BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17054
(171 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 233 bits (594), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 130/169 (76%)
Query: 1 MPSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSIT 60
+P + FLWN+FQ VD+DRSG IS +ELQ ALSNGTWTPFNP TVR +I MFD+ N+ +
Sbjct: 22 LPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 81
Query: 61 FEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRF 120
F +F +WKY+TDWQN FR++DRDNSG IDK+EL AL+ FGYRLSD+ +++KFDR
Sbjct: 82 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 141
Query: 121 GRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
GRG I FDDFIQ CI L LT FR YDTDQDG I + YEQ+L MVFS+
Sbjct: 142 GRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 190
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 232 bits (591), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 129/169 (76%)
Query: 1 MPSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSIT 60
+P + FLWN+FQ VD+DRSG IS ELQ ALSNGTWTPFNP TVR +I MFD+ N+ +
Sbjct: 3 LPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 62
Query: 61 FEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRF 120
F +F +WKY+TDWQN FR++DRDNSG IDK+EL AL+ FGYRLSD+ +++KFDR
Sbjct: 63 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 122
Query: 121 GRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
GRG I FDDFIQ CI L LT FR YDTDQDG I + YEQ+L MVFS+
Sbjct: 123 GRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 171
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 229 bits (585), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 128/169 (75%)
Query: 1 MPSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSIT 60
+P + FLWN+FQ VD+DRSG IS ELQ ALSNGTWTPFNP TVR +I MFD+ N+ +
Sbjct: 3 LPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 62
Query: 61 FEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRF 120
F +F +WKY+TDWQN FR++DRDNSG IDK+EL AL+ GYRLSD+ +++KFDR
Sbjct: 63 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQ 122
Query: 121 GRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
GRG I FDDFIQ CI L LT FR YDTDQDG I + YEQ+L MVFS+
Sbjct: 123 GRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 171
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 228 bits (581), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 127/166 (76%)
Query: 4 REFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFED 63
+ FLWN+FQ VD+DRSG IS ELQ ALSNGTWTPFNP TVR +I MFD+ N+ + F +
Sbjct: 24 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 83
Query: 64 FGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRG 123
F +WKY+TDWQN FR++DRDNSG IDK+EL AL+ FGYRLSD+ +++KFDR GRG
Sbjct: 84 FTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG 143
Query: 124 TILFDDFIQCCITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
I FDDFIQ CI L LT FR YDTDQDG I + YEQ+L MVFS+
Sbjct: 144 QIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 189
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 228 bits (580), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 127/166 (76%)
Query: 4 REFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFED 63
+ FLWN+FQ VD+DRSG IS ELQ ALSNGTWTPFNP TVR +I MFD+ N+ + F +
Sbjct: 2 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 61
Query: 64 FGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRG 123
F +WKY+TDWQN FR++DRDNSG IDK+EL AL+ FGYRLSD+ +++KFDR GRG
Sbjct: 62 FTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG 121
Query: 124 TILFDDFIQCCITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
I FDDFIQ CI L LT FR YDTDQDG I + YEQ+L MVFS+
Sbjct: 122 QIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 167
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 228 bits (580), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 127/166 (76%)
Query: 4 REFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFED 63
+ FLWN+FQ VD+DRSG IS ELQ ALSNGTWTPFNP TVR +I MFD+ N+ + F +
Sbjct: 3 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 62
Query: 64 FGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRG 123
F +WKY+TDWQN FR++DRDNSG IDK+EL AL+ FGYRLSD+ +++KFDR GRG
Sbjct: 63 FTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRG 122
Query: 124 TILFDDFIQCCITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
I FDDFIQ CI L LT FR YDTDQDG I + YEQ+L MVFS+
Sbjct: 123 QIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 168
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 222 bits (565), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/166 (63%), Positives = 126/166 (75%), Gaps = 2/166 (1%)
Query: 4 REFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFED 63
+ FLWN+FQ VD+DRSG IS ELQ ALSNGTWTPFNP TVR +I MFD+ N+ + F +
Sbjct: 3 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 62
Query: 64 FGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRG 123
F +WKY+TDWQN FR++DRDNSG IDK+EL AL+ GYRLSD+ +++KFDR GRG
Sbjct: 63 FTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRG 120
Query: 124 TILFDDFIQCCITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
I FDDFIQ CI L LT FR YDTDQDG I + YEQ+L MVFS+
Sbjct: 121 QIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 166
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 133 bits (335), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSN----GTWTPFNPETVRLMIGMFDKHNRGS 58
+++ L+ F V + G I ADELQ L+ G + PFN ET RLM+ M D+ G+
Sbjct: 31 TQDPLYGYFAAV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGT 89
Query: 59 ITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFD 118
+ F +F LW + W+ F SFD D SG +D EL ALTT G+RLS + + ++ K++
Sbjct: 90 MGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS 149
Query: 119 RFGRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
G+ I FDD+I CC+ L ALT +FR DT Q GV+ Y+ F+ V S+
Sbjct: 150 TNGK--ITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVMSV 198
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 99/171 (57%), Gaps = 7/171 (4%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSN----GTWTPFNPETVRLMIGMFDKHNRGS 58
+++ L+ F V + G I ADELQ L+ G + PFN ET RLM+ M D+ G+
Sbjct: 31 TQDPLYGYFAAV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGT 89
Query: 59 ITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFD 118
+ F +F LW + W+ F S D D SG +D EL ALTT G+RLS + + ++ K++
Sbjct: 90 MGFNEFKELWAVLNGWRQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS 149
Query: 119 RFGRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
G+ I FDD+I CC+ L ALT +FR DT Q GV+ Y+ F+ V S+
Sbjct: 150 TNGK--ITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVMSV 198
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 93/156 (59%), Gaps = 6/156 (3%)
Query: 18 RSGFISADELQHALSN----GTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTD 73
+ G I ADELQ L+ G + PFN ET RLM+ M D+ G++ F +F LW +
Sbjct: 14 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 73
Query: 74 WQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQC 133
W+ F SFD D SG +D EL ALTT G+RL+ + + ++ K++ G+ I FDD+I C
Sbjct: 74 WRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGK--ITFDDYIAC 131
Query: 134 CITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
C+ L ALT +FR D+ Q G++ Y+ F+ V ++
Sbjct: 132 CVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV 167
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 7 LWNIFQG-------VDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSI 59
LW + G D DRSG + ELQ AL+ + NP+TV + + G I
Sbjct: 67 LWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFR-LNPQTVNSIAKRY--STSGKI 123
Query: 60 TFEDFGALWKYVTDWQNCFRSFDRDNSGNID 90
TF+D+ A + + FR D G ++
Sbjct: 124 TFDDYIACCVKLRALTDSFRRRDSAQQGMVN 154
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 18 RSGFISADELQHALS----NGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTD 73
+ G + A+ELQ L+ NGT++PF+ ET R+MI M D+ + G + F F LW +
Sbjct: 12 QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNA 71
Query: 74 WQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQC 133
W+ F + D+D SG ++ EL A+ GYRLS + + T++K++ + GR I FDD++ C
Sbjct: 72 WKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR--IFFDDYVAC 129
Query: 134 CITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
C+ L ALT FR D Q G Y+ FL ++
Sbjct: 130 CVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI 165
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 115 bits (289), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 18 RSGFISADELQHALS----NGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTD 73
+ G + A+ELQ L+ NGT++PF+ ET R+MI M D+ + G + F F LW +
Sbjct: 12 QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNA 71
Query: 74 WQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQC 133
W+ F + D+D SG ++ EL A+ GYRLS + + T++K++ + GR I FDD++ C
Sbjct: 72 WKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR--IFFDDYVAC 129
Query: 134 CITLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSL 169
C+ L ALT F+ D Q G Y+ FL ++
Sbjct: 130 CVKLRALTDFFKKRDHLQQGSADFIYDDFLQGTMAI 165
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 102 bits (255), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 94/163 (57%), Gaps = 1/163 (0%)
Query: 1 MPSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSIT 60
M + L F+ VD D SG IS EL ALS+ PF+ T ++ M+DK++ G IT
Sbjct: 23 MNDNQELMEWFRAVDTDGSGAISVPELNAALSSA-GVPFSLATTEKLLHMYDKNHSGEIT 81
Query: 61 FEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRF 120
F++F L ++ + FR D G +D +E+ AAL + GY++S++ +++KFDR
Sbjct: 82 FDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQ 141
Query: 121 GRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVITIHYEQFL 163
RG++ FDD+++ I + + + F YD ++ G +T ++ F+
Sbjct: 142 RRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFI 184
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 8/151 (5%)
Query: 22 ISADELQHALSNG-TWTP------FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDW 74
+SA EL + L+ T P F +T R M+ + D G + FE+F LW + W
Sbjct: 20 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW 79
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCC 134
Q ++ FD D SG I SEL A G+ L++ + +++++ G G + FD+FI C
Sbjct: 80 QAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEG-GNMDFDNFISCL 138
Query: 135 ITLYALTSAFRSYDTDQDGVITIHYEQFLDM 165
+ L A+ AF+S D D G I ++ +++L +
Sbjct: 139 VRLDAMFRAFKSLDKDGTGQIQVNIQEWLQL 169
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 22 ISADELQHALSNG-TWTP------FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDW 74
+SA EL + L+ T P F +T R M+ + D G + FE+F LW + W
Sbjct: 31 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKRW 90
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCC 134
Q ++ FD D SG I SEL A G+ L++ + +++++ G + FD+FI C
Sbjct: 91 QAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSD-ESGNMDFDNFISCL 149
Query: 135 ITLYALTSAFRSYDTDQDGVITIHYEQFLDMVF 167
+ L A+ AF+S D D G I ++ +++L +
Sbjct: 150 VRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTM 182
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 5 EFLWN-------IFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRG 57
++LWN I++ D DRSG I + EL A + N ++I + + G
Sbjct: 81 KYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGF-HLNEHLYNMIIRRYSDES-G 138
Query: 58 SITFEDFGALWKYVTDWQNCFRSFDRDNSGNI 89
++ F++F + + F+S D+D +G I
Sbjct: 139 NMDFDNFISCLVRLDAMFRAFKSLDKDGTGQI 170
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 22 ISADELQHALSNG-TWTP------FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDW 74
+SA EL + L+ T P F +T R M+ + D G + FE+F LW + W
Sbjct: 20 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW 79
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCC 134
Q ++ FD D SG I +EL A G+ L+ + +++++ G + FD+FI C
Sbjct: 80 QGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD-ETGNMDFDNFISCL 138
Query: 135 ITLYALTSAFRSYDTDQDGVITIHYEQFLDMVF 167
+ L A+ AFRS D + G I ++ +++L +
Sbjct: 139 VRLDAMFRAFRSLDKNGTGQIQVNIQEWLQLTM 171
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 5 EFLWN-------IFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRG 57
++LWN I++ D DRSG I ++EL A + N ++I + G
Sbjct: 70 KYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGF-HLNQHIYSMIIRRYSDET-G 127
Query: 58 SITFEDFGALWKYVTDWQNCFRSFDRDNSGNI 89
++ F++F + + FRS D++ +G I
Sbjct: 128 NMDFDNFISCLVRLDAMFRAFRSLDKNGTGQI 159
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 22 ISADELQHALSNG-TWTP------FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDW 74
+SA EL + L+ T P F +T R M+ + D G + FE+F LW + W
Sbjct: 31 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW 90
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCC 134
Q ++ FD D SG I +EL A G+ L+ + +++++ G + FD+FI C
Sbjct: 91 QGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD-ETGNMDFDNFISCL 149
Query: 135 ITLYALTSAFRSYDTDQDGVITIHYEQFLDMVF 167
+ L A+ AFRS D + G I ++ +++L +
Sbjct: 150 VRLDAMFRAFRSLDKNGTGQIQVNIQEWLQLTM 182
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 5 EFLWN-------IFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRG 57
++LWN I++ D DRSG I ++EL A + N ++I + G
Sbjct: 81 KYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGF-HLNQHIYSMIIRRYSDET-G 138
Query: 58 SITFEDFGALWKYVTDWQNCFRSFDRDNSGNI 89
++ F++F + + FRS D++ +G I
Sbjct: 139 NMDFDNFISCLVRLDAMFRAFRSLDKNGTGQI 170
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 22 ISADELQHALSNG-TWTP------FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDW 74
+SA EL + L+ T P F +T R M+ + D G + FE+F LW + W
Sbjct: 31 VSATELMNILNKVVTRHPDLKTDGFGIDTSRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW 90
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCC 134
Q ++ FD D SG I +EL A G+ L+ + +++++ G + FD+FI C
Sbjct: 91 QGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD-ETGNMDFDNFISCL 149
Query: 135 ITLYALTSAFRSYDTDQDGVITIHYEQFLDMVF 167
+ L A+ AFRS D + G I ++ +++L +
Sbjct: 150 VRLDAMFRAFRSLDKNGTGQIQVNIQEWLQLTM 182
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 5 EFLWN-------IFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRG 57
++LWN I++ D DRSG I ++EL A + N ++I + G
Sbjct: 81 KYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGF-HLNQHIYSMIIRRYSDET-G 138
Query: 58 SITFEDFGALWKYVTDWQNCFRSFDRDNSGNI 89
++ F++F + + FRS D++ +G I
Sbjct: 139 NMDFDNFISCLVRLDAMFRAFRSLDKNGTGQI 170
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 39 FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAAL 98
F +T R M+ + D G + FE+F LW + WQ ++ F+ D SG I +EL A
Sbjct: 771 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAF 830
Query: 99 TTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVITIH 158
G+ L+ + +++++ G + FD+FI C + L A+ AFRS D + G I ++
Sbjct: 831 EAAGFHLNQHIYSMIIRRYSD-ETGNMDFDNFISCLVRLDAMFRAFRSLDKNGTGQIQVN 889
Query: 159 YEQFLDMVF 167
+++L +
Sbjct: 890 IQEWLQLTM 898
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 39 FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAAL 98
F+ E+ R M+ + D+ G + +F LW + ++ FR FD D SG++ E+ A+
Sbjct: 574 FSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAI 633
Query: 99 TTFGYRLSDRMIGTMLKKF--DRFGRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVIT 156
G++L ++ ++ +F D I FD+F++C + L L F+ D + G I
Sbjct: 634 EAAGFKLPCQLHQVIVARFADDEL---IIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQ 690
Query: 157 I 157
+
Sbjct: 691 L 691
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 22 ISADELQHALSNG-TWTP------FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDW 74
+SA EL + L+ T P F +T R M+ + D G + FE+F LW + W
Sbjct: 27 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW 86
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCC 134
Q ++ FD D SG I +EL A G+ L+ + +++++ G + FD+FI C
Sbjct: 87 QGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSD-ETGNMDFDNFISCL 145
Query: 135 ITLYALTSAFRSYD 148
+ L A+ AFRS D
Sbjct: 146 VRLDAMFRAFRSLD 159
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
+R + W F GVDRDRSG + +EL G +P+T M+ +FD G I+F
Sbjct: 51 TRIYQW--FMGVDRDRSGTLEINELMMGQFPGG-IRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 63 DFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGR 122
+F A++K++ N F DR+ SG ++ E+ AL G+ ++ R T L F R
Sbjct: 108 EFMAMYKFMELAYNLFVMNDRNRSGTLEPHEILPALQQLGFYINQR---TSLLLHRLFAR 164
Query: 123 GTILFDDFIQCCITLYALTSAFRS---------YDTDQDGVITIHYEQFLDMVFSL 169
G D + C I + A + RS Y + + +FLD+V SL
Sbjct: 165 GMAFCD--LNCWIAICAFAAQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTSL 218
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 39 FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAAL 98
F+ ET ++M+ M D+ G + ++F LW + +Q +R D D SG ++ E+ AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 99 TTFGYRLSDRMIGTMLKKF--DRFGRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVIT 156
G++L ++ ++ +F D I FD+F++C + L L F+ D + G I
Sbjct: 632 EEAGFKLPCQLHQVIVARFADDEL---IIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQ 688
Query: 157 I 157
+
Sbjct: 689 L 689
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 39 FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAAL 98
F+ ET ++M+ M D+ G + ++F LW + +Q +R D D SG ++ E+ AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 99 TTFGYRLSDRMIGTMLKKF--DRFGRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVIT 156
G++L ++ ++ +F D I FD+F++C + L L F+ D + G I
Sbjct: 632 EEAGFKLPCQLHQVIVARFADDEL---IIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQ 688
Query: 157 I 157
+
Sbjct: 689 L 689
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 39 FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAAL 98
F+ ET ++M+ M D+ G + ++F LW + +Q +R D D SG ++ E+ AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 99 TTFGYRLSDRMIGTMLKKF--DRFGRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVIT 156
G++L ++ ++ +F D I FD+F++C + L L F+ D + G I
Sbjct: 632 EEAGFKLPCQLHQVIVARFADDEL---IIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQ 688
Query: 157 I 157
+
Sbjct: 689 L 689
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 39 FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAAL 98
F+ ET ++M+ M D G + ++F LW + +Q +R D D SG ++ E+ AL
Sbjct: 571 FSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 630
Query: 99 TTFGYRLSDRMIGTMLKKF--DRFGRGTILFDDFIQCCITLYALTSAFRSYDTDQDGVIT 156
G+++ ++ ++ +F D+ I FD+F++C + L L F+ D + G I
Sbjct: 631 EEAGFKMPCQLHQVIVARFADDQL---IIDFDNFVRCLVRLETLFKIFKQLDPENTGTIE 687
Query: 157 I 157
+
Sbjct: 688 L 688
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
+R + W F GVDRDRSG + +EL G +P+T M+ +FD G I+F
Sbjct: 51 TRIYQW--FMGVDRDRSGTLEINELMMGQFPGG-IRLSPQTALRMMRIFDTDFNGHISFY 107
Query: 63 DFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGR 122
+F A++K++ N F R SG ++ E+ AL G+ ++ R T L F R
Sbjct: 108 EFMAMYKFMELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQR---TSLLLHRLFAR 164
Query: 123 GTILFDDFIQCCITLYALTSAFRS---------YDTDQDGVITIHYEQFLDMVFSL 169
G D + C I + A + RS Y + + +FLD+V SL
Sbjct: 165 GMAFCD--LNCWIAICAFAAQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTSL 218
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW-KYVTD 73
D+D G I+ +EL + + P E ++ MI D G+I F++F +L K V D
Sbjct: 20 DKDGDGCITVEELATVIRSLDQNP-TEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKD 78
Query: 74 ------WQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ F+ FD+D +G I SEL + G +L+D + M+K+ D G G + +
Sbjct: 79 TDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNY 138
Query: 128 DDFIQCCITL 137
++F++ +T+
Sbjct: 139 EEFVKMMMTV 148
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + D++ F FD+D G I EL+ + + ++ + M+ + D G GTI FD
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Query: 129 DFIQCCITLY-------ALTSAFRSYDTDQDGVIT 156
+F+ L AF+ +D DQ+G I+
Sbjct: 67 EFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYIS 101
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
+ E L F+ D+D++G+ISA EL+H + N E V MI D G + +E
Sbjct: 81 AEEELKEAFKVFDKDQNGYISASELRHVMIN-LGEKLTDEEVEQMIKEADLDGDGQVNYE 139
Query: 63 DFGALWKYV 71
+F + V
Sbjct: 140 EFVKMMMTV 148
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF-GALWKYVTD 73
D+D G I+ EL + + P E +R M+ D+ G++ F +F G + + + D
Sbjct: 20 DKDGDGCITTRELGTVMRSLGQNPTEAE-LRDMMSEIDRDGNGTVDFPEFLGMMARKMKD 78
Query: 74 WQN------CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
N FR FD+D +G + +EL +T G +LSD + M++ D G G + +
Sbjct: 79 TDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNY 138
Query: 128 DDFIQCCIT 136
++F++ ++
Sbjct: 139 EEFVRVLVS 147
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ VT+++ F FD+D G I EL + + G ++ + M+ + DR G GT+ F
Sbjct: 7 EQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFP 66
Query: 129 DFIQCCI-------TLYALTSAFRSYDTDQDGVIT 156
+F+ + AFR +D D +G ++
Sbjct: 67 EFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVS 101
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
+ E + F+ D+D +GF+SA EL+H ++ + E V MI D G + +E
Sbjct: 81 NEEEIREAFRVFDKDGNGFVSAAELRHVMTR-LGEKLSDEEVDEMIRAADTDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF---GALWKYV 71
D+D G I+ EL + + P E ++ MI D G+I F +F A W
Sbjct: 321 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARWMKD 379
Query: 72 TDWQN----CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
TD + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 380 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 128 DDFIQ 132
++F+Q
Sbjct: 440 EEFVQ 444
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 63 DF 64
+F
Sbjct: 441 EF 442
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F L
Sbjct: 21 DKDGDGCITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNLMARKMKD 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G I +
Sbjct: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 139
Query: 128 DDFIQCCIT 136
D+F++ +
Sbjct: 140 DEFVKVMMA 148
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
+++++ F FD+D G I EL + + G ++ + M+ + D G GTI F +F
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 131 IQCCI-------TLYALTSAFRSYDTDQDGVIT 156
+ + L AFR +D DQ+G I+
Sbjct: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFIS 102
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L F+ D+D++GFISA EL+H ++N E V MI D G I ++
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYD 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F L
Sbjct: 17 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNLMARKMKD 75
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 76 TDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 135
Query: 128 DDFIQCCIT 136
++F+Q +
Sbjct: 136 EEFVQVMMA 144
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L F+ D+D +GFISA EL+H ++N E V MI D G + +E
Sbjct: 78 SEEELKEAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQVNYE 136
Query: 63 DF 64
+F
Sbjct: 137 EF 138
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F L
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNLMARKMKD 78
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 79 TDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Query: 128 DDFIQCCIT 136
++F+Q +
Sbjct: 139 EEFVQVMMA 147
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L F+ D+D +GFISA EL+H ++N E V MI D G + +E
Sbjct: 81 SEEELKEAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW----KY 70
D+D G I+ EL + + P E ++ MI D G+I F +F + KY
Sbjct: 321 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKY 379
Query: 71 V---TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 380 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 128 DDFIQ 132
++F+Q
Sbjct: 440 EEFVQ 444
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 63 DF 64
+F
Sbjct: 441 EF 442
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF-GALWKYVTD 73
D+D G I+ EL + + P E ++ MI D G+I F +F + + + D
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNLMARKMKD 78
Query: 74 ------WQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 79 TDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Query: 128 DDFIQCCIT 136
++F+Q +
Sbjct: 139 EEFVQVMMA 147
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L F+ D+D +GFISA EL+H ++N E V MI D G + +E
Sbjct: 81 SEEKLKEAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDW 74
D+D G I+ EL + + P E ++ MI D G+I F +F +L
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLSLMARKMKE 78
Query: 75 QN-------CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
Q+ F+ FDRD +G I +EL +T G +L+D + M+++ D G G I +
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 128 DDFIQCCIT 136
++F++ ++
Sbjct: 139 EEFVRMMVS 147
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 49 GMFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNIDKSE-LSAALTTF 101
+FDK G+IT ++ G + + + + Q+ D D +G ID E LS
Sbjct: 17 ALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKM 76
Query: 102 GYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCITLY------ALTSAFRSYDTDQDGVI 155
+ S+ + K FDR G G I + L + R D D DG
Sbjct: 77 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDG-- 134
Query: 156 TIHYEQFLDMVFS 168
I+YE+F+ M+ S
Sbjct: 135 HINYEEFVRMMVS 147
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L F+ DRD +G ISA EL+H ++N + V MI D G I +E
Sbjct: 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTN-LGEKLTDDEVDEMIREADIDGDGHINYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDW 74
D+D G I+ EL + + P E ++ MI D G+I F +F +L
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLSLMARKMKE 78
Query: 75 QN-------CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
Q+ F+ FDRD +G I +EL +T G +L+D + M+++ D G G I +
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 128 DDFIQCCIT 136
++F++ ++
Sbjct: 139 EEFVRMMVS 147
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 49 GMFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNIDKSE-LSAALTTF 101
+FDK G+IT ++ G + + + + Q+ D D +G ID E LS
Sbjct: 17 ALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKM 76
Query: 102 GYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCITLY------ALTSAFRSYDTDQDGVI 155
+ S+ + K FDR G G I + L + R D D DG
Sbjct: 77 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDG-- 134
Query: 156 TIHYEQFLDMVFS 168
I+YE+F+ M+ S
Sbjct: 135 HINYEEFVRMMVS 147
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L F+ DRD +G ISA EL+H ++N + V MI D G I +E
Sbjct: 81 SEEELIEAFKVFDRDGNGLISAAELRHVMTN-LGEKLTDDEVDEMIREADIDGDGHINYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF---------- 64
D D G IS EL + TP E + +I D+ G+I FE+F
Sbjct: 27 DADGGGDISVKELGTVMRMLGQTP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE 85
Query: 65 GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGT 124
A K + CFR FDR+ G ID EL+ G ++D I +++K D+ G
Sbjct: 86 DAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGR 145
Query: 125 ILFDDFIQ 132
I FD+F++
Sbjct: 146 IDFDEFLK 153
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD D G+I EL + G + + ++++ D G GTI F+
Sbjct: 14 EMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFE 73
Query: 129 DFIQCCI----------TLYALTSAFRSYDTDQDGVI 155
+F+ + + L FR +D + DG I
Sbjct: 74 EFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYI 110
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
S E L F+ DR+ G+I A+EL + + E + ++ DK+N G I F
Sbjct: 90 KSEEELAECFRIFDRNADGYIDAEELAE-IFRASGEHVTDEEIESLMKDGDKNNDGRIDF 148
Query: 62 EDFGALWKYV 71
++F + + V
Sbjct: 149 DEFLKMMEGV 158
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW----KY 70
D+D G I+ EL + + P E ++ MI D G+I F +F + KY
Sbjct: 320 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLTMMARKMKY 378
Query: 71 V---TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 379 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 438
Query: 128 DDFIQ 132
++F+Q
Sbjct: 439 EEFVQ 443
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 63 DF 64
+F
Sbjct: 440 EF 441
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW----KY 70
D+D G I+ EL + + P E ++ MI D G+I F +F + KY
Sbjct: 320 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLTMMARKMKY 378
Query: 71 V---TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 379 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 438
Query: 128 DDFIQ 132
++F+Q
Sbjct: 439 EEFVQ 443
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 63 DF 64
+F
Sbjct: 440 EF 441
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW----KY 70
D+D G I+ EL + + P E ++ MI D G+I F +F + KY
Sbjct: 321 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLTMMARKMKY 379
Query: 71 V---TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 380 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 128 DDFIQ 132
++F+Q
Sbjct: 440 EEFVQ 444
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 63 DF 64
+F
Sbjct: 441 EF 442
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F L
Sbjct: 21 DKDGDGCITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNLMARKMKD 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G I +
Sbjct: 80 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY 139
Query: 128 DDFIQCCIT 136
++F++ +
Sbjct: 140 EEFVKVMMA 148
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
+++++ F FD+D G I EL + + G ++ + M+ + D G GTI F +F
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 131 IQCCI-------TLYALTSAFRSYDTDQDGVIT 156
+ + L AFR +D DQ+G I+
Sbjct: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFIS 102
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L F+ D+D++GFISA EL+H ++N E V MI D G I +E
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYE 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 140 EEFVQMM 146
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 18 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 76
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 77 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 137 EEFVQMM 143
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 63 DF 64
+F
Sbjct: 138 EF 139
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 140 EEFVQMM 146
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 18 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 76
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 77 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 137 EEFVQMM 143
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 63 DF 64
+F
Sbjct: 138 EF 139
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 140 EEFVQMM 146
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 19 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 77
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 78 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 137
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 138 EEFVQMM 144
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 80 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 138
Query: 63 DF 64
+F
Sbjct: 139 EF 140
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 17 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 75
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 76 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 135
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 136 EEFVQMM 142
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 78 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 136
Query: 63 DF 64
+F
Sbjct: 137 EF 138
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 139 EEFVQMM 145
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 18 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 76
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 77 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 137 EEFVQMM 143
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 63 DF 64
+F
Sbjct: 138 EF 139
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNY 139
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 140 EEFVQMM 146
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDQMIREADIDGDGQVNYE 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 22 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 80
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 81 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 140
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 141 EEFVQMM 147
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 83 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 141
Query: 63 DF 64
+F
Sbjct: 142 EF 143
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 26 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 84
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 85 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 144
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 145 EEFVQMM 151
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 87 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 145
Query: 63 DF 64
+F
Sbjct: 146 EF 147
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 139 EEFVQMM 145
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 16 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 74
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 75 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 134
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 135 EEFVQMM 141
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 77 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 135
Query: 63 DF 64
+F
Sbjct: 136 EF 137
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 24 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 82
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 83 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 142
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 143 EEFVQMM 149
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 85 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 143
Query: 63 DF 64
+F
Sbjct: 144 EF 145
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV--- 71
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 72 ----TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 140 EEFVQMM 146
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV--- 71
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 287 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 345
Query: 72 ----TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 346 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 405
Query: 128 DDFIQ 132
++F+Q
Sbjct: 406 EEFVQ 410
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 63 DF 64
+F
Sbjct: 407 EF 408
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV--- 71
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 287 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 345
Query: 72 ----TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 346 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 405
Query: 128 DDFIQ 132
++F+Q
Sbjct: 406 EEFVQ 410
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 63 DF 64
+F
Sbjct: 407 EF 408
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLTMMARKMKD 78
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 139 EEFVQMM 145
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV--- 71
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 284 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 342
Query: 72 ----TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 343 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 402
Query: 128 DDFIQ 132
++F+Q
Sbjct: 403 EEFVQ 407
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 345 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 403
Query: 63 DF 64
+F
Sbjct: 404 EF 405
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV--- 71
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 322 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 380
Query: 72 ----TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 381 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 440
Query: 128 DDFIQ 132
++F+Q
Sbjct: 441 EEFVQ 445
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 383 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 441
Query: 63 DF 64
+F
Sbjct: 442 EF 443
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV--- 71
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 321 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 379
Query: 72 ----TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 380 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 128 DDFIQ 132
++F+Q
Sbjct: 440 EEFVQ 444
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 63 DF 64
+F
Sbjct: 441 EF 442
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV--- 71
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 321 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 379
Query: 72 ----TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 380 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 128 DDFIQ 132
++F+Q
Sbjct: 440 EEFVQ 444
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 63 DF 64
+F
Sbjct: 441 EF 442
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV--- 71
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 320 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLTMMARKMKD 378
Query: 72 ----TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 379 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 438
Query: 128 DDFIQ 132
++F+Q
Sbjct: 439 EEFVQ 443
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 63 DF 64
+F
Sbjct: 440 EF 441
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKY---- 70
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 16 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 74
Query: 71 --VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + FR FD+D +G I +EL +T G +L+D + M+++ + G G + ++
Sbjct: 75 TDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 134
Query: 129 DFIQCC 134
+F+Q
Sbjct: 135 EFVQMM 140
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G L+D + M+++ D G G + +
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNY 139
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 140 EEFVQMM 146
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEXLTDEEVDEMIREADIDGDGQVNYE 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G L+D + M+++ D G G + +
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNY 138
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 139 EEFVQMM 145
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEXLTDEEVDEMIREADIDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF-GALWKYVTD 73
D+D G I+ EL + + P E ++ MI D G+I F +F + + + D
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 74 WQN----CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDD 129
+ FR FD+D +G I +EL +T G +L+D + M+++ D G G + +++
Sbjct: 79 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 130 FI 131
F+
Sbjct: 139 FV 140
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +GFISA EL+H ++N E V MI D G + +E
Sbjct: 79 SEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 63 DF 64
+F
Sbjct: 138 EF 139
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 80 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Query: 128 DDFIQCCIT 136
++F+ T
Sbjct: 140 EEFVTMMTT 148
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +GFISA EL+H ++N E V MI D G + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ + G G + +
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNY 138
Query: 128 DDFIQCC 134
++F+Q
Sbjct: 139 EEFVQMM 145
Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI + G + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREANIDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV--- 71
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 312 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLIMMARKMKD 370
Query: 72 ----TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 371 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 430
Query: 128 DDFIQ 132
++F+Q
Sbjct: 431 EEFVQ 435
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 431
Query: 63 DF 64
+F
Sbjct: 432 EF 433
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
++ + F D D SG I A EL+ A+ + P E ++ MI DK G+I F
Sbjct: 25 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP-KKEEIKKMISEIDKDGSGTIDF 83
Query: 62 EDFGALWKYVTDWQN-------CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTML 114
E+F + ++ FR FD DNSG I +L G L++ + M+
Sbjct: 84 EEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMI 143
Query: 115 KKFDRFGRGTILFDDFIQCC 134
+ DR I D+FI+
Sbjct: 144 AEADRNDDNEIDEDEFIRIM 163
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 65 GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGT 124
G + + + F FD D SG ID EL A+ G+ I M+ + D+ G GT
Sbjct: 21 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGT 80
Query: 125 ILFDDFIQCCI-------TLYALTSAFRSYDTDQDGVITIH 158
I F++F+ + + AFR +D D G ITI
Sbjct: 81 IDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIK 121
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD+DNSG+I SEL+ + + G S+ + ++ + D G I F
Sbjct: 8 EQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFS 67
Query: 129 DF-------IQCCITLYALTSAFRSYDTDQDGVIT 156
+F ++C + L AF+ +D + DG+I+
Sbjct: 68 EFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLIS 102
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D SG ISA EL + + +P E LM D +I F +F AL
Sbjct: 21 DKDNSGSISASELATVMRSLGLSPSEAEVADLM-NEIDVDGNHAIEFSEFLALMSRQLKC 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ F+ FD++ G I +EL LT+ G +L+D + ML++ G G I
Sbjct: 80 NDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVSD-GSGEINI 138
Query: 128 DDF 130
F
Sbjct: 139 KQF 141
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S + L F+ D++ G ISA EL+H L++ + E ++ + D G I +
Sbjct: 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVSD--GSGEINIK 139
Query: 63 DFGALW 68
F AL
Sbjct: 140 QFAALL 145
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 79 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Query: 128 DDFI 131
++F+
Sbjct: 139 EEFV 142
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +GFISA EL+H ++N E V MI D G + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 80 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Query: 128 DDFI 131
++F+
Sbjct: 140 EEFV 143
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +GFISA EL+H ++N E V MI D G + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 20 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 79 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Query: 128 DDFI 131
++F+
Sbjct: 139 EEFV 142
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +GFISA EL+H ++N E V MI D G + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D G I+ EL + + P E ++ MI D G+I F +F +
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +
Sbjct: 80 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNY 139
Query: 128 DDFI 131
++F+
Sbjct: 140 EEFV 143
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +GFISA EL+H ++N E V MI D G + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDEMIRESDIDGDGQVNYE 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 65 GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGT 124
G + + + F FD D SG ID EL A+ G+ I M+ D+ G GT
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 125 ILFDDFIQCCI-------TLYALTSAFRSYDTDQDGVIT 156
I F++F+Q + + AFR +D D+ G I+
Sbjct: 61 IDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKIS 99
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
P +E + + +D+D SG I +E ++ + E + +FD G I+F
Sbjct: 41 PKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISF 100
Query: 62 EDFGALWKYV------TDWQNCFRSFDRDNSGNIDKSE 93
++ + K + + Q DRD G +++ E
Sbjct: 101 KNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEE 138
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF---------- 64
D D G IS EL + P E + +I D+ G+I FE+F
Sbjct: 27 DADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE 85
Query: 65 GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGT 124
A K + NCFR FD++ G ID EL L G +++ I ++K D+ G
Sbjct: 86 DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGR 145
Query: 125 ILFDDFIQ 132
I FD+F++
Sbjct: 146 IDFDEFLK 153
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD D G+I EL + G + + ++++ D G GTI F+
Sbjct: 14 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 73
Query: 129 DFIQCCI----------TLYALTSAFRSYDTDQDGVITIH 158
+F+ + + L + FR +D + DG I I
Sbjct: 74 EFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIE 113
Score = 33.5 bits (75), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
S E L N F+ D++ GFI +EL L T E + ++ DK+N G I F
Sbjct: 90 KSEEELANCFRIFDKNADGFIDIEELGEIL-RATGEHVTEEDIEDLMKDSDKNNDGRIDF 148
Query: 62 EDFGALWKYV 71
++F + + V
Sbjct: 149 DEFLKMMEGV 158
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF---------- 64
D D G IS EL + P E + +I D+ G+I FE+F
Sbjct: 30 DADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE 88
Query: 65 GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGT 124
A K + NCFR FD++ G ID EL L G +++ I ++K D+ G
Sbjct: 89 DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGR 148
Query: 125 ILFDDFIQ 132
I FD+F++
Sbjct: 149 IDFDEFLK 156
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD D G+I EL + G + + ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 129 DFIQCCI----------TLYALTSAFRSYDTDQDGVITIH 158
+F+ + + L + FR +D + DG I I
Sbjct: 77 EFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIE 116
Score = 33.5 bits (75), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
S E L N F+ D++ GFI +EL L T E + ++ DK+N G I F
Sbjct: 93 KSEEELANCFRIFDKNADGFIDIEELGEIL-RATGEHVTEEDIEDLMKDSDKNNDGRIDF 151
Query: 62 EDFGALWKYV 71
++F + + V
Sbjct: 152 DEFLKMMEGV 161
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 4/143 (2%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPE--TVR--LMIGMFDKHNRGS 58
S + + FQ D+D G +S +EL AL + P N E T++ L FD +
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKT 62
Query: 59 ITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFD 118
+ + + + + FR+ D++ +G I ++EL L G L+ + ++K+
Sbjct: 63 VYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVS 122
Query: 119 RFGRGTILFDDFIQCCITLYALT 141
G G I ++ F+ +T Y L
Sbjct: 123 VSGDGAINYESFVDMLVTGYPLA 145
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 43/135 (31%)
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGT---------------------- 112
Q CF+ FD+DN G + EL +AL + G ++ + T
Sbjct: 8 QECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRKP 67
Query: 113 ----------MLKKF---DRFGRGTILFDDFIQCCITLY-ALTSA-----FRSYDTDQDG 153
ML F D+ G GTI + Q + L ALTS+ + DG
Sbjct: 68 IKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDG 127
Query: 154 VITIHYEQFLDMVFS 168
I+YE F+DM+ +
Sbjct: 128 A--INYESFVDMLVT 140
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF---------- 64
D D G IS EL + P E + +I D+ G+I FE+F
Sbjct: 30 DADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE 88
Query: 65 GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGT 124
A K + ++CFR FD++ G ID EL L G +++ I ++K D+ G
Sbjct: 89 DAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGR 148
Query: 125 ILFDDFIQ 132
I FD+F++
Sbjct: 149 IDFDEFLK 156
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD D G+I EL + G + + ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 129 DFIQCCI----------TLYALTSAFRSYDTDQDGVITIH 158
+F+ + + L FR +D + DG I I
Sbjct: 77 EFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIE 116
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
S E L + F+ D++ GFI +EL L T E + ++ DK+N G I F
Sbjct: 93 KSEEELEDCFRIFDKNADGFIDIEELGEIL-RATGEHVTEEDIEDLMKDSDKNNDGRIDF 151
Query: 62 EDFGALWKYV 71
++F + + V
Sbjct: 152 DEFLKMMEGV 161
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF---------- 64
D D G IS EL + P E + +I D+ G+I FE+F
Sbjct: 30 DADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE 88
Query: 65 GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGT 124
A K + NCFR FD++ G ID EL L G + + I ++K D+ G
Sbjct: 89 DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGR 148
Query: 125 ILFDDFIQ 132
I FD+F++
Sbjct: 149 IDFDEFLK 156
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD D G+I EL + G + + ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 129 DFIQCCI----------TLYALTSAFRSYDTDQDGVITIH 158
+F+ + + L + FR +D + DG I I
Sbjct: 77 EFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIE 116
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
S E L N F+ D++ GFI +EL L T E + ++ DK+N G I F
Sbjct: 93 KSEEELANCFRIFDKNADGFIDIEELGEIL-RATGEHVIEEDIEDLMKDSDKNNDGRIDF 151
Query: 62 EDFGALWKYV 71
++F + + V
Sbjct: 152 DEFLKMMEGV 161
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF---------- 64
D D G IS EL + P E + +I D+ G+I FE+F
Sbjct: 30 DADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE 88
Query: 65 GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGT 124
A K + +CFR FD++ G ID EL L G +++ I ++K D+ G
Sbjct: 89 DAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGR 148
Query: 125 ILFDDFIQ 132
I FD+F++
Sbjct: 149 IDFDEFLK 156
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD D G+I EL + G + + ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 129 DFIQCCI----------TLYALTSAFRSYDTDQDGVITIH 158
+F+ + + L FR +D + DG I I
Sbjct: 77 EFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIE 116
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
S E L + F+ D++ GFI +EL L T E + ++ DK+N G I F
Sbjct: 93 KSEEELADCFRIFDKNADGFIDIEELGEIL-RATGEHVTEEDIEDLMKDSDKNNDGRIDF 151
Query: 62 EDFGALWKYV 71
++F + + V
Sbjct: 152 DEFLKMMEGV 161
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 5 EFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF 64
E L F+ D+D+ G+I+ +L + + + P E + L + + G + F+DF
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELS-QQINMNLGGHVDFDDF 69
Query: 65 GALWKY-----------VTDWQNCFRSFDRDNSGNIDKSELSAALTT-FGYRLSDRMIGT 112
L V + ++ FR FD + G I SEL A+ G+++ R I
Sbjct: 70 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEE 129
Query: 113 MLKKFDRFGRGTILFDDFIQ 132
+++ D G G + F++F++
Sbjct: 130 IIRDVDLNGDGRVDFEEFVR 149
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + + + FR FD+D G I+ +L + T GY ++ + + ++ + G + FD
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Query: 129 DFIQC-----------CITLYALTSAFRSYDTDQDGVIT 156
DF++ I + L AFR +DT+ DG I+
Sbjct: 68 DFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEIS 106
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 5 EFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF 64
E L F+ D+D+ G+I+ +L + + + P E + L + + G + F+DF
Sbjct: 25 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELS-QQINMNLGGHVDFDDF 83
Query: 65 GALWKY-----------VTDWQNCFRSFDRDNSGNIDKSELSAALTT-FGYRLSDRMIGT 112
L V + ++ FR FD + G I SEL A+ G+++ R I
Sbjct: 84 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEE 143
Query: 113 MLKKFDRFGRGTILFDDFIQ 132
+++ D G G + F++F++
Sbjct: 144 IIRDVDLNGDGRVDFEEFVR 163
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 58 SITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKF 117
+++ +D + + + + FR FD+D G I+ +L + T GY ++ + + ++
Sbjct: 11 NLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQI 70
Query: 118 DRFGRGTILFDDFIQC-----------CITLYALTSAFRSYDTDQDGVIT 156
+ G + FDDF++ I + L AFR +DT+ DG I+
Sbjct: 71 NMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEIS 120
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 5 EFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF 64
E L F+ D+D+ G+I+ +L + + + P E + L + + G + F+DF
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELS-QQINMNLGGHVDFDDF 69
Query: 65 GALWKY-----------VTDWQNCFRSFDRDNSGNIDKSELSAALTT-FGYRLSDRMIGT 112
L V + ++ FR FD + G I SEL A+ G+++ R I
Sbjct: 70 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEE 129
Query: 113 MLKKFDRFGRGTILFDDFIQ 132
+++ D G G + F++F++
Sbjct: 130 IIRDVDLNGDGRVDFEEFVR 149
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + + + FR FD+D G I+ +L + T GY ++ + + ++ + G + FD
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Query: 129 DFIQC-----------CITLYALTSAFRSYDTDQDGVIT 156
DF++ I + L AFR +DT+ DG I+
Sbjct: 68 DFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEIS 106
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF---GALWKYV 71
D+D G I+ EL + P E ++ I D G+I F +F A
Sbjct: 20 DKDGDGTITTKELGTVXRSLGCNPTEAE-LQDXINEVDADGNGTINFPEFLTXXARCXKD 78
Query: 72 TDWQN----CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
TD + FR FD+D +G I +EL T G +L+D + +++ D G G + +
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNY 138
Query: 128 DDFIQ 132
++F+Q
Sbjct: 139 EEFVQ 143
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H +N E V I D G + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVXTN-LGEKLTDEEVDEXIREADIDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ + F+ FD+D +G I SEL + G +L+D + M+K+ D G G + +++F++
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 133 CCITL 137
+T+
Sbjct: 65 MMMTV 69
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
+ E L F+ D+D++G+ISA EL+H + N E V MI D G + +E
Sbjct: 2 AEEELKEAFKVFDKDQNGYISASELRHVMIN-LGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 63 DF 64
+F
Sbjct: 61 EF 62
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF---GALWKYV 71
D+D G I+ EL + P E ++ I D G+I F +F A
Sbjct: 20 DKDGDGTITTKELGTVXRSLGQNPTEAE-LQDXINEVDADGNGTIDFPEFLTXXARKXKD 78
Query: 72 TDWQN----CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
TD + FR FD+D +G I +EL T G +L+D + +++ D G G + +
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNY 138
Query: 128 DDFIQ 132
++F+Q
Sbjct: 139 EEFVQ 143
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H +N E V I D G + +E
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVXTN-LGEKLTDEEVDEXIREADIDGDGQVNYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF---GALWKYV 71
D+D G I+ EL + P E ++ I D G+I F +F A
Sbjct: 21 DKDGDGTITTKELGTVXRSLGQNPTEAE-LQDXINEVDADGNGTIDFPEFLTXXARKXKD 79
Query: 72 TDWQN----CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
TD + FR FD+D +G I +EL T G +L+D + +++ D G G + +
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNY 139
Query: 128 DDFIQ 132
++F+Q
Sbjct: 140 EEFVQ 144
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H +N E V I D G + +E
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVXTN-LGEKLTDEEVDQXIREADIDGDGQVNYE 140
Query: 63 DF 64
+F
Sbjct: 141 EF 142
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD+DN+G+I SEL+ + + G S+ + ++ + D G I F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 129 DF-------IQCCITLYALTSAFRSYDTDQDGVIT 156
+F ++ + L AF+ +D + DG+I+
Sbjct: 67 EFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLIS 101
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D +G IS+ EL + + +P E LM D I F +F AL
Sbjct: 20 DKDNNGSISSSELATVMRSLGLSPSEAEVNDLM-NEIDVDGNHQIEFSEFLALMSRQLKS 78
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSD 107
+ F+ FD++ G I +EL LT+ G +L+D
Sbjct: 79 NDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTD 118
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ + F+ FD+D +G I SEL + G +L+D + M+K+ D G G + +++F++
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 133 CCITL 137
+T+
Sbjct: 70 MMMTV 74
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
+ E L F+ D+D++G+ISA EL+H + N E V MI D G + +E
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMIN-LGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Query: 63 DF 64
+F
Sbjct: 66 EF 67
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD+DN+G+I SEL+ + + G S+ + ++ + D G I F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 129 DF-------IQCCITLYALTSAFRSYDTDQDGVIT 156
+F ++ + L AF+ +D + DG+I+
Sbjct: 67 EFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLIS 101
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D +G IS+ EL + + +P E LM D I F +F AL
Sbjct: 20 DKDNNGSISSSELATVMRSLGLSPSEAEVNDLM-NEIDVDGNHQIEFSEFLALMSRQLKS 78
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ F+ FD++ G I +EL LT+ G +L+D + ML++ G G I
Sbjct: 79 NDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSD-GSGEINI 137
Query: 128 DDF 130
F
Sbjct: 138 QQF 140
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G I +++F++
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 64
Query: 133 CCIT 136
+
Sbjct: 65 VMMA 68
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L F+ D+D++GFISA EL+H ++N E V MI D G I +E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 63 DF 64
+F
Sbjct: 61 EF 62
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +++F+Q
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 4 REFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFED 63
E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E+
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEE 59
Query: 64 F 64
F
Sbjct: 60 F 60
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +++F+Q
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 63 DF 64
+F
Sbjct: 62 EF 63
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +++F+Q
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 63 DF 64
+F
Sbjct: 62 EF 63
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD+DN+G+I SEL+ + + G S+ + ++ + D G I F
Sbjct: 8 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 67
Query: 129 DF-------IQCCITLYALTSAFRSYDTDQDGVIT 156
+F ++ + L AF+ +D + DG+I+
Sbjct: 68 EFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLIS 102
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK----- 69
D+D +G IS+ EL + + +P E LM D I F +F AL
Sbjct: 21 DKDNNGSISSSELATVMRSLGLSPSEAEVNDLM-NEIDVDGNHQIEFSEFLALMSRQLKS 79
Query: 70 --YVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ F+ FD++ G I +EL LT+ G +L+D + ML++ G G I
Sbjct: 80 NDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSD-GSGEINI 138
Query: 128 DDF 130
F
Sbjct: 139 QQF 141
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ FR FD+D +G I +EL +T G +L+D + M+++ D G G + +++F+Q
Sbjct: 9 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 66
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 63 DF 64
+F
Sbjct: 63 EF 64
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +++F+Q
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 68
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 63 DF 64
+F
Sbjct: 65 EF 66
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ + FR FD+D +G I +EL +T G +L+D + M+++ D G G + +++F+Q
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 69
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 63 DF 64
+F
Sbjct: 66 EF 67
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 9/133 (6%)
Query: 11 FQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF----GA 66
F+ D +R+GFI+ + LQ L P M D G I F +F G
Sbjct: 12 FELFDSERTGFITKEGLQTVLKQ-FGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGR 70
Query: 67 LWKYVTD---WQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRG 123
K T + FR+FD + +G I K+ L AL G RL L +G
Sbjct: 71 RMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL-GITETEKG 129
Query: 124 TILFDDFIQCCIT 136
I +D+FI T
Sbjct: 130 QIRYDNFINTMFT 142
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
V++++ F FD + +G I K L L FG R+ M + D G G I F +F
Sbjct: 5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEF 64
Query: 131 I-------QCCITLYALTSAFRSYDTDQDGVI 155
+ + + L AFR++D + G I
Sbjct: 65 LSMMGRRMKQTTSEDILRQAFRTFDPEGTGYI 96
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 14/101 (13%)
Query: 38 PFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV-------TDWQNCFRSFDRDNSGNID 90
PF+P T LM RG T + + + V + + F+ FDRD +G I
Sbjct: 2 PFHPVTAALMY-------RGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFIS 54
Query: 91 KSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFI 131
K EL A+ + GY ++ + ++++ D G G + F++F+
Sbjct: 55 KQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 5 EFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF 64
E + F+ DRD +GFIS EL A+ + + P N + ++I D G + FE+F
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMP-NEVELEVIIQRLDMDGDGQVDFEEF 94
Query: 65 GALW 68
L
Sbjct: 95 VTLL 98
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ FR FD+D +G I ++L +T G +L+D + M+++ D G G + ++DF+Q
Sbjct: 10 REAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQ 67
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA +L+H ++N E V MI D G + +E
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 63 DF 64
DF
Sbjct: 64 DF 65
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ + F FD D +G ID EL A+ G+ I M+ + D+ G G + F DF+
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 133 CCI-------TLYALTSAFRSYDTDQDGVIT 156
T + AF+ +D D+ G I+
Sbjct: 67 VMTQKMSEKDTKEEILKAFKLFDDDETGKIS 97
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 77 CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCIT 136
F+ FDRD +G I +EL +T G +L+D + M+++ D G G I +++F++ ++
Sbjct: 13 AFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 72
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L F+ DRD +G ISA EL+H ++N + V MI D G I +E
Sbjct: 6 SEEELIEAFKVFDRDGNGLISAAELRHVMTN-LGEKLTDDEVDEMIREADIDGDGHINYE 64
Query: 63 DF 64
+F
Sbjct: 65 EF 66
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGA 66
L +F+ +D D SG I+ DEL+ L + ++ ++ D G+I + +F A
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAADIDKSGTIDYGEFIA 70
Query: 67 LWKYVTDWQ------NCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRF 120
++ + + F FD+D SG I E+ A FG L D I M+K+ D+
Sbjct: 71 ATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQD 128
Query: 121 GRGTILFDDF 130
G I + +F
Sbjct: 129 NDGQIDYGEF 138
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 74 WQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQC 133
+ F+ D DNSG I EL L G L + I ++ D GTI + +FI
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 134 CITLYA------LTSAFRSYDTDQDGVITI 157
+ L L SAF +D D G IT+
Sbjct: 72 TVHLNKLEREENLVSAFSYFDKDGSGYITL 101
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 12/131 (9%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNIDKSELSAALTTFGY 103
M D N G+ITF++ K V ++ ++ + D D SG ID E AA
Sbjct: 18 MIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNK 77
Query: 104 RLSDRMIGTMLKKFDRFGRGTILFDDFIQCC----ITLYALTSAFRSYDTDQDGVITIHY 159
+ + + FD+ G G I D+ Q C + + + D D DG I Y
Sbjct: 78 LEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDG--QIDY 135
Query: 160 EQFLDMVFSLK 170
+F M+ K
Sbjct: 136 GEFAAMMRKRK 146
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 1 MPSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRL--MIGMFDKHNRGS 58
+ E L + F D+D SG+I+ DE+Q A + F + + + MI D+ N G
Sbjct: 78 LEREENLVSAFSYFDKDGSGYITLDEIQQACKD-----FGLDDIHIDDMIKEIDQDNDGQ 132
Query: 59 ITFEDFGALWK 69
I + +F A+ +
Sbjct: 133 IDYGEFAAMMR 143
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 77 CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF------ 130
F FD +N G +D EL A+ G+ L R I ++ ++D GR + +DDF
Sbjct: 28 AFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGE 87
Query: 131 -IQCCITLYALTSAFRSYDTDQDGVITI 157
I L + AF+ +D D G I+I
Sbjct: 88 KILKRDPLDEIKRAFQLFDDDHTGKISI 115
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 8/139 (5%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
++ ++ F D + GF+ EL+ A+ + E + L I +D R + ++
Sbjct: 21 QKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDL-IDEYDSEGRHLMKYD 79
Query: 63 DFGALW-------KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLK 115
DF + + + + F+ FD D++G I L G L+D + M++
Sbjct: 80 DFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIE 139
Query: 116 KFDRFGRGTILFDDFIQCC 134
+FD G G I ++FI C
Sbjct: 140 EFDLDGDGEINENEFIAIC 158
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 78 FRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCITL 137
FR DRD S ++D E L G L + +K+DR G GT+ ++F++
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPP 102
Query: 138 YA------LTSAFRSYDTDQDGVITI 157
+ + +AF D DGV+T+
Sbjct: 103 MSQAREAVIAAAFAKLDRSGDGVVTV 128
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 72 TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
+ + R +DR+ SG +D E AL + + +I K DR G G + DD
Sbjct: 73 AEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDL 131
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV------ 71
R G + A +L P N + +G K S+ FE+F ++ +
Sbjct: 22 RDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQG 79
Query: 72 --TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFD--RFGRGTILF 127
D+ F++FDR+ G I +EL LT G RLSD + ++K D G + +
Sbjct: 80 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 139
Query: 128 DDFIQ 132
+DF++
Sbjct: 140 EDFVK 144
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 14/77 (18%)
Query: 1 MPSREFLWNIFQGV-----------DRDRSGFISADELQHALSNGTWTPFNPETVRLMIG 49
+P+ E L + QG DR+ GFIS EL+H L+ + E V +I
Sbjct: 67 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLT-ALGERLSDEDVDEIIK 125
Query: 50 MFDKHN--RGSITFEDF 64
+ D G++ +EDF
Sbjct: 126 LTDLQEDLEGNVKYEDF 142
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV------ 71
R G + A +L P N + +G K S+ FE+F ++ +
Sbjct: 24 RDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQG 81
Query: 72 --TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFD--RFGRGTILF 127
D+ F++FDR+ G I +EL LT G RLSD + ++K D G + +
Sbjct: 82 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 141
Query: 128 DDFIQ 132
+DF++
Sbjct: 142 EDFVK 146
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 14/77 (18%)
Query: 1 MPSREFLWNIFQGV-----------DRDRSGFISADELQHALSNGTWTPFNPETVRLMIG 49
+P+ E L + QG DR+ GFIS EL+H L+ + E V +I
Sbjct: 69 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLT-ALGERLSDEDVDEIIK 127
Query: 50 MFDKHN--RGSITFEDF 64
+ D G++ +EDF
Sbjct: 128 LTDLQEDLEGNVKYEDF 144
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV------ 71
R G + A +L P N + +G K S+ FE+F ++ +
Sbjct: 24 RDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQG 81
Query: 72 --TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFG--RGTILF 127
D+ F++FDR+ G I +EL LT G RLSD + ++K D G + +
Sbjct: 82 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 141
Query: 128 DDFIQ 132
+DF++
Sbjct: 142 EDFVK 146
Score = 29.6 bits (65), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 14/77 (18%)
Query: 1 MPSREFLWNIFQGV-----------DRDRSGFISADELQHALSNGTWTPFNPETVRLMIG 49
+P+ E L + QG DR+ GFIS EL+H L+ + E V +I
Sbjct: 69 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLT-ALGERLSDEDVDEIIK 127
Query: 50 MFDKHN--RGSITFEDF 64
+ D G++ +EDF
Sbjct: 128 LTDLQEDLEGNVKYEDF 144
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV------ 71
R G + A +L P N + +G K S+ FE+F ++ +
Sbjct: 21 RDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQG 78
Query: 72 --TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFG--RGTILF 127
D+ F++FDR+ G I +EL LT G RLSD + ++K D G + +
Sbjct: 79 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 138
Query: 128 DDFIQ 132
+DF++
Sbjct: 139 EDFVK 143
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 14/77 (18%)
Query: 1 MPSREFLWNIFQGV-----------DRDRSGFISADELQHALSNGTWTPFNPETVRLMIG 49
+P+ E L + QG DR+ GFIS EL+H L+ + E V +I
Sbjct: 66 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLT-ALGERLSDEDVDEIIK 124
Query: 50 MFDKHN--RGSITFEDF 64
+ D G++ +EDF
Sbjct: 125 LTDLQEDLEGNVKYEDF 141
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV------ 71
R G + A +L P N + +G K S+ FE+F ++ +
Sbjct: 24 RDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQG 81
Query: 72 --TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFD--RFGRGTILF 127
D+ F++FDR+ G I +EL LT G RLSD + ++K D G + +
Sbjct: 82 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 141
Query: 128 DDFIQ 132
+DF++
Sbjct: 142 EDFVK 146
Score = 29.6 bits (65), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 14/77 (18%)
Query: 1 MPSREFLWNIFQGV-----------DRDRSGFISADELQHALSNGTWTPFNPETVRLMIG 49
+P+ E L + QG DR+ GFIS EL+H L+ + E V +I
Sbjct: 69 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLT-ALGERLSDEDVDEIIK 127
Query: 50 MFDKHN--RGSITFEDF 64
+ D G++ +EDF
Sbjct: 128 LTDLQEDLEGNVKYEDF 144
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV------ 71
R G + A +L P N + +G K S+ FE+F ++ +
Sbjct: 21 RDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQG 78
Query: 72 --TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFD--RFGRGTILF 127
D+ F++FDR+ G I +EL LT G RLSD + ++K D G + +
Sbjct: 79 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKY 138
Query: 128 DDFIQ 132
+DF++
Sbjct: 139 EDFVK 143
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 14/77 (18%)
Query: 1 MPSREFLWNIFQGV-----------DRDRSGFISADELQHALSNGTWTPFNPETVRLMIG 49
+P+ E L + QG DR+ GFIS EL+H L+ + E V +I
Sbjct: 66 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLT-ALGERLSDEDVDEIIK 124
Query: 50 MFDKHN--RGSITFEDF 64
+ D G++ +EDF
Sbjct: 125 LTDLQEDLEGNVKYEDF 141
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ + FR D+D +G I +EL +T G +L+D + M+++ D G G + +++F+Q
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 89
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ D+D +G+ISA EL+H ++N E V MI D G + +E
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 63 DF 64
+F
Sbjct: 86 EF 87
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGA 66
L F +D D+SG I+ +EL+ L E + L D N G+I +++F A
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAA-DVDNSGTIDYKEFIA 87
Query: 67 LWKYVTDWQN------CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRF 120
++ + F FD+D SG I EL A FG + D I + + D+
Sbjct: 88 ATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELXRDVDQD 145
Query: 121 GRGTILFDDFI 131
G I +++F+
Sbjct: 146 NDGRIDYNEFV 156
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
+ + F D D SG I EL A L G L + I + + D GTI + +F
Sbjct: 26 IAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEF 85
Query: 131 IQCCITLYALT------SAFRSYDTDQDGVIT 156
I + L + +AF +D D G IT
Sbjct: 86 IAATLHLNKIEREDHLFAAFTYFDKDGSGYIT 117
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 1 MPSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRL--MIGMFDKHNRGS 58
+ + L+ F D+D SG+I+ DELQ A F E VR+ + D+ N G
Sbjct: 95 IEREDHLFAAFTYFDKDGSGYITPDELQQA-----CEEFGVEDVRIEELXRDVDQDNDGR 149
Query: 59 ITFEDFGA 66
I + +F A
Sbjct: 150 IDYNEFVA 157
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV--- 71
D+D G I+ +L + + P E ++ MI G+I F F +
Sbjct: 321 DKDGDGGITTKQLGTVMRSLGQNPTEAE-LQDMINEVGADGNGTIDFPQFLTMMARKMKD 379
Query: 72 ----TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILF 127
+ + FR F +D +G I ++L +T G +L+D + M+++ G G + +
Sbjct: 380 TDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNY 439
Query: 128 DDFIQ 132
+ F+Q
Sbjct: 440 EQFVQ 444
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E + F+ +D +G+ISA +L+H ++N E V MI G + +E
Sbjct: 382 SEEEIREAFRVFGKDGNGYISAAQLRHVMTN-LGEKLTDEEVDEMIREAGIDGDGQVNYE 440
Query: 63 DF 64
F
Sbjct: 441 QF 442
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 77 CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF------ 130
F FD +N G +D EL A G+ L R I ++ ++D GR +DDF
Sbjct: 28 AFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYIVXGE 87
Query: 131 -IQCCITLYALTSAFRSYDTDQDGVITI 157
I L + AF+ +D D G I+I
Sbjct: 88 KILKRDPLDEIKRAFQLFDDDHTGKISI 115
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
++ ++ F D + GF+ EL+ A + E + L I +D R ++
Sbjct: 21 QKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDL-IDEYDSEGRHLXKYD 79
Query: 63 DF-----GALWKY--VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLK 115
DF + K + + + F+ FD D++G I L G L+D + ++
Sbjct: 80 DFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIE 139
Query: 116 KFDRFGRGTILFDDFIQCC 134
+FD G G I ++FI C
Sbjct: 140 EFDLDGDGEINENEFIAIC 158
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFI 131
+ + F FD + +G+ID EL A+ G+ + I ++ ++DR G G I FDDF+
Sbjct: 8 EIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFL 66
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 66 ALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTI 125
A K + NCFR FD++ G ID EL L G + + I ++K D+ G I
Sbjct: 4 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRI 63
Query: 126 LFDDFIQ 132
FD+F++
Sbjct: 64 DFDEFLK 70
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
S E L N F+ D++ GFI +EL L T E + ++ DK+N G I F
Sbjct: 7 KSEEELANCFRIFDKNADGFIDIEELGEILR-ATGEHVIEEDIEDLMKDSDKNNDGRIDF 65
Query: 62 EDFGALWKYV 71
++F + + V
Sbjct: 66 DEFLKMMEGV 75
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD+DN+G+I SEL+ + + G S+ + ++ + D G I F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 129 DFI 131
+F+
Sbjct: 67 EFL 69
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 48 IGMFDKHNRGSITFEDFGALWKYV--------TDWQNCFRSFDRDNSGNIDKSELSAALT 99
+G K S+ FE+F ++ + D+ F++FDR+ G I +EL L+
Sbjct: 52 VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLS 111
Query: 100 TFGYRLSDRMIGTM--LKKFDRFGRGTILFDDFIQCCIT 136
G RLSD + + L G + +++F++ +T
Sbjct: 112 GLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 150
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 1 MPSREFLWNIFQGV-----------DRDRSGFISADELQHALSNGTWTPFNPETVRLMIG 49
+P+ E L + QG DR+ GFIS EL+H LS G + E V +I
Sbjct: 69 LPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLS-GLGERLSDEEVDEIIN 127
Query: 50 MFDKHN--RGSITFEDF 64
+ D G++ +E+F
Sbjct: 128 LTDLQEDLEGNVKYEEF 144
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 48 IGMFDKHNRGSITFEDFGALWKYV--------TDWQNCFRSFDRDNSGNIDKSELSAALT 99
+G K S+ FE+F ++ + D+ F++FDR+ G I +EL L+
Sbjct: 53 VGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLS 112
Query: 100 TFGYRLSDRMIGTM--LKKFDRFGRGTILFDDFIQCCIT 136
G RLSD + + L G + +++F++ +T
Sbjct: 113 GLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMT 151
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 1 MPSREFLWNIFQGV-----------DRDRSGFISADELQHALSNGTWTPFNPETVRLMIG 49
+P+ E L + QG DR+ GFIS EL+H LS G + E V +I
Sbjct: 70 LPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLS-GLGERLSDEEVDEIIN 128
Query: 50 MFDKHN--RGSITFEDF 64
+ D G++ +E+F
Sbjct: 129 LTDLQEDLEGNVKYEEF 145
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 47 MIGMFDKHNRGSITFEDFGALWKYVTDWQN-----CFRSFDRDNSGNIDKSELSAALTTF 101
M F K N S + + +T+ Q F FD D +G ID EL A+
Sbjct: 1 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL 60
Query: 102 GYRLSDRMIGTMLKKFDRFGRGTILFDDFI 131
G+ I M+ + D+ G G + F DF+
Sbjct: 61 GFEPKKEEIKKMISEIDKEGTGKMNFGDFL 90
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + D++ F FD+D G I EL+ + + ++ + M+ + D G GTI FD
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Query: 129 DFI 131
+F+
Sbjct: 67 EFL 69
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + D++ F FD+D G I EL+ + + ++ + M+ + D G GTI FD
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Query: 129 DFI 131
+F+
Sbjct: 67 EFL 69
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD D G+I EL + G + + ++++ D G GTI F+
Sbjct: 14 EMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFE 73
Query: 129 DFIQCCI----------TLYALTSAFRSYDTDQDGVI 155
+F+ + + L FR +D + DG I
Sbjct: 74 EFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYI 110
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
S E L +F+ DR+ G+I A+EL + + E + ++ DK+N G I F
Sbjct: 90 KSEEELAELFRIFDRNADGYIDAEELAE-IFRASGEHVTDEEIESLMKDGDKNNDGRIDF 148
Query: 62 EDFGALWKYV 71
++F + + V
Sbjct: 149 DEFLKMMEGV 158
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSN----GTWTPFNPETVRLMIGMFDKHNRGS 58
S++ ++ F+ D D G I+ EL H L N G T + V+ MI DK+N G
Sbjct: 120 SKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGK 179
Query: 59 ITFEDFGALWK 69
I F +F + K
Sbjct: 180 IDFHEFSEMMK 190
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
V ++ F D D G I K +L L G +L +L + D G G I + +F
Sbjct: 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEF 109
Query: 131 IQCCITLYALTS-----AFRSYDTDQDGVIT 156
I + L+ AFR +D D DG IT
Sbjct: 110 IAAALDRKQLSKKLIYCAFRVFDVDNDGEIT 140
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 5 EFLWNIFQGVDRDRSGFISADELQHALS-NGTWTPFNPETVRLMIGMFDKHNRGSITFED 63
E L + F +D D G+I+ ++L+ L +G P+N + L++ D G I + +
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFD---LLLDQIDSDGSGKIDYTE 108
Query: 64 F--GALWKYVTDWQ---NCFRSFDRDNSGNIDKSELSAALTTFGYR--LSDR---MIGTM 113
F AL + + FR FD DN G I +EL+ L + ++ R + M
Sbjct: 109 FIAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRM 168
Query: 114 LKKFDRFGRGTILFDDF 130
++ D+ G I F +F
Sbjct: 169 IRDVDKNNDGKIDFHEF 185
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
V + F D + GNI K +L L G L +L + D G G I + +F
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPN-FDLLLDQIDSDGSGNIDYTEF 112
Query: 131 IQCCITLYALTS-----AFRSYDTDQDGVIT 156
+ I L+ AFR +D D DG IT
Sbjct: 113 LAAAIDRRQLSKKLIYCAFRVFDVDNDGEIT 143
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSN----GTWTPFNPETVRLMIGMFDKHNRGS 58
S++ ++ F+ D D G I+ EL H L N G T + V+ MI DK+ G
Sbjct: 123 SKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGK 182
Query: 59 ITFEDFGALWK 69
I F +F + K
Sbjct: 183 IDFYEFSEMMK 193
Score = 33.5 bits (75), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALS-NGTWTPFNPETVRLMIGMFDKHNRGSITFEDFG 65
L F +D + G I+ +L+ L +G P N + L++ D G+I + +F
Sbjct: 57 LKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFD---LLLDQIDSDGSGNIDYTEFL 113
Query: 66 ALW----KYVTDWQNC-FRSFDRDNSGNIDKSELSAALTTFGYR--LSDR---MIGTMLK 115
A + C FR FD DN G I +EL+ L R +++R + M++
Sbjct: 114 AAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIR 173
Query: 116 KFDRFGRGTILFDDF 130
+ D+ G G I F +F
Sbjct: 174 EVDKNGDGKIDFYEF 188
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 11 FQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKY 70
F +D++R GFI ++L L++ P T + GM + G I F F ++
Sbjct: 13 FNMIDQNRDGFIDKEDLHDMLASMGKNP----TDEYLEGMMSEA-PGPINFTMFLTMFGE 67
Query: 71 V---TDWQ----NCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKK 116
TD + N F FD + SG I + L LTT G R +D + M ++
Sbjct: 68 KLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 120
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 12/125 (9%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYV------ 71
R G + A +L P N + +G K S+ FE+F ++ +
Sbjct: 24 RDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQG 81
Query: 72 --TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTM--LKKFDRFGRGTILF 127
D+ F++FDR+ G I +EL L+ G RLSD + + L G + +
Sbjct: 82 TFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKY 141
Query: 128 DDFIQ 132
++F++
Sbjct: 142 EEFVK 146
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 1 MPSREFLWNIFQGV-----------DRDRSGFISADELQHALSNGTWTPFNPETVRLMIG 49
+P+ E L + QG DR+ GFIS EL+H LS G + E V +I
Sbjct: 69 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLS-GLGERLSDEEVDEIIN 127
Query: 50 MFDKHN--RGSITFEDF 64
+ D G++ +E+F
Sbjct: 128 LTDLQEDLEGNVKYEEF 144
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
D + F+ FD + G I SEL+ AL T G +D + M+ + D G G I F++FI
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFIS 62
Query: 133 CC 134
C
Sbjct: 63 FC 64
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
+ + +N F + D DNSG + E+ L GY+ I +L+ D G I + DF
Sbjct: 56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDF 115
Query: 131 IQCCITLYALTS------AFRSYDTDQDGVITIH 158
+ I F+ +D D +G I++
Sbjct: 116 LAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVE 149
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
D + F+ FD + G I SEL+ AL T G +D + M+ + D G G I F++FI
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFIS 61
Query: 133 CC 134
C
Sbjct: 62 FC 63
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 55 NRGSITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTML 114
NRG T+ED + FR FD++ +G + +EL LTT G ++++ + T+L
Sbjct: 80 NRGQGTYED----------YLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVL 129
Query: 115 KKFDRFGRGTILFDDFIQCCITL 137
+ G I ++ F++ +++
Sbjct: 130 AGHED-SNGCINYEAFLKHILSV 151
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
KY+ + F D +++G++ E+ L + G + D I +L+ D RG I +
Sbjct: 39 KYINE---LFYKLDTNHNGSLSHREIYTVLASVGIKKWD--INRILQALDINDRGNITYT 93
Query: 129 DFIQCC-----ITLYALTSAFRSYDTDQDGVIT 156
+F+ C I L +AF D D+DG I+
Sbjct: 94 EFMAGCYRWKNIESTFLKAAFNKIDKDEDGYIS 126
Score = 30.4 bits (67), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 5 EFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF 64
+++ +F +D + +G +S E+ L++ ++ + ++ D ++RG+IT+ +F
Sbjct: 39 KYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWD---INRILQALDINDRGNITYTEF 95
Query: 65 GA---LWKYV--TDWQNCFRSFDRDNSGNIDKSELSAAL 98
A WK + T + F D+D G I KS++ + +
Sbjct: 96 MAGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDIVSLV 134
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 27/131 (20%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
P+ E L + VD D SG + DE + +M+ ++G
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEF----------------LVMMVRCMKDDSKG---- 91
Query: 62 EDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFG 121
K + + FR FD++ G ID EL L G +++ I ++K D+
Sbjct: 92 -------KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 122 RGTILFDDFIQ 132
G I +D+F++
Sbjct: 145 DGRIDYDEFLE 155
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 15/109 (13%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFIQCCI----------TLYALTSAFRSYDTDQDGVITIH 158
G GT+ FD+F+ + T L+ FR +D + DG I +
Sbjct: 67 DGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLE 115
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 43 TVRLMIGMFDKHNRGSITFEDF---GA--LWKYVTDWQ------NCFRSFDRDNSGNIDK 91
T+R +I FD G I F+ F GA L + V Q FR +D++ +G I
Sbjct: 51 TIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYIST 110
Query: 92 SELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFI 131
+ L LS + M+ + D G GT+ F++F+
Sbjct: 111 DVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 74 WQNCFRSFDR-DNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF-- 130
+ FR F+ + SG + ++ L G + + I ++ +FD FG G I FD F
Sbjct: 15 LETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKI 74
Query: 131 ---------IQCCITLYALTSAFRSYDTDQDGVIT 156
+ L AFR YD + +G I+
Sbjct: 75 IGARFLGEEVNPEQMQQELREAFRLYDKEGNGYIS 109
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
+ D Q FR+FD+D G+I EL A+ G L + M+++ D G + +++F
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 5 EFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF 64
E L F+ D+D G I+ DEL+ A++ G P E + MI D G + +E+F
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMA-GLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 65 GALW 68
+
Sbjct: 65 ARML 68
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 27/131 (20%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
P+ E L + VD D SG + DE + +M+ ++G
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEF----------------LVMMVRSMKDDSKG---- 91
Query: 62 EDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFG 121
K + + FR FD++ G ID EL L G +++ I ++K D+
Sbjct: 92 -------KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 122 RGTILFDDFIQ 132
G I +D+F++
Sbjct: 145 DGRIDYDEFLE 155
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G+I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFIQCCI----------TLYALTSAFRSYDTDQDGVITIH 158
G GT+ FD+F+ + T L+ FR +D + DG I +
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLE 115
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 27/131 (20%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
P+ E L + VD D SG + DE + +M+ ++G
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEF----------------LVMMVRSMKDDSKG---- 91
Query: 62 EDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFG 121
K + + FR FD++ G ID EL L G +++ I ++K D+
Sbjct: 92 -------KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 122 RGTILFDDFIQ 132
G I +D+F++
Sbjct: 145 DGRIDYDEFLE 155
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G+I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFIQCCI----------TLYALTSAFRSYDTDQDGVITIH 158
G GT+ FD+F+ + + L+ FR +D + DG I +
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLE 115
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L ++F+ D++ G+I +EL+ L T + + ++ DK+N G I ++
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 63 DFGALWKYV 71
+F K V
Sbjct: 152 EFLEFMKGV 160
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD D G+I EL + G + + ++++ D G GTI F+
Sbjct: 6 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 65
Query: 129 DFIQCCI 135
+F+ +
Sbjct: 66 EFLVMMV 72
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD D G+I EL + G + + ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 129 DFIQCCI 135
+F+ +
Sbjct: 77 EFLVMMV 83
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTT-FGYRLSDRMIGTMLKKFDRFGRGTILFDD 129
V + ++ FR FD + G I SEL A+ G+++ R I +++ D G G + F++
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 130 FIQ 132
F++
Sbjct: 66 FVR 68
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
+ D + F+ FD + G I SEL AL T G D + M+ + D G G I FD+F
Sbjct: 10 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDE-VRRMMAEIDTDGDGFISFDEF 68
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 1 MPSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSIT 60
+ SRE L FQ D D SG I+ +EL T + ET ++ DK+N G +
Sbjct: 119 LLSRERLLAAFQQFDSDGSGKITNEELGRLFG---VTEVDDETWHQVLQECDKNNDGEVD 175
Query: 61 FEDFGALWKYVTD 73
FE+F + + + D
Sbjct: 176 FEEFVEMMQKICD 188
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 9 NIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW 68
+I Q VD DR+G+I E + + E + FD G IT E+ G L+
Sbjct: 91 HILQSVDFDRNGYIEYSEFVTVCMDKQLL-LSRERLLAAFQQFDSDGSGKITNEELGRLF 149
Query: 69 KYVTD-----WQNCFRSFDRDNSGNID 90
VT+ W + D++N G +D
Sbjct: 150 G-VTEVDDETWHQVLQECDKNNDGEVD 175
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 17/96 (17%)
Query: 78 FRSFDRDNSGNIDKSELSAALTTF----GYRLSD-------RMIGTMLKKFDRFGRGTIL 126
FR D + G +D+ EL G +SD + +L+ D G I
Sbjct: 46 FRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIE 105
Query: 127 FDDFIQCC------ITLYALTSAFRSYDTDQDGVIT 156
+ +F+ C ++ L +AF+ +D+D G IT
Sbjct: 106 YSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKIT 141
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + ++++ F FD++ +G I EL + T G ++ + ++ + + G + F
Sbjct: 7 EQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFT 66
Query: 129 DFIQCCI---------TLYALTSAFRSYDTDQDGVITIHYEQFLDMVFSLKI 171
+F C I T + AF+ +D D DG I+ +F+ + K+
Sbjct: 67 EF--CGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKV 116
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
+ E + F+ DRD GFIS EL+ + N E + MI D G I +E
Sbjct: 81 TEEEMREAFKIFDRDGDGFISPAELRFVMIN-LGEKVTDEEIDEMIREADFDGDGMINYE 139
Query: 63 DF 64
+F
Sbjct: 140 EF 141
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 12/139 (8%)
Query: 9 NIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW 68
+IF D+ G I+ D L L + P N ++ + S+T + L
Sbjct: 8 DIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLI 67
Query: 69 KY------------VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKK 116
+ D+ F+ FD++++G + +L LT G +L+D + +LK
Sbjct: 68 EVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKG 127
Query: 117 FDRFGRGTILFDDFIQCCI 135
+ G I + FI+ +
Sbjct: 128 VEVDSNGEIDYKKFIEDVL 146
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMI-GTMLKKFDRFGRGTILFDDFIQC 133
+ FR FD DNSG I +EL+ T FG D ++L + D+ G + FD+F Q
Sbjct: 421 ERAFRXFDSDNSGKISSTELA---TIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQX 477
Query: 134 CITL 137
+ L
Sbjct: 478 LLKL 481
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
SRE L F+ D D SG IS+ EL + + ET + ++ DK+N G + F+
Sbjct: 416 SRERLERAFRXFDSDNSGKISSTELATIFG---VSDVDSETWKSVLSEVDKNNDGEVDFD 472
Query: 63 DF 64
+F
Sbjct: 473 EF 474
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 9 NIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW 68
+ VD D++G+I E ++ T + E + FD N G I+ + ++
Sbjct: 386 QVLDAVDFDKNGYIEYSEFV-TVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIF 444
Query: 69 KYVTD-----WQNCFRSFDRDNSGNIDKSELSAAL 98
V+D W++ D++N G +D E L
Sbjct: 445 G-VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 21/119 (17%)
Query: 1 MPSREFLWNIFQGVDRDRSGFISADELQHAL------SNGTWTPFN-PETVRLMIGMFDK 53
+ S E ++ D D SGFI +EL++ L +N T E LM+ +FD
Sbjct: 99 LKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDS 158
Query: 54 HNRGSITFEDFGALWKYV--------------TDWQNCFRSFDRDNSGNIDKSELSAAL 98
+N G + + L ++ F +D+D +G ID++EL A L
Sbjct: 159 NNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALL 217
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 52 DKHNRGSITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIG 111
DKH ++ E+ G L + F+ D DNSG I EL L G L + I
Sbjct: 10 DKHMAERLSEEEIGGL-------KELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIK 62
Query: 112 TMLKKFDRFGRGTILFDDFIQCCI 135
++ D GTI + +FI +
Sbjct: 63 DLMDAADIDKSGTIDYGEFIAATV 86
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNIDKSELSAA 97
M D N G+ITF++ K V ++ ++ + D D SG ID E AA
Sbjct: 31 MIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 84
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 1 MPSREFLWNIFQGVDRDRSGFISADELQHALS--NGTWTPFNPETVRLMIGMFDKHNRGS 58
M S + + +F +D+D+SGFI DEL L + + + + ++ DK G
Sbjct: 1 MKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGK 60
Query: 59 ITFEDFGAL 67
I E+F L
Sbjct: 61 IGVEEFSTL 69
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMI-GTMLKKFDRFGRGTILFDDFIQC 133
+ FR FD DNSG I +EL+ T FG D ++L + D+ G + FD+F Q
Sbjct: 421 ERAFRMFDSDNSGKISSTELA---TIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQM 477
Query: 134 CITL 137
+ L
Sbjct: 478 LLKL 481
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 9 NIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW 68
+ VD D++G+I E ++ T + E + MFD N G I+ + ++
Sbjct: 386 QVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF 444
Query: 69 KYVTD-----WQNCFRSFDRDNSGNIDKSELSAAL 98
V+D W++ D++N G +D E L
Sbjct: 445 G-VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
SRE L F+ D D SG IS+ EL + + ET + ++ DK+N G + F+
Sbjct: 416 SRERLERAFRMFDSDNSGKISSTELATIFG---VSDVDSETWKSVLSEVDKNNDGEVDFD 472
Query: 63 DF 64
+F
Sbjct: 473 EF 474
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMI-GTMLKKFDRFGRGTILFDDFIQC 133
+ FR FD DNSG I +EL+ T FG D ++L + D+ G + FD+F Q
Sbjct: 444 ERAFRMFDSDNSGKISSTELA---TIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQM 500
Query: 134 CITL 137
+ L
Sbjct: 501 LLKL 504
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 9 NIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW 68
+ VD D++G+I E ++ T + E + MFD N G I+ + ++
Sbjct: 409 QVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF 467
Query: 69 KYVTD-----WQNCFRSFDRDNSGNIDKSELSAAL 98
V+D W++ D++N G +D E L
Sbjct: 468 G-VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
SRE L F+ D D SG IS+ EL + + ET + ++ DK+N G + F+
Sbjct: 439 SRERLERAFRMFDSDNSGKISSTELATIFG---VSDVDSETWKSVLSEVDKNNDGEVDFD 495
Query: 63 DF 64
+F
Sbjct: 496 EF 497
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMI-GTMLKKFDRFGRGTILFDDFIQC 133
+ FR FD DNSG I +EL+ T FG D ++L + D+ G + FD+F Q
Sbjct: 445 ERAFRMFDSDNSGKISSTELA---TIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQM 501
Query: 134 CITL 137
+ L
Sbjct: 502 LLKL 505
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 9 NIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW 68
+ VD D++G+I E ++ T + E + MFD N G I+ + ++
Sbjct: 410 QVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF 468
Query: 69 KYVTD-----WQNCFRSFDRDNSGNIDKSELSAAL 98
V+D W++ D++N G +D E L
Sbjct: 469 G-VSDVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
SRE L F+ D D SG IS+ EL + + ET + ++ DK+N G + F+
Sbjct: 440 SRERLERAFRMFDSDNSGKISSTELATIFG---VSDVDSETWKSVLSEVDKNNDGEVDFD 496
Query: 63 DF 64
+F
Sbjct: 497 EF 498
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTF---GYRLSDRMIGTMLKKFDRFGRGTILF 127
D + F++ D D SG I++ EL L +F G L+D LK D+ G G I
Sbjct: 41 ANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGI 100
Query: 128 DDF 130
D+F
Sbjct: 101 DEF 103
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALSN--GTWTPFNPETVRLMIGMFDKHNRGSITFEDF 64
+ +F+ +D D SGFI +EL+ L + + + DK G I ++F
Sbjct: 44 VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
Query: 65 GAL 67
L
Sbjct: 104 ETL 106
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
SRE L FQ D D SG I+ +EL T + ET ++ DK+N G + FE
Sbjct: 395 SRERLLAAFQQFDSDGSGKITNEELGRLFG---VTEVDDETWHQVLQECDKNNDGEVDFE 451
Query: 63 DFGALWKYVTD 73
+F + + + D
Sbjct: 452 EFVEMMQKICD 462
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 9 NIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALW 68
+I Q VD DR+G+I E + + E + FD G IT E+ G L+
Sbjct: 365 HILQSVDFDRNGYIEYSEFVTVCMDKQLL-LSRERLLAAFQQFDSDGSGKITNEELGRLF 423
Query: 69 KYVTD-----WQNCFRSFDRDNSGNID 90
VT+ W + D++N G +D
Sbjct: 424 G-VTEVDDETWHQVLQECDKNNDGEVD 449
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 17/96 (17%)
Query: 78 FRSFDRDNSGNIDKSELSAALTTF----GYRLSD-------RMIGTMLKKFDRFGRGTIL 126
FR D + G +D+ EL G +SD + +L+ D G I
Sbjct: 320 FRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIE 379
Query: 127 FDDFIQCC------ITLYALTSAFRSYDTDQDGVIT 156
+ +F+ C ++ L +AF+ +D+D G IT
Sbjct: 380 YSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKIT 415
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
D+ F+ FD++++G + +L LT G +L+D + +LK + G I + FI+
Sbjct: 6 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 65
Query: 133 CCI 135
+
Sbjct: 66 DVL 68
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF 64
D D SG I A EL+ A+ + P E ++ MI DK G+I FE+F
Sbjct: 40 DTDGSGTIDAKELKVAMRALGFEP-KKEEIKKMISEIDKDGSGTIDFEEF 88
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 78 FRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCIT 136
F+ FD+D +G I EL LT+ G +LS+ + +LK G + + DF+Q +
Sbjct: 82 FQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV-PVKDGMVNYHDFVQMILA 139
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF-- 64
L F+ +D D SG +S +E +L P V+ +I +FD G + F++F
Sbjct: 22 LGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPL----VQRVIDIFDTDGNGEVDFKEFIE 76
Query: 65 -GALWKYVTDWQN----CFRSFDRDNSGNIDKSELSAALTTF-GYRLSDRMIGTMLKK-- 116
+ + D + FR +D D G I EL L G L D + ++ K
Sbjct: 77 GVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 136
Query: 117 --FDRFGRGTILFDDFIQCCIT 136
D+ G G I F++F C +
Sbjct: 137 INADKDGDGRISFEEF--CAVV 156
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 78 FRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCITL 137
F+ D DNSG++ E + L R+I FD G G + F +FI+
Sbjct: 26 FKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDI----FDTDGNGEVDFKEFIEGVSQF 81
Query: 138 -------YALTSAFRSYDTDQDGVIT 156
L AFR YD D+DG I+
Sbjct: 82 SVKGDKEQKLRFAFRIYDMDKDGYIS 107
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF-- 64
L F+ +D D SG +S +E +L P V+ +I +FD G + F++F
Sbjct: 23 LGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPL----VQRVIDIFDTDGNGEVDFKEFIE 77
Query: 65 -GALWKYVTDWQN----CFRSFDRDNSGNIDKSELSAALTTF-GYRLSDRMIGTMLKK-- 116
+ + D + FR +D D G I EL L G L D + ++ K
Sbjct: 78 GVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 137
Query: 117 --FDRFGRGTILFDDFIQCCIT 136
D+ G G I F++F C +
Sbjct: 138 INADKDGDGRISFEEF--CAVV 157
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 78 FRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCITL 137
F+ D DNSG++ E + L R+I FD G G + F +FI+
Sbjct: 27 FKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDI----FDTDGNGEVDFKEFIEGVSQF 82
Query: 138 -------YALTSAFRSYDTDQDGVIT 156
L AFR YD D+DG I+
Sbjct: 83 SVKGDKEQKLRFAFRIYDMDKDGYIS 108
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF-- 64
L F+ +D D SG +S +E +L P V+ +I +FD G + F++F
Sbjct: 9 LGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL----VQRVIDIFDTDGNGEVDFKEFIE 63
Query: 65 -GALWKYVTDWQN----CFRSFDRDNSGNIDKSELSAALTTF-GYRLSDRMIGTMLKK-- 116
+ + D + FR +D D G I EL L G L D + ++ K
Sbjct: 64 GVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 123
Query: 117 --FDRFGRGTILFDDFIQCCIT 136
D+ G G I F++F C +
Sbjct: 124 INADKDGDGRISFEEF--CAVV 143
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 78 FRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCITL 137
F+ D DNSG++ E + L R+I FD G G + F +FI+
Sbjct: 13 FKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDI----FDTDGNGEVDFKEFIEGVSQF 68
Query: 138 -------YALTSAFRSYDTDQDGVIT 156
L AFR YD D+DG I+
Sbjct: 69 SVKGDKEQKLRFAFRIYDMDKDGYIS 94
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF-- 64
L F+ +D D SG +S +E +L P V+ +I +FD G + F++F
Sbjct: 8 LGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPL----VQRVIDIFDTDGNGEVDFKEFIE 62
Query: 65 -GALWKYVTDWQN----CFRSFDRDNSGNIDKSELSAALTTF-GYRLSDRMIGTMLKK-- 116
+ + D + FR +D D G I EL L G L D + ++ K
Sbjct: 63 GVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 122
Query: 117 --FDRFGRGTILFDDFIQCCIT 136
D+ G G I F++F C +
Sbjct: 123 INADKDGDGRISFEEF--CAVV 142
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 78 FRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCITL 137
F+ D DNSG++ E + L R+I FD G G + F +FI+
Sbjct: 12 FKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDI----FDTDGNGEVDFKEFIEGVSQF 67
Query: 138 -------YALTSAFRSYDTDQDGVIT 156
L AFR YD D+DG I+
Sbjct: 68 SVKGDKEQKLRFAFRIYDMDKDGYIS 93
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 32/67 (47%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD D G+I L + G + + ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 129 DFIQCCI 135
+F+ +
Sbjct: 77 EFLVMMV 83
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 11 FQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIG-MFDKHNRGSITFEDFGALWK 69
FQ DR G I + + P N E ++++ D+ N ++ FE F + +
Sbjct: 13 FQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLPMMQ 72
Query: 70 YVTDW--QNCF-------RSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRF 120
+ Q CF R FD++ +G + +E+ L T G ++++ + ++ +
Sbjct: 73 TIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHED- 131
Query: 121 GRGTILFDDFIQCCIT 136
G I +++ ++ ++
Sbjct: 132 SNGCINYEELVRMVLS 147
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 27/131 (20%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
P+ E L + VD D SG + DE + +M+ ++G
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEF----------------LVMMVRSMKDDSKG---- 91
Query: 62 EDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFG 121
K + + FR +D++ G ID EL L G +++ I ++K D+
Sbjct: 92 -------KSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 122 RGTILFDDFIQ 132
G I +D+F++
Sbjct: 145 DGRIDYDEFLE 155
Score = 33.1 bits (74), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 15/108 (13%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G+I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFIQCCI----------TLYALTSAFRSYDTDQDGVITI 157
G GT+ FD+F+ + + L+ FR +D + DG I +
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDL 114
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 27/131 (20%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
P+ E L + VD D SG + DE + +M+ ++G
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEF----------------LVMMVRSMKDDSKG---- 91
Query: 62 EDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFG 121
K + + FR FD++ G ID EL L G +++ I ++K D+
Sbjct: 92 -------KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 122 RGTILFDDFIQ 132
G I +D++++
Sbjct: 145 DGRIDYDEWLE 155
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 15/108 (13%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G+I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFIQCCI----------TLYALTSAFRSYDTDQDGVITI 157
G GT+ FD+F+ + + L+ FR +D + DG I +
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDL 114
Score = 29.6 bits (65), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L ++F+ D++ G+I DEL+ L T + + ++ DK+N G I ++
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 63 DFGALWKYV 71
++ K V
Sbjct: 152 EWLEFMKGV 160
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 27/131 (20%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
P+ E L + VD D SG + DE + +M+ ++G
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEF----------------LVMMVRSMKDDSKG---- 91
Query: 62 EDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFG 121
K + + FR D++ G ID EL L G +++ I ++K D+
Sbjct: 92 -------KSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 122 RGTILFDDFIQ 132
G I +D+F++
Sbjct: 145 DGRIDYDEFLE 155
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 15/108 (13%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G+I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFIQCCI----------TLYALTSAFRSYDTDQDGVITI 157
G GT+ FD+F+ + + L+ FR D + DG I +
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDL 114
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 27/131 (20%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
P+ E L + VD D SG + DE + +M+ ++G
Sbjct: 52 PTPEELQEMIDEVDEDGSGTVDFDEF----------------LVMMVRSMKDDSKG---- 91
Query: 62 EDFGALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFG 121
K + + FR FD++ G ID EL L G +++ I ++K D+
Sbjct: 92 -------KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 122 RGTILFDDFIQ 132
G I +D+ ++
Sbjct: 145 DGRIDYDEXLE 155
Score = 33.9 bits (76), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 15/108 (13%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G+I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFIQCCI----------TLYALTSAFRSYDTDQDGVITI 157
G GT+ FD+F+ + + L+ FR +D + DG I +
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDL 114
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
S E L ++F+ D++ G+I DEL+ L T + + ++ DK+N G I ++
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 63 DFGALWKYV 71
+ K V
Sbjct: 152 EXLEFMKGV 160
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 60/136 (44%), Gaps = 11/136 (8%)
Query: 11 FQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIG-MFDKHNRGSITFEDFGALWK 69
FQ DR G I + + P N E ++++ D+ N ++ FE F + +
Sbjct: 15 FQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLPMMQ 74
Query: 70 YVTDW--QNCF-------RSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRF 120
+ Q CF R FD++ +G + +E+ L T G ++++ + ++ +
Sbjct: 75 TIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHED- 133
Query: 121 GRGTILFDDFIQCCIT 136
G I +++ ++ ++
Sbjct: 134 SNGCINYEELVRMVLS 149
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALS--NGTWTPFNPETVRLMIGMFDKHNRGSI 59
S + + +F +D+D+SGFI DEL L + + + + ++ DK G I
Sbjct: 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKI 97
Query: 60 TFEDFGAL 67
E+F L
Sbjct: 98 GVEEFSTL 105
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALS--NGTWTPFNPETVRLMIGMFDKHNRGSI 59
S + + +F +D+D+SGFI DEL L + + + + ++ DK G I
Sbjct: 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKI 97
Query: 60 TFEDFGAL 67
E+F L
Sbjct: 98 EVEEFSTL 105
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
+ + + FR FD+D G I+ +L + T GY ++ + + ++ + G + FDDF
Sbjct: 9 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 68
Query: 131 IQ 132
++
Sbjct: 69 VE 70
>pdb|2I7A|A Chain A, Domain Iv Of Human Calpain 13
Length = 174
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 13/153 (8%)
Query: 18 RSGFISADELQHALSNGTWTP-----FNPETVRLMIGMFDKHNRGSITFEDFGALWKYVT 72
R I A +LQ L+ T F+ + R ++ + + G + E+F LWK +
Sbjct: 17 RGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRLV 76
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAAL--TTF--GYRLSDRMIGTM-LKKFDRFGRGTILF 127
+Q+ F+ + + G + S+L A+ T F G +S ++ + L+ D GR + F
Sbjct: 77 HYQHVFQKV-QTSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYSDSVGR--VSF 133
Query: 128 DDFIQCCITLYALTSAFRSYDTDQDGVITIHYE 160
+ + L A+ FR+ D G+ E
Sbjct: 134 PSLVCFLMRLEAMAKTFRNLSKDGKGLYLTEME 166
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHA-----LSNGTWTPFNPETVRLMIGMFDKHNRG 57
S++ L + FQ D+D +G IS DEL L + TW + MI D +N G
Sbjct: 141 SKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTW--------KEMISGIDSNNDG 192
Query: 58 SITFEDF 64
+ FE+F
Sbjct: 193 DVDFEEF 199
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKH--NRGSITFEDFGALWKYVT 72
DR I+A ++ P N E + ++G K N +ITFE+F + +
Sbjct: 18 DRTGDAKITASQVGDIARALGQNPTNAE-INKILGNPSKEEMNAAAITFEEFLPMLQAAA 76
Query: 73 ---------DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRG 123
D+ R FD++ +G + +EL L T G ++++ + ++K + G
Sbjct: 77 NNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQED-SNG 135
Query: 124 TILFDDFIQCCITL 137
I ++ F++ +++
Sbjct: 136 CINYEAFVKHIMSV 149
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 15 DRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKH--NRGSITFEDFGALWKYVT 72
DR I+A ++ P N E + ++G K N +ITFE+F + +
Sbjct: 16 DRTGDAKITASQVGDIARALGQNPTNAE-INKILGNPSKEEMNAAAITFEEFLPMLQAAA 74
Query: 73 ---------DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRG 123
D+ R FD++ +G + +EL L T G ++++ + ++K + G
Sbjct: 75 NNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQED-SNG 133
Query: 124 TILFDDFIQCCITL 137
I ++ F++ +++
Sbjct: 134 CINYEAFVKHIMSV 147
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHA-----LSNGTWTPFNPETVRLMIGMFDKHNRG 57
S++ L + FQ D+D +G IS DEL L + TW + MI D +N G
Sbjct: 424 SKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTW--------KEMISGIDSNNDG 475
Query: 58 SITFEDF 64
+ FE+F
Sbjct: 476 DVDFEEF 482
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFD 128
+ + +++ F FD D G+I EL + G + + ++ + D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFE 76
Query: 129 DFI 131
+F+
Sbjct: 77 EFL 79
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 36 WTPFNPETVR----LMIGMFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDN 85
W P +R + +FDK G+IT +++ A K D + FR D DN
Sbjct: 103 WARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDN 162
Query: 86 SGNIDKSELSAALTTFGYRLSDRMIG 111
SG++D E++ F Y L G
Sbjct: 163 SGDLDVDEMTRQHLGFWYTLDPEADG 188
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALS--NGTWTPFNPETVRLMIGMFDKHNRGSI 59
S + + +F +D+D+SGFI DEL L + + + + ++ DK G I
Sbjct: 38 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKI 97
Query: 60 TFEDFGAL 67
E+F L
Sbjct: 98 GVEEFSTL 105
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 36 WTPFNPETVR----LMIGMFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDN 85
W P +R + +FDK G+IT +++ A K D + FR D DN
Sbjct: 103 WARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDN 162
Query: 86 SGNIDKSELSAALTTFGYRLSDRMIG 111
SG++D E++ F Y L G
Sbjct: 163 SGDLDVDEMTRQHLGFWYTLDPEADG 188
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 36 WTPFNPETVR----LMIGMFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDN 85
W P +R + +FDK G+IT +++ A K D + FR D DN
Sbjct: 103 WARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDN 162
Query: 86 SGNIDKSELSAALTTFGYRLSDRMIG 111
SG++D E++ F Y L G
Sbjct: 163 SGDLDVDEMTRQHLGFWYTLDPEADG 188
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ + F FD D +G ID EL A G+ I + + D+ G G F DF+
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLT 91
Query: 133 CCI-------TLYALTSAFRSYDTDQDGVIT 156
T + AF+ +D D+ G I+
Sbjct: 92 VXTQKXSEKDTKEEILKAFKLFDDDETGKIS 122
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 33.5 bits (75), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 81 FDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTI----LFDDFIQC--C 134
D D SG+I+ SE A+ LS + K FD+ G G I LF F Q
Sbjct: 390 LDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSS 449
Query: 135 ITLYALTSAFRSYDTDQDGVITIHYEQFLDMV 166
I + L S D ++DG + + +F++M+
Sbjct: 450 IQMEELESIIEQVDNNKDG--EVDFNEFVEML 479
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 21/146 (14%)
Query: 7 LWNIFQGVDRDRSGFISADEL--------------QHALSNGTWTPFNPETVRLMIGMFD 52
L IF+ +D + G + DEL ++L + + LM + D
Sbjct: 333 LTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLM-PLLD 391
Query: 53 KHNRGSITFEDFGA------LWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLS 106
GSI + +F A + + F+ FD+D SG I EL + +
Sbjct: 392 MDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQ 451
Query: 107 DRMIGTMLKKFDRFGRGTILFDDFIQ 132
+ +++++ D G + F++F++
Sbjct: 452 MEELESIIEQVDNNKDGEVDFNEFVE 477
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 22/100 (22%)
Query: 78 FRSFDRDNSGNIDKSELSAALTTF---------------GYRLSDRMIGTMLKKFDRFGR 122
FR D +N G +D+ EL F G + D+ I +++ D G
Sbjct: 337 FRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQ-IDSLMPLLDMDGS 395
Query: 123 GTILFDDFIQCCITLYALTS------AFRSYDTDQDGVIT 156
G+I + +FI I L S AF+ +D D G I+
Sbjct: 396 GSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKIS 435
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFE 62
SRE + F+ D+D SG IS EL S + E + +I D + G + F
Sbjct: 415 SRERMERAFKMFDKDGSGKISTKELFKLFSQAD-SSIQMEELESIIEQVDNNKDGEVDFN 473
Query: 63 DFGALWK 69
+F + +
Sbjct: 474 EFVEMLQ 480
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSNGTWTP----FNPETVRLMIGMFDKHNRGS 58
S + + +F +D+D+SGFI DEL L ++P + + ++++ DK G
Sbjct: 40 SADDVKKVFHMLDKDKSGFIEEDELGFILKG--FSPDARDLSAKETKMLMAAGDKDGDGK 97
Query: 59 ITFEDFGAL 67
I ++F L
Sbjct: 98 IGVDEFSTL 106
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 33.1 bits (74), Expect = 0.084, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 71 VTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
+ +++ F FDR +G +D + A L + GY + + ++ D G + F F
Sbjct: 724 MNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAF 783
Query: 131 I 131
I
Sbjct: 784 I 784
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 33.1 bits (74), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
S E L ++F+ D++ G+I DEL+ L T + + ++ DK+N G I +
Sbjct: 3 KSEEELSDLFRMFDKNADGYIDLDELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDY 61
Query: 62 EDFGALWKYV 71
++F K V
Sbjct: 62 DEFLEFMKGV 71
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 33.1 bits (74), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 77 CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQC 133
FR FD DNSG I +L G L++ + M+ + DR I D+FI+
Sbjct: 14 AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI 70
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 36 WTPFNPETVR----LMIGMFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDN 85
W P +R + +FDK G+IT +++ A K D + FR D DN
Sbjct: 103 WARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDN 162
Query: 86 SGNIDKSELSAALTTFGYRLSDRMIG 111
+G++D E++ F Y L G
Sbjct: 163 AGDLDVDEMTRQHLGFWYTLDPEADG 188
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Query: 36 WTPFNPETVRLMIGMFDKH--NRGSITFEDFGALWKYVT---------DWQNCFRSFDRD 84
P N E + ++G K N ITFE+F + + D+ R FD++
Sbjct: 35 QNPTNAE-INKILGNPSKEEMNAKKITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKE 93
Query: 85 NSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCITL 137
+G + +EL L T G ++++ + ++K + G I ++ F++ +++
Sbjct: 94 GNGTVMGAELRHVLATLGEKMTEEEVEELMKGQED-SNGCINYEAFVKHIMSV 145
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALSNGTWTP--FNPETVRLMIGMFDKHNRGSITFEDF 64
+ +F +D+D+SGFI +ELQ L N + + + + D G I E+F
Sbjct: 43 IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 102
Query: 65 GALWK 69
+L K
Sbjct: 103 QSLVK 107
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 72 TDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
+ + F+ FD + G I +EL AL T G D + M+ + D G G I F +F
Sbjct: 9 AERERIFKRFDANGDGKISAAELGEALKTLGSITPDE-VKHMMAEIDTDGDGFISFQEF 66
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 10 IFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF 64
IF+ D + G ISA EL AL T P+ V+ M+ D G I+F++F
Sbjct: 14 IFKRFDANGDGKISAAELGEALK--TLGSITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALSNGTWTP--FNPETVRLMIGMFDKHNRGSITFEDF 64
+ +F +D+D+SGFI +ELQ L N + + + + D G I E+F
Sbjct: 44 IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 103
Query: 65 GALWK 69
+L K
Sbjct: 104 QSLVK 108
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 36 WTPFNPETVR----LMIGMFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDN 85
W P +R + +FDK G+IT +++ A K D + FR D D+
Sbjct: 103 WARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDD 162
Query: 86 SGNIDKSELSAALTTFGYRLSDRMIG 111
SG++D E++ F Y L G
Sbjct: 163 SGDLDVDEMTRQHLGFWYTLDPEADG 188
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 18/136 (13%)
Query: 11 FQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF------ 64
F +D++ G I D+L+ + E + MI K G I F F
Sbjct: 13 FTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMI----KEASGPINFTVFLTMFGE 68
Query: 65 ---GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFG 121
GA + V F+ D D G+I KS L LTT G R + I M F
Sbjct: 69 KLKGADPEDVI--MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDV 126
Query: 122 RGTILFDDFIQCCITL 137
G + D+ C +
Sbjct: 127 AGNV---DYKNICYVI 139
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALS--NGTWTPFNPETVRLMIGMFDKHNRGSI 59
S + + +F +D+D+ GFI DEL L + + + + ++ DK G I
Sbjct: 38 KSADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKI 97
Query: 60 TFEDFGAL 67
E+F L
Sbjct: 98 GVEEFSTL 105
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 39 FNPETVRLMIGMFDK-----HNRGSITFEDFGALWKYVTDWQNCFRSFDRDNSGNIDKSE 93
+ E ++ IG F H + F+ G K D + F D+D G ID+ E
Sbjct: 6 LSAEDIKKAIGAFTAADSFDHKK---FFQMVGLKKKSADDVKKVFHILDKDKDGFIDEDE 62
Query: 94 LSAALTTF---GYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
L + L F LS + T++ D+ G G I ++F
Sbjct: 63 LGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 20/140 (14%)
Query: 9 NIFQGVDRDRSGFISADEL-QHALSNGTWTPFNPETVRLMIGMFDK--------HNRGS- 58
+F+ D++ +G + DE+ L F + FDK N+GS
Sbjct: 52 ELFKKFDKNETGKLXYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSE 111
Query: 59 --ITFEDFGALWKYVTDWQNCFRSFDR-DNSGN--IDKSELSAA---LTTFGYRLSDRMI 110
+ F +F + Y+ D+ FD D SGN +D+ E A L +G ++ D
Sbjct: 112 DFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVED--P 169
Query: 111 GTMLKKFDRFGRGTILFDDF 130
+ K+ D+ G G++ FD+F
Sbjct: 170 AALFKELDKNGTGSVTFDEF 189
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 10 IFQGVDRDRSGFISADELQHALSNGTWTPF-NPETVRLMIGMFDKHNRGSITFEDFGALW 68
+F+ +D + G +S +E++ +S + P N + ++L+ D G I +F
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVS--SKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFA 62
Query: 69 KYVTD---------WQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
V + + ++ D D G + K E++ FGY ++++ ++K D
Sbjct: 63 AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGY---EKVVDQIMKA-DA 118
Query: 120 FGRGTILFDDFI 131
G G I ++F+
Sbjct: 119 NGDGYITLEEFL 130
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRG 123
+++ F+ FD+DN + EL + G + + I ++K +D+ G
Sbjct: 15 EYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSG 65
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNIDKSELSAALTTFGY 103
+FDK N +T E+ G + + + + +D+DNSG D+ + +G
Sbjct: 22 LFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEYGQ 81
Query: 104 RL 105
+
Sbjct: 82 EV 83
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
S E L ++F+ D++ G+I +EL+ L T + + ++ DK+N G I +
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDY 60
Query: 62 EDFGALWKYV 71
++F K V
Sbjct: 61 DEFLEFMKGV 70
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
S E L ++F+ D++ G+I +EL+ L T + + ++ DK+N G I +
Sbjct: 4 KSEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDY 62
Query: 62 EDFGALWKYV 71
++F K V
Sbjct: 63 DEFLEFMKGV 72
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 18/136 (13%)
Query: 11 FQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDF------ 64
F +D++ G I D+L+ + E + MI K G I F F
Sbjct: 31 FTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMI----KEASGPINFTVFLTMFGE 86
Query: 65 ---GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFG 121
GA + V F+ D D G+I KS L LTT G R + I M F
Sbjct: 87 KLKGADPEDVI--MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDV 144
Query: 122 RGTILFDDFIQCCITL 137
G + D+ C +
Sbjct: 145 AGNV---DYKNICYVI 157
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 49/134 (36%), Gaps = 14/134 (10%)
Query: 11 FQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKY 70
F +D++R G I D+L+ + E + MI K G I F F ++
Sbjct: 18 FTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMI----KEASGPINFTVFLTMFGE 73
Query: 71 VTDWQN-------CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRG 123
+ F+ D D G+I KS L LTT R + I M F G
Sbjct: 74 KLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAAFPPDVAG 133
Query: 124 TILFDDFIQCCITL 137
+ D+ C +
Sbjct: 134 NV---DYKNICYVI 144
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 57 GSITFEDFGALWKYV------TDWQN-CFRSFDRDNSGNIDKSELSAALTTFGYRLSDRM 109
G + EDF ++K D+ N F FD+DN+G I E L+T +
Sbjct: 41 GQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEK 100
Query: 110 IGTMLKKFDRFGRGTILFDDFIQCCITLYALTSAFRSYDTDQ 151
+ + +D G I FD+ + ++Y + + + + D+
Sbjct: 101 LSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE 142
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKH-NRGSITFEDFGALW-KYVTDW- 74
+SG +S + L+ N T F E + F K G IT ++F ++ K+ +
Sbjct: 5 KSGALSKEILEELQLN---TKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEAD 61
Query: 75 -----QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDD 129
Q+ FRSFD ++ G +D E AL +++ + +D G GTI ++
Sbjct: 62 PKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 121
Query: 130 FIQCCITLYALTSA 143
++ ++ + S
Sbjct: 122 VLEIVTAIFKMISP 135
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 12/116 (10%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGA 66
L F +D+DR GFI ++L+ S+ P + E ++ K G + F F
Sbjct: 18 LKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAML-----KECPGQLNFTAFLT 72
Query: 67 LWKYV---TDWQ----NCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLK 115
L+ TD + N F FD D G I + L L G S I + K
Sbjct: 73 LFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWK 128
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Query: 69 KYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFD---RFGRGTI 125
+ + + + F D+D G I +L ++ G D + MLK+ F
Sbjct: 13 RQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLT 72
Query: 126 LFDDFIQCCITLYALTSAFRSYDTDQDGVITIHY 159
LF + + AL +AF +D D G I Y
Sbjct: 73 LFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDY 106
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 36 WTPFNPETVR----LMIGMFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDN 85
W P +R + +FDK G+IT +++ A + D + F+ D DN
Sbjct: 103 WARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDN 162
Query: 86 SGNIDKSELSAALTTFGYRLSDRMIG 111
SG +D E++ F Y L G
Sbjct: 163 SGELDVDEMTRQHLGFWYTLDPEADG 188
Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADEL--QHALSNGTWTPFNPET 43
PS E FQ D D SG + DE+ QH G W +PE
Sbjct: 146 PSEEDCEKTFQHCDLDNSGELDVDEMTRQHL---GFWYTLDPEA 186
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKH-NRGSITFEDFGALW-KYVTDW- 74
+SG +S + L+ N T F E + F K G IT ++F ++ K+ +
Sbjct: 4 KSGALSKEILEELQLN---TKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEAD 60
Query: 75 -----QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDD 129
Q+ FRSFD ++ G +D E AL +++ + +D G GTI ++
Sbjct: 61 PKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
Query: 130 FIQCCITLYALTSA 143
++ ++ + S
Sbjct: 121 VLEIVTAIFKMISP 134
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKH-NRGSITFEDFGALW-KYVTDW- 74
+SG +S + L+ N T F E + F K G IT ++F ++ K+ +
Sbjct: 4 KSGALSKEILEELQLN---TKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEAD 60
Query: 75 -----QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDD 129
Q+ FRSFD ++ G +D E AL +++ + +D G GTI ++
Sbjct: 61 PKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
Query: 130 FIQCCITLYALTSA 143
++ ++ + S
Sbjct: 121 VLEIVTAIFKMISP 134
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 20/107 (18%)
Query: 75 QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCC 134
++ FR+FD + G ID E AL+ ++ + +D G G I + ++
Sbjct: 66 EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125
Query: 135 ITLYALTSA------------------FRSYDTDQDGVITIHYEQFL 163
+Y + S+ FR DT++DG +++ E+F+
Sbjct: 126 QAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSL--EEFI 170
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 14 VDRDRSGFISADELQHALSNGTWTP----FNPETVRLMIGMFDKHNRGSITFEDFGALWK 69
+D+D+SGFI DEL+ L N ++P + + DK G I ++F A+ K
Sbjct: 50 IDQDKSGFIEEDELKLFLQN--FSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKH-NRGSITFEDFGALW-KYVTDW- 74
+SG +S + L+ N T F E + F K G IT ++F ++ K+ +
Sbjct: 4 KSGALSKEILEELQLN---TKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEAD 60
Query: 75 -----QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDD 129
Q+ FRSFD ++ G +D E AL +++ + +D G GTI ++
Sbjct: 61 PKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
Query: 130 FIQCCITLYALTSA 143
++ ++ + S
Sbjct: 121 VLEIVTAIFKMISP 134
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 102 GYRLSDRMIGTMLKKFDRFGRGT--ILFDDFIQCCITLYALTSAFRSYDTDQDGVITIHY 159
GY + M+ M +D GR T IL +D + + F D +QDGV+TI
Sbjct: 24 GYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERF-----FEKMDRNQDGVVTI-- 76
Query: 160 EQFLD 164
E+FL+
Sbjct: 77 EEFLE 81
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
+ E L ++F+ D++ G+I +EL+ L T + + ++ DK+N G I +
Sbjct: 12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDY 70
Query: 62 EDFGALWKYV 71
++F K V
Sbjct: 71 DEFLEFMKGV 80
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 36/129 (27%)
Query: 47 MIGMFDKHNRGSITFEDF---------GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAA 97
+ FD G+I FEDF G + + + W F +D + G I K E
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLK-W--AFNLYDINKDGCITKEE---- 186
Query: 98 LTTFGYRLSDRMIGTMLKKFDRFGRGT--ILFDDFIQCCITLYALTSAFRSYDTDQDGVI 155
M+ M +D GR T IL +D L + F+ D +QDGV+
Sbjct: 187 -----------MLAIMKSIYDMMGRHTYPILRED-----APLEHVERFFQKMDRNQDGVV 230
Query: 156 TIHYEQFLD 164
TI ++FL+
Sbjct: 231 TI--DEFLE 237
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 113 MLKKFDRFGRGTILFDDFIQCCITLY------ALTSAFRSYDTDQDGVITIHYEQFLDMV 166
+ FD G G I F+DF+ L L AF YD ++DG IT E+ L ++
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCIT--KEEMLAIM 191
Query: 167 FSL 169
S+
Sbjct: 192 KSI 194
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 73 DWQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFI 131
+ + FR +D++ +G I + L LS + M+ + D G GT+ F++F+
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQHALSN 33
S E + F+ D+D +G+ISA EL+H ++N
Sbjct: 36 SEEEIREAFRVFDKDGNGYISAAELRHVMTN 66
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 47 MIGMFDKHNRGSITFEDFGALWKYV-------TDWQNCFRSFDRDNSGNIDKSELSAALT 99
MI D G+I F +F + + + FR FD+D +G I +EL +T
Sbjct: 6 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 65
Query: 100 TFG 102
G
Sbjct: 66 NLG 68
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITF 61
+ E L ++F+ D++ G+I +EL+ L T + + ++ DK+N G I +
Sbjct: 7 KTEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDY 65
Query: 62 EDFGALWKYV 71
++F K V
Sbjct: 66 DEFLEFMKGV 75
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 14 VDRDRSGFISADELQ---HALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK 69
+D+D+SGFI DEL+ S G + ET + + D G+I +++ AL K
Sbjct: 51 IDQDKSGFIEEDELKLFLQVFSAGARALTDAET-KAFLKAGDSDGDGAIGVDEWAALVK 108
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 29.6 bits (65), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G+I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFIQCCI 135
G GT+ FD+F+ +
Sbjct: 67 DGSGTVDFDEFLVMMV 82
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G+I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFIQCCI 135
G GT+ FD+F+ +
Sbjct: 67 DGSGTVDFDEFLVMMV 82
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G+I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFIQCCI 135
G GT+ FD+F+ +
Sbjct: 67 DGSGTVDFDEFLVMMV 82
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
Query: 51 FDKHNRGSITFEDFGALWKYVTDWQN------CFRSFDRDNSGNIDKSELSAALTTF-GY 103
D + G++++E+ A +N F+S D D +G ID++E + + G
Sbjct: 9 IDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQ 68
Query: 104 RLSDRMIG--TMLKKFDRFGRGTILFDD----FIQCCITLYALTSAFRSYDTDQDGVITI 157
LSD IG + K D G G + ++ F + I A D + DG IT+
Sbjct: 69 DLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVA--EQVMKADANGDGYITL 126
Query: 158 HYEQFLDMVFSL 169
E+FL+ FSL
Sbjct: 127 --EEFLE--FSL 134
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
Query: 51 FDKHNRGSITFEDFGALWKYVTDWQN------CFRSFDRDNSGNIDKSELSAALTTF-GY 103
D + G++++E+ A +N F+S D D +G ID++E + + G
Sbjct: 9 IDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQ 68
Query: 104 RLSDRMIG--TMLKKFDRFGRGTILFDD----FIQCCITLYALTSAFRSYDTDQDGVITI 157
LSD IG + K D G G + ++ F + I A D + DG IT+
Sbjct: 69 DLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVA--EQVMKADANGDGYITL 126
Query: 158 HYEQFLDMVFSL 169
E+FL+ FSL
Sbjct: 127 --EEFLE--FSL 134
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKH-NRGSITFEDFGALW-KYVTDW- 74
+SG +S + L+ N T F E + F K G IT ++F ++ K+ +
Sbjct: 4 KSGALSKEILEELQLN---TKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEAD 60
Query: 75 -----QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDD 129
Q+ FRSFD ++ G +D + AL +++ + +D G GTI ++
Sbjct: 61 PKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
Query: 130 FIQCCITLYALTSA 143
++ ++ + S
Sbjct: 121 VLEIVTAIFKMISP 134
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 29.6 bits (65), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 18 RSGFISADELQHALSNGTWTPFNPETVRLMIGMFDKH-NRGSITFEDFGALW-KYVTDW- 74
+SG +S + L+ N T F E + F K G IT ++F ++ K+ +
Sbjct: 4 KSGALSKEILEELQLN---TKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEAD 60
Query: 75 -----QNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDD 129
Q+ FRSFD ++ G +D + AL +++ + +D G GTI ++
Sbjct: 61 PKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
Query: 130 FIQCCITLYALTSA 143
++ ++ + S
Sbjct: 121 VLEIVTAIFKMISP 134
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 7 LWNIFQGVDRDRSGFISADELQHALS--NGTWTPFNPETVRLMIGMFDKHNRGSITFEDF 64
+ +F+ +D+D+SGFI +EL+ L + N + ++ D + G I ++F
Sbjct: 43 VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEF 102
Query: 65 GAL 67
+
Sbjct: 103 AKM 105
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSN--GTWTPFNPETVRLMIGMFDKHNRGSI 59
S + + F +D+D+SGFI DEL+ L N + + D G I
Sbjct: 39 KSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKI 98
Query: 60 TFEDFGALWK 69
++F AL K
Sbjct: 99 GVDEFTALVK 108
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 65 GALWKYVTDWQNCFRS----FDRD-NSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ F +D G I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFI 131
G GT+ FD+F+
Sbjct: 67 DGSGTVDFDEFL 78
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 18/102 (17%)
Query: 51 FDKHNRGSITFEDFGA-----LWKYVTDWQN-CFRSFDRDNSGNIDKSELSAALT----- 99
FD + G+++FEDF L V + N F +D + G I K E+ +
Sbjct: 111 FDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDM 170
Query: 100 ----TFGYRLSD---RMIGTMLKKFDRFGRGTILFDDFIQCC 134
T+ D + + T +K D+ G + D+FI+ C
Sbjct: 171 MGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESC 212
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 113 MLKKFDRFGRGTILFDDFIQCCITLY------ALTSAFRSYDTDQDGVITIHYEQFLDMV 166
+ FD G + F+DFI+ L L AF YD ++DG IT E+ LD++
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYIT--KEEMLDIM 164
Query: 167 FSL 169
++
Sbjct: 165 KAI 167
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 7 LWNIFQGVDRDRSGFISADELQHAL---SNGTWTPFNPETVRLMIGMFDKHNRGSITFED 63
L IF+ +D D+SGFI DEL++ L +G ET + + D G I E+
Sbjct: 43 LKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASET-KTFLAAADHDGDGKIGAEE 101
Query: 64 FGALWK 69
F + +
Sbjct: 102 FQEMVQ 107
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 64 FGALWKYVTDWQ-NCFRS----FDRD-NSGNIDKSELSAALTTFGYRLSDRMIGTMLKKF 117
+ A + +TD Q N F++ F +D G I EL + G + + M+ +
Sbjct: 5 YKAAVEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEV 64
Query: 118 DRFGRGTILFDDFI 131
D G GT+ FD+F+
Sbjct: 65 DEDGSGTVDFDEFL 78
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 14 VDRDRSGFISADELQ---HALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK 69
+D+D+SGFI DEL+ G + ET + + D G+I E++ AL K
Sbjct: 51 IDQDKSGFIEEDELKLFLQVFKAGARALTDAET-KAFLKAGDSDGDGAIGVEEWVALVK 108
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 14 VDRDRSGFISADELQ---HALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWK 69
+D+D+SGFI DEL+ G + ET + + D G+I E++ AL K
Sbjct: 50 IDQDKSGFIEEDELKLFLQVFKAGARALTDAET-KAFLKAGDSDGDGAIGVEEWVALVK 107
>pdb|3RMR|A Chain A, Crystal Structure Of Hyaloperonospora Arabidopsidis Atr1
Effector Domain
pdb|3RMR|B Chain B, Crystal Structure Of Hyaloperonospora Arabidopsidis Atr1
Effector Domain
pdb|3RMR|C Chain C, Crystal Structure Of Hyaloperonospora Arabidopsidis Atr1
Effector Domain
Length = 260
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 38 PFNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDWQNCFRSFDRDN-SGNIDKSELSA 96
PF P V +I D+H R ++ D K V W+ +RD+ G I K A
Sbjct: 13 PFGPSAVEALIETIDRHGR--VSLNDEAKXKKVVRTWKKL---IERDDLIGEIGKHYFEA 67
Query: 97 ALT---TFGYRLSDRMIGT 112
T+ L+ R++ T
Sbjct: 68 PGPLHDTYDEALATRLVTT 86
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFI 131
G GT+ FD+F+
Sbjct: 67 DGSGTVDFDEFL 78
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 43 TVRLMIGMFDKHNRGSITFEDFG----ALWKYVTDWQNCFRSFDRDNSGNIDKSELSAAL 98
V+ ++GM DK+ G I ++F AL + F D + +G + EL A+
Sbjct: 103 VVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAV 162
Query: 99 TTFGY-RLSDRMIG 111
F + RL ++G
Sbjct: 163 RDFHFGRLDVELLG 176
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 65 GALWKYVTDWQNCFRS-FD----RDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDR 119
A+ + + +N F++ FD G I EL + G + + M+ + D
Sbjct: 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDE 66
Query: 120 FGRGTILFDDFI 131
G GT+ FD+F+
Sbjct: 67 DGSGTVDFDEFL 78
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 50 MFDKHNRGSITFEDF------GALWKYVTDWQNCFRSFDRDNSGNIDKSELSAALTTFGY 103
+FDK GSI+ +++ + D + F+ D DNSG +D E++ F Y
Sbjct: 124 IFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTRQHLGFWY 183
Query: 104 RLSDRMIG 111
L G
Sbjct: 184 TLDPNADG 191
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNIDKSELSAALTTFGY 103
+FDK G+IT ++ G + + + + Q+ D D +G ID E LT
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF---LTMMAR 74
Query: 104 RLSD 107
++ D
Sbjct: 75 KMKD 78
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNIDKSELSAALTTFGY 103
+FDK G+IT ++ G + + + + Q+ D D +G ID E LT
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF---LTMMAR 74
Query: 104 RLSD 107
++ D
Sbjct: 75 KMKD 78
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 117 FDRFGRGTILFDDFIQCCITL------YALTSAFRSYDTDQDGVITIHYEQFLDMV 166
FD G I F +FIQ L AF+ YD D DG IT + + LD+V
Sbjct: 72 FDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRN--EMLDIV 125
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNIDKSELSAALTTFGY 103
+FDK G+IT ++ G + + + + Q+ D D G ID E LT
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF---LTMMAR 74
Query: 104 RLSD 107
++ D
Sbjct: 75 KMKD 78
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNIDKSELSAALTTFGY 103
+FDK G+IT ++ G + + + + Q+ D D +G ID E LT
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF---LTMMAR 74
Query: 104 RLSD 107
++ D
Sbjct: 75 KMKD 78
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 13/78 (16%)
Query: 3 SREFLWNIFQGVDRDRSGFISADELQH-----ALSNGTWTPFNPETVRLMIGMFDKHNRG 57
S E L F D D+SG I+ +EL + ++S TW ++G D++
Sbjct: 433 SEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWND--------VLGEADQNKDN 484
Query: 58 SITFEDFGALWKYVTDWQ 75
I F++F ++ + D +
Sbjct: 485 MIDFDEFVSMMHKICDHK 502
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 28/108 (25%)
Query: 78 FRSFDRDNSGNIDKSELSAA----LTTFG-----------YRLSDRMIGTMLKKFDRFGR 122
F +FD+D +G+ID+S+ S A L FG Y ++ + + DR G
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 123 GTILFDDFIQCCITLYA-------------LTSAFRSYDTDQDGVITI 157
I ++F+ + L +A DTD DG +T+
Sbjct: 70 QRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTV 117
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 28/108 (25%)
Query: 78 FRSFDRDNSGNIDKSELSAA----LTTFG-----------YRLSDRMIGTMLKKFDRFGR 122
F +FD+D +G+ID+S+ S A L FG Y ++ + + DR G
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 123 GTILFDDFIQCCITLYA-------------LTSAFRSYDTDQDGVITI 157
I ++F+ + L +A DTD DG +T+
Sbjct: 70 QRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTV 117
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 78 FRSFDRDNSGNIDKSELSAALTTFGYRLSDRMIGTMLKKFDRFGRGTILFDDFIQCCITL 137
FR+FD + ID E AAL + + K +D+ G I + + ++
Sbjct: 65 FRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESI 124
Query: 138 YALTSAFR-SYDTDQDGVITIHYEQFLDMVFSL 169
Y L A + +Q G + + E+ +D +F L
Sbjct: 125 YKLKKACSVEVEAEQQGKL-LTPEEVVDRIFLL 156
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 57 GSITFEDFGALW-KYVTD------WQNCFRSFDRDNSGNIDKSELSAALTTFGYRLSDRM 109
G IT + F +++ K+ D Q+ FRSFD + G +D E AL +++
Sbjct: 49 GRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQK 108
Query: 110 IGTMLKKFDRFGRGTILFDDFIQCCITLY 138
+ +D G GTI ++ ++ ++
Sbjct: 109 LEWAFSLYDVDGNGTISKNEVLEIVXAIF 137
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNID 90
+FDK G+IT ++ G + + + + Q+ D D +G ID
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 73 DWQNCFRSFDRD-NSGNIDKSELSAALTTF-GYRLSDRMIGTMLKKFDRFGRGTILFDDF 130
+ Q ++ F +D SG+++KSE F + + FD G I F +F
Sbjct: 26 ELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEF 85
Query: 131 IQCCITLYA-------LTSAFRSYDTDQDGVITIHYEQFLDMV 166
I C +++ + L AF+ YD D +G+I+ Y++ L +V
Sbjct: 86 I-CALSVTSRGELNDKLIWAFQLYDLDNNGLIS--YDEMLRIV 125
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNID 90
+FDK G+IT ++ G + + + + Q+ D D +G ID
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNID 90
+FDK G+IT ++ G + + + + Q+ D D +G ID
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNID 90
+FDK G+IT ++ G + + + + Q+ D D +G ID
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 50 MFDKHNRGSITFEDFGALWKYV------TDWQNCFRSFDRDNSGNID 90
+FDK G+IT ++ G + + + + Q+ D D +G ID
Sbjct: 19 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 7 LWNIFQGVDRDRSGFISADELQ---HALSNGTWTPFNPETVRLMIGMFDKHNRGSITFED 63
+ ++F+ +D D+SG++ +EL+ +G ET LM D G I E+
Sbjct: 44 VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAA-DNDGDGKIGAEE 102
Query: 64 FGAL 67
F +
Sbjct: 103 FQEM 106
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 2 PSREFLWNIFQGVDRDRSGFISADELQHALSN 33
S + + F +D+D+SGFI DEL+ L N
Sbjct: 38 KSADDVKKAFAIIDQDKSGFIEEDELKLFLQN 69
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 4 REFLWNIFQGVDRDRSGFISADELQHALSNG 34
++ + NI + D DR G I+ E QH +S
Sbjct: 142 KQLIDNILEESDIDRDGTINLSEFQHVISRS 172
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 4 REFLWNIFQGVDRDRSGFISADELQHALSNG 34
++ + NI + D DR G I+ E QH +S
Sbjct: 173 KQLIDNILEESDIDRDGTINLSEFQHVISRS 203
>pdb|1YGP|A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With
Phosphate Bound In The Active Site.
pdb|1YGP|B Chain B, Phosphorylated Form Of Yeast Glycogen Phosphorylase With
Phosphate Bound In The Active Site
Length = 879
Score = 26.2 bits (56), Expect = 8.8, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 23 SADELQHALSNGTWTPFNPETVRLMIGMFDKHNRGSITFEDFGALWKYVTDWQNCFRSFD 82
S D + + +G ++P NP + ++ H + +DF + Y+ + + F
Sbjct: 783 SLDSVLSYIESGQFSPENPNEFKPLVDSIKYHGDYYLVSDDFES---YLATHELVDQEFH 839
Query: 83 RDNSGNIDKSELSAALTTFGYRLSDRMI 110
S + KS LS L G+ SDR I
Sbjct: 840 NQRSEWLKKSVLS--LANVGFFSSDRCI 865
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.327 0.141 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,360,196
Number of Sequences: 62578
Number of extensions: 217851
Number of successful extensions: 1539
Number of sequences better than 100.0: 289
Number of HSP's better than 100.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 713
Number of HSP's gapped (non-prelim): 731
length of query: 171
length of database: 14,973,337
effective HSP length: 92
effective length of query: 79
effective length of database: 9,216,161
effective search space: 728076719
effective search space used: 728076719
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 48 (23.1 bits)