RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1705
(309 letters)
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 188 bits (478), Expect = 1e-58
Identities = 108/307 (35%), Positives = 163/307 (53%), Gaps = 15/307 (4%)
Query: 15 KKYKKDYRKKATDSKKKLH---WQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYI 71
K+K + + +++ W+ N K I HNQE ++G H +T+ N D+ +
Sbjct: 13 TKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFR 72
Query: 72 KEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAI 131
+ M + + R+ V P +DWREKG++TP NQ CG+C+AFS A+
Sbjct: 73 QVMNGFQNRKPRKGKVFQEPLFYE--APRSVDWREKGYVTPVKNQGQCGSCWAFSATGAL 130
Query: 132 QGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGK 191
+GQ+F+ T + LS Q +VDCS GN GC GG + YVQ GGL EE YPY+
Sbjct: 131 EGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEAT 190
Query: 192 QSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDD 251
+ CK+ V + + + P+ E AL +ATVGPI+V+I+A +F Y GIY +
Sbjct: 191 EESCKYNPKYSVANDAGFVD-IPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFE 249
Query: 252 EACTSDYVNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYLKRG-NNRCGIAN 302
C+S+ ++H +L+VGY S W++KN W WG GY+ + + N CGIA+
Sbjct: 250 PDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIAS 309
Query: 303 YAVYALI 309
A Y +
Sbjct: 310 AASYPTV 316
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 163 bits (414), Expect = 3e-50
Identities = 76/215 (35%), Positives = 111/215 (51%), Gaps = 7/215 (3%)
Query: 99 PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
P DWR KG +T +Q CG+C+AFS+ ++GQ F + + LS Q+++DC +
Sbjct: 2 PPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM-- 59
Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
+ C GG N + ++ GGL E+DY Y+G C+F V I Q+E
Sbjct: 60 DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVE-LSQNEQ 118
Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WI 274
L LA GPI+V+INA F + C+ ++HA+LLVGY + S W
Sbjct: 119 KLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQRSDVPFWA 178
Query: 275 LKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
+KN W WG+ GY YL RG+ CG+ A A++
Sbjct: 179 IKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 157 bits (398), Expect = 8e-48
Identities = 93/221 (42%), Positives = 134/221 (60%), Gaps = 9/221 (4%)
Query: 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
+P +DWR+KG++TP NQ+ CG+C+AFS A++GQ+F+ T ++ LS Q +VDCS
Sbjct: 1 LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQ 60
Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
GN GC GG + YV+ GGL EE YPY ICK++ N V + ++V+ P E
Sbjct: 61 GNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVAQDTGFTVVAPGKE 120
Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----- 272
AL +ATVGPI+V+++A +FQ Y SGIY + C+S ++H +L+VGY
Sbjct: 121 KALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSDN 180
Query: 273 ---WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
W++KN W WG NGY+ + + NN CGIA A Y +
Sbjct: 181 SKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 221
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 154 bits (389), Expect = 1e-46
Identities = 89/216 (41%), Positives = 130/216 (60%), Gaps = 7/216 (3%)
Query: 99 PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
PD +D+R+KG++TP NQ CG+C+AFS A++GQ+ K T ++ LS Q +VDC +
Sbjct: 2 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 61
Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
C GG + N YVQ G+ E+ YPY G++ C + + +P +E
Sbjct: 62 G--CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEK 119
Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WI 274
ALK +A VGP++V+I+AS +FQ Y+ G+Y DE+C SD +NHA+L VGY WI
Sbjct: 120 ALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWI 179
Query: 275 LKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
+KN W +WG+ GY+ + R NN CGIAN A + +
Sbjct: 180 IKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 153 bits (387), Expect = 2e-46
Identities = 73/211 (34%), Positives = 108/211 (51%), Gaps = 9/211 (4%)
Query: 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
+P+ +DWR+KG +TP NQ CG+C+AFS S ++ T + LS Q++VDC +
Sbjct: 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKN 60
Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
GC GG+ Y+ GG+ + +YPYK Q C+ + +D + P
Sbjct: 61 H--GCLGGAFVFAYQYIINNGGIDTQANYPYKAVQGPCQAASKVVSIDGYNG---VPFCN 115
Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKN 277
V P V+I+AS FQ Y+SGI+ T +NH + +VGY N WI++N
Sbjct: 116 EXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTK--LNHGVTIVGYQANYWIVRN 173
Query: 278 WWSHHWGDNGYMYLKR--GNNRCGIANYAVY 306
W +WG+ GY+ + R G CGIA Y
Sbjct: 174 SWGRYWGEKGYIRMLRVGGCGLCGIARLPYY 204
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 153 bits (386), Expect = 6e-46
Identities = 81/223 (36%), Positives = 122/223 (54%), Gaps = 8/223 (3%)
Query: 93 NESVLIPDHLDWREKG-FITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVV 151
N S P +DWR+KG F++P NQ CG+C+ FS A++ + +T ++ L+ QQ+V
Sbjct: 4 NCSATYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLV 63
Query: 152 DCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSV 211
DC+ N GC GG Y+++ G+M E+ YPYKG+ CKF+ + + +
Sbjct: 64 DCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVAN 123
Query: 212 LPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEAC--TSDYVNHAMLLVGYT 269
+ DE A+ +A P++ + + F +Y GIY +C T D VNHA+L VGY
Sbjct: 124 ITMNDEEAMVEAVALYNPVSFAFEV-TNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYG 182
Query: 270 RNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308
+ WI+KN W WG NGY ++RG N CG+A A Y +
Sbjct: 183 EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 225
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 152 bits (383), Expect = 1e-45
Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 7/218 (3%)
Query: 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
+PD +DWREKG +T Q CGAC+AFS A++ Q+ T ++ LS Q +VDCS
Sbjct: 1 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK 60
Query: 158 G-NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQD 216
N GC GG + Y+ G+ + YPYK C++ S ++ LP
Sbjct: 61 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGR 120
Query: 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS---- 272
E LK +A GP++V ++A +F LY SG+Y + +C + VNH +L+VGY +
Sbjct: 121 EDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC-TQNVNHGVLVVGYGDLNGKEY 179
Query: 273 WILKNWWSHHWGDNGYMYLKRG-NNRCGIANYAVYALI 309
W++KN W H++G+ GY+ + R N CGIA++ Y I
Sbjct: 180 WLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 217
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 146 bits (368), Expect = 2e-43
Identities = 78/217 (35%), Positives = 121/217 (55%), Gaps = 13/217 (5%)
Query: 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
+PD +DWRE G + P NQ CG+C+AFS +A++G T ++ LS QQ+VDC+
Sbjct: 1 LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA- 59
Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
N GC GG + ++ GG+ EE YPY+G+ IC VV I S+ +P +E
Sbjct: 60 -NHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICNSTVNAPVVSIDSYENVPSHNE 118
Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY----TRNSW 273
+ P++V+++A+ FQLY SGI+ + NHA+ +VGY ++ W
Sbjct: 119 QS-LQKAVANQPVSVTMDAAGRDFQLYRSGIFTG--SCNISANHALTVVGYGTENDKDFW 175
Query: 274 ILKNWWSHHWGDNGYMYLKRG----NNRCGIANYAVY 306
I+KN W +WG++GY+ +R + +CGI +A Y
Sbjct: 176 IVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASY 212
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 144 bits (363), Expect = 1e-42
Identities = 72/216 (33%), Positives = 104/216 (48%), Gaps = 13/216 (6%)
Query: 99 PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
P +DWR KG +TP NQ CG+C+AFS + ++G T + ELS Q++VDC S
Sbjct: 2 PQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSY 61
Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDEH 218
GC GG +L YV G + + +P V I+ + +P E
Sbjct: 62 --GCKGGYQTTSLQYVANNGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCET 119
Query: 219 ALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WI 274
+ LA P++V + A FQLY SG++D T ++HA+ VGY + I
Sbjct: 120 SFLGALAN-QPLSVLVEAGGKPFQLYKSGVFDGPCGTK--LDHAVTAVGYGTSDGKNYII 176
Query: 275 LKNWWSHHWGDNGYMYLKRG----NNRCGIANYAVY 306
+KN W +WG+ GYM LKR CG+ + Y
Sbjct: 177 IKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYY 212
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 141 bits (355), Expect = 2e-41
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 9/216 (4%)
Query: 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
+P ++DWR G + +Q +CG C+AFS + ++G T + LS Q+++DC
Sbjct: 1 LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQ 60
Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
GC GG + + ++ GG+ EE+YPY + C N P +
Sbjct: 61 NTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNN 120
Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----W 273
T T P++V+++A+ F+ Y+SGI+ T+ ++HA+ +VGY W
Sbjct: 121 EWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTA--IDHAVTIVGYGTEGGIDYW 178
Query: 274 ILKNWWSHHWGDNGYMYLKR---GNNRCGIANYAVY 306
I+KN W WG+ GYM + R G CGIA Y
Sbjct: 179 IVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSY 214
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 139 bits (350), Expect = 1e-40
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
+P +DWR+KG +T +Q CG+C+AFS A++G T+++ LS Q++VDC
Sbjct: 2 VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQ 61
Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
GC GG + +++ GG+ E +YPY+ C + N P+++
Sbjct: 62 NQ-GCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPEND 120
Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----- 272
+ P++V+I+A FQ Y+ G++ ++H + +VGY
Sbjct: 121 ENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG--SCGTELDHGVAIVGYGTTIDGTKY 178
Query: 273 WILKNWWSHHWGDNGYMYLKRG----NNRCGIANYAVY 306
W +KN W WG+ GY+ ++RG CGIA A Y
Sbjct: 179 WTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASY 216
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 135 bits (340), Expect = 3e-39
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 9/216 (4%)
Query: 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
IP+++DWR+KG +TP NQ CG+C+AFS I+G I T + E S Q+++DC S
Sbjct: 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRRS 60
Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
G + + G+ YPY+G Q C+ + +
Sbjct: 61 ---YGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYN 117
Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNSWILKN 277
+ P++V + A+ FQLY GI+ + V+HA+ VGY N ++KN
Sbjct: 118 EGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVG--PCGNKVDHAVAAVGYGPNYILIKN 175
Query: 278 WWSHHWGDNGYMYLKRGNNR----CGIANYAVYALI 309
W WG+NGY+ +KRG CG+ + Y +
Sbjct: 176 SWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 135 bits (339), Expect = 4e-39
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 10/217 (4%)
Query: 99 PDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISG 158
P +DWR +G +T +Q CG+C+AFS ++ Q F + + LS Q +V C
Sbjct: 2 PAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDS 61
Query: 159 NLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKF--KRPNIVVDISSWSVLPPQD 216
+ + G + E+ YPY + I + V + V PQD
Sbjct: 62 GCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQD 121
Query: 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS---- 272
E + LA GP+AV+++AS +C S+ ++H +LLVGY ++
Sbjct: 122 EAQIAAWLAVNGPVAVAVDASSWMTYTG----GVMTSCVSEQLDHGVLLVGYNDSAAVPY 177
Query: 273 WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYALI 309
WI+KN W+ WG+ GY+ + +G+N+C + A A++
Sbjct: 178 WIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 134 bits (338), Expect = 6e-39
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 13/217 (5%)
Query: 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
+P+++DWR+KG +TP +Q CG+C+AFS + ++G T ++ ELS Q++VDC S
Sbjct: 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRS 60
Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
G G+ YPYK KQ C+ K+ + +S +
Sbjct: 61 ---HGCKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNN 117
Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----W 273
+ P++V + + FQLY GI++ T V+HA+ VGY ++
Sbjct: 118 EGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTK--VDHAVTAVGYGKSGGKGYI 175
Query: 274 ILKNWWSHHWGDNGYMYLKRG----NNRCGIANYAVY 306
++KN W WG+ GY+ +KR CG+ + Y
Sbjct: 176 LIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYY 212
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 134 bits (337), Expect = 2e-38
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 97 LIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSII 156
DWR +TP +Q++CG+C+AFS +++ Q +++ LS Q++VDCS
Sbjct: 17 FDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFK 76
Query: 157 SGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQD 216
+ GC GG + N + GG+ + DYPY + P +
Sbjct: 77 NY--GCNGGLINNAFEDMIELGGICPDGDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPDN 134
Query: 217 EHALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY-------- 268
+ K L +GPI++S+ S F Y GI+D D +NHA++LVG+
Sbjct: 135 KL--KEALRFLGPISISVAVSD-DFAFYKEGIFDG--ECGDQLNHAVMLVGFGMKEIVNP 189
Query: 269 ------TRNSWILKNWWSHHWGDNGYMYLKRGN----NRCGIANYAVYALI 309
+I+KN W WG+ G++ ++ +CG+ A LI
Sbjct: 190 LTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 133 bits (336), Expect = 3e-38
Identities = 53/252 (21%), Positives = 88/252 (34%), Gaps = 43/252 (17%)
Query: 98 IPDHLDWREK----GFITPDWNQEDCGACYAFSIASAIQGQIFKST--SEIEELSIQQVV 151
+P D RE+ I +Q CG+C+AF AI +I T E+S + ++
Sbjct: 2 LPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLL 61
Query: 152 DCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSI----CKFKRPNIVVDIS 207
C GC GG N+ G + + G + C+ +
Sbjct: 62 TCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCT 121
Query: 208 SWSVLP---------------------------PQDEHALKVTLATVGPIAVSINASPHT 240
P E + + GP+ + +
Sbjct: 122 GEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYS-D 180
Query: 241 FQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNN 296
F LY SG+Y HA+ ++G+ + W++ N W+ WGDNG+ + RG +
Sbjct: 181 FLLYKSGVYQHV-TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQD 239
Query: 297 RCGIANYAVYAL 308
CGI + V +
Sbjct: 240 HCGIESEVVAGI 251
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 130 bits (327), Expect = 2e-37
Identities = 70/215 (32%), Positives = 117/215 (54%), Gaps = 10/215 (4%)
Query: 98 IPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIIS 157
+P +DWR KG + NQ+ CG+C+AFS +A++ T ++ LS Q++VDC +
Sbjct: 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD--T 58
Query: 158 GNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSWSVLPPQDE 217
+ GC GG + N Y+ GG+ +++YPY Q CK R VV I+ + + +E
Sbjct: 59 ASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQGSCKPYRLR-VVSINGFQRVTRNNE 117
Query: 218 HALKVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGY--TRNSWIL 275
AL+ +A+ P++V++ A+ FQ Y+SGI+ T+ ++ G +N WI+
Sbjct: 118 SALQSAVASQ-PVSVTVEAAGAPFQHYSSGIFTGPCGTAQNHGVVIVGYGTQSGKNYWIV 176
Query: 276 KNWWSHHWGDNGYMYLKRG----NNRCGIANYAVY 306
+N W +WG+ GY++++R CGIA Y
Sbjct: 177 RNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSY 211
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 129 bits (325), Expect = 7e-37
Identities = 72/231 (31%), Positives = 103/231 (44%), Gaps = 23/231 (9%)
Query: 98 IPDHLDWREK---GFITPDWNQEDCGACYAFSIASAIQGQ--IFKSTSEIEELSIQQVVD 152
+P DWR F++P NQ CG+CY+F+ ++ + I + S+ LS Q+VV
Sbjct: 1 LPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVS 60
Query: 153 CSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPYKGKQSICKFKRPNIVVDISSW--- 209
CS + C GG GL++E +PY G S CK K S +
Sbjct: 61 CSQYAQG--CEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYV 118
Query: 210 -SVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGIYDDE-----ACTSDYVNHAM 263
+E +K+ L GP+AV+ GIY + NHA+
Sbjct: 119 GGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYK-KGIYHHTGLRDPFNPFELTNHAV 177
Query: 264 LLVGYTRNS------WILKNWWSHHWGDNGYMYLKRGNNRCGIANYAVYAL 308
LLVGY +S WI+KN W WG+NGY ++RG + C I + AV A
Sbjct: 178 LLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAAT 228
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 130 bits (328), Expect = 2e-36
Identities = 63/306 (20%), Positives = 113/306 (36%), Gaps = 25/306 (8%)
Query: 14 QKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKE 73
+K + K Y + + ++ + K + ++ NHLSDL +
Sbjct: 9 KKAFNKSYATFEDEEAARKNFLESVKYVQSNG-----------GAINHLSDLSLDEFKNR 57
Query: 74 MTRLTHSRIRRTLVRSPESNESVL-----IPDHLDWREKGFITPDWNQEDCGACYAFSIA 128
+ + + P +D R+ +TP Q CG+ +AFS
Sbjct: 58 FLMSAEAFEHLKTQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGV 117
Query: 129 SAIQGQIFKSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGGLMKEEDYPY 188
+A + + +L+ Q++VDC+ G C G ++ + Y+Q G+++E Y Y
Sbjct: 118 AATESAYLAYRDQSLDLAEQELVDCASQHG---CHGDTIPRGIEYIQH-NGVVQESYYRY 173
Query: 189 KGKQSICKFKRPNIVVDISSWSVLPPQDEHALKVTLATVGPIAVSINASPHTFQLYASGI 248
++ C+ + + PP + T IAV I + G
Sbjct: 174 VAREQSCRRPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGR 233
Query: 249 -YDDEACTSDYVNHAMLLVGYTRNS----WILKNWWSHHWGDNGYMYLKRGNNRCGIANY 303
HA+ +VGY+ WI++N W +WGDNGY Y + I Y
Sbjct: 234 TIIQRDNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEY 293
Query: 304 AVYALI 309
++
Sbjct: 294 PYVVIL 299
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 107 bits (266), Expect = 6e-28
Identities = 52/276 (18%), Positives = 88/276 (31%), Gaps = 44/276 (15%)
Query: 69 HYIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKG---FITPDWNQED---CGAC 122
Y R T R E +P DWR + + NQ CG+C
Sbjct: 5 CYRPLRGDGLAPLGRTTYPRPHEYLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSC 64
Query: 123 YAFSIASAIQGQIF---KSTSEIEELSIQQVVDCSIISGNLGCAGGSLRNTLNYVQFAGG 179
+A + SA+ +I K LS+Q V+DC N G G ++ G
Sbjct: 65 WAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCG----NAGSCEGGNDLSVWDYAHQHG 120
Query: 180 LMKEEDYPYKGKQSICKFKRPN---------------IVVDISSWSVLPPQDEHALKVTL 224
+ E Y+ K C + + + L + +
Sbjct: 121 IPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEI 178
Query: 225 ATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHAMLLVGYTRNS----WILKNWWS 280
GPI+ I +G E + Y+NH + + G+ + WI++N W
Sbjct: 179 YANGPISCGIM--ATERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWG 236
Query: 281 HHWGDNGYMYLKRGNNR--------CGIANYAVYAL 308
WG+ G++ + + I + +
Sbjct: 237 EPWGERGWLRIVTSTYKDGKGARYNLAIEEHCTFGD 272
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 39.2 bits (91), Expect = 4e-04
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 7/39 (17%)
Query: 260 NHAMLLVGYTRNS-------WILKNWWSHHWGDNGYMYL 291
HAML+ G + + ++N W G +G +
Sbjct: 373 THAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVM 411
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 36.0 bits (83), Expect = 0.005
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 8/41 (19%)
Query: 259 VNHAMLLVGYTRNS--------WILKNWWSHHWGDNGYMYL 291
+ HAM + W ++N W G GY+ +
Sbjct: 369 MTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCM 409
>d1mjca_ b.40.4.5 (A:) Major cold shock protein {Escherichia coli
[TaxId: 562]}
Length = 69
Score = 27.4 bits (61), Expect = 0.51
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 108 GFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLG 161
GFITPD +D F SAIQ +KS L Q V +I SG G
Sbjct: 18 GFITPDDGSKDV-----FVHFSAIQNDGYKS------LDEGQKVSFTIESGAKG 60
>d2au5a1 a.244.1.1 (A:1-132) Hypothetical protein EF2947
{Enterococcus faecalis [TaxId: 1351]}
Length = 132
Score = 26.6 bits (58), Expect = 2.4
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 112 PDWNQEDCGACYAFSIASAIQGQIFKSTSEI 142
P+W +E G + S ++ + F S ++
Sbjct: 52 PNWLEEAAGGMQGVIVQSLLEDENFSSVEQL 82
>d1cmxa_ d.3.1.6 (A:) Ubiquitin carboxyl-terminal hydrolase UCH-l3
{Synthetic, based on Saccharomyces cerevisiae sequence}
Length = 229
Score = 26.9 bits (59), Expect = 3.0
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 8 IIFIFPQKKYKKDYRKKATDSKKKLHW 34
I+ +FP + +K + S + W
Sbjct: 50 IVLLFPINEDRKSSTSQQITSSYDVIW 76
>d1h95a_ b.40.4.5 (A:) Y-box protein 1 cold shock domain (YB1-CSD)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 25.2 bits (55), Expect = 3.2
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Query: 108 GFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVDCSIISGNLG 161
GFI + +ED F +AI+ + + + V+ ++ G G
Sbjct: 23 GFINRNDTKEDV-----FVHQTAIKKN--NPRKYLRSVGDGETVEFDVVEGEKG 69
>d1io2a_ c.55.3.1 (A:) Class II ribonuclease H (RNase HII) {Archaeon
Thermococcus kodakaraensis [TaxId: 311400]}
Length = 213
Score = 25.9 bits (56), Expect = 5.2
Identities = 15/113 (13%), Positives = 28/113 (24%), Gaps = 8/113 (7%)
Query: 10 FIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRH 69
+ + K K DSKK + +
Sbjct: 23 VVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVLDDYVILELPPDVIG----SREG 78
Query: 70 YIKEMTRLTHSRIRRTLVRSPESNESVLIPDHLDWREKGFITPDWNQEDCGAC 122
+ E ++ +L P+ V+ D D E+ F + + A
Sbjct: 79 TLNEFEVENFAKALNSLKVKPD----VIYADAADVDEERFARELGERLNFEAE 127
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 25.9 bits (55), Expect = 6.1
Identities = 13/145 (8%), Positives = 31/145 (21%), Gaps = 4/145 (2%)
Query: 33 HWQSNHKKIHTHNQEAQQGLHGYTLRENHLSDLHPRHYIKEMTRLTHSRIRRTLVRSPES 92
+ + + E + I + R + + +
Sbjct: 90 SKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQF 149
Query: 93 NESVLIPDHLDWREKGFITPDWNQEDCGACYAFSIASAIQGQIFKSTSEIEELSIQQVVD 152
P L E+ C + + + E+ + V
Sbjct: 150 CRKTSTPLILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVI 209
Query: 153 CSIISGNLGCAGGSLRNTLNYVQFA 177
+I G +R +N +
Sbjct: 210 DRLIQ----TTRGDIRQVINLLSTI 230
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 25.8 bits (56), Expect = 6.9
Identities = 9/63 (14%), Positives = 19/63 (30%)
Query: 4 KEWIIIFIFPQKKYKKDYRKKATDSKKKLHWQSNHKKIHTHNQEAQQGLHGYTLRENHLS 63
+ KKY+ + R K K +K ++ Q+ + +S
Sbjct: 110 ELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAIS 169
Query: 64 DLH 66
+
Sbjct: 170 NKQ 172
>d3b2ua1 c.10.2.5 (A:312-480) EGF receptor extracellular domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 169
Score = 24.9 bits (54), Expect = 9.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 136 FKSTSEIEELSIQQVVDCSIISGNL 160
FK + I +I+ +C+ ISG+L
Sbjct: 10 FKDSLSINATNIKHFKNCTSISGDL 34
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus
[TaxId: 5087]}
Length = 305
Score = 25.5 bits (55), Expect = 9.1
Identities = 6/44 (13%), Positives = 13/44 (29%), Gaps = 1/44 (2%)
Query: 247 GIYDDEACTSDYVNHAMLLVGYTRNSWILKNWWSHHWGDNGYMY 290
D C + + + + W WW+ Y++
Sbjct: 242 AGGADNVCE-TAITGMLDYMAQNTDVWTGAIWWAAGPWWGDYIF 284
>d1ulza2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal
domain {Aquifex aeolicus [TaxId: 63363]}
Length = 114
Score = 24.5 bits (53), Expect = 9.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 221 KVTLATVGPIAVSINASPHTFQLYASGIYDDEACTSDYVNHA 262
KV +A G IAV I + + IY++ T+ +V A
Sbjct: 4 KVLVANRGEIAVRIIRACKELGIPTVAIYNEVESTARHVKLA 45
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.425
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,245,775
Number of extensions: 57447
Number of successful extensions: 211
Number of sequences better than 10.0: 1
Number of HSP's gapped: 155
Number of HSP's successfully gapped: 35
Length of query: 309
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 224
Effective length of database: 1,240,546
Effective search space: 277882304
Effective search space used: 277882304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.9 bits)