BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17051
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus
GN=Atp6v0a1 PE=1 SV=3
Length = 839
Score = 175 bits (444), Expect = 8e-44, Method: Composition-based stats.
Identities = 80/107 (74%), Positives = 87/107 (81%)
Query: 38 GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
G G P FVAGV RER+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVF
Sbjct: 168 GRGAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVF 227
Query: 98 IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct: 228 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 274
>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis
GN=atp6v0a1 PE=2 SV=1
Length = 831
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 100/144 (69%), Gaps = 18/144 (12%)
Query: 1 MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
MADP +E TLL + ++G PL G FVAGV RER+P F
Sbjct: 142 MADPDLLEESSTLL---------EPSEMGRGAPLRLG---------FVAGVINRERIPTF 183
Query: 61 ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
ERMLWR CRGNVFLRQA+IE PLED +GD V+KSVFIIFFQGDQLK RV KICEGFRA+
Sbjct: 184 ERMLWRVCRGNVFLRQAQIENPLEDPVTGDSVHKSVFIIFFQGDQLKNRVKKICEGFRAS 243
Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
LYPCPE P +R+EM+ GV TRI+D
Sbjct: 244 LYPCPETPQERKEMATGVNTRIED 267
>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii
GN=ATP6V0A1 PE=2 SV=1
Length = 837
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 99/144 (68%), Gaps = 18/144 (12%)
Query: 1 MADPSREDEQVTLLGEEGLRAGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAF 60
MADP E +LL + ++G PL G FVAGV RER+P F
Sbjct: 142 MADPDLLGESSSLL---------EPSEMGRGTPLRLG---------FVAGVINRERIPTF 183
Query: 61 ERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRAT 120
ERMLWR CRGNVFLRQAEIE PLED +GD V+KSVFIIFFQGDQLK RV KICEGFRA+
Sbjct: 184 ERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEGFRAS 243
Query: 121 LYPCPEAPTDRREMSMGVTTRIDD 144
LYPCPE P +R+EM+ GV TRIDD
Sbjct: 244 LYPCPETPQERKEMASGVNTRIDD 267
>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus
GN=ATP6V0A1 PE=2 SV=1
Length = 838
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 87/107 (81%)
Query: 38 GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
G G P FVAGV RER+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVF
Sbjct: 161 GRGTPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVF 220
Query: 98 IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct: 221 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267
>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus
GN=ATP6V0A1 PE=1 SV=1
Length = 838
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 87/107 (81%)
Query: 38 GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
G G P FVAGV RER+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVF
Sbjct: 161 GRGAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVF 220
Query: 98 IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct: 221 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267
>sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus
norvegicus GN=Atp6v0a1 PE=2 SV=1
Length = 838
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 87/107 (81%)
Query: 38 GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
G G P FVAGV RER+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVF
Sbjct: 161 GRGAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVF 220
Query: 98 IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct: 221 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267
>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens
GN=ATP6V0A1 PE=1 SV=3
Length = 837
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 87/107 (81%)
Query: 38 GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
G G P FVAGV RER+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVF
Sbjct: 161 GRGTPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVF 220
Query: 98 IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRIDD
Sbjct: 221 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDD 267
>sp|A1A5G6|VPP1_XENTR V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus
tropicalis GN=atp6v0a1 PE=2 SV=1
Length = 837
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 79/107 (73%), Positives = 87/107 (81%)
Query: 38 GPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVF 97
G G P FVAGV RER+P FERMLWR CRGNVFLRQAEIE PLED +GD V+KSVF
Sbjct: 161 GRGAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDSVHKSVF 220
Query: 98 IIFFQGDQLKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
IIFFQGDQLK RV KICEGFRA+LYPCPE P +R+EM+ GV TRI+D
Sbjct: 221 IIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMATGVNTRIED 267
>sp|P30628|VPP1_CAEEL Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis
elegans GN=unc-32 PE=2 SV=3
Length = 905
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 83/98 (84%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
FVAGV RER+PAFER+LWRACRGNVFLR +EI+ L D +GDPV K VFIIFFQGD L
Sbjct: 206 FVAGVIQRERLPAFERLLWRACRGNVFLRTSEIDDVLNDTVTGDPVNKCVFIIFFQGDHL 265
Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
KT+V KICEGFRATLYPCP+ P +RREMS+GV TRI+D
Sbjct: 266 KTKVKKICEGFRATLYPCPDTPQERREMSIGVMTRIED 303
>sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens
GN=ATP6V0A4 PE=1 SV=2
Length = 840
Score = 134 bits (336), Expect = 3e-31, Method: Composition-based stats.
Identities = 54/98 (55%), Positives = 77/98 (78%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
F+AGV RERM +FER+LWR CRGNV+L+ +E++ PLED + + + K++FIIF+QG+QL
Sbjct: 172 FIAGVINRERMASFERLLWRICRGNVYLKFSEMDAPLEDPVTKEEIQKNIFIIFYQGEQL 231
Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
+ ++ KIC+GFRAT+YPCPE +RREM V R++D
Sbjct: 232 RQKIKKICDGFRATVYPCPEPAVERREMLESVNVRLED 269
>sp|Q920R6|VPP4_MOUSE V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus
GN=Atp6v0a4 PE=2 SV=1
Length = 833
Score = 130 bits (328), Expect = 2e-30, Method: Composition-based stats.
Identities = 54/98 (55%), Positives = 76/98 (77%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
F AGV RERM +FER+LWR CRGNV+L+ +E++T LED + + + K++FIIF+QG+QL
Sbjct: 172 FTAGVINRERMASFERLLWRVCRGNVYLKFSEMDTLLEDPVTKEEIKKNIFIIFYQGEQL 231
Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
+ ++ KIC+GFRAT+YPCPE +RREM V R++D
Sbjct: 232 RLKIKKICDGFRATIYPCPEHAAERREMLTSVNVRLED 269
>sp|Q54E04|VATM_DICDI Vacuolar proton translocating ATPase 100 kDa subunit
OS=Dictyostelium discoideum GN=vatM PE=1 SV=2
Length = 815
Score = 100 bits (250), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/100 (43%), Positives = 64/100 (64%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
F+ GV ++MP F+R LWR RGN +++ A IE + D +G+ K+VFI+FFQG++L
Sbjct: 184 FITGVMNTDKMPQFQRSLWRTTRGNNYVKDARIEEEIIDPQTGEETAKTVFIVFFQGERL 243
Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDDDY 146
+ ++ KICE F A +Y CP+ +R + VT RI D Y
Sbjct: 244 QQKIKKICESFGANIYDCPDNSFERSNLLQKVTVRITDLY 283
>sp|O97681|VPP2_BOVIN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Bos taurus
GN=ATP6V0A2 PE=2 SV=1
Length = 854
Score = 93.6 bits (231), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 64/100 (64%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
FV+G+ + ++ AFE+MLWR C+G + AE++ PLED +G+ + VF+I F G+Q+
Sbjct: 175 FVSGLINQGKVEAFEKMLWRVCKGYTIVTYAELDEPLEDPETGEVIKWYVFLISFWGEQI 234
Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDDDY 146
+V KIC+ + +YP P +RRE+ G+ TRI D Y
Sbjct: 235 GHKVKKICDCYHCHVYPYPNTAEERREIQEGLNTRIQDLY 274
>sp|Q8W4S4|VHAA3_ARATH Vacuolar proton ATPase a3 OS=Arabidopsis thaliana GN=VHA-a3 PE=1
SV=1
Length = 821
Score = 93.2 bits (230), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 65/98 (66%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
F+ G+ RE+ FER+L+RA RGN+F+RQ IE P+ D NSG+ K+VF++F+ G++
Sbjct: 193 FLTGLVPREKSMVFERILFRATRGNIFIRQTVIEEPVIDPNSGEKAEKNVFVVFYSGERA 252
Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
K++++KICE F A YP E + +M V+ R+ +
Sbjct: 253 KSKILKICEAFGANRYPFSEDLGRQAQMITEVSGRLSE 290
>sp|P15920|VPP2_MOUSE V-type proton ATPase 116 kDa subunit a isoform 2 OS=Mus musculus
GN=Atp6v0a2 PE=1 SV=2
Length = 856
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 64/100 (64%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
FV+G+ + R+ AFERMLWRAC+G + AE++ LED +G+ + VF+I F G+Q+
Sbjct: 175 FVSGLIQQGRVEAFERMLWRACKGYTIVTYAELDECLEDPETGEVIKWYVFLISFWGEQI 234
Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDDDY 146
+V KIC+ + +YP P +RRE+ G+ TRI D Y
Sbjct: 235 GHKVKKICDCYHCHIYPYPNTAEERREIQEGLNTRIQDLY 274
>sp|Q9SJT7|VHAA2_ARATH Vacuolar proton ATPase a2 OS=Arabidopsis thaliana GN=VHA-a2 PE=1
SV=1
Length = 821
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 65/98 (66%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
F+ G+ RE+ FER+L+RA RGN+F+RQ+ IE + D NSG+ K+VF++F+ G++
Sbjct: 194 FLTGLVPREKSMVFERILFRATRGNIFIRQSVIEESVVDPNSGEKAEKNVFVVFYSGERA 253
Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
K++++KICE F A YP E + +M V+ R+ +
Sbjct: 254 KSKILKICEAFGANRYPFSEDLGKQAQMMTEVSGRLSE 291
>sp|Q9Y487|VPP2_HUMAN V-type proton ATPase 116 kDa subunit a isoform 2 OS=Homo sapiens
GN=ATP6V0A2 PE=1 SV=2
Length = 856
Score = 90.1 bits (222), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 63/100 (63%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
FV+G+ + ++ AFE+MLWR C+G + AE++ LED +G+ + VF+I F G+Q+
Sbjct: 175 FVSGLINQGKVEAFEKMLWRVCKGYTIVSYAELDESLEDPETGEVIKWYVFLISFWGEQI 234
Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDDDY 146
+V KIC+ + +YP P +RRE+ G+ TRI D Y
Sbjct: 235 GHKVKKICDCYHCHVYPYPNTAEERREIQEGLNTRIQDLY 274
>sp|Q01290|VPH1_NEUCR V-type proton ATPase subunit a OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vph-1 PE=3 SV=1
Length = 856
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
FVAGV R+R+ AFER+LWR RGN+++ QAEI PL D +PV K+VF+IF G ++
Sbjct: 191 FVAGVIGRDRVDAFERILWRTLRGNLYMNQAEIPEPLIDPTINEPVLKNVFVIFAHGKEI 250
Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
++ +I E A +Y E RR+ V R++D
Sbjct: 251 LAKIRRISESMGAEVYNVDEHSDLRRDQVHEVNARLED 288
>sp|Q8RWZ7|VHAA1_ARATH Vacuolar proton ATPase a1 OS=Arabidopsis thaliana GN=VHA-a1 PE=1
SV=1
Length = 817
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 66/99 (66%)
Query: 46 RFVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQ 105
RF++G+ ++++ FERML+RA RGN+ Q + + D ++ + V K VF++FF G+Q
Sbjct: 191 RFISGIINKDKLLKFERMLFRATRGNMLFNQTTSDEEIMDPSTSEMVEKVVFVVFFSGEQ 250
Query: 106 LKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
+T+++KICE F A YP PE T +R+++ V +R+ D
Sbjct: 251 ARTKILKICEAFGANCYPVPEDTTKQRQLTREVLSRLSD 289
>sp|P32563|VPH1_YEAST V-type proton ATPase subunit a, vacuolar isoform OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPH1 PE=1
SV=3
Length = 840
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 54/100 (54%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQL 106
+V GV R+++ E++LWR RGN+F + EIE P+ D+ + + +K+ FI+F GD +
Sbjct: 186 YVTGVIARDKVATLEQILWRVLRGNLFFKTVEIEQPVYDVKTREYKHKNAFIVFSHGDLI 245
Query: 107 KTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDDDY 146
R+ KI E A LY + R + V + D Y
Sbjct: 246 IKRIRKIAESLDANLYDVDSSNEGRSQQLAKVNKNLSDLY 285
>sp|Q13488|VPP3_HUMAN V-type proton ATPase 116 kDa subunit a isoform 3 OS=Homo sapiens
GN=TCIRG1 PE=1 SV=3
Length = 830
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 15 GEEGLRAGGQTLKLGSSPPLSWGGPGVPHFN---RFVAGVALRERMPAFERMLWRACRGN 71
G E A T PL PG PH + FVAG + PA ER+LWRACRG
Sbjct: 135 GHEPQLAAAHTDGASERTPL-LQAPGGPHQDLRVNFVAGAVEPHKAPALERLLWRACRGF 193
Query: 72 VFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGFRATLYP 123
+ E+E PLE +G+P F+I + G+Q+ ++ KI + F ++P
Sbjct: 194 LIASFRELEQPLEHPVTGEPATWMTFLISYWGEQIGQKIRKITDCFHCHVFP 245
>sp|O13742|VPH1_SCHPO V-type proton ATPase subunit a OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vph1 PE=3 SV=2
Length = 831
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 47 FVAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDP-VYKSVFIIFFQGDQ 105
FV+G+ + ER+LWR RGN+F+ Q + L I+ + K++F++ G Q
Sbjct: 201 FVSGIIPTVKFQFLERILWRTLRGNLFIHQVRADDSL--IHGAEKNEEKTIFLVIAHGTQ 258
Query: 106 LKTRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
+ R+ KI E ATL+P E R I D
Sbjct: 259 ILLRIRKISESLGATLFPVEEDAPGRTSQIQQANVSISD 297
>sp|P37296|STV1_YEAST V-type proton ATPase subunit a, Golgi isoform OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=STV1 PE=1
SV=2
Length = 890
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 48 VAGVALRERMPAFERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFIIFFQGDQLK 107
+ G R ++ R+LWR RGN+ + IE PL + + V K FIIF G+ L
Sbjct: 240 ITGSIRRTKVDILNRILWRLLRGNLIFQNFPIEEPL--LEGKEKVEKDCFIIFTHGETLL 297
Query: 108 TRVMKICEGFRATLYPCPEAPTDRREMSMGVTTRIDD 144
+V ++ + + T E+ + +IDD
Sbjct: 298 KKVKRVIDSLNGKIV---SLNTRSSELVDTLNRQIDD 331
>sp|Q757B6|DPH2_ASHGO Diphthamide biosynthesis protein 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DPH2
PE=3 SV=1
Length = 582
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 13/77 (16%)
Query: 26 LKLGSSPPLSWGGPGVPHFNRFVAGVAL----------RERMPAFERMLWRACRGNVFLR 75
L L +P LSW G V FN + G++ E +P F+ + + + LR
Sbjct: 421 LTLALAPELSWTGAWVVDFNTVIDGISADLGLQAGAIPAENVPEFDAVTGKYVGNSRPLR 480
Query: 76 Q---AEIETPLEDINSG 89
+ EIE+P E I +G
Sbjct: 481 ELNHLEIESPQESITTG 497
>sp|A4KX74|ESTE_HVAVE Putative esterase OS=Heliothis virescens ascovirus 3e GN=ORF19 PE=3
SV=1
Length = 655
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 62 RMLWRACRGNVFLRQAEI----ETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMKICEGF 117
R L+ + NV + A + +P + VY+SV + F +L VM G
Sbjct: 303 RDLYCSSNSNVMVTTARLLGMPPSPATESGKERSVYESVRYLSFVEPKL---VMSKLYGL 359
Query: 118 RATLYPCPEAPTDRREMSMGV 138
+A +PCP + +RR + G+
Sbjct: 360 KAAFHPCPLSVNNRRASTFGI 380
>sp|C4K4F9|EFG_HAMD5 Elongation factor G OS=Hamiltonella defensa subsp. Acyrthosiphon
pisum (strain 5AT) GN=fusA PE=3 SV=1
Length = 701
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
Query: 33 PLSWGGPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVF-------LRQAEIETPLED 85
PL GG G N V GV +E +PA ++ + + V +R A + D
Sbjct: 522 PLEPGGKGYEFLNEIVGGVIPKEYIPAVDKGVQEQLKNGVLAAYPVVDVRVAVFDGSYHD 581
Query: 86 INSGDPVYKSVFIIFFQGDQLKTR------VMKI 113
++S + +K + F+ +K + +MKI
Sbjct: 582 VDSSEIAFKVAGAMAFKEGFMKAKPVLLEPIMKI 615
>sp|Q6FM46|COPB_CANGA Coatomer subunit beta OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC26 PE=3
SV=1
Length = 972
Score = 31.2 bits (69), Expect = 2.7, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Query: 68 CRGNVFLRQAEIETP---------LEDINSGDPVYKSVFIIFFQGDQLKTRVMK 112
C+ N FL +E++ ++DI S DP+ ++ F+ F + D ++T +K
Sbjct: 191 CKRNAFLGLSELDRDNALQYLQDNIDDIESLDPLLQAAFVQFIRKDAIQTPALK 244
>sp|P41810|COPB_YEAST Coatomer subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC26 PE=1 SV=2
Length = 973
Score = 30.4 bits (67), Expect = 4.2, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
Query: 68 CRGNVFLRQAEI---------ETPLEDINSGDPVYKSVFIIFFQGDQLKTRVMK 112
C+ N F+ AE+ E + DI + DP+ ++VF+ F + D +T +K
Sbjct: 191 CKRNAFIGLAELDRENALHYLENNIADIENLDPLLQAVFVQFIRQDANRTPALK 244
>sp|Q7UKG9|TRPB_RHOBA Tryptophan synthase beta chain OS=Rhodopirellula baltica (strain
SH1) GN=trpB PE=3 SV=1
Length = 407
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 4 PSREDEQVTLLGEEGLRAGGQTLKLG-SSPPLSWGGPGVPH 43
P EDE V ++G E AGG++ G + PLS+G PGV H
Sbjct: 256 PFVEDEGVRMVGVE---AGGRSATPGDHASPLSYGNPGVLH 293
>sp|A6W0S5|MNMC_MARMS tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional
protein MnmC OS=Marinomonas sp. (strain MWYL1) GN=mnmC
PE=3 SV=1
Length = 674
Score = 30.0 bits (66), Expect = 6.0, Method: Composition-based stats.
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 31 SPPLSWGGPGVPHFNRF 47
SP LSWG G PH N+F
Sbjct: 9 SPALSWGEDGAPHSNQF 25
>sp|A5D9C6|MAF1_BOVIN Repressor of RNA polymerase III transcription MAF1 homolog OS=Bos
taurus GN=MAF1 PE=2 SV=1
Length = 260
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
Query: 21 AGGQTLKLGSSPPLSWGGPGVPHFNRFVAGVALRERMPAFERMLWRACRGNVFLRQAEIE 80
+ ++ + P LSW V A+RE A + LW A + L + +I
Sbjct: 111 STARSHEFSREPSLSWVVNAV----NCSLFSAVREDFKALKPQLWNAVDEEICLAECDIY 166
Query: 81 TPLEDINSGDPVYKS----VFIIFFQGDQLKTRVMKICEGFRATLYPCPEA 127
+ D++S DP + F FF +LK V C + Y EA
Sbjct: 167 SYNPDLDS-DPFGEDGSLWSFNYFFYNKRLKRIVFFSCRSISGSTYTPSEA 216
>sp|Q604P3|TRPB_METCA Tryptophan synthase beta chain OS=Methylococcus capsulatus (strain
ATCC 33009 / NCIMB 11132 / Bath) GN=trpB PE=3 SV=1
Length = 405
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 4 PSREDEQVTLLGEEGLRAGGQTLKLG-SSPPLSWGGPGVPHFNR 46
P +D +V + G E A G ++ G S PLS G PGV H NR
Sbjct: 254 PFVDDREVAMYGVE---AAGDGIETGRHSAPLSAGRPGVLHGNR 294
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,383,593
Number of Sequences: 539616
Number of extensions: 2611403
Number of successful extensions: 4513
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4487
Number of HSP's gapped (non-prelim): 36
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)