Query psy1705
Match_columns 309
No_of_seqs 286 out of 1636
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 20:32:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj3_A Cathepsin L-like protei 100.0 1.4E-89 4.8E-94 629.3 34.3 306 1-309 13-331 (331)
2 3qt4_A Cathepsin-L-like midgut 100.0 9.9E-90 3.4E-94 628.9 32.0 301 1-309 18-329 (329)
3 2c0y_A Procathepsin S; proenzy 100.0 1.1E-88 3.8E-93 620.2 31.6 303 3-309 5-315 (315)
4 3tnx_A Papain; hydrolase, cyto 100.0 5.3E-88 1.8E-92 622.3 35.2 297 2-308 58-361 (363)
5 1cs8_A Human procathepsin L; p 100.0 3.7E-88 1.3E-92 617.0 32.2 300 5-309 7-316 (316)
6 1by8_A Protein (procathepsin K 100.0 3E-88 1E-92 617.1 31.1 302 3-309 4-314 (314)
7 2o6x_A Procathepsin L1, secret 100.0 3.5E-87 1.2E-91 609.1 30.5 295 8-309 3-306 (310)
8 1pci_A Procaricain; zymogen, h 100.0 1.7E-85 5.7E-90 600.6 32.8 295 2-309 14-321 (322)
9 1xkg_A DER P I, major mite fec 100.0 7.7E-82 2.6E-86 573.2 29.4 285 8-309 6-302 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 1.3E-74 4.6E-79 546.0 24.1 275 25-307 135-433 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 6.9E-73 2.3E-77 517.5 19.0 269 28-308 2-311 (325)
12 3pbh_A Procathepsin B; thiol p 100.0 2.1E-69 7.1E-74 493.5 23.3 260 37-308 11-313 (317)
13 3kwz_A Cathepsin K; enzyme inh 100.0 7.6E-69 2.6E-73 465.8 24.3 210 98-309 1-215 (215)
14 2xu3_A Cathepsin L1; hydrolase 100.0 1.8E-68 6.3E-73 464.8 24.5 210 98-309 1-220 (220)
15 3ovx_A Cathepsin S; hydrolase, 100.0 1.2E-68 4.2E-73 465.5 23.1 211 98-309 2-218 (218)
16 8pch_A Cathepsin H; hydrolase, 100.0 3.1E-68 1E-72 463.6 22.1 210 98-308 1-217 (220)
17 2cio_A Papain; hydrolase/inhib 100.0 2.3E-67 7.8E-72 455.2 25.6 206 98-309 1-211 (212)
18 1o0e_A Ervatamin C; plant cyst 100.0 4.5E-67 1.5E-71 451.9 25.5 205 98-309 1-207 (208)
19 2bdz_A Mexicain; cysteine prot 100.0 5.9E-67 2E-71 453.1 25.5 206 98-309 1-211 (214)
20 3ioq_A CMS1MS2; caricaceae, cy 100.0 3.7E-67 1.3E-71 454.3 24.2 206 98-309 1-211 (213)
21 1m6d_A Cathepsin F, catsf; pap 100.0 2.5E-67 8.6E-72 455.7 22.3 207 98-309 1-213 (214)
22 3f5v_A DER P 1 allergen; aller 100.0 3.6E-67 1.2E-71 457.4 22.3 210 95-309 7-222 (222)
23 1cqd_A Protein (protease II); 100.0 1.3E-66 4.6E-71 453.1 25.2 208 97-309 2-217 (221)
24 3p5u_A Actinidin; SAD, cystein 100.0 9.1E-67 3.1E-71 454.1 23.1 209 98-309 1-217 (220)
25 1ppo_A Protease omega; hydrola 100.0 1.6E-66 5.6E-71 451.0 24.2 206 98-309 1-215 (216)
26 3i06_A Cruzipain; autocatalyti 100.0 2.2E-66 7.4E-71 450.1 24.2 205 98-309 1-214 (215)
27 1iwd_A Ervatamin B; cysteine p 100.0 3.3E-66 1.1E-70 448.7 24.9 206 98-309 1-214 (215)
28 2b1m_A SPE31; papain-like, sug 100.0 1.9E-66 6.5E-71 458.7 23.7 209 97-309 1-224 (246)
29 1yal_A Chymopapain; hydrolase, 100.0 4E-66 1.4E-70 449.2 24.2 206 98-309 1-215 (218)
30 3f75_A Toxopain-2, cathepsin L 100.0 1.5E-66 5.2E-71 454.2 20.3 211 96-309 5-224 (224)
31 3u8e_A Papain-like cysteine pr 100.0 2.9E-66 1E-70 451.4 21.4 207 98-309 1-219 (222)
32 1s4v_A Cysteine endopeptidase; 100.0 2.2E-65 7.6E-70 447.6 24.0 209 97-309 1-219 (229)
33 2fo5_A Cysteine proteinase EP- 100.0 2.9E-65 9.9E-70 453.8 22.6 209 97-309 3-224 (262)
34 2oul_A Falcipain 2; cysteine p 100.0 5.2E-65 1.8E-69 448.5 24.0 207 95-309 15-240 (241)
35 3bwk_A Cysteine protease falci 100.0 7.2E-65 2.5E-69 448.2 23.2 207 95-309 17-242 (243)
36 3cbj_A Cathepsin B; cathepsin 100.0 3.7E-62 1.3E-66 436.5 19.5 209 96-308 5-256 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 1.3E-61 4.3E-66 430.4 20.0 207 97-308 2-252 (254)
38 1deu_A Procathepsin X; cystein 100.0 2.5E-61 8.6E-66 432.8 20.2 206 95-308 33-274 (277)
39 2wbf_X Serine-repeat antigen p 100.0 3.3E-57 1.1E-61 404.7 19.8 204 100-305 9-254 (265)
40 3ois_A Cysteine protease; alph 100.0 1.8E-55 6.2E-60 398.0 15.0 232 55-294 14-272 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 2.9E-43 1E-47 330.4 12.6 205 97-308 47-422 (453)
42 2e01_A Cysteine proteinase 1; 100.0 1.5E-41 5.3E-46 319.0 18.2 205 97-308 52-423 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 2.4E-35 8.3E-40 271.3 18.5 182 109-293 21-355 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 8.3E-20 2.9E-24 138.5 9.6 74 2-79 17-90 (106)
45 2l95_A Crammer, LP06209P; cyst 99.8 1.4E-19 4.8E-24 131.3 7.1 70 7-78 7-76 (80)
46 1pxv_A Cysteine protease; hydr 98.0 7.8E-05 2.7E-09 60.2 11.3 126 114-294 25-162 (183)
47 1cv8_A Staphopain; cysteine pr 97.9 0.00029 9.8E-09 56.8 12.7 124 114-293 16-152 (174)
48 1x9y_A Cysteine proteinase; ha 97.8 0.00029 9.8E-09 62.8 12.2 125 114-293 201-337 (367)
49 3erv_A Putative C39-like pepti 93.0 0.29 9.8E-06 41.9 7.6 67 211-280 126-197 (236)
50 3bb7_A Interpain A; cysteine p 75.1 6.8 0.00023 34.9 6.9 59 218-293 239-298 (321)
51 1dki_A Pyrogenic exotoxin B zy 74.1 8.6 0.00029 34.9 7.5 55 217-293 289-344 (371)
52 4d8b_A Streptopain; papain fol 66.9 12 0.00041 32.2 6.4 55 217-293 171-226 (261)
53 2r9f_A Calpain-1 catalytic sub 58.7 19 0.00066 32.1 6.5 58 217-281 210-275 (339)
54 2nqa_A Calpain 8; calpain, cal 51.7 30 0.001 30.7 6.5 57 218-281 206-270 (326)
55 1ziv_A Calpain 9; cysteine pro 45.2 41 0.0014 29.9 6.4 58 217-281 209-274 (339)
56 3bow_A Calpain-2 catalytic sub 34.0 66 0.0023 31.6 6.5 58 217-281 225-290 (714)
57 1sgh_B Ezrin-radixin-moesin bi 27.7 72 0.0025 18.6 3.2 32 1-35 6-37 (39)
58 1th5_A NIFU1; iron-sulfur clus 26.4 30 0.001 23.5 1.7 27 110-138 37-63 (74)
59 1qxp_A MU-like calpain; M-calp 20.1 80 0.0028 31.9 4.2 58 217-281 225-290 (900)
No 1
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=1.4e-89 Score=629.32 Aligned_cols=306 Identities=31% Similarity=0.583 Sum_probs=276.3
Q ss_pred CChHHHHHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccC
Q psy1705 1 MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHS 80 (309)
Q Consensus 1 ~~~~~~~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~ 80 (309)
.++..+...|++||++|+|+|.+.+|+.+|+.||++|+++|++||+++++++.+|++|+|+|+|||.|||++++++...+
T Consensus 13 ~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~ 92 (331)
T 3qj3_A 13 LPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMP 92 (331)
T ss_dssp CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCC
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccc
Confidence 36888999999999999999998889999999999999999999999888899999999999999999999988765433
Q ss_pred ccc--cc-cccCCC---CCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCC--CCcCCHHHHHh
Q psy1705 81 RIR--RT-LVRSPE---SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSE--IEELSIQQVVD 152 (309)
Q Consensus 81 ~~~--~~-~~~~~~---~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~--~~~lS~q~l~d 152 (309)
... .. .+..+. .....+||++||||++|+||||||||.||||||||++++||++++++++. .+.||+|+|+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~Lvd 172 (331)
T 3qj3_A 93 ADLHKNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVD 172 (331)
T ss_dssp SSTTTTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHHH
T ss_pred ccccccCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHhh
Confidence 211 11 121110 00134899999999999999999999999999999999999999999998 89999999999
Q ss_pred hcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEE
Q psy1705 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAV 232 (309)
Q Consensus 153 c~~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v 232 (309)
|+.. +.||+||++..|++|+++++||++|++|||.+.++.|........+++++|..|+..++++||++|+++|||+|
T Consensus 173 C~~~--~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v 250 (331)
T 3qj3_A 173 CVPN--ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAV 250 (331)
T ss_dssp HCTT--SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHCCEEE
T ss_pred hccC--CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCCCEEE
Confidence 9974 88999999999999999888999999999999999999888888889999999987799999999999999999
Q ss_pred EEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecC-CcccccceeeEe
Q psy1705 233 SINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYA 307 (309)
Q Consensus 233 ~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p 307 (309)
+|++. .+|++|++|||..+.|+...++|||+|||| |++|||||||||++||++|||||+|+. |.|||++.++||
T Consensus 251 ~i~a~-~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p 329 (331)
T 3qj3_A 251 AFDAD-DPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVASVP 329 (331)
T ss_dssp EECCC-TTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEE
T ss_pred EEEcc-cccccccCceEeCCCCCCCcCCEEEEEEEEeccCCceEEEEEcCCCCCcCCCCEEEEEcCCCCccCcCCceeee
Confidence 99998 559999999999999966789999999999 678999999999999999999999976 999999999999
Q ss_pred eC
Q psy1705 308 LI 309 (309)
Q Consensus 308 ~~ 309 (309)
+|
T Consensus 330 ~v 331 (331)
T 3qj3_A 330 TL 331 (331)
T ss_dssp EC
T ss_pred eC
Confidence 86
No 2
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=9.9e-90 Score=628.89 Aligned_cols=301 Identities=29% Similarity=0.598 Sum_probs=271.8
Q ss_pred CChHHHHHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccC
Q psy1705 1 MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHS 80 (309)
Q Consensus 1 ~~~~~~~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~ 80 (309)
+++.++...|++||++|+|.|.+.+|+.+|+.||++|+++|++||+++++++.+|++|+|+|+|||.|||++ +++...+
T Consensus 18 ~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~ 96 (329)
T 3qt4_A 18 LPKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKA 96 (329)
T ss_dssp --CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCC
T ss_pred cCHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCccc
Confidence 367788999999999999999988899999999999999999999988888899999999999999999999 5443321
Q ss_pred c-c--cc--c-cccCCCCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhc
Q psy1705 81 R-I--RR--T-LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCS 154 (309)
Q Consensus 81 ~-~--~~--~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~ 154 (309)
. . .. . .+..+ ..+||++||||++ +||||||||.||||||||++++||+++++++++.+.||+|+|+||+
T Consensus 97 ~~~~~~~~~~~~~~~~----~~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~ 171 (329)
T 3qt4_A 97 QKPKHPENLRMPYVSS----KKPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCS 171 (329)
T ss_dssp C------CCEEECCCC----CSCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHC
T ss_pred ccccccccccccccCC----ccCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhc
Confidence 1 1 00 1 22222 2489999999999 9999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHHhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEE
Q psy1705 155 IISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSI 234 (309)
Q Consensus 155 ~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~ 234 (309)
..+++.||+||++..|++|++++ ||++|++|||.+.++.|+........++++|..++..++++||++|+++|||+|+|
T Consensus 172 ~~~g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i 250 (329)
T 3qt4_A 172 SSYGNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFDSSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAI 250 (329)
T ss_dssp GGGTCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCCGGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEE
T ss_pred cccCCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCCcccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEE
Confidence 76678899999999999999999 99999999999999999987777778999999998779999999999999999999
Q ss_pred EeCChhhhccCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecC-CcccccceeeEeeC
Q psy1705 235 NASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309 (309)
Q Consensus 235 ~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 309 (309)
++. .+|++|++|||..+.|+...++|||+|||| |++|||||||||++||++|||||+|+. |.|||++.++||+|
T Consensus 251 ~a~-~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~yp~v 329 (329)
T 3qt4_A 251 DAT-DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSDNGQDYWILKNSWGSGWGESGYWRQVRNYGNNCGIATAASYPAL 329 (329)
T ss_dssp CCC-GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTTTCEEEEC
T ss_pred ecC-hhhhhccCceeecCCCCCCcCCEEEEEEEEEeeCCccEEEEEeCCCCcccCCcEEEEEeCCCCccCCCCceeEeeC
Confidence 998 699999999999999966789999999999 578999999999999999999999976 99999999999986
No 3
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1.1e-88 Score=620.20 Aligned_cols=303 Identities=35% Similarity=0.667 Sum_probs=268.9
Q ss_pred hHHHHHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccCcc
Q psy1705 3 NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRI 82 (309)
Q Consensus 3 ~~~~~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~ 82 (309)
+.++...|++||++|+|.|.+.+|+.+|+.||++|+++|++||++...|+.+|++|+|+|+|||.+||++++++...+..
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 45788899999999999998888999999999999999999999866677899999999999999999887765543221
Q ss_pred c-cc-cccCCCCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhc-CCCCC
Q psy1705 83 R-RT-LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCS-IISGN 159 (309)
Q Consensus 83 ~-~~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~-~~~~~ 159 (309)
. +. .+..+ ...+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+ ..+++
T Consensus 85 ~~~~~~~~~~---~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~~ 161 (315)
T 2c0y_A 85 WQRNITYKSN---PNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGN 161 (315)
T ss_dssp GGSCBCC---------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTC
T ss_pred ccCCccccCc---ccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccCC
Confidence 1 11 22211 2347999999999999999999999999999999999999999999999999999999999 55568
Q ss_pred CCCCCCchHHHHHHHHHhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCCh
Q psy1705 160 LGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPH 239 (309)
Q Consensus 160 ~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~ 239 (309)
.||+||++..|++|+.+++||++|++|||.+.++.|+..+.....++++|..|+..++++||++|+++|||+|+|+++.+
T Consensus 162 ~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~ 241 (315)
T 2c0y_A 162 KGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHP 241 (315)
T ss_dssp CGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSH
T ss_pred CCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCCcccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecCch
Confidence 99999999999999996449999999999999999997766667889999999877999999999999999999999767
Q ss_pred hhhccCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEec-CCcccccceeeEeeC
Q psy1705 240 TFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309 (309)
Q Consensus 240 ~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cgi~~~~~~p~~ 309 (309)
+|++|++|||..+.|+. .++|||+|||| |++|||||||||++||++|||||+|+ .|.|||++.++||++
T Consensus 242 ~f~~Y~~Gvy~~~~c~~-~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 242 SFFLYRSGVYYEPSCTQ-NVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 315 (315)
T ss_dssp HHHTEEEEEECCTTCCS-CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred hhhccCCCcccCCCCCC-cCCEEEEEEEEeecCCCcEEEEEcCCCCCcCCCcEEEEEcCCCCccCcCceeEEeeC
Confidence 99999999999988954 78999999999 57899999999999999999999997 599999999999986
No 4
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=5.3e-88 Score=622.30 Aligned_cols=297 Identities=30% Similarity=0.525 Sum_probs=261.4
Q ss_pred ChHHHHHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccCc
Q psy1705 2 TNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSR 81 (309)
Q Consensus 2 ~~~~~~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~ 81 (309)
++++++.+|++||++|+|+|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++++++...+.
T Consensus 58 s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~----~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~ 133 (363)
T 3tnx_A 58 STERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK----NNSYWLGLNVFADMSNDEFKEKYTGSIAGN 133 (363)
T ss_dssp CHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS----CCSEEECSCTTTTSCHHHHHHHHSCSSCSC
T ss_pred CHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC----CCCeEEeccccccCCHHHHHHHhccccccc
Confidence 6889999999999999999999989999999999999999999986 579999999999999999999887654332
Q ss_pred cc-cc-cccCCCCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCC
Q psy1705 82 IR-RT-LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGN 159 (309)
Q Consensus 82 ~~-~~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~ 159 (309)
.. .. ...........+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+.. +
T Consensus 134 ~~~~~~~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~--~ 211 (363)
T 3tnx_A 134 YTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRR--S 211 (363)
T ss_dssp CCCSSSSSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--S
T ss_pred ccccccccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCC--C
Confidence 21 11 11111111345899999999999999999999999999999999999999999999999999999999864 7
Q ss_pred CCCCCCchHHHHHHHHHhCCCCCCCCCcCCCCCCccCCC-CCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCC
Q psy1705 160 LGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFK-RPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASP 238 (309)
Q Consensus 160 ~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~ 238 (309)
.||+||++..|++|+.+. ||++|++|||.+.++.|... ......++.++..++..++..++.+|+ +|||+|++++..
T Consensus 212 ~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~-~gPvsvai~a~~ 289 (363)
T 3tnx_A 212 YGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIA-NQPVSVVLEAAG 289 (363)
T ss_dssp CTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHT-TSCEEEEECCCS
T ss_pred CCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHH-cCCcEEEEEecc
Confidence 899999999999999998 99999999999988877654 334456788888888888999999998 599999999877
Q ss_pred hhhhccCCceecCCCCCCCCCCeEEEEEEeCCCEEEEEcCCCCCCCCCceEEEEecC----CcccccceeeEee
Q psy1705 239 HTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGN----NRCGIANYAVYAL 308 (309)
Q Consensus 239 ~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGyg~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~ 308 (309)
++|++|++|||..+ | ....+|||+|||||++|||||||||++|||+|||||+|+. |+|||++.|+|||
T Consensus 290 ~~F~~Y~sGVy~~~-~-~~~lnHaV~iVGyG~~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPi 361 (363)
T 3tnx_A 290 KDFQLYRGGIFVGP-C-GNKVDHAVAAVGYGPNYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 361 (363)
T ss_dssp HHHHTEEEEEECCC-C-CSCCCEEEEEEEEETTEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEE
T ss_pred hhhhCCCCCEECCC-C-CCCCCeEEEEEEcCCCcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeecc
Confidence 89999999999876 6 3568999999999999999999999999999999999965 4599999999998
No 5
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=3.7e-88 Score=617.04 Aligned_cols=300 Identities=35% Similarity=0.690 Sum_probs=267.8
Q ss_pred HHHHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccCcccc
Q psy1705 5 EWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRR 84 (309)
Q Consensus 5 ~~~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~ 84 (309)
++...|++||++|+|+| +.+|+.+|+.||++|+++|++||+++..++.+|++|+|+|+|||.+||++++++..++....
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~ 85 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRK 85 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCSC
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCcccc
Confidence 47789999999999999 77799999999999999999999987667889999999999999999998876654322111
Q ss_pred c-cccCCCCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCC
Q psy1705 85 T-LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCA 163 (309)
Q Consensus 85 ~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~ 163 (309)
. .+..+ ...+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+..+++.||+
T Consensus 86 ~~~~~~~---~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~gC~ 162 (316)
T 1cs8_A 86 GKVFQEP---LFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCN 162 (316)
T ss_dssp CEECCCC---TTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGG
T ss_pred CccccCc---cccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCCCC
Confidence 1 22222 2347999999999999999999999999999999999999999999999999999999999755689999
Q ss_pred CCchHHHHHHHHHhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhc
Q psy1705 164 GGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243 (309)
Q Consensus 164 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~ 243 (309)
||++..|++|+.+++||++|++|||.+.++.|+..+....+++++|..|+. ++++||++|+++|||+|+|++..++|++
T Consensus 163 GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~~f~~ 241 (316)
T 1cs8_A 163 GGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLF 241 (316)
T ss_dssp CBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSHHHHT
T ss_pred CCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCCccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCChhhcc
Confidence 999999999997444999999999999999999876666789999999987 9999999999999999999997569999
Q ss_pred cCCceecCCCCCCCCCCeEEEEEEeC---C-----CEEEEEcCCCCCCCCCceEEEEecC-CcccccceeeEeeC
Q psy1705 244 YASGIYDDEACTSDYVNHAMLLVGYT---R-----NSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309 (309)
Q Consensus 244 y~~Gi~~~~~~~~~~~~Hav~iVGyg---~-----~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 309 (309)
|++|||..+.|+...++|||+||||| . +|||||||||++||++|||||+|+. |.|||++.++||++
T Consensus 242 Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 242 YKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 316 (316)
T ss_dssp EEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEECC
T ss_pred ccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCCCccCccceeeEeeC
Confidence 99999998889655789999999997 3 6999999999999999999999975 89999999999986
No 6
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=3e-88 Score=617.10 Aligned_cols=302 Identities=39% Similarity=0.733 Sum_probs=268.3
Q ss_pred hHHHHHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccCcc
Q psy1705 3 NKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRI 82 (309)
Q Consensus 3 ~~~~~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~ 82 (309)
+.++...|++||++|+|+|.+.+|+.+|+.||++|+++|++||+++..|..+|++|+|+|+|||.+||++++++...+..
T Consensus 4 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 83 (314)
T 1by8_A 4 EEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLS 83 (314)
T ss_dssp -CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSC
T ss_pred cHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcc
Confidence 34688899999999999999888999999999999999999999876677899999999999999999988766543221
Q ss_pred c-cc--cccCCCCCCCCC-CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCC
Q psy1705 83 R-RT--LVRSPESNESVL-IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158 (309)
Q Consensus 83 ~-~~--~~~~~~~~~~~~-lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~ 158 (309)
. +. .+..+ ...+ ||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+. +
T Consensus 84 ~~~~~~~~~~~---~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~--~ 158 (314)
T 1by8_A 84 HSRSNDTLYIP---EWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--E 158 (314)
T ss_dssp CCCSSSSSBCC---CCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT--T
T ss_pred cccCCcccccc---ccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--C
Confidence 1 11 12111 1224 9999999999999999999999999999999999999999999999999999999986 5
Q ss_pred CCCCCCCchHHHHHHHHHhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCC
Q psy1705 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASP 238 (309)
Q Consensus 159 ~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~ 238 (309)
+.||+||++..|++|+++++||++|++|||.+.++.|+..+.....++++|..|+..++++||++|+++|||+|+|+++.
T Consensus 159 ~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~ 238 (314)
T 1by8_A 159 NDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASL 238 (314)
T ss_dssp SCGGGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCGGGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCS
T ss_pred CCCCcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCCccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeCh
Confidence 89999999999999999545999999999999999998766556688999999987799999999999999999999976
Q ss_pred hhhhccCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEec-CCcccccceeeEeeC
Q psy1705 239 HTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309 (309)
Q Consensus 239 ~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~-~~~Cgi~~~~~~p~~ 309 (309)
++|++|++|||..+.|+...++|||+|||| |++|||||||||++||++|||||+|+ .|.|||++.++||++
T Consensus 239 ~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 239 TSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 314 (314)
T ss_dssp HHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBTTTSTBTTEEEECCSSSCGGGTTSSCEEECC
T ss_pred HHhhhccCceecCCCCCCCCCCeEEEEEEEeccCCceEEEEEcCCCCCcCcCCEEEEEcCCCCcCCccCeeEEeeC
Confidence 799999999999988965578999999999 57899999999999999999999997 599999999999986
No 7
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=3.5e-87 Score=609.09 Aligned_cols=295 Identities=32% Similarity=0.630 Sum_probs=262.5
Q ss_pred HHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcc-cccCccc--c
Q psy1705 8 IIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTR-LTHSRIR--R 84 (309)
Q Consensus 8 ~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~-~~~~~~~--~ 84 (309)
..|++||++|+|+|.+.+|+.+| .||++|+++|++||+++..++.+|++|+|+|+|||.+||++++++ ...+... .
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~ 81 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSH 81 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSCS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccccc
Confidence 47999999999999887888999 999999999999999876678899999999999999999987765 4322111 1
Q ss_pred c-cccCCCCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCC
Q psy1705 85 T-LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCA 163 (309)
Q Consensus 85 ~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~ 163 (309)
. .+..+ ..+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+..+++.||+
T Consensus 82 ~~~~~~~----~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~ 157 (310)
T 2o6x_A 82 GVPYEAN----NRAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCG 157 (310)
T ss_dssp SEECCC--------CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGG
T ss_pred CCccccc----cCCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCC
Confidence 1 22211 126999999999999999999999999999999999999999999999999999999999755689999
Q ss_pred CCchHHHHHHHHHhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhc
Q psy1705 164 GGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQL 243 (309)
Q Consensus 164 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~ 243 (309)
||++..|++|+++. ||++|++|||.+.++.|+........++++|..|+..++++||++|+++|||+|+|++. ++|++
T Consensus 158 GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f~~ 235 (310)
T 2o6x_A 158 GGLMENAYQYLKQF-GLETESSYPYTAVEGQCRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDFMM 235 (310)
T ss_dssp CCCHHHHHHHHTTS-CBCBTTTSCCCSSCCCCCCCGGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHHHT
T ss_pred CCCHHHHHHHHHHC-CcCchhcCCCCCCCCCccCCCCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhhhh
Confidence 99999999999965 99999999999999999977655678999999998779999999999999999999998 79999
Q ss_pred cCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecC-CcccccceeeEeeC
Q psy1705 244 YASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309 (309)
Q Consensus 244 y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 309 (309)
|++|||..+.|+...++|||+|||| |++|||||||||++||++|||||+|+. |+|||++.++||++
T Consensus 236 Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 236 YRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLPMV 306 (310)
T ss_dssp EEEEEECCSSCCTTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSEEEEEE
T ss_pred CCCceecCCCCCCCCCCEEEEEEEEeccCCceEEEEEeCCCCccCCCcEEEEEcCCCCcCCccceeeEEEe
Confidence 9999999888965678999999999 578999999999999999999999975 89999999999984
No 8
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=1.7e-85 Score=600.61 Aligned_cols=295 Identities=29% Similarity=0.520 Sum_probs=262.2
Q ss_pred ChHHHHHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccCc
Q psy1705 2 TNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSR 81 (309)
Q Consensus 2 ~~~~~~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~ 81 (309)
+|+++..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++++++...+.
T Consensus 14 ~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~----~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~ 89 (322)
T 1pci_A 14 STERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK----NNSYWLGLNEFADLSNDEFNEKYVGSLIDA 89 (322)
T ss_dssp HHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEECSCTTTTSCHHHHHHHHCCCBCCC
T ss_pred chHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc----CCceEEecCccccCCHHHHHHHhcCCCCcc
Confidence 4678889999999999999998889999999999999999999985 468999999999999999999886654322
Q ss_pred cc--cc--cccCCCCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCC
Q psy1705 82 IR--RT--LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157 (309)
Q Consensus 82 ~~--~~--~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~ 157 (309)
.. .. .+... ...+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+.
T Consensus 90 ~~~~~~~~~~~~~---~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~-- 164 (322)
T 1pci_A 90 TIEQSYDEEFINE---DIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-- 164 (322)
T ss_dssp SSCCCCSEECCCC---CCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT--
T ss_pred ccccccccccccc---cccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC--
Confidence 11 10 11111 23479999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCchHHHHHHHHHhCCCCCCCCCcCCCCCCccCCCC-CCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEe
Q psy1705 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKR-PNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINA 236 (309)
Q Consensus 158 ~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~ 236 (309)
++.||+||++..|++|++++ ||++|++|||.+.++.|+... ....++|.+|..|+..++++|+++|++ |||+|+|++
T Consensus 165 ~~~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~-GPV~v~i~~ 242 (322)
T 1pci_A 165 RSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVES 242 (322)
T ss_dssp TSCGGGCBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHH-SCEEEEECT
T ss_pred CCCCCCCCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHH-CCEEEEEec
Confidence 58899999999999999999 999999999999999998764 335678999999987789999999997 999999999
Q ss_pred CChhhhccCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecC----CcccccceeeEee
Q psy1705 237 SPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN----NRCGIANYAVYAL 308 (309)
Q Consensus 237 ~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~ 308 (309)
+.++|++|++|||.+ .|+ ..++|||+|||| |++|||||||||++|||+|||||+|+. |.|||++.++||+
T Consensus 243 ~~~~f~~Y~~Gvy~~-~c~-~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~ 320 (322)
T 1pci_A 243 KGRPFQLYKGGIFEG-PCG-TKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPT 320 (322)
T ss_dssp TCHHHHTEEEEEECC-SCC-SCCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEEC
T ss_pred ccccccccCCeEeCC-CCC-CCCCEEEEEEEEeccCCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEE
Confidence 657999999999986 484 457999999999 568999999999999999999999975 9999999999998
Q ss_pred C
Q psy1705 309 I 309 (309)
Q Consensus 309 ~ 309 (309)
+
T Consensus 321 ~ 321 (322)
T 1pci_A 321 K 321 (322)
T ss_dssp C
T ss_pred e
Confidence 5
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=7.7e-82 Score=573.24 Aligned_cols=285 Identities=24% Similarity=0.438 Sum_probs=248.6
Q ss_pred HHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccCccc--cc
Q psy1705 8 IIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIR--RT 85 (309)
Q Consensus 8 ~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~--~~ 85 (309)
..|++||++|+|.|.+.+|+.+|+.||++|+++|++ |+ + |+|+|+|||.+||++++++...+... ..
T Consensus 6 ~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~----~------g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~~ 74 (312)
T 1xkg_A 6 KTFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG----G------AINHLSDLSLDEFKNRFLMSAEAFEHLKTQ 74 (312)
T ss_dssp CSHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC----C------CCCTTTTSCHHHHHHHHSBCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc----C------CCCcccCCCHHHHHHHhcCCCCccccccCC
Confidence 469999999999999888999999999999999999 73 2 99999999999999965543211110 01
Q ss_pred -cccCCC--CCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCC
Q psy1705 86 -LVRSPE--SNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGC 162 (309)
Q Consensus 86 -~~~~~~--~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc 162 (309)
.+.... .....+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+. ..||
T Consensus 75 ~~~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~---~~GC 151 (312)
T 1xkg_A 75 FDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS---QHGC 151 (312)
T ss_dssp HC-----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTT
T ss_pred cccccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC---CCCC
Confidence 111110 0012379999999999999999999999999999999999999999999999999999999982 2899
Q ss_pred CCCchHHHHHHHHHhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhc-CCCEEEEEEeCCh-h
Q psy1705 163 AGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLAT-VGPIAVSINASPH-T 240 (309)
Q Consensus 163 ~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~-~gPV~v~~~~~~~-~ 240 (309)
+||++..|++|+++. ||++|++|||.+..+.|+ ......+++++|..|+..++++||++|++ +|||+|+|+++.. +
T Consensus 152 ~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~-~~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~ 229 (312)
T 1xkg_A 152 HGDTIPRGIEYIQHN-GVVQESYYRYVAREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDA 229 (312)
T ss_dssp BCCCHHHHHHHHHHH-CEEBGGGSCCCSSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHH
T ss_pred CCCCHHHHHHHHHHc-CCCccccCCccCCCCCCC-CCCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccccc
Confidence 999999999999997 999999999999999999 55556789999999987799999999999 9999999999833 8
Q ss_pred hhccCCceecCCCCC-CCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecCCcccccceeeEeeC
Q psy1705 241 FQLYASGIYDDEACT-SDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309 (309)
Q Consensus 241 f~~y~~Gi~~~~~~~-~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~~ 309 (309)
|++|++|||..+.|+ ... +|||+|||| |++|||||||||++||++|||||+|+.|.|||++.++||++
T Consensus 230 f~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~n~CgI~~~~~~~~~ 302 (312)
T 1xkg_A 230 FRHYDGRTIIQRDNGYQPN-YHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 302 (312)
T ss_dssp HHTCCSSSCBCCCCSSCCE-EEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTCCEEEEC
T ss_pred ccccCCcEEcCCCCCCCcC-ceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCcccccceeEEeec
Confidence 999999999998896 446 999999999 57899999999999999999999998899999999999985
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.3e-74 Score=546.02 Aligned_cols=275 Identities=30% Similarity=0.536 Sum_probs=186.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEee-cccCCCCCHHHHHHHhcccccCccc--cccccCCCCCCCCCCCCc
Q psy1705 25 ATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLR-ENHLSDLHPRHYIKEMTRLTHSRIR--RTLVRSPESNESVLIPDH 101 (309)
Q Consensus 25 ~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g-~N~fsd~t~~E~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lP~~ 101 (309)
.|+.+|+.||++|+++|++||++ ..+|+++ +|+|+|||.+||++++++...+... .............+||++
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~----~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s 210 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAI----QKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILFLPTS 210 (441)
T ss_dssp ---------------------------------------------------------------------------CCCSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHcc----CCceEeecccccccCCHHHHHHHhCCCcccccccccCccccccccccccCCCC
Confidence 46789999999999999999986 4689998 7999999999999988764322111 001110000024589999
Q ss_pred eecccCC---CCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCC--cCCHHHHHhhcCCCCCCCCCCCchHHH-HHHHH
Q psy1705 102 LDWREKG---FITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIE--ELSIQQVVDCSIISGNLGCAGGSLRNT-LNYVQ 175 (309)
Q Consensus 102 ~Dwr~~g---~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~--~lS~q~l~dc~~~~~~~gc~GG~~~~a-~~~~~ 175 (309)
||||+++ +|+||||||.||||||||++++||++++|+++..+ .||+|+|+||+. .+.||+||++..+ ++|++
T Consensus 211 ~DwR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~--~~~GC~GG~~~~aa~~yi~ 288 (441)
T 3pdf_A 211 WDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ--YAQGCEGGFPYLIAGKYAQ 288 (441)
T ss_dssp EETTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHTTHHHH
T ss_pred EECCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc--CCCCCCCCchhHHHHHHHH
Confidence 9999964 89999999999999999999999999999998754 599999999986 3889999999987 89999
Q ss_pred HhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcC----CCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecC
Q psy1705 176 FAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLP----PQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251 (309)
Q Consensus 176 ~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~----~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~ 251 (309)
+. ||++|++|||.+.++.|..........+.+|..++ ..++++||++|+++|||+|+|++. ++|++|++|||..
T Consensus 289 ~~-Gi~tE~~yPY~~~~~~C~~~~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~~ 366 (441)
T 3pdf_A 289 DF-GLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYHH 366 (441)
T ss_dssp HT-CBCBGGGSCCCSSCCCSCCCSSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEECC
T ss_pred hc-CCCcHHHeeecccCCCCCCccccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEec
Confidence 98 99999999999999999987666667888898886 358999999999999999999997 8999999999998
Q ss_pred CCCCC-----CCCCeEEEEEEe------CCCEEEEEcCCCCCCCCCceEEEEecCCcccccceeeEe
Q psy1705 252 EACTS-----DYVNHAMLLVGY------TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYA 307 (309)
Q Consensus 252 ~~~~~-----~~~~Hav~iVGy------g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p 307 (309)
+.|.. ..++|||+|||| |++|||||||||++|||+|||||+|+.|+|||++.++++
T Consensus 367 ~~~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s~~~a~ 433 (441)
T 3pdf_A 367 TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAA 433 (441)
T ss_dssp C---CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCCEEE
T ss_pred CCCCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCCceEEe
Confidence 76532 358999999999 458999999999999999999999998999999998754
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=6.9e-73 Score=517.50 Aligned_cols=269 Identities=21% Similarity=0.334 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCceEeecc-cCCCCCHHHHHHHhcccccCcc--c-cc-cccCCCCCCCCCCCCce
Q psy1705 28 SKKKLHWQSNHKKIHTHNQEAQQGLHGYTLREN-HLSDLHPRHYIKEMTRLTHSRI--R-RT-LVRSPESNESVLIPDHL 102 (309)
Q Consensus 28 ~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N-~fsd~t~~E~~~~~~~~~~~~~--~-~~-~~~~~~~~~~~~lP~~~ 102 (309)
+.|+..+..+.++|++||++ .+.+|++++| +|+|||.+||+++++....+.. . .. .+... ....+||++|
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~---~~~~~~~~~n~~f~dlt~eE~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~lP~s~ 76 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRL---NRGIWKAKYDGVMQNITLREAKRLNGVIKKNNNASILPKRRFTEE--EARAPLPSSF 76 (325)
T ss_dssp ---------------------------------------------------------CCSCBCCCCHH--HHHCCCCSCE
T ss_pred CcccccccccHHHHHHHHhC---CCCceEEecccccccCCHHHHHHHhCCCCCCcccccccCcccccc--ccccCCCCcE
Confidence 46788889999999999986 3478999999 8999999999998754332211 0 00 11100 0125899999
Q ss_pred ecccC----CCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCC-CCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 103 DWREK----GFITPDWNQEDCGACYAFSIASAIQGQIFKSTSE-IEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 103 Dwr~~----g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~-~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
|||++ |.|+||||||.||||||||++++||++++|+++. .+.||+|+|+||+.. .+.||+||++..|++|++++
T Consensus 77 DwR~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~-~~~GC~GG~~~~A~~yi~~~ 155 (325)
T 3hhi_A 77 DSAEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSD-CGDGCNGGDPDRAWAYFSST 155 (325)
T ss_dssp EHHHHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGG-GBCTTBCBCHHHHHHHHHHT
T ss_pred ehhHhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccC-CCCCCCCCCHHHHHHHHHHh
Confidence 99998 8999999999999999999999999999999987 899999999999874 46899999999999999999
Q ss_pred CCCCCCCCCcCC-CC----------CCccCCC-------------C---CCceEEeceeEEcCCCCHHHHHHHHhcCCCE
Q psy1705 178 GGLMKEEDYPYK-GK----------QSICKFK-------------R---PNIVVDISSWSVLPPQDEHALKVTLATVGPI 230 (309)
Q Consensus 178 ~Gi~~e~~yPY~-~~----------~~~c~~~-------------~---~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV 230 (309)
||++|++|||. +. .+.|... . ......+..|. + .++++||++|+++|||
T Consensus 156 -Gi~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV 231 (325)
T 3hhi_A 156 -GLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPF 231 (325)
T ss_dssp -CBCBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCE
T ss_pred -CCCcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCE
Confidence 99999999998 32 2566510 0 01223456776 5 4899999999999999
Q ss_pred EEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecCCcccccceeeE
Q psy1705 231 AVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVY 306 (309)
Q Consensus 231 ~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~ 306 (309)
+|+|+++ ++|++|++|||..+.+ ...++|||+|||| |++|||||||||++|||+|||||+|+.|+|||++.+++
T Consensus 232 ~v~i~~~-~~f~~Y~~GVy~~~~~-~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI~~~~~~ 309 (325)
T 3hhi_A 232 EVAFDVY-EDFIAYNSGVYHHVSG-QYLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSA 309 (325)
T ss_dssp EEEEEEE-HHHHTCCSSEECCCSC-CEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCEEE
T ss_pred EEEEEec-cccccccCceecCCCC-CCCCCEEEEEEEEEecCCceEEEEEeCCCCCcccCCEEEEEcCCCeecCccceEE
Confidence 9999997 8999999999987644 4457999999999 67899999999999999999999999899999999987
Q ss_pred ee
Q psy1705 307 AL 308 (309)
Q Consensus 307 p~ 308 (309)
++
T Consensus 310 g~ 311 (325)
T 3hhi_A 310 GI 311 (325)
T ss_dssp EE
T ss_pred ee
Confidence 65
No 12
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=2.1e-69 Score=493.52 Aligned_cols=260 Identities=23% Similarity=0.395 Sum_probs=210.8
Q ss_pred HHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccccCccccccccCCCCCCCCCCCCceecccC----CCCCc
Q psy1705 37 NHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREK----GFITP 112 (309)
Q Consensus 37 n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~p 112 (309)
+.++|++||++ +.+|++++| |+|+|.||++.+++....+...+..+... ...+||++||||++ +.|+|
T Consensus 11 ~~~~i~~~N~~----~~~~~~~~n-f~~~~~e~~~~~lg~~~~~~~~~~~~~~~---~~~~lP~s~DwR~~~~~c~~vtp 82 (317)
T 3pbh_A 11 SDELVNYVNKR----NTTWQAGHN-FYNVDMSYLKRLCGTFLGGPKPPQRVMFT---EDLKLPASFDAREQWPQCPTIKE 82 (317)
T ss_dssp CHHHHHHHHHH----TCSEEECCC-CSSCCHHHHHHTCCBCTTCCCCSEEECCC---SCCCCCSSEEHHHHCTTCGGGTC
T ss_pred cHHHHHHHHCC----CCCeEEeec-cccCCHHHHHHHcCCCCCccccCcccccc---cccCCCCCEechhccCCCCCcCC
Confidence 46789999976 579999999 99999988887765432221111111111 23589999999997 58999
Q ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHcCC--CCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCCC----
Q psy1705 113 DWNQEDCGACYAFSIASAIQGQIFKSTSE--IEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDY---- 186 (309)
Q Consensus 113 V~dQg~cgsCwAfa~~~~~e~~~~~~~~~--~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y---- 186 (309)
|||||.||||||||++++||++++|+++. .+.||+|+|+||+....+.||+||++..|++|++++ ||++|.+|
T Consensus 83 VkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~~ 161 (317)
T 3pbh_A 83 IRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESHV 161 (317)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCCC
T ss_pred ccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCCC
Confidence 99999999999999999999999999874 899999999999863357899999999999999999 99999988
Q ss_pred ---cCCC---------CCCccCCCC--------CCce---------EEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeC
Q psy1705 187 ---PYKG---------KQSICKFKR--------PNIV---------VDISSWSVLPPQDEHALKVTLATVGPIAVSINAS 237 (309)
Q Consensus 187 ---PY~~---------~~~~c~~~~--------~~~~---------~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~ 237 (309)
||.. ..+.|.... .... ........++ .++++||++|+++|||+|+|++.
T Consensus 162 ~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~~~ 240 (317)
T 3pbh_A 162 GCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFSVY 240 (317)
T ss_dssp BSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEEEE
T ss_pred CCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEEec
Confidence 9984 345564210 0000 1112223555 48999999999999999999997
Q ss_pred ChhhhccCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecCCcccccceeeEee
Q psy1705 238 PHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308 (309)
Q Consensus 238 ~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~ 308 (309)
++|++|++|||..+ |....++|||+|||| |++|||||||||++|||+|||||+|+.|+|||++.++.++
T Consensus 241 -~~f~~Y~~GVy~~~-~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~~~~a~~ 313 (317)
T 3pbh_A 241 -SDFLLYKSGVYQHV-TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGI 313 (317)
T ss_dssp -GGGGGEEEEEECCC-SCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEECC
T ss_pred -ccccCCCCcEEccC-CCCCCCCEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCCceEeee
Confidence 89999999999986 534567999999999 7889999999999999999999999999999999988654
No 13
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=7.6e-69 Score=465.83 Aligned_cols=210 Identities=43% Similarity=0.867 Sum_probs=198.3
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~~~~~ 78 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKN 78 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999996 58899999999999999887
Q ss_pred CCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCC
Q psy1705 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSD 257 (309)
Q Consensus 178 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 257 (309)
+|+++|++|||.+.++.|+..+.....++++|..++..++++||++|+++|||+|+|++..++|++|++|||..+.|+..
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~ 158 (215)
T 3kwz_A 79 RGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD 158 (215)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTT
T ss_pred CCccccccCCCccCCCccccCCCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCC
Confidence 79999999999999999998777777899999999877899999999999999999999767999999999999889666
Q ss_pred CCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecC-CcccccceeeEeeC
Q psy1705 258 YVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309 (309)
Q Consensus 258 ~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 309 (309)
.++|||+|||| |++|||||||||++|||+|||||+|+. |+|||+++++||+|
T Consensus 159 ~~~HaV~iVGyg~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 159 NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215 (215)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEEECC
T ss_pred hhhCEEEEEEEeccCCceEEEEECCcCcccccCCEEEEecCCCCccCcCCceeeeeC
Confidence 89999999999 678999999999999999999999975 99999999999986
No 14
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=1.8e-68 Score=464.81 Aligned_cols=210 Identities=42% Similarity=0.848 Sum_probs=195.8
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHH-H
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQ-F 176 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~-~ 176 (309)
||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+..+++.||+||++..|++|+. +
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999999999999999999765689999999999999997 5
Q ss_pred hCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCC
Q psy1705 177 AGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256 (309)
Q Consensus 177 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~ 256 (309)
. |+++|++|||.+..+.|+..+....+++++|..++. ++++||++|+++|||+|+|++..++|++|++|||..+.|..
T Consensus 81 ~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~ 158 (220)
T 2xu3_A 81 G-GLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS 158 (220)
T ss_dssp T-CEEBTTTSCCCSSCCCCCCCGGGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCS
T ss_pred C-CcccccccCCcccCcCccCCCCCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCC
Confidence 5 999999999999999998776566789999999987 89999999999999999999975689999999999888965
Q ss_pred CCCCeEEEEEEeC--------CCEEEEEcCCCCCCCCCceEEEEecC-CcccccceeeEeeC
Q psy1705 257 DYVNHAMLLVGYT--------RNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309 (309)
Q Consensus 257 ~~~~Hav~iVGyg--------~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 309 (309)
..++|||+||||| ++|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 159 ~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 159 EDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220 (220)
T ss_dssp SCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred CCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCCCcCCccccceeeeC
Confidence 6789999999995 58999999999999999999999975 89999999999986
No 15
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=1.2e-68 Score=465.50 Aligned_cols=211 Identities=38% Similarity=0.789 Sum_probs=198.2
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhc-CCCCCCCCCCCchHHHHHHHHH
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCS-IISGNLGCAGGSLRNTLNYVQF 176 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~-~~~~~~gc~GG~~~~a~~~~~~ 176 (309)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+ ..+++.||+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 5456899999999999999976
Q ss_pred hCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCC
Q psy1705 177 AGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256 (309)
Q Consensus 177 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~ 256 (309)
+.|+++|++|||.+..+.|+........++.+|..++..++++||++|+++|||+++|++..++|++|++|||..+.| .
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~-~ 160 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC-T 160 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTC-C
T ss_pred hCCcCcccccCccCCCCcccCCCccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCC-C
Confidence 449999999999999999998777778899999999877999999999999999999999767999999999999889 6
Q ss_pred CCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecC-CcccccceeeEeeC
Q psy1705 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN-NRCGIANYAVYALI 309 (309)
Q Consensus 257 ~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~-~~Cgi~~~~~~p~~ 309 (309)
..++|||+|||| |++|||||||||++|||+|||||+|+. |+|||+++++||+|
T Consensus 161 ~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 161 QNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 218 (218)
T ss_dssp SCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred cccCcEEEEEEEeccCCceEEEEECCCCCccccCCEEEEecCCCCcccccCceeeeeC
Confidence 789999999999 678999999999999999999999976 99999999999986
No 16
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=3.1e-68 Score=463.61 Aligned_cols=210 Identities=37% Similarity=0.795 Sum_probs=198.0
Q ss_pred CCCceecccCC-CCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHH
Q psy1705 98 IPDHLDWREKG-FITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQF 176 (309)
Q Consensus 98 lP~~~Dwr~~g-~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 176 (309)
||++||||++| +|+||||||.||||||||++++||+++++++++.+.||+|+|+||+..+++.||+||++..|++|+++
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999999 89999999999999999999999999999999999999999999997656899999999999999998
Q ss_pred hCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCC
Q psy1705 177 AGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256 (309)
Q Consensus 177 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~ 256 (309)
++|+++|++|||.+..+.|+..+.....++.+|..++..++++||++|+++|||+++|++. ++|++|++|||..+.|..
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~~ 159 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCHK 159 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCGGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCCC
T ss_pred cCCcCcccccCccCCCCCCCCCCCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCCC
Confidence 7799999999999999999987777778999999998779999999999999999999998 799999999999988854
Q ss_pred C--CCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecCCcccccceeeEee
Q psy1705 257 D--YVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308 (309)
Q Consensus 257 ~--~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~ 308 (309)
. .++|||+|||| |++|||||||||++|||+|||||+|+.|+|||+++++||+
T Consensus 160 ~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~~~ 217 (220)
T 8pch_A 160 TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 217 (220)
T ss_dssp STTTCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEE
T ss_pred CCCcCCcEEEEEEEEccCCeeEEEEECCCCcCcccCCEEEEEcCCCccccCCCceeEe
Confidence 3 68999999999 6789999999999999999999999999999999999997
No 17
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=2.3e-67 Score=455.19 Aligned_cols=206 Identities=36% Similarity=0.718 Sum_probs=191.4
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~ 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR--RSYGCNGGYPWSALQLVAQY 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHT
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999985 47899999999999999998
Q ss_pred CCCCCCCCCcCCCCCCccCCCC-CCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCC
Q psy1705 178 GGLMKEEDYPYKGKQSICKFKR-PNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256 (309)
Q Consensus 178 ~Gi~~e~~yPY~~~~~~c~~~~-~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~ 256 (309)
||++|++|||.+..+.|+... ....+++++|..++..++++||++|++ |||+|+|++..++|++|++|||.. .|.
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~-~~~- 154 (212)
T 2cio_A 79 -GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIAN-QPVSVVLEAAGKDFQLYRGGIFVG-PCG- 154 (212)
T ss_dssp -CBCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCC-
T ss_pred -CcCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHh-CCEEEEEeccCcchhhcCCceecC-CCC-
Confidence 999999999999999998765 355688999999987789999999996 999999999745899999999987 474
Q ss_pred CCCCeEEEEEEeCCCEEEEEcCCCCCCCCCceEEEEecC----CcccccceeeEeeC
Q psy1705 257 DYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGN----NRCGIANYAVYALI 309 (309)
Q Consensus 257 ~~~~Hav~iVGyg~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 309 (309)
..++|||+|||||.+|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 155 ~~~~HaV~iVGyg~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 155 NKVDHAVAAVGYGPNYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp SCCCEEEEEEEEETTEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred CCCCEEEEEEEecCCeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 467999999999889999999999999999999999975 89999999999985
No 18
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=4.5e-67 Score=451.89 Aligned_cols=205 Identities=39% Similarity=0.757 Sum_probs=190.3
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK--KNHGCLGGAFVFAYQYIINN 78 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999985 47899999999999999987
Q ss_pred CCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCC
Q psy1705 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSD 257 (309)
Q Consensus 178 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 257 (309)
+|+++|++|||.+.++.|+. ....+++.+|..++..++++||++|++ |||+|+|++..++|++|++|||.. .|. .
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~--~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~-~c~-~ 153 (208)
T 1o0e_A 79 GGIDTQANYPYKAVQGPCQA--ASKVVSIDGYNGVPFCNEXALKQAVAV-QPSTVAIDASSAQFQQYSSGIFSG-PCG-T 153 (208)
T ss_dssp TCBCBTTTSCCCSSCCCCCC--CCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCC-S
T ss_pred CCcCcccccCccCCCCcCCC--CCceEEeCeEEEeCCCCHHHHHHHHHh-CCEEEEEEccCcccccccCceECC-CCC-C
Confidence 69999999999999999986 345678999999987789999999997 999999999745899999999987 474 4
Q ss_pred CCCeEEEEEEeCCCEEEEEcCCCCCCCCCceEEEEecC--CcccccceeeEeeC
Q psy1705 258 YVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGN--NRCGIANYAVYALI 309 (309)
Q Consensus 258 ~~~Hav~iVGyg~~ywivkNSWG~~WG~~Gy~~i~~~~--~~Cgi~~~~~~p~~ 309 (309)
.++|||+|||||.+|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 154 ~~~HaV~iVGyg~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 154 KLNHGVTIVGYQANYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYPTK 207 (208)
T ss_dssp CCCEEEEEEEECSSEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEEEEC
T ss_pred cCCEEEEEEEeCCCeEEEEcCCCCcccCCcEEEEEcCCCCCcCCCcccceeeec
Confidence 67999999999999999999999999999999999975 99999999999985
No 19
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=5.9e-67 Score=453.06 Aligned_cols=206 Identities=36% Similarity=0.734 Sum_probs=192.0
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER--RSHGCDGGYQTTSLQYVVDN 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999986 47899999999999999999
Q ss_pred CCCCCCCCCcCCCCCCccCCCCC-CceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCC
Q psy1705 178 GGLMKEEDYPYKGKQSICKFKRP-NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256 (309)
Q Consensus 178 ~Gi~~e~~yPY~~~~~~c~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~ 256 (309)
|+++|++|||.+..+.|+.... ...+++++|..++..++++||++|++ |||+|+|++..++|++|++|||.. .|.
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-gPV~v~i~~~~~~f~~Y~~Giy~~-~~~- 154 (214)
T 2bdz_A 79 -GVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIAN-QPVSVVTDSRGRGFQFYKGGIYEG-PCG- 154 (214)
T ss_dssp -CEEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-SCC-
T ss_pred -CCCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHh-CCEEEEEeeChhHhhcccCceecC-CCC-
Confidence 9999999999999899987654 45788999999987789999999997 999999999757999999999987 474
Q ss_pred CCCCeEEEEEEeCCCEEEEEcCCCCCCCCCceEEEEecC----CcccccceeeEeeC
Q psy1705 257 DYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGN----NRCGIANYAVYALI 309 (309)
Q Consensus 257 ~~~~Hav~iVGyg~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 309 (309)
..++|||+|||||.+|||||||||++|||+|||||+|+. |+|||++.++||++
T Consensus 155 ~~~~HaV~iVGyg~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 155 TNTDHAVTAVGYGKTYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp SCCCEEEEEEEECSSEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred CCCCeEEEEEEcCCCeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 468999999999989999999999999999999999975 89999999999985
No 20
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=3.7e-67 Score=454.30 Aligned_cols=206 Identities=34% Similarity=0.704 Sum_probs=190.4
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~ 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER--RSYGCRGGFPLYALQYVANS 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHc
Confidence 7999999999999999999999999999999999999999999999999999999996 48899999999999999999
Q ss_pred CCCCCCCCCcCCCCCCccCCC-CCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCC
Q psy1705 178 GGLMKEEDYPYKGKQSICKFK-RPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256 (309)
Q Consensus 178 ~Gi~~e~~yPY~~~~~~c~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~ 256 (309)
||++|++|||.+..+.|+.. .....+++.+|..++..+++.|+++|. +|||+|+|+++.++|++|++|||.. .| .
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~-~GPV~v~i~~~~~~f~~y~~Giy~~-~~-~ 154 (213)
T 3ioq_A 79 -GIHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIA-IQPVSIVVEAKGRAFQNYRGGIFAG-PC-G 154 (213)
T ss_dssp -CEEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHT-TSCEEEEECCCSHHHHTCCSSEECC-SC-C
T ss_pred -CCCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHH-hCCEEEEEEechhhhhhccCCeEcC-CC-C
Confidence 99999999999999999864 345678899999998767777777776 5999999999768999999999998 46 4
Q ss_pred CCCCeEEEEEEeCCCEEEEEcCCCCCCCCCceEEEEecC----CcccccceeeEeeC
Q psy1705 257 DYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMYLKRGN----NRCGIANYAVYALI 309 (309)
Q Consensus 257 ~~~~Hav~iVGyg~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 309 (309)
..++|||+|||||++|||||||||++|||+|||||+|+. |+|||++.++||++
T Consensus 155 ~~~~HaV~iVGyg~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 155 TSIDHAVAAVGYGNDYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp SCCCEEEEEEEEETTEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred CccCceEEEEecCCCeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 678999999999999999999999999999999999975 89999999999985
No 21
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=2.5e-67 Score=455.68 Aligned_cols=207 Identities=38% Similarity=0.731 Sum_probs=191.2
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+.. +.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~i~~~ 78 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM--DKACMGGLPSNAYSAIKNL 78 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSS--SCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCC--CCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999863 7899999999999999987
Q ss_pred CCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCC--CCC
Q psy1705 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE--ACT 255 (309)
Q Consensus 178 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~--~~~ 255 (309)
+||++|++|||.+..+.|+........++.++..++. ++++||++|+++|||+|+|++. +|++|++|||..+ .|+
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~i~~-~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c~ 155 (214)
T 1m6d_A 79 GGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQ-NEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLCS 155 (214)
T ss_dssp TCBCBTTTSCCCSSCCCCCCCGGGCCBCCSEEEECCS-CHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGSC
T ss_pred cCcccccCcCcCCCCCcCCCCcccceEEecCEEEeCh-HHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcCC
Confidence 6899999999999999998766555678899999975 8999999999999999999986 6999999999864 476
Q ss_pred CCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecCCcccccceeeEeeC
Q psy1705 256 SDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309 (309)
Q Consensus 256 ~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~~ 309 (309)
...++|||+|||| |++|||||||||++|||+|||||+|+.|.|||++.++||++
T Consensus 156 ~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 156 PWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213 (214)
T ss_dssp TTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEEC
T ss_pred CCcCCEEEEEEEEeecCCcEEEEEEeCCCCCcccCcEEEEEcCCCccccCceeEEEEe
Confidence 5678999999999 56899999999999999999999998899999999999986
No 22
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=3.6e-67 Score=457.41 Aligned_cols=210 Identities=27% Similarity=0.513 Sum_probs=196.1
Q ss_pred CCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHH
Q psy1705 95 SVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174 (309)
Q Consensus 95 ~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~ 174 (309)
..+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. +.||+||++..|++|+
T Consensus 7 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~ 83 (222)
T 3f5v_A 7 NGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS---QHGCHGDTIPRGIEYI 83 (222)
T ss_dssp CCCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHHHHHH
T ss_pred ccCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC---CCCCCCCCHHHHHHHH
Confidence 3589999999999999999999999999999999999999999999999999999999986 7899999999999999
Q ss_pred HHhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhc-CCCEEEEEEeC-ChhhhccCCceecCC
Q psy1705 175 QFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLAT-VGPIAVSINAS-PHTFQLYASGIYDDE 252 (309)
Q Consensus 175 ~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~-~gPV~v~~~~~-~~~f~~y~~Gi~~~~ 252 (309)
+++ |+++|++|||.+..+.|+ .+....+++.+|..+++.++++||++|++ +|||+|+|++. .++|++|++||+..+
T Consensus 84 ~~~-Gi~~e~~yPY~~~~~~C~-~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~ 161 (222)
T 3f5v_A 84 QHN-GVVQESYYRYVAREQSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQR 161 (222)
T ss_dssp HHH-CEEBGGGSCCCSSCCCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCC
T ss_pred HHc-CCCchhhCCCcccCCCcc-CCcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecC
Confidence 998 999999999999999999 55667789999999987799999999999 89999999984 278999999998776
Q ss_pred CCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecCCcccccceeeEeeC
Q psy1705 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309 (309)
Q Consensus 253 ~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~~ 309 (309)
.|....++|||+|||| |++|||||||||++|||+|||||+|+.|.|||+++++||+|
T Consensus 162 ~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 162 DNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 222 (222)
T ss_dssp CCSSSCEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEC
T ss_pred CCCCCccCcEEEEEEEeccCCCEEEEEEcCCCCCcccCCEEEEEcCCCeecCCCceeEEeC
Confidence 6656789999999999 67899999999999999999999999999999999999986
No 23
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.3e-66 Score=453.11 Aligned_cols=208 Identities=39% Similarity=0.835 Sum_probs=192.4
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHH
Q psy1705 97 LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQF 176 (309)
Q Consensus 97 ~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 176 (309)
+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+.. +.||+||++..|++|+++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~y~~~ 79 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA--NHGCRGGWMNPAFQFIVN 79 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC--CCCCCCCCHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999999999864 789999999999999998
Q ss_pred hCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCC
Q psy1705 177 AGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256 (309)
Q Consensus 177 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~ 256 (309)
++||++|++|||.+..+.|+.......+++.+|..++..++++||++|++ |||+|+|++..++|++|++|||.. .|.
T Consensus 80 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~-~~~- 156 (221)
T 1cqd_A 80 NGGINSEETYPYRGQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGIFTG-SCN- 156 (221)
T ss_dssp HTSBCBTTTSCCCSSCCCCCSSSCCCSBCCSEEEECCSSCHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECC-CCC-
T ss_pred hCCccccccCCccCCCCCcCCCCCCceEEeccEEEeCCchHHHHHHHHHh-CCEEEEEeccCcccccccCccccC-CCC-
Confidence 76999999999999999998776666789999999987789999999986 999999998767999999999987 574
Q ss_pred CCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEec----CCcccccceeeEeeC
Q psy1705 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG----NNRCGIANYAVYALI 309 (309)
Q Consensus 257 ~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~----~~~Cgi~~~~~~p~~ 309 (309)
..++|||+|||| |++|||||||||++|||+|||||+|+ .|+|||+++++||++
T Consensus 157 ~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 157 ISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp CCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CcCCeEEEEEEEcccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 468999999999 57899999999999999999999996 489999999999985
No 24
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=9.1e-67 Score=454.14 Aligned_cols=209 Identities=34% Similarity=0.729 Sum_probs=191.3
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+...++.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999976558899999999999999987
Q ss_pred CCCCCCCCCcCCCCCCccCCCCC-CceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCC
Q psy1705 178 GGLMKEEDYPYKGKQSICKFKRP-NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256 (309)
Q Consensus 178 ~Gi~~e~~yPY~~~~~~c~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~ 256 (309)
+||++|++|||.+.++.|..... ...+++.+|..++..++++|+++|. +|||+|+|++..++|++|++|||.. .|.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~-~GPV~v~~~~~~~~f~~Y~~Giy~~-~~~- 157 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVA-YQPVSVALEAAGYNFQHYSSGIFTG-PCG- 157 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHT-TSCEEEEECCCSHHHHTCCSSEECC-CCC-
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHh-cCCEEEEEecCchhhccccCceECC-CCC-
Confidence 79999999999999999985432 2357899999998779999999995 7999999999767999999999987 574
Q ss_pred CCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecCC---cccccceeeEeeC
Q psy1705 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNN---RCGIANYAVYALI 309 (309)
Q Consensus 257 ~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~~---~Cgi~~~~~~p~~ 309 (309)
...+|||+|||| |++|||||||||++|||+|||||+|+.| +|||++.++||++
T Consensus 158 ~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 158 TAVDHAVTIVGYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVK 217 (220)
T ss_dssp CSCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEEC
T ss_pred CccceEEEEEEEecCCCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEEE
Confidence 457999999999 6789999999999999999999999766 9999999999985
No 25
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=1.6e-66 Score=451.04 Aligned_cols=206 Identities=35% Similarity=0.721 Sum_probs=190.3
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~ 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEYVAKN 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999985 47899999999999999999
Q ss_pred CCCCCCCCCcCCCCCCccCCCCC-CceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCC
Q psy1705 178 GGLMKEEDYPYKGKQSICKFKRP-NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256 (309)
Q Consensus 178 ~Gi~~e~~yPY~~~~~~c~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~ 256 (309)
||++|++|||.+..+.|+.... ...+++.+|..++..++++||++|++ |||+|+|+++.++|++|++|||.. .|.
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~~~~~~~~f~~Y~~Giy~~-~~~- 154 (216)
T 1ppo_A 79 -GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEG-PCG- 154 (216)
T ss_dssp -CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHHCCSSEECC-SCC-
T ss_pred -CcCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHh-CCEEEEEecCChhhhhcCCceECC-CCC-
Confidence 9999999999999999986543 45688999999987789999999997 999999999657999999999987 574
Q ss_pred CCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecC----CcccccceeeEeeC
Q psy1705 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN----NRCGIANYAVYALI 309 (309)
Q Consensus 257 ~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 309 (309)
...+|||+|||| |++|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 155 ~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 155 TKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp SCCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred CCCCEEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 457999999999 568999999999999999999999964 89999999999986
No 26
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=2.2e-66 Score=450.12 Aligned_cols=205 Identities=33% Similarity=0.727 Sum_probs=187.9
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~ 78 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEWIVQE 78 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS--SSCGGGCCCHHHHHHHHHHH
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC--CCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999986 37899999999999999985
Q ss_pred --CCCCCCCCCcCCCCC---CccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCC
Q psy1705 178 --GGLMKEEDYPYKGKQ---SICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252 (309)
Q Consensus 178 --~Gi~~e~~yPY~~~~---~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~ 252 (309)
+|+++|++|||.... +.|.........++++|..++. ++++||++|+++|||+|+|++ ++|++|++|||..
T Consensus 79 ~~gGi~~e~~yPY~~~~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~ik~~l~~~gPV~v~~~~--~~f~~Y~~Giy~~- 154 (215)
T 3i06_A 79 NNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA--SSWMTYTGGVMTS- 154 (215)
T ss_dssp STTEEEC-CCSCCCCTTSCCCCCCCSSCCEEEEEEEEEECCS-CHHHHHHHHHHHCCEEEEECC--TTGGGCCSSEECS-
T ss_pred ccccccccCccCCcCCCCCCCccccCCcccceEecceEEeCC-hHHHHHHHHHHCCCEEEEEEc--hHHhcCCCCcccC-
Confidence 479999999999754 3788776666789999999985 899999999999999999998 4899999999974
Q ss_pred CCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecCCcccccceeeEeeC
Q psy1705 253 ACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309 (309)
Q Consensus 253 ~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~~ 309 (309)
|....++|||+|||| |++|||||||||++|||+|||||+|+.|+|||++++++|+|
T Consensus 155 -~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 155 -CVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214 (215)
T ss_dssp -CCCSCCCEEEEEEEEESSSSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEEE
T ss_pred -CCCCccCcEEEEEEEeccCCcEEEEEECCCCCCcccCceEEEecCCCeecCCCceeEEec
Confidence 656678999999999 67899999999999999999999999999999999999985
No 27
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=3.3e-66 Score=448.71 Aligned_cols=206 Identities=36% Similarity=0.768 Sum_probs=190.2
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+.. +.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~ 78 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA--SHGCNGGWMNNAFQYIITN 78 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--SCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCC--CCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999863 7899999999999999986
Q ss_pred CCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCC
Q psy1705 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSD 257 (309)
Q Consensus 178 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 257 (309)
+|+++|++|||.+.++.|+... ...+++.+|..++..++++||++|++ |||+|+|++..++|++|++|||.. .|. .
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~-~c~-~ 154 (215)
T 1iwd_A 79 GGIDTQQNYPYSAVQGSCKPYR-LRVVSINGFQRVTRNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIFTG-PCG-T 154 (215)
T ss_dssp TCBCBTTTSCCCSSCCCCCTTC-CCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCC-C
T ss_pred CCcccccccCccCCCCCCCCCC-CceEEeCcEEEeCCCcHHHHHHHHHh-CCEEEEEecCCcchhhcCCceECC-CCC-C
Confidence 6999999999999999998765 35678999999987789999999996 999999999744899999999987 474 4
Q ss_pred CCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecC----CcccccceeeEeeC
Q psy1705 258 YVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN----NRCGIANYAVYALI 309 (309)
Q Consensus 258 ~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 309 (309)
.++|||+|||| |++|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 155 ~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 155 AQNHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred cCCEEEEEEEEeccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 68999999999 568999999999999999999999975 89999999999985
No 28
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.9e-66 Score=458.65 Aligned_cols=209 Identities=36% Similarity=0.699 Sum_probs=193.0
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHH
Q psy1705 97 LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQF 176 (309)
Q Consensus 97 ~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 176 (309)
+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+. .+.||+||++..|++|+++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~--~~~gC~GG~~~~a~~y~~~ 78 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD--ESEGCYNGWHYQSFEWVVK 78 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSBTTTBCCHHHHHHHHHH
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999985 4789999999999999998
Q ss_pred hCCCCCCCCCcCCCCCCccCCCCCCceEEecee---EEcCCCCHHHHHHHHhc---CCCEEEEEEeCChhhhccCCceec
Q psy1705 177 AGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW---SVLPPQDEHALKVTLAT---VGPIAVSINASPHTFQLYASGIYD 250 (309)
Q Consensus 177 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~---~~v~~~~~~~ik~~l~~---~gPV~v~~~~~~~~f~~y~~Gi~~ 250 (309)
++||++|++|||.+.++.|+.......+++++| ..++..++++||++|++ +|||+|+|++ ++|++|++|||.
T Consensus 79 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy~ 156 (246)
T 2b1m_A 79 HGGIASEADYPYKARDGKCKANEIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIYD 156 (246)
T ss_dssp TTCBCBTTTSCCCSSCCCCCGGGCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEEC
T ss_pred hCCcCccccccccCCCCcCcCCCCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceeec
Confidence 779999999999999999987665567789999 88877789999999998 5999999998 699999999999
Q ss_pred CCCCCCCC-CCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecC----CcccccceeeEeeC
Q psy1705 251 DEACTSDY-VNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGN----NRCGIANYAVYALI 309 (309)
Q Consensus 251 ~~~~~~~~-~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 309 (309)
.+.|.... ++|||+|||| |++|||||||||++|||+|||||+|+. |+|||++.++||++
T Consensus 157 ~~~c~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 157 GGNCSSPYGINHFVLIVGYGSEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp CTTCCSSCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred CCCCCCCCcCceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 87786544 8999999999 568999999999999999999999976 99999999999985
No 29
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=4e-66 Score=449.24 Aligned_cols=206 Identities=37% Similarity=0.726 Sum_probs=190.0
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~ 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK--HSYGCKGGYQTTSLQYVANN 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHH
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHc
Confidence 7999999999999999999999999999999999999999999999999999999983 58899999999999999999
Q ss_pred CCCCCCCCCcCCCCCCccCCCCC-CceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCC
Q psy1705 178 GGLMKEEDYPYKGKQSICKFKRP-NIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTS 256 (309)
Q Consensus 178 ~Gi~~e~~yPY~~~~~~c~~~~~-~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~ 256 (309)
||++|++|||.+..+.|+.... ...+++.+|..++..++++||++|++ |||+|+|+++.++|++|++|||.. .|.
T Consensus 79 -Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~-~~~- 154 (218)
T 1yal_A 79 -GVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALAN-QPLSVLVEAGGKPFQLYKSGVFDG-PCG- 154 (218)
T ss_dssp -CBCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECC-SCC-
T ss_pred -CCCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHh-CCEEEEEeccchhccccCCceECC-CCC-
Confidence 9999999999999899987633 45678999999987789999999996 999999999657999999999986 474
Q ss_pred CCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEec----CCcccccceeeEeeC
Q psy1705 257 DYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRG----NNRCGIANYAVYALI 309 (309)
Q Consensus 257 ~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~----~~~Cgi~~~~~~p~~ 309 (309)
..++|||+|||| |++|||||||||++|||+|||||+|+ .|.|||+++++||++
T Consensus 155 ~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 155 TKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp SCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred CCCCEEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 457999999999 56899999999999999999999996 489999999999985
No 30
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=1.5e-66 Score=454.15 Aligned_cols=211 Identities=36% Similarity=0.804 Sum_probs=195.7
Q ss_pred CCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHH
Q psy1705 96 VLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQ 175 (309)
Q Consensus 96 ~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~ 175 (309)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+...++.||+||++..|++|++
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999765689999999999999999
Q ss_pred HhCCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCC
Q psy1705 176 FAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255 (309)
Q Consensus 176 ~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~ 255 (309)
+++||++|++|||.+.++.|+........++.+|..++..++++||++|+ +|||+|+|++..++|++|++|||. +.|
T Consensus 85 ~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~-~gPV~v~i~~~~~~f~~y~~Giy~-~~~- 161 (224)
T 3f75_A 85 DSGGICSEDAYPYLARDEECRAQSCEKVVKILGFKDVPRRSEAAMKAALA-KSPVSIAIEADQMPFQFYHEGVFD-ASC- 161 (224)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCGGGSCCCBCCSEEEECCSSCHHHHHHHHH-HSCEEEEECCCSHHHHTEEEEEEC-CCC-
T ss_pred HhCCccccccCCCcCCCCCCCcCCCCceEEeccEEEeCCChHHHHHHHHc-CCCEEEEEeccchhhhcCccceEC-CCC-
Confidence 83499999999999999999877666677899999998779999999999 799999999975699999999998 678
Q ss_pred CCCCCeEEEEEEeC------CCEEEEEcCCCCCCCCCceEEEEecC---CcccccceeeEeeC
Q psy1705 256 SDYVNHAMLLVGYT------RNSWILKNWWSHHWGDNGYMYLKRGN---NRCGIANYAVYALI 309 (309)
Q Consensus 256 ~~~~~Hav~iVGyg------~~ywivkNSWG~~WG~~Gy~~i~~~~---~~Cgi~~~~~~p~~ 309 (309)
...++|||+||||| ++|||||||||++||++|||||+|+. |.|||+++++||++
T Consensus 162 ~~~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 162 GTDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPVM 224 (224)
T ss_dssp CCCCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEEC
T ss_pred CCccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeeeC
Confidence 56789999999993 45999999999999999999999987 99999999999986
No 31
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=2.9e-66 Score=451.44 Aligned_cols=207 Identities=34% Similarity=0.742 Sum_probs=186.6
Q ss_pred CCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHh
Q psy1705 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFA 177 (309)
Q Consensus 98 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~ 177 (309)
||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+.. +.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~~~~~ 78 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX--XXXXXGGDADDAFRWVITN 78 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC--------CCCHHHHHHHHHHH
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc--ccccCCCCHHHHHHHHHHc
Confidence 79999999999999999999999999999999999999999999999999999999974 8899999999999999988
Q ss_pred CCCCCCCCCcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCC-ceecCCCCCC
Q psy1705 178 GGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS-GIYDDEACTS 256 (309)
Q Consensus 178 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~-Gi~~~~~~~~ 256 (309)
+||++|++|||.+.++.|...... .+++.+|..++ .++++||++|. +|||+|+|+++.++|++|++ |||..+.|..
T Consensus 79 ~Gi~~e~~yPY~~~~~~C~~~~~~-~~~i~~~~~v~-~~~~~i~~~l~-~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~ 155 (222)
T 3u8e_A 79 GGIASDANYPYTGVDGTCDLNKPI-AARIDGYTNVP-NSSSALLDAVA-KQPVSVNIYTSSTSFQLYTGPGIFAGSSCSD 155 (222)
T ss_dssp TCBCBTTTSCCCSSCCCCCCCSCC-CBCCCEEEECC-SCHHHHHHHHH-HSCEEEEECCCSHHHHTCCCSSCBCCTTCCC
T ss_pred CCccchhcCCCcccCCccccCCCC-eEEEccEEEeC-CcHHHHHHHHh-CCCEEEEEEecChhhhcEeCCceECCCcccC
Confidence 899999999999999999876554 78899999998 69999999996 59999999997569999999 9999877854
Q ss_pred --CCCCeEEEEEEe-----CCCEEEEEcCCCCCCCCCceEEEEecCC----cccccceeeEeeC
Q psy1705 257 --DYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRGNN----RCGIANYAVYALI 309 (309)
Q Consensus 257 --~~~~Hav~iVGy-----g~~ywivkNSWG~~WG~~Gy~~i~~~~~----~Cgi~~~~~~p~~ 309 (309)
..++|||+|||| |++|||||||||++|||+|||||+|+.| +|||+++++||++
T Consensus 156 ~~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 156 DPATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp CGGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred CCCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 267999999999 4679999999999999999999999766 9999999999985
No 32
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=2.2e-65 Score=447.59 Aligned_cols=209 Identities=34% Similarity=0.746 Sum_probs=190.5
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHH
Q psy1705 97 LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQF 176 (309)
Q Consensus 97 ~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 176 (309)
+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+.. .+.||+||++..|++|+++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-~~~gC~GG~~~~a~~y~~~ 79 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD-QNQGCNGGLMDYAFEFIKQ 79 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCTTBCBCHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCC-CCCCCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999999863 4789999999999999998
Q ss_pred hCCCCCCCCCcCCCCCCccCCC-CCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCC
Q psy1705 177 AGGLMKEEDYPYKGKQSICKFK-RPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACT 255 (309)
Q Consensus 177 ~~Gi~~e~~yPY~~~~~~c~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~ 255 (309)
++|+++|++|||.+..+.|+.. .....+++.+|..++..++++|+++|++ |||+|+|++..++|++|++|||.. .|.
T Consensus 80 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~-~c~ 157 (229)
T 1s4v_A 80 RGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTG-SCG 157 (229)
T ss_dssp HTCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-CCC
T ss_pred hCCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhc-CCEEEEEEeCcHHHhhCCCcEECC-CCC
Confidence 7799999999999998999864 2335678999999987789999999997 999999999558999999999986 474
Q ss_pred CCCCCeEEEEEEe-----CCCEEEEEcCCCCCCCCCceEEEEec----CCcccccceeeEeeC
Q psy1705 256 SDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRG----NNRCGIANYAVYALI 309 (309)
Q Consensus 256 ~~~~~Hav~iVGy-----g~~ywivkNSWG~~WG~~Gy~~i~~~----~~~Cgi~~~~~~p~~ 309 (309)
..++|||+|||| |++|||||||||++|||+|||||+|+ .|+|||+++++||++
T Consensus 158 -~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 158 -TELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp -CCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred -CCCCeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEe
Confidence 457999999999 45899999999999999999999996 489999999999985
No 33
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=2.9e-65 Score=453.85 Aligned_cols=209 Identities=33% Similarity=0.739 Sum_probs=191.2
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHH
Q psy1705 97 LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQF 176 (309)
Q Consensus 97 ~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~ 176 (309)
+||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+|+||+.. ++.||+||++..|++|+++
T Consensus 3 ~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 3 DLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCGGGCBCHHHHHHHHHH
T ss_pred CCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCC-CCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999999863 5789999999999999998
Q ss_pred hCCCCCCCCCcCCCCCCccCCCC---CCc-eEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCC
Q psy1705 177 AGGLMKEEDYPYKGKQSICKFKR---PNI-VVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE 252 (309)
Q Consensus 177 ~~Gi~~e~~yPY~~~~~~c~~~~---~~~-~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~ 252 (309)
++||++|++|||.+..+.|+... ... .+++.+|..++..++++||++|++ |||+|+|+++.++|++|++|||..
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~-GPV~v~i~~~~~~f~~Y~sGVy~~- 159 (262)
T 2fo5_A 82 NGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTG- 159 (262)
T ss_dssp TTCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECC-
T ss_pred cCCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHh-CCEEEEEecChHHHhccCCceECC-
Confidence 77999999999999999998653 345 688999999987789999999997 999999999657999999999987
Q ss_pred CCCCCCCCeEEEEEEe-----CCCEEEEEcCCCCCCCCCceEEEEecC----CcccccceeeEeeC
Q psy1705 253 ACTSDYVNHAMLLVGY-----TRNSWILKNWWSHHWGDNGYMYLKRGN----NRCGIANYAVYALI 309 (309)
Q Consensus 253 ~~~~~~~~Hav~iVGy-----g~~ywivkNSWG~~WG~~Gy~~i~~~~----~~Cgi~~~~~~p~~ 309 (309)
.|. ...+|||+|||| |++|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 160 ~c~-~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 160 ECG-TELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp CCC-CCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred CCC-CcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 584 457999999999 468999999999999999999999965 56999999999985
No 34
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=5.2e-65 Score=448.53 Aligned_cols=207 Identities=32% Similarity=0.672 Sum_probs=190.8
Q ss_pred CCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHH
Q psy1705 95 SVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174 (309)
Q Consensus 95 ~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~ 174 (309)
..+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+.. +.||+||++..|++|+
T Consensus 15 ~~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~--~~gC~GG~~~~a~~yi 92 (241)
T 2oul_A 15 ENFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFK--NYGCNGGLINNAFEDM 92 (241)
T ss_dssp CCCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTT--SCTTBCBCHHHHHHHH
T ss_pred cccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCC--CCCCCCCCHHHHHHHH
Confidence 34799999999999999999999999999999999999999999999999999999999863 7899999999999999
Q ss_pred HHhCCCCCCCCCcCCCCCCc-cCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCC
Q psy1705 175 QFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253 (309)
Q Consensus 175 ~~~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~ 253 (309)
.++.|+++|++|||.+..+. |+.......+++.+|..++..++++||++| |||+|+|++. ++|++|++|||.. .
T Consensus 93 ~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~-~~f~~Y~~Giy~~-~ 167 (241)
T 2oul_A 93 IELGGICPDGDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEALRFL---GPISISVAVS-DDFAFYKEGIFDG-E 167 (241)
T ss_dssp HHTTSBCBTTSSCCCTTSCCCCCTTSSSCCBCCSEEEECCTTCHHHHHHHT---CCEEEEECBC-HHHHTCCSSBCCS-C
T ss_pred HHhCCcCccccCCCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecC-cchhhcCCcEEcC-c
Confidence 98449999999999998888 998766677899999999877899999999 9999999997 8999999999987 6
Q ss_pred CCCCCCCeEEEEEEeC--------------CCEEEEEcCCCCCCCCCceEEEEecCCc----ccccceeeEeeC
Q psy1705 254 CTSDYVNHAMLLVGYT--------------RNSWILKNWWSHHWGDNGYMYLKRGNNR----CGIANYAVYALI 309 (309)
Q Consensus 254 ~~~~~~~Hav~iVGyg--------------~~ywivkNSWG~~WG~~Gy~~i~~~~~~----Cgi~~~~~~p~~ 309 (309)
|... ++|||+||||| .+|||||||||++|||+|||||+|+.|. |||++.++||++
T Consensus 168 c~~~-~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 168 CGDQ-LNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp BCSS-CCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred CCCC-CCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 8544 89999999993 2699999999999999999999997666 999999999986
No 35
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=7.2e-65 Score=448.16 Aligned_cols=207 Identities=37% Similarity=0.667 Sum_probs=190.7
Q ss_pred CCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHH
Q psy1705 95 SVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYV 174 (309)
Q Consensus 95 ~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~ 174 (309)
..+||++||||++|+|+||||||.||||||||++++||++++++++..+.||+|+|+||+.. +.||+||++..|++|+
T Consensus 17 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~--~~gC~GG~~~~a~~y~ 94 (243)
T 3bwk_A 17 AKLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVK--NNGCYGGYITNAFDDM 94 (243)
T ss_dssp CCCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTT--SCGGGCCCHHHHHHHH
T ss_pred cccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCC--CCCCCCCCHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999863 7899999999999999
Q ss_pred HHhCCCCCCCCCcCCCCCCc-cCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCC
Q psy1705 175 QFAGGLMKEEDYPYKGKQSI-CKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEA 253 (309)
Q Consensus 175 ~~~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~ 253 (309)
+++.|+++|++|||.+..+. |+.......+++++|..++..++++||++| |||+|+|++. ++|++|++|||.. .
T Consensus 95 ~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~-~~f~~Y~~Giy~~-~ 169 (243)
T 3bwk_A 95 IDLGGLCSQDDYPYVSNLPETCNLKRCNERYTIKSYVSIPDDKFKEALRYL---GPISISIAAS-DDFAFYRGGFYDG-E 169 (243)
T ss_dssp HHTTSBCBTTTSCCCTTSCCCCCGGGCSSCBCCCEEEECCTTCHHHHHHHT---CCEEEEECCC-HHHHTCCSSSCCC-C
T ss_pred HHhCCcccccccCCcCCCCCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecC-hhHHhcCCceecC-C
Confidence 98449999999999998888 987666667899999999877899999999 9999999997 8999999999988 6
Q ss_pred CCCCCCCeEEEEEEeC--------------CCEEEEEcCCCCCCCCCceEEEEecCCc----ccccceeeEeeC
Q psy1705 254 CTSDYVNHAMLLVGYT--------------RNSWILKNWWSHHWGDNGYMYLKRGNNR----CGIANYAVYALI 309 (309)
Q Consensus 254 ~~~~~~~Hav~iVGyg--------------~~ywivkNSWG~~WG~~Gy~~i~~~~~~----Cgi~~~~~~p~~ 309 (309)
|... ++|||+||||| .+|||||||||++|||+|||||+|+.|. |||+++++||++
T Consensus 170 c~~~-~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 170 CGAA-PNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp CCSS-CCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred CCCc-CCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 8554 89999999993 3699999999999999999999997666 999999999986
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=3.7e-62 Score=436.49 Aligned_cols=209 Identities=26% Similarity=0.476 Sum_probs=177.9
Q ss_pred CCCCCceecccC----CCCCcccCCCCCcchHHHHHHHHHHHHHHHHcC--CCCcCCHHHHHhhcCCCCCCCCCCCchHH
Q psy1705 96 VLIPDHLDWREK----GFITPDWNQEDCGACYAFSIASAIQGQIFKSTS--EIEELSIQQVVDCSIISGNLGCAGGSLRN 169 (309)
Q Consensus 96 ~~lP~~~Dwr~~----g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~--~~~~lS~q~l~dc~~~~~~~gc~GG~~~~ 169 (309)
.+||++||||++ +.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+..+.+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 479999999987 789999999999999999999999999999875 47999999999998633468999999999
Q ss_pred HHHHHHHhCCCCC-------CCCCcCC---------CCCCccCCC---------C----C----CceEEeceeEEcCCCC
Q psy1705 170 TLNYVQFAGGLMK-------EEDYPYK---------GKQSICKFK---------R----P----NIVVDISSWSVLPPQD 216 (309)
Q Consensus 170 a~~~~~~~~Gi~~-------e~~yPY~---------~~~~~c~~~---------~----~----~~~~~i~~~~~v~~~~ 216 (309)
|++|++++ |+++ |.+|||. +..+.|... . . ........+..++ .+
T Consensus 85 a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~ 162 (266)
T 3cbj_A 85 AWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NS 162 (266)
T ss_dssp HHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECC-SC
T ss_pred HHHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeC-CC
Confidence 99999998 9999 9999998 344556421 0 0 0011122344565 48
Q ss_pred HHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEE
Q psy1705 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLK 292 (309)
Q Consensus 217 ~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~ 292 (309)
+++||++|+++|||+|+|++. ++|++|++|||.++ |....++|||+|||| |++|||||||||++|||+|||||+
T Consensus 163 ~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~-~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~ 240 (266)
T 3cbj_A 163 EKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHV-TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKIL 240 (266)
T ss_dssp HHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCC-SSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred HHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecC-CCCccCCeEEEEEEecccCCceEEEEEcCCCCccCCCCEEEEE
Confidence 999999999999999999997 79999999999876 434457999999999 578999999999999999999999
Q ss_pred ecCCcccccceeeEee
Q psy1705 293 RGNNRCGIANYAVYAL 308 (309)
Q Consensus 293 ~~~~~Cgi~~~~~~p~ 308 (309)
|+.|.|||++.+++++
T Consensus 241 rg~n~cgI~~~~~~~~ 256 (266)
T 3cbj_A 241 RGQDHCGIESEVVAGI 256 (266)
T ss_dssp CSSCGGGTTTSCEECC
T ss_pred cCCCcccccCceEEEE
Confidence 9889999999998875
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=1.3e-61 Score=430.44 Aligned_cols=207 Identities=28% Similarity=0.532 Sum_probs=176.5
Q ss_pred CCCCceecccC----CCCCcccCCCCCcchHHHHHHHHHHHHHHHHcC--CCCcCCHHHHHhhcCCCCCCCCCCCchHHH
Q psy1705 97 LIPDHLDWREK----GFITPDWNQEDCGACYAFSIASAIQGQIFKSTS--EIEELSIQQVVDCSIISGNLGCAGGSLRNT 170 (309)
Q Consensus 97 ~lP~~~Dwr~~----g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~--~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a 170 (309)
+||++||||++ +.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+.. .+.||+||++..|
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a 80 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCES-CGLGCEGGILGPA 80 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTT-SBCTTBCBCHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcC-CCCCCCCCCHHHH
Confidence 69999999998 689999999999999999999999999999976 6899999999999864 4689999999999
Q ss_pred HHHHHHhCCCCCCCCC-------cCC---------CCCCccCCC--------------CCCce----EEeceeEEcCCCC
Q psy1705 171 LNYVQFAGGLMKEEDY-------PYK---------GKQSICKFK--------------RPNIV----VDISSWSVLPPQD 216 (309)
Q Consensus 171 ~~~~~~~~Gi~~e~~y-------PY~---------~~~~~c~~~--------------~~~~~----~~i~~~~~v~~~~ 216 (309)
++|++++ ||++|++| ||. +..+.|... ..... ........++ .+
T Consensus 81 ~~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~ 158 (254)
T 3qsd_A 81 WDYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-ND 158 (254)
T ss_dssp HHHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SC
T ss_pred HHHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-Cc
Confidence 9999998 99999988 997 344455321 00000 0111223555 38
Q ss_pred HHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEE
Q psy1705 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLK 292 (309)
Q Consensus 217 ~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~ 292 (309)
+++||++|+++|||+|+|++. ++|++|++|||..+.+ ...++|||+|||| |++|||||||||++|||+|||||+
T Consensus 159 ~~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~-~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~ 236 (254)
T 3qsd_A 159 EKAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITG-ETLGGHAIRIIGWGVENKAPYWLIANSWNEDWGENGYFRIV 236 (254)
T ss_dssp HHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSS-CEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCC-CCCCCeEEEEEEEeecCCeeEEEEEeCCCCCcccCCeEEEE
Confidence 999999999999999999997 8999999999998654 4567999999999 678999999999999999999999
Q ss_pred ecCCcccccceeeEee
Q psy1705 293 RGNNRCGIANYAVYAL 308 (309)
Q Consensus 293 ~~~~~Cgi~~~~~~p~ 308 (309)
|+.|+|||++.++..+
T Consensus 237 rg~n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 237 RGRDECSIESEVTAGR 252 (254)
T ss_dssp CSSCGGGTTSSEEEEE
T ss_pred cCCCeecCCCceEeec
Confidence 9989999999988654
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=2.5e-61 Score=432.83 Aligned_cols=206 Identities=25% Similarity=0.532 Sum_probs=184.4
Q ss_pred CCCCCCceecccC---CCCCcccCCC---CCcchHHHHHHHHHHHHHHHHcC-C--CCcCCHHHHHhhcCCCCCCCCCCC
Q psy1705 95 SVLIPDHLDWREK---GFITPDWNQE---DCGACYAFSIASAIQGQIFKSTS-E--IEELSIQQVVDCSIISGNLGCAGG 165 (309)
Q Consensus 95 ~~~lP~~~Dwr~~---g~v~pV~dQg---~cgsCwAfa~~~~~e~~~~~~~~-~--~~~lS~q~l~dc~~~~~~~gc~GG 165 (309)
..+||++||||++ ++|+|||||| .||||||||++++||++++|+++ . .+.||+|+|+||+. ..||+||
T Consensus 33 ~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~---~~gC~GG 109 (277)
T 1deu_A 33 PADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN---AGSCEGG 109 (277)
T ss_dssp GGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS---SEETBEE
T ss_pred cccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC---CCCCCCC
Confidence 3579999999998 6899999999 99999999999999999999875 4 47999999999985 4799999
Q ss_pred chHHHHHHHHHhCCCCCCCCCcCCCCCCccCC-C--------------CCCceEEeceeEEcCCCCHHHHHHHHhcCCCE
Q psy1705 166 SLRNTLNYVQFAGGLMKEEDYPYKGKQSICKF-K--------------RPNIVVDISSWSVLPPQDEHALKVTLATVGPI 230 (309)
Q Consensus 166 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~-~--------------~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV 230 (309)
++..|++|++++ ||++|++|||.+.++.|.. . .....+++.+|..++ ++++||++|+++|||
T Consensus 110 ~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV 186 (277)
T 1deu_A 110 NDLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPI 186 (277)
T ss_dssp CHHHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCE
T ss_pred CHHHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCE
Confidence 999999999998 9999999999998888873 1 112346788888886 689999999999999
Q ss_pred EEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe----CCCEEEEEcCCCCCCCCCceEEEEecCC--------cc
Q psy1705 231 AVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSWILKNWWSHHWGDNGYMYLKRGNN--------RC 298 (309)
Q Consensus 231 ~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy----g~~ywivkNSWG~~WG~~Gy~~i~~~~~--------~C 298 (309)
+|+|++. ++|++|++|||..+.| ...++|||+|||| |++|||||||||++|||+|||||+|+.| .|
T Consensus 187 ~v~i~~~-~~f~~Y~~GIy~~~~~-~~~~~HaV~iVGyg~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~c 264 (277)
T 1deu_A 187 SCGIMAT-ERLANYTGGIYAEYQD-TTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNL 264 (277)
T ss_dssp EEEECCC-HHHHTCCSSEECBCCS-CCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBT
T ss_pred EEEEecc-cccccCcCcEECCCCC-CCcCCeEEEEEEecccCCccEEEEEeCCCCccCCCcEEEEEcCCCcccccccccc
Confidence 9999997 8999999999998766 4578999999999 5789999999999999999999999888 99
Q ss_pred cccceeeEee
Q psy1705 299 GIANYAVYAL 308 (309)
Q Consensus 299 gi~~~~~~p~ 308 (309)
||++.+++++
T Consensus 265 gIe~~~~~~~ 274 (277)
T 1deu_A 265 AIEEHCTFGD 274 (277)
T ss_dssp TTTSCEEEEE
T ss_pred eeccccEeec
Confidence 9999999876
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=3.3e-57 Score=404.71 Aligned_cols=204 Identities=22% Similarity=0.372 Sum_probs=167.7
Q ss_pred CceecccC-CCCC--cccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCCCCCCCCCCCc-hHHHHHHHH
Q psy1705 100 DHLDWREK-GFIT--PDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGS-LRNTLNYVQ 175 (309)
Q Consensus 100 ~~~Dwr~~-g~v~--pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~gc~GG~-~~~a~~~~~ 175 (309)
--.|||+. |+++ ||||||.||||||||++++||++++++++..+.||+|+|+||+...++.||+||. +..++.+++
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 45899999 6877 9999999999999999999999999998899999999999999755689999986 555678888
Q ss_pred HhCCCCCCCCCcCCCC--CCccCCCCC-----------------CceEEeceeEEcCC----CC----HHHHHHHHhcCC
Q psy1705 176 FAGGLMKEEDYPYKGK--QSICKFKRP-----------------NIVVDISSWSVLPP----QD----EHALKVTLATVG 228 (309)
Q Consensus 176 ~~~Gi~~e~~yPY~~~--~~~c~~~~~-----------------~~~~~i~~~~~v~~----~~----~~~ik~~l~~~g 228 (309)
+++||++|++|||... .+.|+.... ....++.+|..++. .+ +++||++|+++|
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 8844999999999863 467875421 12346778877764 24 478999999999
Q ss_pred CEEEEEEeCChhhhccC-CceecCCCCCCCCCCeEEEEEEeCC---------CEEEEEcCCCCCCCCCceEEEEe-cCCc
Q psy1705 229 PIAVSINASPHTFQLYA-SGIYDDEACTSDYVNHAMLLVGYTR---------NSWILKNWWSHHWGDNGYMYLKR-GNNR 297 (309)
Q Consensus 229 PV~v~~~~~~~~f~~y~-~Gi~~~~~~~~~~~~Hav~iVGyg~---------~ywivkNSWG~~WG~~Gy~~i~~-~~~~ 297 (309)
||+|+|++. +|+.|+ +|++..+.|....++|||+|||||. +|||||||||++|||+|||||+| +.|+
T Consensus 169 PV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~n~ 246 (265)
T 2wbf_X 169 SVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGPTH 246 (265)
T ss_dssp CEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCCTT
T ss_pred CEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCCCc
Confidence 999999975 687775 5655444686567899999999952 69999999999999999999997 7899
Q ss_pred ccccceee
Q psy1705 298 CGIANYAV 305 (309)
Q Consensus 298 Cgi~~~~~ 305 (309)
|||++.+.
T Consensus 247 Cgi~~~~~ 254 (265)
T 2wbf_X 247 CHFNFIHS 254 (265)
T ss_dssp CSSCSCCE
T ss_pred cCcceeEE
Confidence 99666443
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=1.8e-55 Score=397.96 Aligned_cols=232 Identities=19% Similarity=0.259 Sum_probs=181.2
Q ss_pred eEeecccCCCCCHHHHHHHhcccccCccccc-cccCCCCCCCCCCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHH
Q psy1705 55 YTLRENHLSDLHPRHYIKEMTRLTHSRIRRT-LVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQG 133 (309)
Q Consensus 55 ~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~ 133 (309)
..-..|++.++..|.++..++-.+.+...++ .+.++. ....+||++||||+++ ||||||.||||||||++++||+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~lG~~p~~~d~rd~~~~~~~-~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~alE~ 89 (291)
T 3ois_A 14 LVPRGSHMQTVLKRRKKSGYGYIPDIADIRDFSYTPEK-SVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAAAIQF 89 (291)
T ss_dssp ---------CCCCCCCCTTCCEECCCCCTTCCBCCCCH-HHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHHHHHH
T ss_pred cccchhhHhHhhhccccccCCCCCCCCcccccccCCCc-cccccCCcceecccCC---CcccCCCCccHHHHHHHHHHHH
Confidence 4456789999999888876644332222222 232221 0124899999999984 9999999999999999999999
Q ss_pred HHHHHcCCCCcCCHHHHH--hhcCC-CCC-CCCCCCchHHHHHHHHHhCCCCCCCCCcCCCCC---CccCCCC-------
Q psy1705 134 QIFKSTSEIEELSIQQVV--DCSII-SGN-LGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ---SICKFKR------- 199 (309)
Q Consensus 134 ~~~~~~~~~~~lS~q~l~--dc~~~-~~~-~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~c~~~~------- 199 (309)
++++ ++..+.||+|+|+ +|... .++ .+|.||++..|++|++++ ||++|++|||.+.+ +.|...+
T Consensus 90 ~~~~-~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~~~~~ 167 (291)
T 3ois_A 90 ERIH-DKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAPASKK 167 (291)
T ss_dssp HHHH-TTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCGGGSC
T ss_pred HHHH-hCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCccccccccccccccccCC
Confidence 8864 6778899999998 68642 234 357899999999999998 99999999999863 4565521
Q ss_pred -------CCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCC--ceecCCCCCCC-CCCeEEEEEEe-
Q psy1705 200 -------PNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYAS--GIYDDEACTSD-YVNHAMLLVGY- 268 (309)
Q Consensus 200 -------~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~--Gi~~~~~~~~~-~~~Hav~iVGy- 268 (309)
....+++++|..|+. ++++||++|+++|||+|+|++. ++|+.|++ |||..+.|... .++|||+||||
T Consensus 168 p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~iVGy~ 245 (291)
T 3ois_A 168 PSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLCVGYD 245 (291)
T ss_dssp CCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEEEEEE
T ss_pred CCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEEEEEe
Confidence 123568999999986 8999999999999999999997 89999998 99998887544 36999999999
Q ss_pred -CCCEEEEEcCCCCCCCCCceEEEEec
Q psy1705 269 -TRNSWILKNWWSHHWGDNGYMYLKRG 294 (309)
Q Consensus 269 -g~~ywivkNSWG~~WG~~Gy~~i~~~ 294 (309)
|++|||||||||++||++|||||+|+
T Consensus 246 ~~~~ywivkNSWG~~WG~~Gy~~i~~~ 272 (291)
T 3ois_A 246 DEIRHFRIRNSWGNNVGEDGYFWMPYE 272 (291)
T ss_dssp TTTTEEEEECSBCTTSTBTTEEEEEHH
T ss_pred CCCCEEEEEeCCCCCCCCCcEEEEEHH
Confidence 67899999999999999999999994
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=2.9e-43 Score=330.35 Aligned_cols=205 Identities=17% Similarity=0.240 Sum_probs=158.9
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHH-cCCCCcCCH----------------HHHHhhcCC---
Q psy1705 97 LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKS-TSEIEELSI----------------QQVVDCSII--- 156 (309)
Q Consensus 97 ~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~-~~~~~~lS~----------------q~l~dc~~~--- 156 (309)
..|..|+++....++||+|||+||+|||||++++||+.++++ +++.+.||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 457788888888899999999999999999999999999998 578999999 999999853
Q ss_pred ---------CCCCCCCCCchHHHHHHHHHhCCCCCCCCCcCCCCC---------------------------C------c
Q psy1705 157 ---------SGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQ---------------------------S------I 194 (309)
Q Consensus 157 ---------~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 194 (309)
.++.+|+||....|+.+++++ ||+++++|||+... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHHc-CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 247899999999999999998 99999999998741 1 1
Q ss_pred ----------------c----------CCCCC------------------CceE--EeceeEEc----------------
Q psy1705 195 ----------------C----------KFKRP------------------NIVV--DISSWSVL---------------- 212 (309)
Q Consensus 195 ----------------c----------~~~~~------------------~~~~--~i~~~~~v---------------- 212 (309)
| ..... .... .+.+|..|
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 5 21000 0011 33444433
Q ss_pred -----------------CCCCH-HHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCC--------------------
Q psy1705 213 -----------------PPQDE-HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC-------------------- 254 (309)
Q Consensus 213 -----------------~~~~~-~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~-------------------- 254 (309)
+.... +.++.+|.++|||+++++++ .+.++++|||+.+.|
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~--~~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVG--KHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeC--hhhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 21111 45567899999999999997 355569999987655
Q ss_pred -CCCCCCeEEEEEEeC--C------CEEEEEcCCCCCCCCCceEEEEecCCcccccceeeEee
Q psy1705 255 -TSDYVNHAMLLVGYT--R------NSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308 (309)
Q Consensus 255 -~~~~~~Hav~iVGyg--~------~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~ 308 (309)
..+..+|||+||||| . +|||||||||++||++|||+|+++ .++.++..++
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~----wf~ey~~~vv 422 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE----WFSEYVYEVV 422 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH----HHHHHEEEEE
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh----hHhhceEEEE
Confidence 124679999999996 2 699999999999999999999984 4555544443
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=1.5e-41 Score=319.02 Aligned_cols=205 Identities=18% Similarity=0.228 Sum_probs=145.4
Q ss_pred CCCCceecccCCCCCcccCCCCCcchHHHHHHHHHHHHHHHH-cCCCCcCCH----------------HHHHhhcCC-C-
Q psy1705 97 LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKS-TSEIEELSI----------------QQVVDCSII-S- 157 (309)
Q Consensus 97 ~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~-~~~~~~lS~----------------q~l~dc~~~-~- 157 (309)
..|..|+++....+|||+|||+||+|||||+++++|+.++++ +++.+.||+ |+|+||+.. .
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~ 131 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDID 131 (457)
T ss_dssp HCCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred CCCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCccc
Confidence 467788888888899999999999999999999999999998 778999999 788999752 1
Q ss_pred --------CCCCCCCCchHHHHHHHHHhCCCCCCCCCcC-CCC---------------------------------C---
Q psy1705 158 --------GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY-KGK---------------------------------Q--- 192 (309)
Q Consensus 158 --------~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~--- 192 (309)
.+.+|+||....++.+++++ ||+++++||| +.. .
T Consensus 132 ~r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~ 210 (457)
T 2e01_A 132 SRLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIV 210 (457)
T ss_dssp SHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHH
T ss_pred chhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHH
Confidence 37899999999999999998 9999999999 320 0
Q ss_pred ------------------CccCCCC--C---------------------------------------------CceEEe-
Q psy1705 193 ------------------SICKFKR--P---------------------------------------------NIVVDI- 206 (309)
Q Consensus 193 ------------------~~c~~~~--~---------------------------------------------~~~~~i- 206 (309)
+.|...+ . ...+.+
T Consensus 211 ~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve 290 (457)
T 2e01_A 211 TLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKID 290 (457)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEET
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEe
Confidence 0011100 0 000000
Q ss_pred ----------ceeEEcCCCC-HHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCC-------------------CC
Q psy1705 207 ----------SSWSVLPPQD-EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC-------------------TS 256 (309)
Q Consensus 207 ----------~~~~~v~~~~-~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~-------------------~~ 256 (309)
..|..+|... .+.++.+|..+|||+++++++ .|.+|++|||+.+.| ..
T Consensus 291 ~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~ 368 (457)
T 2e01_A 291 RLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHE 368 (457)
T ss_dssp TCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTS
T ss_pred ccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCC
Confidence 0144444211 155677889999999999997 488899999975432 23
Q ss_pred CCCCeEEEEEEe-----CC--CEEEEEcCCCCCCCCCceEEEEecCCcccccceeeEee
Q psy1705 257 DYVNHAMLLVGY-----TR--NSWILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308 (309)
Q Consensus 257 ~~~~Hav~iVGy-----g~--~ywivkNSWG~~WG~~Gy~~i~~~~~~Cgi~~~~~~p~ 308 (309)
...+|||+|||| |+ +|||||||||++||++||++|+++ .++.++..++
T Consensus 369 s~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~----wf~ey~~~iv 423 (457)
T 2e01_A 369 SLMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK----YFEEYCFQIV 423 (457)
T ss_dssp CCCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH----HHHHHEEEEE
T ss_pred CCCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh----hHhhccEEEE
Confidence 467999999999 55 799999999999999999999994 4555555444
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=2.4e-35 Score=271.33 Aligned_cols=182 Identities=21% Similarity=0.233 Sum_probs=134.5
Q ss_pred CCCcccCCCCCcchHHHHHHHHHHHHHHHHcCCCCcCCHHHHHhhcCC----------CCCCCCCCCchHHHHHHHHHhC
Q psy1705 109 FITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSII----------SGNLGCAGGSLRNTLNYVQFAG 178 (309)
Q Consensus 109 ~v~pV~dQg~cgsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~----------~~~~gc~GG~~~~a~~~~~~~~ 178 (309)
.++||+|||+||+|||||+++++|+.+++++++.+.||+|+|++|+.. ..+.||+||....|++|++++
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 489999999999999999999999999999999999999999999741 125799999999999999998
Q ss_pred CCCCCCCCc------CCCCCC-------------ccCC--C---------------------------CC-----Cc---
Q psy1705 179 GLMKEEDYP------YKGKQS-------------ICKF--K---------------------------RP-----NI--- 202 (309)
Q Consensus 179 Gi~~e~~yP------Y~~~~~-------------~c~~--~---------------------------~~-----~~--- 202 (309)
||+++++|| +..... .+.. . +. ..
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 221100 0000 0 00 00
Q ss_pred --------eEEeceeEEcC---------------CC----------CH----HHHHHHHhcCCCEEEEEEeCChhhhccC
Q psy1705 203 --------VVDISSWSVLP---------------PQ----------DE----HALKVTLATVGPIAVSINASPHTFQLYA 245 (309)
Q Consensus 203 --------~~~i~~~~~v~---------------~~----------~~----~~ik~~l~~~gPV~v~~~~~~~~f~~y~ 245 (309)
.....+|..|. ++ .+ +.+..+|.++-||..+-+|+...|. +
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~--~ 257 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT--R 257 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC--T
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC--C
Confidence 00112222221 00 13 3455567788899999999833444 8
Q ss_pred CceecCCCC---------------------------------------------CCCCCCeEEEEEEe-----CCCEEEE
Q psy1705 246 SGIYDDEAC---------------------------------------------TSDYVNHAMLLVGY-----TRNSWIL 275 (309)
Q Consensus 246 ~Gi~~~~~~---------------------------------------------~~~~~~Hav~iVGy-----g~~ywiv 275 (309)
.||...++. ..+..+|||+|||| |++||||
T Consensus 258 ~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~yw~v 337 (383)
T 3pw3_A 258 DGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMV 337 (383)
T ss_dssp TSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEEEEE
T ss_pred CceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceEEEE
Confidence 898843210 01346899999999 6789999
Q ss_pred EcCCCCCCCCCceEEEEe
Q psy1705 276 KNWWSHHWGDNGYMYLKR 293 (309)
Q Consensus 276 kNSWG~~WG~~Gy~~i~~ 293 (309)
|||||++||++||++|++
T Consensus 338 kNSWg~~~g~~Gy~~m~~ 355 (383)
T 3pw3_A 338 KNSWGTNSKYNGIWYASK 355 (383)
T ss_dssp ECSBCSCSTTTTEEEEEH
T ss_pred EeCCCCCCCcCCeEEecH
Confidence 999999999999999997
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.81 E-value=8.3e-20 Score=138.51 Aligned_cols=74 Identities=24% Similarity=0.375 Sum_probs=68.5
Q ss_pred ChHHHHHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhccccc
Q psy1705 2 TNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTH 79 (309)
Q Consensus 2 ~~~~~~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~~ 79 (309)
++.++...|++|+++|+|.|.+..|+..|+.||++|+++|++||++ +.+|++|+|+|||||.+||++++++...
T Consensus 17 ~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~----~~sy~lglN~FaDLT~eEF~~~~lg~~~ 90 (106)
T 3f75_P 17 KEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ----GYSYSLKMNHFGDLSRDEFRRKYLGFKK 90 (106)
T ss_dssp CHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS----CCSEEECCCTTTTCCHHHHHHHSCCBCC
T ss_pred CcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc----CCCeeeCCcccccCCHHHHHHHHcCCCC
Confidence 5788999999999999999999889999999999999999999986 5799999999999999999999877654
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.79 E-value=1.4e-19 Score=131.30 Aligned_cols=70 Identities=19% Similarity=0.360 Sum_probs=63.3
Q ss_pred HHHHHHHHHHhCCccCChhhhHHHHHHHHHHHHHHHHHhhhhhcCCCceEeecccCCCCCHHHHHHHhcccc
Q psy1705 7 IIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLT 78 (309)
Q Consensus 7 ~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~~n~~~I~~~N~~~~~g~~s~~~g~N~fsd~t~~E~~~~~~~~~ 78 (309)
...|++|+.+|+|.|.+..|+..| .||++|++.|++||+++..|..+|++|+|+|+|||.+|| +.+.+..
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~ 76 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKK 76 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCC
Confidence 357999999999999887788999 999999999999999876778899999999999999999 8776654
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.99 E-value=7.8e-05 Score=60.21 Aligned_cols=126 Identities=16% Similarity=0.153 Sum_probs=88.3
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHHc--------CCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCC
Q psy1705 114 WNQEDCGACYAFSIASAIQGQIFKST--------SEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185 (309)
Q Consensus 114 ~dQg~cgsCwAfa~~~~~e~~~~~~~--------~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~ 185 (309)
..||.-+-|-+|+.++.|.+...... -....+|+++|.++ |..+...++|++.. |-...
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t----------~~~~~q~Iky~~s~-G~~~~-- 91 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC----------ATFPNQMIEYGKSQ-GRDIH-- 91 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC----------CBCHHHHHHHHHHT-TCCCE--
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc----------CCCHHHHHHHHHHc-CcChh--
Confidence 56999999999999998877663211 11355666666653 55789999999976 53210
Q ss_pred CcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEE
Q psy1705 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265 (309)
Q Consensus 186 yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~i 265 (309)
+. .+. .+.+++++.+.++-||.+...- ++.. .+....+||++|
T Consensus 92 ------------------~~----nr~--ls~neV~~~i~~Nk~I~v~~~~-----------v~e~--~~~~~~gHA~av 134 (183)
T 1pxv_A 92 ------------------YQ----EGV--PSYNQVDQLTKDNVGIMILAQS-----------VSQN--PNDPHLGHALAV 134 (183)
T ss_dssp ------------------EE----ESC--CCHHHHHHHHHTTCCEEEEEEC-----------CCSS--TTSCCCEEEEEE
T ss_pred ------------------Hh----cCC--CCHHHHHHHHhcCCcEEEEccc-----------cccC--CCCccCceeEEE
Confidence 00 112 2789999999999999988763 2222 223468999999
Q ss_pred EEe----CCCEEEEEcCCCCCCCCCceEEEEec
Q psy1705 266 VGY----TRNSWILKNWWSHHWGDNGYMYLKRG 294 (309)
Q Consensus 266 VGy----g~~ywivkNSWG~~WG~~Gy~~i~~~ 294 (309)
||| +.++.+|=|=|- +|++-++..
T Consensus 135 ~Gya~~~~~~~y~~WNPW~-----~~~~~~~a~ 162 (183)
T 1pxv_A 135 VGNAKINDQEKLIYWNPWD-----TELSIQDAD 162 (183)
T ss_dssp EEEEEETTEEEEEEECTTC-----SSCEEEETT
T ss_pred EeeeecCCCeEEEEeCCcc-----CCcEeecCC
Confidence 999 778999999883 477776654
No 47
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.87 E-value=0.00029 Score=56.79 Aligned_cols=124 Identities=19% Similarity=0.204 Sum_probs=87.4
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHH--------cCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCC
Q psy1705 114 WNQEDCGACYAFSIASAIQGQIFKS--------TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185 (309)
Q Consensus 114 ~dQg~cgsCwAfa~~~~~e~~~~~~--------~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~ 185 (309)
..||.-+-|-+|+.+++|.+..... +.....+|+++|..+ |..+...++|++.. |--.
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~----------~~t~~e~iky~~s~-g~~~--- 81 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT----------GLTPREMIYFGQTQ-GRSP--- 81 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC----------CCCHHHHHHHHHHT-TCCC---
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc----------CCCHHHHHHHHHHc-CCCh---
Confidence 5699999999999999988776321 122568999999954 34688999999887 4311
Q ss_pred CcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEE
Q psy1705 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265 (309)
Q Consensus 186 yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~i 265 (309)
.+. ... .+.+++++.+.++-|+.+..+-. + . .+....+|||+|
T Consensus 82 -------------------~~~--n~~--ls~~eV~~~~~~nk~i~i~~~~v-e-----------~--~~~~~~gHAlav 124 (174)
T 1cv8_A 82 -------------------QLL--NRM--TTYNEVDNLTKNNKGIAILGSRV-E-----------S--RNGMHAGHAMAV 124 (174)
T ss_dssp -------------------EEE--SSC--CCHHHHHHHHHTTCCEEEEEEES-S-----------C--BTTBCCEEEEEE
T ss_pred -------------------hhh--cCC--CCHHHHHHHHhcCCceEEEcccc-c-----------C--CCCCCCceeEEE
Confidence 000 011 26789999999999999887632 1 1 112467999999
Q ss_pred EEe-----CCCEEEEEcCCCCCCCCCceEEEEe
Q psy1705 266 VGY-----TRNSWILKNWWSHHWGDNGYMYLKR 293 (309)
Q Consensus 266 VGy-----g~~ywivkNSWG~~WG~~Gy~~i~~ 293 (309)
||| |.+|.++=|=| +++.+-++-
T Consensus 125 ~Gy~~~~ng~~~y~~WNPW-----~~~~~~~s~ 152 (174)
T 1cv8_A 125 VGNAKLNNGQEVIIIWNPW-----DNGFMTQDA 152 (174)
T ss_dssp EEEEEETTSCEEEEEECTT-----CSSCEEEET
T ss_pred EeeeeecCCceEEEEeCCc-----cCCcEEecC
Confidence 999 78899999988 345554443
No 48
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.77 E-value=0.00029 Score=62.82 Aligned_cols=125 Identities=17% Similarity=0.162 Sum_probs=85.9
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHH--------cCCCCcCCHHHHHhhcCCCCCCCCCCCchHHHHHHHHHhCCCCCCCC
Q psy1705 114 WNQEDCGACYAFSIASAIQGQIFKS--------TSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEED 185 (309)
Q Consensus 114 ~dQg~cgsCwAfa~~~~~e~~~~~~--------~~~~~~lS~q~l~dc~~~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~ 185 (309)
..||.-+-|-+||.+++|.+..... +.....+|+++|.+ .|..+...++|++.. |.-
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~----------ts~~~~q~Iky~qsy-G~~---- 265 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN----------CATFPNQMIEYGKSQ-GRD---- 265 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGG----------CCCCHHHHHHHHHHT-TEE----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh----------cCCCHHHHHHHHHHh-Ccc----
Confidence 5699999999999999887654211 11134566666665 355789999999966 432
Q ss_pred CcCCCCCCccCCCCCCceEEeceeEEcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEE
Q psy1705 186 YPYKGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLL 265 (309)
Q Consensus 186 yPY~~~~~~c~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~i 265 (309)
+.-....+ +.+.+++.+..+-||.|.++...+. .+....+|||+|
T Consensus 266 --------------------~~~~n~~l--s~deVk~~id~Nk~I~v~~~~v~~~-------------~n~~~~gHAlav 310 (367)
T 1x9y_A 266 --------------------IHYQEGVP--SYNQVDQLTKDNVGIMILAQSVSQN-------------PNDPHLGHALAV 310 (367)
T ss_dssp --------------------EEEEESCC--CHHHHHHHHHTTCCEEEEEEETTSC-------------SSSCCCSEEEEE
T ss_pred --------------------hhhhcCCC--CHHHHHHHHhcCCcEEEEccccccC-------------CCCccCceeEEE
Confidence 21112222 7889999999999999998754111 123468999999
Q ss_pred EEe----CCCEEEEEcCCCCCCCCCceEEEEe
Q psy1705 266 VGY----TRNSWILKNWWSHHWGDNGYMYLKR 293 (309)
Q Consensus 266 VGy----g~~ywivkNSWG~~WG~~Gy~~i~~ 293 (309)
||| +.+|.++=|=|- ++++-++.
T Consensus 311 vGyA~~~~~~~y~~WNPW~-----~~~~~~sa 337 (367)
T 1x9y_A 311 VGNAKINDQEKLIYWNPWD-----TELSIQDA 337 (367)
T ss_dssp EEEEEETTEEEEEEECTTC-----SSCEEEET
T ss_pred EeccccCCCcEEEEecCcc-----CCceeecC
Confidence 999 678999988883 34655554
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=93.03 E-value=0.29 Score=41.86 Aligned_cols=67 Identities=18% Similarity=0.333 Sum_probs=42.2
Q ss_pred EcCCCCHHHHHHHHhcCCCEEEEEEeCChhhhccCCc---eecCCCCC--CCCCCeEEEEEEeCCCEEEEEcCCC
Q psy1705 211 VLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASG---IYDDEACT--SDYVNHAMLLVGYTRNSWILKNWWS 280 (309)
Q Consensus 211 ~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~G---i~~~~~~~--~~~~~Hav~iVGyg~~ywivkNSWG 280 (309)
.++..+.++|++.|.++.||.|..... |.....+ .+..+... -....|+|+|+||..+..+|-+.+.
T Consensus 126 dltG~sl~~L~~~I~~G~PVIv~~t~~---~~p~~~~~~~~W~~~~G~~~~~~~~H~VVl~GYd~~~vyi~DP~~ 197 (236)
T 3erv_A 126 DLTGKSIEELYKSVKAGQPVVIITNAT---FAPLDEDEFTTWETNNGDVSITYNEHCVVLIGYDQESVYIRDPLK 197 (236)
T ss_dssp ECTTSCHHHHHHHHHTTCCEEEEEETT---SSCCCGGGCEEEEETTEEEEECTTEEEEEEEEECSSEEEEECTTS
T ss_pred ecCCCCHHHHHHHHHCCCeEEEEEeCC---cccccccccceeecCCCceeeccCCeEEEEEEEeCCEEEEECCCC
Confidence 455558999999999988999987642 3221100 11111110 1246899999999666777777654
No 50
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=75.06 E-value=6.8 Score=34.88 Aligned_cols=59 Identities=15% Similarity=0.216 Sum_probs=41.5
Q ss_pred HHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe-CCCEEEEEcCCCCCCCCCceEEEEe
Q psy1705 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-TRNSWILKNWWSHHWGDNGYMYLKR 293 (309)
Q Consensus 218 ~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy-g~~ywivkNSWG~~WG~~Gy~~i~~ 293 (309)
+.|++.|.++.||.+.-.- ... . ...++||.+|=|| ..+||=|==.||-. .+||+.+.-
T Consensus 239 ~~i~~eL~~~rPV~~~G~~--~~~------~-------~~~~GHafV~DGY~~~~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVS--PGS------M-------GQDAGHAFVIDGYNKAGLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC----------------------CCCEEEEEEEECTTSCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEec--CCC------C-------CCCCceEEEEccccCCCeEEEecCCCCC--CCceEeccC
Confidence 5789999999998765421 111 1 1357999999999 67788887777733 489999875
No 51
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=74.12 E-value=8.6 Score=34.94 Aligned_cols=55 Identities=20% Similarity=0.309 Sum_probs=42.0
Q ss_pred HHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe-CCCEEEEEcCCCCCCCCCceEEEEe
Q psy1705 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-TRNSWILKNWWSHHWGDNGYMYLKR 293 (309)
Q Consensus 217 ~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy-g~~ywivkNSWG~~WG~~Gy~~i~~ 293 (309)
.+.|+..|.++.||.+.-. . ..++||.+|=|| +.+||=|==.||-. .+|||.+.-
T Consensus 289 ~~~i~~eL~~~rPV~~~G~-~-------------------~~gGHAfV~DGy~~~~~~H~NwGWgG~--~nGyy~l~~ 344 (371)
T 1dki_A 289 EAQIDKELSQNQPVYYQGV-G-------------------KVGGHAFVIDGADGRNFYHVNWGWGGV--SDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHHTTCCEEEEEE-E-------------------TTEEEEEEEEEECSSSEEEEECSSTTT--TCEEEESCC
T ss_pred HHHHHHHHHcCCCEEEEee-c-------------------CCCceEEEECcccCCCeEEEEeCcCCC--CCcceeccC
Confidence 3578899999999976432 1 127999999999 77788777677743 699999875
No 52
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=66.92 E-value=12 Score=32.20 Aligned_cols=55 Identities=20% Similarity=0.309 Sum_probs=42.6
Q ss_pred HHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe-CCCEEEEEcCCCCCCCCCceEEEEe
Q psy1705 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-TRNSWILKNWWSHHWGDNGYMYLKR 293 (309)
Q Consensus 217 ~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy-g~~ywivkNSWG~~WG~~Gy~~i~~ 293 (309)
.+.|++.|.++.||.+.-.- ..++||.+|=|| ..+|+-|==.||-. .+|||.+.-
T Consensus 171 ~~~I~~eL~~grPV~~~G~~--------------------~~gGHAwViDGY~~~~~~H~NwGWgG~--~nGYy~l~~ 226 (261)
T 4d8b_A 171 EAQIDKELSQNQPVYYQGVG--------------------KVGGHAFVIDGADGRNFYHVNWGWGGV--SDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHHTTCCEEEEEEE--------------------TTEEEEEEEEEEESSSCEEEECSSTTT--TCEEECTTC
T ss_pred HHHHHHHHHcCCCEEEEeec--------------------CCCceEEEEcccccCCEEEEEcCCCCC--CCceeeccc
Confidence 36799999999999876521 147999999999 67887776666622 689999876
No 53
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=58.74 E-value=19 Score=32.08 Aligned_cols=58 Identities=17% Similarity=0.116 Sum_probs=34.4
Q ss_pred HHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe--------CCCEEEEEcCCCC
Q psy1705 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSH 281 (309)
Q Consensus 217 ~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy--------g~~ywivkNSWG~ 281 (309)
-+.|++++.++.+++.++.+. .. +......-.+-..+||-.|++. +...-.|||-||.
T Consensus 210 ~~~l~~~~~~g~l~~~s~~~t-~~------~~~~~~~~~GLv~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 275 (339)
T 2r9f_A 210 YQIILKALERGSLLGCSINIS-DI------RDLEAITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGE 275 (339)
T ss_dssp HHHHHHHHHHTCEEEEECCCS-SS------STTCSBCTTSCBTTCCEEEEEEEEEEETTEEEEEEEEECTTSC
T ss_pred HHHHHHHHHCCCeEEEEecCC-Cc------cchhhhhccCCcCCceEEEeEEEEEecCCCceEEEEEeCCCCC
Confidence 356778887755655554332 11 1001011123457899999998 1357889999996
No 54
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=51.67 E-value=30 Score=30.66 Aligned_cols=57 Identities=16% Similarity=0.194 Sum_probs=33.7
Q ss_pred HHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe------C--CCEEEEEcCCCC
Q psy1705 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY------T--RNSWILKNWWSH 281 (309)
Q Consensus 218 ~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy------g--~~ywivkNSWG~ 281 (309)
+.|++++..+.+|+.++... .. +......-.+-..+||-.|++. | ...-.|||-||.
T Consensus 206 ~~l~~~~~~g~l~~~~~~~~-~~------~~~~~~~~~GLv~~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~ 270 (326)
T 2nqa_A 206 QIIRKALCAGSLLGCSIDVY-SA------AEAEAITSQKLVKSHAYSVTGVEEVNFQGHPEKLIRLRNPWGE 270 (326)
T ss_dssp HHHHHHHHTTCEEEEECCCS-SG------GGTTCBCTTSCBSSCCEEEEEEEEEEETTEEEEEEEEECTTCC
T ss_pred HHHHHHHhCCCceEEeecCC-Cc------ccchhhhccCCccCceEEEEEEEEEecCCCceEEEEecCCCcC
Confidence 56778887655555554332 11 1101111123457899999998 1 356889999995
No 55
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=45.20 E-value=41 Score=29.93 Aligned_cols=58 Identities=14% Similarity=0.123 Sum_probs=34.3
Q ss_pred HHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe--------CCCEEEEEcCCCC
Q psy1705 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--------TRNSWILKNWWSH 281 (309)
Q Consensus 217 ~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy--------g~~ywivkNSWG~ 281 (309)
-+.|++++..+.+++.+..+. .. +-.....-.+-..+||-.|++. +...-.|||-||.
T Consensus 209 ~~~l~~~~~~g~l~~~~~~~t-~~------~~~e~~~~~GLv~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 274 (339)
T 1ziv_A 209 YEILEKALKRGSLLGCFIDTR-SA------AESEARTPFGLIKGHAYSVTGIDQVSFRGQRIELIRIRNPWGQ 274 (339)
T ss_dssp HHHHHHHHHHTCEEEEECCCS-SG------GGTTCBCTTSCBTTCCEEEEEEEEEEETTEEEEEEEEECCSSC
T ss_pred HHHHHHHHhCCCeEEEEeccC-Cc------cchhhhhccCcccCeeEEEeEEEEEecCCCceEEEEecCCCCC
Confidence 367778887755555544322 11 1000011123457899999988 2457889999996
No 56
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=34.05 E-value=66 Score=31.65 Aligned_cols=58 Identities=14% Similarity=0.158 Sum_probs=32.9
Q ss_pred HHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe------C--CCEEEEEcCCCC
Q psy1705 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY------T--RNSWILKNWWSH 281 (309)
Q Consensus 217 ~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy------g--~~ywivkNSWG~ 281 (309)
-+.|++++..+.++++++.+. +. +-.....-.+-..+||-.|++. | ...-.|||-||.
T Consensus 225 ~~~l~~~~~~g~l~~~~~~~~-~~------~~~~~~~~~GL~~~HaYsvl~~~~v~~~~~~~~lv~lrNPWg~ 290 (714)
T 3bow_A 225 FKIIQKALEKGSLLGCSIDIT-SA------ADSEAVTYQKLVKGHAYSVTGAEEVESSGSLQKLIRIRNPWGQ 290 (714)
T ss_dssp HHHHHHHHHTTCEEEEECCST-TS------CTTCCBCTTSCBTTSCEEEEEEEEEEETTEEEEEEEEECTTSC
T ss_pred HHHHHHHHhCCCeEEEEcccC-Cc------ccccchhcCCCcCCceEEEeeeEEeecCCCceEEEEEECCCCC
Confidence 356777787655555544322 10 1000011113457899999988 2 345679999995
No 57
>1sgh_B Ezrin-radixin-moesin binding phosphoprotein 50; FERM-peptide complex, structural protein; 3.50A {Homo sapiens} SCOP: j.117.1.1
Probab=27.70 E-value=72 Score=18.64 Aligned_cols=32 Identities=13% Similarity=-0.087 Sum_probs=19.5
Q ss_pred CChHHHHHHHHHHHHHhCCccCChhhhHHHHHHHH
Q psy1705 1 MTNKEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQ 35 (309)
Q Consensus 1 ~~~~~~~~~F~~~~~~y~K~Y~~~~e~~~R~~iF~ 35 (309)
||-+|+.... .+++..+=...-.-.+++++|.
T Consensus 6 mtaAeakek~---~~Kr~~KrapqMDw~KK~Eifs 37 (39)
T 1sgh_B 6 ISLAMAKERA---HQKRSSKRAPQMDWSKKNELFS 37 (39)
T ss_pred ccHHHHHHHH---HhhcccccCCcccHHHHHHHHh
Confidence 6777777666 5555433333446677888875
No 58
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=26.41 E-value=30 Score=23.48 Aligned_cols=27 Identities=7% Similarity=0.021 Sum_probs=20.5
Q ss_pred CCcccCCCCCcchHHHHHHHHHHHHHHHH
Q psy1705 110 ITPDWNQEDCGACYAFSIASAIQGQIFKS 138 (309)
Q Consensus 110 v~pV~dQg~cgsCwAfa~~~~~e~~~~~~ 138 (309)
+--|+=||.|++| ......+|..+...
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~~ 63 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLREK 63 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHHH
Confidence 4568999999999 34556888888754
No 59
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=20.09 E-value=80 Score=31.88 Aligned_cols=58 Identities=17% Similarity=0.111 Sum_probs=31.0
Q ss_pred HHHHHHHHhcCCCEEEEEEeCChhhhccCCceecCCCCCCCCCCeEEEEEEe------C--CCEEEEEcCCCC
Q psy1705 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY------T--RNSWILKNWWSH 281 (309)
Q Consensus 217 ~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~~~Hav~iVGy------g--~~ywivkNSWG~ 281 (309)
-+.|++++..+.+|++++.+. .. +-.....-.+-..+||-.|++. | ...-.|||-||.
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~gl~~~haY~v~~~~~~~~~~~~~~lv~lrNPwg~ 290 (900)
T 1qxp_A 225 YQIILKALERGSLLGCSINIS-DI------RDLEAITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGE 290 (900)
T ss_dssp HHHHHHHHTTTCEEEEECCC----------------CCCCC---CCCEEEEEEECCCSSSCCEEEEEECTTCC
T ss_pred HHHHHHHHhCCCEEEEEecCC-Cc------cccchhhcCCCCCCceEEEeEEEEEecCCCceEEEEEeCCCCC
Confidence 466778887655665554322 11 1011111123457899999998 2 356889999995
Done!