RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17051
         (152 letters)



>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium
          discoideum [TaxId: 44689]}
          Length = 102

 Score = 23.3 bits (50), Expect = 8.2
 Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 6/40 (15%)

Query: 60 FERMLWRACRGNVFLRQAEIETPLEDINSGDPVYKSVFII 99
          ++  L     G+   + AE+      +NSGD      F++
Sbjct: 2  YKPRLLH-ISGDKNAKVAEVPLATSSLNSGD-----CFLL 35


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.139    0.443 

Gapped
Lambda     K      H
   0.267   0.0492    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 607,352
Number of extensions: 26984
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 3
Length of query: 152
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 74
Effective length of database: 1,336,656
Effective search space: 98912544
Effective search space used: 98912544
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.2 bits)