BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17056
(251 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 93/129 (72%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTSERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V ++ EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 221 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 280
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 281 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 340
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 341 MSIFKIIAG 349
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 144 bits (362), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 93/129 (72%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V ++ EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 144 bits (362), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 221 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 280
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 281 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 340
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 341 MSIFKIIAG 349
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 233 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 292
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 293 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 352
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 353 MSIFKIIAG 361
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 221 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 280
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 281 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 340
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 341 MSIFKIIAG 349
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 233 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 292
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 293 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 352
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 353 MSIFKIIAG 361
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 93/129 (72%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V ++ EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEEEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 221 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 280
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 281 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 340
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 341 MSIFKIIAG 349
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 233 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 292
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 293 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 352
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 353 MSIFKIIAG 361
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 221 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 280
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 281 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 340
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 341 MSIFKIIAG 349
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 233 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 292
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 293 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 352
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 353 MSIFKIIAG 361
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 93/129 (72%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V ++ EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 221 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 280
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 281 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 340
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 341 MSIFKIIAG 349
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNN+SRFGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNASRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V + EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 92/129 (71%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSS FGKFI++ + G + GA +Q YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LLAGA+ +++ +LHL ES++YLN+SG + V ++ EF +Q+M++VGF+QE+Q
Sbjct: 282 YQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQ 341
Query: 132 RRLFAVLSA 140
+F +++
Sbjct: 342 MSIFKIIAG 350
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 20/223 (8%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 188 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 247
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR N + + + ++S E +
Sbjct: 248 YRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL------- 300
Query: 132 RRLFAVLSASGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQRRLFAVLSAVLLLGNVEFV 191
+G +D+ +F R+ +M+ +G E++ LF V++ VL LGN++F
Sbjct: 301 --------KAGSLKDPGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF- 351
Query: 192 PRKSAYHHDESVTVRN--TEVVVLISELLRVKKETLLAALTAK 232
+ A ++N T+ + +ELL + ++ L +LT +
Sbjct: 352 --EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 392
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 20/223 (8%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 189 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 248
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR N + + + ++S E +
Sbjct: 249 YRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL------- 301
Query: 132 RRLFAVLSASGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQRRLFAVLSAVLLLGNVEFV 191
+G +D+ +F R+ +M+ +G E++ LF V++ VL LGN++F
Sbjct: 302 --------KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF- 352
Query: 192 PRKSAYHHDESVTVRN--TEVVVLISELLRVKKETLLAALTAK 232
+ A ++N T+ + +ELL + ++ L +LT +
Sbjct: 353 --EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 393
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 20/223 (8%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 189 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 248
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR N + + + ++S E +
Sbjct: 249 YRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL------- 301
Query: 132 RRLFAVLSASGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQRRLFAVLSAVLLLGNVEFV 191
+G +D+ +F R+ +M+ +G E++ LF V++ VL LGN++F
Sbjct: 302 --------KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF- 352
Query: 192 PRKSAYHHDESVTVRN--TEVVVLISELLRVKKETLLAALTAK 232
+ A ++N T+ + +ELL + ++ L +LT +
Sbjct: 353 --EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 393
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 20/223 (8%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 198 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 257
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR N + + + ++S E +
Sbjct: 258 YRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL------- 310
Query: 132 RRLFAVLSASGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQRRLFAVLSAVLLLGNVEFV 191
+G +D+ +F R+ +M+ +G E++ LF V++ VL LGN++F
Sbjct: 311 --------KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF- 361
Query: 192 PRKSAYHHDESVTVRN--TEVVVLISELLRVKKETLLAALTAK 232
+ A ++N T+ + +ELL + ++ L +LT +
Sbjct: 362 --EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 402
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 20/223 (8%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 186 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 245
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR N + + + ++S E +
Sbjct: 246 YRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL------- 298
Query: 132 RRLFAVLSASGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQRRLFAVLSAVLLLGNVEFV 191
+G +D+ +F R+ +M+ +G E++ LF V++ VL LGN++F
Sbjct: 299 --------KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF- 349
Query: 192 PRKSAYHHDESVTVRN--TEVVVLISELLRVKKETLLAALTAK 232
+ A ++N T+ + +ELL + ++ L +LT +
Sbjct: 350 --EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 390
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 20/223 (8%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 198 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 257
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR N + + + ++S E +
Sbjct: 258 YRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL------- 310
Query: 132 RRLFAVLSASGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQRRLFAVLSAVLLLGNVEFV 191
+G +D+ +F R+ +M+ +G E++ LF V++ VL LGN++F
Sbjct: 311 --------KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF- 361
Query: 192 PRKSAYHHDESVTVRN--TEVVVLISELLRVKKETLLAALTAK 232
+ A ++N T+ + +ELL + ++ L +LT +
Sbjct: 362 --EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 402
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 20/223 (8%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 185 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 244
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR N + + + ++S E +
Sbjct: 245 YRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL------- 297
Query: 132 RRLFAVLSASGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQRRLFAVLSAVLLLGNVEFV 191
+G +D+ +F R+ +M+ +G E++ LF V++ VL LGN++F
Sbjct: 298 --------KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF- 348
Query: 192 PRKSAYHHDESVTVRN--TEVVVLISELLRVKKETLLAALTAK 232
+ A ++N T+ + +ELL + ++ L +LT +
Sbjct: 349 --EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 389
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 20/223 (8%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 188 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 247
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR N + + + ++S E +
Sbjct: 248 YRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL------- 300
Query: 132 RRLFAVLSASGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQRRLFAVLSAVLLLGNVEFV 191
+G +D+ +F R+ +M+ +G E++ LF V++ VL LGN++F
Sbjct: 301 --------KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF- 351
Query: 192 PRKSAYHHDESVTVRN--TEVVVLISELLRVKKETLLAALTAK 232
+ A ++N T+ + +ELL + ++ L +LT +
Sbjct: 352 --EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 392
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 20/223 (8%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 188 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 247
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR N + + + ++S E +
Sbjct: 248 YRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL------- 300
Query: 132 RRLFAVLSASGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQRRLFAVLSAVLLLGNVEFV 191
+G +D+ +F R+ +M+ +G E++ LF V++ VL LGN++F
Sbjct: 301 --------KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDF- 351
Query: 192 PRKSAYHHDESVTVRN--TEVVVLISELLRVKKETLLAALTAK 232
+ A ++N T+ + +ELL + ++ L +LT +
Sbjct: 352 --EEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 392
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 90/139 (64%), Gaps = 2/139 (1%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 189 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 248
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR G +D+ +F R+ +M+ +G E++
Sbjct: 249 YRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEK 308
Query: 132 RRLFAVLSASGPYTLDNVD 150
LF V+ +G L N+D
Sbjct: 309 LDLFRVV--AGVLHLGNID 325
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 90/139 (64%), Gaps = 2/139 (1%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 188 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 247
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR G +D+ +F R+ +M+ +G E++
Sbjct: 248 YRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEK 307
Query: 132 RRLFAVLSASGPYTLDNVD 150
LF V+ +G L N+D
Sbjct: 308 LDLFRVV--AGVLHLGNID 324
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 90/139 (64%), Gaps = 2/139 (1%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKF+++++ E V G V YLLEKSRIC QG+ ERNYH+F
Sbjct: 188 LEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYHIF 247
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L AGAS+ R LHL +++ YLNR G +D+ +F R+ +M+ +G E++
Sbjct: 248 YRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEK 307
Query: 132 RRLFAVLSASGPYTLDNVD 150
LF V+ +G L N+D
Sbjct: 308 LDLFRVV--AGVLHLGNID 324
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT N+NSSRFGKFI++N+ G + GA ++ YLLEKSR Q + ER +H+F
Sbjct: 230 LEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIF 289
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYL-NRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
YYL+AGAS+Q R+ L L+ +Y +L N P DE F ++M ++GFT+E+
Sbjct: 290 YYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEM--FQETLEAMTIMGFTEEE 347
Query: 131 QRRLFAVLSA 140
Q + V+S+
Sbjct: 348 QTSILRVVSS 357
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 94/152 (61%), Gaps = 5/152 (3%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT N+NSSRFGKFI++N+ G + GA ++ YLLEKSR Q + ER +H+F
Sbjct: 230 LEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIF 289
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYL-NRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
YYL+AGAS+Q R+ L L+ +Y +L N P DE F ++M ++GFT+E+
Sbjct: 290 YYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEM--FQETLEAMTIMGFTEEE 347
Query: 131 QRRLFAVLSASGPYTLDNVDEKYEFSRLQQSM 162
Q + V+S+ L N+ K E + Q SM
Sbjct: 348 QTSILRVVSSV--LQLGNIVFKKERNTDQASM 377
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 94/152 (61%), Gaps = 5/152 (3%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT N+NSSRFGKFI++N+ G + GA ++ YLLEKSR Q + ER +H+F
Sbjct: 230 LEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIF 289
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYL-NRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
YYL+AGAS+Q R+ L L+ +Y +L N P DE F ++M ++GFT+E+
Sbjct: 290 YYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEM--FQETLEAMTIMGFTEEE 347
Query: 131 QRRLFAVLSASGPYTLDNVDEKYEFSRLQQSM 162
Q + V+S+ L N+ K E + Q SM
Sbjct: 348 QTSILRVVSSV--LQLGNIVFKKERNTDQASM 377
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 114 bits (284), Expect = 7e-26, Method: Composition-based stats.
Identities = 66/152 (43%), Positives = 94/152 (61%), Gaps = 5/152 (3%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT N+NSSRFGKFI++N+ G + GA ++ YLLEKSR Q + ER +H+F
Sbjct: 230 LEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIF 289
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYL-NRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
YYL+AGAS+Q R+ L L+ +Y +L N P DE F ++M ++GFT+E+
Sbjct: 290 YYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEM--FQETLEAMTIMGFTEEE 347
Query: 131 QRRLFAVLSASGPYTLDNVDEKYEFSRLQQSM 162
Q + V+S+ L N+ K E + Q SM
Sbjct: 348 QTSILRVVSSV--LQLGNIVFKKERNTDQASM 377
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 114 bits (284), Expect = 7e-26, Method: Composition-based stats.
Identities = 66/152 (43%), Positives = 94/152 (61%), Gaps = 5/152 (3%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT N+NSSRFGKFI++N+ G + GA ++ YLLEKSR Q + ER +H+F
Sbjct: 230 LEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIF 289
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYL-NRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
YYL+AGAS+Q R+ L L+ +Y +L N P DE F ++M ++GFT+E+
Sbjct: 290 YYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEM--FQETLEAMTIMGFTEEE 347
Query: 131 QRRLFAVLSASGPYTLDNVDEKYEFSRLQQSM 162
Q + V+S+ L N+ K E + Q SM
Sbjct: 348 QTSILRVVSSV--LQLGNIVFKKERNTDQASM 377
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 114 bits (284), Expect = 7e-26, Method: Composition-based stats.
Identities = 66/152 (43%), Positives = 94/152 (61%), Gaps = 5/152 (3%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT N+NSSRFGKFI++N+ G + GA ++ YLLEKSR Q + ER +H+F
Sbjct: 230 LEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIF 289
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYL-NRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
YYL+AGAS+Q R+ L L+ +Y +L N P DE F ++M ++GFT+E+
Sbjct: 290 YYLIAGASEQMRNDLLLEGFNNYTFLSNGHVPIPAQQDDEM--FQETLEAMTIMGFTEEE 347
Query: 131 QRRLFAVLSASGPYTLDNVDEKYEFSRLQQSM 162
Q + V+S+ L N+ K E + Q SM
Sbjct: 348 QTSILRVVSSV--LQLGNIVFKKERNTDQASM 377
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 79/129 (61%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT NNNSSRFGKFI++++ G + GA ++ YLLEKSR+ Q ERNYH+F
Sbjct: 227 LEAFGNAKTVRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIF 286
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y + + A + + + + G T+DN+D+ EF ++ +++GFT+E++
Sbjct: 287 YQICSNAIPELNEVMLITPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEK 346
Query: 132 RRLFAVLSA 140
+F ++
Sbjct: 347 TSMFKCTAS 355
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 87/131 (66%), Gaps = 4/131 (3%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ A+GNAKT NNNSSRFGKFI++++ G + GA ++ YLLEKSR+ Q ERNYH+F
Sbjct: 226 LEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIF 285
Query: 72 YYLLAGASDQDRHSLHLKKIES--YHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQE 129
Y + + A + + + L +S Y ++N+ G T+DN+D+ EF ++ +++GFT+E
Sbjct: 286 YQICSNAIPE-LNDVMLVTPDSGLYSFINQ-GCLTVDNIDDVEEFKLCDEAFDILGFTKE 343
Query: 130 KQRRLFAVLSA 140
+++ +F ++
Sbjct: 344 EKQSMFKCTAS 354
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 87/131 (66%), Gaps = 4/131 (3%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ A+GNAKT NNNSSRFGKFI++++ G + GA ++ YLLEKSR+ Q ERNYH+F
Sbjct: 226 LEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIF 285
Query: 72 YYLLAGASDQDRHSLHLKKIES--YHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQE 129
Y + + A + + + L +S Y ++N+ G T+DN+D+ EF ++ +++GFT+E
Sbjct: 286 YQICSNAIPE-LNDVMLVTPDSGLYSFINQ-GCLTVDNIDDVEEFKLCDEAFDILGFTKE 343
Query: 130 KQRRLFAVLSA 140
+++ +F ++
Sbjct: 344 EKQSMFKCTAS 354
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 87/131 (66%), Gaps = 4/131 (3%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ A+GNAKT NNNSSRFGKFI++++ G + GA ++ YLLEKSR+ Q ERNYH+F
Sbjct: 226 LEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIF 285
Query: 72 YYLLAGASDQDRHSLHLKKIES--YHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQE 129
Y + + A + + + L +S Y ++N+ G T+DN+D+ EF ++ +++GFT+E
Sbjct: 286 YQICSNAIPE-LNDVMLVTPDSGLYSFINQ-GCLTVDNIDDVEEFKLCDEAFDILGFTKE 343
Query: 130 KQRRLFAVLSA 140
+++ +F ++
Sbjct: 344 EKQSMFKCTAS 354
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 87/131 (66%), Gaps = 4/131 (3%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ A+GNAKT NNNSSRFGKFI++++ G + GA ++ YLLEKSR+ Q ERNYH+F
Sbjct: 221 LEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIF 280
Query: 72 YYLLAGASDQDRHSLHLKKIES--YHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQE 129
Y + + A + + + L +S Y ++N+ G T+DN+D+ EF ++ +++GFT+E
Sbjct: 281 YQICSNAIPE-LNDVMLVTPDSGLYSFINQ-GCLTVDNIDDVEEFKLCDEAFDILGFTKE 338
Query: 130 KQRRLFAVLSA 140
+++ +F ++
Sbjct: 339 EKQSMFKCTAS 349
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 87/131 (66%), Gaps = 4/131 (3%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ A+GNAKT NNNSSRFGKFI++++ G + GA ++ YLLEKSR+ Q ERNYH+F
Sbjct: 222 LEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIF 281
Query: 72 YYLLAGASDQDRHSLHLKKIES--YHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQE 129
Y + + A + + + L +S Y ++N+ G T+DN+D+ EF ++ +++GFT+E
Sbjct: 282 YQICSNAIPE-LNDVMLVTPDSGLYSFINQ-GCLTVDNIDDVEEFKLCDEAFDILGFTKE 339
Query: 130 KQRRLFAVLSA 140
+++ +F ++
Sbjct: 340 EKQSMFKCTAS 350
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 79/129 (61%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ A+GNAKT NNNSSRFGKFI++++ G + GA ++ YLLEKSR+ Q ERNYH+F
Sbjct: 228 LEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIF 287
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y + + A + + + + G T+DN+D+ EF ++ +++GFT+E++
Sbjct: 288 YQICSNAIPELNEVMLITPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEK 347
Query: 132 RRLFAVLSA 140
+F ++
Sbjct: 348 TSMFKCTAS 356
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT N+NSSRFGK++++ + G G + YLLEKSR+ + +GER++H+F
Sbjct: 143 LEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIF 202
Query: 72 YYLLAGASDQDRHSLHL-KKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
Y +L G S L L +Y YL +SG + + +D+ EF + ++ME +G +
Sbjct: 203 YQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFKIIVKAMETLGLKESD 262
Query: 131 QRRLFAVLSA 140
Q ++ +L+A
Sbjct: 263 QNSIWRILAA 272
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT N+NSSRFGK++++ + G G + YLLEKSR+ + +GER++H+F
Sbjct: 143 LEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIF 202
Query: 72 YYLLAGASDQDRHSLHL-KKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
Y +L G S L L +Y YL +SG + + +D+ EF + ++ME +G +
Sbjct: 203 YQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFKIIVKAMETLGLKESD 262
Query: 131 QRRLFAVLSA 140
Q ++ +L+A
Sbjct: 263 QNSIWRILAA 272
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 100 bits (250), Expect = 5e-22, Method: Composition-based stats.
Identities = 50/125 (40%), Positives = 80/125 (64%), Gaps = 2/125 (1%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ A+GNAKT NNNSSRFGKFI++++ G + GA ++ YLLEKSR+ Q ERNYH+F
Sbjct: 231 LEAYGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGADIETYLLEKSRVTYQQSAERNYHIF 290
Query: 72 YYLLAGASDQD-RHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
Y LL+ A ++ L + Y ++N+ G T+D +D++ E + +++GFT E+
Sbjct: 291 YQLLSPAFPENIEKILAVPDPGLYGFINQ-GTLTVDGIDDEEEMGLTDTAFDVLGFTDEE 349
Query: 131 QRRLF 135
+ ++
Sbjct: 350 KLSMY 354
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ + GNAKT N+NSSRFGK+I++ + + + GA ++ YLLEKSR+ Q ERNYH+F
Sbjct: 203 MESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIF 262
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L A A+ + +L L +HY + G +D +D+ E +Q+ ++G + Q
Sbjct: 263 YQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQ 322
Query: 132 RRLFAVLSASGPYTLDNVD 150
+F +L +G L NV+
Sbjct: 323 MGIFRIL--AGILHLGNVE 339
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 45/231 (19%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ + GNAKT N+NSSRFGK+I++ + + + GA ++ YLLEKSR+ Q ERNYH+F
Sbjct: 203 MESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIF 262
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L A A+ + +L L +HY + G +D +D+ E +Q+ ++G + Q
Sbjct: 263 YQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQ 322
Query: 132 RRLFAVLSASGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQRRLFAVLSAVLLLGNVEFV 191
+F +L+ +L LGNVEF
Sbjct: 323 MGIF-----------------------------------------RILAGILHLGNVEFA 341
Query: 192 PRKSAYHHDESVTVRNTEVVVLISELLRVKKETLLAALTAKHARASDETLV 242
R S D + + + +L+ V E + L + + ET +
Sbjct: 342 SRDS----DSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYI 388
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 45/231 (19%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ + GNAKT N+NSSRFGK+I++ + + + GA ++ YLLEKSR+ Q ERNYH+F
Sbjct: 203 MESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIF 262
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y L A A+ + +L L +HY + G +D +D+ E +Q+ ++G + Q
Sbjct: 263 YQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQ 322
Query: 132 RRLFAVLSASGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQRRLFAVLSAVLLLGNVEFV 191
+F +L+ +L LGNVEF
Sbjct: 323 MGIF-----------------------------------------RILAGILHLGNVEFA 341
Query: 192 PRKSAYHHDESVTVRNTEVVVLISELLRVKKETLLAALTAKHARASDETLV 242
R S D + + + +L+ V E + L + + ET +
Sbjct: 342 SRDS----DSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYI 388
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT N+NSSRFGKFI++N+ G + GA ++ YLLEKSR Q + E ++H+F
Sbjct: 200 LEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANIETYLLEKSRAIRQAKDECSFHIF 259
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y LL GA +Q + L L+ Y +L +GP + E+ F +S+ ++GF+ E+
Sbjct: 260 YQLLGGAGEQLKADLLLEPCSHYRFLT-NGPSSSPG-QERELFQETLESLRVLGFSHEEI 317
Query: 132 RRLFAVLSA 140
+ ++SA
Sbjct: 318 ISMLRMVSA 326
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 75/129 (58%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT N+NSSRFGKFI++++ G + A ++ YLLEKSR+ Q + ER+YH+F
Sbjct: 227 LEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERDYHIF 286
Query: 72 YYLLAGASDQDRHSLHLKKIESYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEKQ 131
Y +L+ + L + + G T+ ++D+ E + +++GFT E++
Sbjct: 287 YQILSNKKPELLDMLLITNNPYDYAFISQGETTVASIDDAEELMATDNAFDVLGFTSEEK 346
Query: 132 RRLFAVLSA 140
++ + A
Sbjct: 347 NSMYKLTGA 355
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNAKT N+NSSRFGKFI++++ G + A ++ YLLEKSR+ Q ER+YH+F
Sbjct: 226 LEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIF 285
Query: 72 YYLLAGASDQDRHSLHLKKIE-SYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
Y +++ + L + YHY+++ G T+ ++D++ E +++++GF+ ++
Sbjct: 286 YQIMSNKKPELIDMLLITTNPYDYHYVSQ-GEITVPSIDDQEELMATDSAIDILGFSADE 344
Query: 131 QRRLFAVLSA 140
+ ++ + A
Sbjct: 345 KTAIYKLTGA 354
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNA T N+NSSRFG FI++++ G + A ++ YLLE SR+ Q ER+YH+F
Sbjct: 229 LEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAERSYHIF 288
Query: 72 YYLLAGASDQDRHSLHLKKIE-SYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
Y +++ + L + YHY++ G T+ ++D++ E +++++GF+ ++
Sbjct: 289 YQIMSNXXPELIDMLLITTNPYDYHYVSE-GEITVPSIDDQEELMATDSAIDILGFSADE 347
Query: 131 QRRLFAVLSA 140
++ + A
Sbjct: 348 XTAIYXLTGA 357
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Query: 12 IHAFGNAKTAHNNNSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGRGERNYHVF 71
+ AFGNA T N+NSSRFG FI++++ G + A ++ YLLE SR+ Q ER+YH+F
Sbjct: 226 LEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAERSYHIF 285
Query: 72 YYLLAGASDQDRHSLHLKKIE-SYHYLNRSGPYTLDNVDEKYEFSRLQQSMEMVGFTQEK 130
Y +++ + L + YHY++ G T+ ++D++ E +++++GF+ ++
Sbjct: 286 YQIMSNXXPELIDMLLITTNPYDYHYVSE-GEITVPSIDDQEELMATDSAIDILGFSADE 344
Query: 131 QRRLFAVLSA 140
++ + A
Sbjct: 345 XTAIYXLTGA 354
>pdb|3QSZ|A Chain A, Crystal Structure Of The Star-Related Lipid Transfer
Protein (Fragment 25-204) From Xanthomonas Axonopodis At
The Resolution 2.4a, Northeast Structural Genomics
Consortium Target Xar342
pdb|3QSZ|B Chain B, Crystal Structure Of The Star-Related Lipid Transfer
Protein (Fragment 25-204) From Xanthomonas Axonopodis At
The Resolution 2.4a, Northeast Structural Genomics
Consortium Target Xar342
Length = 189
Score = 30.4 bits (67), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 19/84 (22%)
Query: 86 LHLKKIESYHYLNRSGPYTLDNVDEKYEFS-----------RLQQSMEMVGFTQEKQRRL 134
L E YHYL+ S P+ + N D Y F+ R++ + + + K R
Sbjct: 65 LKATDTEQYHYLDNSAPWPVSNRDGVYHFTYEKAGDGAITVRVEAVPDYLPLRKGKVR-- 122
Query: 135 FAVLSASGPYTL----DNVDEKYE 154
+ A G +TL D VD Y+
Sbjct: 123 --IPRAKGQWTLVPDADGVDVTYQ 144
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,656,254
Number of Sequences: 62578
Number of extensions: 243774
Number of successful extensions: 771
Number of sequences better than 100.0: 63
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 629
Number of HSP's gapped (non-prelim): 118
length of query: 251
length of database: 14,973,337
effective HSP length: 96
effective length of query: 155
effective length of database: 8,965,849
effective search space: 1389706595
effective search space used: 1389706595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)