Query psy17057
Match_columns 80
No_of_seqs 103 out of 703
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 20:46:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17057.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17057hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lkx_A Myosin IE heavy chain; 99.9 5.9E-27 2E-31 187.8 7.3 76 1-80 99-176 (697)
2 1kk8_A Myosin heavy chain, str 99.9 4E-27 1.4E-31 191.6 6.3 80 1-80 174-259 (837)
3 1w7j_A Myosin VA; motor protei 99.9 6.6E-27 2.3E-31 189.5 6.4 74 1-80 161-236 (795)
4 4db1_A Myosin-7; S1DC, cardiac 99.9 6.8E-27 2.3E-31 189.3 6.4 80 1-80 176-260 (783)
5 1w9i_A Myosin II heavy chain; 99.9 9.3E-27 3.2E-31 188.4 6.0 77 1-80 177-255 (770)
6 2v26_A Myosin VI; calmodulin-b 99.9 5.9E-27 2E-31 189.5 4.3 72 1-80 145-218 (784)
7 1g8x_A Myosin II heavy chain f 99.9 2.3E-26 8E-31 189.7 6.3 77 1-80 177-255 (1010)
8 4anj_A Unconventional myosin-V 99.9 1.3E-26 4.4E-31 192.0 4.0 72 1-80 149-222 (1052)
9 1i84_S Smooth muscle myosin he 99.9 2E-26 6.7E-31 190.9 4.9 80 1-80 174-263 (1184)
10 2dfs_A Myosin-5A; myosin-V, in 99.9 1.9E-26 6.6E-31 191.0 4.7 74 1-80 161-236 (1080)
11 2ycu_A Non muscle myosin 2C, a 99.9 1.4E-26 4.8E-31 190.6 2.5 80 1-80 151-233 (995)
12 1kgd_A CASK, peripheral plasma 92.0 0.056 1.9E-06 35.1 1.4 20 1-20 10-29 (180)
13 3c8u_A Fructokinase; YP_612366 91.9 0.067 2.3E-06 35.4 1.8 21 1-21 27-47 (208)
14 1odf_A YGR205W, hypothetical 3 91.0 0.098 3.4E-06 37.3 1.9 22 1-22 36-57 (290)
15 1lvg_A Guanylate kinase, GMP k 90.6 0.12 4E-06 34.2 1.9 20 1-20 9-28 (198)
16 2f1r_A Molybdopterin-guanine d 90.0 0.075 2.6E-06 35.2 0.6 23 1-23 7-29 (171)
17 3a00_A Guanylate kinase, GMP k 89.7 0.13 4.3E-06 33.4 1.5 20 1-20 6-25 (186)
18 2qor_A Guanylate kinase; phosp 89.6 0.12 4.2E-06 33.9 1.4 20 1-20 17-36 (204)
19 2w0m_A SSO2452; RECA, SSPF, un 89.6 0.19 6.5E-06 32.5 2.3 22 1-22 28-49 (235)
20 3asz_A Uridine kinase; cytidin 89.6 0.14 4.7E-06 33.4 1.6 20 1-20 11-30 (211)
21 1jbk_A CLPB protein; beta barr 89.5 0.17 5.9E-06 31.2 1.9 22 1-22 48-69 (195)
22 3tr0_A Guanylate kinase, GMP k 89.3 0.14 4.8E-06 32.9 1.5 20 1-20 12-31 (205)
23 3uie_A Adenylyl-sulfate kinase 89.1 0.19 6.3E-06 32.9 2.0 21 1-21 30-50 (200)
24 2eyu_A Twitching motility prot 88.9 0.18 6.3E-06 35.2 1.9 22 1-22 30-51 (261)
25 1cke_A CK, MSSA, protein (cyti 88.4 0.22 7.4E-06 32.6 1.9 20 1-20 10-29 (227)
26 3aez_A Pantothenate kinase; tr 88.2 0.21 7.3E-06 35.9 1.9 21 1-21 95-115 (312)
27 2j41_A Guanylate kinase; GMP, 88.2 0.14 4.7E-06 33.0 0.9 20 1-20 11-30 (207)
28 1z6g_A Guanylate kinase; struc 88.1 0.19 6.4E-06 33.8 1.5 20 1-20 28-47 (218)
29 3ake_A Cytidylate kinase; CMP 88.1 0.24 8.1E-06 31.8 2.0 20 1-20 7-26 (208)
30 3tau_A Guanylate kinase, GMP k 87.9 0.15 5.1E-06 33.8 0.9 19 2-20 14-32 (208)
31 2p65_A Hypothetical protein PF 87.8 0.23 7.8E-06 30.8 1.7 22 1-22 48-69 (187)
32 4e22_A Cytidylate kinase; P-lo 87.5 0.22 7.6E-06 34.1 1.6 20 1-20 32-51 (252)
33 1rz3_A Hypothetical protein rb 87.4 0.23 7.7E-06 32.6 1.6 20 1-20 27-46 (201)
34 2jeo_A Uridine-cytidine kinase 87.3 0.27 9.4E-06 33.2 2.0 20 1-20 30-49 (245)
35 1ex7_A Guanylate kinase; subst 87.2 0.24 8.2E-06 33.3 1.6 19 1-19 6-24 (186)
36 1znw_A Guanylate kinase, GMP k 87.2 0.31 1E-05 32.1 2.1 19 2-20 26-44 (207)
37 4fcw_A Chaperone protein CLPB; 87.2 0.29 9.8E-06 33.5 2.0 20 2-21 53-72 (311)
38 3vaa_A Shikimate kinase, SK; s 87.1 0.29 9.9E-06 31.9 1.9 20 1-20 30-49 (199)
39 1kht_A Adenylate kinase; phosp 87.1 0.3 1E-05 30.8 1.9 21 1-21 8-28 (192)
40 3ec2_A DNA replication protein 87.0 0.37 1.3E-05 30.7 2.4 20 2-21 44-63 (180)
41 1ofh_A ATP-dependent HSL prote 87.0 0.29 9.9E-06 33.2 1.9 20 1-20 55-74 (310)
42 1qhx_A CPT, protein (chloramph 86.8 0.25 8.7E-06 31.1 1.5 20 1-20 8-27 (178)
43 3t61_A Gluconokinase; PSI-biol 86.7 0.32 1.1E-05 31.5 2.0 20 1-20 23-42 (202)
44 2ehv_A Hypothetical protein PH 86.7 0.32 1.1E-05 31.9 2.0 21 1-21 35-55 (251)
45 3trf_A Shikimate kinase, SK; a 86.6 0.33 1.1E-05 30.8 2.0 20 1-20 10-29 (185)
46 2w58_A DNAI, primosome compone 86.6 0.32 1.1E-05 31.4 2.0 22 1-22 59-80 (202)
47 4a74_A DNA repair and recombin 86.5 0.24 8.3E-06 32.1 1.3 20 1-20 30-49 (231)
48 3kb2_A SPBC2 prophage-derived 86.5 0.35 1.2E-05 29.9 2.0 20 1-20 6-25 (173)
49 1via_A Shikimate kinase; struc 86.4 0.34 1.2E-05 30.7 1.9 20 1-20 9-28 (175)
50 3jvv_A Twitching mobility prot 86.2 0.32 1.1E-05 35.7 2.0 23 1-23 128-150 (356)
51 3lw7_A Adenylate kinase relate 86.2 0.28 9.7E-06 30.0 1.4 18 1-19 6-23 (179)
52 2chg_A Replication factor C sm 86.2 0.36 1.2E-05 30.4 2.0 21 1-21 43-63 (226)
53 2iyv_A Shikimate kinase, SK; t 86.1 0.36 1.2E-05 30.7 2.0 20 1-20 7-26 (184)
54 1knq_A Gluconate kinase; ALFA/ 86.1 0.36 1.2E-05 30.4 2.0 20 1-20 13-32 (175)
55 2ewv_A Twitching motility prot 86.1 0.34 1.1E-05 35.5 2.0 22 1-22 141-162 (372)
56 3bos_A Putative DNA replicatio 85.9 0.37 1.3E-05 31.1 2.0 22 1-22 57-78 (242)
57 2cvh_A DNA repair and recombin 85.8 0.3 1E-05 31.5 1.5 18 1-18 25-42 (220)
58 4ag6_A VIRB4 ATPase, type IV s 85.8 0.36 1.2E-05 34.8 2.0 22 1-22 40-61 (392)
59 1e6c_A Shikimate kinase; phosp 85.7 0.39 1.3E-05 30.0 2.0 20 1-20 7-26 (173)
60 2dr3_A UPF0273 protein PH0284; 85.7 0.33 1.1E-05 31.8 1.6 22 1-22 28-49 (247)
61 2r62_A Cell division protease 85.5 0.57 1.9E-05 31.5 2.8 20 1-20 49-68 (268)
62 3b6e_A Interferon-induced heli 85.5 0.26 8.8E-06 31.6 1.0 22 2-23 54-75 (216)
63 4eun_A Thermoresistant glucoki 85.5 0.39 1.3E-05 31.3 1.9 20 1-20 34-53 (200)
64 2ze6_A Isopentenyl transferase 85.5 0.38 1.3E-05 33.0 1.9 20 1-20 6-25 (253)
65 1uf9_A TT1252 protein; P-loop, 85.4 0.29 9.9E-06 31.3 1.2 18 1-18 13-30 (203)
66 1xjc_A MOBB protein homolog; s 85.4 0.4 1.4E-05 32.0 1.9 23 1-23 9-31 (169)
67 3iij_A Coilin-interacting nucl 85.3 0.42 1.4E-05 30.3 2.0 20 1-20 16-35 (180)
68 3ney_A 55 kDa erythrocyte memb 85.1 0.32 1.1E-05 33.1 1.4 20 1-20 24-43 (197)
69 1n0w_A DNA repair protein RAD5 85.1 0.37 1.3E-05 31.6 1.6 19 1-19 29-47 (243)
70 1kag_A SKI, shikimate kinase I 85.1 0.37 1.3E-05 30.2 1.6 20 1-20 9-28 (173)
71 1ye8_A Protein THEP1, hypothet 85.1 0.42 1.4E-05 31.4 1.9 20 1-20 5-24 (178)
72 1np6_A Molybdopterin-guanine d 85.1 0.42 1.4E-05 31.6 1.9 23 1-23 11-33 (174)
73 3n70_A Transport activator; si 85.0 0.33 1.1E-05 30.3 1.3 19 1-19 29-47 (145)
74 2ius_A DNA translocase FTSK; n 84.9 0.4 1.4E-05 37.2 2.0 22 1-22 172-193 (512)
75 1sq5_A Pantothenate kinase; P- 84.7 0.37 1.2E-05 34.1 1.6 21 1-21 85-105 (308)
76 1p9r_A General secretion pathw 84.6 0.42 1.4E-05 35.9 2.0 21 1-21 172-192 (418)
77 3syl_A Protein CBBX; photosynt 84.6 0.38 1.3E-05 32.9 1.6 22 1-22 72-93 (309)
78 1njg_A DNA polymerase III subu 84.5 0.48 1.6E-05 30.0 2.0 21 1-21 50-70 (250)
79 2gza_A Type IV secretion syste 84.5 0.2 6.9E-06 36.5 0.1 20 1-20 180-199 (361)
80 1rif_A DAR protein, DNA helica 84.4 0.56 1.9E-05 32.1 2.4 22 1-22 133-154 (282)
81 2rhm_A Putative kinase; P-loop 84.4 0.41 1.4E-05 30.3 1.6 20 1-20 10-29 (193)
82 2pt5_A Shikimate kinase, SK; a 84.3 0.5 1.7E-05 29.4 2.0 20 1-20 5-24 (168)
83 1cr0_A DNA primase/helicase; R 84.2 0.41 1.4E-05 33.0 1.6 23 1-23 40-62 (296)
84 1s96_A Guanylate kinase, GMP k 84.2 0.38 1.3E-05 32.7 1.4 20 1-20 21-40 (219)
85 3tqc_A Pantothenate kinase; bi 84.1 0.46 1.6E-05 34.6 1.9 21 1-21 97-117 (321)
86 2bdt_A BH3686; alpha-beta prot 84.1 0.44 1.5E-05 30.5 1.6 18 1-18 7-24 (189)
87 3tqf_A HPR(Ser) kinase; transf 83.8 0.38 1.3E-05 33.1 1.3 18 1-18 21-38 (181)
88 2qt1_A Nicotinamide riboside k 83.8 0.22 7.5E-06 32.5 0.1 20 1-20 26-45 (207)
89 3d3q_A TRNA delta(2)-isopenten 83.6 0.43 1.5E-05 35.2 1.6 20 1-20 12-31 (340)
90 1lv7_A FTSH; alpha/beta domain 83.6 0.7 2.4E-05 31.0 2.6 19 2-20 51-69 (257)
91 2zts_A Putative uncharacterize 83.5 0.59 2E-05 30.6 2.1 20 1-20 35-54 (251)
92 2bbw_A Adenylate kinase 4, AK4 83.5 0.53 1.8E-05 31.6 1.9 20 1-20 32-51 (246)
93 2jaq_A Deoxyguanosine kinase; 83.5 0.55 1.9E-05 29.8 1.9 20 1-20 5-24 (205)
94 2bjv_A PSP operon transcriptio 83.2 0.36 1.2E-05 32.6 1.0 20 1-20 34-53 (265)
95 1zuh_A Shikimate kinase; alpha 83.2 0.59 2E-05 29.3 2.0 20 1-20 12-31 (168)
96 1gvn_B Zeta; postsegregational 83.1 0.45 1.5E-05 33.5 1.5 20 1-20 38-57 (287)
97 2fwr_A DNA repair protein RAD2 83.1 0.54 1.9E-05 34.2 1.9 20 1-20 113-132 (472)
98 1nks_A Adenylate kinase; therm 83.0 0.5 1.7E-05 29.7 1.6 21 1-21 6-26 (194)
99 2iut_A DNA translocase FTSK; n 82.9 0.54 1.9E-05 37.2 2.0 22 1-22 219-240 (574)
100 3hws_A ATP-dependent CLP prote 82.8 0.49 1.7E-05 33.7 1.6 19 2-20 57-75 (363)
101 2oca_A DAR protein, ATP-depend 82.8 0.58 2E-05 34.4 2.0 22 1-22 133-154 (510)
102 1tev_A UMP-CMP kinase; ploop, 82.8 0.62 2.1E-05 29.3 1.9 20 1-20 8-27 (196)
103 1htw_A HI0065; nucleotide-bind 82.7 0.71 2.4E-05 29.9 2.3 19 2-20 39-57 (158)
104 2qz4_A Paraplegin; AAA+, SPG7, 82.7 0.82 2.8E-05 30.3 2.6 19 2-20 45-63 (262)
105 1qf9_A UMP/CMP kinase, protein 82.6 0.53 1.8E-05 29.6 1.6 20 1-20 11-30 (194)
106 1gtv_A TMK, thymidylate kinase 82.6 0.31 1.1E-05 31.5 0.5 21 1-21 5-25 (214)
107 2kjq_A DNAA-related protein; s 82.3 0.65 2.2E-05 29.5 1.9 21 2-22 42-62 (149)
108 3llm_A ATP-dependent RNA helic 82.3 0.51 1.7E-05 31.6 1.4 17 1-17 81-97 (235)
109 2bwj_A Adenylate kinase 5; pho 82.2 0.56 1.9E-05 29.8 1.6 20 1-20 17-36 (199)
110 1d2n_A N-ethylmaleimide-sensit 82.1 0.65 2.2E-05 31.5 2.0 19 2-20 70-88 (272)
111 3r20_A Cytidylate kinase; stru 82.0 0.64 2.2E-05 32.3 1.9 20 1-20 14-33 (233)
112 4gl2_A Interferon-induced heli 81.6 0.84 2.9E-05 34.8 2.6 23 1-23 27-49 (699)
113 1a7j_A Phosphoribulokinase; tr 81.5 0.34 1.2E-05 34.3 0.3 20 1-20 10-29 (290)
114 1ixz_A ATP-dependent metallopr 81.5 0.81 2.8E-05 30.6 2.2 19 2-20 55-73 (254)
115 1zp6_A Hypothetical protein AT 81.4 0.49 1.7E-05 30.0 1.1 18 2-19 15-32 (191)
116 1uj2_A Uridine-cytidine kinase 81.3 0.63 2.1E-05 31.5 1.6 20 1-20 27-46 (252)
117 1ly1_A Polynucleotide kinase; 81.3 0.65 2.2E-05 28.9 1.6 18 1-18 7-24 (181)
118 3lnc_A Guanylate kinase, GMP k 81.2 0.35 1.2E-05 32.2 0.3 20 1-20 32-52 (231)
119 2yvu_A Probable adenylyl-sulfa 81.1 0.77 2.6E-05 29.3 1.9 21 1-21 18-38 (186)
120 3b9p_A CG5977-PA, isoform A; A 80.5 0.72 2.4E-05 31.5 1.7 19 2-20 60-78 (297)
121 3uk6_A RUVB-like 2; hexameric 80.4 0.67 2.3E-05 32.5 1.6 21 1-21 75-95 (368)
122 3t15_A Ribulose bisphosphate c 80.4 0.89 3E-05 31.8 2.2 19 2-20 42-60 (293)
123 1sxj_E Activator 1 40 kDa subu 80.3 0.64 2.2E-05 32.4 1.4 22 1-22 41-62 (354)
124 1jjv_A Dephospho-COA kinase; P 80.3 0.62 2.1E-05 30.2 1.3 18 1-18 7-24 (206)
125 3fb4_A Adenylate kinase; psych 80.2 0.86 2.9E-05 29.6 2.0 20 1-20 5-24 (216)
126 1knx_A Probable HPR(Ser) kinas 80.1 0.49 1.7E-05 34.7 0.8 18 1-18 152-169 (312)
127 2pbr_A DTMP kinase, thymidylat 80.1 0.89 3.1E-05 28.6 2.0 20 1-20 5-24 (195)
128 2p5t_B PEZT; postsegregational 79.9 0.61 2.1E-05 31.7 1.2 20 1-20 37-56 (253)
129 1l8q_A Chromosomal replication 79.9 0.87 3E-05 31.7 2.0 21 2-22 43-63 (324)
130 2pez_A Bifunctional 3'-phospho 79.7 0.92 3.1E-05 28.7 1.9 19 2-20 11-29 (179)
131 2c95_A Adenylate kinase 1; tra 79.5 0.79 2.7E-05 29.0 1.6 20 1-20 14-33 (196)
132 1e9r_A Conjugal transfer prote 79.4 0.8 2.7E-05 33.3 1.7 23 1-23 58-80 (437)
133 1um8_A ATP-dependent CLP prote 79.4 1 3.4E-05 32.2 2.2 19 2-20 78-96 (376)
134 2oap_1 GSPE-2, type II secreti 79.4 0.36 1.2E-05 37.1 -0.1 20 1-20 265-284 (511)
135 1ko7_A HPR kinase/phosphatase; 79.2 0.66 2.3E-05 33.9 1.3 19 1-19 149-167 (314)
136 1iy2_A ATP-dependent metallopr 79.1 1.1 3.6E-05 30.7 2.2 19 2-20 79-97 (278)
137 3h4m_A Proteasome-activating n 79.1 0.85 2.9E-05 30.8 1.7 19 2-20 57-75 (285)
138 3kta_A Chromosome segregation 79.1 0.71 2.4E-05 29.2 1.2 18 1-18 31-48 (182)
139 2v9p_A Replication protein E1; 78.9 1.2 4.2E-05 32.1 2.6 20 1-20 131-150 (305)
140 2fz4_A DNA repair protein RAD2 78.9 0.68 2.3E-05 31.4 1.2 20 1-20 113-132 (237)
141 3cm0_A Adenylate kinase; ATP-b 78.9 1 3.5E-05 28.4 1.9 20 1-20 9-28 (186)
142 1hqc_A RUVB; extended AAA-ATPa 78.8 0.82 2.8E-05 31.3 1.6 20 1-20 43-62 (324)
143 1sxj_C Activator 1 40 kDa subu 78.7 1.3 4.4E-05 31.1 2.6 21 2-22 52-72 (340)
144 2plr_A DTMP kinase, probable t 78.7 1 3.5E-05 28.7 1.9 21 1-21 9-29 (213)
145 1nlf_A Regulatory protein REPA 78.5 0.88 3E-05 31.2 1.6 21 1-21 35-55 (279)
146 2if2_A Dephospho-COA kinase; a 78.5 0.69 2.4E-05 29.8 1.1 18 1-18 6-23 (204)
147 2v1u_A Cell division control p 78.3 1.1 3.9E-05 30.9 2.2 22 1-22 49-70 (387)
148 1qde_A EIF4A, translation init 78.3 0.83 2.8E-05 29.7 1.4 19 2-20 57-76 (224)
149 2gxq_A Heat resistant RNA depe 78.1 1 3.6E-05 28.7 1.8 17 2-18 44-60 (207)
150 1wp9_A ATP-dependent RNA helic 77.9 1.1 3.9E-05 31.2 2.1 22 1-22 28-49 (494)
151 2h92_A Cytidylate kinase; ross 77.9 0.95 3.2E-05 29.5 1.6 20 1-20 8-27 (219)
152 2vli_A Antibiotic resistance p 77.8 0.6 2E-05 29.4 0.6 20 1-20 10-29 (183)
153 2i3b_A HCR-ntpase, human cance 77.7 1.1 3.9E-05 29.7 2.0 21 1-21 6-26 (189)
154 3cf0_A Transitional endoplasmi 77.7 1.3 4.3E-05 30.9 2.3 19 2-20 55-73 (301)
155 1ojl_A Transcriptional regulat 77.7 0.88 3E-05 32.1 1.5 19 1-19 30-48 (304)
156 3pfi_A Holliday junction ATP-d 77.7 0.95 3.2E-05 31.4 1.6 20 1-20 60-79 (338)
157 1rj9_A FTSY, signal recognitio 77.5 1.1 3.7E-05 32.1 2.0 21 1-21 107-127 (304)
158 3exa_A TRNA delta(2)-isopenten 77.4 0.75 2.6E-05 34.0 1.1 20 1-20 8-27 (322)
159 1m7g_A Adenylylsulfate kinase; 77.4 1.2 4E-05 29.2 2.0 21 1-21 30-50 (211)
160 1vht_A Dephospho-COA kinase; s 77.4 0.85 2.9E-05 29.8 1.3 18 1-18 9-26 (218)
161 2qmh_A HPR kinase/phosphorylas 77.3 0.72 2.5E-05 32.1 0.9 20 1-20 39-58 (205)
162 3co5_A Putative two-component 77.3 0.34 1.2E-05 30.2 -0.7 18 1-18 32-49 (143)
163 3dl0_A Adenylate kinase; phosp 77.2 0.97 3.3E-05 29.4 1.5 20 1-20 5-24 (216)
164 1sxj_D Activator 1 41 kDa subu 77.2 1.5 5.2E-05 30.2 2.6 21 2-22 64-84 (353)
165 3oiy_A Reverse gyrase helicase 77.1 1.8 6E-05 30.8 3.0 21 1-21 41-61 (414)
166 2chq_A Replication factor C sm 76.9 1.2 4.3E-05 30.0 2.0 20 2-21 44-63 (319)
167 1hv8_A Putative ATP-dependent 76.8 1.2 4.1E-05 30.4 1.9 20 2-21 50-69 (367)
168 3foz_A TRNA delta(2)-isopenten 76.8 0.95 3.2E-05 33.3 1.5 20 1-20 15-34 (316)
169 4a2p_A RIG-I, retinoic acid in 76.7 1.2 4.1E-05 32.5 2.0 22 2-23 28-49 (556)
170 1g8p_A Magnesium-chelatase 38 76.7 0.69 2.4E-05 32.0 0.7 21 1-21 50-70 (350)
171 3iuy_A Probable ATP-dependent 76.6 1.3 4.4E-05 29.0 2.0 17 2-18 63-79 (228)
172 2cdn_A Adenylate kinase; phosp 76.6 1.3 4.3E-05 28.6 1.9 20 1-20 25-44 (201)
173 3fdi_A Uncharacterized protein 76.6 0.9 3.1E-05 30.2 1.2 20 1-20 11-30 (201)
174 3tif_A Uncharacterized ABC tra 76.6 0.91 3.1E-05 31.0 1.3 18 1-18 36-53 (235)
175 1fnn_A CDC6P, cell division co 76.5 1.2 4.2E-05 31.0 1.9 22 1-22 49-70 (389)
176 1ukz_A Uridylate kinase; trans 76.5 1 3.6E-05 28.9 1.5 20 1-20 20-39 (203)
177 3ly5_A ATP-dependent RNA helic 76.4 1.5 5.2E-05 29.8 2.4 20 2-21 97-116 (262)
178 1t6n_A Probable ATP-dependent 76.4 1.2 4.2E-05 28.8 1.8 20 2-21 57-76 (220)
179 2pt7_A CAG-ALFA; ATPase, prote 76.4 0.41 1.4E-05 34.5 -0.5 20 1-20 176-195 (330)
180 2pl3_A Probable ATP-dependent 76.3 1.3 4.5E-05 29.1 2.0 17 2-18 68-84 (236)
181 3crm_A TRNA delta(2)-isopenten 76.3 0.99 3.4E-05 33.0 1.5 20 1-20 10-29 (323)
182 1in4_A RUVB, holliday junction 76.0 1.7 5.8E-05 30.8 2.6 19 2-20 57-75 (334)
183 3tbk_A RIG-I helicase domain; 75.9 1.3 4.4E-05 32.1 2.0 22 2-23 25-46 (555)
184 4gp7_A Metallophosphoesterase; 75.9 0.85 2.9E-05 29.2 0.9 15 1-15 14-28 (171)
185 3eph_A TRNA isopentenyltransfe 75.8 1.1 3.7E-05 34.1 1.6 20 1-20 7-26 (409)
186 3nwj_A ATSK2; P loop, shikimat 75.8 1.3 4.5E-05 30.8 2.0 20 1-20 53-72 (250)
187 3b9q_A Chloroplast SRP recepto 75.6 1.3 4.5E-05 31.5 1.9 22 1-22 105-126 (302)
188 2z0h_A DTMP kinase, thymidylat 75.6 1.4 4.9E-05 27.8 2.0 20 1-20 5-24 (197)
189 1qvr_A CLPB protein; coiled co 75.5 1.4 4.9E-05 35.3 2.3 21 1-21 593-613 (854)
190 1q3t_A Cytidylate kinase; nucl 75.4 1.4 4.9E-05 29.3 2.0 20 1-20 21-40 (236)
191 3bor_A Human initiation factor 75.3 1.3 4.3E-05 29.5 1.7 18 2-19 73-90 (237)
192 1zak_A Adenylate kinase; ATP:A 75.1 1.2 4.2E-05 29.2 1.6 19 2-20 11-29 (222)
193 2d2e_A SUFC protein; ABC-ATPas 75.0 1.5 5.2E-05 30.1 2.1 19 1-19 34-52 (250)
194 1vec_A ATP-dependent RNA helic 74.9 1.4 4.7E-05 28.2 1.8 18 2-19 46-63 (206)
195 1sxj_B Activator 1 37 kDa subu 74.9 1.8 6.1E-05 29.3 2.4 22 1-22 47-68 (323)
196 1y63_A LMAJ004144AAA protein; 74.7 1.4 4.9E-05 28.2 1.8 19 1-19 15-33 (184)
197 3e70_C DPA, signal recognition 74.6 1.4 4.9E-05 31.9 1.9 22 1-22 134-155 (328)
198 1pzn_A RAD51, DNA repair and r 74.5 1.1 3.7E-05 32.5 1.3 20 1-20 136-155 (349)
199 2grj_A Dephospho-COA kinase; T 74.5 1.5 5.2E-05 29.1 2.0 19 1-19 17-35 (192)
200 1iqp_A RFCS; clamp loader, ext 74.5 1.5 5.2E-05 29.7 2.0 20 2-21 52-71 (327)
201 4g1u_C Hemin import ATP-bindin 74.3 1.5 5E-05 30.7 1.9 18 1-18 42-59 (266)
202 1jr3_A DNA polymerase III subu 74.3 1.5 5.2E-05 30.4 2.0 22 1-22 43-64 (373)
203 2onk_A Molybdate/tungstate ABC 74.3 1.6 5.5E-05 30.0 2.0 18 2-19 30-47 (240)
204 2wwf_A Thymidilate kinase, put 74.2 1.4 4.6E-05 28.3 1.6 20 1-20 15-34 (212)
205 1nn5_A Similar to deoxythymidy 73.8 1.4 4.8E-05 28.2 1.6 20 1-20 14-33 (215)
206 1lw7_A Transcriptional regulat 73.6 1.7 5.9E-05 31.1 2.1 19 2-20 176-194 (365)
207 1zd8_A GTP:AMP phosphotransfer 73.5 1.1 3.9E-05 29.5 1.1 20 1-20 12-31 (227)
208 1r6b_X CLPA protein; AAA+, N-t 73.4 1.5 5.2E-05 34.3 2.0 19 2-20 494-512 (758)
209 3ch4_B Pmkase, phosphomevalona 73.4 1.4 4.8E-05 30.3 1.6 20 1-20 16-35 (202)
210 3sop_A Neuronal-specific septi 73.3 1.4 4.9E-05 30.7 1.6 20 1-20 7-26 (270)
211 3pxi_A Negative regulator of g 73.3 1.5 5.3E-05 34.4 2.0 20 2-21 527-546 (758)
212 3nh6_A ATP-binding cassette SU 73.3 0.5 1.7E-05 34.0 -0.8 20 1-20 85-104 (306)
213 1g6h_A High-affinity branched- 73.1 1.7 5.7E-05 30.0 1.9 17 2-18 39-55 (257)
214 2qgz_A Helicase loader, putati 72.9 1.8 6E-05 30.7 2.0 21 1-21 157-177 (308)
215 2px0_A Flagellar biosynthesis 72.7 1.5 5.2E-05 31.1 1.6 22 1-22 110-131 (296)
216 1wrb_A DJVLGB; RNA helicase, D 72.7 1.8 6.3E-05 28.8 2.0 18 2-19 66-83 (253)
217 2qby_A CDC6 homolog 1, cell di 72.7 1.5 5E-05 30.3 1.6 21 2-22 51-71 (386)
218 3m6a_A ATP-dependent protease 72.7 1.7 5.8E-05 33.2 2.0 19 2-20 114-132 (543)
219 2zu0_C Probable ATP-dependent 72.6 1.4 4.8E-05 30.7 1.4 19 1-19 51-69 (267)
220 2pcj_A ABC transporter, lipopr 72.6 1.5 5E-05 29.7 1.5 17 2-18 36-52 (224)
221 3a4m_A L-seryl-tRNA(SEC) kinas 72.5 1.8 6.1E-05 29.6 1.9 21 1-21 9-29 (260)
222 3h1t_A Type I site-specific re 72.4 1.6 5.4E-05 33.0 1.8 23 2-24 204-226 (590)
223 3a8t_A Adenylate isopentenyltr 72.4 0.92 3.1E-05 33.6 0.5 20 1-20 45-64 (339)
224 1vma_A Cell division protein F 72.2 2 6.7E-05 30.8 2.2 22 1-22 109-130 (306)
225 2cbz_A Multidrug resistance-as 72.2 1.5 5.3E-05 29.9 1.6 19 1-19 36-54 (237)
226 1q0u_A Bstdead; DEAD protein, 72.2 1.4 4.9E-05 28.7 1.3 18 2-19 47-64 (219)
227 3ber_A Probable ATP-dependent 72.1 1.9 6.6E-05 29.1 2.0 18 2-19 86-103 (249)
228 2pze_A Cystic fibrosis transme 72.1 1.2 4E-05 30.3 0.9 19 1-19 39-57 (229)
229 2qby_B CDC6 homolog 3, cell di 72.0 1.5 5.3E-05 30.5 1.6 23 1-23 50-72 (384)
230 3dkp_A Probable ATP-dependent 71.9 2 6.8E-05 28.4 2.0 17 2-18 72-88 (245)
231 2x8a_A Nuclear valosin-contain 71.9 2.2 7.4E-05 29.6 2.3 18 2-19 50-67 (274)
232 1e4v_A Adenylate kinase; trans 71.9 1.6 5.6E-05 28.5 1.6 20 1-20 5-24 (214)
233 3eie_A Vacuolar protein sortin 71.8 2.5 8.6E-05 29.6 2.6 19 2-20 57-75 (322)
234 3pey_A ATP-dependent RNA helic 71.6 1.8 6.3E-05 29.8 1.8 19 2-20 50-68 (395)
235 2ff7_A Alpha-hemolysin translo 71.6 1.9 6.4E-05 29.7 1.9 19 1-19 40-58 (247)
236 1s2m_A Putative ATP-dependent 71.6 1.8 6.2E-05 30.2 1.8 19 2-20 64-82 (400)
237 1aky_A Adenylate kinase; ATP:A 71.6 2 6.8E-05 28.1 1.9 20 1-20 9-28 (220)
238 3tlx_A Adenylate kinase 2; str 71.5 1.9 6.6E-05 29.1 1.9 20 1-20 34-53 (243)
239 3eiq_A Eukaryotic initiation f 71.5 1.9 6.5E-05 30.1 1.9 19 1-19 82-100 (414)
240 1b0u_A Histidine permease; ABC 71.5 1.9 6.4E-05 29.9 1.9 17 2-18 38-54 (262)
241 2og2_A Putative signal recogni 71.5 1.9 6.4E-05 31.8 1.9 22 1-22 162-183 (359)
242 1mv5_A LMRA, multidrug resista 71.4 1.4 4.9E-05 30.0 1.3 19 1-19 33-51 (243)
243 2ykg_A Probable ATP-dependent 71.3 1.9 6.5E-05 32.8 2.0 23 1-23 33-55 (696)
244 3gfo_A Cobalt import ATP-bindi 71.3 1.9 6.5E-05 30.4 1.9 18 1-18 39-56 (275)
245 3bh0_A DNAB-like replicative h 71.3 2 6.8E-05 30.4 2.0 22 1-22 73-94 (315)
246 3hdt_A Putative kinase; struct 71.2 1.7 5.8E-05 29.7 1.6 20 1-20 19-38 (223)
247 3u61_B DNA polymerase accessor 71.2 2.1 7E-05 29.6 2.0 19 2-20 54-72 (324)
248 2zj8_A DNA helicase, putative 71.1 1.7 5.7E-05 33.8 1.7 21 1-21 44-65 (720)
249 3d8b_A Fidgetin-like protein 1 71.1 1.7 5.9E-05 31.1 1.7 19 2-20 123-141 (357)
250 2z43_A DNA repair and recombin 70.7 1.5 5.2E-05 31.0 1.3 20 1-20 112-131 (324)
251 3b85_A Phosphate starvation-in 70.7 1.8 6.1E-05 29.1 1.6 18 2-19 28-45 (208)
252 1xwi_A SKD1 protein; VPS4B, AA 70.5 2.4 8.3E-05 29.9 2.3 19 2-20 51-69 (322)
253 1xti_A Probable ATP-dependent 70.5 2 7E-05 29.7 1.9 19 2-20 51-69 (391)
254 2z0m_A 337AA long hypothetical 70.4 2 6.8E-05 29.0 1.8 17 2-18 37-53 (337)
255 2qp9_X Vacuolar protein sortin 70.3 2.7 9.3E-05 30.1 2.6 19 2-20 90-108 (355)
256 1ji0_A ABC transporter; ATP bi 70.3 2.1 7.2E-05 29.2 1.9 17 2-18 38-54 (240)
257 2ghi_A Transport protein; mult 70.2 1.8 6.2E-05 30.0 1.6 19 2-20 52-70 (260)
258 3kl4_A SRP54, signal recogniti 70.2 2.6 9E-05 31.9 2.6 23 1-23 102-124 (433)
259 2ixe_A Antigen peptide transpo 69.8 1.4 4.8E-05 30.8 0.9 19 1-19 50-68 (271)
260 2xb4_A Adenylate kinase; ATP-b 69.6 2.3 7.9E-05 28.2 1.9 20 1-20 5-24 (223)
261 3te6_A Regulatory protein SIR3 69.5 1.8 6E-05 31.5 1.4 22 1-22 50-71 (318)
262 1w5s_A Origin recognition comp 69.5 3.4 0.00012 29.0 2.9 22 1-22 57-78 (412)
263 2olj_A Amino acid ABC transpor 69.4 2.2 7.6E-05 29.8 1.9 18 2-19 56-73 (263)
264 1sgw_A Putative ABC transporte 69.4 2.3 7.7E-05 28.9 1.9 18 2-19 41-58 (214)
265 3dmq_A RNA polymerase-associat 69.1 2.8 9.5E-05 34.3 2.6 24 1-24 175-198 (968)
266 3fmp_B ATP-dependent RNA helic 69.0 1.9 6.4E-05 31.5 1.5 17 2-18 137-153 (479)
267 1ak2_A Adenylate kinase isoenz 68.5 2.5 8.6E-05 28.1 1.9 19 2-20 22-40 (233)
268 3fht_A ATP-dependent RNA helic 68.3 2.4 8.1E-05 29.5 1.8 17 2-18 70-86 (412)
269 3fe2_A Probable ATP-dependent 68.3 2.2 7.6E-05 28.3 1.6 18 2-19 72-89 (242)
270 3auy_A DNA double-strand break 68.3 1.1 3.9E-05 32.2 0.2 16 1-16 30-45 (371)
271 2v54_A DTMP kinase, thymidylat 68.2 1.7 5.7E-05 27.7 0.9 20 1-20 9-28 (204)
272 2r6a_A DNAB helicase, replicat 68.1 2.5 8.5E-05 31.3 2.0 22 1-22 208-229 (454)
273 2yz2_A Putative ABC transporte 68.1 2.5 8.5E-05 29.3 1.9 17 2-18 39-55 (266)
274 1tf7_A KAIC; homohexamer, hexa 68.0 2.1 7.2E-05 32.3 1.6 21 1-21 286-306 (525)
275 1sxj_A Activator 1 95 kDa subu 68.0 2.1 7.3E-05 32.2 1.6 20 1-20 82-101 (516)
276 1vpl_A ABC transporter, ATP-bi 67.9 2.5 8.5E-05 29.4 1.9 17 2-18 47-63 (256)
277 4f92_B U5 small nuclear ribonu 67.8 5.4 0.00019 35.0 4.3 51 2-52 948-998 (1724)
278 2oxc_A Probable ATP-dependent 67.8 2.5 8.7E-05 27.8 1.8 19 2-20 67-86 (230)
279 2ihy_A ABC transporter, ATP-bi 67.5 2.5 8.7E-05 29.7 1.9 18 2-19 53-70 (279)
280 3k1j_A LON protease, ATP-depen 67.3 1.7 5.7E-05 33.5 0.9 20 1-20 65-84 (604)
281 2nq2_C Hypothetical ABC transp 67.3 2.7 9.2E-05 29.0 1.9 18 2-19 37-54 (253)
282 3ozx_A RNAse L inhibitor; ATP 67.2 1.9 6.5E-05 33.2 1.3 18 1-18 299-316 (538)
283 2z83_A Helicase/nucleoside tri 67.2 1.6 5.6E-05 32.3 0.9 21 1-21 26-47 (459)
284 3vfd_A Spastin; ATPase, microt 67.1 2.3 8E-05 30.5 1.7 20 1-20 153-172 (389)
285 3rlf_A Maltose/maltodextrin im 66.9 2.8 9.4E-05 31.3 2.0 18 2-19 35-52 (381)
286 2qi9_C Vitamin B12 import ATP- 66.6 2.7 9.4E-05 29.0 1.9 18 2-19 32-49 (249)
287 1ltq_A Polynucleotide kinase; 66.6 2.4 8.4E-05 28.9 1.6 19 1-19 7-25 (301)
288 1a5t_A Delta prime, HOLB; zinc 66.5 2.6 8.8E-05 29.8 1.8 23 2-24 30-52 (334)
289 1v5w_A DMC1, meiotic recombina 66.4 2.6 8.9E-05 30.2 1.8 19 1-19 127-145 (343)
290 1zu4_A FTSY; GTPase, signal re 66.2 3.2 0.00011 29.8 2.2 23 1-23 110-132 (320)
291 1yqt_A RNAse L inhibitor; ATP- 66.2 2.2 7.6E-05 32.7 1.4 18 1-18 317-334 (538)
292 3pvs_A Replication-associated 66.1 3.2 0.00011 31.1 2.3 19 2-20 56-74 (447)
293 2c9o_A RUVB-like 1; hexameric 66.1 2.8 9.5E-05 31.0 1.9 20 1-20 68-87 (456)
294 4a2q_A RIG-I, retinoic acid in 66.0 2.8 9.5E-05 33.1 2.0 24 1-24 268-291 (797)
295 2va8_A SSO2462, SKI2-type heli 66.0 2.8 9.7E-05 32.4 2.0 18 1-18 51-68 (715)
296 1nij_A Hypothetical protein YJ 65.9 1.9 6.5E-05 30.5 1.0 19 1-19 9-27 (318)
297 2z4s_A Chromosomal replication 65.9 3.8 0.00013 30.4 2.6 22 2-23 136-157 (440)
298 3tui_C Methionine import ATP-b 65.7 3 0.0001 30.9 2.0 17 2-18 60-76 (366)
299 1fuu_A Yeast initiation factor 65.7 2.7 9.3E-05 29.1 1.7 17 2-18 64-80 (394)
300 2i1q_A DNA repair and recombin 65.5 2.4 8.2E-05 29.6 1.4 19 1-19 103-121 (322)
301 2r44_A Uncharacterized protein 65.5 2.7 9.4E-05 29.1 1.7 19 2-20 52-70 (331)
302 2j0s_A ATP-dependent RNA helic 65.5 2.5 8.6E-05 29.7 1.5 19 2-20 80-98 (410)
303 2f6r_A COA synthase, bifunctio 65.4 1.9 6.6E-05 30.0 0.9 18 1-18 80-97 (281)
304 3j16_B RLI1P; ribosome recycli 65.3 2.3 8E-05 33.3 1.5 18 1-18 383-400 (608)
305 3fho_A ATP-dependent RNA helic 65.3 2.6 8.8E-05 31.5 1.6 19 2-20 164-182 (508)
306 1qhl_A Protein (cell division 65.1 3.3 0.00011 28.5 2.1 19 2-20 33-51 (227)
307 2ffh_A Protein (FFH); SRP54, s 65.0 3.1 0.00011 31.4 2.0 23 1-23 103-125 (425)
308 1ls1_A Signal recognition part 64.9 3.5 0.00012 29.0 2.2 21 2-22 104-124 (295)
309 3fvq_A Fe(3+) IONS import ATP- 64.8 2.8 9.5E-05 31.0 1.7 18 2-19 36-53 (359)
310 2zr9_A Protein RECA, recombina 64.0 2.9 9.9E-05 30.3 1.6 22 1-22 66-87 (349)
311 2pjz_A Hypothetical protein ST 64.0 3.3 0.00011 28.9 1.9 18 2-19 36-53 (263)
312 2yhs_A FTSY, cell division pro 64.0 3.2 0.00011 32.3 1.9 22 1-22 298-319 (503)
313 1z47_A CYSA, putative ABC-tran 64.0 3.5 0.00012 30.3 2.1 18 2-19 47-64 (355)
314 1tf7_A KAIC; homohexamer, hexa 63.7 2.3 7.8E-05 32.1 1.1 22 1-22 44-66 (525)
315 2i4i_A ATP-dependent RNA helic 63.6 3.5 0.00012 28.8 2.0 21 2-22 58-79 (417)
316 3lda_A DNA repair protein RAD5 63.1 2.6 9E-05 31.3 1.3 18 1-18 183-200 (400)
317 2it1_A 362AA long hypothetical 63.0 3.7 0.00013 30.2 2.0 18 2-19 35-52 (362)
318 2yyz_A Sugar ABC transporter, 62.7 3.8 0.00013 30.1 2.1 18 2-19 35-52 (359)
319 3be4_A Adenylate kinase; malar 62.6 3.2 0.00011 27.2 1.6 19 2-20 11-29 (217)
320 2v6i_A RNA helicase; membrane, 62.6 2 7E-05 31.5 0.6 20 2-21 8-28 (431)
321 2q6t_A DNAB replication FORK h 62.6 3.1 0.00011 30.7 1.6 22 1-22 205-226 (444)
322 1u94_A RECA protein, recombina 62.5 4 0.00014 29.8 2.1 22 1-22 68-89 (356)
323 1g29_1 MALK, maltose transport 62.2 3.9 0.00013 30.1 2.1 18 2-19 35-52 (372)
324 3b5x_A Lipid A export ATP-bind 62.0 2.7 9.4E-05 32.2 1.3 19 2-20 375-393 (582)
325 2xxa_A Signal recognition part 61.9 4 0.00014 30.6 2.1 23 1-23 105-127 (433)
326 1yrb_A ATP(GTP)binding protein 61.9 4.1 0.00014 26.9 2.0 20 2-21 20-39 (262)
327 4eaq_A DTMP kinase, thymidylat 61.7 4 0.00014 27.5 1.9 20 2-21 32-51 (229)
328 1svm_A Large T antigen; AAA+ f 61.5 3.9 0.00013 30.2 2.0 20 1-20 174-193 (377)
329 3l9o_A ATP-dependent RNA helic 61.4 3.7 0.00012 34.4 2.0 53 1-55 204-256 (1108)
330 2vp4_A Deoxynucleoside kinase; 61.2 1.9 6.6E-05 28.7 0.2 19 1-19 25-43 (230)
331 1gm5_A RECG; helicase, replica 61.1 3.9 0.00013 33.0 2.1 21 2-22 395-415 (780)
332 3i5x_A ATP-dependent RNA helic 61.0 4.1 0.00014 30.2 2.0 19 2-20 117-135 (563)
333 1v43_A Sugar-binding transport 61.0 4.2 0.00014 30.0 2.0 18 2-19 43-60 (372)
334 3dm5_A SRP54, signal recogniti 60.8 4.1 0.00014 31.0 2.0 23 1-23 105-127 (443)
335 2bbs_A Cystic fibrosis transme 60.8 3 0.0001 29.6 1.2 18 2-19 70-87 (290)
336 3d31_A Sulfate/molybdate ABC t 60.7 3.4 0.00012 30.2 1.5 17 2-18 32-48 (348)
337 3cr8_A Sulfate adenylyltranfer 60.6 2.7 9.4E-05 32.6 1.0 20 2-21 375-394 (552)
338 2yv5_A YJEQ protein; hydrolase 60.3 3.4 0.00012 29.0 1.5 17 1-17 170-186 (302)
339 1j8m_F SRP54, signal recogniti 60.3 3.9 0.00013 28.9 1.7 22 1-22 103-124 (297)
340 4a1f_A DNAB helicase, replicat 60.2 3.7 0.00013 30.0 1.6 22 1-22 51-72 (338)
341 2axn_A 6-phosphofructo-2-kinas 60.1 4.1 0.00014 31.1 1.9 20 1-20 40-59 (520)
342 2obl_A ESCN; ATPase, hydrolase 59.7 3.9 0.00013 29.7 1.7 19 2-20 77-95 (347)
343 2qm8_A GTPase/ATPase; G protei 59.7 4.4 0.00015 29.1 1.9 21 1-21 60-80 (337)
344 3gd7_A Fusion complex of cysti 59.6 3.9 0.00013 30.4 1.7 19 2-20 53-71 (390)
345 2wsm_A Hydrogenase expression/ 59.5 4 0.00014 26.2 1.6 20 1-20 35-54 (221)
346 3pxg_A Negative regulator of g 59.4 5.3 0.00018 29.8 2.4 21 2-22 207-227 (468)
347 2zan_A Vacuolar protein sortin 59.3 3.6 0.00012 30.5 1.4 19 2-20 173-191 (444)
348 1oxx_K GLCV, glucose, ABC tran 59.0 3.1 0.00011 30.4 1.1 18 2-19 37-54 (353)
349 2p6r_A Afuhel308 helicase; pro 58.9 3 0.0001 32.3 1.0 19 1-19 45-63 (702)
350 2xgj_A ATP-dependent RNA helic 58.8 4.4 0.00015 33.5 2.0 51 1-53 106-156 (1010)
351 3fmo_B ATP-dependent RNA helic 58.8 4.5 0.00015 28.2 1.8 15 2-16 137-151 (300)
352 1f2t_A RAD50 ABC-ATPase; DNA d 58.1 5.3 0.00018 25.2 1.9 17 1-17 28-44 (149)
353 4a4z_A Antiviral helicase SKI2 58.1 4.3 0.00015 33.5 1.8 20 2-21 60-79 (997)
354 3sr0_A Adenylate kinase; phosp 57.9 6.9 0.00023 26.2 2.6 19 2-20 6-24 (206)
355 2dpy_A FLII, flagellum-specifi 57.9 4.4 0.00015 30.4 1.7 19 2-20 163-181 (438)
356 3qf7_A RAD50; ABC-ATPase, ATPa 57.7 4.6 0.00016 29.2 1.8 20 1-20 28-47 (365)
357 2ocp_A DGK, deoxyguanosine kin 57.7 3.4 0.00012 27.4 1.0 20 1-20 7-26 (241)
358 1z63_A Helicase of the SNF2/RA 57.6 5.8 0.0002 28.9 2.3 22 2-23 62-83 (500)
359 3zvl_A Bifunctional polynucleo 57.3 2.7 9.1E-05 31.0 0.5 19 1-19 263-281 (416)
360 3rc3_A ATP-dependent RNA helic 57.2 4.2 0.00014 32.3 1.6 19 2-23 161-179 (677)
361 2jlq_A Serine protease subunit 56.7 2.9 0.0001 30.8 0.6 20 2-21 25-45 (451)
362 2npi_A Protein CLP1; CLP1-PCF1 56.4 4.1 0.00014 30.8 1.4 20 2-21 144-163 (460)
363 4dzz_A Plasmid partitioning pr 56.4 10 0.00035 23.9 3.1 22 2-23 8-29 (206)
364 3g5u_A MCG1178, multidrug resi 56.1 3 0.0001 35.2 0.6 20 1-20 1064-1083(1284)
365 4edh_A DTMP kinase, thymidylat 56.1 7.6 0.00026 26.0 2.6 21 2-22 12-32 (213)
366 4a2w_A RIG-I, retinoic acid in 56.0 3.7 0.00013 33.3 1.1 23 1-23 268-290 (936)
367 1yks_A Genome polyprotein [con 55.9 3.4 0.00012 30.4 0.9 15 1-15 13-27 (440)
368 3hu3_A Transitional endoplasmi 55.6 5.7 0.00019 30.1 2.0 18 2-19 244-261 (489)
369 1r6b_X CLPA protein; AAA+, N-t 55.2 7 0.00024 30.5 2.6 21 2-22 213-233 (758)
370 3pxi_A Negative regulator of g 55.1 6.7 0.00023 30.8 2.4 21 2-22 207-227 (758)
371 3qks_A DNA double-strand break 55.0 6.2 0.00021 26.0 1.9 18 1-18 28-45 (203)
372 4b3f_X DNA-binding protein smu 54.9 6.4 0.00022 30.4 2.3 24 1-24 210-233 (646)
373 3euj_A Chromosome partition pr 54.7 5.7 0.0002 30.5 1.9 20 1-20 34-53 (483)
374 3b60_A Lipid A export ATP-bind 54.5 4.2 0.00014 31.1 1.2 19 2-20 375-393 (582)
375 2f9l_A RAB11B, member RAS onco 54.0 7.2 0.00025 24.6 2.1 17 2-18 11-27 (199)
376 3hr8_A Protein RECA; alpha and 54.0 5.4 0.00019 29.3 1.6 22 1-22 66-87 (356)
377 1ypw_A Transitional endoplasmi 54.0 8 0.00027 31.1 2.7 20 1-20 516-535 (806)
378 1e69_A Chromosome segregation 53.7 3.6 0.00012 28.9 0.6 17 1-17 29-45 (322)
379 3upu_A ATP-dependent DNA helic 53.7 9 0.00031 28.2 2.8 23 2-24 51-73 (459)
380 3bk7_A ABC transporter ATP-bin 53.3 5 0.00017 31.4 1.4 18 1-18 387-404 (607)
381 3qf4_B Uncharacterized ABC tra 53.2 4.3 0.00015 31.2 1.0 19 2-20 387-405 (598)
382 3ld9_A DTMP kinase, thymidylat 52.6 7 0.00024 26.7 2.0 21 2-22 27-47 (223)
383 3umf_A Adenylate kinase; rossm 52.3 9.3 0.00032 26.0 2.5 19 2-20 35-53 (217)
384 2yl4_A ATP-binding cassette SU 52.1 4.4 0.00015 31.1 0.9 19 2-20 376-394 (595)
385 1bif_A 6-phosphofructo-2-kinas 52.1 6.8 0.00023 29.1 1.9 21 1-21 44-64 (469)
386 2fna_A Conserved hypothetical 51.9 6.2 0.00021 26.7 1.6 20 1-20 35-54 (357)
387 3lv8_A DTMP kinase, thymidylat 51.4 6.4 0.00022 27.1 1.6 21 2-22 33-53 (236)
388 3ux8_A Excinuclease ABC, A sub 51.4 3 0.0001 32.4 -0.1 17 1-17 353-369 (670)
389 2dhr_A FTSH; AAA+ protein, hex 51.2 8.2 0.00028 29.6 2.3 19 2-20 70-88 (499)
390 2b8t_A Thymidine kinase; deoxy 51.2 8.5 0.00029 26.3 2.2 20 2-21 18-37 (223)
391 2ga8_A Hypothetical 39.9 kDa p 51.1 7.2 0.00025 29.0 1.9 20 1-20 29-48 (359)
392 1pui_A ENGB, probable GTP-bind 51.0 3 0.0001 26.5 -0.2 17 1-17 31-47 (210)
393 1tue_A Replication protein E1; 51.0 6.8 0.00023 27.3 1.7 21 1-21 63-83 (212)
394 1yqt_A RNAse L inhibitor; ATP- 50.8 7.5 0.00026 29.7 2.0 17 2-18 53-69 (538)
395 2db3_A ATP-dependent RNA helic 50.8 7.6 0.00026 28.2 2.0 21 2-22 99-120 (434)
396 1byi_A Dethiobiotin synthase; 50.8 11 0.00037 24.3 2.6 23 2-24 8-30 (224)
397 1oix_A RAS-related protein RAB 50.5 7.3 0.00025 24.7 1.7 17 2-18 35-51 (191)
398 1m8p_A Sulfate adenylyltransfe 50.4 7.4 0.00025 30.2 2.0 21 1-21 401-421 (573)
399 3sqw_A ATP-dependent RNA helic 50.3 7.7 0.00026 29.2 2.0 18 2-19 66-83 (579)
400 2v3c_C SRP54, signal recogniti 50.3 6.8 0.00023 29.3 1.7 22 1-22 104-125 (432)
401 1gku_B Reverse gyrase, TOP-RG; 50.2 9.2 0.00032 31.6 2.6 21 1-21 76-96 (1054)
402 2qag_B Septin-6, protein NEDD5 50.1 5.4 0.00019 30.2 1.1 19 1-19 47-65 (427)
403 2eyq_A TRCF, transcription-rep 50.1 6.9 0.00024 32.8 1.9 18 2-19 630-647 (1151)
404 1g41_A Heat shock protein HSLU 49.8 6.7 0.00023 29.8 1.6 20 1-20 55-74 (444)
405 3v9p_A DTMP kinase, thymidylat 49.8 8.4 0.00029 26.3 2.0 22 2-23 31-52 (227)
406 4tmk_A Protein (thymidylate ki 49.8 9.3 0.00032 25.7 2.2 22 2-23 9-30 (213)
407 4b4t_K 26S protease regulatory 49.7 10 0.00034 28.6 2.6 19 2-20 212-230 (428)
408 2ce7_A Cell division protein F 49.6 10 0.00034 28.9 2.6 19 2-20 55-73 (476)
409 3qf4_A ABC transporter, ATP-bi 49.5 4.4 0.00015 31.2 0.6 19 2-20 375-393 (587)
410 2wji_A Ferrous iron transport 49.5 7.1 0.00024 23.9 1.5 17 1-17 8-24 (165)
411 1ypw_A Transitional endoplasmi 49.4 6.4 0.00022 31.6 1.5 19 1-19 243-261 (806)
412 1w36_D RECD, exodeoxyribonucle 49.1 8 0.00027 29.9 2.0 23 1-23 169-191 (608)
413 4a82_A Cystic fibrosis transme 49.0 3.6 0.00012 31.5 -0.0 19 2-20 373-391 (578)
414 2hf9_A Probable hydrogenase ni 48.8 7.6 0.00026 24.9 1.6 20 1-20 43-62 (226)
415 3ozx_A RNAse L inhibitor; ATP 48.4 8 0.00027 29.7 1.9 17 2-18 31-47 (538)
416 1g3q_A MIND ATPase, cell divis 48.4 15 0.0005 23.8 3.0 23 2-24 9-31 (237)
417 1q57_A DNA primase/helicase; d 48.3 5.9 0.0002 29.5 1.1 22 1-22 247-268 (503)
418 3bgw_A DNAB-like replicative h 48.3 7.6 0.00026 29.0 1.7 23 1-23 202-224 (444)
419 1ny5_A Transcriptional regulat 48.2 6.5 0.00022 28.5 1.3 18 1-18 165-182 (387)
420 1xx6_A Thymidine kinase; NESG, 48.2 12 0.00042 24.8 2.6 18 2-19 14-32 (191)
421 1z2a_A RAS-related protein RAB 48.0 7.8 0.00027 23.1 1.5 18 1-18 10-27 (168)
422 3lxx_A GTPase IMAP family memb 48.0 7.4 0.00025 25.6 1.4 18 1-18 34-51 (239)
423 2zej_A Dardarin, leucine-rich 48.0 6 0.0002 24.7 0.9 17 1-17 7-23 (184)
424 1xp8_A RECA protein, recombina 48.0 7.7 0.00026 28.4 1.6 22 1-22 79-100 (366)
425 2r6f_A Excinuclease ABC subuni 47.8 5 0.00017 33.6 0.7 17 1-17 655-671 (972)
426 3kjh_A CO dehydrogenase/acetyl 47.7 10 0.00035 24.4 2.1 23 2-24 6-28 (254)
427 2dyk_A GTP-binding protein; GT 47.6 8.7 0.0003 22.8 1.6 17 1-17 6-22 (161)
428 4f4c_A Multidrug resistance pr 47.5 4 0.00014 34.6 0.0 19 2-20 450-468 (1321)
429 1u0l_A Probable GTPase ENGC; p 47.0 7.1 0.00024 27.3 1.3 16 2-17 175-190 (301)
430 4ddu_A Reverse gyrase; topoiso 46.9 10 0.00035 31.7 2.4 20 2-21 99-118 (1104)
431 4b4t_L 26S protease subunit RP 46.8 12 0.00041 28.3 2.6 19 2-20 221-239 (437)
432 2www_A Methylmalonic aciduria 46.7 9.5 0.00032 27.4 1.9 21 1-21 79-99 (349)
433 3j16_B RLI1P; ribosome recycli 46.7 9.4 0.00032 29.9 2.0 17 2-18 109-125 (608)
434 2ce2_X GTPase HRAS; signaling 46.6 7.7 0.00026 22.8 1.3 17 1-17 8-24 (166)
435 4b4t_M 26S protease regulatory 46.5 12 0.00041 28.3 2.6 19 2-20 221-239 (434)
436 3tmk_A Thymidylate kinase; pho 46.5 11 0.00039 25.5 2.2 21 2-22 11-31 (216)
437 2qag_C Septin-7; cell cycle, c 46.4 6.1 0.00021 29.5 0.9 18 1-18 36-53 (418)
438 4f4c_A Multidrug resistance pr 46.3 3.1 0.00011 35.3 -0.8 19 2-20 1111-1129(1321)
439 1u8z_A RAS-related protein RAL 45.8 8.9 0.0003 22.7 1.5 17 1-17 9-25 (168)
440 2ged_A SR-beta, signal recogni 45.8 9.3 0.00032 23.6 1.6 17 1-17 53-69 (193)
441 3io5_A Recombination and repai 45.8 9.4 0.00032 28.3 1.8 22 1-22 33-54 (333)
442 3qkt_A DNA double-strand break 45.5 10 0.00036 26.7 2.0 20 1-20 28-47 (339)
443 2p67_A LAO/AO transport system 45.2 8.8 0.0003 27.3 1.6 21 1-21 61-81 (341)
444 3q9l_A Septum site-determining 45.2 18 0.0006 23.7 3.0 22 2-23 9-30 (260)
445 2xau_A PRE-mRNA-splicing facto 45.1 8 0.00027 31.0 1.4 16 1-16 114-129 (773)
446 1g8f_A Sulfate adenylyltransfe 44.8 12 0.00041 28.9 2.3 21 2-22 401-421 (511)
447 1z0j_A RAB-22, RAS-related pro 44.7 10 0.00035 22.6 1.6 17 1-17 11-27 (170)
448 1c1y_A RAS-related protein RAP 44.7 9.5 0.00032 22.7 1.5 17 1-17 8-24 (167)
449 1tq4_A IIGP1, interferon-induc 44.5 7.2 0.00025 29.2 1.1 17 2-18 75-91 (413)
450 2gks_A Bifunctional SAT/APS ki 44.5 10 0.00035 29.2 2.0 20 2-21 378-397 (546)
451 4aby_A DNA repair protein RECN 44.5 4 0.00014 29.2 -0.4 16 2-17 66-81 (415)
452 3k9g_A PF-32 protein; ssgcid, 44.4 18 0.00062 24.0 3.0 20 2-21 34-53 (267)
453 1ky3_A GTP-binding protein YPT 44.3 10 0.00035 22.8 1.6 17 1-17 13-29 (182)
454 3pqc_A Probable GTP-binding pr 44.2 7.7 0.00026 23.8 1.0 17 1-17 28-44 (195)
455 2wjg_A FEOB, ferrous iron tran 44.2 9.6 0.00033 23.4 1.5 17 2-18 13-29 (188)
456 2erx_A GTP-binding protein DI- 44.1 9.6 0.00033 22.7 1.4 17 1-17 8-24 (172)
457 3p32_A Probable GTPase RV1496/ 44.0 11 0.00039 26.8 2.0 22 1-22 84-105 (355)
458 3of5_A Dethiobiotin synthetase 44.0 17 0.00057 24.5 2.8 21 4-24 13-33 (228)
459 2vhj_A Ntpase P4, P4; non- hyd 43.9 9.8 0.00034 28.1 1.7 19 1-19 128-146 (331)
460 1kao_A RAP2A; GTP-binding prot 43.8 11 0.00037 22.3 1.6 16 1-16 8-23 (167)
461 1ek0_A Protein (GTP-binding pr 43.7 11 0.00037 22.4 1.6 17 1-17 8-24 (170)
462 4b4t_J 26S protease regulatory 43.6 15 0.0005 27.7 2.6 19 2-20 188-206 (405)
463 1hyq_A MIND, cell division inh 43.6 14 0.00047 24.4 2.3 22 2-23 9-30 (263)
464 3szr_A Interferon-induced GTP- 43.6 13 0.00043 28.9 2.3 19 1-19 50-68 (608)
465 2qnr_A Septin-2, protein NEDD5 43.5 6.9 0.00024 27.4 0.8 16 2-17 24-39 (301)
466 2qen_A Walker-type ATPase; unk 42.8 10 0.00034 25.7 1.5 19 1-19 36-54 (350)
467 1wms_A RAB-9, RAB9, RAS-relate 42.6 11 0.00039 22.7 1.6 17 1-17 12-28 (177)
468 2orw_A Thymidine kinase; TMTK, 42.3 11 0.00038 24.4 1.6 18 2-19 9-27 (184)
469 2gk6_A Regulator of nonsense t 42.2 12 0.00041 28.9 2.0 22 1-22 200-221 (624)
470 2ygr_A Uvrabc system protein A 42.1 5.1 0.00018 33.6 -0.1 17 1-17 673-689 (993)
471 3nbx_X ATPase RAVA; AAA+ ATPas 41.5 10 0.00035 29.0 1.5 19 2-20 47-65 (500)
472 1z08_A RAS-related protein RAB 41.5 12 0.00042 22.3 1.6 17 1-17 11-27 (170)
473 4dsu_A GTPase KRAS, isoform 2B 41.4 12 0.00041 22.7 1.6 17 1-17 9-25 (189)
474 2rcn_A Probable GTPase ENGC; Y 41.4 10 0.00035 27.9 1.4 18 1-18 220-237 (358)
475 2j37_W Signal recognition part 41.3 14 0.00046 28.5 2.1 23 1-23 106-128 (504)
476 1x6v_B Bifunctional 3'-phospho 41.3 12 0.00042 29.7 2.0 19 2-20 58-76 (630)
477 3bk7_A ABC transporter ATP-bin 41.0 12 0.00042 29.2 1.9 16 2-17 123-138 (607)
478 1qvr_A CLPB protein; coiled co 40.9 14 0.00047 29.6 2.2 21 2-22 197-217 (854)
479 1nrj_B SR-beta, signal recogni 40.9 12 0.00042 23.7 1.6 18 1-18 17-34 (218)
480 2fn4_A P23, RAS-related protei 40.8 11 0.00036 22.8 1.2 18 1-18 14-31 (181)
481 3ice_A Transcription terminati 40.8 21 0.00072 27.3 3.1 21 2-22 180-200 (422)
482 2gj8_A MNME, tRNA modification 40.7 9.7 0.00033 23.6 1.1 18 1-18 9-26 (172)
483 1r2q_A RAS-related protein RAB 40.6 13 0.00045 22.0 1.6 17 1-17 11-27 (170)
484 2nzj_A GTP-binding protein REM 40.5 12 0.0004 22.5 1.4 16 1-16 9-24 (175)
485 3g5u_A MCG1178, multidrug resi 40.4 5.6 0.00019 33.6 -0.1 19 2-20 422-440 (1284)
486 1upt_A ARL1, ADP-ribosylation 40.3 13 0.00045 22.2 1.6 16 1-16 12-27 (171)
487 2xj4_A MIPZ; replication, cell 40.1 24 0.00083 24.0 3.1 23 2-24 11-33 (286)
488 1r8s_A ADP-ribosylation factor 40.1 13 0.00046 22.0 1.6 18 1-18 5-22 (164)
489 2lkc_A Translation initiation 39.9 12 0.00042 22.5 1.4 16 1-16 13-28 (178)
490 2ph1_A Nucleotide-binding prot 39.7 20 0.00068 24.0 2.6 22 2-23 25-46 (262)
491 3gmt_A Adenylate kinase; ssgci 39.7 19 0.00065 24.9 2.6 19 2-20 14-32 (230)
492 3kkq_A RAS-related protein M-R 39.5 13 0.00043 22.8 1.5 17 1-17 23-39 (183)
493 2a9k_A RAS-related protein RAL 39.4 13 0.00043 22.5 1.5 17 1-17 23-39 (187)
494 2whx_A Serine protease/ntpase/ 39.4 9.3 0.00032 29.8 1.0 21 2-22 192-213 (618)
495 3dzd_A Transcriptional regulat 39.3 13 0.00046 26.7 1.8 19 1-19 157-175 (368)
496 3qxc_A Dethiobiotin synthetase 39.0 21 0.00072 24.5 2.7 21 4-24 30-50 (242)
497 4b4t_H 26S protease regulatory 38.9 19 0.00064 27.8 2.6 19 2-20 249-267 (467)
498 1w1w_A Structural maintenance 38.7 12 0.00041 27.2 1.5 18 1-18 31-48 (430)
499 2g6b_A RAS-related protein RAB 38.5 14 0.0005 22.2 1.6 17 1-17 15-31 (180)
500 1g16_A RAS-related protein SEC 38.4 12 0.00042 22.2 1.3 17 1-17 8-24 (170)
No 1
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=99.93 E-value=5.9e-27 Score=187.78 Aligned_cols=76 Identities=29% Similarity=0.451 Sum_probs=67.7
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccCccchhhHHHHHHHH--HHHHhcCccccCCCCCCCccceEEEEeCCCCee
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRDTKFFDMFSTVIVSA--WFQAFGNAKTAHNNNSSRFGKFIQVNYKENGMV 78 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~~~~~~~l~~~i~~s--ileafGnAkT~~n~nSSrfGk~~~l~f~~~g~l 78 (80)
|.|||||||||++|++|+||+..+... ......++++|+++ ||||||||||.+||||||||||++|+|+.+|.|
T Consensus 99 isGESGAGKTe~tK~i~~yla~~~~~~----~~~~~~i~~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i 174 (697)
T 1lkx_A 99 ISGESGAGKTEASKKIMQFLTFVSSNQ----SPNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSP 174 (697)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHHSCSS----CHHHHHHHHHHHHHHHHHHHHHBBCCSSCSSCBCSEEEEEEEECTTCCE
T ss_pred ecCCCCCCchhhHHHHHHHHHhhcCCC----CCccccHHHHHHhcchHHHHhcCcccCCCCCcchhheeEEEEECCCCCE
Confidence 479999999999999999999987521 11236899999999 999999999999999999999999999999998
Q ss_pred cC
Q psy17057 79 HG 80 (80)
Q Consensus 79 ~G 80 (80)
+|
T Consensus 175 ~G 176 (697)
T 1lkx_A 175 IG 176 (697)
T ss_dssp EE
T ss_pred ee
Confidence 76
No 2
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=99.93 E-value=4e-27 Score=191.61 Aligned_cols=80 Identities=35% Similarity=0.534 Sum_probs=68.4
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccC----ccchhhHHHHHHHH--HHHHhcCccccCCCCCCCccceEEEEeCC
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRD----TKFFDMFSTVIVSA--WFQAFGNAKTAHNNNSSRFGKFIQVNYKE 74 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~----~~~~~~l~~~i~~s--ileafGnAkT~~n~nSSrfGk~~~l~f~~ 74 (80)
|.|||||||||++|++|+||+..+.+...++ ......++++|+++ ||||||||||.+||||||||||++|+|+.
T Consensus 174 iSGESGAGKTe~tK~i~~yla~~~~~~~~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i~F~~ 253 (837)
T 1kk8_A 174 ITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGP 253 (837)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHHSCCCCCC--------CCCHHHHHHHHHHHHHHHHEECCSSCTTEESSEEEEEEEECT
T ss_pred EeCCCCCCchhhHHHHHHHHHHhcccCCcccccccccccccHHHHHHHHHHHHHHhcCccCCCCCCCCCceeEEEEEECC
Confidence 4799999999999999999999876532111 11136799999999 99999999999999999999999999999
Q ss_pred CCeecC
Q psy17057 75 NGMVHG 80 (80)
Q Consensus 75 ~g~l~G 80 (80)
+|+|+|
T Consensus 254 ~g~i~G 259 (837)
T 1kk8_A 254 TGKIAG 259 (837)
T ss_dssp TSSEEE
T ss_pred CCCEee
Confidence 999876
No 3
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=99.93 E-value=6.6e-27 Score=189.53 Aligned_cols=74 Identities=24% Similarity=0.346 Sum_probs=67.2
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccCccchhhHHHHHHHH--HHHHhcCccccCCCCCCCccceEEEEeCCCCee
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRDTKFFDMFSTVIVSA--WFQAFGNAKTAHNNNSSRFGKFIQVNYKENGMV 78 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~~~~~~~l~~~i~~s--ileafGnAkT~~n~nSSrfGk~~~l~f~~~g~l 78 (80)
|.|||||||||++|++|+||+..+.+.. ...++++|+++ ||||||||||.+||||||||||++|+|+.+|+|
T Consensus 161 isGESGAGKTe~tK~i~~yla~~~~~~~------~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i 234 (795)
T 1w7j_A 161 VSGESGAGKTVSAKYAMRYFATVSGSAS------EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRI 234 (795)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHHTCCSS------SSCHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSCE
T ss_pred EeCCCCCCcchHHHHHHHHHHhhcCCCC------ccchHHHHHHHHHHHHHhcCccCCCCCCccccceEEEEEECCCCCE
Confidence 4799999999999999999998875421 15799999999 999999999999999999999999999999998
Q ss_pred cC
Q psy17057 79 HG 80 (80)
Q Consensus 79 ~G 80 (80)
+|
T Consensus 235 ~G 236 (795)
T 1w7j_A 235 IG 236 (795)
T ss_dssp EE
T ss_pred ee
Confidence 76
No 4
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=99.93 E-value=6.8e-27 Score=189.35 Aligned_cols=80 Identities=30% Similarity=0.343 Sum_probs=67.6
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccCc---cchhhHHHHHHHH--HHHHhcCccccCCCCCCCccceEEEEeCCC
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRDT---KFFDMFSTVIVSA--WFQAFGNAKTAHNNNSSRFGKFIQVNYKEN 75 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~~---~~~~~l~~~i~~s--ileafGnAkT~~n~nSSrfGk~~~l~f~~~ 75 (80)
|.|||||||||++|+||+||+..+........ ....+++++|+++ ||||||||||.+||||||||||++|+|+.+
T Consensus 176 iSGESGAGKTe~tK~im~yla~v~~~~~~~~~~~~~~~~~ve~~il~snpiLEAFGNAkT~rNdNSSRFGK~i~i~F~~~ 255 (783)
T 4db1_A 176 ITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSPGKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGAT 255 (783)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHHSBCCCC-------CCSCHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEEEEECTT
T ss_pred EeCCCCCCCchHHHHHHHhhhhhccCCCccccccccccccHHHHHHHhHHHHHhccCcccCCCCCCCccceeEEEEECCC
Confidence 47999999999999999999987653211110 1125799999999 999999999999999999999999999999
Q ss_pred CeecC
Q psy17057 76 GMVHG 80 (80)
Q Consensus 76 g~l~G 80 (80)
|+|+|
T Consensus 256 g~i~G 260 (783)
T 4db1_A 256 GKLAS 260 (783)
T ss_dssp SBEEE
T ss_pred CCEee
Confidence 99876
No 5
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=99.93 E-value=9.3e-27 Score=188.36 Aligned_cols=77 Identities=35% Similarity=0.479 Sum_probs=67.0
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccCccchhhHHHHHHHH--HHHHhcCccccCCCCCCCccceEEEEeCCCCee
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRDTKFFDMFSTVIVSA--WFQAFGNAKTAHNNNSSRFGKFIQVNYKENGMV 78 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~~~~~~~l~~~i~~s--ileafGnAkT~~n~nSSrfGk~~~l~f~~~g~l 78 (80)
|.|||||||||++|+||+||+..+.+... +....++++|+++ ||||||||||.+|+||||||||++|+|+.+|+|
T Consensus 177 isGESGAGKTe~tK~i~~yla~~~~~~~~---~~~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i 253 (770)
T 1w9i_A 177 ITGESGAGKTENTKKVIQYLASVAGRNQA---NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFI 253 (770)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHHHCC---------CHHHHHHHHHHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSCE
T ss_pred EecCCCCcchHHHHHHHHHHHHhccccCC---cccCcHHHHHHHHHHHHHHhCCCcCCCCCCcCCcceEEEEEECCCCCE
Confidence 47999999999999999999998764321 1136799999999 999999999999999999999999999999998
Q ss_pred cC
Q psy17057 79 HG 80 (80)
Q Consensus 79 ~G 80 (80)
+|
T Consensus 254 ~G 255 (770)
T 1w9i_A 254 SG 255 (770)
T ss_dssp EE
T ss_pred ee
Confidence 76
No 6
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=99.93 E-value=5.9e-27 Score=189.54 Aligned_cols=72 Identities=40% Similarity=0.510 Sum_probs=62.2
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccCccchhhHHHHHHHH--HHHHhcCccccCCCCCCCccceEEEEeCCCCee
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRDTKFFDMFSTVIVSA--WFQAFGNAKTAHNNNSSRFGKFIQVNYKENGMV 78 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~~~~~~~l~~~i~~s--ileafGnAkT~~n~nSSrfGk~~~l~f~~~g~l 78 (80)
|.|||||||||++|+||+||+..+.. ...++++|+++ ||||||||||.+||||||||||++|+|+.+|+|
T Consensus 145 iSGESGAGKTe~tK~i~~yla~~~~~--------~~~ie~~il~snpiLEAFGNAKT~rNdNSSRFGKfi~i~F~~~g~i 216 (784)
T 2v26_A 145 VSGESGAGKTENTKFVLRYLTESYGT--------GQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSV 216 (784)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHHHC--------------CHHHHTHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSCE
T ss_pred EcCCCCCCceehHHHHHHHHHhhcCC--------CCcHHHHHHHHHHHHHHhCCCcCCCCCCcchhheEEEEEEecCCcE
Confidence 47999999999999999999976432 14699999999 999999999999999999999999999999998
Q ss_pred cC
Q psy17057 79 HG 80 (80)
Q Consensus 79 ~G 80 (80)
+|
T Consensus 217 ~G 218 (784)
T 2v26_A 217 VG 218 (784)
T ss_dssp EE
T ss_pred ee
Confidence 76
No 7
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.93 E-value=2.3e-26 Score=189.65 Aligned_cols=77 Identities=34% Similarity=0.462 Sum_probs=68.4
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccCccchhhHHHHHHHH--HHHHhcCccccCCCCCCCccceEEEEeCCCCee
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRDTKFFDMFSTVIVSA--WFQAFGNAKTAHNNNSSRFGKFIQVNYKENGMV 78 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~~~~~~~l~~~i~~s--ileafGnAkT~~n~nSSrfGk~~~l~f~~~g~l 78 (80)
|.|||||||||++|+||+||+..+.+...+ ....++++|+++ ||||||||||.+||||||||||++|+|+.+|.|
T Consensus 177 isGESGAGKTe~~K~i~~yla~~~~~~~~~---~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i 253 (1010)
T 1g8x_A 177 ITGESGAGKTENTKKVIQYLASVAGRNQAN---GSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFI 253 (1010)
T ss_dssp EEESTTSSHHHHHHHHHHHHHHHHCCCCTT---TSSHHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSCE
T ss_pred EeCCCCCCcchHHHHHHHHHHHhcccCCCc---ccchHHHHHHHHHHHHHHhCCCcCCCCCCccccceEEEEEECCCCCC
Confidence 479999999999999999999987653211 126899999999 999999999999999999999999999999998
Q ss_pred cC
Q psy17057 79 HG 80 (80)
Q Consensus 79 ~G 80 (80)
+|
T Consensus 254 ~G 255 (1010)
T 1g8x_A 254 SG 255 (1010)
T ss_dssp EE
T ss_pred cc
Confidence 76
No 8
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=99.92 E-value=1.3e-26 Score=192.05 Aligned_cols=72 Identities=40% Similarity=0.514 Sum_probs=64.8
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccCccchhhHHHHHHHH--HHHHhcCccccCCCCCCCccceEEEEeCCCCee
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRDTKFFDMFSTVIVSA--WFQAFGNAKTAHNNNSSRFGKFIQVNYKENGMV 78 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~~~~~~~l~~~i~~s--ileafGnAkT~~n~nSSrfGk~~~l~f~~~g~l 78 (80)
|.|||||||||++|+||+||+..+... ..++++|+++ ||||||||+|.+|+||||||||++|+|+..|+|
T Consensus 149 iSGESGAGKTestK~im~yLa~~~~~~--------~~ie~~Il~snpiLEAFGNAKT~rNdNSSRFGK~iel~F~~~G~i 220 (1052)
T 4anj_A 149 VSGESGAGKTENTKFVLRYLTESYGTG--------QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSV 220 (1052)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHHHCC-----------CTTHHHHTHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSCE
T ss_pred EecCCCCCHHHHHHHHHHHHHHhcCCC--------ccHHHHHHHHHHHHHhccCCCCCCCCCcCCceeEEEEEECCCCCE
Confidence 479999999999999999999876532 4589999999 999999999999999999999999999999999
Q ss_pred cC
Q psy17057 79 HG 80 (80)
Q Consensus 79 ~G 80 (80)
+|
T Consensus 221 ~G 222 (1052)
T 4anj_A 221 VG 222 (1052)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 9
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.92 E-value=2e-26 Score=190.86 Aligned_cols=80 Identities=34% Similarity=0.503 Sum_probs=68.4
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccC-ccc-------hhhHHHHHHHH--HHHHhcCccccCCCCCCCccceEEE
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRD-TKF-------FDMFSTVIVSA--WFQAFGNAKTAHNNNSSRFGKFIQV 70 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~-~~~-------~~~l~~~i~~s--ileafGnAkT~~n~nSSrfGk~~~l 70 (80)
|.|||||||||++|+||+||+..+.+...+. +.. ...|+++|+++ ||||||||||.+||||||||||++|
T Consensus 174 isGeSGaGKTe~~k~~~~yla~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~npileaFGnAkT~rN~NSSRfgk~~~i 253 (1184)
T 1i84_S 174 CTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRI 253 (1184)
T ss_dssp CCCSTTSSTTHHHHHHHHHHHHHSSCCSCC------CTTCCCCCSHHHHHHHHHHHHTTTTEEEETTEEEEECSCEEEEE
T ss_pred EecCCCCCccHHHHHHHHHHHHHhcCCCcccccccccccccccchHHHHHHHHHHHHHHhcCCcCCCCccccccceeEEE
Confidence 6899999999999999999999876522111 000 26899999999 9999999999999999999999999
Q ss_pred EeCCCCeecC
Q psy17057 71 NYKENGMVHG 80 (80)
Q Consensus 71 ~f~~~g~l~G 80 (80)
+|+.+|.|+|
T Consensus 254 ~f~~~g~i~g 263 (1184)
T 1i84_S 254 NFDVTGYIVG 263 (1184)
T ss_dssp EECSSSCEEE
T ss_pred EECCCCCEee
Confidence 9999999976
No 10
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.92 E-value=1.9e-26 Score=190.96 Aligned_cols=74 Identities=24% Similarity=0.346 Sum_probs=67.2
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccCccchhhHHHHHHHH--HHHHhcCccccCCCCCCCccceEEEEeCCCCee
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRDTKFFDMFSTVIVSA--WFQAFGNAKTAHNNNSSRFGKFIQVNYKENGMV 78 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~~~~~~~l~~~i~~s--ileafGnAkT~~n~nSSrfGk~~~l~f~~~g~l 78 (80)
|.|||||||||++|++|+||+..+.+.. ...++++|+++ ||||||||||.+||||||||||++|+|+.+|.|
T Consensus 161 isGESGAGKTe~~K~i~~yla~~~~~~~------~~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i 234 (1080)
T 2dfs_A 161 VSGESGAGKTVSAKYAMRYFATVSGSAS------EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRI 234 (1080)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHTTTCCT------TTCTHHHHHHHHHHHHHHHEEEETTEEEEECSEEEEEEEECTTCCE
T ss_pred EcCCCCCCccchHHHHHHHHHhhccCCC------ccchHHHHHHHHHHHHHhcCCcCCCCCCccccceeEEEEECCCCCE
Confidence 4799999999999999999998865421 15799999999 999999999999999999999999999999999
Q ss_pred cC
Q psy17057 79 HG 80 (80)
Q Consensus 79 ~G 80 (80)
+|
T Consensus 235 ~G 236 (1080)
T 2dfs_A 235 IG 236 (1080)
T ss_dssp EE
T ss_pred ee
Confidence 76
No 11
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.92 E-value=1.4e-26 Score=190.62 Aligned_cols=80 Identities=35% Similarity=0.491 Sum_probs=67.7
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCccc-CccchhhHHHHHHHH--HHHHhcCccccCCCCCCCccceEEEEeCCCCe
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNR-DTKFFDMFSTVIVSA--WFQAFGNAKTAHNNNSSRFGKFIQVNYKENGM 77 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~-~~~~~~~l~~~i~~s--ileafGnAkT~~n~nSSrfGk~~~l~f~~~g~ 77 (80)
|.|||||||||++|+||+||+..+.+...+ ++.....++++|+++ ||||||||||.+||||||||||++|+|+.+|.
T Consensus 151 isGESGAGKTe~~K~i~~yla~~~~~~~~~~~~~~~~~ie~~il~~npiLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~ 230 (995)
T 2ycu_A 151 CTGESGAGKTENTKKVIQYLAHVASSPKGRKEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGY 230 (995)
T ss_dssp EECBTTSSHHHHHHHHHHHHHHHSCCSSSCSSSCCCC-CCSTTTSHHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSC
T ss_pred ecCCCCCCchhhHHHHHHHHHHhcccCCccccccccccHHHHHHHHHHHHHHhcCccCCCCCCCCccceEEEEEECCCCC
Confidence 479999999999999999999987653211 111125789999999 99999999999999999999999999999999
Q ss_pred ecC
Q psy17057 78 VHG 80 (80)
Q Consensus 78 l~G 80 (80)
|+|
T Consensus 231 i~G 233 (995)
T 2ycu_A 231 IVG 233 (995)
T ss_dssp EEE
T ss_pred Eee
Confidence 876
No 12
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=91.97 E-value=0.056 Score=35.05 Aligned_cols=20 Identities=10% Similarity=0.101 Sum_probs=17.4
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|+||+|||-+.+.++..+
T Consensus 10 i~GpsGsGKSTL~~~L~~~~ 29 (180)
T 1kgd_A 10 LLGAHGVGRRHIKNTLITKH 29 (180)
T ss_dssp EECCTTSSHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHhhC
Confidence 46999999999999988764
No 13
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=91.93 E-value=0.067 Score=35.37 Aligned_cols=21 Identities=14% Similarity=0.186 Sum_probs=18.5
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
|.|+||||||-+.+.+...+-
T Consensus 27 I~G~sGsGKSTl~~~l~~~~~ 47 (208)
T 3c8u_A 27 LSGAPGSGKSTLSNPLAAALS 47 (208)
T ss_dssp EECCTTSCTHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHh
Confidence 479999999999999988764
No 14
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=90.97 E-value=0.098 Score=37.28 Aligned_cols=22 Identities=14% Similarity=0.176 Sum_probs=19.5
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|+|.||+|||-+.+.+...|-.
T Consensus 36 I~G~sGsGKSTla~~L~~~l~~ 57 (290)
T 1odf_A 36 FSGPQGSGKSFTSIQIYNHLME 57 (290)
T ss_dssp EECCTTSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhhh
Confidence 5899999999999999888754
No 15
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=90.62 E-value=0.12 Score=34.22 Aligned_cols=20 Identities=10% Similarity=0.130 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+-|+||||||-+.++++..+
T Consensus 9 lvGpsGaGKSTLl~~L~~~~ 28 (198)
T 1lvg_A 9 LSGPSGAGKSTLLKKLFQEH 28 (198)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHhhC
Confidence 35999999999999998865
No 16
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=90.01 E-value=0.075 Score=35.19 Aligned_cols=23 Identities=17% Similarity=0.281 Sum_probs=19.7
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
|.|+||+|||-+.++++.++-..
T Consensus 7 IvG~SGsGKSTL~~~L~~~~~~~ 29 (171)
T 2f1r_A 7 IVGTSDSGKTTLITRMMPILRER 29 (171)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHhhhc
Confidence 46999999999999999987543
No 17
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=89.74 E-value=0.13 Score=33.42 Aligned_cols=20 Identities=10% Similarity=0.170 Sum_probs=17.2
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|||||-+.++++..+
T Consensus 6 l~GpsGaGKsTl~~~L~~~~ 25 (186)
T 3a00_A 6 ISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp EESSSSSSHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHhhC
Confidence 36999999999999988754
No 18
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=89.64 E-value=0.12 Score=33.87 Aligned_cols=20 Identities=20% Similarity=0.150 Sum_probs=17.5
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.||+|||...+.+...+
T Consensus 17 l~G~sGsGKsTl~~~L~~~~ 36 (204)
T 2qor_A 17 VCGPSGVGKGTLIKKVLSEF 36 (204)
T ss_dssp EECCTTSCHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHHhC
Confidence 46999999999999988766
No 19
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=89.60 E-value=0.19 Score=32.51 Aligned_cols=22 Identities=27% Similarity=0.291 Sum_probs=18.5
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|++|+|||-..+.++..+..
T Consensus 28 i~G~~GsGKTtl~~~l~~~~~~ 49 (235)
T 2w0m_A 28 LTGEPGTGKTIFSLHFIAKGLR 49 (235)
T ss_dssp EECSTTSSHHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHHH
Confidence 4699999999999998876654
No 20
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=89.56 E-value=0.14 Score=33.42 Aligned_cols=20 Identities=30% Similarity=0.366 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-..+++...+
T Consensus 11 i~G~~GsGKSTl~~~l~~~~ 30 (211)
T 3asz_A 11 IAGGTASGKTTLAQALARTL 30 (211)
T ss_dssp EEESTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 46999999999999998865
No 21
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=89.51 E-value=0.17 Score=31.21 Aligned_cols=22 Identities=14% Similarity=0.101 Sum_probs=18.8
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|++|.|||.+.+.+.+.+..
T Consensus 48 l~G~~G~GKT~l~~~~~~~~~~ 69 (195)
T 1jbk_A 48 LIGEPGVGKTAIVEGLAQRIIN 69 (195)
T ss_dssp EECCTTSCHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHh
Confidence 3599999999999999888754
No 22
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=89.29 E-value=0.14 Score=32.95 Aligned_cols=20 Identities=15% Similarity=0.200 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|||||-+.+++...+
T Consensus 12 l~Gp~GsGKSTl~~~L~~~~ 31 (205)
T 3tr0_A 12 ISAPSGAGKTSLVRALVKAL 31 (205)
T ss_dssp EECCTTSCHHHHHHHHHHHS
T ss_pred EECcCCCCHHHHHHHHHhhC
Confidence 35999999999999987754
No 23
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=89.09 E-value=0.19 Score=32.90 Aligned_cols=21 Identities=14% Similarity=0.199 Sum_probs=18.1
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+-|.+|+|||-+.+.+...|-
T Consensus 30 l~G~sGsGKSTl~~~La~~l~ 50 (200)
T 3uie_A 30 VTGLSGSGKSTLACALNQMLY 50 (200)
T ss_dssp EECSTTSSHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHH
Confidence 359999999999999988763
No 24
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=88.89 E-value=0.18 Score=35.21 Aligned_cols=22 Identities=14% Similarity=0.104 Sum_probs=18.9
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|+||||||-+-+.++.++-.
T Consensus 30 i~Gp~GsGKSTll~~l~g~~~~ 51 (261)
T 2eyu_A 30 VTGPTGSGKSTTIASMIDYINQ 51 (261)
T ss_dssp EECSTTCSHHHHHHHHHHHHHH
T ss_pred EECCCCccHHHHHHHHHHhCCC
Confidence 4699999999999999987643
No 25
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=88.39 E-value=0.22 Score=32.63 Aligned_cols=20 Identities=15% Similarity=0.132 Sum_probs=17.2
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|+|||-..+++...+
T Consensus 10 i~G~~GsGKSTl~~~L~~~~ 29 (227)
T 1cke_A 10 IDGPSGAGKGTLCKAMAEAL 29 (227)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 36999999999999998754
No 26
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=88.23 E-value=0.21 Score=35.86 Aligned_cols=21 Identities=29% Similarity=0.275 Sum_probs=18.2
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
|+|.+|||||-+.+++...+-
T Consensus 95 I~G~sGsGKSTL~~~L~gll~ 115 (312)
T 3aez_A 95 VAGSVAVGKSTTARVLQALLA 115 (312)
T ss_dssp EECCTTSCHHHHHHHHHHHHH
T ss_pred EECCCCchHHHHHHHHHhhcc
Confidence 579999999999999887663
No 27
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=88.23 E-value=0.14 Score=32.96 Aligned_cols=20 Identities=10% Similarity=0.086 Sum_probs=17.4
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-..+++...+
T Consensus 11 l~G~~GsGKSTl~~~L~~~~ 30 (207)
T 2j41_A 11 LSGPSGVGKGTVRKRIFEDP 30 (207)
T ss_dssp EECSTTSCHHHHHHHHHHCT
T ss_pred EECCCCCCHHHHHHHHHHhh
Confidence 36999999999999988765
No 28
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=88.12 E-value=0.19 Score=33.76 Aligned_cols=20 Identities=15% Similarity=0.124 Sum_probs=17.4
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+-|+||||||-+.++++..+
T Consensus 28 lvGpsGsGKSTLl~~L~g~~ 47 (218)
T 1z6g_A 28 ICGPSGVGKGTLIKKLLNEF 47 (218)
T ss_dssp EECSTTSSHHHHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHHhhC
Confidence 35999999999999998865
No 29
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=88.11 E-value=0.24 Score=31.84 Aligned_cols=20 Identities=20% Similarity=0.262 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|+|||...+.+...|
T Consensus 7 i~G~~GsGKst~~~~la~~l 26 (208)
T 3ake_A 7 IDGPSASGKSSVARRVAAAL 26 (208)
T ss_dssp EECSTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHhc
Confidence 47999999999999887654
No 30
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=87.94 E-value=0.15 Score=33.78 Aligned_cols=19 Identities=16% Similarity=0.083 Sum_probs=16.7
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|+||+|||.+.+.++..+
T Consensus 14 ~GpsGsGKsTl~~~L~~~~ 32 (208)
T 3tau_A 14 SGPSGVGKGTVREAVFKDP 32 (208)
T ss_dssp ECCTTSCHHHHHHHHHHST
T ss_pred ECcCCCCHHHHHHHHHhhC
Confidence 5999999999999887754
No 31
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=87.76 E-value=0.23 Score=30.78 Aligned_cols=22 Identities=14% Similarity=0.155 Sum_probs=18.6
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|++|.|||.+.+.+.+.+..
T Consensus 48 l~G~~G~GKT~la~~~~~~~~~ 69 (187)
T 2p65_A 48 LLGDPGVGKTAIVEGLAIKIVQ 69 (187)
T ss_dssp EESCGGGCHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHh
Confidence 3599999999999999887744
No 32
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=87.51 E-value=0.22 Score=34.08 Aligned_cols=20 Identities=15% Similarity=0.102 Sum_probs=16.8
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|||||.+.+++.+.|
T Consensus 32 I~G~~GsGKSTl~k~La~~L 51 (252)
T 4e22_A 32 VDGPSGAGKGTLCKALAESL 51 (252)
T ss_dssp EECCTTSSHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHhc
Confidence 46999999999999998543
No 33
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=87.44 E-value=0.23 Score=32.64 Aligned_cols=20 Identities=20% Similarity=0.192 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-+.+.+...+
T Consensus 27 i~G~~GsGKstl~~~l~~~~ 46 (201)
T 1rz3_A 27 IDGLSRSGKTTLANQLSQTL 46 (201)
T ss_dssp EEECTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHH
Confidence 46999999999999988766
No 34
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=87.29 E-value=0.27 Score=33.20 Aligned_cols=20 Identities=20% Similarity=0.300 Sum_probs=17.4
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|++|||||-..+++...+
T Consensus 30 I~G~~GsGKSTl~k~L~~~l 49 (245)
T 2jeo_A 30 VSGGTASGKSTVCEKIMELL 49 (245)
T ss_dssp EECSTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 46999999999999987755
No 35
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=87.24 E-value=0.24 Score=33.34 Aligned_cols=19 Identities=11% Similarity=0.179 Sum_probs=15.9
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.|+||+||+.+.+.++..
T Consensus 6 i~GPSG~GK~Tl~~~L~~~ 24 (186)
T 1ex7_A 6 ISGPSGTGKSTLLKKLFAE 24 (186)
T ss_dssp EECCTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHh
Confidence 4699999999998877654
No 36
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=87.21 E-value=0.31 Score=32.06 Aligned_cols=19 Identities=11% Similarity=0.100 Sum_probs=16.8
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|||||-+.+.+...+
T Consensus 26 ~GpnGsGKSTLl~~l~gl~ 44 (207)
T 1znw_A 26 SGPSAVGKSTVVRCLRERI 44 (207)
T ss_dssp ECSTTSSHHHHHHHHHHHS
T ss_pred ECCCCCCHHHHHHHHHhhC
Confidence 5999999999999998765
No 37
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=87.18 E-value=0.29 Score=33.50 Aligned_cols=20 Identities=25% Similarity=0.218 Sum_probs=17.8
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.|++|.|||.+++.+...+.
T Consensus 53 ~G~~GtGKt~la~~la~~~~ 72 (311)
T 4fcw_A 53 LGPTGVGKTELAKTLAATLF 72 (311)
T ss_dssp ESCSSSSHHHHHHHHHHHHH
T ss_pred ECCCCcCHHHHHHHHHHHHc
Confidence 59999999999999988763
No 38
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=87.11 E-value=0.29 Score=31.91 Aligned_cols=20 Identities=20% Similarity=0.122 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+...|
T Consensus 30 l~G~~GsGKsTl~~~La~~l 49 (199)
T 3vaa_A 30 LTGYMGAGKTTLGKAFARKL 49 (199)
T ss_dssp EECCTTSCHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHc
Confidence 35999999999999998765
No 39
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=87.07 E-value=0.3 Score=30.79 Aligned_cols=21 Identities=14% Similarity=0.022 Sum_probs=17.7
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|.+|+|||-..+.+..+|-
T Consensus 8 i~G~~GsGKsT~~~~L~~~l~ 28 (192)
T 1kht_A 8 VTGVPGVGSTTSSQLAMDNLR 28 (192)
T ss_dssp EECCTTSCHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHH
Confidence 469999999999999887653
No 40
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=87.01 E-value=0.37 Score=30.67 Aligned_cols=20 Identities=25% Similarity=0.277 Sum_probs=17.9
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
-|++|+|||-+.+.+...+.
T Consensus 44 ~G~~G~GKTtL~~~i~~~~~ 63 (180)
T 3ec2_A 44 VGSPGVGKTHLAVATLKAIY 63 (180)
T ss_dssp CCSSSSSHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHH
Confidence 59999999999999988775
No 41
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=86.99 E-value=0.29 Score=33.21 Aligned_cols=20 Identities=25% Similarity=0.140 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|.|||.+++.+.+.+
T Consensus 55 l~G~~GtGKT~la~~la~~l 74 (310)
T 1ofh_A 55 MIGPTGVGKTEIARRLAKLA 74 (310)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35999999999999998876
No 42
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=86.78 E-value=0.25 Score=31.09 Aligned_cols=20 Identities=20% Similarity=0.248 Sum_probs=16.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-+.+.+...|
T Consensus 8 l~G~~GsGKST~a~~La~~l 27 (178)
T 1qhx_A 8 LNGGSSAGKSGIVRCLQSVL 27 (178)
T ss_dssp EECCTTSSHHHHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHHHhc
Confidence 36999999999999987754
No 43
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=86.69 E-value=0.32 Score=31.54 Aligned_cols=20 Identities=10% Similarity=0.061 Sum_probs=17.4
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|||||-..+.+...+
T Consensus 23 l~G~~GsGKSTla~~L~~~l 42 (202)
T 3t61_A 23 VMGVSGSGKSSVGEAIAEAC 42 (202)
T ss_dssp EECSTTSCHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 46999999999999987765
No 44
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=86.68 E-value=0.32 Score=31.94 Aligned_cols=21 Identities=24% Similarity=0.233 Sum_probs=17.2
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|++|||||-..+.++...+
T Consensus 35 l~GpnGsGKSTLl~~i~~~~~ 55 (251)
T 2ehv_A 35 LTGGTGTGKTTFAAQFIYKGA 55 (251)
T ss_dssp EECCTTSSHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHH
Confidence 469999999999998875444
No 45
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=86.65 E-value=0.33 Score=30.83 Aligned_cols=20 Identities=15% Similarity=0.042 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-+.+.+.+.|
T Consensus 10 l~G~~GsGKst~a~~La~~l 29 (185)
T 3trf_A 10 LIGLMGAGKTSVGSQLAKLT 29 (185)
T ss_dssp EECSTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35999999999999987765
No 46
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=86.63 E-value=0.32 Score=31.36 Aligned_cols=22 Identities=23% Similarity=0.078 Sum_probs=18.3
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+-|++|+|||-+.+.+...+..
T Consensus 59 l~G~~GtGKT~la~~i~~~~~~ 80 (202)
T 2w58_A 59 LHGSFGVGKTYLLAAIANELAK 80 (202)
T ss_dssp EECSTTSSHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 3599999999999988877643
No 47
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=86.52 E-value=0.24 Score=32.15 Aligned_cols=20 Identities=15% Similarity=0.190 Sum_probs=16.7
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|+|||-..+.++..+
T Consensus 30 l~G~nGsGKSTll~~l~g~~ 49 (231)
T 4a74_A 30 VFGEFGSGKTQLAHTLAVMV 49 (231)
T ss_dssp EEESTTSSHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHH
Confidence 46999999999999887643
No 48
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=86.47 E-value=0.35 Score=29.93 Aligned_cols=20 Identities=15% Similarity=0.061 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+...|
T Consensus 6 l~G~~GsGKsT~~~~L~~~l 25 (173)
T 3kb2_A 6 LEGPDCCFKSTVAAKLSKEL 25 (173)
T ss_dssp EECSSSSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 46999999999999887664
No 49
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=86.39 E-value=0.34 Score=30.70 Aligned_cols=20 Identities=15% Similarity=0.074 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|+|||-+.+.+...|
T Consensus 9 i~G~~GsGKsTla~~La~~l 28 (175)
T 1via_A 9 FIGFMGSGKSTLARALAKDL 28 (175)
T ss_dssp EECCTTSCHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHc
Confidence 36999999999999887754
No 50
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=86.25 E-value=0.32 Score=35.69 Aligned_cols=23 Identities=22% Similarity=0.148 Sum_probs=19.5
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
+.|+||||||-+-+.++.++-..
T Consensus 128 I~GptGSGKTTlL~~l~g~~~~~ 150 (356)
T 3jvv_A 128 VTGPTGSGKSTTLAAMLDYLNNT 150 (356)
T ss_dssp EECSTTSCHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHhcccCC
Confidence 46999999999999998887543
No 51
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=86.22 E-value=0.28 Score=30.02 Aligned_cols=18 Identities=17% Similarity=0.244 Sum_probs=15.3
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.|.+|||||-.++.+ ..
T Consensus 6 l~G~~GsGKsT~a~~L-~~ 23 (179)
T 3lw7_A 6 ITGMPGSGKSEFAKLL-KE 23 (179)
T ss_dssp EECCTTSCHHHHHHHH-HH
T ss_pred EECCCCCCHHHHHHHH-HH
Confidence 4699999999999988 53
No 52
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=86.19 E-value=0.36 Score=30.41 Aligned_cols=21 Identities=19% Similarity=0.224 Sum_probs=18.0
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|++|.|||.+.+.+.+.+.
T Consensus 43 l~G~~G~GKT~l~~~l~~~~~ 63 (226)
T 2chg_A 43 FSGPPGTGKTATAIALARDLF 63 (226)
T ss_dssp EECSTTSSHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHh
Confidence 359999999999999988763
No 53
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=86.15 E-value=0.36 Score=30.69 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|+|||.+++.+.+.|
T Consensus 7 l~G~~GsGKsT~a~~La~~l 26 (184)
T 2iyv_A 7 LVGLPGSGKSTIGRRLAKAL 26 (184)
T ss_dssp EECSTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHc
Confidence 46999999999999887754
No 54
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=86.13 E-value=0.36 Score=30.41 Aligned_cols=20 Identities=20% Similarity=0.154 Sum_probs=16.8
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-..+.+...+
T Consensus 13 l~G~~GsGKSTl~~~l~~~~ 32 (175)
T 1knq_A 13 LMGVSGSGKSAVASEVAHQL 32 (175)
T ss_dssp EECSTTSCHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHhh
Confidence 35999999999999887654
No 55
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=86.12 E-value=0.34 Score=35.52 Aligned_cols=22 Identities=14% Similarity=0.104 Sum_probs=19.1
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|+||||||-+-+.++.++-.
T Consensus 141 ivG~~GsGKTTll~~l~~~~~~ 162 (372)
T 2ewv_A 141 VTGPTGSGKSTTIASMIDYINQ 162 (372)
T ss_dssp EECSSSSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHhhcCc
Confidence 4699999999999999998754
No 56
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=85.90 E-value=0.37 Score=31.12 Aligned_cols=22 Identities=9% Similarity=-0.020 Sum_probs=18.5
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|++|+|||.+.+.+...+..
T Consensus 57 l~G~~G~GKT~la~~l~~~~~~ 78 (242)
T 3bos_A 57 LWGPVKSGRTHLIHAACARANE 78 (242)
T ss_dssp EECSTTSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 3599999999999999887653
No 57
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=85.81 E-value=0.3 Score=31.55 Aligned_cols=18 Identities=28% Similarity=0.246 Sum_probs=15.8
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|++|+|||-..+.++.
T Consensus 25 i~G~~GsGKTtl~~~l~~ 42 (220)
T 2cvh_A 25 VYGPYASGKTTLALQTGL 42 (220)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 479999999999998876
No 58
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=85.75 E-value=0.36 Score=34.82 Aligned_cols=22 Identities=14% Similarity=-0.005 Sum_probs=18.4
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|.|.||+|||.+.+.++..+..
T Consensus 40 i~G~~G~GKs~~~~~~~~~~~~ 61 (392)
T 4ag6_A 40 ILAKPGAGKSFTAKMLLLREYM 61 (392)
T ss_dssp EECCTTSSHHHHHHHHHHHHHT
T ss_pred EEcCCCCCHHHHHHHHHHHHHH
Confidence 4699999999999998876643
No 59
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=85.75 E-value=0.39 Score=29.96 Aligned_cols=20 Identities=20% Similarity=0.084 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||...+.+...|
T Consensus 7 l~G~~GsGKsT~a~~La~~l 26 (173)
T 1e6c_A 7 MVGARGCGMTTVGRELARAL 26 (173)
T ss_dssp EESCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 36999999999999887754
No 60
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=85.68 E-value=0.33 Score=31.82 Aligned_cols=22 Identities=27% Similarity=0.243 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
++|++|+|||.....++..++.
T Consensus 28 i~G~~GsGKTtl~~~~~~~~~~ 49 (247)
T 2dr3_A 28 LSGGPGTGKTIFSQQFLWNGLK 49 (247)
T ss_dssp EEECTTSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHh
Confidence 4799999999997776665543
No 61
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=85.55 E-value=0.57 Score=31.52 Aligned_cols=20 Identities=20% Similarity=0.071 Sum_probs=17.4
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+-|++|.|||-+++.+...+
T Consensus 49 l~G~~GtGKT~la~~la~~~ 68 (268)
T 2r62_A 49 LVGPPGTGKTLLAKAVAGEA 68 (268)
T ss_dssp CBCSSCSSHHHHHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHHHHh
Confidence 46999999999999987765
No 62
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, S genomics; 1.60A {Homo sapiens}
Probab=85.54 E-value=0.26 Score=31.61 Aligned_cols=22 Identities=18% Similarity=0.021 Sum_probs=17.9
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
.++||+|||.+..+++..++..
T Consensus 54 ~~~tGsGKT~~~~~~~~~~~~~ 75 (216)
T 3b6e_A 54 CLPTGSGKTRVAVYIAKDHLDK 75 (216)
T ss_dssp ECSCHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHHHhh
Confidence 5799999999998888766543
No 63
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=85.54 E-value=0.39 Score=31.29 Aligned_cols=20 Identities=20% Similarity=0.013 Sum_probs=17.2
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-..+.+...+
T Consensus 34 l~G~~GsGKSTl~~~L~~~~ 53 (200)
T 4eun_A 34 VMGVSGSGKTTIAHGVADET 53 (200)
T ss_dssp EECCTTSCHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHhh
Confidence 35999999999999987755
No 64
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=85.46 E-value=0.38 Score=33.04 Aligned_cols=20 Identities=20% Similarity=0.225 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|+|||-.++.+...+
T Consensus 6 I~G~~GSGKSTla~~La~~~ 25 (253)
T 2ze6_A 6 IYGPTCSGKTDMAIQIAQET 25 (253)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCcCHHHHHHHHHhcC
Confidence 47999999999999887765
No 65
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=85.44 E-value=0.29 Score=31.30 Aligned_cols=18 Identities=11% Similarity=0.169 Sum_probs=15.6
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
|.|.+|||||.+.+++.+
T Consensus 13 i~G~~GsGKST~~~~La~ 30 (203)
T 1uf9_A 13 ITGNIGSGKSTVAALLRS 30 (203)
T ss_dssp EEECTTSCHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 469999999999998765
No 66
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=85.38 E-value=0.4 Score=31.96 Aligned_cols=23 Identities=17% Similarity=0.145 Sum_probs=19.5
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
++|.+|+|||-....++.+|...
T Consensus 9 i~G~sGsGKTTl~~~L~~~l~~~ 31 (169)
T 1xjc_A 9 VVGYKHSGKTTLMEKWVAAAVRE 31 (169)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHhhHhc
Confidence 47999999999999998887543
No 67
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=85.25 E-value=0.42 Score=30.32 Aligned_cols=20 Identities=15% Similarity=0.062 Sum_probs=17.1
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+...|
T Consensus 16 i~G~~GsGKst~~~~l~~~~ 35 (180)
T 3iij_A 16 LTGTPGVGKTTLGKELASKS 35 (180)
T ss_dssp EECSTTSSHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHh
Confidence 46999999999999887765
No 68
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=85.14 E-value=0.32 Score=33.12 Aligned_cols=20 Identities=15% Similarity=0.159 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|+||+|||.+.+.++..+
T Consensus 24 l~GPSGaGKsTL~~~L~~~~ 43 (197)
T 3ney_A 24 LIGASGVGRSHIKNALLSQN 43 (197)
T ss_dssp EECCTTSSHHHHHHHHHHHC
T ss_pred EECcCCCCHHHHHHHHHhhC
Confidence 36999999999999988764
No 69
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=85.13 E-value=0.37 Score=31.60 Aligned_cols=19 Identities=21% Similarity=0.160 Sum_probs=16.5
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.|++|+|||-+.+.++..
T Consensus 29 i~G~~GsGKTtl~~~l~~~ 47 (243)
T 1n0w_A 29 MFGEFRTGKTQICHTLAVT 47 (243)
T ss_dssp EECCTTSSHHHHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHHHH
Confidence 4799999999999988765
No 70
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=85.12 E-value=0.37 Score=30.15 Aligned_cols=20 Identities=15% Similarity=0.132 Sum_probs=16.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+++...|
T Consensus 9 l~G~~GsGKSTl~~~La~~l 28 (173)
T 1kag_A 9 LVGPMGAGKSTIGRQLAQQL 28 (173)
T ss_dssp EECCTTSCHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35999999999999887654
No 71
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=85.08 E-value=0.42 Score=31.38 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=17.7
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+-|++|+|||-..+.+...+
T Consensus 5 l~G~nGsGKTTLl~~l~g~l 24 (178)
T 1ye8_A 5 ITGEPGVGKTTLVKKIVERL 24 (178)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35999999999999998876
No 72
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=85.07 E-value=0.42 Score=31.61 Aligned_cols=23 Identities=17% Similarity=0.082 Sum_probs=19.1
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
++|.+|+|||-..+.++..|...
T Consensus 11 i~G~sGsGKTTl~~~l~~~l~~~ 33 (174)
T 1np6_A 11 FAAWSGTGKTTLLKKLIPALCAR 33 (174)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHT
T ss_pred EEeCCCCCHHHHHHHHHHhcccc
Confidence 47999999999999988877543
No 73
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=85.04 E-value=0.33 Score=30.32 Aligned_cols=19 Identities=5% Similarity=-0.059 Sum_probs=15.9
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+-||+|.|||.+++.+-.+
T Consensus 29 l~G~~GtGKt~lA~~i~~~ 47 (145)
T 3n70_A 29 LYGAPGTGRMTGARYLHQF 47 (145)
T ss_dssp EESSTTSSHHHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHHHh
Confidence 3599999999999988554
No 74
>2ius_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA; 2.7A {Escherichia coli} PDB: 2j5p_A*
Probab=84.94 E-value=0.4 Score=37.23 Aligned_cols=22 Identities=23% Similarity=0.191 Sum_probs=18.6
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|||.||+|||++-+.++..|+.
T Consensus 172 IaG~TGSGKSt~L~~li~sLl~ 193 (512)
T 2ius_A 172 VAGTTGSGASVGVNAMILSMLY 193 (512)
T ss_dssp EECCTTSSHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 5899999999999988876653
No 75
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=84.65 E-value=0.37 Score=34.07 Aligned_cols=21 Identities=29% Similarity=0.275 Sum_probs=17.8
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
|.|.+|||||-+.+++...+-
T Consensus 85 I~G~~GsGKSTl~~~L~~~l~ 105 (308)
T 1sq5_A 85 IAGSVAVGKSTTARVLQALLS 105 (308)
T ss_dssp EEECTTSSHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHh
Confidence 479999999999998877653
No 76
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=84.63 E-value=0.42 Score=35.89 Aligned_cols=21 Identities=24% Similarity=0.112 Sum_probs=18.6
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|+||||||-+-+.++.++-
T Consensus 172 I~GpnGSGKTTlL~allg~l~ 192 (418)
T 1p9r_A 172 VTGPTGSGKSTTLYAGLQELN 192 (418)
T ss_dssp EECSTTSCHHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHhhcC
Confidence 469999999999999998774
No 77
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=84.56 E-value=0.38 Score=32.93 Aligned_cols=22 Identities=23% Similarity=0.221 Sum_probs=18.6
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|++|.|||.+++.+.+.+..
T Consensus 72 l~G~~GtGKT~la~~la~~l~~ 93 (309)
T 3syl_A 72 FTGNPGTGKTTVALKMAGLLHR 93 (309)
T ss_dssp EEECTTSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHh
Confidence 3599999999999998887744
No 78
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=84.52 E-value=0.48 Score=30.01 Aligned_cols=21 Identities=19% Similarity=0.124 Sum_probs=17.8
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|++|.|||.+.+.+.+.+.
T Consensus 50 l~G~~G~GKT~l~~~~~~~~~ 70 (250)
T 1njg_A 50 FSGTRGVGKTSIARLLAKGLN 70 (250)
T ss_dssp EECSTTSCHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhc
Confidence 359999999999999887764
No 79
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=84.48 E-value=0.2 Score=36.45 Aligned_cols=20 Identities=25% Similarity=0.301 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|+||||||-+.+.++.++
T Consensus 180 ivG~sGsGKSTll~~l~~~~ 199 (361)
T 2gza_A 180 VAGETGSGKTTLMKALMQEI 199 (361)
T ss_dssp EEESSSSCHHHHHHHHHTTS
T ss_pred EECCCCCCHHHHHHHHHhcC
Confidence 46999999999999998865
No 80
>1rif_A DAR protein, DNA helicase UVSW; bacteriophage, RECG, SF2, DNA binding protein; HET: DNA; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.23
Probab=84.40 E-value=0.56 Score=32.08 Aligned_cols=22 Identities=9% Similarity=0.090 Sum_probs=17.5
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
++++||+|||.+...++..+..
T Consensus 133 l~~~tGsGKT~~~~~~~~~~~~ 154 (282)
T 1rif_A 133 LNLPTSAGRSLIQALLARYYLE 154 (282)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHH
T ss_pred EEcCCCCCcHHHHHHHHHHHHH
Confidence 3689999999999877776554
No 81
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=84.37 E-value=0.41 Score=30.32 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=17.2
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+...|
T Consensus 10 l~G~~GsGKST~~~~L~~~l 29 (193)
T 2rhm_A 10 VTGHPATGKTTLSQALATGL 29 (193)
T ss_dssp EEESTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHc
Confidence 46899999999999887765
No 82
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=84.34 E-value=0.5 Score=29.39 Aligned_cols=20 Identities=15% Similarity=0.139 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||...+.+...|
T Consensus 5 l~G~~GsGKsT~a~~L~~~l 24 (168)
T 2pt5_A 5 LIGFMCSGKSTVGSLLSRSL 24 (168)
T ss_dssp EESCTTSCHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 46999999999999887754
No 83
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=84.22 E-value=0.41 Score=32.99 Aligned_cols=23 Identities=13% Similarity=0.005 Sum_probs=19.1
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
++|++|+|||-..+.+...+...
T Consensus 40 i~G~~G~GKTTl~~~ia~~~~~~ 62 (296)
T 1cr0_A 40 VTSGSGMGKSTFVRQQALQWGTA 62 (296)
T ss_dssp EEESTTSSHHHHHHHHHHHHHHT
T ss_pred EEeCCCCCHHHHHHHHHHHHHHH
Confidence 47999999999999988776543
No 84
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=84.21 E-value=0.38 Score=32.73 Aligned_cols=20 Identities=10% Similarity=0.114 Sum_probs=16.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|+||||||-..+.++..+
T Consensus 21 l~GpsGsGKSTLlk~L~g~~ 40 (219)
T 1s96_A 21 VSAPSGAGKSSLIQALLKTQ 40 (219)
T ss_dssp EECCTTSCHHHHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHhccC
Confidence 35999999999999887654
No 85
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=84.10 E-value=0.46 Score=34.57 Aligned_cols=21 Identities=29% Similarity=0.275 Sum_probs=17.8
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
|+|.+|||||-+.+.+...+-
T Consensus 97 I~GpsGSGKSTl~~~L~~ll~ 117 (321)
T 3tqc_A 97 IAGSVAVGKSTTSRVLKALLS 117 (321)
T ss_dssp EECCTTSSHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHhc
Confidence 579999999999998877653
No 86
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=84.09 E-value=0.44 Score=30.49 Aligned_cols=18 Identities=11% Similarity=0.010 Sum_probs=15.8
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+|||||-+.+.+..
T Consensus 7 l~G~~GaGKSTl~~~L~~ 24 (189)
T 2bdt_A 7 ITGPAGVGKSTTCKRLAA 24 (189)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHhc
Confidence 369999999999999876
No 87
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=83.84 E-value=0.38 Score=33.11 Aligned_cols=18 Identities=17% Similarity=0.316 Sum_probs=15.4
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
|.|+||+|||+++.-.++
T Consensus 21 i~G~SGaGKStlal~L~~ 38 (181)
T 3tqf_A 21 ITGEANIGKSELSLALID 38 (181)
T ss_dssp EEESSSSSHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHH
Confidence 469999999999987765
No 88
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=83.84 E-value=0.22 Score=32.49 Aligned_cols=20 Identities=25% Similarity=0.212 Sum_probs=17.1
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|+|||-..+++...+
T Consensus 26 i~G~~GsGKSTl~~~L~~~~ 45 (207)
T 2qt1_A 26 ISGVTNSGKTTLAKNLQKHL 45 (207)
T ss_dssp EEESTTSSHHHHHHHHHTTS
T ss_pred EECCCCCCHHHHHHHHHHhc
Confidence 46999999999999987754
No 89
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=83.65 E-value=0.43 Score=35.24 Aligned_cols=20 Identities=25% Similarity=0.333 Sum_probs=17.7
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|+|.||+|||..++.+...|
T Consensus 12 I~GptgSGKTtla~~La~~l 31 (340)
T 3d3q_A 12 IVGPTASGKTELSIEVAKKF 31 (340)
T ss_dssp EECSTTSSHHHHHHHHHHHT
T ss_pred EECCCcCcHHHHHHHHHHHc
Confidence 58999999999999888765
No 90
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=83.58 E-value=0.7 Score=31.01 Aligned_cols=19 Identities=16% Similarity=0.020 Sum_probs=16.6
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|+|||-+.+.+...+
T Consensus 51 ~G~~GtGKT~la~~la~~~ 69 (257)
T 1lv7_A 51 VGPPGTGKTLLAKAIAGEA 69 (257)
T ss_dssp ECCTTSCHHHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHHHHc
Confidence 5999999999999887764
No 91
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=83.53 E-value=0.59 Score=30.56 Aligned_cols=20 Identities=25% Similarity=0.265 Sum_probs=15.8
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
++|++|+|||..+..++...
T Consensus 35 i~G~pG~GKT~l~l~~~~~~ 54 (251)
T 2zts_A 35 LTGGTGTGKTTFAAQFIYKG 54 (251)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHH
Confidence 58999999999887665543
No 92
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=83.52 E-value=0.53 Score=31.63 Aligned_cols=20 Identities=10% Similarity=0.016 Sum_probs=17.2
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+-|.+|||||-..+.+.+.+
T Consensus 32 l~G~~GsGKSTl~k~La~~l 51 (246)
T 2bbw_A 32 ILGPPGSGKGTVCQRIAQNF 51 (246)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35999999999999998665
No 93
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=83.52 E-value=0.55 Score=29.82 Aligned_cols=20 Identities=15% Similarity=0.140 Sum_probs=17.7
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+.++|
T Consensus 5 i~G~~GsGKsT~~~~L~~~l 24 (205)
T 2jaq_A 5 IFGTVGAGKSTISAEISKKL 24 (205)
T ss_dssp EECCTTSCHHHHHHHHHHHH
T ss_pred EECCCccCHHHHHHHHHHhc
Confidence 46999999999999998876
No 94
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=83.21 E-value=0.36 Score=32.64 Aligned_cols=20 Identities=10% Similarity=0.029 Sum_probs=16.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+-|++|.|||.+++.+...+
T Consensus 34 l~G~~GtGKt~la~~i~~~~ 53 (265)
T 2bjv_A 34 IIGERGTGKELIASRLHYLS 53 (265)
T ss_dssp EECCTTSCHHHHHHHHHHTS
T ss_pred EECCCCCcHHHHHHHHHHhc
Confidence 35999999999999886654
No 95
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=83.18 E-value=0.59 Score=29.28 Aligned_cols=20 Identities=20% Similarity=0.174 Sum_probs=16.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|..|||||...+++...|
T Consensus 12 l~G~~GsGKSTva~~La~~l 31 (168)
T 1zuh_A 12 LIGFMGSGKSSLAQELGLAL 31 (168)
T ss_dssp EESCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35899999999999987764
No 96
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=83.10 E-value=0.45 Score=33.48 Aligned_cols=20 Identities=15% Similarity=0.243 Sum_probs=17.2
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|||||-+.+.+...+
T Consensus 38 l~G~sGsGKSTla~~L~~~~ 57 (287)
T 1gvn_B 38 LGGQPGSGKTSLRSAIFEET 57 (287)
T ss_dssp EECCTTSCTHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 47999999999999887654
No 97
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein; HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19 c.37.1.19 PDB: 2fzl_A*
Probab=83.06 E-value=0.54 Score=34.22 Aligned_cols=20 Identities=20% Similarity=0.114 Sum_probs=16.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
++++||+|||++.-.++..+
T Consensus 113 l~~~TGsGKT~~~l~~i~~~ 132 (472)
T 2fwr_A 113 IVLPTGSGKTHVAMAAINEL 132 (472)
T ss_dssp EECCTTSCHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHc
Confidence 46899999999987776654
No 98
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=83.05 E-value=0.5 Score=29.69 Aligned_cols=21 Identities=19% Similarity=0.053 Sum_probs=18.0
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|.+|+|||-..+.+.+.|-
T Consensus 6 i~G~~GsGKsT~~~~L~~~l~ 26 (194)
T 1nks_A 6 VTGIPGVGKSTVLAKVKEILD 26 (194)
T ss_dssp EEECTTSCHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHH
Confidence 368999999999999988764
No 99
>2iut_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- cell division, DNA translocation, KOPS, membrane; HET: DNA SAP; 2.25A {Pseudomonas aeruginosa} PDB: 2iuu_A*
Probab=82.90 E-value=0.54 Score=37.17 Aligned_cols=22 Identities=32% Similarity=0.295 Sum_probs=19.4
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|||-||+|||++-..++..|+.
T Consensus 219 IaG~TGSGKS~~L~tlI~sLl~ 240 (574)
T 2iut_A 219 VAGTTGSGKSVGVNAMLLSILF 240 (574)
T ss_dssp EECCTTSSHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 5899999999999998887764
No 100
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=82.82 E-value=0.49 Score=33.68 Aligned_cols=19 Identities=26% Similarity=0.204 Sum_probs=16.8
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|++|.|||.+++.+-..+
T Consensus 57 ~GppGtGKT~la~~ia~~~ 75 (363)
T 3hws_A 57 IGPTGSGKTLLAETLARLL 75 (363)
T ss_dssp ECCTTSSHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHc
Confidence 5999999999999997754
No 101
>2oca_A DAR protein, ATP-dependent DNA helicase UVSW; ATP-dependant helicase, T4-bacteriophage, recombination, hydrolase; 2.70A {Enterobacteria phage T4}
Probab=82.81 E-value=0.58 Score=34.43 Aligned_cols=22 Identities=9% Similarity=0.090 Sum_probs=17.8
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
++++||+|||++.-+++..++.
T Consensus 133 l~~~tGsGKT~~~~~~~~~~~~ 154 (510)
T 2oca_A 133 LNLPTSAGRSLIQALLARYYLE 154 (510)
T ss_dssp EECCSTTTHHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHh
Confidence 3689999999999877776554
No 102
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=82.77 E-value=0.62 Score=29.29 Aligned_cols=20 Identities=10% Similarity=-0.039 Sum_probs=16.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-.++.+...+
T Consensus 8 l~G~~GsGKsT~a~~L~~~~ 27 (196)
T 1tev_A 8 VLGGPGAGKGTQCARIVEKY 27 (196)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 46999999999999887654
No 103
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=82.73 E-value=0.71 Score=29.92 Aligned_cols=19 Identities=21% Similarity=0.132 Sum_probs=17.3
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|||||-..+.+...+
T Consensus 39 ~G~nGaGKTTLlr~l~g~l 57 (158)
T 1htw_A 39 NGDLGAGKTTLTRGMLQGI 57 (158)
T ss_dssp ECSTTSSHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHhC
Confidence 4999999999999998876
No 104
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=82.67 E-value=0.82 Score=30.31 Aligned_cols=19 Identities=21% Similarity=0.022 Sum_probs=16.6
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++.+...+
T Consensus 45 ~G~~GtGKT~la~~la~~~ 63 (262)
T 2qz4_A 45 LGPPGCGKTLLAKAVATEA 63 (262)
T ss_dssp ESCTTSSHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 5999999999999887754
No 105
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=82.64 E-value=0.53 Score=29.55 Aligned_cols=20 Identities=10% Similarity=-0.012 Sum_probs=16.8
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+...|
T Consensus 11 l~G~~GsGKsT~~~~L~~~l 30 (194)
T 1qf9_A 11 VLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp EEESTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 36899999999999887754
No 106
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=82.58 E-value=0.31 Score=31.48 Aligned_cols=21 Identities=10% Similarity=-0.026 Sum_probs=18.3
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
|.|.+|||||-..+.+..+|-
T Consensus 5 i~G~~GsGKsTl~~~L~~~l~ 25 (214)
T 1gtv_A 5 IEGVDGAGKRTLVEKLSGAFR 25 (214)
T ss_dssp EEEEEEEEHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHH
Confidence 358999999999999998874
No 107
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=82.32 E-value=0.65 Score=29.52 Aligned_cols=21 Identities=14% Similarity=0.015 Sum_probs=18.3
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
-|++|+|||-..+.+...+..
T Consensus 42 ~G~~G~GKTtL~~~i~~~~~~ 62 (149)
T 2kjq_A 42 WGEEGAGKSHLLQAWVAQALE 62 (149)
T ss_dssp ESSSTTTTCHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHHHh
Confidence 599999999999999887743
No 108
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=82.28 E-value=0.51 Score=31.59 Aligned_cols=17 Identities=24% Similarity=0.141 Sum_probs=12.5
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|+||+|||....+++
T Consensus 81 i~g~TGsGKTt~~~~~~ 97 (235)
T 3llm_A 81 IRGATGCGKTTQVPQFI 97 (235)
T ss_dssp EECCTTSSHHHHHHHHH
T ss_pred EEeCCCCCcHHhHHHHH
Confidence 35899999996555444
No 109
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=82.18 E-value=0.56 Score=29.82 Aligned_cols=20 Identities=10% Similarity=-0.054 Sum_probs=17.1
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-.++.+.++|
T Consensus 17 l~G~~GsGKsT~a~~L~~~l 36 (199)
T 2bwj_A 17 IIGGPGSGKGTQCEKLVEKY 36 (199)
T ss_dssp EEECTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35899999999999988765
No 110
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=82.07 E-value=0.65 Score=31.49 Aligned_cols=19 Identities=16% Similarity=0.099 Sum_probs=16.6
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|++|.|||.+++.+.+.+
T Consensus 70 ~G~~GtGKT~la~~ia~~~ 88 (272)
T 1d2n_A 70 EGPPHSGKTALAAKIAEES 88 (272)
T ss_dssp ECSTTSSHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHh
Confidence 5999999999999887764
No 111
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=82.04 E-value=0.64 Score=32.34 Aligned_cols=20 Identities=15% Similarity=0.129 Sum_probs=17.2
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|+|||-+.+.+...|
T Consensus 14 i~G~~GsGKsTla~~la~~l 33 (233)
T 3r20_A 14 VDGPAGTGKSSVSRGLARAL 33 (233)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35999999999999987765
No 112
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=81.63 E-value=0.84 Score=34.84 Aligned_cols=23 Identities=17% Similarity=0.027 Sum_probs=18.4
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
++++||+|||.+.-+++..++..
T Consensus 27 l~~~TGsGKTl~~~~~i~~~l~~ 49 (699)
T 4gl2_A 27 ICLPTGCGKTRVAVYIAKDHLDK 49 (699)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHHH
T ss_pred EEcCCCCcHHHHHHHHHHHHHHh
Confidence 47899999999988887765543
No 113
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=81.53 E-value=0.34 Score=34.27 Aligned_cols=20 Identities=15% Similarity=0.189 Sum_probs=14.4
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|+|.+|||||-.++.+...|
T Consensus 10 ItG~sGSGKSTva~~L~~~l 29 (290)
T 1a7j_A 10 VTGSSGAGTSTVKHTFDQIF 29 (290)
T ss_dssp EESCC---CCTHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHH
Confidence 57999999999999887755
No 114
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=81.53 E-value=0.81 Score=30.65 Aligned_cols=19 Identities=21% Similarity=0.013 Sum_probs=16.2
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|+|||-+.+.+...+
T Consensus 55 ~G~~G~GKTtl~~~i~~~~ 73 (254)
T 1ixz_A 55 VGPPGVGKTHLARAVAGEA 73 (254)
T ss_dssp ECCTTSSHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 5999999999999887654
No 115
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=81.38 E-value=0.49 Score=30.05 Aligned_cols=18 Identities=11% Similarity=0.115 Sum_probs=15.5
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|.+|||||-+.+.+...
T Consensus 15 ~G~~GsGKSTl~~~La~~ 32 (191)
T 1zp6_A 15 SGHPGSGKSTIAEALANL 32 (191)
T ss_dssp EECTTSCHHHHHHHHHTC
T ss_pred ECCCCCCHHHHHHHHHhc
Confidence 589999999999988653
No 116
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=81.31 E-value=0.63 Score=31.52 Aligned_cols=20 Identities=20% Similarity=0.335 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|||||-.++.+...|
T Consensus 27 I~G~~GSGKST~a~~L~~~l 46 (252)
T 1uj2_A 27 VSGGTASGKSSVCAKIVQLL 46 (252)
T ss_dssp EECSTTSSHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 47999999999999887754
No 117
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=81.26 E-value=0.65 Score=28.88 Aligned_cols=18 Identities=11% Similarity=0.139 Sum_probs=15.8
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
|.|.+|+|||-..+.+..
T Consensus 7 i~G~~GsGKST~a~~L~~ 24 (181)
T 1ly1_A 7 TIGCPGSGKSTWAREFIA 24 (181)
T ss_dssp EECCTTSSHHHHHHHHHH
T ss_pred EecCCCCCHHHHHHHHHh
Confidence 469999999999998876
No 118
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=81.18 E-value=0.35 Score=32.19 Aligned_cols=20 Identities=15% Similarity=0.027 Sum_probs=11.2
Q ss_pred CCCCcCCchHHHHHHHH-HHH
Q psy17057 1 MAGSTMRDKTPFKLVVL-LVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l-~~l 20 (80)
+.|++|||||-+.+++. ..+
T Consensus 32 l~Gp~GsGKSTl~~~L~~~~~ 52 (231)
T 3lnc_A 32 LSSPSGCGKTTVANKLLEKQK 52 (231)
T ss_dssp EECSCC----CHHHHHHC---
T ss_pred EECCCCCCHHHHHHHHHhcCC
Confidence 35999999999999887 543
No 119
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=81.13 E-value=0.77 Score=29.30 Aligned_cols=21 Identities=19% Similarity=0.134 Sum_probs=18.0
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|.+|+|||-..+.+..+|-
T Consensus 18 l~G~~GsGKsT~~~~L~~~l~ 38 (186)
T 2yvu_A 18 LTGLPGSGKTTIATRLADLLQ 38 (186)
T ss_dssp EECCTTSSHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHH
Confidence 358999999999999988764
No 120
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=80.53 E-value=0.72 Score=31.48 Aligned_cols=19 Identities=21% Similarity=0.039 Sum_probs=16.7
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|++|.|||-+++.+...+
T Consensus 60 ~Gp~GtGKT~la~~la~~~ 78 (297)
T 3b9p_A 60 FGPPGNGKTLLARAVATEC 78 (297)
T ss_dssp ESSSSSCHHHHHHHHHHHT
T ss_pred ECcCCCCHHHHHHHHHHHh
Confidence 5999999999999887765
No 121
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=80.44 E-value=0.67 Score=32.45 Aligned_cols=21 Identities=24% Similarity=0.205 Sum_probs=18.4
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|++|.|||.+++.+.+.+.
T Consensus 75 l~GppGtGKT~la~~la~~l~ 95 (368)
T 3uk6_A 75 IAGQPGTGKTAIAMGMAQALG 95 (368)
T ss_dssp EEESTTSSHHHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHHHhc
Confidence 369999999999999988774
No 122
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=80.37 E-value=0.89 Score=31.77 Aligned_cols=19 Identities=16% Similarity=0.010 Sum_probs=16.9
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||.+++.+...+
T Consensus 42 ~GppGtGKT~la~aiA~~l 60 (293)
T 3t15_A 42 WGGKGQGKSFQCELVFRKM 60 (293)
T ss_dssp EECTTSCHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 4999999999999988765
No 123
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=80.35 E-value=0.64 Score=32.40 Aligned_cols=22 Identities=14% Similarity=0.157 Sum_probs=18.6
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|++|+|||-+.+.+...+..
T Consensus 41 l~Gp~G~GKTtl~~~la~~l~~ 62 (354)
T 1sxj_E 41 LYGPNGTGKKTRCMALLESIFG 62 (354)
T ss_dssp EECSTTSSHHHHHHTHHHHHSC
T ss_pred EECCCCCCHHHHHHHHHHHHcC
Confidence 3599999999999999887644
No 124
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=80.32 E-value=0.62 Score=30.16 Aligned_cols=18 Identities=17% Similarity=0.117 Sum_probs=15.5
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+|||||-..+++..
T Consensus 7 l~G~~GsGKST~~~~La~ 24 (206)
T 1jjv_A 7 LTGGIGSGKTTIANLFTD 24 (206)
T ss_dssp EECSTTSCHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 469999999999998855
No 125
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=80.21 E-value=0.86 Score=29.62 Aligned_cols=20 Identities=10% Similarity=-0.014 Sum_probs=16.8
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-.++.+...+
T Consensus 5 l~G~~GsGKsT~a~~L~~~~ 24 (216)
T 3fb4_A 5 LMGLPGAGKGTQAEQIIEKY 24 (216)
T ss_dssp EECSTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 46999999999999886654
No 126
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2
Probab=80.12 E-value=0.49 Score=34.66 Aligned_cols=18 Identities=17% Similarity=0.209 Sum_probs=14.8
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
|.|+||+|||+++...++
T Consensus 152 i~G~sG~GKStlal~l~~ 169 (312)
T 1knx_A 152 LTGRSGIGKSECALDLIN 169 (312)
T ss_dssp EEESSSSSHHHHHHHHHT
T ss_pred EEcCCCCCHHHHHHHHHH
Confidence 479999999999976544
No 127
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=80.06 E-value=0.89 Score=28.58 Aligned_cols=20 Identities=20% Similarity=0.064 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|-+|||||-..+.+..+|
T Consensus 5 l~G~~GsGKsT~~~~L~~~l 24 (195)
T 2pbr_A 5 FEGIDGSGKTTQAKKLYEYL 24 (195)
T ss_dssp EECSTTSCHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHH
Confidence 36999999999999998876
No 128
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=79.92 E-value=0.61 Score=31.73 Aligned_cols=20 Identities=15% Similarity=0.179 Sum_probs=17.4
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-+.+.+...+
T Consensus 37 l~G~~GsGKSTla~~L~~~l 56 (253)
T 2p5t_B 37 LGGQSGAGKTTIHRIKQKEF 56 (253)
T ss_dssp EESCGGGTTHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHhc
Confidence 46999999999999988765
No 129
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=79.85 E-value=0.87 Score=31.65 Aligned_cols=21 Identities=19% Similarity=-0.091 Sum_probs=18.3
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
-|++|.|||-+.+.+...+..
T Consensus 43 ~G~~GtGKT~la~~i~~~~~~ 63 (324)
T 1l8q_A 43 YGSVGTGKTHLLQAAGNEAKK 63 (324)
T ss_dssp ECSSSSSHHHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHHHH
Confidence 599999999999999887754
No 130
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=79.70 E-value=0.92 Score=28.74 Aligned_cols=19 Identities=21% Similarity=0.188 Sum_probs=17.1
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|.+|+|||-..+.+..+|
T Consensus 11 ~G~~GsGKST~~~~L~~~l 29 (179)
T 2pez_A 11 TGLSGAGKTTVSMALEEYL 29 (179)
T ss_dssp ECCTTSSHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHH
Confidence 5899999999999998876
No 131
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=79.48 E-value=0.79 Score=29.03 Aligned_cols=20 Identities=10% Similarity=-0.012 Sum_probs=16.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+...|
T Consensus 14 l~G~~GsGKsT~~~~La~~l 33 (196)
T 2c95_A 14 VVGGPGSGKGTQCEKIVQKY 33 (196)
T ss_dssp EEECTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35899999999999887765
No 132
>1e9r_A Conjugal transfer protein TRWB; coupling protein, bacterial conjugation, F1-ATPase-like quaternary structure, ring helicases; 2.4A {Escherichia coli} SCOP: c.37.1.11 PDB: 1e9s_A 1gki_A* 1gl7_A* 1gl6_A*
Probab=79.44 E-value=0.8 Score=33.34 Aligned_cols=23 Identities=17% Similarity=0.079 Sum_probs=18.3
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
|.|.||+|||...+.++..++..
T Consensus 58 i~G~tGsGKs~~~~~li~~~~~~ 80 (437)
T 1e9r_A 58 VNGATGTGKSVLLRELAYTGLLR 80 (437)
T ss_dssp EEECTTSSHHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHHC
Confidence 46899999999987777766553
No 133
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=79.41 E-value=1 Score=32.15 Aligned_cols=19 Identities=26% Similarity=0.153 Sum_probs=17.0
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|++|.|||.+++.+.+.+
T Consensus 78 ~Gp~GtGKT~la~~la~~l 96 (376)
T 1um8_A 78 IGPTGSGKTLMAQTLAKHL 96 (376)
T ss_dssp ECCTTSSHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 5999999999999988765
No 134
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=79.36 E-value=0.36 Score=37.12 Aligned_cols=20 Identities=20% Similarity=0.341 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|+||||||-+-+.++.++
T Consensus 265 I~GptGSGKTTlL~aL~~~i 284 (511)
T 2oap_1 265 VVGETASGKTTTLNAIMMFI 284 (511)
T ss_dssp EEESTTSSHHHHHHHHGGGS
T ss_pred EECCCCCCHHHHHHHHHhhC
Confidence 46999999999999887765
No 135
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=79.23 E-value=0.66 Score=33.94 Aligned_cols=19 Identities=16% Similarity=0.179 Sum_probs=16.1
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.|+||+|||+++..++..
T Consensus 149 ~~G~sG~GKSt~a~~l~~~ 167 (314)
T 1ko7_A 149 ITGDSGIGKSETALELIKR 167 (314)
T ss_dssp EEESTTSSHHHHHHHHHHT
T ss_pred EEeCCCCCHHHHHHHHHhc
Confidence 4799999999999887763
No 136
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=79.14 E-value=1.1 Score=30.66 Aligned_cols=19 Identities=21% Similarity=0.013 Sum_probs=16.2
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|+|||-+.+.+...+
T Consensus 79 ~Gp~GtGKTtl~~~i~~~~ 97 (278)
T 1iy2_A 79 VGPPGVGKTHLARAVAGEA 97 (278)
T ss_dssp ECCTTSSHHHHHHHHHHHT
T ss_pred ECCCcChHHHHHHHHHHHc
Confidence 5999999999999887654
No 137
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=79.12 E-value=0.85 Score=30.84 Aligned_cols=19 Identities=21% Similarity=0.037 Sum_probs=16.5
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++.+...+
T Consensus 57 ~G~~GtGKT~la~~la~~~ 75 (285)
T 3h4m_A 57 YGPPGTGKTLLAKAVATET 75 (285)
T ss_dssp ESSSSSSHHHHHHHHHHHT
T ss_pred ECCCCCcHHHHHHHHHHHh
Confidence 5999999999999887754
No 138
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=79.09 E-value=0.71 Score=29.22 Aligned_cols=18 Identities=17% Similarity=0.300 Sum_probs=14.7
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
|.|++|+|||-+-..|.-
T Consensus 31 i~G~NGsGKStll~ai~~ 48 (182)
T 3kta_A 31 IVGANGSGKSNIGDAILF 48 (182)
T ss_dssp EEECTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 459999999999887644
No 139
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=78.95 E-value=1.2 Score=32.10 Aligned_cols=20 Identities=15% Similarity=0.167 Sum_probs=18.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|-|++|+|||-..++++..+
T Consensus 131 IvGpsGsGKSTLl~lL~gl~ 150 (305)
T 2v9p_A 131 FIGPPNTGKSMLCNSLIHFL 150 (305)
T ss_dssp EECSSSSSHHHHHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHhhhc
Confidence 35999999999999999876
No 140
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19
Probab=78.92 E-value=0.68 Score=31.40 Aligned_cols=20 Identities=20% Similarity=0.114 Sum_probs=15.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|+||+|||.+...++..+
T Consensus 113 l~~~tG~GKT~~a~~~~~~~ 132 (237)
T 2fz4_A 113 IVLPTGSGKTHVAMAAINEL 132 (237)
T ss_dssp EEESSSTTHHHHHHHHHHHS
T ss_pred EEeCCCCCHHHHHHHHHHHc
Confidence 35799999999988776653
No 141
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=78.88 E-value=1 Score=28.42 Aligned_cols=20 Identities=15% Similarity=-0.002 Sum_probs=16.8
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-..+.+.+.|
T Consensus 9 l~G~~GsGKST~~~~La~~l 28 (186)
T 3cm0_A 9 FLGPPGAGKGTQASRLAQEL 28 (186)
T ss_dssp EECCTTSCHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35899999999999887654
No 142
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=78.83 E-value=0.82 Score=31.34 Aligned_cols=20 Identities=25% Similarity=0.218 Sum_probs=17.1
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|.|||.+++.+...+
T Consensus 43 l~G~~GtGKT~la~~i~~~~ 62 (324)
T 1hqc_A 43 LFGPPGLGKTTLAHVIAHEL 62 (324)
T ss_dssp EECCTTCCCHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35999999999999887755
No 143
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=78.75 E-value=1.3 Score=31.12 Aligned_cols=21 Identities=14% Similarity=0.048 Sum_probs=18.5
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
.|++|+|||-+.+.+.+.+..
T Consensus 52 ~Gp~G~GKTtla~~la~~l~~ 72 (340)
T 1sxj_C 52 YGPPGTGKTSTIVALAREIYG 72 (340)
T ss_dssp ECSSSSSHHHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHHcC
Confidence 599999999999999988743
No 144
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=78.72 E-value=1 Score=28.72 Aligned_cols=21 Identities=10% Similarity=-0.021 Sum_probs=18.0
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|.+|+|||-..+.+..+|-
T Consensus 9 i~G~~GsGKsT~~~~L~~~l~ 29 (213)
T 2plr_A 9 FEGIDGSGKSSQATLLKDWIE 29 (213)
T ss_dssp EECCTTSSHHHHHHHHHHHHT
T ss_pred EEcCCCCCHHHHHHHHHHHHh
Confidence 368999999999999988763
No 145
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=78.49 E-value=0.88 Score=31.17 Aligned_cols=21 Identities=10% Similarity=0.074 Sum_probs=17.8
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|++|+|||-..+.++..+.
T Consensus 35 i~G~~GsGKTtl~~~l~~~~~ 55 (279)
T 1nlf_A 35 LVSPGGAGKSMLALQLAAQIA 55 (279)
T ss_dssp EEESTTSSHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHh
Confidence 479999999999998887554
No 146
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=78.45 E-value=0.69 Score=29.80 Aligned_cols=18 Identities=11% Similarity=0.082 Sum_probs=15.7
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+|+|||-..+++..
T Consensus 6 i~G~~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 6 LTGNIGCGKSTVAQMFRE 23 (204)
T ss_dssp EEECTTSSHHHHHHHHHH
T ss_pred EECCCCcCHHHHHHHHHH
Confidence 469999999999998866
No 147
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=78.33 E-value=1.1 Score=30.91 Aligned_cols=22 Identities=32% Similarity=0.197 Sum_probs=18.8
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+-|++|.|||.+.+.+...+..
T Consensus 49 l~G~~G~GKT~l~~~~~~~~~~ 70 (387)
T 2v1u_A 49 LYGLTGTGKTAVARLVLRRLEA 70 (387)
T ss_dssp ECBCTTSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 4699999999999999887744
No 148
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=78.25 E-value=0.83 Score=29.70 Aligned_cols=19 Identities=16% Similarity=0.025 Sum_probs=13.1
Q ss_pred CCCcCCchHHHHHH-HHHHH
Q psy17057 2 AGSTMRDKTPFKLV-VLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~-~l~~l 20 (80)
.++||+|||.+.-+ ++.++
T Consensus 57 ~~pTGsGKT~~~~~~~l~~l 76 (224)
T 1qde_A 57 QAQSGTGKTGTFSIAALQRI 76 (224)
T ss_dssp ECCTTSSHHHHHHHHHHHHC
T ss_pred ECCCCCcHHHHHHHHHHHHH
Confidence 57899999988443 33433
No 149
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A 3mwj_A 3mwk_A* 3mwl_A* 3nbf_A* 3nej_A
Probab=78.14 E-value=1 Score=28.69 Aligned_cols=17 Identities=18% Similarity=-0.052 Sum_probs=12.8
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
.++||+|||.+.-+.+.
T Consensus 44 ~~~TGsGKT~~~~~~~~ 60 (207)
T 2gxq_A 44 QARTGTGKTLAFALPIA 60 (207)
T ss_dssp ECCTTSCHHHHHHHHHH
T ss_pred ECCCCChHHHHHHHHHH
Confidence 47899999998555443
No 150
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=77.90 E-value=1.1 Score=31.23 Aligned_cols=22 Identities=18% Similarity=0.054 Sum_probs=18.0
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
++.+||+|||.+.-+++..++.
T Consensus 28 l~~~tG~GKT~~~~~~~~~~~~ 49 (494)
T 1wp9_A 28 IVLPTGLGKTLIAMMIAEYRLT 49 (494)
T ss_dssp EECCTTSCHHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHHh
Confidence 4689999999999888776654
No 151
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=77.88 E-value=0.95 Score=29.46 Aligned_cols=20 Identities=20% Similarity=0.209 Sum_probs=16.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||.+.+.+...|
T Consensus 8 i~G~~gsGkst~~~~l~~~~ 27 (219)
T 2h92_A 8 LDGPAAAGKSTIAKRVASEL 27 (219)
T ss_dssp EECCTTSSHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHhc
Confidence 46999999999999887643
No 152
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=77.84 E-value=0.6 Score=29.37 Aligned_cols=20 Identities=20% Similarity=0.016 Sum_probs=12.8
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-..+.+...|
T Consensus 10 l~G~~GsGKST~a~~La~~l 29 (183)
T 2vli_A 10 INGPFGVGKTHTAHTLHERL 29 (183)
T ss_dssp EECCC----CHHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHHHhc
Confidence 46999999999999887654
No 153
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=77.72 E-value=1.1 Score=29.67 Aligned_cols=21 Identities=24% Similarity=0.124 Sum_probs=18.0
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
|-|++|+|||-+.+.+...+-
T Consensus 6 i~G~nG~GKTTll~~l~g~~~ 26 (189)
T 2i3b_A 6 LTGPPGVGKTTLIHKASEVLK 26 (189)
T ss_dssp EESCCSSCHHHHHHHHHHHHH
T ss_pred EECCCCChHHHHHHHHHhhcc
Confidence 359999999999999988764
No 154
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=77.68 E-value=1.3 Score=30.89 Aligned_cols=19 Identities=16% Similarity=-0.036 Sum_probs=16.2
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|+|||-+++.+...+
T Consensus 55 ~Gp~GtGKT~la~ala~~~ 73 (301)
T 3cf0_A 55 YGPPGCGKTLLAKAIANEC 73 (301)
T ss_dssp ECSSSSSHHHHHHHHHHHT
T ss_pred ECCCCcCHHHHHHHHHHHh
Confidence 5999999999999887654
No 155
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=77.67 E-value=0.88 Score=32.06 Aligned_cols=19 Identities=11% Similarity=0.069 Sum_probs=16.0
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
|-||+|.|||.+++.+-.+
T Consensus 30 i~Ge~GtGKt~lAr~i~~~ 48 (304)
T 1ojl_A 30 IHGDSGTGKELVARALHAC 48 (304)
T ss_dssp EESCTTSCHHHHHHHHHHH
T ss_pred EECCCCchHHHHHHHHHHh
Confidence 3599999999999988654
No 156
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=77.66 E-value=0.95 Score=31.44 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=16.8
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|.|||.+++.+...+
T Consensus 60 l~G~~GtGKT~la~~ia~~~ 79 (338)
T 3pfi_A 60 FSGPAGLGKTTLANIISYEM 79 (338)
T ss_dssp EECSTTSSHHHHHHHHHHHT
T ss_pred EECcCCCCHHHHHHHHHHHh
Confidence 35999999999999886654
No 157
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=77.55 E-value=1.1 Score=32.05 Aligned_cols=21 Identities=14% Similarity=-0.100 Sum_probs=17.8
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
|.|++|+|||-+.+.+..++.
T Consensus 107 lvG~nGsGKTTll~~Lagll~ 127 (304)
T 1rj9_A 107 VVGVNGVGKTTTIAKLGRYYQ 127 (304)
T ss_dssp EECSTTSSHHHHHHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHHHHHH
Confidence 359999999999998887764
No 158
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=77.41 E-value=0.75 Score=33.99 Aligned_cols=20 Identities=25% Similarity=0.275 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|+|+||+|||.++.-+.+.+
T Consensus 8 i~GptgsGKt~la~~La~~~ 27 (322)
T 3exa_A 8 IVGPTAVGKTKTSVMLAKRL 27 (322)
T ss_dssp EECCTTSCHHHHHHHHHHTT
T ss_pred EECCCcCCHHHHHHHHHHhC
Confidence 47999999999999887755
No 159
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=77.40 E-value=1.2 Score=29.20 Aligned_cols=21 Identities=14% Similarity=0.260 Sum_probs=18.0
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|.+|+|||-..+.+..+|-
T Consensus 30 ~~G~~GsGKsT~~~~l~~~l~ 50 (211)
T 1m7g_A 30 LTGLSASGKSTLAVELEHQLV 50 (211)
T ss_dssp EECSTTSSHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhc
Confidence 358999999999999988764
No 160
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=77.37 E-value=0.85 Score=29.82 Aligned_cols=18 Identities=11% Similarity=0.052 Sum_probs=15.4
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+|||||-..+.+-.
T Consensus 9 i~G~~GSGKST~~~~L~~ 26 (218)
T 1vht_A 9 LTGGIGSGKSTVANAFAD 26 (218)
T ss_dssp EECCTTSCHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 469999999999998755
No 161
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=77.32 E-value=0.72 Score=32.15 Aligned_cols=20 Identities=15% Similarity=0.096 Sum_probs=16.1
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|+||+|||..+.-+++..
T Consensus 39 I~GpsGsGKStLA~~La~~g 58 (205)
T 2qmh_A 39 ITGDSGVGKSETALELVQRG 58 (205)
T ss_dssp EECCCTTTTHHHHHHHHTTT
T ss_pred EECCCCCCHHHHHHHHHHhC
Confidence 47999999999888776643
No 162
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=77.29 E-value=0.34 Score=30.20 Aligned_cols=18 Identities=6% Similarity=-0.079 Sum_probs=14.5
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+-||+|.|||.+++.+-.
T Consensus 32 l~G~~GtGKt~lA~~i~~ 49 (143)
T 3co5_A 32 LTGEAGSPFETVARYFHK 49 (143)
T ss_dssp EEEETTCCHHHHHGGGCC
T ss_pred EECCCCccHHHHHHHHHH
Confidence 359999999999887643
No 163
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=77.17 E-value=0.97 Score=29.43 Aligned_cols=20 Identities=10% Similarity=-0.051 Sum_probs=16.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.+|+|||-.++.+...+
T Consensus 5 l~G~~GsGKsT~a~~L~~~~ 24 (216)
T 3dl0_A 5 LMGLPGAGKGTQGERIVEKY 24 (216)
T ss_dssp EECSTTSSHHHHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 46999999999999886644
No 164
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=77.17 E-value=1.5 Score=30.19 Aligned_cols=21 Identities=24% Similarity=0.102 Sum_probs=18.4
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
-|++|.|||.+.+.+.+.+..
T Consensus 64 ~G~~G~GKT~la~~la~~l~~ 84 (353)
T 1sxj_D 64 YGPPGTGKTSTILALTKELYG 84 (353)
T ss_dssp ECSTTSSHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHhCC
Confidence 599999999999999888753
No 165
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=77.08 E-value=1.8 Score=30.83 Aligned_cols=21 Identities=33% Similarity=0.343 Sum_probs=14.6
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.++||+|||.+.-+.+.++.
T Consensus 41 v~apTGsGKT~~~l~~~~~~~ 61 (414)
T 3oiy_A 41 MVAPTGVGKTTFGMMTALWLA 61 (414)
T ss_dssp CCSCSSSSHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHh
Confidence 467999999995555544443
No 166
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=76.90 E-value=1.2 Score=30.04 Aligned_cols=20 Identities=20% Similarity=0.208 Sum_probs=17.8
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.|++|.|||.+.+.+.+.+.
T Consensus 44 ~G~~G~GKt~la~~l~~~l~ 63 (319)
T 2chq_A 44 SGPPGTGKTATAIALARDLF 63 (319)
T ss_dssp ESSSSSSHHHHHHHHHHHHH
T ss_pred ECcCCcCHHHHHHHHHHHhc
Confidence 59999999999999988763
No 167
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=76.77 E-value=1.2 Score=30.43 Aligned_cols=20 Identities=25% Similarity=0.164 Sum_probs=15.2
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.++||+|||.+.-+.+..++
T Consensus 50 ~~~TGsGKT~~~~~~~~~~~ 69 (367)
T 1hv8_A 50 QARTGSGKTASFAIPLIELV 69 (367)
T ss_dssp ECCSSSSHHHHHHHHHHHHS
T ss_pred ECCCCChHHHHHHHHHHHHh
Confidence 57999999998766655443
No 168
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=76.77 E-value=0.95 Score=33.34 Aligned_cols=20 Identities=25% Similarity=0.399 Sum_probs=17.4
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|+|+||+|||..+.-+.+.+
T Consensus 15 i~GptgsGKt~la~~La~~~ 34 (316)
T 3foz_A 15 LMGPTASGKTALAIELRKIL 34 (316)
T ss_dssp EECCTTSCHHHHHHHHHHHS
T ss_pred EECCCccCHHHHHHHHHHhC
Confidence 47999999999999887765
No 169
>4a2p_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.00A {Anas platyrhynchos} PDB: 4a36_A*
Probab=76.66 E-value=1.2 Score=32.47 Aligned_cols=22 Identities=14% Similarity=0.093 Sum_probs=17.7
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
+.+||+|||.+.-+.+.+++..
T Consensus 28 ~~~tGsGKT~~~~~~~~~~~~~ 49 (556)
T 4a2p_A 28 CAPTGSGKTFVSILICEHHFQN 49 (556)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHT
T ss_pred EcCCCChHHHHHHHHHHHHHHh
Confidence 5799999999988877766554
No 170
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=76.65 E-value=0.69 Score=32.00 Aligned_cols=21 Identities=14% Similarity=0.069 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+-|++|.|||.+++.+...+-
T Consensus 50 l~G~~GtGKT~la~~la~~~~ 70 (350)
T 1g8p_A 50 VFGDRGTGKSTAVRALAALLP 70 (350)
T ss_dssp EECCGGGCTTHHHHHHHHHSC
T ss_pred EECCCCccHHHHHHHHHHhCc
Confidence 359999999999998877653
No 171
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomi consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=76.64 E-value=1.3 Score=28.98 Aligned_cols=17 Identities=24% Similarity=-0.005 Sum_probs=13.1
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
.++||+|||.+.-+.+.
T Consensus 63 ~apTGsGKT~~~~l~~~ 79 (228)
T 3iuy_A 63 VAQTGTGKTLSYLMPGF 79 (228)
T ss_dssp ECCTTSCHHHHHHHHHH
T ss_pred ECCCCChHHHHHHHHHH
Confidence 46899999998766543
No 172
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=76.62 E-value=1.3 Score=28.60 Aligned_cols=20 Identities=15% Similarity=0.071 Sum_probs=17.1
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-.++.+...|
T Consensus 25 l~G~~GsGKST~a~~La~~l 44 (201)
T 2cdn_A 25 LLGPPGAGKGTQAVKLAEKL 44 (201)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35899999999999988765
No 173
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=76.60 E-value=0.9 Score=30.25 Aligned_cols=20 Identities=0% Similarity=-0.257 Sum_probs=16.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|+.|+|||++.+.+...|
T Consensus 11 i~g~~GsGk~ti~~~la~~l 30 (201)
T 3fdi_A 11 IGREFGSGGHLVAKKLAEHY 30 (201)
T ss_dssp EEECTTSSHHHHHHHHHHHT
T ss_pred EeCCCCCCHHHHHHHHHHHh
Confidence 46899999999999887754
No 174
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=76.59 E-value=0.91 Score=31.01 Aligned_cols=18 Identities=11% Similarity=0.156 Sum_probs=14.9
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+-|++|||||-.-+++.-
T Consensus 36 iiG~nGsGKSTLl~~l~G 53 (235)
T 3tif_A 36 IMGPSGSGKSTMLNIIGC 53 (235)
T ss_dssp EECSTTSSHHHHHHHHTT
T ss_pred EECCCCCcHHHHHHHHhc
Confidence 359999999998887754
No 175
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=76.50 E-value=1.2 Score=30.96 Aligned_cols=22 Identities=14% Similarity=-0.019 Sum_probs=18.4
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|++|.|||.+.+.+...+..
T Consensus 49 i~G~~G~GKTtl~~~l~~~~~~ 70 (389)
T 1fnn_A 49 LLGRPGTGKTVTLRKLWELYKD 70 (389)
T ss_dssp EECCTTSSHHHHHHHHHHHHTT
T ss_pred EECCCCCCHHHHHHHHHHHHhh
Confidence 3599999999999998887643
No 176
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=76.48 E-value=1 Score=28.91 Aligned_cols=20 Identities=10% Similarity=-0.090 Sum_probs=16.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+.+.+
T Consensus 20 l~G~~GsGKsT~~~~L~~~~ 39 (203)
T 1ukz_A 20 VLGGPGAGKGTQCEKLVKDY 39 (203)
T ss_dssp EECSTTSSHHHHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHHHHc
Confidence 35999999999998887653
No 177
>3ly5_A ATP-dependent RNA helicase DDX18; alpha-beta, structural genomics, structural genomics consort ATP-binding, hydrolase, nucleotide-binding, RNA-B; 2.80A {Homo sapiens}
Probab=76.43 E-value=1.5 Score=29.80 Aligned_cols=20 Identities=30% Similarity=0.177 Sum_probs=15.0
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.++||+|||.+.-+.+...+
T Consensus 97 ~a~TGsGKT~~~~l~~l~~l 116 (262)
T 3ly5_A 97 AAKTGSGKTLAFLIPAVELI 116 (262)
T ss_dssp CCCTTSCHHHHHHHHHHHHH
T ss_pred EccCCCCchHHHHHHHHHHH
Confidence 57899999998776655443
No 178
>1t6n_A Probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; HET: FLC; 1.94A {Homo sapiens} SCOP: c.37.1.19
Probab=76.42 E-value=1.2 Score=28.85 Aligned_cols=20 Identities=20% Similarity=0.117 Sum_probs=15.3
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
..+||+|||.+..+.+...+
T Consensus 57 ~~~TGsGKT~~~~~~~~~~~ 76 (220)
T 1t6n_A 57 QAKSGMGKTAVFVLATLQQL 76 (220)
T ss_dssp ECCTTSCHHHHHHHHHHHHC
T ss_pred ECCCCCchhhhhhHHHHHhh
Confidence 46899999998877666543
No 179
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=76.40 E-value=0.41 Score=34.49 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=16.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|+||||||-+.+.++.++
T Consensus 176 i~G~~GsGKTTll~~l~g~~ 195 (330)
T 2pt7_A 176 VCGGTGSGKTTYIKSIMEFI 195 (330)
T ss_dssp EEESTTSCHHHHHHHGGGGS
T ss_pred EECCCCCCHHHHHHHHhCCC
Confidence 46999999999999887754
No 180
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=76.32 E-value=1.3 Score=29.07 Aligned_cols=17 Identities=41% Similarity=0.219 Sum_probs=13.0
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
.++||+|||.+.-+.+.
T Consensus 68 ~a~TGsGKT~~~~~~~l 84 (236)
T 2pl3_A 68 AAKTGSGKTLAFLVPVL 84 (236)
T ss_dssp ECCTTSCHHHHHHHHHH
T ss_pred EeCCCCcHHHHHHHHHH
Confidence 47899999998666443
No 181
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=76.29 E-value=0.99 Score=33.03 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=17.5
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.||+|||..++.+.+.+
T Consensus 10 i~GptGsGKTtla~~La~~l 29 (323)
T 3crm_A 10 LMGPTAAGKTDLAMALADAL 29 (323)
T ss_dssp EECCTTSCHHHHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHHHHc
Confidence 47999999999999888765
No 182
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=75.99 E-value=1.7 Score=30.75 Aligned_cols=19 Identities=26% Similarity=0.254 Sum_probs=17.3
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|+|||-+.+.+...+
T Consensus 57 ~Gp~G~GKTTLa~~ia~~l 75 (334)
T 1in4_A 57 AGPPGLGKTTLAHIIASEL 75 (334)
T ss_dssp ESSTTSSHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHh
Confidence 5999999999999998876
No 183
>3tbk_A RIG-I helicase domain; DECH helicase, ATP binding, hydrolase; HET: ANP; 2.14A {Mus musculus}
Probab=75.93 E-value=1.3 Score=32.13 Aligned_cols=22 Identities=23% Similarity=0.107 Sum_probs=17.6
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
+.+||+|||.+.-+.+..++..
T Consensus 25 ~~~tGsGKT~~~~~~~~~~~~~ 46 (555)
T 3tbk_A 25 CAPTGCGKTFVSLLICEHHLKK 46 (555)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHT
T ss_pred EeCCCChHHHHHHHHHHHHHHh
Confidence 5799999999988877766554
No 184
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=75.90 E-value=0.85 Score=29.18 Aligned_cols=15 Identities=27% Similarity=0.363 Sum_probs=13.0
Q ss_pred CCCCcCCchHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLV 15 (80)
Q Consensus 1 ~aG~sg~gKte~~k~ 15 (80)
|-|++|||||-..+.
T Consensus 14 l~G~nGsGKSTl~~~ 28 (171)
T 4gp7_A 14 LIGSSGSGKSTFAKK 28 (171)
T ss_dssp EECCTTSCHHHHHHH
T ss_pred EECCCCCCHHHHHHH
Confidence 359999999999994
No 185
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=75.84 E-value=1.1 Score=34.10 Aligned_cols=20 Identities=20% Similarity=0.290 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|+|.||+|||.++.-+...+
T Consensus 7 i~GptgsGKttla~~La~~~ 26 (409)
T 3eph_A 7 IAGTTGVGKSQLSIQLAQKF 26 (409)
T ss_dssp EEECSSSSHHHHHHHHHHHH
T ss_pred EECcchhhHHHHHHHHHHHC
Confidence 57999999999999888766
No 186
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=75.76 E-value=1.3 Score=30.78 Aligned_cols=20 Identities=20% Similarity=0.184 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-+.+++...|
T Consensus 53 l~G~~GsGKSTl~~~La~~l 72 (250)
T 3nwj_A 53 LVGMMGSGKTTVGKIMARSL 72 (250)
T ss_dssp EECSTTSCHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHhc
Confidence 35999999999999998744
No 187
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=75.61 E-value=1.3 Score=31.53 Aligned_cols=22 Identities=18% Similarity=-0.014 Sum_probs=18.1
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+-|++|+|||-+.+.+..++..
T Consensus 105 lvG~nGsGKTTll~~Lag~l~~ 126 (302)
T 3b9q_A 105 IVGVNGGGKTTSLGKLAHRLKN 126 (302)
T ss_dssp EECCTTSCHHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHHH
Confidence 3599999999999988877643
No 188
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=75.56 E-value=1.4 Score=27.80 Aligned_cols=20 Identities=15% Similarity=0.086 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+..+|
T Consensus 5 l~G~~GsGKsT~~~~L~~~l 24 (197)
T 2z0h_A 5 FEGIDGSGKSTQIQLLAQYL 24 (197)
T ss_dssp EECSTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHH
Confidence 35999999999999998877
No 189
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=75.49 E-value=1.4 Score=35.26 Aligned_cols=21 Identities=24% Similarity=0.233 Sum_probs=18.4
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|++|.|||.+++.+...+.
T Consensus 593 l~Gp~GtGKT~lA~~la~~~~ 613 (854)
T 1qvr_A 593 FLGPTGVGKTELAKTLAATLF 613 (854)
T ss_dssp EBSCSSSSHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhc
Confidence 369999999999999988774
No 190
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=75.35 E-value=1.4 Score=29.33 Aligned_cols=20 Identities=10% Similarity=0.213 Sum_probs=16.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||.+.+++...|
T Consensus 21 i~G~~gsGKst~~~~l~~~l 40 (236)
T 1q3t_A 21 IDGPASSGKSTVAKIIAKDF 40 (236)
T ss_dssp EECSSCSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHc
Confidence 46999999999999887643
No 191
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helic binding, HOST-virus interaction, hydrolase; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=75.28 E-value=1.3 Score=29.48 Aligned_cols=18 Identities=17% Similarity=0.097 Sum_probs=13.2
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
.++||+|||.+.-+.+..
T Consensus 73 ~apTGsGKT~~~~l~~l~ 90 (237)
T 3bor_A 73 QAQSGTGKTATFAISILQ 90 (237)
T ss_dssp CCCSSHHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHH
Confidence 579999999885554443
No 192
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=75.10 E-value=1.2 Score=29.18 Aligned_cols=19 Identities=11% Similarity=0.036 Sum_probs=16.8
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|.+|+|||-..+.+...|
T Consensus 11 ~G~~GsGKsT~~~~La~~l 29 (222)
T 1zak_A 11 SGAPASGKGTQCELIKTKY 29 (222)
T ss_dssp EESTTSSHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 5899999999999988765
No 193
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=74.99 E-value=1.5 Score=30.10 Aligned_cols=19 Identities=11% Similarity=0.100 Sum_probs=16.1
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+-|++|||||-.-+++.-.
T Consensus 34 l~G~nGsGKSTLlk~l~Gl 52 (250)
T 2d2e_A 34 LMGPNGAGKSTLGKILAGD 52 (250)
T ss_dssp EECSTTSSHHHHHHHHHTC
T ss_pred EECCCCCCHHHHHHHHhCC
Confidence 3599999999999988764
No 194
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19
Probab=74.90 E-value=1.4 Score=28.16 Aligned_cols=18 Identities=22% Similarity=0.132 Sum_probs=13.1
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
.++||+|||.+.-+.+..
T Consensus 46 ~apTGsGKT~~~~~~~~~ 63 (206)
T 1vec_A 46 RAKNGTGKSGAYLIPLLE 63 (206)
T ss_dssp ECCSSSTTHHHHHHHHHH
T ss_pred ECCCCCchHHHHHHHHHH
Confidence 478999999876654443
No 195
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=74.86 E-value=1.8 Score=29.31 Aligned_cols=22 Identities=23% Similarity=0.092 Sum_probs=18.7
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|++|.|||.+.+.+.+.+..
T Consensus 47 l~G~~G~GKt~la~~l~~~l~~ 68 (323)
T 1sxj_B 47 ISGMPGIGKTTSVHCLAHELLG 68 (323)
T ss_dssp EECSTTSSHHHHHHHHHHHHHG
T ss_pred EECcCCCCHHHHHHHHHHHhcC
Confidence 3599999999999999888743
No 196
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=74.69 E-value=1.4 Score=28.21 Aligned_cols=19 Identities=16% Similarity=0.223 Sum_probs=16.6
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.|.+|+|||-..+.+...
T Consensus 15 l~G~~GsGKSTv~~~La~~ 33 (184)
T 1y63_A 15 ITGTPGTGKTSMAEMIAAE 33 (184)
T ss_dssp EECSTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHh
Confidence 3699999999999988776
No 197
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=74.64 E-value=1.4 Score=31.86 Aligned_cols=22 Identities=18% Similarity=-0.011 Sum_probs=18.1
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|.|++|+|||-+.+.+..++..
T Consensus 134 lvG~nGaGKTTll~~Lag~l~~ 155 (328)
T 3e70_C 134 FVGFNGSGKTTTIAKLANWLKN 155 (328)
T ss_dssp EECCTTSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHh
Confidence 3599999999999988877643
No 198
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=74.52 E-value=1.1 Score=32.46 Aligned_cols=20 Identities=15% Similarity=0.190 Sum_probs=17.1
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|+|||...+.++..+
T Consensus 136 I~G~~GsGKTTL~~~l~~~~ 155 (349)
T 1pzn_A 136 VFGEFGSGKTQLAHTLAVMV 155 (349)
T ss_dssp EEESTTSSHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 46999999999999887754
No 199
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=74.51 E-value=1.5 Score=29.12 Aligned_cols=19 Identities=11% Similarity=0.039 Sum_probs=16.4
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.|-+|||||...+++...
T Consensus 17 ltG~~GSGKSTva~~L~~~ 35 (192)
T 2grj_A 17 VTGKIGTGKSTVCEILKNK 35 (192)
T ss_dssp EECSTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHh
Confidence 4699999999999988775
No 200
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=74.47 E-value=1.5 Score=29.70 Aligned_cols=20 Identities=30% Similarity=0.232 Sum_probs=17.7
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.|++|.|||.+.+.+.+.+.
T Consensus 52 ~G~~G~GKT~la~~l~~~l~ 71 (327)
T 1iqp_A 52 AGPPGVGKTTAALALARELF 71 (327)
T ss_dssp ESCTTSSHHHHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHHHHhc
Confidence 59999999999999988764
No 201
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=74.33 E-value=1.5 Score=30.67 Aligned_cols=18 Identities=11% Similarity=0.106 Sum_probs=15.2
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+-|++|||||-.-+++.-
T Consensus 42 liG~nGsGKSTLl~~l~G 59 (266)
T 4g1u_C 42 IIGPNGAGKSTLLRLLTG 59 (266)
T ss_dssp EECCTTSCHHHHHHHHTS
T ss_pred EECCCCCcHHHHHHHHhc
Confidence 359999999999998854
No 202
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=74.31 E-value=1.5 Score=30.44 Aligned_cols=22 Identities=18% Similarity=0.099 Sum_probs=18.8
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|+.|.|||.+.+.+.+.+..
T Consensus 43 l~G~~G~GKT~la~~la~~l~~ 64 (373)
T 1jr3_A 43 FSGTRGVGKTSIARLLAKGLNC 64 (373)
T ss_dssp EESCTTSSHHHHHHHHHHHHSC
T ss_pred EECCCCCCHHHHHHHHHHHhCC
Confidence 3699999999999999887754
No 203
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=74.28 E-value=1.6 Score=30.02 Aligned_cols=18 Identities=22% Similarity=0.218 Sum_probs=15.5
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|||||-.-+++.-.
T Consensus 30 iG~nGsGKSTLl~~l~Gl 47 (240)
T 2onk_A 30 LGPTGAGKSVFLELIAGI 47 (240)
T ss_dssp ECCTTSSHHHHHHHHHTS
T ss_pred ECCCCCCHHHHHHHHhCC
Confidence 599999999999988654
No 204
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=74.17 E-value=1.4 Score=28.32 Aligned_cols=20 Identities=15% Similarity=0.169 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|-+|+|||-..+.+.++|
T Consensus 15 l~G~~GsGKST~~~~L~~~l 34 (212)
T 2wwf_A 15 FEGLDRSGKSTQSKLLVEYL 34 (212)
T ss_dssp EEESTTSSHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHH
Confidence 35889999999999998876
No 205
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=73.77 E-value=1.4 Score=28.23 Aligned_cols=20 Identities=15% Similarity=0.160 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|-+|+|||-..+.+..+|
T Consensus 14 l~G~~GsGKsT~~~~L~~~l 33 (215)
T 1nn5_A 14 LEGVDRAGKSTQSRKLVEAL 33 (215)
T ss_dssp EEESTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHH
Confidence 35889999999999998876
No 206
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=73.57 E-value=1.7 Score=31.08 Aligned_cols=19 Identities=16% Similarity=0.134 Sum_probs=16.8
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|+|||-..+++...+
T Consensus 176 vG~nGsGKSTLlk~L~gl~ 194 (365)
T 1lw7_A 176 LGGESSGKSVLVNKLAAVF 194 (365)
T ss_dssp ECCTTSHHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 4899999999999988765
No 207
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=73.46 E-value=1.1 Score=29.52 Aligned_cols=20 Identities=10% Similarity=0.082 Sum_probs=16.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+...|
T Consensus 12 l~G~~GsGKsT~a~~La~~l 31 (227)
T 1zd8_A 12 IMGAPGSGKGTVSSRITTHF 31 (227)
T ss_dssp EEECTTSSHHHHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHHHHc
Confidence 35899999999999887654
No 208
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=73.40 E-value=1.5 Score=34.26 Aligned_cols=19 Identities=32% Similarity=0.246 Sum_probs=17.2
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|++|.|||.+++.+...+
T Consensus 494 ~G~~GtGKT~la~~la~~l 512 (758)
T 1r6b_X 494 AGPTGVGKTEVTVQLSKAL 512 (758)
T ss_dssp ECSTTSSHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHh
Confidence 5999999999999998876
No 209
>3ch4_B Pmkase, phosphomevalonate kinase; parallel beta-sheet with the strand order 23145, walker A motif, cholesterol biosynthesis, lipid synthesis; 1.76A {Homo sapiens}
Probab=73.37 E-value=1.4 Score=30.34 Aligned_cols=20 Identities=15% Similarity=0.081 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|+.+|||+.+++++...+
T Consensus 16 itGk~~SGKd~va~~l~~~~ 35 (202)
T 3ch4_B 16 FSGKRKSGKDFVTEALQSRL 35 (202)
T ss_dssp EEECTTSSHHHHHHHHHHHH
T ss_pred EECCCCCChHHHHHHHHHHc
Confidence 46999999999999998744
No 210
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=73.33 E-value=1.4 Score=30.73 Aligned_cols=20 Identities=10% Similarity=0.095 Sum_probs=16.8
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|+|||-.-+.+...+
T Consensus 7 lvG~nGaGKSTLln~L~g~~ 26 (270)
T 3sop_A 7 VVGQSGLGKSTLVNTLFKSQ 26 (270)
T ss_dssp EEESSSSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHhCCC
Confidence 36999999999999887654
No 211
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=73.28 E-value=1.5 Score=34.42 Aligned_cols=20 Identities=20% Similarity=0.155 Sum_probs=17.9
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.|++|.|||.+++.+-..+.
T Consensus 527 ~Gp~GtGKT~lA~ala~~l~ 546 (758)
T 3pxi_A 527 LGPTGVGKTELARALAESIF 546 (758)
T ss_dssp ESCTTSSHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHhc
Confidence 59999999999999988873
No 212
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=73.27 E-value=0.5 Score=34.05 Aligned_cols=20 Identities=10% Similarity=0.208 Sum_probs=16.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|-|+||||||-..++++..+
T Consensus 85 ivG~sGsGKSTLl~ll~gl~ 104 (306)
T 3nh6_A 85 LVGPSGAGKSTILRLLFRFY 104 (306)
T ss_dssp EESSSCHHHHHHHHHHTTSS
T ss_pred EECCCCchHHHHHHHHHcCC
Confidence 35999999999999987754
No 213
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=73.07 E-value=1.7 Score=30.01 Aligned_cols=17 Identities=18% Similarity=0.112 Sum_probs=14.8
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|++|||||-.-+++.-
T Consensus 39 iG~nGsGKSTLlk~l~G 55 (257)
T 1g6h_A 39 IGPNGSGKSTLINVITG 55 (257)
T ss_dssp ECSTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHhC
Confidence 59999999999998854
No 214
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=72.87 E-value=1.8 Score=30.68 Aligned_cols=21 Identities=14% Similarity=0.006 Sum_probs=18.2
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+-|++|.|||-+...+...+.
T Consensus 157 l~G~~GtGKT~La~aia~~~~ 177 (308)
T 2qgz_A 157 LYGDMGIGKSYLLAAMAHELS 177 (308)
T ss_dssp EECSTTSSHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHH
Confidence 359999999999998888776
No 215
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=72.72 E-value=1.5 Score=31.07 Aligned_cols=22 Identities=23% Similarity=0.119 Sum_probs=18.0
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|.+|+|||-+...+..++..
T Consensus 110 lvG~~GsGKTTl~~~LA~~l~~ 131 (296)
T 2px0_A 110 LFGSTGAGKTTTLAKLAAISML 131 (296)
T ss_dssp EEESTTSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 3689999999999888877653
No 216
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, N project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=72.70 E-value=1.8 Score=28.75 Aligned_cols=18 Identities=22% Similarity=0.172 Sum_probs=13.4
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
.++||+|||.+.-+.+..
T Consensus 66 ~a~TGsGKT~~~~~~~l~ 83 (253)
T 1wrb_A 66 CAQTGSGKTAAFLIPIIN 83 (253)
T ss_dssp ECCTTSSHHHHHHHHHHH
T ss_pred ECCCCChHHHHHHHHHHH
Confidence 468999999986655443
No 217
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=72.70 E-value=1.5 Score=30.26 Aligned_cols=21 Identities=33% Similarity=0.159 Sum_probs=17.7
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
.|++|.|||.+.+.+...+..
T Consensus 51 ~G~~G~GKTtl~~~l~~~~~~ 71 (386)
T 2qby_A 51 YGLTGTGKTAVVKFVLSKLHK 71 (386)
T ss_dssp EECTTSSHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHH
Confidence 599999999999998886643
No 218
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=72.66 E-value=1.7 Score=33.25 Aligned_cols=19 Identities=26% Similarity=0.204 Sum_probs=17.0
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|+|||.+.+.+...+
T Consensus 114 ~Gp~GtGKTtlar~ia~~l 132 (543)
T 3m6a_A 114 AGPPGVGKTSLAKSIAKSL 132 (543)
T ss_dssp ESSSSSSHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHhc
Confidence 5999999999999997766
No 219
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=72.62 E-value=1.4 Score=30.68 Aligned_cols=19 Identities=11% Similarity=0.100 Sum_probs=16.1
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+-|++|||||-.-+++.-.
T Consensus 51 l~G~NGsGKSTLlk~l~Gl 69 (267)
T 2zu0_C 51 IMGPNGSGKSTLSATLAGR 69 (267)
T ss_dssp EECCTTSSHHHHHHHHHTC
T ss_pred EECCCCCCHHHHHHHHhCC
Confidence 3599999999999988664
No 220
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=72.61 E-value=1.5 Score=29.67 Aligned_cols=17 Identities=18% Similarity=0.276 Sum_probs=14.5
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|++|||||-.-+++.-
T Consensus 36 iG~nGsGKSTLl~~l~G 52 (224)
T 2pcj_A 36 IGASGSGKSTLLYILGL 52 (224)
T ss_dssp EECTTSCHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHhc
Confidence 59999999999988754
No 221
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=72.55 E-value=1.8 Score=29.55 Aligned_cols=21 Identities=19% Similarity=0.219 Sum_probs=18.1
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
|.|-+|||||-.++.+..+|.
T Consensus 9 l~G~pGSGKSTla~~La~~L~ 29 (260)
T 3a4m_A 9 LTGLPGVGKSTFSKNLAKILS 29 (260)
T ss_dssp EECCTTSSHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHH
Confidence 469999999999999988754
No 222
>3h1t_A Type I site-specific restriction-modification system, R (restriction) subunit; hydrolase, restriction enzyme HSDR, ATP-binding; 2.30A {Vibrio vulnificus}
Probab=72.40 E-value=1.6 Score=32.96 Aligned_cols=23 Identities=17% Similarity=0.040 Sum_probs=18.1
Q ss_pred CCCcCCchHHHHHHHHHHHhhhc
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~~ 24 (80)
+++||+|||.+.-.++..|....
T Consensus 204 ~~~TGsGKT~~~~~~~~~l~~~~ 226 (590)
T 3h1t_A 204 TMATGTGKTVVAFQISWKLWSAR 226 (590)
T ss_dssp EECTTSCHHHHHHHHHHHHHHTT
T ss_pred EecCCCChHHHHHHHHHHHHhcc
Confidence 57899999999877777776543
No 223
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=72.39 E-value=0.92 Score=33.59 Aligned_cols=20 Identities=15% Similarity=0.233 Sum_probs=17.5
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|.||+|||.+...+.+.|
T Consensus 45 I~GPTgsGKTtLa~~LA~~l 64 (339)
T 3a8t_A 45 LMGATGTGKSRLSIDLAAHF 64 (339)
T ss_dssp EECSTTSSHHHHHHHHHTTS
T ss_pred EECCCCCCHHHHHHHHHHHC
Confidence 47999999999999887765
No 224
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=72.22 E-value=2 Score=30.81 Aligned_cols=22 Identities=14% Similarity=0.042 Sum_probs=18.1
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|.|.+|+|||-+...+..++..
T Consensus 109 ivG~~GsGKTTl~~~LA~~l~~ 130 (306)
T 1vma_A 109 VVGVNGTGKTTSCGKLAKMFVD 130 (306)
T ss_dssp EECCTTSSHHHHHHHHHHHHHH
T ss_pred EEcCCCChHHHHHHHHHHHHHh
Confidence 4699999999998888877654
No 225
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=72.21 E-value=1.5 Score=29.88 Aligned_cols=19 Identities=16% Similarity=0.153 Sum_probs=15.9
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+-|++|||||-.-+++.-.
T Consensus 36 i~G~nGsGKSTLl~~l~Gl 54 (237)
T 2cbz_A 36 VVGQVGCGKSSLLSALLAE 54 (237)
T ss_dssp EECSTTSSHHHHHHHHTTC
T ss_pred EECCCCCCHHHHHHHHhcC
Confidence 3599999999999988654
No 226
>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=72.18 E-value=1.4 Score=28.66 Aligned_cols=18 Identities=22% Similarity=0.135 Sum_probs=13.3
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
.++||+|||.+.-+.+..
T Consensus 47 ~a~TGsGKT~~~~~~~l~ 64 (219)
T 1q0u_A 47 QSQTGTGKTHAYLLPIME 64 (219)
T ss_dssp ECCSSHHHHHHHHHHHHH
T ss_pred ECCCCChHHHHHHHHHHH
Confidence 478999999986554443
No 227
>3ber_A Probable ATP-dependent RNA helicase DDX47; DEAD, AMP, structural genomics, structural GEN consortium, SGC, ATP-binding, hydrolase; HET: AMP PGE; 1.40A {Homo sapiens}
Probab=72.10 E-value=1.9 Score=29.06 Aligned_cols=18 Identities=22% Similarity=0.008 Sum_probs=13.3
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
.++||+|||.+.-+.+..
T Consensus 86 ~a~TGsGKT~~~~~~il~ 103 (249)
T 3ber_A 86 LAETGSGKTGAFALPILN 103 (249)
T ss_dssp ECCTTSCHHHHHHHHHHH
T ss_pred EcCCCCCchhHhHHHHHH
Confidence 468999999986655443
No 228
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=72.08 E-value=1.2 Score=30.28 Aligned_cols=19 Identities=32% Similarity=0.375 Sum_probs=15.8
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+-|++|||||-.-+++.-.
T Consensus 39 i~G~nGsGKSTLl~~l~Gl 57 (229)
T 2pze_A 39 VAGSTGAGKTSLLMMIMGE 57 (229)
T ss_dssp EECCTTSSHHHHHHHHTTS
T ss_pred EECCCCCCHHHHHHHHhCC
Confidence 3599999999999988653
No 229
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=72.05 E-value=1.5 Score=30.52 Aligned_cols=23 Identities=17% Similarity=0.023 Sum_probs=19.0
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
+.|++|.|||.+.+.+.+.+...
T Consensus 50 l~G~~G~GKT~la~~l~~~~~~~ 72 (384)
T 2qby_B 50 FLGLTGTGKTFVSKYIFNEIEEV 72 (384)
T ss_dssp EEECTTSSHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHH
Confidence 35999999999999998876443
No 230
>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural GEN consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=71.94 E-value=2 Score=28.38 Aligned_cols=17 Identities=24% Similarity=0.094 Sum_probs=12.7
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
.++||+|||.+.-+.+.
T Consensus 72 ~a~TGsGKT~~~~l~~l 88 (245)
T 3dkp_A 72 SAPTGSGKTLAFSIPIL 88 (245)
T ss_dssp ECCTTSCHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHH
Confidence 46899999998655443
No 231
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=71.91 E-value=2.2 Score=29.63 Aligned_cols=18 Identities=28% Similarity=0.080 Sum_probs=15.6
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|+|||-+.+.+...
T Consensus 50 ~Gp~GtGKTtLakala~~ 67 (274)
T 2x8a_A 50 AGPPGCGKTLLAKAVANE 67 (274)
T ss_dssp ESSTTSCHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHH
Confidence 599999999999988664
No 232
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=71.88 E-value=1.6 Score=28.46 Aligned_cols=20 Identities=10% Similarity=0.162 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-..+.+...+
T Consensus 5 l~G~~GsGKsT~a~~L~~~~ 24 (214)
T 1e4v_A 5 LLGAPVAGKGTQAQFIMEKY 24 (214)
T ss_dssp EEESTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35899999999999988765
No 233
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=71.84 E-value=2.5 Score=29.56 Aligned_cols=19 Identities=16% Similarity=0.008 Sum_probs=16.3
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++.+...+
T Consensus 57 ~GppGtGKT~la~aia~~~ 75 (322)
T 3eie_A 57 YGPPGTGKSYLAKAVATEA 75 (322)
T ss_dssp ECSSSSCHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHH
Confidence 5999999999999887654
No 234
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=71.64 E-value=1.8 Score=29.79 Aligned_cols=19 Identities=16% Similarity=0.055 Sum_probs=14.2
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.++||+|||.+.-+.+...
T Consensus 50 ~a~TGsGKT~~~~~~~~~~ 68 (395)
T 3pey_A 50 QSQSGTGKTAAFSLTMLTR 68 (395)
T ss_dssp ECCTTSCHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHH
Confidence 5789999999876655443
No 235
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=71.61 E-value=1.9 Score=29.67 Aligned_cols=19 Identities=11% Similarity=0.228 Sum_probs=15.7
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+-|++|||||-.-+++.-.
T Consensus 40 i~G~nGsGKSTLl~~l~Gl 58 (247)
T 2ff7_A 40 IVGRSGSGKSTLTKLIQRF 58 (247)
T ss_dssp EECSTTSSHHHHHHHHTTS
T ss_pred EECCCCCCHHHHHHHHhcC
Confidence 3599999999999988553
No 236
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=71.60 E-value=1.8 Score=30.25 Aligned_cols=19 Identities=16% Similarity=-0.013 Sum_probs=14.4
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.++||+|||.+.-+.+...
T Consensus 64 ~a~TGsGKT~~~~~~~~~~ 82 (400)
T 1s2m_A 64 RAKNGTGKTAAFVIPTLEK 82 (400)
T ss_dssp ECCTTSCHHHHHHHHHHHH
T ss_pred ECCCCcHHHHHHHHHHHHH
Confidence 5789999998876665543
No 237
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=71.57 E-value=2 Score=28.11 Aligned_cols=20 Identities=10% Similarity=-0.044 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|..|||||-..+.+..+|
T Consensus 9 l~G~~GsGKsT~a~~La~~l 28 (220)
T 1aky_A 9 LIGPPGAGKGTQAPNLQERF 28 (220)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHc
Confidence 35899999999999887765
No 238
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=71.54 E-value=1.9 Score=29.12 Aligned_cols=20 Identities=15% Similarity=0.016 Sum_probs=16.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|||||-.++.+...+
T Consensus 34 l~G~~GsGKsT~a~~L~~~~ 53 (243)
T 3tlx_A 34 FLGAPGSGKGTQSLNLKKSH 53 (243)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35999999999999987754
No 239
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=71.52 E-value=1.9 Score=30.14 Aligned_cols=19 Identities=16% Similarity=0.079 Sum_probs=13.9
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.++||+|||.+.-+.+..
T Consensus 82 v~a~TGsGKT~~~~~~~~~ 100 (414)
T 3eiq_A 82 AQAQSGTGKTATFAISILQ 100 (414)
T ss_dssp ECCCSCSSSHHHHHHHHHH
T ss_pred EECCCCCcccHHHHHHHHH
Confidence 3689999999885554443
No 240
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=71.51 E-value=1.9 Score=29.94 Aligned_cols=17 Identities=24% Similarity=0.305 Sum_probs=14.7
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|++|||||-.-+++.-
T Consensus 38 iG~nGsGKSTLlk~l~G 54 (262)
T 1b0u_A 38 IGSSGSGKSTFLRCINF 54 (262)
T ss_dssp ECCTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHhc
Confidence 59999999999998754
No 241
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=71.48 E-value=1.9 Score=31.80 Aligned_cols=22 Identities=18% Similarity=-0.014 Sum_probs=18.2
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|.|++|+|||-+.+.+..++..
T Consensus 162 lvG~nGsGKTTll~~Lag~l~~ 183 (359)
T 2og2_A 162 IVGVNGGGKTTSLGKLAHRLKN 183 (359)
T ss_dssp EECCTTSCHHHHHHHHHHHHHH
T ss_pred EEcCCCChHHHHHHHHHhhccc
Confidence 3599999999999988877643
No 242
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=71.44 E-value=1.4 Score=30.02 Aligned_cols=19 Identities=16% Similarity=0.128 Sum_probs=15.8
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+-|++|||||-.-+++.-.
T Consensus 33 i~G~nGsGKSTLl~~l~Gl 51 (243)
T 1mv5_A 33 FAGPSGGGKSTIFSLLERF 51 (243)
T ss_dssp EECCTTSSHHHHHHHHTTS
T ss_pred EECCCCCCHHHHHHHHhcC
Confidence 3599999999999988553
No 243
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=71.27 E-value=1.9 Score=32.85 Aligned_cols=23 Identities=22% Similarity=0.138 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
++++||+|||.+.-+++...+..
T Consensus 33 v~~~TGsGKTl~~~~~i~~~l~~ 55 (696)
T 2ykg_A 33 ICAPTGCGKTFVSLLICEHHLKK 55 (696)
T ss_dssp EECCTTSSHHHHHHHHHHHHHHH
T ss_pred EEcCCCchHHHHHHHHHHHHHHh
Confidence 36899999999888777655443
No 244
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=71.26 E-value=1.9 Score=30.39 Aligned_cols=18 Identities=11% Similarity=-0.075 Sum_probs=15.2
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+-|++|||||-.-+++.-
T Consensus 39 iiGpnGsGKSTLl~~l~G 56 (275)
T 3gfo_A 39 ILGGNGVGKSTLFQNFNG 56 (275)
T ss_dssp EECCTTSSHHHHHHHHTT
T ss_pred EECCCCCCHHHHHHHHHc
Confidence 359999999999998854
No 245
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=71.25 E-value=2 Score=30.36 Aligned_cols=22 Identities=23% Similarity=0.173 Sum_probs=17.9
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
++|.+|.|||.....+..+++.
T Consensus 73 i~G~pG~GKTtl~l~ia~~~a~ 94 (315)
T 3bh0_A 73 IAARPSMGKTAFALKQAKNMSD 94 (315)
T ss_dssp EECCTTSSHHHHHHHHHHHHHT
T ss_pred EEeCCCCCHHHHHHHHHHHHHH
Confidence 5899999999988877766553
No 246
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=71.22 E-value=1.7 Score=29.74 Aligned_cols=20 Identities=5% Similarity=-0.207 Sum_probs=16.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|..|+|||.+.+.+...|
T Consensus 19 i~g~~gsGk~~i~~~la~~l 38 (223)
T 3hdt_A 19 IEREYGSGGRIVGKKLAEEL 38 (223)
T ss_dssp EEECTTSCHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHc
Confidence 46899999999999887654
No 247
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=71.19 E-value=2.1 Score=29.57 Aligned_cols=19 Identities=16% Similarity=-0.015 Sum_probs=16.7
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|++|.|||.+.+.+.+.+
T Consensus 54 ~G~~G~GKT~la~~la~~l 72 (324)
T 3u61_B 54 SPSPGTGKTTVAKALCHDV 72 (324)
T ss_dssp CSSTTSSHHHHHHHHHHHT
T ss_pred eCcCCCCHHHHHHHHHHHh
Confidence 5899999999999987765
No 248
>2zj8_A DNA helicase, putative SKI2-type helicase; RECA fold, ATP-binding, hydrolase, nucleotide- binding; 2.00A {Pyrococcus furiosus} PDB: 2zj5_A* 2zj2_A 2zja_A*
Probab=71.14 E-value=1.7 Score=33.81 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=15.1
Q ss_pred CCCCcCCchHHHHHH-HHHHHh
Q psy17057 1 MAGSTMRDKTPFKLV-VLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~-~l~~l~ 21 (80)
+.++||+|||.+.-+ ++..+.
T Consensus 44 v~apTGsGKT~~~~l~il~~~~ 65 (720)
T 2zj8_A 44 ISIPTASGKTLIAEIAMVHRIL 65 (720)
T ss_dssp EECCGGGCHHHHHHHHHHHHHH
T ss_pred EEcCCccHHHHHHHHHHHHHHH
Confidence 368999999998844 444444
No 249
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=71.10 E-value=1.7 Score=31.05 Aligned_cols=19 Identities=16% Similarity=-0.022 Sum_probs=16.5
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++.+...+
T Consensus 123 ~GppGtGKT~la~aia~~~ 141 (357)
T 3d8b_A 123 FGPPGTGKTLIGKCIASQS 141 (357)
T ss_dssp ESSTTSSHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHc
Confidence 5999999999999887754
No 250
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=70.74 E-value=1.5 Score=30.97 Aligned_cols=20 Identities=15% Similarity=0.047 Sum_probs=16.7
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
++|++|+|||.....+....
T Consensus 112 i~G~~GsGKT~la~~la~~~ 131 (324)
T 2z43_A 112 FFGEFGSGKTQLCHQLSVNV 131 (324)
T ss_dssp EEESTTSSHHHHHHHHHHHT
T ss_pred EECCCCCCHhHHHHHHHHHH
Confidence 47999999999998877654
No 251
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=70.65 E-value=1.8 Score=29.15 Aligned_cols=18 Identities=17% Similarity=0.137 Sum_probs=15.7
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|||||-.-+++.-.
T Consensus 28 iG~nGsGKSTLl~~l~Gl 45 (208)
T 3b85_A 28 LGPAGSGKTYLAMAKAVQ 45 (208)
T ss_dssp ECCTTSSTTHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHhcC
Confidence 599999999999988664
No 252
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=70.54 E-value=2.4 Score=29.93 Aligned_cols=19 Identities=16% Similarity=0.006 Sum_probs=16.9
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++.+...+
T Consensus 51 ~GppGtGKT~la~ala~~~ 69 (322)
T 1xwi_A 51 FGPPGTGKSYLAKAVATEA 69 (322)
T ss_dssp ESSSSSCHHHHHHHHHHHT
T ss_pred ECCCCccHHHHHHHHHHHc
Confidence 5999999999999988765
No 253
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=70.49 E-value=2 Score=29.74 Aligned_cols=19 Identities=16% Similarity=0.053 Sum_probs=14.5
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
..+||+|||.+.-+.+...
T Consensus 51 ~a~TGsGKT~~~~~~~~~~ 69 (391)
T 1xti_A 51 QAKSGMGKTAVFVLATLQQ 69 (391)
T ss_dssp ECSSCSSHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHh
Confidence 5789999998876665544
No 254
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii}
Probab=70.41 E-value=2 Score=29.00 Aligned_cols=17 Identities=24% Similarity=0.147 Sum_probs=12.9
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
.++||+|||.+.-+.+.
T Consensus 37 ~~~TGsGKT~~~~~~~~ 53 (337)
T 2z0m_A 37 RAKTGSGKTAAYAIPIL 53 (337)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred EcCCCCcHHHHHHHHHH
Confidence 57899999987655543
No 255
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=70.34 E-value=2.7 Score=30.09 Aligned_cols=19 Identities=16% Similarity=0.008 Sum_probs=16.8
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++.+...+
T Consensus 90 ~GppGtGKT~la~ala~~~ 108 (355)
T 2qp9_X 90 YGPPGTGKSYLAKAVATEA 108 (355)
T ss_dssp ECSTTSCHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHh
Confidence 5999999999999888765
No 256
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=70.29 E-value=2.1 Score=29.18 Aligned_cols=17 Identities=18% Similarity=0.010 Sum_probs=14.7
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|++|||||-.-+++.-
T Consensus 38 ~G~nGsGKSTLl~~l~G 54 (240)
T 1ji0_A 38 IGANGAGKTTTLSAIAG 54 (240)
T ss_dssp ECSTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHhC
Confidence 59999999999998754
No 257
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=70.22 E-value=1.8 Score=29.99 Aligned_cols=19 Identities=16% Similarity=0.181 Sum_probs=16.2
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|||||-.-+++.-.+
T Consensus 52 ~G~nGsGKSTLl~~l~Gl~ 70 (260)
T 2ghi_A 52 VGHTGSGKSTIAKLLYRFY 70 (260)
T ss_dssp ECSTTSSHHHHHHHHTTSS
T ss_pred ECCCCCCHHHHHHHHhccC
Confidence 5999999999999986643
No 258
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=70.17 E-value=2.6 Score=31.87 Aligned_cols=23 Identities=13% Similarity=0.026 Sum_probs=18.9
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
++|.+|+|||-+..-+..+|...
T Consensus 102 lvG~~GsGKTTt~~kLA~~l~~~ 124 (433)
T 3kl4_A 102 LVGVQGSGKTTTAGKLAYFYKKR 124 (433)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHHc
Confidence 47999999999988888777543
No 259
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=69.80 E-value=1.4 Score=30.78 Aligned_cols=19 Identities=11% Similarity=0.193 Sum_probs=15.7
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
|-|++|||||-.-+++.-.
T Consensus 50 i~G~nGsGKSTLlk~l~Gl 68 (271)
T 2ixe_A 50 LVGPNGSGKSTVAALLQNL 68 (271)
T ss_dssp EECSTTSSHHHHHHHHTTS
T ss_pred EECCCCCCHHHHHHHHhcC
Confidence 3599999999999988553
No 260
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=69.62 E-value=2.3 Score=28.18 Aligned_cols=20 Identities=15% Similarity=-0.047 Sum_probs=17.0
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+..+|
T Consensus 5 l~G~~GsGKsT~a~~La~~l 24 (223)
T 2xb4_A 5 IFGPNGSGKGTQGNLVKDKY 24 (223)
T ss_dssp EECCTTSCHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35999999999999887765
No 261
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=69.51 E-value=1.8 Score=31.47 Aligned_cols=22 Identities=14% Similarity=0.054 Sum_probs=19.3
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|++|.|||-+.+.+++-|-.
T Consensus 50 i~GpPGTGKT~~v~~v~~~L~~ 71 (318)
T 3te6_A 50 ITNADDSTKFQLVNDVMDELIT 71 (318)
T ss_dssp EECCCSHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 3699999999999999998854
No 262
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=69.50 E-value=3.4 Score=28.97 Aligned_cols=22 Identities=14% Similarity=0.027 Sum_probs=18.6
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|-|+.|.|||.+.+.+...+..
T Consensus 57 i~G~~G~GKT~L~~~~~~~~~~ 78 (412)
T 1w5s_A 57 SIGRVGIGKTTLAKFTVKRVSE 78 (412)
T ss_dssp CTTCCSSSHHHHHHHHHHHHHH
T ss_pred CcCcCCCCHHHHHHHHHHHHHH
Confidence 4799999999999998887644
No 263
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=69.39 E-value=2.2 Score=29.79 Aligned_cols=18 Identities=22% Similarity=0.301 Sum_probs=15.2
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|||||-.-+++.-.
T Consensus 56 iG~NGsGKSTLlk~l~Gl 73 (263)
T 2olj_A 56 IGPSGSGKSTFLRCLNLL 73 (263)
T ss_dssp ECCTTSSHHHHHHHHTTS
T ss_pred EcCCCCcHHHHHHHHHcC
Confidence 599999999999987543
No 264
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=69.39 E-value=2.3 Score=28.86 Aligned_cols=18 Identities=17% Similarity=0.060 Sum_probs=15.2
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|||||-.-+++.-.
T Consensus 41 iG~NGsGKSTLlk~l~Gl 58 (214)
T 1sgw_A 41 HGPNGIGKTTLLKTISTY 58 (214)
T ss_dssp ECCTTSSHHHHHHHHTTS
T ss_pred ECCCCCCHHHHHHHHhcC
Confidence 599999999999987543
No 265
>3dmq_A RNA polymerase-associated protein RAPA; SWF2/SNF2, transcription factor, RNA polymerase recycling, activator, ATP-binding, DNA-binding; 3.20A {Escherichia coli K12}
Probab=69.08 E-value=2.8 Score=34.33 Aligned_cols=24 Identities=21% Similarity=0.008 Sum_probs=19.9
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhc
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~ 24 (80)
+|+++|.|||.++-.++..+....
T Consensus 175 Lad~tGlGKTi~Ai~~i~~l~~~g 198 (968)
T 3dmq_A 175 LADEVGLGKTIEAGMILHQQLLSG 198 (968)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHHTS
T ss_pred EECCCCCcHHHHHHHHHHHHHHhC
Confidence 478999999999998888776543
No 266
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 3.19A {Homo sapiens}
Probab=69.04 E-value=1.9 Score=31.47 Aligned_cols=17 Identities=18% Similarity=0.182 Sum_probs=13.1
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
.++||+|||++.-+.+.
T Consensus 137 ~a~TGsGKT~~~~l~il 153 (479)
T 3fmp_B 137 QSQSGTGKTAAFVLAML 153 (479)
T ss_dssp ECCSSSSHHHHHHHHHH
T ss_pred EcCCCCchhHHHHHHHH
Confidence 57999999998655443
No 267
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=68.47 E-value=2.5 Score=28.05 Aligned_cols=19 Identities=11% Similarity=-0.078 Sum_probs=16.7
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|..|+|||-..+.+..+|
T Consensus 22 ~G~~GsGKsT~a~~La~~l 40 (233)
T 1ak2_A 22 LGPPGAGKGTQAPKLAKNF 40 (233)
T ss_dssp ECCTTSSHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 5899999999999988765
No 268
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=68.30 E-value=2.4 Score=29.55 Aligned_cols=17 Identities=18% Similarity=0.182 Sum_probs=13.0
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
.++||+|||.+.-+.+.
T Consensus 70 ~apTGsGKT~~~~~~~~ 86 (412)
T 3fht_A 70 QSQSGTGKTAAFVLAML 86 (412)
T ss_dssp ECCTTSCHHHHHHHHHH
T ss_pred ECCCCchHHHHHHHHHH
Confidence 47899999998755443
No 269
>3fe2_A Probable ATP-dependent RNA helicase DDX5; DEAD, ADP, ATP-binding, hydrolase, nucleotide- RNA-binding, methylation, mRNA processing, mRNA S nucleus; HET: ADP; 2.60A {Homo sapiens} PDB: 4a4d_A
Probab=68.30 E-value=2.2 Score=28.29 Aligned_cols=18 Identities=28% Similarity=0.135 Sum_probs=13.3
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
.++||+|||.+.-+.+..
T Consensus 72 ~apTGsGKT~~~~l~~l~ 89 (242)
T 3fe2_A 72 VAQTGSGKTLSYLLPAIV 89 (242)
T ss_dssp EECTTSCHHHHHHHHHHH
T ss_pred ECCCcCHHHHHHHHHHHH
Confidence 368999999996655443
No 270
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B*
Probab=68.25 E-value=1.1 Score=32.23 Aligned_cols=16 Identities=19% Similarity=0.187 Sum_probs=12.5
Q ss_pred CCCCcCCchHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVV 16 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~ 16 (80)
|.|++|||||-+---|
T Consensus 30 i~G~NGaGKT~ileAI 45 (371)
T 3auy_A 30 IIGENGSGKSSIFEAV 45 (371)
T ss_dssp EEECTTSSHHHHHHHH
T ss_pred EECCCCCCHHHHHHHH
Confidence 4699999999885533
No 271
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=68.20 E-value=1.7 Score=27.73 Aligned_cols=20 Identities=15% Similarity=0.177 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|..|||||-..+.+...|
T Consensus 9 l~G~~GsGKsT~~~~L~~~l 28 (204)
T 2v54_A 9 FEGLDKSGKTTQCMNIMESI 28 (204)
T ss_dssp EECCTTSSHHHHHHHHHHTS
T ss_pred EEcCCCCCHHHHHHHHHHHH
Confidence 35899999999999998875
No 272
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=68.09 E-value=2.5 Score=31.33 Aligned_cols=22 Identities=23% Similarity=0.212 Sum_probs=19.0
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
++|.+|+|||-....+...++.
T Consensus 208 I~G~pG~GKTtl~l~ia~~~~~ 229 (454)
T 2r6a_A 208 VAARPSVGKTAFALNIAQNVAT 229 (454)
T ss_dssp EECCTTSCHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 5899999999999988887764
No 273
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=68.07 E-value=2.5 Score=29.32 Aligned_cols=17 Identities=29% Similarity=0.253 Sum_probs=14.7
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|++|||||-.-+++.-
T Consensus 39 iG~nGsGKSTLl~~i~G 55 (266)
T 2yz2_A 39 AGNTGSGKSTLLQIVAG 55 (266)
T ss_dssp ECSTTSSHHHHHHHHTT
T ss_pred ECCCCCcHHHHHHHHhC
Confidence 59999999999998754
No 274
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=68.01 E-value=2.1 Score=32.32 Aligned_cols=21 Identities=19% Similarity=0.007 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|++|+|||...+.++..+.
T Consensus 286 i~G~~GsGKSTLl~~l~g~~~ 306 (525)
T 1tf7_A 286 ATGATGTGKTLLVSRFVENAC 306 (525)
T ss_dssp EEECTTSSHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHH
Confidence 479999999999998876554
No 275
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=67.96 E-value=2.1 Score=32.23 Aligned_cols=20 Identities=25% Similarity=0.129 Sum_probs=17.4
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|.|||.+++.+.+.+
T Consensus 82 L~GppGtGKTtla~~la~~l 101 (516)
T 1sxj_A 82 LYGPPGIGKTTAAHLVAQEL 101 (516)
T ss_dssp EECSTTSSHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHc
Confidence 35999999999999998765
No 276
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=67.86 E-value=2.5 Score=29.35 Aligned_cols=17 Identities=18% Similarity=0.096 Sum_probs=14.7
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|++|||||-.-+++.-
T Consensus 47 ~G~NGsGKSTLlk~l~G 63 (256)
T 1vpl_A 47 IGPNGAGKTTTLRIIST 63 (256)
T ss_dssp ECCTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHhc
Confidence 59999999999998754
No 277
>4f92_B U5 small nuclear ribonucleoprotein 200 kDa helica; RNP remodeling, PRE-mRNA splicing, spliceosome catalytic ACT DEXD/H-box RNA helicase; HET: SAN; 2.66A {Homo sapiens} PDB: 4f93_B* 4f91_B
Probab=67.83 E-value=5.4 Score=34.98 Aligned_cols=51 Identities=14% Similarity=0.163 Sum_probs=28.2
Q ss_pred CCCcCCchHHHHHHHHHHHhhhccCCcccCccchhhHHHHHHHHHHHHhcC
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHEDFGLLNRDTKFFDMFSTVIVSAWFQAFGN 52 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~~~~~~~~~~~~~~~l~~~i~~sileafGn 52 (80)
+.+||+|||.+.-+.+...+...++..--=-.|...+..++...+-+.|+.
T Consensus 948 ~APTGSGKTliaelail~~l~~~~~~kavyi~P~raLa~q~~~~~~~~f~~ 998 (1724)
T 4f92_B 948 GAPTGSGKTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYEKFQD 998 (1724)
T ss_dssp ECCTTSCCHHHHHHHHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHHHHTT
T ss_pred EeCCCCCchHHHHHHHHHHHHhCCCCEEEEEcChHHHHHHHHHHHHHHhch
Confidence 578999999999887765544332210000112344444444446666664
No 278
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=67.76 E-value=2.5 Score=27.76 Aligned_cols=19 Identities=21% Similarity=0.032 Sum_probs=13.3
Q ss_pred CCCcCCchHHHHHHH-HHHH
Q psy17057 2 AGSTMRDKTPFKLVV-LLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~-l~~l 20 (80)
..+||+|||.+.-+. +..+
T Consensus 67 ~a~TGsGKT~~~~l~~l~~l 86 (230)
T 2oxc_A 67 QAKSGTGKTCVFSTIALDSL 86 (230)
T ss_dssp ECCTTSSHHHHHHHHHHHHC
T ss_pred ECCCCCcHHHHHHHHHHHHH
Confidence 468999999985544 3443
No 279
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=67.54 E-value=2.5 Score=29.68 Aligned_cols=18 Identities=17% Similarity=0.023 Sum_probs=15.2
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|||||-.-+++.-.
T Consensus 53 iG~NGsGKSTLlk~l~Gl 70 (279)
T 2ihy_A 53 YGLNGAGKTTLLNILNAY 70 (279)
T ss_dssp ECCTTSSHHHHHHHHTTS
T ss_pred ECCCCCcHHHHHHHHhCC
Confidence 599999999999987543
No 280
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=67.32 E-value=1.7 Score=33.52 Aligned_cols=20 Identities=15% Similarity=0.175 Sum_probs=17.3
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|+|||.+.+.+...+
T Consensus 65 l~Gp~GtGKTtlar~ia~~l 84 (604)
T 3k1j_A 65 LIGEPGTGKSMLGQAMAELL 84 (604)
T ss_dssp EECCTTSSHHHHHHHHHHTS
T ss_pred EEeCCCCCHHHHHHHHhccC
Confidence 35999999999999997755
No 281
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=67.26 E-value=2.7 Score=29.04 Aligned_cols=18 Identities=17% Similarity=0.141 Sum_probs=15.2
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|||||-.-+++.-.
T Consensus 37 ~G~nGsGKSTLl~~l~Gl 54 (253)
T 2nq2_C 37 LGQNGCGKSTLLDLLLGI 54 (253)
T ss_dssp ECCSSSSHHHHHHHHTTS
T ss_pred ECCCCCCHHHHHHHHhCC
Confidence 599999999999988553
No 282
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=67.25 E-value=1.9 Score=33.24 Aligned_cols=18 Identities=22% Similarity=0.288 Sum_probs=15.4
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
|.|++|||||..-+++.-
T Consensus 299 i~G~nGsGKSTLl~~l~G 316 (538)
T 3ozx_A 299 ILGPNGIGKTTFARILVG 316 (538)
T ss_dssp EECCTTSSHHHHHHHHTT
T ss_pred EECCCCCCHHHHHHHHhC
Confidence 469999999999998854
No 283
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=67.22 E-value=1.6 Score=32.31 Aligned_cols=21 Identities=10% Similarity=-0.116 Sum_probs=15.2
Q ss_pred CCCCcCCchHHH-HHHHHHHHh
Q psy17057 1 MAGSTMRDKTPF-KLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~-~k~~l~~l~ 21 (80)
+.++||+|||.+ .-.++..+.
T Consensus 26 v~a~TGsGKT~~~~l~il~~~~ 47 (459)
T 2z83_A 26 LDLHPGSGKTRKILPQIIKDAI 47 (459)
T ss_dssp ECCCTTSCTTTTHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 368999999998 455555554
No 284
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=67.11 E-value=2.3 Score=30.52 Aligned_cols=20 Identities=20% Similarity=0.076 Sum_probs=16.7
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|.|||-+++.+...+
T Consensus 153 L~GppGtGKT~la~aia~~~ 172 (389)
T 3vfd_A 153 LFGPPGNGKTMLAKAVAAES 172 (389)
T ss_dssp EESSTTSCHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHhh
Confidence 35999999999999886653
No 285
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=66.91 E-value=2.8 Score=31.28 Aligned_cols=18 Identities=11% Similarity=0.121 Sum_probs=15.4
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|+||||||-+-++|.-.
T Consensus 35 lGpsGsGKSTLLr~iaGl 52 (381)
T 3rlf_A 35 VGPSGCGKSTLLRMIAGL 52 (381)
T ss_dssp ECCTTSSHHHHHHHHHTS
T ss_pred EcCCCchHHHHHHHHHcC
Confidence 499999999999988653
No 286
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=66.61 E-value=2.7 Score=29.02 Aligned_cols=18 Identities=11% Similarity=0.052 Sum_probs=15.2
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|||||-.-+++.-.
T Consensus 32 iG~NGsGKSTLlk~l~Gl 49 (249)
T 2qi9_C 32 VGPNGAGKSTLLARMAGM 49 (249)
T ss_dssp ECCTTSSHHHHHHHHTTS
T ss_pred ECCCCCcHHHHHHHHhCC
Confidence 599999999999987543
No 287
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=66.59 E-value=2.4 Score=28.88 Aligned_cols=19 Identities=11% Similarity=0.102 Sum_probs=16.3
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
|.|.+|+|||-..+.+...
T Consensus 7 l~G~~GsGKST~a~~L~~~ 25 (301)
T 1ltq_A 7 TIGCPGSGKSTWAREFIAK 25 (301)
T ss_dssp EECCTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHh
Confidence 4699999999999988764
No 288
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=66.53 E-value=2.6 Score=29.78 Aligned_cols=23 Identities=9% Similarity=-0.002 Sum_probs=20.1
Q ss_pred CCCcCCchHHHHHHHHHHHhhhc
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~~ 24 (80)
.|+.|.|||.+++.+.+.|.+..
T Consensus 30 ~G~~G~GKt~~a~~la~~l~~~~ 52 (334)
T 1a5t_A 30 QALPGMGDDALIYALSRYLLCQQ 52 (334)
T ss_dssp ECCTTSCHHHHHHHHHHHHTCSS
T ss_pred ECCCCchHHHHHHHHHHHHhCCC
Confidence 59999999999999999987543
No 289
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=66.43 E-value=2.6 Score=30.17 Aligned_cols=19 Identities=16% Similarity=0.135 Sum_probs=16.0
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
++|++|+|||.....+...
T Consensus 127 I~G~~GsGKTtla~~la~~ 145 (343)
T 1v5w_A 127 AFGEFRTGKTQLSHTLCVT 145 (343)
T ss_dssp EECCTTCTHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHH
Confidence 5799999999998877664
No 290
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=66.20 E-value=3.2 Score=29.77 Aligned_cols=23 Identities=13% Similarity=-0.054 Sum_probs=18.4
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
|.|.+|+|||-+...+..++...
T Consensus 110 ivG~~G~GKTT~~~~LA~~l~~~ 132 (320)
T 1zu4_A 110 LVGVNGTGKTTSLAKMANYYAEL 132 (320)
T ss_dssp EESSTTSSHHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHHC
Confidence 46899999999988887777543
No 291
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=66.16 E-value=2.2 Score=32.73 Aligned_cols=18 Identities=22% Similarity=0.207 Sum_probs=15.7
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|++|||||..-+.+.-
T Consensus 317 i~G~NGsGKSTLlk~l~G 334 (538)
T 1yqt_A 317 IVGPNGIGKTTFVKMLAG 334 (538)
T ss_dssp EECCTTSSHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHhC
Confidence 469999999999998865
No 292
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=66.08 E-value=3.2 Score=31.11 Aligned_cols=19 Identities=21% Similarity=0.095 Sum_probs=16.8
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||.+++.+.+.+
T Consensus 56 ~GppGtGKTtlAr~ia~~~ 74 (447)
T 3pvs_A 56 WGPPGTGKTTLAEVIARYA 74 (447)
T ss_dssp ECSTTSSHHHHHHHHHHHT
T ss_pred ECCCCCcHHHHHHHHHHHh
Confidence 4999999999999987765
No 293
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=66.06 E-value=2.8 Score=31.01 Aligned_cols=20 Identities=30% Similarity=0.381 Sum_probs=17.5
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|++|.|||-+++.+.+.+
T Consensus 68 l~GppGtGKT~la~ala~~l 87 (456)
T 2c9o_A 68 LAGPPGTGKTALALAIAQEL 87 (456)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCcCCHHHHHHHHHHHh
Confidence 35999999999999988876
No 294
>4a2q_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.40A {Anas platyrhynchos}
Probab=65.99 E-value=2.8 Score=33.09 Aligned_cols=24 Identities=13% Similarity=0.079 Sum_probs=18.6
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhc
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~ 24 (80)
++.+||+|||.+.-+.+.+++...
T Consensus 268 l~~~TGsGKTl~~~~~i~~~l~~~ 291 (797)
T 4a2q_A 268 ICAPTGSGKTFVSILICEHHFQNM 291 (797)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHTC
T ss_pred EEeCCCChHHHHHHHHHHHHHHhc
Confidence 367999999999888877665543
No 295
>2va8_A SSO2462, SKI2-type helicase; hydrolase, DNA repair, ATP-bindin nucleotide-binding; 2.30A {Sulfolobus solfataricus}
Probab=65.98 E-value=2.8 Score=32.38 Aligned_cols=18 Identities=17% Similarity=0.154 Sum_probs=14.1
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.++||+|||.+.-+.+.
T Consensus 51 v~apTGsGKT~~~~l~il 68 (715)
T 2va8_A 51 LTSPTGSGKTLIAEMGII 68 (715)
T ss_dssp EECCTTSCHHHHHHHHHH
T ss_pred EEcCCCCcHHHHHHHHHH
Confidence 368999999999855543
No 296
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=65.94 E-value=1.9 Score=30.51 Aligned_cols=19 Identities=21% Similarity=0.100 Sum_probs=16.0
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.|.+|||||-.-+.++..
T Consensus 9 i~G~~GaGKTTll~~l~~~ 27 (318)
T 1nij_A 9 LTGFLGAGKTTLLRHILNE 27 (318)
T ss_dssp EEESSSSSCHHHHHHHHHS
T ss_pred EEecCCCCHHHHHHHHHhh
Confidence 4699999999998888764
No 297
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=65.93 E-value=3.8 Score=30.37 Aligned_cols=22 Identities=14% Similarity=0.024 Sum_probs=19.0
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
-|++|.|||-+.+.+..++...
T Consensus 136 ~Gp~G~GKTtLa~aia~~l~~~ 157 (440)
T 2z4s_A 136 YGGVGLGKTHLLQSIGNYVVQN 157 (440)
T ss_dssp ECSSSSSHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHh
Confidence 5999999999999998887554
No 298
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=65.70 E-value=3 Score=30.94 Aligned_cols=17 Identities=24% Similarity=0.223 Sum_probs=14.6
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|+||||||-.-+++.-
T Consensus 60 iGpnGaGKSTLlr~i~G 76 (366)
T 3tui_C 60 IGASGAGKSTLIRCVNL 76 (366)
T ss_dssp ECCTTSSHHHHHHHHHT
T ss_pred EcCCCchHHHHHHHHhc
Confidence 59999999999888755
No 299
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=65.66 E-value=2.7 Score=29.06 Aligned_cols=17 Identities=18% Similarity=0.020 Sum_probs=12.7
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
.++||+|||.+.-+.+.
T Consensus 64 ~~~TGsGKT~~~~~~~~ 80 (394)
T 1fuu_A 64 QAQSGTGKTGTFSIAAL 80 (394)
T ss_dssp CCCSSHHHHHHHHHHHH
T ss_pred ECCCCChHHHHHHHHHH
Confidence 57999999988554443
No 300
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=65.55 E-value=2.4 Score=29.60 Aligned_cols=19 Identities=21% Similarity=0.048 Sum_probs=15.9
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
++|++|+|||.....+...
T Consensus 103 i~G~~gsGKT~la~~la~~ 121 (322)
T 2i1q_A 103 FAGVFGSGKTQIMHQSCVN 121 (322)
T ss_dssp EEESTTSSHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHH
Confidence 5799999999998877654
No 301
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=65.49 E-value=2.7 Score=29.08 Aligned_cols=19 Identities=16% Similarity=-0.052 Sum_probs=16.3
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||.+.+.+...+
T Consensus 52 ~G~pGtGKT~la~~la~~~ 70 (331)
T 2r44_A 52 EGVPGLAKTLSVNTLAKTM 70 (331)
T ss_dssp ESCCCHHHHHHHHHHHHHT
T ss_pred ECCCCCcHHHHHHHHHHHh
Confidence 5999999999999887654
No 302
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=65.47 E-value=2.5 Score=29.70 Aligned_cols=19 Identities=16% Similarity=0.030 Sum_probs=14.4
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.++||+|||.+.-+.+...
T Consensus 80 ~a~TGsGKT~~~~~~~~~~ 98 (410)
T 2j0s_A 80 QSQSGTGKTATFSISVLQC 98 (410)
T ss_dssp ECCTTSSHHHHHHHHHHHT
T ss_pred ECCCCCCchHHHHHHHHHH
Confidence 5789999998877655543
No 303
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=65.41 E-value=1.9 Score=29.95 Aligned_cols=18 Identities=11% Similarity=0.076 Sum_probs=15.2
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+|||||-.++.+..
T Consensus 80 I~G~~GSGKSTva~~La~ 97 (281)
T 2f6r_A 80 LTGISGSGKSSVAQRLKN 97 (281)
T ss_dssp EEECTTSCHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 479999999999988754
No 304
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=65.33 E-value=2.3 Score=33.34 Aligned_cols=18 Identities=22% Similarity=0.167 Sum_probs=15.4
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
|.|++|||||..-+++.-
T Consensus 383 iiG~NGsGKSTLlk~l~G 400 (608)
T 3j16_B 383 MMGENGTGKTTLIKLLAG 400 (608)
T ss_dssp EESCTTSSHHHHHHHHHT
T ss_pred EECCCCCcHHHHHHHHhc
Confidence 469999999999998854
No 305
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, binding, hydrolase, membrane, mRNA transport; 2.80A {Schizosaccharomyces pombe}
Probab=65.29 E-value=2.6 Score=31.48 Aligned_cols=19 Identities=16% Similarity=0.053 Sum_probs=14.1
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.++||+|||++.-+.+...
T Consensus 164 ~apTGsGKT~~~~~~il~~ 182 (508)
T 3fho_A 164 QSQSGTGKTAAFALTMLSR 182 (508)
T ss_dssp ECCSSTTSHHHHHHHHHHH
T ss_pred ECCCCccHHHHHHHHHHHH
Confidence 5789999999866554443
No 306
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=65.13 E-value=3.3 Score=28.45 Aligned_cols=19 Identities=16% Similarity=0.167 Sum_probs=15.7
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|++|||||-+-+.|.-.+
T Consensus 33 ~GpnGsGKSTll~~i~g~~ 51 (227)
T 1qhl_A 33 SGGNGAGKSTTMAAFVTAL 51 (227)
T ss_dssp HSCCSHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHhccc
Confidence 5999999999998876544
No 307
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=64.98 E-value=3.1 Score=31.37 Aligned_cols=23 Identities=17% Similarity=0.079 Sum_probs=18.9
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
++|++|+|||-+...+..++...
T Consensus 103 i~G~~GsGKTT~~~~LA~~l~~~ 125 (425)
T 2ffh_A 103 LVGLQGSGKTTTAAKLALYYKGK 125 (425)
T ss_dssp EECCTTSSHHHHHHHHHHHHHTT
T ss_pred EECCCCCCHHHHHHHHHHHHHHc
Confidence 46999999999998888877543
No 308
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=64.94 E-value=3.5 Score=29.05 Aligned_cols=21 Identities=19% Similarity=0.023 Sum_probs=17.7
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
.|++|+|||-+...+..++..
T Consensus 104 ~g~~G~GKTT~~~~la~~~~~ 124 (295)
T 1ls1_A 104 VGLQGSGKTTTAAKLALYYKG 124 (295)
T ss_dssp ECCTTTTHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHH
Confidence 589999999998888877654
No 309
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=64.83 E-value=2.8 Score=30.99 Aligned_cols=18 Identities=17% Similarity=0.050 Sum_probs=15.3
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|+||||||-+-++|.-.
T Consensus 36 lGpsGsGKSTLLr~iaGl 53 (359)
T 3fvq_A 36 IGASGCGKTTLLRCLAGF 53 (359)
T ss_dssp EESTTSSHHHHHHHHHTS
T ss_pred ECCCCchHHHHHHHHhcC
Confidence 499999999999988653
No 310
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=64.02 E-value=2.9 Score=30.32 Aligned_cols=22 Identities=18% Similarity=0.125 Sum_probs=17.9
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|+|++|+|||-....++..++.
T Consensus 66 I~G~pGsGKTtLal~la~~~~~ 87 (349)
T 2zr9_A 66 IYGPESSGKTTVALHAVANAQA 87 (349)
T ss_dssp EEESTTSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHh
Confidence 4799999999998888766543
No 311
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=64.00 E-value=3.3 Score=28.90 Aligned_cols=18 Identities=17% Similarity=0.089 Sum_probs=15.4
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|||||-.-+++.-.
T Consensus 36 ~G~NGsGKSTLlk~l~Gl 53 (263)
T 2pjz_A 36 LGPNGSGKTTLLRAISGL 53 (263)
T ss_dssp ECCTTSSHHHHHHHHTTS
T ss_pred ECCCCCCHHHHHHHHhCC
Confidence 599999999999988654
No 312
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=63.96 E-value=3.2 Score=32.33 Aligned_cols=22 Identities=18% Similarity=-0.031 Sum_probs=18.2
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|.|.+|+|||-+.+.+..++..
T Consensus 298 LVGpNGSGKTTLl~~LAgll~~ 319 (503)
T 2yhs_A 298 MVGVNGVGKTTTIGKLARQFEQ 319 (503)
T ss_dssp EECCTTSSHHHHHHHHHHHHHH
T ss_pred EECCCcccHHHHHHHHHHHhhh
Confidence 4599999999999988877643
No 313
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=63.95 E-value=3.5 Score=30.34 Aligned_cols=18 Identities=17% Similarity=0.137 Sum_probs=15.3
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|+||+|||-.-++|.-.
T Consensus 47 lGpnGsGKSTLLr~iaGl 64 (355)
T 1z47_A 47 LGPSGSGKTTILRLIAGL 64 (355)
T ss_dssp ECSTTSSHHHHHHHHHTS
T ss_pred ECCCCCcHHHHHHHHhCC
Confidence 499999999999988543
No 314
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=63.74 E-value=2.3 Score=32.13 Aligned_cols=22 Identities=23% Similarity=0.369 Sum_probs=16.8
Q ss_pred CCCCcCCchHHHHHHHH-HHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVL-LVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l-~~l~~ 22 (80)
+.|++|||||-..+.++ .-+..
T Consensus 44 l~G~nGsGKSTL~~~~ll~Gl~~ 66 (525)
T 1tf7_A 44 VSGTSGTGKTLFSIQFLYNGIIE 66 (525)
T ss_dssp EEESTTSSHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHHHh
Confidence 36999999999999863 44443
No 315
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=63.64 E-value=3.5 Score=28.84 Aligned_cols=21 Identities=24% Similarity=0.199 Sum_probs=14.5
Q ss_pred CCCcCCchHHHHHH-HHHHHhh
Q psy17057 2 AGSTMRDKTPFKLV-VLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~-~l~~l~~ 22 (80)
.++||+|||.+.-+ ++.++..
T Consensus 58 ~a~TGsGKT~~~~~~~l~~~~~ 79 (417)
T 2i4i_A 58 CAQTGSGKTAAFLLPILSQIYS 79 (417)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHHHHHh
Confidence 57899999987655 4444443
No 316
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=63.13 E-value=2.6 Score=31.35 Aligned_cols=18 Identities=11% Similarity=0.141 Sum_probs=14.9
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
|.|++|+|||-..+.++.
T Consensus 183 I~G~sGsGKTTLl~~la~ 200 (400)
T 3lda_A 183 LFGEFRTGKSQLCHTLAV 200 (400)
T ss_dssp EEESTTSSHHHHHHHHHH
T ss_pred EEcCCCCChHHHHHHHHH
Confidence 479999999999986643
No 317
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=62.96 E-value=3.7 Score=30.24 Aligned_cols=18 Identities=11% Similarity=0.169 Sum_probs=15.3
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|+||+|||-.-++|.-.
T Consensus 35 lGpnGsGKSTLLr~iaGl 52 (362)
T 2it1_A 35 LGPSGSGKSTLLYTIAGI 52 (362)
T ss_dssp ECCTTSSHHHHHHHHHTS
T ss_pred ECCCCchHHHHHHHHhcC
Confidence 499999999999988653
No 318
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=62.73 E-value=3.8 Score=30.15 Aligned_cols=18 Identities=22% Similarity=0.152 Sum_probs=15.2
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|+||+|||-.-++|.-.
T Consensus 35 lGpnGsGKSTLLr~iaGl 52 (359)
T 2yyz_A 35 LGPSGCGKTTTLLMLAGI 52 (359)
T ss_dssp ECSTTSSHHHHHHHHHTS
T ss_pred EcCCCchHHHHHHHHHCC
Confidence 499999999999988653
No 319
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=62.64 E-value=3.2 Score=27.20 Aligned_cols=19 Identities=11% Similarity=-0.094 Sum_probs=16.6
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|..|+|||-..+.+..+|
T Consensus 11 ~G~~GsGKsT~a~~La~~l 29 (217)
T 3be4_A 11 IGAPGSGKGTQCEFIKKEY 29 (217)
T ss_dssp EECTTSSHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 5889999999999987765
No 320
>2v6i_A RNA helicase; membrane, hydrolase, transmembrane, RNA replication, viral replication, nucleotide-binding; 2.10A {Kokobera virus} PDB: 2v6j_A
Probab=62.58 E-value=2 Score=31.52 Aligned_cols=20 Identities=15% Similarity=-0.107 Sum_probs=14.3
Q ss_pred CCCcCCchHHHHHH-HHHHHh
Q psy17057 2 AGSTMRDKTPFKLV-VLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~-~l~~l~ 21 (80)
.|+||+|||++.-+ ++..+.
T Consensus 8 ~a~TGsGKT~~~l~~~l~~~~ 28 (431)
T 2v6i_A 8 DLHPGAGKTRRVLPQLVREAV 28 (431)
T ss_dssp ECCTTSCTTTTHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHHHH
Confidence 58999999999744 443443
No 321
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=62.58 E-value=3.1 Score=30.68 Aligned_cols=22 Identities=23% Similarity=0.205 Sum_probs=18.3
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
++|.+|.|||-....+....+.
T Consensus 205 i~G~pg~GKT~lal~ia~~~a~ 226 (444)
T 2q6t_A 205 IAARPAMGKTAFALTIAQNAAL 226 (444)
T ss_dssp EEECTTSCHHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHH
Confidence 5899999999998888777654
No 322
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=62.48 E-value=4 Score=29.81 Aligned_cols=22 Identities=23% Similarity=0.289 Sum_probs=18.3
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
++|++|+|||-++..++..++.
T Consensus 68 I~G~pGsGKTtLal~la~~~~~ 89 (356)
T 1u94_A 68 IYGPESSGKTTLTLQVIAAAQR 89 (356)
T ss_dssp EECSTTSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 5799999999999888776654
No 323
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=62.21 E-value=3.9 Score=30.12 Aligned_cols=18 Identities=17% Similarity=0.038 Sum_probs=15.2
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|+||+|||-.-++|.-.
T Consensus 35 lGpnGsGKSTLLr~iaGl 52 (372)
T 1g29_1 35 LGPSGCGKTTTLRMIAGL 52 (372)
T ss_dssp ECSTTSSHHHHHHHHHTS
T ss_pred ECCCCcHHHHHHHHHHcC
Confidence 499999999999988653
No 324
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=62.03 E-value=2.7 Score=32.16 Aligned_cols=19 Identities=11% Similarity=0.095 Sum_probs=16.6
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|||||-..++++..+
T Consensus 375 vG~sGsGKSTll~~l~g~~ 393 (582)
T 3b5x_A 375 VGRSGSGKSTIANLFTRFY 393 (582)
T ss_pred ECCCCCCHHHHHHHHhcCC
Confidence 5999999999999987754
No 325
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=61.89 E-value=4 Score=30.59 Aligned_cols=23 Identities=26% Similarity=0.020 Sum_probs=18.7
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
|+|++|+|||-++--+..+|...
T Consensus 105 ivG~~GvGKTT~a~~LA~~l~~~ 127 (433)
T 2xxa_A 105 MAGLQGAGKTTSVGKLGKFLREK 127 (433)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHHh
Confidence 46999999999888777777654
No 326
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=61.87 E-value=4.1 Score=26.93 Aligned_cols=20 Identities=20% Similarity=0.009 Sum_probs=17.7
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.|+.|+|||-+..-+..+|.
T Consensus 20 ~GkgGvGKTTl~~~La~~l~ 39 (262)
T 1yrb_A 20 VGTAGSGKTTLTGEFGRYLE 39 (262)
T ss_dssp ECSTTSSHHHHHHHHHHHHT
T ss_pred eCCCCCCHHHHHHHHHHHHH
Confidence 59999999999998888776
No 327
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=61.74 E-value=4 Score=27.50 Aligned_cols=20 Identities=25% Similarity=0.127 Sum_probs=17.8
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
-|.+|+|||-..+.+..+|-
T Consensus 32 ~G~~GsGKsT~~~~l~~~l~ 51 (229)
T 4eaq_A 32 EGPEGSGKTTVINEVYHRLV 51 (229)
T ss_dssp ECCTTSCHHHHHHHHHHHHT
T ss_pred EcCCCCCHHHHHHHHHHHHh
Confidence 58999999999999988875
No 328
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=61.48 E-value=3.9 Score=30.23 Aligned_cols=20 Identities=20% Similarity=0.237 Sum_probs=17.2
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-..+.+...+
T Consensus 174 l~G~~GsGKSTl~~~l~~~~ 193 (377)
T 1svm_A 174 FKGPIDSGKTTLAAALLELC 193 (377)
T ss_dssp EECSTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHhhc
Confidence 46999999999999988754
No 329
>3l9o_A ATP-dependent RNA helicase DOB1; REC-A fold, winged-helix-turn-helix, antiparallel-coiled-COI domain, ATP-binding, helicase, hydrolase; 3.39A {Saccharomyces cerevisiae}
Probab=61.37 E-value=3.7 Score=34.36 Aligned_cols=53 Identities=15% Similarity=0.068 Sum_probs=28.6
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccCccchhhHHHHHHHHHHHHhcCccc
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRDTKFFDMFSTVIVSAWFQAFGNAKT 55 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~~~~~~~l~~~i~~sileafGnAkT 55 (80)
++++||+|||.+.-+.+...+..... --=..+...|..|+...+-+.|+....
T Consensus 204 V~ApTGSGKTlva~l~i~~~l~~g~r--vlvl~PtraLa~Q~~~~l~~~~~~Vgl 256 (1108)
T 3l9o_A 204 VSAHTSAGKTVVAEYAIAQSLKNKQR--VIYTSPIKALSNQKYRELLAEFGDVGL 256 (1108)
T ss_dssp EECCSSSHHHHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHTSSEEE
T ss_pred EECCCCCChHHHHHHHHHHHHhcCCe--EEEEcCcHHHHHHHHHHHHHHhCCccE
Confidence 36899999999887766554322110 000112344555544446666664433
No 330
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=61.21 E-value=1.9 Score=28.70 Aligned_cols=19 Identities=16% Similarity=0.067 Sum_probs=15.4
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.|.+|||||-..+++..+
T Consensus 25 i~G~~GsGKSTl~~~L~~~ 43 (230)
T 2vp4_A 25 IEGNIGSGKTTYLNHFEKY 43 (230)
T ss_dssp EECSTTSCHHHHHHTTGGG
T ss_pred EECCCCCCHHHHHHHHHhc
Confidence 3599999999988877554
No 331
>1gm5_A RECG; helicase, replication restart; HET: DNA ADP; 3.24A {Thermotoga maritima} SCOP: a.24.21.1 b.40.4.9 c.37.1.19 c.37.1.19
Probab=61.08 E-value=3.9 Score=33.03 Aligned_cols=21 Identities=19% Similarity=0.137 Sum_probs=16.6
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
.|+||+|||++.-+.+...+.
T Consensus 395 ~a~TGSGKTlvall~il~~l~ 415 (780)
T 1gm5_A 395 QGDVGSGKTVVAQLAILDNYE 415 (780)
T ss_dssp ECCSSSSHHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHHHH
Confidence 589999999998887765443
No 332
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=61.02 E-value=4.1 Score=30.23 Aligned_cols=19 Identities=21% Similarity=0.036 Sum_probs=14.0
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.++||+|||.+.-+.+...
T Consensus 117 ~apTGsGKTl~~~lpil~~ 135 (563)
T 3i5x_A 117 RAKTGTGKTFAFLIPIFQH 135 (563)
T ss_dssp ECCTTSCHHHHHHHHHHHH
T ss_pred ECCCCCCccHHHHHHHHHH
Confidence 4689999999866654433
No 333
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=60.96 E-value=4.2 Score=30.04 Aligned_cols=18 Identities=17% Similarity=0.038 Sum_probs=15.1
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|+||+|||-.-++|.-.
T Consensus 43 lGpnGsGKSTLLr~iaGl 60 (372)
T 1v43_A 43 LGPSGCGKTTTLRMIAGL 60 (372)
T ss_dssp ECCTTSSHHHHHHHHHTS
T ss_pred ECCCCChHHHHHHHHHcC
Confidence 499999999999988543
No 334
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=60.78 E-value=4.1 Score=31.02 Aligned_cols=23 Identities=17% Similarity=0.050 Sum_probs=18.9
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
|+|.+|+|||-+..-+..+|...
T Consensus 105 ivG~~G~GKTTt~~kLA~~l~~~ 127 (443)
T 3dm5_A 105 MVGIQGSGKTTTVAKLARYFQKR 127 (443)
T ss_dssp EECCTTSSHHHHHHHHHHHHHTT
T ss_pred EECcCCCCHHHHHHHHHHHHHHC
Confidence 47999999999988887877653
No 335
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=60.76 E-value=3 Score=29.59 Aligned_cols=18 Identities=33% Similarity=0.366 Sum_probs=15.2
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|||||-.-+++.-.
T Consensus 70 ~G~NGsGKSTLlk~l~Gl 87 (290)
T 2bbs_A 70 AGSTGAGKTSLLMMIMGE 87 (290)
T ss_dssp EESTTSSHHHHHHHHTTS
T ss_pred ECCCCCcHHHHHHHHhcC
Confidence 499999999999988553
No 336
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=60.67 E-value=3.4 Score=30.23 Aligned_cols=17 Identities=29% Similarity=0.180 Sum_probs=14.8
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|+||+|||-.-++|.-
T Consensus 32 lGpnGsGKSTLLr~iaG 48 (348)
T 3d31_A 32 LGPTGAGKTLFLELIAG 48 (348)
T ss_dssp ECCCTHHHHHHHHHHHT
T ss_pred ECCCCccHHHHHHHHHc
Confidence 49999999999998854
No 337
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=60.64 E-value=2.7 Score=32.63 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=17.5
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
-|.+|||||-+.+.+...|-
T Consensus 375 iG~sGSGKSTLar~La~~L~ 394 (552)
T 3cr8_A 375 TGLSGAGKSTLARALAARLM 394 (552)
T ss_dssp EESSCHHHHHHHHHHHHHHH
T ss_pred ECCCCChHHHHHHHHHHhhc
Confidence 58999999999999888764
No 338
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=60.31 E-value=3.4 Score=29.05 Aligned_cols=17 Identities=18% Similarity=0.173 Sum_probs=15.0
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|+||+|||-+-+.++
T Consensus 170 l~G~sG~GKSTLln~l~ 186 (302)
T 2yv5_A 170 LAGPSGVGKSSILSRLT 186 (302)
T ss_dssp EECSTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 35999999999999887
No 339
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=60.25 E-value=3.9 Score=28.94 Aligned_cols=22 Identities=14% Similarity=0.021 Sum_probs=17.9
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|++|+|||-+...+..++..
T Consensus 103 i~G~~G~GKTT~~~~la~~~~~ 124 (297)
T 1j8m_F 103 LVGVQGTGKTTTAGKLAYFYKK 124 (297)
T ss_dssp EECSSCSSTTHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 3589999999988888777654
No 340
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=60.21 E-value=3.7 Score=29.99 Aligned_cols=22 Identities=18% Similarity=0.276 Sum_probs=18.9
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+||.+|.|||.....+..+++.
T Consensus 51 IaG~pG~GKTt~al~ia~~~a~ 72 (338)
T 4a1f_A 51 IGARPSMGKTSLMMNMVLSALN 72 (338)
T ss_dssp EEECTTSCHHHHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHH
Confidence 5899999999999888887765
No 341
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=60.14 E-value=4.1 Score=31.15 Aligned_cols=20 Identities=30% Similarity=0.238 Sum_probs=17.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|-+|+|||-+++.+.++|
T Consensus 40 lvGlpGSGKSTia~~La~~L 59 (520)
T 2axn_A 40 MVGLPARGKTYISKKLTRYL 59 (520)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHH
Confidence 46999999999999998877
No 342
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=59.74 E-value=3.9 Score=29.67 Aligned_cols=19 Identities=5% Similarity=-0.160 Sum_probs=16.5
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|.+|+|||.+-+.++..+
T Consensus 77 iG~nGaGKTTLl~~I~g~~ 95 (347)
T 2obl_A 77 FAGSGVGKSTLLGMICNGA 95 (347)
T ss_dssp EECTTSSHHHHHHHHHHHS
T ss_pred ECCCCCCHHHHHHHHhcCC
Confidence 4899999999999988764
No 343
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=59.70 E-value=4.4 Score=29.05 Aligned_cols=21 Identities=14% Similarity=-0.001 Sum_probs=17.8
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|.+|+|||-.-+.++.++.
T Consensus 60 i~G~~GaGKSTLl~~l~g~~~ 80 (337)
T 2qm8_A 60 ITGVPGVGKSTTIDALGSLLT 80 (337)
T ss_dssp EECCTTSCHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHhhh
Confidence 469999999999999887664
No 344
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=59.61 E-value=3.9 Score=30.39 Aligned_cols=19 Identities=26% Similarity=0.256 Sum_probs=16.2
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|+||+|||-+-++|.-.+
T Consensus 53 lGpsGsGKSTLLr~iaGl~ 71 (390)
T 3gd7_A 53 LGRTGSGKSTLLSAFLRLL 71 (390)
T ss_dssp EESTTSSHHHHHHHHHTCS
T ss_pred ECCCCChHHHHHHHHhCCC
Confidence 5899999999999987644
No 345
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=59.47 E-value=4 Score=26.20 Aligned_cols=20 Identities=15% Similarity=0.079 Sum_probs=16.2
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-+...++..+
T Consensus 35 i~G~~g~GKTTl~~~l~~~~ 54 (221)
T 2wsm_A 35 IMGAIGSGKTLLIERTIERI 54 (221)
T ss_dssp EEECTTSCHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHh
Confidence 46999999999887777664
No 346
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=59.39 E-value=5.3 Score=29.75 Aligned_cols=21 Identities=14% Similarity=0.090 Sum_probs=18.1
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
-|++|.|||-+.+.+.+.+..
T Consensus 207 ~G~pG~GKT~la~~la~~l~~ 227 (468)
T 3pxg_A 207 IGEPGVGKTAIAEGLAQQIIN 227 (468)
T ss_dssp ESCTTTTTHHHHHHHHHHHHS
T ss_pred ECCCCCCHHHHHHHHHHHHHh
Confidence 599999999999998887643
No 347
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=59.27 E-value=3.6 Score=30.49 Aligned_cols=19 Identities=16% Similarity=0.006 Sum_probs=16.8
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++.+...+
T Consensus 173 ~GppGtGKT~lA~aia~~~ 191 (444)
T 2zan_A 173 FGPPGTGKSYLAKAVATEA 191 (444)
T ss_dssp ECSTTSSHHHHHHHHHHHC
T ss_pred ECCCCCCHHHHHHHHHHHc
Confidence 5999999999999887765
No 348
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=59.03 E-value=3.1 Score=30.38 Aligned_cols=18 Identities=22% Similarity=0.277 Sum_probs=15.2
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|+|||-.-++|.-.
T Consensus 37 lGpnGsGKSTLLr~iaGl 54 (353)
T 1oxx_K 37 LGPSGAGKTTFMRIIAGL 54 (353)
T ss_dssp ECSCHHHHHHHHHHHHTS
T ss_pred ECCCCCcHHHHHHHHhCC
Confidence 499999999999988543
No 349
>2p6r_A Afuhel308 helicase; protein-DNA complex, SF2 helicase, archaeal helicase, DNA repair,, DNA binding protein/DNA complex; 3.00A {Archaeoglobus fulgidus} SCOP: a.4.5.43 a.289.1.2 c.37.1.19 c.37.1.19 PDB: 2p6u_A
Probab=58.90 E-value=3 Score=32.26 Aligned_cols=19 Identities=21% Similarity=0.176 Sum_probs=14.5
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.++||+|||.+.-+.+..
T Consensus 45 v~apTGsGKT~~~~l~il~ 63 (702)
T 2p6r_A 45 LAMPTAAGKTLLAEMAMVR 63 (702)
T ss_dssp EECSSHHHHHHHHHHHHHH
T ss_pred EEcCCccHHHHHHHHHHHH
Confidence 3689999999998655543
No 350
>2xgj_A ATP-dependent RNA helicase DOB1; hydrolase-RNA complex, hydrolase, tramp, exosome, DEAD, nucleotide-binding; HET: ADP; 2.90A {Saccharomyces cerevisiae}
Probab=58.82 E-value=4.4 Score=33.54 Aligned_cols=51 Identities=16% Similarity=0.086 Sum_probs=26.9
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhccCCcccCccchhhHHHHHHHHHHHHhcCc
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHEDFGLLNRDTKFFDMFSTVIVSAWFQAFGNA 53 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~~~~~~~~~~~~~~l~~~i~~sileafGnA 53 (80)
++++||+|||.+.-+++...+..... --=..+...|..|+...+-+.|+..
T Consensus 106 V~apTGSGKTlva~lai~~~l~~g~r--vL~l~PtkaLa~Q~~~~l~~~~~~v 156 (1010)
T 2xgj_A 106 VSAHTSAGKTVVAEYAIAQSLKNKQR--VIYTSPIKALSNQKYRELLAEFGDV 156 (1010)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHTTCE--EEEEESSHHHHHHHHHHHHHHHSCE
T ss_pred EECCCCCChHHHHHHHHHHHhccCCe--EEEECChHHHHHHHHHHHHHHhCCE
Confidence 36899999999987666544322110 0001122445555444455556633
No 351
>3fmo_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 2.51A {Homo sapiens}
Probab=58.77 E-value=4.5 Score=28.17 Aligned_cols=15 Identities=13% Similarity=0.056 Sum_probs=11.5
Q ss_pred CCCcCCchHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVV 16 (80)
Q Consensus 2 aG~sg~gKte~~k~~ 16 (80)
.++||+|||.+.-+.
T Consensus 137 ~a~TGsGKT~a~~lp 151 (300)
T 3fmo_B 137 QSQSGTGKTAAFVLA 151 (300)
T ss_dssp ECCTTSSHHHHHHHH
T ss_pred ECCCCCCccHHHHHH
Confidence 468999999985543
No 352
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=58.11 E-value=5.3 Score=25.15 Aligned_cols=17 Identities=18% Similarity=0.268 Sum_probs=13.5
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
|-|++|+|||-+-.-+.
T Consensus 28 I~G~NGsGKStil~Ai~ 44 (149)
T 1f2t_A 28 IIGQNGSGKSSLLDAIL 44 (149)
T ss_dssp EECCTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 45999999999876553
No 353
>4a4z_A Antiviral helicase SKI2; hydrolase, ATPase, mRNA degradation, exosome; HET: ANP; 2.40A {Saccharomyces cerevisiae} PDB: 4a4k_A
Probab=58.08 E-value=4.3 Score=33.51 Aligned_cols=20 Identities=20% Similarity=0.056 Sum_probs=15.4
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.++||+|||.+..+.+..+.
T Consensus 60 ~apTGsGKTlv~~~~i~~~~ 79 (997)
T 4a4z_A 60 AAHTSAGKTVVAEYAIAMAH 79 (997)
T ss_dssp ECCTTSCSHHHHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHHHHH
Confidence 58999999998766665543
No 354
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=57.88 E-value=6.9 Score=26.19 Aligned_cols=19 Identities=11% Similarity=-0.146 Sum_probs=15.9
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|..||||+-.++.+.+.+
T Consensus 6 ~GpPGsGKgTqa~~La~~~ 24 (206)
T 3sr0_A 6 LGPPGAGKGTQAKRLAKEK 24 (206)
T ss_dssp ECSTTSSHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHH
Confidence 4899999998888887764
No 355
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=57.86 E-value=4.4 Score=30.41 Aligned_cols=19 Identities=5% Similarity=-0.164 Sum_probs=16.7
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|.+|+|||.+-++|...+
T Consensus 163 vG~sGsGKSTLl~~Iag~~ 181 (438)
T 2dpy_A 163 FAGSGVGKSVLLGMMARYT 181 (438)
T ss_dssp EECTTSSHHHHHHHHHHHS
T ss_pred ECCCCCCHHHHHHHHhccc
Confidence 4899999999999998865
No 356
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=57.75 E-value=4.6 Score=29.18 Aligned_cols=20 Identities=15% Similarity=0.223 Sum_probs=14.8
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|-|++|||||-+-..|.-.|
T Consensus 28 i~G~NGaGKTTll~ai~~al 47 (365)
T 3qf7_A 28 VEGPNGAGKSSLFEAISFAL 47 (365)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 45999999998876654433
No 357
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=57.73 E-value=3.4 Score=27.44 Aligned_cols=20 Identities=15% Similarity=0.252 Sum_probs=17.6
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|-.|+|||-..+.+..+|
T Consensus 7 ~~G~~g~GKtt~~~~l~~~l 26 (241)
T 2ocp_A 7 IEGNIAVGKSTFVKLLTKTY 26 (241)
T ss_dssp EEECTTSSHHHHHHHHHHHC
T ss_pred EEcCCCCCHHHHHHHHHHHc
Confidence 35889999999999998887
No 358
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=57.55 E-value=5.8 Score=28.91 Aligned_cols=22 Identities=23% Similarity=0.031 Sum_probs=17.7
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
|-++|.|||.++-.++..+...
T Consensus 62 ad~~GlGKT~~ai~~i~~~~~~ 83 (500)
T 1z63_A 62 ADDMGLGKTLQTIAVFSDAKKE 83 (500)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHT
T ss_pred EeCCCCcHHHHHHHHHHHHHhc
Confidence 5689999999988887776543
No 359
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=57.30 E-value=2.7 Score=30.96 Aligned_cols=19 Identities=21% Similarity=0.148 Sum_probs=15.9
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
|.|.+|||||-.++.+...
T Consensus 263 l~G~pGSGKSTla~~L~~~ 281 (416)
T 3zvl_A 263 AVGFPGAGKSTFIQEHLVS 281 (416)
T ss_dssp EESCTTSSHHHHHHHHTGG
T ss_pred EECCCCCCHHHHHHHHHHh
Confidence 4799999999999887654
No 360
>3rc3_A ATP-dependent RNA helicase SUPV3L1, mitochondrial; SUV3, nucleus, hydrolase; HET: ANP; 2.08A {Homo sapiens} PDB: 3rc8_A
Probab=57.18 E-value=4.2 Score=32.30 Aligned_cols=19 Identities=21% Similarity=0.183 Sum_probs=14.1
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
.|+||+|||. .++..+...
T Consensus 161 ~apTGSGKT~---~al~~l~~~ 179 (677)
T 3rc3_A 161 SGPTNSGKTY---HAIQKYFSA 179 (677)
T ss_dssp ECCTTSSHHH---HHHHHHHHS
T ss_pred EcCCCCCHHH---HHHHHHHhc
Confidence 5899999998 566665543
No 361
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=56.72 E-value=2.9 Score=30.78 Aligned_cols=20 Identities=15% Similarity=-0.142 Sum_probs=14.0
Q ss_pred CCCcCCchHHH-HHHHHHHHh
Q psy17057 2 AGSTMRDKTPF-KLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~-~k~~l~~l~ 21 (80)
.++||+|||.+ .-.++.++.
T Consensus 25 ~a~TGsGKT~~~~~~~l~~~~ 45 (451)
T 2jlq_A 25 DLHPGAGKTKRILPSIVREAL 45 (451)
T ss_dssp CCCTTSSCCTTHHHHHHHHHH
T ss_pred ECCCCCCHhhHHHHHHHHHHH
Confidence 68999999995 444444443
No 362
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=56.45 E-value=4.1 Score=30.80 Aligned_cols=20 Identities=20% Similarity=0.225 Sum_probs=17.4
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
-|++|||||-..+++.-++.
T Consensus 144 vGpnGsGKSTLlr~L~Gl~~ 163 (460)
T 2npi_A 144 VGGSQTGKTSLSRTLCSYAL 163 (460)
T ss_dssp EESTTSSHHHHHHHHHHTTH
T ss_pred ECCCCCCHHHHHHHHhCccc
Confidence 48999999999999988754
No 363
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=56.35 E-value=10 Score=23.86 Aligned_cols=22 Identities=14% Similarity=-0.008 Sum_probs=19.0
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
.+|.|.|||-++-.+..+|+..
T Consensus 8 s~kgG~GKTt~a~~la~~la~~ 29 (206)
T 4dzz_A 8 NPKGGSGKTTAVINIATALSRS 29 (206)
T ss_dssp CSSTTSSHHHHHHHHHHHHHHT
T ss_pred eCCCCccHHHHHHHHHHHHHHC
Confidence 5789999999999988888764
No 364
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=56.11 E-value=3 Score=35.22 Aligned_cols=20 Identities=15% Similarity=0.134 Sum_probs=17.1
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|+||||||...++++..+
T Consensus 1064 ivG~sGsGKSTl~~~l~g~~ 1083 (1284)
T 3g5u_A 1064 LVGSSGCGKSTVVQLLERFY 1083 (1284)
T ss_dssp EECSSSTTHHHHHHHHTTSS
T ss_pred EECCCCCCHHHHHHHHhcCc
Confidence 46999999999999997743
No 365
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=56.10 E-value=7.6 Score=26.05 Aligned_cols=21 Identities=14% Similarity=0.006 Sum_probs=18.4
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
-|..|+|||-..+.+..+|-.
T Consensus 12 eG~~gsGKsT~~~~l~~~l~~ 32 (213)
T 4edh_A 12 EGPEGAGKSTNRDYLAERLRE 32 (213)
T ss_dssp ECSTTSSHHHHHHHHHHHHHT
T ss_pred EcCCCCCHHHHHHHHHHHHHH
Confidence 489999999999999998853
No 366
>4a2w_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.70A {Anas platyrhynchos}
Probab=56.01 E-value=3.7 Score=33.35 Aligned_cols=23 Identities=13% Similarity=0.125 Sum_probs=17.5
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
++++||+|||.+.-+++..++..
T Consensus 268 l~a~TGsGKTl~~~~~i~~~l~~ 290 (936)
T 4a2w_A 268 ICAPTGSGKTFVSILICEHHFQN 290 (936)
T ss_dssp EECCTTSCHHHHHHHHHHTTTTT
T ss_pred EEeCCCchHHHHHHHHHHHHHHh
Confidence 36799999999988777655443
No 367
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=55.90 E-value=3.4 Score=30.42 Aligned_cols=15 Identities=20% Similarity=-0.137 Sum_probs=12.1
Q ss_pred CCCCcCCchHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLV 15 (80)
Q Consensus 1 ~aG~sg~gKte~~k~ 15 (80)
+.++||+|||.+.-+
T Consensus 13 v~a~TGSGKT~~~l~ 27 (440)
T 1yks_A 13 LDFHPGAGKTRRFLP 27 (440)
T ss_dssp ECCCTTSSTTTTHHH
T ss_pred EEcCCCCCHHHHHHH
Confidence 368999999999644
No 368
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=55.63 E-value=5.7 Score=30.15 Aligned_cols=18 Identities=22% Similarity=0.012 Sum_probs=15.6
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
-|++|.|||-+++.+...
T Consensus 244 ~GppGtGKT~lAraia~~ 261 (489)
T 3hu3_A 244 YGPPGTGKTLIARAVANE 261 (489)
T ss_dssp ECSTTSSHHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHHHH
Confidence 599999999999988654
No 369
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=55.24 E-value=7 Score=30.49 Aligned_cols=21 Identities=14% Similarity=0.117 Sum_probs=18.1
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
-|++|.|||-+.+.+...+..
T Consensus 213 ~G~~GtGKT~la~~la~~l~~ 233 (758)
T 1r6b_X 213 VGESGVGKTAIAEGLAWRIVQ 233 (758)
T ss_dssp ECCTTSSHHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHHHh
Confidence 599999999999999887743
No 370
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=55.11 E-value=6.7 Score=30.79 Aligned_cols=21 Identities=14% Similarity=0.090 Sum_probs=18.1
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
-|++|.|||.+++.+.+.+..
T Consensus 207 ~G~pGtGKT~la~~la~~l~~ 227 (758)
T 3pxi_A 207 IGEPGVGKTAIAEGLAQQIIN 227 (758)
T ss_dssp ESCTTTTTHHHHHHHHHHHHS
T ss_pred ECCCCCCHHHHHHHHHHHHhc
Confidence 599999999999999887643
No 371
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=54.97 E-value=6.2 Score=25.99 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=14.3
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
|.|++|+|||-+-..|.-
T Consensus 28 I~G~NgsGKStil~ai~~ 45 (203)
T 3qks_A 28 IIGQNGSGKSSLLDAILV 45 (203)
T ss_dssp EECCTTSSHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHH
Confidence 469999999998876543
No 372
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=54.94 E-value=6.4 Score=30.37 Aligned_cols=24 Identities=17% Similarity=0.257 Sum_probs=19.1
Q ss_pred CCCCcCCchHHHHHHHHHHHhhhc
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~~ 24 (80)
|.|+.|.|||-+.--++.+|+...
T Consensus 210 I~GPPGTGKT~ti~~~I~~l~~~~ 233 (646)
T 4b3f_X 210 IHGPPGTGKTTTVVEIILQAVKQG 233 (646)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHTT
T ss_pred EECCCCCCHHHHHHHHHHHHHhCC
Confidence 469999999988777777776643
No 373
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=54.70 E-value=5.7 Score=30.50 Aligned_cols=20 Identities=15% Similarity=0.149 Sum_probs=16.5
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+-|++|||||-+-+++.-.+
T Consensus 34 liG~nGsGKSTLl~~l~Gl~ 53 (483)
T 3euj_A 34 LSGGNGAGKSTTMAGFVTAL 53 (483)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHhcCC
Confidence 35999999999999887644
No 374
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=54.50 E-value=4.2 Score=31.12 Aligned_cols=19 Identities=11% Similarity=0.163 Sum_probs=16.3
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|+||||||-..++++..+
T Consensus 375 vG~sGsGKSTLl~~l~g~~ 393 (582)
T 3b60_A 375 VGRSGSGKSTIASLITRFY 393 (582)
T ss_dssp EECTTSSHHHHHHHHTTTT
T ss_pred ECCCCCCHHHHHHHHhhcc
Confidence 5999999999999987654
No 375
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=54.03 E-value=7.2 Score=24.64 Aligned_cols=17 Identities=12% Similarity=-0.025 Sum_probs=14.0
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|.+|+|||-+-+.++.
T Consensus 11 vG~~g~GKSTLl~~l~~ 27 (199)
T 2f9l_A 11 IGDSGVGKSNLLSRFTR 27 (199)
T ss_dssp ESSTTSSHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHhc
Confidence 59999999988777654
No 376
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=54.00 E-value=5.4 Score=29.29 Aligned_cols=22 Identities=18% Similarity=0.190 Sum_probs=18.1
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|.|++|+|||-....++..+..
T Consensus 66 I~GppGsGKSTLal~la~~~~~ 87 (356)
T 3hr8_A 66 IFGQESSGKTTLALHAIAEAQK 87 (356)
T ss_dssp EEESTTSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHh
Confidence 4699999999999888876643
No 377
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=53.98 E-value=8 Score=31.05 Aligned_cols=20 Identities=15% Similarity=-0.008 Sum_probs=17.4
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+-|++|.|||.+++.+...+
T Consensus 516 L~GppGtGKT~Lakala~~~ 535 (806)
T 1ypw_A 516 FYGPPGCGKTLLAKAIANEC 535 (806)
T ss_dssp CBCCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 46999999999999998765
No 378
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=53.70 E-value=3.6 Score=28.94 Aligned_cols=17 Identities=12% Similarity=0.126 Sum_probs=14.2
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
|-|++|+|||-+-..+.
T Consensus 29 i~G~NGsGKS~ll~ai~ 45 (322)
T 1e69_A 29 IVGPNGSGKSNIIDAIK 45 (322)
T ss_dssp EECCTTTCSTHHHHHHH
T ss_pred EECCCCCcHHHHHHHHH
Confidence 35999999999988764
No 379
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=53.66 E-value=9 Score=28.21 Aligned_cols=23 Identities=13% Similarity=0.231 Sum_probs=19.7
Q ss_pred CCCcCCchHHHHHHHHHHHhhhc
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~~ 24 (80)
-|..|+|||-+...++.+|....
T Consensus 51 ~G~aGTGKT~ll~~~~~~l~~~~ 73 (459)
T 3upu_A 51 NGPAGTGATTLTKFIIEALISTG 73 (459)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHTT
T ss_pred EeCCCCCHHHHHHHHHHHHHhcC
Confidence 48899999999999999987654
No 380
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=53.27 E-value=5 Score=31.38 Aligned_cols=18 Identities=22% Similarity=0.207 Sum_probs=15.6
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
|.|++|+|||..-+++.-
T Consensus 387 i~G~NGsGKSTLlk~l~G 404 (607)
T 3bk7_A 387 IVGPNGIGKTTFVKMLAG 404 (607)
T ss_dssp EECCTTSSHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHhc
Confidence 469999999999998865
No 381
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=53.17 E-value=4.3 Score=31.25 Aligned_cols=19 Identities=21% Similarity=0.219 Sum_probs=16.2
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|+||||||-..++++..+
T Consensus 387 vG~sGsGKSTll~~l~g~~ 405 (598)
T 3qf4_B 387 VGPTGSGKTTIVNLLMRFY 405 (598)
T ss_dssp ECCTTSSTTHHHHHHTTSS
T ss_pred ECCCCCcHHHHHHHHhcCc
Confidence 4999999999999887643
No 382
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=52.56 E-value=7 Score=26.74 Aligned_cols=21 Identities=19% Similarity=0.056 Sum_probs=18.7
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
.|-+|+|||-..+.+..+|-.
T Consensus 27 ~G~~g~GKst~~~~l~~~l~~ 47 (223)
T 3ld9_A 27 EGIDGSGKTTQSHLLAEYLSE 47 (223)
T ss_dssp ECSTTSSHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHhh
Confidence 589999999999999998865
No 383
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=52.31 E-value=9.3 Score=25.96 Aligned_cols=19 Identities=11% Similarity=-0.052 Sum_probs=15.6
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|..||||+-.++.+.+.+
T Consensus 35 lGpPGsGKgTqa~~L~~~~ 53 (217)
T 3umf_A 35 LGGPGSGKGTQCEKLVQKF 53 (217)
T ss_dssp ECCTTCCHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHH
Confidence 4899999988888877754
No 384
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=52.10 E-value=4.4 Score=31.11 Aligned_cols=19 Identities=16% Similarity=0.228 Sum_probs=16.2
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|+||||||-.-++++..+
T Consensus 376 vG~sGsGKSTLl~~l~g~~ 394 (595)
T 2yl4_A 376 VGPSGSGKSTVLSLLLRLY 394 (595)
T ss_dssp ECCTTSSSTHHHHHHTTSS
T ss_pred ECCCCCCHHHHHHHHhcCc
Confidence 5999999999999987643
No 385
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=52.08 E-value=6.8 Score=29.07 Aligned_cols=21 Identities=29% Similarity=0.180 Sum_probs=17.8
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
|.|-+|+|||-+.+.+.++|-
T Consensus 44 lvGlpGsGKSTia~~La~~l~ 64 (469)
T 1bif_A 44 MVGLPARGKTYISKKLTRYLN 64 (469)
T ss_dssp EECCTTSSHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHh
Confidence 468999999999999888763
No 386
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=51.87 E-value=6.2 Score=26.72 Aligned_cols=20 Identities=15% Similarity=0.111 Sum_probs=16.7
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|.|+.|.|||...+.+...+
T Consensus 35 i~G~~G~GKT~L~~~~~~~~ 54 (357)
T 2fna_A 35 VLGLRRTGKSSIIKIGINEL 54 (357)
T ss_dssp EEESTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHhc
Confidence 35999999999999887754
No 387
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=51.40 E-value=6.4 Score=27.10 Aligned_cols=21 Identities=24% Similarity=0.139 Sum_probs=18.4
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
.|.+|+|||-..+.+..+|-.
T Consensus 33 eG~~GsGKsT~~~~l~~~l~~ 53 (236)
T 3lv8_A 33 EGLEGAGKSTAIQVVVETLQQ 53 (236)
T ss_dssp EESTTSCHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHh
Confidence 588999999999999998854
No 388
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=51.37 E-value=3 Score=32.43 Aligned_cols=17 Identities=24% Similarity=0.262 Sum_probs=14.4
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
|.|+||||||-..+.++
T Consensus 353 IiGpnGsGKSTLl~~i~ 369 (670)
T 3ux8_A 353 VTGVSGSGKSTLVNEVL 369 (670)
T ss_dssp EECSTTSSHHHHHTTTH
T ss_pred EEeeCCCCHHHHHHHHH
Confidence 45999999999988765
No 389
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=51.24 E-value=8.2 Score=29.57 Aligned_cols=19 Identities=21% Similarity=0.013 Sum_probs=16.1
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|+|||-+.+.+...+
T Consensus 70 ~GppGtGKTtLaraIa~~~ 88 (499)
T 2dhr_A 70 VGPPGVGKTHLARAVAGEA 88 (499)
T ss_dssp ECSSSSSHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 5999999999999886643
No 390
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=51.21 E-value=8.5 Score=26.31 Aligned_cols=20 Identities=25% Similarity=0.139 Sum_probs=15.1
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.|+.|+|||....-.+..+.
T Consensus 18 tG~mGsGKTT~ll~~~~r~~ 37 (223)
T 2b8t_A 18 TGPMFAGKTAELIRRLHRLE 37 (223)
T ss_dssp ECSTTSCHHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHHH
Confidence 69999999987766655443
No 391
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=51.15 E-value=7.2 Score=29.02 Aligned_cols=20 Identities=15% Similarity=0.227 Sum_probs=16.8
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-+.+.+...|
T Consensus 29 l~G~~G~GKTTl~~~la~~l 48 (359)
T 2ga8_A 29 LVGSPGSGKSTIAEELCQII 48 (359)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHHHHh
Confidence 35899999999999887755
No 392
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=51.03 E-value=3 Score=26.46 Aligned_cols=17 Identities=18% Similarity=0.147 Sum_probs=13.4
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-.-+.++
T Consensus 31 lvG~~g~GKSTLl~~l~ 47 (210)
T 1pui_A 31 FAGRSNAGKSSALNTLT 47 (210)
T ss_dssp EEECTTSSHHHHHTTTC
T ss_pred EECCCCCCHHHHHHHHh
Confidence 35999999998777654
No 393
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=50.97 E-value=6.8 Score=27.30 Aligned_cols=21 Identities=14% Similarity=0.303 Sum_probs=17.9
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|+.|+|||-.+.-+++++-
T Consensus 63 i~GPPGtGKTt~a~ala~~l~ 83 (212)
T 1tue_A 63 FCGPANTGKSYFGMSFIHFIQ 83 (212)
T ss_dssp EESCGGGCHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHhC
Confidence 469999999999988888773
No 394
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=50.82 E-value=7.5 Score=29.74 Aligned_cols=17 Identities=12% Similarity=0.042 Sum_probs=14.7
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|++|||||-.-+++.-
T Consensus 53 vG~NGaGKSTLlk~l~G 69 (538)
T 1yqt_A 53 VGPNGTGKSTAVKILAG 69 (538)
T ss_dssp ECCTTSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHhC
Confidence 49999999999998744
No 395
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=50.81 E-value=7.6 Score=28.15 Aligned_cols=21 Identities=33% Similarity=0.287 Sum_probs=14.7
Q ss_pred CCCcCCchHHHHHH-HHHHHhh
Q psy17057 2 AGSTMRDKTPFKLV-VLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~-~l~~l~~ 22 (80)
..+||+|||.+.-+ ++.++..
T Consensus 99 ~a~TGsGKT~a~~lpil~~l~~ 120 (434)
T 2db3_A 99 CAQTGSGKTAAFLLPILSKLLE 120 (434)
T ss_dssp ECCTTSSHHHHHHHHHHHHHHH
T ss_pred ECCCCCCchHHHHHHHHHHHHh
Confidence 46899999997655 4445544
No 396
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=50.79 E-value=11 Score=24.25 Aligned_cols=23 Identities=17% Similarity=-0.010 Sum_probs=18.9
Q ss_pred CCCcCCchHHHHHHHHHHHhhhc
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~~ 24 (80)
..+.|.|||-++--+..+|+...
T Consensus 8 s~kgGvGKTt~a~nLa~~la~~G 30 (224)
T 1byi_A 8 GTDTEVGKTVASCALLQAAKAAG 30 (224)
T ss_dssp ESSTTSCHHHHHHHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHHHHHHHCC
Confidence 35899999999998888887653
No 397
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=50.53 E-value=7.3 Score=24.66 Aligned_cols=17 Identities=12% Similarity=-0.025 Sum_probs=14.2
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|.+|+|||-+-+.+..
T Consensus 35 vG~~g~GKSTLl~~l~~ 51 (191)
T 1oix_A 35 IGDSGVGKSNLLSRFTR 51 (191)
T ss_dssp EECTTSSHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHhc
Confidence 58999999998887654
No 398
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=50.43 E-value=7.4 Score=30.22 Aligned_cols=21 Identities=14% Similarity=0.164 Sum_probs=18.0
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|-+|||||-+++.+-+.|-
T Consensus 401 l~GlsGSGKSTiA~~La~~L~ 421 (573)
T 1m8p_A 401 LTGYMNSGKDAIARALQVTLN 421 (573)
T ss_dssp EECSTTSSHHHHHHHHHHHHH
T ss_pred eecCCCCCHHHHHHHHHHHhc
Confidence 358999999999999988765
No 399
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=50.30 E-value=7.7 Score=29.18 Aligned_cols=18 Identities=22% Similarity=0.073 Sum_probs=13.4
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
..+||+|||.+.-+.+..
T Consensus 66 ~apTGsGKTl~~~lpil~ 83 (579)
T 3sqw_A 66 RAKTGTGKTFAFLIPIFQ 83 (579)
T ss_dssp ECCTTSCHHHHHHHHHHH
T ss_pred EcCCCcHHHHHHHHHHHH
Confidence 468999999986665443
No 400
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=50.30 E-value=6.8 Score=29.32 Aligned_cols=22 Identities=14% Similarity=0.055 Sum_probs=17.7
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|.|.+|+|||-+..-+..++..
T Consensus 104 ivG~~GvGKTTla~~La~~l~~ 125 (432)
T 2v3c_C 104 LVGIQGSGKTTTAAKLARYIQK 125 (432)
T ss_dssp EECCSSSSTTHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 4689999999988877777754
No 401
>1gku_B Reverse gyrase, TOP-RG; topoisomerase, DNA supercoiling, archaea, helicase; 2.7A {Archaeoglobus fulgidus} SCOP: c.37.1.16 c.37.1.16 e.10.1.1 PDB: 1gl9_B*
Probab=50.17 E-value=9.2 Score=31.62 Aligned_cols=21 Identities=33% Similarity=0.325 Sum_probs=14.7
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.++||+|||...-.++.++.
T Consensus 76 v~apTGSGKTl~~lp~l~~~~ 96 (1054)
T 1gku_B 76 ATAPTGVGKTSFGLAMSLFLA 96 (1054)
T ss_dssp CCCCBTSCSHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHh
Confidence 468999999985555555543
No 402
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=50.14 E-value=5.4 Score=30.19 Aligned_cols=19 Identities=16% Similarity=0.092 Sum_probs=16.0
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.|++|+|||-.-+.++..
T Consensus 47 LvG~nGaGKSTLln~L~G~ 65 (427)
T 2qag_B 47 CVGETGLGKSTLMDTLFNT 65 (427)
T ss_dssp EECSTTSSSHHHHHHHHTS
T ss_pred EECCCCCCHHHHHHHHhCc
Confidence 3699999999999988654
No 403
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=50.10 E-value=6.9 Score=32.76 Aligned_cols=18 Identities=17% Similarity=0.176 Sum_probs=14.0
Q ss_pred CCCcCCchHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~ 19 (80)
.|+||+|||++.-+++..
T Consensus 630 ~~~TGsGKT~val~aa~~ 647 (1151)
T 2eyq_A 630 CGDVGFGKTEVAMRAAFL 647 (1151)
T ss_dssp ECCCCTTTHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHH
Confidence 589999999987655443
No 404
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=49.85 E-value=6.7 Score=29.80 Aligned_cols=20 Identities=25% Similarity=0.140 Sum_probs=16.9
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|.|||.+++.+...+
T Consensus 55 l~GppGtGKT~lar~lA~~l 74 (444)
T 1g41_A 55 MIGPTGVGKTEIARRLAKLA 74 (444)
T ss_dssp EECCTTSSHHHHHHHHHHHT
T ss_pred EEcCCCCCHHHHHHHHHHHc
Confidence 35999999999999887765
No 405
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=49.79 E-value=8.4 Score=26.33 Aligned_cols=22 Identities=18% Similarity=-0.058 Sum_probs=15.9
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
-|..|+|||-..+.+..+|-..
T Consensus 31 eG~~GsGKsT~~~~l~~~l~~~ 52 (227)
T 3v9p_A 31 EGIDGAGKTTHLQWFCDRLQER 52 (227)
T ss_dssp ECCC---CHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHhh
Confidence 4899999999999999988543
No 406
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=49.79 E-value=9.3 Score=25.71 Aligned_cols=22 Identities=27% Similarity=0.138 Sum_probs=18.9
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
-|..|+|||-..+.+..+|-..
T Consensus 9 eG~~gsGKsT~~~~l~~~l~~~ 30 (213)
T 4tmk_A 9 EGLEGAGKTTARNVVVETLEQL 30 (213)
T ss_dssp EECTTSCHHHHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHHHHc
Confidence 4889999999999999998554
No 407
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=49.73 E-value=10 Score=28.60 Aligned_cols=19 Identities=21% Similarity=-0.001 Sum_probs=16.4
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++.+...+
T Consensus 212 ~GPPGtGKT~lakAiA~~~ 230 (428)
T 4b4t_K 212 YGPPGTGKTMLVKAVANST 230 (428)
T ss_dssp ESCTTTTHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 4999999999999887654
No 408
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=49.65 E-value=10 Score=28.91 Aligned_cols=19 Identities=21% Similarity=0.023 Sum_probs=16.0
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|+|||-+.+.+...+
T Consensus 55 ~GppGtGKT~Laraia~~~ 73 (476)
T 2ce7_A 55 VGPPGTGKTLLARAVAGEA 73 (476)
T ss_dssp ECCTTSSHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHc
Confidence 5999999999999887643
No 409
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=49.54 E-value=4.4 Score=31.19 Aligned_cols=19 Identities=16% Similarity=0.210 Sum_probs=16.3
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|+||||||-..++++..+
T Consensus 375 vG~sGsGKSTll~~l~g~~ 393 (587)
T 3qf4_A 375 LGETGSGKSTLMNLIPRLI 393 (587)
T ss_dssp ECSSSSSHHHHHHTTTTSS
T ss_pred ECCCCCCHHHHHHHHhCCc
Confidence 4999999999999887654
No 410
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=49.49 E-value=7.1 Score=23.92 Aligned_cols=17 Identities=12% Similarity=0.112 Sum_probs=13.5
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-+.+.+.
T Consensus 8 lvG~~gvGKStL~~~l~ 24 (165)
T 2wji_A 8 LIGNPNVGKSTIFNALT 24 (165)
T ss_dssp EECSTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHh
Confidence 35999999998777654
No 411
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=49.36 E-value=6.4 Score=31.62 Aligned_cols=19 Identities=21% Similarity=0.060 Sum_probs=15.9
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+-|++|+|||-+.+.+...
T Consensus 243 L~Gp~GtGKTtLarala~~ 261 (806)
T 1ypw_A 243 LYGPPGTGKTLIARAVANE 261 (806)
T ss_dssp ECSCTTSSHHHHHHHHHHT
T ss_pred EECcCCCCHHHHHHHHHHH
Confidence 3599999999999988653
No 412
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Probab=49.07 E-value=8 Score=29.93 Aligned_cols=23 Identities=22% Similarity=0.245 Sum_probs=19.2
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
+.|.+|.|||-+...++..|...
T Consensus 169 i~G~pGTGKTt~l~~ll~~l~~~ 191 (608)
T 1w36_D 169 ISGGPGTGKTTTVAKLLAALIQM 191 (608)
T ss_dssp EECCTTSTHHHHHHHHHHHHHHT
T ss_pred EEeCCCCCHHHHHHHHHHHHHHh
Confidence 35899999999999888888654
No 413
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=49.01 E-value=3.6 Score=31.52 Aligned_cols=19 Identities=11% Similarity=0.083 Sum_probs=16.1
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|+||||||-..++++..+
T Consensus 373 vG~sGsGKSTll~~l~g~~ 391 (578)
T 4a82_A 373 VGMSGGGKSTLINLIPRFY 391 (578)
T ss_dssp ECSTTSSHHHHHTTTTTSS
T ss_pred ECCCCChHHHHHHHHhcCC
Confidence 5999999999999886643
No 414
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=48.78 E-value=7.6 Score=24.91 Aligned_cols=20 Identities=20% Similarity=0.095 Sum_probs=16.1
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
+.|.+|+|||-+..-++..+
T Consensus 43 ivG~~gvGKTtl~~~l~~~~ 62 (226)
T 2hf9_A 43 FMGAIGSGKTLLIEKLIDNL 62 (226)
T ss_dssp EEESTTSSHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHh
Confidence 35899999999887777665
No 415
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=48.45 E-value=8 Score=29.72 Aligned_cols=17 Identities=18% Similarity=0.034 Sum_probs=14.7
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|++|||||-.-|++.-
T Consensus 31 iGpNGaGKSTLlkiL~G 47 (538)
T 3ozx_A 31 LGKNGVGKTTVLKILAG 47 (538)
T ss_dssp ECCTTSSHHHHHHHHTT
T ss_pred ECCCCCcHHHHHHHHhc
Confidence 49999999999998854
No 416
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=48.44 E-value=15 Score=23.76 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=19.5
Q ss_pred CCCcCCchHHHHHHHHHHHhhhc
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~~ 24 (80)
.++.|.|||-++-.+..+|+...
T Consensus 9 s~kgGvGKTt~a~~LA~~la~~g 31 (237)
T 1g3q_A 9 SGKGGTGKTTVTANLSVALGDRG 31 (237)
T ss_dssp CSSTTSSHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHHHHHHHhcC
Confidence 57899999999999988887643
No 417
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=48.34 E-value=5.9 Score=29.51 Aligned_cols=22 Identities=9% Similarity=-0.109 Sum_probs=18.4
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|+|.+|.|||.....++.+++.
T Consensus 247 i~G~pG~GKT~lal~~a~~~a~ 268 (503)
T 1q57_A 247 VTSGSGMVMSTFVRQQALQWGT 268 (503)
T ss_dssp EEESSCHHHHHHHHHHHHHHTT
T ss_pred EeecCCCCchHHHHHHHHHHHH
Confidence 5899999999998888777654
No 418
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=48.27 E-value=7.6 Score=29.00 Aligned_cols=23 Identities=22% Similarity=0.179 Sum_probs=19.0
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
+||.+|.|||-....+..+++..
T Consensus 202 IaG~pG~GKTtlal~ia~~~a~~ 224 (444)
T 3bgw_A 202 IAARPSMGKTAFALKQAKNMSDN 224 (444)
T ss_dssp EEECSSSSHHHHHHHHHHHHHHT
T ss_pred EEeCCCCChHHHHHHHHHHHHHc
Confidence 58999999999988887776653
No 419
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=48.20 E-value=6.5 Score=28.52 Aligned_cols=18 Identities=11% Similarity=0.108 Sum_probs=14.6
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.||+|.||+.+++.+-.
T Consensus 165 i~Ge~GtGK~~lAr~ih~ 182 (387)
T 1ny5_A 165 ITGESGVGKEVVARLIHK 182 (387)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EecCCCcCHHHHHHHHHH
Confidence 469999999998886633
No 420
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=48.19 E-value=12 Score=24.76 Aligned_cols=18 Identities=11% Similarity=-0.016 Sum_probs=12.4
Q ss_pred CCCcCCchHHH-HHHHHHH
Q psy17057 2 AGSTMRDKTPF-KLVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~-~k~~l~~ 19 (80)
-|..|+|||.. -+++.++
T Consensus 14 ~G~mgsGKTT~ll~~a~r~ 32 (191)
T 1xx6_A 14 VGPMYSGKSEELIRRIRRA 32 (191)
T ss_dssp ECSTTSSHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHH
Confidence 48899999954 4555444
No 421
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=48.01 E-value=7.8 Score=23.09 Aligned_cols=18 Identities=11% Similarity=0.036 Sum_probs=13.9
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+|+|||-+...++.
T Consensus 10 v~G~~~~GKssl~~~l~~ 27 (168)
T 1z2a_A 10 VVGNGAVGKSSMIQRYCK 27 (168)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECcCCCCHHHHHHHHHc
Confidence 359999999998776543
No 422
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=48.00 E-value=7.4 Score=25.61 Aligned_cols=18 Identities=22% Similarity=0.159 Sum_probs=14.4
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+|+|||-+...++.
T Consensus 34 lvG~~g~GKStlin~l~g 51 (239)
T 3lxx_A 34 LVGKTGAGKSATGNSILG 51 (239)
T ss_dssp EECCTTSSHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHcC
Confidence 359999999988877654
No 423
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=47.96 E-value=6 Score=24.72 Aligned_cols=17 Identities=24% Similarity=0.319 Sum_probs=13.6
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+-|.+|+|||-+.+.++
T Consensus 7 ivG~~gvGKStLl~~l~ 23 (184)
T 2zej_A 7 IVGNTGSGKTTLLQQLM 23 (184)
T ss_dssp EESCTTSSHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHh
Confidence 35999999998877654
No 424
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=47.96 E-value=7.7 Score=28.40 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=17.8
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
++|++|+|||-.+..++..++.
T Consensus 79 I~G~pGsGKTtlal~la~~~~~ 100 (366)
T 1xp8_A 79 IYGPESGGKTTLALAIVAQAQK 100 (366)
T ss_dssp EEESTTSSHHHHHHHHHHHHHH
T ss_pred EEcCCCCChHHHHHHHHHHHHH
Confidence 4799999999999887776543
No 425
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=47.81 E-value=5 Score=33.63 Aligned_cols=17 Identities=24% Similarity=0.262 Sum_probs=15.3
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|||||...+.++
T Consensus 655 I~G~nGSGKSTLl~~ll 671 (972)
T 2r6f_A 655 VTGVSGSGKSTLVNEVL 671 (972)
T ss_dssp CCBCTTSSHHHHHTTTH
T ss_pred EEcCCCCCHHHHHHHHH
Confidence 57999999999999865
No 426
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=47.69 E-value=10 Score=24.39 Aligned_cols=23 Identities=17% Similarity=0.154 Sum_probs=19.5
Q ss_pred CCCcCCchHHHHHHHHHHHhhhc
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~~ 24 (80)
.||.|.|||-++--+..+|+...
T Consensus 6 s~kGGvGKTt~a~~LA~~la~~g 28 (254)
T 3kjh_A 6 AGKGGVGKTTVAAGLIKIMASDY 28 (254)
T ss_dssp ECSSSHHHHHHHHHHHHHHTTTC
T ss_pred ecCCCCCHHHHHHHHHHHHHHCC
Confidence 58999999999999988887653
No 427
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=47.57 E-value=8.7 Score=22.78 Aligned_cols=17 Identities=18% Similarity=0.190 Sum_probs=13.1
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-....++
T Consensus 6 v~G~~~~GKSsli~~l~ 22 (161)
T 2dyk_A 6 IVGRPNVGKSSLFNRLL 22 (161)
T ss_dssp EECCTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHh
Confidence 35999999998766554
No 428
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=47.46 E-value=4 Score=34.61 Aligned_cols=19 Identities=21% Similarity=0.189 Sum_probs=16.9
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|+||+|||-+.+++++++
T Consensus 450 vG~sGsGKSTll~ll~~~~ 468 (1321)
T 4f4c_A 450 VGSSGCGKSTIISLLLRYY 468 (1321)
T ss_dssp EECSSSCHHHHHHHHTTSS
T ss_pred EecCCCcHHHHHHHhcccc
Confidence 5999999999999998864
No 429
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=46.96 E-value=7.1 Score=27.27 Aligned_cols=16 Identities=19% Similarity=0.110 Sum_probs=13.2
Q ss_pred CCCcCCchHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVL 17 (80)
Q Consensus 2 aG~sg~gKte~~k~~l 17 (80)
.|+||+|||-+-+.+.
T Consensus 175 ~G~sG~GKSTll~~l~ 190 (301)
T 1u0l_A 175 AGLSGVGKSSLLNAIN 190 (301)
T ss_dssp ECSTTSSHHHHHHHHS
T ss_pred ECCCCCcHHHHHHHhc
Confidence 5999999998877664
No 430
>4ddu_A Reverse gyrase; topoisomerase, DNA supercoiling, archaea, helicase, hydrolas; 3.00A {Thermotoga maritima} PDB: 4ddt_A 4ddv_A 4ddw_A 4ddx_A
Probab=46.93 E-value=10 Score=31.69 Aligned_cols=20 Identities=30% Similarity=0.288 Sum_probs=14.8
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.++||+|||++.-+++.+++
T Consensus 99 ~ApTGSGKTl~~l~~il~~~ 118 (1104)
T 4ddu_A 99 VAPTGVGKTTFGMMTALWLA 118 (1104)
T ss_dssp CCSTTCCHHHHHHHHHHHHH
T ss_pred EeCCCCcHHHHHHHHHHHHH
Confidence 57899999996656655544
No 431
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=46.82 E-value=12 Score=28.32 Aligned_cols=19 Identities=21% Similarity=0.144 Sum_probs=16.3
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++-+...+
T Consensus 221 ~GPPGtGKTllAkAiA~e~ 239 (437)
T 4b4t_L 221 YGPPGTGKTLLAKAVAATI 239 (437)
T ss_dssp ESCTTSSHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHh
Confidence 4999999999999887654
No 432
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=46.69 E-value=9.5 Score=27.35 Aligned_cols=21 Identities=19% Similarity=0.172 Sum_probs=17.9
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|.+|+|||-+-..++.++.
T Consensus 79 lvG~pgaGKSTLln~L~~~~~ 99 (349)
T 2www_A 79 LSGPPGAGKSTFIEYFGKMLT 99 (349)
T ss_dssp EECCTTSSHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHhh
Confidence 469999999999998887664
No 433
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=46.68 E-value=9.4 Score=29.90 Aligned_cols=17 Identities=12% Similarity=0.012 Sum_probs=14.7
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|++|||||-.-+++.-
T Consensus 109 vGpNGaGKSTLLkiL~G 125 (608)
T 3j16_B 109 VGTNGIGKSTALKILAG 125 (608)
T ss_dssp ECCTTSSHHHHHHHHHT
T ss_pred ECCCCChHHHHHHHHhc
Confidence 49999999999998754
No 434
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=46.55 E-value=7.7 Score=22.83 Aligned_cols=17 Identities=12% Similarity=0.313 Sum_probs=13.0
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-+...++
T Consensus 8 v~G~~~~GKssl~~~l~ 24 (166)
T 2ce2_X 8 VVGAGGVGKSALTIQLI 24 (166)
T ss_dssp EEESTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 35899999998866554
No 435
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=46.54 E-value=12 Score=28.25 Aligned_cols=19 Identities=16% Similarity=-0.015 Sum_probs=16.1
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++-+...+
T Consensus 221 yGPPGTGKTllAkAiA~e~ 239 (434)
T 4b4t_M 221 YGPPGTGKTLLARACAAQT 239 (434)
T ss_dssp ESCTTSSHHHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHHHHh
Confidence 4999999999999887654
No 436
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=46.51 E-value=11 Score=25.46 Aligned_cols=21 Identities=19% Similarity=0.042 Sum_probs=18.3
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
-|..|+|||-..+.+..+|-.
T Consensus 11 eG~~g~GKst~~~~l~~~l~~ 31 (216)
T 3tmk_A 11 EGLDRTGKTTQCNILYKKLQP 31 (216)
T ss_dssp EECSSSSHHHHHHHHHHHHCS
T ss_pred ECCCCCCHHHHHHHHHHHhcc
Confidence 488999999999999998853
No 437
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=46.37 E-value=6.1 Score=29.54 Aligned_cols=18 Identities=17% Similarity=0.241 Sum_probs=14.5
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|++|+|||-+-+.++.
T Consensus 36 lvG~sGaGKSTLln~L~g 53 (418)
T 2qag_C 36 VVGESGLGKSTLINSLFL 53 (418)
T ss_dssp EECCTTSSHHHHHHHHTT
T ss_pred EECCCCCcHHHHHHHHhC
Confidence 359999999998877654
No 438
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=46.28 E-value=3.1 Score=35.28 Aligned_cols=19 Identities=11% Similarity=0.067 Sum_probs=16.8
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|+||||||-+.+++++++
T Consensus 1111 VG~SGsGKSTL~~lL~rl~ 1129 (1321)
T 4f4c_A 1111 VGPSGCGKSTVVALLERFY 1129 (1321)
T ss_dssp ECSTTSSTTSHHHHHTTSS
T ss_pred ECCCCChHHHHHHHHhcCc
Confidence 4999999999999998864
No 439
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=45.82 E-value=8.9 Score=22.68 Aligned_cols=17 Identities=29% Similarity=0.378 Sum_probs=12.9
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-+...++
T Consensus 9 v~G~~~~GKssl~~~l~ 25 (168)
T 1u8z_A 9 MVGSGGVGKSALTLQFM 25 (168)
T ss_dssp EECSTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 35999999998765543
No 440
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=45.79 E-value=9.3 Score=23.64 Aligned_cols=17 Identities=24% Similarity=0.327 Sum_probs=13.3
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-+...++
T Consensus 53 vvG~~g~GKSsll~~l~ 69 (193)
T 2ged_A 53 IAGPQNSGKTSLLTLLT 69 (193)
T ss_dssp EECCTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHh
Confidence 35999999998776554
No 441
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=45.77 E-value=9.4 Score=28.30 Aligned_cols=22 Identities=23% Similarity=0.380 Sum_probs=17.5
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|.|++|+|||-....++..++.
T Consensus 33 I~G~pGsGKTtL~Lq~~~~~~~ 54 (333)
T 3io5_A 33 LAGPSKSFKSNFGLTMVSSYMR 54 (333)
T ss_dssp EEESSSSSHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHh
Confidence 4799999999988777666554
No 442
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=45.52 E-value=10 Score=26.74 Aligned_cols=20 Identities=20% Similarity=0.270 Sum_probs=15.1
Q ss_pred CCCCcCCchHHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l 20 (80)
|-|++|+|||-+-.-|.--|
T Consensus 28 i~G~NGsGKS~lleAi~~~l 47 (339)
T 3qkt_A 28 IIGQNGSGKSSLLDAILVGL 47 (339)
T ss_dssp EECCTTSSHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHh
Confidence 35999999999987664333
No 443
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=45.21 E-value=8.8 Score=27.27 Aligned_cols=21 Identities=19% Similarity=0.327 Sum_probs=17.4
Q ss_pred CCCCcCCchHHHHHHHHHHHh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~ 21 (80)
+.|++|+|||-+...++..+.
T Consensus 61 i~G~~g~GKSTl~~~l~~~~~ 81 (341)
T 2p67_A 61 VTGTPGAGKSTFLEAFGMLLI 81 (341)
T ss_dssp EEECTTSCHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHH
Confidence 368999999999998877664
No 444
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=45.15 E-value=18 Score=23.68 Aligned_cols=22 Identities=18% Similarity=0.090 Sum_probs=19.2
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
.++.|.|||-++-.+..+|+..
T Consensus 9 s~kgGvGKTt~a~~LA~~la~~ 30 (260)
T 3q9l_A 9 SGKGGVGKTTSSAAIATGLAQK 30 (260)
T ss_dssp CSSTTSSHHHHHHHHHHHHHHT
T ss_pred CCCCCCcHHHHHHHHHHHHHhC
Confidence 5789999999999999888764
No 445
>2xau_A PRE-mRNA-splicing factor ATP-dependent RNA helica; hydrolase, ribosome biogenesis, ATPase, ATP-binding, OB-fold; HET: ADP; 1.90A {Saccharomyces cerevisiae} PDB: 3kx2_B*
Probab=45.13 E-value=8 Score=30.96 Aligned_cols=16 Identities=25% Similarity=0.102 Sum_probs=11.8
Q ss_pred CCCCcCCchHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVV 16 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~ 16 (80)
+.|+||+|||.....+
T Consensus 114 i~gpTGSGKTtllp~l 129 (773)
T 2xau_A 114 FVGETGSGKTTQIPQF 129 (773)
T ss_dssp EECCTTSSHHHHHHHH
T ss_pred EECCCCCCHHHHHHHH
Confidence 3689999999944433
No 446
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=44.79 E-value=12 Score=28.89 Aligned_cols=21 Identities=14% Similarity=0.287 Sum_probs=18.4
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
-|-+|||||-+.+.+.+.|-.
T Consensus 401 ~GlsGsGKSTIa~~La~~L~~ 421 (511)
T 1g8f_A 401 GNSLTVSREQLSIALLSTFLQ 421 (511)
T ss_dssp CTTCCSCHHHHHHHHHHHHTT
T ss_pred cccCCCCHHHHHHHHHHHHHH
Confidence 589999999999999888753
No 447
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=44.75 E-value=10 Score=22.61 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=13.3
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-....++
T Consensus 11 v~G~~~~GKSsli~~l~ 27 (170)
T 1z0j_A 11 LLGDTGVGKSSIMWRFV 27 (170)
T ss_dssp EECCTTSSHHHHHHHHH
T ss_pred EECcCCCCHHHHHHHHH
Confidence 35999999998776554
No 448
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=44.68 E-value=9.5 Score=22.68 Aligned_cols=17 Identities=18% Similarity=0.237 Sum_probs=13.2
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+++|||-....++
T Consensus 8 v~G~~~~GKssli~~l~ 24 (167)
T 1c1y_A 8 VLGSGGVGKSALTVQFV 24 (167)
T ss_dssp EECSTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 35999999998766554
No 449
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=44.53 E-value=7.2 Score=29.18 Aligned_cols=17 Identities=24% Similarity=0.169 Sum_probs=14.6
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
.|++|+|||-.-+.++-
T Consensus 75 vG~nGaGKSTLln~L~G 91 (413)
T 1tq4_A 75 TGETGSGKSSFINTLRG 91 (413)
T ss_dssp EECTTSSHHHHHHHHHT
T ss_pred ECCCCCcHHHHHHHHhC
Confidence 59999999999887754
No 450
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=44.52 E-value=10 Score=29.16 Aligned_cols=20 Identities=15% Similarity=0.215 Sum_probs=17.4
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.|.+|+|||-+.+.+.+.|-
T Consensus 378 ~G~~GsGKSTia~~La~~L~ 397 (546)
T 2gks_A 378 TGLPCAGKSTIAEILATMLQ 397 (546)
T ss_dssp ECSTTSSHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHhh
Confidence 58999999999999888764
No 451
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=44.52 E-value=4 Score=29.19 Aligned_cols=16 Identities=19% Similarity=0.019 Sum_probs=13.7
Q ss_pred CCCcCCchHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVL 17 (80)
Q Consensus 2 aG~sg~gKte~~k~~l 17 (80)
-|++|||||-+-+.|.
T Consensus 66 vG~NGaGKStLl~aI~ 81 (415)
T 4aby_A 66 TGETGAGKSIIVDALG 81 (415)
T ss_dssp EESHHHHHHHHTHHHH
T ss_pred ECCCCCCHHHHHHHHH
Confidence 5999999999988763
No 452
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=44.40 E-value=18 Score=24.03 Aligned_cols=20 Identities=10% Similarity=0.014 Sum_probs=17.8
Q ss_pred CCCcCCchHHHHHHHHHHHh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLL 21 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~ 21 (80)
.+|.|.|||-++--+...|+
T Consensus 34 s~kGGvGKTT~a~~LA~~la 53 (267)
T 3k9g_A 34 SIKGGVGKSTSAIILATLLS 53 (267)
T ss_dssp CSSSSSCHHHHHHHHHHHHT
T ss_pred eCCCCchHHHHHHHHHHHHH
Confidence 68999999999998888887
No 453
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=44.28 E-value=10 Score=22.84 Aligned_cols=17 Identities=18% Similarity=0.159 Sum_probs=13.2
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-+...++
T Consensus 13 v~G~~~~GKSsli~~l~ 29 (182)
T 1ky3_A 13 ILGDSGVGKTSLMHRYV 29 (182)
T ss_dssp EECCTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 35999999998776554
No 454
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=44.23 E-value=7.7 Score=23.80 Aligned_cols=17 Identities=12% Similarity=0.225 Sum_probs=13.1
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-+...++
T Consensus 28 v~G~~~~GKSsli~~l~ 44 (195)
T 3pqc_A 28 FVGRSNVGKSSLLNALF 44 (195)
T ss_dssp EEEBTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 35899999998776553
No 455
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=44.19 E-value=9.6 Score=23.42 Aligned_cols=17 Identities=12% Similarity=-0.029 Sum_probs=13.8
Q ss_pred CCCcCCchHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~ 18 (80)
-|.+|+|||-+.+.++.
T Consensus 13 vG~~gvGKStL~~~l~~ 29 (188)
T 2wjg_A 13 IGNPNVGKSTIFNALTG 29 (188)
T ss_dssp ECSTTSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHhC
Confidence 59999999988876643
No 456
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=44.14 E-value=9.6 Score=22.68 Aligned_cols=17 Identities=18% Similarity=0.194 Sum_probs=13.1
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-....++
T Consensus 8 v~G~~~~GKssli~~l~ 24 (172)
T 2erx_A 8 VFGAGGVGKSSLVLRFV 24 (172)
T ss_dssp EECCTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 35999999998766543
No 457
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=44.03 E-value=11 Score=26.77 Aligned_cols=22 Identities=14% Similarity=0.101 Sum_probs=17.9
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
+.|..|+|||-+..-+..++..
T Consensus 84 i~G~~G~GKSTl~~~L~~~l~~ 105 (355)
T 3p32_A 84 ITGVPGVGKSTAIEALGMHLIE 105 (355)
T ss_dssp EECCTTSSHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHh
Confidence 4699999999998888777643
No 458
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=43.95 E-value=17 Score=24.53 Aligned_cols=21 Identities=24% Similarity=0.170 Sum_probs=18.1
Q ss_pred CcCCchHHHHHHHHHHHhhhc
Q psy17057 4 STMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 4 ~sg~gKte~~k~~l~~l~~~~ 24 (80)
.|++|||.++--+++.|....
T Consensus 13 ~t~vGKT~vt~~L~~~l~~~G 33 (228)
T 3of5_A 13 DTEVGKTYISTKLIEVCEHQN 33 (228)
T ss_dssp SSSSCHHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHCC
Confidence 589999999999999987654
No 459
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=43.94 E-value=9.8 Score=28.08 Aligned_cols=19 Identities=21% Similarity=0.212 Sum_probs=15.7
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.|++|+|||..+..+...
T Consensus 128 I~GpPGsGKTtLAlqlA~~ 146 (331)
T 2vhj_A 128 VTGKGNSGKTPLVHALGEA 146 (331)
T ss_dssp EECSCSSSHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHh
Confidence 4699999999998877653
No 460
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=43.78 E-value=11 Score=22.27 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=12.3
Q ss_pred CCCCcCCchHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVV 16 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~ 16 (80)
+.|.+++|||-....+
T Consensus 8 v~G~~~~GKSsli~~l 23 (167)
T 1kao_A 8 VLGSGGVGKSALTVQF 23 (167)
T ss_dssp EECCTTSSHHHHHHHH
T ss_pred EECCCCCCHHHHHHHH
Confidence 3599999999875544
No 461
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=43.71 E-value=11 Score=22.39 Aligned_cols=17 Identities=18% Similarity=0.290 Sum_probs=13.2
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-+...++
T Consensus 8 v~G~~~~GKssli~~l~ 24 (170)
T 1ek0_A 8 LLGEAAVGKSSIVLRFV 24 (170)
T ss_dssp EECSTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHh
Confidence 35999999998866554
No 462
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=43.64 E-value=15 Score=27.71 Aligned_cols=19 Identities=21% Similarity=0.023 Sum_probs=16.0
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++-+...+
T Consensus 188 ~GPPGTGKTllAkAiA~e~ 206 (405)
T 4b4t_J 188 YGPPGTGKTLLARAVAHHT 206 (405)
T ss_dssp ESCSSSSHHHHHHHHHHHH
T ss_pred eCCCCCCHHHHHHHHHHhh
Confidence 4999999999999886654
No 463
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=43.57 E-value=14 Score=24.43 Aligned_cols=22 Identities=18% Similarity=0.110 Sum_probs=19.0
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
.++.|.|||-++-.+..+|+..
T Consensus 9 s~kgGvGKTt~a~~LA~~la~~ 30 (263)
T 1hyq_A 9 SGKGGTGKTTITANLGVALAQL 30 (263)
T ss_dssp ESSSCSCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhC
Confidence 5789999999999998888764
No 464
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=43.56 E-value=13 Score=28.88 Aligned_cols=19 Identities=16% Similarity=0.099 Sum_probs=15.8
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+-|++|||||-.-+.++-.
T Consensus 50 IvG~nGsGKSTLL~~I~Gl 68 (608)
T 3szr_A 50 VIGDQSSGKSSVLEALSGV 68 (608)
T ss_dssp CCCCTTSCHHHHHHHHHSC
T ss_pred EECCCCChHHHHHHHHhCC
Confidence 4699999999998888653
No 465
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=43.54 E-value=6.9 Score=27.45 Aligned_cols=16 Identities=13% Similarity=0.154 Sum_probs=13.8
Q ss_pred CCCcCCchHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVL 17 (80)
Q Consensus 2 aG~sg~gKte~~k~~l 17 (80)
-|++|+|||-+-+.+.
T Consensus 24 vG~nG~GKSTLl~~L~ 39 (301)
T 2qnr_A 24 VGESGLGKSTLINSLF 39 (301)
T ss_dssp EEETTSSHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHh
Confidence 5999999999888764
No 466
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=42.75 E-value=10 Score=25.66 Aligned_cols=19 Identities=16% Similarity=0.085 Sum_probs=15.8
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.|+.|.|||...+.++..
T Consensus 36 i~G~~G~GKT~Ll~~~~~~ 54 (350)
T 2qen_A 36 LLGIRRVGKSSLLRAFLNE 54 (350)
T ss_dssp EECCTTSSHHHHHHHHHHH
T ss_pred EECCCcCCHHHHHHHHHHH
Confidence 3599999999998887664
No 467
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=42.63 E-value=11 Score=22.68 Aligned_cols=17 Identities=12% Similarity=0.073 Sum_probs=13.2
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-+...++
T Consensus 12 v~G~~~~GKSsli~~l~ 28 (177)
T 1wms_A 12 LLGDGGVGKSSLMNRYV 28 (177)
T ss_dssp EECCTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 35999999998766554
No 468
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=42.26 E-value=11 Score=24.44 Aligned_cols=18 Identities=22% Similarity=0.128 Sum_probs=13.5
Q ss_pred CCCcCCchHHHH-HHHHHH
Q psy17057 2 AGSTMRDKTPFK-LVVLLV 19 (80)
Q Consensus 2 aG~sg~gKte~~-k~~l~~ 19 (80)
.|..|+|||... +++.++
T Consensus 9 ~G~~gsGKTT~ll~~~~~~ 27 (184)
T 2orw_A 9 TGPMYSGKTTELLSFVEIY 27 (184)
T ss_dssp EESTTSSHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHH
Confidence 588999999987 444444
No 469
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A
Probab=42.21 E-value=12 Score=28.86 Aligned_cols=22 Identities=18% Similarity=0.194 Sum_probs=18.1
Q ss_pred CCCCcCCchHHHHHHHHHHHhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~ 22 (80)
|-|..|.|||.+..-++.+|+.
T Consensus 200 i~GppGTGKT~~~~~~i~~l~~ 221 (624)
T 2gk6_A 200 IQGPPGTGKTVTSATIVYHLAR 221 (624)
T ss_dssp EECCTTSCHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHH
Confidence 3589999999988888887764
No 470
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=42.07 E-value=5.1 Score=33.63 Aligned_cols=17 Identities=18% Similarity=0.237 Sum_probs=15.1
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|||||...+.++
T Consensus 673 I~G~nGSGKSTLl~~il 689 (993)
T 2ygr_A 673 VTGVSGSGKSTLVNDIL 689 (993)
T ss_dssp EECSTTSSHHHHHTTTH
T ss_pred EEcCCCCCHHHHHHHHH
Confidence 47999999999999875
No 471
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=41.52 E-value=10 Score=28.97 Aligned_cols=19 Identities=11% Similarity=0.043 Sum_probs=15.7
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||.+++.+-..+
T Consensus 47 ~GpPGtGKT~LAraLa~~l 65 (500)
T 3nbx_X 47 LGPPGIAKSLIARRLKFAF 65 (500)
T ss_dssp ECCSSSSHHHHHHHGGGGB
T ss_pred ecCchHHHHHHHHHHHHHH
Confidence 5999999999999875543
No 472
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=41.51 E-value=12 Score=22.30 Aligned_cols=17 Identities=24% Similarity=0.204 Sum_probs=13.1
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-+...++
T Consensus 11 v~G~~~~GKssli~~l~ 27 (170)
T 1z08_A 11 LLGEGCVGKTSLVLRYC 27 (170)
T ss_dssp EECCTTSCHHHHHHHHH
T ss_pred EECcCCCCHHHHHHHHH
Confidence 35999999998776553
No 473
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=41.40 E-value=12 Score=22.74 Aligned_cols=17 Identities=12% Similarity=0.335 Sum_probs=13.2
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-+...++
T Consensus 9 v~G~~~~GKSsli~~l~ 25 (189)
T 4dsu_A 9 VVGADGVGKSALTIQLI 25 (189)
T ss_dssp EECCTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 36999999998766554
No 474
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=41.38 E-value=10 Score=27.90 Aligned_cols=18 Identities=22% Similarity=0.194 Sum_probs=14.6
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+|+|||-+-+.++-
T Consensus 220 lvG~sG~GKSTLln~L~g 237 (358)
T 2rcn_A 220 FAGQSGVGKSSLLNALLG 237 (358)
T ss_dssp EECCTTSSHHHHHHHHHC
T ss_pred EECCCCccHHHHHHHHhc
Confidence 359999999988887754
No 475
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=41.27 E-value=14 Score=28.45 Aligned_cols=23 Identities=13% Similarity=-0.008 Sum_probs=18.8
Q ss_pred CCCCcCCchHHHHHHHHHHHhhh
Q psy17057 1 MAGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~l~~~ 23 (80)
|+|.+|+|||-+..-+..+|...
T Consensus 106 ivG~~GvGKTTl~~kLA~~l~~~ 128 (504)
T 2j37_W 106 FVGLQGSGKTTTCSKLAYYYQRK 128 (504)
T ss_dssp EECSTTSSHHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHHhC
Confidence 46899999999988888877643
No 476
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=41.27 E-value=12 Score=29.66 Aligned_cols=19 Identities=21% Similarity=0.188 Sum_probs=17.3
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
.|-+|||||-+.+.+-+.|
T Consensus 58 tGlsGSGKSTlAr~La~~L 76 (630)
T 1x6v_B 58 TGLSGAGKTTVSMALEEYL 76 (630)
T ss_dssp ECSTTSSHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHH
Confidence 5889999999999998887
No 477
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=41.01 E-value=12 Score=29.19 Aligned_cols=16 Identities=19% Similarity=0.156 Sum_probs=14.0
Q ss_pred CCCcCCchHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVL 17 (80)
Q Consensus 2 aG~sg~gKte~~k~~l 17 (80)
-|++|||||-.-+++.
T Consensus 123 iG~NGsGKSTLlkiL~ 138 (607)
T 3bk7_A 123 VGPNGTGKTTAVKILA 138 (607)
T ss_dssp ECCTTSSHHHHHHHHT
T ss_pred ECCCCChHHHHHHHHh
Confidence 4999999999998874
No 478
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=40.93 E-value=14 Score=29.59 Aligned_cols=21 Identities=14% Similarity=0.036 Sum_probs=18.3
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
-|++|.|||-+.+.+.+.+..
T Consensus 197 ~G~pG~GKT~la~~la~~l~~ 217 (854)
T 1qvr_A 197 IGEPGVGKTAIVEGLAQRIVK 217 (854)
T ss_dssp EECTTSCHHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHHhc
Confidence 499999999999999888754
No 479
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=40.88 E-value=12 Score=23.68 Aligned_cols=18 Identities=22% Similarity=0.285 Sum_probs=13.9
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+|+|||-+...++.
T Consensus 17 ~~G~~g~GKTsl~~~l~~ 34 (218)
T 1nrj_B 17 IAGPQNSGKTSLLTLLTT 34 (218)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHhc
Confidence 359999999988776544
No 480
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=40.79 E-value=11 Score=22.78 Aligned_cols=18 Identities=11% Similarity=0.222 Sum_probs=13.6
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+|+|||-+...++.
T Consensus 14 v~G~~~~GKssli~~l~~ 31 (181)
T 2fn4_A 14 VVGGGGVGKSALTIQFIQ 31 (181)
T ss_dssp EEECTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHh
Confidence 358999999987765543
No 481
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=40.75 E-value=21 Score=27.35 Aligned_cols=21 Identities=10% Similarity=-0.040 Sum_probs=18.1
Q ss_pred CCCcCCchHHHHHHHHHHHhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~ 22 (80)
-|.+|+|||.+.+.+.+++..
T Consensus 180 vG~sG~GKTtLl~~Iar~i~~ 200 (422)
T 3ice_A 180 VAPPKAGKTMLLQNIAQSIAY 200 (422)
T ss_dssp ECCSSSSHHHHHHHHHHHHHH
T ss_pred ecCCCCChhHHHHHHHHHHhh
Confidence 488999999999999888754
No 482
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=40.75 E-value=9.7 Score=23.63 Aligned_cols=18 Identities=17% Similarity=0.132 Sum_probs=13.8
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+|+|||-+-+.+..
T Consensus 9 ivG~~g~GKStLl~~l~~ 26 (172)
T 2gj8_A 9 IAGRPNAGKSSLLNALAG 26 (172)
T ss_dssp EEESTTSSHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHhC
Confidence 359999999987776643
No 483
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=40.57 E-value=13 Score=22.03 Aligned_cols=17 Identities=18% Similarity=0.327 Sum_probs=13.1
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+++|||-+...++
T Consensus 11 v~G~~~~GKssli~~l~ 27 (170)
T 1r2q_A 11 LLGESAVGKSSLVLRFV 27 (170)
T ss_dssp EECSTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 35999999998766554
No 484
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=40.54 E-value=12 Score=22.49 Aligned_cols=16 Identities=19% Similarity=0.229 Sum_probs=12.6
Q ss_pred CCCCcCCchHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVV 16 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~ 16 (80)
+.|.+|+|||-+...+
T Consensus 9 i~G~~~vGKSsl~~~l 24 (175)
T 2nzj_A 9 LLGDPGVGKTSLASLF 24 (175)
T ss_dssp EECCTTSSHHHHHHHH
T ss_pred EECCCCccHHHHHHHH
Confidence 3599999999876654
No 485
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=40.40 E-value=5.6 Score=33.60 Aligned_cols=19 Identities=11% Similarity=0.076 Sum_probs=16.4
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|+||||||-..++++..+
T Consensus 422 vG~sGsGKSTl~~ll~g~~ 440 (1284)
T 3g5u_A 422 VGNSGCGKSTTVQLMQRLY 440 (1284)
T ss_dssp ECCSSSSHHHHHHHTTTSS
T ss_pred ECCCCCCHHHHHHHHhCCC
Confidence 5999999999999987754
No 486
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=40.28 E-value=13 Score=22.17 Aligned_cols=16 Identities=19% Similarity=0.133 Sum_probs=12.7
Q ss_pred CCCCcCCchHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVV 16 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~ 16 (80)
+.|.+++|||-+...+
T Consensus 12 v~G~~~~GKssl~~~l 27 (171)
T 1upt_A 12 ILGLDGAGKTTILYRL 27 (171)
T ss_dssp EECSTTSSHHHHHHHH
T ss_pred EECCCCCCHHHHHHHH
Confidence 3599999999876655
No 487
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=40.09 E-value=24 Score=23.97 Aligned_cols=23 Identities=13% Similarity=0.098 Sum_probs=19.5
Q ss_pred CCCcCCchHHHHHHHHHHHhhhc
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~~ 24 (80)
.+|.|.|||-++-.+..+|+...
T Consensus 11 s~KGGvGKTT~a~nLA~~La~~G 33 (286)
T 2xj4_A 11 NEKGGAGKSTIAVHLVTALLYGG 33 (286)
T ss_dssp CSSSCTTHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHHHHHHHHCC
Confidence 57999999999999988887653
No 488
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=40.08 E-value=13 Score=22.04 Aligned_cols=18 Identities=28% Similarity=0.268 Sum_probs=13.9
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
+.|.+++|||-....++.
T Consensus 5 ~~G~~~~GKssl~~~l~~ 22 (164)
T 1r8s_A 5 MVGLDAAGKTTILYKLKL 22 (164)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHc
Confidence 359999999998776543
No 489
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=39.91 E-value=12 Score=22.54 Aligned_cols=16 Identities=19% Similarity=0.227 Sum_probs=12.6
Q ss_pred CCCCcCCchHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVV 16 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~ 16 (80)
+.|.+|+|||-+...+
T Consensus 13 v~G~~~~GKssl~~~l 28 (178)
T 2lkc_A 13 IMGHVDHGKTTLLDAI 28 (178)
T ss_dssp EESCTTTTHHHHHHHH
T ss_pred EECCCCCCHHHHHHHH
Confidence 3599999999876654
No 490
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=39.71 E-value=20 Score=23.96 Aligned_cols=22 Identities=9% Similarity=0.129 Sum_probs=18.8
Q ss_pred CCCcCCchHHHHHHHHHHHhhh
Q psy17057 2 AGSTMRDKTPFKLVVLLVLLHE 23 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l~~~ 23 (80)
.+|.|.|||-++--+..+|+..
T Consensus 25 s~kGGvGKTT~a~nLA~~la~~ 46 (262)
T 2ph1_A 25 SGKGGVGKSTVTALLAVHYARQ 46 (262)
T ss_dssp CSSSCTTHHHHHHHHHHHHHHT
T ss_pred cCCCCCCHHHHHHHHHHHHHHC
Confidence 5789999999999888888764
No 491
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=39.69 E-value=19 Score=24.87 Aligned_cols=19 Identities=11% Similarity=-0.043 Sum_probs=16.2
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|..||||+-.++.+...+
T Consensus 14 ~G~pGsGKsT~a~~L~~~~ 32 (230)
T 3gmt_A 14 LGAPGAGKGTQANFIKEKF 32 (230)
T ss_dssp ECCTTSCHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHh
Confidence 5899999999999887754
No 492
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=39.54 E-value=13 Score=22.75 Aligned_cols=17 Identities=12% Similarity=0.253 Sum_probs=13.2
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+++|||-+...++
T Consensus 23 v~G~~~~GKSsl~~~l~ 39 (183)
T 3kkq_A 23 VVGDGGVGKSALTIQFF 39 (183)
T ss_dssp EECSTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHH
Confidence 35999999998766554
No 493
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=39.43 E-value=13 Score=22.54 Aligned_cols=17 Identities=29% Similarity=0.378 Sum_probs=12.9
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-+...++
T Consensus 23 v~G~~~~GKSsli~~l~ 39 (187)
T 2a9k_A 23 MVGSGGVGKSALTLQFM 39 (187)
T ss_dssp EECSTTSSHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHh
Confidence 35999999998765543
No 494
>2whx_A Serine protease/ntpase/helicase NS3; transcription, hydrolase, ATP-binding, reticulum, nucleotidyltransferase, multifunctional enzyme; HET: ADP; 2.20A {Dengue virus 4} PDB: 2vbc_A 2wzq_A
Probab=39.43 E-value=9.3 Score=29.75 Aligned_cols=21 Identities=14% Similarity=-0.126 Sum_probs=14.9
Q ss_pred CCCcCCchHHHH-HHHHHHHhh
Q psy17057 2 AGSTMRDKTPFK-LVVLLVLLH 22 (80)
Q Consensus 2 aG~sg~gKte~~-k~~l~~l~~ 22 (80)
.++||+|||.+. --++..+..
T Consensus 192 ~a~TGSGKT~~~~lpil~~l~~ 213 (618)
T 2whx_A 192 DLHPGAGKTKRILPSIVREALK 213 (618)
T ss_dssp CCCTTSSTTTTHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHHHHh
Confidence 689999999985 445555443
No 495
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=39.35 E-value=13 Score=26.74 Aligned_cols=19 Identities=11% Similarity=0.099 Sum_probs=15.7
Q ss_pred CCCCcCCchHHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLLV 19 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~~ 19 (80)
+.||+|.||+.+++++-.+
T Consensus 157 i~GesGtGKe~lAr~ih~~ 175 (368)
T 3dzd_A 157 ITGESGTGKEIVARLIHRY 175 (368)
T ss_dssp EECCTTSSHHHHHHHHHHH
T ss_pred EEeCCCchHHHHHHHHHHh
Confidence 3599999999999988544
No 496
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=39.02 E-value=21 Score=24.54 Aligned_cols=21 Identities=14% Similarity=-0.083 Sum_probs=18.2
Q ss_pred CcCCchHHHHHHHHHHHhhhc
Q psy17057 4 STMRDKTPFKLVVLLVLLHED 24 (80)
Q Consensus 4 ~sg~gKte~~k~~l~~l~~~~ 24 (80)
.|++|||.++--+++.|....
T Consensus 30 ~t~vGKT~vs~gL~~~L~~~G 50 (242)
T 3qxc_A 30 NTNAGKTTCARLLAQYCNACG 50 (242)
T ss_dssp STTSSHHHHHHHHHHHHHHTT
T ss_pred CCCCcHHHHHHHHHHHHHhCC
Confidence 589999999999999987643
No 497
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=38.86 E-value=19 Score=27.77 Aligned_cols=19 Identities=21% Similarity=-0.045 Sum_probs=15.8
Q ss_pred CCCcCCchHHHHHHHHHHH
Q psy17057 2 AGSTMRDKTPFKLVVLLVL 20 (80)
Q Consensus 2 aG~sg~gKte~~k~~l~~l 20 (80)
-|++|.|||-+++.+...+
T Consensus 249 yGPPGTGKTlLAkAiA~e~ 267 (467)
T 4b4t_H 249 YGPPGTGKTLCARAVANRT 267 (467)
T ss_dssp CSCTTSSHHHHHHHHHHHH
T ss_pred eCCCCCcHHHHHHHHHhcc
Confidence 5999999999999886643
No 498
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=38.71 E-value=12 Score=27.21 Aligned_cols=18 Identities=11% Similarity=0.163 Sum_probs=14.5
Q ss_pred CCCCcCCchHHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVLL 18 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l~ 18 (80)
|-|++|+|||-+-..|.-
T Consensus 31 i~G~nG~GKstll~ai~~ 48 (430)
T 1w1w_A 31 IIGPNGSGKSNMMDAISF 48 (430)
T ss_dssp EECSTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHh
Confidence 359999999999886643
No 499
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=38.53 E-value=14 Score=22.25 Aligned_cols=17 Identities=18% Similarity=0.128 Sum_probs=13.1
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+++|||-+...++
T Consensus 15 v~G~~~~GKssli~~l~ 31 (180)
T 2g6b_A 15 LVGDSGVGKTCLLVRFK 31 (180)
T ss_dssp EECSTTSSHHHHHHHHH
T ss_pred EECcCCCCHHHHHHHHH
Confidence 35999999998766543
No 500
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=38.42 E-value=12 Score=22.22 Aligned_cols=17 Identities=12% Similarity=0.167 Sum_probs=12.9
Q ss_pred CCCCcCCchHHHHHHHH
Q psy17057 1 MAGSTMRDKTPFKLVVL 17 (80)
Q Consensus 1 ~aG~sg~gKte~~k~~l 17 (80)
+.|.+|+|||-....++
T Consensus 8 v~G~~~~GKssli~~l~ 24 (170)
T 1g16_A 8 LIGDSGVGKSCLLVRFV 24 (170)
T ss_dssp EEESTTSSHHHHHHHHH
T ss_pred EECcCCCCHHHHHHHHH
Confidence 35899999998766553
Done!