEFRRQ 102

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIAS 129
           ++    RL      +     P +N    +P+  DWREKG +TP  +Q  CG+C+AFS   
Sbjct: 103 FLGLNKRLRLPAHAQKAPILPTTN----LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTG 158

Query: 130 AIQGQIFKSTSEIEELSIQQVVDCSII-------SGNLGCAGGSLRNTLNYVQFAGGLMK 182
           A++G  + +T ++  LS QQ+VDC  +       S + GC GG + N   Y+  +GG+++
Sbjct: 159 ALEGAHYLATGKLVSLSEQQLVDCDHVCDPEEAGSCDSGCNGGLMNNAFEYLLQSGGVVQ 218

Query: 183 EEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQ 242
           E+DY Y G+   CKF +  +V  +S++SV+   DE  +   L   GP+AV+INA+    Q
Sbjct: 219 EKDYAYTGRDGSCKFDKSKVVASVSNFSVV-SLDEEQIAANLVKNGPLAVAINAA--WMQ 275

Query: 243 LYASGIYDDEACTSDYVNHAMLLVGYTRNS-----------WILKNWWSHHWGDNGYMYL 291
            Y SG+     C    ++H +LLVG+ + +           WI+KN W  +WG+ GY  +
Sbjct: 276 AYMSGVSCPYVCAKARLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKI 335

Query: 292 KRGNNRCGI 300
            RG N CG+
Sbjct: 336 CRGRNVCGV 344


>gi|45550334|gb|AAS67923.1| cathepsin L [Artemia franciscana]
          Length = 226

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 129/222 (58%), Gaps = 7/222 (3%)

Query: 95  SVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCS 154
           +V +P+ +DWREKG +TP   Q  C +C AFS   A++ Q F+ T ++  LS Q ++DCS
Sbjct: 5   NVTVPESVDWREKGAVTPVKYQGQCASCLAFSPTGALESQTFRKTGKLISLSEQNLIDCS 64

Query: 155 IISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPP 214
              GNLGC GG +     Y++   G+  E  Y Y+ K++ C+    N       +  +P 
Sbjct: 65  GEYGNLGCKGGWISQAFEYIKDNKGIDTENKYHYEAKENFCRDNPRNRGAVALGFVNIPS 124

Query: 215 QDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDY--VNHAMLLVGYTRNS 272
            +E  LK  +ATVGP++  I+ S   FQ Y+ G+Y + +C + +  +NHA+L++G   ++
Sbjct: 125 GEEDKLKAAVATVGPVSAVIDVSHEGFQFYSKGVYYEPSCKTSFEHLNHAVLVIGCGSDN 184

Query: 273 ----WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
               W++KN WS HWGD GY+ + R   N CG+A  A+Y ++
Sbjct: 185 GEDYWLVKNSWSKHWGDEGYLKIARNRKNHCGVATAALYPIV 226


>gi|449516391|ref|XP_004165230.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 387

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 157/315 (49%), Gaps = 35/315 (11%)

Query: 10  FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
           F   ++++ K Y  +    ++   +++N ++   H       +HG T      SDL P  
Sbjct: 59  FSLFKRRFGKSYATEEEHDRRFKIFKANMRRAERHQSFDPSAIHGVT----QFSDLTPFE 114

Query: 70  YIKEMTRLTHSRIRRTLVRSPESNESVLIPDH-----LDWREKGFITPDWNQEDCGACYA 124
           + K    L   R+R  +    ++N + ++P        DWR+ G +T   NQ  CG+C++
Sbjct: 115 FRKAFLGLRGHRLRLPV----DTNAAPILPTENLPIDFDWRQHGGVTRVKNQGSCGSCWS 170

Query: 125 FSIASAIQGQIFKSTSEIEELSIQQVVDCS-------IISGNLGCAGGSLRNTLNYVQFA 177
           FS   A++G  F +T E+  LS QQ+VDC          + + GC GG + +   Y   A
Sbjct: 171 FSTTGALEGANFLATGELVSLSEQQLVDCDHECDPEEEDACDSGCNGGLMNSAFEYTLKA 230

Query: 178 GGLMKEEDYPYKG-KQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINA 236
           GGLMKE+DYPY G  ++ C F +  I   I+++SV+   DE  +   L   GP+A++INA
Sbjct: 231 GGLMKEQDYPYAGIDRNTCNFDKSKIAASIANFSVVNSIDEDQIAANLVKNGPLAIAINA 290

Query: 237 SPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-----------TRNSWILKNWWSHHWGD 285
                Q Y  G+     C S  ++H +LLVGY            ++ WI+KN W   WG+
Sbjct: 291 V--FMQTYIGGVSCPFIC-SKRLDHGVLLVGYGSAGYAPIRMRDKDYWIIKNSWGESWGE 347

Query: 286 NGYMYLKRGNNRCGI 300
           NGY  + RG N CG+
Sbjct: 348 NGYYKICRGRNICGV 362


>gi|260516654|gb|ACX43954.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516656|gb|ACX43955.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516658|gb|ACX43956.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516660|gb|ACX43957.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516662|gb|ACX43958.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516664|gb|ACX43959.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516666|gb|ACX43960.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516668|gb|ACX43961.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516670|gb|ACX43962.1| cysteine protease 2 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 154/299 (51%), Gaps = 15/299 (5%)

Query: 9   IFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPR 68
           +F    K+Y K Y   A  S +   +++N + I  HN  A      YT+  N  +DL   
Sbjct: 41  MFTAFMKQYSKAY-SHAEFSSRFNQFKANVETIRLHNTLANAS---YTMGLNEFADLSFE 96

Query: 69  HYIKEMTRLTHSRIRRTLVRSPESNESV-LIPDHLDWREKGFITPDWNQEDCGACYAFSI 127
            +  +     H  + R   RS   ++ V   P  +DWR    +TP  +Q  CG+C+AFS 
Sbjct: 97  EFKGKYFGYKH--VEREFARSNNLHQEVEAAPTSIDWRTSNAVTPIKDQGQCGSCWAFSA 154

Query: 128 ASAIQGQ-IFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY 186
             +I+G  + +    +  LS QQ+VDCS   GN GC GG +     Y+    G+  E  Y
Sbjct: 155 TGSIEGAWVLQGKHTLTSLSEQQLVDCSTSYGNAGCNGGLMDYAFEYIIANKGICAESAY 214

Query: 187 PYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS 246
           PYKG   +C+ K    VV IS +  +   DE +L   + TVGP++V+I A    FQ Y+S
Sbjct: 215 PYKGVGGLCQ-KSCTKVVTISGYKDVASGDEASLLNAVGTVGPVSVAIEADQAGFQFYSS 273

Query: 247 GIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIA 301
           G++    C  + ++H +L VGY    +++ WI+KN W   WG++GY+ + R  N+CGIA
Sbjct: 274 GVFSG-TCGHN-LDHGVLAVGYGTTGSQDYWIVKNSWGTSWGESGYIRMIRNKNQCGIA 330


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.134    0.425 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,185,496,068
Number of Sequences: 23463169
Number of extensions: 211331059
Number of successful extensions: 505656
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5230
Number of HSP's successfully gapped in prelim test: 1671
Number of HSP's that attempted gapping in prelim test: 484643
Number of HSP's gapped (non-prelim): 7947
length of query: 309
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 167
effective length of database: 9,027,425,369
effective search space: 1507580036623
effective search space used: 1507580036623
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)