Query psy17058
Match_columns 471
No_of_seqs 345 out of 3024
Neff 10.7
Searched_HMMs 29240
Date Fri Aug 16 20:48:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17058.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17058hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 3.5E-49 1.2E-53 398.2 41.3 427 37-470 5-542 (570)
2 1e07_A Carcinoembryonic antige 100.0 2.2E-43 7.5E-48 361.6 45.4 433 14-469 81-611 (642)
3 3b43_A Titin; I-SET IG fold, e 100.0 3E-44 1E-48 362.2 38.3 376 89-470 3-448 (570)
4 3kld_A Contactin 4, axcam, BIG 100.0 2.4E-42 8.4E-47 331.2 29.4 330 89-470 3-355 (384)
5 3dmk_A DOWN syndrome cell adhe 100.0 1.9E-41 6.4E-46 356.7 37.6 379 37-470 343-781 (816)
6 2ec8_A MAST/stem cell growth f 100.0 2.5E-41 8.6E-46 337.9 35.2 360 36-453 35-447 (524)
7 1cs6_A Axonin-1; neural cell a 100.0 4E-41 1.4E-45 322.8 30.4 328 89-470 2-354 (382)
8 3laf_A Deleted in colorectal c 100.0 1.8E-40 6.3E-45 320.5 32.4 332 88-470 18-373 (403)
9 1e07_A Carcinoembryonic antige 100.0 2.3E-39 7.8E-44 331.8 42.0 410 41-470 3-528 (642)
10 2rcj_C Light chain; immunoglob 100.0 2.3E-39 7.7E-44 323.7 36.8 369 41-456 4-471 (523)
11 3p3y_A Neurofascin; IG domains 100.0 3.2E-40 1.1E-44 318.9 29.6 332 88-470 13-375 (404)
12 3dmk_A DOWN syndrome cell adhe 100.0 4.1E-40 1.4E-44 346.5 30.7 397 10-470 113-587 (816)
13 1bih_A Hemolin; insect immunit 100.0 4.7E-40 1.6E-44 316.7 27.3 329 89-470 4-368 (395)
14 2v5m_A Dscam; neurobiology SPL 100.0 1.5E-39 5.2E-44 312.5 29.6 325 90-470 2-361 (388)
15 3qs9_E FL cytokine receptor; i 100.0 1.5E-39 5.3E-44 322.5 29.1 343 45-453 56-448 (527)
16 3laf_A Deleted in colorectal c 100.0 2.4E-38 8.3E-43 305.6 31.5 326 36-365 20-402 (403)
17 2ocw_A Polymeric-immunoglobuli 100.0 1.2E-37 4E-42 315.7 37.8 372 41-470 4-517 (585)
18 3v2a_R Vascular endothelial gr 100.0 6.4E-41 2.2E-45 350.7 13.0 448 14-470 96-728 (772)
19 3qs7_E FL cytokine receptor; i 100.0 1.8E-38 6.1E-43 306.8 28.3 302 90-456 47-370 (423)
20 2ec8_A MAST/stem cell growth f 100.0 1.3E-37 4.3E-42 311.1 34.1 319 89-470 34-383 (524)
21 1z7z_I Intercellular adhesion 100.0 2.2E-38 7.4E-43 310.6 25.7 342 41-452 3-410 (450)
22 3kld_A Contactin 4, axcam, BIG 100.0 8.9E-38 3E-42 299.5 28.8 321 38-364 6-383 (384)
23 3p3y_A Neurofascin; IG domains 100.0 4.6E-37 1.6E-41 296.7 29.8 327 35-364 15-403 (404)
24 2rik_A Titin; I-SET IG fold, p 100.0 1.8E-36 6.3E-41 278.0 32.1 269 89-363 3-283 (284)
25 3qs9_E FL cytokine receptor; i 100.0 2.1E-37 7.2E-42 307.2 25.1 319 90-470 47-386 (527)
26 2v5m_A Dscam; neurobiology SPL 100.0 4.8E-36 1.6E-40 288.1 31.5 316 37-362 4-387 (388)
27 1cs6_A Axonin-1; neural cell a 100.0 3.8E-36 1.3E-40 288.1 27.6 318 37-363 4-381 (382)
28 1qz1_A Neural cell adhesion mo 100.0 6.6E-35 2.3E-39 268.6 32.6 270 91-364 2-290 (291)
29 2rcj_C Light chain; immunoglob 100.0 9.3E-36 3.2E-40 297.5 28.2 310 96-456 5-367 (523)
30 3v2a_R Vascular endothelial gr 100.0 3.4E-37 1.1E-41 322.6 18.4 410 40-454 34-591 (772)
31 1bih_A Hemolin; insect immunit 100.0 1.9E-35 6.5E-40 284.6 27.8 319 37-362 6-394 (395)
32 1qgc_4 Protein (immunoglobulin 100.0 3.4E-35 1.1E-39 286.9 26.3 318 93-455 3-388 (438)
33 2wim_A N-CAM 2, NCAM2, neural 100.0 1.3E-34 4.4E-39 266.7 28.3 271 90-366 3-286 (291)
34 1wio_A CD4, T-cell surface gly 100.0 1.9E-35 6.6E-40 281.1 23.3 272 100-456 3-327 (363)
35 3qs7_E FL cytokine receptor; i 100.0 7.4E-35 2.5E-39 281.5 27.5 315 41-366 52-416 (423)
36 2yd9_A Receptor-type tyrosine- 100.0 3.9E-34 1.3E-38 265.2 27.9 269 89-367 4-294 (304)
37 1z7z_I Intercellular adhesion 100.0 2.2E-34 7.5E-39 282.1 22.8 307 93-469 1-334 (450)
38 2ocw_A Polymeric-immunoglobuli 100.0 8.1E-33 2.8E-37 280.1 35.0 300 97-454 6-381 (585)
39 2o26_X MAST/stem cell growth f 100.0 4.2E-33 1.4E-37 256.5 25.8 262 89-366 10-290 (290)
40 1igt_B IGG2A intact antibody - 100.0 3.9E-33 1.3E-37 272.6 26.8 315 97-456 6-392 (444)
41 2y25_A Myomesin; structural pr 100.0 1.3E-33 4.3E-38 263.4 20.8 271 89-365 5-316 (317)
42 3ejj_X Macrophage colony-stimu 100.0 1E-32 3.5E-37 253.7 25.9 267 90-366 3-283 (289)
43 4fqp_A Poliovirus receptor; im 100.0 1.6E-32 5.5E-37 255.5 26.7 266 94-366 3-306 (313)
44 4fom_A Poliovirus receptor-rel 100.0 1.8E-33 6.2E-38 261.3 20.3 264 99-366 7-302 (308)
45 1ry7_B FGFR-3, fibroblast grow 100.0 2E-33 6.9E-38 264.1 16.4 270 92-366 10-329 (334)
46 1wio_A CD4, T-cell surface gly 100.0 3.6E-32 1.2E-36 258.5 24.2 281 45-362 2-361 (363)
47 2rik_A Titin; I-SET IG fold, p 100.0 1.6E-31 5.3E-36 245.2 27.2 243 179-470 4-256 (284)
48 1iga_A IGA1; immunoglobulin; N 100.0 2.6E-31 8.9E-36 261.8 30.1 315 94-456 4-396 (475)
49 2y23_A Myomesin; structural pr 100.0 5.4E-32 1.8E-36 251.7 23.0 260 99-363 9-311 (312)
50 1hzh_H IGG, immunoglobulin hea 100.0 2.3E-32 7.8E-37 268.1 21.1 315 97-457 6-402 (457)
51 1itb_B Type 1 interleukin-1 re 100.0 3E-32 1E-36 253.9 19.8 263 99-364 13-314 (315)
52 3oq3_B IFN-alpha/beta binding 100.0 2.3E-31 7.7E-36 249.4 25.7 258 99-363 37-329 (329)
53 3rjd_A High affinity immunoglo 100.0 2.7E-31 9.4E-36 240.4 24.5 247 91-362 1-260 (262)
54 1igy_B IGG1 intact antibody MA 100.0 2.5E-33 8.4E-38 273.2 10.3 314 97-456 5-382 (434)
55 4dkd_C Macrophage colony-stimu 100.0 8.7E-32 3E-36 247.9 19.6 268 90-366 3-283 (292)
56 3u83_A Poliovirus receptor-rel 100.0 4.4E-31 1.5E-35 247.8 24.1 266 93-366 16-322 (331)
57 3o4o_C Interleukin-1 receptor 100.0 3.9E-32 1.3E-36 255.9 14.3 273 89-364 16-335 (339)
58 4dep_C Interleukin-1 receptor 100.0 3.8E-31 1.3E-35 250.1 20.7 263 98-365 14-334 (349)
59 3mjg_X Beta-type platelet-deri 100.0 7.2E-31 2.5E-35 241.4 21.6 261 92-367 1-281 (289)
60 2yd9_A Receptor-type tyrosine- 100.0 2.2E-30 7.4E-35 240.0 24.0 244 179-470 5-265 (304)
61 3vh8_G Killer cell immunoglobu 100.0 4.9E-30 1.7E-34 239.0 24.6 266 89-366 22-315 (316)
62 2oz4_A Intercellular adhesion 100.0 4.9E-30 1.7E-34 232.7 23.6 247 88-364 3-264 (265)
63 2wng_A Tyrosine-protein phosph 100.0 2.3E-30 7.9E-35 242.4 20.0 263 91-360 3-316 (327)
64 1qgc_4 Protein (immunoglobulin 100.0 1.3E-30 4.4E-35 254.4 18.7 314 40-361 4-436 (438)
65 1qz1_A Neural cell adhesion mo 100.0 5.2E-28 1.8E-32 222.5 27.5 240 181-470 3-262 (291)
66 1zvo_C Myeloma immunoglobulin 100.0 7.1E-28 2.4E-32 238.9 30.1 313 97-456 6-447 (512)
67 2wim_A N-CAM 2, NCAM2, neural 100.0 2.5E-28 8.4E-33 224.6 21.8 240 180-470 4-256 (291)
68 1igt_B IGG2A intact antibody - 100.0 1.4E-28 4.9E-33 240.3 19.8 307 42-353 5-434 (444)
69 2y25_A Myomesin; structural pr 100.0 8.1E-29 2.8E-33 230.7 12.8 250 179-470 6-287 (317)
70 4dep_C Interleukin-1 receptor 100.0 5.7E-28 2E-32 228.3 18.1 227 185-455 11-273 (349)
71 2nzi_A Titin; IG-domain, FNIII 100.0 1.2E-26 4E-31 214.9 25.9 250 89-356 2-282 (305)
72 3o4o_C Interleukin-1 receptor 100.0 6.2E-28 2.1E-32 227.1 16.7 233 179-454 17-272 (339)
73 3ejj_X Macrophage colony-stimu 100.0 2.9E-27 1E-31 217.2 20.4 231 188-470 11-253 (289)
74 1iga_A IGA1; immunoglobulin; N 100.0 4.5E-26 1.5E-30 224.4 29.6 245 104-354 139-444 (475)
75 3oq3_B IFN-alpha/beta binding 100.0 2.1E-27 7.1E-32 222.5 18.7 232 190-470 38-301 (329)
76 2y23_A Myomesin; structural pr 100.0 2.7E-27 9.3E-32 219.9 19.4 249 190-470 10-284 (312)
77 3u83_A Poliovirus receptor-rel 100.0 8.6E-27 3E-31 218.5 22.9 243 180-470 13-292 (331)
78 1ry7_B FGFR-3, fibroblast grow 100.0 2.1E-28 7.2E-33 229.8 11.2 237 188-470 15-299 (334)
79 4fqp_A Poliovirus receptor; im 100.0 1.2E-26 3.9E-31 215.9 22.6 234 188-470 7-276 (313)
80 2o26_X MAST/stem cell growth f 100.0 1.4E-26 4.7E-31 212.8 22.6 232 179-470 11-260 (290)
81 1hzh_H IGG, immunoglobulin hea 99.9 2E-27 6.9E-32 233.0 16.9 258 92-354 133-444 (457)
82 1igy_B IGG1 intact antibody MA 99.9 2.1E-28 7E-33 238.4 8.5 307 42-353 4-424 (434)
83 2wqr_A IG epsilon chain C regi 99.9 5.9E-28 2E-32 225.6 10.9 260 89-353 5-309 (323)
84 1itb_B Type 1 interleukin-1 re 99.9 1.1E-27 3.8E-32 222.9 12.8 224 189-456 13-253 (315)
85 3rjd_A High affinity immunoglo 99.9 8.8E-26 3E-30 204.1 23.6 223 181-470 2-231 (262)
86 2wng_A Tyrosine-protein phosph 99.9 1.7E-26 5.8E-31 216.1 18.4 222 186-456 8-266 (327)
87 1za6_B IGG heavy chain; immuno 99.9 2.2E-26 7.4E-31 216.9 16.9 255 97-355 6-332 (344)
88 2jll_A NCAM2, neural cell adhe 99.9 3.5E-25 1.2E-29 212.3 25.3 264 91-364 1-288 (389)
89 4fom_A Poliovirus receptor-rel 99.9 6.7E-26 2.3E-30 210.2 19.5 234 190-470 8-272 (308)
90 3vh8_G Killer cell immunoglobu 99.9 1.8E-25 6.2E-30 208.1 21.6 243 173-470 17-282 (316)
91 4dkd_C Macrophage colony-stimu 99.9 2.2E-25 7.4E-30 205.0 16.6 238 179-470 3-253 (292)
92 2oz4_A Intercellular adhesion 99.9 4.4E-25 1.5E-29 200.0 17.0 198 192-451 14-224 (265)
93 1zvo_C Myeloma immunoglobulin 99.9 6.9E-23 2.4E-27 203.1 33.9 253 105-364 149-505 (512)
94 2nzi_A Titin; IG-domain, FNIII 99.9 1.2E-23 4.1E-28 194.6 23.5 186 179-366 3-199 (305)
95 2jll_A NCAM2, neural cell adhe 99.9 1.2E-22 4.1E-27 194.6 30.0 176 189-366 8-196 (389)
96 2a38_A Titin; Z1Z2, structural 99.9 1.6E-23 5.4E-28 180.2 20.6 181 180-363 5-194 (194)
97 2j8h_A Titin, connectin; cardi 99.9 1.6E-23 5.4E-28 180.7 20.6 184 179-364 3-197 (197)
98 2va4_A NCAM2, N-CAM 2, neural 99.9 1.1E-23 3.9E-28 180.7 19.1 181 180-363 2-192 (192)
99 2a38_A Titin; Z1Z2, structural 99.9 9.8E-24 3.3E-28 181.5 18.4 178 89-270 3-193 (194)
100 3mjg_X Beta-type platelet-deri 99.9 1.1E-23 3.7E-28 193.4 18.8 221 190-470 9-250 (289)
101 3lcy_A Titin; A-BAND, IG tande 99.9 2.7E-23 9.1E-28 179.1 20.0 185 179-365 6-197 (197)
102 3rbs_A Myomesin-1; immunoglobu 99.9 1.4E-23 4.8E-28 182.1 18.2 170 190-363 11-206 (207)
103 1za6_B IGG heavy chain; immuno 99.9 1E-23 3.5E-28 198.6 17.6 240 189-457 8-289 (344)
104 2iep_A Muscle-specific kinase 99.9 1.1E-23 3.6E-28 180.9 16.3 183 180-366 7-192 (192)
105 2wv3_A Neuroplastin; igcam, me 99.9 9.4E-23 3.2E-27 174.8 22.0 176 180-363 3-189 (190)
106 2v5t_A NCAM2, N-CAM 2, neural 99.9 4.3E-23 1.5E-27 176.6 19.2 173 189-363 10-187 (189)
107 2yd1_A Tyrosine-protein phosph 99.9 7.8E-23 2.7E-27 178.6 21.1 184 179-366 5-202 (212)
108 2v5t_A NCAM2, N-CAM 2, neural 99.9 2E-23 6.7E-28 178.7 16.9 178 91-271 2-187 (189)
109 4fa8_A Secreted protein BARF1; 99.9 3.1E-23 1.1E-27 178.9 16.1 165 191-356 3-194 (203)
110 2yd1_A Tyrosine-protein phosph 99.9 1.8E-22 6.3E-27 176.2 20.8 182 89-274 4-202 (212)
111 2c5d_C AXL oncogene, tyrosine- 99.9 1.6E-22 5.3E-27 174.2 19.7 176 180-362 2-191 (195)
112 2wqr_A IG epsilon chain C regi 99.9 4.1E-24 1.4E-28 199.5 10.3 217 197-456 25-265 (323)
113 2yd6_A PTPRD protein; hydrolas 99.9 2.5E-22 8.7E-27 175.3 20.6 185 179-366 5-206 (212)
114 2j8h_A Titin, connectin; cardi 99.9 1.2E-22 4.1E-27 175.1 18.4 178 89-271 2-196 (197)
115 3grw_A Fibroblast growth facto 99.9 2E-22 6.7E-27 179.7 20.3 178 189-367 23-221 (241)
116 2v44_A NCAM2, neural cell adhe 99.9 3.1E-22 1E-26 171.4 20.5 171 189-362 10-185 (189)
117 2iep_A Muscle-specific kinase 99.9 2.7E-23 9.4E-28 178.3 13.9 180 89-274 5-192 (192)
118 1rhf_A Tyrosine-protein kinase 99.9 1.8E-22 6E-27 171.7 18.5 166 189-363 10-182 (182)
119 3lcy_A Titin; A-BAND, IG tande 99.9 7.6E-23 2.6E-27 176.2 16.2 180 88-272 4-196 (197)
120 1mq8_A ICAM-1, intercellular a 99.9 2.5E-23 8.7E-28 188.1 13.6 263 93-366 1-284 (291)
121 2r15_A Myomesin-1; sarcomeric 99.9 3.1E-22 1.1E-26 174.6 19.9 172 194-365 15-211 (212)
122 1vca_A VCAM-D1,2, human vascul 99.9 1.8E-22 6.3E-27 174.5 18.0 179 185-366 5-199 (202)
123 2yd6_A PTPRD protein; hydrolas 99.9 4.1E-22 1.4E-26 174.0 19.3 183 89-275 4-207 (212)
124 3s97_C Contactin-1; carbonic a 99.9 3.1E-22 1.1E-26 173.0 18.0 177 183-363 10-200 (201)
125 2wv3_A Neuroplastin; igcam, me 99.9 1.3E-21 4.5E-26 167.6 21.6 173 91-271 3-189 (190)
126 3ojm_B Fibroblast growth facto 99.9 2.7E-22 9.3E-27 177.4 17.6 177 189-366 27-223 (231)
127 2x1w_L Vascular endothelial gr 99.9 3.1E-22 1.1E-26 174.9 17.7 179 97-276 13-211 (213)
128 3bp6_B Programmed cell death 1 99.9 8.6E-22 3E-26 170.5 19.9 176 187-365 8-194 (202)
129 1epf_A NCAM, protein (neural c 99.9 6.8E-22 2.3E-26 169.5 19.1 172 189-362 10-189 (191)
130 3sgj_C Human FCG3A receptor; r 99.9 2.5E-22 8.4E-27 174.0 16.4 169 89-274 5-176 (204)
131 2v44_A NCAM2, neural cell adhe 99.9 1.5E-21 5.1E-26 167.1 20.7 173 92-270 3-185 (189)
132 2c5d_C AXL oncogene, tyrosine- 99.9 1.2E-21 4.1E-26 168.5 19.9 171 90-270 1-191 (195)
133 3jz7_A MCAR, CAR, coxsackievir 99.9 2.7E-22 9.1E-27 175.2 15.8 174 190-365 9-213 (214)
134 1f97_A Junction adhesion molec 99.9 4.8E-22 1.6E-26 173.4 17.2 174 188-365 8-208 (212)
135 2v9r_A Roundabout homolog 1; p 99.9 3.2E-22 1.1E-26 174.5 15.4 189 88-280 6-210 (212)
136 1epf_A NCAM, protein (neural c 99.9 1.2E-21 4.2E-26 167.9 18.4 175 91-270 2-189 (191)
137 2x1w_L Vascular endothelial gr 99.9 4.7E-22 1.6E-26 173.7 15.9 175 189-366 15-209 (213)
138 2ifg_A High affinity nerve gro 99.9 1.2E-23 4.3E-28 198.1 6.1 202 151-366 136-347 (347)
139 3rbs_A Myomesin-1; immunoglobu 99.9 4.7E-22 1.6E-26 172.4 14.8 165 99-270 10-205 (207)
140 1f97_A Junction adhesion molec 99.9 1.3E-21 4.4E-26 170.6 17.7 179 91-271 1-206 (212)
141 2v9r_A Roundabout homolog 1; p 99.9 2.6E-22 9E-27 175.1 13.0 184 180-366 9-204 (212)
142 1f2q_A High affinity immunoglo 99.9 6.6E-22 2.3E-26 167.2 15.0 170 89-275 2-174 (176)
143 3sgj_C Human FCG3A receptor; r 99.9 4.8E-22 1.6E-26 172.1 14.2 168 179-366 6-176 (204)
144 2va4_A NCAM2, N-CAM 2, neural 99.9 2.1E-21 7.3E-26 166.4 17.9 173 91-270 2-191 (192)
145 3grw_A Fibroblast growth facto 99.9 4.6E-21 1.6E-25 170.8 20.3 178 98-278 22-224 (241)
146 1vca_A VCAM-D1,2, human vascul 99.9 1.3E-21 4.3E-26 169.2 16.1 178 93-275 2-200 (202)
147 3k0w_A Mucosa-associated lymph 99.9 2.8E-21 9.6E-26 169.4 18.2 170 180-366 18-204 (218)
148 3r4d_A CEA-related cell adhesi 99.9 2.8E-21 9.6E-26 168.0 18.1 177 94-275 2-203 (208)
149 2gi7_A GPVI protein; IG-like d 99.9 2.5E-21 8.4E-26 164.9 17.2 160 89-260 6-168 (184)
150 3ojm_B Fibroblast growth facto 99.9 3.1E-21 1.1E-25 170.6 18.2 184 90-276 14-225 (231)
151 1fnl_A Low affinity immunoglob 99.9 1.7E-21 6E-26 164.4 15.9 167 89-272 5-174 (175)
152 2vr9_A Roundabout 1, ROBO; imm 99.9 5.5E-22 1.9E-26 173.8 13.2 184 179-365 8-207 (217)
153 3k0w_A Mucosa-associated lymph 99.9 3.5E-21 1.2E-25 168.8 18.3 173 88-272 15-202 (218)
154 2c1o_A IGK-C protein; FAB frag 99.9 6.2E-22 2.1E-26 178.0 13.7 201 147-356 11-247 (254)
155 1rhf_A Tyrosine-protein kinase 99.9 2.8E-21 9.7E-26 164.2 16.6 168 91-270 2-181 (182)
156 2vr9_A Roundabout 1, ROBO; imm 99.9 1.7E-21 5.9E-26 170.6 15.6 180 88-271 6-205 (217)
157 1ugn_A LIR1, leukocyte immunog 99.9 3.4E-21 1.2E-25 166.2 16.6 165 89-260 3-181 (198)
158 1nbq_A JAM, junctional adhesio 99.9 1E-21 3.4E-26 170.9 13.3 179 90-270 3-207 (209)
159 3p2t_A Leukocyte immunoglobuli 99.9 4E-21 1.4E-25 165.5 16.6 178 179-363 4-195 (196)
160 2d3v_A Leukocyte immunoglobuli 99.9 1.6E-21 5.5E-26 167.9 14.1 164 90-260 4-180 (196)
161 1nbq_A JAM, junctional adhesio 99.9 7E-22 2.4E-26 171.9 11.9 173 187-363 10-208 (209)
162 1oll_A NK receptor; immune sys 99.9 4.6E-21 1.6E-25 163.8 16.4 173 90-270 3-186 (188)
163 1uct_A Immunoglobulin alpha FC 99.9 7.7E-21 2.6E-25 166.2 18.1 177 89-272 7-198 (218)
164 3jz7_A MCAR, CAR, coxsackievir 99.9 2.4E-21 8.1E-26 169.1 14.8 176 94-273 3-213 (214)
165 3p2t_A Leukocyte immunoglobuli 99.9 6.6E-21 2.3E-25 164.1 17.2 165 90-260 4-179 (196)
166 2d3v_A Leukocyte immunoglobuli 99.9 2.3E-21 8E-26 166.9 14.0 167 179-352 4-180 (196)
167 3r4d_A CEA-related cell adhesi 99.9 1.1E-20 3.7E-25 164.3 18.4 170 191-366 9-202 (208)
168 2r15_A Myomesin-1; sarcomeric 99.9 6.8E-21 2.3E-25 166.1 17.0 166 104-272 15-210 (212)
169 3b5h_A Cervical EMMPRIN, HAB18 99.9 1.1E-20 3.8E-25 160.8 17.8 163 192-364 9-183 (184)
170 4fa8_A Secreted protein BARF1; 99.9 1.3E-21 4.6E-26 168.6 12.1 158 100-264 2-194 (203)
171 3s97_C Contactin-1; carbonic a 99.9 7E-21 2.4E-25 164.4 16.5 170 97-271 14-200 (201)
172 1ugn_A LIR1, leukocyte immunog 99.9 4.3E-21 1.5E-25 165.6 15.0 178 179-363 4-197 (198)
173 1uct_A Immunoglobulin alpha FC 99.9 9.7E-21 3.3E-25 165.6 16.7 180 179-366 8-200 (218)
174 1fnl_A Low affinity immunoglob 99.9 5.5E-21 1.9E-25 161.4 14.6 166 179-364 6-174 (175)
175 2fbo_J V1V2;, variable region- 99.9 3.8E-21 1.3E-25 172.3 13.9 174 188-362 9-250 (250)
176 2gi7_A GPVI protein; IG-like d 99.9 7.9E-21 2.7E-25 161.8 15.2 158 178-352 6-168 (184)
177 1f2q_A High affinity immunoglo 99.9 5.5E-21 1.9E-25 161.5 13.9 168 179-366 3-173 (176)
178 1b6u_A KIR2DL3, P58 killer cel 99.9 1.4E-20 4.9E-25 168.3 17.3 215 89-312 5-240 (257)
179 3ry4_A Low affinity immunoglob 99.9 9.6E-21 3.3E-25 159.0 14.8 165 89-270 2-169 (170)
180 4frw_A Poliovirus receptor-rel 99.8 3.7E-20 1.3E-24 161.8 17.4 175 188-363 6-210 (218)
181 1oll_A NK receptor; immune sys 99.8 1.9E-20 6.6E-25 159.9 15.0 176 179-363 3-187 (188)
182 3bp6_B Programmed cell death 1 99.8 2.2E-20 7.7E-25 161.6 15.2 172 93-273 4-194 (202)
183 3ry4_A Low affinity immunoglob 99.8 3.3E-20 1.1E-24 155.7 15.8 163 180-362 4-169 (170)
184 2ny1_B T-cell surface glycopro 99.8 2.8E-20 9.7E-25 158.4 15.4 159 190-366 4-181 (184)
185 2fbo_J V1V2;, variable region- 99.8 1.9E-20 6.5E-25 167.7 15.0 175 94-269 5-249 (250)
186 1p6f_A NKP46, natural cytotoxi 99.8 4.9E-20 1.7E-24 163.6 17.2 176 89-272 5-191 (242)
187 4f80_A Butyrophilin subfamily 99.8 9.9E-20 3.4E-24 160.5 19.2 175 187-365 10-214 (226)
188 3mj6_A Junctional adhesion mol 99.8 6.5E-20 2.2E-24 166.1 18.4 193 91-291 5-256 (268)
189 3mj6_A Junctional adhesion mol 99.8 2.9E-20 9.8E-25 168.5 16.0 170 190-365 14-238 (268)
190 1b6u_A KIR2DL3, P58 killer cel 99.8 5.7E-20 2E-24 164.4 17.3 216 179-451 6-241 (257)
191 2ny1_B T-cell surface glycopro 99.8 1.4E-19 4.7E-24 154.1 18.2 155 100-275 4-182 (184)
192 3sbw_C Programmed cell death 1 99.8 3.6E-19 1.2E-23 156.4 20.6 177 187-366 7-213 (222)
193 1hng_A CD2; T lymphocyte adhes 99.8 2.1E-20 7E-25 157.8 11.9 156 191-362 6-174 (176)
194 2c1o_A IGK-C protein; FAB frag 99.8 5.5E-20 1.9E-24 165.2 15.5 201 46-262 8-245 (254)
195 2ifg_A High affinity nerve gro 99.8 8.3E-21 2.9E-25 178.8 10.4 177 89-274 156-347 (347)
196 1nkr_A P58-CL42 KIR; inhibitor 99.8 3E-19 1E-23 154.3 18.7 162 89-258 6-183 (201)
197 3d9a_L Light chain of hyhel10 99.8 8.3E-20 2.8E-24 159.4 15.2 169 93-262 3-203 (213)
198 1p6f_A NKP46, natural cytotoxi 99.8 1E-19 3.4E-24 161.5 15.6 179 179-366 6-193 (242)
199 3mj8_L Stimulatory hamster ant 99.8 9.2E-20 3.1E-24 159.1 14.2 168 190-359 9-208 (213)
200 2pet_A Lutheran blood group gl 99.8 7.3E-20 2.5E-24 161.8 13.2 174 187-363 6-230 (231)
201 1jbj_A CD3 epsilon and gamma e 99.8 2.4E-20 8.2E-25 159.0 9.4 145 192-354 10-179 (186)
202 1mq8_A ICAM-1, intercellular a 99.8 1.4E-19 4.7E-24 163.7 14.8 222 190-465 8-244 (291)
203 3eow_R Poliovirus receptor; im 99.8 5.9E-20 2E-24 161.3 11.6 173 190-364 8-212 (221)
204 3d9a_L Light chain of hyhel10 99.8 1.4E-19 4.7E-24 158.0 13.8 170 189-360 9-209 (213)
205 1lk3_L 9D7 light chain; antige 99.8 2.4E-19 8.3E-24 156.0 15.2 167 94-262 4-202 (210)
206 3mj8_L Stimulatory hamster ant 99.8 6.3E-20 2.1E-24 160.1 11.5 173 92-266 2-207 (213)
207 4f80_A Butyrophilin subfamily 99.8 7.7E-19 2.6E-23 154.7 18.5 168 99-272 12-213 (226)
208 1jbj_A CD3 epsilon and gamma e 99.8 7.7E-20 2.6E-24 155.8 11.3 147 101-262 9-179 (186)
209 3pv7_A B7-H6, IG-like domain-c 99.8 4.2E-19 1.4E-23 158.8 16.6 178 183-363 5-225 (248)
210 1nkr_A P58-CL42 KIR; inhibitor 99.8 7.6E-19 2.6E-23 151.7 17.4 164 179-351 7-184 (201)
211 3b5h_A Cervical EMMPRIN, HAB18 99.8 1.2E-18 4.2E-23 148.1 18.4 160 101-271 8-182 (184)
212 4i0k_A CD276 antigen; immunogl 99.8 2E-19 6.8E-24 158.0 13.7 172 191-366 5-208 (222)
213 2if7_A SLAM family member 6; N 99.8 3.2E-19 1.1E-23 153.0 14.5 157 190-359 7-187 (193)
214 3nl4_L Antigen binding fragmen 99.8 4.2E-19 1.4E-23 154.8 15.5 164 92-256 2-198 (213)
215 1lk3_L 9D7 light chain; antige 99.8 4.7E-19 1.6E-23 154.2 15.5 167 188-356 7-204 (210)
216 4frw_A Poliovirus receptor-rel 99.8 8.2E-19 2.8E-23 153.2 16.4 170 98-271 6-210 (218)
217 3sob_L Antibody light chain; b 99.8 6.8E-19 2.3E-23 156.2 14.6 173 90-263 23-227 (237)
218 2pet_A Lutheran blood group gl 99.8 2.9E-19 9.9E-24 157.9 11.8 160 97-258 6-211 (231)
219 2ghw_B Anti-SARS SCFV antibody 99.8 1.8E-18 6.2E-23 154.6 17.1 172 190-363 11-241 (247)
220 3esu_F Antibody 14B7* light ch 99.8 4.7E-18 1.6E-22 152.1 18.9 166 91-257 4-231 (250)
221 1hng_A CD2; T lymphocyte adhes 99.8 1.2E-18 4.1E-23 146.9 13.8 152 100-270 5-174 (176)
222 3nl4_L Antigen binding fragmen 99.8 2.8E-18 9.7E-23 149.6 16.3 158 189-348 9-198 (213)
223 3auv_A SC-DSFV derived from th 99.8 4E-18 1.4E-22 155.0 17.9 168 90-258 11-235 (276)
224 2zg1_A Sialic acid-binding IG- 99.8 4.4E-18 1.5E-22 148.5 17.4 167 188-362 7-213 (214)
225 1nqb_A Single-chain antibody f 99.8 2.9E-18 9.9E-23 154.0 16.6 175 189-365 8-234 (256)
226 4i0k_A CD276 antigen; immunogl 99.8 1.6E-18 5.4E-23 152.2 14.4 176 99-278 3-212 (222)
227 1c1e_H Catalytic antibody 1E9 99.8 2.2E-18 7.6E-23 151.0 15.1 170 189-361 8-217 (219)
228 1f3r_B FV antibody fragment; I 99.8 1.1E-18 3.7E-23 157.0 13.1 174 191-365 10-246 (257)
229 1sy6_A T-cell surface glycopro 99.8 2.1E-19 7.2E-24 155.4 8.1 155 193-363 15-203 (204)
230 3r06_A Anti-mouse CD3epsilon a 99.8 1E-18 3.5E-23 152.4 12.4 170 92-262 2-203 (213)
231 1dr9_A B7-1 (CD80), T lymphocy 99.8 9.2E-19 3.2E-23 151.2 12.1 165 191-360 4-197 (201)
232 2xzc_L FAB A.17 light chain; i 99.8 3.4E-18 1.2E-22 149.4 15.8 171 189-360 8-211 (216)
233 2p1y_A Bispecific alpha/beta T 99.8 7.6E-18 2.6E-22 149.6 18.1 165 93-259 2-222 (238)
234 3bkj_L WO2 IGG2A FAB fragment 99.8 1.7E-18 5.7E-23 155.3 13.9 172 90-262 33-241 (252)
235 3tv3_L PGT128 light chain, IG 99.8 1.2E-18 4.1E-23 151.7 12.6 166 190-359 9-206 (211)
236 2zg1_A Sialic acid-binding IG- 99.8 1.4E-17 4.7E-22 145.3 19.1 165 97-269 6-212 (214)
237 2xzc_L FAB A.17 light chain; i 99.8 3.9E-18 1.3E-22 149.1 15.5 165 98-263 7-206 (216)
238 3pv7_A B7-H6, IG-like domain-c 99.8 3.8E-18 1.3E-22 152.5 15.8 174 92-270 3-224 (248)
239 1moe_A Anti-CEA MAB T84.66; an 99.8 7.2E-18 2.4E-22 150.0 17.3 165 92-257 2-219 (240)
240 3shs_A HOC head outer capsid p 99.8 9E-17 3.1E-21 137.8 23.0 243 92-349 3-279 (304)
241 1q0x_L FAB 9B1, light chain; a 99.8 3.4E-18 1.2E-22 149.0 14.8 169 93-263 3-206 (212)
242 4fmk_A Poliovirus receptor-rel 99.8 6.5E-18 2.2E-22 148.2 16.5 173 190-364 10-219 (225)
243 3s96_B 3B5H10 FAB light chain; 99.8 1.3E-18 4.4E-23 152.3 11.9 172 92-265 2-213 (218)
244 1sy6_A T-cell surface glycopro 99.8 4.6E-19 1.6E-23 153.2 8.8 156 103-270 15-202 (204)
245 1svz_A Immunoglobulin;, single 99.8 1.5E-17 5.1E-22 148.6 18.6 166 92-258 2-228 (247)
246 1gsm_A Madcam-1, mucosal addre 99.8 5.5E-17 1.9E-21 138.5 21.1 158 191-356 17-197 (210)
247 3sbw_C Programmed cell death 1 99.8 8.1E-18 2.8E-22 147.6 16.4 173 97-275 7-214 (222)
248 1q0x_L FAB 9B1, light chain; a 99.8 4.4E-18 1.5E-22 148.3 14.2 168 189-358 8-209 (212)
249 2znx_A SCFV; fluorotryptohpan, 99.8 8.7E-18 3E-22 149.6 16.4 165 92-258 2-222 (242)
250 1hnf_A CD2; T lymphocyte adhes 99.8 6.3E-18 2.1E-22 142.7 14.3 156 191-362 9-179 (182)
251 3s96_B 3B5H10 FAB light chain; 99.8 2.1E-18 7.2E-23 151.0 11.8 167 190-358 9-214 (218)
252 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 4.6E-18 1.6E-22 149.3 13.7 169 190-361 9-220 (222)
253 3uzq_A Anti-dengue MAB 4E11; d 99.8 1E-17 3.4E-22 150.3 15.9 179 94-274 4-246 (253)
254 2p1y_A Bispecific alpha/beta T 99.8 2.4E-17 8.2E-22 146.3 18.0 160 189-351 8-222 (238)
255 2ghw_B Anti-SARS SCFV antibody 99.8 1E-17 3.5E-22 149.6 15.7 172 98-271 9-241 (247)
256 2if7_A SLAM family member 6; N 99.8 1.3E-17 4.5E-22 142.8 15.7 155 97-265 4-185 (193)
257 1dr9_A B7-1 (CD80), T lymphocy 99.8 5.4E-18 1.9E-22 146.3 13.3 163 100-268 3-197 (201)
258 3tv3_L PGT128 light chain, IG 99.8 3.1E-18 1.1E-22 149.1 11.7 170 94-266 4-205 (211)
259 1f3r_B FV antibody fragment; I 99.8 6E-18 2.1E-22 152.1 13.8 162 97-259 6-232 (257)
260 3gkz_A Anti-methamphetamine si 99.8 2.3E-17 8E-22 148.3 17.7 178 188-366 15-251 (257)
261 3qib_D 2B4 beta chain; IG doma 99.8 2.4E-18 8E-23 156.0 11.2 197 147-355 3-246 (270)
262 3umt_A SCFV heavy chain and li 99.8 1.1E-17 3.9E-22 150.2 15.5 175 190-366 11-247 (256)
263 3r06_A Anti-mouse CD3epsilon a 99.8 1.1E-17 3.7E-22 145.9 14.8 168 189-358 9-207 (213)
264 4fmk_A Poliovirus receptor-rel 99.8 1.5E-17 5.1E-22 145.9 15.4 172 98-272 8-219 (225)
265 1nfd_E H57 FAB; complex (immun 99.8 5.1E-19 1.7E-23 154.2 5.8 167 188-356 6-204 (212)
266 2dru_A Chimera of CD48 antigen 99.8 1.2E-17 4.1E-22 141.1 14.0 155 189-360 7-177 (180)
267 3d9a_H Heavy chain of hyhel10 99.8 7.5E-18 2.6E-22 146.6 12.8 165 190-358 9-208 (210)
268 3uzq_A Anti-dengue MAB 4E11; d 99.8 9.6E-18 3.3E-22 150.4 13.9 176 189-366 9-246 (253)
269 1qok_A MFE-23 recombinant anti 99.7 2.5E-17 8.4E-22 150.2 16.8 174 189-365 34-269 (282)
270 2gjj_A A21 single-chain antibo 99.7 4.9E-17 1.7E-21 146.6 18.6 168 90-258 4-239 (264)
271 1nfd_E H57 FAB; complex (immun 99.7 6.4E-19 2.2E-23 153.6 5.9 163 98-261 6-201 (212)
272 3auv_A SC-DSFV derived from th 99.7 2.7E-17 9.3E-22 149.5 16.6 177 189-366 20-256 (276)
273 1mju_H Immunoglobulin MS6-12; 99.7 1.5E-17 5.2E-22 146.4 14.5 175 189-366 8-219 (227)
274 3gkz_A Anti-methamphetamine si 99.7 2.9E-17 1E-21 147.6 16.5 163 95-259 12-235 (257)
275 3umt_A SCFV heavy chain and li 99.7 2.6E-17 8.9E-22 147.9 16.1 175 97-273 8-246 (256)
276 3bqu_C 3H6 FAB light chain; be 99.7 1.8E-18 6.1E-23 153.1 8.3 170 90-260 22-223 (233)
277 1pz5_B Heavy chain of FAB (SYA 99.7 1.7E-17 6E-22 145.4 14.5 167 190-359 9-216 (220)
278 1nqb_A Single-chain antibody f 99.7 2.7E-17 9.3E-22 147.6 15.9 171 97-271 6-232 (256)
279 3juy_B 3B3 single chain varian 99.7 5.1E-17 1.7E-21 145.9 17.6 168 90-259 5-243 (256)
280 1mju_H Immunoglobulin MS6-12; 99.7 1.9E-17 6.6E-22 145.8 14.3 176 97-274 6-219 (227)
281 2j6e_L IGM, FAB light chain; a 99.7 4.6E-18 1.6E-22 150.6 10.3 170 189-359 27-230 (234)
282 3ux9_B SCFV antibody; five hel 99.7 5.9E-17 2E-21 145.5 17.6 161 190-351 11-236 (256)
283 3sob_L Antibody light chain; b 99.7 1.8E-17 6.1E-22 147.0 14.1 170 189-360 32-232 (237)
284 3eow_R Poliovirus receptor; im 99.7 7.3E-18 2.5E-22 147.9 11.3 166 98-268 6-208 (221)
285 1moe_A Anti-CEA MAB T84.66; an 99.7 4.4E-17 1.5E-21 144.8 16.5 160 189-349 9-219 (240)
286 3juy_B 3B3 single chain varian 99.7 2E-17 6.7E-22 148.6 14.2 169 183-352 8-244 (256)
287 1c1e_H Catalytic antibody 1E9 99.7 2.2E-17 7.6E-22 144.6 14.0 169 97-267 6-215 (219)
288 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 3.1E-17 1.1E-21 147.3 15.2 167 92-261 4-235 (256)
289 1ccz_A Protein (CD58); LFA-3, 99.7 7.9E-18 2.7E-22 141.0 10.5 152 191-361 5-168 (171)
290 2znx_A SCFV; fluorotryptohpan, 99.7 4.5E-17 1.5E-21 145.0 15.9 161 189-350 9-222 (242)
291 3omz_A Human vdelta1 gamma del 99.7 3.1E-17 1.1E-21 147.6 15.1 167 91-258 2-231 (259)
292 1qok_A MFE-23 recombinant anti 99.7 4.7E-17 1.6E-21 148.3 16.3 175 94-271 29-267 (282)
293 3bkj_L WO2 IGG2A FAB fragment 99.7 1.8E-17 6.1E-22 148.6 13.0 165 189-355 42-242 (252)
294 1hnf_A CD2; T lymphocyte adhes 99.7 1.2E-16 4.2E-21 134.8 17.3 149 99-268 7-177 (182)
295 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 3.4E-17 1.1E-21 143.7 14.4 168 98-267 7-218 (222)
296 4dzb_B Vbeta2 (MAIT T cell rec 99.7 1.9E-17 6.5E-22 147.8 12.6 166 189-355 9-222 (246)
297 2vol_A Murine IGG FC; FC, zinc 99.7 5.5E-18 1.9E-22 147.0 8.8 171 181-353 2-197 (207)
298 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 6.8E-17 2.3E-21 145.1 16.2 175 188-365 10-249 (256)
299 1dee_B IGM RF 2A2; FAB-IBP com 99.7 1.6E-16 5.3E-21 139.5 18.2 167 190-358 9-221 (223)
300 3esu_F Antibody 14B7* light ch 99.7 6E-17 2.1E-21 144.9 15.8 161 188-349 11-231 (250)
301 2j6e_L IGM, FAB light chain; a 99.7 9.5E-18 3.2E-22 148.5 10.4 173 91-265 20-228 (234)
302 3ux9_B SCFV antibody; five hel 99.7 7.9E-17 2.7E-21 144.7 16.5 162 97-259 8-236 (256)
303 1op3_H FAB 2G12, heavy chain; 99.7 5.1E-17 1.8E-21 142.9 14.8 164 190-356 9-217 (225)
304 1gsm_A Madcam-1, mucosal addre 99.7 1.6E-16 5.6E-21 135.5 17.3 164 93-263 7-196 (210)
305 4dzb_B Vbeta2 (MAIT T cell rec 99.7 3.1E-17 1.1E-21 146.4 13.1 170 92-261 2-220 (246)
306 2fbj_H IGA-kappa J539 FAB (hea 99.7 7.5E-17 2.6E-21 141.2 15.2 163 190-355 9-212 (220)
307 1svz_A Immunoglobulin;, single 99.7 1.1E-16 3.9E-21 142.8 16.7 161 189-350 9-228 (247)
308 2rgs_A I, IG gamma-2B heavy ch 99.7 3.1E-18 1.1E-22 149.8 6.1 174 179-354 8-206 (218)
309 2fbj_H IGA-kappa J539 FAB (hea 99.7 1.2E-16 4.2E-21 139.9 15.7 164 98-263 7-212 (220)
310 3bae_H WO2 IGG2A FAB fragment 99.7 4.4E-17 1.5E-21 143.6 12.7 168 190-360 9-222 (228)
311 3q5y_A TCR N15 beta; IG, T cel 99.7 3.7E-17 1.3E-21 145.4 12.1 169 92-260 3-212 (240)
312 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 1.8E-16 6E-21 143.4 16.7 168 90-258 14-254 (268)
313 3nfj_J T cell receptor beta ch 99.7 3.1E-17 1.1E-21 146.3 11.4 169 93-261 3-219 (245)
314 3bqu_C 3H6 FAB light chain; be 99.7 5.2E-18 1.8E-22 150.1 6.2 163 189-353 31-224 (233)
315 3d9a_H Heavy chain of hyhel10 99.7 5.8E-17 2E-21 140.9 12.6 164 97-264 6-206 (210)
316 3pl6_D MBP peptide / T-cell re 99.7 4.7E-17 1.6E-21 147.3 12.4 171 90-260 25-240 (268)
317 2dru_A Chimera of CD48 antigen 99.7 2.2E-16 7.7E-21 133.3 15.7 148 99-267 7-176 (180)
318 4ei6_B Vbeta16 XV19 type II na 99.7 4.9E-17 1.7E-21 145.0 12.1 169 92-260 3-218 (245)
319 2rgs_A I, IG gamma-2B heavy ch 99.7 4.1E-18 1.4E-22 149.1 4.8 171 88-261 6-205 (218)
320 3nfj_J T cell receptor beta ch 99.7 1.2E-16 4.1E-21 142.5 14.3 166 189-355 9-221 (245)
321 3nl4_H Antigen binding fragmen 99.7 1E-16 3.4E-21 140.0 13.3 171 190-362 8-212 (215)
322 1dee_B IGM RF 2A2; FAB-IBP com 99.7 5.5E-16 1.9E-20 136.0 17.9 168 98-266 7-221 (223)
323 1pz5_B Heavy chain of FAB (SYA 99.7 1.6E-16 5.6E-21 139.1 14.4 169 97-267 6-216 (220)
324 2w59_A IGY FCU3-4; immunoglobu 99.7 1.8E-17 6.3E-22 146.2 8.2 174 180-354 12-218 (231)
325 3pl6_D MBP peptide / T-cell re 99.7 1.1E-16 3.9E-21 144.7 13.6 165 188-354 33-242 (268)
326 2xqy_G A13-D6.3 monoclonal ant 99.7 2.1E-16 7.3E-21 141.9 15.0 168 190-360 15-221 (261)
327 2gki_A Nuclease; anti-DNA anti 99.7 6.8E-16 2.3E-20 141.3 18.3 163 96-259 27-258 (291)
328 1op3_H FAB 2G12, heavy chain; 99.7 1.3E-16 4.3E-21 140.3 12.9 164 98-263 7-216 (225)
329 2gjj_A A21 single-chain antibo 99.7 5.3E-16 1.8E-20 139.8 17.1 161 189-350 13-239 (264)
330 3m8o_H Immunoglobulin A1 heavy 99.7 6.3E-16 2.2E-20 135.5 16.9 162 190-355 9-214 (221)
331 3omz_A Human vdelta1 gamma del 99.7 2.7E-16 9.2E-21 141.5 14.7 175 189-365 10-251 (259)
332 1hxm_B Gamma-delta T-cell rece 99.7 2.4E-16 8.4E-21 140.1 14.2 176 93-270 3-227 (242)
333 2vol_A Murine IGG FC; FC, zinc 99.7 2.4E-17 8.3E-22 142.9 7.4 167 92-261 2-197 (207)
334 1dn0_B IGM-kappa cold agglutin 99.7 6E-16 2.1E-20 136.6 16.5 173 190-364 9-227 (232)
335 3fku_X Neutralizing antibody F 99.7 5E-16 1.7E-20 141.3 16.5 164 93-259 3-234 (280)
336 2gki_A Nuclease; anti-DNA anti 99.7 4.8E-16 1.6E-20 142.2 16.1 175 190-366 31-274 (291)
337 1hxm_B Gamma-delta T-cell rece 99.7 4E-16 1.4E-20 138.7 15.1 173 188-362 8-227 (242)
338 2wbj_D OB TCR; transmembrane, 99.7 2.8E-16 9.7E-21 142.9 14.1 172 90-261 23-245 (279)
339 3bae_H WO2 IGG2A FAB fragment 99.7 2.1E-16 7.2E-21 139.2 12.8 167 98-266 7-220 (228)
340 3m8o_H Immunoglobulin A1 heavy 99.7 1.5E-15 5.1E-20 133.0 18.2 162 97-261 6-212 (221)
341 3nl4_H Antigen binding fragmen 99.7 1.3E-16 4.5E-21 139.2 11.2 171 96-268 4-210 (215)
342 3mtr_A N-CAM-1, NCAM-1, neural 99.7 4.6E-16 1.6E-20 135.7 14.0 174 189-366 26-211 (215)
343 1dn0_B IGM-kappa cold agglutin 99.7 1.3E-15 4.4E-20 134.5 16.8 172 98-270 7-225 (232)
344 3qib_D 2B4 beta chain; IG doma 99.7 1.2E-16 4.1E-21 144.7 10.3 171 91-261 27-244 (270)
345 1ccz_A Protein (CD58); LFA-3, 99.7 3.9E-16 1.3E-20 130.6 12.3 147 100-268 4-167 (171)
346 4ei6_B Vbeta16 XV19 type II na 99.7 3.4E-16 1.2E-20 139.5 12.7 165 189-355 10-221 (245)
347 3q5y_A TCR N15 beta; IG, T cel 99.7 6.7E-16 2.3E-20 137.2 14.2 164 189-354 10-214 (240)
348 3liz_H 4C3 monoclonal antibody 99.7 2.5E-16 8.4E-21 141.1 11.3 172 98-271 7-219 (253)
349 3fku_X Neutralizing antibody F 99.7 8.2E-16 2.8E-20 139.8 14.9 175 189-366 8-252 (280)
350 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 9.4E-16 3.2E-20 138.6 15.0 161 189-350 23-254 (268)
351 2wbj_D OB TCR; transmembrane, 99.7 6.5E-16 2.2E-20 140.6 13.5 166 189-355 32-247 (279)
352 1i1c_A IGG2A, IG gamma-2A chai 99.7 7.3E-17 2.5E-21 142.9 7.0 173 181-354 16-212 (239)
353 4acp_A IG gamma-1 chain C regi 99.7 8.3E-17 2.8E-21 142.2 7.1 194 153-353 1-218 (240)
354 3o3u_N Maltose-binding peripla 99.7 1E-15 3.4E-20 154.5 15.8 163 190-354 375-567 (581)
355 2xqy_G A13-D6.3 monoclonal ant 99.7 2E-15 6.7E-20 135.6 15.9 164 96-261 11-214 (261)
356 1c5d_H Monoclonal antibody aga 99.7 1.6E-15 5.3E-20 132.3 14.8 167 190-359 9-211 (215)
357 1i1c_A IGG2A, IG gamma-2A chai 99.7 8.9E-17 3E-21 142.4 6.8 170 90-261 14-211 (239)
358 3liz_H 4C3 monoclonal antibody 99.7 8.1E-16 2.8E-20 137.7 13.0 172 190-363 9-219 (253)
359 3bn9_D E2 FAB heavy chain; ant 99.7 6E-16 2.1E-20 138.4 11.9 167 190-359 9-225 (257)
360 1l6x_A Immunoglobulin gamma-1 99.6 1.2E-16 4.2E-21 138.4 6.8 172 181-353 2-197 (207)
361 1bec_A 14.3.D T cell antigen r 99.6 9.3E-16 3.2E-20 136.0 12.5 167 94-260 2-211 (238)
362 1oga_E TRBC1, T-cell receptor 99.6 1.4E-15 4.9E-20 136.0 13.5 170 92-261 4-218 (252)
363 3mtr_A N-CAM-1, NCAM-1, neural 99.6 3.1E-15 1E-19 130.5 15.2 177 90-274 18-211 (215)
364 1bec_A 14.3.D T cell antigen r 99.6 2E-15 6.7E-20 133.9 13.7 164 189-354 7-213 (238)
365 2w59_A IGY FCU3-4; immunoglobu 99.6 3.1E-16 1.1E-20 138.3 8.0 167 90-261 11-217 (231)
366 3to4_D NKT vbeta2 (mouse varia 99.6 1.5E-15 5E-20 136.1 12.0 164 189-353 9-219 (253)
367 1c5d_H Monoclonal antibody aga 99.6 4.3E-15 1.5E-19 129.5 14.4 165 98-265 7-209 (215)
368 2v5y_A Receptor-type tyrosine- 99.6 4.2E-14 1.4E-18 146.5 24.3 248 104-363 89-353 (731)
369 3knb_B Obscurin-like protein 1 99.6 3E-15 1E-19 114.2 11.1 93 273-366 13-107 (107)
370 3bn9_D E2 FAB heavy chain; ant 99.6 1.2E-15 4.2E-20 136.4 10.3 163 98-262 7-220 (257)
371 3to4_D NKT vbeta2 (mouse varia 99.6 9.9E-16 3.4E-20 137.2 9.5 165 94-259 4-217 (253)
372 1ypz_F T-cell receptor gamma c 99.6 3.6E-15 1.2E-19 131.4 12.7 164 188-354 8-217 (230)
373 1oga_E TRBC1, T-cell receptor 99.6 6.9E-15 2.4E-19 131.6 14.3 166 188-355 10-220 (252)
374 1ypz_F T-cell receptor gamma c 99.6 3.4E-15 1.2E-19 131.6 11.8 166 94-261 4-216 (230)
375 1l6x_A Immunoglobulin gamma-1 99.6 6.8E-16 2.3E-20 133.7 6.6 167 92-261 2-197 (207)
376 3qhz_H Human monoclonal antibo 99.6 1E-14 3.5E-19 128.7 12.7 171 191-363 10-228 (232)
377 3tv3_H PGT128 heavy chain, IG 99.6 7E-15 2.4E-19 130.4 11.5 170 190-362 9-235 (239)
378 1ow0_A IG alpha-1 chain C regi 99.6 2.6E-16 8.7E-21 137.2 2.1 171 180-353 3-200 (214)
379 3qhz_H Human monoclonal antibo 99.6 6.8E-15 2.3E-19 129.9 11.3 171 98-270 7-227 (232)
380 3knb_A Titin; IG-like, titin, 99.6 1.2E-14 4.1E-19 109.4 10.9 91 273-364 5-99 (100)
381 3tv3_H PGT128 heavy chain, IG 99.6 8.7E-15 3E-19 129.7 11.8 170 98-269 7-234 (239)
382 4acp_A IG gamma-1 chain C regi 99.6 3.2E-15 1.1E-19 132.0 8.5 161 249-456 1-176 (240)
383 1ow0_A IG alpha-1 chain C regi 99.6 4.4E-16 1.5E-20 135.7 2.5 168 91-261 3-200 (214)
384 3o3u_N Maltose-binding peripla 99.6 1.4E-14 4.9E-19 146.0 13.8 161 99-261 374-566 (581)
385 3u2s_H PG9 heavy chain; greek 99.6 1.1E-14 3.9E-19 129.6 11.1 173 96-270 4-236 (248)
386 2aty_A Complement receptor chi 99.6 3.4E-14 1.2E-18 134.8 15.0 171 181-353 167-362 (376)
387 3n9g_H FAB fragment of MAB CR4 99.6 5.3E-14 1.8E-18 123.9 14.2 170 98-271 7-224 (230)
388 1iam_A ICAM-1, CD54, intercell 99.5 3.4E-14 1.2E-18 118.5 12.0 160 94-260 2-166 (185)
389 3shs_A HOC head outer capsid p 99.5 7.4E-13 2.5E-17 113.8 20.2 156 192-364 13-183 (304)
390 1wit_A Twitchin 18TH IGSF modu 99.5 2.9E-14 1E-18 106.0 10.0 90 273-363 2-93 (93)
391 3n9g_H FAB fragment of MAB CR4 99.5 1.2E-13 4E-18 121.7 15.4 171 190-364 9-225 (230)
392 3u2s_H PG9 heavy chain; greek 99.5 5.4E-14 1.8E-18 125.2 13.0 172 190-363 8-237 (248)
393 3sob_H Antibody heavy chain, l 99.5 8.9E-14 3E-18 124.6 13.5 169 98-270 30-249 (256)
394 3knb_B Obscurin-like protein 1 99.5 4E-14 1.4E-18 107.9 9.5 93 180-274 13-107 (107)
395 1iam_A ICAM-1, CD54, intercell 99.5 4.3E-13 1.5E-17 111.8 16.5 154 191-353 9-167 (185)
396 3iu4_H CHP3 FAB heavy chain; a 99.5 6.4E-14 2.2E-18 125.8 12.0 168 98-269 7-221 (263)
397 3kvq_A Vascular endothelial gr 99.5 2.8E-14 9.6E-19 109.4 8.1 100 266-366 3-102 (108)
398 2aty_A Complement receptor chi 99.5 9.6E-14 3.3E-18 131.7 13.2 167 92-260 167-361 (376)
399 1ypz_E T cell receptor delta, 99.5 1.4E-13 4.9E-18 118.9 13.1 161 188-354 8-199 (207)
400 2e7c_A Myosin-binding protein 99.5 8.6E-14 2.9E-18 108.5 10.5 95 272-366 20-117 (118)
401 3knb_A Titin; IG-like, titin, 99.5 3.4E-14 1.2E-18 107.0 7.6 86 89-176 3-98 (100)
402 2cqv_A MLCK, myosin light chai 99.5 3E-13 1E-17 104.7 13.0 94 273-367 7-102 (114)
403 3f8u_B Tapasin; endoplasmic re 99.5 3.2E-12 1.1E-16 118.8 21.7 173 187-359 164-399 (401)
404 2eo9_A Roundabout homolog 1; b 99.5 3.7E-14 1.3E-18 110.7 7.5 93 273-366 8-100 (118)
405 1ypz_E T cell receptor delta, 99.5 2.3E-13 8E-18 117.6 13.0 160 94-260 4-197 (207)
406 2v5y_A Receptor-type tyrosine- 99.5 9.4E-13 3.2E-17 136.3 19.7 160 196-366 91-262 (731)
407 3mlr_H Human monoclonal anti-H 99.5 1.6E-13 5.6E-18 120.4 12.0 164 98-265 7-219 (226)
408 3bn3_B ICAM-5, intercellular a 99.5 1.2E-13 4.2E-18 116.0 10.3 165 91-260 2-174 (196)
409 2edj_A Roundabout homolog 2; K 99.5 1.3E-13 4.3E-18 104.1 9.1 92 273-365 8-99 (100)
410 3iu4_H CHP3 FAB heavy chain; a 99.5 1.1E-13 3.8E-18 124.3 10.3 169 190-362 9-222 (263)
411 1g1c_A Immunoglobulin-like dom 99.5 4.5E-13 1.6E-17 100.8 11.3 91 273-364 5-98 (99)
412 3sob_H Antibody heavy chain, l 99.5 6.3E-13 2.2E-17 119.0 14.3 170 191-364 33-251 (256)
413 1u2h_A APEG-1, aortic preferen 99.5 3.3E-13 1.1E-17 101.6 10.5 91 273-364 5-98 (99)
414 3qp3_A Titin; I-SET IG-like, s 99.5 1.6E-13 5.3E-18 104.2 8.7 93 272-365 7-101 (103)
415 2yr3_A Myosin light chain kina 99.5 2E-13 6.8E-18 102.8 8.8 90 272-363 10-99 (99)
416 3mlr_H Human monoclonal anti-H 99.5 7.1E-13 2.4E-17 116.3 13.7 167 190-360 9-222 (226)
417 2kdg_A Myotilin; immonoglobuli 99.5 1.9E-13 6.7E-18 103.0 8.3 92 273-365 5-99 (100)
418 2kkq_A Myotilin; unknown funct 99.4 4.8E-13 1.7E-17 103.8 10.1 93 273-366 15-111 (116)
419 3irg_B Obscurin-like protein 1 99.4 5.2E-13 1.8E-17 102.0 9.7 93 273-366 13-107 (107)
420 1wwb_X Protein (brain derived 99.4 4.9E-13 1.7E-17 101.3 9.0 81 286-366 13-100 (103)
421 2bk8_A Connectin, M1, titin he 99.4 1.2E-12 4.1E-17 98.0 10.8 86 280-365 7-95 (97)
422 3u1s_H FAB PGT145 heavy chain; 99.4 1.9E-12 6.4E-17 116.6 13.9 172 93-269 26-262 (267)
423 1fhg_A Telokin; immunoglobulin 99.4 5.4E-13 1.9E-17 109.3 9.4 101 268-369 36-139 (154)
424 2eo9_A Roundabout homolog 1; b 99.4 8E-13 2.8E-17 103.0 9.8 91 89-181 6-102 (118)
425 1hxm_A Gamma-delta T-cell rece 99.4 1.9E-12 6.5E-17 113.4 13.2 156 94-259 4-197 (229)
426 1wit_A Twitchin 18TH IGSF modu 99.4 5.3E-13 1.8E-17 99.1 8.1 84 91-175 2-92 (93)
427 2dav_A SLOW MYBP-C, myosin-bin 99.4 1.1E-12 3.9E-17 101.6 10.1 89 276-365 10-112 (126)
428 3f8u_B Tapasin; endoplasmic re 99.4 5.6E-12 1.9E-16 117.2 16.5 160 97-259 164-388 (401)
429 3kvq_A Vascular endothelial gr 99.4 8.8E-13 3E-17 101.0 9.2 101 173-275 3-103 (108)
430 2cqv_A MLCK, myosin light chai 99.4 4E-12 1.4E-16 98.3 12.8 98 180-279 7-106 (114)
431 1he7_A High affinity nerve gro 99.4 7.1E-13 2.4E-17 102.6 8.4 80 287-366 13-101 (126)
432 1gxe_A Myosin binding protein 99.4 8.2E-13 2.8E-17 105.4 8.9 82 282-363 26-138 (139)
433 3caf_A Fibroblast growth facto 99.4 9.1E-13 3.1E-17 99.3 8.7 80 283-362 17-99 (100)
434 3s35_X Vascular endothelial gr 99.4 1.6E-12 5.3E-17 102.0 9.6 88 279-366 13-112 (122)
435 3puc_A Titin; I-SET IG-like do 99.4 2.3E-12 7.8E-17 96.9 10.1 91 273-364 6-98 (99)
436 3bn3_B ICAM-5, intercellular a 99.4 5.2E-12 1.8E-16 106.1 12.9 162 183-352 5-174 (196)
437 2ckn_A Basic fibroblast growth 99.4 1.7E-12 5.9E-17 96.7 9.0 79 281-362 16-94 (95)
438 3irg_A Titin; IG-like, titin, 99.4 3.4E-12 1.2E-16 96.0 10.8 83 282-364 13-99 (100)
439 1wwc_A Protein (NT-3 growth fa 99.4 9.7E-13 3.3E-17 102.5 7.7 96 267-366 2-103 (118)
440 2yr3_A Myosin light chain kina 99.4 1.3E-12 4.4E-17 98.2 8.1 85 89-175 9-98 (99)
441 2ckn_A Basic fibroblast growth 99.4 2.3E-12 7.9E-17 96.0 9.4 84 89-175 7-94 (95)
442 1gl4_B Basement membrane-speci 99.4 3.6E-12 1.2E-16 95.6 10.5 87 274-363 10-97 (98)
443 2dm3_A KIAA0992 protein, palla 99.4 6.4E-13 2.2E-17 102.1 6.4 93 273-366 9-104 (110)
444 2dm2_A Palladin; beta-sandwich 99.4 2E-12 6.8E-17 99.3 9.1 93 273-366 8-104 (110)
445 1g1c_A Immunoglobulin-like dom 99.4 1.8E-12 6.3E-17 97.4 8.7 85 90-176 4-97 (99)
446 1nct_A Titin; cell adhesion, g 99.4 9.1E-13 3.1E-17 100.4 6.7 90 273-363 14-105 (106)
447 2yuz_A Myosin-binding protein 99.4 1.8E-12 6.3E-17 97.4 8.1 84 279-366 12-97 (100)
448 2edj_A Roundabout homolog 2; K 99.4 3.6E-12 1.2E-16 96.0 9.7 93 179-274 7-100 (100)
449 3cx2_A Myosin-binding protein 99.4 5.4E-12 1.9E-16 96.5 10.7 89 274-363 5-107 (108)
450 3bfo_A Mucosa-associated lymph 99.3 6.2E-12 2.1E-16 92.8 10.5 83 90-175 2-85 (91)
451 1hxm_A Gamma-delta T-cell rece 99.3 9.6E-12 3.3E-16 108.9 13.4 160 188-352 8-198 (229)
452 1u2h_A APEG-1, aortic preferen 99.3 2.8E-12 9.7E-17 96.3 8.7 85 90-176 4-97 (99)
453 2yuz_A Myosin-binding protein 99.3 3E-12 1E-16 96.1 8.7 86 185-275 11-98 (100)
454 3qp3_A Titin; I-SET IG-like, s 99.3 3E-12 1E-16 97.0 8.8 85 90-176 7-99 (103)
455 2lu7_A Obscurin-like protein 1 99.3 1.9E-12 6.4E-17 93.5 7.2 78 282-364 4-83 (84)
456 2dav_A SLOW MYBP-C, myosin-bin 99.3 3.3E-12 1.1E-16 99.0 9.0 85 91-177 7-111 (126)
457 2ens_A Advanced glycosylation 99.3 3.5E-12 1.2E-16 95.2 8.6 85 88-176 7-92 (96)
458 2e7c_A Myosin-binding protein 99.3 5.9E-12 2E-16 98.0 10.0 93 180-274 21-117 (118)
459 1waa_A Titin; metal binding pr 99.3 5.4E-12 1.8E-16 93.3 9.1 82 89-176 3-91 (93)
460 3irg_B Obscurin-like protein 1 99.3 5.4E-12 1.8E-16 96.3 9.4 93 180-274 13-107 (107)
461 2cry_A KIN of IRRE-like protei 99.3 6.6E-14 2.3E-18 109.9 -1.6 102 263-366 4-115 (122)
462 2kkq_A Myotilin; unknown funct 99.3 9.2E-12 3.2E-16 96.5 10.5 95 180-276 15-113 (116)
463 1gl4_B Basement membrane-speci 99.3 1.2E-11 4E-16 92.7 10.6 87 89-176 7-97 (98)
464 2dm2_A Palladin; beta-sandwich 99.3 6.1E-12 2.1E-16 96.6 9.0 86 89-176 6-101 (110)
465 2edn_A Myosin-binding protein 99.3 2.9E-12 9.8E-17 98.2 6.9 85 281-365 19-117 (118)
466 2bk8_A Connectin, M1, titin he 99.3 1.9E-11 6.5E-16 91.3 11.2 84 187-271 7-93 (97)
467 2dm3_A KIAA0992 protein, palla 99.3 3.4E-12 1.2E-16 98.0 7.2 87 89-177 7-102 (110)
468 3bfo_A Mucosa-associated lymph 99.3 1.1E-11 3.7E-16 91.5 9.7 82 276-365 6-88 (91)
469 3s35_X Vascular endothelial gr 99.3 2.5E-11 8.6E-16 95.0 12.3 96 185-281 12-119 (122)
470 1nct_A Titin; cell adhesion, g 99.3 3.3E-12 1.1E-16 97.3 6.9 86 89-176 12-105 (106)
471 2cr3_A Basic fibroblast growth 99.3 3.9E-12 1.3E-16 95.5 7.1 81 283-366 12-92 (99)
472 2kdg_A Myotilin; immonoglobuli 99.3 1.2E-11 4E-16 93.1 9.8 92 180-273 5-99 (100)
473 2xot_A Amphoterin-induced prot 99.3 4.2E-12 1.4E-16 119.7 8.5 103 283-445 255-360 (361)
474 1x44_A Myosin-binding protein 99.3 9.6E-12 3.3E-16 94.2 8.8 84 278-366 11-98 (103)
475 3u1s_H FAB PGT145 heavy chain; 99.3 1.7E-11 5.8E-16 110.4 11.7 168 190-362 32-263 (267)
476 2yuv_A Myosin-binding protein 99.3 4.2E-11 1.4E-15 90.0 12.1 89 273-366 7-97 (100)
477 2cr6_A KIAA1556 protein, obscu 99.3 2.9E-12 9.8E-17 99.3 5.6 99 266-368 5-106 (115)
478 3puc_A Titin; I-SET IG-like do 99.3 2.1E-11 7.2E-16 91.5 10.3 90 180-271 6-97 (99)
479 2edh_A Obscurin; structural ge 99.3 1E-11 3.4E-16 95.9 8.7 100 260-366 5-107 (113)
480 2lvc_A Obscurin-like protein 1 99.3 9E-12 3.1E-16 91.5 7.9 84 274-362 4-91 (91)
481 3cx2_A Myosin-binding protein 99.3 1.1E-11 3.6E-16 94.8 8.6 86 90-176 3-107 (108)
482 2lu7_A Obscurin-like protein 1 99.3 1.1E-11 3.7E-16 89.5 7.7 77 190-272 5-83 (84)
483 3irg_A Titin; IG-like, titin, 99.3 9.1E-12 3.1E-16 93.7 7.6 85 90-176 4-98 (100)
484 2xot_A Amphoterin-induced prot 99.3 2E-11 6.8E-16 115.1 11.6 103 189-307 254-360 (361)
485 2lvc_A Obscurin-like protein 1 99.3 2.5E-11 8.5E-16 89.1 9.6 83 181-269 4-90 (91)
486 4hwu_A Fibroblast growth facto 99.3 9.6E-12 3.3E-16 92.6 7.3 82 281-366 8-89 (95)
487 2eny_A Obscurin; beta-sandwich 99.3 2.3E-11 8E-16 92.1 9.3 92 179-275 6-100 (104)
488 1he7_A High affinity nerve gro 99.3 2.5E-11 8.6E-16 93.9 9.3 81 195-276 14-103 (126)
489 1fhg_A Telokin; immunoglobulin 99.2 2.6E-11 8.9E-16 99.2 9.6 101 178-280 39-142 (154)
490 2edk_A Myosin-binding protein 99.2 3E-12 1E-16 96.6 3.5 82 280-366 14-101 (101)
491 3m45_A Cell adhesion molecule 99.2 4.5E-11 1.6E-15 91.2 10.1 92 273-366 6-108 (108)
492 1waa_A Titin; metal binding pr 99.2 6.8E-11 2.3E-15 87.3 10.7 82 185-272 9-92 (93)
493 2eny_A Obscurin; beta-sandwich 99.2 1.5E-11 5.3E-16 93.1 7.3 91 272-366 6-99 (104)
494 1gxe_A Myosin binding protein 99.2 3.6E-11 1.2E-15 95.8 9.8 83 188-271 25-138 (139)
495 2cr6_A KIAA1556 protein, obscu 99.2 1.4E-11 4.9E-16 95.3 7.1 97 179-280 11-110 (115)
496 2yuv_A Myosin-binding protein 99.2 1.1E-10 3.9E-15 87.6 11.8 90 180-275 7-98 (100)
497 2edf_A Obscurin; beta-sandwich 99.2 1.7E-11 5.7E-16 92.8 7.1 87 274-366 9-97 (103)
498 2cpc_A KIAA0657 protein; immun 99.2 8.5E-11 2.9E-15 90.6 11.0 96 179-280 9-108 (113)
499 2edn_A Myosin-binding protein 99.2 4.8E-11 1.6E-15 91.3 9.3 92 181-273 12-117 (118)
500 1zxq_A ICAM-2, intercellular a 99.2 6.6E-11 2.3E-15 98.3 10.7 162 91-259 2-172 (192)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=3.5e-49 Score=398.18 Aligned_cols=427 Identities=22% Similarity=0.327 Sum_probs=329.9
Q ss_pred cceeeeccceEEEEecCcEEEEEEeee-CCccEEEeccchhhh--------------------------heeeeeeeec-
Q psy17058 37 TQFVSAENHEVTVYEGGDAELKCNTYY-APGRWMWLNFYSFLS--------------------------LIIICLAYLS- 88 (471)
Q Consensus 37 ~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~~~w~~~~~~~~--------------------------~~~~c~~~~~- 88 (471)
++.+...++++.+.+|+.++|.|.+.. +.+.+.|++++..+. ..|.|.+...
T Consensus 5 pP~f~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 84 (570)
T 3b43_A 5 PPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSV 84 (570)
T ss_dssp CCEEEECCCCEEECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCcceEECCceEEcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCC
Confidence 455667788999999999999999984 667999998754331 1367876521
Q ss_pred --------------CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-------cCcEEEEcC
Q psy17058 89 --------------PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-------AGETLIING 146 (471)
Q Consensus 89 --------------~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-------~~~~L~i~~ 146 (471)
..+|.+...+.+..+.+|+++.|.|. .+.|.+.+.|+|+ +..+..... ....|.|.+
T Consensus 85 g~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~i~~ 163 (570)
T 3b43_A 85 GAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKD-GELLKDDANLQTSFIHNVATLQILQ 163 (570)
T ss_dssp EEEEEEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEET-TEECCCCSSEEEEEETTEEEEEESS
T ss_pred ceEEEEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEEC-CEECcCCCCEEEEEECCEEEEEECc
Confidence 23555655666788889999999999 8888899999999 666543321 346899999
Q ss_pred CCCCCCeEEEEEEEecCCceeeeeEEEEEeecc-CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc
Q psy17058 147 ITKADEGVYICSIQNAQGNVFQDYASIQVDKRE-MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF 225 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~-~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~ 225 (471)
++.+|+|.|+|.|.|..|. ....+.+.|.... +|.+...+ ....+.+|+.++|.|.+ .+.|.+.++|+|++..+..
T Consensus 164 ~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~pp~~~~~p-~~~~v~~G~~~~l~C~~-~g~p~p~i~W~k~g~~i~~ 240 (570)
T 3b43_A 164 TDQSHVGQYNCSASNPLGT-ASSSAKLTLSEHEVPPFFDLKP-VSVDLALGESGTFKCHV-TGTAPIKITWAKDNREIRP 240 (570)
T ss_dssp CCGGGCEEEEEEEEETTEE-EEEEEEEEEECCCCCCEEEECC-CCBCCBSBSCEEEEEEE-ESSSCCEEEEEETTEECCT
T ss_pred CChHHCEEEEEEEEeCCcE-EEEEEEEEEcCCCCCCccccCC-ceeEecCCCeEEEEEEE-EECCCCEEEEEECCEECcC
Confidence 9999999999999998877 5666777776433 44444444 34567899999999999 7888899999999987665
Q ss_pred CCCceEE--eeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCC
Q psy17058 226 GPDVEVY--QELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPM 303 (471)
Q Consensus 226 ~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~ 303 (471)
..++.+. .....|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.+.........+.+|+.+.|.|.+.|.|.
T Consensus 241 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~ 320 (570)
T 3b43_A 241 GGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPE 320 (570)
T ss_dssp TSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSS
T ss_pred CCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCC
Confidence 5554443 23467999999999999999999999999888999999998887665444446789999999999999999
Q ss_pred CeEEEEeCCccCCCcc--cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCcccc
Q psy17058 304 PTVSWVKYIAPFDRNL--ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILP 381 (471)
Q Consensus 304 ~~i~W~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~ 381 (471)
+.+.|++++..+.... ..........|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.+..... .....
T Consensus 321 p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~---~~~~~ 397 (570)
T 3b43_A 321 IKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPH---PVETL 397 (570)
T ss_dssp CEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCC---CEEEC
T ss_pred CEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCC---ceeec
Confidence 9999999998876432 222234567899999999999999999999999999999999998875432211 11111
Q ss_pred CCC----------------cc---cCCCCCCC------------ceEEEcCCcce--EEe----------------eecC
Q psy17058 382 DGD----------------EY---YRPEPEEG------------EYVYAVGSNAS--ISC----------------SVEP 412 (471)
Q Consensus 382 ~~~----------------~w---~~~~~~~~------------~~~~~~~~~~~--y~c----------------~~~~ 412 (471)
.|. +| +.++..+. +.|.++..+|+ |+| +..+
T Consensus 398 ~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~ 477 (570)
T 3b43_A 398 KGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAP 477 (570)
T ss_dssp TTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCC
T ss_pred CCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccC
Confidence 222 77 33333222 25778888888 999 6679
Q ss_pred CeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCC-CCce--EE----ecCeEEECCCC
Q psy17058 413 PRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYF-PSHV--VE----YNGELRLGPHK 470 (471)
Q Consensus 413 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l-~~~~--~~----~~~~l~i~~~~ 470 (471)
|.|...+.+..+.+|+.+.|.|.+.|.|++.|+|+|||..+ ..+. .+ ..++|.|.+++
T Consensus 478 P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 542 (570)
T 3b43_A 478 PRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAE 542 (570)
T ss_dssp CEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCC
T ss_pred CcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCC
Confidence 99999888889999999999999999999999999998544 3322 22 23578888765
No 2
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=2.2e-43 Score=361.56 Aligned_cols=433 Identities=18% Similarity=0.277 Sum_probs=308.9
Q ss_pred CCCCCeeeecccc-------cccccccccccceeeeccceEEEEecCcEEEEEEeeeCCccEEEeccchhhh--------
Q psy17058 14 SNQGNALTTTPSR-------QETNAFAGEVTQFVSAENHEVTVYEGGDAELKCNTYYAPGRWMWLNFYSFLS-------- 78 (471)
Q Consensus 14 ~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~~w~~~~~~~~-------- 78 (471)
+..|.+.+..... ...+.+....+...........+.+|+.++|.|.+..+...+.|++++..+.
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~p~~~v~W~~~g~~l~~~~~~~~~ 160 (642)
T 1e07_A 81 NDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAFTCEPETQDATYLWWVNNQSLPVSPRLQLS 160 (642)
T ss_pred ccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEccCceeEecCCcEEEEEECCCCCeeEEEEECCeECCCCCceEEc
Confidence 5667777765332 1223343322233333344567899999999999998888999987543221
Q ss_pred ----------------heeeeeeeec--------------CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeC
Q psy17058 79 ----------------LIIICLAYLS--------------PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKD 127 (471)
Q Consensus 79 ----------------~~~~c~~~~~--------------~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~ 127 (471)
..|.|.+... ..|+.+.+.|....+.+|+.+.|.|. .+.|.+.+.|+++
T Consensus 161 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~ 240 (642)
T 1e07_A 161 NGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVN 240 (642)
T ss_pred CCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEEC
Confidence 2367877532 12333445566778999999999999 8899999999999
Q ss_pred CCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccC-CeeeecCCCceeEEcCCeEEEEEEcc
Q psy17058 128 NQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKREM-PRIRIHPNASQTFIVGDRADIQCVLE 206 (471)
Q Consensus 128 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~-p~~~~~~~~~~~v~~g~~~~L~C~~~ 206 (471)
+..+. ....|.|.+++.+|+|.|+|.+.|..+. ......+.|.+..+ +...+.......+..|+.++|.|.+
T Consensus 241 -g~~i~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~s~~~~v~v~~~~~~p~i~~~~~~~~~~g~~v~l~C~~- 313 (642)
T 1e07_A 241 -GTFQQ----STQELFIPNITVNNSGSYTCQAHNSDTG-LNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEP- 313 (642)
T ss_pred -CeEcc----cCCceEEecccccCCeEEEEEEEeCCCc-eEEeeeEEEEEEccCCCCEEEcCCceeEecCCcEEEEEEC-
Confidence 65553 3467999999999999999999998776 33333444443332 1222223334455668889999999
Q ss_pred CCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCc-eEEEEEEEEEeCCceeeCCCccEE
Q psy17058 207 AGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGK-EVMNAYIHVLTLPAVTITPSEYVS 285 (471)
Q Consensus 207 ~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~p~~~~~~~~~~~ 285 (471)
.+.| +.+.|++++..+....++.+...++.|.|.++..+|+|.|+|.+.|..+. .+..+.|.|..+|...........
T Consensus 314 ~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~ 392 (642)
T 1e07_A 314 EIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTY 392 (642)
T ss_pred CCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceE
Confidence 5555 69999999988777777766666788999999999999999999998876 356688888877764333334567
Q ss_pred ecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEE--EEEEEe
Q psy17058 286 VRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKV--ITVAVE 363 (471)
Q Consensus 286 ~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~V~ 363 (471)
+.+|+.+.|.|.+.|+|.+.+.|+++|..+. ....|.|.++..+|+|.|+|.|.|..|....+ +.|.|.
T Consensus 393 ~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~---------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~ 463 (642)
T 1e07_A 393 YRPGVNLSLSCHAASNPPAQYSWLIDGNIQQ---------HTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVS 463 (642)
T ss_pred ecCCCcEEEEEEcCccCCCeEEEEECCEEcC---------CCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEe
Confidence 8899999999999999999999999987653 23579999999999999999999999877554 555555
Q ss_pred cCCCCCCCCCCCCCccccCCC---------------cc---cCCCC----------CCCceEEEcCCcce--EEe-----
Q psy17058 364 HRPEYGPISPRPGADILPDGD---------------EY---YRPEP----------EEGEYVYAVGSNAS--ISC----- 408 (471)
Q Consensus 364 ~~p~~~~~~~~~~~~~~~~~~---------------~w---~~~~~----------~~~~~~~~~~~~~~--y~c----- 408 (471)
..+..+.+.... ......|+ .| +.++. .+.+.|.++..+|+ |+|
T Consensus 464 ~~~~~p~i~~~~-~~~v~~g~~v~l~C~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 542 (642)
T 1e07_A 464 AELPKPSISSNN-SKPVEDKDAVAFTCEPEAQNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNS 542 (642)
T ss_pred ccCCCceEecCC-ceeecCCCeEEEEEECCCCCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcC
Confidence 432111111111 11111222 67 22322 22348889998888 999
Q ss_pred ------------ee-cCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEEecCeEEECCC
Q psy17058 409 ------------SV-EPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVEYNGELRLGPH 469 (471)
Q Consensus 409 ------------~~-~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~~~~~l~i~~~ 469 (471)
+. .|+.+...+.+..+.+|+.+.|.|.+.|.|+|.|+|+|||.+|..+ ++|.|.++
T Consensus 543 ~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~-----~~L~i~~~ 611 (642)
T 1e07_A 543 VSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHT-----QVLFIAKI 611 (642)
T ss_pred CCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccC-----ceEEECcc
Confidence 22 2444666677788999999999999999999999999999988653 45666554
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=3e-44 Score=362.17 Aligned_cols=376 Identities=20% Similarity=0.348 Sum_probs=288.1
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-------cCcEEEEcCCCCCCCeEEEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-------AGETLIINGITKADEGVYICSIQ 160 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~~ 160 (471)
..||.|...+..+.+.+|+++.|.|. .+.|.+.+.|+|+ +..+..... ...+|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~pP~f~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (570)
T 3b43_A 3 MEPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKE-HTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAE 81 (570)
T ss_dssp CCCCEEEECCCCEEECTTSCEEEEEEEESSSSCEEEEECS-SSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCcceEECCceEEcCCCEEEEEEEEccCCCCEEEEEEC-CEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEE
Confidence 35788877788899999999999999 8889999999999 555543221 34689999999999999999999
Q ss_pred ecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceE--EeeeceE
Q psy17058 161 NAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEV--YQELGVL 238 (471)
Q Consensus 161 ~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~--~~~~~~l 238 (471)
|..|. ......+.|.....|...........+.+|+.++|.|.+ .+.|.+.++|+|++..+....+... ......|
T Consensus 82 N~~g~-~~~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L 159 (570)
T 3b43_A 82 NSVGA-VASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRI-NGSEPLQVSWYKDGELLKDDANLQTSFIHNVATL 159 (570)
T ss_dssp ETTEE-EEEEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEE-ESSSSCEEEEEETTEECCCCSSEEEEEETTEEEE
T ss_pred eCCce-EEEEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEE-ccCCCCEEEEEECCEECcCCCCEEEEEECCEEEE
Confidence 98876 555556666533223233333445567789999999999 7788899999999987655544332 2224679
Q ss_pred EEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccC
Q psy17058 239 RFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPF 315 (471)
Q Consensus 239 ~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~ 315 (471)
.|.++..+|+|.|+|.|.|..|....+..|.|.. +|.+...+ ....+.+|+++.|.|.+.|.|.+.+.|++++..+
T Consensus 160 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p-~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i 238 (570)
T 3b43_A 160 QILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKP-VSVDLALGESGTFKCHVTGTAPIKITWAKDNREI 238 (570)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECC-CCBCCBSBSCEEEEEEEESSSCCEEEEEETTEEC
T ss_pred EECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCC-ceeEecCCCeEEEEEEEEECCCCEEEEEECCEEC
Confidence 9999999999999999999988887777777763 45555444 3456889999999999999999999999999887
Q ss_pred CCcc--cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCC---------
Q psy17058 316 DRNL--ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGD--------- 384 (471)
Q Consensus 316 ~~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~--------- 384 (471)
.... ..........|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|.+...... ......|+
T Consensus 239 ~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~--~~~v~~g~~~~l~C~~~ 316 (570)
T 3b43_A 239 RPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEP--SRIVKQDEHTRYECKIG 316 (570)
T ss_dssp CTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCS--BCCEESSCEEEEEEEEE
T ss_pred cCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCC--ccEEcCCCcEEEEEEEe
Confidence 5432 2222345678999999999999999999999999999999999888754322111 01111222
Q ss_pred -------cc---cCCCCCC------------CceEEEcCCcce--EEe----------------eecCCeeEEcCCeeee
Q psy17058 385 -------EY---YRPEPEE------------GEYVYAVGSNAS--ISC----------------SVEPPRITLRPVRQTV 424 (471)
Q Consensus 385 -------~w---~~~~~~~------------~~~~~~~~~~~~--y~c----------------~~~~p~~~~~~~~~~~ 424 (471)
.| +.++..+ .+.|.++..+|+ |+| +..+|.|...+....+
T Consensus 317 g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~ 396 (570)
T 3b43_A 317 GSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVET 396 (570)
T ss_dssp SSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEE
T ss_pred eCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceee
Confidence 77 2222222 136788888888 999 6778999888888889
Q ss_pred eCCCeEEEEEEecccCCceEEEecCCCCCCCceEE----ec--CeEEECCCC
Q psy17058 425 KPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVE----YN--GELRLGPHK 470 (471)
Q Consensus 425 ~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~----~~--~~l~i~~~~ 470 (471)
.+|+.+.|.|.+.|.|+|.|+|+|||.+|..+.++ .+ ++|.|.+++
T Consensus 397 ~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~ 448 (570)
T 3b43_A 397 LKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVD 448 (570)
T ss_dssp CTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCC
T ss_pred cCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCC
Confidence 99999999999999999999999999999765433 22 478888775
No 4
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=2.4e-42 Score=331.20 Aligned_cols=330 Identities=21% Similarity=0.337 Sum_probs=251.2
Q ss_pred CCCCcEEEcCCceee---cCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-----cCcEEEEcCC-CCCCCeEEEEE
Q psy17058 89 PQANEVQVTPRQQSA---PEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-----AGETLIINGI-TKADEGVYICS 158 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v---~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-----~~~~L~i~~v-~~~D~G~Y~C~ 158 (471)
..+|.|..+|.+..+ .+|+.+.|.|. .+.|.+.++|+|+ +..+..... .++.|.|.++ +.+|+|.|+|.
T Consensus 3 ~~~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~-g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~ 81 (384)
T 3kld_A 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLN-GTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCI 81 (384)
T ss_dssp CEEEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEET-TEECCC----CEEEETTEEEEESCCHHHHCEEEEEE
T ss_pred CCCCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEEC-CEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEE
Confidence 346778888887766 68999999999 8899999999999 665543211 4567878776 78999999999
Q ss_pred EEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceE
Q psy17058 159 IQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVL 238 (471)
Q Consensus 159 ~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l 238 (471)
|.|..|...+....+.+.. .+.+.........+.+|+.+.|.|....+.|.+.+.|++++..+....+.......+.|
T Consensus 82 A~N~~G~~~s~~~~l~v~~--~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L 159 (384)
T 3kld_A 82 ATNSFGTIVSREAKLQFAY--LENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNL 159 (384)
T ss_dssp EEETTEEEECCCEEEEEEE--ECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCE
T ss_pred EEcCcccEEecceEEEEec--ccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcE
Confidence 9998876444455555542 22222333345678899999999987445677899999998764444443334446689
Q ss_pred EEeccCCCCCeEEEEEEEcCCCceEEE---EEEEEE-------eCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEE
Q psy17058 239 RFNNIATGDEGKYTCIAENSAGKEVMN---AYIHVL-------TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSW 308 (471)
Q Consensus 239 ~i~~~~~~d~G~Y~C~~~~~~~~~~~~---~~l~V~-------~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W 308 (471)
.|.+++.+|+|.|+|.+.|..+..... ..+.+. ..|.+.+.......+.+|+++.|.|.+.|.|.|.+.|
T Consensus 160 ~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W 239 (384)
T 3kld_A 160 YIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILW 239 (384)
T ss_dssp EESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEE
T ss_pred EEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEE
Confidence 999999999999999999987654321 122221 2344444444456788999999999999999999999
Q ss_pred EeCC-ccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCccc
Q psy17058 309 VKYI-APFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYY 387 (471)
Q Consensus 309 ~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~ 387 (471)
++++ ..+..... .....+.|.|.+++.+|+|.|+|.|.|..|.......|.|..+
T Consensus 240 ~k~~~~~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~---------------------- 295 (384)
T 3kld_A 240 RRADGKPIARKAR--RHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQ---------------------- 295 (384)
T ss_dssp EETTCCCCCTTCE--ECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE----------------------
T ss_pred EeCCCccccccce--ecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecC----------------------
Confidence 9954 44433222 2345678999999999999999999999999998899988764
Q ss_pred CCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCce--EEecCeEE
Q psy17058 388 RPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHV--VEYNGELR 465 (471)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~--~~~~~~l~ 465 (471)
|.+...+.+..+.+|+.+.|.|.+.|.|.|.|+|+|||.+|..+. ...+++|.
T Consensus 296 -------------------------P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~ 350 (384)
T 3kld_A 296 -------------------------PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLN 350 (384)
T ss_dssp -------------------------EEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEE
T ss_pred -------------------------CccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEE
Confidence 677777878899999999999999999999999999999986654 34678999
Q ss_pred ECCCC
Q psy17058 466 LGPHK 470 (471)
Q Consensus 466 i~~~~ 470 (471)
|.+++
T Consensus 351 i~~v~ 355 (384)
T 3kld_A 351 ITIVN 355 (384)
T ss_dssp ESSCC
T ss_pred EeecC
Confidence 98875
No 5
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.9e-41 Score=356.69 Aligned_cols=379 Identities=22% Similarity=0.387 Sum_probs=298.8
Q ss_pred cceeeeccceEEEEecCcEEEEEEee-eCCccEEEeccchhhh----------------heeeeeeee------------
Q psy17058 37 TQFVSAENHEVTVYEGGDAELKCNTY-YAPGRWMWLNFYSFLS----------------LIIICLAYL------------ 87 (471)
Q Consensus 37 ~~~~~~~~~~~~v~~g~~~~l~C~~~-~~~~~~~w~~~~~~~~----------------~~~~c~~~~------------ 87 (471)
++.+...+....+.+|+.++|.|.+. .+...+.|++++..+. ..|.|.+..
T Consensus 343 ~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 422 (816)
T 3dmk_A 343 PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELK 422 (816)
T ss_dssp EEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEE
T ss_pred CCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEE
Confidence 34455566788999999999999998 5667899998765432 247887652
Q ss_pred ---cCCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc------------cCcEEEEcCCCCCC
Q psy17058 88 ---SPQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI------------AGETLIINGITKAD 151 (471)
Q Consensus 88 ---~~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~------------~~~~L~i~~v~~~D 151 (471)
...+|.+...+....+.+|+.+.|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|
T Consensus 423 v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~-g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 501 (816)
T 3dmk_A 423 LGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELD-GKKIANNDRYQVGQYVTVNGDVVSYLNITSVHAND 501 (816)
T ss_dssp CCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEET-TEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTT
T ss_pred EccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEEC-CEECCCCCCcccccEEecCCCcEEEEEEeeccccC
Confidence 145777877788889999999999999 8899999999999 555543221 12369999999999
Q ss_pred CeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceE
Q psy17058 152 EGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEV 231 (471)
Q Consensus 152 ~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~ 231 (471)
+|.|+|.|.|..+. ......+.|. .+|.+ .......+.+|+.++|.|.+ .+.|.+.+.|++++..+....+...
T Consensus 502 ~G~Y~C~a~n~~g~-~~~~~~l~V~--~~p~~--~~~~~~~v~~G~~v~l~C~~-~g~p~~~i~W~k~~~~l~~~~~~~~ 575 (816)
T 3dmk_A 502 GGLYKCIAKSKVGV-AEHSAKLNVY--GLPYI--RQMEKKAIVAGETLIVTCPV-AGYPIDSIVWERDNRALPINRKQKV 575 (816)
T ss_dssp CEEEEEEEEETTEE-EEEEEEEEEC--SSCEE--CCCCCEEEETTCCEEEECCE-ECSSEEEEEEEETTEESCCSTTEEE
T ss_pred CEEEEEEEEECCCe-EEEEEEEEEe--cCCee--EccCCeEEecCCeEEEEEEe-cCCCCCEEEEEECCeEcccCCceEE
Confidence 99999999998876 5555555554 55543 23344578899999999999 7788889999999988766655554
Q ss_pred EeeeceEEEeccC-CCCCeEEEEEEEcCCCc-eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCC-eEEE
Q psy17058 232 YQELGVLRFNNIA-TGDEGKYTCIAENSAGK-EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMP-TVSW 308 (471)
Q Consensus 232 ~~~~~~l~i~~~~-~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~i~W 308 (471)
.. ++.|.|.++. ..|+|.|+|.+.|..|. .+..+.+.|..+|.+.........+.+|+.+.|.|.+.+.+.+ .+.|
T Consensus 576 ~~-~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W 654 (816)
T 3dmk_A 576 FP-NGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDW 654 (816)
T ss_dssp CT-TSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEE
T ss_pred ec-CCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEE
Confidence 44 6789999998 58999999999998875 4557788888887765444344567899999999999876655 9999
Q ss_pred EeCCccCCCccc---ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCc
Q psy17058 309 VKYIAPFDRNLE---RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDE 385 (471)
Q Consensus 309 ~~~~~~~~~~~~---~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~ 385 (471)
++++..+..... .......+.|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 655 ~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~--------------------- 713 (816)
T 3dmk_A 655 TLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYV--------------------- 713 (816)
T ss_dssp EETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEE---------------------
T ss_pred EECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEe---------------------
Confidence 999988753321 11223567899999999999999999999999999999998876
Q ss_pred ccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCc---------
Q psy17058 386 YYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSH--------- 456 (471)
Q Consensus 386 w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~--------- 456 (471)
+|.+...+.+..+.+|+.+.|.|.+.|.|+|.|+|+|+|..+...
T Consensus 714 --------------------------~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~ 767 (816)
T 3dmk_A 714 --------------------------PPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDN 767 (816)
T ss_dssp --------------------------EEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTT
T ss_pred --------------------------CCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCC
Confidence 478888888889999999999999999999999999998765432
Q ss_pred eEEecCeEEECCCC
Q psy17058 457 VVEYNGELRLGPHK 470 (471)
Q Consensus 457 ~~~~~~~l~i~~~~ 470 (471)
....+++|.|.+++
T Consensus 768 ~~~~~~~L~i~~v~ 781 (816)
T 3dmk_A 768 IRVEEGTLHVDNIQ 781 (816)
T ss_dssp EEEETTEEEECSCC
T ss_pred EEecCCEEEECcCC
Confidence 23467899998875
No 6
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=2.5e-41 Score=337.91 Aligned_cols=360 Identities=17% Similarity=0.280 Sum_probs=272.1
Q ss_pred ccceeeeccceEEEEecCcEEEEEEeeeCCccEEEeccchhhh------------------heeeeeeee---------c
Q psy17058 36 VTQFVSAENHEVTVYEGGDAELKCNTYYAPGRWMWLNFYSFLS------------------LIIICLAYL---------S 88 (471)
Q Consensus 36 ~~~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~~w~~~~~~~~------------------~~~~c~~~~---------~ 88 (471)
.|+.+......+.+.+|+.++|.|.+.. .+.|++....+. ..|.|.+.. .
T Consensus 35 ~pP~i~~~~~~~~v~~G~~v~l~C~~~~---~v~W~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ng~~~~~~l~V 111 (524)
T 2ec8_A 35 SPPSIHPGKSDLIVRVGDEIRLLCTDPG---FVKWTFEILDETNENKQNEWITEKAEATNTGKYTCTNKHGLSNSIYVFV 111 (524)
T ss_dssp CCCEEESCCSEEECCTTSCEEEEEECTT---EEEEEEESSSCCEEECSSEEEESSCCSTTCEEEEEEETTSCEEEEEEEC
T ss_pred CCCccCCCCceEEEeCCCeEEEEEeCCc---eEEEcCCCccccccCccceEEEcccchhhCEEEEEeecCCcceEEEEEE
Confidence 3445555667899999999999999865 899998664321 236887732 1
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc----cCcEEEEcCCCCCCCe-EEEEEEEec
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI----AGETLIINGITKADEG-VYICSIQNA 162 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G-~Y~C~~~~~ 162 (471)
..++.+...+....+.+|+.+.|.|. .+.+.+.+.|++.++..+..... ..+.|.|.+++.+|+| .|+|.+.|.
T Consensus 112 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~ 191 (524)
T 2ec8_A 112 RDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQE 191 (524)
T ss_dssp CCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC--
T ss_pred CCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEEC
Confidence 23344446677888999999999999 66666899999954776654322 5678999999999999 999999987
Q ss_pred CCceeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCe-EEEEeCCCCC--CcCCCceE-----E
Q psy17058 163 QGNVFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPT-QTWIRPDNDG--KFGPDVEV-----Y 232 (471)
Q Consensus 163 ~~~~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~-v~W~~~~~~~--~~~~~~~~-----~ 232 (471)
.+...+....|.|.. ..+|.+...+. ...+.+|+.++|.|.+ .+.|.+. +.|++++..+ .......+ .
T Consensus 192 ~~~~~s~~~~l~V~~~~~~~p~i~~~~~-~~~v~~G~~v~L~C~~-~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~ 269 (524)
T 2ec8_A 192 GKSVLSEKFILKVRPAFKAVPVVSVSKA-SYLLREGEEFTVTCTI-KDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNY 269 (524)
T ss_dssp --CCCCCCEECCEECCCCSCCEEECSCS-EEEEETTSCEEEEEEE-EESSTTCEEEEEETTCSCCCCEEEEEEECSSSCE
T ss_pred CceEEEEEEEEEEEeCCCCCCcEEecCC-cceEEcCCcEEEEEEE-ecCCCcEEEEEEeCCCCCccccccccccccCCcc
Confidence 665333345555541 24566655544 4578899999999999 5677665 9999999873 22221111 2
Q ss_pred eeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCC--ccEEecCCCcEEEEEEEeecCCCe-EEEE
Q psy17058 233 QELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPS--EYVSVRPGEPLTLECEATGRPMPT-VSWV 309 (471)
Q Consensus 233 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~--~~~~~~~g~~v~l~C~~~g~p~~~-i~W~ 309 (471)
...+.|.|.+++.+|+|.|+|.+.|..|.....+.|.|..+|.+...+. ....+.+|+.+.|.|.+.|+|.+. +.|+
T Consensus 270 ~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~ 349 (524)
T 2ec8_A 270 ERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWI 349 (524)
T ss_dssp EEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEE
T ss_pred ceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEE
Confidence 2356899999999999999999999999988899999999998876543 356899999999999999999998 9999
Q ss_pred eCCccCCCccccc-cc------CceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccC
Q psy17058 310 KYIAPFDRNLERD-EL------TSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPD 382 (471)
Q Consensus 310 ~~~~~~~~~~~~~-~~------~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~ 382 (471)
+++..+....... .. .....|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 350 k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~----------------- 412 (524)
T 2ec8_A 350 YMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTK----------------- 412 (524)
T ss_dssp SSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEE-----------------
T ss_pred ECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecC-----------------
Confidence 9998876443111 11 13579999999999999999999999999999999999764
Q ss_pred CCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCC
Q psy17058 383 GDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYF 453 (471)
Q Consensus 383 ~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l 453 (471)
|.|...+. ..+| .|.|.+.|+|+|.|+|+|||..+
T Consensus 413 ------------------------------P~i~~~~~---~~~g---~l~C~~~g~P~p~i~W~~~~~~~ 447 (524)
T 2ec8_A 413 ------------------------------PEILTYDR---LVNG---MLQCVAAGFPEPTIDWYFCPGTE 447 (524)
T ss_dssp ------------------------------EEEEEEEC---CSSS---CEEEEEEEESCCEEECCCC----
T ss_pred ------------------------------CeEeeccc---CcCc---EEEEEEEeecCCEEEEEECCCcc
Confidence 67765543 3455 99999999999999999998765
No 7
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=4e-41 Score=322.79 Aligned_cols=328 Identities=21% Similarity=0.312 Sum_probs=256.9
Q ss_pred CCCCcEEEcCCceee---cCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCc----c-cCcEEEEcCCCC-CCCeEEEEE
Q psy17058 89 PQANEVQVTPRQQSA---PEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNM----I-AGETLIINGITK-ADEGVYICS 158 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v---~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~----~-~~~~L~i~~v~~-~D~G~Y~C~ 158 (471)
..+|.|...|.+..+ .+|++++|.|. .+.|.+.+.|+++ +..+.... . .++.|.|.++.. +|+|.|+|.
T Consensus 2 ~~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~-g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 80 (382)
T 1cs6_A 2 SYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMN-GTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCV 80 (382)
T ss_dssp CEEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEET-TEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEE
T ss_pred CCCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEEC-CEECCcCCCccEEeeCCeEEEecccccccCEEEEEE
Confidence 357889999988876 78999999999 7788899999999 55554321 1 467899999997 999999999
Q ss_pred EEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc--CCCceEEeeec
Q psy17058 159 IQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF--GPDVEVYQELG 236 (471)
Q Consensus 159 ~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~--~~~~~~~~~~~ 236 (471)
+.|..|...+....+.|.. .|.+.........+.+|+.++|.|.+..+.|.+.+.|++++..+.. ..+.......+
T Consensus 81 a~n~~g~~~s~~~~l~v~~--~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 158 (382)
T 1cs6_A 81 ATNARGTVVSREASLRFGF--LQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTG 158 (382)
T ss_dssp EEETTEEEECCCEEEEEEE--ECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTC
T ss_pred EEcCCcEEEecceEEEeec--cccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCce
Confidence 9998775333345566553 2333333344567889999999999756678899999999876433 22333333356
Q ss_pred eEEEeccCCCCCeEEEEEEEcCCCceEE-----EEEEEEE------eCCceeeCCCccEEecCCCcEEEEEEEeecCCCe
Q psy17058 237 VLRFNNIATGDEGKYTCIAENSAGKEVM-----NAYIHVL------TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPT 305 (471)
Q Consensus 237 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-----~~~l~V~------~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~ 305 (471)
.|.|.+++.+|+|.|+|.+.|..+.... .+.|.+. .+|.+.........+.+|+.+.|.|.+.|.|.+.
T Consensus 159 ~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~ 238 (382)
T 1cs6_A 159 NLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQ 238 (382)
T ss_dssp CEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCE
T ss_pred EEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCE
Confidence 8999999999999999999987653222 2344443 2455555444466889999999999999999999
Q ss_pred EEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCc
Q psy17058 306 VSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDE 385 (471)
Q Consensus 306 i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~ 385 (471)
+.|++++..+... .......|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 239 i~W~~~~~~~~~~----~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-------------------- 294 (382)
T 1cs6_A 239 IKWRKLDGSQTSK----WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQ-------------------- 294 (382)
T ss_dssp EEEEECCSCCSCC----CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE--------------------
T ss_pred EEEEECCcccccE----EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecC--------------------
Confidence 9999988776432 2345678999999999999999999999999999999998864
Q ss_pred ccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceE--EecCe
Q psy17058 386 YYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVV--EYNGE 463 (471)
Q Consensus 386 w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~--~~~~~ 463 (471)
|.+...+....+.+|+.+.|.|.+.|.|.+.++|+|||.+|..+.+ ..+++
T Consensus 295 ---------------------------p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~ 347 (382)
T 1cs6_A 295 ---------------------------PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGE 347 (382)
T ss_dssp ---------------------------EEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTE
T ss_pred ---------------------------CCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCE
Confidence 6777777788899999999999999999999999999999976644 36789
Q ss_pred EEECCCC
Q psy17058 464 LRLGPHK 470 (471)
Q Consensus 464 l~i~~~~ 470 (471)
|.|.+++
T Consensus 348 L~i~~v~ 354 (382)
T 1cs6_A 348 LRFSKLV 354 (382)
T ss_dssp EEESSCC
T ss_pred EEECcCC
Confidence 9998875
No 8
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-40 Score=320.48 Aligned_cols=332 Identities=21% Similarity=0.326 Sum_probs=256.8
Q ss_pred cCCCCcEEEcCCceeecCCCcEEEEee-C-CCCCCeEEEEeCCCCCCCCCc----c--cCcEEEEcCC-----CCCCCeE
Q psy17058 88 SPQANEVQVTPRQQSAPEGSQVTIECK-S-NDPSATIKWSKDNQEQLPPNM----I--AGETLIINGI-----TKADEGV 154 (471)
Q Consensus 88 ~~~~~~v~~~p~~~~v~~G~~v~l~C~-~-~~p~~~v~W~~~~~~~~~~~~----~--~~~~L~i~~v-----~~~D~G~ 154 (471)
......+..+|.++.+.+|+.++|.|. . +.|.+.+.|+|+ +..+.... . .++.|.|.++ +.+|+|.
T Consensus 18 ~~~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~-g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~ 96 (403)
T 3laf_A 18 GRRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKD-GLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGL 96 (403)
T ss_dssp -CCSSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEET-TEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEE
T ss_pred CceeEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEEC-CEECccCCcccEEEecCCcEEEeeeeccCCCCCcceE
Confidence 356677888899999999999999999 4 468889999999 65554221 1 5667888888 6789999
Q ss_pred EEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC--CCceEE
Q psy17058 155 YICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG--PDVEVY 232 (471)
Q Consensus 155 Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~--~~~~~~ 232 (471)
|+|.+.+..+. ...+..+.+.+..+|.+.. ......+.+|+.++|.|.+ .+.|.+.+.|++++..+... ......
T Consensus 97 Y~C~~~~~~~~-~~~s~~~~l~v~~p~~~~~-~~~~~~~~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~ 173 (403)
T 3laf_A 97 YQCEASLGDSG-SIISRTAKVMVAGPLRFLS-QTESITAFMGDTVLLKCEV-IGDPMPTIHWQKNQQDLNPIPGDSRVVV 173 (403)
T ss_dssp EEEEEECGGGC-EEECCCEEEEECCCCEECS-CCCCEEEETTSCEEECCCE-ECSSCCEEEEEESSSBCCCCTTCCSEEE
T ss_pred EEEEEEeCCCc-cEEEEEEEEEecCCCcccc-CCCcEEEEcCCeEEEEEEE-cccCCCeEEEEECCEeccccCCceEEEE
Confidence 99999965433 2223334444445555443 3446678899999999998 67888999999998875321 122222
Q ss_pred eeeceEEEeccCCCCCeEEEEEEEcCCCc-eEEEEEEEEEeCCce-----eeCCCccEEecCCCcEEEEEEEeecCCCeE
Q psy17058 233 QELGVLRFNNIATGDEGKYTCIAENSAGK-EVMNAYIHVLTLPAV-----TITPSEYVSVRPGEPLTLECEATGRPMPTV 306 (471)
Q Consensus 233 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~~p~~-----~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i 306 (471)
...+.|.|.+++.+|+|.|+|.+.|..+. ....+.+.|...|.+ .........+.+|+.+.|.|.+.+.|.+.+
T Consensus 174 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~ 253 (403)
T 3laf_A 174 LPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSF 253 (403)
T ss_dssp CTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEE
T ss_pred cCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeE
Confidence 33668999999999999999999997765 345577777766542 122334567889999999999999999999
Q ss_pred EEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcc
Q psy17058 307 SWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEY 386 (471)
Q Consensus 307 ~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w 386 (471)
.|++++..+..............|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 254 ~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~--------------------- 312 (403)
T 3laf_A 254 TWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVP--------------------- 312 (403)
T ss_dssp EEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE---------------------
T ss_pred EEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECC---------------------
Confidence 99999988764433233344578999999999999999999999999999999999764
Q ss_pred cCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEE---ecCe
Q psy17058 387 YRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVE---YNGE 463 (471)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~---~~~~ 463 (471)
|.+...+....+.+|+.+.|.|.+.|.|.+.++|+|||..+..+..+ .+++
T Consensus 313 --------------------------p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~ 366 (403)
T 3laf_A 313 --------------------------PWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSN 366 (403)
T ss_dssp --------------------------EEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTE
T ss_pred --------------------------CcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCcc
Confidence 68888888888999999999999999999999999999988655432 4678
Q ss_pred EEECCCC
Q psy17058 464 LRLGPHK 470 (471)
Q Consensus 464 l~i~~~~ 470 (471)
|.|.+++
T Consensus 367 L~i~~v~ 373 (403)
T 3laf_A 367 LRILGVV 373 (403)
T ss_dssp EEESSCC
T ss_pred EEEeccc
Confidence 9988765
No 9
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=2.3e-39 Score=331.77 Aligned_cols=410 Identities=19% Similarity=0.252 Sum_probs=289.3
Q ss_pred eeccceEEEEecCcEEEEEEee-eCCccEEEeccchhh-------------------------------h----------
Q psy17058 41 SAENHEVTVYEGGDAELKCNTY-YAPGRWMWLNFYSFL-------------------------------S---------- 78 (471)
Q Consensus 41 ~~~~~~~~v~~g~~~~l~C~~~-~~~~~~~w~~~~~~~-------------------------------~---------- 78 (471)
...+.++.+.+|+.++|.|... .+...+.|++..... .
T Consensus 3 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~~~~sL~I~~v~~~D 82 (642)
T 1e07_A 3 TIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQND 82 (642)
T ss_pred eEeccCCcccccccEEEEEccCCCCceEEEEECCcccCCcceEEEEEccccccccCccccCceeeccCCcEEECCCCccc
Confidence 4456778999999999999965 344578998732110 0
Q ss_pred -heeeeeeeec----------------CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc---
Q psy17058 79 -LIIICLAYLS----------------PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI--- 137 (471)
Q Consensus 79 -~~~~c~~~~~----------------~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~--- 137 (471)
..|.|.+... ..+|.+...+ ...+.+|+.+.|.|. .+ |.+.+.|+++ +..+.....
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~g~~v~l~C~~~~-p~~~v~W~~~-g~~l~~~~~~~~ 159 (642)
T 1e07_A 83 TGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNN-SKPVEDKDAVAFTCEPET-QDATYLWWVN-NQSLPVSPRLQL 159 (642)
T ss_pred CcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEccC-ceeEecCCcEEEEEECCC-CCeeEEEEEC-CeECCCCCceEE
Confidence 1256765421 2244444432 456889999999999 55 8899999999 555543221
Q ss_pred --cCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEE
Q psy17058 138 --AGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQT 215 (471)
Q Consensus 138 --~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~ 215 (471)
.+..|.|.+++.+|+|.|+|.+.|..+...+..+.|.|... ++...+.+ ....+.+|+.++|.|.+ .+.|.+.++
T Consensus 160 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~-p~~~~~~~-~~~~~~~G~~~~l~C~~-~g~p~~~i~ 236 (642)
T 1e07_A 160 SNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYG-PDAPTISP-LNTSYRSGENLNLSCHA-ASNPPAQYS 236 (642)
T ss_pred cCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeC-CCCcEEec-CCcccccCCEEEEEEEc-CCCCCcEEE
Confidence 46799999999999999999999987763344455555521 22223333 34467899999999999 889999999
Q ss_pred EEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceE--EEEEEEEEeCC-ceeeCCCccEEecCCCcE
Q psy17058 216 WIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEV--MNAYIHVLTLP-AVTITPSEYVSVRPGEPL 292 (471)
Q Consensus 216 W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~l~V~~~p-~~~~~~~~~~~~~~g~~v 292 (471)
|++++..+. ....|.|.+++.+|+|.|+|.+.|..+... ..+.|.|..++ ...+.......+..|+.+
T Consensus 237 W~~~g~~i~---------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~~~~g~~v 307 (642)
T 1e07_A 237 WFVNGTFQQ---------STQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAV 307 (642)
T ss_pred EEECCeEcc---------cCCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEcCCceeEecCCcE
Confidence 999987642 245799999999999999999999887654 34566665532 222222233456668889
Q ss_pred EEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCce-EEEEEEEEecCCCCCCC
Q psy17058 293 TLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE-EKVITVAVEHRPEYGPI 371 (471)
Q Consensus 293 ~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~ 371 (471)
.|.|.+.+.| +.+.|++++..+..............|.|.++..+|+|.|+|.|.|..|.. +..+.|.|...|.....
T Consensus 308 ~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~ 386 (642)
T 1e07_A 308 ALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTI 386 (642)
T ss_pred EEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCee
Confidence 9999999876 699999999887644332333456789999999999999999999999875 45688888877644322
Q ss_pred CCCCCCccccCCC----------------cc---cCCCC-CCCceEEEcCCcce--EEe------------------ee-
Q psy17058 372 SPRPGADILPDGD----------------EY---YRPEP-EEGEYVYAVGSNAS--ISC------------------SV- 410 (471)
Q Consensus 372 ~~~~~~~~~~~~~----------------~w---~~~~~-~~~~~~~~~~~~~~--y~c------------------~~- 410 (471)
.+. ......|+ +| +.++. ...+.|.++..+|+ |+| +.
T Consensus 387 ~~~--~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~ 464 (642)
T 1e07_A 387 SPS--YTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSA 464 (642)
T ss_pred cCC--ceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEec
Confidence 221 11112222 77 33333 33458889998888 999 11
Q ss_pred --cCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEE----ecCeEEECCCC
Q psy17058 411 --EPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVE----YNGELRLGPHK 470 (471)
Q Consensus 411 --~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~----~~~~l~i~~~~ 470 (471)
.+|.+.. +....+.+|+.+.|.|.+.+ |.+.++|+|||.+|..+.++ .+++|.|.+++
T Consensus 465 ~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~ 528 (642)
T 1e07_A 465 ELPKPSISS-NNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVT 528 (642)
T ss_pred cCCCceEec-CCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecC
Confidence 2444443 33467889999999999994 88999999999999776544 35688888765
No 10
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=323.67 Aligned_cols=369 Identities=15% Similarity=0.218 Sum_probs=256.6
Q ss_pred eeccceEEEEecCcEEEEEEeee-CCccEEEeccch--h-----------------------------h---------hh
Q psy17058 41 SAENHEVTVYEGGDAELKCNTYY-APGRWMWLNFYS--F-----------------------------L---------SL 79 (471)
Q Consensus 41 ~~~~~~~~v~~g~~~~l~C~~~~-~~~~~~w~~~~~--~-----------------------------~---------~~ 79 (471)
...++.+.+.+|+.++|.|.+.. +...+.|++... . | ..
T Consensus 4 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 83 (523)
T 2rcj_C 4 LTQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDES 83 (523)
T ss_pred cccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCE
Confidence 44567899999999999999974 556889976420 0 0 01
Q ss_pred eeeeeeeec-------------------CCCCcEEEcCCceeecCCCcEEEEee-CCCCC--CeEEEEeCCCCCCCCCcc
Q psy17058 80 IIICLAYLS-------------------PQANEVQVTPRQQSAPEGSQVTIECK-SNDPS--ATIKWSKDNQEQLPPNMI 137 (471)
Q Consensus 80 ~~~c~~~~~-------------------~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~--~~v~W~~~~~~~~~~~~~ 137 (471)
.|.|.+... ..+|.+.+.|....+.+|+.+.|.|. .+.+. +.+.|+++ +..+.....
T Consensus 84 ~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~-g~~l~~~~~ 162 (523)
T 2rcj_C 84 DYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKAD-GSPVKAGVE 162 (523)
T ss_pred EEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecC-CCCCCCceE
Confidence 367887631 23456666676667788999999999 66554 39999998 555543211
Q ss_pred -------c------CcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEE--eeccCCeeeecCCCceeEEcCCeEEEE
Q psy17058 138 -------A------GETLIINGITKADEGVYICSIQNAQGNVFQDYASIQV--DKREMPRIRIHPNASQTFIVGDRADIQ 202 (471)
Q Consensus 138 -------~------~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v--~~~~~p~~~~~~~~~~~v~~g~~~~L~ 202 (471)
. ...|.|.+++.+|+|.|+|.|.|..+. ......+.+ ....+|.+....+ ...+.+|+.++|.
T Consensus 163 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~-~~~~~~~~~~~~~~~~P~v~~~~~-~~~~~~G~~~~l~ 240 (523)
T 2rcj_C 163 TTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST-VEKTVAPTECSASTKGPSVFPLAP-SSKSTSGGTAALG 240 (523)
T ss_pred eccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcc-cccceeeeecCCCCcCCEEEecCC-CcccccCCceEEE
Confidence 1 136999999999999999999998765 333333221 2234455543332 2346789999999
Q ss_pred EEccCCCCCC-eEEEEeCCCCCCcCCCceE------EeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCc
Q psy17058 203 CVLEAGEPSP-TQTWIRPDNDGKFGPDVEV------YQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPA 275 (471)
Q Consensus 203 C~~~~~~p~~-~v~W~~~~~~~~~~~~~~~------~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~ 275 (471)
|.+....|.+ .++|++++..+........ ....+.|.|.++..+| |.|+|.|.|..+.......|.+...|.
T Consensus 241 C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~ 319 (523)
T 2rcj_C 241 CLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPS 319 (523)
T ss_pred EEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCce
Confidence 9994444766 8999999876432111111 1113479999999999 999999999998877777777766677
Q ss_pred eeeCCCccEE-ecCCCcEEEEEEEeecCC----CeEEEEeCCccCCCccccc-------ccCceeEEEEeecCCCCCeEE
Q psy17058 276 VTITPSEYVS-VRPGEPLTLECEATGRPM----PTVSWVKYIAPFDRNLERD-------ELTSRAVYTIASVRESDAGQY 343 (471)
Q Consensus 276 ~~~~~~~~~~-~~~g~~v~l~C~~~g~p~----~~i~W~~~~~~~~~~~~~~-------~~~~~~~l~i~~~~~~d~G~Y 343 (471)
+.+.++.... +.+|+.+.|.|.+.|.|+ +.+.|+|++..+....... .....+.|.|..+..+|+|.|
T Consensus 320 ~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y 399 (523)
T 2rcj_C 320 VFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEY 399 (523)
T ss_pred EEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeE
Confidence 6555443333 788999999999998653 4899999998875432110 112335688999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeee
Q psy17058 344 KCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQT 423 (471)
Q Consensus 344 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~ 423 (471)
+|.|.|..+.......|.+.... ..+|.+...+....
T Consensus 400 ~C~a~n~~~~~~~~~~~~~~~~~-------------------------------------------~~~P~v~~~~~~~~ 436 (523)
T 2rcj_C 400 KCKVSNKALPAPIEKTISKAKGQ-------------------------------------------PREPQVYTLPPSRE 436 (523)
T ss_pred EEEEeCCCCCCceeEEEEcccCC-------------------------------------------CCCCEEEEeCCChH
Confidence 99999998877555555432110 12577766544432
Q ss_pred eeCCCeEEEEEEecccCCc--eEEEecCCCCCCCc
Q psy17058 424 VKPGDIANIRCSAIGATPI--SIRWQPLQGYFPSH 456 (471)
Q Consensus 424 ~~~g~~~~l~C~~~g~p~~--~v~W~~~g~~l~~~ 456 (471)
...|..+.|.|.+.|.|++ .|+|+|||++|...
T Consensus 437 ~~~~~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 471 (523)
T 2rcj_C 437 EMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNY 471 (523)
T ss_pred HccCCceEEEEEEEeeECCCCEEEEEECCEECCCe
Confidence 2334459999999998776 99999999998754
No 11
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=3.2e-40 Score=318.87 Aligned_cols=332 Identities=22% Similarity=0.356 Sum_probs=253.6
Q ss_pred cCCCCcEEEc-CCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCC----cc---cCcEEEEc----CCCCCCCeE
Q psy17058 88 SPQANEVQVT-PRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPN----MI---AGETLIIN----GITKADEGV 154 (471)
Q Consensus 88 ~~~~~~v~~~-p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~----~~---~~~~L~i~----~v~~~D~G~ 154 (471)
...+|.+... +....+.+|+++.|.|. .+.|.+.+.|+|+ +..+... .. .++.|.|. +++.+|+|.
T Consensus 13 ~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~ 91 (404)
T 3p3y_A 13 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRN-SRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 91 (404)
T ss_dssp CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEET-TEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEE
T ss_pred ccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEEC-CEEeeeecCCcceEecCCceEEEEeccCCCCccCCEE
Confidence 3467888764 66788999999999999 8889999999999 5444311 11 45567665 889999999
Q ss_pred EEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEee
Q psy17058 155 YICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQE 234 (471)
Q Consensus 155 Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~ 234 (471)
|+|.+.|..+...+....|.| ..+|...........+.+|+.++|.|.+..+.|.+.+.|++++..............
T Consensus 92 Y~C~a~n~~g~~~s~~~~l~V--~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~ 169 (404)
T 3p3y_A 92 YQCFARNKFGTALSNRIRLQV--SKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGH 169 (404)
T ss_dssp EEEEEECSSCEEEEEEEEEEE--CCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECT
T ss_pred EEEEEEcCCCeEeeeeEEEEE--eccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcC
Confidence 999999987763334444444 455554444444567889999999999867788899999998765333222222333
Q ss_pred eceEEEeccCCCC-CeEEEEEEEcCCCceE---EEEEEEEEeC-------CceeeCC--CccEEecCCCcEEEEEEEeec
Q psy17058 235 LGVLRFNNIATGD-EGKYTCIAENSAGKEV---MNAYIHVLTL-------PAVTITP--SEYVSVRPGEPLTLECEATGR 301 (471)
Q Consensus 235 ~~~l~i~~~~~~d-~G~Y~C~~~~~~~~~~---~~~~l~V~~~-------p~~~~~~--~~~~~~~~g~~v~l~C~~~g~ 301 (471)
++.|.|.++...| +|.|+|.+.|..+... ..+.+.+... |.+.... .....+.+|+.+.|.|.+.|+
T Consensus 170 ~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~ 249 (404)
T 3p3y_A 170 NGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGV 249 (404)
T ss_dssp TSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCS
T ss_pred CCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCC
Confidence 6789999999999 5999999999877532 2245666532 2222111 123468899999999999999
Q ss_pred CCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCcccc
Q psy17058 302 PMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILP 381 (471)
Q Consensus 302 p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~ 381 (471)
|.+.+.|++++..+..... ........|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 250 p~~~v~W~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~---------------- 312 (404)
T 3p3y_A 250 PTPDIAWYKKGGDLPSDKA-KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAA---------------- 312 (404)
T ss_dssp SCCEEEEEETTBCCCTTTE-EEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE----------------
T ss_pred CCCcEEEEECCEECCCCcc-cccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCC----------------
Confidence 9999999999988764432 22334578999999999999999999999999999999999874
Q ss_pred CCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCce----
Q psy17058 382 DGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHV---- 457 (471)
Q Consensus 382 ~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~---- 457 (471)
|.+...+....+.+|+.+.|.|.+.|+|++.++|+|||..+..+.
T Consensus 313 -------------------------------p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~ 361 (404)
T 3p3y_A 313 -------------------------------PYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPN 361 (404)
T ss_dssp -------------------------------EEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTT
T ss_pred -------------------------------CeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCce
Confidence 688888888899999999999999999999999999999986543
Q ss_pred -EEecCeEEECCCC
Q psy17058 458 -VEYNGELRLGPHK 470 (471)
Q Consensus 458 -~~~~~~l~i~~~~ 470 (471)
...+++|.|.+++
T Consensus 362 ~~~~~~~L~i~~v~ 375 (404)
T 3p3y_A 362 REVAGDTIIFRDTQ 375 (404)
T ss_dssp EEEETTEEEESSCC
T ss_pred EEecCCEEEEeecC
Confidence 3367789998875
No 12
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=4.1e-40 Score=346.47 Aligned_cols=397 Identities=22% Similarity=0.318 Sum_probs=298.1
Q ss_pred ccCcCCCCCeeeecccccccccccccccceeeeccceEEEEecCcEEEEEEeeeCC----ccEEEeccchhh--------
Q psy17058 10 KPTSSNQGNALTTTPSRQETNAFAGEVTQFVSAENHEVTVYEGGDAELKCNTYYAP----GRWMWLNFYSFL-------- 77 (471)
Q Consensus 10 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~~~----~~~~w~~~~~~~-------- 77 (471)
+.|.+.+.|..++..|+...+.+ ...+++......+.+.+|+.++|.|..+... ..+.|++....+
T Consensus 113 G~Y~C~a~n~~G~~~S~~~~v~~--~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~ 190 (816)
T 3dmk_A 113 QVYACLARNQFGSIISRDVHVRA--VVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYD 190 (816)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE--ECCCCCCCBCCCEEEETTSCEEECCBCCHHHHTTEEEEEEEETTSCEECBSSCBT
T ss_pred eEEEEEEecCcceEEccceEEEE--EEccccEEEEecceEecCceEEEEECCCccccccEEEEEEEecCceEeccccCCC
Confidence 56777888888888788777664 2344445566778999999999999987322 578898643211
Q ss_pred --------------------h-heeeeeeeecC---------------------CCCcEEEcC--CceeecCCCcEEEEe
Q psy17058 78 --------------------S-LIIICLAYLSP---------------------QANEVQVTP--RQQSAPEGSQVTIEC 113 (471)
Q Consensus 78 --------------------~-~~~~c~~~~~~---------------------~~~~v~~~p--~~~~v~~G~~v~l~C 113 (471)
. ..|.|.+.... .+|.+...+ ....+.+|+++.|.|
T Consensus 191 ~r~~~~~~g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~~~~~P~i~~~~~~~~~~v~~g~~v~L~C 270 (816)
T 3dmk_A 191 GKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLC 270 (816)
T ss_dssp TTEEECTTSCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCCSCCCCBCCGGGGEEEEEECTTSCEEECC
T ss_pred ceEEEecCceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCCCCCCCCccccccCccceEEeCCCeEEEEE
Confidence 1 34788865211 122222111 245789999999999
Q ss_pred e-CCCCCCeEEEEeCCCCCC-------CCCcc-cCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeee
Q psy17058 114 K-SNDPSATIKWSKDNQEQL-------PPNMI-AGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIR 184 (471)
Q Consensus 114 ~-~~~p~~~v~W~~~~~~~~-------~~~~~-~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~ 184 (471)
. .+.|.+.+.|+|++.... ..+.. ..++|.|.+++.+|+|.|+|.+.|..+. ......+.|. .++...
T Consensus 271 ~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~--~~~~~~ 347 (816)
T 3dmk_A 271 PAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGG-ESVETVLTVT--APLSAK 347 (816)
T ss_dssp CCBCSSCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECSSCE-EEEEEEEEEC--EEEEEE
T ss_pred EeeecCCCeEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEEcCCCc-eEEEEEEEEc--CCCcee
Confidence 9 888999999999632211 11111 4679999999999999999999998876 5555555554 444444
Q ss_pred ecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEE
Q psy17058 185 IHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVM 264 (471)
Q Consensus 185 ~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 264 (471)
..+. ...+.+|+.++|.|.+ .+.|.+.++|++++..+.. ..+.|.|.+++.+|+|.|+|.+.|..+....
T Consensus 348 ~~~~-~~~v~~G~~v~l~C~~-~g~p~~~v~W~k~g~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 417 (816)
T 3dmk_A 348 IDPP-TQTVDFGRPAVFTCQY-TGNPIKTVSWMKDGKAIGH--------SESVLRIESVKKEDKGMYQCFVRNDRESAEA 417 (816)
T ss_dssp EESS-EEECCTTSCEEEEEEE-EEECCCEEEEEETTEECSC--------CSSEEEESSCCGGGCEEEEEEEECSSCEEEE
T ss_pred eCCC-ceEecCCCCEEEEEEE-eccCCCEEEEEECCEECCC--------CCCEEEEcCCCHHHCEEEEEEEECCCCcEEE
Confidence 4443 4567899999999999 7788999999999876432 2467999999999999999999999888777
Q ss_pred EEEEEEE---eCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccc-------cccCceeEEEEee
Q psy17058 265 NAYIHVL---TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLER-------DELTSRAVYTIAS 334 (471)
Q Consensus 265 ~~~l~V~---~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~-------~~~~~~~~l~i~~ 334 (471)
++.|.|. .+|.+...+ ....+.+|+.+.|.|.+.|+|.+.+.|++++..+...... ........|.|.+
T Consensus 418 ~~~l~v~~~~~~p~i~~~~-~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~ 496 (816)
T 3dmk_A 418 SAELKLGGRFDPPVIRQAF-QEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITS 496 (816)
T ss_dssp CCEEECCCSSCCCEEEEEC-CCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESS
T ss_pred EEEEEEccccCCCceEecC-cceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEee
Confidence 7777774 355555443 3457889999999999999999999999999887643221 1122345799999
Q ss_pred cCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCe
Q psy17058 335 VRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPR 414 (471)
Q Consensus 335 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~ 414 (471)
++.+|+|.|+|.|.|..|....++.|.|..+ |.
T Consensus 497 v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-----------------------------------------------p~ 529 (816)
T 3dmk_A 497 VHANDGGLYKCIAKSKVGVAEHSAKLNVYGL-----------------------------------------------PY 529 (816)
T ss_dssp CCTTTCEEEEEEEEETTEEEEEEEEEEECSS-----------------------------------------------CE
T ss_pred ccccCCEEEEEEEEECCCeEEEEEEEEEecC-----------------------------------------------Ce
Confidence 9999999999999999999999999999875 43
Q ss_pred eEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEE---ecCeEEECCCC
Q psy17058 415 ITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVE---YNGELRLGPHK 470 (471)
Q Consensus 415 ~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~---~~~~l~i~~~~ 470 (471)
+. .+....+.+|+.+.|.|.+.|.|.+.++|+|||..+..+.+. .+++|.|.+++
T Consensus 530 ~~-~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~ 587 (816)
T 3dmk_A 530 IR-QMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVE 587 (816)
T ss_dssp EC-CCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCC
T ss_pred eE-ccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEEecC
Confidence 33 334567889999999999999999999999999988655432 57889998874
No 13
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=4.7e-40 Score=316.74 Aligned_cols=329 Identities=21% Similarity=0.284 Sum_probs=249.9
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CC-CCCCeEEEEeCCCCCCCCCc------ccCcEEEEcCCCCCCCeEEEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SN-DPSATIKWSKDNQEQLPPNM------IAGETLIINGITKADEGVYICSIQ 160 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~-~p~~~v~W~~~~~~~~~~~~------~~~~~L~i~~v~~~D~G~Y~C~~~ 160 (471)
..+|.|...|.++.+.+|+++.|.|. .+ .|.+.+.|+|+ +..+.... ...++|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (395)
T 1bih_A 4 DKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKD-GKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAE 82 (395)
T ss_dssp -CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEES-SSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEE
T ss_pred CCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEEC-CcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEE
Confidence 46889999999999999999999999 55 78899999999 55554332 156789999999999999999999
Q ss_pred ecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCC-Cc------CCCceEEe
Q psy17058 161 NAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDG-KF------GPDVEVYQ 233 (471)
Q Consensus 161 ~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~-~~------~~~~~~~~ 233 (471)
|..+...+....+.|.....|.+.. ....+.+|+.++|.|.+..+.|.+.+.|++++... +. ..++....
T Consensus 83 n~~g~~~s~~~~l~v~~~~~p~~~~---~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~ 159 (395)
T 1bih_A 83 TPAGVASSRVISFRKTYLIASPAKT---HEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGP 159 (395)
T ss_dssp ETTEEEECCCEEEEEEEEECCCCEE---EEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECT
T ss_pred eCCCeEEeEEEEEEEEEeecCCcCC---cceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcC
Confidence 9876533334556655433444321 23456799999999996567888999999987221 11 22333333
Q ss_pred eeceEEEeccCCCCCe---EEEEEEEcCCCceEEEEEEEEE---eCC--------ceeeCCCccEEecCCCcEEEEEEEe
Q psy17058 234 ELGVLRFNNIATGDEG---KYTCIAENSAGKEVMNAYIHVL---TLP--------AVTITPSEYVSVRPGEPLTLECEAT 299 (471)
Q Consensus 234 ~~~~l~i~~~~~~d~G---~Y~C~~~~~~~~~~~~~~l~V~---~~p--------~~~~~~~~~~~~~~g~~v~l~C~~~ 299 (471)
++.|.|.+++.+|.| .|+|.+.|..+........... ..+ ..... .....+.+|+.+.|.|.+.
T Consensus 160 -~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~G~~v~l~C~~~ 237 (395)
T 1bih_A 160 -DGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYV-SKDMMAKAGDVTMIYCMYG 237 (395)
T ss_dssp -TSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEE-CCSEEEETTSCEEEEEEEE
T ss_pred -CCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceec-CCceEEECCCcEEEEEEec
Confidence 568999999999999 9999999988775433322221 110 11111 2346788999999999999
Q ss_pred ecCCCeEEEEeCCccCCCccc----ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEE-EEEEEEecCCCCCCCCCC
Q psy17058 300 GRPMPTVSWVKYIAPFDRNLE----RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEK-VITVAVEHRPEYGPISPR 374 (471)
Q Consensus 300 g~p~~~i~W~~~~~~~~~~~~----~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~~~~~~~~ 374 (471)
|+|.+.+.|++++..+..... .........|.|.++..+|+|.|+|.|.|..|.... .+.|.|..+
T Consensus 238 g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~--------- 308 (395)
T 1bih_A 238 SNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSA--------- 308 (395)
T ss_dssp CSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEE---------
T ss_pred cCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcC---------
Confidence 999999999999988753211 111223458999999999999999999999998765 889998864
Q ss_pred CCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCe-eeeeCCCeEEEEEEecccCCceEEEecCCCCC
Q psy17058 375 PGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVR-QTVKPGDIANIRCSAIGATPISIRWQPLQGYF 453 (471)
Q Consensus 375 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l 453 (471)
|.|...+.. ..+.+|+.+.|.|.+.|.|.|.++|+|||.+|
T Consensus 309 --------------------------------------P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~ 350 (395)
T 1bih_A 309 --------------------------------------PKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPL 350 (395)
T ss_dssp --------------------------------------EEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEEC
T ss_pred --------------------------------------CccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEEC
Confidence 788877776 78999999999999999999999999999998
Q ss_pred CCc-eEEecCeEEECCCC
Q psy17058 454 PSH-VVEYNGELRLGPHK 470 (471)
Q Consensus 454 ~~~-~~~~~~~l~i~~~~ 470 (471)
..+ ....+++|.|.+++
T Consensus 351 ~~~~~~~~~~~L~i~~~~ 368 (395)
T 1bih_A 351 SGGRATVTDSGLVIKGVK 368 (395)
T ss_dssp CSSSEEEETTEEEESSCC
T ss_pred CCCceEEECCEEEEeeCC
Confidence 754 33467799998875
No 14
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=1.5e-39 Score=312.47 Aligned_cols=325 Identities=19% Similarity=0.320 Sum_probs=244.1
Q ss_pred CCCcEEEcCCc-eeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCc-----ccCcEEEEcCCCCCC------CeEEE
Q psy17058 90 QANEVQVTPRQ-QSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNM-----IAGETLIINGITKAD------EGVYI 156 (471)
Q Consensus 90 ~~~~v~~~p~~-~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~-----~~~~~L~i~~v~~~D------~G~Y~ 156 (471)
.+|.|...|.+ +.+.+|+.++|.|. .+.|.+.+.|+++++..+.... ..+++|.|.+++.+| +|.|+
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~ 81 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYA 81 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEE
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEE
Confidence 36788888775 55889999999999 7889999999995476665321 156789999999997 99999
Q ss_pred EEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCC---CCeEEEEeCCCCCCc-----CCC
Q psy17058 157 CSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEP---SPTQTWIRPDNDGKF-----GPD 228 (471)
Q Consensus 157 C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p---~~~v~W~~~~~~~~~-----~~~ 228 (471)
|.+.|..+...+....+.+. .+|.+...+ ....+.+|+.++|.|.+ .+.+ .+.+.|++++..+.. ..+
T Consensus 82 C~a~n~~g~~~s~~~~v~v~--~~p~~~~~~-~~~~v~~G~~v~l~C~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~ 157 (388)
T 2v5m_A 82 CLARNQFGSIISRDVHVRAV--VAQYYEADV-NKEHVIRGNSAVIKCLI-PSFVADFVEVVSWHTDEEENYFPGAEYDGK 157 (388)
T ss_dssp EEEEETTEEEECCCEEEEEE--CCCCCCCBC-CCEEEETTSCEEECCBC-CTTTTTTEEEEEEEETTCCEECSSSCBTTT
T ss_pred EEEEccCCeEEecceEEEEc--cccccccCc-cceeeecCCcEEEEEEC-cCCCCCCcceEEEEeCCCcccccccCCCCc
Confidence 99999877533334444443 445444333 34578899999999999 4443 378999999876432 223
Q ss_pred ceEEeeeceEEEeccCCCCC-eEEEEEEEcCCCceE-EE---EEEEEEeCC-----ceeeCCCccEEecCCCcEEEEEEE
Q psy17058 229 VEVYQELGVLRFNNIATGDE-GKYTCIAENSAGKEV-MN---AYIHVLTLP-----AVTITPSEYVSVRPGEPLTLECEA 298 (471)
Q Consensus 229 ~~~~~~~~~l~i~~~~~~d~-G~Y~C~~~~~~~~~~-~~---~~l~V~~~p-----~~~~~~~~~~~~~~g~~v~l~C~~ 298 (471)
..+. ..+.|.|.+++.+|+ |.|+|.+.|..+... .+ ..|.|..+. .+.........+.+|+.+.|.|.+
T Consensus 158 ~~~~-~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~ 236 (388)
T 2v5m_A 158 YLVL-PSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPA 236 (388)
T ss_dssp EEEC-TTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCC
T ss_pred EEEc-cCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEEC
Confidence 3333 256899999999999 999999999754322 21 345665432 111111223467899999999999
Q ss_pred eecCCCeEEEEeCCccCCCcc----cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCC
Q psy17058 299 TGRPMPTVSWVKYIAPFDRNL----ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPR 374 (471)
Q Consensus 299 ~g~p~~~i~W~~~~~~~~~~~----~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~ 374 (471)
.|+|.+.+.|++++..+.... ........+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 237 ~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~--------- 307 (388)
T 2v5m_A 237 QGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP--------- 307 (388)
T ss_dssp EEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE---------
T ss_pred CCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCC---------
Confidence 999999999999865543111 1011223568999999999999999999999999999999999864
Q ss_pred CCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCC
Q psy17058 375 PGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFP 454 (471)
Q Consensus 375 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~ 454 (471)
|.+...+....+.+|+.+.|.|.+.|+|++.|+|+|||..|.
T Consensus 308 --------------------------------------p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~ 349 (388)
T 2v5m_A 308 --------------------------------------LSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIG 349 (388)
T ss_dssp --------------------------------------EEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECS
T ss_pred --------------------------------------CccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECc
Confidence 677777878899999999999999999999999999999986
Q ss_pred CceEEecCeEEECCCC
Q psy17058 455 SHVVEYNGELRLGPHK 470 (471)
Q Consensus 455 ~~~~~~~~~l~i~~~~ 470 (471)
.+ +++|.|.+++
T Consensus 350 ~~----~~~L~i~~v~ 361 (388)
T 2v5m_A 350 HS----ESVLRIESVK 361 (388)
T ss_dssp CC----SSEEEESSCC
T ss_pred cC----CCEEEEecCC
Confidence 53 5678887764
No 15
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=322.49 Aligned_cols=343 Identities=15% Similarity=0.157 Sum_probs=240.1
Q ss_pred ceEEEEecCcEEEEEEeeeCC-ccEEEeccchhh--------------h-----------heeeeeeeecCCC----CcE
Q psy17058 45 HEVTVYEGGDAELKCNTYYAP-GRWMWLNFYSFL--------------S-----------LIIICLAYLSPQA----NEV 94 (471)
Q Consensus 45 ~~~~v~~g~~~~l~C~~~~~~-~~~~w~~~~~~~--------------~-----------~~~~c~~~~~~~~----~~v 94 (471)
..+.|.+|+.++|.|.+..++ ..+.|.++...+ + ..|.|.+...... ..+
T Consensus 56 ~~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v 135 (527)
T 3qs9_E 56 AAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTV 135 (527)
T ss_dssp CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEE
T ss_pred eeEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEE
Confidence 379999999999999998655 578887533310 0 1367777532111 111
Q ss_pred EEc-------CCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCc-c--cCcEEEEcCCCCCCCeEEEEEEEecC
Q psy17058 95 QVT-------PRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNM-I--AGETLIINGITKADEGVYICSIQNAQ 163 (471)
Q Consensus 95 ~~~-------p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~-~--~~~~L~i~~v~~~D~G~Y~C~~~~~~ 163 (471)
.+. +.......|+.+.|.|. .+.|.+.+.|+++++ ...... . .........+...|+|.|+|.|.|..
T Consensus 136 ~v~~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~ 214 (527)
T 3qs9_E 136 SIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDS-QGESCKEESPAVVKKEEKVLHELFGTDIRCCARNEL 214 (527)
T ss_dssp EEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC--------------CEEECCSEECCCCSSCEEEEEECSS
T ss_pred EECCceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCC-CCccccccCCcEEEEeeeeccccCCEEEEEEEEeCC
Confidence 111 12234566888899999 899999999999843 332111 1 11122233456889999999999988
Q ss_pred CceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceE--------Eeee
Q psy17058 164 GNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEV--------YQEL 235 (471)
Q Consensus 164 ~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~--------~~~~ 235 (471)
|..... .+.+.+...|.. ++....+.+|+.++|.|.+..+.|.+.++|++++..+........ ....
T Consensus 215 G~~~~~--~~~l~V~~~p~~---~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~ 289 (527)
T 3qs9_E 215 GRECTR--LFTIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRI 289 (527)
T ss_dssp CEEEEE--CEEEESSSCCCC---SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEE
T ss_pred Ccccce--EEEEEEeccCcc---CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeE
Confidence 873332 244444444543 344567889999999999944889999999999987554322211 1224
Q ss_pred ceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCC-ccEEecCCCcEEEEEEEeecCCCeEEEEeCCcc
Q psy17058 236 GVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPS-EYVSVRPGEPLTLECEATGRPMPTVSWVKYIAP 314 (471)
Q Consensus 236 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~-~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~ 314 (471)
..|.|.+++.+|+|.|+|.|.|. .+..+.|.|..+|.+...+. ....+.+|+.+.|.|.+.|+|.|.+.|++++..
T Consensus 290 ~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~ 366 (527)
T 3qs9_E 290 LFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKS 366 (527)
T ss_dssp EEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEE
T ss_pred EEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEE
Confidence 56999999999999999999887 67778889988887766543 235678999999999999999999999999988
Q ss_pred CCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCC
Q psy17058 315 FDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEG 394 (471)
Q Consensus 315 ~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 394 (471)
+..... .......|.|.+++.+|+|.|+|.|.|..|....++.|.|..+
T Consensus 367 l~~~~~--~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~----------------------------- 415 (527)
T 3qs9_E 367 FPCEQK--GLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRK----------------------------- 415 (527)
T ss_dssp EECBCC--BCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CC-----------------------------
T ss_pred CcCCcc--cccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecC-----------------------------
Confidence 754432 2235678999999999999999999999999999999999764
Q ss_pred ceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCC
Q psy17058 395 EYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYF 453 (471)
Q Consensus 395 ~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l 453 (471)
|.|...+. | ..|.|.+.|.|+|.|+|++++..+
T Consensus 416 ------------------P~i~~~~~------~--~~l~C~a~g~P~p~i~W~~~~~~~ 448 (527)
T 3qs9_E 416 ------------------PQVLAEAS------A--SQASCFSDGYPLPSWTWKKCSDKS 448 (527)
T ss_dssp ------------------CEEEECCC------C--E---EEEECSSCCEEEEECCC---
T ss_pred ------------------CeEEEeCC------C--CEEEEEEEEEcCCeEEEEECCCCc
Confidence 67765542 2 358999999999999999986544
No 16
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-38 Score=305.62 Aligned_cols=326 Identities=23% Similarity=0.368 Sum_probs=255.0
Q ss_pred ccceeeeccceEEEEecCcEEEEEEeee--CCccEEEeccchhh------------------------------hheeee
Q psy17058 36 VTQFVSAENHEVTVYEGGDAELKCNTYY--APGRWMWLNFYSFL------------------------------SLIIIC 83 (471)
Q Consensus 36 ~~~~~~~~~~~~~v~~g~~~~l~C~~~~--~~~~~~w~~~~~~~------------------------------~~~~~c 83 (471)
....+...++++.+.+|+.++|.|.+.. +...+.|++++..+ ...|.|
T Consensus 20 ~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C 99 (403)
T 3laf_A 20 RSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQC 99 (403)
T ss_dssp CSSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEE
T ss_pred eeEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEEE
Confidence 3456677889999999999999999985 45579999755322 123688
Q ss_pred eeee--------------cCCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCC---cc----cCcE
Q psy17058 84 LAYL--------------SPQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPN---MI----AGET 141 (471)
Q Consensus 84 ~~~~--------------~~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~---~~----~~~~ 141 (471)
.+.. ...++.+...+....+.+|+++.|.|. .+.|.+.+.|+++ +..+... .. ..+.
T Consensus 100 ~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~ 178 (403)
T 3laf_A 100 EASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKN-QQDLNPIPGDSRVVVLPSGA 178 (403)
T ss_dssp EEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEES-SSBCCCCTTCCSEEECTTSC
T ss_pred EEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEEC-CEeccccCCceEEEEcCCce
Confidence 8752 123455555667788999999999999 7888899999999 5444211 11 4678
Q ss_pred EEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccC---CeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEe
Q psy17058 142 LIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKREM---PRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIR 218 (471)
Q Consensus 142 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~---p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~ 218 (471)
|.|.+++.+|+|.|+|.+.|..+........+.|..... +...........+.+|+.++|.|.+ .+.|.+.+.|++
T Consensus 179 L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~~~~~W~~ 257 (403)
T 3laf_A 179 LQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCV-SGYPPPSFTWLR 257 (403)
T ss_dssp EEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEE-EEESCCEEEEEE
T ss_pred EEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEc-CCCCCCeEEEEE
Confidence 999999999999999999997765344455566553221 1122333445678899999999999 678888999999
Q ss_pred CCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEE
Q psy17058 219 PDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEA 298 (471)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~ 298 (471)
++..+...........++.|.|.+++.+|+|.|+|.+.|..+..+..+.|.|..+|.+...+. ...+.+|+.+.|.|.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~-~~~~~~g~~v~l~C~~ 336 (403)
T 3laf_A 258 GEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPS-NLYAYESMDIEFECAV 336 (403)
T ss_dssp TTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCC-CEECCTTCCEEECCEE
T ss_pred CCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCc-ceEEecCCeEEEEEEE
Confidence 988765544444444467899999999999999999999999889999999999888876653 5678899999999999
Q ss_pred eecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecC
Q psy17058 299 TGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 299 ~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 365 (471)
.|.|.+.+.|++++..+..... ......+.|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 337 ~g~p~p~v~W~~~g~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P 402 (403)
T 3laf_A 337 SGKPVPTVNWMKNGDVVIPSDY-FQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKP 402 (403)
T ss_dssp EEESCCEEEEEETTEECCCSSS-EEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred eeccCCEEEEEECCEECCCCCc-EEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCC
Confidence 9999999999999988754322 12234568999999999999999999999999999999999875
No 17
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=1.2e-37 Score=315.66 Aligned_cols=372 Identities=15% Similarity=0.176 Sum_probs=266.9
Q ss_pred eeccceEEEEecCcEEEEEEeeeCCc----cEEEeccchhh-------------------------------h-------
Q psy17058 41 SAENHEVTVYEGGDAELKCNTYYAPG----RWMWLNFYSFL-------------------------------S------- 78 (471)
Q Consensus 41 ~~~~~~~~v~~g~~~~l~C~~~~~~~----~~~w~~~~~~~-------------------------------~------- 78 (471)
...++.+.+.+|+.++|.|.+...+. .+.|++....+ .
T Consensus 4 i~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~ 83 (585)
T 2ocw_A 4 IFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLS 83 (585)
T ss_pred ccCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCC
Confidence 45577899999999999999985432 78898764210 0
Q ss_pred ----heeeeeeee------------cCCCCcEEEcCCceeecCCCcEEEEee-C-CCCCCeEEEEeCCCCCC--------
Q psy17058 79 ----LIIICLAYL------------SPQANEVQVTPRQQSAPEGSQVTIECK-S-NDPSATIKWSKDNQEQL-------- 132 (471)
Q Consensus 79 ----~~~~c~~~~------------~~~~~~v~~~p~~~~v~~G~~v~l~C~-~-~~p~~~v~W~~~~~~~~-------- 132 (471)
..|.|.+.. ...+|.+...+....+.+|+.+.|.|. . ..+.+.+.|+++++...
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~ 163 (585)
T 2ocw_A 84 QDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSG 163 (585)
T ss_pred cccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCc
Confidence 125777541 234566666778889999999999999 4 44567899999954321
Q ss_pred ------CCCcc---cC-----cEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCe
Q psy17058 133 ------PPNMI---AG-----ETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDR 198 (471)
Q Consensus 133 ------~~~~~---~~-----~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~ 198 (471)
..+.. .+ ..|.|.+++.+|+|.|+|.+.|..+. ....+.|.|.. ++ +....+.+|+.
T Consensus 164 ~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~--~~------p~~~~~~~G~~ 234 (585)
T 2ocw_A 164 YVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNS-NKKNADLQVLK--PE------PELVYEDLRGS 234 (585)
T ss_pred ccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCcc-ccceEEEEEcc--CC------CceeEEcCCCc
Confidence 11111 11 27999999999999999999988776 55566666653 22 22335678999
Q ss_pred EEEEEEccCCCCC-CeEEEE-eCCCCCC------------cCCCceEEe--eec--eEEEeccCCCCCeEEEEEEEcCCC
Q psy17058 199 ADIQCVLEAGEPS-PTQTWI-RPDNDGK------------FGPDVEVYQ--ELG--VLRFNNIATGDEGKYTCIAENSAG 260 (471)
Q Consensus 199 ~~L~C~~~~~~p~-~~v~W~-~~~~~~~------------~~~~~~~~~--~~~--~l~i~~~~~~d~G~Y~C~~~~~~~ 260 (471)
++|.|.+....|. +.+.|+ +++.... ...++.+.. ..+ .|.|.+++.+|+|.|+|.+.|...
T Consensus 235 v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~ 314 (585)
T 2ocw_A 235 VTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQ 314 (585)
T ss_pred EEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCC
Confidence 9999998333333 689997 7774211 122333321 123 799999999999999999999633
Q ss_pred ce----EEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeE----EEEe--CCc--cCCCc----------
Q psy17058 261 KE----VMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTV----SWVK--YIA--PFDRN---------- 318 (471)
Q Consensus 261 ~~----~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i----~W~~--~~~--~~~~~---------- 318 (471)
.. ...+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+ .|++ ++. .+...
T Consensus 315 ~~~~~~~~~~~l~V~~~p~~~~~~-~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~ 393 (585)
T 2ocw_A 315 LQEGSPIQAWQLFVNEESTIPRSP-TVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEG 393 (585)
T ss_pred ccccCceeeEEEEEecccccccCC-cceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCC
Confidence 33 277889999888776554 4567889999999999999998876 7999 776 33210
Q ss_pred -ccccc--cCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCc
Q psy17058 319 -LERDE--LTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGE 395 (471)
Q Consensus 319 -~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 395 (471)
..... .....+|.|.+++.+|+|.|+|.| |..|..+..+.|.|...|
T Consensus 394 r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~----------------------------- 443 (585)
T 2ocw_A 394 RLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGE----------------------------- 443 (585)
T ss_pred CEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCc-----------------------------
Confidence 00000 122345999999999999999999 999999999999998753
Q ss_pred eEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEec----ccCCceEEEecCCCCCCCce---------EEe--
Q psy17058 396 YVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAI----GATPISIRWQPLQGYFPSHV---------VEY-- 460 (471)
Q Consensus 396 ~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~----g~p~~~v~W~~~g~~l~~~~---------~~~-- 460 (471)
|.+.. +....+.+|+.+.|.|.+. +.|.+.|+|+|||..|..+. ...
T Consensus 444 -----------------p~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~ 505 (585)
T 2ocw_A 444 -----------------PNLKV-PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDEN 505 (585)
T ss_pred -----------------ccccc-CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCc
Confidence 44443 5667899999999999997 77889999999998874331 111
Q ss_pred --cCeEEECCCC
Q psy17058 461 --NGELRLGPHK 470 (471)
Q Consensus 461 --~~~l~i~~~~ 470 (471)
.++|.|.+++
T Consensus 506 ~~~~~L~i~~v~ 517 (585)
T 2ocw_A 506 SRLVSLTLNLVT 517 (585)
T ss_pred ccEEEEEECCCC
Confidence 1488888875
No 18
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=6.4e-41 Score=350.73 Aligned_cols=448 Identities=19% Similarity=0.262 Sum_probs=95.2
Q ss_pred CCCCCeeeecccc----ccccccccccccee---eeccceEEEEec--CcEEEEEEeeeCCccEEEecc--chh-h----
Q psy17058 14 SNQGNALTTTPSR----QETNAFAGEVTQFV---SAENHEVTVYEG--GDAELKCNTYYAPGRWMWLNF--YSF-L---- 77 (471)
Q Consensus 14 ~~~g~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~v~~g--~~~~l~C~~~~~~~~~~w~~~--~~~-~---- 77 (471)
...|.+.+..... ...+.+.....+++ ...+..+.+.+| +.++|.|.+..+...+.|++. ... .
T Consensus 96 ~d~G~Y~C~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~p~~~v~w~~~~~~~~~~~~~~ 175 (772)
T 3v2a_R 96 NDTGAYKCFYRETDLASVIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGN 175 (772)
T ss_dssp ------------------------------------CEEEEEEESSCCCEEEECCCCSCSSCCEEEEEETTTEEECCCSS
T ss_pred hhCEeEEEEEcCCCEEEEEEEEECCCCCCceEcCcccceeEEEecCCCCeEEEEccCCCCCcEEEEEecCCCccccCCCc
Confidence 4567777765422 22233322223333 233567889999 889999999988889999885 111 0
Q ss_pred -------------------hheeeeeeeec---------------CCCCcEEEcCCc-eeecCCCcEEEEee-CC--CCC
Q psy17058 78 -------------------SLIIICLAYLS---------------PQANEVQVTPRQ-QSAPEGSQVTIECK-SN--DPS 119 (471)
Q Consensus 78 -------------------~~~~~c~~~~~---------------~~~~~v~~~p~~-~~v~~G~~v~l~C~-~~--~p~ 119 (471)
...|.|.+... ..++.+.+.|.. ..+.+|++++|.|. .+ .+.
T Consensus 176 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~ 255 (772)
T 3v2a_R 176 RISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVG 255 (772)
T ss_dssp SCEEETTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCC
T ss_pred eeecCCCCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCc
Confidence 02367877521 334556666654 68999999999999 43 556
Q ss_pred CeEEEEeCCCCCCCC--------------CcccCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeee
Q psy17058 120 ATIKWSKDNQEQLPP--------------NMIAGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRI 185 (471)
Q Consensus 120 ~~v~W~~~~~~~~~~--------------~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~ 185 (471)
+.+.|++++...... .......|.|.+++.+|+|.|+|.+.|..+. ......|.|. .+|.+..
T Consensus 256 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~--~~p~~~~ 332 (772)
T 3v2a_R 256 IDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMT-KKNSTFVRVH--EKPFVAF 332 (772)
T ss_dssp CEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCE-EEEEEEEEEE--CCCC---
T ss_pred eeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcc-eeEEEEEEEe--CCCeeEe
Confidence 789999994432111 1114468999999999999999999988775 4445555554 5565443
Q ss_pred cC--CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCce-
Q psy17058 186 HP--NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKE- 262 (471)
Q Consensus 186 ~~--~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~- 262 (471)
.+ .....+.+|+.++|.|.+ .+.|.+.+.|++++..+.... .+. ....|.|.++..+|+|.|+|.+.|..+..
T Consensus 333 ~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~g~~l~~~~--~~~-~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 408 (772)
T 3v2a_R 333 GSGMESLVEATVGERVRIPAKY-LGYPPPEIKWYKNGIPLESNH--TIK-AGHVLTIMEVSERDTGNYTVILTNPISKEK 408 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCcEEEcCCCcEEEEEEE-eeeCCCeEEEEECCEeCCCCc--eEc-cceeEEEecCChhcCceEEEEEEECCcCeE
Confidence 32 234567899999999999 678889999999988754432 222 35789999999999999999999987764
Q ss_pred -EEEEEEEEEeCCceeeCCC--ccEEecCCCcEEEEEEEeecCCCe-EEEEeCCcc------------------------
Q psy17058 263 -VMNAYIHVLTLPAVTITPS--EYVSVRPGEPLTLECEATGRPMPT-VSWVKYIAP------------------------ 314 (471)
Q Consensus 263 -~~~~~l~V~~~p~~~~~~~--~~~~~~~g~~v~l~C~~~g~p~~~-i~W~~~~~~------------------------ 314 (471)
+..+.|.|..+|.+..... ....+.+|+.+.|.|.+.|.|.|. +.|++++..
T Consensus 409 ~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (772)
T 3v2a_R 409 QSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSV 488 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCcccccccc
Confidence 4566777877777643211 112478899999999999999996 999996332
Q ss_pred --------CCCccc-----ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCC--CCCcc
Q psy17058 315 --------FDRNLE-----RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPR--PGADI 379 (471)
Q Consensus 315 --------~~~~~~-----~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~--~~~~~ 379 (471)
+..... .........|.|.++ +|+|.|+|.|.|..|..+..+.|.|..+|.+...... .....
T Consensus 489 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~~~p~~~~~~G~~ 566 (772)
T 3v2a_R 489 EDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQES 566 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEECCceeeccCCcccccCCc
Confidence 100000 001112256777776 7899999999999999999999998876644221100 00000
Q ss_pred -----ccCC-----CcccCC---C---------------------------CCCC-----ceEEEcCCcce--EEe----
Q psy17058 380 -----LPDG-----DEYYRP---E---------------------------PEEG-----EYVYAVGSNAS--ISC---- 408 (471)
Q Consensus 380 -----~~~~-----~~w~~~---~---------------------------~~~~-----~~~~~~~~~~~--y~c---- 408 (471)
...+ ..|... . ..+. +.|.++..+|+ |+|
T Consensus 567 v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 646 (772)
T 3v2a_R 567 VSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQD 646 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEe
Confidence 0111 167211 0 0121 57889999998 999
Q ss_pred ----------------eecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEE----ecCeEEECC
Q psy17058 409 ----------------SVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVE----YNGELRLGP 468 (471)
Q Consensus 409 ----------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~----~~~~l~i~~ 468 (471)
+..+|.|...+.+..+.+|+.+.|.|.+.|.|+|.|+|+|||.+|..+.++ .+++|.|.+
T Consensus 647 ~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~L~I~~ 726 (772)
T 3v2a_R 647 RKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRR 726 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCCcEEEECc
Confidence 246788887777788999999999999999999999999999999876543 367888887
Q ss_pred CC
Q psy17058 469 HK 470 (471)
Q Consensus 469 ~~ 470 (471)
++
T Consensus 727 v~ 728 (772)
T 3v2a_R 727 VR 728 (772)
T ss_dssp --
T ss_pred CC
Confidence 65
No 19
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=306.82 Aligned_cols=302 Identities=16% Similarity=0.210 Sum_probs=210.7
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc------cCcEEEEcCCCCCCCeEEEEEEEec
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI------AGETLIINGITKADEGVYICSIQNA 162 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~------~~~~L~i~~v~~~D~G~Y~C~~~~~ 162 (471)
..+.+.++|..+.|.+|+++.|.|. .+.|.+.+.|++++ ..+..... ....|.|.+++.+|+|.|+|.|.|.
T Consensus 47 ~~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~-~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~ 125 (423)
T 3qs7_E 47 QSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKH-SSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSE 125 (423)
T ss_dssp ---------CEEEECSSCCEEEEEECSCCSSCEEEEEETT-EEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC-
T ss_pred CCCcceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECC-CccCccceeccccceEEEEEEeecCcccCEEEEEEEEcC
Confidence 3456667788999999999999999 88999999999984 33322111 2247999999999999999999998
Q ss_pred CCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC---CceEEeeeceEE
Q psy17058 163 QGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP---DVEVYQELGVLR 239 (471)
Q Consensus 163 ~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~---~~~~~~~~~~l~ 239 (471)
.+. ......|.|. .+|.+... ....+..|+.++|.|.+ .|.|.+.++|++++..+.... ...+......+
T Consensus 126 ~g~-~~~~~~l~V~--~~p~~~~~--~p~~~~~~~~~~L~C~a-~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l- 198 (423)
T 3qs7_E 126 ATN-YTILFTVSIR--NTLLYTLR--RPYFRKMENQDALVCIS-ESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVL- 198 (423)
T ss_dssp -CE-EEEEEEEEEC-------CEE--EEEEEECSSSSCEEEEE-EESSCCEEEEEEC-------------CEEECCSEE-
T ss_pred CCc-EEEEEEEEEe--cCcccccc--CCcEeccCCceEEEEEE-eeecCCeEEEEECCCCCccccccccccccccceEE-
Confidence 876 4444455554 44443211 22345578889999999 889999999999887532110 01111111111
Q ss_pred EeccCCCCCeEEEEEEEcCCCceEE-EEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCCCeEEEEeCCccCCC
Q psy17058 240 FNNIATGDEGKYTCIAENSAGKEVM-NAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPMPTVSWVKYIAPFDR 317 (471)
Q Consensus 240 i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~~i~W~~~~~~~~~ 317 (471)
...|+|.|+|.|.|..|.... .+.|.|...|.. +.....+.+|+.+.|.|.+.| .|.+.+.|++++..+..
T Consensus 199 ----~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~---~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~ 271 (423)
T 3qs7_E 199 ----HELFGTDIRCCARNELGRECTRLFTIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEE 271 (423)
T ss_dssp ----CCCCSSCEEEEEECSSCEEEEECEEEESSSCCCS---STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCG
T ss_pred ----ecccCeEEEEEEEcCCCCcceeeEEEEEecCCcc---CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccc
Confidence 578999999999999887543 366766655544 233568899999999999999 67789999999988754
Q ss_pred cccc--------cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCC
Q psy17058 318 NLER--------DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRP 389 (471)
Q Consensus 318 ~~~~--------~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~ 389 (471)
.... .......+|.|.+++.+|+|.|+|.|.|. .+.++.|.|..+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~------------------------ 324 (423)
T 3qs7_E 272 GNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEK------------------------ 324 (423)
T ss_dssp GGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESS------------------------
T ss_pred cceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeC------------------------
Confidence 2110 01223457999999999999999999998 777888888875
Q ss_pred CCCCCceEEEcCCcceEEeeecCCeeEEcC--CeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCc
Q psy17058 390 EPEEGEYVYAVGSNASISCSVEPPRITLRP--VRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSH 456 (471)
Q Consensus 390 ~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~ 456 (471)
|.+...+ ....+.+|+++.|.|.+.|+|+|.|+|+|||++|..+
T Consensus 325 -----------------------p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~ 370 (423)
T 3qs7_E 325 -----------------------GFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCE 370 (423)
T ss_dssp -----------------------CEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECB
T ss_pred -----------------------CcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCc
Confidence 4555444 3467889999999999999999999999999998654
No 20
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=1.3e-37 Score=311.13 Aligned_cols=319 Identities=16% Similarity=0.240 Sum_probs=245.5
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCcee
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNVF 167 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~ 167 (471)
..||.+...+....+.+|++++|.|. .+ .+.|+++ +..+. .......|.|.+++.+|+|.|+|.+.| |.
T Consensus 34 ~~pP~i~~~~~~~~v~~G~~v~l~C~~~~----~v~W~~~-~~~~~-~~~~~~~L~I~~~~~~D~G~Y~C~a~n--g~-- 103 (524)
T 2ec8_A 34 PSPPSIHPGKSDLIVRVGDEIRLLCTDPG----FVKWTFE-ILDET-NENKQNEWITEKAEATNTGKYTCTNKH--GL-- 103 (524)
T ss_dssp CCCCEEESCCSEEECCTTSCEEEEEECTT----EEEEEEE-SSSCC-EEECSSEEEESSCCSTTCEEEEEEETT--SC--
T ss_pred CCCCccCCCCceEEEeCCCeEEEEEeCCc----eEEEcCC-Ccccc-ccCccceEEEcccchhhCEEEEEeecC--Cc--
Confidence 46777777778889999999999999 44 8999999 55553 222678999999999999999999988 32
Q ss_pred eeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEe-CCCCCCcCCCceEEeeeceEEEeccCCC
Q psy17058 168 QDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIR-PDNDGKFGPDVEVYQELGVLRFNNIATG 246 (471)
Q Consensus 168 ~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 246 (471)
+ ..+.|.+..+|.... ......+.+|+.++|.|.+ .+.+.+.+.|++ ++..+....++.... .+.|.|.+++.+
T Consensus 104 ~--~~~~l~V~~p~~~~~-~~~~~~v~~G~~v~l~C~~-~~~~~~~v~W~~~~g~~l~~~~~~~~~~-~~~L~i~~~~~~ 178 (524)
T 2ec8_A 104 S--NSIYVFVRDPAKLFL-VDRSLYGKEDNDTLVRCPL-TDPEVTNYSLKGCQGKPLPKDLRFIPDP-KAGIMIKSVKRA 178 (524)
T ss_dssp E--EEEEEECCCSSCSBC-CCCCCCEETTSCEEECCCB-SCCCCSCEEEECSSSCCCCSSCEEEEET-TTEEEEESCCGG
T ss_pred c--eEEEEEECCCCcccc-cccceEEEcCCeEEEECcC-CCCccceEEEEccCCcCcCCCCceeECC-CccEEEeccchh
Confidence 3 344444445555443 3445678899999999999 566668999998 666654444444333 668999999999
Q ss_pred CCe-EEEEEEEcCCCce-EEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEeecCCCe-EEEEeCCccC--CC
Q psy17058 247 DEG-KYTCIAENSAGKE-VMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPT-VSWVKYIAPF--DR 317 (471)
Q Consensus 247 d~G-~Y~C~~~~~~~~~-~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~-i~W~~~~~~~--~~ 317 (471)
|+| .|+|.+.|..+.. +..+.|.|. .+|.+...+. ...+.+|+++.|.|.+.|.|.+. +.|++++..+ ..
T Consensus 179 d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~-~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~ 257 (524)
T 2ec8_A 179 YHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKA-SYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQE 257 (524)
T ss_dssp GTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCS-EEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCE
T ss_pred hCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCC-cceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCcccc
Confidence 999 9999999876654 446778886 5666666654 45889999999999999999886 9999999883 21
Q ss_pred ccc--cc---ccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCC
Q psy17058 318 NLE--RD---ELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPE 392 (471)
Q Consensus 318 ~~~--~~---~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~ 392 (471)
... .. .......|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 258 ~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~--------------------------- 310 (524)
T 2ec8_A 258 KYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDK--------------------------- 310 (524)
T ss_dssp EEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESS---------------------------
T ss_pred ccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEecc---------------------------
Confidence 111 00 2345689999999999999999999999999999999999875
Q ss_pred CCceEEEcCCcceEEeeecCCeeEEcCC---eeeeeCCCeEEEEEEecccCCce-EEEecCCCCCCCce-EE--------
Q psy17058 393 EGEYVYAVGSNASISCSVEPPRITLRPV---RQTVKPGDIANIRCSAIGATPIS-IRWQPLQGYFPSHV-VE-------- 459 (471)
Q Consensus 393 ~~~~~~~~~~~~~y~c~~~~p~~~~~~~---~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~g~~l~~~~-~~-------- 459 (471)
|.+...+. ...+.+|+.+.|.|.+.|.|.|. ++|+|||.++.... ++
T Consensus 311 --------------------p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~ 370 (524)
T 2ec8_A 311 --------------------GFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESN 370 (524)
T ss_dssp --------------------CEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSC
T ss_pred --------------------CceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCC
Confidence 55655443 58899999999999999999998 99999999997654 22
Q ss_pred --ecCeEEECCCC
Q psy17058 460 --YNGELRLGPHK 470 (471)
Q Consensus 460 --~~~~l~i~~~~ 470 (471)
..++|.|.+++
T Consensus 371 ~~~~~~L~i~~v~ 383 (524)
T 2ec8_A 371 IRYVSELHLTRLK 383 (524)
T ss_dssp CEEEEEEEECSCC
T ss_pred ceeEEEEEEeecC
Confidence 13578888775
No 21
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=2.2e-38 Score=310.58 Aligned_cols=342 Identities=17% Similarity=0.213 Sum_probs=239.6
Q ss_pred eeccceEEEEecCcEEEEEEeeeCCccE-----EEeccchhh---------------hheeeeeeeec------------
Q psy17058 41 SAENHEVTVYEGGDAELKCNTYYAPGRW-----MWLNFYSFL---------------SLIIICLAYLS------------ 88 (471)
Q Consensus 41 ~~~~~~~~v~~g~~~~l~C~~~~~~~~~-----~w~~~~~~~---------------~~~~~c~~~~~------------ 88 (471)
...++++.|.+|+.++|.|.+..+.+.+ .|.+....+ ...|.|.+...
T Consensus 3 ~~~P~~~~v~~G~~v~L~C~~~gp~p~~~~~~~~w~k~~~~~~~~~~~~l~i~~v~~d~gY~C~a~~~~~~~~~~~~l~V 82 (450)
T 1z7z_I 3 SVSPSKVILPRGGSVLVTCSTSCDQPMLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTV 82 (450)
T ss_dssp EEESSEEEEETTEEEEEEEECCSSCCCEEEECSSSCEEECCSSTTTEEEEEEEEECSCBCCEEEEEETTEEEEEECEEEE
T ss_pred ccCCCceEEecCCcEEEEEEccCCCcccccccceeeecceEecCCCceEEEEEecccCCeeEEEEeCCCCcceeEEEEEE
Confidence 3456789999999999999999877777 888765522 11267877421
Q ss_pred -CCCCcEEEcCCceeecCCCcEEEEee-CCCCCC---eEEEEeCCCCCCCCCc----ccCcEEEEcCCCCCCCeEEEEEE
Q psy17058 89 -PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSA---TIKWSKDNQEQLPPNM----IAGETLIINGITKADEGVYICSI 159 (471)
Q Consensus 89 -~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~---~v~W~~~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~~ 159 (471)
..|..+.+.|.+..+.+|+++.|.|. .+.+.+ .|.|+|+ +..+.... .....|.|.+++.+|+|.|+|.|
T Consensus 83 ~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~-g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 161 (450)
T 1z7z_I 83 YWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRG-EKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRT 161 (450)
T ss_dssp EBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEET-TEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEE
T ss_pred EeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeC-CEEeecccccccccceEEEEEeeccccCceEEEEE
Confidence 23334446677788999999999999 777776 8999999 55443221 13468999999999999999999
Q ss_pred EecCCce-------eeeeEEEEEeec--cCCeeeecCCCceeEEcCCeEEEEEEccCCC-C--CCeEEEEeCCCCCCcCC
Q psy17058 160 QNAQGNV-------FQDYASIQVDKR--EMPRIRIHPNASQTFIVGDRADIQCVLEAGE-P--SPTQTWIRPDNDGKFGP 227 (471)
Q Consensus 160 ~~~~~~~-------~~~~~~l~v~~~--~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~-p--~~~v~W~~~~~~~~~~~ 227 (471)
.|..+.. .+....+.|... .+|.+.. ...+.+|+.++|.|.+ .+. | .+.+.|++++..+..
T Consensus 162 ~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~----~~~v~~G~~v~l~C~~-~g~~P~~~~~~~W~~~~~~~~~-- 234 (450)
T 1z7z_I 162 ELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS----PRVLEVDTQGTVVCSL-DGLFPVSEAQVHLALGDQRLNP-- 234 (450)
T ss_dssp EEECGGGTSCEEEEECCCEECEECCCCSSCCEEEC----CSEEETTSEEEEEEEE-ESCTTGGGCEEEEEETTEECCC--
T ss_pred EcccCCCCceEEeeccCccceeeeccCCCCCEecC----ceeEEeCCcEEEEEEe-eCCCCCCceEEEEeCCCEeCCc--
Confidence 9976531 112233333321 2222221 1468899999999999 555 7 789999999876443
Q ss_pred CceEEeeeceEEE---eccCCCCCe--EEEEEEEcCCCceEEEEEEEEEe--CCceeeCCCccEEecCCCcEEEEEEEee
Q psy17058 228 DVEVYQELGVLRF---NNIATGDEG--KYTCIAENSAGKEVMNAYIHVLT--LPAVTITPSEYVSVRPGEPLTLECEATG 300 (471)
Q Consensus 228 ~~~~~~~~~~l~i---~~~~~~d~G--~Y~C~~~~~~~~~~~~~~l~V~~--~p~~~~~~~~~~~~~~g~~v~l~C~~~g 300 (471)
+.... ...+.+ .+++.+|+| .|+|.+.|..+.....+.|.|.. +|.+... ...+.+|+.+.|.|.+.
T Consensus 235 ~~~~~--~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~---~~~v~~G~~v~l~C~~~- 308 (450)
T 1z7z_I 235 TVTYG--NDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILT---KPEVSEGTEVTVKCEAH- 308 (450)
T ss_dssp EEEEE--TTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEES---CSEEETTCEEEEEEEC--
T ss_pred eEEec--CCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecC---CeeEeCCCcEEEEEecC-
Confidence 22222 222222 267899999 99999999988888888899887 4444433 23788999999999997
Q ss_pred cCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCC----ceEEEEEEEEecCCCCCCCCCCCC
Q psy17058 301 RPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAG----TEEKVITVAVEHRPEYGPISPRPG 376 (471)
Q Consensus 301 ~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~~p~~~~~~~~~~ 376 (471)
|.+.+.| +|..+.. ......|.|..+..+|+|.|+|.|.|..+ ....++.|.|..+
T Consensus 309 -p~p~i~W--~g~~~~~------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~----------- 368 (450)
T 1z7z_I 309 -PRAKVTL--NGVPAQP------LGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYG----------- 368 (450)
T ss_dssp ------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEE-----------
T ss_pred -CCCEeEE--CCEEcCC------CCceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecC-----------
Confidence 8889999 6666521 22345899999999999999999997655 3346788888765
Q ss_pred CccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcC--CeeeeeCCCeEEEEEEecccCCceEEEecCCCC
Q psy17058 377 ADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRP--VRQTVKPGDIANIRCSAIGATPISIRWQPLQGY 452 (471)
Q Consensus 377 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~ 452 (471)
|.+...+ .+..+.+|+.+.|.|.+.|+|+|.|+|+|||..
T Consensus 369 ------------------------------------P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~ 410 (450)
T 1z7z_I 369 ------------------------------------PRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTF 410 (450)
T ss_dssp ------------------------------------EECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTE
T ss_pred ------------------------------------CceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcc
Confidence 4554433 567899999999999999999999999999983
No 22
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=8.9e-38 Score=299.50 Aligned_cols=321 Identities=23% Similarity=0.353 Sum_probs=239.1
Q ss_pred ceeeeccceEEE---EecCcEEEEEEee-eCCccEEEeccchhhh-------------------------heeeeeeeec
Q psy17058 38 QFVSAENHEVTV---YEGGDAELKCNTY-YAPGRWMWLNFYSFLS-------------------------LIIICLAYLS 88 (471)
Q Consensus 38 ~~~~~~~~~~~v---~~g~~~~l~C~~~-~~~~~~~w~~~~~~~~-------------------------~~~~c~~~~~ 88 (471)
+.+...++++.+ .+|+.+.|.|.+. .|.+.+.|++++..+. ..|.|.|...
T Consensus 6 P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~N~ 85 (384)
T 3kld_A 6 PVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATNS 85 (384)
T ss_dssp EEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEEEEET
T ss_pred CEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEEEEcC
Confidence 344555666666 5889999999998 5778999998654321 2478888643
Q ss_pred C-----CCCcEEE---------cCCceeecCCCcEEEEee--CCCCCCeEEEEeCCCCCCC-CCcc----cCcEEEEcCC
Q psy17058 89 P-----QANEVQV---------TPRQQSAPEGSQVTIECK--SNDPSATIKWSKDNQEQLP-PNMI----AGETLIINGI 147 (471)
Q Consensus 89 ~-----~~~~v~~---------~p~~~~v~~G~~v~l~C~--~~~p~~~v~W~~~~~~~~~-~~~~----~~~~L~i~~v 147 (471)
. ....+.+ .+..+.+.+|+.+.|.|. .+.+.+.+.|+++ +..+. .... ..+.|.|.++
T Consensus 86 ~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~-~~~~~~~~~~~~~~~~~~L~I~~v 164 (384)
T 3kld_A 86 FGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFN-EYPSYQDNRRFVSQETGNLYIAKV 164 (384)
T ss_dssp TEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEET-TEECCCSSSEEECTTTCCEEESSC
T ss_pred cccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEEC-CCCCEeeccEEEEcCCCcEEEeec
Confidence 1 1222222 123467899999999997 3556789999998 43332 2211 4568999999
Q ss_pred CCCCCeEEEEEEEecCCceee--eeEEEEEe-----eccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCC
Q psy17058 148 TKADEGVYICSIQNAQGNVFQ--DYASIQVD-----KREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPD 220 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~~~~~--~~~~l~v~-----~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~ 220 (471)
+.+|+|.|+|.|.|..+.... ....+.+. ....|.+....+....+.+|+.++|.|.+ .+.|.+.+.|++++
T Consensus 165 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~-~g~P~p~i~W~k~~ 243 (384)
T 3kld_A 165 EKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFA-LGNPVPTILWRRAD 243 (384)
T ss_dssp CGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEE-EEESCCEEEEEETT
T ss_pred CHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEE-eecCCCcEEEEeCC
Confidence 999999999999998765211 11222222 11234444444556678899999999999 78899999999965
Q ss_pred CCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEee
Q psy17058 221 NDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATG 300 (471)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g 300 (471)
.. .+..........+.|.|.+++.+|+|.|+|.|.|..|.......|.|..+|.+...+ ....+.+|+++.|.|.+.|
T Consensus 244 ~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~-~~~~v~~g~~v~l~C~~~g 321 (384)
T 3kld_A 244 GK-PIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQII-NDIHVAMEESVFWECKANG 321 (384)
T ss_dssp CC-CCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECC-CCEEECTTCCEEEECEEEE
T ss_pred Cc-cccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCC-CceEecCCCCEEEEeECCc
Confidence 53 222223333336689999999999999999999999998888999999888876654 3568899999999999999
Q ss_pred cCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 301 RPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 301 ~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
.|.|.+.|++++..+....... ...++|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 322 ~P~p~i~W~k~g~~l~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 322 RPKPTYRWLKNGDPLLTRDRIQ--IEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp ESCCEEEEEETTEECCCBTTEE--EETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred cCCCeEEEEECCEECCCCccEE--EeCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 9999999999998876433211 2345899999999999999999999999999999998863
No 23
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=4.6e-37 Score=296.73 Aligned_cols=327 Identities=20% Similarity=0.312 Sum_probs=245.2
Q ss_pred cccceeeeccceEEEEecCcEEEEEEee-eCCccEEEeccchhh------------------------------hheeee
Q psy17058 35 EVTQFVSAENHEVTVYEGGDAELKCNTY-YAPGRWMWLNFYSFL------------------------------SLIIIC 83 (471)
Q Consensus 35 ~~~~~~~~~~~~~~v~~g~~~~l~C~~~-~~~~~~~w~~~~~~~------------------------------~~~~~c 83 (471)
..|.+....++++.+.+|+.++|.|.+. .+.+.+.|++++..+ ...|.|
T Consensus 15 ~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C 94 (404)
T 3p3y_A 15 QPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQC 94 (404)
T ss_dssp CCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEE
T ss_pred CCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEE
Confidence 3455566667889999999999999998 466789999855321 123678
Q ss_pred eeeec--------------CCCCcEEEcCCceeecCCCcEEEEee--CCCCCCeEEEEeCCCCCCCCCcc----cCcEEE
Q psy17058 84 LAYLS--------------PQANEVQVTPRQQSAPEGSQVTIECK--SNDPSATIKWSKDNQEQLPPNMI----AGETLI 143 (471)
Q Consensus 84 ~~~~~--------------~~~~~v~~~p~~~~v~~G~~v~l~C~--~~~p~~~v~W~~~~~~~~~~~~~----~~~~L~ 143 (471)
.+... ..+......+....+.+|+.+.|.|. .+.|.+.+.|++++...+..... .++.|.
T Consensus 95 ~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~ 174 (404)
T 3p3y_A 95 FARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLY 174 (404)
T ss_dssp EEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSCEE
T ss_pred EEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCcEE
Confidence 77532 11111222234578999999999998 67788999999995554443222 567899
Q ss_pred EcCCCCCC-CeEEEEEEEecCCceeeee--EEEEEeec-----cCCeeeecC--CCceeEEcCCeEEEEEEccCCCCCCe
Q psy17058 144 INGITKAD-EGVYICSIQNAQGNVFQDY--ASIQVDKR-----EMPRIRIHP--NASQTFIVGDRADIQCVLEAGEPSPT 213 (471)
Q Consensus 144 i~~v~~~D-~G~Y~C~~~~~~~~~~~~~--~~l~v~~~-----~~p~~~~~~--~~~~~v~~g~~~~L~C~~~~~~p~~~ 213 (471)
|.+++.+| +|.|+|.+.|..+...... ..+.+... .+|.+.... .....+.+|+.++|.|.+ .+.|.+.
T Consensus 175 i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~-~g~p~~~ 253 (404)
T 3p3y_A 175 FSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA-SGVPTPD 253 (404)
T ss_dssp ESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCB-CCSSCCE
T ss_pred EEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEE-CCCCCCc
Confidence 99999999 5999999998776522222 23333311 112221111 123457899999999999 7888899
Q ss_pred EEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEE
Q psy17058 214 QTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLT 293 (471)
Q Consensus 214 v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~ 293 (471)
+.|++++..+..... ......+.|.|.+++.+|+|.|+|.+.|..+..+..+.|.|..+|.+...+. ...+.+|+.+.
T Consensus 254 v~W~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~-~~~v~~g~~~~ 331 (404)
T 3p3y_A 254 IAWYKKGGDLPSDKA-KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPK-NLILAPGEDGR 331 (404)
T ss_dssp EEEEETTBCCCTTTE-EEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCC-CEEECTTCCEE
T ss_pred EEEEECCEECCCCcc-cccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCC-cceeecCCcEE
Confidence 999999987544332 3444467899999999999999999999999988999999999888776653 56889999999
Q ss_pred EEEEEeecCCCeEEEEeCCccCCCccc-ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 294 LECEATGRPMPTVSWVKYIAPFDRNLE-RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 294 l~C~~~g~p~~~i~W~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
|.|.+.|+|.+.+.|++++..+..... ........+|.|.+++.+|+|.|+|.|.|..|....++.|.|.+
T Consensus 332 l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 332 LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999999988764321 11222446899999999999999999999999999999998864
No 24
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=1.8e-36 Score=278.04 Aligned_cols=269 Identities=24% Similarity=0.403 Sum_probs=221.1
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-------cCcEEEEcCCCCCCCeEEEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-------AGETLIINGITKADEGVYICSIQ 160 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~~ 160 (471)
..||.|...|.+..+.+|+.++|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 81 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKD-NREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYAS 81 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEET-TEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEEC-CEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEE
Confidence 36899999999999999999999999 7788899999999 555443221 35789999999999999999999
Q ss_pred ecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEE--eeeceE
Q psy17058 161 NAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVY--QELGVL 238 (471)
Q Consensus 161 ~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~l 238 (471)
|..+. ......|.| ..+|.+.........+.+|+.++|.|.+ .+.|.+.+.|++++..+......... .....|
T Consensus 82 n~~g~-~~~~~~l~V--~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L 157 (284)
T 2rik_A 82 NVAGK-DSCSAQLGV--QEPPRFIKKLEPSRIVKQDEHTRYECKI-GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVL 157 (284)
T ss_dssp ETTEE-EEEEEEEEE--ECCCEEEECCCSEEEEETTCCEEEEEEE-ESSSCCEEEEEETTEECCCSSSEEEEEETTEEEE
T ss_pred ECCce-EEEEEEEEc--cCCCcccccCCCceEecCCceEEEEEEE-eeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEE
Confidence 98766 444444544 4677766665555668899999999999 67899999999999876655544433 224579
Q ss_pred EEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCc
Q psy17058 239 RFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRN 318 (471)
Q Consensus 239 ~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~ 318 (471)
.|.+++.+|+|.|+|.+.|..+.....+.|.|..+|.+...+. ...+.+|+.+.|.|.+.|+|.+.+.|++++..+...
T Consensus 158 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~-~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~ 236 (284)
T 2rik_A 158 EMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPH-PVETLKGADVHLECELQGTPPFQVSWHKDKRELRSG 236 (284)
T ss_dssp EECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCC-CEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBT
T ss_pred EECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCC-cceecCCCeEEEEEEEEecCCCEEEEEECCEECcCC
Confidence 9999999999999999999999888899999999888776553 467889999999999999999999999999887643
Q ss_pred cc--ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 319 LE--RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 319 ~~--~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
.. .........|.|.+++.+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 237 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 237 KKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp TTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 22 1222344789999999999999999999999999999999885
No 25
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=307.15 Aligned_cols=319 Identities=13% Similarity=0.167 Sum_probs=218.1
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc------cCcEEEEcCCCCCCCeEEEEEEEec
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI------AGETLIINGITKADEGVYICSIQNA 162 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~------~~~~L~i~~v~~~D~G~Y~C~~~~~ 162 (471)
......+++..+.|.+|++++|.|. .+.+...+.|+++ +..+..... ...+|.|.+++.+|+|.|+|.+.|.
T Consensus 47 ~~~~~~~~~~~~~v~~g~~~~L~c~~~~~~~~~~~W~~~-~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~ 125 (527)
T 3qs9_E 47 QSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFK-HSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSE 125 (527)
T ss_dssp ---------CEEEECSSCCEEEEEECSCCSSCEEEEEET-TEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC-
T ss_pred ccCcceeeeeeEEEeccccEEEEEEEecCCceeEEEEec-CCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEec
Confidence 3344555666889999999999999 6777789999998 443222111 2245999999999999999999987
Q ss_pred CCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEec
Q psy17058 163 QGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNN 242 (471)
Q Consensus 163 ~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~ 242 (471)
.+. ......+.|. |.....+........|+.+.|.|.+ .+.|.+.++|++++..+..... .....-......
T Consensus 126 ~~~-~~~~~~v~v~----~~~~~~~~~p~~~~~~~~~~L~C~a-~G~P~P~i~W~~~~~~~~~~~~--~~~~~~~~~~~~ 197 (527)
T 3qs9_E 126 ATN-YTILFTVSIR----NTLLYTLRRPYFRKMENQDALVCIS-ESVPEPIVEWVLCDSQGESCKE--ESPAVVKKEEKV 197 (527)
T ss_dssp -CE-EEEEEEEEEC---------CEEEEEEEECSSSSCEEEEE-EESSCCEEEEEEC---------------CEEECCSE
T ss_pred ccc-EEEEEEEEEC----CceeeccCCCcEEecCCceEEEEEE-ceecCCeEEEEECCCCCccccc--cCCcEEEEeeee
Confidence 765 3333333332 2211122222234567888999999 8899999999998765321110 000011122233
Q ss_pred cCCCCCeEEEEEEEcCCCceEEE-EEEEEEeCCceeeCCCccEEecCCCcEEEEEEEe-ecCCCeEEEEeCCccCCCccc
Q psy17058 243 IATGDEGKYTCIAENSAGKEVMN-AYIHVLTLPAVTITPSEYVSVRPGEPLTLECEAT-GRPMPTVSWVKYIAPFDRNLE 320 (471)
Q Consensus 243 ~~~~d~G~Y~C~~~~~~~~~~~~-~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~i~W~~~~~~~~~~~~ 320 (471)
+...|+|.|+|.|.|..|..... +.|.|...|.+ +.....+.+|+.+.|.|.+. |.|.+.+.|++++..+.....
T Consensus 198 ~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~---~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~ 274 (527)
T 3qs9_E 198 LHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNY 274 (527)
T ss_dssp ECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCC---SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGE
T ss_pred ccccCCEEEEEEEEeCCCcccceEEEEEEeccCcc---CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCce
Confidence 45789999999999998876544 77777766655 33467889999999999996 899999999999988754311
Q ss_pred c--------cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCC
Q psy17058 321 R--------DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPE 392 (471)
Q Consensus 321 ~--------~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~ 392 (471)
. .......+|.|.+++.+|+|.|+|.|.|. .+.++.|.|..+
T Consensus 275 ~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~--------------------------- 324 (527)
T 3qs9_E 275 FEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEK--------------------------- 324 (527)
T ss_dssp EEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC-----------------------------
T ss_pred eeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEcc---------------------------
Confidence 0 01223467999999999999999999998 677788888765
Q ss_pred CCceEEEcCCcceEEeeecCCeeEEcC--CeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEE--ecCeEEECC
Q psy17058 393 EGEYVYAVGSNASISCSVEPPRITLRP--VRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVE--YNGELRLGP 468 (471)
Q Consensus 393 ~~~~~~~~~~~~~y~c~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~--~~~~l~i~~ 468 (471)
|.+...+ ....+.+|+.+.|.|.+.|+|+|.|+|+|||++|..+... .+++|.|.+
T Consensus 325 --------------------p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~ 384 (527)
T 3qs9_E 325 --------------------GFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFC 384 (527)
T ss_dssp --------------------CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEEC
T ss_pred --------------------CccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEec
Confidence 4444433 2367888999999999999999999999999998665433 466888887
Q ss_pred CC
Q psy17058 469 HK 470 (471)
Q Consensus 469 ~~ 470 (471)
++
T Consensus 385 v~ 386 (527)
T 3qs9_E 385 NH 386 (527)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 26
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=4.8e-36 Score=288.06 Aligned_cols=316 Identities=22% Similarity=0.383 Sum_probs=234.6
Q ss_pred cceeeeccceEEEEecCcEEEEEEee-eCCccEEEec-cchhh------------------------------hheeeee
Q psy17058 37 TQFVSAENHEVTVYEGGDAELKCNTY-YAPGRWMWLN-FYSFL------------------------------SLIIICL 84 (471)
Q Consensus 37 ~~~~~~~~~~~~v~~g~~~~l~C~~~-~~~~~~~w~~-~~~~~------------------------------~~~~~c~ 84 (471)
|.|.......+.+.+|+.++|.|.+. .+.+.+.|++ ++..+ ...|.|.
T Consensus 4 P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~ 83 (388)
T 2v5m_A 4 PVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACL 83 (388)
T ss_dssp EEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEE
T ss_pred CchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEEE
Confidence 33444444567899999999999998 5677999998 43211 2357888
Q ss_pred eeecC-------------CCCcEEEcCCceeecCCCcEEEEee-CCCC---CCeEEEEeCCCCCCCC------Ccc--cC
Q psy17058 85 AYLSP-------------QANEVQVTPRQQSAPEGSQVTIECK-SNDP---SATIKWSKDNQEQLPP------NMI--AG 139 (471)
Q Consensus 85 ~~~~~-------------~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p---~~~v~W~~~~~~~~~~------~~~--~~ 139 (471)
+.... .+|.+...+....+.+|+.++|.|. .+.+ .+.+.|++++...... +.. ..
T Consensus 84 a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
T 2v5m_A 84 ARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPS 163 (388)
T ss_dssp EEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTT
T ss_pred EEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccC
Confidence 76321 1233333456678999999999999 5443 3789999995433221 111 45
Q ss_pred cEEEEcCCCCCCC-eEEEEEEEecCCceeeee---EEEEEeecc---CCeeeecCCCceeEEcCCeEEEEEEccCCCCCC
Q psy17058 140 ETLIINGITKADE-GVYICSIQNAQGNVFQDY---ASIQVDKRE---MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP 212 (471)
Q Consensus 140 ~~L~i~~v~~~D~-G~Y~C~~~~~~~~~~~~~---~~l~v~~~~---~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~ 212 (471)
+.|.|.+++.+|+ |.|+|.+.|..+...... ..+.|.... .|...........+.+|+.++|.|.+ .+.|.+
T Consensus 164 ~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p 242 (388)
T 2v5m_A 164 GELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPA-QGFPAP 242 (388)
T ss_dssp SCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCC-EEESCC
T ss_pred CcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEEC-CCCCCC
Confidence 7899999999999 999999998754312211 234444221 12211112233467899999999998 678899
Q ss_pred eEEEEeCCCCCCcC----CCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecC
Q psy17058 213 TQTWIRPDNDGKFG----PDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRP 288 (471)
Q Consensus 213 ~v~W~~~~~~~~~~----~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~ 288 (471)
.+.|++++..+... .........+.|.|.+++.+|+|.|+|.+.|..|..+..+.|.|..+|.+.+.+. ...+.+
T Consensus 243 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~-~~~v~~ 321 (388)
T 2v5m_A 243 SFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPP-TQTVDF 321 (388)
T ss_dssp EEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESS-EEEECT
T ss_pred EEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCC-cEEecC
Confidence 99999986553211 1112233467899999999999999999999999988899999998888776653 568899
Q ss_pred CCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 289 GEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 289 g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
|+.+.|.|.+.|+|.+.+.|++++..+.. ..+.|.|.++..+|+|.|+|.|.|..|..+.++.|.|
T Consensus 322 g~~~~l~C~~~g~p~p~i~W~~~g~~i~~--------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 322 GRPAVFTCQYTGNPIKTVSWMKDGKAIGH--------SESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp TSCEEEEEEEEEECCCEEEEEETTEECSC--------CSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCEEEEEEeccccCCeEEEEECCEECcc--------CCCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 99999999999999999999999987642 3468999999999999999999999999999998876
No 27
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=3.8e-36 Score=288.12 Aligned_cols=318 Identities=19% Similarity=0.350 Sum_probs=241.5
Q ss_pred cceeeeccceEEE---EecCcEEEEEEee-eCCccEEEeccchhhh-------------------------heeeeeeee
Q psy17058 37 TQFVSAENHEVTV---YEGGDAELKCNTY-YAPGRWMWLNFYSFLS-------------------------LIIICLAYL 87 (471)
Q Consensus 37 ~~~~~~~~~~~~v---~~g~~~~l~C~~~-~~~~~~~w~~~~~~~~-------------------------~~~~c~~~~ 87 (471)
++.+...+.++.+ .+|+.++|.|.+. .+.+.+.|++++..+. ..|.|.+..
T Consensus 4 ~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n 83 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATN 83 (382)
T ss_dssp EEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEEEE
T ss_pred CCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCCeEEEecccccccCEEEEEEEEc
Confidence 4556666777776 7899999999998 5677999997543221 247888764
Q ss_pred cC-----CCCcEEE---------cCCceeecCCCcEEEEee--CCCCCCeEEEEeCCCCCCC--CC--cc---cCcEEEE
Q psy17058 88 SP-----QANEVQV---------TPRQQSAPEGSQVTIECK--SNDPSATIKWSKDNQEQLP--PN--MI---AGETLII 144 (471)
Q Consensus 88 ~~-----~~~~v~~---------~p~~~~v~~G~~v~l~C~--~~~p~~~v~W~~~~~~~~~--~~--~~---~~~~L~i 144 (471)
.. ....+.+ .+....+.+|+++.|.|. .+.|.+.+.|+++ +..+. .. .. ..+.|.|
T Consensus 84 ~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~L~i 162 (382)
T 1cs6_A 84 ARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLN-EFPNFIPADGRRFVSQTTGNLYI 162 (382)
T ss_dssp TTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEES-STTCBCCCCSSEEECTTTCCEEE
T ss_pred CCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEEC-CCccccccCceEEEecCceEEEE
Confidence 21 1122222 134677999999999998 4568889999999 44321 11 11 4478999
Q ss_pred cCCCCCCCeEEEEEEEecCCce----eeeeEEEEEe----eccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEE
Q psy17058 145 NGITKADEGVYICSIQNAQGNV----FQDYASIQVD----KREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTW 216 (471)
Q Consensus 145 ~~v~~~D~G~Y~C~~~~~~~~~----~~~~~~l~v~----~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W 216 (471)
.+++.+|+|.|+|.+.|..+.. .+....+.+. ...+|.+....+....+.+|+.++|.|.+ .+.|.+.+.|
T Consensus 163 ~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~-~g~p~~~i~W 241 (382)
T 1cs6_A 163 AKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFA-FGNPVPQIKW 241 (382)
T ss_dssp SSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEE-EEESCCEEEE
T ss_pred EeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEE-ccCCCCEEEE
Confidence 9999999999999999876431 1122334432 12245555554556678899999999999 6788899999
Q ss_pred EeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEE
Q psy17058 217 IRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLEC 296 (471)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C 296 (471)
++++..+.. ........|.|.+++.+|+|.|+|.+.|..+.....+.|.|..+|.+...+. ...+.+|+.+.|.|
T Consensus 242 ~~~~~~~~~----~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~-~~~~~~g~~~~l~C 316 (382)
T 1cs6_A 242 RKLDGSQTS----KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVIT-DTEADIGSDLRWSC 316 (382)
T ss_dssp EECCSCCSC----CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCC-CEEEETTCCEEEEC
T ss_pred EECCccccc----EEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCC-ccEEcCCCeEEEEE
Confidence 998876433 1223366899999999999999999999999888889999998888776653 56788999999999
Q ss_pred EEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 297 EATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 297 ~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
.+.|.|.+.+.|++++..+....+. ....+.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 317 ~~~g~p~p~v~W~~~g~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 317 VASGKPRPAVRWLRDGQPLASQNRI--EVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EEEEESCCEEEEEETTEECCCCSSE--EEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EeeeecCCEEEEEECCEECCCCceE--EEECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 9999999999999999887654321 1234589999999999999999999999999999999885
No 28
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=6.6e-35 Score=268.64 Aligned_cols=270 Identities=27% Similarity=0.424 Sum_probs=212.7
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCCC-CCeEEEEeCCCCCCCCCcc---------cCcEEEEcCCCCCCCeEEEEEE
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SNDP-SATIKWSKDNQEQLPPNMI---------AGETLIINGITKADEGVYICSI 159 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~p-~~~v~W~~~~~~~~~~~~~---------~~~~L~i~~v~~~D~G~Y~C~~ 159 (471)
++.|.+.|.+..+.+|+++.|.|. .+.+ .+.+.|++.++..+..... ....|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 678999999999999999999999 6655 6899999944665543211 3468999999999999999999
Q ss_pred EecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceE-EeeeceE
Q psy17058 160 QNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEV-YQELGVL 238 (471)
Q Consensus 160 ~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~-~~~~~~l 238 (471)
.|..+... ...+.|.+..+|.+...+ ....+.+|+.+.|.|.+ .+.|.+.+.|++++..+........ ...++.|
T Consensus 82 ~n~~g~~~--~~~~~l~v~~~~~~~~~~-~~~~~~~g~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L 157 (291)
T 1qz1_A 82 TAEDGTQS--EATVNVKIFQKLMFKNAP-TPQEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYL 157 (291)
T ss_dssp ECTTSCEE--EEEEEEEEECCSEEEECC-SSEEEETTSCEEECCEE-ECSSCCEEEEEETTSCSSTTCCTTEEECTTSCE
T ss_pred EcCCCCee--EEEEEEEeeccccccCCC-CcccccCCCeEEEEEEe-ccCCCCEEEEEECCEEcccCCCceEEEccCCcE
Confidence 99876523 344455555666665554 35578899999999999 6788899999999987654432222 2235689
Q ss_pred EEeccCCCCCeEEEEEEEcCCCc--eEEEEEEEEEeCCceeeCCC-ccEEecCCCcEEEEEEEeecCCCeEEEEeCCccC
Q psy17058 239 RFNNIATGDEGKYTCIAENSAGK--EVMNAYIHVLTLPAVTITPS-EYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPF 315 (471)
Q Consensus 239 ~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~V~~~p~~~~~~~-~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~ 315 (471)
.|.+++.+|+|.|+|.+.|..+. ....+.|.|..+|.+...+. ....+.+|+.+.|.|.+.|.|.+.+.|++++..+
T Consensus 158 ~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~ 237 (291)
T 1qz1_A 158 QIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPI 237 (291)
T ss_dssp EETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEEC
T ss_pred EEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEEC
Confidence 99999999999999999986543 34567788888887766543 2347889999999999999999999999999887
Q ss_pred CCcc----cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 316 DRNL----ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 316 ~~~~----~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
.... ..........|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 238 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 238 ENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp CCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 6432 222334457899999999999999999999999999999999875
No 29
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=9.3e-36 Score=297.50 Aligned_cols=310 Identities=17% Similarity=0.272 Sum_probs=220.0
Q ss_pred EcCCceeecCCCcEEEEee-CCCCCCeEEEEeCC-CCCCC--------------CCcc-----cCcEEEEcCCCCCCCeE
Q psy17058 96 VTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDN-QEQLP--------------PNMI-----AGETLIINGITKADEGV 154 (471)
Q Consensus 96 ~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~-~~~~~--------------~~~~-----~~~~L~i~~v~~~D~G~ 154 (471)
.+|..+.+.+|++++|.|. .+.+.+.+.|+|++ +..+. .+.. ....|.|.+++.+|+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 84 (523)
T 2rcj_C 5 TQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESD 84 (523)
T ss_pred ccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEE
Confidence 4467889999999999999 77788999999974 11111 1111 23489999999999999
Q ss_pred EEEEEEecCCce--eeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC--CeEEEEeCCCCCCcCCC
Q psy17058 155 YICSIQNAQGNV--FQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS--PTQTWIRPDNDGKFGPD 228 (471)
Q Consensus 155 Y~C~~~~~~~~~--~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~--~~v~W~~~~~~~~~~~~ 228 (471)
|+|.+.|..+.. ......|.|.. ..+|.+.+.+.. ..+.+|+.++|.|.+ .+.|+ +.++|+|++..+.....
T Consensus 85 Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~-~~~~~g~~v~l~C~~-~g~~p~~~~v~W~k~g~~l~~~~~ 162 (523)
T 2rcj_C 85 YYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPS-SEELQANKATLVCLI-SDFYPGAVTVAWKADGSPVKAGVE 162 (523)
T ss_pred EEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCc-ccccCCCceEEEEEe-ccccCCceEEEEecCCCCCCCceE
Confidence 999999876531 22334555532 345666655543 345689999999999 45544 49999999987543321
Q ss_pred ce--------EEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEE----EeCCceeeCCCccEEecCCCcEEEEE
Q psy17058 229 VE--------VYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHV----LTLPAVTITPSEYVSVRPGEPLTLEC 296 (471)
Q Consensus 229 ~~--------~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V----~~~p~~~~~~~~~~~~~~g~~v~l~C 296 (471)
.. .....+.|.|.++..+|+|.|+|.+.|..+.....+.+.+ ..+|.+..... ...+.+|+.+.|.|
T Consensus 163 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~-~~~~~~G~~~~l~C 241 (523)
T 2rcj_C 163 TTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAP-SSKSTSGGTAALGC 241 (523)
T ss_pred eccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCC-CcccccCCceEEEE
Confidence 11 0111246999999999999999999998776555544422 23455543322 23567899999999
Q ss_pred EEeec-CCC-eEEEEeCCccCCCcc--cc----cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCC
Q psy17058 297 EATGR-PMP-TVSWVKYIAPFDRNL--ER----DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEY 368 (471)
Q Consensus 297 ~~~g~-p~~-~i~W~~~~~~~~~~~--~~----~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 368 (471)
.+.|. |.+ .+.|++++..+.... .. ......+.|.|.++..+| |.|+|.|.|..|.....+.|.+...
T Consensus 242 ~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~--- 317 (523)
T 2rcj_C 242 LVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSL--- 317 (523)
T ss_pred EEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcC---
Confidence 99886 877 899999998754211 00 011224589999999999 9999999999999877777766543
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCee-EEcCCeee-eeCCCeEEEEEEecccCC----c
Q psy17058 369 GPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRI-TLRPVRQT-VKPGDIANIRCSAIGATP----I 442 (471)
Q Consensus 369 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~-~~~~~~~~-~~~g~~~~l~C~~~g~p~----~ 442 (471)
|.+ ...+.... +.+|+.+.|.|.+.|.|+ +
T Consensus 318 --------------------------------------------P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~ 353 (523)
T 2rcj_C 318 --------------------------------------------PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQV 353 (523)
T ss_pred --------------------------------------------ceEEecCCCchhhcccCCceEEEEEEecccCCCCce
Confidence 343 33343333 788999999999999754 4
Q ss_pred eEEEecCCCCCCCc
Q psy17058 443 SIRWQPLQGYFPSH 456 (471)
Q Consensus 443 ~v~W~~~g~~l~~~ 456 (471)
.|+|+|||.+|...
T Consensus 354 ~v~W~k~g~~l~~~ 367 (523)
T 2rcj_C 354 KFNWYVDGVQVHNA 367 (523)
T ss_pred EEEEEECCeEccCC
Confidence 99999999988654
No 30
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=3.4e-37 Score=322.58 Aligned_cols=410 Identities=19% Similarity=0.281 Sum_probs=127.3
Q ss_pred eeeccceEEEEecCcEEEEEEeeeCCccEEEeccc---------------h---hhh---------heeeeeeeec----
Q psy17058 40 VSAENHEVTVYEGGDAELKCNTYYAPGRWMWLNFY---------------S---FLS---------LIIICLAYLS---- 88 (471)
Q Consensus 40 ~~~~~~~~~v~~g~~~~l~C~~~~~~~~~~w~~~~---------------~---~~~---------~~~~c~~~~~---- 88 (471)
+....+.+.+.+|+.++|.|.+.. ...|.|.... . .+. ..|.|.+...
T Consensus 34 l~~~~~~~~v~~G~~vtL~C~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~d~G~Y~C~~~~~~~~~ 112 (772)
T 3v2a_R 34 LSIQKDILTIKANTTLQITCRGQR-DLDWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLAS 112 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ECCCCCeEEEcCCCCEEEEEeccC-CeeeeCCCCCCccCCceeEEEcCCCcEEEEEEECCCcHhhCEeEEEEEcCCCEEE
Confidence 344556789999999999999763 2233332211 0 000 1257765311
Q ss_pred --------CCCCcE---EEcCCceeecCC--CcEEEEeeCCCCCCeEEEEeC--CCCCCCCCc----ccCcEEEEcCCCC
Q psy17058 89 --------PQANEV---QVTPRQQSAPEG--SQVTIECKSNDPSATIKWSKD--NQEQLPPNM----IAGETLIINGITK 149 (471)
Q Consensus 89 --------~~~~~v---~~~p~~~~v~~G--~~v~l~C~~~~p~~~v~W~~~--~~~~~~~~~----~~~~~L~i~~v~~ 149 (471)
+.+|.+ ...+..+.+.+| +.++|.|....|.+.+.|+++ ++....... .....|.|.+++.
T Consensus 113 ~~~v~v~~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 192 (772)
T 3v2a_R 113 VIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMI 192 (772)
T ss_dssp -------------------CEEEEEEESSCCCEEEECCCCSCSSCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGT
T ss_pred EEEEEECCCCCCceEcCcccceeEEEecCCCCeEEEEccCCCCCcEEEEEecCCCccccCCCceeecCCCCCeEecCCCh
Confidence 112222 122445678889 899999994447789999996 444443321 1567899999999
Q ss_pred CCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCC-CCCCeEEEEeCCCCCCcCCC
Q psy17058 150 ADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAG-EPSPTQTWIRPDNDGKFGPD 228 (471)
Q Consensus 150 ~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~-~p~~~v~W~~~~~~~~~~~~ 228 (471)
+|+|.|+|.+.+......+....+.+.....+.+.+.+.....+.+|+.++|.|.+... .+.+.+.|++++..+.....
T Consensus 193 ~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~ 272 (772)
T 3v2a_R 193 SYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKL 272 (772)
T ss_dssp TTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------C
T ss_pred hhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCcee
Confidence 99999999999764432222233444433445566666655678999999999999432 55679999999876433221
Q ss_pred c----------eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCC--CccEEecCCCcEEEEE
Q psy17058 229 V----------EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITP--SEYVSVRPGEPLTLEC 296 (471)
Q Consensus 229 ~----------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~--~~~~~~~~g~~v~l~C 296 (471)
. ......+.|.|.+++.+|+|.|+|.+.|..+..+..+.|.|..+|.+...+ .....+.+|+.+.|.|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C 352 (772)
T 3v2a_R 273 VNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPA 352 (772)
T ss_dssp EEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC-----------------------
T ss_pred eeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEE
Confidence 1 112235679999999999999999999998888888999999888766543 2235688999999999
Q ss_pred EEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCce--EEEEEEEEecCCCCCCCCCC
Q psy17058 297 EATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE--EKVITVAVEHRPEYGPISPR 374 (471)
Q Consensus 297 ~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~~p~~~~~~~~ 374 (471)
.+.|+|.+.+.|++++..+..... ......|.|.++..+|+|.|+|.|.|..|.. +..+.|.|..+|.+......
T Consensus 353 ~~~~~p~~~v~W~~~g~~l~~~~~---~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~ 429 (772)
T 3v2a_R 353 KYLGYPPPEIKWYKNGIPLESNHT---IKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLI 429 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeeeCCCeEEEEECCEeCCCCce---EccceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccC
Confidence 999999999999999988765332 2255889999999999999999999998865 45677777777654322110
Q ss_pred CCCccccC-----------------CCcccCC----C----------------------------------------CC-
Q psy17058 375 PGADILPD-----------------GDEYYRP----E----------------------------------------PE- 392 (471)
Q Consensus 375 ~~~~~~~~-----------------~~~w~~~----~----------------------------------------~~- 392 (471)
........ ...|... . .+
T Consensus 430 ~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 509 (772)
T 3v2a_R 430 SPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEG 509 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccC
Confidence 00000111 1256321 0 01
Q ss_pred -----CCceEEEcCCcceEEe----------------eecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCC
Q psy17058 393 -----EGEYVYAVGSNASISC----------------SVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQG 451 (471)
Q Consensus 393 -----~~~~~~~~~~~~~y~c----------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~ 451 (471)
..+.|.++.....|+| +..+|.+...+. ..+.+|+.+.|.|.+.|.|.+.++|+|+|.
T Consensus 510 ~~~~~~~L~i~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~~~p~-~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~ 588 (772)
T 3v2a_R 510 KNKTVSTLVIQAANVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPD-MQPTEQESVSLWCTADRSTFENLTWYKLGP 588 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceEEEEEEEeecccCeEEEEEEEccccccceeEEEEEECCceeeccCC-cccccCCceEEEEeccCCCCCCcEEEEcCC
Confidence 1124444422223999 555777766554 457899999999999999999999999997
Q ss_pred CCC
Q psy17058 452 YFP 454 (471)
Q Consensus 452 ~l~ 454 (471)
.+.
T Consensus 589 ~~~ 591 (772)
T 3v2a_R 589 QPL 591 (772)
T ss_dssp ---
T ss_pred ccc
Confidence 764
No 31
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.9e-35 Score=284.58 Aligned_cols=319 Identities=21% Similarity=0.347 Sum_probs=238.6
Q ss_pred cceeeeccceEEEEecCcEEEEEEeee--CCccEEEeccchhhh-------------------------heeeeeeeecC
Q psy17058 37 TQFVSAENHEVTVYEGGDAELKCNTYY--APGRWMWLNFYSFLS-------------------------LIIICLAYLSP 89 (471)
Q Consensus 37 ~~~~~~~~~~~~v~~g~~~~l~C~~~~--~~~~~~w~~~~~~~~-------------------------~~~~c~~~~~~ 89 (471)
++.+...+.++.+.+|+.++|.|.+.. +...+.|++++..+. ..|.|.+....
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 85 (395)
T 1bih_A 6 YPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPA 85 (395)
T ss_dssp CCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEETT
T ss_pred CCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeCC
Confidence 556667788999999999999999986 667899998654321 13688876321
Q ss_pred -----CCCcEEE--------cCCceeecCCCcEEEEee--CCCCCCeEEEEeCCC--CCC------CCCcc--cCcEEEE
Q psy17058 90 -----QANEVQV--------TPRQQSAPEGSQVTIECK--SNDPSATIKWSKDNQ--EQL------PPNMI--AGETLII 144 (471)
Q Consensus 90 -----~~~~v~~--------~p~~~~v~~G~~v~l~C~--~~~p~~~v~W~~~~~--~~~------~~~~~--~~~~L~i 144 (471)
....+.+ .|....+.+|+.+.|.|. .+.|.+.+.|++++. ... ..... ..+.|.|
T Consensus 86 g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 165 (395)
T 1bih_A 86 GVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYF 165 (395)
T ss_dssp EEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEE
T ss_pred CeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEE
Confidence 1111111 234567889999999999 577889999999841 111 11111 4568999
Q ss_pred cCCCCCCCe---EEEEEEEecCCceeeeeEEEEEeecc----------CCeeeecCCCceeEEcCCeEEEEEEccCCCCC
Q psy17058 145 NGITKADEG---VYICSIQNAQGNVFQDYASIQVDKRE----------MPRIRIHPNASQTFIVGDRADIQCVLEAGEPS 211 (471)
Q Consensus 145 ~~v~~~D~G---~Y~C~~~~~~~~~~~~~~~l~v~~~~----------~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~ 211 (471)
.+++.+|+| .|+|.+.|..+..........+.... .|.+ . .....+.+|+.++|.|.+ .+.|.
T Consensus 166 ~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~-~~~~~~~~G~~v~l~C~~-~g~p~ 241 (395)
T 1bih_A 166 TIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--V-SKDMMAKAGDVTMIYCMY-GSNPM 241 (395)
T ss_dssp EEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--E-CCSEEEETTSCEEEEEEE-ECSSC
T ss_pred EEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--c-CCceEEECCCcEEEEEEe-ccCCC
Confidence 999999999 99999999887622211111222111 1222 1 345578899999999999 78899
Q ss_pred CeEEEEeCCCCCCcCCCceEEe----eeceEEEeccCCCCCeEEEEEEEcCCCceEE-EEEEEEEeCCceeeCCCccEEe
Q psy17058 212 PTQTWIRPDNDGKFGPDVEVYQ----ELGVLRFNNIATGDEGKYTCIAENSAGKEVM-NAYIHVLTLPAVTITPSEYVSV 286 (471)
Q Consensus 212 ~~v~W~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~V~~~p~~~~~~~~~~~~ 286 (471)
+.+.|++++..+.......+.. .+..|.|.++..+|+|.|+|.+.|..+.... .+.|.|..+|.+...+.....+
T Consensus 242 ~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~ 321 (395)
T 1bih_A 242 GYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVV 321 (395)
T ss_dssp CCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEE
T ss_pred CeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEe
Confidence 9999999987755433322221 1237999999999999999999999888554 8899999999888776544688
Q ss_pred cCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 287 RPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 287 ~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
.+|+.+.|.|.+.|+|.+.+.|++++..+..... ....+.|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 322 ~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 322 KQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRA---TVTDSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp CTTSCEEEECEEEEESCCCCEEEETTEECCSSSE---EEETTEEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCeEEEEEEECcccCCeeEEEECCEECCCCce---EEECCEEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 9999999999999999999999999988764311 112349999999999999999999999999999998887
No 32
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=3.4e-35 Score=286.87 Aligned_cols=318 Identities=19% Similarity=0.323 Sum_probs=220.1
Q ss_pred cEEEcCCceeecCCCcEEEEee-CCCCC----CeEEEEeCC-CCCC--------------CCCcc-----cCcEEEEcCC
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECK-SNDPS----ATIKWSKDN-QEQL--------------PPNMI-----AGETLIINGI 147 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~-~~~p~----~~v~W~~~~-~~~~--------------~~~~~-----~~~~L~i~~v 147 (471)
.|...|..+.+.+|++++|.|. .+.+. +.+.|++++ +..+ ..+.. ....|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (438)
T 1qgc_4 3 VLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPV 82 (438)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSC
T ss_pred ceEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCC
Confidence 4666688899999999999999 66665 489999973 2211 11211 2348999999
Q ss_pred CCCCCeEEEEEEEecCCceeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCCCc
Q psy17058 148 TKADEGVYICSIQNAQGNVFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDGKF 225 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~~~ 225 (471)
+.+|+|.|+|.+.+..+........+.|... .+|.+.+.+... ...+|+.++|.|.+....|.+ .++|+|++..+..
T Consensus 83 ~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~ 161 (438)
T 1qgc_4 83 EADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 161 (438)
T ss_dssp CGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred cCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCCh-hhccCCceEEEEEEccccCCCcEEEEEECCEEcCC
Confidence 9999999999999877642344556666533 256665544332 234688999999995446776 9999999876433
Q ss_pred CC---------CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEE
Q psy17058 226 GP---------DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLEC 296 (471)
Q Consensus 226 ~~---------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C 296 (471)
.. ........+.|.|.++..+|+|.|+|.+.|..+.......+.+...+ +.+.......+.+|+++.|.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~G~~v~L~C 240 (438)
T 1qgc_4 162 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECE-VMLVESGGGLVKPGGSLKLSC 240 (438)
T ss_dssp TEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-C-CEEEEECCEEECTTCCEEEEE
T ss_pred CceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccce-eEEecCCceEEecCCcEEEEE
Confidence 20 00011124579999999999999999999987765333333221112 222222356789999999999
Q ss_pred EEeecC--CCeEEEEeC--CccCCC-------------------cccc--cccCceeEEEEeecCCCCCeEEEEEEEcCC
Q psy17058 297 EATGRP--MPTVSWVKY--IAPFDR-------------------NLER--DELTSRAVYTIASVRESDAGQYKCIGKNSA 351 (471)
Q Consensus 297 ~~~g~p--~~~i~W~~~--~~~~~~-------------------~~~~--~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 351 (471)
.+.|.| .+.+.|+++ +..+.. .... ........|.|.+++.+|+|.|+|.|.|..
T Consensus 241 ~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 320 (438)
T 1qgc_4 241 TASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDG 320 (438)
T ss_dssp EEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSS
T ss_pred EEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccC
Confidence 999988 569999997 433210 0000 011235689999999999999999999954
Q ss_pred C-----ceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeC
Q psy17058 352 G-----TEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKP 426 (471)
Q Consensus 352 g-----~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~ 426 (471)
+ .......|.|...+ ..+|.+...+....+.+
T Consensus 321 ~~~~~~~~~~~~~l~V~~~~-------------------------------------------~~~P~v~~~~~~~~~~~ 357 (438)
T 1qgc_4 321 GDEGFAYWGQGTVVTVSAAK-------------------------------------------TTPPSVYPLAPGSAAAA 357 (438)
T ss_dssp SCCCCCSBCCCEEEEECSSC-------------------------------------------CBCCEEEEECCCGGGCC
T ss_pred CCccceeeCCCEEEEEecCC-------------------------------------------CCCCeEEEcCccccccc
Confidence 4 22234567776432 12466665555556778
Q ss_pred CCeEEEEEEeccc-CCc-eEEEecCCCCCCC
Q psy17058 427 GDIANIRCSAIGA-TPI-SIRWQPLQGYFPS 455 (471)
Q Consensus 427 g~~~~l~C~~~g~-p~~-~v~W~~~g~~l~~ 455 (471)
|+.+.|.|.+.|. |.+ .|+|+|||.++..
T Consensus 358 g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~ 388 (438)
T 1qgc_4 358 ASMVTLGCLVKGYFPEPVTVTWNSGSLSSGV 388 (438)
T ss_dssp SSEEEEEEEEESCBSSCCEEEEGGGTCCSSE
T ss_pred CCcEEEEEEeccccCCCcEEEEecCCCCCce
Confidence 9999999999997 877 9999999999864
No 33
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=266.69 Aligned_cols=271 Identities=23% Similarity=0.406 Sum_probs=207.7
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-------cCcEEEEcCCCCCCCeEEEEEEEe
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-------AGETLIINGITKADEGVYICSIQN 161 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~~~ 161 (471)
.+|.+.+.|.++.+.+|+.+.|.|. .+.|. .+.|+++++..+..... ....|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 5789999999999999999999999 66664 89999954666544322 235899999999999999999999
Q ss_pred cCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC--CCceEEeeeceEE
Q psy17058 162 AQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG--PDVEVYQELGVLR 239 (471)
Q Consensus 162 ~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~l~ 239 (471)
..+.... ..+.|.+..+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+... .++... .++.|.
T Consensus 82 ~~g~~~~--~~~~l~v~~~~~~~~~~-~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~L~ 156 (291)
T 2wim_A 82 AKGQTQE--ATVVLEIYQKLTFREVV-SPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAML-ANNNLQ 156 (291)
T ss_dssp SSSCEEE--EEEEEEEECCCBCCSCC-CSEEEETTSCEEECCCC-BCSSCCEEEEECC----CBCCCSSEEEC-TTSCEE
T ss_pred ccCceEE--EEEEEEecCCcceEeCC-CChhhcCCCCEEEEEEE-ccCCCCEEEEEECCccccccCCceEEEc-cCCCEE
Confidence 8776333 34444444555544333 35578899999999999 77888999999998875532 233332 256799
Q ss_pred EeccCCCCCeEEEEEEEcCCCc--eEEEEEEEEEeCCceeeCCCc-cEEecCCCcEEEEEEEeecCCCeEEEEeCCccCC
Q psy17058 240 FNNIATGDEGKYTCIAENSAGK--EVMNAYIHVLTLPAVTITPSE-YVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFD 316 (471)
Q Consensus 240 i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~V~~~p~~~~~~~~-~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~ 316 (471)
|.+++..|+|.|+|.+.|..+. ....+.+.+..+|.+...+.. ...+.+|+.+.|.|.+.|+|.+.+.|++++..+.
T Consensus 157 i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~ 236 (291)
T 2wim_A 157 ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIE 236 (291)
T ss_dssp ETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECC
T ss_pred EEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECc
Confidence 9999999999999999988754 345667788888877654432 2367789999999999999999999999998876
Q ss_pred CcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 317 RNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 317 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
.............|.|.++..+|+|.|+|.|.|..|..+.++.|.|..++
T Consensus 237 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 237 ENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp CTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC----
T ss_pred CCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEec
Confidence 54433334456789999999999999999999999999999999998764
No 34
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=1.9e-35 Score=281.15 Aligned_cols=272 Identities=17% Similarity=0.219 Sum_probs=212.6
Q ss_pred ceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCC---------------CCCc--------ccCcEEEEcCCCCCCCeEE
Q psy17058 100 QQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQL---------------PPNM--------IAGETLIINGITKADEGVY 155 (471)
Q Consensus 100 ~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~---------------~~~~--------~~~~~L~i~~v~~~D~G~Y 155 (471)
.+.+.+|+++.|.|. .+.|.+.+.|++++...+ ..+. .....|.|.+++.+|+|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 457899999999999 788899999999943211 1111 0256799999999999999
Q ss_pred EEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeee
Q psy17058 156 ICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQEL 235 (471)
Q Consensus 156 ~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 235 (471)
+|.+.|.. ....|.|.. +...+. ..+.+|+.++|.|.+ .+.|.+.+.|++++..+ ....
T Consensus 83 ~C~~~n~~-----~~~~l~V~~-----~~~~~~--~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~--------~~~~ 141 (363)
T 1wio_A 83 ICEVEDQK-----EEVQLLVFG-----LTANSD--THLLQGQSLTLTLES-PPGSSPSVQCRSPRGKN--------IQGG 141 (363)
T ss_dssp EEEETTEE-----EEEEEEEEE-----EEESSC--SSEESBSCEEEEEEC-CTTCCCCEEEECSSSCE--------EEES
T ss_pred EEEEEECC-----CcEEEEEEe-----CCCCCc--eEEecCCCEEEEEEc-CCCCCCeEEEEcCCCcc--------cccc
Confidence 99998753 244555542 223332 367899999999999 66888999999987652 2346
Q ss_pred ceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEee-----cCCCeEEEEe
Q psy17058 236 GVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATG-----RPMPTVSWVK 310 (471)
Q Consensus 236 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-----~p~~~i~W~~ 310 (471)
..|.|.+++.+|+|.|+|.+.|..+.....+.|.|..+|... ....+.+|+.+.|.|.+.+ +|.+.+.|++
T Consensus 142 ~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~----~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~ 217 (363)
T 1wio_A 142 KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS----SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQA 217 (363)
T ss_dssp SEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSE----EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEE
T ss_pred eEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCC----CceEEecCCEEEEEEEEecccccCCCceeEEEec
Confidence 789999999999999999999887666777778887666543 3457889999999998887 7788999999
Q ss_pred CCccCCCc--------ccccc------------cCceeEEEEeecCCCCCeEEEEEEEcC--CCceEEEEEEEEecCCCC
Q psy17058 311 YIAPFDRN--------LERDE------------LTSRAVYTIASVRESDAGQYKCIGKNS--AGTEEKVITVAVEHRPEY 368 (471)
Q Consensus 311 ~~~~~~~~--------~~~~~------------~~~~~~l~i~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~V~~~p~~ 368 (471)
++..+... ..... ......|.|.+++.+|+|.|+|.|.|. .|..+..+.|.|...
T Consensus 218 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v--- 294 (363)
T 1wio_A 218 ERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRA--- 294 (363)
T ss_dssp SSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEE---
T ss_pred CCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEe---
Confidence 99876541 11000 122459999999999999999999999 998888888888531
Q ss_pred CCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCce--EEE
Q psy17058 369 GPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPIS--IRW 446 (471)
Q Consensus 369 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~--v~W 446 (471)
.|+.+.|.|.+.|.|+|. ++|
T Consensus 295 ---------------------------------------------------------~g~~~~l~C~~~g~p~p~~~i~W 317 (363)
T 1wio_A 295 ---------------------------------------------------------TQLQKNLTCEVWGPTSPKLMLSL 317 (363)
T ss_dssp ---------------------------------------------------------CCCSSSEEEEEESSCCTTCCEEE
T ss_pred ---------------------------------------------------------cCCCeeEEEEEccccCCCccEEE
Confidence 188899999999999988 999
Q ss_pred ecCCCCCCCc
Q psy17058 447 QPLQGYFPSH 456 (471)
Q Consensus 447 ~~~g~~l~~~ 456 (471)
+|||+.+..+
T Consensus 318 ~~~~~~~~~~ 327 (363)
T 1wio_A 318 KLENKEAKVS 327 (363)
T ss_dssp ECSSSSCSEE
T ss_pred EeCCCceeee
Confidence 9999998754
No 35
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=7.4e-35 Score=281.50 Aligned_cols=315 Identities=15% Similarity=0.139 Sum_probs=211.9
Q ss_pred eeccceEEEEecCcEEEEEEee-eCCccEEEeccchhhh-------------------------heeeeeeeecCC----
Q psy17058 41 SAENHEVTVYEGGDAELKCNTY-YAPGRWMWLNFYSFLS-------------------------LIIICLAYLSPQ---- 90 (471)
Q Consensus 41 ~~~~~~~~v~~g~~~~l~C~~~-~~~~~~~w~~~~~~~~-------------------------~~~~c~~~~~~~---- 90 (471)
+..+.++.|.+|+.++|.|.+. .+.+.+.|++....+. ..|.|.+.....
T Consensus 52 ~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~ 131 (423)
T 3qs7_E 52 VYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTI 131 (423)
T ss_dssp ----CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEE
T ss_pred eeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEE
Confidence 3344589999999999999998 4556889986542110 236787753211
Q ss_pred CCcEEEc-------CCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc--cCcEEEEcC-CCCCCCeEEEEEE
Q psy17058 91 ANEVQVT-------PRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI--AGETLIING-ITKADEGVYICSI 159 (471)
Q Consensus 91 ~~~v~~~-------p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~--~~~~L~i~~-v~~~D~G~Y~C~~ 159 (471)
...+.+. ..+..+..|+.+.|.|. .+.|.+.++|+++++ ....... ....+.... ++..|+|.|+|.|
T Consensus 132 ~~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~-~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A 210 (423)
T 3qs7_E 132 LFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDS-QGESCKEESPAVVKKEEKVLHELFGTDIRCCA 210 (423)
T ss_dssp EEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC--------------CEEECCSEECCCCSSCEEEEE
T ss_pred EEEEEEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEECCC-CCccccccccccccccceEEecccCeEEEEEE
Confidence 1112221 12234567888999999 899999999999844 3321100 111111111 1578999999999
Q ss_pred EecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCce--------E
Q psy17058 160 QNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVE--------V 231 (471)
Q Consensus 160 ~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~--------~ 231 (471)
.|..|.... ..+.|.+...|.. +.....+.+|+.++|.|.+....|.+.++|+|++..+....... .
T Consensus 211 ~N~~G~~~~--~~~~l~V~~~p~~---~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~ 285 (423)
T 3qs7_E 211 RNELGRECT--RLFTIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRT 285 (423)
T ss_dssp ECSSCEEEE--ECEEEESSSCCCS---STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTE
T ss_pred EcCCCCcce--eeEEEEEecCCcc---CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCce
Confidence 999886322 3344544444443 23356788999999999994337779999999998754332110 1
Q ss_pred EeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCC-ccEEecCCCcEEEEEEEeecCCCeEEEEe
Q psy17058 232 YQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPS-EYVSVRPGEPLTLECEATGRPMPTVSWVK 310 (471)
Q Consensus 232 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~-~~~~~~~g~~v~l~C~~~g~p~~~i~W~~ 310 (471)
....+.|.|.+++.+|+|.|+|.|.|. .+..+.|.|..+|.+.+.+. ....+.+|+++.|.|.+.|+|.|.+.|+|
T Consensus 286 ~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k 362 (423)
T 3qs7_E 286 MIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF 362 (423)
T ss_dssp EEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEE
T ss_pred eEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEE
Confidence 222457999999999999999999887 77788899999888776653 34567899999999999999999999999
Q ss_pred CCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 311 YIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
++..+..... .......+.+.....+|+|.|+|.|.|..|..+.++.|.|...|
T Consensus 363 ~g~~l~~~~~--~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p 416 (423)
T 3qs7_E 363 SRKSFPCEQK--GLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGT 416 (423)
T ss_dssp TTEEEECBCC--BCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-----
T ss_pred CCEECCCccc--cccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCC
Confidence 9988754321 01112233335667789999999999999999999999999876
No 36
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-34 Score=265.25 Aligned_cols=269 Identities=26% Similarity=0.495 Sum_probs=200.0
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCc-c-------cCcEEEEcCCCC-CCCeEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNM-I-------AGETLIINGITK-ADEGVYICS 158 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~-~-------~~~~L~i~~v~~-~D~G~Y~C~ 158 (471)
..+|.|...|.+..+.+|+++.|.|. .+.|.+.+.|+++ +..+.... . ....|.|.+++. +|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~-g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKK-GKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC--------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEEC-CEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 46889999999999999999999999 8889999999999 54443321 1 126899999998 999999999
Q ss_pred EEecCCceeeeeEEEEEeecc-----CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC---Cce
Q psy17058 159 IQNAQGNVFQDYASIQVDKRE-----MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP---DVE 230 (471)
Q Consensus 159 ~~~~~~~~~~~~~~l~v~~~~-----~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~---~~~ 230 (471)
+.|..+. ....+.|.|.... .|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+.... +..
T Consensus 83 a~n~~g~-~~~~~~l~V~~~~~~p~~~p~i~~~~-~~~~v~~g~~v~l~C~~-~g~p~~~v~W~k~~~~~~~~~~~~~~~ 159 (304)
T 2yd9_A 83 AQNSVGE-ITVHAKLTVLREDQLPSGFPNIDMGP-QLKVVERTRTATMLCAA-SGNPDPEITWFKDFLPVDPSASNGRIK 159 (304)
T ss_dssp EECSSCE-ECCEEEEEEECGGGCCTTCCEEEECC-CCEEEETTSCEEECCEE-ECSSCCEEEEEETTEECCGGGGTTSEE
T ss_pred EECCCCe-EEEEEEEEEeccccCCCCCCeeecCC-ccEEEeCCCeEEEEEEC-ccCCCCeEEEEECCEECcCCCCcceEE
Confidence 9998887 6666777776332 14554444 45568899999999999 788999999999987654332 222
Q ss_pred EEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEE-EEEEEE---eCCceeeCCCccEEecCCCcEEEEEEEeecCCCeE
Q psy17058 231 VYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMN-AYIHVL---TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTV 306 (471)
Q Consensus 231 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~V~---~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i 306 (471)
....+.|.|.+++.+|+|.|+|.+.|..+..... ..|.|. .+|.+...+. ...+.+|+.+.|.|.+.|+|.+.+
T Consensus 160 -~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~-~~~v~~G~~v~l~C~~~g~p~p~v 237 (304)
T 2yd9_A 160 -QLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPM-SHEIMPGGNVNITCVAVGSPMPYV 237 (304)
T ss_dssp -ECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCC-CBCCCTTCCEEEEEEEEEESCCEE
T ss_pred -eCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCC-ceEEcCCCeEEEEEEEeeeCCCEE
Confidence 2225689999999999999999999988765422 445553 4566655543 457889999999999999999999
Q ss_pred EEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCC
Q psy17058 307 SWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPE 367 (471)
Q Consensus 307 ~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 367 (471)
.|++++..+..... .......|.|.++ +|+|.|+|.|.|..|..+.++.|.|...+.
T Consensus 238 ~W~~~~~~l~~~~~--~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 294 (304)
T 2yd9_A 238 KWMQGAEDLTPEDD--MPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPK 294 (304)
T ss_dssp EEEETTEECSCSSS--CCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC------
T ss_pred EEEECCEECCCccc--ccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCcc
Confidence 99999988764432 1233445666655 699999999999999999999999988763
No 37
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=2.2e-34 Score=282.11 Aligned_cols=307 Identities=17% Similarity=0.199 Sum_probs=210.1
Q ss_pred cEEEcCCceeecCCCcEEEEee-CCCCCCeE-----EEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCce
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECK-SNDPSATI-----KWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNV 166 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v-----~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 166 (471)
+|.+.|.+..+.+|++++|.|. .+ |.+.+ .|+|+ +..+... ....|.|.+++. |+| |+|.+.+..+.
T Consensus 1 ~i~~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~-~~~~~~~--~~~~l~i~~v~~-d~g-Y~C~a~~~~~~- 73 (450)
T 1z7z_I 1 QTSVSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKK-ELLLPGN--NRKVYELSNVQE-DSQ-PMCYSNCPDGQ- 73 (450)
T ss_dssp CCEEESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEE-ECCSSTT--TEEEEEEEEECS-CBC-CEEEEEETTEE-
T ss_pred CcccCCCceEEecCCcEEEEEEccC-CCcccccccceeeec-ceEecCC--CceEEEEEeccc-CCe-eEEEEeCCCCc-
Confidence 3678899999999999999999 56 88888 99998 4433221 234899999987 999 99999765443
Q ss_pred eeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC---eEEEEeCCCCCCcCCCceEEeeeceEEEecc
Q psy17058 167 FQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP---TQTWIRPDNDGKFGPDVEVYQELGVLRFNNI 243 (471)
Q Consensus 167 ~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~---~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~ 243 (471)
.+..+.|.|. .+|......+....+.+|+.++|.|.+ .+.|.+ .++|+|++..+....... ....+.|.|.++
T Consensus 74 ~~~~~~l~V~--~~P~~~~~~~~~~~v~~G~~v~L~C~~-~g~~~~~~~~v~W~k~g~~l~~~~~~~-~~~~~~L~i~~~ 149 (450)
T 1z7z_I 74 STAKTFLTVY--WTPERVELAPLPSWQPVGKNLTLRCQV-EGGAPRANLTVVLLRGEKELKREPAVG-EPAEVTTTVLVR 149 (450)
T ss_dssp EEEECEEEEE--BCCSEEEECCCCSEECTTSEEEEEEEE-ECCBCGGGEEEEEEETTEEEEEEECCT-TTEEEEEEEECC
T ss_pred ceeEEEEEEE--eCCCcceecCCCceEeeCCeEEEEEEe-cCCCCCcCcEEEEeeCCEEeecccccc-cccceEEEEEee
Confidence 4445555555 456555443444578899999999999 666666 999999987644322111 122458999999
Q ss_pred CCCCCeEEEEEEEcCCCceE--------EEEEEEEEeC----CceeeCCCccEEecCCCcEEEEEEEeec-C--CCeEEE
Q psy17058 244 ATGDEGKYTCIAENSAGKEV--------MNAYIHVLTL----PAVTITPSEYVSVRPGEPLTLECEATGR-P--MPTVSW 308 (471)
Q Consensus 244 ~~~d~G~Y~C~~~~~~~~~~--------~~~~l~V~~~----p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p--~~~i~W 308 (471)
..+|+|.|+|.+.|..+... ....|.|... |.+.. ...+.+|+.+.|.|.+.|. | .+.+.|
T Consensus 150 ~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~----~~~v~~G~~v~l~C~~~g~~P~~~~~~~W 225 (450)
T 1z7z_I 150 RDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS----PRVLEVDTQGTVVCSLDGLFPVSEAQVHL 225 (450)
T ss_dssp SSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEEC----CSEEETTSEEEEEEEEESCTTGGGCEEEE
T ss_pred ccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecC----ceeEEeCCcEEEEEEeeCCCCCCceEEEE
Confidence 99999999999999865421 2234445433 21111 1478899999999999998 7 679999
Q ss_pred EeCCccCCCcccccccCceeEEE-EeecCCCCCe--EEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCc
Q psy17058 309 VKYIAPFDRNLERDELTSRAVYT-IASVRESDAG--QYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDE 385 (471)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~l~-i~~~~~~d~G--~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~ 385 (471)
++++..+..... .......+. ..+++.+|+| .|+|.|.|..|.....+.|.|...|
T Consensus 226 ~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~------------------- 284 (450)
T 1z7z_I 226 ALGDQRLNPTVT--YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP------------------- 284 (450)
T ss_dssp EETTEECCCEEE--EETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCC-------------------
T ss_pred eCCCEeCCceEE--ecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCC-------------------
Confidence 999988765322 111121211 2267899999 9999999999999889999998764
Q ss_pred ccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEEecCeEE
Q psy17058 386 YYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVEYNGELR 465 (471)
Q Consensus 386 w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~~~~~l~ 465 (471)
+|.|... ...+.+|+.+.|.|.+. |.|.++| ||.++.... ...+|.
T Consensus 285 --------------------------~p~i~~~--~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~~~--~~~~L~ 330 (450)
T 1z7z_I 285 --------------------------APNVILT--KPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG--PRAQLL 330 (450)
T ss_dssp --------------------------CCEEEES--CSEEETTCEEEEEEEC--------------------C--CCCCEE
T ss_pred --------------------------CCeEecC--CeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCCCC--ceEEEE
Confidence 5777654 45899999999999998 8899999 888883211 234566
Q ss_pred ECCC
Q psy17058 466 LGPH 469 (471)
Q Consensus 466 i~~~ 469 (471)
|.++
T Consensus 331 i~~~ 334 (450)
T 1z7z_I 331 LKAT 334 (450)
T ss_dssp EECC
T ss_pred EecC
Confidence 6554
No 38
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=8.1e-33 Score=280.13 Aligned_cols=300 Identities=16% Similarity=0.246 Sum_probs=219.0
Q ss_pred cCCceeecCCCcEEEEee-CCCCC---CeEEEEeCCCCCC---------------CCCcc-------cCcEEEEcCCCCC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDPS---ATIKWSKDNQEQL---------------PPNMI-------AGETLIINGITKA 150 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p~---~~v~W~~~~~~~~---------------~~~~~-------~~~~L~i~~v~~~ 150 (471)
.|..+.+.+|+++.|.|. .+.+. ..+.|+|++.... ..+.. ....|+|.+++.+
T Consensus 6 ~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~ 85 (585)
T 2ocw_A 6 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQD 85 (585)
T ss_pred CcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcc
Confidence 466788999999999999 55543 3899999943210 11111 1247999999999
Q ss_pred CCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC------
Q psy17058 151 DEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK------ 224 (471)
Q Consensus 151 D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~------ 224 (471)
|+|.|+|.+.+..+. .... +.|.+..+|.+... .....+.+|+.++|.|.+..+.+.+.+.|+|++....
T Consensus 86 D~G~Y~C~~~n~~~~-~~~~--~~l~V~~~p~~~~~-~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~ 161 (585)
T 2ocw_A 86 DSGRYKCGLGINSRG-LSFD--VSLEVSQGPGLLND-TKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDS 161 (585)
T ss_pred cCEEEEEEcccCCCC-ceEE--EEEEEecCccccCC-CccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecC
Confidence 999999999987766 4444 44444466665443 4456788999999999995455667899999876522
Q ss_pred -------cCCCceEEeeec-----eEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcE
Q psy17058 225 -------FGPDVEVYQELG-----VLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPL 292 (471)
Q Consensus 225 -------~~~~~~~~~~~~-----~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v 292 (471)
...+..+...+. .|.|.+++.+|+|.|+|.+.|..+.....+.|.|..++ +..+.+.+|+.+
T Consensus 162 ~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~------p~~~~~~~G~~v 235 (585)
T 2ocw_A 162 SGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE------PELVYEDLRGSV 235 (585)
T ss_pred CcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC------CceeEEcCCCcE
Confidence 123344433222 79999999999999999999998888888888887643 223467899999
Q ss_pred EEEEEEeecCC---CeEEEE-eCCccCC--------------Ccccccc--cCceeEEEEeecCCCCCeEEEEEEEcCCC
Q psy17058 293 TLECEATGRPM---PTVSWV-KYIAPFD--------------RNLERDE--LTSRAVYTIASVRESDAGQYKCIGKNSAG 352 (471)
Q Consensus 293 ~l~C~~~g~p~---~~i~W~-~~~~~~~--------------~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 352 (471)
.|.|.+ +.|. +.+.|+ +++.... ....... .....+|.|.+++.+|+|.|+|.|.|..+
T Consensus 236 ~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~ 314 (585)
T 2ocw_A 236 TFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQ 314 (585)
T ss_pred EEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCC
Confidence 999997 4444 578896 7774221 0000000 12223899999999999999999999643
Q ss_pred ceE----EEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCC
Q psy17058 353 TEE----KVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGD 428 (471)
Q Consensus 353 ~~~----~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~ 428 (471)
... ..+.|.|..+ |.+...+....+.+|+
T Consensus 315 ~~~~~~~~~~~l~V~~~-----------------------------------------------p~~~~~~~~~~~~~G~ 347 (585)
T 2ocw_A 315 LQEGSPIQAWQLFVNEE-----------------------------------------------STIPRSPTVVKGVAGS 347 (585)
T ss_pred ccccCceeeEEEEEecc-----------------------------------------------cccccCCcceEEEeCC
Confidence 332 7788888765 5666667778899999
Q ss_pred eEEEEEEecccCCceE----EEec--CCC--CCC
Q psy17058 429 IANIRCSAIGATPISI----RWQP--LQG--YFP 454 (471)
Q Consensus 429 ~~~l~C~~~g~p~~~v----~W~~--~g~--~l~ 454 (471)
.+.|.|.+.|.|.+.+ +|+| ||. .|.
T Consensus 348 ~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~ 381 (585)
T 2ocw_A 348 SVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLV 381 (585)
T ss_pred cEEEEEecCCCCCccEEEEEEEEccCCCCCceee
Confidence 9999999999999977 8999 997 553
No 39
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=100.00 E-value=4.2e-33 Score=256.48 Aligned_cols=262 Identities=15% Similarity=0.226 Sum_probs=197.0
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCcee
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNVF 167 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~ 167 (471)
..+|.|...+....+.+|++++|.|. .+ .+.|+++ +..+......+..|.|.+++.+|+|.|+|.+.| +.
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n--g~-- 80 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFK-TYFNEMVENKKNEWIQEKAEATRTGTYTCSNSN--GL-- 80 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEE-CSSSCEEEECSSEEEETTCCGGGCEEEEEEESS--SC--
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecC-CcceeeecCCCceEEEeccCHHhCeEEEEEeeC--Cc--
Confidence 46788888888999999999999999 54 8999999 544421122458999999999999999999998 32
Q ss_pred eeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEE-eCCCCCCcCCCceEEeeeceEEEeccCC
Q psy17058 168 QDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWI-RPDNDGKFGPDVEVYQELGVLRFNNIAT 245 (471)
Q Consensus 168 ~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 245 (471)
.....|.|. .+|.... ......+.+|+.++|.|.+ .+ |. +.+.|+ +++..+....++.... ...|.|.+++.
T Consensus 81 ~~~~~l~V~--~~~~~~~-~~~~~~~~~g~~v~l~C~~-~~-p~~~~v~W~~~~g~~l~~~~~~~~~~-~~~L~i~~v~~ 154 (290)
T 2o26_X 81 TSSIYVFVR--DPAKLFL-VGLPLFGKEDSDALVRCPL-TD-PQVSQYSLIECDGKSLPTDLTFVPNP-KAGITIKNVKR 154 (290)
T ss_dssp EEEEEEEEE--CSSCCBC-CCCCEEEETTSCEEECCCB-SC-CSCEEEEEEETTSCCCCTTCEEEEET-TTEEEEESCCG
T ss_pred cEEEEEEEe--CCCcccc-cccceEEecCCeEEEeCcC-CC-CCCceEEEEeCCCcCCCCCCceeeCC-CCCEEEecccH
Confidence 344455554 4555443 3445678899999999999 44 77 899995 6776654444333333 56899999999
Q ss_pred CCCe-EEEEEEEcCCCce-EEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEeecCCCe-EEEEeCCccC---
Q psy17058 246 GDEG-KYTCIAENSAGKE-VMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPT-VSWVKYIAPF--- 315 (471)
Q Consensus 246 ~d~G-~Y~C~~~~~~~~~-~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~-i~W~~~~~~~--- 315 (471)
+|+| .|+|.+.|..+.. +..+.|.|. .+|.+...+.. ..+.+|+.+.|.|.+.|.|.+. +.|++++..+
T Consensus 155 ~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~-~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~ 233 (290)
T 2o26_X 155 AYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETS-HLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHI 233 (290)
T ss_dssp GGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSB-CCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEEC
T ss_pred HHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCc-ceEecCCcEEEEEEEecCCcceeEEEecCCCCCccc
Confidence 9999 9999999985442 335777776 56777666543 4788999999999999999996 9999998873
Q ss_pred -CCccc-----ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 316 -DRNLE-----RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 316 -~~~~~-----~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
..... .......+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 234 AQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp CCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred eeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 21111 0123456789999999999999999999999999999999988754
No 40
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=3.9e-33 Score=272.62 Aligned_cols=315 Identities=14% Similarity=0.198 Sum_probs=211.0
Q ss_pred cCCceeecCCCcEEEEee-CCCC--CCeEEEEeCC-CCCC-------------------CCCcc-------cCcEEEEcC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDN-QEQL-------------------PPNMI-------AGETLIING 146 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~-~~~~-------------------~~~~~-------~~~~L~i~~ 146 (471)
+|..+.+.+|++++|.|. .+.+ .+.+.|+|+. +..+ ..+.. ....|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (444)
T 1igt_B 6 ESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSR 85 (444)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECC
Confidence 456778999999999999 5543 5789999863 2111 11111 135899999
Q ss_pred CCCCCCeEEEEEEEecCCc--eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCC
Q psy17058 147 ITKADEGVYICSIQNAQGN--VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDN 221 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~ 221 (471)
++.+|+|.|+|.+.+..+. .......|.|.. ..+|.+....+.. .+.+|+.++|.|.+....|.+ .++|++++.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 164 (444)
T 1igt_B 86 LKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVC-GDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL 164 (444)
T ss_dssp CCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCS-SCCCSSCEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccc-cCCCCCcEEEEEEEcceeCCCcEEEEecCCC
Confidence 9999999999999987543 122334555542 2245554433322 347899999999995445766 999999987
Q ss_pred CCCcCCCc-----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEE------------------EeCCceee
Q psy17058 222 DGKFGPDV-----EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHV------------------LTLPAVTI 278 (471)
Q Consensus 222 ~~~~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V------------------~~~p~~~~ 278 (471)
.+...... ......+.|.|.++..+| |.|+|.+.|..+.......+.+ ..+|.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~ 243 (444)
T 1igt_B 165 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFI 243 (444)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEE
T ss_pred CCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEe
Confidence 63211100 112224568999999889 9999999999887655444432 12444434
Q ss_pred CCCccEE-ecCCCcEEEEEEEeecC---C-CeEEEEeCCccCCCcccc-------cccCceeEEEEeecCCCCCeEEEEE
Q psy17058 279 TPSEYVS-VRPGEPLTLECEATGRP---M-PTVSWVKYIAPFDRNLER-------DELTSRAVYTIASVRESDAGQYKCI 346 (471)
Q Consensus 279 ~~~~~~~-~~~g~~v~l~C~~~g~p---~-~~i~W~~~~~~~~~~~~~-------~~~~~~~~l~i~~~~~~d~G~Y~C~ 346 (471)
.++.... +.+|+++.|.|.+.|.+ + +.+.|++++..+...... ......+.|.|.+++.+|+|.|+|.
T Consensus 244 ~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~ 323 (444)
T 1igt_B 244 FPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCK 323 (444)
T ss_dssp ECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEE
T ss_pred cCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEE
Confidence 3332222 58899999999999984 3 599999999876532110 0112356899999999999999999
Q ss_pred EEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeC
Q psy17058 347 GKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKP 426 (471)
Q Consensus 347 a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~ 426 (471)
|.|..|.......+.+... +..+|.+.+.+.......
T Consensus 324 a~n~~~~~~~~~~v~~~~~-------------------------------------------~~~~P~v~~~~~~~~~~~ 360 (444)
T 1igt_B 324 VNNKDLPAPIERTISKPKG-------------------------------------------SVRAPQVYVLPPPEEEMT 360 (444)
T ss_dssp EECTTCSSCEEEEEECCCC-------------------------------------------CCBCCEEEEECCCGGGTT
T ss_pred EEcCCCCCceEEEEeccCC-------------------------------------------CCCCCEEEEeCCChHHcc
Confidence 9999987743333322111 013578776554432233
Q ss_pred CCeEEEEEEecc-cCCc-eEEEecCCCCCCCc
Q psy17058 427 GDIANIRCSAIG-ATPI-SIRWQPLQGYFPSH 456 (471)
Q Consensus 427 g~~~~l~C~~~g-~p~~-~v~W~~~g~~l~~~ 456 (471)
+..+.|.|.+.| .|++ .|+|+|||.++...
T Consensus 361 ~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 392 (444)
T 1igt_B 361 KKQVTLTCMVTDFMPEDIYVEWTNNGKTELNY 392 (444)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEECSSE
T ss_pred CCeEEEEEEEEeeeCCCCEEEEEECCEEcccc
Confidence 445999999998 4555 99999999988543
No 41
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=263.39 Aligned_cols=271 Identities=20% Similarity=0.266 Sum_probs=200.3
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCC-CCCeEEEEeCCCCCCCCCcc-----cCcEEEEcCCCCCCCeEEEEEEEe
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SND-PSATIKWSKDNQEQLPPNMI-----AGETLIINGITKADEGVYICSIQN 161 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~-p~~~v~W~~~~~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~~~~ 161 (471)
..+|.+. .|.+..+.+|+++.|.|. .+. |.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.+.|
T Consensus 5 ~~~P~~~-~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 82 (317)
T 2y25_A 5 FTGPHFV-EYLSWEVTGECNVLLKCKVANIKKETHIVWYKD-EREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKD 82 (317)
T ss_dssp SSCCEEE-EEEEEEEETTTEEEEEEEEESCCTTCEEEEEET-TEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEES
T ss_pred cCCCcEe-eeeeEEECCCCeEEEEEEEcCCCCCCEEEEEEC-CeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEEC
Confidence 3567776 455689999999999999 555 7899999999 554443221 446999999999999999999999
Q ss_pred cCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEc---------cCCCCCCeEEEEeCCCCCCcCCCceEE
Q psy17058 162 AQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVL---------EAGEPSPTQTWIRPDNDGKFGPDVEVY 232 (471)
Q Consensus 162 ~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~---------~~~~p~~~v~W~~~~~~~~~~~~~~~~ 232 (471)
..+. .. ..+.|.+...|.+...+ ....+.+|+.+.|.|.+ ..+.|.+.+.|++++..+....++.+.
T Consensus 83 ~~g~-~~--~~~~l~v~~~~~~~~~~-~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 158 (317)
T 2y25_A 83 DRGK-DK--SRLKLVDEAFKELMMEV-CKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTG 158 (317)
T ss_dssp SSCE-EE--EEECCSTHHHHHHHHHH-HHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEE
T ss_pred CCCc-EE--EEEEEEEecCccccccC-CceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEe
Confidence 8775 33 33444433333221111 11233455666666655 223788999999999887666665554
Q ss_pred eee--ceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEe--------------------CCceeeCCCccEEecCCC
Q psy17058 233 QEL--GVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLT--------------------LPAVTITPSEYVSVRPGE 290 (471)
Q Consensus 233 ~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~--------------------~p~~~~~~~~~~~~~~g~ 290 (471)
..+ ..|.|.+++.+|+|.|+|.+.|..+....++.|.+.. .|.+.........+.+|+
T Consensus 159 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~ 238 (317)
T 2y25_A 159 VTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGK 238 (317)
T ss_dssp ECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTS
T ss_pred ccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCC
Confidence 433 3499999999999999999999888887777776531 244444444456889999
Q ss_pred cEEEEEEEeecCCCeEEEEeCCccCCCccccccc---CceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecC
Q psy17058 291 PLTLECEATGRPMPTVSWVKYIAPFDRNLERDEL---TSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 291 ~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 365 (471)
.+.|.|.+.|+|.+.+.|++++..+......... .....|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 239 ~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 239 ALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp BBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEcC
Confidence 9999999999999999999999887643221111 33469999999999999999999999999999999998753
No 42
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=100.00 E-value=1e-32 Score=253.66 Aligned_cols=267 Identities=16% Similarity=0.221 Sum_probs=197.5
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCc-ccCcEEEEcCCCCCCCeEEEEEEEecCCcee
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNM-IAGETLIINGITKADEGVYICSIQNAQGNVF 167 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~ 167 (471)
++|.+...+....+.+|++++|.|. .+ .+.|++++........ .....|.|.+++.+|+|.|+|.+.+..+. .
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~ 77 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMA-G 77 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC------
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCc-c
Confidence 5677888888899999999999999 44 4999988432221111 15679999999999999999999887766 5
Q ss_pred eeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEe-CCCCCCcCCCceEEeeeceEEEeccCC
Q psy17058 168 QDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIR-PDNDGKFGPDVEVYQELGVLRFNNIAT 245 (471)
Q Consensus 168 ~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~ 245 (471)
.....|.|. .+|...........+.+|+.++|.|.+ .+.+.+ .+.|++ ++..+....++.+.. .+.|.|.+++.
T Consensus 78 ~~~~~l~V~--~~~~~~~~~~~~~~v~~g~~v~L~C~~-~~~~~~~~v~W~~~~~~~~~~~~~~~~~~-~~~L~i~~v~~ 153 (289)
T 3ejj_X 78 STTIHLYVK--DPAHSWNLLAQEVTVVEGQEAVLPCLI-TDPALKDSVSLMREGGRQVLRKTVYFFSP-WRGFIIRKAKV 153 (289)
T ss_dssp CEEEEEEEC--CSSCSEEESCSEEEEETTSCEEECEEE-SCGGGGGSEEEEEGGGEECCTTCCEEEET-TTEEEESSCCG
T ss_pred eeEEEEEEe--CCCcceecccceEEEecCCceEeEEEc-cCCCcceEEEEEecCCeecCCCccEEECC-CCCEEEeeccc
Confidence 555555555 444433333456678899999999999 455544 499986 444433344444433 67899999999
Q ss_pred CCCeEEEEEEE-cCCCceEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEee-cCCCeEEEEeCCccCCCcc
Q psy17058 246 GDEGKYTCIAE-NSAGKEVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATG-RPMPTVSWVKYIAPFDRNL 319 (471)
Q Consensus 246 ~d~G~Y~C~~~-~~~~~~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~~i~W~~~~~~~~~~~ 319 (471)
+|+|.|+|.+. +..+..+..+.|.|. .+|.+...+. ...+.+|+++.|.|.+.+ .|.+.+.|++++..+....
T Consensus 154 ~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~ 232 (289)
T 3ejj_X 154 LDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPS-KLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPL 232 (289)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESS-SEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCE
T ss_pred ccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCC-ceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccC
Confidence 99999999999 444455667788888 5676766654 456689999999999998 7889999999998875432
Q ss_pred c----ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 320 E----RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 320 ~----~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
. .......+.|.|.+++.+|+|.|+|.|.|..|..+.++.|.+.+.+
T Consensus 233 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 233 NSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp EEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC---
T ss_pred CcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecc
Confidence 1 1223346789999999999999999999999999999999988765
No 43
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=100.00 E-value=1.6e-32 Score=255.49 Aligned_cols=266 Identities=19% Similarity=0.263 Sum_probs=199.4
Q ss_pred EEEcCCceeecCCCcEEEEee-CCCCCC-----eEEEEeCCCCCC------------CC--Cc----------ccCcEEE
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SNDPSA-----TIKWSKDNQEQL------------PP--NM----------IAGETLI 143 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~~p~~-----~v~W~~~~~~~~------------~~--~~----------~~~~~L~ 143 (471)
+...|.++.+..|++++|.|. .+.+.+ .+.|+|++.... .. +. ..+.+|+
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 344577888999999999999 544433 489999843211 00 00 0235799
Q ss_pred EcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCC
Q psy17058 144 INGITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDG 223 (471)
Q Consensus 144 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~ 223 (471)
|.+++.+|+|.|+|.+.+...... ...+.|.+...|....... ...+..|+.+.+.|.+..+.|.+.+.|++++..+
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~--~~~~~l~v~~~P~~~~~~~-~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~ 159 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSR--SVDIWLRVLAKPQNTAEVQ-KVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGM 159 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEE--EEEEEECCBBCCEEEEEEC-CBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCE
T ss_pred ECcCChhhCEEEEEEEeeccCcce--eeeeeeeeccCCcceeccc-ceEeecCceEEEEEEccCccCCcEEEeecCCccc
Confidence 999999999999999865443323 3445555556666655443 2345678899999988678899999999998875
Q ss_pred CcCCCceE-----EeeeceEEEeccCCCCCeEEEEEEEcCCCc--eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEE
Q psy17058 224 KFGPDVEV-----YQELGVLRFNNIATGDEGKYTCIAENSAGK--EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLEC 296 (471)
Q Consensus 224 ~~~~~~~~-----~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C 296 (471)
........ ....+.|.|.....+|+|.|+|.+.|..+. ....+.|.|.++|.+.+.+.....+.+|+.+.|.|
T Consensus 160 ~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C 239 (313)
T 4fqp_A 160 PNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTC 239 (313)
T ss_dssp EEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEE
T ss_pred cccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEE
Confidence 43221111 111345889999999999999999997655 45566777888888877666566788899999999
Q ss_pred EEeecCCC-eEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 297 EATGRPMP-TVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 297 ~~~g~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
.+.|+|.| .|.|++++..+..... ....+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.+.|
T Consensus 240 ~~~g~P~p~~v~W~~~~~~l~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 306 (313)
T 4fqp_A 240 DARSNPEPTGYNWSTTMGPLPPFAV----AQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGP 306 (313)
T ss_dssp EEEEESCCCEEEEEETTBSCCTTEE----EETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred EecCCCCCcEEEEEECCEECCCceE----EeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCC
Confidence 99999998 6999999988764422 234689999999999999999999999999999999999775
No 44
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=261.26 Aligned_cols=264 Identities=17% Similarity=0.256 Sum_probs=196.9
Q ss_pred CceeecCCCcEEEEee-C-CCCCCeEEEEeCCCCCCC------------------CCc------ccCcEEEEcCCCCCCC
Q psy17058 99 RQQSAPEGSQVTIECK-S-NDPSATIKWSKDNQEQLP------------------PNM------IAGETLIINGITKADE 152 (471)
Q Consensus 99 ~~~~v~~G~~v~l~C~-~-~~p~~~v~W~~~~~~~~~------------------~~~------~~~~~L~i~~v~~~D~ 152 (471)
+.+++.+|++++|.|. . +.+.+.+.|+|+++.... .+. ....+|.|.+++.+|+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 3678899999999998 3 445567999997432110 000 0345799999999999
Q ss_pred eEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCc---
Q psy17058 153 GVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDV--- 229 (471)
Q Consensus 153 G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~--- 229 (471)
|.|+|.+.+...........+.+.+...+.. ...........|+.+.|.|.+..+.|.+.++|++++..+......
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~ 165 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPTVSL-IKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPN 165 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCEEEE-EECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTT
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeecccccc-ccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeee
Confidence 9999999886544344455555553322222 222333345578999999987678999999999998875332110
Q ss_pred eEEeeeceEEEeccCCCCCeEEEEEEEcCCCc--eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCC-eE
Q psy17058 230 EVYQELGVLRFNNIATGDEGKYTCIAENSAGK--EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMP-TV 306 (471)
Q Consensus 230 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~i 306 (471)
......+.|.|..+...|.|.|+|.+.|..+. .+.++.|.|..+|.+.+.+.....+..|+.+.|.|.+.|+|.| .+
T Consensus 166 ~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v 245 (308)
T 4fom_A 166 ETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKS 245 (308)
T ss_dssp SCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEE
T ss_pred ecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEE
Confidence 11112456999999999999999999997665 4556677788888877766656678889999999999999988 69
Q ss_pred EEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 307 SWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 307 ~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
.|+|++..+..... ......|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.++|
T Consensus 246 ~W~k~~~~~~~~~~---~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P 302 (308)
T 4fom_A 246 VWSRLDGQWPDGLL---ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPP 302 (308)
T ss_dssp ECCBSSSCCCSSCB---CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC
T ss_pred EEEECCeECCCcEE---EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCC
Confidence 99999988764432 3345667789999999999999999999999999999999887
No 45
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=100.00 E-value=2e-33 Score=264.07 Aligned_cols=270 Identities=20% Similarity=0.327 Sum_probs=140.2
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCC-CCCeEEEEeCCCCCCCCCcc---cCcEEEEcCCCCCCCeEEEEEEEecCCce
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SND-PSATIKWSKDNQEQLPPNMI---AGETLIINGITKADEGVYICSIQNAQGNV 166 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~-p~~~v~W~~~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 166 (471)
|.+.. |....+.+|+++.|.|. .+. |.+.+.|+++ +..+..... .++.|.|.+++.+|+|.|+|.+.|. +.
T Consensus 10 p~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~-g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~- 85 (334)
T 1ry7_B 10 PEPGQ-QEQLVFGSGDAVELSCPPPGGGPMGPTVWVKD-GTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QR- 85 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCC-cCcEEEecCCcEEEEeeCCCCCCCcceEEEEC-CeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-Ce-
Confidence 34433 77889999999999999 544 6789999999 555543222 5678999999999999999999987 54
Q ss_pred eeeeEEEEEeecc--------------------CCeeeec---CCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCC
Q psy17058 167 FQDYASIQVDKRE--------------------MPRIRIH---PNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDG 223 (471)
Q Consensus 167 ~~~~~~l~v~~~~--------------------~p~~~~~---~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~ 223 (471)
......|.|.... +|.+... ......+.+|+.++|.|.+ .+.|.+.+.|++++..+
T Consensus 86 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~-~g~p~~~v~W~~~~~~~ 164 (334)
T 1ry7_B 86 VLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPA-AGNPTPSISWLKNGREF 164 (334)
T ss_dssp ---------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCC-CCSSCCEEECCBTTBCC
T ss_pred EEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEc-cCCCCCeEEEEECCEEC
Confidence 4445555554221 1222111 0122467899999999999 77888999999998876
Q ss_pred CcCCCc---eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeC----CceeeCCCccEEecCCCcEEEEE
Q psy17058 224 KFGPDV---EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTL----PAVTITPSEYVSVRPGEPLTLEC 296 (471)
Q Consensus 224 ~~~~~~---~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~----p~~~~~~~~~~~~~~g~~v~l~C 296 (471)
....+. ........|.|.+++.+|+|.|+|.+.|..+.....+.|.|... |.+.........+.+|+.+.|.|
T Consensus 165 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C 244 (334)
T 1ry7_B 165 RGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHC 244 (334)
T ss_dssp CTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECC
T ss_pred cccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEE
Confidence 544332 22223558999999999999999999999888888888998863 33333333456889999999999
Q ss_pred EEeecCCCeEEEEe----CCccCCCccc----cc-------ccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy17058 297 EATGRPMPTVSWVK----YIAPFDRNLE----RD-------ELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVA 361 (471)
Q Consensus 297 ~~~g~p~~~i~W~~----~~~~~~~~~~----~~-------~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 361 (471)
.+.|+|.+.+.|++ ++..+..... .. .......|.|.+++.+|+|.|+|.|.|..|....++.|.
T Consensus 245 ~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 324 (334)
T 1ry7_B 245 KVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLV 324 (334)
T ss_dssp CCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEE
T ss_pred EEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEE
Confidence 99999999999999 6665542211 00 011234899999999999999999999999999999999
Q ss_pred EecCC
Q psy17058 362 VEHRP 366 (471)
Q Consensus 362 V~~~p 366 (471)
|...|
T Consensus 325 V~~~~ 329 (334)
T 1ry7_B 325 VLPAE 329 (334)
T ss_dssp EECSC
T ss_pred EEECC
Confidence 98864
No 46
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=3.6e-32 Score=258.54 Aligned_cols=281 Identities=16% Similarity=0.190 Sum_probs=208.7
Q ss_pred ceEEEEecCcEEEEEEee-eCCccEEEeccchh----------------------------------hh---------he
Q psy17058 45 HEVTVYEGGDAELKCNTY-YAPGRWMWLNFYSF----------------------------------LS---------LI 80 (471)
Q Consensus 45 ~~~~v~~g~~~~l~C~~~-~~~~~~~w~~~~~~----------------------------------~~---------~~ 80 (471)
+.+.+.+|+.++|.|.+. .+...+.|++.... +. ..
T Consensus 2 e~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~ 81 (363)
T 1wio_A 2 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 81 (363)
T ss_dssp EEEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEE
T ss_pred CeEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEE
Confidence 458899999999999987 56678999976421 00 13
Q ss_pred eeeeeeecCCCCc-----EEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeE
Q psy17058 81 IICLAYLSPQANE-----VQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMIAGETLIINGITKADEGV 154 (471)
Q Consensus 81 ~~c~~~~~~~~~~-----v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 154 (471)
|.|.+........ +.+.| ...+.+|++++|.|. .+.|.+.+.|+++++.. ......|.|.+++.+|+|.
T Consensus 82 Y~C~~~n~~~~~~l~V~~~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~----~~~~~~L~i~~v~~~d~G~ 156 (363)
T 1wio_A 82 YICEVEDQKEEVQLLVFGLTANS-DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN----IQGGKTLSVSQLELQDSGT 156 (363)
T ss_dssp EEEEETTEEEEEEEEEEEEEESS-CSSEESBSCEEEEEECCTTCCCCEEEECSSSCE----EEESSEEEECSBCGGGCEE
T ss_pred EEEEEEECCCcEEEEEEeCCCCC-ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc----cccceEEEEeeCChhcCCE
Confidence 6787653322222 22334 457899999999999 67899999999994432 2256799999999999999
Q ss_pred EEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCC-----CCCCeEEEEeCCCCCCc----
Q psy17058 155 YICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAG-----EPSPTQTWIRPDNDGKF---- 225 (471)
Q Consensus 155 Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~-----~p~~~v~W~~~~~~~~~---- 225 (471)
|+|.+.+..+. .... +.|.+..+|... ....+.+|+.++|.|.+ .+ .|.+.++|++++..+..
T Consensus 157 Y~C~a~~~~~~-~~~~--~~l~v~~~p~~~----~~~~~~~G~~v~l~C~~-~~~~~~~~P~p~i~W~~~g~~~~~~~~~ 228 (363)
T 1wio_A 157 WTCTVLQNQKK-VEFK--IDIVVLAFQKAS----SIVYKKEGEQVEFSFPL-AFTVEKLTGSGELWWQAERASSSKSWIT 228 (363)
T ss_dssp CEEEEEETTEE-EEEC--CEECEECCSCSE----EEEEEETBCCEEEECCC-CCCCCSSCEEEEEEEEESSCCCCCCEEE
T ss_pred EEEEEecCCCe-EEEE--EEEEEecCCCCC----CceEEecCCEEEEEEEE-ecccccCCCceeEEEecCCCCccceEEE
Confidence 99999986543 3333 334333344322 34467789999999988 44 67789999999987654
Q ss_pred ----CCCceEEe----------e--eceEEEeccCCCCCeEEEEEEEcC--CCceEEEEEEEEEeCCceeeCCCccEEec
Q psy17058 226 ----GPDVEVYQ----------E--LGVLRFNNIATGDEGKYTCIAENS--AGKEVMNAYIHVLTLPAVTITPSEYVSVR 287 (471)
Q Consensus 226 ----~~~~~~~~----------~--~~~l~i~~~~~~d~G~Y~C~~~~~--~~~~~~~~~l~V~~~p~~~~~~~~~~~~~ 287 (471)
...+.+.. . ...|.|.++..+|+|.|+|.+.|. .|..+..+.|.|...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v-------------- 294 (363)
T 1wio_A 229 FDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRA-------------- 294 (363)
T ss_dssp EEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEE--------------
T ss_pred EEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEe--------------
Confidence 33333321 1 238999999999999999999999 888888888888621
Q ss_pred CCCcEEEEEEEeecCCCe--EEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 288 PGEPLTLECEATGRPMPT--VSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 288 ~g~~v~l~C~~~g~p~~~--i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
.|+.+.|.|.+.|.|.|. +.|++++..+.. ...|.|.++..+|+|.|+|.|.|. |....+..|.|
T Consensus 295 ~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~---------~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~~V 361 (363)
T 1wio_A 295 TQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV---------SKREKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKV 361 (363)
T ss_dssp CCCSSSEEEEEESSCCTTCCEEEECSSSSCSE---------EESSSEEEESSCCSEEEEEEECSS-SSCCEEEEEEE
T ss_pred cCCCeeEEEEEccccCCCccEEEEeCCCceee---------eeeeeeeeeccccceeEEEEEecC-CeEEEecceEe
Confidence 188999999999998887 999999987642 345678999999999999999964 45555556655
No 47
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=1.6e-31 Score=245.16 Aligned_cols=243 Identities=22% Similarity=0.385 Sum_probs=200.0
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEE--eeeceEEEeccCCCCCeEEEEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVY--QELGVLRFNNIATGDEGKYTCIAE 256 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~ 256 (471)
.+|.+...+ ....+.+|+.++|.|.+ .+.|.+.++|++++..+....++.+. .....|.|.+++.+|+|.|+|.+.
T Consensus 4 ~pP~~~~~p-~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 81 (284)
T 2rik_A 4 APPFFDLKP-VSVDLALGESGTFKCHV-TGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYAS 81 (284)
T ss_dssp CCCEEEECC-CCEEEETTCCEEEEEEE-ESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEccc-cceEecCCCcEEEEEEE-EcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEE
Confidence 456665555 45678899999999999 67788999999999876655554443 234679999999999999999999
Q ss_pred cCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc--cccccCceeEEEEee
Q psy17058 257 NSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL--ERDELTSRAVYTIAS 334 (471)
Q Consensus 257 ~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~l~i~~ 334 (471)
|..+..+..+.|.|..+|.+...+.....+.+|+.+.|.|.+.|.|.+.+.|++++..+.... ..........|.|.+
T Consensus 82 n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 161 (284)
T 2rik_A 82 NVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYN 161 (284)
T ss_dssp ETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECS
T ss_pred ECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECC
Confidence 998888889999999999887766555678999999999999999999999999998876432 222234567899999
Q ss_pred cCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCe
Q psy17058 335 VRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPR 414 (471)
Q Consensus 335 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~ 414 (471)
++.+|+|.|+|.|.|..|..+..+.|.|..+ |.
T Consensus 162 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-----------------------------------------------p~ 194 (284)
T 2rik_A 162 LSVEDSGDYTCEAHNAAGSASSSTSLKVKEP-----------------------------------------------PV 194 (284)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEECC-----------------------------------------------CB
T ss_pred CCcccCEEEEEEEEcCCCceeEEEEEEEecC-----------------------------------------------Cc
Confidence 9999999999999999999999999999875 56
Q ss_pred eEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEE----ec--CeEEECCCC
Q psy17058 415 ITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVE----YN--GELRLGPHK 470 (471)
Q Consensus 415 ~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~----~~--~~l~i~~~~ 470 (471)
+...+....+.+|+.+.|.|.+.|.|++.++|+|||..|..+.++ .+ .+|.|.+++
T Consensus 195 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 256 (284)
T 2rik_A 195 FRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVD 256 (284)
T ss_dssp CCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCC
T ss_pred ceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCC
Confidence 665666678889999999999999999999999999998765432 22 478888765
No 48
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=100.00 E-value=2.6e-31 Score=261.83 Aligned_cols=315 Identities=15% Similarity=0.257 Sum_probs=208.1
Q ss_pred EEEcCCceeecCCCcEEEEee-CCCC--CCeEEEEeCC-CCCC-------------------CCCcc-------cCcEEE
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDN-QEQL-------------------PPNMI-------AGETLI 143 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~-~~~~-------------------~~~~~-------~~~~L~ 143 (471)
....|..+.+.+|++++|.|. .+.+ ...+.|||+. +... ..+.. ....|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (475)
T 1iga_A 4 LLEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMG 83 (475)
T ss_pred eeccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEE
Confidence 344577889999999999999 5443 5789999963 1111 11111 124899
Q ss_pred EcCCCCCCCeEEEEEEEecCCc-----eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-C-eE
Q psy17058 144 INGITKADEGVYICSIQNAQGN-----VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-P-TQ 214 (471)
Q Consensus 144 i~~v~~~D~G~Y~C~~~~~~~~-----~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~-~v 214 (471)
|.+++.+|+|.|+|.+.+..+. .......|.|.. ..+|.+...+.. .+.+|+.++|.|.+....|. + .+
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~g~~v~L~C~~~g~~P~~p~~v 161 (475)
T 1iga_A 84 LSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLC--STQPDGNVVIACLVQGFFPQEPLSV 161 (475)
T ss_pred ECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCcc--ccCCCCeEEEEEEEeeecCCCceEE
Confidence 9999999999999999987642 122344566652 234555443322 23689999999999444465 4 99
Q ss_pred EEEeCCCCCCcCCCc-------eEEeeeceEEEeccCCCCCeEEEEEEEcCCCc-eEEEEEEEEE---------------
Q psy17058 215 TWIRPDNDGKFGPDV-------EVYQELGVLRFNNIATGDEGKYTCIAENSAGK-EVMNAYIHVL--------------- 271 (471)
Q Consensus 215 ~W~~~~~~~~~~~~~-------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~--------------- 271 (471)
+|++++......... ......+.|.|..+...|+|.|+|.+.|..+. ....+.|.|.
T Consensus 162 ~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~ 241 (475)
T 1iga_A 162 TWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPS 241 (475)
T ss_pred EEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCC
Confidence 999987532111100 01111345888888889999999999998763 2333333331
Q ss_pred ---eCCceeeCCCccEEecCCCcEEEEEEEeecCC---CeEEEEeCCccCCCccc-------ccccCceeEEEEeecCCC
Q psy17058 272 ---TLPAVTITPSEYVSVRPGEPLTLECEATGRPM---PTVSWVKYIAPFDRNLE-------RDELTSRAVYTIASVRES 338 (471)
Q Consensus 272 ---~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~---~~i~W~~~~~~~~~~~~-------~~~~~~~~~l~i~~~~~~ 338 (471)
..|.+.+.++....+.+|+++.|.|.+.|.++ +.+.| + +..+..... .......+.|.|.++..+
T Consensus 242 ~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~ 319 (475)
T 1iga_A 242 PSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWN 319 (475)
T ss_pred CCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEEEchHHhc
Confidence 13444333332223588999999999998754 58999 4 333321100 001124567999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEc
Q psy17058 339 DAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLR 418 (471)
Q Consensus 339 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~ 418 (471)
|+|.|+|.|.|..|.......|.+... ..+|.+.+.
T Consensus 320 d~G~Y~C~a~n~~~~~~~~~~v~~~~~--------------------------------------------~~~P~v~~~ 355 (475)
T 1iga_A 320 HGKTFTCTAAYPESKTPLTATLSKSGN--------------------------------------------TFRPEVHLL 355 (475)
T ss_pred cCCcEEEEEEcCCCCCceEEEeecCCC--------------------------------------------CCCCeEEEE
Confidence 999999999999998655555543221 125777665
Q ss_pred CCe-eeeeCCCeEEEEEEecccCC--ceEEEecCCCCCCCc
Q psy17058 419 PVR-QTVKPGDIANIRCSAIGATP--ISIRWQPLQGYFPSH 456 (471)
Q Consensus 419 ~~~-~~~~~g~~~~l~C~~~g~p~--~~v~W~~~g~~l~~~ 456 (471)
+.. ..+.+|+.+.|.|.+.|.++ +.|+|+|||++|..+
T Consensus 356 ~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 396 (475)
T 1iga_A 356 PPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 396 (475)
T ss_pred CCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCC
Confidence 544 34778999999999999644 499999999998655
No 49
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=100.00 E-value=5.4e-32 Score=251.70 Aligned_cols=260 Identities=14% Similarity=0.216 Sum_probs=191.7
Q ss_pred CceeecCCCcEEEEee--CCCCCCeEEEEeCCCCCCCCCcc-------cCcEEEEcCCCCCCCeEEEEEEEecCCceeee
Q psy17058 99 RQQSAPEGSQVTIECK--SNDPSATIKWSKDNQEQLPPNMI-------AGETLIINGITKADEGVYICSIQNAQGNVFQD 169 (471)
Q Consensus 99 ~~~~v~~G~~v~l~C~--~~~p~~~v~W~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~ 169 (471)
..+.+.+|+.+.|.|. .+.|.+.+.|+|+ +..+..... ....|.|.+++.+|+|.|+|.+.|..+. ..
T Consensus 9 ~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~-~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~-~~- 85 (312)
T 2y23_A 9 VVVNVDDDGVISLNFECDKMTPKSEFSWSKD-YVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGI-AS- 85 (312)
T ss_dssp CEEEECTTCCEEEEEECSSCCTTCCEEEEET-TEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCC-CE-
T ss_pred eeEEEecCCeEEEEEEEeCCCCCcEEEEEEC-CEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCc-EE-
Confidence 3567899999999988 5678899999999 555543222 2368999999999999999999998775 22
Q ss_pred eEEEEEeecc----------CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEee----e
Q psy17058 170 YASIQVDKRE----------MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQE----L 235 (471)
Q Consensus 170 ~~~l~v~~~~----------~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~----~ 235 (471)
...+.|.... +|.+...+.....+.+|+.++|.|.+..+.|.+.+.|++++..+....++.+... .
T Consensus 86 s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~ 165 (312)
T 2y23_A 86 SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGI 165 (312)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTE
T ss_pred EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCE
Confidence 3444443100 4554444333567889999999999944889999999999988666665555432 1
Q ss_pred ceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEE-------------------EeCCceeeCCCccEEecCCCcEEEEE
Q psy17058 236 GVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHV-------------------LTLPAVTITPSEYVSVRPGEPLTLEC 296 (471)
Q Consensus 236 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V-------------------~~~p~~~~~~~~~~~~~~g~~v~l~C 296 (471)
..|.|.+++.+|+|.|+|.+.+..........+.. ..+|.+... . ...+.+|+.+.|.|
T Consensus 166 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~~~v~~G~~~~l~C 243 (312)
T 2y23_A 166 IEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY-L-SWEVTGECNVLLKC 243 (312)
T ss_dssp EEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE-E-EEEEETTTEEEEEE
T ss_pred EEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeec-c-eEEEeCCCEEEEEE
Confidence 24999999999999999999865444433333210 112333321 1 25788999999999
Q ss_pred EEeecCCC-eEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 297 EATGRPMP-TVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 297 ~~~g~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
.+.|.|.+ .+.|++++..+..............|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 244 ~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 244 KVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp EEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred EEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 99999988 99999999887633222223445799999999999999999999999999999988764
No 50
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=100.00 E-value=2.3e-32 Score=268.15 Aligned_cols=315 Identities=15% Similarity=0.234 Sum_probs=202.3
Q ss_pred cCCceeecCCCcEEEEee-CCCC--CCeEEEEeCC-CCCC-------------------CCCcc-------cCcEEEEcC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDN-QEQL-------------------PPNMI-------AGETLIING 146 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~-~~~~-------------------~~~~~-------~~~~L~i~~ 146 (471)
+|..+.+.+|++++|.|. .+.+ .+.+.|+|+. +... ..+.. ....|.|.+
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (457)
T 1hzh_H 6 QSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRS 85 (457)
T ss_dssp ECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred cCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECC
Confidence 456788999999999999 5554 6789999852 1110 11111 124899999
Q ss_pred CCCCCCeEEEEEEEecCC---------c--eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-C
Q psy17058 147 ITKADEGVYICSIQNAQG---------N--VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-P 212 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~---------~--~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~ 212 (471)
++.+|+|.|+|.+.+..+ . .......+.|.. ..+|.+...+... .+.+|+.++|.|.+....|. +
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~~~ 164 (457)
T 1hzh_H 86 LRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPV 164 (457)
T ss_dssp CCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCS-CCCTTCCEEEEEEEESBBSCCC
T ss_pred CCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccc-cccCCCcEEEEEEEeEEeCCCe
Confidence 999999999999998754 0 122345566653 1245555443322 45789999999999544465 7
Q ss_pred eEEEEeCCCCCCcCCCceE------EeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEE---------------
Q psy17058 213 TQTWIRPDNDGKFGPDVEV------YQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVL--------------- 271 (471)
Q Consensus 213 ~v~W~~~~~~~~~~~~~~~------~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~--------------- 271 (471)
.++|++++..+........ ....+.|.|.++..+| |.|+|.+.|..+.......+.+.
T Consensus 165 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 243 (457)
T 1hzh_H 165 TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPE 243 (457)
T ss_dssp EEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCC
T ss_pred EEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCcc
Confidence 9999999865321110001 1113469999999989 99999999977665544444432
Q ss_pred --eCCceeeCCCccE-EecCCCcEEEEEEEeecCCC----eEEEEeCCccCCCccc-ccccCceeEEEEe------ecCC
Q psy17058 272 --TLPAVTITPSEYV-SVRPGEPLTLECEATGRPMP----TVSWVKYIAPFDRNLE-RDELTSRAVYTIA------SVRE 337 (471)
Q Consensus 272 --~~p~~~~~~~~~~-~~~~g~~v~l~C~~~g~p~~----~i~W~~~~~~~~~~~~-~~~~~~~~~l~i~------~~~~ 337 (471)
.+|.+.+.++... .+.+|+.+.|.|.+.|.|++ .+.|++++..+..... .......+.|.+. ....
T Consensus 244 ~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~ 323 (457)
T 1hzh_H 244 LLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDW 323 (457)
T ss_dssp CSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHH
T ss_pred ccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHc
Confidence 1344433332222 25789999999999997553 9999999987643211 0111122233333 3333
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEE
Q psy17058 338 SDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITL 417 (471)
Q Consensus 338 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~ 417 (471)
+|+|.|+|.|.|..+.......+.+... +..+|.+.+
T Consensus 324 ~d~G~Y~C~a~n~~~~~~~~~~v~~~~~-------------------------------------------~~~~P~v~~ 360 (457)
T 1hzh_H 324 LNGKEYKCKVSNKALPAPIEKTISKAKG-------------------------------------------QPREPQVYT 360 (457)
T ss_dssp HHTCCEEEEEECTTSSSCEEEEECCCCC-------------------------------------------CCBCCEEEE
T ss_pred cCCCcEEEEEeCCCCCCcceEEEEcccC-------------------------------------------CCCCCeEEE
Confidence 3499999999988766544433432111 013577776
Q ss_pred cCCe-eeeeCCCeEEEEEEecccCCc--eEEEecCCCCCCCce
Q psy17058 418 RPVR-QTVKPGDIANIRCSAIGATPI--SIRWQPLQGYFPSHV 457 (471)
Q Consensus 418 ~~~~-~~~~~g~~~~l~C~~~g~p~~--~v~W~~~g~~l~~~~ 457 (471)
.+.. ..+..|+ +.|.|.+.|.|++ .|+|+|||.+|....
T Consensus 361 ~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 402 (457)
T 1hzh_H 361 LPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYK 402 (457)
T ss_dssp ECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEE
T ss_pred ECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECccee
Confidence 6544 3455555 9999999997554 999999999986543
No 51
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=100.00 E-value=3e-32 Score=253.87 Aligned_cols=263 Identities=19% Similarity=0.267 Sum_probs=193.7
Q ss_pred CceeecCCCcEEEEee-CCCC-CCeEEEEeCCCCC-CC----CCcc-cCcEEEEcCCCCCCCeEEEEEEEecCCceeeee
Q psy17058 99 RQQSAPEGSQVTIECK-SNDP-SATIKWSKDNQEQ-LP----PNMI-AGETLIINGITKADEGVYICSIQNAQGNVFQDY 170 (471)
Q Consensus 99 ~~~~v~~G~~v~l~C~-~~~p-~~~v~W~~~~~~~-~~----~~~~-~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~ 170 (471)
..+.+.+|+++.|.|. .+.+ .+.+.|+|++... +. .+.. .++.|.|.+++.+|+|.|+|.+.|..+. ....
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~-~~~~ 91 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYC-LRIK 91 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCC-CCEE
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceE-EEEE
Confidence 3567999999999999 5655 7899999994321 11 1111 5568999999999999999999988766 4333
Q ss_pred EEEEEeeccCCeeeecC--CCceeEEcCCeEEEEEEcc-----CCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEecc
Q psy17058 171 ASIQVDKREMPRIRIHP--NASQTFIVGDRADIQCVLE-----AGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNI 243 (471)
Q Consensus 171 ~~l~v~~~~~p~~~~~~--~~~~~v~~g~~~~L~C~~~-----~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~ 243 (471)
..+.+.. .+|.+...+ .....+.+|+.++|.|.+. .+.|.+.++|++++..+.... .......+.|.|.++
T Consensus 92 ~~v~v~~-~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~-~~~~~~~~~L~i~~v 169 (315)
T 1itb_B 92 ISAKFVE-NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN-IHFSGVKDRLIVMNV 169 (315)
T ss_dssp CCCEEEC-CCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCS-SSEEEETTEEEESSC
T ss_pred EEEEEeC-CCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCcc-ceEeecCceEEEEec
Confidence 3344332 233322221 1124577899999999873 678889999999998765433 233444778999999
Q ss_pred CCCCCeEEEEEEE-cCCCce---EEEEEEEEE-----eCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCcc
Q psy17058 244 ATGDEGKYTCIAE-NSAGKE---VMNAYIHVL-----TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAP 314 (471)
Q Consensus 244 ~~~d~G~Y~C~~~-~~~~~~---~~~~~l~V~-----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~ 314 (471)
+.+|+|.|+|.+. |..+.. ...+.+.+. .+|.+...+.....+.+|+.+.|.|.+.|.|.|.+.|+++|..
T Consensus 170 ~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~ 249 (315)
T 1itb_B 170 AEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSV 249 (315)
T ss_dssp CGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEE
T ss_pred eehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEE
Confidence 9999999999999 677765 334445444 4555544443335789999999999999999999999999988
Q ss_pred CCCccccc--------------ccCceeEEEEeecCCCC-CeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 315 FDRNLERD--------------ELTSRAVYTIASVRESD-AGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 315 ~~~~~~~~--------------~~~~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
+....... .....+.|.|.+++.+| +|.|+|.|.|..|....++.|.|..
T Consensus 250 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 250 IDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp CCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred CCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 76432100 01234589999999999 9999999999999999999998854
No 52
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=100.00 E-value=2.3e-31 Score=249.45 Aligned_cols=258 Identities=19% Similarity=0.246 Sum_probs=190.2
Q ss_pred CceeecCCCcEEEEee-CC---------CCCCeEEEEeCCCCCCCC--CcccCcEEEEcCCCCCCCe-EEEEEEEecCCc
Q psy17058 99 RQQSAPEGSQVTIECK-SN---------DPSATIKWSKDNQEQLPP--NMIAGETLIINGITKADEG-VYICSIQNAQGN 165 (471)
Q Consensus 99 ~~~~v~~G~~v~l~C~-~~---------~p~~~v~W~~~~~~~~~~--~~~~~~~L~i~~v~~~D~G-~Y~C~~~~~~~~ 165 (471)
..+.+.+|+++.|.|. .+ .|.+.+.|+|+ +..+.. +....+.|.|.+++.+|+| .|+|.+.|..|.
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~-~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~ 115 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKI-GKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGD 115 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEEC-SSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSC
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEEC-CCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCc
Confidence 5667999999999999 43 36689999999 444322 1235789999999999999 999999998876
Q ss_pred eeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeEEEEeCCCCCCcCCCceEEeeeceEEEeccC
Q psy17058 166 VFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIA 244 (471)
Q Consensus 166 ~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 244 (471)
........+ +..+|.+... .....+.+|+.+.|.|.+ .+.| .+.+.|+|++..+..... .....++.|.|.+++
T Consensus 116 -~~~~~~~~v-~~~~p~~~~~-~~~~~~~~G~~v~L~C~~-~g~p~~~~i~W~k~~~~l~~~~~-~~~~~~~~L~I~~v~ 190 (329)
T 3oq3_B 116 -CVQGIVRSH-IRKPPSCIPE-TYELGTHDKYGIDLYCGI-LYAKHYNNITWYKNNQELIIDGT-KYSQSGQNLIIHNPE 190 (329)
T ss_dssp -EEEEEEEEE-ECCCCSCEEE-EEETTSSTTTCEEEECCC-CSCCCCCEEEEEETTEECCCSSS-SEEEETTEEEECSCC
T ss_pred -eeeEEEEEE-EcCCCcEecc-ccceEEeCCCcEEEEecc-CCCCCCceEEEEECCccCCCCCc-eEecCCCEEEEeecC
Confidence 222222222 2233432222 222235679999999998 7788 899999999987643332 223336889999999
Q ss_pred CCCCeEEEEEEEcC--CCce----EEEEEEEEEeCCc---eeeCCCccEEecCCCcEEEEEEEeecC---CC-eEEEEeC
Q psy17058 245 TGDEGKYTCIAENS--AGKE----VMNAYIHVLTLPA---VTITPSEYVSVRPGEPLTLECEATGRP---MP-TVSWVKY 311 (471)
Q Consensus 245 ~~d~G~Y~C~~~~~--~~~~----~~~~~l~V~~~p~---~~~~~~~~~~~~~g~~v~l~C~~~g~p---~~-~i~W~~~ 311 (471)
.+|+|.|+|.+.|. .+.. +..+.|.|..+|. ..+. .....+.+|+.+.|.|.+.|.| .+ .+.|+++
T Consensus 191 ~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~-~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~ 269 (329)
T 3oq3_B 191 LEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLIL-DPKINVTIGEPANITCTAVSTSLLVDDVLIDWENP 269 (329)
T ss_dssp GGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEEC-CSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECT
T ss_pred hhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceec-CCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEEC
Confidence 99999999999986 5443 3347788877662 2223 3457889999999999999988 77 8999999
Q ss_pred CccCC-Ccccc------cccCceeEEEEeecCCCCCe-EEEEEEEcCCCceEEEEEEEEe
Q psy17058 312 IAPFD-RNLER------DELTSRAVYTIASVRESDAG-QYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 312 ~~~~~-~~~~~------~~~~~~~~l~i~~~~~~d~G-~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
+..+. ..... ........|.|.+++.+|+| .|+|.|.|..|..+.++.|.|.
T Consensus 270 g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 270 SGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp TSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEEC
T ss_pred CeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEeC
Confidence 88742 22110 01125678999999999999 9999999999999999888773
No 53
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-31 Score=240.44 Aligned_cols=247 Identities=17% Similarity=0.251 Sum_probs=192.2
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCCCCC-eEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCceee
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SNDPSA-TIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNVFQ 168 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~-~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~ 168 (471)
.|.|.+.|....+.+|+.+.|.|. .+.|.+ .+.|+++ +..+.. ....|.|.+++.+|+|.|+|.+.+..+.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~-g~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~s--- 73 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLN-GTATQT---STPSYRITSASVNDSGEYRCQRGLSGRS--- 73 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEET-TEECSC---CSSEEEESSCCGGGCEEEEEEESSSCCC---
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEEC-CEEeec---cCCeEEEecCCcccCeEEEEEEecCCcc---
Confidence 478899999999999999999999 777776 9999998 655543 3678999999999999999999876543
Q ss_pred eeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCC
Q psy17058 169 DYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDE 248 (471)
Q Consensus 169 ~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 248 (471)
....+.|. .++.. ..+. ...+.+|+.+.|.|.+..+.|.+.+.|++++..+. .......|.|.+++.+|.
T Consensus 74 ~~~~l~v~--~~~~~-~~~~-~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~------~~~~~~~l~i~~~~~~d~ 143 (262)
T 3rjd_A 74 DPIQLEIH--RGWLL-LQVS-SRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFK------FFHWNSNLTILKTNISHN 143 (262)
T ss_dssp CCEEEEEE--CSSEE-EEES-CSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEE------EEEECCCEEESSCCGGGC
T ss_pred ccEEEEEe--ccceE-ecCC-CeEEecCCeEEEEEEccCCCCCceEEEEECCcccc------ccCCCCeEEEEECChhhC
Confidence 23445544 44433 3332 34678999999999996778889999999887632 223356899999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCC-C----eEEEEeCCccCCCccc
Q psy17058 249 GKYTCIAENSAGKEVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPM-P----TVSWVKYIAPFDRNLE 320 (471)
Q Consensus 249 G~Y~C~~~~~~~~~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~-~----~i~W~~~~~~~~~~~~ 320 (471)
|.|+|.+.|..+..+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+.|. + .+.|++++..+..
T Consensus 144 G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~--~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~--- 218 (262)
T 3rjd_A 144 GTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV--TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRG--- 218 (262)
T ss_dssp EEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS--CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEE---
T ss_pred EEEEEEEeCCCCccccceEEEeccCCCCCeEeecC--ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecc---
Confidence 999999999987777788888885 34444444 345788999999999999875 4 3789999877642
Q ss_pred ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceE---EEEEEEE
Q psy17058 321 RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEE---KVITVAV 362 (471)
Q Consensus 321 ~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~---~~~~l~V 362 (471)
......|.|.+++.+|+|.|+|.|.|..|... ..+.|.|
T Consensus 219 ---~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l~V 260 (262)
T 3rjd_A 219 ---RNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQV 260 (262)
T ss_dssp ---EESCCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEECE
T ss_pred ---cCCCceEEEEEechhhCeEEEEEEEcccCceEEecCCeEEEE
Confidence 23456899999999999999999999999752 2345544
No 54
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=2.5e-33 Score=273.17 Aligned_cols=314 Identities=15% Similarity=0.208 Sum_probs=209.2
Q ss_pred cCCceeecCCCcEEEEee-CCC--CCCeEEEEeCC-CCCC-------------------CCCcc-------cCcEEEEcC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SND--PSATIKWSKDN-QEQL-------------------PPNMI-------AGETLIING 146 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~--p~~~v~W~~~~-~~~~-------------------~~~~~-------~~~~L~i~~ 146 (471)
.|..+.+.+|++++|.|. .+. +.+.+.|+|++ +..+ ..+.. ....|.|.+
T Consensus 5 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (434)
T 1igy_B 5 ESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSS 84 (434)
T ss_dssp CCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECS
T ss_pred CCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECC
Confidence 355678999999999999 554 36789999973 1110 11111 134799999
Q ss_pred CCCCCCeEEEEEEEecCCceeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCC
Q psy17058 147 ITKADEGVYICSIQNAQGNVFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDG 223 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~ 223 (471)
++.+|+|.|+|.+.+..+. ......|.|.. ..+|.+....+.. .+.+|+.++|.|.+....|.+ .++|++++..+
T Consensus 85 v~~~D~G~Y~C~~~~~~~~-~~~~~~l~V~~~~~~~P~i~~~~~~~-~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~ 162 (434)
T 1igy_B 85 LTSDDSAVYYCVREGEVPY-WGQGTTVTVSSAKTTPPSVYPLAPGS-AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 162 (434)
T ss_dssp BCGGGCSEECCCCSSSSCC-CCCCEECEECCSCCBCCCEEEECCCC-CCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCS
T ss_pred CChHHCEEEEEEEEccccc-cCCceEEEEccCCCCCCeEEEcCCcc-ccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCC
Confidence 9999999999999885433 33445666652 2345554433322 357899999999995444765 99999998753
Q ss_pred CcCCCc-----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEe----------C--CceeeCCCccEE-
Q psy17058 224 KFGPDV-----EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLT----------L--PAVTITPSEYVS- 285 (471)
Q Consensus 224 ~~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~----------~--p~~~~~~~~~~~- 285 (471)
...... ..+...+.|.|.++..+| |.|+|.+.|..+.......+.+.. . |.+.+.++....
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~ 241 (434)
T 1igy_B 163 GVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDT 241 (434)
T ss_dssp SEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHH
T ss_pred CeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHh
Confidence 211000 111224568999999888 999999999888754444443321 0 444444332222
Q ss_pred ecCCCcEEEEEEEeecC----CCeEEEEeCCccCCCccc-------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCce
Q psy17058 286 VRPGEPLTLECEATGRP----MPTVSWVKYIAPFDRNLE-------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE 354 (471)
Q Consensus 286 ~~~g~~v~l~C~~~g~p----~~~i~W~~~~~~~~~~~~-------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 354 (471)
+.+|+.+.|.|.+.|.+ .+.+.|++++..+..... .......+.|.|..+..+|+|.|+|.|.|..|..
T Consensus 242 v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 321 (434)
T 1igy_B 242 LLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPA 321 (434)
T ss_dssp HSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSS
T ss_pred cccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCC
Confidence 78999999999999874 358999999877642211 0111234679999999999999999999998865
Q ss_pred EEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEE
Q psy17058 355 EKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRC 434 (471)
Q Consensus 355 ~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C 434 (471)
.....+.+... +..+|.+...+.......|+.+.|.|
T Consensus 322 ~~~~~v~~~~~-------------------------------------------~~~~P~v~~~~~~~~~~~~~~~~L~C 358 (434)
T 1igy_B 322 PIEKTISKTKG-------------------------------------------KPRAPQVYTIPPPKEQMAKDKVSLTC 358 (434)
T ss_dssp CCCCCCCCCCS-------------------------------------------CCBCCCCEEECCCSSSSSSSEEEEEE
T ss_pred ceeEEEeccCC-------------------------------------------CCcCCEEEEECCCHHHhcCCcEEEEE
Confidence 33222222100 01257776665544445678899999
Q ss_pred Eeccc-CC-ceEEEecCCCCCCCc
Q psy17058 435 SAIGA-TP-ISIRWQPLQGYFPSH 456 (471)
Q Consensus 435 ~~~g~-p~-~~v~W~~~g~~l~~~ 456 (471)
.+.|. |+ +.|+|+|||++|...
T Consensus 359 ~~~g~~P~~~~v~W~k~g~~l~~~ 382 (434)
T 1igy_B 359 MITDFFPEDITVEWQSDGQAPENY 382 (434)
T ss_dssp EEEEEBCSCEEEEEEETTSCCSCC
T ss_pred EEEeeECCCeEEEEEECCEecCCc
Confidence 99985 43 499999999998654
No 55
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.98 E-value=8.7e-32 Score=247.88 Aligned_cols=268 Identities=15% Similarity=0.181 Sum_probs=193.6
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-cCcEEEEcCCCCCCCeEEEEEEEecCCcee
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-AGETLIINGITKADEGVYICSIQNAQGNVF 167 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~ 167 (471)
.+|.|...+....+.+|++++|.|. .+. +.|++++......... ..+.|.|.+++.+|+|.|+|.+.|..+. .
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~-~ 77 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLG-G 77 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC-----C
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCC-c
Confidence 5788999999999999999999999 442 9999873322111111 3469999999999999999999987765 4
Q ss_pred eeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCC-CCCCcCCCceEEeeeceEEEeccCCC
Q psy17058 168 QDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPD-NDGKFGPDVEVYQELGVLRFNNIATG 246 (471)
Q Consensus 168 ~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~ 246 (471)
.....|.| ..+|...........+.+|+.++|.|.+....+.+.+.|++++ ..+.....+.... ...|.|.+++.+
T Consensus 78 ~~~~~l~V--~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~ 154 (292)
T 4dkd_C 78 SAAIHLYV--KDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSP-WHGFTIHRAKFI 154 (292)
T ss_dssp CEEECCEE--CCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECCS-SSCCEETTCCGG
T ss_pred ceEEEEEE--cCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccccC-CceEEECCCCHH
Confidence 44444444 4555543444456678899999999999432222789999984 4433333333333 456999999999
Q ss_pred CCeEEEEEEEcCCCce-EEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeecCC-CeEEEEeCCccCCCccc
Q psy17058 247 DEGKYTCIAENSAGKE-VMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGRPM-PTVSWVKYIAPFDRNLE 320 (471)
Q Consensus 247 d~G~Y~C~~~~~~~~~-~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~-~~i~W~~~~~~~~~~~~ 320 (471)
|+|.|+|.+.|..+.. +..+.|.|.. +|.+...+. ...+.+|+.+.|.|.+.+.|. +.+.|++++..+.....
T Consensus 155 d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~-~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~ 233 (292)
T 4dkd_C 155 QSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPA-ELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQ 233 (292)
T ss_dssp GCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESS-CBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBE
T ss_pred HCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCC-ceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCcc
Confidence 9999999999876654 4478888886 777766654 345679999999999998765 47899998876642211
Q ss_pred ----ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 321 ----RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 321 ----~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
.......++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|....
T Consensus 234 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 234 SDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESA 283 (292)
T ss_dssp EEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred ceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCC
Confidence 1112244689999999999999999999999999999999998764
No 56
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.98 E-value=4.4e-31 Score=247.75 Aligned_cols=266 Identities=19% Similarity=0.289 Sum_probs=196.8
Q ss_pred cEEEcCCceeecCCCcEEEEee-CCC----CCCeEEEEeCCCC------------------CCCCCcc------cCcEEE
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECK-SND----PSATIKWSKDNQE------------------QLPPNMI------AGETLI 143 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~-~~~----p~~~v~W~~~~~~------------------~~~~~~~------~~~~L~ 143 (471)
.+...|..+.+.+|++++|.|. .+. +.+.+.|++++.. ....+.. ...+|.
T Consensus 16 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~ 95 (331)
T 3u83_A 16 QVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIR 95 (331)
T ss_dssp -----CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEE
T ss_pred ceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEE
Confidence 3344466789999999999999 544 4457999996311 0111111 356899
Q ss_pred EcCCCCCCCeEEEEEEE-ecCCceeeeeEEEEEeeccCCeeeec-CCCceeEEcC---CeEEEEEEccCCCCCCeEEEEe
Q psy17058 144 INGITKADEGVYICSIQ-NAQGNVFQDYASIQVDKREMPRIRIH-PNASQTFIVG---DRADIQCVLEAGEPSPTQTWIR 218 (471)
Q Consensus 144 i~~v~~~D~G~Y~C~~~-~~~~~~~~~~~~l~v~~~~~p~~~~~-~~~~~~v~~g---~~~~L~C~~~~~~p~~~v~W~~ 218 (471)
|.+++.+|+|.|+|.+. +..+. ......|.|. .+|.+... ......+.+| +.++|.|.+..+.|.+.+.|++
T Consensus 96 I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~~l~V~--~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~ 172 (331)
T 3u83_A 96 LSRLELEDEGVYICEFATFPTGN-RESQLNLTVM--AKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWET 172 (331)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEE-EEEEEEEEEE--BCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEE
T ss_pred EcccCcccCcEEEEEEEecCCCc-cEEEEEEEEe--cCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEc
Confidence 99999999999999854 43443 4445555554 55655332 3344567788 7899999843788999999999
Q ss_pred CCCCCCcC-----CCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEE
Q psy17058 219 PDNDGKFG-----PDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLT 293 (471)
Q Consensus 219 ~~~~~~~~-----~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~ 293 (471)
++...... .... ......|.|..+..+|+|.|+|.+.|..+..+..+.|.|..+|.+.+.+.....+.+|+.+.
T Consensus 173 ~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~ 251 (331)
T 3u83_A 173 RLKGEAEYQEIRNPNGT-VTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVK 251 (331)
T ss_dssp SSCCEEEEEEEECTTSC-EEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEE
T ss_pred CCCCccccceeECCCCc-EEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEE
Confidence 75432211 0111 11135688888999999999999999988888889999998888876665555788999999
Q ss_pred EEEEEeecCCCe-EEEEeCCccCCCcccccccCceeEEEEe-ecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 294 LECEATGRPMPT-VSWVKYIAPFDRNLERDELTSRAVYTIA-SVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 294 l~C~~~g~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
|.|.+.|+|.+. +.|++++..+..... ....+|.|. ++..+|+|.|+|.|.|..|..+..+.|.|...+
T Consensus 252 l~C~~~g~p~p~~i~W~~~~~~~~~~~~----~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 322 (331)
T 3u83_A 252 LTCKADANPPATEYHWTTLNGSLPKGVE----AQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAA 322 (331)
T ss_dssp EEEEEEEESCCCEEEEEETTBSCCTTEE----EETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC--
T ss_pred EEEeCcCCCCCCEEEEEECCCcccccce----ecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccc
Confidence 999999999997 999999988754422 244689999 899999999999999999999999999998865
No 57
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.97 E-value=3.9e-32 Score=255.86 Aligned_cols=273 Identities=17% Similarity=0.287 Sum_probs=201.7
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-C-------CCCCCeEEEEeCCCCC-CCCC----c-ccCcEEEEcCCCCCCCeE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-S-------NDPSATIKWSKDNQEQ-LPPN----M-IAGETLIINGITKADEGV 154 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~-------~~p~~~v~W~~~~~~~-~~~~----~-~~~~~L~i~~v~~~D~G~ 154 (471)
...|.+...|..+.+.+|+++.|.|. . +.|.+.+.|++++... +... . ..++.|.|.+++.+|+|.
T Consensus 16 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 95 (339)
T 3o4o_C 16 RSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGT 95 (339)
T ss_dssp --CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEE
T ss_pred hhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEE
Confidence 45678888999999999999999999 5 8889999999994432 3322 1 156799999999999999
Q ss_pred EEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEc----cCCCCCCeEEEEeCCCCCCcC-CCc
Q psy17058 155 YICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVL----EAGEPSPTQTWIRPDNDGKFG-PDV 229 (471)
Q Consensus 155 Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~----~~~~p~~~v~W~~~~~~~~~~-~~~ 229 (471)
|+|.+.|..+. ......|.|.....+..... .....+.+|+.++|.|.+ ..+.|.+.+.|++++..+... .++
T Consensus 96 Y~C~~~n~~g~-~~~~~~l~V~~~~~~~~~~~-~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~ 173 (339)
T 3o4o_C 96 YVCTTRNASYC-DKMSIELRVFENTDAFLPFI-SYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKF 173 (339)
T ss_dssp EECCEEETTEE-EEEEEEEEEECSCGGGHHHH-CEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSE
T ss_pred EEEEEECCcce-EEEEEEEEEEcCCCcccccc-ccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCcee
Confidence 99999998765 55556666653222111111 122367899999999993 267888999999999876554 334
Q ss_pred eEEeeeceEEEeccCCCCCeEEEEEEEcCCC----ceEEEEEEEEEeC-----CceeeCCCccEEecCCCcEEEEEEE--
Q psy17058 230 EVYQELGVLRFNNIATGDEGKYTCIAENSAG----KEVMNAYIHVLTL-----PAVTITPSEYVSVRPGEPLTLECEA-- 298 (471)
Q Consensus 230 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~V~~~-----p~~~~~~~~~~~~~~g~~v~l~C~~-- 298 (471)
......+.|.|.+++.+|+|.|+|.+.|..+ ..+..+.|.|... |.+. .+.....+.+|+.+.|.|.+
T Consensus 174 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~-~~~~~~~v~~G~~v~L~C~~~~ 252 (339)
T 3o4o_C 174 LSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVII-SPLKTISASLGSRLTIPCKVFL 252 (339)
T ss_dssp EECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEEC-CCSCCCCCCCCSCCCCCCCEEE
T ss_pred EEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEe-cCCceeEeccCCCEEEEEEEEC
Confidence 3333345899999999999999999999876 3566778888753 3333 33445578899999999999
Q ss_pred -eecC-CCeEEEEeCCccCCCccc--------ccccCc------eeEEEEeecCCCCC-eEEEEEEEcCCCceEEEEEEE
Q psy17058 299 -TGRP-MPTVSWVKYIAPFDRNLE--------RDELTS------RAVYTIASVRESDA-GQYKCIGKNSAGTEEKVITVA 361 (471)
Q Consensus 299 -~g~p-~~~i~W~~~~~~~~~~~~--------~~~~~~------~~~l~i~~~~~~d~-G~Y~C~a~n~~g~~~~~~~l~ 361 (471)
.|.| .+.+.|++++..+..... ...... ...|.|.+++.+|+ |.|+|.|.|..|..+..+.+.
T Consensus 253 ~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~ 332 (339)
T 3o4o_C 253 GTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVK 332 (339)
T ss_dssp SSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCC
T ss_pred CCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhh
Confidence 8888 779999999987642110 000111 22799999999997 999999999999998877766
Q ss_pred Eec
Q psy17058 362 VEH 364 (471)
Q Consensus 362 V~~ 364 (471)
++.
T Consensus 333 ~~~ 335 (339)
T 3o4o_C 333 EHH 335 (339)
T ss_dssp C--
T ss_pred Hhc
Confidence 553
No 58
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=3.8e-31 Score=250.14 Aligned_cols=263 Identities=20% Similarity=0.241 Sum_probs=164.5
Q ss_pred CCceeecCCCcEEEEee-CCCCC-----------CeEEEEeCCCC-----CCC---CCc---ccCcEEEEcCCCCCCCeE
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDPS-----------ATIKWSKDNQE-----QLP---PNM---IAGETLIINGITKADEGV 154 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p~-----------~~v~W~~~~~~-----~~~---~~~---~~~~~L~i~~v~~~D~G~ 154 (471)
...+.+.+|+++.|.|. .+.|. +.+.|++++.. .+. ... ..++.|.|.+++.+|+|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGN 93 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEE
Confidence 35678999999999999 65553 89999999421 111 011 156789999999999999
Q ss_pred EEEEEEecCCceeeeeEEEEEeeccCCeeee---cCCCceeEEcCCeEEEEEEcc----CCCCCCeEEEEeCCCCCCcCC
Q psy17058 155 YICSIQNAQGNVFQDYASIQVDKREMPRIRI---HPNASQTFIVGDRADIQCVLE----AGEPSPTQTWIRPDNDGKFGP 227 (471)
Q Consensus 155 Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~---~~~~~~~v~~g~~~~L~C~~~----~~~p~~~v~W~~~~~~~~~~~ 227 (471)
|+|.+.|..+. ......|.|.. ++.... ..+....+.+|+.+.|.|.+. .+.|.+.+.|+|++..+..
T Consensus 94 Y~C~a~n~~~~-~~~~~~l~V~~--~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~-- 168 (349)
T 4dep_C 94 YTCMLRNTTYC-SKVAFPLEVVQ--KDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQN-- 168 (349)
T ss_dssp EEEEEECSSCE-EEEEEEEEEEC--CCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCS--
T ss_pred EEEEEecCCce-EEEEEEEEEec--CCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCC--
Confidence 99999998776 55556666653 222111 112234567899999999741 4578899999999886433
Q ss_pred CceEEeeeceEEEeccCCCCCeEEEEEEEcCC-Cce---EEEEEEEEEe------CCceeeCCCccE-EecCCCcEEEEE
Q psy17058 228 DVEVYQELGVLRFNNIATGDEGKYTCIAENSA-GKE---VMNAYIHVLT------LPAVTITPSEYV-SVRPGEPLTLEC 296 (471)
Q Consensus 228 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~~---~~~~~l~V~~------~p~~~~~~~~~~-~~~~g~~v~l~C 296 (471)
+..+...+..|.|.+++.+|+|.|+|.+.|.. +.. +..+.|.|.. +|.+...+.... .+.+|+.+.|.|
T Consensus 169 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C 248 (349)
T 4dep_C 169 FNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPC 248 (349)
T ss_dssp CSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCE
T ss_pred ccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEE
Confidence 34445556789999999999999999999976 443 5666777765 344433322122 678999999999
Q ss_pred EEe----ecCCCeEEEEeCCccCCCcc-c--c---------cccCceeEEEEeecCCCCC-eEEEEEEEcCCCceEEEEE
Q psy17058 297 EAT----GRPMPTVSWVKYIAPFDRNL-E--R---------DELTSRAVYTIASVRESDA-GQYKCIGKNSAGTEEKVIT 359 (471)
Q Consensus 297 ~~~----g~p~~~i~W~~~~~~~~~~~-~--~---------~~~~~~~~l~i~~~~~~d~-G~Y~C~a~n~~g~~~~~~~ 359 (471)
.+. |.|.+.+.|++++..+.... . . .......+|.|.++..+|+ |.|+|.|.|..|.....+.
T Consensus 249 ~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~ 328 (349)
T 4dep_C 249 TVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAK 328 (349)
T ss_dssp EEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC
T ss_pred EEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEE
Confidence 999 46888999999998875411 1 0 0011245599999999999 9999999999999999999
Q ss_pred EEEecC
Q psy17058 360 VAVEHR 365 (471)
Q Consensus 360 l~V~~~ 365 (471)
|.|..+
T Consensus 329 l~v~~~ 334 (349)
T 4dep_C 329 VKQKVP 334 (349)
T ss_dssp ------
T ss_pred EeeecC
Confidence 988753
No 59
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.97 E-value=7.2e-31 Score=241.38 Aligned_cols=261 Identities=17% Similarity=0.236 Sum_probs=180.9
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc------cCcEEEEcCCCCCCCeEEEEEEEecCC
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI------AGETLIINGITKADEGVYICSIQNAQG 164 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~------~~~~L~i~~v~~~D~G~Y~C~~~~~~~ 164 (471)
|.|...+..+.+.+|+++.|.|. .+. +.|+++ +..+..... ..+.|.|.+++.+|+|.|+|.+.|..+
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 75 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERM-SQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRG 75 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBT-TBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC---
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECC-CCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccCC
Confidence 34445556778999999999999 543 999999 555432211 236899999999999999999998776
Q ss_pred ceeeeeEEEEEeeccCCeeeecCCCc---eeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEe
Q psy17058 165 NVFQDYASIQVDKREMPRIRIHPNAS---QTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFN 241 (471)
Q Consensus 165 ~~~~~~~~l~v~~~~~p~~~~~~~~~---~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~ 241 (471)
........+.|.+..+....+..... ..+.+|+.++|.|.+ . .|.+.++|++++......... .. ...+.
T Consensus 76 ~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~-~-~p~~~v~w~~~~~~~~~~~~~--~~-~~~~~-- 148 (289)
T 3mjg_X 76 LETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRV-T-DPQLVVTLHEKKGDVALPVPY--DH-QRGFS-- 148 (289)
T ss_dssp ---CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCB-S-CTTSCEEEEESSCCSCCCCCE--ET-TTEEE--
T ss_pred CCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEc-C-CCCceEEEEeCCCCCccceee--cC-CcCee--
Confidence 53334455666554333222222212 457899999999999 3 677889998876443332111 11 11121
Q ss_pred ccCCCCCeEEEEEEEcCCCce-EEEEEEEEEe--CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCc
Q psy17058 242 NIATGDEGKYTCIAENSAGKE-VMNAYIHVLT--LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRN 318 (471)
Q Consensus 242 ~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~--~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~ 318 (471)
...|+|.|+|.+.|..+.. +..+.|.|.. +|.+.+.+.. ..+.+|+++.|.|.+.|+|.+.+.|++++......
T Consensus 149 --~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~-~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~ 225 (289)
T 3mjg_X 149 --GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQ-TVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRL 225 (289)
T ss_dssp --ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESC-SEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCC
T ss_pred --eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCc-ceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCc
Confidence 3579999999999776543 3335566654 5666555433 56889999999999999999999999877654321
Q ss_pred cc---cc----ccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCC
Q psy17058 319 LE---RD----ELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPE 367 (471)
Q Consensus 319 ~~---~~----~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 367 (471)
.. .. ......+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|...+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 281 (289)
T 3mjg_X 226 VEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVES 281 (289)
T ss_dssp CCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC-
T ss_pred ccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEec
Confidence 11 00 133568999999999999999999999999999999999998763
No 60
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.97 E-value=2.2e-30 Score=240.03 Aligned_cols=244 Identities=29% Similarity=0.500 Sum_probs=184.9
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEe--e--eceEEEeccCC-CCCeEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQ--E--LGVLRFNNIAT-GDEGKYTC 253 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~--~--~~~l~i~~~~~-~d~G~Y~C 253 (471)
.+|.+...+ ....+.+|+.++|.|.+ .+.|.+.++|++++..+.. .+..... . ...|.|.+++. +|+|.|+|
T Consensus 5 ~~P~~~~~p-~~~~v~~G~~v~l~C~~-~g~p~~~i~W~k~g~~i~~-~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C 81 (304)
T 2yd9_A 5 EPPRFIKEP-KDQIGVSGGVASFVCQA-TGDPKPRVTWNKKGKKVNS-QRFETIEFDESAGAVLRIQPLRTPRDENVYEC 81 (304)
T ss_dssp CCCEEEECC-CCEEEETTSCEEEEEEE-ECSSCCEEEEC-------C-TTEEEEEETTTTEEEEEECSCCTTTTCSEEEE
T ss_pred cCCeeeecC-CceEecCCCeEEEEEEE-EEeCCCeEEEEECCEECCC-CceEEEEecCCCceEEEEecccccCCCeEEEE
Confidence 456665554 45678999999999999 7888899999999987533 2333321 1 25799999998 99999999
Q ss_pred EEEcCCCceEEEEEEEEEeC-------CceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--cccc
Q psy17058 254 IAENSAGKEVMNAYIHVLTL-------PAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDEL 324 (471)
Q Consensus 254 ~~~~~~~~~~~~~~l~V~~~-------p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~ 324 (471)
.+.|..+..+..+.|.|... |.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ....
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~-~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~ 160 (304)
T 2yd9_A 82 VAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGP-QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQ 160 (304)
T ss_dssp EEECSSCEECCEEEEEEECGGGCCTTCCEEEECC-CCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEE
T ss_pred EEECCCCeEEEEEEEEEeccccCCCCCCeeecCC-ccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEe
Confidence 99999888888889999875 4555544 346788999999999999999999999999988764321 1112
Q ss_pred CceeEEEEeecCCCCCeEEEEEEEcCCCceEEE-EEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCc
Q psy17058 325 TSRAVYTIASVRESDAGQYKCIGKNSAGTEEKV-ITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSN 403 (471)
Q Consensus 325 ~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 403 (471)
...+.|.|.+++.+|+|.|+|.|.|..|..... ..|.|....
T Consensus 161 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~------------------------------------- 203 (304)
T 2yd9_A 161 LRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQN------------------------------------- 203 (304)
T ss_dssp CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCC-------------------------------------
T ss_pred CCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeec-------------------------------------
Confidence 344589999999999999999999999876533 455554321
Q ss_pred ceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEEecC--eEEECCCC
Q psy17058 404 ASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVEYNG--ELRLGPHK 470 (471)
Q Consensus 404 ~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~~~~--~l~i~~~~ 470 (471)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.|+|+|||..|..+..+..+ .|.|.+++
T Consensus 204 -------~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~ 265 (304)
T 2yd9_A 204 -------VAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDVK 265 (304)
T ss_dssp -------EEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCCBSEEEEEECSCC
T ss_pred -------cCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccccCCcEEEEEcccc
Confidence 2588888888888999999999999999999999999999999776554433 46666654
No 61
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.97 E-value=4.9e-30 Score=238.99 Aligned_cols=266 Identities=18% Similarity=0.255 Sum_probs=181.7
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc---cCcEEEEcCCCCCCCeEEEEEEEecCC
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI---AGETLIINGITKADEGVYICSIQNAQG 164 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~~~~~~~ 164 (471)
..+|.|...|. ..+.+|++++|.|. .+. .+.+.|+|+ +..+..... ....|.|.+++.+|+|.|+|.+.+..+
T Consensus 22 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~-g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~ 98 (316)
T 3vh8_G 22 QDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKE-DRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHS 98 (316)
T ss_dssp --CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEES-SCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSS
T ss_pred CCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeC-CCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCC
Confidence 47889999987 67889999999999 544 688999999 444432211 567899999999999999999986322
Q ss_pred c----eeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceE---Eeeec
Q psy17058 165 N----VFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEV---YQELG 236 (471)
Q Consensus 165 ~----~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~---~~~~~ 236 (471)
. ..+....|.|... .+|.+...+. . .+.+|+.++|.|.+ . .+.+.+.|++++..+........ .....
T Consensus 99 ~~~~~~~s~~~~l~V~~~~~~p~~~~~~~-~-~v~~G~~v~L~C~~-~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~ 174 (316)
T 3vh8_G 99 PTGWSAPSNPVVIMVTGNHRKPSLLAHPG-P-LVKSGERVILQCWS-D-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKA 174 (316)
T ss_dssp SSSBCCCCCCEEEEEECSSCCCEEEEESC-S-EEETTCCEEEEEEE-S-SCCSEEEEEETTCCSCCEEEECEEETTEEEE
T ss_pred CcceecCCCcEEEEEecCCCCCeEEecCC-C-ccCCCCeEEEEEcC-C-CCCcEEEEEECCCccccceeeeeecCCCceE
Confidence 1 1334455666532 2455554443 2 47899999999998 3 45679999999887533211111 12356
Q ss_pred eEEEeccCCCCCeEEEEEEEcCCCc-----eEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEE
Q psy17058 237 VLRFNNIATGDEGKYTCIAENSAGK-----EVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSW 308 (471)
Q Consensus 237 ~l~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W 308 (471)
.|.|.+++.+|+|.|+|.+.|..+. .+..+.|.|.. +|.+...+. ..+.+|++++|.|.+. .|.+.+.|
T Consensus 175 ~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~--~~v~~G~~v~L~C~~~-~~~~~~~W 251 (316)
T 3vh8_G 175 NFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG--PKVQAGESVTLSCSSR-SSYDMYHL 251 (316)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC--SCCCTTSCCEEEEEES-SCCSEEEE
T ss_pred EEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC--CeecCCCcEEEEEECC-CCCcEEEE
Confidence 7999999999999999999998764 24556677763 345555443 2578999999999997 57789999
Q ss_pred EeCCccCCCccc---ccccCceeEEEEeecCCCCCeEEEEEEEcCCCc-----eEEEEEEEEecCC
Q psy17058 309 VKYIAPFDRNLE---RDELTSRAVYTIASVRESDAGQYKCIGKNSAGT-----EEKVITVAVEHRP 366 (471)
Q Consensus 309 ~~~~~~~~~~~~---~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~~~p 366 (471)
++++..+..... .........|.|.+++ |+|.|+|.|.|..+. .+..+.|.|.+.|
T Consensus 252 ~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 252 SREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp EETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred EECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 999988753221 1122334789999999 999999999997663 3566778777654
No 62
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.97 E-value=4.9e-30 Score=232.69 Aligned_cols=247 Identities=15% Similarity=0.236 Sum_probs=185.6
Q ss_pred cCCCCcEEEcCCceeecCCCcEEEEee-CC-CCCC--eEEEEeCCCCCCCCCcc-cCcEEEEcCC---CCCCCeE--EEE
Q psy17058 88 SPQANEVQVTPRQQSAPEGSQVTIECK-SN-DPSA--TIKWSKDNQEQLPPNMI-AGETLIINGI---TKADEGV--YIC 157 (471)
Q Consensus 88 ~~~~~~v~~~p~~~~v~~G~~v~l~C~-~~-~p~~--~v~W~~~~~~~~~~~~~-~~~~L~i~~v---~~~D~G~--Y~C 157 (471)
++.+|.+... ..+.+|++++|.|. .+ .|.+ .+.|+++ +..+..... .+..|.+..+ +.+|+|. |+|
T Consensus 3 P~~~p~~~~~---~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~-~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C 78 (265)
T 2oz4_A 3 PATPPQLVSP---RVLEVDTQGTVVCSLDGLFPVSEAQVHLALG-DQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTC 78 (265)
T ss_dssp CSSCCEEECC---SEEETTEEEEEEEEEESCSCGGGCEEEEEET-TEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEE
T ss_pred CCCCCccccC---ceEecCCCEEEEEEccCCCCCcceEEEEEeC-CEECCceEeeCCCeEEEEeecccccccCCcceEEE
Confidence 3456666542 37899999999999 55 6766 9999999 655554333 4557777766 7788885 999
Q ss_pred EEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeece
Q psy17058 158 SIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGV 237 (471)
Q Consensus 158 ~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 237 (471)
.+.|..+. ......|.|....+|.+... ...+.+|+.++|.|.+ . |.+.++| ++..+.... ..+.
T Consensus 79 ~a~n~~~~-~~~~~~l~V~~~p~p~~~~~---~~~v~~G~~v~l~C~~-~--p~~~i~W--~g~~~~~~~------~~~~ 143 (265)
T 2oz4_A 79 AVILGNQS-QETLQTVTIYSFPAPNVILT---KPEVSEGTEVTVKCEA-H--PRAKVTL--NGVPAQPLG------PRAQ 143 (265)
T ss_dssp EEEETTEE-EEEEEEEEEECCCCCEEEES---CSEEETTCEEEEEEEC-C--TTSEEEE--SSCSSSCCS------SEEC
T ss_pred EEecCCCC-cEEEEEEEEeCCCCceeecC---CceecCCCcEEEEEEc-c--CCCEEEE--CCEEccCCC------CcEE
Confidence 99998776 55666777764434554432 3467899999999999 3 8899999 666642211 2456
Q ss_pred EEEeccCCCCCeEEEEEEEcCC-CceE---EEEEEEEEeCCceeeCC-CccEEecCCCcEEEEEEEeecCCCeEEEEeCC
Q psy17058 238 LRFNNIATGDEGKYTCIAENSA-GKEV---MNAYIHVLTLPAVTITP-SEYVSVRPGEPLTLECEATGRPMPTVSWVKYI 312 (471)
Q Consensus 238 l~i~~~~~~d~G~Y~C~~~~~~-~~~~---~~~~l~V~~~p~~~~~~-~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~ 312 (471)
|.|..+..+|+|.|+|.+.|.. |... ..+.|.|.++|.+.... +....+.+|+.+.|.|.+.|+|.|.+.|++++
T Consensus 144 l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~ 223 (265)
T 2oz4_A 144 LLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDG 223 (265)
T ss_dssp CEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETT
T ss_pred EEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECC
Confidence 8899999999999999998644 5543 67888998888775542 23557889999999999999999999999998
Q ss_pred ccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 313 APFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 313 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
..+... +.+ ..++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 224 ~~~~~~---------g~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 224 TFPLPI---------GES--VTVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp TEECCT---------TSC--EECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cccCCC---------CcE--EEeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 721111 111 24788999999999999999999999999875
No 63
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.97 E-value=2.3e-30 Score=242.42 Aligned_cols=263 Identities=13% Similarity=0.188 Sum_probs=175.1
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCC-CCCeEEEEeCCCCCCCC-----------Cc----------ccCcEEEEcCC
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SND-PSATIKWSKDNQEQLPP-----------NM----------IAGETLIINGI 147 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~-p~~~v~W~~~~~~~~~~-----------~~----------~~~~~L~i~~v 147 (471)
...|...|..+.+.+|+++.|.|. .+. |.+.+.|+|++. .... +. .....|.|.++
T Consensus 3 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~-~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v 81 (327)
T 2wng_A 3 ELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAG-PARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNI 81 (327)
T ss_dssp CCCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCS-TTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSC
T ss_pred eeEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCC-CCceEEEEcCCCCcceeeeecccccccCceeEEEEccC
Confidence 456677788899999999999999 665 888999999843 2210 11 13457999999
Q ss_pred CCCCCeEEEEEEEecCCce----eeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC--eEEEEeCCC
Q psy17058 148 TKADEGVYICSIQNAQGNV----FQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP--TQTWIRPDN 221 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~~~----~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~--~v~W~~~~~ 221 (471)
+.+|+|.|+|.+.|..+.. ......|.|.....+.....+ ...+.+|+.++|.|.+ .+.|++ .++|++++.
T Consensus 82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~--~~~~~~g~~~~l~C~~-~g~p~~~~~v~W~k~g~ 158 (327)
T 2wng_A 82 TPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGP--AARATPQHTVSFTCES-HGFSPRDITLKWFKNGN 158 (327)
T ss_dssp CGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECC--SSCBCTTCEEEEEEEE-EEEBSSCCEEEEEETTE
T ss_pred ccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeecc--ccccCCCCEEEEEEEE-eCccCCCcEEEEEECCE
Confidence 9999999999999976531 123345666533222222222 3467899999999999 455443 999999987
Q ss_pred CCCcCCCc-------eEEeeeceEEEeccCCCCCeEEEEEEEcCCCc---eEEEEEE--EEEeCCceeeCCCccEEecCC
Q psy17058 222 DGKFGPDV-------EVYQELGVLRFNNIATGDEGKYTCIAENSAGK---EVMNAYI--HVLTLPAVTITPSEYVSVRPG 289 (471)
Q Consensus 222 ~~~~~~~~-------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l--~V~~~p~~~~~~~~~~~~~~g 289 (471)
.+...... ......+.|.|.....+|.|.|+|.+.|..+. ......+ .+..+|.+.+.+.. +.+|
T Consensus 159 ~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~---~~~G 235 (327)
T 2wng_A 159 ELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP---VRAE 235 (327)
T ss_dssp ECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC---CSST
T ss_pred EccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC---cCCC
Confidence 65432211 11111345778777777789999999998765 2334443 34567776665432 7799
Q ss_pred CcEEEEEEEeec-CCC-eEEEEeCCccCCCccc--c-cc----cCceeEEEEeecCCCCCeEEEEEEEcCCCce-EEEEE
Q psy17058 290 EPLTLECEATGR-PMP-TVSWVKYIAPFDRNLE--R-DE----LTSRAVYTIASVRESDAGQYKCIGKNSAGTE-EKVIT 359 (471)
Q Consensus 290 ~~v~l~C~~~g~-p~~-~i~W~~~~~~~~~~~~--~-~~----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~ 359 (471)
+.+.|.|.+.|. |++ .+.|+++|..+..... . .. ......|.|..+..+|+|.|+|.|.|..|.. ++++.
T Consensus 236 ~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~ 315 (327)
T 2wng_A 236 NQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHD 315 (327)
T ss_dssp TCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEEEE
T ss_pred CcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhheE
Confidence 999999999995 444 8999999988753210 0 01 1122568899999999999999999999876 44444
Q ss_pred E
Q psy17058 360 V 360 (471)
Q Consensus 360 l 360 (471)
+
T Consensus 316 ~ 316 (327)
T 2wng_A 316 L 316 (327)
T ss_dssp C
T ss_pred E
Confidence 3
No 64
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.97 E-value=1.3e-30 Score=254.37 Aligned_cols=314 Identities=16% Similarity=0.237 Sum_probs=212.4
Q ss_pred eeeccceEEEEecCcEEEEEEeeeCC-----ccEEEeccc--hh-----------------------------h------
Q psy17058 40 VSAENHEVTVYEGGDAELKCNTYYAP-----GRWMWLNFY--SF-----------------------------L------ 77 (471)
Q Consensus 40 ~~~~~~~~~v~~g~~~~l~C~~~~~~-----~~~~w~~~~--~~-----------------------------~------ 77 (471)
+...++.+.+.+|+.++|.|.+...+ ..+.|++.. .. |
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVE 83 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCC
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCc
Confidence 45567889999999999999987555 379998742 00 0
Q ss_pred ---hheeeeeeeecC----------------CCCcEEEcCCceeecCCCcEEEEee-CC-CCCC-eEEEEeCCCCCCCCC
Q psy17058 78 ---SLIIICLAYLSP----------------QANEVQVTPRQQSAPEGSQVTIECK-SN-DPSA-TIKWSKDNQEQLPPN 135 (471)
Q Consensus 78 ---~~~~~c~~~~~~----------------~~~~v~~~p~~~~v~~G~~v~l~C~-~~-~p~~-~v~W~~~~~~~~~~~ 135 (471)
...|.|.+.... .+|.+.+.+....+.+|+.+.|.|. .+ .|.+ .+.|+++ +..+...
T Consensus 84 ~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~-g~~~~~~ 162 (438)
T 1qgc_4 84 ADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKID-GSERQNG 162 (438)
T ss_dssp GGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEET-TEEECTT
T ss_pred CcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEEC-CEEcCCC
Confidence 013678775321 2455555443334456889999999 44 6766 8999998 5554433
Q ss_pred -cc-------------cCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEE
Q psy17058 136 -MI-------------AGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADI 201 (471)
Q Consensus 136 -~~-------------~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L 201 (471)
.. ..+.|.|.+++.+|+|.|+|.|.|..+. .. ..+.+.....+.. +..+....+.+|+.++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~-~~--~~~~~~~~~~~~~-~~~~~~~~v~~G~~v~L 238 (438)
T 1qgc_4 163 VLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST-SP--IVKSFNRNECEVM-LVESGGGLVKPGGSLKL 238 (438)
T ss_dssp EEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS-SC--EEEEEETTC-CCE-EEEECCEEECTTCCEEE
T ss_pred ceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccC-Cc--eecccccccceeE-EecCCceEEecCCcEEE
Confidence 10 1347999999999999999999998766 32 2333332222222 22233557889999999
Q ss_pred EEEccCCCC--CCeEEEEeC--CCCCC-----------------cCCCceEEee----eceEEEeccCCCCCeEEEEEEE
Q psy17058 202 QCVLEAGEP--SPTQTWIRP--DNDGK-----------------FGPDVEVYQE----LGVLRFNNIATGDEGKYTCIAE 256 (471)
Q Consensus 202 ~C~~~~~~p--~~~v~W~~~--~~~~~-----------------~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~ 256 (471)
.|.+ .+.| .+.+.|+|+ +..+. ...++.+..+ ...|.|.+++.+|+|.|+|.+.
T Consensus 239 ~C~~-~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 317 (438)
T 1qgc_4 239 SCTA-SGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRR 317 (438)
T ss_dssp EEEE-ESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEEC
T ss_pred EEEE-cccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEE
Confidence 9999 6666 579999997 33211 1234444332 3379999999999999999999
Q ss_pred cCCC-----ceEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeCCccCCCcc--cc--
Q psy17058 257 NSAG-----KEVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKYIAPFDRNL--ER-- 321 (471)
Q Consensus 257 ~~~~-----~~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~~~~~~~~~--~~-- 321 (471)
|..+ .......|.|.. +|.+...+. ...+.+|+.+.|.|.+.|. |.+ .+.|++++..+.... ..
T Consensus 318 n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~ 396 (438)
T 1qgc_4 318 EDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAP-GSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQ 396 (438)
T ss_dssp CSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECC-CGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEE
T ss_pred ccCCCccceeeCCCEEEEEecCCCCCCeEEEcCc-ccccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCcccc
Confidence 8433 222345666653 444443332 2246689999999999996 887 999999998765211 10
Q ss_pred -cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy17058 322 -DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVA 361 (471)
Q Consensus 322 -~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 361 (471)
......+.|.|.++..+| |.|+|.|.|..|.......|.
T Consensus 397 ~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i~ 436 (438)
T 1qgc_4 397 SDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 436 (438)
T ss_dssp TTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEECC
T ss_pred CCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeecC
Confidence 111223479999999889 999999999999877665543
No 65
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.96 E-value=5.2e-28 Score=222.46 Aligned_cols=240 Identities=20% Similarity=0.318 Sum_probs=182.1
Q ss_pred CeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeEEEEe-CCCCCCcC-CCceEEe---eeceEEEeccCCCCCeEEEEE
Q psy17058 181 PRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQTWIR-PDNDGKFG-PDVEVYQ---ELGVLRFNNIATGDEGKYTCI 254 (471)
Q Consensus 181 p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~-~~~~~~~~-~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~ 254 (471)
+.+.+.+. ...+.+|+.++|.|.+ .+.+ .+.+.|++ ++..+... .++.+.. ....|.|.+++.+|+|.|+|.
T Consensus 3 ~~v~~~p~-~~~v~~G~~v~l~C~~-~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (291)
T 1qz1_A 3 LQVDIVPS-QGEISVGESKFFLCQV-AGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV 80 (291)
T ss_dssp CCEEEESS-SEEEETTCCEEEEEEE-SSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred cceEecCC-CceEeCCCeEEEEEEe-CCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEE
Confidence 34444443 4578899999999999 5554 68999999 66554322 3333322 245899999999999999999
Q ss_pred EEcCCCc-eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc-cccccCceeEEEE
Q psy17058 255 AENSAGK-EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL-ERDELTSRAVYTI 332 (471)
Q Consensus 255 ~~~~~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~-~~~~~~~~~~l~i 332 (471)
+.|..+. .+..+.|.|..+|.+...+. ...+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ..........|.|
T Consensus 81 ~~n~~g~~~~~~~~l~v~~~~~~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i 159 (291)
T 1qz1_A 81 VTAEDGTQSEATVNVKIFQKLMFKNAPT-PQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQI 159 (291)
T ss_dssp EECTTSCEEEEEEEEEEECCSEEEECCS-SEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEE
T ss_pred EEcCCCCeeEEEEEEEeeccccccCCCC-cccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEE
Confidence 9998754 56778888888887766653 4678899999999999999999999999998765321 1112234568999
Q ss_pred eecCCCCCeEEEEEEEcCCCce--EEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeee
Q psy17058 333 ASVRESDAGQYKCIGKNSAGTE--EKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSV 410 (471)
Q Consensus 333 ~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~ 410 (471)
.++..+|+|.|+|.|.|..+.. ...+.|.|..+
T Consensus 160 ~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~--------------------------------------------- 194 (291)
T 1qz1_A 160 RGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVP--------------------------------------------- 194 (291)
T ss_dssp TTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEE---------------------------------------------
T ss_pred ccCccccCeEEEEEEEecCCCceeeEEEEEEEecC---------------------------------------------
Confidence 9999999999999999976543 34566766653
Q ss_pred cCCeeEEcCC--eeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCce----EE----ecCeEEECCCC
Q psy17058 411 EPPRITLRPV--RQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHV----VE----YNGELRLGPHK 470 (471)
Q Consensus 411 ~~p~~~~~~~--~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~----~~----~~~~l~i~~~~ 470 (471)
|.+...+. ...+.+|+.+.|.|.+.|.|.|.++|+|||.+|..+. ++ .+++|.|.+++
T Consensus 195 --p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 262 (291)
T 1qz1_A 195 --PTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVD 262 (291)
T ss_dssp --EEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCC
T ss_pred --CcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecC
Confidence 56655433 4578899999999999999999999999999987654 22 24679998875
No 66
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.96 E-value=7.1e-28 Score=238.89 Aligned_cols=313 Identities=14% Similarity=0.198 Sum_probs=198.9
Q ss_pred cCCceeecCCCcEEEEee-CCCCC----CeEEEEeCC-CCCC------------------CCCcc-------cCcEEEEc
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDPS----ATIKWSKDN-QEQL------------------PPNMI-------AGETLIIN 145 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p~----~~v~W~~~~-~~~~------------------~~~~~-------~~~~L~i~ 145 (471)
+|..+.+.+|++++|.|. .+.+. ..+.||++. +... ..+.. ...+|.|.
T Consensus 6 qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 85 (512)
T 1zvo_C 6 ESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLR 85 (512)
T ss_pred CCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEEC
Confidence 466788999999999999 54332 679999862 1110 11111 13589999
Q ss_pred CCCCCCCeEEEEEEEecCC----------c--eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC
Q psy17058 146 GITKADEGVYICSIQNAQG----------N--VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS 211 (471)
Q Consensus 146 ~v~~~D~G~Y~C~~~~~~~----------~--~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~ 211 (471)
+++.+|+|.|+|.+.+..+ . .......|.|.. ..+|.+....+.......|+.++|.|.+....|.
T Consensus 86 ~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~ 165 (512)
T 1zvo_C 86 SMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPT 165 (512)
T ss_pred cCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeecC
Confidence 9999999999999987642 1 012334556552 1245544222211102246899999999555576
Q ss_pred C-eEEEEeCCCCCCcCCC--c----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEE-----------EEEEEeC
Q psy17058 212 P-TQTWIRPDNDGKFGPD--V----EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNA-----------YIHVLTL 273 (471)
Q Consensus 212 ~-~v~W~~~~~~~~~~~~--~----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~-----------~l~V~~~ 273 (471)
+ .++|++++........ . ..+...+.|.|.....+ .|.|+|.+.|..+.....+ .+.+..+
T Consensus 166 p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~p 244 (512)
T 1zvo_C 166 SVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQ 244 (512)
T ss_pred ceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCC
Confidence 5 9999997543211100 0 01111345888887777 9999999999877654433 2344322
Q ss_pred ----------------------------------------------------CceeeCCCccEEecCCCcEEEEEEEeec
Q psy17058 274 ----------------------------------------------------PAVTITPSEYVSVRPGEPLTLECEATGR 301 (471)
Q Consensus 274 ----------------------------------------------------p~~~~~~~~~~~~~~g~~v~l~C~~~g~ 301 (471)
|.+.+.++....+.+|+.+.|.|.+.|+
T Consensus 245 p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~ 324 (512)
T 1zvo_C 245 PQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGS 324 (512)
T ss_pred CchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEece
Confidence 3333333333345679999999999985
Q ss_pred -CC-CeEEEEeCCccCCCccc--------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe-cCCCCCC
Q psy17058 302 -PM-PTVSWVKYIAPFDRNLE--------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVE-HRPEYGP 370 (471)
Q Consensus 302 -p~-~~i~W~~~~~~~~~~~~--------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-~~p~~~~ 370 (471)
|+ ..++|++++..+..... .......+.|.|.....+|.|.|+|.|.|..+... ...+... ...
T Consensus 325 ~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~---- 399 (512)
T 1zvo_C 325 DLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQ---- 399 (512)
T ss_pred ECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCC----
Confidence 43 38999999987652110 00112235799999999999999999999987653 2222221 110
Q ss_pred CCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEE-EEEEecccCCc--eEEEe
Q psy17058 371 ISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIAN-IRCSAIGATPI--SIRWQ 447 (471)
Q Consensus 371 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~-l~C~~~g~p~~--~v~W~ 447 (471)
...+|.+.+.+... .|+.+. |.|.+.|++++ .|+|+
T Consensus 400 --------------------------------------~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~ 438 (512)
T 1zvo_C 400 --------------------------------------APVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWL 438 (512)
T ss_pred --------------------------------------CCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEE
Confidence 00146665554333 799999 99999996554 68999
Q ss_pred cCCCCCCCc
Q psy17058 448 PLQGYFPSH 456 (471)
Q Consensus 448 ~~g~~l~~~ 456 (471)
|||+++..+
T Consensus 439 k~g~~~~~~ 447 (512)
T 1zvo_C 439 EDQREVNTS 447 (512)
T ss_pred ECCeECcCc
Confidence 999998654
No 67
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.96 E-value=2.5e-28 Score=224.62 Aligned_cols=240 Identities=22% Similarity=0.327 Sum_probs=179.7
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEe-CCCCCCcCCCceEEeee--ceEEEeccCCCCCeEEEEEEE
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIR-PDNDGKFGPDVEVYQEL--GVLRFNNIATGDEGKYTCIAE 256 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~ 256 (471)
+|.+.+.+ ....+.+|+.++|.|.+ .+.|. .+.|++ ++..+....++.+...+ ..|.|.+++.+|+|.|+|.+.
T Consensus 4 ~p~v~~~~-~~~~v~~G~~v~l~C~~-~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~ 80 (291)
T 2wim_A 4 LLQVTISL-SKVELSVGESKFFTCTA-IGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQAT 80 (291)
T ss_dssp CCEEEESC-SEEEEETTCCEEEEEEE-ESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CceEEEec-cceEecCCCcEEEEEEE-eCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEe
Confidence 45555554 35678999999999999 56664 999999 55554445555554432 479999999999999999999
Q ss_pred cCCCce-EEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCc-ccccccCceeEEEEee
Q psy17058 257 NSAGKE-VMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRN-LERDELTSRAVYTIAS 334 (471)
Q Consensus 257 ~~~~~~-~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~-~~~~~~~~~~~l~i~~ 334 (471)
|..+.. +..+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+... ...........|.|.+
T Consensus 81 n~~g~~~~~~~~l~v~~~~~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~ 159 (291)
T 2wim_A 81 DAKGQTQEATVVLEIYQKLTFREVV-SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILN 159 (291)
T ss_dssp CSSSCEEEEEEEEEEECCCBCCSCC-CSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETT
T ss_pred cccCceEEEEEEEEecCCcceEeCC-CChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEe
Confidence 987765 567788888877765544 3467899999999999999999999999998876532 1111223456799999
Q ss_pred cCCCCCeEEEEEEEcCCCce--EEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecC
Q psy17058 335 VRESDAGQYKCIGKNSAGTE--EKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEP 412 (471)
Q Consensus 335 ~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~ 412 (471)
+..+|+|.|+|.|.|..+.. ...+.|.+..+
T Consensus 160 v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~----------------------------------------------- 192 (291)
T 2wim_A 160 INKSDEGIYRCEGRVEARGEIDFRDIIVIVNVP----------------------------------------------- 192 (291)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBC-----------------------------------------------
T ss_pred cchhhCEEEEEEEEECCCCeeEEeeEEEEeccC-----------------------------------------------
Confidence 99999999999999988654 34566677664
Q ss_pred CeeEEcCC--eeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEE----ecCeEEECCCC
Q psy17058 413 PRITLRPV--RQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVE----YNGELRLGPHK 470 (471)
Q Consensus 413 p~~~~~~~--~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~----~~~~l~i~~~~ 470 (471)
|.+...+. ...+.+|+.+.|.|.+.|.|.|.++|+|||..|..+.++ .+++|.|.+++
T Consensus 193 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~ 256 (291)
T 2wim_A 193 PAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNII 256 (291)
T ss_dssp CCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESCC
T ss_pred CccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeCC
Confidence 34443333 356788999999999999999999999999998765433 35678888764
No 68
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.96 E-value=1.4e-28 Score=240.29 Aligned_cols=307 Identities=15% Similarity=0.190 Sum_probs=200.0
Q ss_pred eccceEEEEecCcEEEEEEeeeC---CccEEEeccc--hh-----------------------h-----------h----
Q psy17058 42 AENHEVTVYEGGDAELKCNTYYA---PGRWMWLNFY--SF-----------------------L-----------S---- 78 (471)
Q Consensus 42 ~~~~~~~v~~g~~~~l~C~~~~~---~~~~~w~~~~--~~-----------------------~-----------~---- 78 (471)
..+..+.+.+|+.++|.|.+... ...+.|++.. .. + .
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (444)
T 1igt_B 5 QESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMS 84 (444)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEEC
Confidence 34567899999999999999854 3578886531 00 0 0
Q ss_pred -------heeeeeeeecC-------------------CCCcEEEcCCceeecCCCcEEEEee-CC-CCCC-eEEEEeCCC
Q psy17058 79 -------LIIICLAYLSP-------------------QANEVQVTPRQQSAPEGSQVTIECK-SN-DPSA-TIKWSKDNQ 129 (471)
Q Consensus 79 -------~~~~c~~~~~~-------------------~~~~v~~~p~~~~v~~G~~v~l~C~-~~-~p~~-~v~W~~~~~ 129 (471)
..|.|.+.... .+|.+...+....+.+|+.++|.|. .+ .|.+ .+.|+++ +
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~-~ 163 (444)
T 1igt_B 85 RLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSG-S 163 (444)
T ss_dssp SCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGG-T
T ss_pred CCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecC-C
Confidence 12578765321 1233333333334579999999999 54 4665 9999999 4
Q ss_pred CCCC----CC------cccCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEe----------------eccCCee
Q psy17058 130 EQLP----PN------MIAGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVD----------------KREMPRI 183 (471)
Q Consensus 130 ~~~~----~~------~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~----------------~~~~p~~ 183 (471)
..+. .. ....+.|.|.+++.+| |.|+|.|.|..+. ......+.+. ...+|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v 241 (444)
T 1igt_B 164 LSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS-TKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSV 241 (444)
T ss_dssp BCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTT-EEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEE
T ss_pred CCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCC-cceEEEeccCCCCcccCCccccCCcccCCCceE
Confidence 3321 00 0123579999999999 9999999998876 3333333321 1124555
Q ss_pred eecCCCcee-EEcCCeEEEEEEccCCC---C-CCeEEEEeCCCCCCcCCCc--eE-----EeeeceEEEeccCCCCCeEE
Q psy17058 184 RIHPNASQT-FIVGDRADIQCVLEAGE---P-SPTQTWIRPDNDGKFGPDV--EV-----YQELGVLRFNNIATGDEGKY 251 (471)
Q Consensus 184 ~~~~~~~~~-v~~g~~~~L~C~~~~~~---p-~~~v~W~~~~~~~~~~~~~--~~-----~~~~~~l~i~~~~~~d~G~Y 251 (471)
.+.++.... +.+|+.++|.|.+. +. | .+.++|++++..+...... .. ....+.|.|.++..+|+|.|
T Consensus 242 ~~~~p~~~~~~~~G~~~~L~C~~~-g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y 320 (444)
T 1igt_B 242 FIFPPKIKDVLMISLSPIVTCVVV-DVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEF 320 (444)
T ss_dssp EEECCCHHHHHCTTSCCEEEEEEE-EECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEE
T ss_pred EecCCchhheeecCCCcEEEEEEe-ecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcE
Confidence 444443333 57899999999994 54 3 4699999998764332111 11 12245799999999999999
Q ss_pred EEEEEcCCCceEEEEEE----EEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccCCCccccc---
Q psy17058 252 TCIAENSAGKEVMNAYI----HVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPFDRNLERD--- 322 (471)
Q Consensus 252 ~C~~~~~~~~~~~~~~l----~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~~~~~~~~--- 322 (471)
+|.|.|..+.......+ .+..+|.+.+.+.....+..| .+.|.|.+.| +|.+ .+.|+++|..+.......
T Consensus 321 ~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~ 399 (444)
T 1igt_B 321 KCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVL 399 (444)
T ss_dssp EEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEE
T ss_pred EEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCCEEEEEECCEEcccccccccee
Confidence 99999987765322333 345677776654332233444 5999999998 5665 899999998874321100
Q ss_pred ----ccCceeEEEEeecCCCCCeEEEEEEEcCCCc
Q psy17058 323 ----ELTSRAVYTIASVRESDAGQYKCIGKNSAGT 353 (471)
Q Consensus 323 ----~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 353 (471)
.....+.|.|.....+|.|.|+|.|.|....
T Consensus 400 ~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l~ 434 (444)
T 1igt_B 400 DSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLH 434 (444)
T ss_dssp CTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTSG
T ss_pred CCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCcC
Confidence 1112345677777778899999999998643
No 69
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.96 E-value=8.1e-29 Score=230.74 Aligned_cols=250 Identities=13% Similarity=0.156 Sum_probs=180.9
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcC
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
.+|.+. .+. ...+.+|+.++|.|.+....|.+.+.|++++..+....++.+......|.|.+++.+|+|.|+|.+.|.
T Consensus 6 ~~P~~~-~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 83 (317)
T 2y25_A 6 TGPHFV-EYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDD 83 (317)
T ss_dssp SCCEEE-EEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESS
T ss_pred CCCcEe-eee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECC
Confidence 345544 332 367889999999999844448899999999987665555555555568999999999999999999999
Q ss_pred CCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEee----------cCCCeEEEEeCCccCCCcc--cccccCc
Q psy17058 259 AGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATG----------RPMPTVSWVKYIAPFDRNL--ERDELTS 326 (471)
Q Consensus 259 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g----------~p~~~i~W~~~~~~~~~~~--~~~~~~~ 326 (471)
.+.....+.|.|...|.+...+ ....+.+|+.+.|.|.+.+ .|.+.+.|++++..+.... .......
T Consensus 84 ~g~~~~~~~l~v~~~~~~~~~~-~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 162 (317)
T 2y25_A 84 RGKDKSRLKLVDEAFKELMMEV-CKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGE 162 (317)
T ss_dssp SCEEEEEECCSTHHHHHHHHHH-HHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSS
T ss_pred CCcEEEEEEEEEecCccccccC-CceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCC
Confidence 8877766666655444332221 1234567777888887766 6888999999998876432 2222344
Q ss_pred eeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC------------CCCCCCCCCCCccccCCCcccCCCCCCC
Q psy17058 327 RAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP------------EYGPISPRPGADILPDGDEYYRPEPEEG 394 (471)
Q Consensus 327 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p------------~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 394 (471)
...|.|.+++.+|+|.|+|.|.|..|....++.|.+.... .+..
T Consensus 163 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~------------------------ 218 (317)
T 2y25_A 163 QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAE------------------------ 218 (317)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHT------------------------
T ss_pred EEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCc------------------------
Confidence 5679999999999999999999999998888888764210 0000
Q ss_pred ceEEEcCCcceEEeeecCCeeEEc-CCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEE----ecC---eEEE
Q psy17058 395 EYVYAVGSNASISCSVEPPRITLR-PVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVE----YNG---ELRL 466 (471)
Q Consensus 395 ~~~~~~~~~~~y~c~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~----~~~---~l~i 466 (471)
..+|.+... +....+.+|+.+.|.|.+.|+|.|.++|+|||..|..+.++ .++ +|.|
T Consensus 219 ---------------~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i 283 (317)
T 2y25_A 219 ---------------KNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTI 283 (317)
T ss_dssp ---------------TTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEE
T ss_pred ---------------CCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEE
Confidence 013555544 44578999999999999999999999999999999766543 213 8998
Q ss_pred CCCC
Q psy17058 467 GPHK 470 (471)
Q Consensus 467 ~~~~ 470 (471)
.+++
T Consensus 284 ~~v~ 287 (317)
T 2y25_A 284 NGVS 287 (317)
T ss_dssp BSCC
T ss_pred CCCC
Confidence 8875
No 70
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.95 E-value=5.7e-28 Score=228.28 Aligned_cols=227 Identities=18% Similarity=0.254 Sum_probs=159.7
Q ss_pred ecCCCceeEEcCCeEEEEEEccCCCC-----------CCeEEEEeCCCCCC----cC---CCceEEeeeceEEEeccCCC
Q psy17058 185 IHPNASQTFIVGDRADIQCVLEAGEP-----------SPTQTWIRPDNDGK----FG---PDVEVYQELGVLRFNNIATG 246 (471)
Q Consensus 185 ~~~~~~~~v~~g~~~~L~C~~~~~~p-----------~~~v~W~~~~~~~~----~~---~~~~~~~~~~~l~i~~~~~~ 246 (471)
..+.....+.+|+.++|.|.+ .+.| .+.+.|+|++.... .. ....+...++.|.|.+++.+
T Consensus 11 ~~~~~~v~v~~G~~v~L~C~~-~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 89 (349)
T 4dep_C 11 LDTMRQIQVFEDEPARIKCPL-FEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLN 89 (349)
T ss_dssp ECCCCCCEEETTSCEEEECTC-CCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGG
T ss_pred cceeeeEEEecCCeEEEEccc-cccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChh
Confidence 344456678999999999998 5544 48999999985321 11 23334445778999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCC---CccEEecCCCcEEEEEEE-----eecCCCeEEEEeCCccCCCc
Q psy17058 247 DEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITP---SEYVSVRPGEPLTLECEA-----TGRPMPTVSWVKYIAPFDRN 318 (471)
Q Consensus 247 d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~---~~~~~~~~g~~v~l~C~~-----~g~p~~~i~W~~~~~~~~~~ 318 (471)
|+|.|+|.+.|..+.....+.|.|..++...... .....+.+|+.+.|.|.+ .|.|.+.+.|++++..+...
T Consensus 90 D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~ 169 (349)
T 4dep_C 90 DTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNF 169 (349)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSC
T ss_pred hCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCc
Confidence 9999999999998888888899998766533221 223477899999999985 67899999999999887543
Q ss_pred ccccccCceeEEEEeecCCCCCeEEEEEEEcCC-Cce---EEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCC
Q psy17058 319 LERDELTSRAVYTIASVRESDAGQYKCIGKNSA-GTE---EKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEG 394 (471)
Q Consensus 319 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~-g~~---~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 394 (471)
.. .......|.|.+++.+|+|.|+|.|.|.. |.. +..+.|.|..++..
T Consensus 170 ~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~-------------------------- 221 (349)
T 4dep_C 170 NN--VIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKN-------------------------- 221 (349)
T ss_dssp SS--EEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGG--------------------------
T ss_pred cc--eeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCC--------------------------
Confidence 22 22334689999999999999999999987 554 56777877764210
Q ss_pred ceEEEcCCcceEEeeecCCeeEEcCCee--eeeCCCeEEEEEEec----ccCCceEEEecCCCCCCC
Q psy17058 395 EYVYAVGSNASISCSVEPPRITLRPVRQ--TVKPGDIANIRCSAI----GATPISIRWQPLQGYFPS 455 (471)
Q Consensus 395 ~~~~~~~~~~~y~c~~~~p~~~~~~~~~--~~~~g~~~~l~C~~~----g~p~~~v~W~~~g~~l~~ 455 (471)
..+|.|...+... .+.+|+.+.|.|.+. |.|.+.++|+|||..|..
T Consensus 222 ---------------~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~ 273 (349)
T 4dep_C 222 ---------------AVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDD 273 (349)
T ss_dssp ---------------CCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC----
T ss_pred ---------------CCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccc
Confidence 0146776555433 788999999999999 578899999999999876
No 71
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.95 E-value=1.2e-26 Score=214.92 Aligned_cols=250 Identities=20% Similarity=0.320 Sum_probs=184.0
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCC-cc--------cCcEEEEcCCCCCCCeEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPN-MI--------AGETLIINGITKADEGVYICS 158 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~-~~--------~~~~L~i~~v~~~D~G~Y~C~ 158 (471)
..+|.|...|..+.+.+|++++|.|. .+.|.+.+.|+++ +..+... .. ....|.|.+++.+|+|.|+|.
T Consensus 2 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 80 (305)
T 2nzi_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQ-GKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (305)
T ss_dssp CCCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEET-TEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEE
T ss_pred CCCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEEC-CEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEE
Confidence 35889999999999999999999999 7888999999999 5444322 11 123899999999999999999
Q ss_pred EEecCCceeeeeEEEEEeeccCCeeee----cCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEe-
Q psy17058 159 IQNAQGNVFQDYASIQVDKREMPRIRI----HPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQ- 233 (471)
Q Consensus 159 ~~~~~~~~~~~~~~l~v~~~~~p~~~~----~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~- 233 (471)
+.|..+. ......|.|. .+|.+.. .......+.+|+.+.|.|.+ .+.|.+.+.|++++..+....++.+..
T Consensus 81 a~n~~g~-~~~~~~l~V~--~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~ 156 (305)
T 2nzi_A 81 ATNQGGS-VSGTASLEVE--VPAKIHLPKTLEGMGAVHALRGEVVSIKIPF-SGKPDPVITWQKGQDLIDNNGHYQVIVT 156 (305)
T ss_dssp EEETTEE-EEEEEEEEEC--EEEEECCCHHHHSSCCEEEETTCCEEEEEEE-EEESCCEEEEEESSSBCCSSSSCEEEEC
T ss_pred EEcCCCC-ccceEEEEEe--cCCccCCCccccccccEEecCCCEEEEEEEE-CCCCCCEEEEEECCEECCCCCcEEEEEc
Confidence 9998776 5555556654 3333321 11234567899999999999 788999999999988766555555442
Q ss_pred -eeceEEEec-cCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEE--------------E
Q psy17058 234 -ELGVLRFNN-IATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLEC--------------E 297 (471)
Q Consensus 234 -~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C--------------~ 297 (471)
....|.|.+ +...|.|.|+|.+.|..|.....+.|.|...|...... ......+..+.|.| .
T Consensus 157 ~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~--~~~~~~~~~v~l~w~~p~~~g~~~i~~y~ 234 (305)
T 2nzi_A 157 RSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGV--KVSDVSRDSVNLTWTEPASDGGSKITNYI 234 (305)
T ss_dssp SSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEE--EEESCCSSCEEEEEECCSCCSBSCEEEEE
T ss_pred CCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCc--eeeeccCCEEEEEEcCCccCCCCceeEEE
Confidence 245799999 99999999999999999998889999998766432111 01112344444444 4
Q ss_pred EeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy17058 298 ATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEK 356 (471)
Q Consensus 298 ~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 356 (471)
+...+.+...|.+.+.. ....|.|.++...+.|.|+|.|.|..|....
T Consensus 235 v~~~~~~~~~w~~~~~~-----------~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~ 282 (305)
T 2nzi_A 235 VEKCATTAERWLRVGQA-----------RETRYTVINLFGKTSYQFRVIAENKFGLSKP 282 (305)
T ss_dssp EEEEETTSCCEEEEEEE-----------SSSEEEECSCCSSCEEEEEEEEEETTEECCC
T ss_pred EEEecCCCCccEECccc-----------cCceEEecCCCCCCeEEEEEEEEeCCcccCC
Confidence 44444444455543221 2567999999999999999999999997643
No 72
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.95 E-value=6.2e-28 Score=227.11 Aligned_cols=233 Identities=16% Similarity=0.237 Sum_probs=182.1
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccC------CCCCCeEEEEeCCCCCCcC--CCceEEeeeceEEEeccCCCCCeE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEA------GEPSPTQTWIRPDNDGKFG--PDVEVYQELGVLRFNNIATGDEGK 250 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~------~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~G~ 250 (471)
..|.+...+ ....+.+|+.++|.|.+.. +.|.+.+.|++++..+... ....+...++.|.|.+++.+|+|.
T Consensus 17 ~~p~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 95 (339)
T 3o4o_C 17 SCRFRGRHY-KREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGT 95 (339)
T ss_dssp -CEEEEECS-CCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEE
T ss_pred hhHhhCcCc-eEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEE
Confidence 345555544 4667899999999999931 7888999999999874332 234444557789999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEEeCCceeeC-CCccEEecCCCcEEEEEE-----EeecCCCeEEEEeCCccCCCcc-cccc
Q psy17058 251 YTCIAENSAGKEVMNAYIHVLTLPAVTIT-PSEYVSVRPGEPLTLECE-----ATGRPMPTVSWVKYIAPFDRNL-ERDE 323 (471)
Q Consensus 251 Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~~g~~v~l~C~-----~~g~p~~~i~W~~~~~~~~~~~-~~~~ 323 (471)
|+|.+.|..+.....+.|.|...+..... ......+.+|+.+.|.|. +.|.|.+.+.|++++..+.... ....
T Consensus 96 Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~ 175 (339)
T 3o4o_C 96 YVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLS 175 (339)
T ss_dssp EECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEE
T ss_pred EEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEE
Confidence 99999999888888889999877653211 111246789999999999 7889999999999998876442 2122
Q ss_pred cCceeEEEEeecCCCCCeEEEEEEEcCCC----ceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEE
Q psy17058 324 LTSRAVYTIASVRESDAGQYKCIGKNSAG----TEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYA 399 (471)
Q Consensus 324 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 399 (471)
......|.|.+++.+|+|.|+|.|.|..| ..+..+.|.|...+..
T Consensus 176 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~------------------------------- 224 (339)
T 3o4o_C 176 VRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEE------------------------------- 224 (339)
T ss_dssp CTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCC-------------------------------
T ss_pred cCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCC-------------------------------
Confidence 23346899999999999999999999987 4567788888765311
Q ss_pred cCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEe---cccC-CceEEEecCCCCCC
Q psy17058 400 VGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSA---IGAT-PISIRWQPLQGYFP 454 (471)
Q Consensus 400 ~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~---~g~p-~~~v~W~~~g~~l~ 454 (471)
.+|.+...+....+.+|+.+.|.|.+ .|.| ++.+.|++||.++.
T Consensus 225 -----------~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~ 272 (339)
T 3o4o_C 225 -----------TIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIE 272 (339)
T ss_dssp -----------CCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSS
T ss_pred -----------CCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecc
Confidence 25777777767889999999999999 8999 78999999999875
No 73
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.95 E-value=2.9e-27 Score=217.17 Aligned_cols=231 Identities=18% Similarity=0.203 Sum_probs=174.1
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAY 267 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 267 (471)
.....+.+|+.++|.|.+ .+ .+.|++++.... ..........|.|.+++..|+|.|+|.+.|..+..+..+.
T Consensus 11 ~~~~~v~~G~~v~L~C~~-~~----~v~W~~~~~~~~---~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 82 (289)
T 3ejj_X 11 GPELVVEPGETVTLRCVS-NG----SVEWDGPISPYW---TLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIH 82 (289)
T ss_dssp SSEEEECTTCCEEEEEEC-SS----CCEEECSCSSSS---EECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEE
T ss_pred CceEEECCCCCEEEEEEe-CC----cEEEccCCCceE---EEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEE
Confidence 345678899999999998 44 499998765421 1122233578999999999999999999988888888889
Q ss_pred EEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCe-EEEEe-CCccCCCcccccccCceeEEEEeecCCCCCeEEEE
Q psy17058 268 IHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPT-VSWVK-YIAPFDRNLERDELTSRAVYTIASVRESDAGQYKC 345 (471)
Q Consensus 268 l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~-i~W~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 345 (471)
|.|..+|...........+.+|+++.|.|.+.+.+.+. +.|++ ++..+..... ........|.|.+++.+|+|.|+|
T Consensus 83 l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C 161 (289)
T 3ejj_X 83 LYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTV-YFFSPWRGFIIRKAKVLDSNTYVC 161 (289)
T ss_dssp EEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCC-EEEETTTEEEESSCCGGGCEEEEE
T ss_pred EEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCcc-EEECCCCCEEEeecccccCEEEEE
Confidence 99988776444334567899999999999999877664 99986 4544432222 222345679999999999999999
Q ss_pred EEE-cCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeee
Q psy17058 346 IGK-NSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTV 424 (471)
Q Consensus 346 ~a~-n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~ 424 (471)
.|. |..+..+..+.|.|...+ ..+|.+...+....+
T Consensus 162 ~a~~~~~~~~~~~~~l~V~~~~-------------------------------------------~~~p~i~~~~~~~~~ 198 (289)
T 3ejj_X 162 KTMVNGRESTSTGIWLKVNRVH-------------------------------------------PEPPQIKLEPSKLVR 198 (289)
T ss_dssp EEEETTEEEECCCEEEEEESSC-------------------------------------------CCCCEEEEESSSEEC
T ss_pred EEEeCCCccccccEEEEEEECC-------------------------------------------CCCCeEEecCCceEE
Confidence 999 555666777888887532 126889888888888
Q ss_pred eCCCeEEEEEEecc-cCCceEEEecCCCCCCCceEE--------ecCeEEECCCC
Q psy17058 425 KPGDIANIRCSAIG-ATPISIRWQPLQGYFPSHVVE--------YNGELRLGPHK 470 (471)
Q Consensus 425 ~~g~~~~l~C~~~g-~p~~~v~W~~~g~~l~~~~~~--------~~~~l~i~~~~ 470 (471)
.+|+.+.|.|.+.+ .|.+.++|+++|..+...... ..++|.|.+++
T Consensus 199 ~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 253 (289)
T 3ejj_X 199 IRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVD 253 (289)
T ss_dssp CSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCC
T ss_pred EeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeec
Confidence 89999999999998 788999999999988764332 36789988875
No 74
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.95 E-value=4.5e-26 Score=224.40 Aligned_cols=245 Identities=19% Similarity=0.328 Sum_probs=164.1
Q ss_pred cCCCcEEEEee-CCC-CC-C-eEEEEeCCCCCCCCC--------c----ccCcEEEEcCCCCCCCeEEEEEEEecCCcee
Q psy17058 104 PEGSQVTIECK-SND-PS-A-TIKWSKDNQEQLPPN--------M----IAGETLIINGITKADEGVYICSIQNAQGNVF 167 (471)
Q Consensus 104 ~~G~~v~l~C~-~~~-p~-~-~v~W~~~~~~~~~~~--------~----~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~ 167 (471)
.+|+.++|.|. .+. |. + .|.|+++ +...... . ...+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 139 ~~g~~v~L~C~~~g~~P~~p~~v~W~~~-~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~-- 215 (475)
T 1iga_A 139 QPDGNVVIACLVQGFFPQEPLSVTWSES-GQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP-- 215 (475)
T ss_pred CCCCeEEEEEEEeeecCCCceEEEEcCC-CcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCC--
Confidence 68999999999 554 65 4 9999998 4321100 0 02236889999999999999999998754
Q ss_pred eeeEEEEEeec------------------cCCeeeecCCCceeEEcCCeEEEEEEccCCCCC---CeEEEEeCCCCCCcC
Q psy17058 168 QDYASIQVDKR------------------EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS---PTQTWIRPDNDGKFG 226 (471)
Q Consensus 168 ~~~~~l~v~~~------------------~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~---~~v~W~~~~~~~~~~ 226 (471)
.....+.+.+. .+|.+.+.++....+.+|+.++|.|.+. +.++ +.++| + +..+...
T Consensus 216 ~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~-g~~p~~~~~i~W-~-~~~~~~~ 292 (475)
T 1iga_A 216 SQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLT-GLRDASGVTFTW-T-PSSGKSA 292 (475)
T ss_pred ceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEE-cccCCCceEEEE-C-CCCcCCc
Confidence 22233332221 2344444443333457999999999994 5433 69999 4 4332211
Q ss_pred CC--ce-----EEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEE---EEeCCceeeCCCccEEecCCCcEEEEE
Q psy17058 227 PD--VE-----VYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIH---VLTLPAVTITPSEYVSVRPGEPLTLEC 296 (471)
Q Consensus 227 ~~--~~-----~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~---V~~~p~~~~~~~~~~~~~~g~~v~l~C 296 (471)
.. .. .....+.|.|.++..+|+|.|+|.+.|..+.......|. +..+|.+.+.+.....+.+|+.+.|.|
T Consensus 293 ~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C 372 (475)
T 1iga_A 293 VQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTC 372 (475)
T ss_pred cccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEE
Confidence 10 00 011245799999999999999999999887754444553 356777766654433467899999999
Q ss_pred EEeec-CC-CeEEEEeCCccCCCcc------ccc------ccCceeEEEEeecCCCCCeEEEEEEEcCCCce
Q psy17058 297 EATGR-PM-PTVSWVKYIAPFDRNL------ERD------ELTSRAVYTIASVRESDAGQYKCIGKNSAGTE 354 (471)
Q Consensus 297 ~~~g~-p~-~~i~W~~~~~~~~~~~------~~~------~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 354 (471)
.+.|. |+ +.+.|+++|..+.... ... .....+.|.|.....+|.|.|+|.|.|.....
T Consensus 373 ~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~~ 444 (475)
T 1iga_A 373 LARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPL 444 (475)
T ss_pred EEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCCC
Confidence 99985 43 4999999998875431 000 11123567788878889999999999987654
No 75
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.95 E-value=2.1e-27 Score=222.46 Aligned_cols=232 Identities=16% Similarity=0.198 Sum_probs=169.6
Q ss_pred ceeEEcCCeEEEEEEccCC--------CCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCe-EEEEEEEcCCC
Q psy17058 190 SQTFIVGDRADIQCVLEAG--------EPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEG-KYTCIAENSAG 260 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~--------~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~ 260 (471)
...+.+|+.+.|.|.+... .|.+.++|+|++..+....+. ...+.|.|.+++.+|+| .|+|.+.|..|
T Consensus 38 ~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~---~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g 114 (329)
T 3oq3_B 38 NDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR---VKNGDLWIANYTSNDSHRRYLCTVTTKNG 114 (329)
T ss_dssp EEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT---EETTEEEESSCCGGGGGCCEEEEEECTTS
T ss_pred eEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce---eecceEEEcCCChHhCCCcEEEEEEeCCC
Confidence 4457899999999998432 366799999999875544333 23778999999999999 99999999887
Q ss_pred ceEEEEEEEEEe-CCceeeCCCccEEecCCCcEEEEEEEeecC-CCeEEEEeCCccCCCcccccccCceeEEEEeecCCC
Q psy17058 261 KEVMNAYIHVLT-LPAVTITPSEYVSVRPGEPLTLECEATGRP-MPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRES 338 (471)
Q Consensus 261 ~~~~~~~l~V~~-~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p-~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 338 (471)
.......+.+.. +|.+. .+.....+.+|+.+.|.|.+.|.| .+.+.|++++..+....... ......|.|.+++.+
T Consensus 115 ~~~~~~~~~v~~~~p~~~-~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~-~~~~~~L~I~~v~~~ 192 (329)
T 3oq3_B 115 DCVQGIVRSHIRKPPSCI-PETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKY-SQSGQNLIIHNPELE 192 (329)
T ss_dssp CEEEEEEEEEECCCCSCE-EEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSE-EEETTEEEECSCCGG
T ss_pred ceeeEEEEEEEcCCCcEe-ccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceE-ecCCCEEEEeecChh
Confidence 654444334443 33322 221122456799999999999999 89999999998875322111 122589999999999
Q ss_pred CCeEEEEEEEcC--CCceEEE----EEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecC
Q psy17058 339 DAGQYKCIGKNS--AGTEEKV----ITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEP 412 (471)
Q Consensus 339 d~G~Y~C~a~n~--~g~~~~~----~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~ 412 (471)
|+|.|+|.|.|. .|..... +.|.|..+|.. ..
T Consensus 193 D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~------------------------------------------~~ 230 (329)
T 3oq3_B 193 DSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDH------------------------------------------RF 230 (329)
T ss_dssp GCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCC------------------------------------------CE
T ss_pred hCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCC------------------------------------------CC
Confidence 999999999997 6654333 77888765311 01
Q ss_pred CeeEEcCCeeeeeCCCeEEEEEEecccC---Cc-eEEEecCCCCC-CCceE----------EecCeEEECCCC
Q psy17058 413 PRITLRPVRQTVKPGDIANIRCSAIGAT---PI-SIRWQPLQGYF-PSHVV----------EYNGELRLGPHK 470 (471)
Q Consensus 413 p~~~~~~~~~~~~~g~~~~l~C~~~g~p---~~-~v~W~~~g~~l-~~~~~----------~~~~~l~i~~~~ 470 (471)
|.+ .+....+.+|+.+.|.|.+.|.| ++ .+.|+|||..+ ..+.. ...++|.|.+++
T Consensus 231 ~~~--~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 301 (329)
T 3oq3_B 231 KLI--LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVT 301 (329)
T ss_dssp EEE--CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCC
T ss_pred cee--cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEecc
Confidence 233 56668899999999999999998 67 89999999985 33221 135678988875
No 76
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.95 E-value=2.7e-27 Score=219.88 Aligned_cols=249 Identities=12% Similarity=0.101 Sum_probs=177.2
Q ss_pred ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeee--ceEEEeccCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQEL--GVLRFNNIATGDEGKYTCIAENSAGKEVMNAY 267 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 267 (471)
...+.+|+.+.|.|....+.|.+.+.|+|++..+....++.+...+ ..|.|.+++.+|+|.|+|.+.|..+... +..
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~ 88 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYL 88 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEE
Confidence 3457789999999998667889999999999887766677666533 5899999999999999999999877544 555
Q ss_pred EEEEe------------CCceeeCCCccEEecCCCcEEEEEEEe-ecCCCeEEEEeCCccCCCccc--cc--ccCceeEE
Q psy17058 268 IHVLT------------LPAVTITPSEYVSVRPGEPLTLECEAT-GRPMPTVSWVKYIAPFDRNLE--RD--ELTSRAVY 330 (471)
Q Consensus 268 l~V~~------------~p~~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~i~W~~~~~~~~~~~~--~~--~~~~~~~l 330 (471)
|.|.. +|.+...+.....+.+|+.+.|.|.+. +.|.+.+.|++++..+..... .. ......+|
T Consensus 89 l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L 168 (312)
T 2y23_A 89 IDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEM 168 (312)
T ss_dssp ECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEE
T ss_pred EEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEE
Confidence 66543 566555433356889999999999999 889999999999988764321 11 12345669
Q ss_pred EEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCC-CCC-CCCccccCCCcccCCCCCCCceEEEcCCcceEEe
Q psy17058 331 TIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPI-SPR-PGADILPDGDEYYRPEPEEGEYVYAVGSNASISC 408 (471)
Q Consensus 331 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~-~~~-~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c 408 (471)
.|.+++.+|+|.|+|.|.|..+..... +.+......... .+. ......
T Consensus 169 ~i~~~~~~d~G~Y~C~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 218 (312)
T 2y23_A 169 FMEKLQDEDEGTYTFQLQDGKATNHST--VVLVGDVFKKLQKEAEFQRQEWI---------------------------- 218 (312)
T ss_dssp EESCCCGGGCEEEEEEEESSSCEEEEE--EEECTHHHHHHHHHHHHHHHHHH----------------------------
T ss_pred EEccCCcccCEeEEEEEEeCCceEEEE--EEEcchhhhhhcccccccccchh----------------------------
Confidence 999999999999999998755444433 333100000000 000 000000
Q ss_pred eecCCeeEEcCCeeeeeCCCeEEEEEEecccCCc-eEEEecCCCCCCCceEE----ecCeEEECCCC
Q psy17058 409 SVEPPRITLRPVRQTVKPGDIANIRCSAIGATPI-SIRWQPLQGYFPSHVVE----YNGELRLGPHK 470 (471)
Q Consensus 409 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~v~W~~~g~~l~~~~~~----~~~~l~i~~~~ 470 (471)
...+|.|.... ...+.+|+.+.|.|.+.|.|++ .++|+|||.+|..+.++ ..++|.|.+++
T Consensus 219 ~~~~p~~~~~~-~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~ 284 (312)
T 2y23_A 219 RKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFS 284 (312)
T ss_dssp HHHSSEEEEEE-EEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCS
T ss_pred hccCCceeecc-eEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCC
Confidence 01246766443 3788899999999999999998 99999999998754433 22588888875
No 77
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.95 E-value=8.6e-27 Score=218.46 Aligned_cols=243 Identities=22% Similarity=0.360 Sum_probs=179.7
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCC----CCCeEEEEeCCCCC-----------------CcCCCceEE---eee
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGE----PSPTQTWIRPDNDG-----------------KFGPDVEVY---QEL 235 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~----p~~~v~W~~~~~~~-----------------~~~~~~~~~---~~~ 235 (471)
+|...+..+....+.+|+.++|.|.+ .+. +.+.+.|++++... ....++.+. ...
T Consensus 13 ~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 91 (331)
T 3u83_A 13 DPSQVVQVNDSMYGFIGTDVVLHCSF-ANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTD 91 (331)
T ss_dssp --------CEEEEEETTCCEEECCBC-SSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSB
T ss_pred CCcceEEcCCcEEEEecCCEEEeeec-CCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCC
Confidence 34444555556788999999999998 443 44579999965220 122333322 124
Q ss_pred ceEEEeccCCCCCeEEEEE-EEcCCCceEEEEEEEEEeCCceeeC-CCccEEecCC---CcEEEEEE-EeecCCCeEEEE
Q psy17058 236 GVLRFNNIATGDEGKYTCI-AENSAGKEVMNAYIHVLTLPAVTIT-PSEYVSVRPG---EPLTLECE-ATGRPMPTVSWV 309 (471)
Q Consensus 236 ~~l~i~~~~~~d~G~Y~C~-~~~~~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~~g---~~v~l~C~-~~g~p~~~i~W~ 309 (471)
..|.|.+++.+|+|.|+|. +.+..+.....+.|.|..+|.+.+. ......+.+| +.+.|.|. +.+.|.+.+.|+
T Consensus 92 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~ 171 (331)
T 3u83_A 92 GTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWE 171 (331)
T ss_dssp CCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEE
T ss_pred ceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEE
Confidence 6799999999999999998 5555667788889999988877543 3345678888 77999998 788999999999
Q ss_pred eCCccCCCcc----cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCc
Q psy17058 310 KYIAPFDRNL----ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDE 385 (471)
Q Consensus 310 ~~~~~~~~~~----~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~ 385 (471)
+++....... ........+.|.|..+..+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~-------------------- 231 (331)
T 3u83_A 172 TRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYE-------------------- 231 (331)
T ss_dssp ESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEE--------------------
T ss_pred cCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecC--------------------
Confidence 9643322111 1111223467889999999999999999999999888889888764
Q ss_pred ccCCCCCCCceEEEcCCcceEEeeecCCeeEEcC-CeeeeeCCCeEEEEEEecccCCce-EEEecCCCCCCCceEEecCe
Q psy17058 386 YYRPEPEEGEYVYAVGSNASISCSVEPPRITLRP-VRQTVKPGDIANIRCSAIGATPIS-IRWQPLQGYFPSHVVEYNGE 463 (471)
Q Consensus 386 w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~g~~l~~~~~~~~~~ 463 (471)
|.+...+ ....+.+|+.+.|.|.+.|+|.|. ++|+|+|..+..+....+++
T Consensus 232 ---------------------------P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~ 284 (331)
T 3u83_A 232 ---------------------------PEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRT 284 (331)
T ss_dssp ---------------------------EEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTE
T ss_pred ---------------------------CeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccceecCcE
Confidence 5555443 346688999999999999999998 99999999999888888999
Q ss_pred EEEC-CCC
Q psy17058 464 LRLG-PHK 470 (471)
Q Consensus 464 l~i~-~~~ 470 (471)
|.|. +++
T Consensus 285 L~i~~~v~ 292 (331)
T 3u83_A 285 LFFKGPIN 292 (331)
T ss_dssp EEECSCCC
T ss_pred EEEeCCCc
Confidence 9998 665
No 78
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.95 E-value=2.1e-28 Score=229.81 Aligned_cols=237 Identities=21% Similarity=0.336 Sum_probs=114.5
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAY 267 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 267 (471)
+....+.+|+.++|.|.+....|.+.+.|+|++..+....++.+ .++.|.|.+++.+|+|.|+|.+.|. +.....+.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~ 91 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV--GPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFS 91 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEe--ccceEEEeecccccCEEEEEEEEeC-CeEEEEEE
Confidence 44567889999999999944446789999999987655544433 3578999999999999999999998 66667777
Q ss_pred EEEEeCCce---------------------eeCC----CccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--
Q psy17058 268 IHVLTLPAV---------------------TITP----SEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE-- 320 (471)
Q Consensus 268 l~V~~~p~~---------------------~~~~----~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~-- 320 (471)
|.|...+.. ...+ .....+.+|+.+.|.|.+.|.|.+.+.|++++..+.....
T Consensus 92 l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~ 171 (334)
T 1ry7_B 92 VRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIG 171 (334)
T ss_dssp ---------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTT
T ss_pred EEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECccccccc
Confidence 777654321 1111 1124678999999999999999999999999988764322
Q ss_pred -ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEE
Q psy17058 321 -RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYA 399 (471)
Q Consensus 321 -~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 399 (471)
.........|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+..
T Consensus 172 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~------------------------------- 220 (334)
T 1ry7_B 172 GIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPH------------------------------- 220 (334)
T ss_dssp CCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCS-------------------------------
T ss_pred ceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCC-------------------------------
Confidence 122345568999999999999999999999999999999999875311
Q ss_pred cCCcceEEeeecCCeeEE-cCCeeeeeCCCeEEEEEEecccCCceEEEec----CCCCCCCceEE-----e---------
Q psy17058 400 VGSNASISCSVEPPRITL-RPVRQTVKPGDIANIRCSAIGATPISIRWQP----LQGYFPSHVVE-----Y--------- 460 (471)
Q Consensus 400 ~~~~~~y~c~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~----~g~~l~~~~~~-----~--------- 460 (471)
+|.+.. .+....+.+|+.+.|.|.+.|.|.+.++|+| ||..+..+... .
T Consensus 221 ------------~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 288 (334)
T 1ry7_B 221 ------------RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDK 288 (334)
T ss_dssp ------------SCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCT
T ss_pred ------------CCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccc
Confidence 244433 2455788999999999999999999999999 78877644221 1
Q ss_pred -cCeEEECCCC
Q psy17058 461 -NGELRLGPHK 470 (471)
Q Consensus 461 -~~~l~i~~~~ 470 (471)
.++|.|.+++
T Consensus 289 ~~~~L~i~~v~ 299 (334)
T 1ry7_B 289 ELEVLSLHNVT 299 (334)
T ss_dssp TCCCEEECSCC
T ss_pred cccEEEEccCC
Confidence 1379988875
No 79
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.95 E-value=1.2e-26 Score=215.85 Aligned_cols=234 Identities=19% Similarity=0.359 Sum_probs=173.2
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCC-----eEEEEeCCCCCCc-------------CCCceEE-------eeeceEEEec
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSP-----TQTWIRPDNDGKF-------------GPDVEVY-------QELGVLRFNN 242 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~-----~v~W~~~~~~~~~-------------~~~~~~~-------~~~~~l~i~~ 242 (471)
+....+..|++++|.|.+ .+.+.+ .++|+|++..... ..+..+. ..+.+|.|.+
T Consensus 7 P~~v~~~~G~~v~L~C~v-~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 85 (313)
T 4fqp_A 7 PTQVPGFLGDSVTLPCYL-QVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFG 85 (313)
T ss_dssp CSEECCBTTSCEEECCEE-ECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECS
T ss_pred CCEEEEecCCCEEEEEEE-ECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECc
Confidence 345567789999999998 444433 5999998864321 1111111 1235699999
Q ss_pred cCCCCCeEEEEEEEc-CCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEe-ecCCCeEEEEeCCccCCCccc
Q psy17058 243 IATGDEGKYTCIAEN-SAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEAT-GRPMPTVSWVKYIAPFDRNLE 320 (471)
Q Consensus 243 ~~~~d~G~Y~C~~~~-~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~i~W~~~~~~~~~~~~ 320 (471)
++.+|+|.|+|.+.+ ..+..+..+.|.+...|.+...+. ...+..|+.+.+.|.+. +.|.+.+.|++++..+.....
T Consensus 86 v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~-~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~ 164 (313)
T 4fqp_A 86 LRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQ-KVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQ 164 (313)
T ss_dssp CCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEEC-CBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEE
T ss_pred CChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceeccc-ceEeecCceEEEEEEccCccCCcEEEeecCCccccccce
Confidence 999999999998864 455667778888888887665433 34567788899999875 689999999999887653221
Q ss_pred cc-----ccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEE--EEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCC
Q psy17058 321 RD-----ELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKV--ITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEE 393 (471)
Q Consensus 321 ~~-----~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~ 393 (471)
.. .....+.|.|.....+|+|.|+|.|.|..+..... +.|.|..
T Consensus 165 ~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~----------------------------- 215 (313)
T 4fqp_A 165 VPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYY----------------------------- 215 (313)
T ss_dssp EECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCE-----------------------------
T ss_pred eeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeeccccc-----------------------------
Confidence 11 11223568999999999999999999988766444 4555544
Q ss_pred CceEEEcCCcceEEeeecCCeeEEcCCe-eeeeCCCeEEEEEEecccCCc-eEEEecCCCCCCCceEEecCeEEECCCC
Q psy17058 394 GEYVYAVGSNASISCSVEPPRITLRPVR-QTVKPGDIANIRCSAIGATPI-SIRWQPLQGYFPSHVVEYNGELRLGPHK 470 (471)
Q Consensus 394 ~~~~~~~~~~~~y~c~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~l~i~~~~ 470 (471)
+|.+.+.+.. ..+.+|+.+.|.|.+.|+|.| .|+|+|||.+|.......+++|.|.+++
T Consensus 216 ------------------~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~v~ 276 (313)
T 4fqp_A 216 ------------------PPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRPVD 276 (313)
T ss_dssp ------------------EEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECCCS
T ss_pred ------------------CCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeCCEEEECcCC
Confidence 4677655444 566778999999999999998 7999999999999888889999999876
No 80
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.4e-26 Score=212.85 Aligned_cols=232 Identities=15% Similarity=0.184 Sum_probs=177.1
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcC
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
.+|.+.. ......+.+|+.++|.|.+ .+ .+.|++++..+ ......++.|.|.+++.+|+|.|+|.+.|
T Consensus 11 ~~P~i~~-~~~~~~v~~G~~v~l~C~~-~~----~i~W~~~~~~~-----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n- 78 (290)
T 2o26_X 11 SPPSIHP-AQSELIVEAGDTLSLTCID-PD----FVRWTFKTYFN-----EMVENKKNEWIQEKAEATRTGTYTCSNSN- 78 (290)
T ss_dssp -CCEESS-CSSEEEEETTSCEEEEEEC-TT----EEEEEEECSSS-----CEEEECSSEEEETTCCGGGCEEEEEEESS-
T ss_pred CCCEEeC-CCCeEEEcCCCcEEEEECC-CC----cEEEecCCcce-----eeecCCCceEEEeccCHHhCeEEEEEeeC-
Confidence 4455543 3445678899999999998 44 89999999875 12223357899999999999999999998
Q ss_pred CCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCC-CeEEE-EeCCccCCCcccccccCceeEEEEeecC
Q psy17058 259 AGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPM-PTVSW-VKYIAPFDRNLERDELTSRAVYTIASVR 336 (471)
Q Consensus 259 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~-~~i~W-~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 336 (471)
+. ...+.|.|..+|.+... .....+.+|+.+.|.|.+.+ |. +.+.| ++++..+..... ........|.|.+++
T Consensus 79 -g~-~~~~~l~V~~~~~~~~~-~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~-~~~~~~~~L~i~~v~ 153 (290)
T 2o26_X 79 -GL-TSSIYVFVRDPAKLFLV-GLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLT-FVPNPKAGITIKNVK 153 (290)
T ss_dssp -SC-EEEEEEEEECSSCCBCC-CCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCE-EEEETTTEEEEESCC
T ss_pred -Cc-cEEEEEEEeCCCccccc-ccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCc-eeeCCCCCEEEeccc
Confidence 33 77788999888776643 34578889999999999995 77 89999 567777654322 122334589999999
Q ss_pred CCCCe-EEEEEEEcCCCceE-EEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCe
Q psy17058 337 ESDAG-QYKCIGKNSAGTEE-KVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPR 414 (471)
Q Consensus 337 ~~d~G-~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~ 414 (471)
.+|+| .|+|.|.|..+... ..+.|.|...+ ..+|.
T Consensus 154 ~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~-------------------------------------------~~~P~ 190 (290)
T 2o26_X 154 RAYHRLCVRCAAQRDGTWLHSDKFTLKVREAI-------------------------------------------KAIPV 190 (290)
T ss_dssp GGGTTCEEEEEEEETTEEEECCCEEEEEECCC-------------------------------------------CSCCE
T ss_pred HHHCCCEEEEEEEECCceEEeEEEEEEEEeCC-------------------------------------------CCCCc
Confidence 99999 99999999865533 35778877432 13688
Q ss_pred eEEcCCeeeeeCCCeEEEEEEecccCCce-EEEecCCCCC----CCc---------eEEecCeEEECCCC
Q psy17058 415 ITLRPVRQTVKPGDIANIRCSAIGATPIS-IRWQPLQGYF----PSH---------VVEYNGELRLGPHK 470 (471)
Q Consensus 415 ~~~~~~~~~~~~g~~~~l~C~~~g~p~~~-v~W~~~g~~l----~~~---------~~~~~~~l~i~~~~ 470 (471)
|...+....+.+|+.+.|.|.+.|.|.|. ++|+|||..+ ... .....++|.|.+++
T Consensus 191 i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 260 (290)
T 2o26_X 191 VSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSAR 260 (290)
T ss_dssp EECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCC
T ss_pred cccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCC
Confidence 88888788999999999999999999996 9999999883 321 11245689998875
No 81
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.95 E-value=2e-27 Score=232.97 Aligned_cols=258 Identities=14% Similarity=0.223 Sum_probs=161.2
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCC-CC-CeEEEEeCCCCCCCCC-----------cccCcEEEEcCCCCCCCeEEEE
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SND-PS-ATIKWSKDNQEQLPPN-----------MIAGETLIINGITKADEGVYIC 157 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~-p~-~~v~W~~~~~~~~~~~-----------~~~~~~L~i~~v~~~D~G~Y~C 157 (471)
|.+...+....+.+|+.++|.|. .+. |. +.|.|+++ +..+... ......|.|.+++.+| |.|+|
T Consensus 133 P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C 210 (457)
T 1hzh_H 133 PSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG-ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 210 (457)
T ss_dssp CEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTT-TBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEE
T ss_pred CeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeC-CEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEE
Confidence 33433333445679999999999 554 64 79999998 4333210 0012379999999999 99999
Q ss_pred EEEecCCceeeeeEEEEEee---------------ccCCeeeecCCCcee-EEcCCeEEEEEEccCCCCC----CeEEEE
Q psy17058 158 SIQNAQGNVFQDYASIQVDK---------------REMPRIRIHPNASQT-FIVGDRADIQCVLEAGEPS----PTQTWI 217 (471)
Q Consensus 158 ~~~~~~~~~~~~~~~l~v~~---------------~~~p~~~~~~~~~~~-v~~g~~~~L~C~~~~~~p~----~~v~W~ 217 (471)
.|.|..+. ......+.+.. ..+|.+.+.++.... +.+|+.++|.|.+ .+.|+ ..++|+
T Consensus 211 ~a~n~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~-~g~~p~p~~~~i~W~ 288 (457)
T 1hzh_H 211 NVNHKPSN-TKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVV-VDVSHEDPEVKFNWY 288 (457)
T ss_dssp EEEEGGGT-EEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEE-ECCCTTCCCCEEEEE
T ss_pred EEEeCCCC-cceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEE-EcccCCCCceEEEEE
Confidence 99997665 33333333221 113454333333222 5679999999999 45543 399999
Q ss_pred eCCCCCCcCCC-ceEEeeeceEEEec---cCCCC---CeEEEEEEEcCCCceEEEEEEE----EEeCCceeeCCCccEEe
Q psy17058 218 RPDNDGKFGPD-VEVYQELGVLRFNN---IATGD---EGKYTCIAENSAGKEVMNAYIH----VLTLPAVTITPSEYVSV 286 (471)
Q Consensus 218 ~~~~~~~~~~~-~~~~~~~~~l~i~~---~~~~d---~G~Y~C~~~~~~~~~~~~~~l~----V~~~p~~~~~~~~~~~~ 286 (471)
|++..+..... ......++.+.+.. +...| +|.|+|.|.|..+.......+. +..+|.+.+.+.....+
T Consensus 289 k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~ 368 (457)
T 1hzh_H 289 VDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDEL 368 (457)
T ss_dssp ETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGG
T ss_pred eCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCcccc
Confidence 99876432211 11111133344332 23444 9999999998755543333332 35677776665433334
Q ss_pred cCCCcEEEEEEEeecCCC--eEEEEeCCccCCCccccc-------ccCceeEEEEeecCCCCCeEEEEEEEcCCCce
Q psy17058 287 RPGEPLTLECEATGRPMP--TVSWVKYIAPFDRNLERD-------ELTSRAVYTIASVRESDAGQYKCIGKNSAGTE 354 (471)
Q Consensus 287 ~~g~~v~l~C~~~g~p~~--~i~W~~~~~~~~~~~~~~-------~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 354 (471)
..|+ +.|.|.+.|.+++ .+.|+++|..+....... .....+.|.|.....+|.|.|+|.|.|.....
T Consensus 369 ~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~ 444 (457)
T 1hzh_H 369 TKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHN 444 (457)
T ss_dssp GSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred CCCc-EEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCCC
Confidence 5566 9999999996443 899999998875321100 01122456666666688999999999986544
No 82
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.95 E-value=2.1e-28 Score=238.38 Aligned_cols=307 Identities=12% Similarity=0.168 Sum_probs=199.7
Q ss_pred eccceEEEEecCcEEEEEEeeeC---CccEEEeccc--hh-----------------------h-----------h----
Q psy17058 42 AENHEVTVYEGGDAELKCNTYYA---PGRWMWLNFY--SF-----------------------L-----------S---- 78 (471)
Q Consensus 42 ~~~~~~~v~~g~~~~l~C~~~~~---~~~~~w~~~~--~~-----------------------~-----------~---- 78 (471)
..+..+.+.+|+.++|.|.+... ...+.|++.. .. + .
T Consensus 4 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (434)
T 1igy_B 4 QESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLS 83 (434)
T ss_dssp ECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEEC
T ss_pred ECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEEC
Confidence 34567899999999999999853 4568887531 00 0 0
Q ss_pred -------heeeeeeeec----------------CCCCcEEEcCCceeecCCCcEEEEee-CCC-CCC-eEEEEeCCCCCC
Q psy17058 79 -------LIIICLAYLS----------------PQANEVQVTPRQQSAPEGSQVTIECK-SND-PSA-TIKWSKDNQEQL 132 (471)
Q Consensus 79 -------~~~~c~~~~~----------------~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~-p~~-~v~W~~~~~~~~ 132 (471)
..|.|.+... ..+|.+...+....+.+|+.++|.|. .+. |.+ .+.|+++ +..+
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~-~~~~ 162 (434)
T 1igy_B 84 SLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG-SLSS 162 (434)
T ss_dssp SBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTT-TBCS
T ss_pred CCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeC-CcCC
Confidence 1256776421 12344544443445689999999999 554 665 9999999 4332
Q ss_pred C----------CCcccCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEe----------eccCCeeeecCCCcee
Q psy17058 133 P----------PNMIAGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVD----------KREMPRIRIHPNASQT 192 (471)
Q Consensus 133 ~----------~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~----------~~~~p~~~~~~~~~~~ 192 (471)
. ......+.|.|.+++.+| |.|+|.|.|..+. ......+.+. ....|.+.+.++....
T Consensus 163 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~-~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~ 240 (434)
T 1igy_B 163 GVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASS-TKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKD 240 (434)
T ss_dssp SEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTT-CCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHH
T ss_pred CeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCC-ccceeeccCCCCCCccccCCCCcCcEEEEeCCChHH
Confidence 1 001123579999999999 9999999998876 3333333221 0111444444433222
Q ss_pred -EEcCCeEEEEEEccCCCC----CCeEEEEeCCCCCCcCCCce-------EEeeeceEEEeccCCCCCeEEEEEEEcCCC
Q psy17058 193 -FIVGDRADIQCVLEAGEP----SPTQTWIRPDNDGKFGPDVE-------VYQELGVLRFNNIATGDEGKYTCIAENSAG 260 (471)
Q Consensus 193 -v~~g~~~~L~C~~~~~~p----~~~v~W~~~~~~~~~~~~~~-------~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 260 (471)
+.+|+.++|.|.+. +.+ .+.++|+|++..+....... .....+.|.|.++..+|+|.|+|.|.|..+
T Consensus 241 ~v~~G~~~~L~C~~~-g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 319 (434)
T 1igy_B 241 TLLITVTPKVTCVVV-DISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAF 319 (434)
T ss_dssp HHSTTSCCEEEEEEC-CCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSC
T ss_pred hcccCCCcEEEEEEe-ccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCC
Confidence 67899999999994 552 45899999987653221110 011134699999999999999999999877
Q ss_pred ceE--EEEEE--EEEeCCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeCCccCCCccccc-------ccCce
Q psy17058 261 KEV--MNAYI--HVLTLPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKYIAPFDRNLERD-------ELTSR 327 (471)
Q Consensus 261 ~~~--~~~~l--~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~~~~~~~~~~~~-------~~~~~ 327 (471)
... ..+.+ .+..+|.+.+.+.... ...|+.+.|.|.+.|. |++ .+.|+++|..+....... .....
T Consensus 320 ~~~~~~~v~~~~~~~~~P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~ 398 (434)
T 1igy_B 320 PAPIEKTISKTKGKPRAPQVYTIPPPKE-QMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVY 398 (434)
T ss_dssp SSCCCCCCCCCCSCCBCCCCEEECCCSS-SSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEE
T ss_pred CCceeEEEeccCCCCcCCEEEEECCCHH-HhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEE
Confidence 542 22222 3445677665543322 3457789999999985 433 899999999875321110 11123
Q ss_pred eEEEEeecCCCCCeEEEEEEEcCCCc
Q psy17058 328 AVYTIASVRESDAGQYKCIGKNSAGT 353 (471)
Q Consensus 328 ~~l~i~~~~~~d~G~Y~C~a~n~~g~ 353 (471)
+.|.|.....+|+|.|+|.|.|....
T Consensus 399 s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 399 SKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp EEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred EEEEECchhccCCCEEEEEEEcCCCC
Confidence 46777777788999999999998654
No 83
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.95 E-value=5.9e-28 Score=225.60 Aligned_cols=260 Identities=13% Similarity=0.195 Sum_probs=171.5
Q ss_pred CCCCcEEEcCCceeecCC--CcEEEEee-CC-CC-CCeEEEEeCCCCCCCCCcc------------cCcEEEEcCCCCCC
Q psy17058 89 PQANEVQVTPRQQSAPEG--SQVTIECK-SN-DP-SATIKWSKDNQEQLPPNMI------------AGETLIINGITKAD 151 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G--~~v~l~C~-~~-~p-~~~v~W~~~~~~~~~~~~~------------~~~~L~i~~v~~~D 151 (471)
..+|.+.+.+.......| +++.|.|. .+ .| .+.|.|+|+ +..+..... ..+.|.|.++..+|
T Consensus 5 ~~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~-g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d 83 (323)
T 2wqr_A 5 FTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLED-GQVMDVDLSTASTTQEGELASTQSELTLSQKHWLS 83 (323)
T ss_dssp CCCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEET-TEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHT
T ss_pred CCCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEEC-CEEcccceecCCcCccCCcEEEEEEEEEcHHHcCC
Confidence 356777776554444455 69999999 44 34 479999999 655543211 12357788888889
Q ss_pred CeEEEEEEEecCCceeeeeEEEEE---eeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC---eEEEEeCCCCCCc
Q psy17058 152 EGVYICSIQNAQGNVFQDYASIQV---DKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP---TQTWIRPDNDGKF 225 (471)
Q Consensus 152 ~G~Y~C~~~~~~~~~~~~~~~l~v---~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~---~v~W~~~~~~~~~ 225 (471)
+|.|+|.|.|..+. .. ..+.+ .....|.+.+.++....+.+|+.++|.|.+....|.+ .++|+++++....
T Consensus 84 ~g~Y~C~a~n~~~~-~~--~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~ 160 (323)
T 2wqr_A 84 DRTYTCQVTYQGHT-FE--DSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVN 160 (323)
T ss_dssp TCCEEEEEEETTEE-EE--EEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCC
T ss_pred CCcEEEEEEeCCCC-cc--eeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccc
Confidence 99999999997654 22 22221 1122355555555444577899999999984445555 9999997643221
Q ss_pred C-CCce------EEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEE----EEeCCceeeCCCccEEecCCCcEEE
Q psy17058 226 G-PDVE------VYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIH----VLTLPAVTITPSEYVSVRPGEPLTL 294 (471)
Q Consensus 226 ~-~~~~------~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~----V~~~p~~~~~~~~~~~~~~g~~v~l 294 (471)
. .... .....+.|.|.+++.+|+|.|+|.+.|..........+. +..+|.+.+.+... ....|+.+.|
T Consensus 161 ~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~-~~~~g~~~~l 239 (323)
T 2wqr_A 161 HSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPE-WPGSRDKRTL 239 (323)
T ss_dssp CCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCC-CTTCTTEEEE
T ss_pred cccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCCh-HHhcCCcEEE
Confidence 1 1110 011245799999999999999999999764433333332 22456655543221 1234999999
Q ss_pred EEEEee-cCCC-eEEEEeCCccCCCcccc---------cccCceeEEEEeecCCCCCeEEEEEEEcCCCc
Q psy17058 295 ECEATG-RPMP-TVSWVKYIAPFDRNLER---------DELTSRAVYTIASVRESDAGQYKCIGKNSAGT 353 (471)
Q Consensus 295 ~C~~~g-~p~~-~i~W~~~~~~~~~~~~~---------~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 353 (471)
.|.+.| .|.+ .+.|+++|..+...... ......+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 240 ~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 240 ACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred EEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 999998 4544 89999999887543110 01123467999999999999999999999877
No 84
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.95 E-value=1.1e-27 Score=222.89 Aligned_cols=224 Identities=17% Similarity=0.216 Sum_probs=168.8
Q ss_pred CceeEEcCCeEEEEEEccCCCC-CCeEEEEeCCCCCCc--CCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP-SPTQTWIRPDNDGKF--GPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMN 265 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 265 (471)
....+.+|+.++|.|.+ .+.| .+.++|+|++..+.. .....+...++.|.|.+++.+|+|.|+|.+.|..+.....
T Consensus 13 ~~~~v~~G~~v~L~C~~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (315)
T 1itb_B 13 IILVSSANEIDVRPCPL-NPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 91 (315)
T ss_dssp CCCEEETTSCCCCBCCC-CSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEE
T ss_pred eEEEEcCCCcEEEEeec-cCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEE
Confidence 34578899999999999 5555 789999999875432 2222333335689999999999999999999988877766
Q ss_pred EEEEEEe-CCceeeCCC--ccEEecCCCcEEEEEEE------eecCCCeEEEEeCCccCCCcccccccCceeEEEEeecC
Q psy17058 266 AYIHVLT-LPAVTITPS--EYVSVRPGEPLTLECEA------TGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVR 336 (471)
Q Consensus 266 ~~l~V~~-~p~~~~~~~--~~~~~~~g~~v~l~C~~------~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 336 (471)
+.+.+.. +|.+...+. ....+..|+++.|.|.+ .|+|.+.+.|++++..+..... ........|.|.+++
T Consensus 92 ~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~-~~~~~~~~L~i~~v~ 170 (315)
T 1itb_B 92 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI-HFSGVKDRLIVMNVA 170 (315)
T ss_dssp CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSS-SEEEETTEEEESSCC
T ss_pred EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccc-eEeecCceEEEEece
Confidence 6666553 343322221 12467899999999998 7899999999999988754322 123345689999999
Q ss_pred CCCCeEEEEEEE-cCCCce---EEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecC
Q psy17058 337 ESDAGQYKCIGK-NSAGTE---EKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEP 412 (471)
Q Consensus 337 ~~d~G~Y~C~a~-n~~g~~---~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~ 412 (471)
.+|+|.|+|.|. |..|.. ...+.+.+..... ..+
T Consensus 171 ~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~------------------------------------------~~~ 208 (315)
T 1itb_B 171 EKHRGNYTCHASYTYLGKQYPITRVIEFITLEENK------------------------------------------PTR 208 (315)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCC------------------------------------------CCC
T ss_pred ehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCC------------------------------------------CCC
Confidence 999999999999 788876 4445554443210 125
Q ss_pred CeeEEcCCe-eeeeCCCeEEEEEEecccCCceEEEecCCCCCCCc
Q psy17058 413 PRITLRPVR-QTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSH 456 (471)
Q Consensus 413 p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~ 456 (471)
|.|...+.. ..+.+|+.+.|.|.+.|.|.|.+.|+|||.+|..+
T Consensus 209 P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~ 253 (315)
T 1itb_B 209 PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDED 253 (315)
T ss_dssp CEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTT
T ss_pred CEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcc
Confidence 778766654 57899999999999999999999999999998764
No 85
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.95 E-value=8.8e-26 Score=204.12 Aligned_cols=223 Identities=16% Similarity=0.234 Sum_probs=173.0
Q ss_pred CeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCC
Q psy17058 181 PRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSA 259 (471)
Q Consensus 181 p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 259 (471)
|.+.+.+. ...+.+|+.++|.|.+ .+.|.+ .+.|++++..+... ...|.|.+++.+|+|.|+|.+.|..
T Consensus 2 P~i~~~p~-~~~v~~G~~v~l~C~~-~~~~~~~~~~W~~~g~~~~~~--------~~~l~i~~~~~~d~G~Y~C~~~~~~ 71 (262)
T 3rjd_A 2 AVITLQPP-WVSVFQEETVTLHCEV-LHLPGSSSTQWFLNGTATQTS--------TPSYRITSASVNDSGEYRCQRGLSG 71 (262)
T ss_dssp CEEEESSC-CSEEETTCCEEEEEEC-SSCCCTTCEEEEETTEECSCC--------SSEEEESSCCGGGCEEEEEEESSSC
T ss_pred CeEecCCC-cEEeeCCCeEEEEEEC-CCCCCCceEEEEECCEEeecc--------CCeEEEecCCcccCeEEEEEEecCC
Confidence 45555554 3578899999999999 666766 99999988764322 5679999999999999999998765
Q ss_pred CceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEE-eecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCC
Q psy17058 260 GKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEA-TGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRES 338 (471)
Q Consensus 260 ~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 338 (471)
+. ..+.|.|..++... .+. ...+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. ......|.|.+++.+
T Consensus 72 ~s--~~~~l~v~~~~~~~-~~~-~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~------~~~~~~l~i~~~~~~ 141 (262)
T 3rjd_A 72 RS--DPIQLEIHRGWLLL-QVS-SRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF------FHWNSNLTILKTNIS 141 (262)
T ss_dssp CC--CCEEEEEECSSEEE-EES-CSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEE------EEECCCEEESSCCGG
T ss_pred cc--ccEEEEEeccceEe-cCC-CeEEecCCeEEEEEEccCCCCCceEEEEECCccccc------cCCCCeEEEEECChh
Confidence 44 35667777665433 322 3467899999999999 6678889999999877632 223567999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEc
Q psy17058 339 DAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLR 418 (471)
Q Consensus 339 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~ 418 (471)
|+|.|+|.|.|..+..+..+.|.|...+ .+|.+...
T Consensus 142 d~G~Y~C~~~n~~~~~~~~~~l~V~~~~--------------------------------------------~~p~~~~~ 177 (262)
T 3rjd_A 142 HNGTYHCSGMGKHRYTSAGISVTVKELF--------------------------------------------PAPVLNAS 177 (262)
T ss_dssp GCEEEEEEEESSSEEEEECEEEEEECSS--------------------------------------------CCCEEEES
T ss_pred hCEEEEEEEeCCCCccccceEEEeccCC--------------------------------------------CCCeEeec
Confidence 9999999999999888888899998752 24677766
Q ss_pred CCeeeeeCCCeEEEEEEecccCC-c----eEEEecCCCCCCCceEEecCeEEECCCC
Q psy17058 419 PVRQTVKPGDIANIRCSAIGATP-I----SIRWQPLQGYFPSHVVEYNGELRLGPHK 470 (471)
Q Consensus 419 ~~~~~~~~g~~~~l~C~~~g~p~-~----~v~W~~~g~~l~~~~~~~~~~l~i~~~~ 470 (471)
+ ...+.+|+.+.|.|.+.+.|. + .+.|++||..+... ...++|.|.+++
T Consensus 178 ~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~--~~~~~L~i~~v~ 231 (262)
T 3rjd_A 178 V-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR--NTSSEYQILTAR 231 (262)
T ss_dssp S-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE--ESCCEEEESSCC
T ss_pred C-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc--CCCceEEEEEec
Confidence 5 667889999999999999986 4 37899999987633 245678887764
No 86
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=216.09 Aligned_cols=222 Identities=17% Similarity=0.290 Sum_probs=158.5
Q ss_pred cCCCceeEEcCCeEEEEEEccCCC-CCCeEEEEeCCCCCCc---------CCCceEE-------eeeceEEEeccCCCCC
Q psy17058 186 HPNASQTFIVGDRADIQCVLEAGE-PSPTQTWIRPDNDGKF---------GPDVEVY-------QELGVLRFNNIATGDE 248 (471)
Q Consensus 186 ~~~~~~~v~~g~~~~L~C~~~~~~-p~~~v~W~~~~~~~~~---------~~~~~~~-------~~~~~l~i~~~~~~d~ 248 (471)
.++....+.+|+.++|.|.+ .+. |.+.+.|+|++..... ..++... .....|.|.+++.+|+
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~-~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~ 86 (327)
T 2wng_A 8 QPDKSVSVAAGESAILHCTV-TSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADA 86 (327)
T ss_dssp CCCSEEEEETTSCEEECCEE-SCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGC
T ss_pred cCCCceEEecCCcEEEEEEc-cCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccC
Confidence 34456678999999999999 554 8889999998865221 0122221 2245799999999999
Q ss_pred eEEEEEEEcCCCce-----EEEEEEEEEeCCcee-eCCCccEEecCCCcEEEEEEEeecCCC--eEEEEeCCccCCCccc
Q psy17058 249 GKYTCIAENSAGKE-----VMNAYIHVLTLPAVT-ITPSEYVSVRPGEPLTLECEATGRPMP--TVSWVKYIAPFDRNLE 320 (471)
Q Consensus 249 G~Y~C~~~~~~~~~-----~~~~~l~V~~~p~~~-~~~~~~~~~~~g~~v~l~C~~~g~p~~--~i~W~~~~~~~~~~~~ 320 (471)
|.|+|.+.|..+.. ...+.|.|..+|... +... ...+.+|+.+.|.|.+.|.|++ .+.|++++..+.....
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~ 165 (327)
T 2wng_A 87 GTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGP-AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQT 165 (327)
T ss_dssp EEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEE
T ss_pred eEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeecc-ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccccc
Confidence 99999999976541 134678887665432 2221 3467899999999999998766 8999999988764321
Q ss_pred c-------cccCceeEEEEeecCCCCCeEEEEEEEcCCCce---EEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCC
Q psy17058 321 R-------DELTSRAVYTIASVRESDAGQYKCIGKNSAGTE---EKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPE 390 (471)
Q Consensus 321 ~-------~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~---~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~ 390 (471)
. ......+.|.|.....+|.|.|+|.|.|..+.. ..+..+.+...
T Consensus 166 ~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~------------------------- 220 (327)
T 2wng_A 166 NVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIR------------------------- 220 (327)
T ss_dssp EEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBC-------------------------
T ss_pred ccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccC-------------------------
Confidence 0 112234567888777778899999999998763 33444432221
Q ss_pred CCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCC-c-eEEEecCCCCCCCc
Q psy17058 391 PEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATP-I-SIRWQPLQGYFPSH 456 (471)
Q Consensus 391 ~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~-~-~v~W~~~g~~l~~~ 456 (471)
.+|.+...+.. +.+|+.+.|.|.+.|.|+ + .|+|+|||++|..+
T Consensus 221 --------------------~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 266 (327)
T 2wng_A 221 --------------------VPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTE 266 (327)
T ss_dssp --------------------BCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEE
T ss_pred --------------------CCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCc
Confidence 35787766544 789999999999999644 4 89999999988653
No 87
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.94 E-value=2.2e-26 Score=216.91 Aligned_cols=255 Identities=17% Similarity=0.261 Sum_probs=166.7
Q ss_pred cCCceeecCCCcEEEEee-CCC--CCCeEEEEeCC-CCCC-------------------CCCcc-------cCcEEEEcC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SND--PSATIKWSKDN-QEQL-------------------PPNMI-------AGETLIING 146 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~--p~~~v~W~~~~-~~~~-------------------~~~~~-------~~~~L~i~~ 146 (471)
.|..+.+.+|++++|.|. .+. +.+.+.|+|++ +..+ ..+.. ...+|+|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSS 85 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECC
Confidence 355778999999999999 544 46789999973 2111 11111 124899999
Q ss_pred CCCCCCeEEEEEEEecCCceeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCC
Q psy17058 147 ITKADEGVYICSIQNAQGNVFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDG 223 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~ 223 (471)
++.+|+|.|+|.+.+..+. ......|.|.. ..+|.+...++. ..+.+|+.++|.|.+....|. +.++|++++..+
T Consensus 86 v~~~D~G~Y~C~~~n~~~~-~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~ 163 (344)
T 1za6_B 86 LRSEDTAVYFCTRSLNMAY-WGQGTLVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTS 163 (344)
T ss_dssp CCGGGCEEEEEEETTTTCE-ECCCEEEEECSSCCBCCEEEEECCS-CTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCT
T ss_pred CCcccCEEEEEEEecCcce-ecCcEEEEEecCCCCCCeEEEcccc-ccccCCCcEEEEEEEeeEECCCeEEEEecCCccC
Confidence 9999999999999885433 33445666652 234555544332 235689999999999444465 799999998753
Q ss_pred CcCCCc------eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEE------------------------EEeC
Q psy17058 224 KFGPDV------EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIH------------------------VLTL 273 (471)
Q Consensus 224 ~~~~~~------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~------------------------V~~~ 273 (471)
...... ......+.|.|..+..+| |.|+|.+.|..+.......+. +..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (344)
T 1za6_B 164 GVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPRE 242 (344)
T ss_dssp TEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBC
T ss_pred ceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcC
Confidence 211000 011123478999988878 999999999877543332221 1235
Q ss_pred CceeeCCCccEEecCCCcEEEEEEEeec-C-CCeEEEEeCCccCCCcccc----c---ccCceeEEEEeecCCCCCeEEE
Q psy17058 274 PAVTITPSEYVSVRPGEPLTLECEATGR-P-MPTVSWVKYIAPFDRNLER----D---ELTSRAVYTIASVRESDAGQYK 344 (471)
Q Consensus 274 p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p-~~~i~W~~~~~~~~~~~~~----~---~~~~~~~l~i~~~~~~d~G~Y~ 344 (471)
|.+.+.+.... ...|..+.|.|.+.|. | .+.+.|+++|..+...... . .....+.|.|.....+|+|.|+
T Consensus 243 P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~Yt 321 (344)
T 1za6_B 243 PQVYTLPPSRD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFS 321 (344)
T ss_dssp CEEEEECCCGG-GGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEE
T ss_pred CEEEEeCCChH-hccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEE
Confidence 55554433222 2346679999999995 4 3589999999887632110 0 1112345667666677899999
Q ss_pred EEEEcCCCceE
Q psy17058 345 CIGKNSAGTEE 355 (471)
Q Consensus 345 C~a~n~~g~~~ 355 (471)
|.|.|......
T Consensus 322 C~a~~~~l~~~ 332 (344)
T 1za6_B 322 CSVMHEALHNH 332 (344)
T ss_dssp EEEECTTSTTS
T ss_pred EEEEcCCCCCC
Confidence 99999876543
No 88
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.94 E-value=3.5e-25 Score=212.33 Aligned_cols=264 Identities=14% Similarity=0.253 Sum_probs=188.6
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCC-CCCCCC-------Ccc-----cCcEEEEcCCCCCCCeEEE
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDN-QEQLPP-------NMI-----AGETLIINGITKADEGVYI 156 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~-~~~~~~-------~~~-----~~~~L~i~~v~~~D~G~Y~ 156 (471)
+|.|.. +.+..+.+|+++.|.|. .+.|.+.+.|+++. +..+.. +.. ..+.|.|.+++.+|+|.|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 356665 56778899999999999 88999999999982 222221 111 3468999999999999999
Q ss_pred EEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC--CceEEee
Q psy17058 157 CSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP--DVEVYQE 234 (471)
Q Consensus 157 C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~ 234 (471)
|.|.|..|. ....+.|.|. .+|.+... .....+.+|+.+.|.|.+ .+.|.+.+.|++++..+.... ++.+...
T Consensus 80 C~a~n~~g~-~~~~~~l~V~--~~P~~~~~-~~~~~~~~g~~~~l~C~~-~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~ 154 (389)
T 2jll_A 80 CEAASRIGG-HQKSMYLDIE--YAPKFISN-QTIYYSWEGNPINISCDV-KSNPPASIHWRRDKLVLPAKNTTNLKTYST 154 (389)
T ss_dssp EEEECSSCE-EEEEEEEEEE--EEEEECCS-CCEEEECTTCCEEEEECE-EEESCCEEEEEETTEESSCTTCTTEEEEEC
T ss_pred EEEEeCCCC-cceEEEEEEE--eCCEEecC-cceEEeccCCEEEEEEEE-EecCCCeEEEEECCccCCcccCceEEEecc
Confidence 999998887 5555555554 55655433 333456799999999999 788899999999988765543 3333332
Q ss_pred --eceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEee----cCCC--eE
Q psy17058 235 --LGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATG----RPMP--TV 306 (471)
Q Consensus 235 --~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g----~p~~--~i 306 (471)
...|.|.++...|.|.|+|.|.|..|.....+.|.+...|...... ......+..+.|.|.... .|.. .+
T Consensus 155 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~--~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v 232 (389)
T 2jll_A 155 GRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGV--KIIELSQTTAKVSFNKPDSHGGVPIHHYQV 232 (389)
T ss_dssp SSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEE--EEEEECSSCEEEEEECCSCCTTSCEEEEEE
T ss_pred CCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcce--EEeeccCCEEEEEEeCCCCCCCcceEEEEE
Confidence 3469999999999999999999999988877878776555322111 112334678999997422 2322 47
Q ss_pred EEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 307 SWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 307 ~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
.|.+++....... ........+.|.++...+.+.|+|.|.|..|....+..+.+..
T Consensus 233 ~~~~~~~~~~~~~--~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t 288 (389)
T 2jll_A 233 DVKEVASEIWKIV--RSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQT 288 (389)
T ss_dssp EEEETTCSCCEEE--ECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEEC
T ss_pred EEEECCCcccEEe--eccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEe
Confidence 7888765432211 1223457899999999999999999999999765444444443
No 89
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.94 E-value=6.7e-26 Score=210.19 Aligned_cols=234 Identities=19% Similarity=0.352 Sum_probs=169.4
Q ss_pred ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc-----------------CCCceEE---eeeceEEEeccCCCCCe
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF-----------------GPDVEVY---QELGVLRFNNIATGDEG 249 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~-----------------~~~~~~~---~~~~~l~i~~~~~~d~G 249 (471)
..++.+|++++|.|.+..+.+.+.++|+|++..... ..+..+. ....+|.|.+++.+|+|
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 87 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSG 87 (308)
T ss_dssp SCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCE
T ss_pred EeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCE
Confidence 456889999999999854555568999997654211 0111111 12357999999999999
Q ss_pred EEEEEEEcC-CCceEEEEEEEEEeCCceeeC-CCccEEecCCCcEEEEEEE-eecCCCeEEEEeCCccCCCcccc---cc
Q psy17058 250 KYTCIAENS-AGKEVMNAYIHVLTLPAVTIT-PSEYVSVRPGEPLTLECEA-TGRPMPTVSWVKYIAPFDRNLER---DE 323 (471)
Q Consensus 250 ~Y~C~~~~~-~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~~g~~v~l~C~~-~g~p~~~i~W~~~~~~~~~~~~~---~~ 323 (471)
.|+|.+.|. .+..+..+.+.+...|.+... .........|+.+.|.|.+ .|.|.+.+.|++++..+...... ..
T Consensus 88 ~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~ 167 (308)
T 4fom_A 88 KYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNET 167 (308)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSC
T ss_pred EEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeec
Confidence 999999886 445667777888777665432 2233455678899999985 57999999999999887643221 12
Q ss_pred cCceeEEEEeecCCCCCeEEEEEEEcCCCceEE--EEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcC
Q psy17058 324 LTSRAVYTIASVRESDAGQYKCIGKNSAGTEEK--VITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVG 401 (471)
Q Consensus 324 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 401 (471)
....+.|.|..+..+|+|.|+|.|.|..|.... ++.|.|..
T Consensus 168 ~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~------------------------------------- 210 (308)
T 4fom_A 168 ATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQY------------------------------------- 210 (308)
T ss_dssp EEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCE-------------------------------------
T ss_pred ccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEec-------------------------------------
Confidence 223457999999999999999999999876644 44555544
Q ss_pred CcceEEeeecCCeeEEcCCe-eeeeCCCeEEEEEEecccCCc-eEEEecCCCCCCCceEEecCeE-EECCCC
Q psy17058 402 SNASISCSVEPPRITLRPVR-QTVKPGDIANIRCSAIGATPI-SIRWQPLQGYFPSHVVEYNGEL-RLGPHK 470 (471)
Q Consensus 402 ~~~~y~c~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~l-~i~~~~ 470 (471)
+|.+...+.. ..+..|+.+.|.|.+.|.|+| .++|+|||..+.......++++ .|.+++
T Consensus 211 ----------~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~ 272 (308)
T 4fom_A 211 ----------APEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLT 272 (308)
T ss_dssp ----------EEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCC
T ss_pred ----------CCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCC
Confidence 4566544443 567788999999999999998 7999999999987766655554 455554
No 90
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.94 E-value=1.8e-25 Score=208.05 Aligned_cols=243 Identities=17% Similarity=0.239 Sum_probs=170.8
Q ss_pred EEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEE
Q psy17058 173 IQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYT 252 (471)
Q Consensus 173 l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 252 (471)
++.....+|.+...+. ..+.+|+.++|.|.+ .+. .+.+.|+|++..+... .........|.|.+++.+|+|.|+
T Consensus 17 ~~~~~~~~P~i~~~p~--~~v~~G~~v~L~C~~-~~~-~~~~~W~k~g~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~ 90 (316)
T 3vh8_G 17 SHMGGQDKPFLSAWPS--AVVPRGGHVTLRCHY-RHR-FNNFMLYKEDRIHIPI--FHGRIFQESFNMSPVTTAHAGNYT 90 (316)
T ss_dssp -------CCEEEEESC--SEEETTSCEEEEEEB-TTB-CCSEEEEESSCSSSCH--HHHCCBSSCEEECSCCGGGCEEEE
T ss_pred cccCCCCCCEeeccCC--CccCCCCCEEEEEEc-cCC-CceEEEEeCCCcccee--ecCCcceEEEEECCCCcccCeEEE
Confidence 3444456677777765 368899999999999 444 6789999998874321 111223678999999999999999
Q ss_pred EEEEcCC-----CceEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc---c
Q psy17058 253 CIAENSA-----GKEVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE---R 321 (471)
Q Consensus 253 C~~~~~~-----~~~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~---~ 321 (471)
|.+.+.. +..+..+.|.|.. +|.+...+. ..+.+|++++|.|.+. .+.+.+.|++++..+..... .
T Consensus 91 C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~--~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~ 167 (316)
T 3vh8_G 91 CRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPG--PLVKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQI 167 (316)
T ss_dssp EEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESC--SEEETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEE
T ss_pred EEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCC--CccCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeee
Confidence 9998632 2234556777764 344544443 2478999999999995 56679999999987743211 1
Q ss_pred cccCceeEEEEeecCCCCCeEEEEEEEcCCCce-----EEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCce
Q psy17058 322 DELTSRAVYTIASVRESDAGQYKCIGKNSAGTE-----EKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEY 396 (471)
Q Consensus 322 ~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 396 (471)
........|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|...+
T Consensus 168 ~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~------------------------------ 217 (316)
T 3vh8_G 168 HDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPY------------------------------ 217 (316)
T ss_dssp ETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSS------------------------------
T ss_pred cCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCC------------------------------
Confidence 122356789999999999999999999998742 455677776542
Q ss_pred EEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCceEE-------ecCeEEECCC
Q psy17058 397 VYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHVVE-------YNGELRLGPH 469 (471)
Q Consensus 397 ~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~~~-------~~~~l~i~~~ 469 (471)
.+|.+...+. ..+.+|+.+.|.|.+. .|.+.+.|+|+|..+...... ..++|.|.++
T Consensus 218 --------------~~p~i~~~~~-~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v 281 (316)
T 3vh8_G 218 --------------EKPSLSAQPG-PKVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPA 281 (316)
T ss_dssp --------------CCCEEEEESC-SCCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC--
T ss_pred --------------CCCeEEeCCC-CeecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCc
Confidence 2577777664 3678999999999997 577899999999988754321 2267888776
Q ss_pred C
Q psy17058 470 K 470 (471)
Q Consensus 470 ~ 470 (471)
+
T Consensus 282 ~ 282 (316)
T 3vh8_G 282 T 282 (316)
T ss_dssp -
T ss_pred C
Confidence 4
No 91
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.93 E-value=2.2e-25 Score=204.99 Aligned_cols=238 Identities=19% Similarity=0.202 Sum_probs=173.1
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcC
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
.+|.+...+ ....+.+|+.++|.|.+ .+. +.|++++... .........+.|.|.+++.+|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~~-~~~~v~~G~~v~L~C~~-~~~----v~W~~~~~~~---~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 73 (292)
T 4dkd_C 3 SIPVIEPSV-PELVVKPGATVTLRCVG-NGS----VEWDGPPSPH---WTLYSDGSSSILSTNNATFQNTGTYRCTEPGD 73 (292)
T ss_dssp -CCEEESCC-SSCEECTTCCEEEEEEC-SSC----CCBCCCCCSS---CEECCBTTEEEEEESSCCGGGCSCEEECCCC-
T ss_pred CCceecCCC-CeEEEcCCCcEEEEEcC-CCc----eEEccCCCCc---eEEeccCceEEEEEcccccccCEEEEEEEccC
Confidence 345555444 45578899999999998 442 9999765431 11111112458999999999999999999998
Q ss_pred CCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCC--CeEEEEeCC-ccCCCcccccccCceeEEEEeec
Q psy17058 259 AGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPM--PTVSWVKYI-APFDRNLERDELTSRAVYTIASV 335 (471)
Q Consensus 259 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~i~W~~~~-~~~~~~~~~~~~~~~~~l~i~~~ 335 (471)
.+..+..+.|.|..+|...........+.+|+.+.|.|.+.+ |. +.+.|++++ ..+..... ........|.|.++
T Consensus 74 ~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~-~~~~~~~~L~i~~~ 151 (292)
T 4dkd_C 74 PLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTN-YSFSPWHGFTIHRA 151 (292)
T ss_dssp ---CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCC-EECCSSSCCEETTC
T ss_pred CCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCc-ccccCCceEEECCC
Confidence 877788889999887765444444678899999999999997 44 689999984 44433222 22233445999999
Q ss_pred CCCCCeEEEEEEEcCCCceE-EEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCe
Q psy17058 336 RESDAGQYKCIGKNSAGTEE-KVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPR 414 (471)
Q Consensus 336 ~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~ 414 (471)
+.+|+|.|+|.|.|..|... ..+.|.|...+ ..+|.
T Consensus 152 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~-------------------------------------------~~~p~ 188 (292)
T 4dkd_C 152 KFIQSQDYQCSALMGGRKVMSISIRLKVQKVI-------------------------------------------PGPPA 188 (292)
T ss_dssp CGGGCSEEEEEECSTTSCEECCCEEEEEECCC-------------------------------------------CSSCE
T ss_pred CHHHCeEEEEEEEeCCCceeEEEEEEEEeCCC-------------------------------------------CCCCe
Confidence 99999999999999888664 47888887632 12588
Q ss_pred eEEcCCeeeeeCCCeEEEEEEecccCC-ceEEEecCCCCCCCceE--E------ecCeEEECCCC
Q psy17058 415 ITLRPVRQTVKPGDIANIRCSAIGATP-ISIRWQPLQGYFPSHVV--E------YNGELRLGPHK 470 (471)
Q Consensus 415 ~~~~~~~~~~~~g~~~~l~C~~~g~p~-~~v~W~~~g~~l~~~~~--~------~~~~l~i~~~~ 470 (471)
+...+....+.+|+.+.|.|.+.+.|+ +.+.|+++|..+..... . ..++|.|.+++
T Consensus 189 i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 253 (292)
T 4dkd_C 189 LTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVD 253 (292)
T ss_dssp EEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCC
T ss_pred EEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccC
Confidence 888888888889999999999998776 57999999987753322 1 23578888775
No 92
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.93 E-value=4.4e-25 Score=199.99 Aligned_cols=198 Identities=19% Similarity=0.230 Sum_probs=153.1
Q ss_pred eEEcCCeEEEEEEccCCCCCC--eEEEEeCCCCCCcCCCceEEeeeceEEEecc---CCCCCe--EEEEEEEcCCCceEE
Q psy17058 192 TFIVGDRADIQCVLEAGEPSP--TQTWIRPDNDGKFGPDVEVYQELGVLRFNNI---ATGDEG--KYTCIAENSAGKEVM 264 (471)
Q Consensus 192 ~v~~g~~~~L~C~~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~G--~Y~C~~~~~~~~~~~ 264 (471)
.+.+|+.++|.|.+....|.+ .++|++++..+.. .+...+..+.+..+ +..|.| .|+|.+.|..+....
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~ 89 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQET 89 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEE
Confidence 678999999999994437766 9999999876433 23333455666655 777887 499999999888888
Q ss_pred EEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEE
Q psy17058 265 NAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYK 344 (471)
Q Consensus 265 ~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 344 (471)
.+.|.|...|...+.+. ...+.+|+.+.|.|.+. |.+.+.| +|..+.. ......|.|..+..+|+|.|+
T Consensus 90 ~~~l~V~~~p~p~~~~~-~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~------~~~~~~l~i~~~~~~~~g~Y~ 158 (265)
T 2oz4_A 90 LQTVTIYSFPAPNVILT-KPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP------LGPRAQLLLKATPEDNGRSFS 158 (265)
T ss_dssp EEEEEEECCCCCEEEES-CSEEETTCEEEEEEECC--TTSEEEE--SSCSSSC------CSSEECCEEECCGGGTTEEEE
T ss_pred EEEEEEeCCCCceeecC-CceecCCCcEEEEEEcc--CCCEEEE--CCEEccC------CCCcEEEEEccccccCCceEE
Confidence 89999987443333322 34678899999999998 8899999 7776622 234567889999999999999
Q ss_pred EEEEcCC-CceE---EEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEc--
Q psy17058 345 CIGKNSA-GTEE---KVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLR-- 418 (471)
Q Consensus 345 C~a~n~~-g~~~---~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~-- 418 (471)
|.|.|.. |... ..+.|.|..+| .+...
T Consensus 159 C~a~n~~~g~~~~~s~~~~l~V~~~p-----------------------------------------------~~~~~~~ 191 (265)
T 2oz4_A 159 CSATLEVAGQLIHKNQTRELRVLYGP-----------------------------------------------RLDERDC 191 (265)
T ss_dssp EEEEEECSSSEEEEEEEEEEEEEEEE-----------------------------------------------ECCGGGS
T ss_pred EEEEcCCCCCcccccccEEEEEEeCC-----------------------------------------------ccccccC
Confidence 9998644 7665 67888887753 33332
Q ss_pred CCeeeeeCCCeEEEEEEecccCCceEEEecCCC
Q psy17058 419 PVRQTVKPGDIANIRCSAIGATPISIRWQPLQG 451 (471)
Q Consensus 419 ~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~ 451 (471)
+.+..+.+|+.+.|.|.+.|+|.|.++|+|+|.
T Consensus 192 p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~ 224 (265)
T 2oz4_A 192 PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGT 224 (265)
T ss_dssp CSEEEEETTCEECCCCCCEEESCCEEEEEETTT
T ss_pred CCccEEcCCCeEEEEeECccCCCCeEEEEECCc
Confidence 446788999999999999999999999999998
No 93
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.93 E-value=6.9e-23 Score=203.08 Aligned_cols=253 Identities=16% Similarity=0.231 Sum_probs=161.8
Q ss_pred CCCcEEEEee-CCC-CCC-eEEEEeCCCCCC-C--CCc-c------cCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeE
Q psy17058 105 EGSQVTIECK-SND-PSA-TIKWSKDNQEQL-P--PNM-I------AGETLIINGITKADEGVYICSIQNAQGNVFQDYA 171 (471)
Q Consensus 105 ~G~~v~l~C~-~~~-p~~-~v~W~~~~~~~~-~--~~~-~------~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~ 171 (471)
+|+.+.|.|. .+. |.+ .+.|++++.... . ... . ..+.|.|.....+ .|.|+|.+.|..+. .....
T Consensus 149 ~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~-~~~~~ 226 (512)
T 1zvo_C 149 DNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASK-SKKEI 226 (512)
T ss_pred CCCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCC-ceEEE
Confidence 4689999999 444 664 899999733211 0 000 0 2245888888777 99999999998776 22222
Q ss_pred -----------EEEEee--------------------------------------------------ccCCeeeecCCCc
Q psy17058 172 -----------SIQVDK--------------------------------------------------REMPRIRIHPNAS 190 (471)
Q Consensus 172 -----------~l~v~~--------------------------------------------------~~~p~~~~~~~~~ 190 (471)
.+.|.+ ..+|.+.+.++..
T Consensus 227 ~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~ 306 (512)
T 1zvo_C 227 FRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAV 306 (512)
T ss_pred ecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCCh
Confidence 223321 1234444444444
Q ss_pred eeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCcCC--C-ce-----EEeeeceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 191 QTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKFGP--D-VE-----VYQELGVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~~~--~-~~-----~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
..+.+|+.++|.|.+....|. ..++|++++..+.... . .. .+...+.|.|.....+|.|.|+|.|.|..+.
T Consensus 307 ~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~ 386 (512)
T 1zvo_C 307 QDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLP 386 (512)
T ss_pred HHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCC
Confidence 446689999999999544453 5999999987643110 0 00 0111346899999999999999999998765
Q ss_pred eEEEEEEEE------EeCCceeeCCCccEEecCCCcEE-EEEEEeecCCC--eEEEEeCCccCCCccccc-----ccC--
Q psy17058 262 EVMNAYIHV------LTLPAVTITPSEYVSVRPGEPLT-LECEATGRPMP--TVSWVKYIAPFDRNLERD-----ELT-- 325 (471)
Q Consensus 262 ~~~~~~l~V------~~~p~~~~~~~~~~~~~~g~~v~-l~C~~~g~p~~--~i~W~~~~~~~~~~~~~~-----~~~-- 325 (471)
.. ...+.. ..+|.+.+.+... .|+.+. |.|.+.|++++ .+.|+|+|..+....... ...
T Consensus 387 ~~-~~~~~~~~~~~~~~~p~v~~~~~~~----~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~ 461 (512)
T 1zvo_C 387 PQ-RLMALREPAAQAPVKLSLNLLASSD----PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGST 461 (512)
T ss_pred CC-ceeEEeecCCCCCCCCEEEEEccCc----CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCC
Confidence 43 222221 2356665554322 799999 99999985443 689999998876432110 111
Q ss_pred ---ceeEEEEeecCCCCCeEEEEEEEcCCCce--EEEEEEEEec
Q psy17058 326 ---SRAVYTIASVRESDAGQYKCIGKNSAGTE--EKVITVAVEH 364 (471)
Q Consensus 326 ---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~ 364 (471)
..+.|.|.....+|.|.|+|.|.|..... .....|.|..
T Consensus 462 ~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~~~~~~v~~ 505 (512)
T 1zvo_C 462 TFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRSLEVSY 505 (512)
T ss_pred EEEEEEEEEECchhcCCCCeEEEEEEecCCCCceEEEEEEEecc
Confidence 12456777777778999999999987654 4445555544
No 94
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.92 E-value=1.2e-23 Score=194.60 Aligned_cols=186 Identities=20% Similarity=0.289 Sum_probs=148.2
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC-CCceEEee-e--ceEEEeccCCCCCeEEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG-PDVEVYQE-L--GVLRFNNIATGDEGKYTCI 254 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~-~--~~l~i~~~~~~d~G~Y~C~ 254 (471)
.+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+... .++.+... + ..|.|.+++.+|+|.|+|.
T Consensus 3 ~~P~~~~~p-~~~~v~~G~~v~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 80 (305)
T 2nzi_A 3 MAPHFKEEL-RNLNVRYQSNATLVCKV-TGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (305)
T ss_dssp CCCEEEECC-CCEEECTTCCEEEEEEE-ECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEE
T ss_pred CCCeeeecc-cceEEeCCCcEEEEEEE-eCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEE
Confidence 356665554 45678999999999999 78889999999998775543 23333221 2 3799999999999999999
Q ss_pred EEcCCCceEEEEEEEEEeCCceeeCC----CccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--ccccCcee
Q psy17058 255 AENSAGKEVMNAYIHVLTLPAVTITP----SEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDELTSRA 328 (471)
Q Consensus 255 ~~~~~~~~~~~~~l~V~~~p~~~~~~----~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~~~~~ 328 (471)
+.|..+..+..+.|.|..+|.+.... .....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ........
T Consensus 81 a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~ 160 (305)
T 2nzi_A 81 ATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFT 160 (305)
T ss_dssp EEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEE
T ss_pred EEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCce
Confidence 99998888888889888766553321 1345788999999999999999999999999988764322 12233567
Q ss_pred EEEEee-cCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 329 VYTIAS-VRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 329 ~l~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
.|.|.+ +..+|+|.|+|.|.|..|..+.++.|.|...|
T Consensus 161 ~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P 199 (305)
T 2nzi_A 161 SLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVP 199 (305)
T ss_dssp EEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCC
T ss_pred EEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCC
Confidence 899999 99999999999999999999999999998876
No 95
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.92 E-value=1.2e-22 Score=194.64 Aligned_cols=176 Identities=20% Similarity=0.393 Sum_probs=143.7
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeC--CCCCCc-----CCCceEEe--eeceEEEeccCCCCCeEEEEEEEcCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRP--DNDGKF-----GPDVEVYQ--ELGVLRFNNIATGDEGKYTCIAENSA 259 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~--~~~~~~-----~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~ 259 (471)
....+.+|+.++|.|.+ .+.|.+.++|+|+ +..+.. ..++.+.. ..+.|.|.+++.+|+|.|+|.+.|..
T Consensus 8 ~~~~~~~G~~v~l~C~~-~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 86 (389)
T 2jll_A 8 KNETTYENGQVTLVCDA-EGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRI 86 (389)
T ss_dssp CCEEEETTSEEEEEEEE-ECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSS
T ss_pred CceEEeCCCeEEEEEEe-ecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCC
Confidence 34578899999999999 7899999999999 544322 23444432 24689999999999999999999999
Q ss_pred CceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc----cccccCceeEEEEeec
Q psy17058 260 GKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL----ERDELTSRAVYTIASV 335 (471)
Q Consensus 260 ~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~----~~~~~~~~~~l~i~~~ 335 (471)
|..+..+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++++..+.... ..........|.|.++
T Consensus 87 g~~~~~~~l~V~~~P~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~ 165 (389)
T 2jll_A 87 GGHQKSMYLDIEYAPKFISNQ-TIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPT 165 (389)
T ss_dssp CEEEEEEEEEEEEEEEECCSC-CEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCC
T ss_pred CCcceEEEEEEEeCCEEecCc-ceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCC
Confidence 998899999999988876543 33478899999999999999999999999998876432 1122344578999999
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 336 RESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 336 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
..+|+|.|+|.|.|..|.....+.|.+...|
T Consensus 166 ~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P 196 (389)
T 2jll_A 166 SDNDFGRYNCTATNHIGTRFQEYILALADVP 196 (389)
T ss_dssp STTSSEEEEEEEEETTEEEEEEEEEEECCCC
T ss_pred ChhhCEEEEEEEEcCCCcEEEEEEEEecCCC
Confidence 9999999999999999999888888887665
No 96
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.92 E-value=1.6e-23 Score=180.16 Aligned_cols=181 Identities=22% Similarity=0.327 Sum_probs=143.2
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC--CceEEe--eeceEEEeccCCCCCeEEEEEE
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP--DVEVYQ--ELGVLRFNNIATGDEGKYTCIA 255 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~ 255 (471)
+|.+... +....+.+|+.++|.|.+ .+.|.+.+.|++++..+.... +..+.. ....|.|.+++..|+|.|+|.+
T Consensus 5 ~P~~~~~-~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 5 APTFTQP-LQSVVVLEGSTATFEAHI-SGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp EEEEEEC-CCCEEEETTSCEEEEEEE-EEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCeEEcc-CCceEEECCCEEEEEEEE-EecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEE
Confidence 3444443 345678899999999999 777888999999988765443 333322 2347999999999999999999
Q ss_pred EcCCCceEEEEEEEEE---eCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--ccccCceeEE
Q psy17058 256 ENSAGKEVMNAYIHVL---TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDELTSRAVY 330 (471)
Q Consensus 256 ~~~~~~~~~~~~l~V~---~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~l 330 (471)
.|..+.....+.|.|. .+|.+...+ ....+.+|+.+.|.|.+.|+|.+.+.|++++..+..... ........+|
T Consensus 83 ~n~~~~~~~~~~l~v~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L 161 (194)
T 2a38_A 83 TNGSGQATSTAELLVKAETAPPNFVQRL-QSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSL 161 (194)
T ss_dssp EETTEEEEEEEEEEEECCCEEEEEEECC-CCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEE
T ss_pred EcCCceEeEEEEEEEccCCCCCEEEeCC-ccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEE
Confidence 9998888778888887 455555444 356889999999999999999999999999988764322 1122334589
Q ss_pred EEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 331 TIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 331 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
.|.++..+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 162 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 162 LIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 999999999999999999999999999988874
No 97
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.92 E-value=1.6e-23 Score=180.68 Aligned_cols=184 Identities=20% Similarity=0.282 Sum_probs=145.9
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC-CCceEEee-e--ceEEEeccCCCCCeEEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG-PDVEVYQE-L--GVLRFNNIATGDEGKYTCI 254 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~-~--~~l~i~~~~~~d~G~Y~C~ 254 (471)
.+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+... .++.+... + ..|.|.+++.+|+|.|+|.
T Consensus 3 ~~P~~~~~~-~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (197)
T 2j8h_A 3 MAPHFKEEL-RNLNVRYQSNATLVCKV-TGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (197)
T ss_dssp CCCEEEECC-CCEEEETTSCEEEEEEE-ECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEE
T ss_pred CCCEEEEcC-CccEEcCCCEEEEEEEE-eecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEE
Confidence 356655544 45678999999999999 68888999999998775543 23333321 2 2899999999999999999
Q ss_pred EEcCCCceEEEEEEEEEeCCceeeCC----CccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--ccccCcee
Q psy17058 255 AENSAGKEVMNAYIHVLTLPAVTITP----SEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDELTSRA 328 (471)
Q Consensus 255 ~~~~~~~~~~~~~l~V~~~p~~~~~~----~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~~~~~ 328 (471)
+.|..+.....+.|.|..+|.+...+ .....+.+|+.+.|.|.+.|+|.+.+.|++++..+..... ........
T Consensus 81 ~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~ 160 (197)
T 2j8h_A 81 ATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFT 160 (197)
T ss_dssp EEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEE
T ss_pred EEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCce
Confidence 99998888888899998776654322 1345788999999999999999999999999988753322 12234567
Q ss_pred EEEEee-cCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 329 VYTIAS-VRESDAGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 329 ~l~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
.|.|.+ +..+|+|.|+|.|.|..|..+.++.|.|.+
T Consensus 161 ~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 161 SLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp EEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 999999 999999999999999999999999998863
No 98
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.92 E-value=1.1e-23 Score=180.70 Aligned_cols=181 Identities=25% Similarity=0.476 Sum_probs=144.3
Q ss_pred CCeeeecCC-CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcC
Q psy17058 180 MPRIRIHPN-ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 180 ~p~~~~~~~-~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
+|.+.+... ....+.+|+.++|.|.+ .+.|.+.+.|++++..+....++.+......|.|.+++.+|+|.|+|.+.+.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRA-SGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEE-ECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEee-ccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEcc
Confidence 355544432 23456789999999999 6788899999999988766666666655678999999999999999999999
Q ss_pred CCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCC--ccCCCc-------ccccccCceeE
Q psy17058 259 AGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYI--APFDRN-------LERDELTSRAV 329 (471)
Q Consensus 259 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~--~~~~~~-------~~~~~~~~~~~ 329 (471)
.+.....+.|.|..+|.+...+ ...+.+|+.+.|.|.+.|+|.+.+.|++++ ..+... ...........
T Consensus 81 ~~~~~~~~~l~V~~~p~~~~~~--~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (192)
T 2va4_A 81 AGEDEKQAFLQVFVQPHIIQLK--NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSS 158 (192)
T ss_dssp TEEEEEEEEEEEEEEEEEEEEC--CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEE
T ss_pred ccccceEEEEEEEccCcccccC--cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceE
Confidence 8888888889998888776543 346778999999999999999999999983 333211 11111234578
Q ss_pred EEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 330 YTIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 330 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
|.|.+++.+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 159 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 159 LHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 9999999999999999999999999999998874
No 99
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.92 E-value=9.8e-24 Score=181.48 Aligned_cols=178 Identities=25% Similarity=0.325 Sum_probs=142.3
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCc----c-----cCcEEEEcCCCCCCCeEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNM----I-----AGETLIINGITKADEGVYICS 158 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~----~-----~~~~L~i~~v~~~D~G~Y~C~ 158 (471)
..+|.+...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+.... . ....|.|.+++.+|+|.|+|.
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 81 (194)
T 2a38_A 3 TQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRD-GQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLK 81 (194)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEES-SSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEEC-CEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEE
Confidence 45788888999999999999999999 7778889999998 55554332 1 345899999999999999999
Q ss_pred EEecCCceeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeec-
Q psy17058 159 IQNAQGNVFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELG- 236 (471)
Q Consensus 159 ~~~~~~~~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~- 236 (471)
+.+..+. ......+.|... .+|.+... .....+.+|+.++|.|.+ .+.|.+.+.|++++..+....++.+...+.
T Consensus 82 ~~n~~~~-~~~~~~l~v~~~~~~p~~~~~-~~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 158 (194)
T 2a38_A 82 ATNGSGQ-ATSTAELLVKAETAPPNFVQR-LQSMTVRQGSQVRLQVRV-TGIPTPVVKFYRDGAEIQSSLDFQISQEGDL 158 (194)
T ss_dssp EEETTEE-EEEEEEEEEECCCEEEEEEEC-CCCEEECTTEEEEEEEEE-EEESCCEEEEEETTEECCCSSSEEEEEETTE
T ss_pred EEcCCce-EeEEEEEEEccCCCCCEEEeC-CccEEEcCCCEEEEEEEE-EEecCCeEEEEECCEECCCCCcEEEEEcCCE
Confidence 9998776 555566666533 23444433 345678899999999999 778889999999998876666665554333
Q ss_pred -eEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 237 -VLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 237 -~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
.|.|.++..+|.|.|+|.+.|..|.....+.|.|
T Consensus 159 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 159 YSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 7999999999999999999999998888887776
No 100
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.91 E-value=1.1e-23 Score=193.38 Aligned_cols=221 Identities=16% Similarity=0.227 Sum_probs=150.0
Q ss_pred ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEee---eceEEEeccCCCCCeEEEEEEEcCCCc---eE
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQE---LGVLRFNNIATGDEGKYTCIAENSAGK---EV 263 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~ 263 (471)
...+.+|+.++|.|.+ .+. ++|++++..+. .+...... .+.|.|.+++.+|+|.|+|.+.|..|. ..
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~ 81 (289)
T 3mjg_X 9 ELVLNVSSTFVLTCSG-SAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDER 81 (289)
T ss_dssp EEECCTTCCEEEEEEE-SSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCC
T ss_pred eEEEeCCCcEEEEEec-cce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcE
Confidence 4567899999999998 443 99999988752 22222111 357999999999999999999998765 33
Q ss_pred EEEEEEEEeCCceeeCCCcc---EEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCC
Q psy17058 264 MNAYIHVLTLPAVTITPSEY---VSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDA 340 (471)
Q Consensus 264 ~~~~l~V~~~p~~~~~~~~~---~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 340 (471)
..+.|.|..+....+..... ..+.+|+.+.|.|.+. .|.+.+.|++.+........ ...... +. ...|+
T Consensus 82 ~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~--~~~~~~-~~----~~~d~ 153 (289)
T 3mjg_X 82 KRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVP--YDHQRG-FS----GIFED 153 (289)
T ss_dssp EEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCC--EETTTE-EE----ECCCS
T ss_pred EeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCcccee--ecCCcC-ee----eeccC
Confidence 44455544333322222212 5789999999999998 78888999887533221111 011111 11 35799
Q ss_pred eEEEEEEEcCCCceE-EEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcC
Q psy17058 341 GQYKCIGKNSAGTEE-KVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRP 419 (471)
Q Consensus 341 G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~ 419 (471)
|.|+|.|.|..+... ..+.|.|.... +|.+...+
T Consensus 154 G~Y~C~a~n~~~~~~s~~~~l~v~~~~---------------------------------------------~p~i~~~~ 188 (289)
T 3mjg_X 154 RSYICKTTIGDREVDSDAYYVYRLQVS---------------------------------------------SINVSVNA 188 (289)
T ss_dssp SEEEEEEEETTEEEECCCEEEEECCCC---------------------------------------------CCCCEEEE
T ss_pred cEEEEEEEeCCceeeeeeEEEEecCCC---------------------------------------------CCCcEEeC
Confidence 999999998776553 33567666531 57777777
Q ss_pred CeeeeeCCCeEEEEEEecccCCceEEEecCCCCCCCce----EE-------ecCeEEECCCC
Q psy17058 420 VRQTVKPGDIANIRCSAIGATPISIRWQPLQGYFPSHV----VE-------YNGELRLGPHK 470 (471)
Q Consensus 420 ~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~~l~~~~----~~-------~~~~l~i~~~~ 470 (471)
....+.+|+++.|.|.+.|.|.+.++|+++|+.+.... .. ..++|.|.+++
T Consensus 189 ~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 250 (289)
T 3mjg_X 189 VQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAE 250 (289)
T ss_dssp SCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCC
T ss_pred CcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccC
Confidence 77889999999999999999999999998877653321 11 33688888775
No 101
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.91 E-value=2.7e-23 Score=179.14 Aligned_cols=185 Identities=23% Similarity=0.374 Sum_probs=147.7
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeec--eEEEeccCCCCCeEEEEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELG--VLRFNNIATGDEGKYTCIAE 256 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C~~~ 256 (471)
.+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+....+..+...+. .|.|.+++.+|+|.|+|.+.
T Consensus 6 ~~P~~~~~~-~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (197)
T 3lcy_A 6 EAPGIRKEM-KDVTTKLGEAAQLSCQI-VGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIAT 83 (197)
T ss_dssp EEEEEEECC-CCEEEETTSEEEEEEEE-EEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEE
T ss_pred CCCcccccC-CceEEeCCCcEEEEEEE-ecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEE
Confidence 345554444 45678899999999999 678888999999988766555555544322 79999999999999999999
Q ss_pred cCCCceEEEEEEEEEeCCceeeC--CCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--ccccCceeEEEE
Q psy17058 257 NSAGKEVMNAYIHVLTLPAVTIT--PSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDELTSRAVYTI 332 (471)
Q Consensus 257 ~~~~~~~~~~~l~V~~~p~~~~~--~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~l~i 332 (471)
|..+.....+.|.|..+|.+... ......+.+|+.+.|.|.+.|+|.+.+.|++++..+..... .........|.|
T Consensus 84 n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i 163 (197)
T 3lcy_A 84 NEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVM 163 (197)
T ss_dssp CSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEE
T ss_pred CCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEE
Confidence 99888888888988877765532 12345778999999999999999999999999988764322 222334478999
Q ss_pred eecCC-CCCeEEEEEEEcCCCceEEEEEEEEecC
Q psy17058 333 ASVRE-SDAGQYKCIGKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 333 ~~~~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 365 (471)
.++.. +|+|.|+|.|.|..|..+.++.|.|.++
T Consensus 164 ~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~k 197 (197)
T 3lcy_A 164 KNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQDK 197 (197)
T ss_dssp SSCCHHHHCEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred ccccchhhCceEEEEEEcCcCceEEEEEEEEecC
Confidence 99985 8999999999999999999999998753
No 102
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.91 E-value=1.4e-23 Score=182.06 Aligned_cols=170 Identities=16% Similarity=0.195 Sum_probs=132.8
Q ss_pred ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeee----ceEEEeccCCCCCeEEEEEEEcCCCceEEE
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQEL----GVLRFNNIATGDEGKYTCIAENSAGKEVMN 265 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 265 (471)
...+.+|+.+.|.|.+..+.|.+.++|++++..+..+.++.+..+. ..|.|.+++.+|+|.|+|.+.| +.....
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~~ 88 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATNH 88 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEEE
Confidence 3568899999999999666899999999999987766666654422 2699999999999999999999 444433
Q ss_pred EEEEEE---------------------eCCceeeCCCccEEecCCCcEEEEEEEeec-CCCeEEEEeCCccCCCcccccc
Q psy17058 266 AYIHVL---------------------TLPAVTITPSEYVSVRPGEPLTLECEATGR-PMPTVSWVKYIAPFDRNLERDE 323 (471)
Q Consensus 266 ~~l~V~---------------------~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~~i~W~~~~~~~~~~~~~~~ 323 (471)
..+.+. .+|.+...+ ...+.+|+.+.|.|.+.|. |.|.+.|+|++..+........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~--~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~~ 166 (207)
T 3rbs_A 89 STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL--SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF 166 (207)
T ss_dssp EEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE--EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCCC
T ss_pred EEEEEEccchhhhcccccccccccccCCCCceEecC--CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceEc
Confidence 333221 134443322 3578899999999999998 9999999999998865433233
Q ss_pred cCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 324 LTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 324 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
.....+|.|.+++.+|+|.|+|.|.|..|..+.++.|.+.
T Consensus 167 ~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 167 KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp SSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred CCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 3455689999999999999999999999999998888653
No 103
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.91 E-value=1e-23 Score=198.61 Aligned_cols=240 Identities=14% Similarity=0.195 Sum_probs=151.7
Q ss_pred CceeEEcCCeEEEEEEccCCC--CCCeEEEEeCC--CCCC-----------------cCCCceEEee----eceEEEecc
Q psy17058 189 ASQTFIVGDRADIQCVLEAGE--PSPTQTWIRPD--NDGK-----------------FGPDVEVYQE----LGVLRFNNI 243 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~--p~~~v~W~~~~--~~~~-----------------~~~~~~~~~~----~~~l~i~~~ 243 (471)
....+.+|+.++|.|.+ .+. +.+.+.|+|+. ..+. ...++.+..+ ...|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 8 GAEVVKPGASVKISCKA-SGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCEEECTTCCEEEEEEE-ESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCeEEeCCCcEEEEEEc-CCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 34578899999999999 444 46789999973 3211 1234444432 347999999
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CC-CeEEEEeCCccCCC
Q psy17058 244 ATGDEGKYTCIAENSAGKEVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PM-PTVSWVKYIAPFDR 317 (471)
Q Consensus 244 ~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~i~W~~~~~~~~~ 317 (471)
+.+|+|.|.|.+.|..+.......|.|.. +|.+...+. ...+.+|+.+.|.|.+.|. |. +.+.|++++..+..
T Consensus 87 ~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~ 165 (344)
T 1za6_B 87 RSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGV 165 (344)
T ss_dssp CGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECC-SCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTE
T ss_pred CcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccc-cccccCCCcEEEEEEEeeEECCCeEEEEecCCccCce
Confidence 99999999999998654444456777763 344443322 1245789999999999986 65 69999999876431
Q ss_pred cc------cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC---CCCCCCCCCCCccccCCCcccC
Q psy17058 318 NL------ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP---EYGPISPRPGADILPDGDEYYR 388 (471)
Q Consensus 318 ~~------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p---~~~~~~~~~~~~~~~~~~~w~~ 388 (471)
.. ........+.|.|..+..+| |.|+|.|.|..+.......+.+.... ..++...........
T Consensus 166 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~------- 237 (344)
T 1za6_B 166 HTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSG------- 237 (344)
T ss_dssp EECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------------
T ss_pred eECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccC-------
Confidence 10 00111234578999888888 99999999998875444333211000 000000000000000
Q ss_pred CCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEecccCC--ceEEEecCCCCCCCce
Q psy17058 389 PEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGATP--ISIRWQPLQGYFPSHV 457 (471)
Q Consensus 389 ~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~v~W~~~g~~l~~~~ 457 (471)
-...+|.+.+.+.......|+.+.|.|.+.|.++ +.|+|+|||++|....
T Consensus 238 -------------------~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~ 289 (344)
T 1za6_B 238 -------------------GQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYK 289 (344)
T ss_dssp --------------------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEE
T ss_pred -------------------CCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcE
Confidence 0013577766554433334667999999999633 5899999999987543
No 104
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.91 E-value=1.1e-23 Score=180.93 Aligned_cols=183 Identities=28% Similarity=0.473 Sum_probs=145.0
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc-CCCceEEeeeceEEEeccCCCCCeEEEEEEEcC
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF-GPDVEVYQELGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
+|.+. .+.....+.+|+.++|.|.+ .+.|.+.+.|++++..+.. ..++.+...+..|.|.+++.+|+|.|+|.+.|.
T Consensus 7 ~P~i~-~~~~~~~~~~G~~v~l~C~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 84 (192)
T 2iep_A 7 APVIT-TPLETVDALVEEVATFMCAV-ESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNG 84 (192)
T ss_dssp EEEES-SCCCEEEEETTSCEEEECCE-EEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECS
T ss_pred Cceee-cCccceeeeCCCcEEEEeeC-CCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcC
Confidence 34433 33445678899999999999 6778889999999876544 345555555667999999999999999999998
Q ss_pred CCc-eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCC
Q psy17058 259 AGK-EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRE 337 (471)
Q Consensus 259 ~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 337 (471)
.+. ......|.|..+|.+...+. ...+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ......+.|.|.++..
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~~~~~~~~L~i~~~~~ 162 (192)
T 2iep_A 85 VGGAVESCGALQVKMKPKITRPPI-NVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSR-IAVLESGSLRIHNVQK 162 (192)
T ss_dssp SSCCEEEEEEEEEEEEEEEEECCC-CEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSS-EEECTTSCEEESSCCG
T ss_pred CCceeEeEEEEEEEeCCccccCCc-ceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCc-EEEecCCcEEEecCCh
Confidence 776 56677888888888776543 56788999999999999999999999999988764432 1223345799999999
Q ss_pred CCCeEEEEEEEcCCCce-EEEEEEEEecCC
Q psy17058 338 SDAGQYKCIGKNSAGTE-EKVITVAVEHRP 366 (471)
Q Consensus 338 ~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p 366 (471)
+|+|.|+|.|.|..|.. +..+.|.|..+|
T Consensus 163 ~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 163 EDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred hhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 99999999999999988 456888887653
No 105
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.91 E-value=9.4e-23 Score=174.77 Aligned_cols=176 Identities=20% Similarity=0.256 Sum_probs=138.7
Q ss_pred CCeeeecCCCceeEEc-CCeEEEEEEccCCCCC--CeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEE
Q psy17058 180 MPRIRIHPNASQTFIV-GDRADIQCVLEAGEPS--PTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAE 256 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~-g~~~~L~C~~~~~~p~--~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 256 (471)
+|.+... . ...+.+ |+.++|.|.+ .+.|. +.+.|++++..+....... .+..|.|.+++.+|+|.|+|.+.
T Consensus 3 ~P~i~~~-~-~~~v~~~G~~v~l~C~~-~~~~~~~~~v~W~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~ 76 (190)
T 2wv3_A 3 EPRIVTS-E-EVIIRDSLLPVTLQCNL-TSSSHTLMYSYWTKNGVELTATRKNA---SNMEYRINKPRAEDSGEYHCVYH 76 (190)
T ss_dssp CCEEEEC-C-CEECCCSSSCEEEEEEE-EECSSCEEEEEEEETTEECTTCCBCC---SEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCccccc-c-eEEEccCCceEEEEEEe-ccCCCCceEEEEEECCEECcccceEe---ccEEEEEecCCcccCEEEEEEEE
Confidence 4555442 2 334556 9999999999 55665 7999999987754432221 36789999999999999999999
Q ss_pred cCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEe--CCccCCC-----cccccccCceeE
Q psy17058 257 NSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVK--YIAPFDR-----NLERDELTSRAV 329 (471)
Q Consensus 257 ~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~--~~~~~~~-----~~~~~~~~~~~~ 329 (471)
|. +.....+.|.|..+|.+...+. ...+.+|+.+.|.|.+.|+|.+.+.|++ ++..+.. ...........+
T Consensus 77 n~-~~~~~~~~l~V~~~p~~~~~~~-~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 154 (190)
T 2wv3_A 77 FV-SAPKANATIEVKAAPDITGHKR-SENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTE 154 (190)
T ss_dssp ET-TEEEEEEEEEEECCCEEEEECS-EEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEE
T ss_pred eC-CcccccEEEEEecCCcccccCC-cceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeE
Confidence 99 8888899999999998877653 4678999999999999999999999999 5554421 111112234468
Q ss_pred EEEeecC-CCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 330 YTIASVR-ESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 330 l~i~~~~-~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
|.|.++. .+|+|.|+|.|.|..|....++.|.|.
T Consensus 155 L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 155 LNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 9999999 799999999999999999999888875
No 106
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.91 E-value=4.3e-23 Score=176.59 Aligned_cols=173 Identities=26% Similarity=0.456 Sum_probs=135.2
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC--CCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCce--EE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG--PDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKE--VM 264 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~ 264 (471)
....+.+|+.++|.|.+ .+.|.+.+.|++++..+... .++.... ++.|.|.+++.+|+|.|+|.+.+..+.. ..
T Consensus 10 ~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 87 (189)
T 2v5t_A 10 SPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAMLA-NNNLQILNINKSDEGIYRCEGRVEARGEIDFR 87 (189)
T ss_dssp SSEEEETTSCEEECCEE-ECSSCCEEEEEC-----CBCCCTTEEECT-TSCEEETTCCGGGCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEeCCCcEEEEEEE-cCCCCCEEEEEECCccceeccCCeEEEec-CCCEEEeeCCHhHCcEEEEEEEEcCCCceEEE
Confidence 45678999999999999 67788999999998875532 2333323 5679999999999999999999886543 35
Q ss_pred EEEEEEEeCCceeeCCCc-cEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEE
Q psy17058 265 NAYIHVLTLPAVTITPSE-YVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQY 343 (471)
Q Consensus 265 ~~~l~V~~~p~~~~~~~~-~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 343 (471)
.+.+.+..+|.+...+.. ...+.+|+.+.|.|.+.|.|.+.+.|++++..+..............|.|.++..+|+|.|
T Consensus 88 ~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 167 (189)
T 2v5t_A 88 DIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPY 167 (189)
T ss_dssp EEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEE
T ss_pred EEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCeeE
Confidence 567777777776654432 3467889999999999999999999999998876544333344567899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEe
Q psy17058 344 KCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 344 ~C~a~n~~g~~~~~~~l~V~ 363 (471)
+|.|.|..|....++.|.|.
T Consensus 168 ~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 168 VCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeCCCceeEEEEEEEE
Confidence 99999999999988888875
No 107
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.91 E-value=7.8e-23 Score=178.57 Aligned_cols=184 Identities=27% Similarity=0.512 Sum_probs=145.3
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC-cCCCceEEee-e--ceEEEeccCC-CCCeEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK-FGPDVEVYQE-L--GVLRFNNIAT-GDEGKYTC 253 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~-~~~~~~~~~~-~--~~l~i~~~~~-~d~G~Y~C 253 (471)
.+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+. ...++.+... + ..|.|.+++. .|+|.|+|
T Consensus 5 ~pP~~~~~p-~~~~v~~G~~v~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 5 HPPEIIRKP-QNQGVRVGGVASFYCAA-RGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp CCCEEEECC-CCEEEETTSCEEEEEEE-ECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEE
T ss_pred CCCEEEcCC-CceEEecCCEEEEEEEE-ccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEE
Confidence 456666654 45678999999999999 678889999999988765 3334444321 2 4799999999 99999999
Q ss_pred EEEcCCCc-eEEEEEEEEEeC-------CceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccC
Q psy17058 254 IAENSAGK-EVMNAYIHVLTL-------PAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELT 325 (471)
Q Consensus 254 ~~~~~~~~-~~~~~~l~V~~~-------p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~ 325 (471)
.+.|..+. .+..+.|.|... |.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++++..+....... ..
T Consensus 83 ~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~-~~ 160 (212)
T 2yd1_A 83 VAENGVGDAVSADATLTIYEGDKTPAGFPVITQGP-GTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRY-SL 160 (212)
T ss_dssp EEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECC-CCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTE-EE
T ss_pred EEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCC-CceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeE-Ec
Confidence 99999888 778889999875 5555544 34678899999999999999999999999998876432211 22
Q ss_pred ceeEEEEeecCCCCCeEEEEEEEcCCCceEEE-EEEEEecCC
Q psy17058 326 SRAVYTIASVRESDAGQYKCIGKNSAGTEEKV-ITVAVEHRP 366 (471)
Q Consensus 326 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p 366 (471)
..+.|.|.++..+|+|.|+|.|.|..|..... +.|.|....
T Consensus 161 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 161 KDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp ETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred cCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 34589999999999999999999999998765 899998764
No 108
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.91 E-value=2e-23 Score=178.72 Aligned_cols=178 Identities=24% Similarity=0.412 Sum_probs=137.6
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCC----cc--cCcEEEEcCCCCCCCeEEEEEEEecC
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPN----MI--AGETLIINGITKADEGVYICSIQNAQ 163 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~----~~--~~~~L~i~~v~~~D~G~Y~C~~~~~~ 163 (471)
+|.|...|.+..+.+|+++.|.|. .+.|.+.+.|+++ +..+... .. .++.|.|.+++.+|+|.|+|.+.+..
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 80 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYH-NEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEA 80 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC------CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETT
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEEC-CccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcC
Confidence 577888889999999999999999 7778899999999 4443311 11 45689999999999999999999887
Q ss_pred CceeeeeEEEEEeeccCCeeeecCCC-ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEec
Q psy17058 164 GNVFQDYASIQVDKREMPRIRIHPNA-SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNN 242 (471)
Q Consensus 164 ~~~~~~~~~l~v~~~~~p~~~~~~~~-~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~ 242 (471)
+. ......+.+.+..+|.+...... ...+.+|+.++|.|.+ .+.|.+.+.|++++..+.....+.+....+.|.|.+
T Consensus 81 ~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~ 158 (189)
T 2v5t_A 81 RG-EIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRA-SGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRN 158 (189)
T ss_dssp TT-EEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEE-EEESCCEEEEEETTEECCCSSSEEEETTTTEEEECS
T ss_pred CC-ceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEE-ccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcC
Confidence 55 33334444544455655443322 3345689999999999 677889999999998776666666655567899999
Q ss_pred cCCCCCeEEEEEEEcCCCceEEEEEEEEE
Q psy17058 243 IATGDEGKYTCIAENSAGKEVMNAYIHVL 271 (471)
Q Consensus 243 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 271 (471)
+..+|+|.|+|.+.|..|....++.|.|.
T Consensus 159 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 159 IINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 99999999999999999988888888875
No 109
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.90 E-value=3.1e-23 Score=178.87 Aligned_cols=165 Identities=15% Similarity=0.207 Sum_probs=122.8
Q ss_pred eeEEcCCeEEEEEEcc--CCCCCCeEEEEeCCCCCCc-----------------CCCceEEe--eeceEEEeccCCCCCe
Q psy17058 191 QTFIVGDRADIQCVLE--AGEPSPTQTWIRPDNDGKF-----------------GPDVEVYQ--ELGVLRFNNIATGDEG 249 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~--~~~p~~~v~W~~~~~~~~~-----------------~~~~~~~~--~~~~l~i~~~~~~d~G 249 (471)
.++..|+.++|.|.+. .+.|.+.++|+|++..... ...+.+.. ....|.|.+++.+|+|
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 82 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDG 82 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCe
Confidence 4678999999999532 5678899999998765321 11112211 2346999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCc------ccccc
Q psy17058 250 KYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRN------LERDE 323 (471)
Q Consensus 250 ~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~------~~~~~ 323 (471)
.|+|.+.|..+..+..+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .....
T Consensus 83 ~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~-~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~ 161 (203)
T 4fa8_A 83 NYLCRMKLGETEVTKQEHLSVVKPLTLSVHS-ERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEK 161 (203)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEEEEEEEE-EECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECT
T ss_pred EEEEEEEcCCCcEEEEEEEEecCCceeeecc-eeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeC
Confidence 9999999999988889999998877766554 3457789999999999999999999999876554321 11111
Q ss_pred cCceeEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy17058 324 LTSRAVYTIASVRESDAGQYKCIGKNSAGTEEK 356 (471)
Q Consensus 324 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 356 (471)
...-..+.|.+++.+|+|.|+|.|.|..|....
T Consensus 162 ~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 162 DGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp TSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 222345667799999999999999999998865
No 110
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.90 E-value=1.8e-22 Score=176.18 Aligned_cols=182 Identities=24% Similarity=0.451 Sum_probs=140.3
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCC-CCcc--------cCcEEEEcCCCC-CCCeEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLP-PNMI--------AGETLIINGITK-ADEGVYIC 157 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~-~~~~--------~~~~L~i~~v~~-~D~G~Y~C 157 (471)
..+|.|...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+. .... ....|.|.+++. +|+|.|+|
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKN-GKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEET-TEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEEC-CEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEE
Confidence 46899999999999999999999999 8888899999999 55553 1111 125899999999 99999999
Q ss_pred EEEecCCceeeeeEEEEEeecc-----CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEE
Q psy17058 158 SIQNAQGNVFQDYASIQVDKRE-----MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVY 232 (471)
Q Consensus 158 ~~~~~~~~~~~~~~~l~v~~~~-----~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~ 232 (471)
.+.|..+........|.|.... .|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+........
T Consensus 83 ~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~-~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~- 159 (212)
T 2yd1_A 83 VAENGVGDAVSADATLTIYEGDKTPAGFPVITQGP-GTRVIEVGHTVLMTCKA-IGNPTPNIYWIKNQTKVDMSNPRYS- 159 (212)
T ss_dssp EEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECC-CCEEEETTCCEEECCEE-ECSSCCEEEEEETTEECCTTSTTEE-
T ss_pred EEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCC-CceEeecCCeEEEEEEe-ccCCCCeEEEEECCeEcccCCCeEE-
Confidence 9999877634555566665321 14554444 44567899999999999 7889999999999887554333222
Q ss_pred eeeceEEEeccCCCCCeEEEEEEEcCCCceEEE-EEEEEEeCC
Q psy17058 233 QELGVLRFNNIATGDEGKYTCIAENSAGKEVMN-AYIHVLTLP 274 (471)
Q Consensus 233 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~V~~~p 274 (471)
..++.|.|.+++.+|.|.|+|.|.|..|..... +.|.|...+
T Consensus 160 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 160 LKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp EETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred ccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 236689999999999999999999999887654 788887543
No 111
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.90 E-value=1.6e-22 Score=174.16 Aligned_cols=176 Identities=20% Similarity=0.400 Sum_probs=140.0
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC--CceEEee---------eceEEEeccCCCCC
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP--DVEVYQE---------LGVLRFNNIATGDE 248 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~---------~~~l~i~~~~~~d~ 248 (471)
+|.+...+ ....+.+|+.++|.|.+..+.|.+.+.|++++..+.... +..+... .+.|.|.+++..|+
T Consensus 2 ~~~~~~~p-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 2 ESPFVGNP-GNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp CCSEEECC-CCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCeeccCh-hheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 34444444 466788999999999993278889999999988755442 1222111 35799999999999
Q ss_pred eEEEEEEEcCCCceE-EEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCC-eEEEEeCCccCCCcccccccCc
Q psy17058 249 GKYTCIAENSAGKEV-MNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMP-TVSWVKYIAPFDRNLERDELTS 326 (471)
Q Consensus 249 G~Y~C~~~~~~~~~~-~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~i~W~~~~~~~~~~~~~~~~~~ 326 (471)
|.|+|.+.|..+... ..+.|.|..+|.+...+. ...+.+|+.+.|.|.+.|.|.+ .+.|++++..+...... ..
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~---~~ 156 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPE-DRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH---GP 156 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSCEEEECCC-CEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS---SC
T ss_pred cEEEEEEEeCCCceecccEEEEEecCCeEEcCCC-cEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc---CC
Confidence 999999999876543 348889988888877654 4688899999999999999999 99999999887654331 56
Q ss_pred eeEEEEeecCCCCCeEEEEEEEcCCCceE-EEEEEEE
Q psy17058 327 RAVYTIASVRESDAGQYKCIGKNSAGTEE-KVITVAV 362 (471)
Q Consensus 327 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V 362 (471)
...|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 157 ~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 157 QRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 7889999987 78999999999999885 7888888
No 112
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.90 E-value=4.1e-24 Score=199.48 Aligned_cols=217 Identities=11% Similarity=0.164 Sum_probs=142.1
Q ss_pred CeEEEEEEccCCCC-CCeEEEEeCCCCCCcCCCc--eEE-----eeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 197 DRADIQCVLEAGEP-SPTQTWIRPDNDGKFGPDV--EVY-----QELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYI 268 (471)
Q Consensus 197 ~~~~L~C~~~~~~p-~~~v~W~~~~~~~~~~~~~--~~~-----~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 268 (471)
+.++|.|.+....| .+.++|+|+|..+...... ... ...+.|.|.....+|+|.|+|++.|..+.....+.+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 69999999954445 4799999998775433211 011 112357788887789999999999976554433322
Q ss_pred EE---EeCCceeeCCCccEEecCCCcEEEEEEEeec-CCC---eEEEEeCC-ccCCCcccc------cccCceeEEEEee
Q psy17058 269 HV---LTLPAVTITPSEYVSVRPGEPLTLECEATGR-PMP---TVSWVKYI-APFDRNLER------DELTSRAVYTIAS 334 (471)
Q Consensus 269 ~V---~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~---~i~W~~~~-~~~~~~~~~------~~~~~~~~l~i~~ 334 (471)
.+ ...|.+.+.++....+.+|+++.|.|.+.|. |.+ .+.|++++ ..+...... ......+.|.|.+
T Consensus 105 ~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~ 184 (323)
T 2wqr_A 105 CADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGT 184 (323)
T ss_dssp CCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCH
T ss_pred CCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECH
Confidence 11 1234444444444457889999999999985 556 89999975 443321110 0112345899999
Q ss_pred cCCCCCeEEEEEEEcCCCceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCe
Q psy17058 335 VRESDAGQYKCIGKNSAGTEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPR 414 (471)
Q Consensus 335 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~ 414 (471)
++.+|+|.|+|.|.|..+.......+.+.... ..+|.
T Consensus 185 ~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~-------------------------------------------~~~P~ 221 (323)
T 2wqr_A 185 RDWIEGETYQCRVTHPHLPRALMRSTTKTSGP-------------------------------------------RAAPE 221 (323)
T ss_dssp HHHHTTCCEEEEEECTTSSSCEEEEECCCCSC-------------------------------------------CBCCE
T ss_pred HHccCCCCEEEEEECCCCCCCeeeEEEccCCC-------------------------------------------CCCCE
Confidence 99999999999999987544333333222100 12577
Q ss_pred eEEcCCeeeeeCCCeEEEEEEeccc-CCc-eEEEecCCCCCCCc
Q psy17058 415 ITLRPVRQTVKPGDIANIRCSAIGA-TPI-SIRWQPLQGYFPSH 456 (471)
Q Consensus 415 ~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~v~W~~~g~~l~~~ 456 (471)
+.+.+.......|+.+.|.|.+.|. |++ .|+|+|||++|...
T Consensus 222 v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 265 (323)
T 2wqr_A 222 VYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDA 265 (323)
T ss_dssp EEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGG
T ss_pred EEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCC
Confidence 6654433223349999999999984 443 89999999998754
No 113
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.90 E-value=2.5e-22 Score=175.31 Aligned_cols=185 Identities=28% Similarity=0.464 Sum_probs=139.6
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEe---eeceEEEecc-CCCCCeEEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQ---ELGVLRFNNI-ATGDEGKYTCI 254 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~---~~~~l~i~~~-~~~d~G~Y~C~ 254 (471)
.+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+.......... ....|.|.++ +.+|+|.|+|.
T Consensus 5 ~~P~~~~~p-~~~~v~~G~~v~L~C~~-~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 82 (212)
T 2yd6_A 5 TPPRFTRTP-VDQTGVSGGVASFICQA-TGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECV 82 (212)
T ss_dssp EEEEEEECC-CCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEE
T ss_pred CCCeEEeCc-ceeEEecCCeEEEEEEE-eeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEE
Confidence 345555544 45678899999999999 678889999999988754332221111 2456999999 59999999999
Q ss_pred EEcCCCceEEEEEEEEEeC-------CceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc-----ccc
Q psy17058 255 AENSAGKEVMNAYIHVLTL-------PAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL-----ERD 322 (471)
Q Consensus 255 ~~~~~~~~~~~~~l~V~~~-------p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~-----~~~ 322 (471)
+.|..+.....+.|.|... |.+...+ ....+.+|+.+.|.|.+.|+|.+.+.|++++..+.... ...
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~ 161 (212)
T 2yd6_A 83 ASNNVGEISVSTRLTVLREDQIPRGFPTIDMGP-QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQL 161 (212)
T ss_dssp EEETTEEEEEEEEEEEECGGGCCTTCCEEEECC-CCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEE
T ss_pred EEcCCCcEEEEEEEEEeccCccCCCcceeecCC-cceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEE
Confidence 9999888888888998864 4454443 34578899999999999999999999999998876431 111
Q ss_pred ccCceeEEEEeecCCCCCeEEEEEEEcCCCceE-EEEEEEEecCC
Q psy17058 323 ELTSRAVYTIASVRESDAGQYKCIGKNSAGTEE-KVITVAVEHRP 366 (471)
Q Consensus 323 ~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p 366 (471)
.......|.|.+++.+|+|.|+|.|.|..|... ..+.|.|...+
T Consensus 162 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 162 RSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp EETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred ecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 123468999999999999999999999999875 44777777654
No 114
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.90 E-value=1.2e-22 Score=175.10 Aligned_cols=178 Identities=23% Similarity=0.381 Sum_probs=139.0
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCC-cc------cC--cEEEEcCCCCCCCeEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPN-MI------AG--ETLIINGITKADEGVYICS 158 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~-~~------~~--~~L~i~~v~~~D~G~Y~C~ 158 (471)
+.+|.|...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+... .. .+ ..|.|.+++.+|+|.|+|.
T Consensus 2 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (197)
T 2j8h_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQ-GKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (197)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEET-TEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEE
T ss_pred CCCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEEC-CEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEE
Confidence 46889999999999999999999999 7888899999999 5444322 11 12 3899999999999999999
Q ss_pred EEecCCceeeeeEEEEEeeccCCeeeecC----CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEe-
Q psy17058 159 IQNAQGNVFQDYASIQVDKREMPRIRIHP----NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQ- 233 (471)
Q Consensus 159 ~~~~~~~~~~~~~~l~v~~~~~p~~~~~~----~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~- 233 (471)
+.|..+. ......|.|. .+|.+.... .....+.+|+.++|.|.+ .+.|.+.+.|++++..+....++.+..
T Consensus 81 ~~n~~g~-~~~~~~l~V~--~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~ 156 (197)
T 2j8h_A 81 ATNQGGS-VSGTASLEVE--VPAKIHLPKTLEGMGAVHALRGEVVSIKIPF-SGKPDPVITWQKGQDLIDNNGHYQVIVT 156 (197)
T ss_dssp EEETTEE-EEEEEEEEEE--EEEEECCSSCBTTBEEEEEETTCCCEEEEEE-EEESCCEEEEEESSCEECSSSSCEEEEC
T ss_pred EEECCCc-eeEEEEEEEc--CCCcCCCCccccccCeEEEeCCCEEEEEEEE-EecCCCcEEEEECCEEeecCCCEEEEEc
Confidence 9998766 5555555554 333332211 133457789999999999 688899999999998766555555443
Q ss_pred -eeceEEEec-cCCCCCeEEEEEEEcCCCceEEEEEEEEE
Q psy17058 234 -ELGVLRFNN-IATGDEGKYTCIAENSAGKEVMNAYIHVL 271 (471)
Q Consensus 234 -~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 271 (471)
....|.|.+ +..+|.|.|+|.+.|..|..+..+.|.|.
T Consensus 157 ~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 157 RSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp SSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 245799999 99999999999999999998888888875
No 115
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.90 E-value=2e-22 Score=179.69 Aligned_cols=178 Identities=20% Similarity=0.385 Sum_probs=139.3
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCc---eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDV---EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMN 265 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~---~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 265 (471)
....+.+|+.++|.|.+ .+.|.+.+.|++++..+...... ........|.|.+++..|+|.|+|.+.|..+.....
T Consensus 23 ~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 101 (241)
T 3grw_A 23 KLLAVPAANTVRFRCPA-AGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT 101 (241)
T ss_dssp CEEEEETTSEEEEECCE-ECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred cceEEcCCCeEEEEEEe-cCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEE
Confidence 34678899999999999 67888999999998875543322 334446689999999999999999999988888888
Q ss_pred EEEEEEeC----CceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEe----CCccCCCcccc----------cccCce
Q psy17058 266 AYIHVLTL----PAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVK----YIAPFDRNLER----------DELTSR 327 (471)
Q Consensus 266 ~~l~V~~~----p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~----~~~~~~~~~~~----------~~~~~~ 327 (471)
+.|.|... |.+.........+.+|+.+.|.|.+.+.|.+.+.|++ ++..+...... ......
T Consensus 102 ~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (241)
T 3grw_A 102 YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEAD 181 (241)
T ss_dssp EEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEE
T ss_pred EEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCc
Confidence 88888762 3344444455678899999999999999999999999 77666432110 112346
Q ss_pred eEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCCC
Q psy17058 328 AVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRPE 367 (471)
Q Consensus 328 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 367 (471)
..|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.
T Consensus 182 ~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 221 (241)
T 3grw_A 182 VRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRA 221 (241)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-----
T ss_pred eEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCC
Confidence 7899999999999999999999999999999999988763
No 116
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.90 E-value=3.1e-22 Score=171.37 Aligned_cols=171 Identities=22% Similarity=0.349 Sum_probs=132.5
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEe-CCCCCCcCCCceEEeee--ceEEEeccCCCCCeEEEEEEEcCCCce-EE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIR-PDNDGKFGPDVEVYQEL--GVLRFNNIATGDEGKYTCIAENSAGKE-VM 264 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~ 264 (471)
....+.+|+.++|.|.+ .+.|. .+.|++ ++..+....++.+...+ ..|.|.+++.+|+|.|+|.+.|..+.. +.
T Consensus 10 ~~~~v~~G~~v~L~C~~-~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~ 87 (189)
T 2v44_A 10 SKVELSVGESKFFTCTA-IGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEA 87 (189)
T ss_dssp SEEEEETTCCEEEEEEE-EECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEE
T ss_pred CceEEecCCcEEEEEEe-ecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEE
Confidence 45578899999999999 66666 999999 66655555555554432 489999999999999999999987765 67
Q ss_pred EEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCc-ccccccCceeEEEEeecCCCCCeEE
Q psy17058 265 NAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRN-LERDELTSRAVYTIASVRESDAGQY 343 (471)
Q Consensus 265 ~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y 343 (471)
.+.|.|..+|.+...+. ...+.+|+.+.|.|.+.|.|.+.+.|++++..+... .........+.|.|.+++.+|+|.|
T Consensus 88 ~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 166 (189)
T 2v44_A 88 TVVLEIYQKLTFREVVS-PQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIY 166 (189)
T ss_dssp EEEEEEECCCEEESCCC-SEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEE
T ss_pred EEEEEEecCCceeecCC-cEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEE
Confidence 78899988887765543 467889999999999999999999999999877521 1112233445899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEE
Q psy17058 344 KCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 344 ~C~a~n~~g~~~~~~~l~V 362 (471)
+|.|.|..|.......+.|
T Consensus 167 ~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 167 RCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp EEEEEETTTTEEEEEEEEE
T ss_pred EEEEEccccCceeeeeEEE
Confidence 9999999977755444433
No 117
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.90 E-value=2.7e-23 Score=178.35 Aligned_cols=180 Identities=26% Similarity=0.503 Sum_probs=139.6
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCC---cc---cCcEEEEcCCCCCCCeEEEEEEEe
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPN---MI---AGETLIINGITKADEGVYICSIQN 161 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~---~~---~~~~L~i~~v~~~D~G~Y~C~~~~ 161 (471)
+.+|.|...+....+.+|+++.|.|. .+.|.+.+.|+++ +..+... .. .+..|.|.+++.+|+|.|+|.+.+
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRN-KILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEET-TEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEEC
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEEC-CEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEc
Confidence 45677777788889999999999999 7788889999998 5444321 11 456799999999999999999998
Q ss_pred cCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEe
Q psy17058 162 AQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFN 241 (471)
Q Consensus 162 ~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~ 241 (471)
..+........+.|. .+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+....++.... .+.|.|.
T Consensus 84 ~~~~~~~~~~~l~v~--~~p~~~~~~-~~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~-~~~L~i~ 158 (192)
T 2iep_A 84 GVGGAVESCGALQVK--MKPKITRPP-INVKIIEGLKAVLPCTT-MGNPKPSVSWIKGDSALRENSRIAVLE-SGSLRIH 158 (192)
T ss_dssp SSSCCEEEEEEEEEE--EEEEEEECC-CCEEEETTSCEEECCEE-EEESCCEEEEEETTEECCCCSSEEECT-TSCEEES
T ss_pred CCCceeEeEEEEEEE--eCCccccCC-cceEEeCCCcEEEEEEE-eccCCceEEEEeCCEEccCCCcEEEec-CCcEEEe
Confidence 876633444455554 455555443 35678899999999999 778889999999988766555554444 5689999
Q ss_pred ccCCCCCeEEEEEEEcCCCce-EEEEEEEEEeCC
Q psy17058 242 NIATGDEGKYTCIAENSAGKE-VMNAYIHVLTLP 274 (471)
Q Consensus 242 ~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~p 274 (471)
++..+|+|.|+|.+.|..|.. +..+.|.|..+|
T Consensus 159 ~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 159 NVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred cCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 999999999999999998876 456788887654
No 118
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.90 E-value=1.8e-22 Score=171.75 Aligned_cols=166 Identities=22% Similarity=0.465 Sum_probs=135.5
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEee----eceEEEeccCCCCCeEEEEEEEcCCCc-eE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQE----LGVLRFNNIATGDEGKYTCIAENSAGK-EV 263 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~ 263 (471)
....+.+|+.++|.|.+ .+.|.+.+.|++++..+.......+... .+.|.|.+++.+|+|.|+|.+.+..+. .+
T Consensus 10 ~~~~v~~G~~v~l~C~~-~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 88 (182)
T 1rhf_A 10 VKLTVSQGQPVKLNCSV-EGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEIS 88 (182)
T ss_dssp EEEEEETTCCEEEEEEE-ESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEEC
T ss_pred cceEEeCCCcEEEEEEE-eCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEE
Confidence 45678899999999999 5788899999999887655544333332 257999999999999999999998664 45
Q ss_pred EEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCC-eEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeE
Q psy17058 264 MNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMP-TVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQ 342 (471)
Q Consensus 264 ~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 342 (471)
..+.|.|..+|.+...+. ...+.+|+.+.|.|.+.|.|.| .+.|++++..+..... ....|.|.++ +|+|.
T Consensus 89 ~~~~l~V~~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~-----~~~~L~i~~~--~d~G~ 160 (182)
T 1rhf_A 89 QPVWLTVEGVPFFTVEPK-DLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP-----SPSVLNVTGV--TQSTM 160 (182)
T ss_dssp CCEEEEEECSCEEEECCC-CEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE-----SSEEEEECCC--SSCEE
T ss_pred EEEEEEEecCCeEEecCc-ceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC-----CceEEEEecc--ccCeE
Confidence 678899999998877654 4688999999999999999999 9999999988753321 6678999988 58999
Q ss_pred EEEEEEcCCCceE-EEEEEEEe
Q psy17058 343 YKCIGKNSAGTEE-KVITVAVE 363 (471)
Q Consensus 343 Y~C~a~n~~g~~~-~~~~l~V~ 363 (471)
|+|.|.|..|... .++.|.|+
T Consensus 161 Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 161 FSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp EEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEECCCCCcccceEEEEeC
Confidence 9999999999885 47777763
No 119
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.90 E-value=7.6e-23 Score=176.24 Aligned_cols=180 Identities=19% Similarity=0.307 Sum_probs=140.5
Q ss_pred cCCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-------cCcEEEEcCCCCCCCeEEEEEE
Q psy17058 88 SPQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-------AGETLIINGITKADEGVYICSI 159 (471)
Q Consensus 88 ~~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~ 159 (471)
...+|.+...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.+
T Consensus 4 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (197)
T 3lcy_A 4 SGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRF-GKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIA 82 (197)
T ss_dssp CCEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEET-TEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEE
T ss_pred cCCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEEC-CEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEE
Confidence 346788999999999999999999999 7788889999999 544432221 2238999999999999999999
Q ss_pred EecCCceeeeeEEEEEeeccCCeeeec--CCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeee--
Q psy17058 160 QNAQGNVFQDYASIQVDKREMPRIRIH--PNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQEL-- 235 (471)
Q Consensus 160 ~~~~~~~~~~~~~l~v~~~~~p~~~~~--~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-- 235 (471)
.+..+. ......+.|. .+|..... ......+.+|+.+.|.|.+ .+.|.+.+.|++++..+....++.+....
T Consensus 83 ~n~~~~-~~~~~~l~v~--~~p~~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~ 158 (197)
T 3lcy_A 83 TNEVGE-VETSSKLLLQ--ATPQFHPGYPLKEKYYGAVGSTLRLHVMY-IGRPVPAMTWFHGQKLLQNSENITIENTEHY 158 (197)
T ss_dssp ECSSCE-EEEEEEEEEE--EEEEECTTSCCCSEEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSEEEEECSSE
T ss_pred ECCCCc-eeEEEEEEEE--cCCCCCCCccCCcceeecCCCeEEEEEEE-eeeeCCeeEEeECCEECCCCCceEEEEcCCE
Confidence 988776 5555555554 33433322 1234457799999999999 68899999999999876666665554432
Q ss_pred ceEEEeccCC-CCCeEEEEEEEcCCCceEEEEEEEEEe
Q psy17058 236 GVLRFNNIAT-GDEGKYTCIAENSAGKEVMNAYIHVLT 272 (471)
Q Consensus 236 ~~l~i~~~~~-~d~G~Y~C~~~~~~~~~~~~~~l~V~~ 272 (471)
..|.|.++.. +|.|.|+|.+.|..|.....+.|.|..
T Consensus 159 ~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 159 THLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 5799999985 899999999999999998888888864
No 120
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.90 E-value=2.5e-23 Score=188.14 Aligned_cols=263 Identities=13% Similarity=0.145 Sum_probs=107.9
Q ss_pred cEEEcCCceeecCCCcEEEEeeCCCCCC-eEEEEeCCCCCCC-CCcccCcEEEEcCCCCCCCeEEEEEEEecCCceeeee
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECKSNDPSA-TIKWSKDNQEQLP-PNMIAGETLIINGITKADEGVYICSIQNAQGNVFQDY 170 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~~~~p~~-~v~W~~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~ 170 (471)
++.+.|+...|.+|+++.|.|..+.+.+ .+.|.-....... ........|.|.+++.+ |.|.|.+.... ......
T Consensus 1 ~~~v~P~~~~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~--~~y~C~~~~~~-~~~~~~ 77 (291)
T 1mq8_A 1 QTSVSPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQED--SQPMCYSNCPD-GQSTAK 77 (291)
T ss_dssp CEEEECSEEEECTTCEEEEEEEECCSSCSEEEEECSSCCCCCCCSCSSEEEEEEESCCSC--CCCEEEEECSS-CEEEEE
T ss_pred CeEEeCCccEEcCCCeEEEEEeCCCCCCccceEEecCCCcccccCCCceEEEEEEecccC--CeEEEEEEcCC-ccEEEE
Confidence 3677888999999999999999333444 4888643122211 11112236899998854 46999997543 324444
Q ss_pred EEEEEeeccCCee-eecCCCceeEEcCCeEEEEEEccCCCCCC--eEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCC
Q psy17058 171 ASIQVDKREMPRI-RIHPNASQTFIVGDRADIQCVLEAGEPSP--TQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGD 247 (471)
Q Consensus 171 ~~l~v~~~~~p~~-~~~~~~~~~v~~g~~~~L~C~~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 247 (471)
+.+.|. .+|.. .+.+. ...+.+|+.++|.|.+.++.|.. +|+|+|++..+...... ......+|.+.....+|
T Consensus 78 v~l~V~--~~P~~v~I~~~-~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~-~~~~~~~l~~~~~~~D~ 153 (291)
T 1mq8_A 78 TFLTVY--WTPERVELAPL-PSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV-GEPAEVTTTVLVRRDHH 153 (291)
T ss_dssp CEEEEC--BCCSCCCBCCC-CSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC-BTTEEEEEECCCSSSCS
T ss_pred EEEEEe--cCCCCCEEecC-CccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC-CCCceEEEEeeeeeccC
Confidence 445554 44432 23322 23477899999999997777765 68999998764322211 11113456666666677
Q ss_pred CeEEEEEEEcCCCc--------eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCC---eEEEEeCCccCC
Q psy17058 248 EGKYTCIAENSAGK--------EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMP---TVSWVKYIAPFD 316 (471)
Q Consensus 248 ~G~Y~C~~~~~~~~--------~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~---~i~W~~~~~~~~ 316 (471)
.+.|+|+|.|..+. .+....|.|+++|...........+.+|+.++|.|.+.|+|++ .+.|+++|+.+.
T Consensus 154 g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~ 233 (291)
T 1mq8_A 154 GANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLN 233 (291)
T ss_dssp SCEEEEEEEEECGGGTSCEEEECCCCEECBC-------------------------------------------------
T ss_pred CceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecC
Confidence 77999999986442 2445688888876432221112267899999999999997554 599999998886
Q ss_pred CcccccccCceeEEEEeec---CC--CCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 317 RNLERDELTSRAVYTIASV---RE--SDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 317 ~~~~~~~~~~~~~l~i~~~---~~--~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
..... ....+++... .. ++.+.|+|.|.|.....+....|.|..-|
T Consensus 234 ~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~ 284 (291)
T 1mq8_A 234 PTVTY----GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP 284 (291)
T ss_dssp -------------------------------------------------------
T ss_pred ceeee----cCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCC
Confidence 43221 1223333332 23 34668889998865556667778877643
No 121
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.90 E-value=3.1e-22 Score=174.64 Aligned_cols=172 Identities=20% Similarity=0.261 Sum_probs=136.8
Q ss_pred EcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeec--eEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEE
Q psy17058 194 IVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELG--VLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVL 271 (471)
Q Consensus 194 ~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 271 (471)
..++.+.|.|.+....|.+.+.|++++..+....++.+...+. .|.|.+++.+|+|.|+|.+.|..+.....+.|.|.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 4678889999984445688999999998877666666554333 49999999999999999999988877766666554
Q ss_pred e--------------------CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccc---cCcee
Q psy17058 272 T--------------------LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDE---LTSRA 328 (471)
Q Consensus 272 ~--------------------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~---~~~~~ 328 (471)
. .|.+.........+.+|+.+.|.|.+.|+|.+.+.|++++..+........ .....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 174 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEE
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEE
Confidence 2 444544444556889999999999999999999999999988764322111 13456
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecC
Q psy17058 329 VYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 329 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 365 (471)
.|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 175 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 175 YFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 9999999999999999999999999999999988753
No 122
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.90 E-value=1.8e-22 Score=174.47 Aligned_cols=179 Identities=18% Similarity=0.236 Sum_probs=131.0
Q ss_pred ecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEE
Q psy17058 185 IHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVM 264 (471)
Q Consensus 185 ~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 264 (471)
+.+.....+.+|+.++|.|.+ .+.|.+.+.|++.... .+............|.|.+++.+|+|.|+|.+.|..+..+.
T Consensus 5 i~p~~~~~~~~G~~v~L~C~~-~g~P~p~i~W~~~~~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 5 TTPESRYLAQIGDSVSLTCST-TGCESPFFSWRTQIDS-PLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp EESSSEEEEETTSCEEEEEEE-ESCSSCEEEEEETTCC-CCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred ECCCCcEEEcCCCcEEEEEee-cCCCCCeEEEECCCCC-CccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 344444445699999999999 6788899999984322 22222222223457999999999999999999999887788
Q ss_pred EEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecC-C--CeEEEEeCCccCCCccccc------ccCceeEEEEeec
Q psy17058 265 NAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRP-M--PTVSWVKYIAPFDRNLERD------ELTSRAVYTIASV 335 (471)
Q Consensus 265 ~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p-~--~~i~W~~~~~~~~~~~~~~------~~~~~~~l~i~~~ 335 (471)
.+.|.|..+|........ ..+.+|+.++|.|.+.|.+ . ++|.|++++..+....... .......|.|...
T Consensus 83 ~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~ 161 (202)
T 1vca_A 83 GIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPV 161 (202)
T ss_dssp EEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCC
T ss_pred EEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEee
Confidence 889999887753322112 4578999999999999854 3 3799999998764321111 0223456778888
Q ss_pred CCCCCeEEEEEEEcCCCc-------eEEEEEEEEecCC
Q psy17058 336 RESDAGQYKCIGKNSAGT-------EEKVITVAVEHRP 366 (471)
Q Consensus 336 ~~~d~G~Y~C~a~n~~g~-------~~~~~~l~V~~~p 366 (471)
..+|.|.|+|+|.|..|. .+.++.|.|.++|
T Consensus 162 ~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P 199 (202)
T 1vca_A 162 IEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP 199 (202)
T ss_dssp GGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC
T ss_pred eccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCC
Confidence 889999999999998875 3567889998876
No 123
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.89 E-value=4.1e-22 Score=173.99 Aligned_cols=183 Identities=25% Similarity=0.455 Sum_probs=137.7
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc--------cCcEEEEcCC-CCCCCeEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI--------AGETLIINGI-TKADEGVYICS 158 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~--------~~~~L~i~~v-~~~D~G~Y~C~ 158 (471)
..+|.|...|.+..+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ....|.|.++ +.+|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 82 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKK-GKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECV 82 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEEC-CcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEE
Confidence 35788999999999999999999999 7788899999999 555443221 3457999999 59999999999
Q ss_pred EEecCCceeeeeEEEEEeec-----cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC---CCce
Q psy17058 159 IQNAQGNVFQDYASIQVDKR-----EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG---PDVE 230 (471)
Q Consensus 159 ~~~~~~~~~~~~~~l~v~~~-----~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~---~~~~ 230 (471)
+.|..+. ......|.|... ..|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+... .++.
T Consensus 83 a~n~~g~-~~~~~~l~V~~~~~~~~~~p~~~~~~-~~~~~~~g~~v~l~C~~-~g~p~p~v~W~~~g~~l~~~~~~~~~~ 159 (212)
T 2yd6_A 83 ASNNVGE-ISVSTRLTVLREDQIPRGFPTIDMGP-QLKVVERTRTATMLCAA-SGNPDPEITWFKDFLPVDTSNNNGRIK 159 (212)
T ss_dssp EEETTEE-EEEEEEEEEECGGGCCTTCCEEEECC-CCEEEETTSCEEEEEEE-ECSSCCEEEEEETTEEC------CCEE
T ss_pred EEcCCCc-EEEEEEEEEeccCccCCCcceeecCC-cceeEecCCCEEEEEEe-cCCCCCeEEEEECCccccCcCCCceEE
Confidence 9998876 555666666532 124454443 34567899999999999 78899999999998775443 2333
Q ss_pred EEe--eeceEEEeccCCCCCeEEEEEEEcCCCce-EEEEEEEEEeCCc
Q psy17058 231 VYQ--ELGVLRFNNIATGDEGKYTCIAENSAGKE-VMNAYIHVLTLPA 275 (471)
Q Consensus 231 ~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~ 275 (471)
... ..+.|.|.+++.+|.|.|+|.|.|..|.. +..+.|.|...+.
T Consensus 160 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~~ 207 (212)
T 2yd6_A 160 QLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTKH 207 (212)
T ss_dssp EEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred EEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEeccc
Confidence 222 14689999999999999999999998875 4457777776554
No 124
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.89 E-value=3.1e-22 Score=173.02 Aligned_cols=177 Identities=22% Similarity=0.335 Sum_probs=137.2
Q ss_pred eeecCCCceeEEcCCeEEEEEE-ccCCCCC-CeEEEEeCCCCCCc--CCCceEEeeeceEEEeccCCCCCeEEEEEEEcC
Q psy17058 183 IRIHPNASQTFIVGDRADIQCV-LEAGEPS-PTQTWIRPDNDGKF--GPDVEVYQELGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 183 ~~~~~~~~~~v~~g~~~~L~C~-~~~~~p~-~~v~W~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
+...+.....+.+|+.++|.|. + .+.|. +.+.|++++..+.. .........++.|.|.+++.+|+|.|+|.+.+.
T Consensus 10 ~~~~~~~~~~v~~G~~v~L~C~~~-~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~ 88 (201)
T 3s97_C 10 FPPEERPEVRVKEGKGMVLLCDPP-YHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP 88 (201)
T ss_dssp CCSSCCCCEEEETTCCEEECCCCC-SEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEG
T ss_pred cCcCCCceEEEECCCCEEEecccc-ccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEec
Confidence 3344455678899999999999 6 67788 99999999987643 233333344678999999999999999999986
Q ss_pred CCceEE---EEEEEEE-------eCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCcee
Q psy17058 259 AGKEVM---NAYIHVL-------TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRA 328 (471)
Q Consensus 259 ~~~~~~---~~~l~V~-------~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 328 (471)
.+.... .+.+.+. .+|.+...+. ...+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~--~~~~~~ 165 (201)
T 3s97_C 89 SITKSVFSKFIPLIPIPERTTKPYPADIVVQFK-DVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAE--ISTSGA 165 (201)
T ss_dssp GGTEEEECCCEEEEEECCSSCCCEEEEEEEECC-CEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCE--EETTTT
T ss_pred CCCcchhhcccceeeccccccCCCCCceEecCC-ceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCcee--ecCCCC
Confidence 654432 2333333 2344544443 56788999999999999999999999999987764422 233457
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 329 VYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 329 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
.|.|.++..+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 166 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 166 VLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 89999999999999999999999999999999886
No 125
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.89 E-value=1.3e-21 Score=167.60 Aligned_cols=173 Identities=22% Similarity=0.318 Sum_probs=131.9
Q ss_pred CCcEEEcCCceeecC-CCcEEEEee-CCCCC--CeEEEEeCCCCCCCCCcc--cCcEEEEcCCCCCCCeEEEEEEEecCC
Q psy17058 91 ANEVQVTPRQQSAPE-GSQVTIECK-SNDPS--ATIKWSKDNQEQLPPNMI--AGETLIINGITKADEGVYICSIQNAQG 164 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~-G~~v~l~C~-~~~p~--~~v~W~~~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~~~~~~~ 164 (471)
+|.|... ....+.+ |+++.|.|. .+.+. +.+.|+++ +..+..... .+..|.|.+++.+|+|.|+|.+.|. +
T Consensus 3 ~P~i~~~-~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~-~ 79 (190)
T 2wv3_A 3 EPRIVTS-EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKN-GVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFV-S 79 (190)
T ss_dssp CCEEEEC-CCEECCCSSSCEEEEEEEEECSSCEEEEEEEET-TEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEET-T
T ss_pred CCccccc-ceEEEccCCceEEEEEEeccCCCCceEEEEEEC-CEECcccceEeccEEEEEecCCcccCEEEEEEEEeC-C
Confidence 5667664 4566777 999999999 66665 78999999 555543322 5678999999999999999999998 5
Q ss_pred ceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEe--CCCCCC---cCCCceEEeee--ce
Q psy17058 165 NVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIR--PDNDGK---FGPDVEVYQEL--GV 237 (471)
Q Consensus 165 ~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~--~~~~~~---~~~~~~~~~~~--~~ 237 (471)
. ......|.|. .+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++ ++..+. ...++.+.... +.
T Consensus 80 ~-~~~~~~l~V~--~~p~~~~~~-~~~~~~~g~~v~l~C~~-~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 154 (190)
T 2wv3_A 80 A-PKANATIEVK--AAPDITGHK-RSENKNEGQDAMMYCKS-VGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTE 154 (190)
T ss_dssp E-EEEEEEEEEE--CCCEEEEEC-SEEEEETTSCEEEEEEE-ECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEE
T ss_pred c-ccccEEEEEe--cCCcccccC-CcceeeCCCcEEEEEEe-CccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeE
Confidence 4 5555555554 567766554 34568899999999999 788999999999 444322 23344443322 37
Q ss_pred EEEeccC-CCCCeEEEEEEEcCCCceEEEEEEEEE
Q psy17058 238 LRFNNIA-TGDEGKYTCIAENSAGKEVMNAYIHVL 271 (471)
Q Consensus 238 l~i~~~~-~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 271 (471)
|.|.+++ .+|.|.|+|.+.|..|....++.|.|.
T Consensus 155 L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 155 LNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 9999999 799999999999999998888888775
No 126
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.89 E-value=2.7e-22 Score=177.43 Aligned_cols=177 Identities=20% Similarity=0.356 Sum_probs=140.6
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCc---eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDV---EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMN 265 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~---~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 265 (471)
....+.+|+.++|.|.+ .+.|.+.+.|++++..+...... ........|.|.+++.+|+|.|+|.+.|..+.....
T Consensus 27 ~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 105 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPA-GGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHT 105 (231)
T ss_dssp SCEEEETTSCEEEECCE-EEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred eeEEEccCCCEEEEEec-ccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCccccc
Confidence 45678899999999999 67788899999998876544332 333445589999999999999999999998888888
Q ss_pred EEEEEEeCC----ceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEe----CCccCCCccc---------ccccCcee
Q psy17058 266 AYIHVLTLP----AVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVK----YIAPFDRNLE---------RDELTSRA 328 (471)
Q Consensus 266 ~~l~V~~~p----~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~----~~~~~~~~~~---------~~~~~~~~ 328 (471)
+.|.|...+ .+.........+.+|+.+.|.|.+.++|.+.+.|++ ++..+..... .......+
T Consensus 106 ~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (231)
T 3ojm_B 106 YHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAE 185 (231)
T ss_dssp EEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTT
T ss_pred EEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCcc
Confidence 888888632 222223345688899999999999999999999999 6665532211 01223446
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 329 VYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 329 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
+|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|
T Consensus 186 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 223 (231)
T 3ojm_B 186 VLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQ 223 (231)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred EEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCC
Confidence 79999999999999999999999999999999999876
No 127
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.89 E-value=3.1e-22 Score=174.86 Aligned_cols=179 Identities=15% Similarity=0.229 Sum_probs=127.2
Q ss_pred cCCceeecCC--CcEEEEeeCCCCCCeEEEEeC--CCCCCCCCcc----cCcEEEEcCCCCCCCeEEEEEEEecCCceee
Q psy17058 97 TPRQQSAPEG--SQVTIECKSNDPSATIKWSKD--NQEQLPPNMI----AGETLIINGITKADEGVYICSIQNAQGNVFQ 168 (471)
Q Consensus 97 ~p~~~~v~~G--~~v~l~C~~~~p~~~v~W~~~--~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~ 168 (471)
.|..+.+.+| ++++|.|....|.+.+.|++. ++..+..... ....|.|.+++.+|+|.|+|.|.|..+...+
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s 92 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQS 92 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSSTTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEEC
T ss_pred CceEEEEecCCCccEEEeeccCCCCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEE
Confidence 4568889999 999999993347789999885 3555443322 4568999999999999999999885444233
Q ss_pred eeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCC--CCCeEEEEeCCCCCCcCCC-c-eE--------Eeeec
Q psy17058 169 DYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGE--PSPTQTWIRPDNDGKFGPD-V-EV--------YQELG 236 (471)
Q Consensus 169 ~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~--p~~~v~W~~~~~~~~~~~~-~-~~--------~~~~~ 236 (471)
....|.|....+|.+.+.+.....+.+|+.++|.|.+ .+. +.+.+.|++++..+..... . .. ....+
T Consensus 93 ~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~-~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
T 2x1w_L 93 IMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTA-RTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLS 171 (213)
T ss_dssp CCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEE-EECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEE
T ss_pred EEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEE-ECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeE
Confidence 3355555433345566666665578999999999999 443 3458999999886432111 0 00 12245
Q ss_pred eEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCce
Q psy17058 237 VLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAV 276 (471)
Q Consensus 237 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~ 276 (471)
.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|.+
T Consensus 172 ~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 172 TLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211 (213)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----
T ss_pred EEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccccc
Confidence 7999999999999999999999999999999999987765
No 128
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.89 E-value=8.6e-22 Score=170.51 Aligned_cols=176 Identities=16% Similarity=0.251 Sum_probs=131.0
Q ss_pred CCCceeEEcCCeEEEEEEccCCCCC-----CeEEEEe-CCCCCCcCCCceEEe-----eeceEEEeccCCCCCeEEEEEE
Q psy17058 187 PNASQTFIVGDRADIQCVLEAGEPS-----PTQTWIR-PDNDGKFGPDVEVYQ-----ELGVLRFNNIATGDEGKYTCIA 255 (471)
Q Consensus 187 ~~~~~~v~~g~~~~L~C~~~~~~p~-----~~v~W~~-~~~~~~~~~~~~~~~-----~~~~l~i~~~~~~d~G~Y~C~~ 255 (471)
+.....+.+|+.++|.|.+ .+.|. +.+.|+| ++.......+..+.. ....|.|.+++.+|+|.|+|.+
T Consensus 8 p~~~v~v~~G~~v~L~C~~-~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 86 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDF-DRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLV 86 (202)
T ss_dssp SCSEEEEETTSCEEEEEEE-CTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEe-cCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEE
Confidence 3345678899999999999 66665 7899999 444433444444433 2367999999999999999999
Q ss_pred EcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeec
Q psy17058 256 ENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASV 335 (471)
Q Consensus 256 ~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~ 335 (471)
.|..+.....+.|.|..++..... ....+.+|+.+.|.|.+.|+|.|.+.|++++..+..............+.|..+
T Consensus 87 ~~~~~~~~~~~~l~V~~~~~~p~~--~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v 164 (202)
T 3bp6_B 87 ICGAAWDYKYLTVKVKASYMRIDT--RILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRL 164 (202)
T ss_dssp EETTEEEEEEEEEEEEBCCCCEEE--EEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEE
T ss_pred EeCCCcceEEEEEEecCCCCcccE--EEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEE
Confidence 998887788888888875432211 012567899999999999999999999998876543322222333466778899
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEEecC
Q psy17058 336 RESDAGQYKCIGKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 336 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 365 (471)
..+|.|.|+|.|.|..|.....+.|.|...
T Consensus 165 ~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 165 KPQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp CCCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred EcCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 999999999999999999999988888654
No 129
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.89 E-value=6.8e-22 Score=169.46 Aligned_cols=172 Identities=18% Similarity=0.315 Sum_probs=133.4
Q ss_pred CceeEEcCCeEEEEEEccCCCC-CCeEEEEe-CCCCCCc-CCCceEEe---eeceEEEeccCCCCCeEEEEEEEcCC-Cc
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP-SPTQTWIR-PDNDGKF-GPDVEVYQ---ELGVLRFNNIATGDEGKYTCIAENSA-GK 261 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~-~~~~~~~-~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~ 261 (471)
....+.+|+.++|.|.+ .+.+ .+.+.|++ ++..+.. ..++.+.. ....|.|.+++.+|+|.|+|.+.+.. +.
T Consensus 10 ~~~~v~~G~~v~l~C~~-~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 88 (191)
T 1epf_A 10 SQGEISVGESKFFLCQV-AGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQ 88 (191)
T ss_dssp SSEEEETTCCEEEEEEE-CCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEE
T ss_pred CCcEEcCCCCEEEEEEC-CCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcc
Confidence 35578899999999999 5554 78999999 6665442 23333322 24689999999999999999999987 45
Q ss_pred eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc-cccccCceeEEEEeecCCCCC
Q psy17058 262 EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL-ERDELTSRAVYTIASVRESDA 340 (471)
Q Consensus 262 ~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~ 340 (471)
.+..+.|.|..+|.+...+. ...+.+|+.+.|.|.+.|+|.+.+.|++++..+.... .......++.|.|.+++.+|+
T Consensus 89 ~~~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 167 (191)
T 1epf_A 89 SEATVNVKIFQKLMFKNAPT-PQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDE 167 (191)
T ss_dssp EEEEEEEEEECCSEEEECCS-SEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGC
T ss_pred eEEEEEEEeecCceEecCCC-cEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChhhC
Confidence 67778888888888776653 4678999999999999999999999999998775321 111223345799999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEE
Q psy17058 341 GQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 341 G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
|.|+|.|.|..+.......+.|
T Consensus 168 G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 168 GTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEE
T ss_pred EEEEEEEEEecceeEEEEEEEE
Confidence 9999999999876655555544
No 130
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.89 E-value=2.5e-22 Score=173.97 Aligned_cols=169 Identities=17% Similarity=0.253 Sum_probs=128.3
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCe-EEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCce
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSAT-IKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNV 166 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~-v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 166 (471)
...|.+.+.|....+.+|++++|.|. .+.|.+. +.|+++ +..+... ...|.|.+++.+|+|.|+|.+.|..
T Consensus 5 ~p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~-g~~l~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~--- 77 (204)
T 3sgj_C 5 LPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHN-ESLISSQ---ASSYFIDAATVDDSGEYRCQTQLST--- 77 (204)
T ss_dssp -CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEET-TEEESCC---SSEEEESSCCGGGCEEEEEEETTSB---
T ss_pred CCCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEEC-CEEcccC---ccEEEEecccccCCEEEEEEeCCCc---
Confidence 45688999998889999999999999 6666654 999999 5555432 3799999999999999999998743
Q ss_pred eeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCC
Q psy17058 167 FQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATG 246 (471)
Q Consensus 167 ~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 246 (471)
.+....|.|. .+|.+...+. ..+.+|+.++|.|.+..+.|.+.+.|++++..+. .....+.|.|.+++.+
T Consensus 78 ~s~~~~l~V~--~~p~~~~~~~--~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~------~~~~~~~L~i~~v~~~ 147 (204)
T 3sgj_C 78 LSDPVQLEVH--IGWLLLQAPR--WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRK------YFHHNSDFYIPKATLK 147 (204)
T ss_dssp CCCCEEEEEE--CSSEEEECSC--SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEE------EEEECCCEEESSCCGG
T ss_pred ccccEEEEEe--cCceEecCCc--eeEeCCCcEEEEEEecCCCCCceEEEEECCcEee------cccCCceEEECcCCcc
Confidence 3334455554 5555544433 4688999999999995555778999999987622 2333678999999999
Q ss_pred CCeEEEEEEEcC-CCceEEEEEEEEEeCC
Q psy17058 247 DEGKYTCIAENS-AGKEVMNAYIHVLTLP 274 (471)
Q Consensus 247 d~G~Y~C~~~~~-~~~~~~~~~l~V~~~p 274 (471)
|+|.|+|.+.|. .+..+..+.|.|..+|
T Consensus 148 D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~ 176 (204)
T 3sgj_C 148 DSGSYFCRGLVGSKNVSSETVQITITQGL 176 (204)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred cCEEEEEEEEeCCCceecCcEEEEEeCcC
Confidence 999999999994 3345666778887654
No 131
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.89 E-value=1.5e-21 Score=167.08 Aligned_cols=173 Identities=21% Similarity=0.386 Sum_probs=129.7
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-------cCcEEEEcCCCCCCCeEEEEEEEecC
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-------AGETLIINGITKADEGVYICSIQNAQ 163 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~~~~~ 163 (471)
..+.+.|.+..+.+|+++.|.|. .+.|. .+.|+++++..+..... ....|.|.+++.+|+|.|+|.+.+..
T Consensus 3 l~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (189)
T 2v44_A 3 LQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAK 81 (189)
T ss_dssp EEEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTT
T ss_pred eEEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCC
Confidence 35777888999999999999999 66666 99999954666543322 23589999999999999999999987
Q ss_pred CceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc--CCCceEEeeeceEEEe
Q psy17058 164 GNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF--GPDVEVYQELGVLRFN 241 (471)
Q Consensus 164 ~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~--~~~~~~~~~~~~l~i~ 241 (471)
+..... .+.+.+..+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+.. ..++.... ++.|.|.
T Consensus 82 g~~~~~--~~~l~v~~~p~~~~~~-~~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~ 156 (189)
T 2v44_A 82 GQTQEA--TVVLEIYQKLTFREVV-SPQEFKQGEDAEVVCRV-SSSPAPAVSWLYHNEEVTTISDNRFAMLA-NNNLQIL 156 (189)
T ss_dssp SCEEEE--EEEEEEECCCEEESCC-CSEEEETTSCEEECCEE-ECSSCCEEEEEEEC--CEECCCTTEEECT-TSCEEET
T ss_pred CCcEEE--EEEEEEecCCceeecC-CcEEEeCCCCEEEEEEE-CcCCCCcEEEEECCcEEeccCCCCEEEec-CCcEEEE
Confidence 763333 4444444566655443 34578899999999999 6889999999999987643 23333333 5689999
Q ss_pred ccCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 242 NIATGDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 242 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
+++.+|+|.|+|.+.|..+.......+.|
T Consensus 157 ~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 157 NINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp TCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 99999999999999999876554444443
No 132
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.89 E-value=1.2e-21 Score=168.55 Aligned_cols=171 Identities=18% Similarity=0.336 Sum_probs=134.8
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-C-CCCCCeEEEEeCCCCCCCCCcc--------c--------CcEEEEcCCCCCC
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-S-NDPSATIKWSKDNQEQLPPNMI--------A--------GETLIINGITKAD 151 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~-~~p~~~v~W~~~~~~~~~~~~~--------~--------~~~L~i~~v~~~D 151 (471)
.+|.|...|....+.+|+++.|.|. . +.|.+.+.|+++ +..+..... . .+.|.|.+++.+|
T Consensus 1 e~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 79 (195)
T 2c5d_C 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRD-GQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSD 79 (195)
T ss_dssp -CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEET-TEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTT
T ss_pred CCCeeccChhheEEecCCcEEEecccccCCCCcEEEEEEC-CEEcccCCCCceEEEEccccccceeeccEEEEEeccccC
Confidence 3688899999999999999999999 6 889999999998 555543310 1 4689999999999
Q ss_pred CeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCCCcCCCce
Q psy17058 152 EGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDGKFGPDVE 230 (471)
Q Consensus 152 ~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~~~~~~~~ 230 (471)
+|.|+|.+.+..+........|.| ..+|.+...+. ...+.+|+.++|.|.+ .+.|.+ .+.|++++..+......
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~l~V--~~~p~~~~~~~-~~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~~~~~~~~~~- 154 (195)
T 2c5d_C 80 TGQYQCLVFLGHQTFVSQPGYVGL--EGLPYFLEEPE-DRTVAANTPFNLSCQA-QGPPEPVDLLWLQDAVPLATAPGH- 154 (195)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE--CCSCEEEECCC-CEEECTTCCEEEEEEE-ECSSCCCEEEEEESSCBSSSSTTS-
T ss_pred CcEEEEEEEeCCCceecccEEEEE--ecCCeEEcCCC-cEEEcCCCEEEEEeEC-CCCCCCCEEEEEECCEeccCCCCc-
Confidence 999999999976652333345555 46677665544 4678899999999999 788888 99999999876544332
Q ss_pred EEeeeceEEEeccCCCCCeEEEEEEEcCCCceE-EEEEEEE
Q psy17058 231 VYQELGVLRFNNIATGDEGKYTCIAENSAGKEV-MNAYIHV 270 (471)
Q Consensus 231 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~V 270 (471)
...+.|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 155 --~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 155 --GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp --SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 336789999987 78999999999988774 6777777
No 133
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.89 E-value=2.7e-22 Score=175.21 Aligned_cols=174 Identities=18% Similarity=0.285 Sum_probs=133.5
Q ss_pred ceeEEcCCeEEEEEEccCCCC----CCeEEEEeCCCCC---------------------CcCCCceEEe-----eeceEE
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP----SPTQTWIRPDNDG---------------------KFGPDVEVYQ-----ELGVLR 239 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p----~~~v~W~~~~~~~---------------------~~~~~~~~~~-----~~~~l~ 239 (471)
...+.+|+.++|.|.+ .+.+ .+.+.|++++... ....+..+.. ....|.
T Consensus 9 ~v~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 9 RIEKAKGETAYLPCKF-TLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEETTSCEEECCBC-CCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred eEEEecCCCEEEEEEE-ecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 4567899999999999 5555 4699999854221 1122333322 246799
Q ss_pred EeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEE-eecCCCeEEEEeCCccCCCc
Q psy17058 240 FNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEA-TGRPMPTVSWVKYIAPFDRN 318 (471)
Q Consensus 240 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~i~W~~~~~~~~~~ 318 (471)
|.+++.+|+|.|+|.+.+..+.....+.|.|..+|.+...+. ...+.+|+.+.|.|.+ .|.|.+.+.|++++......
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~-~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~ 166 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFV-DGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMP 166 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEE-ESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCC
T ss_pred EccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeee-ecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccC
Confidence 999999999999999999988888889999998877654322 2247889999999999 88999999999965443322
Q ss_pred ccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecC
Q psy17058 319 LERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 319 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 365 (471)
...........|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 167 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 167 TPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp GGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred ccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 22223345569999999999999999999999999999999998754
No 134
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.89 E-value=4.8e-22 Score=173.37 Aligned_cols=174 Identities=20% Similarity=0.337 Sum_probs=136.1
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCC------------CcCCCceEEeeeceEEEeccCCCCCeEEEEEE
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDG------------KFGPDVEVYQELGVLRFNNIATGDEGKYTCIA 255 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 255 (471)
+....+.+|+.++|.|.+ .+.|.+.+.|++++..+ ....+..+ ....|.|.+++.+|+|.|+|.+
T Consensus 8 ~~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~L~i~~v~~~D~G~Y~C~~ 84 (212)
T 1f97_A 8 QSDVQVPENESIKLTCTY-SGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTF--SSSGITFSSVTRKDNGEYTCMV 84 (212)
T ss_dssp CSEEEEETTCCEEEECEE-ESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEE--ETTEEEESCCCGGGCEEEEEEE
T ss_pred CCCeEEEcCCCEEEEeEe-CCCCCcEEEEEECCCceeeEEecCCcccccccCcEEe--eceeEEEcccCcccCeEEEEEE
Confidence 445678899999999999 67788999999988762 11233332 2478999999999999999999
Q ss_pred EcCCC--ceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEE-EeecCCCeEEEEeCCc-cCCCccc---------cc
Q psy17058 256 ENSAG--KEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECE-ATGRPMPTVSWVKYIA-PFDRNLE---------RD 322 (471)
Q Consensus 256 ~~~~~--~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~-~~g~p~~~i~W~~~~~-~~~~~~~---------~~ 322 (471)
.+..+ ..+..+.|.|..+|.+...+. ...+.+|+.+.|.|. +.+.|.+.+.|++++. .+..... ..
T Consensus 85 ~~~~g~~~~~~~~~l~V~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~ 163 (212)
T 1f97_A 85 SEEGGQNYGEVSIHLTVLVPPSKPTISV-PSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFT 163 (212)
T ss_dssp EETTSSSEEEEEEEEEEEBCCCCCEEEC-CSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEE
T ss_pred EccCCCcccEEEEEEEEEcCCCCcccCC-ccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeE
Confidence 99866 456778889988887655433 246889999999999 7889999999999998 7653221 11
Q ss_pred ccCceeEEEEeecCCCCCeEEEEEEEcCCCce--EEEEEEEEecC
Q psy17058 323 ELTSRAVYTIASVRESDAGQYKCIGKNSAGTE--EKVITVAVEHR 365 (471)
Q Consensus 323 ~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~~ 365 (471)
.......|.|.++..+|+|.|+|.|.|..|.. +..+.|.|.+.
T Consensus 164 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~~ 208 (212)
T 1f97_A 164 IDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVEL 208 (212)
T ss_dssp ECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEESS
T ss_pred ecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEEe
Confidence 22346789999999999999999999999988 55677777764
No 135
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.88 E-value=3.2e-22 Score=174.50 Aligned_cols=189 Identities=24% Similarity=0.413 Sum_probs=135.8
Q ss_pred cCCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc---------cCcE-----EEEcCCCCCCC
Q psy17058 88 SPQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI---------AGET-----LIINGITKADE 152 (471)
Q Consensus 88 ~~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~---------~~~~-----L~i~~v~~~D~ 152 (471)
...+|.|...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+..... .++. |.|.+++.+|+
T Consensus 6 ~~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 84 (212)
T 2v9r_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKG-GERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDE 84 (212)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEET-TEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSC
T ss_pred ccCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEEC-CEEeeccccccccceEEecCCcEEEEEEEecCCCcccC
Confidence 345788999999999999999999999 7788889999999 444432110 2233 34456799999
Q ss_pred eEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEE
Q psy17058 153 GVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVY 232 (471)
Q Consensus 153 G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~ 232 (471)
|.|+|.+.|..+........+.|.... +.+.. ......+.+|+.++|.|.+..+.|.+.+.|++++..+........
T Consensus 85 G~Y~C~~~n~~g~~~~~~~~l~V~~~~-~~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~- 161 (212)
T 2v9r_A 85 GVYVCVARNYLGEAVSHDASLEVAILR-DDFRQ-NPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT- 161 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECEEC-SSCSB-CCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEE-
T ss_pred eEEEEEEECCCCceeecceEEEEEecc-cccee-CCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEE-
Confidence 999999999876533445566665432 22222 234557889999999999756788899999999887554433322
Q ss_pred eeeceEEEeccCCCCCeEEEEEEEcCCCceEE-EEEEEEEeCCceeeCC
Q psy17058 233 QELGVLRFNNIATGDEGKYTCIAENSAGKEVM-NAYIHVLTLPAVTITP 280 (471)
Q Consensus 233 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~V~~~p~~~~~~ 280 (471)
..++.|.|.+++.+|.|.|+|.+.|..|.... .+.|.|..+|.+...|
T Consensus 162 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~~P 210 (212)
T 2v9r_A 162 IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAA 210 (212)
T ss_dssp EETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--------
T ss_pred ccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhhhc
Confidence 33678999999999999999999999887554 4899999888776554
No 136
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.88 E-value=1.2e-21 Score=167.89 Aligned_cols=175 Identities=27% Similarity=0.409 Sum_probs=133.1
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCCC-CCeEEEEeCCCCCCCCCc---------ccCcEEEEcCCCCCCCeEEEEEE
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SNDP-SATIKWSKDNQEQLPPNM---------IAGETLIINGITKADEGVYICSI 159 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~p-~~~v~W~~~~~~~~~~~~---------~~~~~L~i~~v~~~D~G~Y~C~~ 159 (471)
++.|.+.|.+..+.+|+++.|.|. .+.+ .+.+.|++.++..+.... .....|.|.+++.+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 578889999999999999999999 6655 789999993365544211 13468999999999999999999
Q ss_pred EecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC--CceEEeeece
Q psy17058 160 QNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP--DVEVYQELGV 237 (471)
Q Consensus 160 ~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~ 237 (471)
.+..+. .....+.|.+..+|.+...+. ...+.+|+.++|.|.+ .+.|.+.+.|++++..+.... ++.... ++.
T Consensus 82 ~~~~~~--~~~~~~~l~v~~~p~~~~~~~-~~~~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~ 156 (191)
T 1epf_A 82 TAEDGT--QSEATVNVKIFQKLMFKNAPT-PQEFKEGEDAVIVCDV-VSSLPPTIIWKHKGRDVILKKDVRFIVLS-NNY 156 (191)
T ss_dssp EETTTE--EEEEEEEEEEECCSEEEECCS-SEECCTTSCEEECCEE-ECSSCCEEEEEETTEEGGGGCCTTEEECT-TSC
T ss_pred EcCCCc--ceEEEEEEEeecCceEecCCC-cEeecCCCeEEEEEEE-CCCCCCEEEEEECCEEeeccCCceEEEec-CCe
Confidence 998754 234455555556677665543 4567899999999999 688999999999988755433 233322 568
Q ss_pred EEEeccCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 238 LRFNNIATGDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 238 l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
|.|.+++.+|+|.|+|.|.|..+.......+.|
T Consensus 157 L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 157 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp EEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred EEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 999999999999999999998765554444444
No 137
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.88 E-value=4.7e-22 Score=173.68 Aligned_cols=175 Identities=17% Similarity=0.163 Sum_probs=126.0
Q ss_pred CceeEEcC--CeEEEEEEccCCCCCCeEEEEeC---CCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceE
Q psy17058 189 ASQTFIVG--DRADIQCVLEAGEPSPTQTWIRP---DNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEV 263 (471)
Q Consensus 189 ~~~~v~~g--~~~~L~C~~~~~~p~~~v~W~~~---~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 263 (471)
....+.+| +.++|.|.+ .+ |.+.++|+++ +..+........ .....|.|.+++.+|+|.|+|.+.|..+...
T Consensus 15 ~~v~v~eG~~~~v~L~C~~-~~-p~~~v~w~~~~~~g~~~~~~~~~~~-~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLG-SI-SNLNVSLCARYPEKRFVPDGNRISW-DSKKGFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp EEEEECCSTTCEEEECCCB-SS-TTCCEEEEEETTTEEECCCSSSCEE-ETTTEEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred eEEEEecCCCccEEEeecc-CC-CCcEEEEEhhcCCCccccCCCcccc-cCCccEEEccCChhcCceEEEEEEECCeeEE
Confidence 35567889 999999999 44 7789999885 433333322322 3356799999999999999999988544322
Q ss_pred -EEEEEEEEe--CCceeeCCCccEEecCCCcEEEEEEEeecCC--CeEEEEeCCccCCCccc---ccc-------cCcee
Q psy17058 264 -MNAYIHVLT--LPAVTITPSEYVSVRPGEPLTLECEATGRPM--PTVSWVKYIAPFDRNLE---RDE-------LTSRA 328 (471)
Q Consensus 264 -~~~~l~V~~--~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~i~W~~~~~~~~~~~~---~~~-------~~~~~ 328 (471)
..+.|.|.. +|.+.+.+...+.+.+|++++|.|.+.|.|. +.+.|++++..+..... ... ....+
T Consensus 92 s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (213)
T 2x1w_L 92 SIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLS 171 (213)
T ss_dssp CCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEE
T ss_pred EEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeE
Confidence 225666643 3445555555558899999999999998654 47999999887543211 000 23356
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 329 VYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 329 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|
T Consensus 172 ~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 172 TLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred EEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 79999999999999999999999999999999999876
No 138
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.88 E-value=1.2e-23 Score=198.15 Aligned_cols=202 Identities=16% Similarity=0.250 Sum_probs=156.1
Q ss_pred CCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCce
Q psy17058 151 DEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVE 230 (471)
Q Consensus 151 D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~ 230 (471)
|.|.|+|.+.+... .+.+....+|.+...+. ...+.+|+.++|.|.+ .+.|.+.+.|++++..+.......
T Consensus 136 ~~~~~~C~~~~~l~-------~l~~~~c~~P~i~~~~~-~~~v~~G~~v~L~C~~-~g~p~p~i~W~~~~~~~~~~~~~~ 206 (347)
T 2ifg_A 136 PEQKLQCHGQGPLA-------HMPNASCGVPTLKVQVP-NASVDVGDDVLLRCQV-EGRGLEQAGWILTELEQSATVMKS 206 (347)
T ss_dssp GGGCCCCSSSSCSS-------CCCCTTCCCCEEEEECC-SSCCBTTCCEEEEEEE-ECSSCCCCCEEESCCCSSEEECCC
T ss_pred cccCCCCCCChHHh-------cCCcccCCCCceeccCC-ceEEeCCCcEEEEEEE-ecCCCCEEEEEcCCceeecccccc
Confidence 57899998766221 12223345677666554 4578899999999999 788999999999987643322221
Q ss_pred EEeeeceEEEeccCCCCCe-EEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEE
Q psy17058 231 VYQELGVLRFNNIATGDEG-KYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWV 309 (471)
Q Consensus 231 ~~~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~ 309 (471)
.....+.|.|.+++..|+| .|+|.+.|..|..+..+.|.|..+|.+.. ..+.+|+.+.|.|.+.|.|.|.+.|+
T Consensus 207 ~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i~~-----~~~~~g~~v~l~C~~~g~P~p~i~W~ 281 (347)
T 2ifg_A 207 GGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQL-----HTAVEMHHWCIPFSVDGQPAPSLRWL 281 (347)
T ss_dssp CCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEEEE-----CCCEESSSEEEEEEEEEESCCEEEEE
T ss_pred eecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCeeee-----ccCccCceEEEEEEeeecCCCcEEEE
Confidence 2233668999999999999 99999999988888888888888777511 12457999999999999999999999
Q ss_pred eCCccCCCcccc---------cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 310 KYIAPFDRNLER---------DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 310 ~~~~~~~~~~~~---------~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
+++..+...... ......++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.++|
T Consensus 282 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 282 FNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp ETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred eCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 999887633211 112346789999999999999999999999999999999988764
No 139
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.88 E-value=4.7e-22 Score=172.43 Aligned_cols=165 Identities=13% Similarity=0.190 Sum_probs=123.3
Q ss_pred CceeecCCCcEEEEee--CCCCCCeEEEEeCCCCCCCCCcc---------cCcEEEEcCCCCCCCeEEEEEEEecCCcee
Q psy17058 99 RQQSAPEGSQVTIECK--SNDPSATIKWSKDNQEQLPPNMI---------AGETLIINGITKADEGVYICSIQNAQGNVF 167 (471)
Q Consensus 99 ~~~~v~~G~~v~l~C~--~~~p~~~v~W~~~~~~~~~~~~~---------~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~ 167 (471)
....+.+|+.+.|.|. .+.|.+.++|+++ +..+..... ....|.|.+++.+|+|.|+|.|.| +. .
T Consensus 10 ~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kn-g~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~-a 85 (207)
T 3rbs_A 10 LAVEILEKGQVRFWMQAEKLSGNAKVNYIFN-EKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GK-A 85 (207)
T ss_dssp EEEEECGGGCEEEEEECSCCCSCCEEEEEET-TEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TT-E
T ss_pred CceEEEeCCeEEEEEEEecCCCCCEEEEEEC-CEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CC-e
Confidence 3678999999999999 4579999999999 555533211 123699999999999999999999 33 2
Q ss_pred eeeEEEEEee-------------------ccCCeeeecCCCceeEEcCCeEEEEEEccCCC-CCCeEEEEeCCCCCCcCC
Q psy17058 168 QDYASIQVDK-------------------REMPRIRIHPNASQTFIVGDRADIQCVLEAGE-PSPTQTWIRPDNDGKFGP 227 (471)
Q Consensus 168 ~~~~~l~v~~-------------------~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~-p~~~v~W~~~~~~~~~~~ 227 (471)
.....+.+.. ..+|.+.... ...+.+|+.++|.|.+ .+. |.+.++|+|++..+....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~--~~~v~~g~~v~l~C~v-~g~~P~p~i~W~k~g~~l~~~~ 162 (207)
T 3rbs_A 86 TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL--SWEVTGECNVLLKCKV-ANIKKETHIVWYKDEREISVDE 162 (207)
T ss_dssp EEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE--EEEEETTTEEEEEEEE-ESCCTTCEEEEEETTEEECCCC
T ss_pred EEEEEEEEEccchhhhcccccccccccccCCCCceEecC--CcEEcCCCcEEEEEEE-eCCCCCCEEEEEECCEECCCCC
Confidence 2333332110 0144443332 3568899999999999 666 899999999998765555
Q ss_pred CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 228 DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 228 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
++........|.|.+++.+|+|.|+|.|.|..|....++.|.+
T Consensus 163 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 163 KHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp CCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred ceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 4443343457999999999999999999999999888877754
No 140
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.88 E-value=1.3e-21 Score=170.62 Aligned_cols=179 Identities=19% Similarity=0.367 Sum_probs=131.8
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCC---------C----CCCcc-cCcEEEEcCCCCCCCeEE
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQ---------L----PPNMI-AGETLIINGITKADEGVY 155 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~---------~----~~~~~-~~~~L~i~~v~~~D~G~Y 155 (471)
|..|...|..+.+.+|+++.|.|. .+.|.+.+.|++++... + ..+.. ....|.|.+++.+|+|.|
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y 80 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEY 80 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEE
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEE
Confidence 345677788899999999999999 77788999999994431 0 11111 457899999999999999
Q ss_pred EEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCC-CCCcCCC------
Q psy17058 156 ICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDN-DGKFGPD------ 228 (471)
Q Consensus 156 ~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~-~~~~~~~------ 228 (471)
+|.+.+..+. ......+.+.+..+|.+...+. ...+.+|+.++|.|.+..+.|.+.+.|++++. .+.....
T Consensus 81 ~C~~~~~~g~-~~~~~~~~l~V~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~ 158 (212)
T 1f97_A 81 TCMVSEEGGQ-NYGEVSIHLTVLVPPSKPTISV-PSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFM 158 (212)
T ss_dssp EEEEEETTSS-SEEEEEEEEEEEBCCCCCEEEC-CSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCS
T ss_pred EEEEEccCCC-cccEEEEEEEEEcCCCCcccCC-ccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccccccccccccc
Confidence 9999998663 3334445555445555443333 24678999999999943788999999999998 7554322
Q ss_pred ---ceEEeeeceEEEeccCCCCCeEEEEEEEcCCCce--EEEEEEEEE
Q psy17058 229 ---VEVYQELGVLRFNNIATGDEGKYTCIAENSAGKE--VMNAYIHVL 271 (471)
Q Consensus 229 ---~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~V~ 271 (471)
+......+.|.|.+++.+|.|.|+|.|.|..|.. +..+.|.|.
T Consensus 159 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 159 NSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp SSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred CceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 2222335689999999999999999999998887 445566665
No 141
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.88 E-value=2.6e-22 Score=175.07 Aligned_cols=184 Identities=32% Similarity=0.517 Sum_probs=133.6
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCC----ceEEeeece-----EEEeccCCCCCeE
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPD----VEVYQELGV-----LRFNNIATGDEGK 250 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~----~~~~~~~~~-----l~i~~~~~~d~G~ 250 (471)
+|.+... +....+.+|+.++|.|.+ .+.|.+.+.|++++..+..... .......+. |.|.+++..|+|.
T Consensus 9 pp~i~~~-p~~~~v~~G~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 86 (212)
T 2v9r_A 9 PPRIVEH-PSDLIVSKGEPATLNCKA-EGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (212)
T ss_dssp EEEEEEC-CCCEEECTTCCEEECCEE-EEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE
T ss_pred CcceecC-CCceEEeCCCcEEEEEEc-CCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE
Confidence 3444444 345678899999999999 6788889999999876543221 111112233 3445678999999
Q ss_pred EEEEEEcCCCce-EEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEE-eecCCCeEEEEeCCccCCCcccccccCcee
Q psy17058 251 YTCIAENSAGKE-VMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEA-TGRPMPTVSWVKYIAPFDRNLERDELTSRA 328 (471)
Q Consensus 251 Y~C~~~~~~~~~-~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 328 (471)
|+|.+.|..+.. +..+.|.|...+...........+.+|+.+.|.|.+ .+.|.+.+.|++++..+...... .....+
T Consensus 87 Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~-~~~~~~ 165 (212)
T 2v9r_A 87 YVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDER-ITIRGG 165 (212)
T ss_dssp EEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTT-EEEETT
T ss_pred EEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcce-EEccCC
Confidence 999999987654 445677776544333333345678899999999998 88999999999999887643221 122346
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCCceEEE-EEEEEecCC
Q psy17058 329 VYTIASVRESDAGQYKCIGKNSAGTEEKV-ITVAVEHRP 366 (471)
Q Consensus 329 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~p 366 (471)
.|.|.++..+|+|.|+|.|.|..|..... +.|.|..+|
T Consensus 166 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 166 KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERP 204 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCc
Confidence 89999999999999999999999987654 899998764
No 142
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.88 E-value=6.6e-22 Score=167.22 Aligned_cols=170 Identities=19% Similarity=0.228 Sum_probs=128.1
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCC-eEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCce
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSA-TIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNV 166 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~-~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 166 (471)
..+|.+.+.|....+.+|++++|.|. .+.+.+ .+.|+++ +..+.. ....|.|.+++.+|+|.|+|.+.+..+.
T Consensus 2 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~-~~~~~~---~~~~L~i~~v~~~d~G~Y~C~~~~~~~s- 76 (176)
T 1f2q_A 2 PQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHN-GSLSEE---TNSSLNIVNAKFEDSGEYKCQHQQVNES- 76 (176)
T ss_dssp --CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEET-TEECSC---CSSEEEECSCCGGGCEEEEEECTTSSCC-
T ss_pred CCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEEC-CeECCC---CceEEEEeccceecCEEEEEEcCCcccc-
Confidence 36788999999989999999999999 666654 6999999 555543 3679999999999999999999875543
Q ss_pred eeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCC
Q psy17058 167 FQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATG 246 (471)
Q Consensus 167 ~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 246 (471)
....+.|. .++.....+ ...+.+|+.++|.|.+..+.|.+.+.|++++..+... ..++.|.|.+++.+
T Consensus 77 --~~~~l~V~--~~~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~------~~~~~L~i~~v~~~ 144 (176)
T 1f2q_A 77 --EPVYLEVF--SDWLLLQAS--AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW------YENHNISITNATVE 144 (176)
T ss_dssp --CCEEEEEE--CSSEEEEES--CSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC------CCSSEEEESSCCGG
T ss_pred --ccEEEEEe--CcceeecCC--cceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee------cCCCeEEECCCCcc
Confidence 34455554 334333332 2467899999999999656777899999998764322 22578999999999
Q ss_pred CCeEEEEEEEcCCCc-eEEEEEEEEEeCCc
Q psy17058 247 DEGKYTCIAENSAGK-EVMNAYIHVLTLPA 275 (471)
Q Consensus 247 d~G~Y~C~~~~~~~~-~~~~~~l~V~~~p~ 275 (471)
|+|.|+|.+.|..+. .+..+.|.|..+|.
T Consensus 145 d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 145 DSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred cCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 999999999996443 45567888887764
No 143
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.88 E-value=4.8e-22 Score=172.14 Aligned_cols=168 Identities=14% Similarity=0.238 Sum_probs=129.5
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
..|.+.+.+.. ..+.+|+.++|.|.+ .+.|.+ .+.|++++..+... ...|.|.+++.+|+|.|+|.+.|
T Consensus 6 p~p~i~~~p~~-~~v~~G~~v~L~C~~-~~~p~~~~v~W~k~g~~l~~~--------~~~L~i~~v~~~D~G~Y~C~a~n 75 (204)
T 3sgj_C 6 PKAVVFLEPQW-YRVLEKDSVTLKCQG-AYSPEDQSTQWFHNESLISSQ--------ASSYFIDAATVDDSGEYRCQTQL 75 (204)
T ss_dssp CBCEEEEESCC-SEEETTCCEEEEEEC-CSSSSCCCEEEEETTEEESCC--------SSEEEESSCCGGGCEEEEEEETT
T ss_pred CCCeEEEcCCC-eEEECCCCEEEEEcC-CCCCCCcEEEEEECCEEcccC--------ccEEEEecccccCCEEEEEEeCC
Confidence 34556665543 578899999999999 566655 49999998763322 37899999999999999999987
Q ss_pred CCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeec-CCCeEEEEeCCccCCCcccccccCceeEEEEeecC
Q psy17058 258 SAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGR-PMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVR 336 (471)
Q Consensus 258 ~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 336 (471)
. ..+..+.|.|...|.+...+. ..+.+|+++.|.|.+.+. |.+.+.|++++..+.. ......|.|.+++
T Consensus 76 ~--~~s~~~~l~V~~~p~~~~~~~--~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~------~~~~~~L~i~~v~ 145 (204)
T 3sgj_C 76 S--TLSDPVQLEVHIGWLLLQAPR--WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY------FHHNSDFYIPKAT 145 (204)
T ss_dssp S--BCCCCEEEEEECSSEEEECSC--SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE------EEECCCEEESSCC
T ss_pred C--cccccEEEEEecCceEecCCc--eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec------ccCCceEEECcCC
Confidence 4 445567788887776655543 577899999999999765 5578999999887532 2235689999999
Q ss_pred CCCCeEEEEEEEcC-CCceEEEEEEEEecCC
Q psy17058 337 ESDAGQYKCIGKNS-AGTEEKVITVAVEHRP 366 (471)
Q Consensus 337 ~~d~G~Y~C~a~n~-~g~~~~~~~l~V~~~p 366 (471)
.+|+|.|+|.|.|. .+..+..+.|.|..++
T Consensus 146 ~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~ 176 (204)
T 3sgj_C 146 LKDSGSYFCRGLVGSKNVSSETVQITITQGL 176 (204)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred cccCEEEEEEEEeCCCceecCcEEEEEeCcC
Confidence 99999999999994 4555677889998765
No 144
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.88 E-value=2.1e-21 Score=166.45 Aligned_cols=173 Identities=24% Similarity=0.471 Sum_probs=131.3
Q ss_pred CCcEEEcCC--ceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-----cCcEEEEcCCCCCCCeEEEEEEEec
Q psy17058 91 ANEVQVTPR--QQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-----AGETLIINGITKADEGVYICSIQNA 162 (471)
Q Consensus 91 ~~~v~~~p~--~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~~~~~ 162 (471)
||.+.+.+. .+.+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.+.+.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRN-GKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEET-TEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEEC-CeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEcc
Confidence 677777644 578999999999999 7788899999999 555543322 4568999999999999999999998
Q ss_pred CCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC-------CCceEEe--
Q psy17058 163 QGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG-------PDVEVYQ-- 233 (471)
Q Consensus 163 ~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~-------~~~~~~~-- 233 (471)
.+. ......|.| ..+|.+...+ ...+.+|+.++|.|.+ .+.|.+.+.|++++....+. .++.+..
T Consensus 81 ~~~-~~~~~~l~V--~~~p~~~~~~--~~~~~~g~~v~l~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (192)
T 2va4_A 81 AGE-DEKQAFLQV--FVQPHIIQLK--NETTYENGQVTLVCDA-EGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH 154 (192)
T ss_dssp TEE-EEEEEEEEE--EEEEEEEEEC--CEEECTTSEEEEEEEE-EEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEET
T ss_pred ccc-cceEEEEEE--EccCcccccC--cceEEeCCeEEEEEEe-cCCCCCcEEEEeCCCCceeeccccccCCcEEEeecc
Confidence 766 444444554 3455554432 3456789999999999 77889999999985432221 2222222
Q ss_pred eeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 234 ELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 234 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
....|.|.++..+|.|.|+|.|.|..|....++.|.|
T Consensus 155 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 155 GSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 1357999999999999999999999999888888876
No 145
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.87 E-value=4.6e-21 Score=170.76 Aligned_cols=178 Identities=21% Similarity=0.400 Sum_probs=132.0
Q ss_pred CCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc--------cCcEEEEcCCCCCCCeEEEEEEEecCCceee
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI--------AGETLIINGITKADEGVYICSIQNAQGNVFQ 168 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~--------~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~ 168 (471)
+....+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.+.+..+. ..
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~-~~ 99 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKN-GREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGS-IR 99 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEET-TEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEE-EE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEEC-CcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCc-eE
Confidence 34678999999999999 7788899999999 554432211 4568999999999999999999998776 55
Q ss_pred eeEEEEEeec--cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEe----CCCCCCcCCCceEE----------
Q psy17058 169 DYASIQVDKR--EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIR----PDNDGKFGPDVEVY---------- 232 (471)
Q Consensus 169 ~~~~l~v~~~--~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~----~~~~~~~~~~~~~~---------- 232 (471)
....+.|... ..|.+.........+.+|+.++|.|.+ .+.|.+.+.|++ ++..+.........
T Consensus 100 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~-~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (241)
T 3grw_A 100 QTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKV-YSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESV 178 (241)
T ss_dssp EEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEE-ECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBS
T ss_pred EEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEE-ecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeec
Confidence 5566666532 234444444556677899999999999 788889999999 77665443322111
Q ss_pred eeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceee
Q psy17058 233 QELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTI 278 (471)
Q Consensus 233 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~ 278 (471)
.....|.|.++..+|.|.|+|.+.|..|..+..+.|.|..+|....
T Consensus 179 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~ 224 (241)
T 3grw_A 179 EADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEE 224 (241)
T ss_dssp EEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC--------
T ss_pred CCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCc
Confidence 1245799999999999999999999999999999999988776543
No 146
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.87 E-value=1.3e-21 Score=169.19 Aligned_cols=178 Identities=16% Similarity=0.265 Sum_probs=125.2
Q ss_pred cEEEcCCceee-cCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc---cCcEEEEcCCCCCCCeEEEEEEEecCCcee
Q psy17058 93 EVQVTPRQQSA-PEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI---AGETLIINGITKADEGVYICSIQNAQGNVF 167 (471)
Q Consensus 93 ~v~~~p~~~~v-~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~ 167 (471)
.+.+.|.+..+ .+|+++.|.|. .+.|.+.+.|++..+..+..... ....|.|.+++.+|+|.|+|.|.|..+. .
T Consensus 2 ~v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~-~ 80 (202)
T 1vca_A 2 KIETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRK-L 80 (202)
T ss_dssp EEEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEE-E
T ss_pred eEEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCce-E
Confidence 45667766555 49999999999 77899999999963443332222 3457999999999999999999998765 4
Q ss_pred eeeEEEEEeeccCCe-eeecCCCceeEEcCCeEEEEEEccCCCCC--CeEEEEeCCCCCCcCCCce------EEeeeceE
Q psy17058 168 QDYASIQVDKREMPR-IRIHPNASQTFIVGDRADIQCVLEAGEPS--PTQTWIRPDNDGKFGPDVE------VYQELGVL 238 (471)
Q Consensus 168 ~~~~~l~v~~~~~p~-~~~~~~~~~~v~~g~~~~L~C~~~~~~p~--~~v~W~~~~~~~~~~~~~~------~~~~~~~l 238 (471)
+..+.|.|. .+|. +.+.+. ..+.+|+.++|.|.+..+.|. +.++|+|++..+....... .......|
T Consensus 81 ~~~~~l~V~--~~p~~~~~~~~--~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l 156 (202)
T 1vca_A 81 EKGIQVEIY--SFPKDPEIHLS--GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEV 156 (202)
T ss_dssp EEEEEEEEE--BCCSCCEEEES--SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEE
T ss_pred eeEEEEEEE--eCCCCCEeCCc--eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEE
Confidence 445555554 3333 233332 468899999999999544454 4799999987543211100 11223456
Q ss_pred EEeccCCCCCeEEEEEEEcCCCc-------eEEEEEEEEEeCCc
Q psy17058 239 RFNNIATGDEGKYTCIAENSAGK-------EVMNAYIHVLTLPA 275 (471)
Q Consensus 239 ~i~~~~~~d~G~Y~C~~~~~~~~-------~~~~~~l~V~~~p~ 275 (471)
.|.....+|.|.|+|+|.|..+. .+.++.|.|.++|.
T Consensus 157 ~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 157 TFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp EECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred EEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 78888888999999999997664 45678899988875
No 147
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.87 E-value=2.8e-21 Score=169.42 Aligned_cols=170 Identities=23% Similarity=0.477 Sum_probs=135.6
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCC
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSA 259 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 259 (471)
.+.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+... ....|.|.+++..|+|.|+|.+.|..
T Consensus 18 ~~~i~~~p-~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~~~n~~ 88 (218)
T 3k0w_A 18 GSKITVNP-ESKAVLAGQFVKLCCRA-TGHPFVQYQWFKMNKEIPNG-------NTSELIFNAVHVKDAGFYVCRVNNNF 88 (218)
T ss_dssp -CCEEECC-CCEEEETTSBEEEECEE-TTTTSSEEEEEETTEECTTC-------CSSEEEETTCCGGGCEEEEEEEECTT
T ss_pred CCEEEECC-CCeEEeCCCcEEEEeee-cCCCCCEEEEEECCEECCCC-------CCCEEEEccCChhhCeEeEEEEEcCC
Confidence 34455544 45678899999999999 78888999999998764432 25679999999999999999999987
Q ss_pred Cce-EEEEEEEEEeC---------------CceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccc
Q psy17058 260 GKE-VMNAYIHVLTL---------------PAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDE 323 (471)
Q Consensus 260 ~~~-~~~~~l~V~~~---------------p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~ 323 (471)
+.. +..+.|.|... |.+...+ ....+.+|+.+.|.|.+.|+|.+.+.|++++..+...
T Consensus 89 ~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~----- 162 (218)
T 3k0w_A 89 TFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEP-TSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE----- 162 (218)
T ss_dssp CCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECC-CCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC-----
T ss_pred CCceeeEEEEEEEccCcccccccccccCCCceEEECC-CceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC-----
Confidence 654 55577888765 3444443 3467889999999999999999999999998876432
Q ss_pred cCceeEEEEeecCCCCCeEEEEEEEcCCCc-eEEEEEEEEecCC
Q psy17058 324 LTSRAVYTIASVRESDAGQYKCIGKNSAGT-EEKVITVAVEHRP 366 (471)
Q Consensus 324 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~p 366 (471)
....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|...+
T Consensus 163 --~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~ 204 (218)
T 3k0w_A 163 --TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELN 204 (218)
T ss_dssp --CSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC--
T ss_pred --CCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCc
Confidence 3468999999999999999999999887 4667888887754
No 148
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.87 E-value=2.8e-21 Score=168.04 Aligned_cols=177 Identities=17% Similarity=0.273 Sum_probs=130.1
Q ss_pred EEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCC--------------------CCCcc--cCcEEEEcCCCCC
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQL--------------------PPNMI--AGETLIINGITKA 150 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~--------------------~~~~~--~~~~L~i~~v~~~ 150 (471)
+.+.|.+..+.+|++++|.|. .+.+.+.+.|++++.... ..+.. .++.|.|.+++.+
T Consensus 2 ~~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~ 81 (208)
T 3r4d_A 2 VTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMK 81 (208)
T ss_dssp CEEEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGG
T ss_pred ccccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEcccccc
Confidence 456666788999999999999 777888999998732111 01111 3458999999999
Q ss_pred CCeEEEEEEEecCCceeeeeEEEEEeecc-CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCc
Q psy17058 151 DEGVYICSIQNAQGNVFQDYASIQVDKRE-MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDV 229 (471)
Q Consensus 151 D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~-~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~ 229 (471)
|+|.|+|.+.+..+........|.|.... .|.+..... . +.+|+.++|.|.+ .+.| +.+.|++++..+....++
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~--~-~~~g~~v~l~C~~-~~~p-p~i~W~~~g~~l~~~~~~ 156 (208)
T 3r4d_A 82 DMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNT--T-VKELDSVTLTCLS-NDIG-ANIQWLFNSQSLQLTERM 156 (208)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCS--S-CCTTCCEEEEEEC-SCTT-CEEEEEETTEECCCCSSE
T ss_pred CCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCc--e-EeeCCCEEEEEEC-CCCC-CceEEEECCEeCCCCCCe
Confidence 99999999998864435555556665322 244433322 2 7789999999999 5555 799999999887766777
Q ss_pred eEEeeeceEEEeccCCCCCeEEEEEEEcCCCce-EEEEEEEEEeCCc
Q psy17058 230 EVYQELGVLRFNNIATGDEGKYTCIAENSAGKE-VMNAYIHVLTLPA 275 (471)
Q Consensus 230 ~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~ 275 (471)
.+...++.|.|.++..+|.|.|+|.+.|..|.. +..+.|.|..++.
T Consensus 157 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 157 TLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp EEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC----
T ss_pred EEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 666656889999999999999999999998874 4557777765553
No 149
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.87 E-value=2.5e-21 Score=164.92 Aligned_cols=160 Identities=16% Similarity=0.216 Sum_probs=120.9
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCc-e
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGN-V 166 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~-~ 166 (471)
..+|.|.+.|.. .+.+|++++|.|. .+ +.+.+.|+|+ +.. .......|.|.+++.+|+|.|+|.+.|..+. .
T Consensus 6 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~-g~~---~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 79 (184)
T 2gi7_A 6 LPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKL-SSS---RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSL 79 (184)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEET-TTC---CEESSSEEEESSCCGGGCEEEEEEEEETTEEBC
T ss_pred CCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEEC-Ccc---ccCcccEEEECcCChhhCceEEEEEEcCCCccC
Confidence 467888888875 8999999999999 54 7789999999 443 2235779999999999999999999987642 1
Q ss_pred eeeeEEEEEee-ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCC
Q psy17058 167 FQDYASIQVDK-REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIAT 245 (471)
Q Consensus 167 ~~~~~~l~v~~-~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 245 (471)
.+....|.|.. ..+|.+...+ ...+.+|+.++|.|.+ .+. .+.+.|+|++..+.... ......+.|.|.+++.
T Consensus 80 ~s~~~~l~V~~~~~~p~i~~~p--~~~v~~G~~v~l~C~~-~~~-~~~~~w~k~g~~~~~~~--~~~~~~~~L~i~~v~~ 153 (184)
T 2gi7_A 80 PSDQLELVATGVFAKPSLSAQP--GPAVSSGGDVTLQCQT-RYG-FDQFALYKEGDPAPYKN--PERWYRASFPIITVTA 153 (184)
T ss_dssp CCCCEEEEEESSSCCCEEEEEC--CCSSCCTTCEEEEEEC-SSC-CCEEEEEECCCCTTSCC--CCEEEEESSSEEEETT
T ss_pred CCCCEEEEecCcCCCCEEEeCC--CceecCCCcEEEEEEc-CCC-CcEEEEEECCCcCccee--cCCCceEEEEEccCCc
Confidence 23345555543 2345555544 3356799999999998 444 46999999998755422 2233366799999999
Q ss_pred CCCeEEEEEEEcCCC
Q psy17058 246 GDEGKYTCIAENSAG 260 (471)
Q Consensus 246 ~d~G~Y~C~~~~~~~ 260 (471)
+|+|.|+|.+.|..+
T Consensus 154 ~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 154 AHSGTYRCYSFSSRD 168 (184)
T ss_dssp CCSEEEEEEEECTTS
T ss_pred cCCeEEEEEEEeCCC
Confidence 999999999999754
No 150
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.87 E-value=3.1e-21 Score=170.59 Aligned_cols=184 Identities=22% Similarity=0.415 Sum_probs=137.0
Q ss_pred CCCcEEEcC----CceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc--------cCcEEEEcCCCCCCCeEEE
Q psy17058 90 QANEVQVTP----RQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI--------AGETLIINGITKADEGVYI 156 (471)
Q Consensus 90 ~~~~v~~~p----~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~--------~~~~L~i~~v~~~D~G~Y~ 156 (471)
.+|.+...+ ....+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKN-GKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT 92 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEET-TEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEEC-CccccccccccceeeecCcceEEEecCCcccCEEEE
Confidence 345554444 6788999999999999 7788889999998 555432211 4458999999999999999
Q ss_pred EEEEecCCceeeeeEEEEEeecc--CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEe----CCCCCCcCCCce
Q psy17058 157 CSIQNAQGNVFQDYASIQVDKRE--MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIR----PDNDGKFGPDVE 230 (471)
Q Consensus 157 C~~~~~~~~~~~~~~~l~v~~~~--~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~----~~~~~~~~~~~~ 230 (471)
|.+.|..+. ......+.|.... +|.+.........+.+|+.++|.|.+ .+.|.+.+.|++ ++..+.......
T Consensus 93 C~~~n~~~~-~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~v~W~~~~~~~g~~~~~~~~~~ 170 (231)
T 3ojm_B 93 CVVENEYGS-INHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKV-YSDAQPHIQWIKHVEKNGSKYGPDGLPY 170 (231)
T ss_dssp EEEEETTEE-EEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCE-ECSSCCEEEEEEECCBTTBSBCTTSCBC
T ss_pred EEEecccCc-ccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEE-ecCCCCEEEEEECCCCCCccccCCCcce
Confidence 999998776 5556666665322 23333333445678899999999999 778889999999 665543332211
Q ss_pred E---------EeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCce
Q psy17058 231 V---------YQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAV 276 (471)
Q Consensus 231 ~---------~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~ 276 (471)
. ....+.|.|.++...|+|.|+|.+.|..|..+..+.|.|..+|..
T Consensus 171 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 171 LKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp EEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC--
T ss_pred EeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCC
Confidence 1 111346999999999999999999999999999999999887654
No 151
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.87 E-value=1.7e-21 Score=164.43 Aligned_cols=167 Identities=17% Similarity=0.267 Sum_probs=125.4
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCe-EEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCce
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSAT-IKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNV 166 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~-v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 166 (471)
..+|.+.+.|....+.+|++++|.|. .+.|.+. +.|+++ +..+.. ....|.|.+++.+|+|.|+|.+.|..+
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~-~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n~~~-- 78 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHN-ESLISS---QASSYFIDAATVNDSGEYRCQTNLSTL-- 78 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEET-TEEEES---SCSEEEESSCCGGGCEEEEEECSSSCC--
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEEC-CEEccC---CceEEEEeCCCcccCEEEEEEeeCCcc--
Confidence 46788999998889999999999999 6666555 899999 554432 467999999999999999999987543
Q ss_pred eeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCC
Q psy17058 167 FQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATG 246 (471)
Q Consensus 167 ~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 246 (471)
+....+.|. .++... ... ...+.+|+.++|.|.+..+.|.+.+.|+|++..+. .......|.|.+++.+
T Consensus 79 -s~~~~l~V~--~~~~~~-~~~-~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~------~~~~~~~L~i~~v~~~ 147 (175)
T 1fnl_A 79 -SDPVQLEVH--IGWLLL-QAP-RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRK------YFHHNSDFHIPKATLK 147 (175)
T ss_dssp -CCCEEEEEE--CSSEEE-ECS-CSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEE------EEEECCCEEESSCCGG
T ss_pred -cccEEEEEe--CCCcee-eCC-CceecCCCCEEEEEEcCCCCCceEEEEEECCeEcc------CCCCCCEEEEcccChh
Confidence 334455554 334333 332 34678999999999994344446999999987632 2233678999999999
Q ss_pred CCeEEEEEEEcCCCc-eEEEEEEEEEe
Q psy17058 247 DEGKYTCIAENSAGK-EVMNAYIHVLT 272 (471)
Q Consensus 247 d~G~Y~C~~~~~~~~-~~~~~~l~V~~ 272 (471)
|+|.|+|.+.|..+. .+..+.|.|..
T Consensus 148 d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 148 DSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred hCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 999999999996543 44556666653
No 152
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.87 E-value=5.5e-22 Score=173.77 Aligned_cols=184 Identities=28% Similarity=0.489 Sum_probs=134.4
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC--CceEEeeeceE----EEeccCCCCCeEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP--DVEVYQELGVL----RFNNIATGDEGKYT 252 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~l----~i~~~~~~d~G~Y~ 252 (471)
.+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+.... ...+...++.+ .|.+++..|+|.|+
T Consensus 8 ~~P~i~~~p-~~~~v~~G~~v~L~C~~-~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 85 (217)
T 2vr9_A 8 QSPRIIEHP-TDLVVKKNEPATLNCKV-EGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYW 85 (217)
T ss_dssp CCCEEEECC-CCEEECTTSCEEECCEE-ECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEE
T ss_pred CCCEEecCC-CceEEeCCCcEEEEEEc-CCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEE
Confidence 355555554 45678899999999999 678889999999987754432 12222222333 67889999999999
Q ss_pred EEEEcCCCce-EEEEEEEEEe-CCceeeCCCccEEecCCCcEEEEEEE-eecCCCeEEEEeCCccCCCcc-------ccc
Q psy17058 253 CIAENSAGKE-VMNAYIHVLT-LPAVTITPSEYVSVRPGEPLTLECEA-TGRPMPTVSWVKYIAPFDRNL-------ERD 322 (471)
Q Consensus 253 C~~~~~~~~~-~~~~~l~V~~-~p~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~i~W~~~~~~~~~~~-------~~~ 322 (471)
|.+.|..+.. +..+.|.|.. +|.+...+ ....+.+|+.+.|.|.+ .|.|.+.+.|++++..+.... ...
T Consensus 86 C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~-~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~ 164 (217)
T 2vr9_A 86 CVAKNRVGQAVSRHASLQIAVLRDDFRVEP-KDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRV 164 (217)
T ss_dssp EEEEETTEEEECCCEEEEECEECCSCSBCC-CCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSE
T ss_pred EEEecCCCccccccceEEEEEeCCCcEECC-CccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcE
Confidence 9999987754 3356666665 34444443 35678999999999999 899999999999998776221 111
Q ss_pred ccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecC
Q psy17058 323 ELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 323 ~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 365 (471)
.....++|.|.+++.+|+|.|+|.|.|..|....++.+.+...
T Consensus 165 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~ 207 (217)
T 2vr9_A 165 RIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQV 207 (217)
T ss_dssp EEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred EecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEe
Confidence 1224458999999999999999999999999877755555543
No 153
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.87 E-value=3.5e-21 Score=168.78 Aligned_cols=173 Identities=21% Similarity=0.443 Sum_probs=135.0
Q ss_pred cCCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCce
Q psy17058 88 SPQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNV 166 (471)
Q Consensus 88 ~~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 166 (471)
....+.|.+.|..+.+.+|+++.|.|. .+.|.+.+.|+++ +..+... ....|.|.+++.+|+|.|+|.+.+..+..
T Consensus 15 ~~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~ 91 (218)
T 3k0w_A 15 VPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKM-NKEIPNG--NTSELIFNAVHVKDAGFYVCRVNNNFTFE 91 (218)
T ss_dssp ----CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEET-TEECTTC--CSSEEEETTCCGGGCEEEEEEEECTTCCE
T ss_pred cCCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEEC-CEECCCC--CCCEEEEccCChhhCeEeEEEEEcCCCCc
Confidence 356788999999999999999999999 8888999999999 5544332 46799999999999999999999987753
Q ss_pred eeeeEEEEEeecc-------------CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEe
Q psy17058 167 FQDYASIQVDKRE-------------MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQ 233 (471)
Q Consensus 167 ~~~~~~l~v~~~~-------------~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~ 233 (471)
.+....+.|.... +|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+....
T Consensus 92 ~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~v~~G~~v~L~C~~-~g~p~~~v~W~~~~~~~~~~~------ 163 (218)
T 3k0w_A 92 FSQWSQLDVCDIPESFQRSVDGVSESKLQICVEP-TSQKLMPGSTLVLQCVA-VGSPIPHYQWFKNELPLTHET------ 163 (218)
T ss_dssp ECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECC-CCEEECTTCCEEEECEE-EBSSCCEEEEEETTEECTTCC------
T ss_pred eeeEEEEEEEccCcccccccccccCCCceEEECC-CceeecCCCcEEEEEEe-cccCCCeEEEEECCEECCCCC------
Confidence 4555666665321 13444433 34578899999999999 788999999999987644332
Q ss_pred eeceEEEeccCCCCCeEEEEEEEcCCCc-eEEEEEEEEEe
Q psy17058 234 ELGVLRFNNIATGDEGKYTCIAENSAGK-EVMNAYIHVLT 272 (471)
Q Consensus 234 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~ 272 (471)
...|.|.++..+|.|.|+|.+.|..|. .+..+.|.|..
T Consensus 164 -~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 164 -KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp -SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred -CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 457999999999999999999998776 55566777755
No 154
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.87 E-value=6.2e-22 Score=177.98 Aligned_cols=201 Identities=12% Similarity=0.150 Sum_probs=118.3
Q ss_pred CCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-----CCeEEEEeCCC
Q psy17058 147 ITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-----SPTQTWIRPDN 221 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-----~~~v~W~~~~~ 221 (471)
++.+|+|.|+|.|. +. ......+.+ ..++.+... +....+.+|+.++|.|.+ .+.| .+.+.|+|++.
T Consensus 11 v~~~dsg~Y~C~a~---g~-~~~~~~~~~--~~~~~~~~~-p~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~~ 82 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GY-SFTNYWMNW--LRELVMTQS-PLTLSVTIGQPASISCKS-SQSLLYSNGKTYLNWLLQRP 82 (254)
T ss_dssp ---------------------------------CCCEEEE-CSEEEECTTSCEEEEEEE-SSCCBCSSSCBCEEEEEECT
T ss_pred ecCCccEEEEEcCc---hh-hhhhhhhhe--eeceeEEeC-CceEEecCCCcEEEEeec-cCcccccCCCCceEEEEeCC
Confidence 78899999999998 22 111222222 224444433 345678899999999999 5665 48999998542
Q ss_pred CCC--------------cCCCceEEee--eceEEEeccCCCCCeEEEEEEEcCCCce-EEEEEEEEEe---CCceeeCCC
Q psy17058 222 DGK--------------FGPDVEVYQE--LGVLRFNNIATGDEGKYTCIAENSAGKE-VMNAYIHVLT---LPAVTITPS 281 (471)
Q Consensus 222 ~~~--------------~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~---~p~~~~~~~ 281 (471)
... ...++.+... ...|.|.+++.+|+|.|+|.+.|..+.. .....|.|.. +|.+.+.+.
T Consensus 83 g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~ 162 (254)
T 2c1o_A 83 GQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPP 162 (254)
T ss_dssp TSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECC
T ss_pred CCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecC
Confidence 211 1234444332 2379999999999999999999875532 2223555553 465655433
Q ss_pred ccEEecCCCcEEEEEEEee-cCC-CeEEEEeCCccCCCc-ccc--------cccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 282 EYVSVRPGEPLTLECEATG-RPM-PTVSWVKYIAPFDRN-LER--------DELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 282 ~~~~~~~g~~v~l~C~~~g-~p~-~~i~W~~~~~~~~~~-~~~--------~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
.. ....|+.+.|.|.+.| .|+ +.+.|++++..+... ... ......+.|.|.++..+|+|.|+|.|.|.
T Consensus 163 ~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 241 (254)
T 2c1o_A 163 SS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHK 241 (254)
T ss_dssp CH-HHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECT
T ss_pred Ch-hhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcC
Confidence 22 2335789999999998 444 469999999876543 110 01123568999999999999999999998
Q ss_pred CCceEE
Q psy17058 351 AGTEEK 356 (471)
Q Consensus 351 ~g~~~~ 356 (471)
......
T Consensus 242 ~~~~~~ 247 (254)
T 2c1o_A 242 TSTSPI 247 (254)
T ss_dssp TCSSCE
T ss_pred CCCCcc
Confidence 876533
No 155
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.87 E-value=2.8e-21 Score=164.22 Aligned_cols=168 Identities=18% Similarity=0.344 Sum_probs=126.9
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc---------cCcEEEEcCCCCCCCeEEEEEEE
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI---------AGETLIINGITKADEGVYICSIQ 160 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~---------~~~~L~i~~v~~~D~G~Y~C~~~ 160 (471)
+|.|...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.+.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKD-GAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEET-TEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEEC-CeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 466777888899999999999999 7788899999998 555544322 13689999999999999999999
Q ss_pred ecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCCCcCCCceEEeeeceEE
Q psy17058 161 NAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDGKFGPDVEVYQELGVLR 239 (471)
Q Consensus 161 ~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~l~ 239 (471)
+..+...+....|.|. .+|.+...+. ...+.+|+.++|.|.+ .+.|.+ .+.|++++..+..... ....|.
T Consensus 81 ~~~~~~~~~~~~l~V~--~~p~~~~~~~-~~~~~~g~~~~l~C~~-~g~p~p~~v~W~~~~~~~~~~~~-----~~~~L~ 151 (182)
T 1rhf_A 81 DGGETEISQPVWLTVE--GVPFFTVEPK-DLAVPPNAPFQLSCEA-VGPPEPVTIVWWRGTTKIGGPAP-----SPSVLN 151 (182)
T ss_dssp SCTTCEECCCEEEEEE--CSCEEEECCC-CEEECTTCCEEEEEEE-ECSSSCCEEEEEETTEECSCSEE-----SSEEEE
T ss_pred cCCCcEEEEEEEEEEe--cCCeEEecCc-ceEecCCCEEEEEeEe-cCCCCCCEEEEEcCCeECCCCCC-----CceEEE
Confidence 8766433444555554 6677666544 4578899999999999 788888 9999999876433211 366789
Q ss_pred EeccCCCCCeEEEEEEEcCCCceE-EEEEEEE
Q psy17058 240 FNNIATGDEGKYTCIAENSAGKEV-MNAYIHV 270 (471)
Q Consensus 240 i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~V 270 (471)
|.++ +|+|.|+|.+.|..|... ..+.|.|
T Consensus 152 i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 152 VTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp ECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred Eecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 9988 589999999999988764 3666665
No 156
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.87 E-value=1.7e-21 Score=170.62 Aligned_cols=180 Identities=27% Similarity=0.445 Sum_probs=134.8
Q ss_pred cCCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-------cCcEE----EEcCCCCCCCeEE
Q psy17058 88 SPQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-------AGETL----IINGITKADEGVY 155 (471)
Q Consensus 88 ~~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-------~~~~L----~i~~v~~~D~G~Y 155 (471)
...+|.|...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ..+.+ .|.+++.+|+|.|
T Consensus 6 ~~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 6 QYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKD-GEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEET-TEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEE
T ss_pred ccCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEEC-CcCccCCCccceeEEecCCceEEEEEeccCCcccCceE
Confidence 457899999999999999999999999 7888899999998 555443211 22223 6889999999999
Q ss_pred EEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc--------CC
Q psy17058 156 ICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF--------GP 227 (471)
Q Consensus 156 ~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~--------~~ 227 (471)
+|.+.|..+........+.|... +|.+...+ ....+.+|+.++|.|.+..+.|.+.+.|++++..+.. ..
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~~-~~~~~~~~-~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~ 162 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAVL-RDDFRVEP-KDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASS 162 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECEE-CCSCSBCC-CCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCC
T ss_pred EEEEecCCCccccccceEEEEEe-CCCcEECC-CccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCC
Confidence 99999987763344566666542 23333333 3556889999999999866788999999999876542 22
Q ss_pred CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEE
Q psy17058 228 DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVL 271 (471)
Q Consensus 228 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 271 (471)
+.... ..+.|.|.+++.+|.|.|+|.+.|..|....+..+.+.
T Consensus 163 ~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 163 RVRIV-DGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp SEEEE-TTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cEEec-CCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 22222 35689999999999999999999999887665544443
No 157
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.87 E-value=3.4e-21 Score=166.17 Aligned_cols=165 Identities=16% Similarity=0.223 Sum_probs=116.7
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCC---C---cccCcEEEEcCCCCCCCeEEEEEEEe
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPP---N---MIAGETLIINGITKADEGVYICSIQN 161 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~---~---~~~~~~L~i~~v~~~D~G~Y~C~~~~ 161 (471)
..+|.|...|. ..+.+|++++|.|. .+.+. .+.|+|+ +..+.. . ......|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 3 LPKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYRE-KKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEES-SSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEEC-CccccccccccccCCcccEEEECCCCHHHCeEEEEEEEC
Confidence 36788888886 48999999999999 55554 7999999 555421 1 11568999999999999999999998
Q ss_pred cC-Cc-eeeeeEEEEEee-ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCC-ceEEe---e
Q psy17058 162 AQ-GN-VFQDYASIQVDK-REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPD-VEVYQ---E 234 (471)
Q Consensus 162 ~~-~~-~~~~~~~l~v~~-~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~-~~~~~---~ 234 (471)
.. +. ..+....|.|.. ...|.+...+ ...+.+|+.++|.|.+ .+. .+.+.|+|++..+..... ..... .
T Consensus 80 ~~~g~~~~s~~~~l~V~~~~~~p~i~~~~--~~~v~~G~~v~L~C~~-~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~ 155 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTGAYIKPTLSAQP--SPVVNSGGNVTLQCDS-QVA-FDGFILCKEGEDEHPQCLNSQPHARGSS 155 (198)
T ss_dssp TTTEECCCCCCEEEEEECSSCCCEEEEES--CSEEETTCCEEEEEEC-SSC-CSEEEEEEC------CEEEC------CC
T ss_pred CCCCcccCCccEEEEEcccccCCccccCC--ccccCCCCcEEEEEec-CCC-CcEEEEEECCCccCCccccccccCCCcc
Confidence 76 32 134455666654 2245544433 3468899999999999 555 679999999887432211 11111 1
Q ss_pred eceEEEeccCCCCCeEEEEEEEcCCC
Q psy17058 235 LGVLRFNNIATGDEGKYTCIAENSAG 260 (471)
Q Consensus 235 ~~~l~i~~~~~~d~G~Y~C~~~~~~~ 260 (471)
...|.|.+++.+|+|.|+|.|.|..+
T Consensus 156 ~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 156 RAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp EEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred eeEEEecccCcccCeEEEEEEEeCCC
Confidence 36899999999999999999999765
No 158
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.87 E-value=1e-21 Score=170.88 Aligned_cols=179 Identities=20% Similarity=0.391 Sum_probs=133.8
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCC---------C----CCCcc-cCcEEEEcCCCCCCCeE
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQ---------L----PPNMI-AGETLIINGITKADEGV 154 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~---------~----~~~~~-~~~~L~i~~v~~~D~G~ 154 (471)
.++.+...|..+.+.+|+++.|.|. .+.|.+.+.|++++... + ..+.. ....|.|.+++.+|+|.
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGT 82 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSE
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcE
Confidence 4567777888899999999999999 77788999999984431 0 11111 44789999999999999
Q ss_pred EEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCC------
Q psy17058 155 YICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPD------ 228 (471)
Q Consensus 155 Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~------ 228 (471)
|+|.+.+..+. ......+.+.+..+|.+..... ...+.+|+.++|.|.+..+.|.+.+.|++++..+.....
T Consensus 83 Y~C~~~~~~g~-~~~~~~~~l~V~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~ 160 (209)
T 1nbq_A 83 YTCMVSEEGGN-SYGEVKVKLIVLVPPSKPTVNI-PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFS 160 (209)
T ss_dssp EEEEEEETTSS-CEECCEEECCEEBCCCCCCCCC-BSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCT
T ss_pred EEEEEecCCCC-ccceEEEEEEEecCCcCCCccc-ccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeee
Confidence 99999997653 3344555555555665544333 346789999999999657889999999999987654332
Q ss_pred ---ceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEE--EEEEEE
Q psy17058 229 ---VEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVM--NAYIHV 270 (471)
Q Consensus 229 ---~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~l~V 270 (471)
+.+....+.|.|.+++.+|.|.|+|.+.|..|.... .+.|.|
T Consensus 161 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 161 NSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp TCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred ccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 222223568999999999999999999999888733 344444
No 159
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.87 E-value=4e-21 Score=165.48 Aligned_cols=178 Identities=15% Similarity=0.257 Sum_probs=129.2
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceE-EeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEV-YQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
.+|.+...+.. .+.+|+.++|.|.+ .+ +.+.+.|+|++..+........ ....+.|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~~P~i~~~p~~--~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 3p2t_A 4 PKPTLWAEPGS--VISWGNSVTIWCQG-TL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRS 79 (196)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEEC-CT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEccCCC--cCCCCCcEEEEeeC-CC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeC
Confidence 35666666543 68899999999998 44 6789999999987543211111 12356899999999999999999999
Q ss_pred CCC--ceEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc---ccccCceeE
Q psy17058 258 SAG--KEVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE---RDELTSRAV 329 (471)
Q Consensus 258 ~~~--~~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~---~~~~~~~~~ 329 (471)
..+ ..+..+.|.|.. +|.+...+. ..+.+|++++|.|.+.+. ++.+.|++++..+..... .........
T Consensus 80 ~~g~~~~s~~~~l~V~~~~~~p~~~~~~~--~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~ 156 (196)
T 3p2t_A 80 PVGWSQPSDPLELVMTGAYSKPTLSALPS--PLVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAE 156 (196)
T ss_dssp TTEEBCCCCCEEEEEECSSCCCEEEEESC--SEECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEE
T ss_pred CCcccCCCccEEEEecCCCCCCEEEeCCc--ceecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceE
Confidence 876 235567777764 344544443 267899999999999874 468999999887643211 112235678
Q ss_pred EEEeecCCCCCeEEEEEEEcCCC-----ceEEEEEEEEe
Q psy17058 330 YTIASVRESDAGQYKCIGKNSAG-----TEEKVITVAVE 363 (471)
Q Consensus 330 l~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~ 363 (471)
|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|.
T Consensus 157 L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 157 FPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp EEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred EEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 99999999999999999999876 23445666653
No 160
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.87 E-value=1.6e-21 Score=167.95 Aligned_cols=164 Identities=15% Similarity=0.164 Sum_probs=109.5
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCC------cccCcEEEEcCCCCCCCeEEEEEEEec
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPN------MIAGETLIINGITKADEGVYICSIQNA 162 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~------~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 162 (471)
.+|.|...|.. .+.+|++++|.|. .+.+. .+.|+|+ +..+... ......|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKE-GSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEET-TCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEEC-CCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 67888888874 8999999999999 55554 9999999 5444321 114678999999999999999999887
Q ss_pred CCc-eeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCc-eEE---eeec
Q psy17058 163 QGN-VFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDV-EVY---QELG 236 (471)
Q Consensus 163 ~~~-~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~-~~~---~~~~ 236 (471)
.+. ..+....|.|... .+|.+...+ ...+.+|+.++|.|.+ .+.| +.+.|+|++..+...... ... ....
T Consensus 81 ~g~~~~s~~~~l~V~~~~~~p~i~~~~--~~~v~~G~~v~L~C~~-~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~ 156 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGFYNKPTLSALP--SPVVTSGENVTLQCGS-RLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQA 156 (196)
T ss_dssp TEECBCCCCEEEEEECSSCCCEEEC-------------CEEEEEE-SSCC-SEEEEEEC---CCEEEEECEECTTSCEEE
T ss_pred CCcCCcCccEEEEecCCCCCCeEEccC--CccccCCCcEEEEEEc-CCCC-CEEEEEccCCcccccccccccccCCCcee
Confidence 543 1233455666532 234444332 2467899999999999 6667 899999999874321111 111 1136
Q ss_pred eEEEeccCCCCCeEEEEEEEcCCC
Q psy17058 237 VLRFNNIATGDEGKYTCIAENSAG 260 (471)
Q Consensus 237 ~l~i~~~~~~d~G~Y~C~~~~~~~ 260 (471)
.|.|.+++.+|+|.|+|.+.|..+
T Consensus 157 ~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 157 LFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EEECCCCBTTBCEEEEEEEEETTE
T ss_pred EEEeeecCcccCeeEEEEEEccCC
Confidence 899999999999999999998753
No 161
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.87 E-value=7e-22 Score=171.89 Aligned_cols=173 Identities=20% Similarity=0.359 Sum_probs=133.6
Q ss_pred CCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCC------------CcCCCceEEeeeceEEEeccCCCCCeEEEEE
Q psy17058 187 PNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDG------------KFGPDVEVYQELGVLRFNNIATGDEGKYTCI 254 (471)
Q Consensus 187 ~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 254 (471)
++....+.+|+.++|.|.+ .+.|.+.+.|++++..+ ....++... ...|.|.+++.+|+|.|+|.
T Consensus 10 ~~~~~~v~~G~~v~L~C~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~~~L~i~~~~~~d~G~Y~C~ 86 (209)
T 1nbq_A 10 SEPEVRIPENNPVKLSCAY-SGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL--PTGITFKSVTREDTGTYTCM 86 (209)
T ss_dssp SCSBCCEETTCCCEEECEE-ESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE--TTEEECSCCCTTSCSEEEEE
T ss_pred CCCceEEEcCCCEEEEEEE-eCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee--ccEEEEeeCCHHHCcEEEEE
Confidence 3445678899999999999 67788999999988762 122333332 47899999999999999999
Q ss_pred EEcCCC--ceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEE-eecCCCeEEEEeCCccCCCcccc---------c
Q psy17058 255 AENSAG--KEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEA-TGRPMPTVSWVKYIAPFDRNLER---------D 322 (471)
Q Consensus 255 ~~~~~~--~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~i~W~~~~~~~~~~~~~---------~ 322 (471)
+.+..+ ..+..+.|.|..+|.+...+. ...+.+|+.+.|.|.+ .++|.+.+.|++++..+...... .
T Consensus 87 ~~~~~g~~~~~~~~~l~V~~~p~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 165 (209)
T 1nbq_A 87 VSEEGGNSYGEVKVKLIVLVPPSKPTVNI-PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYV 165 (209)
T ss_dssp EEETTSSCEECCEEECCEEBCCCCCCCCC-BSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCC
T ss_pred EecCCCCccceEEEEEEEecCCcCCCccc-ccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceE
Confidence 999855 345677888888887655543 3468899999999997 88999999999999887643211 1
Q ss_pred ccCceeEEEEeecCCCCCeEEEEEEEcCCCce--EEEEEEEEe
Q psy17058 323 ELTSRAVYTIASVRESDAGQYKCIGKNSAGTE--EKVITVAVE 363 (471)
Q Consensus 323 ~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~ 363 (471)
.....+.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 166 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 166 LNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp CCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred EcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 12256789999999999999999999999988 444555553
No 162
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=4.6e-21 Score=163.85 Aligned_cols=173 Identities=15% Similarity=0.245 Sum_probs=122.6
Q ss_pred CCCcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCCCCCC----C--CcccCcEEEEcCCCCCCCeEEEEEEEecC
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQEQLP----P--NMIAGETLIINGITKADEGVYICSIQNAQ 163 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~~~----~--~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~ 163 (471)
.+|.|...|.. .+.+|++|+|.|....+...+.|+|+ +..+. . ....+..|.|.+++.+|+|.|+|.+.+..
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 80 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNYGAVEYQLHFE-GSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGE 80 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTTCCEEEEEET-TEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCCCCCEEEEEEC-CCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCC
Confidence 57889998877 89999999999993334578999999 44322 1 11246789999999999999999998754
Q ss_pred Cc-eeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEe
Q psy17058 164 GN-VFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFN 241 (471)
Q Consensus 164 ~~-~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~ 241 (471)
+. ..+....|.|... .+|.+...+ ...+.+|+.++|.|.+ .+ +.+.+.|+|++..+.. ........+.|.|.
T Consensus 81 ~~~~~s~~~~l~V~~~~~~p~i~~~p--~~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~--~~~~~~~~~~L~I~ 154 (188)
T 1oll_A 81 LWSEPSNLLDLVVTEMYDTPTLSVHP--GPEVISGEKVTFYCRL-DT-ATSMFLLLKEGRSSHV--QRGYGKVQAEFPLG 154 (188)
T ss_dssp EECCCCCCEEEEEESCSCCCEEEEES--CSEEETTCEEEEEEEC-SS-SCSEEEEEEESSSCEE--EEEECSSEEEEEEE
T ss_pred CCCCCCCceEEEecccCCCCeEEECC--CCccccCCEEEEEEEc-CC-CCCEEEEEECCccccc--cccCCCceeEEEEC
Confidence 32 1233455555532 245555444 3467899999999998 33 4569999999877543 11122335689999
Q ss_pred ccCCCCCeEEEEEEEcCCC---ceEEEEEEEE
Q psy17058 242 NIATGDEGKYTCIAENSAG---KEVMNAYIHV 270 (471)
Q Consensus 242 ~~~~~d~G~Y~C~~~~~~~---~~~~~~~l~V 270 (471)
+++.+|+|.|+|.+.|... ..+..+.|.|
T Consensus 155 ~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V 186 (188)
T 1oll_A 155 PVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLV 186 (188)
T ss_dssp ECCGGGCEEEEEECEEETTEECCCCCCEEEEE
T ss_pred CCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEe
Confidence 9999999999999987642 2334455554
No 163
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.86 E-value=7.7e-21 Score=166.25 Aligned_cols=177 Identities=11% Similarity=0.125 Sum_probs=125.3
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCCCCCCCC------cccCc--EEEEcCCCCCCCeEEEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQEQLPPN------MIAGE--TLIINGITKADEGVYICSIQ 160 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~~~~~------~~~~~--~L~i~~v~~~D~G~Y~C~~~ 160 (471)
..+|.|...|. ..+.+|++++|.|....+.+.+.|+|+ +..+... ..... .|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~~~~~~~W~k~-g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIREAYLTQLMII-KNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCTTCSEEEEEEE-ETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCCCCCEEEEEEC-CCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 46789999887 579999999999993336789999999 4443211 11345 89999999999999999999
Q ss_pred ecCCc-eeeeeEEEEEee-ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceE
Q psy17058 161 NAQGN-VFQDYASIQVDK-REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVL 238 (471)
Q Consensus 161 ~~~~~-~~~~~~~l~v~~-~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l 238 (471)
|..+. ..+....|.|.. ..+|.+...+ ...+.+|+.++|.|.+ .+.|.+.+.|+|++..+... .......+.|
T Consensus 85 n~~~~~~~s~~~~l~V~~~~~~P~i~~~p--~~~v~~G~~v~L~C~~-~~~~~~~~~W~k~g~~~~~~--~~~~~~~~~L 159 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTGLYGKPFLSADR--GLVLMPGENISLTCSS-AHIPFDRFSLAKEGELSLPQ--HQSGEHPANF 159 (218)
T ss_dssp ETTTEEEECCCEEEEEECSSCCCEEEESS--CSEECTTCCCEEEEEC-SSSCCSEEEEEETTCSSCCS--EEECSSSEEE
T ss_pred cCCCceeecCCEEEEEcCcccCCEEEeCC--CCccCCCCCEEEEEeC-CCCCCCEEEEEECCCccccc--ccCCCccCEE
Confidence 97653 123344555543 2345554444 3467899999999966 56677899999999875432 1222235689
Q ss_pred EEeccCCCCCeEEEEEEEcCCC-----ceEEEEEEEEEe
Q psy17058 239 RFNNIATGDEGKYTCIAENSAG-----KEVMNAYIHVLT 272 (471)
Q Consensus 239 ~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~V~~ 272 (471)
.|.+++.+|+|.|+|.+.|... ..+..+.|.|..
T Consensus 160 ~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 160 SLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp ECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred EEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 9999999999999999998632 233445666654
No 164
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.86 E-value=2.4e-21 Score=169.15 Aligned_cols=176 Identities=15% Similarity=0.274 Sum_probs=127.0
Q ss_pred EEEcCCceeecCCCcEEEEee-CCCC----CCeEEEEeCC---------------CCCCC-------CCcc--------c
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SNDP----SATIKWSKDN---------------QEQLP-------PNMI--------A 138 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~~p----~~~v~W~~~~---------------~~~~~-------~~~~--------~ 138 (471)
|...+..+.+.+|++++|.|. .+.+ .+.+.|++.+ +..+. .+.. .
T Consensus 3 i~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 82 (214)
T 3jz7_A 3 ITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSG 82 (214)
T ss_dssp ---CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGT
T ss_pred eecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCC
Confidence 344456778999999999999 5555 4699999842 11111 1111 2
Q ss_pred CcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEe
Q psy17058 139 GETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIR 218 (471)
Q Consensus 139 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~ 218 (471)
..+|.|.+++.+|+|.|+|.+.+..+. ......|.|. .+|.+...+. ...+.+|+.++|.|.+..+.|.+.+.|++
T Consensus 83 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~-~~~~~~l~V~--~~p~~~~~~~-~~~~~~g~~v~l~C~~~~g~p~~~v~W~~ 158 (214)
T 3jz7_A 83 DASINVTNLQLSDIGTYQCKVKKAPGV-ANKKFLLTVL--VKPSGTRCFV-DGSEEIGNDFKLKCEPKEGSLPLQFEWQK 158 (214)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEE-EEEEEEEEEE--CCCBSCEEEE-ESCCBTTCCEEEEEECSBCCSSCEEEEEE
T ss_pred cccEEEccCChhhCeEEEEEEEeCCCc-cccEEEEEEE--cCCCCceeee-ecceecCCcEEEEecCCCCCCCCEEEEEE
Confidence 467999999999999999999988765 4555555554 4444332221 22367899999999997788999999999
Q ss_pred CCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeC
Q psy17058 219 PDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTL 273 (471)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~ 273 (471)
++..............++.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 159 LSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp CSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred CCCCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 7655444433333333668999999999999999999999999988888888643
No 165
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.86 E-value=6.6e-21 Score=164.08 Aligned_cols=165 Identities=15% Similarity=0.212 Sum_probs=122.6
Q ss_pred CCCcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCCCCCCCCc------ccCcEEEEcCCCCCCCeEEEEEEEecC
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQEQLPPNM------IAGETLIINGITKADEGVYICSIQNAQ 163 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~~~~~~------~~~~~L~i~~v~~~D~G~Y~C~~~~~~ 163 (471)
.+|.|...|.. .+.+|++++|.|....+.+.+.|+|+ +..+.... .....|.|.+++.+|+|.|+|.+.|..
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTLEAREYRLDKE-ESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTTCCEEEEEET-TSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCCCCCEEEEEEC-CCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 57888888877 89999999999993337789999999 54443211 145789999999999999999999987
Q ss_pred Cc-eeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCce---EEeeeceE
Q psy17058 164 GN-VFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVE---VYQELGVL 238 (471)
Q Consensus 164 ~~-~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~---~~~~~~~l 238 (471)
+. ..+....|.|... .+|.+...+. ..+.+|+.++|.|.+ .+ +.+.+.|+|++..+....... .....+.|
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~~~~~~~--~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L 157 (196)
T 3p2t_A 82 GWSQPSDPLELVMTGAYSKPTLSALPS--PLVTSGKSVTLLCQS-RS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEF 157 (196)
T ss_dssp EEBCCCCCEEEEEECSSCCCEEEEESC--SEECTTCCEEEEEEE-EE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEE
T ss_pred cccCCCccEEEEecCCCCCCEEEeCCc--ceecCCCeEEEEEec-CC-CCCEEEEEeCCCcccceeecccccccCcceEE
Confidence 62 2344556666532 3455554443 267899999999998 44 456899999988754432111 12235679
Q ss_pred EEeccCCCCCeEEEEEEEcCCC
Q psy17058 239 RFNNIATGDEGKYTCIAENSAG 260 (471)
Q Consensus 239 ~i~~~~~~d~G~Y~C~~~~~~~ 260 (471)
.|.+++.+|+|.|+|.+.|..+
T Consensus 158 ~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 158 PMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EECSCCGGGCEEEEEEEECGGG
T ss_pred EeCCCcccCCCeEEEEEEcCCC
Confidence 9999999999999999999765
No 166
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.86 E-value=2.3e-21 Score=166.90 Aligned_cols=167 Identities=15% Similarity=0.170 Sum_probs=113.8
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCC-ceEEeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPD-VEVYQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
.+|.+...+. ..+.+|+.++|.|.+ .+.|. .+.|+|++..+..... .......+.|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~~P~i~~~p~--~~v~~G~~v~L~C~~-~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 2d3v_A 4 SKATLWAEPG--SVISRGNSVTIRCQG-TLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYS 79 (196)
T ss_dssp CBCEEEEESC--SEEETTCCEEEEEEC-CTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeCCC--CcccCCCeEEEEEeC-CCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeC
Confidence 4566666654 268899999999999 55555 9999999987543211 11122356799999999999999999998
Q ss_pred CCCc--eEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccc----cccCcee
Q psy17058 258 SAGK--EVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLER----DELTSRA 328 (471)
Q Consensus 258 ~~~~--~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~----~~~~~~~ 328 (471)
..+. .+..+.|.|.. +|.+...+ ...+.+|++++|.|.+.+.| +.+.|+|++..+...... .......
T Consensus 80 ~~g~~~~s~~~~l~V~~~~~~p~i~~~~--~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~ 156 (196)
T 2d3v_A 80 PAGWSEPSDPLELVVTGFYNKPTLSALP--SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQA 156 (196)
T ss_dssp TTEECBCCCCEEEEEECSSCCCEEEC-------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEE
T ss_pred CCCcCCcCccEEEEecCCCCCCeEEccC--CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCcee
Confidence 7653 24557788876 34444333 24688999999999999888 899999999876422110 1123457
Q ss_pred EEEEeecCCCCCeEEEEEEEcCCC
Q psy17058 329 VYTIASVRESDAGQYKCIGKNSAG 352 (471)
Q Consensus 329 ~l~i~~~~~~d~G~Y~C~a~n~~g 352 (471)
.|.|.+++.+|+|.|+|.|.|..+
T Consensus 157 ~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 157 LFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EEECCCCBTTBCEEEEEEEEETTE
T ss_pred EEEeeecCcccCeeEEEEEEccCC
Confidence 999999999999999999999765
No 167
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.86 E-value=1.1e-20 Score=164.28 Aligned_cols=170 Identities=16% Similarity=0.258 Sum_probs=128.5
Q ss_pred eeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc-------------------CCCceEEeeeceEEEeccCCCCCeEE
Q psy17058 191 QTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF-------------------GPDVEVYQELGVLRFNNIATGDEGKY 251 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~-------------------~~~~~~~~~~~~l~i~~~~~~d~G~Y 251 (471)
..+.+|+.++|.|.. .+.+.+.+.|++++..... ..+..+.. ++.|.|.+++.+|+|.|
T Consensus 9 ~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~-~~~L~i~~v~~~D~G~Y 86 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHN-LPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYS-NGSLLFQMITMKDMGVY 86 (208)
T ss_dssp SEEETTCCEEEEEEC-CCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECT-TSCEEECSCCGGGCEEE
T ss_pred ceeecCCcEEEEEeC-CCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEec-CCeEEEccccccCCeEE
Confidence 367899999999997 6778889999987643211 11222222 45799999999999999
Q ss_pred EEEEEcCC-CceEEEEEEEEEeC---CceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCce
Q psy17058 252 TCIAENSA-GKEVMNAYIHVLTL---PAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSR 327 (471)
Q Consensus 252 ~C~~~~~~-~~~~~~~~l~V~~~---p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~ 327 (471)
+|.+.+.. +.....+.|.|..+ |.+...+. . +.+|+.+.|.|.+.+.| +.+.|++++..+............
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~--~-~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~~ 162 (208)
T 3r4d_A 87 TLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNT--T-VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQNN 162 (208)
T ss_dssp EEEEECSSCEEEEEEEEEEEECCCCCCEEEESCS--S-CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETTT
T ss_pred EEEEEcccCceeEEEEEEEeccCCCCCEEecCCc--e-EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCCC
Confidence 99999985 45667778888765 34443332 2 88999999999999866 799999999887654333333445
Q ss_pred eEEEEeecCCCCCeEEEEEEEcCCCceE-EEEEEEEecCC
Q psy17058 328 AVYTIASVRESDAGQYKCIGKNSAGTEE-KVITVAVEHRP 366 (471)
Q Consensus 328 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p 366 (471)
.+|.|.++..+|+|.|+|.|.|..|... ..+.|.|..++
T Consensus 163 ~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~ 202 (208)
T 3r4d_A 163 SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDP 202 (208)
T ss_dssp TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC---
T ss_pred CEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCC
Confidence 8899999999999999999999999874 45888888765
No 168
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.86 E-value=6.8e-21 Score=166.07 Aligned_cols=166 Identities=17% Similarity=0.295 Sum_probs=126.0
Q ss_pred cCCCcEEEEee-CC-CCCCeEEEEeCCCCCCCCCcc-------cCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEE
Q psy17058 104 PEGSQVTIECK-SN-DPSATIKWSKDNQEQLPPNMI-------AGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQ 174 (471)
Q Consensus 104 ~~G~~v~l~C~-~~-~p~~~v~W~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~ 174 (471)
.+|+.+.|.|. .+ .|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.+.|..+. ......+.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~-g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~-~~~~~~l~ 92 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHN-GSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTG-HQKTVDLS 92 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEET-TEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCE-EEEEEEEC
T ss_pred EcCceEEEEEEEeccCCCceEEEEEC-CEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcc-eEEEEEEE
Confidence 35677788888 44 46889999999 555543221 2245999999999999999999997765 44444443
Q ss_pred Eee------------------ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEee--
Q psy17058 175 VDK------------------REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQE-- 234 (471)
Q Consensus 175 v~~------------------~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-- 234 (471)
|.. ...|.+....+....+.+|+.++|.|.+ .+.|.+.+.|++++..+....++.+...
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~ 171 (212)
T 2r15_A 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV-WGDPPPEVSWLKNEKALAQTDHCNLKFEAG 171 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEE-ECSSCCEEEEEETTEEECCCSSEEEEEETT
T ss_pred EeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEE-cCCCCceEEEEECCeECccCCCEEEEEcCC
Confidence 321 1145555555556678899999999999 7889999999999987666666655543
Q ss_pred -eceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEe
Q psy17058 235 -LGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLT 272 (471)
Q Consensus 235 -~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~ 272 (471)
...|.|.+++.+|.|.|+|.+.|..|.....+.|.|..
T Consensus 172 ~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 172 RTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 23899999999999999999999999988888888864
No 169
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=1.1e-20 Score=160.84 Aligned_cols=163 Identities=20% Similarity=0.362 Sum_probs=123.5
Q ss_pred eEEcCCeEEEEEEccCCCCCC--eEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy17058 192 TFIVGDRADIQCVLEAGEPSP--TQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIH 269 (471)
Q Consensus 192 ~v~~g~~~~L~C~~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 269 (471)
.+.+|+.++|.|.+ .+.|.+ .+.|++++..+....... ....|.|. +.+|+|.|+|.+.|. ....+.|.
T Consensus 9 ~v~~G~~v~l~C~~-~~~~~p~~~~~W~k~~~~l~~~~~~~---~~~~l~i~--~~~d~G~Y~C~~~n~---~~~~~~l~ 79 (184)
T 3b5h_A 9 VEDLGSKILLTCSL-NDSATEVTGHRWLKGGVVLKEDALPG---QKTEFKVD--SDDQWGEYSCVFLPE---PMGTANIQ 79 (184)
T ss_dssp EEEETTEEEEEEEE-ESCSSCCCEEEEESSSEEEECTTCCC---SEEEEEEC--GGGCCEEEEEEEEST---TSCEEEEE
T ss_pred EEecCCCEEEEEEC-CCCCCCceEEEEEeCCEEeecccccC---CcEEEEEe--chhhCeEEEEEEECC---cCcEEEEE
Confidence 57899999999998 454555 999999887644332221 13345555 689999999999983 33567888
Q ss_pred EEeCCceeeCCCccEEecCCCcEEEEEEEeecC-CCeEEEEe---CCcc-CCCc----ccccccCceeEEEEeecC-CCC
Q psy17058 270 VLTLPAVTITPSEYVSVRPGEPLTLECEATGRP-MPTVSWVK---YIAP-FDRN----LERDELTSRAVYTIASVR-ESD 339 (471)
Q Consensus 270 V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p-~~~i~W~~---~~~~-~~~~----~~~~~~~~~~~l~i~~~~-~~d 339 (471)
|..+|.+...+ ....+.+|+.+.|.|.+.|.| .+.+.|++ ++.. +... ...........|.|.+++ .+|
T Consensus 80 V~~~P~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d 158 (184)
T 3b5h_A 80 LHGPPRVKAVK-SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEAD 158 (184)
T ss_dssp ECCSCCCEESC-SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTS
T ss_pred EecCCceeecC-CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecccccc
Confidence 88889887776 345789999999999999999 78999999 4433 2211 111122345689999999 899
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 340 AGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 340 ~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
+|.|+|.|.|..|.....+.|.|..
T Consensus 159 ~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 159 PGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp SEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CceEEEEEEeCCCcceEEEEEEEec
Confidence 9999999999999999999998864
No 170
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.86 E-value=1.3e-21 Score=168.63 Aligned_cols=158 Identities=16% Similarity=0.223 Sum_probs=113.8
Q ss_pred ceeecCCCcEEEEee----CCCCCCeEEEEeCCCCCCCCC-------------------c-----ccCcEEEEcCCCCCC
Q psy17058 100 QQSAPEGSQVTIECK----SNDPSATIKWSKDNQEQLPPN-------------------M-----IAGETLIINGITKAD 151 (471)
Q Consensus 100 ~~~v~~G~~v~l~C~----~~~p~~~v~W~~~~~~~~~~~-------------------~-----~~~~~L~i~~v~~~D 151 (471)
++++..|++++|.|. .+.|.+.|.|+|+ +...... . .....|.|.+++.+|
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKL-GPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISH 80 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEE-ETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEc-CCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHH
Confidence 567999999999994 6778999999998 4322110 0 034579999999999
Q ss_pred CeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc----CC
Q psy17058 152 EGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF----GP 227 (471)
Q Consensus 152 ~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~----~~ 227 (471)
+|.|+|.|.|..+. ......|.|. .+|.+...+ ....+.+|+.++|.|.+ .+.|.+.++|+++++.+.. ..
T Consensus 81 ~G~Y~C~a~n~~g~-~~~~~~l~V~--~p~~~~~~~-~~~~v~~g~~~~l~C~~-~G~P~P~v~W~~~~~~~~~~~~~~~ 155 (203)
T 4fa8_A 81 DGNYLCRMKLGETE-VTKQEHLSVV--KPLTLSVHS-ERSQFPDFSVLTVTCTV-NAFPHPHVQWLMPEGVEPAPTAANG 155 (203)
T ss_dssp CEEEEEEEEETTEE-EEEEEEEEEE--EEEEEEEEE-EECCSSCSCCEEEEEEE-EEESCCEEEECCC------------
T ss_pred CeEEEEEEEcCCCc-EEEEEEEEec--CCceeeecc-eeEEEcCCCEEEEEEEc-CCCCCCEEEEEECCeeecCcccccc
Confidence 99999999998776 5555555554 455554443 34467799999999999 7899999999988765432 22
Q ss_pred CceEEeeece---EEEeccCCCCCeEEEEEEEcCCCceEE
Q psy17058 228 DVEVYQELGV---LRFNNIATGDEGKYTCIAENSAGKEVM 264 (471)
Q Consensus 228 ~~~~~~~~~~---l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 264 (471)
++.+.. +++ +.|.++..+|+|.|+|.|.|..|....
T Consensus 156 r~~~~~-~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 156 GVMKEK-DGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp CCEECT-TSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred eEEEeC-CCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 333333 333 455789999999999999999998764
No 171
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.86 E-value=7e-21 Score=164.45 Aligned_cols=170 Identities=21% Similarity=0.325 Sum_probs=128.5
Q ss_pred cCCceeecCCCcEEEEee--CCCCC-CeEEEEeCCCCCCC---CCc-c---cCcEEEEcCCCCCCCeEEEEEEEecCCce
Q psy17058 97 TPRQQSAPEGSQVTIECK--SNDPS-ATIKWSKDNQEQLP---PNM-I---AGETLIINGITKADEGVYICSIQNAQGNV 166 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~--~~~p~-~~v~W~~~~~~~~~---~~~-~---~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 166 (471)
.+..+.+.+|+++.|.|. .+.|. +.+.|+++ +..+. ... . .++.|.|.+++.+|+|.|+|.+.+..+..
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~ 92 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN-EFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITK 92 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEES-STTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEEC-CceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCc
Confidence 346788999999999998 46677 89999999 44432 111 1 56789999999999999999999866552
Q ss_pred eee--eEEEEEee-----ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEE
Q psy17058 167 FQD--YASIQVDK-----REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLR 239 (471)
Q Consensus 167 ~~~--~~~l~v~~-----~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~ 239 (471)
... ...+.+.. ..+|.+...+. ...+.+|+.++|.|.+ .+.|.+.+.|++++..+.. .......++.|.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~g~~~~l~C~~-~g~p~p~v~W~~~~~~~~~--~~~~~~~~~~L~ 168 (201)
T 3s97_C 93 SVFSKFIPLIPIPERTTKPYPADIVVQFK-DVYALMGQNVTLECFA-LGNPVPDIRWRKVLEPMPS--TAEISTSGAVLK 168 (201)
T ss_dssp EEECCCEEEEEECCSSCCCEEEEEEEECC-CEEEETTCCEEEEEEE-EEESCCEEEEEETTBCCCT--TCEEETTTTEEE
T ss_pred chhhcccceeeccccccCCCCCceEecCC-ceEEecCCcEEEEEEc-cCCCCCceEEEeCCCcCCC--ceeecCCCCEEE
Confidence 221 22222221 12344544444 5678899999999999 7789999999999886443 334444467899
Q ss_pred EeccCCCCCeEEEEEEEcCCCceEEEEEEEEE
Q psy17058 240 FNNIATGDEGKYTCIAENSAGKEVMNAYIHVL 271 (471)
Q Consensus 240 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 271 (471)
|.++..+|.|.|+|.+.|..|..+..+.|.|.
T Consensus 169 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 169 IFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 99999999999999999999998888888875
No 172
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.86 E-value=4.3e-21 Score=165.56 Aligned_cols=178 Identities=17% Similarity=0.259 Sum_probs=125.0
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCC-ceEEeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPD-VEVYQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
.+|.+...+. ..+.+|+.++|.|.+ .+.|. .+.|+|++..+..... .........|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~~P~i~~~p~--~~v~~G~~v~L~C~~-~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 4 PKPTLWAEPG--SVITQGSPVTLRCQG-GQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCCEEEEESC--SEEETTCCEEEEEEC-CTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEeccCC--CcccCCCcEEEEEEe-cCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEEC
Confidence 4566666554 378899999999999 55554 7999999887532111 11122356899999999999999999999
Q ss_pred CC-C--ceEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccc----cccCce
Q psy17058 258 SA-G--KEVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLER----DELTSR 327 (471)
Q Consensus 258 ~~-~--~~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~----~~~~~~ 327 (471)
.. + ..+..+.|.|.. +|.+...+ ...+.+|++++|.|.+.+. .+.+.|++++..+...... ......
T Consensus 80 ~~~g~~~~s~~~~l~V~~~~~~p~i~~~~--~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 156 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTGAYIKPTLSAQP--SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSR 156 (198)
T ss_dssp TTTEECCCCCCEEEEEECSSCCCEEEEES--CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCE
T ss_pred CCCCcccCCccEEEEEcccccCCccccCC--ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcce
Confidence 76 4 335567788876 34444433 2478899999999999987 6799999999876422111 111235
Q ss_pred eEEEEeecCCCCCeEEEEEEEcCCCce-----EEEEEEEEe
Q psy17058 328 AVYTIASVRESDAGQYKCIGKNSAGTE-----EKVITVAVE 363 (471)
Q Consensus 328 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~ 363 (471)
..|.|.+++.+|+|.|+|.|.|..+.. +..+.|.|.
T Consensus 157 ~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 157 AIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred eEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 899999999999999999999987622 445666664
No 173
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.86 E-value=9.7e-21 Score=165.59 Aligned_cols=180 Identities=15% Similarity=0.177 Sum_probs=130.0
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCc-eEEeeec--eEEEeccCCCCCeEEEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDV-EVYQELG--VLRFNNIATGDEGKYTCIA 255 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~-~~~~~~~--~l~i~~~~~~d~G~Y~C~~ 255 (471)
.+|.+...+. ..+.+|+.++|.|.+ .+ +.+.+.|+|++..+...... ....... .|.|.+++.+|+|.|+|.+
T Consensus 8 ~~P~i~~~p~--~~v~~G~~vtL~C~~-~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 8 PMPFISAKSS--PVIPLDGSVKIQCQA-IR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp CCCCEEESSC--SEEETTCCEEEEECC-CT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEecCC--CccCCCCCEEEEEEc-CC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEE
Confidence 4566666654 368899999999998 44 67899999998875432211 0112244 8999999999999999999
Q ss_pred EcCCCce--EEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEE
Q psy17058 256 ENSAGKE--VMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVY 330 (471)
Q Consensus 256 ~~~~~~~--~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l 330 (471)
.|..+.. +..+.|.|.. +|.+...+ ...+.+|++++|.|.+.+.|.+.+.|+|+|..+.... ........|
T Consensus 84 ~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p--~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~--~~~~~~~~L 159 (218)
T 1uct_A 84 RIGHYRFRYSDTLELVVTGLYGKPFLSADR--GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQH--QSGEHPANF 159 (218)
T ss_dssp EETTTEEEECCCEEEEEECSSCCCEEEESS--CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSE--EECSSSEEE
T ss_pred EcCCCceeecCCEEEEEcCcccCCEEEeCC--CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccc--cCCCccCEE
Confidence 9976533 3446777765 45554444 3478899999999977777888999999998775421 123456899
Q ss_pred EEeecCCCCCeEEEEEEEcCCC-----ceEEEEEEEEecCC
Q psy17058 331 TIASVRESDAGQYKCIGKNSAG-----TEEKVITVAVEHRP 366 (471)
Q Consensus 331 ~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~p 366 (471)
.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|.+.+
T Consensus 160 ~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 160 SLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp ECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC---
T ss_pred EEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecCC
Confidence 9999999999999999998642 23456788887653
No 174
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.86 E-value=5.5e-21 Score=161.37 Aligned_cols=166 Identities=14% Similarity=0.252 Sum_probs=126.6
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCe-EEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPT-QTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~-v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
.+|.+.+.+. ...+.+|+.++|.|.+ .+.|.+. +.|++++..+. ...+.|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~p~i~~~p~-~~~v~~G~~v~L~C~~-~~~p~~~~~~W~~~~~~~~--------~~~~~L~i~~~~~~d~G~Y~C~~~n 75 (175)
T 1fnl_A 6 PKAVVFLEPQ-WYSVLEKDSVTLKCQG-AYSPEDNSTQWFHNESLIS--------SQASSYFIDAATVNDSGEYRCQTNL 75 (175)
T ss_dssp CCCEEEEESC-CSEEETTCCEEEEEEC-CCBTTBCCCEEEETTEEEE--------SSCSEEEESSCCGGGCEEEEEECSS
T ss_pred CCCEEEEcCC-ceeeeCCCcEEEEeeC-CCCCCCcceEEEECCEEcc--------CCceEEEEeCCCcccCEEEEEEeeC
Confidence 4566666654 3478899999999999 5666554 89999886532 2366899999999999999999988
Q ss_pred CCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCC-eEEEEeCCccCCCcccccccCceeEEEEeecC
Q psy17058 258 SAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMP-TVSWVKYIAPFDRNLERDELTSRAVYTIASVR 336 (471)
Q Consensus 258 ~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 336 (471)
..+ +..+.|.|..++.....+ ...+.+|+.+.|.|.+.+.+++ .+.|++++..+.. ......|.|.+++
T Consensus 76 ~~~--s~~~~l~V~~~~~~~~~~--~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~------~~~~~~L~i~~v~ 145 (175)
T 1fnl_A 76 STL--SDPVQLEVHIGWLLLQAP--RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY------FHHNSDFHIPKAT 145 (175)
T ss_dssp SCC--CCCEEEEEECSSEEEECS--CSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE------EEECCCEEESSCC
T ss_pred Ccc--cccEEEEEeCCCceeeCC--CceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC------CCCCCEEEEcccC
Confidence 544 445667777555443332 3468899999999999987665 9999999887632 2345789999999
Q ss_pred CCCCeEEEEEEEcCCCc-eEEEEEEEEec
Q psy17058 337 ESDAGQYKCIGKNSAGT-EEKVITVAVEH 364 (471)
Q Consensus 337 ~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~ 364 (471)
.+|+|.|+|.|.|..|. .+..+.|.|.+
T Consensus 146 ~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 146 LKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred hhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 99999999999997664 45567787764
No 175
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.85 E-value=3.8e-21 Score=172.27 Aligned_cols=174 Identities=18% Similarity=0.342 Sum_probs=126.2
Q ss_pred CCceeEEcCCeEEEEEEccCC---CCCCeEEEEeCCCCCC------------------------------cCCCceEEe-
Q psy17058 188 NASQTFIVGDRADIQCVLEAG---EPSPTQTWIRPDNDGK------------------------------FGPDVEVYQ- 233 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~---~p~~~v~W~~~~~~~~------------------------------~~~~~~~~~- 233 (471)
.....+.+|+.++|.|.+ .+ .|.+.+.|++++.... ...+..+..
T Consensus 9 ~~~v~v~~G~~v~L~C~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 87 (250)
T 2fbo_J 9 HTEVEVHAGGTVELPCSY-QLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANL 87 (250)
T ss_dssp CSEEEECTTSCEEECCEE-EECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCT
T ss_pred CCceEEecCCeEEEEEEe-EcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccC
Confidence 345678899999999998 44 6778999999875420 111111111
Q ss_pred eeceEEEeccCCCCCeEEEEEEEcCCCce-----EEEEEEEEEeC---CceeeCCCccEEecCCCcEEEEEEEeecCCCe
Q psy17058 234 ELGVLRFNNIATGDEGKYTCIAENSAGKE-----VMNAYIHVLTL---PAVTITPSEYVSVRPGEPLTLECEATGRPMPT 305 (471)
Q Consensus 234 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l~V~~~---p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~ 305 (471)
....|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|..+ |.+.+.......+.+|+.+.|.|.+.+.|.|.
T Consensus 88 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~ 167 (250)
T 2fbo_J 88 AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANAN 167 (250)
T ss_dssp TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCE
T ss_pred CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCe
Confidence 12479999999999999999999876642 45777888764 44555555556788899999999999999999
Q ss_pred EEEEeCCccCCCcc-----------------------cccccCceeEEEEeecCCCCCeEEEEEEEcCCC---ceEEEEE
Q psy17058 306 VSWVKYIAPFDRNL-----------------------ERDELTSRAVYTIASVRESDAGQYKCIGKNSAG---TEEKVIT 359 (471)
Q Consensus 306 i~W~~~~~~~~~~~-----------------------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g---~~~~~~~ 359 (471)
+.|++++..+.... ..........|.|.+++.+|+|.|+|.|.|..| ....++.
T Consensus 168 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~ 247 (250)
T 2fbo_J 168 VTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTI 247 (250)
T ss_dssp EEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEE
T ss_pred eEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEE
Confidence 99999988764311 000011336899999999999999999999555 5555555
Q ss_pred EEE
Q psy17058 360 VAV 362 (471)
Q Consensus 360 l~V 362 (471)
|.|
T Consensus 248 l~V 250 (250)
T 2fbo_J 248 LKV 250 (250)
T ss_dssp EEC
T ss_pred EeC
Confidence 543
No 176
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.85 E-value=7.9e-21 Score=161.76 Aligned_cols=158 Identities=19% Similarity=0.246 Sum_probs=120.8
Q ss_pred ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 178 REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 178 ~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
..+|.+...+. . .+.+|+.++|.|.+ .+ +.+.+.|+|++.. .....+.|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~~P~i~~~p~-~-~v~~G~~v~L~C~~-~~-~~~~~~W~k~g~~--------~~~~~~~L~i~~v~~~D~G~Y~C~a~n 73 (184)
T 2gi7_A 6 LPKPSLQALPS-S-LVPLEKPVTLRCQG-PP-GVDLYRLEKLSSS--------RYQDQAVLFIPAMKRSLAGRYRCSYQN 73 (184)
T ss_dssp BCCCEEEEESC-S-EEETTCCEEEEEEC-ST-TCSEEEEEETTTC--------CEESSSEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeEEeCCC-c-cccCCCcEEEEEeC-CC-CCCEEEEEECCcc--------ccCcccEEEECcCChhhCceEEEEEEc
Confidence 34566666655 2 68899999999998 44 7789999998875 123367899999999999999999999
Q ss_pred CCCc--eEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEE
Q psy17058 258 SAGK--EVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTI 332 (471)
Q Consensus 258 ~~~~--~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i 332 (471)
..+. .+..+.|.|.. +|.+...+ ...+.+|+++.|.|.+.+.| +.+.|++++..+..... .......|.|
T Consensus 74 ~~g~~~~s~~~~l~V~~~~~~p~i~~~p--~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~--~~~~~~~L~i 148 (184)
T 2gi7_A 74 GSLWSLPSDQLELVATGVFAKPSLSAQP--GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNP--ERWYRASFPI 148 (184)
T ss_dssp TTEEBCCCCCEEEEEESSSCCCEEEEEC--CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCC--CEEEEESSSE
T ss_pred CCCccCCCCCEEEEecCcCCCCEEEeCC--CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceec--CCCceEEEEE
Confidence 7653 34456677753 44455544 23577999999999987554 69999999987754221 2345678999
Q ss_pred eecCCCCCeEEEEEEEcCCC
Q psy17058 333 ASVRESDAGQYKCIGKNSAG 352 (471)
Q Consensus 333 ~~~~~~d~G~Y~C~a~n~~g 352 (471)
.+++.+|+|.|+|.|.|..+
T Consensus 149 ~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 149 ITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EEETTCCSEEEEEEEECTTS
T ss_pred ccCCccCCeEEEEEEEeCCC
Confidence 99999999999999999864
No 177
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.85 E-value=5.5e-21 Score=161.51 Aligned_cols=168 Identities=18% Similarity=0.290 Sum_probs=126.3
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
.+|.+...+.. ..+.+|+.++|.|.+ .+.+. ..+.|++++..+.. ....|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~P~i~~~p~~-~~v~~G~~v~L~C~~-~~~~~~~~i~W~~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 3 QKPKVSLNPPW-NRIFKGENVTLTCNG-NNFFEVSSTKWFHNGSLSEE--------TNSSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp -CCCCEEESSC-SEEETTCCEEEECCT-TCC----CCEEEETTEECSC--------CSSEEEECSCCGGGCEEEEEECTT
T ss_pred CCCEEEcCCCC-cceecCCcEEEEEeC-CCCCCcceEEEEECCeECCC--------CceEEEEeccceecCEEEEEEcCC
Confidence 45666666543 578899999999999 55555 47999998876332 267899999999999999999987
Q ss_pred CCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEe-ecCCCeEEEEeCCccCCCcccccccCceeEEEEeecC
Q psy17058 258 SAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEAT-GRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVR 336 (471)
Q Consensus 258 ~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 336 (471)
..+ +..+.|.|..++.....+ ...+.+|+.+.|.|.+. +.|.+.+.|++++..+.. ......|.|.+++
T Consensus 73 ~~~--s~~~~l~V~~~~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~------~~~~~~L~i~~v~ 142 (176)
T 1f2q_A 73 VNE--SEPVYLEVFSDWLLLQAS--AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKY------WYENHNISITNAT 142 (176)
T ss_dssp SSC--CCCEEEEEECSSEEEEES--CSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCS------CCCSSEEEESSCC
T ss_pred ccc--cccEEEEEeCcceeecCC--cceeeCCCCEEEEEEecCCCCceEEEEEECCEEEee------ecCCCeEEECCCC
Confidence 554 344566776544443333 24678999999999995 566679999999987632 2345789999999
Q ss_pred CCCCeEEEEEEEcCCC-ceEEEEEEEEecCC
Q psy17058 337 ESDAGQYKCIGKNSAG-TEEKVITVAVEHRP 366 (471)
Q Consensus 337 ~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p 366 (471)
.+|+|.|+|.|.|..+ ..+..+.|.|..+|
T Consensus 143 ~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 143 VEDSGTYYCTGKVWQLDYESEPLNITVIKAP 173 (176)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEECSC
T ss_pred cccCEEEEEEEEeCCcceEecCEEEEEecCC
Confidence 9999999999999744 34556889998775
No 178
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.85 E-value=1.4e-20 Score=168.31 Aligned_cols=215 Identities=13% Similarity=0.156 Sum_probs=125.4
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCCCCCCC--------CcccCcEEEEcCCCCCCCeEEEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQEQLPP--------NMIAGETLIINGITKADEGVYICSIQ 160 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~~~~--------~~~~~~~L~i~~v~~~D~G~Y~C~~~ 160 (471)
..+|.|...|. ..+.+|++|+|.|....+.+.+.|+|+ +..+.. .......|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~kP~i~~~P~-~~V~~G~~VtL~C~~~~~~~~~~W~k~-g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 5 HRKPSLLAHPG-PLVKSEETVILQCWSDVRFQHFLLHRE-GKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp CCCCEECCBSC-SEEESSCCEEEEEEESSCCSEEEEEEE-STTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CCCCEEEEcCC-CEecCCCCEEEEEecCCCCcEEEEEEC-CCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 35788888776 679999999999993345678999999 443321 11145789999999999999999998
Q ss_pred ecCC----ceeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEE---
Q psy17058 161 NAQG----NVFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVY--- 232 (471)
Q Consensus 161 ~~~~----~~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--- 232 (471)
+... ...+....|.|... .+|.+...+. ..+.+|+.++|.|.+ .+. .+.+.|+|++..+.........
T Consensus 83 ~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~--~~V~~G~~vtL~C~~-~~~-~~~~~w~k~g~~~~~~~~~~~~~~~ 158 (257)
T 1b6u_A 83 VTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG--PTVLAGESVTLSCSS-RSS-YDMYHLSREGEAHERRFSAGPKVNG 158 (257)
T ss_dssp CSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC--TTCBTTCEEEEEEEC-SSC-CSEEEEEETTSSCEECCBCBCCSSS
T ss_pred ccCCCccccccCCCEEEecccCCCCcceEccCC--CccCCCCEEEEEEeC-CCC-CcEEEEEECCcccCcccccccccCC
Confidence 6432 11344456666532 3455555443 357899999999998 443 4689999999875433211111
Q ss_pred eeeceEEEeccCCCCCeEEEEEEEcCCC-----ceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEE
Q psy17058 233 QELGVLRFNNIATGDEGKYTCIAENSAG-----KEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVS 307 (471)
Q Consensus 233 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~ 307 (471)
.....|.|.+++ |+|.|+|.+.+... ..+..+.|.|...|.+...+........|..+.|.|.+ |.+.+.+.
T Consensus 159 ~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~ 235 (257)
T 1b6u_A 159 TFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSETGNPRHLHAAA-EQKLISEE 235 (257)
T ss_dssp CCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC---------------------------------
T ss_pred ceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCcccCccCCCeEEEEEEE-cchHHHHH
Confidence 125679999998 99999999997532 24556788888877665222212245679999999776 46777888
Q ss_pred EEeCC
Q psy17058 308 WVKYI 312 (471)
Q Consensus 308 W~~~~ 312 (471)
|...+
T Consensus 236 ~~~~~ 240 (257)
T 1b6u_A 236 DLNLD 240 (257)
T ss_dssp -----
T ss_pred Hhhhh
Confidence 87543
No 179
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.85 E-value=9.6e-21 Score=159.03 Aligned_cols=165 Identities=18% Similarity=0.284 Sum_probs=124.3
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCC-CCeEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCce
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDP-SATIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNV 166 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p-~~~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 166 (471)
+++|.+.+.|....+.+|+++.|.|. .+.| .+.+.|+++ +..+... ...+.|.+++.+|+|.|+|.+.+....
T Consensus 2 ~p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~-g~~~~~~---~~~~~~~~~~~~d~G~Y~C~~~~~~~s- 76 (170)
T 3ry4_A 2 PPKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHN-GNLIPTH---TQPSYRFKANNNDSGEYTCQTGQTSLS- 76 (170)
T ss_dssp CCBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEET-TEECTTC---CSSEEEEECCGGGCEEEEEEETTSBCC-
T ss_pred CCCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEEC-CeEcccC---ccceEEEecccccCeEEEEEEeCCCce-
Confidence 35688889998889999999999999 6655 679999998 6555442 456788899999999999999875433
Q ss_pred eeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCC
Q psy17058 167 FQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATG 246 (471)
Q Consensus 167 ~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 246 (471)
....+.|. .++.+...+ ...+.+|+.++|.|.+..+.|.+.+.|++++..+.. ......|.|.+++.+
T Consensus 77 --~~~~l~v~--~~~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~------~~~~~~L~i~~v~~~ 144 (170)
T 3ry4_A 77 --DPVHLTVL--FEWLVLQTP--HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF------SHLDPTFSIPQANHS 144 (170)
T ss_dssp --CCEEEEEE--CCSEEEECS--CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE------ESSCCEEEESSCCGG
T ss_pred --EeEEEEEE--CCceEecCC--CceeecCCeEEEEEECCCCCCCceEEEEECCeEccc------cCCCCeEEEEecccc
Confidence 33444544 445443333 346789999999999966667789999998875321 223567999999999
Q ss_pred CCeEEEEEEEcCCCc-eEEEEEEEE
Q psy17058 247 DEGKYTCIAENSAGK-EVMNAYIHV 270 (471)
Q Consensus 247 d~G~Y~C~~~~~~~~-~~~~~~l~V 270 (471)
|+|.|+|.+.|..+. .+..+.|.|
T Consensus 145 d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 145 HSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCEEEEEEEEeCcCccccccEEEEE
Confidence 999999999998875 344455544
No 180
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.85 E-value=3.7e-20 Score=161.82 Aligned_cols=175 Identities=19% Similarity=0.356 Sum_probs=127.0
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCC---eEEEEeCCCCCCcCC------------------CceEE-----eeeceEEEe
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSP---TQTWIRPDNDGKFGP------------------DVEVY-----QELGVLRFN 241 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~---~v~W~~~~~~~~~~~------------------~~~~~-----~~~~~l~i~ 241 (471)
+..+.+.+|++++|.|.+ .+.|.+ .++|+|++..+.... ++.+. ....+|.|.
T Consensus 6 p~~vtv~~G~~v~L~C~v-~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFY-RGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CSEEEEETTSCEEECCEE-CCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCeEEEEcCCCEEEEEEE-EcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 445678899999999999 566554 489999886543211 11110 113469999
Q ss_pred ccCCCCCeEEEEEEEcCCCce-EEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc
Q psy17058 242 NIATGDEGKYTCIAENSAGKE-VMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE 320 (471)
Q Consensus 242 ~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~ 320 (471)
+++.+|+|.|.|.+.+..+.. .....+.+..++...........+..|+.+.+.|.+.|.|.|.+.|++++..+.....
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~ 164 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRS 164 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEE
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCce
Confidence 999999999999998866543 3344455555554444444456778899999999999999999999999887653322
Q ss_pred c---cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 321 R---DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 321 ~---~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
. ......+.|.|..+..+|+|.|+|.|.|+.|..+..+.+.|.
T Consensus 165 ~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 165 FKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred EecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 1 112235689999999999999999999999988766666554
No 181
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=1.9e-20 Score=159.95 Aligned_cols=176 Identities=15% Similarity=0.142 Sum_probs=126.4
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC-CCceEEeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG-PDVEVYQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
.+|.+...+.. .+.+|+.++|.|.+ .+ +...+.|+|++..+... ...........|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~P~i~~~p~~--~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 78 (188)
T 1oll_A 3 PKPFIWAEPHF--MVPKEKQVTICCQG-NY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRV 78 (188)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEEC-CT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeecCC--cCCCCCCEEEEEec-CC-CCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecC
Confidence 35666666553 68899999999998 33 45789999998753321 1111122356799999999999999999988
Q ss_pred CCCc--eEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEE
Q psy17058 258 SAGK--EVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTI 332 (471)
Q Consensus 258 ~~~~--~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i 332 (471)
..+. .+..+.|.|.. +|.+...+ ...+.+|++++|.|.+.+ +.+.+.|+|++..+.... ........|.|
T Consensus 79 ~~~~~~~s~~~~l~V~~~~~~p~i~~~p--~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~--~~~~~~~~L~I 153 (188)
T 1oll_A 79 GELWSEPSNLLDLVVTEMYDTPTLSVHP--GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQR--GYGKVQAEFPL 153 (188)
T ss_dssp TTEECCCCCCEEEEEESCSCCCEEEEES--CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEEE--EECSSEEEEEE
T ss_pred CCCCCCCCCceEEEecccCCCCeEEECC--CCccccCCEEEEEEEcCC-CCCEEEEEECCccccccc--cCCCceeEEEE
Confidence 6442 34556777764 45555444 246789999999999875 456999999998765321 23456789999
Q ss_pred eecCCCCCeEEEEEEEcCCC---ceEEEEEEEEe
Q psy17058 333 ASVRESDAGQYKCIGKNSAG---TEEKVITVAVE 363 (471)
Q Consensus 333 ~~~~~~d~G~Y~C~a~n~~g---~~~~~~~l~V~ 363 (471)
.+++.+|+|.|+|.|.|... ..+..+.|.|.
T Consensus 154 ~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 154 GPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred CCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 99999999999999998652 23445666664
No 182
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.84 E-value=2.2e-20 Score=161.56 Aligned_cols=172 Identities=17% Similarity=0.214 Sum_probs=119.2
Q ss_pred cEEEcCCceeecCCCcEEEEee-CCCCC-----CeEEEEeCCCCCCCC--Ccc--------cCcEEEEcCCCCCCCeEEE
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECK-SNDPS-----ATIKWSKDNQEQLPP--NMI--------AGETLIINGITKADEGVYI 156 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~-~~~p~-----~~v~W~~~~~~~~~~--~~~--------~~~~L~i~~v~~~D~G~Y~ 156 (471)
.+...+..+.+.+|+++.|.|. .+.|. +.+.|++.++..... +.. ....|.|.+++.+|+|.|+
T Consensus 4 ~v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 83 (202)
T 3bp6_B 4 TVTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYR 83 (202)
T ss_dssp CEECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEE
T ss_pred EEecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEE
Confidence 3444556788999999999999 67665 789999942433221 111 2368999999999999999
Q ss_pred EEEEecCCceeeeeEEEEEeecc-CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEee-
Q psy17058 157 CSIQNAQGNVFQDYASIQVDKRE-MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQE- 234 (471)
Q Consensus 157 C~~~~~~~~~~~~~~~l~v~~~~-~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~- 234 (471)
|.+.+..+. ......|.|.... .|.+.. ..+.+|+.++|.|.+ .+.|.+.+.|++++..+.. .......
T Consensus 84 C~~~~~~~~-~~~~~~l~V~~~~~~p~~~~-----~~~~~g~~v~l~C~~-~g~P~p~v~W~~~~~~~~~--~~~~~~~~ 154 (202)
T 3bp6_B 84 CLVICGAAW-DYKYLTVKVKASYMRIDTRI-----LEVPGTGEVQLTCQA-RGYPLAEVSWQNVSVPANT--SHIRTPEG 154 (202)
T ss_dssp EEEEETTEE-EEEEEEEEEEBCCCCEEEEE-----EECTTTCCEEEEEEE-EEBSCCEEEETTCCSCCEE--EEEECTTS
T ss_pred EEEEeCCCc-ceEEEEEEecCCCCcccEEE-----EecCCCCeEEEEEEc-cccCCceEEEEeCCCCccC--ceeeCCCC
Confidence 999998765 4445555554321 122211 134579999999999 7799999999998775321 1111111
Q ss_pred -eceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeC
Q psy17058 235 -LGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTL 273 (471)
Q Consensus 235 -~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~ 273 (471)
...+.|..+...|.|.|+|.|.|..+.....+.|.|..+
T Consensus 155 ~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 155 LYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp CEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred CEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 134667789999999999999999999888888777543
No 183
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.84 E-value=3.3e-20 Score=155.73 Aligned_cols=163 Identities=20% Similarity=0.304 Sum_probs=123.7
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcC
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
.|.+.+.+. ...+.+|+.++|.|.+ .+.| .+.+.|++++..+... ...+.|.+++.+|+|.|+|.+.+.
T Consensus 4 ~p~i~~~p~-~~~v~~G~~v~l~C~~-~~~p~~~~~~W~~~g~~~~~~--------~~~~~~~~~~~~d~G~Y~C~~~~~ 73 (170)
T 3ry4_A 4 KAVLKLEPP-WINVLQEDSVTLTCQG-ARSPESDSIQWFHNGNLIPTH--------TQPSYRFKANNNDSGEYTCQTGQT 73 (170)
T ss_dssp BCEEEEESC-CSEEETTCEEEEEEES-CCCSSSSCEEEEETTEECTTC--------CSSEEEEECCGGGCEEEEEEETTS
T ss_pred CCEEEeCCC-CeEEECCCcEEEEEEe-cCCCCcceEEEEECCeEcccC--------ccceEEEecccccCeEEEEEEeCC
Confidence 345555544 3468899999999999 5555 6799999998764432 345677889999999999999864
Q ss_pred CCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCCCeEEEEeCCccCCCcccccccCceeEEEEeecCC
Q psy17058 259 AGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRE 337 (471)
Q Consensus 259 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 337 (471)
. .+..+.|.|..++.+...+ ...+.+|+.+.|.|.+.+ .|.+.+.|++++..+.. ......|.|.+++.
T Consensus 74 ~--~s~~~~l~v~~~~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~------~~~~~~L~i~~v~~ 143 (170)
T 3ry4_A 74 S--LSDPVHLTVLFEWLVLQTP--HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF------SHLDPTFSIPQANH 143 (170)
T ss_dssp B--CCCCEEEEEECCSEEEECS--CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE------ESSCCEEEESSCCG
T ss_pred C--ceEeEEEEEECCceEecCC--CceeecCCeEEEEEECCCCCCCceEEEEECCeEccc------cCCCCeEEEEeccc
Confidence 3 3345677887766554443 346889999999999954 56689999999877532 23456899999999
Q ss_pred CCCeEEEEEEEcCCCc-eEEEEEEEE
Q psy17058 338 SDAGQYKCIGKNSAGT-EEKVITVAV 362 (471)
Q Consensus 338 ~d~G~Y~C~a~n~~g~-~~~~~~l~V 362 (471)
+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 144 ~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 144 SHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCCEEEEEEEEeCcCccccccEEEEE
Confidence 9999999999999986 355566665
No 184
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.84 E-value=2.8e-20 Score=158.36 Aligned_cols=159 Identities=16% Similarity=0.213 Sum_probs=124.5
Q ss_pred ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc--------------CCCceEEe-----eeceEEEeccCCCCCeE
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF--------------GPDVEVYQ-----ELGVLRFNNIATGDEGK 250 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~--------------~~~~~~~~-----~~~~l~i~~~~~~d~G~ 250 (471)
...+.+|+.++|.|.+ .+.|.+.+.|++++..... ..+..... ....|.|.+++.+|+|.
T Consensus 4 ~v~~~~G~~v~L~C~~-~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTA-SQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp EEEEETTSCEEECCBC-SSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred cEEEeCCCCEEEEEEE-cCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 3467899999999999 5788899999998864221 11222211 13359999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEE
Q psy17058 251 YTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVY 330 (471)
Q Consensus 251 Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l 330 (471)
|+|.+.+.. ..+.|.|.. +...+ ...+.+|+++.|.|.+.+.|.+.+.|++++..+ ......|
T Consensus 83 Y~C~~~~~~----~~~~l~V~~---~~~~~--~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~--------~~~~~~L 145 (184)
T 2ny1_B 83 YICEVEDQK----EEVQLLVFG---LTANS--DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN--------IQGGKTL 145 (184)
T ss_dssp EEEEETTEE----EEEEEEEEE---EEESS--CSEEETTCCEEEEEECCTTCCCEEEEECTTSCE--------EEESSEE
T ss_pred EEEEEEcCC----CcEEEEEEE---ecCCC--CceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc--------ccCceEE
Confidence 999997653 355566653 22222 347789999999999999999999999987654 2356789
Q ss_pred EEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 331 TIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 331 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
.|.+++.+|+|.|+|.|.|..+..+..+.|.|.+.|
T Consensus 146 ~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 146 SVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred EEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecC
Confidence 999999999999999999999999999999998875
No 185
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.84 E-value=1.9e-20 Score=167.72 Aligned_cols=175 Identities=14% Similarity=0.203 Sum_probs=122.8
Q ss_pred EEEcCCceeecCCCcEEEEee-CC---CCCCeEEEEeCCCCC-------------------------------CCCCcc-
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SN---DPSATIKWSKDNQEQ-------------------------------LPPNMI- 137 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~---~p~~~v~W~~~~~~~-------------------------------~~~~~~- 137 (471)
+...+..+.+.+|++++|.|. .+ .+.+.+.|++++... ...+..
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 444456788999999999999 54 778899999984321 001111
Q ss_pred ---cCcEEEEcCCCCCCCeEEEEEEEecCCce----eeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCC
Q psy17058 138 ---AGETLIINGITKADEGVYICSIQNAQGNV----FQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGE 209 (471)
Q Consensus 138 ---~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~----~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~ 209 (471)
....|.|.+++.+|+|.|+|.+.+..+.. ......|.|... .+|.+.+.......+.+|+.++|.|.+ .+.
T Consensus 85 ~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~-~g~ 163 (250)
T 2fbo_J 85 ANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPC-TDC 163 (250)
T ss_dssp SCTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCE-ESC
T ss_pred ccCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEe-cCC
Confidence 13589999999999999999999876641 123455555432 134555555555566789999999999 777
Q ss_pred CCCeEEEEeCCCCCCcCCC----------------------ceEE-eeeceEEEeccCCCCCeEEEEEEEcCCCc---eE
Q psy17058 210 PSPTQTWIRPDNDGKFGPD----------------------VEVY-QELGVLRFNNIATGDEGKYTCIAENSAGK---EV 263 (471)
Q Consensus 210 p~~~v~W~~~~~~~~~~~~----------------------~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~ 263 (471)
|.+.+.|++++..+..... .... .....|.|.+++.+|+|.|+|.|.|..|. ..
T Consensus 164 p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~ 243 (250)
T 2fbo_J 164 ANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADR 243 (250)
T ss_dssp TTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEE
T ss_pred CCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccc
Confidence 8889999999876544221 1111 12368999999999999999999996554 44
Q ss_pred EEEEEE
Q psy17058 264 MNAYIH 269 (471)
Q Consensus 264 ~~~~l~ 269 (471)
.++.|.
T Consensus 244 ~~~~l~ 249 (250)
T 2fbo_J 244 SSTILK 249 (250)
T ss_dssp EEEEEE
T ss_pred eeEEEe
Confidence 444443
No 186
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=4.9e-20 Score=163.60 Aligned_cols=176 Identities=15% Similarity=0.236 Sum_probs=126.4
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCCCCCC----C--CcccCcEEEEcCCCCCCCeEEEEEEEec
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQEQLP----P--NMIAGETLIINGITKADEGVYICSIQNA 162 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~~~----~--~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 162 (471)
..+|.|.+.|.. .+.+|++|+|.|....+...+.|+|+ +..+. . .......|.|.+++.+|+|.|+|.+.+.
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~~~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGNYGAVEYQLHFE-GSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCTTCCEEEEEET-TEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeCCCCcEEEEEEC-CCccccccccccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 467889999877 89999999999994345578999999 43321 1 1114568999999999999999999875
Q ss_pred CCc-eeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEE
Q psy17058 163 QGN-VFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRF 240 (471)
Q Consensus 163 ~~~-~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i 240 (471)
.+. ..+....|.|... ..|.+...+ ...+.+|+.++|.|.+ .+ +.+.+.|+|++..+.. ..........|.|
T Consensus 83 ~~~s~~S~~~~L~V~~~~~~P~i~~~p--~~~v~~G~~vtL~C~~-~~-~~~~~~w~k~g~~~~~--~~~~~~~~~~l~I 156 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTEMYDTPTLSVHP--GPEVISGEKVTFYCRL-DT-ATSMFLLLKEGRSSHV--QRGYGKVQAEFPL 156 (242)
T ss_dssp TEECCCCCCEEEEEECCSCCCEEEEES--CSEEETTCEEEEEEEC-TT-SCSEEEEEECSSSCEE--EEEECSSEEEEEE
T ss_pred CccccCCcceEEEeecccCCCceEccC--CCccCCCCcEEEEEec-CC-CCCEEEEEECCCccCc--cccCCCceEEEEe
Confidence 332 1233455556532 246555544 2368899999999998 33 3469999999876443 1112233568999
Q ss_pred eccCCCCCeEEEEEEEcCC---CceEEEEEEEEEe
Q psy17058 241 NNIATGDEGKYTCIAENSA---GKEVMNAYIHVLT 272 (471)
Q Consensus 241 ~~~~~~d~G~Y~C~~~~~~---~~~~~~~~l~V~~ 272 (471)
.+++.+|+|.|+|.+.|.. ...+..+.|.|..
T Consensus 157 ~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 157 GPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp EECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred CCCccccCEEEEEEEECCCCcccCCCCCEEEEEec
Confidence 9999999999999998864 2345567777775
No 187
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.84 E-value=9.9e-20 Score=160.48 Aligned_cols=175 Identities=21% Similarity=0.281 Sum_probs=117.5
Q ss_pred CCCceeEEcCCeEEEEEEccCCCCC---CeEEEEeCCCCCCc-----------------CCCceEE-----eeeceEEEe
Q psy17058 187 PNASQTFIVGDRADIQCVLEAGEPS---PTQTWIRPDNDGKF-----------------GPDVEVY-----QELGVLRFN 241 (471)
Q Consensus 187 ~~~~~~v~~g~~~~L~C~~~~~~p~---~~v~W~~~~~~~~~-----------------~~~~~~~-----~~~~~l~i~ 241 (471)
|...+.+.+|++++|.|.+ .+.+. ..++|+|++..... ..+.... .....|.|.
T Consensus 10 P~~pV~v~~G~~v~L~C~v-~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 88 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHL-FPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIH 88 (226)
T ss_dssp CSSCEEEETTSCEEEEEEE-ESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEES
T ss_pred CCCCEEEEcCCcEEEEEEE-ECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEe
Confidence 3445678899999999998 44433 37999998754210 0111111 113479999
Q ss_pred ccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCCCeEEEEeCCcc-CCCcc
Q psy17058 242 NIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPMPTVSWVKYIAP-FDRNL 319 (471)
Q Consensus 242 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~~i~W~~~~~~-~~~~~ 319 (471)
+++.+|+|.|+|.+.|..+.....+.+.+...+... .....+.+|+.+.|.|.+.| .|.|.++|++++.. +....
T Consensus 89 ~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~---~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~ 165 (226)
T 4f80_A 89 NVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDL---HVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVE 165 (226)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCC---EEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEE
T ss_pred eCchHHCeeEEEEEECCCcEEEEEEEEeeccceecc---cceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCc
Confidence 999999999999999987766665555554332221 22346778999999999988 59999999996544 33221
Q ss_pred ccccc---CceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecC
Q psy17058 320 ERDEL---TSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 320 ~~~~~---~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 365 (471)
..... .....+.+..++.+|+|.|+|.|.|..|..++++.|.|.++
T Consensus 166 ~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 166 APVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp CCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred eEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 11111 11234455567889999999999999999999999988653
No 188
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.84 E-value=6.5e-20 Score=166.10 Aligned_cols=193 Identities=17% Similarity=0.293 Sum_probs=121.8
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-C---CCCCCeEEEEeCCCCCCCC-------------------Cc-------ccCc
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-S---NDPSATIKWSKDNQEQLPP-------------------NM-------IAGE 140 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~---~~p~~~v~W~~~~~~~~~~-------------------~~-------~~~~ 140 (471)
.+.+.+.|..+.+.+|++++|.|. . +.+.+.+.|+++++..... +. ..+.
T Consensus 5 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 5 LPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred ccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence 356677788899999999999999 4 5677789999974322111 11 1237
Q ss_pred EEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEc--cCCCCCCeEEEEe
Q psy17058 141 TLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVL--EAGEPSPTQTWIR 218 (471)
Q Consensus 141 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~--~~~~p~~~v~W~~ 218 (471)
+|.|.+++.+|+|.|+|.+.+..+. ......+.|.+.. ..+....+.+|+.++|.|.+ ..+.|.+.+.|++
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~-~~~~~~~~l~V~~------~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~ 157 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNES-MVMKKPVELWVLP------EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMF 157 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCC-CEEEEEEEEEEEC------CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEE
T ss_pred EEEECCCCHhHCEEEEEEEEecCCc-ceEEEEEEEEEec------cCCCccccccCCcEEEEEEecCCCCCCccceEEEe
Confidence 8999999999999999999987554 3333444444321 12234568899999999998 3566889999999
Q ss_pred CCCCCCc----------------------CCCceE----EeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEe
Q psy17058 219 PDNDGKF----------------------GPDVEV----YQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLT 272 (471)
Q Consensus 219 ~~~~~~~----------------------~~~~~~----~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~ 272 (471)
++..... ..+..+ ......|.|.+++.+|+|.|+|.|.|..+.....+.|.|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 237 (268)
T 3mj6_A 158 SSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ 237 (268)
T ss_dssp ECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc
Confidence 5443111 011111 12256799999999999999999999888888889999854
Q ss_pred C-CceeeCCCccEEecCCCc
Q psy17058 273 L-PAVTITPSEYVSVRPGEP 291 (471)
Q Consensus 273 ~-p~~~~~~~~~~~~~~g~~ 291 (471)
. |.+.+.| ....+.+|+.
T Consensus 238 ~~p~~~~~p-~~~~~~~~q~ 256 (268)
T 3mj6_A 238 DEFQRTISP-TPPTDKGQQG 256 (268)
T ss_dssp C-------------------
T ss_pred CCCeeeeCC-CCCCCCccee
Confidence 4 4444443 3344444443
No 189
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.84 E-value=2.9e-20 Score=168.47 Aligned_cols=170 Identities=19% Similarity=0.336 Sum_probs=122.6
Q ss_pred ceeEEcCCeEEEEEEccC--CCCCCeEEEEeCCCCCCcC------------------CCceEE----eeeceEEEeccCC
Q psy17058 190 SQTFIVGDRADIQCVLEA--GEPSPTQTWIRPDNDGKFG------------------PDVEVY----QELGVLRFNNIAT 245 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~--~~p~~~v~W~~~~~~~~~~------------------~~~~~~----~~~~~l~i~~~~~ 245 (471)
...+.+|+.++|.|.+.. +.+.+.+.|++++...... .+..+. ..+..|.|.+++.
T Consensus 14 ~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 93 (268)
T 3mj6_A 14 QLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQK 93 (268)
T ss_dssp EEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCG
T ss_pred ceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCH
Confidence 457889999999999831 4666789999976542211 222221 1126799999999
Q ss_pred CCCeEEEEEEEcCCCce--EEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEE---eecCCCeEEEEeCCccC-CCcc
Q psy17058 246 GDEGKYTCIAENSAGKE--VMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEA---TGRPMPTVSWVKYIAPF-DRNL 319 (471)
Q Consensus 246 ~d~G~Y~C~~~~~~~~~--~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~---~g~p~~~i~W~~~~~~~-~~~~ 319 (471)
+|+|.|+|.+.+..+.. ...+.|.|. +. .+....+.+|+++.|.|.+ .+.|.+.+.|++++... ....
T Consensus 94 ~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~~----~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~ 167 (268)
T 3mj6_A 94 ADEGIYTCEIRLKNESMVMKKPVELWVL--PE----EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEET 167 (268)
T ss_dssp GGCEEEEEEEEETTCCCEEEEEEEEEEE--CC----CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEE
T ss_pred hHCEEEEEEEEecCCcceEEEEEEEEEe--cc----CCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCccee
Confidence 99999999999876554 344555553 21 2235678899999999999 56688899999953321 1000
Q ss_pred -------------------------cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecC
Q psy17058 320 -------------------------ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 320 -------------------------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 365 (471)
.........+|.|.+++.+|+|.|+|.|.|..|.....+.|.|...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 238 (268)
T 3mj6_A 168 VLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQD 238 (268)
T ss_dssp EEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcC
Confidence 0001234678999999999999999999999999999999999765
No 190
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=5.7e-20 Score=164.39 Aligned_cols=216 Identities=16% Similarity=0.207 Sum_probs=125.5
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC---CceEEeeeceEEEeccCCCCCeEEEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP---DVEVYQELGVLRFNNIATGDEGKYTCIA 255 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~---~~~~~~~~~~l~i~~~~~~d~G~Y~C~~ 255 (471)
.+|.+...+. ..+.+|+.++|.|.+ . .+...+.|+|++..+.... ..........|.|.+++.+|+|.|+|.+
T Consensus 6 ~kP~i~~~P~--~~V~~G~~VtL~C~~-~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 81 (257)
T 1b6u_A 6 RKPSLLAHPG--PLVKSEETVILQCWS-D-VRFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYG 81 (257)
T ss_dssp CCCEECCBSC--SEEESSCCEEEEEEE-S-SCCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEE
T ss_pred CCCEEEEcCC--CEecCCCCEEEEEec-C-CCCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeE
Confidence 3455555443 468899999999998 3 3567999999988643111 0001122567999999999999999999
Q ss_pred EcCCC-----ceEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccccc---cc
Q psy17058 256 ENSAG-----KEVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERD---EL 324 (471)
Q Consensus 256 ~~~~~-----~~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~---~~ 324 (471)
.+... ..+..+.|.|.. +|.+...+. ..+.+|++++|.|.+.+. .+.|.|+|++..+....... ..
T Consensus 82 ~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~--~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~ 158 (257)
T 1b6u_A 82 SVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG--PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVNG 158 (257)
T ss_dssp ECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC--TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSSS
T ss_pred eccCCCccccccCCCEEEecccCCCCcceEccCC--CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccCC
Confidence 86421 235567777775 345555443 257899999999999865 46999999998765322111 11
Q ss_pred CceeEEEEeecCCCCCeEEEEEEEcCCC-----ceEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEE
Q psy17058 325 TSRAVYTIASVRESDAGQYKCIGKNSAG-----TEEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYA 399 (471)
Q Consensus 325 ~~~~~l~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 399 (471)
.....|.|.+++ |+|.|+|.|.|..+ ..+..+.|.|.+.|
T Consensus 159 ~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p--------------------------------- 203 (257)
T 1b6u_A 159 TFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNP--------------------------------- 203 (257)
T ss_dssp CCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC---------------------------------
T ss_pred ceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccC---------------------------------
Confidence 246899999998 99999999997632 23555788888764
Q ss_pred cCCcceEEeeecCCeeEE-cCCeeeeeCCCeEEEEEEecccCCceEEEecCCC
Q psy17058 400 VGSNASISCSVEPPRITL-RPVRQTVKPGDIANIRCSAIGATPISIRWQPLQG 451 (471)
Q Consensus 400 ~~~~~~y~c~~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~g~ 451 (471)
.+.. .+.......|..+.|.|.+ |.+.+.+.|..-+-
T Consensus 204 --------------~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~~ 241 (257)
T 1b6u_A 204 --------------SNSWPSPTEPSSETGNPRHLHAAA-EQKLISEEDLNLDL 241 (257)
T ss_dssp -----------------------------------------------------
T ss_pred --------------CCCCCCCcccCccCCCeEEEEEEE-cchHHHHHHhhhhh
Confidence 2221 1112334568899999877 88889999987654
No 191
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.84 E-value=1.4e-19 Score=154.09 Aligned_cols=155 Identities=20% Similarity=0.330 Sum_probs=120.1
Q ss_pred ceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCC---------------CCCcc--------cCcEEEEcCCCCCCCeEE
Q psy17058 100 QQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQL---------------PPNMI--------AGETLIINGITKADEGVY 155 (471)
Q Consensus 100 ~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~---------------~~~~~--------~~~~L~i~~v~~~D~G~Y 155 (471)
.+.+.+|++++|.|. .+.|.+.+.|++++...+ ..+.. ...+|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 567899999999999 778889999999943211 11111 245699999999999999
Q ss_pred EEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeee
Q psy17058 156 ICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQEL 235 (471)
Q Consensus 156 ~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 235 (471)
+|.+.+..+ ...+.|.. +.. .....+.+|+.++|.|.+ .+.|.+.+.|++++..+ ....
T Consensus 84 ~C~~~~~~~-----~~~l~V~~-----~~~--~~~~~v~~g~~~~l~C~~-~~~p~~~v~W~~~~~~~--------~~~~ 142 (184)
T 2ny1_B 84 ICEVEDQKE-----EVQLLVFG-----LTA--NSDTHLLQGQSLTLTLES-PPGSSPSVQCRSPRGKN--------IQGG 142 (184)
T ss_dssp EEEETTEEE-----EEEEEEEE-----EEE--SSCSEEETTCCEEEEEEC-CTTCCCEEEEECTTSCE--------EEES
T ss_pred EEEEEcCCC-----cEEEEEEE-----ecC--CCCceeecCCCEEEEEEc-CCCCCCEEEEEeCCCcc--------ccCc
Confidence 999987532 34455541 122 223467899999999999 66799999999987652 2346
Q ss_pred ceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCc
Q psy17058 236 GVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPA 275 (471)
Q Consensus 236 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~ 275 (471)
..|.|.+++.+|+|.|+|.+.|..+..+..+.|.|...|.
T Consensus 143 ~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 143 KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 182 (184)
T ss_dssp SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCC
Confidence 7899999999999999999999888888889999887664
No 192
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.83 E-value=3.6e-19 Score=156.35 Aligned_cols=177 Identities=15% Similarity=0.246 Sum_probs=122.2
Q ss_pred CCCceeEEcCCeEEEEEEccCCCC-----CCeEEEEeCCCCC---------------CcCCCceEEe-----eeceEEEe
Q psy17058 187 PNASQTFIVGDRADIQCVLEAGEP-----SPTQTWIRPDNDG---------------KFGPDVEVYQ-----ELGVLRFN 241 (471)
Q Consensus 187 ~~~~~~v~~g~~~~L~C~~~~~~p-----~~~v~W~~~~~~~---------------~~~~~~~~~~-----~~~~l~i~ 241 (471)
+.....+.+|+.++|.|.+ .+.| ...+.|+|++..+ ....+..+.. ....|.|.
T Consensus 7 p~~~v~~~~G~~v~L~C~~-~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKF-PVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp SCSEEEEETTSCEEEEEEC-CCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred CCccEEEEcCCcEEEEeEe-cCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 3344567899999999998 4444 3489999974110 0112222221 13479999
Q ss_pred ccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeC-CccCCCccc
Q psy17058 242 NIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKY-IAPFDRNLE 320 (471)
Q Consensus 242 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~-~~~~~~~~~ 320 (471)
+++.+|+|.|+|.+.+ .+.....+.|.|..++...... ....+.+|+.+.|.|.+.|+|.|.+.|+++ +..+.....
T Consensus 86 ~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~-~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~ 163 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQR-ILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTT 163 (222)
T ss_dssp SCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEE-EEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEE
T ss_pred CcccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCce-eeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccc
Confidence 9999999999999998 5666777888888665432211 112567899999999999999999999998 554433211
Q ss_pred c-cccCcee---EEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 321 R-DELTSRA---VYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 321 ~-~~~~~~~---~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
. ....... ...+..+..+|.|.|+|.|.|..|....++.|.|...|
T Consensus 164 ~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p 213 (222)
T 3sbw_C 164 TTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELP 213 (222)
T ss_dssp EEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC-
T ss_pred eEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCc
Confidence 1 1111111 22233456789999999999999999999999998765
No 193
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.83 E-value=2.1e-20 Score=157.76 Aligned_cols=156 Identities=15% Similarity=0.153 Sum_probs=116.1
Q ss_pred eeEEcCCeEEEEEEccC-CCCCCeEEEEeCCCCC----------CcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCC
Q psy17058 191 QTFIVGDRADIQCVLEA-GEPSPTQTWIRPDNDG----------KFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSA 259 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~-~~p~~~v~W~~~~~~~----------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~ 259 (471)
+.+.+|+.++|.|.... ..+.+.+.|+|++..+ ....++.+.. ++.|.|.+++.+|+|.|+|.+.|..
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~-~gsL~I~~v~~~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILA-NGDLKIKNLTRDDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECT-TSCEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECC-CCcEEEcccccccCEEEEEEEEeCC
Confidence 35679999999995412 2556789999988432 1233444433 5669999999999999999999988
Q ss_pred Cce--EEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCC
Q psy17058 260 GKE--VMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRE 337 (471)
Q Consensus 260 ~~~--~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 337 (471)
+.. +..+.|.|..++.. | .+ ...+..+.|.|.+.|.|.|.+.|++++..+.... .+.|..+..
T Consensus 85 g~~~~~~~~~l~V~~~~~~---p--~i-~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~---------~~~i~~~~~ 149 (176)
T 1hng_A 85 GTRILNKALDLRILEMVSK---P--MI-YWECSNATLTCEVLEGTDVELKLYQGKEHLRSLR---------QKTMSYQWT 149 (176)
T ss_dssp CCEEEEEEEEEEEECCCCC---C--EE-EEETTTTEEEEECSSCSSCEEEEEETTEEEEEES---------SSEEEEECS
T ss_pred CCEEEEEEEEEEEeCCCCC---C--EE-EecCCcEEEEEEecCCCCcEEEEEECCEECCCCC---------cEEEEEEEc
Confidence 876 66677888764321 1 11 1235569999999999999999999987764221 145667889
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 338 SDAGQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 338 ~d~G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
+|+|.|+|.|.|..|..+....|.+
T Consensus 150 ~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 150 NLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp CCSSCEEEEEEETTEEEEEEECCCC
T ss_pred cCCeEEEEEEEecCCCceecccccC
Confidence 9999999999999999888876654
No 194
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.83 E-value=5.5e-20 Score=165.20 Aligned_cols=201 Identities=19% Similarity=0.310 Sum_probs=119.4
Q ss_pred eEEEEecCcEEEEEEeeeCCccEEEeccchhhhheeeeeeeecCCCCcEEEcCCceeecCCCcEEEEee-CCCC-----C
Q psy17058 46 EVTVYEGGDAELKCNTYYAPGRWMWLNFYSFLSLIIICLAYLSPQANEVQVTPRQQSAPEGSQVTIECK-SNDP-----S 119 (471)
Q Consensus 46 ~~~v~~g~~~~l~C~~~~~~~~~~w~~~~~~~~~~~~c~~~~~~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p-----~ 119 (471)
...|+.++.+.|.|.+.+ .. +.. .+.. ...++.+...|..+.+.+|++++|.|. .+.+ .
T Consensus 8 ~~~v~~~dsg~Y~C~a~g---~~-~~~---~~~~--------~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~ 72 (254)
T 2c1o_A 8 AELVRPGTSVKLSCKASG---YS-FTN---YWMN--------WLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGK 72 (254)
T ss_dssp ---------------------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSC
T ss_pred cceecCCccEEEEEcCch---hh-hhh---hhhh--------eeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCC
Confidence 345889999999999871 11 000 0000 112677888888999999999999999 6666 4
Q ss_pred CeEEEEeCC-CCCC--------------CCCcc-----cCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeec-
Q psy17058 120 ATIKWSKDN-QEQL--------------PPNMI-----AGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKR- 178 (471)
Q Consensus 120 ~~v~W~~~~-~~~~--------------~~~~~-----~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~- 178 (471)
+.+.|+|++ +..+ ..+.. ....|.|.+++.+|+|.|+|.+.|..+........+.|...
T Consensus 73 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~ 152 (254)
T 2c1o_A 73 TYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRAD 152 (254)
T ss_dssp BCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCC
T ss_pred CceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCC
Confidence 899999853 2211 11111 23389999999999999999999876542333345666432
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCcC--CCc-------eEEeeeceEEEeccCCCCC
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKFG--PDV-------EVYQELGVLRFNNIATGDE 248 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~~--~~~-------~~~~~~~~l~i~~~~~~d~ 248 (471)
.+|.+.+.+... ....|+.++|.|.+....|. +.++|+|++..+... ... ......+.|.|.++..+|+
T Consensus 153 ~~P~v~~~~~~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~ 231 (254)
T 2c1o_A 153 AAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERH 231 (254)
T ss_dssp BCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTC
T ss_pred CCCeeEeecCCh-hhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCC
Confidence 246666554433 23368899999999443454 579999998864433 000 0111245799999999999
Q ss_pred eEEEEEEEcCCCce
Q psy17058 249 GKYTCIAENSAGKE 262 (471)
Q Consensus 249 G~Y~C~~~~~~~~~ 262 (471)
|.|+|.|.|.....
T Consensus 232 G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 232 NSYTCEATHKTSTS 245 (254)
T ss_dssp CEEEEEEECTTCSS
T ss_pred CeEEEEEEcCCCCC
Confidence 99999999986553
No 195
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.83 E-value=8.3e-21 Score=178.79 Aligned_cols=177 Identities=19% Similarity=0.242 Sum_probs=137.9
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCC----CcccCcEEEEcCCCCCCCe-EEEEEEEec
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPP----NMIAGETLIINGITKADEG-VYICSIQNA 162 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~----~~~~~~~L~i~~v~~~D~G-~Y~C~~~~~ 162 (471)
..+|.+...|....+.+|+++.|.|. .+.|.+.+.|+++++..... .....+.|.|.+++.+|+| .|+|.+.|.
T Consensus 156 c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~ 235 (347)
T 2ifg_A 156 CGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAEND 235 (347)
T ss_dssp CCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEET
T ss_pred CCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcC
Confidence 35788999999999999999999999 78899999999995432211 1115678999999999999 999999998
Q ss_pred CCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEE---------e
Q psy17058 163 QGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVY---------Q 233 (471)
Q Consensus 163 ~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~---------~ 233 (471)
.+. .. ..+.+.+..+|.+. ...+.+|+.++|.|.+ .+.|.+.++|++++..+......... .
T Consensus 236 ~g~-~~--~~~~l~V~~~P~i~-----~~~~~~g~~v~l~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~ 306 (347)
T 2ifg_A 236 VGR-AE--VSVQVNVSFPASVQ-----LHTAVEMHHWCIPFSV-DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETV 306 (347)
T ss_dssp TEE-CC--EEECCCCBEEEEEE-----ECCCEESSSEEEEEEE-EEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCC
T ss_pred CCC-EE--EEEEEEEcCCCeee-----eccCccCceEEEEEEe-eecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcc
Confidence 766 33 34455545556641 1134579999999999 77899999999998876543332211 1
Q ss_pred eeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCC
Q psy17058 234 ELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLP 274 (471)
Q Consensus 234 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p 274 (471)
..+.|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|
T Consensus 307 ~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 307 RHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred cceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 25679999999999999999999999999888888887654
No 196
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.83 E-value=3e-19 Score=154.31 Aligned_cols=162 Identities=13% Similarity=0.156 Sum_probs=116.1
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCCCCCCCC--------cccCcEEEEcCCCCCCCeEEEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQEQLPPN--------MIAGETLIINGITKADEGVYICSIQ 160 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~~~~~--------~~~~~~L~i~~v~~~D~G~Y~C~~~ 160 (471)
..+|.|...|. ..+.+|++++|.|....+.+.+.|+|+ +..+... ......|.|.+++.+|+|.|+|.+.
T Consensus 6 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~ 83 (201)
T 1nkr_A 6 HRKPSLLAHPG-PLVKSEETVILQCWSDVMFEHFLLHRE-GMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGS 83 (201)
T ss_dssp -CCCEEEEESC-SEEETTCCEEEEEEESSCCSEEEEEEE-SSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEEEcC-CccCCCCcEEEEEeccCCCCEEEEEEC-CCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEe
Confidence 46788888886 779999999999993357789999999 5444211 1145789999999999999999998
Q ss_pred ecCC----ceeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEe--
Q psy17058 161 NAQG----NVFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQ-- 233 (471)
Q Consensus 161 ~~~~----~~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-- 233 (471)
+... ...+....|.|... .+|.+...+. ..+.+|+.++|.|.+ .+ +.+.+.|+|++..+..........
T Consensus 84 ~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~--~~v~~G~~v~L~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~~~ 159 (201)
T 1nkr_A 84 VTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG--PTVLAGENVTLSCSS-RS-SYDMYHLSREGEAHERRLPAGPKVNG 159 (201)
T ss_dssp BTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC--SEECTTCEEEEEEEE-SS-CCSEEEEEETTCSSCEEEECEEEETT
T ss_pred cCCCCccccCCCCCEEEEeeccCCCCceecCCC--CccCCCCeEEEEEeC-CC-CCceEEEEECCcccCcccccccccCC
Confidence 6421 11334456666532 3456655543 367899999999998 33 567999999988754322111111
Q ss_pred -eeceEEEeccCCCCCeEEEEEEEcC
Q psy17058 234 -ELGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 234 -~~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
....|.|.+++ |+|.|+|.+.+.
T Consensus 160 ~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 160 TFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EEEEEEEEEECC--SCEEEEEEEEET
T ss_pred ceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 25679999998 999999999865
No 197
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.83 E-value=8.3e-20 Score=159.37 Aligned_cols=169 Identities=21% Similarity=0.412 Sum_probs=119.4
Q ss_pred cEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCC-CCC--------------CCCcc-----cCcEEEEcCCCCCC
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQ-EQL--------------PPNMI-----AGETLIINGITKAD 151 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~-~~~--------------~~~~~-----~~~~L~i~~v~~~D 151 (471)
.+...|..+.+.+|+++.|.|. .+.|.+.+.|+|++. ..+ ..+.. ....|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3d9a_L 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhh
Confidence 4556678889999999999999 777788999998632 111 11111 23489999999999
Q ss_pred CeEEEEEEEecCCceeeeeEEEEEeecc-CCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCCCcC-CC
Q psy17058 152 EGVYICSIQNAQGNVFQDYASIQVDKRE-MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDGKFG-PD 228 (471)
Q Consensus 152 ~G~Y~C~~~~~~~~~~~~~~~l~v~~~~-~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~~~~-~~ 228 (471)
+|.|+|.+.+..+........+.|.... +|.+.+.+... .+..|+.++|.|.+....|.+ .++|++++..+... ..
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~-~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 161 (213)
T 3d9a_L 83 FGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN 161 (213)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEE
T ss_pred CEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCCh-hhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeee
Confidence 9999999998766533334466665322 56666544433 234799999999994436665 89999998764433 00
Q ss_pred -c-------eEEeeeceEEEeccCCCCCeEEEEEEEcCCCce
Q psy17058 229 -V-------EVYQELGVLRFNNIATGDEGKYTCIAENSAGKE 262 (471)
Q Consensus 229 -~-------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 262 (471)
. ......+.|.|.++..+|+|.|+|.|.|.....
T Consensus 162 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 162 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred cCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 0 011124589999999999999999999986654
No 198
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=1e-19 Score=161.55 Aligned_cols=179 Identities=15% Similarity=0.141 Sum_probs=128.8
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC-CCceEEeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG-PDVEVYQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
.+|.+...+.. .+.+|+.++|.|.+ .+ +...+.|+|++..+... ...........|.|.+++.+|+|.|+|.+.+
T Consensus 6 ~kP~i~~~P~~--~v~~G~~VtL~C~~-~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 81 (242)
T 1p6f_A 6 PKPFIWAEPHF--MVPKEKQVTICCQG-NY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRV 81 (242)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEEC-CT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeeCCC--ccCCCCcEEEEEee-CC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEec
Confidence 45666666653 68899999999998 33 45689999998653211 1111112356799999999999999999987
Q ss_pred CCCc--eEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEE
Q psy17058 258 SAGK--EVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTI 332 (471)
Q Consensus 258 ~~~~--~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i 332 (471)
..+. .+..+.|.|.. +|.+...+. ..+.+|++++|.|.+.+. .+.+.|+|+|..+.... ........|.|
T Consensus 82 ~~~~s~~S~~~~L~V~~~~~~P~i~~~p~--~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~--~~~~~~~~l~I 156 (242)
T 1p6f_A 82 GELWSEPSNLLDLVVTEMYDTPTLSVHPG--PEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQR--GYGKVQAEFPL 156 (242)
T ss_dssp TTEECCCCCCEEEEEECCSCCCEEEEESC--SEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEEE--EECSSEEEEEE
T ss_pred CCccccCCcceEEEeecccCCCceEccCC--CccCCCCcEEEEEecCCC-CCEEEEEECCCccCccc--cCCCceEEEEe
Confidence 6432 34556777764 455555442 367899999999998754 46999999998765321 23456789999
Q ss_pred eecCCCCCeEEEEEEEcCC---CceEEEEEEEEecCC
Q psy17058 333 ASVRESDAGQYKCIGKNSA---GTEEKVITVAVEHRP 366 (471)
Q Consensus 333 ~~~~~~d~G~Y~C~a~n~~---g~~~~~~~l~V~~~p 366 (471)
.+++.+|+|.|+|.|.|.. ...+..+.|.|...+
T Consensus 157 ~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 157 GPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp EECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC--
T ss_pred CCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccC
Confidence 9999999999999999864 234566888888754
No 199
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.82 E-value=9.2e-20 Score=159.09 Aligned_cols=168 Identities=18% Similarity=0.289 Sum_probs=123.4
Q ss_pred ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCC--CCC------------cCCCceEEe--eeceEEEeccCCCCCeEEEE
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDN--DGK------------FGPDVEVYQ--ELGVLRFNNIATGDEGKYTC 253 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~--~~~------------~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C 253 (471)
...+.+|+.++|.|.+ .+.|.+.+.|+|... ... ...++.+.. ....|.|.+++.+|+|.|+|
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (213)
T 3mj8_L 9 LVSVALGQKATITCSG-DKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYC 87 (213)
T ss_dssp EEEEETTSCEEEEEEC-SSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred cEEEeCCCCEEEEEEc-CCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEE
Confidence 5678899999999999 678889999998422 111 122333222 24469999999999999999
Q ss_pred EEEcCCC---ceEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEeec-CC-CeEEEEeCCccCCCcc-----
Q psy17058 254 IAENSAG---KEVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATGR-PM-PTVSWVKYIAPFDRNL----- 319 (471)
Q Consensus 254 ~~~~~~~---~~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~i~W~~~~~~~~~~~----- 319 (471)
.+.+..+ .....+.|.|. .+|.+.+.+.. ..+.+|+.+.|.|.+.|. |+ +.+.|++++..+....
T Consensus 88 ~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 166 (213)
T 3mj8_L 88 QSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPS-SEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQP 166 (213)
T ss_dssp EEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCC
T ss_pred EeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCC-cccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCc
Confidence 9999877 34555778888 56666665432 234489999999999985 44 3999999998875321
Q ss_pred --cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 320 --ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVIT 359 (471)
Q Consensus 320 --~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 359 (471)
........+.|.|..+..+|+|.|+|.|.|..+...+++.
T Consensus 167 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 167 SKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp EEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred CccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 1111223466999999999999999999999887766654
No 200
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.82 E-value=7.3e-20 Score=161.80 Aligned_cols=174 Identities=17% Similarity=0.362 Sum_probs=124.5
Q ss_pred CCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCC-------------cCCCce----------EEeeeceEEEec
Q psy17058 187 PNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGK-------------FGPDVE----------VYQELGVLRFNN 242 (471)
Q Consensus 187 ~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~-------------~~~~~~----------~~~~~~~l~i~~ 242 (471)
.+....+.+|+.++|.|.+ .+.+. +.+.|++++.... ...+.. +.. .+.|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~-~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~L~i~~ 83 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTP-TGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDS-QGRLVLAE 83 (231)
T ss_dssp CCSEEEEETTCCEEECCCC-BSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECT-TCCEEESS
T ss_pred CCCcEEEEcCCCEEEeccc-CCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCC-CceEEEcc
Confidence 3445678899999999999 66664 8999998776522 011222 222 34599999
Q ss_pred cCCCCCeEEEEEEEcCC-CceEEEEEEEEEeCCce---eeCCCccEEecCCCcE-EEEEEE-eecCCCeEEEEeCCccCC
Q psy17058 243 IATGDEGKYTCIAENSA-GKEVMNAYIHVLTLPAV---TITPSEYVSVRPGEPL-TLECEA-TGRPMPTVSWVKYIAPFD 316 (471)
Q Consensus 243 ~~~~d~G~Y~C~~~~~~-~~~~~~~~l~V~~~p~~---~~~~~~~~~~~~g~~v-~l~C~~-~g~p~~~i~W~~~~~~~~ 316 (471)
++.+|+|.|+|.+.+.. +.....+.|.|..+|.. ...+ ....+.+|+.+ .|.|.+ .+.|.+.+.|++++..+.
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~-~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~ 162 (231)
T 2pet_A 84 AQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNK-GTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLE 162 (231)
T ss_dssp CCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECC-SSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECC
T ss_pred cCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCC-cceeecCCCceEEEEEEeECcccCCEEEEEECCccCc
Confidence 99999999999999986 77788889999877542 2222 23456789988 999999 889999999999998876
Q ss_pred Ccc----cccc-----------cCceeEEEEeecCCCCCeEEEEEEEc-----CCCc-eEEEEEEEEe
Q psy17058 317 RNL----ERDE-----------LTSRAVYTIASVRESDAGQYKCIGKN-----SAGT-EEKVITVAVE 363 (471)
Q Consensus 317 ~~~----~~~~-----------~~~~~~l~i~~~~~~d~G~Y~C~a~n-----~~g~-~~~~~~l~V~ 363 (471)
... .... ....+.|.|.....+|.|.|+|.|.| ..|. .+..+.|.|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V~ 230 (231)
T 2pet_A 163 VPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTLH 230 (231)
T ss_dssp CCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCCC
T ss_pred cccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEEe
Confidence 433 1000 00126688886666679999999999 4444 4455555553
No 201
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.82 E-value=2.4e-20 Score=158.98 Aligned_cols=145 Identities=15% Similarity=0.273 Sum_probs=108.8
Q ss_pred eEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEec-cCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 192 TFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNN-IATGDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 192 ~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
...+|+.++|.|.+ .+ + +.++|+|++..+... .++.|.|.+ ++.+|+|.|+|.+.|..+.....+.+.|
T Consensus 10 v~~~G~~v~L~C~~-~~-~-~~i~W~k~g~~l~~~-------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v 79 (186)
T 1jbj_A 10 VSISGTSVELTCPL-DS-D-ENLKWEKNGQELPQK-------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARV 79 (186)
T ss_dssp EEEETTEEEEECSS-CC-C-TTCEEEETTEEECSC-------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCC
T ss_pred EEeCCcEEEEEEeC-CC-C-CceEEEECCEECCCC-------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 45689999999998 44 3 349999998764432 256799999 9999999999999998887655555554
Q ss_pred EeCCceee--------------------CC-Ccc---EEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCc
Q psy17058 271 LTLPAVTI--------------------TP-SEY---VSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTS 326 (471)
Q Consensus 271 ~~~p~~~~--------------------~~-~~~---~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~ 326 (471)
...+.... .+ ... ..+.+|+++.|.|.+ |.|.+.|+|++..+.... ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~-----~~ 151 (186)
T 1jbj_A 80 GSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLN-----AT 151 (186)
T ss_dssp CSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSS-----CC
T ss_pred ecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccC-----CC
Confidence 32211100 00 000 123489999999998 888999999999875322 25
Q ss_pred eeEEEEeecCCCCCeEEEEEEEcCCCce
Q psy17058 327 RAVYTIASVRESDAGQYKCIGKNSAGTE 354 (471)
Q Consensus 327 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 354 (471)
...|.|.++..+|+|.|+|.|.|..|..
T Consensus 152 ~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 152 KNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred cceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 6789999999999999999999998876
No 202
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.82 E-value=1.4e-19 Score=163.69 Aligned_cols=222 Identities=15% Similarity=0.219 Sum_probs=110.0
Q ss_pred ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc-CCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF-GPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYI 268 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 268 (471)
...+.+|++++|.|.+ ....+..+.|.-.-..... .... ....+.|.++..+ |.|+|++.......+..+.|
T Consensus 8 ~~~V~~G~sv~l~Cs~-~c~~p~~~~~~t~l~~~~~~~~g~----~~~~~~l~~v~~~--~~y~C~~~~~~~~~~~~v~l 80 (291)
T 1mq8_A 8 KVILPRGGSVLVTCST-SCDQPKLLGIETPLPKKELLLPGN----NRKVYELSNVQED--SQPMCYSNCPDGQSTAKTFL 80 (291)
T ss_dssp EEEECTTCEEEEEEEE-CCSSCSEEEEECSSCCCCCCCSCS----SEEEEEEESCCSC--CCCEEEEECSSCEEEEECEE
T ss_pred ccEEcCCCeEEEEEeC-CCCCCccceEEecCCCcccccCCC----ceEEEEEEecccC--CeEEEEEEcCCccEEEEEEE
Confidence 4468899999999999 4333335888632111011 1100 1224788888743 46999997665556777889
Q ss_pred EEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCCC--eEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEE
Q psy17058 269 HVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP--TVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKC 345 (471)
Q Consensus 269 ~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~--~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 345 (471)
.|..+|...........+.+|+.++|+|.+.| .|.. +|+|+|+++.+...... ......+|.+.....+|.+.|+|
T Consensus 81 ~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~-~~~~~~~l~~~~~~~D~g~~~~C 159 (291)
T 1mq8_A 81 TVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV-GEPAEVTTTVLVRRDHHGANFSC 159 (291)
T ss_dssp EECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC-BTTEEEEEECCCSSSCSSCEEEE
T ss_pred EEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC-CCCceEEEEeeeeeccCCceEEE
Confidence 99887764433222235889999999999987 4544 58999999887543321 22345677777777888889999
Q ss_pred EEEcCCCc--------eEEEEEEEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEE
Q psy17058 346 IGKNSAGT--------EEKVITVAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITL 417 (471)
Q Consensus 346 ~a~n~~g~--------~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~ 417 (471)
+|.|..+. .+....|.|...|. ..+.+..
T Consensus 160 ~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~-------------------------------------------~~~~~~~ 196 (291)
T 1mq8_A 160 RTELDLRPQGLELFENTSAPYQLQTFVLPA-------------------------------------------TPPQLVS 196 (291)
T ss_dssp EEEEECGGGTSCEEEECCCCEECBC-------------------------------------------------------
T ss_pred EEEecCCccCCccccccccceEEEEEecCC-------------------------------------------CCceecC
Confidence 99997663 24446777776641 0123322
Q ss_pred cCCeeeeeCCCeEEEEEEecccCCc---eEEEecCCCCCCCceEEecCeEE
Q psy17058 418 RPVRQTVKPGDIANIRCSAIGATPI---SIRWQPLQGYFPSHVVEYNGELR 465 (471)
Q Consensus 418 ~~~~~~~~~g~~~~l~C~~~g~p~~---~v~W~~~g~~l~~~~~~~~~~l~ 465 (471)
+ ..+.+|+.+.|+|.+.|+|++ .|+|++||+.+..+...+++.+.
T Consensus 197 -p--~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~~~~g~~~~ 244 (291)
T 1mq8_A 197 -P--RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFS 244 (291)
T ss_dssp ---------------------------------------------------
T ss_pred -C--cCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCceeeecCCeEE
Confidence 2 367899999999999998665 69999999999865443444443
No 203
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.82 E-value=5.9e-20 Score=161.33 Aligned_cols=173 Identities=21% Similarity=0.413 Sum_probs=127.1
Q ss_pred ceeEEcCCeEEEEEEccCCCCCC----eEEEEeCCCCCCc-------------CCCceEEe-------eeceEEEeccCC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSP----TQTWIRPDNDGKF-------------GPDVEVYQ-------ELGVLRFNNIAT 245 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~----~v~W~~~~~~~~~-------------~~~~~~~~-------~~~~l~i~~~~~ 245 (471)
...+.+|+.++|.|.+..+.+.+ .+.|+|++..... ..+..+.. ....|.|.+++.
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 87 (221)
T 3eow_R 8 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRV 87 (221)
T ss_dssp CCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSC
T ss_pred cEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCCh
Confidence 44677899999999984434443 4999998653211 22333332 255899999999
Q ss_pred CCCeEEEEEEEcCC-CceEEEEEEEEEeCCceeeCCCccEEecCCCcE-EEEEEEe-ecCCCeEEEEeCCccCCCcc---
Q psy17058 246 GDEGKYTCIAENSA-GKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPL-TLECEAT-GRPMPTVSWVKYIAPFDRNL--- 319 (471)
Q Consensus 246 ~d~G~Y~C~~~~~~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v-~l~C~~~-g~p~~~i~W~~~~~~~~~~~--- 319 (471)
+|+|.|+|.+.+.. +.....+.|.|..+|.+.+.+.... .+|+.+ .|.|.+. +.|.+.+.|++++.......
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~--~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~ 165 (221)
T 3eow_R 88 EDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ--LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVP 165 (221)
T ss_dssp CCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC--CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEEC
T ss_pred HHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc--cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceee
Confidence 99999999999876 6677888888888888776543222 678888 4999988 79999999998755433211
Q ss_pred --cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 320 --ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 320 --~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
........+.|.|..+..+|.|.|+|.|.|..+.....+.|....
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~~~ 212 (221)
T 3eow_R 166 GFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSLTV 212 (221)
T ss_dssp CCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECCCC
T ss_pred cCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEEEE
Confidence 112234457899999999999999999999998877766655543
No 204
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.81 E-value=1.4e-19 Score=157.98 Aligned_cols=170 Identities=16% Similarity=0.207 Sum_probs=120.4
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc--------------CCCceEEee--eceEEEeccCCCCCeEEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF--------------GPDVEVYQE--LGVLRFNNIATGDEGKYT 252 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~--------------~~~~~~~~~--~~~l~i~~~~~~d~G~Y~ 252 (471)
....+.+|+.++|.|.+ .+.|.+.+.|+|++..... ..++.+... ...|.|.+++.+|+|.|+
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3d9a_L 9 ATLSVTPGNSVSLSCRA-SQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYF 87 (213)
T ss_dssp SEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred ccEEEeCCCcEEEEEEC-CCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEE
Confidence 45578899999999999 6777889999986532111 134443322 237999999999999999
Q ss_pred EEEEcCCCce-EEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccCCCc-cc---c-
Q psy17058 253 CIAENSAGKE-VMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPFDRN-LE---R- 321 (471)
Q Consensus 253 C~~~~~~~~~-~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~~~~-~~---~- 321 (471)
|.+.|..+.. .....|.|.. +|.+.+.+... ....|+.+.|.|.+.| .|.+ .+.|++++..+... .. .
T Consensus 88 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~-~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 166 (213)
T 3d9a_L 88 CQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 166 (213)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCC
T ss_pred EeeecCCcceeCCCEEEEEecCCCCceeEeECCCh-hhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCc
Confidence 9999876643 2234566654 56665543322 2346889999999988 6665 89999999877543 11 0
Q ss_pred ----cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 322 ----DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITV 360 (471)
Q Consensus 322 ----~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 360 (471)
......+.|.|.++..+|+|.|+|.|.|..........+
T Consensus 167 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i 209 (213)
T 3d9a_L 167 DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 209 (213)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEEE
T ss_pred cCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEEEe
Confidence 011124589999999999999999999988775444443
No 205
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.81 E-value=2.4e-19 Score=156.05 Aligned_cols=167 Identities=18% Similarity=0.373 Sum_probs=116.6
Q ss_pred EEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCC-CCC--------------CCCcc-----cCcEEEEcCCCCCCC
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQ-EQL--------------PPNMI-----AGETLIINGITKADE 152 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~-~~~--------------~~~~~-----~~~~L~i~~v~~~D~ 152 (471)
|.. |..+.+.+|++++|.|. .+.+.+.+.|++++. ..+ ..+.. ....|.|.+++.+|+
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (210)
T 1lk3_L 4 LTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDT 82 (210)
T ss_dssp EEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHC
Confidence 444 78889999999999999 777778999999631 111 11111 234899999999999
Q ss_pred eEEEEEEEecCCceeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCcC-C--
Q psy17058 153 GVYICSIQNAQGNVFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKFG-P-- 227 (471)
Q Consensus 153 G~Y~C~~~~~~~~~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~~-~-- 227 (471)
|.|.|.+.+..+........+.|... .+|.+.+.+... .+.+|+.++|.|.+....|. ..++|+|++..+... .
T Consensus 83 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 161 (210)
T 1lk3_L 83 AIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPST-EQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDS 161 (210)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCH-HHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEE
T ss_pred eEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCch-hhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEc
Confidence 99999999876542333445666532 246666554433 23479999999999443555 489999998765433 0
Q ss_pred -Cc-----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCce
Q psy17058 228 -DV-----EVYQELGVLRFNNIATGDEGKYTCIAENSAGKE 262 (471)
Q Consensus 228 -~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 262 (471)
.. ......+.|.|.++..+|+|.|+|.|.|.....
T Consensus 162 ~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 162 VTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 00 011113479999999999999999999976543
No 206
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.81 E-value=6.3e-20 Score=160.14 Aligned_cols=173 Identities=18% Similarity=0.301 Sum_probs=120.3
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCC-CCC--------------CCCcc-----cCcEEEEcCCCCC
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQ-EQL--------------PPNMI-----AGETLIINGITKA 150 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~-~~~--------------~~~~~-----~~~~L~i~~v~~~ 150 (471)
+.+...| .+.+.+|++++|.|. .+.+.+.+.|+|... ... ..+.. ....|.|.+++.+
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 80 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAG 80 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChh
Confidence 3455556 788999999999999 778889999999421 110 11111 3457999999999
Q ss_pred CCeEEEEEEEecCCc--eeeeeEEEEEeec--cCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCc
Q psy17058 151 DEGVYICSIQNAQGN--VFQDYASIQVDKR--EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKF 225 (471)
Q Consensus 151 D~G~Y~C~~~~~~~~--~~~~~~~l~v~~~--~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~ 225 (471)
|+|.|+|.+.+..+. .......|.|... .+|.+.+.+... .+.+|+.++|.|.+....|+ +.++|++++..+..
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 159 (213)
T 3mj8_L 81 DEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSS-EELKTNQATLVCMINGFYPADVAVTWEADGTPITQ 159 (213)
T ss_dssp GCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCH-HHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred hCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCc-ccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCC
Confidence 999999999998772 2444555665522 456666655433 34489999999999543454 59999999876543
Q ss_pred CC-------CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEE
Q psy17058 226 GP-------DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNA 266 (471)
Q Consensus 226 ~~-------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 266 (471)
.. ........+.|.|.++..+|.|.|+|.|.|..+....++
T Consensus 160 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 160 GVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp TEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred CcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 21 001112245689999999999999999999876554443
No 207
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.81 E-value=7.7e-19 Score=154.74 Aligned_cols=168 Identities=16% Similarity=0.197 Sum_probs=110.8
Q ss_pred CceeecCCCcEEEEee-CCCCC---CeEEEEeCCCCCC----------C--------CCc--------ccCcEEEEcCCC
Q psy17058 99 RQQSAPEGSQVTIECK-SNDPS---ATIKWSKDNQEQL----------P--------PNM--------IAGETLIINGIT 148 (471)
Q Consensus 99 ~~~~v~~G~~v~l~C~-~~~p~---~~v~W~~~~~~~~----------~--------~~~--------~~~~~L~i~~v~ 148 (471)
.++.+.+|++|+|.|. .+.+. ..|.|+|++.... . .+. ....+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 4578999999999998 54443 3799999843211 0 000 024589999999
Q ss_pred CCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCC
Q psy17058 149 KADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPD 228 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~ 228 (471)
.+|+|.|+|.|.|..+. . ...+.+.+..++.. ......+.+|+.+.|.|.+..+.|.+.++|+++++.+.....
T Consensus 92 ~~D~G~Y~C~a~n~~~~-~--~~~v~~~~~~~~~~---~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~ 165 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFY-E--KALVELKVAALGSD---LHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVE 165 (226)
T ss_dssp GGGCEEEEEEEEETTEE-E--EEEEEEEEEBCCCC---CEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEE
T ss_pred hHHCeeEEEEEECCCcE-E--EEEEEEeeccceec---ccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCc
Confidence 99999999999997665 3 33444443222221 122345678999999999955579999999997765332222
Q ss_pred c-eEEeeec---eEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEe
Q psy17058 229 V-EVYQELG---VLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLT 272 (471)
Q Consensus 229 ~-~~~~~~~---~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~ 272 (471)
. .....++ .+.+..++.+|.|.|+|.|.|..+....++.|.|.+
T Consensus 166 ~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 166 APVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp CCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred eEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 1 1222222 234556788999999999999999988888888754
No 208
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.81 E-value=7.7e-20 Score=155.81 Aligned_cols=147 Identities=17% Similarity=0.329 Sum_probs=105.8
Q ss_pred eeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcccCcEEEEcC-CCCCCCeEEEEEEEecCCceeeeeEEEEEeec
Q psy17058 101 QSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMIAGETLIING-ITKADEGVYICSIQNAQGNVFQDYASIQVDKR 178 (471)
Q Consensus 101 ~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~~~~~L~i~~-v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~ 178 (471)
..+.+|+++.|.|. .+ + +.+.|+|+ +..+... .+.+|.|.+ ++.+|+|.|+|.|.|..+. ......+.|...
T Consensus 9 ~v~~~G~~v~L~C~~~~-~-~~i~W~k~-g~~l~~~--~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~-~~~~~~~~v~~~ 82 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-D-ENLKWEKN-GQELPQK--HDKHLVLQDFSEVEDSGYYVCYTPASNKN-TYLYLKARVGSA 82 (186)
T ss_dssp EEEEETTEEEEECSSCC-C-TTCEEEET-TEEECSC--CCSEEEEESCCTTTSCEEEEEECSSCCCC-CCEEECCCCCSC
T ss_pred EEEeCCcEEEEEEeCCC-C-CceEEEEC-CEECCCC--CCCEEEECCCCccccCEEEEEEEEeCCCc-EEEEEEEEEecc
Confidence 34578999999999 55 3 35999999 6555443 356899999 9999999999999998776 444444444332
Q ss_pred cCCeeee------------------cC-CCc---eeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeec
Q psy17058 179 EMPRIRI------------------HP-NAS---QTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELG 236 (471)
Q Consensus 179 ~~p~~~~------------------~~-~~~---~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 236 (471)
.++.... .. ... ..+.+|+.++|.|.+ |.+.++|+|++..+..... ..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~----p~p~i~W~k~g~~i~~~~~-----~~~ 153 (186)
T 1jbj_A 83 DDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL----TDKTIKWLKDGSIISPLNA-----TKN 153 (186)
T ss_dssp CCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS----SCSCEEEEETTEECCCSSC-----CSS
T ss_pred cccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC----CCCeEEEEECCEECcccCC-----Ccc
Confidence 2221100 00 001 123489999999987 6789999999987543222 367
Q ss_pred eEEEeccCCCCCeEEEEEEEcCCCce
Q psy17058 237 VLRFNNIATGDEGKYTCIAENSAGKE 262 (471)
Q Consensus 237 ~l~i~~~~~~d~G~Y~C~~~~~~~~~ 262 (471)
.|.|.++..+|+|.|+|.|.|..|..
T Consensus 154 ~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 154 TWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred eEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 89999999999999999999887655
No 209
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.81 E-value=4.2e-19 Score=158.82 Aligned_cols=178 Identities=17% Similarity=0.243 Sum_probs=120.6
Q ss_pred eeecCCCceeEEcCCeEEEEEEccCCCCCC-----eEEEEeCCCCCCc---------------CCCceE-----Eeeece
Q psy17058 183 IRIHPNASQTFIVGDRADIQCVLEAGEPSP-----TQTWIRPDNDGKF---------------GPDVEV-----YQELGV 237 (471)
Q Consensus 183 ~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-----~v~W~~~~~~~~~---------------~~~~~~-----~~~~~~ 237 (471)
+.+.++....+.+|+.++|.|.+ .+.|.+ .+.|++++..... ..+..+ ......
T Consensus 5 v~v~~p~~~~v~~G~~v~L~C~~-~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 83 (248)
T 3pv7_A 5 VEMMAGGTQITPLNDNVTIFCNI-FYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDAS 83 (248)
T ss_dssp EECSTTSEEEEETTSCEEECCEE-EESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCC
T ss_pred EEEeCCCCeEEeCCCCEEEeeEE-ecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEE
Confidence 33344455678899999999999 555554 4999997544211 000000 011335
Q ss_pred EEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccC
Q psy17058 238 LRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPF 315 (471)
Q Consensus 238 l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~ 315 (471)
|.|.+++.+|+|.|+|.+.+..+.....+.|.|..+|.+.+.+. ..+..|+.+.|.|.+.| .|.+ .+.|++++..+
T Consensus 84 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~--~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l 161 (248)
T 3pv7_A 84 LRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD--QVGMKENEDKYMCESSGFYPEAINITWEKQTQKF 161 (248)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC----------CEEEEEEEEEBSSCCEEEEEEECSSS
T ss_pred EEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecC--CccccCCCcEEEEEEccEECCCeEEEEEECCccC
Confidence 99999999999999999999887778888999999888877654 24556888899999998 8988 99999999765
Q ss_pred CCc--------------ccccccCceeEEEEeecCCCCCeEEEEEEEcCCCc--eEEEEEEEEe
Q psy17058 316 DRN--------------LERDELTSRAVYTIASVRESDAGQYKCIGKNSAGT--EEKVITVAVE 363 (471)
Q Consensus 316 ~~~--------------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~--~~~~~~l~V~ 363 (471)
... .........+.|.|.....+|.|.|+|.|.|..+. .+.++.|.|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~ 225 (248)
T 3pv7_A 162 PHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225 (248)
T ss_dssp CSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC---
T ss_pred CCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEEc
Confidence 321 00111223467888899999999999999999886 4556777773
No 210
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.81 E-value=7.6e-19 Score=151.74 Aligned_cols=164 Identities=16% Similarity=0.216 Sum_probs=117.2
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCc---eEEeeeceEEEeccCCCCCeEEEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDV---EVYQELGVLRFNNIATGDEGKYTCIA 255 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~---~~~~~~~~l~i~~~~~~d~G~Y~C~~ 255 (471)
.+|.+...+. ..+.+|+.++|.|.+ . .+.+.+.|+|++..+...... ......+.|.|.+++.+|+|.|+|.+
T Consensus 7 ~~P~i~~~p~--~~v~~G~~v~L~C~~-~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a 82 (201)
T 1nkr_A 7 RKPSLLAHPG--PLVKSEETVILQCWS-D-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYG 82 (201)
T ss_dssp CCCEEEEESC--SEEETTCCEEEEEEE-S-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEEEEcC--CccCCCCcEEEEEec-c-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeE
Confidence 4566655554 468899999999998 3 467899999998764321110 11123567999999999999999999
Q ss_pred EcCC-----CceEEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccccc---cc
Q psy17058 256 ENSA-----GKEVMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERD---EL 324 (471)
Q Consensus 256 ~~~~-----~~~~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~---~~ 324 (471)
.+.. ...+..+.|.|.. +|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|++..+....... ..
T Consensus 83 ~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~--~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~ 159 (201)
T 1nkr_A 83 SVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG--PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNG 159 (201)
T ss_dssp EBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC--SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETT
T ss_pred ecCCCCccccCCCCCEEEEeeccCCCCceecCCC--CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCC
Confidence 8642 1234556777765 355555543 36889999999999885 567999999998765321101 11
Q ss_pred CceeEEEEeecCCCCCeEEEEEEEcCC
Q psy17058 325 TSRAVYTIASVRESDAGQYKCIGKNSA 351 (471)
Q Consensus 325 ~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 351 (471)
.....|.|.+++ |+|.|+|.|.+..
T Consensus 160 ~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 160 TFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred ceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 236789999998 9999999999753
No 211
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=1.2e-18 Score=148.10 Aligned_cols=160 Identities=19% Similarity=0.369 Sum_probs=117.5
Q ss_pred eeecCCCcEEEEee-CCCCCC--eEEEEeCCCCCCCCCcc--cCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEE
Q psy17058 101 QSAPEGSQVTIECK-SNDPSA--TIKWSKDNQEQLPPNMI--AGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQV 175 (471)
Q Consensus 101 ~~v~~G~~v~l~C~-~~~p~~--~v~W~~~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v 175 (471)
..+.+|++++|.|. .+.+.+ .+.|+++ +..+..... ....|.|. +.+|+|.|+|.+.|.. .....|.|
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~-~~~l~~~~~~~~~~~l~i~--~~~d~G~Y~C~~~n~~----~~~~~l~V 80 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKG-GVVLKEDALPGQKTEFKVD--SDDQWGEYSCVFLPEP----MGTANIQL 80 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESS-SEEEECTTCCCSEEEEEEC--GGGCCEEEEEEEESTT----SCEEEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeC-CEEeecccccCCcEEEEEe--chhhCeEEEEEEECCc----CcEEEEEE
Confidence 45889999999999 655555 9999998 555443322 23466666 6899999999999832 23444555
Q ss_pred eeccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeEEEEe---CCCCCCc---CCCceEEeee--ceEEEeccC-C
Q psy17058 176 DKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQTWIR---PDNDGKF---GPDVEVYQEL--GVLRFNNIA-T 245 (471)
Q Consensus 176 ~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~---~~~~~~~---~~~~~~~~~~--~~l~i~~~~-~ 245 (471)
..+|.+...+ ....+.+|+.++|.|.+ .+.| .+.+.|++ ++..... ..++.+...+ ..|.|.+++ .
T Consensus 81 --~~~P~~~~~~-~~~~~~~g~~~~l~C~~-~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 156 (184)
T 3b5h_A 81 --HGPPRVKAVK-SSEHINEGETAMLVCKS-ESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNME 156 (184)
T ss_dssp --CCSCCCEESC-SEEEECTTSCEEEEEEC-CCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTT
T ss_pred --ecCCceeecC-CCcEEcCCCcEEEEEEE-CCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecccc
Confidence 4667666554 44568899999999999 6788 79999999 4443221 1334444322 479999999 8
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEEE
Q psy17058 246 GDEGKYTCIAENSAGKEVMNAYIHVL 271 (471)
Q Consensus 246 ~d~G~Y~C~~~~~~~~~~~~~~l~V~ 271 (471)
+|.|.|+|.+.|..|.....+.|.|.
T Consensus 157 ~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 157 ADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp TSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ccCceEEEEEEeCCCcceEEEEEEEe
Confidence 99999999999999988888888775
No 212
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.81 E-value=2e-19 Score=157.99 Aligned_cols=172 Identities=23% Similarity=0.446 Sum_probs=121.5
Q ss_pred eeEEcCCeEEEEEEccCCCCC-----CeEEEEeCCCCCC-------------cCCCceEEe-----eeceEEEeccCCCC
Q psy17058 191 QTFIVGDRADIQCVLEAGEPS-----PTQTWIRPDNDGK-------------FGPDVEVYQ-----ELGVLRFNNIATGD 247 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~~~p~-----~~v~W~~~~~~~~-------------~~~~~~~~~-----~~~~l~i~~~~~~d 247 (471)
..+.+|+.++|.|.+ .+.|. +.+.|++++.... ...+..+.. ....|.|.+++.+|
T Consensus 5 v~~~~G~~v~L~C~~-~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 5 VVALVDTDATLRCSF-SPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCTTSCEEECCBC-CCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred EEEECCCCeEEEEEe-cCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 457799999999998 44443 6899999876531 122222221 14579999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEEeC---CceeeCCCccEEecCCCcEEEEEEE-eecCCCeEEEEe-CCccCCCcccc-
Q psy17058 248 EGKYTCIAENSAGKEVMNAYIHVLTL---PAVTITPSEYVSVRPGEPLTLECEA-TGRPMPTVSWVK-YIAPFDRNLER- 321 (471)
Q Consensus 248 ~G~Y~C~~~~~~~~~~~~~~l~V~~~---p~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~i~W~~-~~~~~~~~~~~- 321 (471)
+|.|+|.+.+. +..+..+.|.|..+ |.+...+ ...+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+......
T Consensus 84 ~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~--~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~ 160 (222)
T 4i0k_A 84 EGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP--NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTS 160 (222)
T ss_dssp CSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC-------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEE
T ss_pred CEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC--CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCccee
Confidence 99999999986 34444556666654 4444433 3367789999999999 789999999999 45544432111
Q ss_pred ---cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 322 ---DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 322 ---~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
........|.|.++..+|+|.|+|.|.|..|....++.|.|..+|
T Consensus 161 ~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 208 (222)
T 4i0k_A 161 QMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQP 208 (222)
T ss_dssp EEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC--
T ss_pred EEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCc
Confidence 112223458899999999999999999999999999999999876
No 213
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.81 E-value=3.2e-19 Score=152.96 Aligned_cols=157 Identities=17% Similarity=0.239 Sum_probs=112.5
Q ss_pred ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC---c---------------CCCceEEeeeceEEEeccCCCCCeEE
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK---F---------------GPDVEVYQELGVLRFNNIATGDEGKY 251 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~---~---------------~~~~~~~~~~~~l~i~~~~~~d~G~Y 251 (471)
...+.+|++++|.|.+..+.+.+.+.|++++..+. . ..+..+. .++.|.|.+++.+|+|.|
T Consensus 7 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~-~~~sL~I~~v~~~D~G~Y 85 (193)
T 2if7_A 7 MVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT-QSYSLQLSNLKMEDTGSY 85 (193)
T ss_dssp EEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC-TTCCEEECSCCGGGCEEE
T ss_pred EEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC-CCeEEEECCCCcccCceE
Confidence 45678999999999984334557999999864321 0 0122333 257899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEEeCCc---eeeCCCccEEecCCC-cEEEEEEEeec-CCCeEEEEeCCccCCCcccccccCc
Q psy17058 252 TCIAENSAGKEVMNAYIHVLTLPA---VTITPSEYVSVRPGE-PLTLECEATGR-PMPTVSWVKYIAPFDRNLERDELTS 326 (471)
Q Consensus 252 ~C~~~~~~~~~~~~~~l~V~~~p~---~~~~~~~~~~~~~g~-~v~l~C~~~g~-p~~~i~W~~~~~~~~~~~~~~~~~~ 326 (471)
.|.+.+..+.....+.|.|..++. +.... .....|. .+.|.|.+.|. |.+.+.|++++..+. .
T Consensus 86 ~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~---~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~---------~ 153 (193)
T 2if7_A 86 RAQISTKTSAKLSSYTLRILRQLRNIQVTNHS---QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLS---------S 153 (193)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCEEEEEEECC---C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEE---------S
T ss_pred EEEEEecCCCeEEEEEEEEEccCCCCeEecCc---eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcC---------C
Confidence 999999887766778888876543 22221 1233465 89999999984 578999999887542 2
Q ss_pred eeEEEEeecCCC-CCeEEEEEEEcCCCceEEEEE
Q psy17058 327 RAVYTIASVRES-DAGQYKCIGKNSAGTEEKVIT 359 (471)
Q Consensus 327 ~~~l~i~~~~~~-d~G~Y~C~a~n~~g~~~~~~~ 359 (471)
...|.|.....+ |+|.|+|.|.|..|..+..+.
T Consensus 154 ~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 154 QPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp SSEEEEEECTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred CCeEEEEeccCcCCCCcEEEEEECCCCccccccc
Confidence 345777655554 899999999999998866543
No 214
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.81 E-value=4.2e-19 Score=154.84 Aligned_cols=164 Identities=24% Similarity=0.368 Sum_probs=117.7
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCC-C--------------CCCcc-----cCcEEEEcCCCCC
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQ-L--------------PPNMI-----AGETLIINGITKA 150 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~-~--------------~~~~~-----~~~~L~i~~v~~~ 150 (471)
+.+...|..+.+.+|++++|.|. .+.|.+.+.|+|++... . ..+.. ...+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 45677788899999999999999 77788999999952111 0 11111 2347999999999
Q ss_pred CCeEEEEEEEecCCc--eeeeeEEEEEee-ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC
Q psy17058 151 DEGVYICSIQNAQGN--VFQDYASIQVDK-REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP 227 (471)
Q Consensus 151 D~G~Y~C~~~~~~~~--~~~~~~~l~v~~-~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~ 227 (471)
|+|.|+|.+.+..+. .......+.|.. ..+|.+.+.+.. ..+.+|+.++|.|.+..+.|.+.++|++++..+....
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~ 160 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPS-ADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGI 160 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCC-HHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSE
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCc-hhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCe
Confidence 999999999987653 234445555543 345555554432 2455799999999995448889999999987654211
Q ss_pred ---------CceEEeeeceEEEeccCCCCCeEEEEEEE
Q psy17058 228 ---------DVEVYQELGVLRFNNIATGDEGKYTCIAE 256 (471)
Q Consensus 228 ---------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~ 256 (471)
........+.|.|..+..+|.|.|+|.|.
T Consensus 161 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 161 ENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 11112224679999999999999999998
No 215
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.81 E-value=4.7e-19 Score=154.22 Aligned_cols=167 Identities=12% Similarity=0.181 Sum_probs=117.4
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCC--CC------------CcCCCceEEee--eceEEEeccCCCCCeEE
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDN--DG------------KFGPDVEVYQE--LGVLRFNNIATGDEGKY 251 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~--~~------------~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y 251 (471)
+....+.+|+.++|.|.+ .+.|.+.+.|+|++. .+ ....++.+... ...|.|.+++.+|+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 85 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKA-SESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIY 85 (210)
T ss_dssp CSEEEECTTSCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCcEEEcCCCCEEEEeeC-CCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEE
Confidence 345578899999999999 677778999999642 21 11234433321 23799999999999999
Q ss_pred EEEEEcCCCce-EEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccCCCc-cc---c
Q psy17058 252 TCIAENSAGKE-VMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPFDRN-LE---R 321 (471)
Q Consensus 252 ~C~~~~~~~~~-~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~~~~-~~---~ 321 (471)
.|.+.|..+.. .....|.|.. +|.+.+.+... .+..|+.+.|.|.+.| .|.+ .+.|+++|..+... .. .
T Consensus 86 ~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~ 164 (210)
T 1lk3_L 86 FCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPST-EQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTD 164 (210)
T ss_dssp EEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCH-HHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECC
T ss_pred EEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCch-hhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCC
Confidence 99999876543 2234566654 46565544322 2347999999999998 5554 89999999887543 11 0
Q ss_pred c-----ccCceeEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy17058 322 D-----ELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEK 356 (471)
Q Consensus 322 ~-----~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 356 (471)
. .....+.|.|..+..+|+|.|+|.|.|.......
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (210)
T 1lk3_L 165 QDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPV 204 (210)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSCE
T ss_pred ccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCee
Confidence 0 1112348999999999999999999998775433
No 216
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.80 E-value=8.2e-19 Score=153.21 Aligned_cols=170 Identities=14% Similarity=0.231 Sum_probs=119.3
Q ss_pred CCceeecCCCcEEEEee-CCCCCC---eEEEEeCCCCCCCCC--------------------c--------ccCcEEEEc
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDPSA---TIKWSKDNQEQLPPN--------------------M--------IAGETLIIN 145 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p~~---~v~W~~~~~~~~~~~--------------------~--------~~~~~L~i~ 145 (471)
|+.+++.+|++++|.|. .+.+.+ .|.|+|++. ..... . ....+|.|.
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDA-GEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECS-SSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCC-CCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 56788999999999999 666654 489999833 22110 0 024579999
Q ss_pred CCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc
Q psy17058 146 GITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF 225 (471)
Q Consensus 146 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~ 225 (471)
+++.+|+|.|.|.+.+..+........+.+. .++...........+..|+.+.|.|.+ .+.|.+.++|++++..+..
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~c~~-~g~p~p~i~W~~~~~~~~~ 161 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVL--VPPLPSLNPGPALEEGQGLTLAASCTA-EGSPAPSVTWDTEVKGTTS 161 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEE--BCCCCEEEECSCEETTCCSEEEEEEEE-EEBSCCEEEEEESSCCEEE
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEe--eeccceeeeeeeeeeeeccccceeeec-cCCcCceEEEEECCccccc
Confidence 9999999999999988766533333333333 223323333334456688999999999 7889999999999887543
Q ss_pred CCCceE---EeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEE
Q psy17058 226 GPDVEV---YQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVL 271 (471)
Q Consensus 226 ~~~~~~---~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 271 (471)
...... ....+.|.|.++..+|+|.|+|.|.|..+.....+.+.|.
T Consensus 162 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 162 SRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred CceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 322111 1124579999999999999999999998876665555543
No 217
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.80 E-value=6.8e-19 Score=156.21 Aligned_cols=173 Identities=18% Similarity=0.332 Sum_probs=121.5
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCC---------------CCCcc-----cCcEEEEcCCC
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQL---------------PPNMI-----AGETLIINGIT 148 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~---------------~~~~~-----~~~~L~i~~v~ 148 (471)
..+.+...|..+.+.+|++++|.|. .+.+.+.+.|+|++.... ..+.. ...+|.|.+++
T Consensus 23 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 102 (237)
T 3sob_L 23 ADIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 102 (237)
T ss_dssp -CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ccceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCC
Confidence 4566777788899999999999999 777888999999521111 11111 34579999999
Q ss_pred CCCCeEEEEEEEecCCceeeeeEEEEEee-ccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeEEEEeCCCCCCcC
Q psy17058 149 KADEGVYICSIQNAQGNVFQDYASIQVDK-REMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQTWIRPDNDGKFG 226 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~-~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~~~~~~~~~ 226 (471)
.+|+|.|+|.+.+..+........+.|.. ..+|.+.+.+... .+.+|+.++|.|.+....| .+.++|++++..+...
T Consensus 103 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~-~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~ 181 (237)
T 3sob_L 103 PEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSD-EQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 181 (237)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCH-HHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred hhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCCh-hhccCCceEEEEEEcccCCCceEEEEEECCCCCCCc
Confidence 99999999999886654233445566543 3456665544332 3446889999999955466 6899999998765432
Q ss_pred C---------CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceE
Q psy17058 227 P---------DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEV 263 (471)
Q Consensus 227 ~---------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 263 (471)
. ........+.|.|.....+|+|.|+|.|.|......
T Consensus 182 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 227 (237)
T 3sob_L 182 SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 227 (237)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred eeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCc
Confidence 1 011112245688999999999999999999875543
No 218
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.79 E-value=2.9e-19 Score=157.94 Aligned_cols=160 Identities=15% Similarity=0.304 Sum_probs=113.0
Q ss_pred cCCceeecCCCcEEEEee-CCCCC-CeEEEEeCCCCCC--------------CCC------------cccCcEEEEcCCC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDPS-ATIKWSKDNQEQL--------------PPN------------MIAGETLIINGIT 148 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p~-~~v~W~~~~~~~~--------------~~~------------~~~~~~L~i~~v~ 148 (471)
.|..+.+.+|+++.|.|. .+.+. +.+.|++++.... ..+ ....+.|.|.+++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 356788999999999999 66674 8999998743311 000 1123459999999
Q ss_pred CCCCeEEEEEEEecC-CceeeeeEEEEEeeccC-CeeeecCCCceeEEcCCeE-EEEEEccCCCCCCeEEEEeCCCCCCc
Q psy17058 149 KADEGVYICSIQNAQ-GNVFQDYASIQVDKREM-PRIRIHPNASQTFIVGDRA-DIQCVLEAGEPSPTQTWIRPDNDGKF 225 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~-~~~~~~~~~l~v~~~~~-p~~~~~~~~~~~v~~g~~~-~L~C~~~~~~p~~~v~W~~~~~~~~~ 225 (471)
.+|+|.|+|.+.+.. +. ......|.|..... |.+... .....+.+|+.+ +|.|.+..+.|.+.+.|++++..+..
T Consensus 86 ~~D~G~Y~C~~~~~~~~~-~~~~~~l~V~~~p~~~~~~~~-~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~ 163 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGT-AEATARLNVFAKPEATEVSPN-KGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEV 163 (231)
T ss_dssp GGGCEEEEEEEECGGGCE-EEEEEEEEEEBCCCCCEEEEC-CSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCC
T ss_pred cccCceEEEEEEecCCCc-eEEEEEEEEEecCCCcEEecC-CcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcc
Confidence 999999999999886 44 55556666653222 333333 333445688888 99999866789999999999887554
Q ss_pred CC----CceEEee-----------eceEEEeccCCCCCeEEEEEEEcC
Q psy17058 226 GP----DVEVYQE-----------LGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 226 ~~----~~~~~~~-----------~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
.. +..+... .+.|.|.....+|.|.|+|.|.|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 164 PVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp CSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred ccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 43 3332221 156888766666799999999994
No 219
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.79 E-value=1.8e-18 Score=154.57 Aligned_cols=172 Identities=17% Similarity=0.254 Sum_probs=118.2
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCCC-------------------CcCCCceEEee----eceEEEeccC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDNDG-------------------KFGPDVEVYQE----LGVLRFNNIA 244 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~~-------------------~~~~~~~~~~~----~~~l~i~~~~ 244 (471)
...+.+|++++|.|.+ .+.| .+.+.|+|++... ....++.+..+ ...|.|.+++
T Consensus 11 ~~~v~~G~~v~L~C~~-~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 11 GGVVQPGKSLRLSCAA-SGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CEEEecCCcEEEEEEe-ccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 3578899999999999 5665 5789999853210 12234444432 3479999999
Q ss_pred CCCCeEEEEEEEcCCCc--eEEEEEEEEEeC---------------CceeeCCCccEEecCCCcEEEEEEEeecCCCeEE
Q psy17058 245 TGDEGKYTCIAENSAGK--EVMNAYIHVLTL---------------PAVTITPSEYVSVRPGEPLTLECEATGRPMPTVS 307 (471)
Q Consensus 245 ~~d~G~Y~C~~~~~~~~--~~~~~~l~V~~~---------------p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~ 307 (471)
.+|+|.|+|.+.|..+. ....+.|.|... +.+... .....+.+|++++|.|.+.+.|.+.+.
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~v~ 168 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQS-PATLSLSPGERATLSCRASQSVRSNLA 168 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEE-CSEEEECTTSCEEEEEEESSCCTTCEE
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEcc-CCEEEecCCCcEEEEEEeCCCccceEE
Confidence 99999999999987322 222346777643 223222 234578999999999999999888999
Q ss_pred EEe--CCccCCC--------------cccccccCceeEEEEeecCCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy17058 308 WVK--YIAPFDR--------------NLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE-EKVITVAVE 363 (471)
Q Consensus 308 W~~--~~~~~~~--------------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~ 363 (471)
|++ ++..+.. ...........+|.|.+++.+|+|.|+|.|.|..+.. .....|.|.
T Consensus 169 W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 169 WYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 999 5554310 0111112345689999999999999999999864433 233566665
No 220
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.79 E-value=4.7e-18 Score=152.15 Aligned_cols=166 Identities=17% Similarity=0.374 Sum_probs=113.4
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCC---------------CCCCcc-----cCcEEEEcCCCC
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQ---------------LPPNMI-----AGETLIINGITK 149 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~---------------~~~~~~-----~~~~L~i~~v~~ 149 (471)
...+...|..+.+.+|++++|.|. .+.+.+.+.|+|+.... ...+.. ...+|.|.+++.
T Consensus 4 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 4 DIVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ 83 (250)
T ss_dssp CCCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh
Confidence 455666788889999999999999 77888899999963111 111111 233799999999
Q ss_pred CCCeEEEEEEEecCCceeeeeEEEEEeecc----------------CCeeeecCCCceeEEcCCeEEEEEEccCCCC--C
Q psy17058 150 ADEGVYICSIQNAQGNVFQDYASIQVDKRE----------------MPRIRIHPNASQTFIVGDRADIQCVLEAGEP--S 211 (471)
Q Consensus 150 ~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~----------------~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p--~ 211 (471)
+|+|.|.|.+.+..+........+.|.... .+...+..+....+.+|+.++|.|.+ .+.+ .
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~ 162 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKD-SGYAFSS 162 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEEC-CSTTGGG
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEe-cCCcccC
Confidence 999999999998765433344556665320 11222222344568899999999999 5555 6
Q ss_pred CeEEEEeC--CCCCCc-----------------CCCceEEee----eceEEEeccCCCCCeEEEEEEEc
Q psy17058 212 PTQTWIRP--DNDGKF-----------------GPDVEVYQE----LGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 212 ~~v~W~~~--~~~~~~-----------------~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
+.+.|+|+ +..+.. ..++.+... ...|.|.+++.+|+|.|.|.+.+
T Consensus 163 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 163 SWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp SEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 89999997 333211 133333321 22699999999999999999986
No 221
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.79 E-value=1.2e-18 Score=146.89 Aligned_cols=152 Identities=13% Similarity=0.203 Sum_probs=107.7
Q ss_pred ceeecCCCcEEEEee-CC--CCCCeEEEEeCCCCCC------------CCCcc--cCcEEEEcCCCCCCCeEEEEEEEec
Q psy17058 100 QQSAPEGSQVTIECK-SN--DPSATIKWSKDNQEQL------------PPNMI--AGETLIINGITKADEGVYICSIQNA 162 (471)
Q Consensus 100 ~~~v~~G~~v~l~C~-~~--~p~~~v~W~~~~~~~~------------~~~~~--~~~~L~i~~v~~~D~G~Y~C~~~~~ 162 (471)
.+.+.+|++++|.|. .+ .+.+.+.|+|++ ..+ ..+.. .++.|.|.+++.+|+|.|+|.+.|.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~-~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~ 83 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGS-TLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYST 83 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETT-EEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEET
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCC-ceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeC
Confidence 457899999999995 33 566789999984 211 11111 3557999999999999999999998
Q ss_pred CCce-eeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEe
Q psy17058 163 QGNV-FQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFN 241 (471)
Q Consensus 163 ~~~~-~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~ 241 (471)
.+.. ......|.|. .++. .......+..++|.|.+ .+.|.+.+.|++++..+... ..+.|.
T Consensus 84 ~g~~~~~~~~~l~V~--~~~~------~p~i~~~~~~v~L~C~~-~g~p~p~i~W~~~g~~l~~~---------~~~~i~ 145 (176)
T 1hng_A 84 NGTRILNKALDLRIL--EMVS------KPMIYWECSNATLTCEV-LEGTDVELKLYQGKEHLRSL---------RQKTMS 145 (176)
T ss_dssp TCCEEEEEEEEEEEE--CCCC------CCEEEEETTTTEEEEEC-SSCSSCEEEEEETTEEEEEE---------SSSEEE
T ss_pred CCCEEEEEEEEEEEe--CCCC------CCEEEecCCcEEEEEEe-cCCCCcEEEEEECCEECCCC---------CcEEEE
Confidence 8872 2334444444 2211 11122345569999999 77888999999988653322 224566
Q ss_pred ccCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 242 NIATGDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 242 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
.+..+|.|.|+|.|.|..|..+....|.+
T Consensus 146 ~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 146 YQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEccCCeEEEEEEEecCCCceecccccC
Confidence 78899999999999999988777665543
No 222
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.79 E-value=2.8e-18 Score=149.58 Aligned_cols=158 Identities=18% Similarity=0.220 Sum_probs=113.8
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC--------------cCCCceEEee--eceEEEeccCCCCCeEEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK--------------FGPDVEVYQE--LGVLRFNNIATGDEGKYT 252 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~--------------~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~ 252 (471)
....+.+|+.++|.|.+ .+.|.+.+.|+|++.... ...++.+... ...|.|.+++.+|+|.|+
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3nl4_L 9 ASVSEPVGGTVTIKCQA-SQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYY 87 (213)
T ss_dssp SEEEEETTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred CeEEEcCCCCEEEEEEe-cCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEE
Confidence 35678899999999999 667889999999642211 1234433321 237999999999999999
Q ss_pred EEEEcCCC---ceEEEEEEEEE---eCCceeeCCCccEEecCCCcEEEEEEEee-cCCCeEEEEeCCccCCCcc------
Q psy17058 253 CIAENSAG---KEVMNAYIHVL---TLPAVTITPSEYVSVRPGEPLTLECEATG-RPMPTVSWVKYIAPFDRNL------ 319 (471)
Q Consensus 253 C~~~~~~~---~~~~~~~l~V~---~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~~i~W~~~~~~~~~~~------ 319 (471)
|.+.|..+ .......|.|. .+|.+.+.+.. ..+.+|+.+.|.|.+.| .|.+.+.|++++..+....
T Consensus 88 C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~ 166 (213)
T 3nl4_L 88 CQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPS-ADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTP 166 (213)
T ss_dssp EEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCC-HHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECC
T ss_pred EecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCc-hhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCc
Confidence 99998765 23334456663 34555443322 24567999999999998 8989999999998875321
Q ss_pred ---cccccCceeEEEEeecCCCCCeEEEEEEE
Q psy17058 320 ---ERDELTSRAVYTIASVRESDAGQYKCIGK 348 (471)
Q Consensus 320 ---~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 348 (471)
........+.|.|..+..+|+|.|+|.|.
T Consensus 167 ~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 167 QNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 11112234679999999999999999999
No 223
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.79 E-value=4e-18 Score=154.98 Aligned_cols=168 Identities=18% Similarity=0.310 Sum_probs=116.1
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCC---------------CCCcc-----cCcEEEEcCCC
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQL---------------PPNMI-----AGETLIINGIT 148 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~---------------~~~~~-----~~~~L~i~~v~ 148 (471)
..+.+...|..+.+.+|++++|.|. .+.+.+.+.|+|++.... ..+.. ...+|+|.+++
T Consensus 11 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 90 (276)
T 3auv_A 11 GDIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 90 (276)
T ss_dssp -CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred cceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCC
Confidence 4567777888999999999999999 777888999999732110 11111 22389999999
Q ss_pred CCCCeEEEEEEEecCCceeeeeEEEEEeecc-----------CCeeeecCCCceeEEcCCeEEEEEEccCCCC--CCeEE
Q psy17058 149 KADEGVYICSIQNAQGNVFQDYASIQVDKRE-----------MPRIRIHPNASQTFIVGDRADIQCVLEAGEP--SPTQT 215 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~-----------~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p--~~~v~ 215 (471)
.+|+|.|+|.+.|..+........|.|.... .|.+.+..+....+.+|+.++|.|.+ .+.+ .+.+.
T Consensus 91 ~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~-~g~~~~~~~v~ 169 (276)
T 3auv_A 91 PEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAA-SGFTISDYWIH 169 (276)
T ss_dssp GGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEE-ESSCGGGSEEE
T ss_pred hhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEe-cCccCCCCEEE
Confidence 9999999999998754323334556665321 23333333345678899999999999 5544 58999
Q ss_pred EEeCCC--CC-----------------CcCCCceEEee----eceEEEeccCCCCCeEEEEEEEcC
Q psy17058 216 WIRPDN--DG-----------------KFGPDVEVYQE----LGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 216 W~~~~~--~~-----------------~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
|+|++. .. ....++.+..+ ...|.|.+++.+|+|.|+|.+.|.
T Consensus 170 W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 170 WVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 999742 11 01234444332 237999999999999999999997
No 224
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.79 E-value=4.4e-18 Score=148.47 Aligned_cols=167 Identities=19% Similarity=0.252 Sum_probs=116.0
Q ss_pred CCceeEEcCCeEEEEEEccCC------CCCCeEEEEeCCCCC-----------------CcCCCceEEe----eeceEEE
Q psy17058 188 NASQTFIVGDRADIQCVLEAG------EPSPTQTWIRPDNDG-----------------KFGPDVEVYQ----ELGVLRF 240 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~------~p~~~v~W~~~~~~~-----------------~~~~~~~~~~----~~~~l~i 240 (471)
+....+.+|+.++|.|.+... .+.+.+.|+|++... ....++.+.. ....|.|
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 345678899999999998432 256799999987531 0112333322 1347999
Q ss_pred eccCCCCCeEEEEEEEcCCCce----EEEEEEEEEeCC---ceeeCCCccEEecCCCcEEEEEEEeec----CCCeEEEE
Q psy17058 241 NNIATGDEGKYTCIAENSAGKE----VMNAYIHVLTLP---AVTITPSEYVSVRPGEPLTLECEATGR----PMPTVSWV 309 (471)
Q Consensus 241 ~~~~~~d~G~Y~C~~~~~~~~~----~~~~~l~V~~~p---~~~~~~~~~~~~~~g~~v~l~C~~~g~----p~~~i~W~ 309 (471)
.+++.+|+|.|.|.+.+..+.. ...+.|.|...+ .+.. + . .+.+|+.++|.|.+.+. |.|.+.|+
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~-~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~ 162 (214)
T 2zg1_A 87 GDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-L-E--PLESGRPTRLSCSLPGSCEAGPPLTFSWT 162 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC----C--CCCTTCCEEEEEECTTCCSCSSCCEEEEE
T ss_pred ccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-C-c--cccCCCeEEEEEEeccCCCCCCCceEEEe
Confidence 9999999999999999875332 135677887643 3322 1 1 36789999999999764 78899999
Q ss_pred eCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCce--EEEEEEEE
Q psy17058 310 KYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE--EKVITVAV 362 (471)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V 362 (471)
+++...... .....+.|.|..+..+|+|.|+|.|.|..+.. +.++.|.|
T Consensus 163 ~~~~~~~~~----~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 163 GNALSPLDP----ETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNV 213 (214)
T ss_dssp SSTTSSSCS----SCCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECCC
T ss_pred CCCCccCCC----CceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEEe
Confidence 998664321 22456789999999999999999999986543 55555543
No 225
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.78 E-value=2.9e-18 Score=154.00 Aligned_cols=175 Identities=14% Similarity=0.241 Sum_probs=121.9
Q ss_pred CceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCC--CC-----------------CcCCCceEEee----eceEEEecc
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDN--DG-----------------KFGPDVEVYQE----LGVLRFNNI 243 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~--~~-----------------~~~~~~~~~~~----~~~l~i~~~ 243 (471)
....+.+|++++|.|.+ .+.| .+.+.|+|++. .+ ....++.+... ...|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~-~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (256)
T 1nqb_A 8 GAELVKPGASVKLSCKA-SGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL 86 (256)
T ss_dssp CCEEECTTCCEEEEEEE-CSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCeeecCCCcEEEEEEe-ccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC
Confidence 34578899999999998 5554 57999999532 11 01234444432 347999999
Q ss_pred CCCCCeEEEEEEEcCCCc-----eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCC-----eEEEEe--C
Q psy17058 244 ATGDEGKYTCIAENSAGK-----EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMP-----TVSWVK--Y 311 (471)
Q Consensus 244 ~~~d~G~Y~C~~~~~~~~-----~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-----~i~W~~--~ 311 (471)
+.+|+|.|.|.+.|..+. ....+.|.|...|.+...+ ....+.+|++++|.|.+.+.|.+ .+.|+| +
T Consensus 87 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~ 165 (256)
T 1nqb_A 87 TSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTP-LSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKP 165 (256)
T ss_dssp CGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEEC-SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECT
T ss_pred ChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecC-cEEEEecCCcEEEEeEecCcccccccceEEEEEEECC
Confidence 999999999999987552 2234667777666655444 34678999999999999988765 999999 5
Q ss_pred CccCC--------------CcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCce-EEEEEEEEecC
Q psy17058 312 IAPFD--------------RNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE-EKVITVAVEHR 365 (471)
Q Consensus 312 ~~~~~--------------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~ 365 (471)
+..+. ............+|.|.+++.+|+|.|+|.|.|..... .....|.|...
T Consensus 166 g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 166 GQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRA 234 (256)
T ss_dssp TSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC-
T ss_pred CCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECC
Confidence 55431 00111112345689999999999999999999854332 23356777654
No 226
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.78 E-value=1.6e-18 Score=152.21 Aligned_cols=176 Identities=19% Similarity=0.327 Sum_probs=117.6
Q ss_pred CceeecCCCcEEEEee-CCCCC-----CeEEEEeCCCCC--------------CCCCcc--------cCcEEEEcCCCCC
Q psy17058 99 RQQSAPEGSQVTIECK-SNDPS-----ATIKWSKDNQEQ--------------LPPNMI--------AGETLIINGITKA 150 (471)
Q Consensus 99 ~~~~v~~G~~v~l~C~-~~~p~-----~~v~W~~~~~~~--------------~~~~~~--------~~~~L~i~~v~~~ 150 (471)
..+.+.+|++++|.|. .+.+. +.+.|++++... ...+.. ...+|.|.+++.+
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 4567899999999999 55443 689999984332 111111 2578999999999
Q ss_pred CCeEEEEEEEecCCceeeeeEEEEEeecc-CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC-CC
Q psy17058 151 DEGVYICSIQNAQGNVFQDYASIQVDKRE-MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG-PD 228 (471)
Q Consensus 151 D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~-~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~-~~ 228 (471)
|+|.|+|.+.+... ......+.|.... .|.+...+ ...+.+|+.++|.|.+..+.|.+.+.|++++...... ..
T Consensus 83 D~G~Y~C~~~~~~~--~~~~~~l~V~~~~~~p~i~~~~--~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~ 158 (222)
T 4i0k_A 83 DEGSYTCFVSIQDF--DSAAVSLQVAAPYSKPSMTLEP--NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVT 158 (222)
T ss_dssp GCSCEEEEEEECCC--CCCCCCCCCCBCCCCCEEECCC-------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEE
T ss_pred cCEEEEEEEEeCCC--ceEEEEEEEEcCCCCCcEEeCC--CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcc
Confidence 99999999998532 3334445554322 24444333 3357789999999999678899999999954432211 11
Q ss_pred ceEE-eee---ceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceee
Q psy17058 229 VEVY-QEL---GVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTI 278 (471)
Q Consensus 229 ~~~~-~~~---~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~ 278 (471)
.... ... ..|.|.++..+|.|.|+|.+.|..+.....+.|.|..+|....
T Consensus 159 ~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 212 (222)
T 4i0k_A 159 TSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTFP 212 (222)
T ss_dssp EEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC------
T ss_pred eeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCccccC
Confidence 1111 111 2378999999999999999999999999999999987775443
No 227
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.78 E-value=2.2e-18 Score=150.97 Aligned_cols=170 Identities=19% Similarity=0.249 Sum_probs=115.9
Q ss_pred CceeEEcCCeEEEEEEccCCCC--CCeEEEEeCC--CCCC-----------------cCCCceEEee----eceEEEecc
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP--SPTQTWIRPD--NDGK-----------------FGPDVEVYQE----LGVLRFNNI 243 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~--~~~~-----------------~~~~~~~~~~----~~~l~i~~~ 243 (471)
....+.+|+.++|.|.+ .+.+ .+.+.|+|++ ..+. ...++.+..+ ...|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 8 GPELKKPGETVKISCKA-SGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCEEECTTCCEEEEEEE-ESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCeEecCCCcEEEEEEE-eCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 34568899999999999 5544 6799999974 2211 1234444322 357999999
Q ss_pred CCCCCeEEEEEEEcCCCc----eEEEEEEEEEeC----CceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCc
Q psy17058 244 ATGDEGKYTCIAENSAGK----EVMNAYIHVLTL----PAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIA 313 (471)
Q Consensus 244 ~~~d~G~Y~C~~~~~~~~----~~~~~~l~V~~~----p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~ 313 (471)
+.+|+|.|.|.+.+..+. ....+.|.|... |.+...+. ...+.+|+.+.|.|.+.| +|.| .+.|++++.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 165 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAP-GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECC-CSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecC-ccccccCCeEEEEEEcccccCCCeEEEEEeCCc
Confidence 999999999999987632 123456677653 44443332 124568999999999998 8988 999999987
Q ss_pred cCCCccc---c--cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy17058 314 PFDRNLE---R--DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVA 361 (471)
Q Consensus 314 ~~~~~~~---~--~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 361 (471)
.+..... . ......+.|.|..... |.|.|+|.|.|..|.......|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~~i~ 217 (219)
T 1c1e_H 166 SSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDKKIV 217 (219)
T ss_dssp CTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEEECC
T ss_pred ccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEEecC
Confidence 7531110 0 1112335788854444 56999999999988876655543
No 228
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.78 E-value=1.1e-18 Score=157.00 Aligned_cols=174 Identities=16% Similarity=0.290 Sum_probs=118.3
Q ss_pred eeEEcCCeEEEEEEccCCCC--CCeEEEEeCC--CCCC----------------cCCCceEEee----eceEEEeccCCC
Q psy17058 191 QTFIVGDRADIQCVLEAGEP--SPTQTWIRPD--NDGK----------------FGPDVEVYQE----LGVLRFNNIATG 246 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~--~~~~----------------~~~~~~~~~~----~~~l~i~~~~~~ 246 (471)
..+.+|++++|.|.+ .+.| .+.+.|+|++ .... ...++.+..+ ...|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~-~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (257)
T 1f3r_B 10 GLVRPSETLSLTCTV-SGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTD 88 (257)
T ss_dssp SEECTTSEEEEEEEE-ESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTT
T ss_pred ccccCCceEEEEEEE-ecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcc
Confidence 468899999999999 5554 6799999963 2211 1234444332 347999999999
Q ss_pred CCeEEEEEEEcCCC-------ce--EEEEEEEEEeCC-------------ceee-CCCccEEecCCCcEEEEEEEeecCC
Q psy17058 247 DEGKYTCIAENSAG-------KE--VMNAYIHVLTLP-------------AVTI-TPSEYVSVRPGEPLTLECEATGRPM 303 (471)
Q Consensus 247 d~G~Y~C~~~~~~~-------~~--~~~~~l~V~~~p-------------~~~~-~~~~~~~~~~g~~v~l~C~~~g~p~ 303 (471)
|+|.|.|.+.|..+ .. ...+.|.|...+ ...+ .......+.+|++++|.|.+.+.|.
T Consensus 89 DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~ 168 (257)
T 1f3r_B 89 DTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNIN 168 (257)
T ss_dssp CCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCB
T ss_pred cCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCC
Confidence 99999999998753 11 133567776543 1111 1123456889999999999999888
Q ss_pred CeEEEEe--CCccCCC--------------cccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecC
Q psy17058 304 PTVSWVK--YIAPFDR--------------NLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 304 ~~i~W~~--~~~~~~~--------------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 365 (471)
+.+.|++ ++..+.. ...........+|.|.+++.+|+|.|+|.|.|..........|.|...
T Consensus 169 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~~ 246 (257)
T 1f3r_B 169 NYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKAA 246 (257)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSSS
T ss_pred CcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeCC
Confidence 8999999 5554310 000011234568999999999999999999997522223356666654
No 229
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.78 E-value=2.1e-19 Score=155.40 Aligned_cols=155 Identities=12% Similarity=0.230 Sum_probs=108.3
Q ss_pred EEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEE-
Q psy17058 193 FIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVL- 271 (471)
Q Consensus 193 v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~- 271 (471)
+.+|++++|.|.+ |.+.++|+|++..+... ....+.|.|.+++.+|+|.|+|.+.+... ..+.|.+.
T Consensus 15 ~~~G~~v~L~C~~----p~~~i~W~k~g~~l~~~-----~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s---~~~~v~v~~ 82 (204)
T 1sy6_A 15 YQEDGSVLLTCDA----EAKNITWFKDGKMIGFL-----TEDKKKWNLGSNAKDPRGMYQCKGSQNKS---KPLQVYYRM 82 (204)
T ss_dssp CCSSSEEEEEECS----CSSEEEEEETTEEEEEE-----ESSCCCEEEEEGGGCCEEEEEEESSSSCC---CCEEEEEEC
T ss_pred ecCCCeEEEEEcC----CCCEEEEEECCEECCCC-----CCCCCeEEeCCCCcCCCEEEEEEecCCCC---eeEEEEEEE
Confidence 3579999999987 67899999998764321 12256799999999999999999755322 12334433
Q ss_pred --------------------------e----CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc-
Q psy17058 272 --------------------------T----LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE- 320 (471)
Q Consensus 272 --------------------------~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~- 320 (471)
. ++.+ ...+ .....+|++++|.|. |.|.+.+.|++++..+.....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~ 158 (204)
T 1sy6_A 83 GSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGI-TQTP-YKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDD 158 (204)
T ss_dssp -------------------------------------CCC-CEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTC
T ss_pred eccccccccccccccccccccccccccccccccce-ecCC-ceeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCC
Confidence 0 1111 1111 122238999999999 789999999999987653211
Q ss_pred ccccCceeEEEEeec-CCCCCeEEEEEEEcCCCce-EEEEEEEEe
Q psy17058 321 RDELTSRAVYTIASV-RESDAGQYKCIGKNSAGTE-EKVITVAVE 363 (471)
Q Consensus 321 ~~~~~~~~~l~i~~~-~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~ 363 (471)
.........|.|.++ +.+|+|.|+|.|.|..|.. +..+.|.++
T Consensus 159 ~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 159 KNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp TTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred ceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 111124679999999 9999999999999999963 556666553
No 230
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.78 E-value=1e-18 Score=152.43 Aligned_cols=170 Identities=19% Similarity=0.355 Sum_probs=117.8
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCC---------------CCCcc-----cCcEEEEcCCCCC
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQL---------------PPNMI-----AGETLIINGITKA 150 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~---------------~~~~~-----~~~~L~i~~v~~~ 150 (471)
+.+...|..+.+.+|++++|.|. .+.+.+.+.|+|.+.... ..+.. ...+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 45666788899999999999999 777889999998521111 11111 3348999999999
Q ss_pred CCeEEEEEEEecCCceeeeeEEEEEee-ccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeEEEEeCCCCCCcCC-
Q psy17058 151 DEGVYICSIQNAQGNVFQDYASIQVDK-REMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQTWIRPDNDGKFGP- 227 (471)
Q Consensus 151 D~G~Y~C~~~~~~~~~~~~~~~l~v~~-~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~~~~~~~~~~- 227 (471)
|+|.|+|.+.+..+........+.|.. ..+|.+.+.+... .+..|+.++|.|.+....| .+.++|++++..+....
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~-~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 160 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSS-EQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVL 160 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCH-HHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEE
T ss_pred cCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCc-eecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceE
Confidence 999999999887544344445566532 3456666555432 3457888999999944344 45999999987644321
Q ss_pred --------CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCce
Q psy17058 228 --------DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKE 262 (471)
Q Consensus 228 --------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 262 (471)
........+.|.|.....+|.|.|+|.+.|.....
T Consensus 161 ~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 161 QSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred eccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 00111123468888888899999999999976443
No 231
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.78 E-value=9.2e-19 Score=151.21 Aligned_cols=165 Identities=13% Similarity=0.176 Sum_probs=114.4
Q ss_pred eeEEcCCeEEEEEEccC---CCCCCeEEEEeCCCCCCc------------CCCceE-EeeeceEEEeccCCCCCeEEEEE
Q psy17058 191 QTFIVGDRADIQCVLEA---GEPSPTQTWIRPDNDGKF------------GPDVEV-YQELGVLRFNNIATGDEGKYTCI 254 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~---~~p~~~v~W~~~~~~~~~------------~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~ 254 (471)
..+.+|+.++|.|.+.. +.|.+.+.|++++..+.. ..+..+ ......|.|.+++.+|+|.|+|.
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 83 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECV 83 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEE
Confidence 46789999999999842 235679999998765311 112221 11246899999999999999999
Q ss_pred EEcCCCce-----EEEEEEEEEeC---CceeeCCCccEEecCCCcEEEEEEEe-ecCCCeEEEEeCCccCCCcccccccC
Q psy17058 255 AENSAGKE-----VMNAYIHVLTL---PAVTITPSEYVSVRPGEPLTLECEAT-GRPMPTVSWVKYIAPFDRNLERDELT 325 (471)
Q Consensus 255 ~~~~~~~~-----~~~~~l~V~~~---p~~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~i~W~~~~~~~~~~~~~~~~~ 325 (471)
+.|..+.. ...+.|.|..+ |.+.. .....|+.+.|.|.+. |+|.|.+.|++++..+..........
T Consensus 84 ~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~-----~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~ 158 (201)
T 1dr9_A 84 VLKYEKDAFKREHLAEVTLSVKADFPTPSISD-----FEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQD 158 (201)
T ss_dssp EEECCTTSCEEEEEEEEEEEEECCCCCCEEEE-----EECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEEC
T ss_pred EEcCCCCccccccccEEEEEEcCCCCCCceEe-----ccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEec
Confidence 99976543 35667777664 22221 1235688999999995 89999999999998876432111111
Q ss_pred -c---eeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 326 -S---RAVYTIASVRESDAGQYKCIGKNSAGTEEKVITV 360 (471)
Q Consensus 326 -~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 360 (471)
. .....+..+..+|.|.|+|.|.|..|..+..+.+
T Consensus 159 ~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 159 PETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp TTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred CCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 1 1122334556789999999999999998877664
No 232
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.78 E-value=3.4e-18 Score=149.41 Aligned_cols=171 Identities=16% Similarity=0.183 Sum_probs=116.2
Q ss_pred CceeEEcCCeEEEEEEccCCCC-CCeEEEEeCCCCCC--------------cCCCceEEe--eeceEEEeccCCCCCeEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP-SPTQTWIRPDNDGK--------------FGPDVEVYQ--ELGVLRFNNIATGDEGKY 251 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~~~~~~~--------------~~~~~~~~~--~~~~l~i~~~~~~d~G~Y 251 (471)
....+.+|+.++|.|.+..+.+ .+.+.|+|++.... ...++.+.. ....|.|.+++.+|+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 87 (216)
T 2xzc_L 8 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADY 87 (216)
T ss_dssp SEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEE
Confidence 3457889999999999524443 57999999653211 122343332 133799999999999999
Q ss_pred EEEEEcCCC--ceEEEEEEEEE---eCCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccCCCc-cc---
Q psy17058 252 TCIAENSAG--KEVMNAYIHVL---TLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPFDRN-LE--- 320 (471)
Q Consensus 252 ~C~~~~~~~--~~~~~~~l~V~---~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~~~~-~~--- 320 (471)
.|.+.|..+ .......|.|. .+|.+.+.+... ....|+.+.|.|.+.| .|.+ .+.|++++..+... ..
T Consensus 88 ~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 166 (216)
T 2xzc_L 88 YCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSD-EQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT 166 (216)
T ss_dssp EEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEEC
T ss_pred EEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCCh-hhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecC
Confidence 999999875 12223456665 345555533221 2235889999999998 5554 89999999887543 11
Q ss_pred cc-----ccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 321 RD-----ELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITV 360 (471)
Q Consensus 321 ~~-----~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 360 (471)
.. .....+.|.|..+..+|+|.|+|.|.|..........+
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~i 211 (216)
T 2xzc_L 167 EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF 211 (216)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEEE
T ss_pred cccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCceEEec
Confidence 00 01123479999999999999999999988665544443
No 233
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.78 E-value=7.6e-18 Score=149.60 Aligned_cols=165 Identities=19% Similarity=0.333 Sum_probs=112.6
Q ss_pred cEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCC------------------CCCCCCcc------cCcEEEEcCCC
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQ------------------EQLPPNMI------AGETLIINGIT 148 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~------------------~~~~~~~~------~~~~L~i~~v~ 148 (471)
.+...|..+.+.+|++++|.|..+.+.+.+.|+|+.. ..+..+.. ...+|+|.+++
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 2 AVTQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp CEEEECSEEEEETTCCEEEEEEECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred cceECccceEEeCCCEEEEEeecCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 4556688899999999999999666788999999621 01112221 24589999999
Q ss_pred CCCCeEEEEEEEecCCc----eeeeeEEEEEeeccC----------CeeeecCCCceeEEcCCeEEEEEEccCCCCCCeE
Q psy17058 149 KADEGVYICSIQNAQGN----VFQDYASIQVDKREM----------PRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQ 214 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~~----~~~~~~~l~v~~~~~----------p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v 214 (471)
.+|+|.|+|.+.+..+. .......+.|....+ +.+... +....+.+|+.++|.|.+ .+.|.+.+
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~-p~~~~v~~G~~v~L~C~~-~~~p~~~i 159 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQS-PQSLTVWEGETAILNCSY-ENSAFDYF 159 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEE-CSEEEEETTSCEEEEEEC-CCTTCCEE
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEcc-CceEEEeCCCeEEEEEEE-ecCCCCcE
Confidence 99999999999987542 111234555542211 123332 345568899999999999 77788999
Q ss_pred EEEeCCCCCC--------------cCCCceEEe----eeceEEEeccCCCCCeEEEEEEEcCC
Q psy17058 215 TWIRPDNDGK--------------FGPDVEVYQ----ELGVLRFNNIATGDEGKYTCIAENSA 259 (471)
Q Consensus 215 ~W~~~~~~~~--------------~~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~~ 259 (471)
.|+|++.... ...++.+.. ....|.|.+++.+|+|.|+|.+.|..
T Consensus 160 ~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 160 PWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9999753211 122333321 13479999999999999999999874
No 234
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.78 E-value=1.7e-18 Score=155.29 Aligned_cols=172 Identities=20% Similarity=0.327 Sum_probs=118.1
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCC-----CCeEEEEeCCC-CCC--------------CCCcc-----cCcEEE
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDP-----SATIKWSKDNQ-EQL--------------PPNMI-----AGETLI 143 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p-----~~~v~W~~~~~-~~~--------------~~~~~-----~~~~L~ 143 (471)
..+.+...|..+.+.+|++++|.|. .+.+ .+.+.|+|++. ... ..+.. ...+|+
T Consensus 33 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 112 (252)
T 3bkj_L 33 SDVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLR 112 (252)
T ss_dssp -CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred cccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEE
Confidence 4566777788999999999999999 6666 58999999742 111 11111 223899
Q ss_pred EcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCC
Q psy17058 144 INGITKADEGVYICSIQNAQGNVFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDN 221 (471)
Q Consensus 144 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~ 221 (471)
|.+++.+|+|.|+|.+.+..+........+.|... .+|.+.+.+... .+.+|+.++|.|.+....|. ..++|+|++.
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 191 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGS 191 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCH-HHHHHTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCCh-hhcCCCcEEEEEEEeeEeCCCcEEEEEECCe
Confidence 99999999999999998875532233345666532 246665544432 23479999999999544555 4899999987
Q ss_pred CCCcC-C---Cc-----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCce
Q psy17058 222 DGKFG-P---DV-----EVYQELGVLRFNNIATGDEGKYTCIAENSAGKE 262 (471)
Q Consensus 222 ~~~~~-~---~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 262 (471)
.+... . .. ..+...+.|.|..+..+|+|.|+|.+.|.....
T Consensus 192 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 192 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp EECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred ecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 64322 0 00 011123468999999999999999999976543
No 235
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.78 E-value=1.2e-18 Score=151.72 Aligned_cols=166 Identities=19% Similarity=0.252 Sum_probs=119.7
Q ss_pred ceeEEcCCeEEEEEEccCCCCCCeEEEEeCC--CCCC------------cCCCceEEe--eeceEEEeccCCCCCeEEEE
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSPTQTWIRPD--NDGK------------FGPDVEVYQ--ELGVLRFNNIATGDEGKYTC 253 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~--~~~~------------~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C 253 (471)
...+.+|+.++|.|.+ . +.+.+.|+|++ .... ...++.+.. ....|.|.+++.+|+|.|+|
T Consensus 9 ~~~v~~G~~v~L~C~~-~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 85 (211)
T 3tv3_L 9 SASGSPGQSITISCTG-T--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYC 85 (211)
T ss_dssp EEEECTTCEEEEEEEC-C--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEE
T ss_pred eEEEcCCCCEEEEEEE-C--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEE
Confidence 5578899999999999 3 78899999953 2211 123333322 23469999999999999999
Q ss_pred EEEcCCC--ceEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEeecC--CCeEEEEeCCccCCCccc-----
Q psy17058 254 IAENSAG--KEVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATGRP--MPTVSWVKYIAPFDRNLE----- 320 (471)
Q Consensus 254 ~~~~~~~--~~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~i~W~~~~~~~~~~~~----- 320 (471)
.+.+..+ .....+.|.|. .+|.+.+.+.. ..+.+|+.+.|.|.+.|.+ .+.+.|+++|..+.....
T Consensus 86 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~ 164 (211)
T 3tv3_L 86 GSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPS-SEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPS 164 (211)
T ss_dssp EEEETTTEEEECCCEEEEECCSCCBCCEEEEECCC-HHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCE
T ss_pred EEecCCCceeECCCceEEEeCCCCcCCeeEecCCc-hhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCce
Confidence 9999877 34445677777 56666665432 2334799999999999853 468999999988753211
Q ss_pred ---ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 321 ---RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVIT 359 (471)
Q Consensus 321 ---~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 359 (471)
.......+.|.|..+..+|+|.|+|.|.|..+...+++.
T Consensus 165 ~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 165 KQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp ECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEEC
T ss_pred ECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeecc
Confidence 011123367899999999999999999999877766553
No 236
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.78 E-value=1.4e-17 Score=145.31 Aligned_cols=165 Identities=16% Similarity=0.303 Sum_probs=111.7
Q ss_pred cCCceeecCCCcEEEEee-CCC-------CCCeEEEEeCCCCC-----C-------------CCCcc-------cCcEEE
Q psy17058 97 TPRQQSAPEGSQVTIECK-SND-------PSATIKWSKDNQEQ-----L-------------PPNMI-------AGETLI 143 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~-------p~~~v~W~~~~~~~-----~-------------~~~~~-------~~~~L~ 143 (471)
.|..+.+.+|++++|.|. ... +.+.+.|+|++... + ..+.. ...+|.
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 85 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLS 85 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEE
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEE
Confidence 467888999999999999 432 56789999984321 1 01111 234799
Q ss_pred EcCCCCCCCeEEEEEEEecCCcee---eeeEEEEEeecc-CCeeeecCCCceeEEcCCeEEEEEEccCC---CCCCeEEE
Q psy17058 144 INGITKADEGVYICSIQNAQGNVF---QDYASIQVDKRE-MPRIRIHPNASQTFIVGDRADIQCVLEAG---EPSPTQTW 216 (471)
Q Consensus 144 i~~v~~~D~G~Y~C~~~~~~~~~~---~~~~~l~v~~~~-~p~~~~~~~~~~~v~~g~~~~L~C~~~~~---~p~~~v~W 216 (471)
|.+++.+|+|.|.|.+.+..+... .....|.|.... .|.+.. +. .+.+|+.++|.|.+... .|.+.++|
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~--~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W 161 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF--LE--PLESGRPTRLSCSLPGSCEAGPPLTFSW 161 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC----C--CCCTTCCEEEEEECTTCCSCSSCCEEEE
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec--Cc--cccCCCeEEEEEEeccCCCCCCCceEEE
Confidence 999999999999999998753311 134555555322 344432 21 25689999999999433 47889999
Q ss_pred EeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCc--eEEEEEEE
Q psy17058 217 IRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGK--EVMNAYIH 269 (471)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~ 269 (471)
++++.... .... ...+.|.|..+..+|+|.|+|.|.|..+. .+..+.|.
T Consensus 162 ~~~~~~~~-~~~~---~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~ 212 (214)
T 2zg1_A 162 TGNALSPL-DPET---TRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLN 212 (214)
T ss_dssp ESSTTSSS-CSSC---CCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECC
T ss_pred eCCCCccC-CCCc---eeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEE
Confidence 99986532 2211 23678999999999999999999997644 34444443
No 237
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.78 E-value=3.9e-18 Score=149.08 Aligned_cols=165 Identities=21% Similarity=0.360 Sum_probs=112.8
Q ss_pred CCceeecCCCcEEEEee-CCCC--CCeEEEEeCCC-CCC--------------CCCcc-----cCcEEEEcCCCCCCCeE
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQ-EQL--------------PPNMI-----AGETLIINGITKADEGV 154 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~-~~~--------------~~~~~-----~~~~L~i~~v~~~D~G~ 154 (471)
|..+.+.+|++++|.|. .+.+ .+.+.|+|++. ..+ ..+.. ....|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 66788999999999999 4443 57899999632 111 11111 23489999999999999
Q ss_pred EEEEEEecCC-ceeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCCCcC--CCc
Q psy17058 155 YICSIQNAQG-NVFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDGKFG--PDV 229 (471)
Q Consensus 155 Y~C~~~~~~~-~~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~~~~--~~~ 229 (471)
|+|.+.+..+ ........+.|... .+|.+.+.+.... ...|+.++|.|.+....|.+ .++|++++..+... ...
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~ 165 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDE-QLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESV 165 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEE
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChh-hccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEec
Confidence 9999998765 21233445666432 4566665444322 33689999999995445654 99999998764433 000
Q ss_pred -------eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceE
Q psy17058 230 -------EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEV 263 (471)
Q Consensus 230 -------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 263 (471)
..+...+.|.|..+..+|+|.|+|.|.|......
T Consensus 166 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 166 TEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred CcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 0111134789999999999999999999865543
No 238
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.78 E-value=3.8e-18 Score=152.53 Aligned_cols=174 Identities=17% Similarity=0.233 Sum_probs=112.5
Q ss_pred CcEEE-cCCceeecCCCcEEEEee-CCCCCCe-----EEEEeCCCCCCC----------------CCcc--------cCc
Q psy17058 92 NEVQV-TPRQQSAPEGSQVTIECK-SNDPSAT-----IKWSKDNQEQLP----------------PNMI--------AGE 140 (471)
Q Consensus 92 ~~v~~-~p~~~~v~~G~~v~l~C~-~~~p~~~-----v~W~~~~~~~~~----------------~~~~--------~~~ 140 (471)
+.+.+ .|..+.+.+|++++|.|. .+.|.+. +.|++++..... .+.. ...
T Consensus 3 ~~v~v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (248)
T 3pv7_A 3 LKVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDA 82 (248)
T ss_dssp EEEECSTTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBC
T ss_pred eEEEEeCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcE
Confidence 34444 345668999999999999 6565554 999997332211 0000 344
Q ss_pred EEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeC
Q psy17058 141 TLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRP 219 (471)
Q Consensus 141 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~ 219 (471)
+|.|.+++.+|+|.|+|.+.+..+. ......|.|. .+|.+.+.+.. .+..|+.++|.|.+....|.+ .++|+++
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~~~-~~~~~~L~V~--~~P~v~~~~~~--~~~~~~~~~L~C~~~g~~P~pi~v~W~k~ 157 (248)
T 3pv7_A 83 SLRLPGIQLEEAGEYRCEVVVTPLK-AQGTVQLEVV--ASPASRLLLDQ--VGMKENEDKYMCESSGFYPEAINITWEKQ 157 (248)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEE-EEEEEEEEEE--BCCEEEEECC----------CEEEEEEEEEBSSCCEEEEEEE
T ss_pred EEEeCCCCHHHCeEEEEEEEeCCcc-ceeEEEEEEe--cCCceEEecCC--ccccCCCcEEEEEEccEECCCeEEEEEEC
Confidence 6999999999999999999987654 4444455554 57777665542 345688889999994447888 9999999
Q ss_pred CCCCCcCC--------------CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCc--eEEEEEEEE
Q psy17058 220 DNDGKFGP--------------DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGK--EVMNAYIHV 270 (471)
Q Consensus 220 ~~~~~~~~--------------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~V 270 (471)
+..+.... ........+.|.|.....+|.|.|+|.+.|..+. ....+.|.|
T Consensus 158 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 158 TQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred CccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 97543210 0011112346888889999999999999998776 455666666
No 239
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.77 E-value=7.2e-18 Score=149.96 Aligned_cols=165 Identities=15% Similarity=0.347 Sum_probs=114.9
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCCC----CCeEEEEeCCCCC-C--------------CCCcc-----cCcEEEEcC
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SNDP----SATIKWSKDNQEQ-L--------------PPNMI-----AGETLIING 146 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~p----~~~v~W~~~~~~~-~--------------~~~~~-----~~~~L~i~~ 146 (471)
..|...|..+.+.+|++++|.|. .+.+ .+.+.|+|++... . ..+.. ...+|+|.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (240)
T 1moe_A 2 IVLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDP 81 (240)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred CceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcC
Confidence 35667788899999999999999 7776 7889999963211 1 11111 223799999
Q ss_pred CCCCCCeEEEEEEEecCCceeeeeEEEEEeecc---CCeeeecCCCceeEEcCCeEEEEEEccCCCC--CCeEEEEeCC-
Q psy17058 147 ITKADEGVYICSIQNAQGNVFQDYASIQVDKRE---MPRIRIHPNASQTFIVGDRADIQCVLEAGEP--SPTQTWIRPD- 220 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~---~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~- 220 (471)
++.+|+|.|+|.+.+..+........|.|.... .|.+.+..+....+.+|+.++|.|.+ .+.| .+.+.|+|+.
T Consensus 82 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~g~p~~~~~v~W~k~~~ 160 (240)
T 1moe_A 82 VEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTA-SGFNIKDTYMHWVKQRP 160 (240)
T ss_dssp CCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECT
T ss_pred CChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEE-cCccCCCCEEEEEEECC
Confidence 999999999999998755423344566665432 23333333445678899999999999 5555 4699999963
Q ss_pred -CCCC-----------------cCCCceEEee----eceEEEeccCCCCCeEEEEEEEc
Q psy17058 221 -NDGK-----------------FGPDVEVYQE----LGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 221 -~~~~-----------------~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
.... ...++.+... ...|.|.+++.+|+|.|+|.+.+
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 161 EQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp TSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 2211 1223333321 24799999999999999999984
No 240
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.77 E-value=9e-17 Score=137.82 Aligned_cols=243 Identities=15% Similarity=0.235 Sum_probs=166.0
Q ss_pred CcEEEcCCceeecCCCcEEEEee--CCCC---CCeEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCce
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK--SNDP---SATIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNV 166 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~--~~~p---~~~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 166 (471)
+.+++.|....+..|+.++|+|. .+.| ...++|+|+ +..+.. ....|.|..++..|+|.|+|.+.+..+.
T Consensus 3 ~tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKD-G~~IsG---aT~tLti~s~t~sdSG~YqCvVTDa~Gc- 77 (304)
T 3shs_A 3 FTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKD-DQPHEN---NTATLTVADATSENAGSYKVTVQDTDTM- 77 (304)
T ss_dssp EEEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEET-TEECSC---CSSEEEESSCCGGGCEEEEEEEEETTTC-
T ss_pred cEEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEEC-CccccC---CcceEEeeeccccCCeEEEEEEEECCCC-
Confidence 56788899999999999999999 6666 458999999 655554 3458999999999999999999998776
Q ss_pred eeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEc--cCCCC-----CCeEEEEeCCCCCCcCCCceEEeeeceEE
Q psy17058 167 FQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVL--EAGEP-----SPTQTWIRPDNDGKFGPDVEVYQELGVLR 239 (471)
Q Consensus 167 ~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~--~~~~p-----~~~v~W~~~~~~~~~~~~~~~~~~~~~l~ 239 (471)
...+..+.|.....+.+.+..+....+..|..+.|.+.+ ..+.+ ..++.|+|++..+ .....|.
T Consensus 78 s~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~I---------sgAq~lT 148 (304)
T 3shs_A 78 TSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVI---------DTTQDIT 148 (304)
T ss_dssp CEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEE---------ESSSEEE
T ss_pred eeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEc---------cCccccc
Confidence 444445555544444455554444445567889998876 55555 5699999998642 1133577
Q ss_pred EeccCCCCCeEEEEEEEcCCCc--eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEe--------ecCCC--eEE
Q psy17058 240 FNNIATGDEGKYTCIAENSAGK--EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEAT--------GRPMP--TVS 307 (471)
Q Consensus 240 i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~--------g~p~~--~i~ 307 (471)
+......++|.|+|++++..+. .+.++.+.+...+ +.........+..|+.+.|.-.+. |.|.. .+.
T Consensus 149 ~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (304)
T 3shs_A 149 IQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMN-VDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYN 227 (304)
T ss_dssp ECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEE-EEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEEE
T ss_pred eeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccc-cchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEEE
Confidence 7888889999999999998664 3444444443222 112222344778899999876654 22332 467
Q ss_pred EEeCCcc-C-C--------CcccccccCceeEEEEeecCCCCCeEEEEEEEc
Q psy17058 308 WVKYIAP-F-D--------RNLERDELTSRAVYTIASVRESDAGQYKCIGKN 349 (471)
Q Consensus 308 W~~~~~~-~-~--------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 349 (471)
|+...+. + . ...........+.|.-.....+|...|.|.|.-
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (304)
T 3shs_A 228 WYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAKL 279 (304)
T ss_dssp EEEECTTCCSCEEEESSSEECGGGEEECTTSCEEESSCCGGGCEEEEEEEEE
T ss_pred EEEeecCccCchhhhhhhhhhhccceeCCCcceeecccccccchheeeHHHH
Confidence 8854322 1 1 111122233456677788889999999999864
No 241
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.77 E-value=3.4e-18 Score=148.96 Aligned_cols=169 Identities=20% Similarity=0.359 Sum_probs=115.3
Q ss_pred cEEEcCCceeecCCCcEEEEee-CCCC---CCeEEEEeCCC-CC--------------CCCCcc-----cCcEEEEcCCC
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECK-SNDP---SATIKWSKDNQ-EQ--------------LPPNMI-----AGETLIINGIT 148 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~-~~~p---~~~v~W~~~~~-~~--------------~~~~~~-----~~~~L~i~~v~ 148 (471)
.+.. |..+.+.+|++++|.|. .+.+ .+.+.|++++. .. ...+.. ....|.|.+++
T Consensus 3 ~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 81 (212)
T 1q0x_L 3 VVTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQ 81 (212)
T ss_dssp CEEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCC
Confidence 3455 78889999999999999 6665 47899999731 11 111211 23489999999
Q ss_pred CCCCeEEEEEEEecCCceeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCc
Q psy17058 149 KADEGVYICSIQNAQGNVFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKF 225 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~ 225 (471)
.+|+|.|.|.+.+..+........+.|.. ..+|.+.+.+... .+..|+.++|.|.+....|. ..++|++++..+..
T Consensus 82 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 160 (212)
T 1q0x_L 82 TEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSS-EELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTA 160 (212)
T ss_dssp GGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCH-HHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred ccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCH-HHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCC
Confidence 99999999999987654223344555532 2456666554432 33478999999999443454 39999999876433
Q ss_pred CCC---ce-----EEeeeceEEEeccCCCCCeEEEEEEEcCCCceE
Q psy17058 226 GPD---VE-----VYQELGVLRFNNIATGDEGKYTCIAENSAGKEV 263 (471)
Q Consensus 226 ~~~---~~-----~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 263 (471)
... .. .....+.|.|..+..+|.|.|+|.|.|......
T Consensus 161 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (212)
T 1q0x_L 161 GMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSN 206 (212)
T ss_dssp TEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEE
T ss_pred CeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCccee
Confidence 211 00 111234688999999999999999999765433
No 242
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.77 E-value=6.5e-18 Score=148.24 Aligned_cols=173 Identities=19% Similarity=0.322 Sum_probs=117.6
Q ss_pred ceeEEcCCeEEEEEEccCCCCCC---eEEEEeCCCCCCc----------------CCCce---------EEeeeceEEEe
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSP---TQTWIRPDNDGKF----------------GPDVE---------VYQELGVLRFN 241 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~---~v~W~~~~~~~~~----------------~~~~~---------~~~~~~~l~i~ 241 (471)
...+..|++++|.|.+ .+.+.+ .++|+|++..+.. ..+.. ....+.+|.|.
T Consensus 10 ~V~~~~G~~v~L~C~~-~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHL-LPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp EEEEETTSCEEECCEE-CSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred EEEEecCCCEEEEEEE-ECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 3467789999999998 555544 4899998754211 00000 11124579999
Q ss_pred ccCCCCCeEEEEEEEcCCCce-EEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEe-ecCCCeEEEEeCCccCCCcc
Q psy17058 242 NIATGDEGKYTCIAENSAGKE-VMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEAT-GRPMPTVSWVKYIAPFDRNL 319 (471)
Q Consensus 242 ~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~i~W~~~~~~~~~~~ 319 (471)
+++.+|+|.|+|.+.+..+.. .....+.+..+|.....+. ......++.+.+.|.+. +.|++.+.|++++..+....
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~ 167 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQ-EVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDT 167 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEEC-CBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEE
T ss_pred cCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeeccc-ceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCc
Confidence 999999999999999876654 3444556665665544432 23456677777777765 57888999999877654221
Q ss_pred cc-----cccCceeEEEEeecCCCCCeEEEEEEEcCCCceE--EEEEEEEec
Q psy17058 320 ER-----DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEE--KVITVAVEH 364 (471)
Q Consensus 320 ~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~ 364 (471)
.. ......+.|.|..+..+|+|.|+|.|.|..|... .++.|.|++
T Consensus 168 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 168 QEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred ceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 11 1112245799999999999999999999988764 455666654
No 243
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.77 E-value=1.3e-18 Score=152.33 Aligned_cols=172 Identities=19% Similarity=0.362 Sum_probs=115.3
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCC-CCCeEEEEeCCCCC-------------------CCCCcc-----cCcEEEEc
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SND-PSATIKWSKDNQEQ-------------------LPPNMI-----AGETLIIN 145 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~-p~~~v~W~~~~~~~-------------------~~~~~~-----~~~~L~i~ 145 (471)
+.+...| .+.+.+|++++|.|. .+. +.+.+.|+|..... ...+.. ...+|.|.
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 4555556 888999999999999 666 88999999942111 001111 23569999
Q ss_pred CCCCCCCeEEEEEEEecCC---c-eeeeeEEEEEeec--cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEe
Q psy17058 146 GITKADEGVYICSIQNAQG---N-VFQDYASIQVDKR--EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIR 218 (471)
Q Consensus 146 ~v~~~D~G~Y~C~~~~~~~---~-~~~~~~~l~v~~~--~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~ 218 (471)
+++.+|+|.|+|.+.+..+ . .......|.|... .+|.+.+.+... .+..|+.++|.|.+....|.+ .++|++
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~-~~~~~~~v~L~C~~~g~~p~~~~v~W~k 159 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSS-EELKENKATLVCLISNFSPSGVTVAWKA 159 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCc-ccccCCcEEEEEEECcccCCCeEEEEEE
Confidence 9999999999999998765 1 1333445555522 456665544432 345679999999995446666 999999
Q ss_pred CCCCCCcCCCc-------eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEE
Q psy17058 219 PDNDGKFGPDV-------EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMN 265 (471)
Q Consensus 219 ~~~~~~~~~~~-------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 265 (471)
++..+...... ......+.|.|.....+|.|.|+|.|.|..+....+
T Consensus 160 ~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 160 NGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp TTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred CCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 98765431110 011113458888888889999999999987655443
No 244
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.77 E-value=4.6e-19 Score=153.25 Aligned_cols=156 Identities=15% Similarity=0.236 Sum_probs=107.1
Q ss_pred ecCCCcEEEEeeCCCCCCeEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEee-----
Q psy17058 103 APEGSQVTIECKSNDPSATIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDK----- 177 (471)
Q Consensus 103 v~~G~~v~l~C~~~~p~~~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~----- 177 (471)
+.+|++++|.|.. |.+.+.|+|+ +..+......+..|.|.+++.+|+|.|+|.+.+.... ...|.+..
T Consensus 15 ~~~G~~v~L~C~~--p~~~i~W~k~-g~~l~~~~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~----~~~v~v~~~~~~~ 87 (204)
T 1sy6_A 15 YQEDGSVLLTCDA--EAKNITWFKD-GKMIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKSK----PLQVYYRMGSADD 87 (204)
T ss_dssp CCSSSEEEEEECS--CSSEEEEEET-TEEEEEEESSCCCEEEEEGGGCCEEEEEEESSSSCCC----CEEEEEEC-----
T ss_pred ecCCCeEEEEEcC--CCCEEEEEEC-CEECCCCCCCCCeEEeCCCCcCCCEEEEEEecCCCCe----eEEEEEEEecccc
Confidence 5689999999986 7889999998 6555422224578999999999999999996543221 23333320
Q ss_pred -c-------------------c---CCeeeecCCCceeEE-cCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC-CceEE
Q psy17058 178 -R-------------------E---MPRIRIHPNASQTFI-VGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP-DVEVY 232 (471)
Q Consensus 178 -~-------------------~---~p~~~~~~~~~~~v~-~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~-~~~~~ 232 (471)
. . .+......+ . .+. +|+.++|.|. +.|.+.++|++++..+.... ...+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~-~v~~~G~~v~L~C~---g~p~p~i~W~k~~~~l~~~~~~~~~~ 162 (204)
T 1sy6_A 88 AKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTP-Y-KVSISGTTVILTCP---QYPGSEILWQHNDKNIGGDEDDKNIG 162 (204)
T ss_dssp -------------------------------CCC-C-EEEEETTEEEEECS---CCCSSCEEEEETTEEESCCTTCTTEE
T ss_pred ccccccccccccccccccccccccccccceecCC-c-eeeecCCcEEEEcC---CCCCCceEEEECCEECCCccCCceEe
Confidence 0 0 011111111 2 344 8999999997 57888999999987754432 22233
Q ss_pred eeeceEEEecc-CCCCCeEEEEEEEcCCCc-eEEEEEEEE
Q psy17058 233 QELGVLRFNNI-ATGDEGKYTCIAENSAGK-EVMNAYIHV 270 (471)
Q Consensus 233 ~~~~~l~i~~~-~~~d~G~Y~C~~~~~~~~-~~~~~~l~V 270 (471)
...+.|.|.++ +.+|+|.|+|.|.|..+. .+..+.|.+
T Consensus 163 ~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 163 SDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp EETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred cCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 34788999999 999999999999998885 244555544
No 245
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.77 E-value=1.5e-17 Score=148.59 Aligned_cols=166 Identities=18% Similarity=0.355 Sum_probs=112.1
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCCC-----CCeEEEEeCCCCC-C--------------CCCcc-----cCcEEEEc
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SNDP-----SATIKWSKDNQEQ-L--------------PPNMI-----AGETLIIN 145 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~p-----~~~v~W~~~~~~~-~--------------~~~~~-----~~~~L~i~ 145 (471)
..+...|..+.+.+|++++|.|. .+.+ .+.+.|+|++... . ..+.. ....|.|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 81 (247)
T 1svz_A 2 ILMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKIS 81 (247)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred CcEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEEC
Confidence 35666788899999999999999 6666 6899999963211 0 11111 23479999
Q ss_pred CCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccC----------CeeeecCCCceeEEcCCeEEEEEEccCCCC--CCe
Q psy17058 146 GITKADEGVYICSIQNAQGNVFQDYASIQVDKREM----------PRIRIHPNASQTFIVGDRADIQCVLEAGEP--SPT 213 (471)
Q Consensus 146 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~----------p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p--~~~ 213 (471)
+++.+|+|.|.|.+.+..+........|.|..... |.+.+.......+.+|+.++|.|.+ .+.+ .+.
T Consensus 82 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~~~ 160 (247)
T 1svz_A 82 RVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKA-TNYAFTDYS 160 (247)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEE-ESSCGGGSC
T ss_pred CCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEE-cCcccCCcE
Confidence 99999999999999887543223345666654321 2222222233458899999999999 4443 569
Q ss_pred EEEEeCCCCCC-------------------cCCCceEEee----eceEEEeccCCCCCeEEEEEEEcC
Q psy17058 214 QTWIRPDNDGK-------------------FGPDVEVYQE----LGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 214 v~W~~~~~~~~-------------------~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
+.|+|++.... ...++.+..+ ...|.|.+++.+|+|.|.|.+.|.
T Consensus 161 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 161 MHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 99999742111 1233333321 247999999999999999999884
No 246
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.77 E-value=5.5e-17 Score=138.46 Aligned_cols=158 Identities=14% Similarity=0.199 Sum_probs=116.5
Q ss_pred eeEEcCCeEEEEEEccCCCCCC--eEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 191 QTFIVGDRADIQCVLEAGEPSP--TQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYI 268 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 268 (471)
..+..|++++|.|.+ +.|.+ .|.|++.+..+ .+.........|.|.+++.+|+|.|.|.+.|..+.....+.|
T Consensus 17 v~v~~G~sv~L~C~a--~~p~P~~~i~W~~~~~~l---~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~l 91 (210)
T 1gsm_A 17 VAVALGASRQLTCRL--ACADRGASVQWRGLDTSL---GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQL 91 (210)
T ss_dssp EEEETTCCEEEEEEE--CCSSTTCEEEEESSTTTT---CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC--CCCCCCcceEEeeccccc---CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEE
Confidence 578899999999998 55556 99999976553 233333446689999999999999999999988888888999
Q ss_pred EEEeCCceeeCCCccEEecCCCcEEEEEEEeec-CC----CeEEEEeCCccCCCccc-c--c-------------ccCce
Q psy17058 269 HVLTLPAVTITPSEYVSVRPGEPLTLECEATGR-PM----PTVSWVKYIAPFDRNLE-R--D-------------ELTSR 327 (471)
Q Consensus 269 ~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~----~~i~W~~~~~~~~~~~~-~--~-------------~~~~~ 327 (471)
.|+.+|........ .+..|+.+ |.|.+.|. |. ++|.|+|++..+..... . . .....
T Consensus 92 tV~~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vt 168 (210)
T 1gsm_A 92 LVYAFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVT 168 (210)
T ss_dssp EEEBCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEE
T ss_pred EEEecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEE
Confidence 99998876543222 56678888 99999984 64 48999999999864321 0 0 11112
Q ss_pred eEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy17058 328 AVYTIASVRESDAGQYKCIGKNSAGTEEK 356 (471)
Q Consensus 328 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 356 (471)
+++.+.....+|.+.|+|.|.+..-....
T Consensus 169 s~~~~~~~~~D~~~~~tC~a~~~L~~~~~ 197 (210)
T 1gsm_A 169 ERWRLPPLGTPVPPALYCQATMRLPGLEL 197 (210)
T ss_dssp EEEECCCCCSSCCSEEEEEEEEEETTEEE
T ss_pred EEEeecCCcccCCceEEEEEEeeCCCCcc
Confidence 34444466677778999999987654433
No 247
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.77 E-value=8.1e-18 Score=147.65 Aligned_cols=173 Identities=19% Similarity=0.243 Sum_probs=112.2
Q ss_pred cCCceeecCCCcEEEEee-CCCC-----CCeEEEEeCC--------CCCCC--------CCcc--------cCcEEEEcC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDP-----SATIKWSKDN--------QEQLP--------PNMI--------AGETLIING 146 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p-----~~~v~W~~~~--------~~~~~--------~~~~--------~~~~L~i~~ 146 (471)
.+..+.+.+|++++|.|. .+.| ...+.|++++ +.... .+.. ...+|.|.+
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 345668999999999999 5555 3489999972 11110 1111 234899999
Q ss_pred CCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCC-CCc
Q psy17058 147 ITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDND-GKF 225 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~-~~~ 225 (471)
++.+|+|.|+|.+.+ .+. ......|.|. .++...... ....+.+|+.++|.|.+ .+.|.+.+.|+++++. +..
T Consensus 87 v~~~D~G~Y~C~~~~-~~~-~~~~~~l~V~--~~~~~~~~~-~~~~~~~g~~v~L~C~~-~g~P~p~i~W~~~~g~~~~~ 160 (222)
T 3sbw_C 87 VKLQDAGVYRCMISY-GGA-DYKRITVKVN--APYNKINQR-ILVVDPVTSEHELTCQA-EGYPKAEVIWTSSDHQVLSG 160 (222)
T ss_dssp CCGGGCEEEEEEEES-SSE-EEEEEEEEEE--BCCCCCEEE-EEEEETTTTEEEEEEEE-EEBSCCEEEEEETTCCEECC
T ss_pred cccccCeEEEEEEEe-CCC-ceeEEEEEEE--CCCCCCCce-eeeeecCCCcEEEEEEe-cCCCCCeEEEEECCCceecC
Confidence 999999999999998 443 4445555554 333211110 11145689999999999 6699999999998544 221
Q ss_pred CCCceE-EeeeceE---EEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCc
Q psy17058 226 GPDVEV-YQELGVL---RFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPA 275 (471)
Q Consensus 226 ~~~~~~-~~~~~~l---~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~ 275 (471)
...... ....+.+ .+..+...|.|.|+|.|.|..+.....+.|.|...|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 161 KTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPL 214 (222)
T ss_dssp EEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC--
T ss_pred ccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCcc
Confidence 111101 1111222 2224567899999999999999999999998876664
No 248
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.77 E-value=4.4e-18 Score=148.28 Aligned_cols=168 Identities=18% Similarity=0.235 Sum_probs=116.2
Q ss_pred CceeEEcCCeEEEEEEccCCCC---CCeEEEEeCCCCCC--------------cCCCceEEee--eceEEEeccCCCCCe
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP---SPTQTWIRPDNDGK--------------FGPDVEVYQE--LGVLRFNNIATGDEG 249 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p---~~~v~W~~~~~~~~--------------~~~~~~~~~~--~~~l~i~~~~~~d~G 249 (471)
....+.+|+.++|.|.+ .+.| .+.+.|+|++.... ...++.+... ...|.|.+++.+|+|
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 8 SALTTSPGETVTLTCRS-STGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp SEEEECTTCCEEEEEEE-SSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CeEeecCCCCEEEEEEe-cccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 45578899999999999 5555 47899999743111 1234433321 237999999999999
Q ss_pred EEEEEEEcCCCce-EEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEeecC-CC-eEEEEeCCccCCCcccc-
Q psy17058 250 KYTCIAENSAGKE-VMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATGRP-MP-TVSWVKYIAPFDRNLER- 321 (471)
Q Consensus 250 ~Y~C~~~~~~~~~-~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p-~~-~i~W~~~~~~~~~~~~~- 321 (471)
.|.|.+.|..+.. .....|.|. .+|.+.+.+.. ..+..|+.+.|.|.+.|.+ ++ .+.|++++..+......
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 165 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPS-SEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETT 165 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEC
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCC-HHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecC
Confidence 9999999876532 233456663 35555554332 2244689999999999854 43 89999999877543110
Q ss_pred -------cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEE
Q psy17058 322 -------DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVI 358 (471)
Q Consensus 322 -------~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 358 (471)
......+.|.|..+..+|+|.|+|.|.|......+++
T Consensus 166 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~v 209 (212)
T 1q0x_L 166 QPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKTL 209 (212)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEEE
T ss_pred CceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeeee
Confidence 0112345789999999999999999999877655443
No 249
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.77 E-value=8.7e-18 Score=149.60 Aligned_cols=165 Identities=18% Similarity=0.309 Sum_probs=112.2
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCC-C--------------CCCcc-----cCcEEEEcCCCCC
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQ-L--------------PPNMI-----AGETLIINGITKA 150 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~-~--------------~~~~~-----~~~~L~i~~v~~~ 150 (471)
+.|...|..+.+.+|++++|.|. .+.+.+.+.|+|+.... . ..+.. ...+|+|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (242)
T 2znx_A 2 IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETE 81 (242)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred CcEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChH
Confidence 35677788899999999999999 77778899999963211 1 11111 2348999999999
Q ss_pred CCeEEEEEEEecCCceeeeeEEEEEeeccC-----------CeeeecCCCceeEEcCCeEEEEEEccCCCC--CCeEEEE
Q psy17058 151 DEGVYICSIQNAQGNVFQDYASIQVDKREM-----------PRIRIHPNASQTFIVGDRADIQCVLEAGEP--SPTQTWI 217 (471)
Q Consensus 151 D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~-----------p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p--~~~v~W~ 217 (471)
|+|.|.|.+.+..+........|.|..... +.....+. ...+.+|++++|.|.+ .+.+ .+.+.|+
T Consensus 82 D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~G~~v~L~C~~-~g~~~~~~~v~W~ 159 (242)
T 2znx_A 82 DFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESG-PSLVKPSQTLSLTCSV-TGDSITSDYXSXI 159 (242)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEEC-CSEECTTSCEEEEEEE-ESSCGGGSCEEEE
T ss_pred HCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCC-cceecCCCeEEEEEEE-EccccCCcceeeE
Confidence 999999999987543223344566653211 11222222 3458899999999999 5554 4789999
Q ss_pred eCC--CCCC----------------cCCCceEEee----eceEEEeccCCCCCeEEEEEEEcC
Q psy17058 218 RPD--NDGK----------------FGPDVEVYQE----LGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 218 ~~~--~~~~----------------~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
|++ ..+. ...++.+..+ ...|.|.+++.+|+|.|+|.+.|.
T Consensus 160 k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 160 RKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred eeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 964 2210 1233333321 247999999999999999999873
No 250
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.76 E-value=6.3e-18 Score=142.70 Aligned_cols=156 Identities=17% Similarity=0.211 Sum_probs=112.1
Q ss_pred eeEEcCCeEEEEEEccC-CCCCCeEEEEe--CCCCC----------CcCCCceEEeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 191 QTFIVGDRADIQCVLEA-GEPSPTQTWIR--PDNDG----------KFGPDVEVYQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~-~~p~~~v~W~~--~~~~~----------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
....+|++++|.|.... +.+.+.|.|++ ++..+ ....++.+.. +++|.|.+++.+|+|.|+|.+.|
T Consensus 9 v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~-ngsL~I~~v~~~DsG~Y~c~~~n 87 (182)
T 1hnf_A 9 TWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFK-NGTLKIKHLKTDDQDIYKVSIYD 87 (182)
T ss_dssp EEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECT-TSCEEECSCCGGGCEEEEEEEEE
T ss_pred EEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECC-CCCEEECCCChhhCEEEEEEEEe
Confidence 45678999999995411 34567999999 77654 2334555554 67899999999999999999999
Q ss_pred CCCce--EEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeec
Q psy17058 258 SAGKE--VMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASV 335 (471)
Q Consensus 258 ~~~~~--~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~ 335 (471)
..+.. ...+.|.|..+.. .| .+.. .+..+.|.|.+.+.|.+.+.|++++..+ .. ....+.+..
T Consensus 88 ~~g~~~~~~~~~L~V~~~~~---~P--~i~~-~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~-------~~~~i~~~~- 152 (182)
T 1hnf_A 88 TKGKNVLEKIFDLKIQERVS---KP--KISW-TCINTTLTCEVMNGTDPELNLYQDGKHL-KL-------SQRVITHKW- 152 (182)
T ss_dssp TTSCEEEEEEEEEEEECCCC---CC--EEEE-ETTTTEEEEECSSCSSCEEEEEESSCEE-EE-------ESSCEEEEC-
T ss_pred CCCceeEEEEEEEEEcCcCC---CC--EEEE-ccCcEEEEeEccCCCCCEEEEEECCEEC-CC-------CCcEEEEec-
Confidence 87764 3466777775311 11 1111 2447999999999898999999999876 11 122333333
Q ss_pred CCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 336 RESDAGQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 336 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
..+|+|.|+|.|.|..|..+....+..
T Consensus 153 ~~~d~G~Y~C~a~N~~~~~~s~~~~~c 179 (182)
T 1hnf_A 153 TTSLSAKFKCTAGNKVSKESSVEPVSC 179 (182)
T ss_dssp CSCEEEEEEEEEECSSCEEEEEEEEEE
T ss_pred ccCCCcEEEEEEEeCCCCcEEcceecC
Confidence 478999999999999999887766643
No 251
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.76 E-value=2.1e-18 Score=150.98 Aligned_cols=167 Identities=20% Similarity=0.316 Sum_probs=116.1
Q ss_pred ceeEEcCCeEEEEEEccCCC-CCCeEEEEeCCCCCC------------------cCCCceEEe--eeceEEEeccCCCCC
Q psy17058 190 SQTFIVGDRADIQCVLEAGE-PSPTQTWIRPDNDGK------------------FGPDVEVYQ--ELGVLRFNNIATGDE 248 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~-p~~~v~W~~~~~~~~------------------~~~~~~~~~--~~~~l~i~~~~~~d~ 248 (471)
...+.+|+.++|.|.+ .+. |.+.+.|+|...... ...++.+.. ....|.|.+++.+|+
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (218)
T 3s96_B 9 SASFSLGASAKLTCTL-NSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDE 87 (218)
T ss_dssp EEEEETTSCEEEEEEE-CGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred cEEECCCCcEEEEEEC-CCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccC
Confidence 5678899999999999 566 788999999432100 112333222 234699999999999
Q ss_pred eEEEEEEEcCCC-----ceEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccCCC
Q psy17058 249 GKYTCIAENSAG-----KEVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPFDR 317 (471)
Q Consensus 249 G~Y~C~~~~~~~-----~~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~~~ 317 (471)
|.|.|.+.+..+ .....+.|.|. .+|.+.+.+.. .....|+.+.|.|.+.| .|.+ .+.|++++..+..
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~-~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 166 (218)
T 3s96_B 88 AIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPS-SEELKENKATLVCLISNFSPSGVTVAWKANGTPITQ 166 (218)
T ss_dssp EEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--
T ss_pred EEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCC-cccccCCcEEEEEEECcccCCCeEEEEEECCEECcC
Confidence 999999998765 23334677787 45555554332 23445789999999998 6767 8999999988754
Q ss_pred ccc-------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEE
Q psy17058 318 NLE-------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVI 358 (471)
Q Consensus 318 ~~~-------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 358 (471)
... .......+.|.|.....+|+|.|+|.|.|..+....++
T Consensus 167 ~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 167 GVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp ------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred ceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 211 01112234588888888899999999999988766554
No 252
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.76 E-value=4.6e-18 Score=149.29 Aligned_cols=169 Identities=17% Similarity=0.232 Sum_probs=117.2
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCCCC---------------------cCCCceEEee----eceEEEec
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDNDGK---------------------FGPDVEVYQE----LGVLRFNN 242 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~~~---------------------~~~~~~~~~~----~~~l~i~~ 242 (471)
...+.+|+.++|.|.+ .+.+ .+.+.|+|+..... ...++.+..+ ...|.|.+
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCAT-SGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNT 87 (222)
T ss_dssp CCEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred ceeEcCCCEEEEEEEe-cCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECc
Confidence 3467899999999999 4444 57899998642210 1234444332 34799999
Q ss_pred cCCCCCeEEEEEEEcCCC-----ceEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeC
Q psy17058 243 IATGDEGKYTCIAENSAG-----KEVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKY 311 (471)
Q Consensus 243 ~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~ 311 (471)
++.+|+|.|.|.+.+..+ .......|.|.. +|.+...+.. ..+.+|+.+.|.|.+.|. |.| .+.|+++
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 166 (222)
T 1q9r_B 88 LRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNSG 166 (222)
T ss_dssp CCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCC-SCCCCSSEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred CCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEcccc-ccccCCCcEEEEEEEccEECCCCEEEEecC
Confidence 999999999999998653 222334666653 3455443321 235689999999999985 888 9999999
Q ss_pred CccCCCccc-----ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy17058 312 IAPFDRNLE-----RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVA 361 (471)
Q Consensus 312 ~~~~~~~~~-----~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 361 (471)
+..+..... .......+.|.|..+..+| |.|+|.|.|..|.......|.
T Consensus 167 g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i~ 220 (222)
T 1q9r_B 167 SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 220 (222)
T ss_dssp TBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEECC
T ss_pred CeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEecc
Confidence 877642110 0012234578999999899 999999999999876655543
No 253
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.76 E-value=1e-17 Score=150.29 Aligned_cols=179 Identities=16% Similarity=0.192 Sum_probs=117.8
Q ss_pred EEEcCCceeecCCCcEEEEee-CCC--CCCeEEEEeCC-CCCC-------------------CCCcc-------cCcEEE
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SND--PSATIKWSKDN-QEQL-------------------PPNMI-------AGETLI 143 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~~--p~~~v~W~~~~-~~~~-------------------~~~~~-------~~~~L~ 143 (471)
+...|.++.+.+|++|+|.|. .+. +.+.+.|+|.. +..+ ..+.. ...+|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 83 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH 83 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence 456677889999999999999 553 36789999941 1111 01111 123599
Q ss_pred EcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeec-------------cCCeeeecCCCceeEEcCCeEEEEEEccCCCC
Q psy17058 144 INGITKADEGVYICSIQNAQGNVFQDYASIQVDKR-------------EMPRIRIHPNASQTFIVGDRADIQCVLEAGEP 210 (471)
Q Consensus 144 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~-------------~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p 210 (471)
|.+++.+|+|.|+|.+.+..+........+.|... .++.+... +....+.+|++++|.|.+ .+.+
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~-p~~~~v~~G~~v~L~C~~-~~~~ 161 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQT-PASLAVSLGQRATISCRA-SENV 161 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEE-CSEEEECTTSCEEEEEEE-SSCC
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECc-CCeEEEeCCCCEEEEEEe-cCcc
Confidence 99999999999999999865543344556666531 12333333 345678899999999999 5666
Q ss_pred CC----eEEEEeCCCCCCc--------------CCCceEEee--eceEEEeccCCCCCeEEEEEEEcCCCce-EEEEEEE
Q psy17058 211 SP----TQTWIRPDNDGKF--------------GPDVEVYQE--LGVLRFNNIATGDEGKYTCIAENSAGKE-VMNAYIH 269 (471)
Q Consensus 211 ~~----~v~W~~~~~~~~~--------------~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~ 269 (471)
.+ .+.|+|++..... ..++..... ...|.|.+++.+|+|.|+|.+.|..... .....|.
T Consensus 162 ~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~ 241 (253)
T 3uzq_A 162 DRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLE 241 (253)
T ss_dssp EETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEE
T ss_pred ccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEE
Confidence 65 8999996322111 123332221 2369999999999999999998864332 2334566
Q ss_pred EEeCC
Q psy17058 270 VLTLP 274 (471)
Q Consensus 270 V~~~p 274 (471)
|...+
T Consensus 242 v~~~~ 246 (253)
T 3uzq_A 242 IKRPL 246 (253)
T ss_dssp ECCC-
T ss_pred EcCCC
Confidence 65433
No 254
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.76 E-value=2.4e-17 Score=146.33 Aligned_cols=160 Identities=16% Similarity=0.280 Sum_probs=111.4
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCC-----------------CCcCCCceEEe---eeceEEEeccCCCCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDND-----------------GKFGPDVEVYQ---ELGVLRFNNIATGDE 248 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~-----------------~~~~~~~~~~~---~~~~l~i~~~~~~d~ 248 (471)
....+.+|++++|.|.. +.|.+.+.|+|+... .....++.+.. ....|.|.+++.+|+
T Consensus 8 ~~~~v~~G~~v~L~C~~--~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~Ds 85 (238)
T 2p1y_A 8 RNKVAVTGGKVTLSCNQ--TNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQT 85 (238)
T ss_dssp SEEEEETTCCEEEEEEE--CSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGC
T ss_pred cceEEeCCCEEEEEeec--CCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccC
Confidence 45678899999999993 678899999996211 01123444432 244799999999999
Q ss_pred eEEEEEEEcCCCc-----eEEEEEEEEEeCC------------ceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeC
Q psy17058 249 GKYTCIAENSAGK-----EVMNAYIHVLTLP------------AVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKY 311 (471)
Q Consensus 249 G~Y~C~~~~~~~~-----~~~~~~l~V~~~p------------~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~ 311 (471)
|.|.|.+.|..+. ......|.|...+ .+...+ ....+.+|++++|.|.+.+.|.+.+.|+++
T Consensus 86 G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~ 164 (238)
T 2p1y_A 86 SVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSP-QSLTVWEGETAILNCSYENSAFDYFPWYQQ 164 (238)
T ss_dssp EEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEEC-SEEEEETTSCEEEEEECCCTTCCEEEEEEE
T ss_pred eeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccC-ceEEEeCCCeEEEEEEEecCCCCcEEEEEE
Confidence 9999999987542 1123567776554 233333 346789999999999999999999999997
Q ss_pred Ccc--CC--------------Ccccc--cccCceeEEEEeecCCCCCeEEEEEEEcCC
Q psy17058 312 IAP--FD--------------RNLER--DELTSRAVYTIASVRESDAGQYKCIGKNSA 351 (471)
Q Consensus 312 ~~~--~~--------------~~~~~--~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 351 (471)
+.. .. ..... .......+|.|.+++.+|+|.|+|.|.|..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 165 FPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 421 10 00000 012235789999999999999999999984
No 255
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=1e-17 Score=149.64 Aligned_cols=172 Identities=14% Similarity=0.231 Sum_probs=113.1
Q ss_pred CCceeecCCCcEEEEee-CCCC--CCeEEEEeCCCCC--------------------CCCCcc-------cCcEEEEcCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQEQ--------------------LPPNMI-------AGETLIINGI 147 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~~~--------------------~~~~~~-------~~~~L~i~~v 147 (471)
|..+.+.+|++++|.|. .+.| .+.+.|+|++... ...+.. ...+|+|.++
T Consensus 9 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (247)
T 2ghw_B 9 SGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL 88 (247)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC
Confidence 45688999999999999 6665 5789999952110 111111 2347999999
Q ss_pred CCCCCeEEEEEEEecCCc-eeeeeEEEEEeec-------------cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCe
Q psy17058 148 TKADEGVYICSIQNAQGN-VFQDYASIQVDKR-------------EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPT 213 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~~-~~~~~~~l~v~~~-------------~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~ 213 (471)
+.+|+|.|+|.+.+..+. .......|.|... .++.+.. .+....+.+|+.++|.|.+ .+.|.+.
T Consensus 89 ~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~G~~v~L~C~~-~~~~~~~ 166 (247)
T 2ghw_B 89 RAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQ-SPATLSLSPGERATLSCRA-SQSVRSN 166 (247)
T ss_dssp CGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEE-ECSEEEECTTSCEEEEEEE-SSCCTTC
T ss_pred CHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEc-cCCEEEecCCCcEEEEEEe-CCCccce
Confidence 999999999999986221 1222345565532 1222322 3344567899999999999 6777789
Q ss_pred EEEEe--CCCCCC------------cCCCceEEe--eeceEEEeccCCCCCeEEEEEEEcCCCce-EEEEEEEEE
Q psy17058 214 QTWIR--PDNDGK------------FGPDVEVYQ--ELGVLRFNNIATGDEGKYTCIAENSAGKE-VMNAYIHVL 271 (471)
Q Consensus 214 v~W~~--~~~~~~------------~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~ 271 (471)
+.|+| ++..+. ...++.+.. ....|.|.+++.+|+|.|+|.+.|..... .....|.|.
T Consensus 167 v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 167 LAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 99999 444321 122333221 23469999999999999999998754322 223345543
No 256
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.76 E-value=1.3e-17 Score=142.81 Aligned_cols=155 Identities=19% Similarity=0.274 Sum_probs=106.3
Q ss_pred cCCceeecCCCcEEEEee-CC-CCCCeEEEEeCCCCCC----CC----------------Ccc--cCcEEEEcCCCCCCC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SN-DPSATIKWSKDNQEQL----PP----------------NMI--AGETLIINGITKADE 152 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~-~p~~~v~W~~~~~~~~----~~----------------~~~--~~~~L~i~~v~~~D~ 152 (471)
.|..+.+.+|++|+|.|. .+ .+.+.+.|+++ +..+ .. +.. .+.+|+|.+++.+|+
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~ 82 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFN-ETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDT 82 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEET-TEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGC
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEEC-CEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccC
Confidence 356778999999999999 43 45579999998 3321 00 101 357899999999999
Q ss_pred eEEEEEEEecCCceeeeeEEEEEeecc-CCeeeecCCCceeEEcCC-eEEEEEEccCCCCCCeEEEEeCCCCCCcCCCce
Q psy17058 153 GVYICSIQNAQGNVFQDYASIQVDKRE-MPRIRIHPNASQTFIVGD-RADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVE 230 (471)
Q Consensus 153 G~Y~C~~~~~~~~~~~~~~~l~v~~~~-~p~~~~~~~~~~~v~~g~-~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~ 230 (471)
|.|+|.+.+..+. ......|.|.... .|.+.... .....|. .++|.|.+....|.+.++|++++..+
T Consensus 83 G~Y~C~~~~~~~~-~~~~~~L~V~~~~~~p~i~~~~---~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l------- 151 (193)
T 2if7_A 83 GSYRAQISTKTSA-KLSSYTLRILRQLRNIQVTNHS---QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTL------- 151 (193)
T ss_dssp EEEEEEEECSSCE-EEEEEEEEEECCCEEEEEEECC---C---CSSEEEEEEEEEESCCTTCEEEEEETTEEE-------
T ss_pred ceEEEEEEecCCC-eEEEEEEEEEccCCCCeEecCc---eeecCCCceEEEEEEEecCCCceEEEEEeCCEEc-------
Confidence 9999999988776 4445555554221 13333222 1233465 89999999544568899999987642
Q ss_pred EEeeeceEEEeccCCC-CCeEEEEEEEcCCCceEEE
Q psy17058 231 VYQELGVLRFNNIATG-DEGKYTCIAENSAGKEVMN 265 (471)
Q Consensus 231 ~~~~~~~l~i~~~~~~-d~G~Y~C~~~~~~~~~~~~ 265 (471)
..+..|.|.....+ |.|.|+|.|.|..+..+..
T Consensus 152 --~~~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 152 --SSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp --ESSSEEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred --CCCCeEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 12445777655554 8999999999998876544
No 257
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.76 E-value=5.4e-18 Score=146.34 Aligned_cols=163 Identities=13% Similarity=0.255 Sum_probs=108.6
Q ss_pred ceeecCCCcEEEEee-CC----CCCCeEEEEeCCCCCCC--------------CCc----ccCcEEEEcCCCCCCCeEEE
Q psy17058 100 QQSAPEGSQVTIECK-SN----DPSATIKWSKDNQEQLP--------------PNM----IAGETLIINGITKADEGVYI 156 (471)
Q Consensus 100 ~~~v~~G~~v~l~C~-~~----~p~~~v~W~~~~~~~~~--------------~~~----~~~~~L~i~~v~~~D~G~Y~ 156 (471)
.+.+.+|++++|.|. .. .+.+.+.|+++ +..+. .+. ....+|.|.+++.+|+|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~-~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKE-KKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEET-TEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeC-CcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEE
Confidence 467899999999999 32 25578999998 44331 111 13568999999999999999
Q ss_pred EEEEecCCceee--eeEEEEEeeccC---CeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceE
Q psy17058 157 CSIQNAQGNVFQ--DYASIQVDKREM---PRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEV 231 (471)
Q Consensus 157 C~~~~~~~~~~~--~~~~l~v~~~~~---p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~ 231 (471)
|.+.+..+.... ....+.|.+..+ |.+.... ...|+.++|.|.+..+.|.+.++|++++..+........
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~-----~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~ 156 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFE-----IPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVS 156 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEE-----CSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEE
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCCCCceEecc-----CCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEE
Confidence 999997654221 133444443333 3332211 135889999999955889999999999876543322111
Q ss_pred Eeee-ceE---EEeccCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 232 YQEL-GVL---RFNNIATGDEGKYTCIAENSAGKEVMNAYI 268 (471)
Q Consensus 232 ~~~~-~~l---~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 268 (471)
.... +.+ .+..+...|.|.|+|.|.|..+..+..+.+
T Consensus 157 ~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 157 QDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp ECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred ecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 1111 222 234456689999999999998887766543
No 258
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.76 E-value=3.1e-18 Score=149.12 Aligned_cols=170 Identities=18% Similarity=0.347 Sum_probs=116.2
Q ss_pred EEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCC-CCCC--------------CCCcc-----cCcEEEEcCCCCCCCe
Q psy17058 94 VQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDN-QEQL--------------PPNMI-----AGETLIINGITKADEG 153 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~-~~~~--------------~~~~~-----~~~~L~i~~v~~~D~G 153 (471)
+...| .+.+.+|++++|.|... +.+.+.|+|++ +... ..+.. ...+|.|.+++.+|+|
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 81 (211)
T 3tv3_L 4 LTQPP-SASGSPGQSITISCTGT-SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEA 81 (211)
T ss_dssp CBCCS-EEEECTTCEEEEEEECC-CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCE
T ss_pred EEeCc-eEEEcCCCCEEEEEEEC-CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCE
Confidence 33444 78899999999999944 88999999952 1111 11111 3457999999999999
Q ss_pred EEEEEEEecCC-ceeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCC-CCCeEEEEeCCCCCCcCC--
Q psy17058 154 VYICSIQNAQG-NVFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGE-PSPTQTWIRPDNDGKFGP-- 227 (471)
Q Consensus 154 ~Y~C~~~~~~~-~~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~-p~~~v~W~~~~~~~~~~~-- 227 (471)
.|+|.+.+..+ ........|.|.. ..+|.+.+.+... .+.+|+.++|.|.+.... |.+.+.|++++..+....
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 160 (211)
T 3tv3_L 82 VYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSS-EELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVET 160 (211)
T ss_dssp EEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCH-HHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEE
T ss_pred EEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCch-hhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCccc
Confidence 99999999876 2244445566552 1456666655433 334799999999994333 357999999987643210
Q ss_pred ------CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEE
Q psy17058 228 ------DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNA 266 (471)
Q Consensus 228 ------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 266 (471)
....+...+.|.|..+..+|.|.|+|.+.|..+....++
T Consensus 161 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 161 TTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp CCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 000111135688999988999999999999876554443
No 259
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=6e-18 Score=152.10 Aligned_cols=162 Identities=15% Similarity=0.223 Sum_probs=108.9
Q ss_pred cCCceeecCCCcEEEEee-CCCC--CCeEEEEeCCC-CCC------------------CCCcc-------cCcEEEEcCC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQ-EQL------------------PPNMI-------AGETLIINGI 147 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~-~~~------------------~~~~~-------~~~~L~i~~v 147 (471)
+|....+.+|++|+|.|. .+.| .+.+.|+|++. ..+ ..+.. ...+|+|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (257)
T 1f3r_B 6 ESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSL 85 (257)
T ss_dssp EECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESC
T ss_pred CCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCC
Confidence 345678999999999999 6553 68899999621 111 11111 1348999999
Q ss_pred CCCCCeEEEEEEEecCC-------c-eeeeeEEEEEeecc------------CCeeeecCCCceeEEcCCeEEEEEEccC
Q psy17058 148 TKADEGVYICSIQNAQG-------N-VFQDYASIQVDKRE------------MPRIRIHPNASQTFIVGDRADIQCVLEA 207 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~-------~-~~~~~~~l~v~~~~------------~p~~~~~~~~~~~v~~g~~~~L~C~~~~ 207 (471)
+.+|+|.|.|.+.+..+ . .......|.|.... .+......+....+.+|+.++|.|.+ .
T Consensus 86 ~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~-~ 164 (257)
T 1f3r_B 86 QTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKG-S 164 (257)
T ss_dssp CTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEEC-S
T ss_pred CcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEE-C
Confidence 99999999999998753 1 11223455554321 01111222334567899999999999 6
Q ss_pred CCCCCeEEEEe--CCCCCCc------------CCCceEEe--eeceEEEeccCCCCCeEEEEEEEcCC
Q psy17058 208 GEPSPTQTWIR--PDNDGKF------------GPDVEVYQ--ELGVLRFNNIATGDEGKYTCIAENSA 259 (471)
Q Consensus 208 ~~p~~~v~W~~--~~~~~~~------------~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~ 259 (471)
+.+.+.+.|+| ++..+.. ..++.+.. ....|.|.+++.+|+|.|+|.+.|..
T Consensus 165 ~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 165 QNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp SCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred CcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 67778999999 4443211 22333322 23479999999999999999999864
No 260
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.76 E-value=2.3e-17 Score=148.27 Aligned_cols=178 Identities=17% Similarity=0.246 Sum_probs=116.9
Q ss_pred CCceeEEcCCeEEEEEEccCC-CCCCeEEEEeCCCCC------------------CcCCCceEEee----eceEEEeccC
Q psy17058 188 NASQTFIVGDRADIQCVLEAG-EPSPTQTWIRPDNDG------------------KFGPDVEVYQE----LGVLRFNNIA 244 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~-~p~~~v~W~~~~~~~------------------~~~~~~~~~~~----~~~l~i~~~~ 244 (471)
+....+.+|++++|.|.+... .+.+.+.|+|..... ....++.+... ...|.|.+++
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 94 (257)
T 3gkz_A 15 SGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVS 94 (257)
T ss_dssp ECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCC
Confidence 334568899999999998332 356899999853210 01233444332 2269999999
Q ss_pred CCCCeEEEEEEEcCCCc----eEEEEEEEEEeC--------------CceeeCCCccEEecCCCcEEEEEEEeecCCC-e
Q psy17058 245 TGDEGKYTCIAENSAGK----EVMNAYIHVLTL--------------PAVTITPSEYVSVRPGEPLTLECEATGRPMP-T 305 (471)
Q Consensus 245 ~~d~G~Y~C~~~~~~~~----~~~~~~l~V~~~--------------p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~ 305 (471)
.+|+|.|.|.+.|..+. ....+.|.|..+ +.+... .....+.+|++++|.|.+.+.+.+ .
T Consensus 95 ~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~ 173 (257)
T 3gkz_A 95 SEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQS-PAIMSASPGEKVTLTCSASSSVSSSH 173 (257)
T ss_dssp GGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECS-CSEEEECTTCCEEEEEEESSCCCGGG
T ss_pred hhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcC-CceEEEeCCCcEEEEEEEccCccceE
Confidence 99999999999986221 223456666654 333333 335688999999999999988877 8
Q ss_pred EEEEeC--CccCC--------------CcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCce-EEEEEEEEecCC
Q psy17058 306 VSWVKY--IAPFD--------------RNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE-EKVITVAVEHRP 366 (471)
Q Consensus 306 i~W~~~--~~~~~--------------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p 366 (471)
+.|++. +..+. ............+|.|.+++.+|+|.|+|.|.|..... ..-..|.|...+
T Consensus 174 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~~ 251 (257)
T 3gkz_A 174 LYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIKRAP 251 (257)
T ss_dssp EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCC-
T ss_pred EEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEEeCC
Confidence 999984 22221 00111112245679999999999999999999854332 223467776554
No 261
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.76 E-value=2.4e-18 Score=156.02 Aligned_cols=197 Identities=16% Similarity=0.210 Sum_probs=113.0
Q ss_pred CCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC
Q psy17058 147 ITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG 226 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~ 226 (471)
.+++|.+.|.|.+.+..+. ......+.|. .++....+.+|+.++|.|.+ .+ +...+.|+|........
T Consensus 3 ~~~~~~~~y~~~~~~~~g~-~~~~~~~~v~---------~~p~~v~v~~G~~v~L~C~~-~~-~~~~v~W~k~~~~~~~~ 70 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGG-SGGGGGMKVI---------QTPRYLVKGQGQKAKMRCIP-EK-GHPVVFWYQQNKNNEFK 70 (270)
T ss_dssp --------------------------CCCE---------EECSEEEEETTSCEEEEEEC-CT-TCCEEEEEEECTTCCEE
T ss_pred chhhhHHHHHHHHhccCCc-cccccceeEE---------eCCCeEEEcCCCCEEEEEEe-cC-CCceEEEEEECCCCCcE
Confidence 4578999999999887655 3222222222 12334578899999999998 33 67899999843221100
Q ss_pred ------C------------CceEEe---eeceEEEeccCCCCCeEEEEEEEcCCC----ceEEEEEEEEEe------CCc
Q psy17058 227 ------P------------DVEVYQ---ELGVLRFNNIATGDEGKYTCIAENSAG----KEVMNAYIHVLT------LPA 275 (471)
Q Consensus 227 ------~------------~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~V~~------~p~ 275 (471)
. ++.+.. ....|.|.+++.+|+|.|.|.+.+... .......|.|.. +|.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~ 150 (270)
T 3qib_D 71 FLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPE 150 (270)
T ss_dssp EEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCE
T ss_pred EEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCc
Confidence 0 222221 134799999999999999999986432 222345677765 455
Q ss_pred eeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccCCCcccc-------------cccCceeEEEEeecCCCC-
Q psy17058 276 VTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPFDRNLER-------------DELTSRAVYTIASVRESD- 339 (471)
Q Consensus 276 ~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~~~~~~~-------------~~~~~~~~l~i~~~~~~d- 339 (471)
+.+.+.....+..|+.++|.|.+.| .|.+ .+.|+++|..+...... ......+.|.|.....+|
T Consensus 151 v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 230 (270)
T 3qib_D 151 VAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNP 230 (270)
T ss_dssp EEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHST
T ss_pred eEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccC
Confidence 5443332234456999999999998 6666 89999999887543211 111223567888887777
Q ss_pred CeEEEEEEEcCCCceE
Q psy17058 340 AGQYKCIGKNSAGTEE 355 (471)
Q Consensus 340 ~G~Y~C~a~n~~g~~~ 355 (471)
.|.|+|.|.|......
T Consensus 231 ~g~YtC~v~~~~l~~~ 246 (270)
T 3qib_D 231 RNHFRCQVQFYGLSEN 246 (270)
T ss_dssp TCEEEEEEEECCBCTT
T ss_pred CCeEEEEEEecCCCCc
Confidence 9999999999866543
No 262
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.76 E-value=1.1e-17 Score=150.20 Aligned_cols=175 Identities=16% Similarity=0.282 Sum_probs=118.6
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCCCC-------------------cCCCceEEee----eceEEEeccC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDNDGK-------------------FGPDVEVYQE----LGVLRFNNIA 244 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~~~-------------------~~~~~~~~~~----~~~l~i~~~~ 244 (471)
...+.+|++++|.|.+ .+.+ .+.+.|+|...... ...++.+... ...|.|.+++
T Consensus 11 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 11 LELVKPGASVKISCKT-SGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred ceEEcCCCCEEEEEEE-ecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 3467899999999998 5544 57999998432211 1233333321 2349999999
Q ss_pred CCCCeEEEEEEEcC----CCceEEEEEEEEEe----------------CCceeeCCCccEEecCCCcEEEEEEEeecCCC
Q psy17058 245 TGDEGKYTCIAENS----AGKEVMNAYIHVLT----------------LPAVTITPSEYVSVRPGEPLTLECEATGRPMP 304 (471)
Q Consensus 245 ~~d~G~Y~C~~~~~----~~~~~~~~~l~V~~----------------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~ 304 (471)
.+|+|.|.|.+.+. .+.....+.|.|.. ++.+...+ ....+.+|++++|.|.+.+.|.+
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~G~~v~L~C~~~~~~~~ 168 (256)
T 3umt_A 90 SEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSP-SSLSASLGERVSITCRASQDIGS 168 (256)
T ss_dssp GGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEEC-SEEEECTTCCEEEEEEESSCCTT
T ss_pred cccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCC-CeEEEECCCCEEEEEEEecCCCc
Confidence 99999999999886 22233445677764 44444443 34688999999999999998888
Q ss_pred eEEEEeCC--ccCC--------------CcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCce-EEEEEEEEecCC
Q psy17058 305 TVSWVKYI--APFD--------------RNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE-EKVITVAVEHRP 366 (471)
Q Consensus 305 ~i~W~~~~--~~~~--------------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p 366 (471)
.+.|++.. ..+. ............+|+|.+++.+|+|.|+|.|.|..+.. .....|.|...+
T Consensus 169 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~ 247 (256)
T 3umt_A 169 NLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAA 247 (256)
T ss_dssp CEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred EEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCC
Confidence 99999853 2211 01111122345679999999999999999999965433 334678887654
No 263
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.76 E-value=1.1e-17 Score=145.86 Aligned_cols=168 Identities=15% Similarity=0.166 Sum_probs=116.9
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC--------------cCCCceEEe--eeceEEEeccCCCCCeEEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK--------------FGPDVEVYQ--ELGVLRFNNIATGDEGKYT 252 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~--------------~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~ 252 (471)
....+.+|+.++|.|.+ .+.|.+.+.|+|.+.... ...++.+.. ....|.|.+++.+|+|.|+
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (213)
T 3r06_A 9 SSLPASLGDRVTINCQA-SQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYY 87 (213)
T ss_dssp SEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEE
T ss_pred CEEEecCCCcEEEEEEe-CCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEE
Confidence 35578899999999999 666889999998542211 123333332 2347999999999999999
Q ss_pred EEEEcCCCc-eEEEEEEEE---EeCCceeeCCCccEEecCCCcEEEEEEEeecCC--CeEEEEeCCccCCCcc-------
Q psy17058 253 CIAENSAGK-EVMNAYIHV---LTLPAVTITPSEYVSVRPGEPLTLECEATGRPM--PTVSWVKYIAPFDRNL------- 319 (471)
Q Consensus 253 C~~~~~~~~-~~~~~~l~V---~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~i~W~~~~~~~~~~~------- 319 (471)
|.+.+..+. ......|.| ..+|.+.+.+.. ..+..|+.+.|.|.+.|.++ +.+.|++++..+....
T Consensus 88 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 166 (213)
T 3r06_A 88 CQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPS-SEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQ 166 (213)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCC
T ss_pred EecccCCceEEcCCceEEEeccCCCceeeeeCCC-ceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCce
Confidence 999887542 233455666 456666655432 23456888999999998654 3899999998875421
Q ss_pred --cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEE
Q psy17058 320 --ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVI 358 (471)
Q Consensus 320 --~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 358 (471)
........+.|.|.....+|+|.|+|.|.|.........
T Consensus 167 ~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~~~~ 207 (213)
T 3r06_A 167 DSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAAIVK 207 (213)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEE
T ss_pred eCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcceEE
Confidence 001112235788888888999999999999876554333
No 264
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.75 E-value=1.5e-17 Score=145.90 Aligned_cols=172 Identities=17% Similarity=0.263 Sum_probs=115.8
Q ss_pred CCceeecCCCcEEEEee-CCCCCC---eEEEEeCCCCCCC-----------------C-------C-----cccCcEEEE
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDPSA---TIKWSKDNQEQLP-----------------P-------N-----MIAGETLII 144 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p~~---~v~W~~~~~~~~~-----------------~-------~-----~~~~~~L~i 144 (471)
|+++.+.+|++|+|.|. .+.+.+ .|.|+|+++..+. . . ...+.+|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 44678899999999999 655554 4899998543210 0 0 003467999
Q ss_pred cCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC
Q psy17058 145 NGITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK 224 (471)
Q Consensus 145 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~ 224 (471)
.+++.+|+|.|+|.+.+..+........+.+. .+|.....+. ......++.+.+.|.+..+.|.+.+.|++++..+.
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~ 164 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVI--AQPENHAEAQ-EVTIGPQSVAVARCVSTGGRPPARITWISSLGGEA 164 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE--BCCEEEEEEC-CBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEE
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeee--cCCceeeccc-ceeecceeeeeeeeeecCCCCCCEEEEEECCcccc
Confidence 99999999999999998776533333333333 3444433333 22455778888888776778999999999877633
Q ss_pred cCCCceE-----EeeeceEEEeccCCCCCeEEEEEEEcCCCce--EEEEEEEEEe
Q psy17058 225 FGPDVEV-----YQELGVLRFNNIATGDEGKYTCIAENSAGKE--VMNAYIHVLT 272 (471)
Q Consensus 225 ~~~~~~~-----~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~V~~ 272 (471)
....... ....+.|.|.++..+|+|.|+|.|.|..+.. ..++.|.|++
T Consensus 165 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 165 KDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp EEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred CCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 2111111 1113469999999999999999999987764 4445555543
No 265
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.75 E-value=5.1e-19 Score=154.22 Aligned_cols=167 Identities=19% Similarity=0.289 Sum_probs=115.5
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc--------------CCCceEEee--eceEEEeccCCCCCeEE
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF--------------GPDVEVYQE--LGVLRFNNIATGDEGKY 251 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~--------------~~~~~~~~~--~~~l~i~~~~~~d~G~Y 251 (471)
+....+.+|+.++|.|.+ .+.|.+.+.|+|++..... ..++.+... ...|.|.+++.+|+|.|
T Consensus 6 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 84 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSG-DQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAY 84 (212)
T ss_dssp CSEEEEETTSCCCEEEEE-TTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEE
T ss_pred CCeEEEeCCCcEEEEEec-CCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEE
Confidence 345578899999999998 6777778999986422111 234443332 34799999999999999
Q ss_pred EEEEEcCCC-ce--EEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEeec-CC-CeEEEEeCCccCCCccccc
Q psy17058 252 TCIAENSAG-KE--VMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATGR-PM-PTVSWVKYIAPFDRNLERD 322 (471)
Q Consensus 252 ~C~~~~~~~-~~--~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~i~W~~~~~~~~~~~~~~ 322 (471)
+|.+.|... .. .....|.|. .+|.+.+.+.. ..+.+|+.+.|.|.+.|. |+ +.+.|++++..+.......
T Consensus 85 ~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 163 (212)
T 1nfd_E 85 YCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPS-PEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTT 163 (212)
T ss_dssp EEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCC-HHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCC
T ss_pred EEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCc-hHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecC
Confidence 999997322 21 223456664 34555544322 234579999999999986 55 7999999998775332100
Q ss_pred ---c----cCceeEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy17058 323 ---E----LTSRAVYTIASVRESDAGQYKCIGKNSAGTEEK 356 (471)
Q Consensus 323 ---~----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 356 (471)
. ....+.|.|.++..+|+|.|+|.|.|..+..++
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (212)
T 1nfd_E 164 KPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVEK 204 (212)
T ss_dssp CCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCCC
T ss_pred CceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEEE
Confidence 0 112356889999999999999999999876443
No 266
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.75 E-value=1.2e-17 Score=141.13 Aligned_cols=155 Identities=16% Similarity=0.238 Sum_probs=110.2
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCC-CCC--------------CcCCCceEEeeeceEEEeccCCCCCeEEEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPD-NDG--------------KFGPDVEVYQELGVLRFNNIATGDEGKYTC 253 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~-~~~--------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 253 (471)
....+.+|++++|.|.+....+.+.+.|+|.+ ..+ ....++.+...++.|.|.+++..|+|.|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 34567899999999988333446799999952 211 111344442346789999999999999999
Q ss_pred EEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEE-eecCCCeEEEEeCCccCCCcccccccCceeEEEE
Q psy17058 254 IAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEA-TGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTI 332 (471)
Q Consensus 254 ~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i 332 (471)
.+.+.. .....+.|.|..++.. | .+. ..+.++.|.|.+ .| |.+.+.|++++..+. .....+|.+
T Consensus 87 ~v~~~~-~~~~~~~L~V~~~~~~---P--~i~-~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~-------~~~~~~l~~ 151 (180)
T 2dru_A 87 RMLHET-EDQWKITMEVYEMVSK---P--MIY-WECSNATLTCEVLEG-TDVELKLYQGKEHLR-------SLRQKTMSY 151 (180)
T ss_dssp EEESSS-EEEEEEEEEEECCCCC---C--EEE-EEGGGTEEEEECSSC-TTCEEEEEETTEEEE-------EESSSEEEE
T ss_pred EEEcCC-eEEEEEEEEEECCCCC---C--EEE-ecCCCEEEEEEeCCC-CCCEEEEEECCeECc-------CCCCCEEEE
Confidence 998776 5566778888764321 1 111 235679999999 66 889999999998764 122345666
Q ss_pred eecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 333 ASVRESDAGQYKCIGKNSAGTEEKVITV 360 (471)
Q Consensus 333 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 360 (471)
.. .+|+|.|+|.|.|..+..+....+
T Consensus 152 ~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 152 QW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp EC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred EE--hhcCccEEEEEecCcCccccceeE
Confidence 33 789999999999999988766544
No 267
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.75 E-value=7.5e-18 Score=146.57 Aligned_cols=165 Identities=18% Similarity=0.255 Sum_probs=114.0
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCCCC------------------cCCCceEEee----eceEEEeccCC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDNDGK------------------FGPDVEVYQE----LGVLRFNNIAT 245 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~~~------------------~~~~~~~~~~----~~~l~i~~~~~ 245 (471)
...+.+|++++|.|.+ .+.+ .+.+.|+|++.... ...++.+..+ ...|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 87 (210)
T 3d9a_H 9 PSLVKPSQTLSLTCSV-TGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTT 87 (210)
T ss_dssp CSEECTTSCEEEEEEE-ESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CEEecCCCcEEEEEEE-ecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCc
Confidence 4467899999999999 5544 47899998642111 1234444432 23799999999
Q ss_pred CCCeEEEEEEEcCCCceEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeCCccCCCcc
Q psy17058 246 GDEGKYTCIAENSAGKEVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKYIAPFDRNL 319 (471)
Q Consensus 246 ~d~G~Y~C~~~~~~~~~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~~~~~~~~~ 319 (471)
+|+|.|.|.+.+.. .......|.|.. +|.+...+.. ..+.+|+.+.|.|.+.|. |.+ .+.|++++..+....
T Consensus 88 ~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 165 (210)
T 3d9a_H 88 EDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHT 165 (210)
T ss_dssp GGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCT-TSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred ccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCC-cccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEE
Confidence 99999999998863 222234566652 3555443322 245789999999999986 888 999999987643110
Q ss_pred --cc---cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEE
Q psy17058 320 --ER---DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVI 358 (471)
Q Consensus 320 --~~---~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 358 (471)
.. ......+.|.|..+..+| |.|+|.|.|..|......
T Consensus 166 ~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 208 (210)
T 3d9a_H 166 FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 208 (210)
T ss_dssp CCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccccc
Confidence 00 111234678999988877 999999999999876544
No 268
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.75 E-value=9.6e-18 Score=150.42 Aligned_cols=176 Identities=16% Similarity=0.265 Sum_probs=119.0
Q ss_pred CceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCC--CC-----------------CcCCCceEEee----eceEEEecc
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDN--DG-----------------KFGPDVEVYQE----LGVLRFNNI 243 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~--~~-----------------~~~~~~~~~~~----~~~l~i~~~ 243 (471)
....+.+|++++|.|.+ .+.+ .+.+.|+|... .. ....++.+... ...|.|.++
T Consensus 9 ~~~~v~~G~~v~L~C~~-~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 87 (253)
T 3uzq_A 9 GAELVKPGASVRLSCTA-SGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSL 87 (253)
T ss_dssp CCEEECTTCCEEEEEEE-CSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCeeecCCCcEEEEEEe-eCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCC
Confidence 34578899999999998 5533 67999998321 11 01233444332 224999999
Q ss_pred CCCCCeEEEEEEEcCCCce-EEEEEEEEEe---------------CCceeeCCCccEEecCCCcEEEEEEEeecCCC---
Q psy17058 244 ATGDEGKYTCIAENSAGKE-VMNAYIHVLT---------------LPAVTITPSEYVSVRPGEPLTLECEATGRPMP--- 304 (471)
Q Consensus 244 ~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~---------------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~--- 304 (471)
+.+|+|.|.|.+.|..+.. .....|.|.. ++.+...+ ....+.+|++++|.|.+.+.+.+
T Consensus 88 ~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~ 166 (253)
T 3uzq_A 88 TSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTP-ASLAVSLGQRATISCRASENVDRYGN 166 (253)
T ss_dssp CGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEEC-SEEEECTTSCEEEEEEESSCCEETTE
T ss_pred CcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcC-CeEEEeCCCCEEEEEEecCccccCCC
Confidence 9999999999999865443 3345666663 34444443 34688999999999999988876
Q ss_pred -eEEEEeCC--ccCC--------------CcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCce-EEEEEEEEecCC
Q psy17058 305 -TVSWVKYI--APFD--------------RNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE-EKVITVAVEHRP 366 (471)
Q Consensus 305 -~i~W~~~~--~~~~--------------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p 366 (471)
.+.|+++. ..+. ............+|.|.+++.+|+|.|+|.|.|..+.. .....|.|...+
T Consensus 167 ~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~ 246 (253)
T 3uzq_A 167 SFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRPL 246 (253)
T ss_dssp ECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC-
T ss_pred cEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCCC
Confidence 89999853 2221 01111112345679999999999999999999975433 334667777664
No 269
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.75 E-value=2.5e-17 Score=150.21 Aligned_cols=174 Identities=16% Similarity=0.284 Sum_probs=118.4
Q ss_pred CceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCCCC-------------------cCCCceEEee----eceEEEecc
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDNDGK-------------------FGPDVEVYQE----LGVLRFNNI 243 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~~~-------------------~~~~~~~~~~----~~~l~i~~~ 243 (471)
....+.+|++++|.|.+ .+.+ .+.+.|+|++.... ...++.+... ...|.|.++
T Consensus 34 ~~~~v~~G~~v~L~C~~-~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 112 (282)
T 1qok_A 34 GAELVRSGTSVKLSCTA-SGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSL 112 (282)
T ss_dssp CCEEEETTCCEEEEEEE-ESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEeCCCeEEEEEec-cCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcC
Confidence 35678899999999998 5554 57899999753211 1234444331 357999999
Q ss_pred CCCCCeEEEEEEEcCCC---c--eEEEEEEEEEeCC---------------ceeeCCCccEEecCCCcEEEEEEEeecCC
Q psy17058 244 ATGDEGKYTCIAENSAG---K--EVMNAYIHVLTLP---------------AVTITPSEYVSVRPGEPLTLECEATGRPM 303 (471)
Q Consensus 244 ~~~d~G~Y~C~~~~~~~---~--~~~~~~l~V~~~p---------------~~~~~~~~~~~~~~g~~v~l~C~~~g~p~ 303 (471)
+.+|+|.|.|.+.|..+ . ....+.|.|...| .+... +....+.+|++++|.|.+.+.|
T Consensus 113 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~v~~G~~v~L~C~~~~~~- 190 (282)
T 1qok_A 113 TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQS-PAIMSASPGEKVTITCSASSSV- 190 (282)
T ss_dssp CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEE-CSEEEECTTCCEEEEEEESSCC-
T ss_pred ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecC-CCEEEEcCCCcEEEEEEecCCC-
Confidence 99999999999998865 1 1133467777543 22222 2345789999999999999988
Q ss_pred CeEEEEe--CCccCCC--------------cccccccCceeEEEEeecCCCCCeEEEEEEEcCCCce-EEEEEEEEecC
Q psy17058 304 PTVSWVK--YIAPFDR--------------NLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE-EKVITVAVEHR 365 (471)
Q Consensus 304 ~~i~W~~--~~~~~~~--------------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~ 365 (471)
+.+.|+| ++..+.. ...........+|+|.+++.+|+|.|+|.|.|..+.. .....|.|...
T Consensus 191 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 269 (282)
T 1qok_A 191 SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKRA 269 (282)
T ss_dssp SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEecc
Confidence 8999999 5554420 0110112345689999999999999999999864322 33466777643
No 270
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.75 E-value=4.9e-17 Score=146.60 Aligned_cols=168 Identities=16% Similarity=0.364 Sum_probs=114.6
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCC------CCeEEEEeCC-CCCC--------------CCCcc-----cCcEE
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDP------SATIKWSKDN-QEQL--------------PPNMI-----AGETL 142 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p------~~~v~W~~~~-~~~~--------------~~~~~-----~~~~L 142 (471)
..+.+...|..+.+.+|++++|.|. .+.+ .+.+.|+|+. +..+ ..+.. ....|
T Consensus 4 ~~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L 83 (264)
T 2gjj_A 4 ADIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTL 83 (264)
T ss_dssp CCCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEE
T ss_pred cccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEE
Confidence 3567777888999999999999999 6665 6789999963 2111 11211 23489
Q ss_pred EEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeecc----------------CCeeeecCCCceeEEcCCeEEEEEEcc
Q psy17058 143 IINGITKADEGVYICSIQNAQGNVFQDYASIQVDKRE----------------MPRIRIHPNASQTFIVGDRADIQCVLE 206 (471)
Q Consensus 143 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~----------------~p~~~~~~~~~~~v~~g~~~~L~C~~~ 206 (471)
+|.+++.+|+|.|.|.+.+..+........|.|.... .|.+.+.......+.+|++++|.|.+
T Consensus 84 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~- 162 (264)
T 2gjj_A 84 TIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKA- 162 (264)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEE-
T ss_pred EECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEE-
Confidence 9999999999999999988654322334556665321 12232322233468899999999999
Q ss_pred CCCC--CCeEEEEeCCC--CCCc-----------------CCCceEEe----eeceEEEeccCCCCCeEEEEEEEcC
Q psy17058 207 AGEP--SPTQTWIRPDN--DGKF-----------------GPDVEVYQ----ELGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 207 ~~~p--~~~v~W~~~~~--~~~~-----------------~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
.+.+ .+.+.|+|+.. .... ..++.+.. ....|.|.+++.+|+|.|+|.+.|.
T Consensus 163 ~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 163 SGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp ESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred eCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 4454 37999999742 2110 12333321 1347999999999999999999985
No 271
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.75 E-value=6.4e-19 Score=153.57 Aligned_cols=163 Identities=20% Similarity=0.384 Sum_probs=111.9
Q ss_pred CCceeecCCCcEEEEee-CCCCCCeEEEEeCC-CCCC--------------CCCcc-----cCcEEEEcCCCCCCCeEEE
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDPSATIKWSKDN-QEQL--------------PPNMI-----AGETLIINGITKADEGVYI 156 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~-~~~~--------------~~~~~-----~~~~L~i~~v~~~D~G~Y~ 156 (471)
|..+.+.+|++++|.|. .+.+.+.+.|+|++ +..+ ..+.. ....|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 77889999999999999 77777789999863 2211 11211 2348999999999999999
Q ss_pred EEEEecCCc--eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCcCCCce-
Q psy17058 157 CSIQNAQGN--VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKFGPDVE- 230 (471)
Q Consensus 157 C~~~~~~~~--~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~~~~~~- 230 (471)
|.+.|.... .......+.|.. ..+|.+.+.+.. ..+.+|+.++|.|.+....|. +.++|++++..+.......
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~ 164 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPS-PEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTK 164 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCC-HHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCC
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCc-hHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCC
Confidence 999973222 112234455532 245666554432 234579999999999444455 7999999986643221100
Q ss_pred E------EeeeceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 231 V------YQELGVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 231 ~------~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
. ....+.|.|.++..+|+|.|+|.|.|....
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 165 PSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp CBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred ceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 0 122356899999999999999999998765
No 272
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.75 E-value=2.7e-17 Score=149.46 Aligned_cols=177 Identities=19% Similarity=0.222 Sum_probs=116.2
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC--------------cCCCceEEee--eceEEEeccCCCCCeEEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK--------------FGPDVEVYQE--LGVLRFNNIATGDEGKYT 252 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~--------------~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~ 252 (471)
....+.+|++++|.|.+ .+.|.+.+.|+|++.... ...++.+... ...|.|.+++.+|+|.|.
T Consensus 20 ~~~~v~~G~~v~L~C~~-~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 98 (276)
T 3auv_A 20 SSLSASVGDRVTITCRA-SQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYY 98 (276)
T ss_dssp SEEECCTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CeEEEcCCCCEEEEeEc-CCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEE
Confidence 35567899999999999 677888999999753210 1223443321 237999999999999999
Q ss_pred EEEEcCCCc-eEEEEEEEEEeCC-------------ceeeCCCccEEecCCCcEEEEEEEeecC--CCeEEEEeCCc--c
Q psy17058 253 CIAENSAGK-EVMNAYIHVLTLP-------------AVTITPSEYVSVRPGEPLTLECEATGRP--MPTVSWVKYIA--P 314 (471)
Q Consensus 253 C~~~~~~~~-~~~~~~l~V~~~p-------------~~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~i~W~~~~~--~ 314 (471)
|.+.|..+. ......|.|...| .+.+..+....+.+|++++|.|.+.+.| .+.+.|++++. .
T Consensus 99 C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~ 178 (276)
T 3auv_A 99 CQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKC 178 (276)
T ss_dssp EEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCC
T ss_pred EEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCC
Confidence 999986543 2223456665542 2333323456889999999999999876 47999999642 1
Q ss_pred CC-------------------Cccccc--ccCceeEEEEeecCCCCCeEEEEEEEcCC---Cc--eEEEEEEEEecCC
Q psy17058 315 FD-------------------RNLERD--ELTSRAVYTIASVRESDAGQYKCIGKNSA---GT--EEKVITVAVEHRP 366 (471)
Q Consensus 315 ~~-------------------~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~---g~--~~~~~~l~V~~~p 366 (471)
.. ...... ......+|.|.+++.+|+|.|+|.|.|.. +. ......|.|...+
T Consensus 179 ~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~~ 256 (276)
T 3auv_A 179 LEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSAS 256 (276)
T ss_dssp EEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC---
T ss_pred cEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEEEEEcccc
Confidence 10 000000 01234589999999999999999999983 21 1233567776543
No 273
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.75 E-value=1.5e-17 Score=146.44 Aligned_cols=175 Identities=15% Similarity=0.209 Sum_probs=115.9
Q ss_pred CceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCCCC-------------------cCCCceEEe----eeceEEEecc
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDNDGK-------------------FGPDVEVYQ----ELGVLRFNNI 243 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~~~-------------------~~~~~~~~~----~~~~l~i~~~ 243 (471)
....+.+|++++|.|.+ .+.+ ...+.|+|++.... ...++.+.. ....|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (227)
T 1mju_H 8 GAELVKPGASVKLSCKA-SGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (227)
T ss_dssp SEEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCeEEcCCCCEEEEEEe-cCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC
Confidence 34567899999999999 5555 57899999752111 123444432 1357999999
Q ss_pred CCCCCeEEEEEEEcCCCc-eEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeCCccCC
Q psy17058 244 ATGDEGKYTCIAENSAGK-EVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKYIAPFD 316 (471)
Q Consensus 244 ~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~~~~~~ 316 (471)
+.+|+|.|.|.+.+.... ....+.|.|.. +|.+.+.... ..+.+|+.++|.|.+.|. |.+ .+.|++++..+.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 165 (227)
T 1mju_H 87 TSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPV-CGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSG 165 (227)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCC-C------CEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred CcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCC-ccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCC
Confidence 999999999999886321 12234677764 3444433221 245689999999999985 776 999999987653
Q ss_pred Ccc--c-c--cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 317 RNL--E-R--DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 317 ~~~--~-~--~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
... . . ......+.|.|..+..+| |.|+|.|.|..+.......+.+..+|
T Consensus 166 ~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p 219 (227)
T 1mju_H 166 VHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPT 219 (227)
T ss_dssp EEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC-
T ss_pred cEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCC
Confidence 110 0 0 112234678999988888 99999999988877777777666554
No 274
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.75 E-value=2.9e-17 Score=147.63 Aligned_cols=163 Identities=13% Similarity=0.217 Sum_probs=108.0
Q ss_pred EEcCCceeecCCCcEEEEee-CC--CCCCeEEEEeCCCCCC-------------------CCCcc-------cCcEEEEc
Q psy17058 95 QVTPRQQSAPEGSQVTIECK-SN--DPSATIKWSKDNQEQL-------------------PPNMI-------AGETLIIN 145 (471)
Q Consensus 95 ~~~p~~~~v~~G~~v~l~C~-~~--~p~~~v~W~~~~~~~~-------------------~~~~~-------~~~~L~i~ 145 (471)
...|.+..+.+|++|+|.|. .+ .+.+.+.|+|...... ..+.. ...+|.|.
T Consensus 12 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 91 (257)
T 3gkz_A 12 LQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLK 91 (257)
T ss_dssp EEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred EECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEEC
Confidence 34566788999999999999 44 3578999999521110 11111 12379999
Q ss_pred CCCCCCCeEEEEEEEecCCc---eeeeeEEEEEeec------------cCCeeeecCCCceeEEcCCeEEEEEEccCCCC
Q psy17058 146 GITKADEGVYICSIQNAQGN---VFQDYASIQVDKR------------EMPRIRIHPNASQTFIVGDRADIQCVLEAGEP 210 (471)
Q Consensus 146 ~v~~~D~G~Y~C~~~~~~~~---~~~~~~~l~v~~~------------~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p 210 (471)
+++.+|+|.|.|.+.+..+. .......|.|... ..+.+ ...+....+.+|+.++|.|.+ .+.+
T Consensus 92 ~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~G~~v~L~C~~-~~~~ 169 (257)
T 3gkz_A 92 SVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVL-TQSPAIMSASPGEKVTLTCSA-SSSV 169 (257)
T ss_dssp SCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCE-ECSCSEEEECTTCCEEEEEEE-SSCC
T ss_pred CCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEE-EcCCceEEEeCCCcEEEEEEE-ccCc
Confidence 99999999999999986211 1233445666533 12333 333345678899999999999 5566
Q ss_pred CC-eEEEEeCC--CCCCc------------CCCceEEee--eceEEEeccCCCCCeEEEEEEEcCC
Q psy17058 211 SP-TQTWIRPD--NDGKF------------GPDVEVYQE--LGVLRFNNIATGDEGKYTCIAENSA 259 (471)
Q Consensus 211 ~~-~v~W~~~~--~~~~~------------~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~ 259 (471)
.+ .+.|+|.. ..... ..++..... ...|.|.+++.+|+|.|.|.+.+..
T Consensus 170 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 235 (257)
T 3gkz_A 170 SSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSF 235 (257)
T ss_dssp CGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred cceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCC
Confidence 66 99999853 22110 123332221 2359999999999999999998753
No 275
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.75 E-value=2.6e-17 Score=147.86 Aligned_cols=175 Identities=17% Similarity=0.262 Sum_probs=113.8
Q ss_pred cCCceeecCCCcEEEEee-CCCC--CCeEEEEeCCCCCC--------------------CCCcc-------cCcEEEEcC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQEQL--------------------PPNMI-------AGETLIING 146 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~~~~--------------------~~~~~-------~~~~L~i~~ 146 (471)
+|....+.+|++|+|.|. .+.+ .+.+.|++...... ..+.. ...+|.|.+
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 87 (256)
T 3umt_A 8 QSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRS 87 (256)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred ccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECC
Confidence 345677999999999999 5544 67899998521111 01111 233599999
Q ss_pred CCCCCCeEEEEEEEecCC---ceeeeeEEEEEeec--------------cCCeeeecCCCceeEEcCCeEEEEEEccCCC
Q psy17058 147 ITKADEGVYICSIQNAQG---NVFQDYASIQVDKR--------------EMPRIRIHPNASQTFIVGDRADIQCVLEAGE 209 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~---~~~~~~~~l~v~~~--------------~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~ 209 (471)
++.+|+|.|.|.+.+... ........|.|... .+|.+... +....+.+|++++|.|.+ .+.
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~v~~G~~v~L~C~~-~~~ 165 (256)
T 3umt_A 88 LTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQS-PSSLSASLGERVSITCRA-SQD 165 (256)
T ss_dssp CCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEE-CSEEEECTTCCEEEEEEE-SSC
T ss_pred CCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcC-CCeEEEECCCCEEEEEEE-ecC
Confidence 999999999999988621 11333455666531 13444333 345678899999999999 667
Q ss_pred CCCeEEEEeCCC--CCC------------cCCCceEEee--eceEEEeccCCCCCeEEEEEEEcCCCce-EEEEEEEEEe
Q psy17058 210 PSPTQTWIRPDN--DGK------------FGPDVEVYQE--LGVLRFNNIATGDEGKYTCIAENSAGKE-VMNAYIHVLT 272 (471)
Q Consensus 210 p~~~v~W~~~~~--~~~------------~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~ 272 (471)
+.+.+.|+|... ... ...++..... ...|.|.+++.+|+|.|+|.+.+..... .....|.|..
T Consensus 166 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~ 245 (256)
T 3umt_A 166 IGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKR 245 (256)
T ss_dssp CTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEEC
Confidence 777999999532 111 1233333221 2359999999999999999998854332 2335566654
Q ss_pred C
Q psy17058 273 L 273 (471)
Q Consensus 273 ~ 273 (471)
.
T Consensus 246 ~ 246 (256)
T 3umt_A 246 A 246 (256)
T ss_dssp -
T ss_pred C
Confidence 3
No 276
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.75 E-value=1.8e-18 Score=153.12 Aligned_cols=170 Identities=19% Similarity=0.360 Sum_probs=98.3
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCC-C--------------CCCcc-----cCcEEEEcCCC
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQ-L--------------PPNMI-----AGETLIINGIT 148 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~-~--------------~~~~~-----~~~~L~i~~v~ 148 (471)
..+.+...|..+.+.+|++++|.|. .+.+.+.+.|+|++... . ..+.. ...+|.|.+++
T Consensus 22 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 101 (233)
T 3bqu_C 22 AETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENML 101 (233)
T ss_dssp -CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----
T ss_pred cceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCC
Confidence 4566777788899999999999999 66666789999963211 1 11111 22379999999
Q ss_pred CCCCeEEEEEEEecCCceeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCCCcC
Q psy17058 149 KADEGVYICSIQNAQGNVFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDGKFG 226 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~~~~ 226 (471)
.+|+|.|.|.+.+..+........+.|... .+|.+.+.+... .+.+|+.++|.|.+....|.+ .++|+|++..+...
T Consensus 102 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 180 (233)
T 3bqu_C 102 SEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 180 (233)
T ss_dssp CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CC
T ss_pred HHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCH-HhhcCCceEEEEEEccccCCceEEEEEECCeeCCCC
Confidence 999999999998865532222334555432 256666544432 234799999999994435553 89999998765433
Q ss_pred -CC--------ceEEeeeceEEEeccCCCCCeEEEEEEEcCCC
Q psy17058 227 -PD--------VEVYQELGVLRFNNIATGDEGKYTCIAENSAG 260 (471)
Q Consensus 227 -~~--------~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 260 (471)
.. .......+.|.|.....+|+|.|+|.|.|...
T Consensus 181 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 181 VLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred ceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 00 00111234688999999999999999998654
No 277
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.75 E-value=1.7e-17 Score=145.36 Aligned_cols=167 Identities=20% Similarity=0.286 Sum_probs=115.7
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCCCC---------------------cCCCceEEee----eceEEEec
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDNDGK---------------------FGPDVEVYQE----LGVLRFNN 242 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~~~---------------------~~~~~~~~~~----~~~l~i~~ 242 (471)
...+.+|++++|.|.+ .+.+ .+.+.|+|++.... ...++.+..+ ...|.|.+
T Consensus 9 ~~~~~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (220)
T 1pz5_B 9 GGLVQPGGSMKLSCVA-SGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNN 87 (220)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred CEEEcCCCeEEEEEEE-cCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEcc
Confidence 4567899999999999 5444 67999999642100 0234444321 23799999
Q ss_pred cCCCCCeEEEEEEEcCCCce-E--EEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeCCc
Q psy17058 243 IATGDEGKYTCIAENSAGKE-V--MNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKYIA 313 (471)
Q Consensus 243 ~~~~d~G~Y~C~~~~~~~~~-~--~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~~~ 313 (471)
++.+|+|.|.|.+.+..+.. . ..+.|.|.. +|.+...+.. ..+.+|+.+.|.|.+.|. |.| .+.|++++.
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 88 LRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPG-CSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp CCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCC-SCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccc-cccCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 99999999999999875321 1 345666652 4554443322 245789999999999986 888 999999887
Q ss_pred cCC-----CcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 314 PFD-----RNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVIT 359 (471)
Q Consensus 314 ~~~-----~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 359 (471)
... ...........+.|.|.....+| |.|+|.|.|..|..++++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 167 SSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred ccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 421 10000122235678999988877 9999999999998776654
No 278
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.74 E-value=2.7e-17 Score=147.63 Aligned_cols=171 Identities=18% Similarity=0.281 Sum_probs=114.1
Q ss_pred cCCceeecCCCcEEEEee-CCCC--CCeEEEEeCC-CCCC-------------------CCCcc-------cCcEEEEcC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDN-QEQL-------------------PPNMI-------AGETLIING 146 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~-~~~~-------------------~~~~~-------~~~~L~i~~ 146 (471)
.|..+.+.+|++++|.|. .+.+ .+.+.|+|++ +..+ ..+.. ...+|+|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 466788999999999999 6554 6789999952 1111 11111 134899999
Q ss_pred CCCCCCeEEEEEEEecCCc----eeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-----eEEEE
Q psy17058 147 ITKADEGVYICSIQNAQGN----VFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-----TQTWI 217 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~~----~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-----~v~W~ 217 (471)
++.+|+|.|+|.+.+..+. .......|.|. ..|.+...+ ....+.+|++++|.|.+ .+.|.+ .+.|+
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~--~~~~v~~~p-~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~ 161 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS--SDIELTQTP-LSLPVSLGDQASISCRS-SQSIVHSNGNTYLEWY 161 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC--CCCCEEEEC-SEEEECTTCCEEEEEEE-SSCCBCTTSCBCEEEE
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeec--ccccEEecC-cEEEEecCCcEEEEeEe-cCcccccccceEEEEE
Confidence 9999999999999987541 12223344443 445444333 44568899999999999 555544 99999
Q ss_pred e--CCCCCC------------cCCCceEEe--eeceEEEeccCCCCCeEEEEEEEcCCCc-eEEEEEEEEE
Q psy17058 218 R--PDNDGK------------FGPDVEVYQ--ELGVLRFNNIATGDEGKYTCIAENSAGK-EVMNAYIHVL 271 (471)
Q Consensus 218 ~--~~~~~~------------~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~V~ 271 (471)
| ++..+. ...++.... ....|.|.+++.+|+|.|+|.+.+.... ......|.|.
T Consensus 162 k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 162 LQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp EECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEE
Confidence 9 454321 022333322 2347999999999999999999875432 2223455554
No 279
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.74 E-value=5.1e-17 Score=145.95 Aligned_cols=168 Identities=14% Similarity=0.249 Sum_probs=113.1
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CC--CCCCeEEEEeCCCCC-C-------------------CCCcc-------cC
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SN--DPSATIKWSKDNQEQ-L-------------------PPNMI-------AG 139 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~--~p~~~v~W~~~~~~~-~-------------------~~~~~-------~~ 139 (471)
.++.+...+..+.+.+|++|+|.|. .+ .+.+.+.|+|..... . ..+.. ..
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 4667777888999999999999999 44 367789999852111 0 11111 12
Q ss_pred cEEEEcCCCCCCCeEEEEEEEec-----------CCceeeeeEEEEEeecc-------------CCeeeecCCCceeEEc
Q psy17058 140 ETLIINGITKADEGVYICSIQNA-----------QGNVFQDYASIQVDKRE-------------MPRIRIHPNASQTFIV 195 (471)
Q Consensus 140 ~~L~i~~v~~~D~G~Y~C~~~~~-----------~~~~~~~~~~l~v~~~~-------------~p~~~~~~~~~~~v~~ 195 (471)
.+|+|.+++.+|+|.|.|.+.+. ..........|.|.... ++.+. ..+....+.+
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~ 163 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLT-QAPGTLSLSP 163 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEE-EECSEEEECT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEE-ecCCeEEEeC
Confidence 36999999999999999999886 12213334556665321 22333 3344567889
Q ss_pred CCeEEEEEEccCCCCC-CeEEEEeCC--CCCC------------cCCCceEEee--eceEEEeccCCCCCeEEEEEEEcC
Q psy17058 196 GDRADIQCVLEAGEPS-PTQTWIRPD--NDGK------------FGPDVEVYQE--LGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 196 g~~~~L~C~~~~~~p~-~~v~W~~~~--~~~~------------~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
|++++|.|.+ .+.+. +.+.|+|.. .... ...++.+... ...|.|.+++.+|+|.|.|.+.|.
T Consensus 164 G~~v~L~C~~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 242 (256)
T 3juy_B 164 GERATFSCRS-SHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGA 242 (256)
T ss_dssp TSCEEEEEEE-SSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCS
T ss_pred CCCEEEEEEE-CCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeC
Confidence 9999999999 55555 899999842 2211 1233333222 335999999999999999999875
Q ss_pred C
Q psy17058 259 A 259 (471)
Q Consensus 259 ~ 259 (471)
.
T Consensus 243 ~ 243 (256)
T 3juy_B 243 S 243 (256)
T ss_dssp S
T ss_pred C
Confidence 4
No 280
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.74 E-value=1.9e-17 Score=145.76 Aligned_cols=176 Identities=18% Similarity=0.272 Sum_probs=113.0
Q ss_pred cCCceeecCCCcEEEEee-CCCC--CCeEEEEeCCC-CCC-------------------CCCcc-------cCcEEEEcC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQ-EQL-------------------PPNMI-------AGETLIING 146 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~-~~~-------------------~~~~~-------~~~~L~i~~ 146 (471)
+|..+.+.+|++|+|.|. .+.+ .+.+.|+|++. ... ..+.. ...+|+|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSS 85 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECC
Confidence 466788999999999999 6555 67899999732 111 11111 235899999
Q ss_pred CCCCCCeEEEEEEEecCCceeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCC
Q psy17058 147 ITKADEGVYICSIQNAQGNVFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDG 223 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~ 223 (471)
++.+|+|.|.|.+.+...........|.|.. ..+|.+....+. ..+.+|+.++|.|.+....|.+ .++|++++..+
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 86 LTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPV-CGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCC-C------CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred CCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCC-ccccCCCcEEEEEEeecEeCCCeEEEEecCCCcC
Confidence 9999999999999885322122344666653 234555544332 2456899999999995445766 99999998753
Q ss_pred CcC--CCc---eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCC
Q psy17058 224 KFG--PDV---EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLP 274 (471)
Q Consensus 224 ~~~--~~~---~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p 274 (471)
... ... ..+...+.|.|..+..+| |.|+|.+.|..........+.+..+|
T Consensus 165 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p 219 (227)
T 1mju_H 165 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPT 219 (227)
T ss_dssp TEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC-
T ss_pred CcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCC
Confidence 211 110 112224578999988878 99999999977665555555544443
No 281
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.74 E-value=4.6e-18 Score=150.57 Aligned_cols=170 Identities=19% Similarity=0.261 Sum_probs=115.6
Q ss_pred CceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCCC--------------cCCCceEEe--eeceEEEeccCCCCCeEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDGK--------------FGPDVEVYQ--ELGVLRFNNIATGDEGKY 251 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~~--------------~~~~~~~~~--~~~~l~i~~~~~~d~G~Y 251 (471)
....+.+|++++|.|.+....+.+ .+.|+|++.... ...++.... ....|.|.+++.+|+|.|
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 106 (234)
T 2j6e_L 27 PSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADY 106 (234)
T ss_dssp SCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEE
T ss_pred CcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEE
Confidence 445678999999999993333334 799999742111 123333332 234799999999999999
Q ss_pred EEEEEcCCCc---eEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEeec-CC-CeEEEEeCCccCCCccc--
Q psy17058 252 TCIAENSAGK---EVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATGR-PM-PTVSWVKYIAPFDRNLE-- 320 (471)
Q Consensus 252 ~C~~~~~~~~---~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~i~W~~~~~~~~~~~~-- 320 (471)
.|.+.+..+. ....+.|.|. .+|.+.+.+... ...+|+.+.|.|.+.|. |+ +.+.|++++..+.....
T Consensus 107 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 107 YCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSS-EELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCH-HHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCCh-hHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 9999998762 2223455553 344444433221 23468899999999985 44 38999999988754311
Q ss_pred ------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 321 ------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVIT 359 (471)
Q Consensus 321 ------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 359 (471)
.......+.|.|..+..+|+|.|+|.|.|..+...+++.
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 230 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 230 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEEC
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEecc
Confidence 011223467999999999999999999999887665543
No 282
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.74 E-value=5.9e-17 Score=145.53 Aligned_cols=161 Identities=21% Similarity=0.296 Sum_probs=108.2
Q ss_pred ceeEEcCCeEEEEEEccCCC--CCCeEEEEeCCCCCC--------------cCCCceEEee--eceEEEeccCCCCCeEE
Q psy17058 190 SQTFIVGDRADIQCVLEAGE--PSPTQTWIRPDNDGK--------------FGPDVEVYQE--LGVLRFNNIATGDEGKY 251 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~--p~~~v~W~~~~~~~~--------------~~~~~~~~~~--~~~l~i~~~~~~d~G~Y 251 (471)
...+.+|++++|.|.+ .+. +.+.+.|+|.+.... ...++.+... ...|.|.+++.+|+|.|
T Consensus 11 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 11 SVSGAPGQRVTISCSG-SSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp EEEECTTCCEEEEEEC-CTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred cEEEcCCCcEEEEEec-CCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEE
Confidence 4578899999999999 444 678999998542211 1223333322 23699999999999999
Q ss_pred EEEEEcCCCc---eEEEEEEEEEeCCc-------------------eeeCCCccEEecCCCcEEEEEEEeecC--CCeEE
Q psy17058 252 TCIAENSAGK---EVMNAYIHVLTLPA-------------------VTITPSEYVSVRPGEPLTLECEATGRP--MPTVS 307 (471)
Q Consensus 252 ~C~~~~~~~~---~~~~~~l~V~~~p~-------------------~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~i~ 307 (471)
.|.+.+..+. ....+.|.|...+. +.+.......+.+|++++|.|.+.+.+ .+.+.
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 169 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMS 169 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred EEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEE
Confidence 9999986542 22335677765441 112212234688999999999999876 67999
Q ss_pred EEeCC--ccCCC-------------------ccc--ccccCceeEEEEeecCCCCCeEEEEEEEcCC
Q psy17058 308 WVKYI--APFDR-------------------NLE--RDELTSRAVYTIASVRESDAGQYKCIGKNSA 351 (471)
Q Consensus 308 W~~~~--~~~~~-------------------~~~--~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 351 (471)
|+++. ..+.. ... ........+|+|.+++.+|+|.|+|.|.|..
T Consensus 170 W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 170 WVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 99863 22210 000 0011345679999999999999999999964
No 283
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.74 E-value=1.8e-17 Score=146.99 Aligned_cols=170 Identities=15% Similarity=0.186 Sum_probs=117.5
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC--------------cCCCceEEe--eeceEEEeccCCCCCeEEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK--------------FGPDVEVYQ--ELGVLRFNNIATGDEGKYT 252 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~--------------~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~ 252 (471)
....+.+|++++|.|.+ .+.+.+.+.|+|.+.... ...++.... ....|.|.+++.+|+|.|+
T Consensus 32 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 110 (237)
T 3sob_L 32 SSLSASVGDRVTITCRA-SQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYY 110 (237)
T ss_dssp SEEEEETTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CeEEEeCCCcEEEEEec-CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEE
Confidence 34678899999999999 666888999999542211 123333332 2447999999999999999
Q ss_pred EEEEcCCCc-eEEEEEEEEE---eCCceeeCCCccEEecCCCcEEEEEEEee-cC-CCeEEEEeCCccCCCcc-------
Q psy17058 253 CIAENSAGK-EVMNAYIHVL---TLPAVTITPSEYVSVRPGEPLTLECEATG-RP-MPTVSWVKYIAPFDRNL------- 319 (471)
Q Consensus 253 C~~~~~~~~-~~~~~~l~V~---~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p-~~~i~W~~~~~~~~~~~------- 319 (471)
|.+.+..+. ......|.|. .+|.+.+.+.. ..+.+|+.+.|.|.+.+ .| .+.+.|++++..+....
T Consensus 111 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 189 (237)
T 3sob_L 111 CQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPS-DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ 189 (237)
T ss_dssp EEECSSSSCEECCCEEEEEECCCBCCEEEEECCC-HHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCC
T ss_pred EeeccCCceEEcCcEEEEEecCCCCCceEEeCCC-hhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeeccccc
Confidence 999886543 2233455553 34555443322 23345889999999998 45 47999999998876421
Q ss_pred --cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 320 --ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITV 360 (471)
Q Consensus 320 --~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 360 (471)
........+.|.|.....+|+|.|+|.|.|..........+
T Consensus 190 ~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 232 (237)
T 3sob_L 190 DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF 232 (237)
T ss_dssp CTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEEE
T ss_pred ccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceeeee
Confidence 00111224678899999999999999999998765544443
No 284
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.74 E-value=7.3e-18 Score=147.87 Aligned_cols=166 Identities=17% Similarity=0.244 Sum_probs=114.4
Q ss_pred CCceeecCCCcEEEEee-CC-CCCC----eEEEEeCCCCCC--------------CCCcc----------cCcEEEEcCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SN-DPSA----TIKWSKDNQEQL--------------PPNMI----------AGETLIINGI 147 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~-~p~~----~v~W~~~~~~~~--------------~~~~~----------~~~~L~i~~v 147 (471)
|..+.+.+|++++|.|. .+ .+.+ .+.|++++.... ..+.. ...+|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 45678999999999999 33 3433 499999843211 11111 2568999999
Q ss_pred CCCCCeEEEEEEEecC-CceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeE-EEEEEccCCCCCCeEEEEeCCCCCCc
Q psy17058 148 TKADEGVYICSIQNAQ-GNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRA-DIQCVLEAGEPSPTQTWIRPDNDGKF 225 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~-~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~-~L~C~~~~~~p~~~v~W~~~~~~~~~ 225 (471)
+.+|+|.|+|.+.+.. +. ...... +.+..+|.+...+.... .+|+.+ .|.|.+..+.|.+.++|++++.....
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~-~~~~~~--L~V~~~P~~~~~~~~~~--~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~ 160 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGS-RSVDIW--LRVLAKPQNTAEVQKVQ--LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQ 160 (221)
T ss_dssp SCCCCSCBEEEEEESSSCS-CEEECC--CCCCCCCEEEEEEECCC--CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCC
T ss_pred ChHHCeEEEEEEEeCCCCc-eEEEEE--EEEEECCCceeecCCcc--cCCceEEEEEEECCCccCCCeeEEEeCCCCCCc
Confidence 9999999999999866 43 433344 44445777665443332 578888 49999866899999999998655332
Q ss_pred CCC-----ceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 226 GPD-----VEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYI 268 (471)
Q Consensus 226 ~~~-----~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 268 (471)
... .......+.|.|.++..+|.|.|+|.|.|..+.....+.|
T Consensus 161 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v 208 (221)
T 3eow_R 161 TSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTV 208 (221)
T ss_dssp CEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEE
T ss_pred cceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEE
Confidence 211 0111124569999999999999999999987765544443
No 285
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.74 E-value=4.4e-17 Score=144.84 Aligned_cols=160 Identities=19% Similarity=0.246 Sum_probs=111.3
Q ss_pred CceeEEcCCeEEEEEEccCCCC----CCeEEEEeCCCC--CC------------cCCCceEEee--eceEEEeccCCCCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP----SPTQTWIRPDND--GK------------FGPDVEVYQE--LGVLRFNNIATGDE 248 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p----~~~v~W~~~~~~--~~------------~~~~~~~~~~--~~~l~i~~~~~~d~ 248 (471)
....+.+|+.++|.|.+ .+.| .+.+.|+|++.. .. ...++.+... ...|.|.+++.+|+
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (240)
T 1moe_A 9 ASLAVSLGQRATMSCRA-GESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDV 87 (240)
T ss_dssp SEEEECTTSCEEEEEEE-SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEecCCCCEEEEEeC-CCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhC
Confidence 44578899999999999 6666 678999996421 11 1223333321 23799999999999
Q ss_pred eEEEEEEEcCCCc-eEEEEEEEEEeCC-----ceeeCCCccEEecCCCcEEEEEEEeecCC--CeEEEEeCC--ccCC--
Q psy17058 249 GKYTCIAENSAGK-EVMNAYIHVLTLP-----AVTITPSEYVSVRPGEPLTLECEATGRPM--PTVSWVKYI--APFD-- 316 (471)
Q Consensus 249 G~Y~C~~~~~~~~-~~~~~~l~V~~~p-----~~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~i~W~~~~--~~~~-- 316 (471)
|.|+|.+.|..+. ....+.|.|...+ .+.+.......+.+|++++|.|.+.+.|. +.+.|+++. ..+.
T Consensus 88 G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~ 167 (240)
T 1moe_A 88 ATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWI 167 (240)
T ss_dssp EEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEE
T ss_pred EEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEE
Confidence 9999999987554 3344567776542 23333234567899999999999998774 589999962 2221
Q ss_pred -----------------Cccccc--ccCceeEEEEeecCCCCCeEEEEEEEc
Q psy17058 317 -----------------RNLERD--ELTSRAVYTIASVRESDAGQYKCIGKN 349 (471)
Q Consensus 317 -----------------~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~a~n 349 (471)
...... ......+|.|.+++.+|+|.|+|.|.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 168 GRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 000000 113346899999999999999999985
No 286
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.74 E-value=2e-17 Score=148.65 Aligned_cols=169 Identities=15% Similarity=0.234 Sum_probs=115.1
Q ss_pred eeecCCCceeEEcCCeEEEEEEccCC-CCCCeEEEEeCCCCCC-------------------cCCCceEEee----eceE
Q psy17058 183 IRIHPNASQTFIVGDRADIQCVLEAG-EPSPTQTWIRPDNDGK-------------------FGPDVEVYQE----LGVL 238 (471)
Q Consensus 183 ~~~~~~~~~~v~~g~~~~L~C~~~~~-~p~~~v~W~~~~~~~~-------------------~~~~~~~~~~----~~~l 238 (471)
....+.....+.+|++++|.|.+... .+.+.+.|+|...... ...++.+..+ ...|
T Consensus 8 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 87 (256)
T 3juy_B 8 VQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYM 87 (256)
T ss_dssp CEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEE
T ss_pred EEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEE
Confidence 33444556788999999999998432 3667899997432111 1234444421 2359
Q ss_pred EEeccCCCCCeEEEEEEEcC------------CCceEEEEEEEEEeC---------------CceeeCCCccEEecCCCc
Q psy17058 239 RFNNIATGDEGKYTCIAENS------------AGKEVMNAYIHVLTL---------------PAVTITPSEYVSVRPGEP 291 (471)
Q Consensus 239 ~i~~~~~~d~G~Y~C~~~~~------------~~~~~~~~~l~V~~~---------------p~~~~~~~~~~~~~~g~~ 291 (471)
.|.+++.+|+|.|.|.+.+. .........|.|... +.+... .....+.+|++
T Consensus 88 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~ 166 (256)
T 3juy_B 88 ELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQA-PGTLSLSPGER 166 (256)
T ss_dssp EECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEE-CSEEEECTTSC
T ss_pred EECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEec-CCeEEEeCCCC
Confidence 99999999999999999886 222334456777653 233333 34568899999
Q ss_pred EEEEEEEeecCC-CeEEEEeC--CccCC--------------CcccccccCceeEEEEeecCCCCCeEEEEEEEcCCC
Q psy17058 292 LTLECEATGRPM-PTVSWVKY--IAPFD--------------RNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAG 352 (471)
Q Consensus 292 v~l~C~~~g~p~-~~i~W~~~--~~~~~--------------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 352 (471)
++|.|.+.+.+. +.+.|++. +..+. ............+|.|.+++.+|+|.|+|.|.|..+
T Consensus 167 v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 167 ATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp EEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred EEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 999999998776 79999984 22221 011111123456799999999999999999998644
No 287
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.74 E-value=2.2e-17 Score=144.56 Aligned_cols=169 Identities=17% Similarity=0.255 Sum_probs=111.9
Q ss_pred cCCceeecCCCcEEEEee-CCCC--CCeEEEEeCC-CCCC-------------------CCCcc-------cCcEEEEcC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDN-QEQL-------------------PPNMI-------AGETLIING 146 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~-~~~~-------------------~~~~~-------~~~~L~i~~ 146 (471)
+|..+.+.+|++++|.|. .+.+ .+.+.|+|++ +..+ ..+.. ...+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (219)
T 1c1e_H 6 QSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINN 85 (219)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECC
Confidence 456778999999999999 5544 6889999973 2211 11111 135899999
Q ss_pred CCCCCCeEEEEEEEecCCc---eeeeeEEEEEeec--cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCC
Q psy17058 147 ITKADEGVYICSIQNAQGN---VFQDYASIQVDKR--EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPD 220 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~~---~~~~~~~l~v~~~--~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~ 220 (471)
++.+|+|.|+|.+.+..+. .......+.|... .+|.+...++.. .+.+|+.++|.|.+....|.+ .++|++++
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g 164 (219)
T 1c1e_H 86 LKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGS-AAQTNSMVTLGCLVKGYFPEPVTVTWNSGS 164 (219)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCS-SSCCSSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCcc-ccccCCeEEEEEEcccccCCCeEEEEEeCC
Confidence 9999999999999987632 1223455666532 235555443322 456899999999994437888 99999998
Q ss_pred CCCCcCCCc-----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 221 NDGKFGPDV-----EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAY 267 (471)
Q Consensus 221 ~~~~~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 267 (471)
..+...... ......+.|.|.... .|.|.|+|.|.|..+.......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~-~d~g~Y~C~a~n~~~~~~~~~~ 215 (219)
T 1c1e_H 165 LSSGVHTFPAVLQSDLYTLSSSVTVPSSP-RPSETVTCNVAHPASSTKVDKK 215 (219)
T ss_dssp BCTTEEECCCEESSSCEEEEEEEEEESSS-TTTSCCEEEEEEGGGTEEEEEE
T ss_pred cccceEecCCcccCCeEEEEEEEEEeccc-CCCCEEEEEEEeCCCCccEEEe
Confidence 763211110 111123468885444 4669999999998776554443
No 288
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.74 E-value=3.1e-17 Score=147.33 Aligned_cols=167 Identities=16% Similarity=0.309 Sum_probs=113.5
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCC----------------CCCc-------ccCcEEEEcCC
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQL----------------PPNM-------IAGETLIINGI 147 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~----------------~~~~-------~~~~~L~i~~v 147 (471)
..|...|..+.+.+|++++|.|. .+.+.+.+.|+|...... ..+. ....+|+|.++
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 35666778889999999999999 677889999999521110 0011 12447999999
Q ss_pred CCCCCeEEEEEEEecCCc---eeeeeEEEEEee------------------ccCCeeeecCCCceeEEcCCeEEEEEEcc
Q psy17058 148 TKADEGVYICSIQNAQGN---VFQDYASIQVDK------------------REMPRIRIHPNASQTFIVGDRADIQCVLE 206 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~~---~~~~~~~l~v~~------------------~~~p~~~~~~~~~~~v~~g~~~~L~C~~~ 206 (471)
+.+|+|.|+|.+.+..+. .......|.|.. ..+|.+... +....+.+|+.++|.|.+
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-p~~~~v~~G~~v~L~C~~- 161 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQS-PRNKVTVTGENVTLSCRQ- 161 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEES-CSEEEEETTCCEEECEEE-
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEec-CCEEEEeCCCcEEEEEEc-
Confidence 999999999999986542 122334566653 123344333 345567799999999999
Q ss_pred CCCCCCeEEEEeCCCCCCc-----------------CCCceEEe---eeceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 207 AGEPSPTQTWIRPDNDGKF-----------------GPDVEVYQ---ELGVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 207 ~~~p~~~v~W~~~~~~~~~-----------------~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
.+. .+.+.|+|....... ..++.+.. ....|.|.+++.+|+|.|+|.+.|..+.
T Consensus 162 ~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 162 TNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp CSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred CCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence 444 678999985432111 11222211 2347999999999999999999887654
No 289
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.74 E-value=7.9e-18 Score=140.98 Aligned_cols=152 Identities=16% Similarity=0.179 Sum_probs=108.8
Q ss_pred eeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC------------cCCCceEEeeeceEEEeccCCCCCeEEEEEEEcC
Q psy17058 191 QTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK------------FGPDVEVYQELGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~------------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
..+.+|++++|.|.+ .. |.+.+.|+|++..+. ...+..+...++.|.|.+++.+|+|.|.|.+.+.
T Consensus 5 v~~~~G~~VtL~c~~-~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPS-NV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEETTCCEEECCCC-SS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEcCCCEEEcCCC-CC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 457799999999988 43 788999999875321 1223333334578999999999999999999887
Q ss_pred CCceEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCC
Q psy17058 259 AGKEVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRES 338 (471)
Q Consensus 259 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 338 (471)
.+ ...+.|.|..++... .+.... ....|.|.+.+.|.|.+.|++++..+... ....+.+. ..+
T Consensus 83 ~~--~~~~~L~V~~~~~~p-----~i~~~~-~~~~L~C~~~~~p~p~i~W~~~~~~l~~~-------~~~~l~~~--~~~ 145 (171)
T 1ccz_A 83 TD--TMKFFLYVLEMVSKP-----MIYWEC-SNATLTCEVLEGTDVELKLYQGKEHLRSL-------RQKTMSYQ--WTN 145 (171)
T ss_dssp CS--CEEEEEEEECCCCCC-----EEEEET-TTTEEEEECSSCSSCEEEEEETTEEEEEE-------SSSEEEEE--CSC
T ss_pred CC--cEEEEEEEECcCCCC-----EEEEec-CCcEEEEEeCCCCCcEEEEEECCEECcCC-------cceEEEEe--ccC
Confidence 76 667788887653211 111111 11379999998899999999998876421 12233333 377
Q ss_pred CCeEEEEEEEcCCCceEEEEEEE
Q psy17058 339 DAGQYKCIGKNSAGTEEKVITVA 361 (471)
Q Consensus 339 d~G~Y~C~a~n~~g~~~~~~~l~ 361 (471)
|+|.|+|.|.|..|..+..+.|.
T Consensus 146 ~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 146 LRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp CSSCEEEEEEETTEEEEEEECCC
T ss_pred CCceEEEEEEcccCcccceeEEe
Confidence 89999999999999988776654
No 290
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.74 E-value=4.5e-17 Score=144.96 Aligned_cols=161 Identities=16% Similarity=0.227 Sum_probs=108.6
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCC--CC------------cCCCceEEee--eceEEEeccCCCCCeEEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDND--GK------------FGPDVEVYQE--LGVLRFNNIATGDEGKYT 252 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~--~~------------~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~ 252 (471)
....+.+|++++|.|.+ .+.|.+.+.|+|+... .. ...++.+... ...|.|.+++.+|+|.|.
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 87 (242)
T 2znx_A 9 ATLSVTPGNSVSLSCRA-SQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYF 87 (242)
T ss_dssp SEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CeEEEcCCCcEEEEEEe-CCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEE
Confidence 34578899999999999 6777889999996421 10 1233433322 347999999999999999
Q ss_pred EEEEcCCCc-eEEEEEEEEEeCCc------------eeeCCCccEEecCCCcEEEEEEEeecC--CCeEEEEeCC--ccC
Q psy17058 253 CIAENSAGK-EVMNAYIHVLTLPA------------VTITPSEYVSVRPGEPLTLECEATGRP--MPTVSWVKYI--APF 315 (471)
Q Consensus 253 C~~~~~~~~-~~~~~~l~V~~~p~------------~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~i~W~~~~--~~~ 315 (471)
|.+.|..+. ......|.|..+|. +.+.......+.+|++++|.|.+.+.| .+.+.|+++. ..+
T Consensus 88 C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~ 167 (242)
T 2znx_A 88 CQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRL 167 (242)
T ss_dssp EEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCE
T ss_pred EeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCc
Confidence 999987543 22335677765442 112211224689999999999999876 4689999953 222
Q ss_pred C------------------Cccccc--ccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 316 D------------------RNLERD--ELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 316 ~------------------~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
. ...... ......+|.|.+++.+|+|.|+|.|.|.
T Consensus 168 ~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 168 EYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred EEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 1 000000 1123468999999999999999999984
No 291
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.74 E-value=3.1e-17 Score=147.61 Aligned_cols=167 Identities=18% Similarity=0.337 Sum_probs=104.3
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCC--------------------CCc-------ccCcEE
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLP--------------------PNM-------IAGETL 142 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~--------------------~~~-------~~~~~L 142 (471)
+|.|...|..+.+.+|++|+|.|. .+.+.+.+.|+|....... .+. ....+|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 456777788999999999999999 7777889999994111000 000 034579
Q ss_pred EEcCCCCCCCeEEEEEEEecCCc--eeeeeEEEEEeecc---------------CCeeeecCCCceeEEcCCeEEEEEEc
Q psy17058 143 IINGITKADEGVYICSIQNAQGN--VFQDYASIQVDKRE---------------MPRIRIHPNASQTFIVGDRADIQCVL 205 (471)
Q Consensus 143 ~i~~v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~~~---------------~p~~~~~~~~~~~v~~g~~~~L~C~~ 205 (471)
.|.+++.+|+|.|+|.+.+..+. .......|.|.... .+.+. ..+....+.+|++++|.|.+
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~-~~p~~~~v~~G~~v~L~C~~ 160 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVT-QAQSSVSMPVRKAVTLNCLY 160 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEE-CCCCCEEEETTCCEEECCEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeE-EeCCEEEEcCCCCEEEEEEC
Confidence 99999999999999999987552 13344556665321 12333 33445678899999999988
Q ss_pred cCCCCCCeEEEEeCCCCCCc--------------CCCceEEe----eeceEEEeccCCCCCeEEEEEEEcC
Q psy17058 206 EAGEPSPTQTWIRPDNDGKF--------------GPDVEVYQ----ELGVLRFNNIATGDEGKYTCIAENS 258 (471)
Q Consensus 206 ~~~~p~~~v~W~~~~~~~~~--------------~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~~~ 258 (471)
....+.+.+.|+|.+..... ..++.+.. ....|.|.+++.+|+|.|.|.+.+.
T Consensus 161 ~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 161 ETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp ECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred CCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 44347889999986432111 12232221 1245999999999999999999753
No 292
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.74 E-value=4.7e-17 Score=148.33 Aligned_cols=175 Identities=15% Similarity=0.252 Sum_probs=116.0
Q ss_pred EEEcCCceeecCCCcEEEEee-CCCC--CCeEEEEeCCCC-CC-------------------CCCcc-------cCcEEE
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQE-QL-------------------PPNMI-------AGETLI 143 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~~-~~-------------------~~~~~-------~~~~L~ 143 (471)
+...|..+.+.+|++|+|.|. .+.+ .+.+.|+|++.. .. ..+.. ...+|+
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 108 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQ 108 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEE
T ss_pred EEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEE
Confidence 445677889999999999999 5554 578999997321 10 11111 125899
Q ss_pred EcCCCCCCCeEEEEEEEecCC---c-eeeeeEEEEEeecc-------------CCeeeecCCCceeEEcCCeEEEEEEcc
Q psy17058 144 INGITKADEGVYICSIQNAQG---N-VFQDYASIQVDKRE-------------MPRIRIHPNASQTFIVGDRADIQCVLE 206 (471)
Q Consensus 144 i~~v~~~D~G~Y~C~~~~~~~---~-~~~~~~~l~v~~~~-------------~p~~~~~~~~~~~v~~g~~~~L~C~~~ 206 (471)
|.+++.+|+|.|+|.+.+..+ . .......|.|.... ++.+. ..+....+.+|++++|.|.+
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~v~~G~~v~L~C~~- 186 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLT-QSPAIMSASPGEKVTITCSA- 186 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEE-EECSEEEECTTCCEEEEEEE-
T ss_pred ECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEe-cCCCEEEEcCCCcEEEEEEe-
Confidence 999999999999999998765 1 12233456665321 12222 22334568899999999999
Q ss_pred CCCCCCeEEEEe--CCCCCC------------cCCCceEEe--eeceEEEeccCCCCCeEEEEEEEcCCCc-eEEEEEEE
Q psy17058 207 AGEPSPTQTWIR--PDNDGK------------FGPDVEVYQ--ELGVLRFNNIATGDEGKYTCIAENSAGK-EVMNAYIH 269 (471)
Q Consensus 207 ~~~p~~~v~W~~--~~~~~~------------~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~ 269 (471)
.+.+ +.+.|+| ++..+. ...++.... ....|.|.+++.+|+|.|+|.+.+.... ......|.
T Consensus 187 ~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~ 265 (282)
T 1qok_A 187 SSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLE 265 (282)
T ss_dssp SSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEE
T ss_pred cCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEE
Confidence 6667 8999999 454421 123333322 2347999999999999999999875332 22234455
Q ss_pred EE
Q psy17058 270 VL 271 (471)
Q Consensus 270 V~ 271 (471)
|.
T Consensus 266 V~ 267 (282)
T 1qok_A 266 LK 267 (282)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 293
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.73 E-value=1.8e-17 Score=148.57 Aligned_cols=165 Identities=15% Similarity=0.206 Sum_probs=114.0
Q ss_pred CceeEEcCCeEEEEEEccCCCC-----CCeEEEEeCCCCCC--------------cCCCceEEee--eceEEEeccCCCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP-----SPTQTWIRPDNDGK--------------FGPDVEVYQE--LGVLRFNNIATGD 247 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p-----~~~v~W~~~~~~~~--------------~~~~~~~~~~--~~~l~i~~~~~~d 247 (471)
....+.+|++++|.|.+ .+.+ .+.+.|+|++.... ...++.+... ...|.|.+++.+|
T Consensus 42 ~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 120 (252)
T 3bkj_L 42 LSLPVNLGEQASISCRS-SQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAED 120 (252)
T ss_dssp SEEEECTTSCEEEEEEE-SSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred ceEEEeCCCcEEEEEEc-CCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCccc
Confidence 45568899999999999 5665 58999999753211 1233433321 2379999999999
Q ss_pred CeEEEEEEEcCCCce-EEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccCCCc-cc
Q psy17058 248 EGKYTCIAENSAGKE-VMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPFDRN-LE 320 (471)
Q Consensus 248 ~G~Y~C~~~~~~~~~-~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~~~~-~~ 320 (471)
+|.|.|.+.+..+.. .....|.|.. +|.+.+.+... .+.+|+.++|.|.+.| .|.+ ++.|++++..+... ..
T Consensus 121 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 199 (252)
T 3bkj_L 121 LGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN 199 (252)
T ss_dssp CEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCH-HHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEE
T ss_pred CEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCCh-hhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeee
Confidence 999999998875432 2234566653 45555543321 2346899999999998 4544 79999999876533 11
Q ss_pred ---c-----cccCceeEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy17058 321 ---R-----DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEE 355 (471)
Q Consensus 321 ---~-----~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 355 (471)
. ......+.|.|..+..+|+|.|+|.|.|......
T Consensus 200 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~p 242 (252)
T 3bkj_L 200 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 242 (252)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSC
T ss_pred ecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCCC
Confidence 0 0112235699999999999999999999876653
No 294
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.73 E-value=1.2e-16 Score=134.76 Aligned_cols=149 Identities=19% Similarity=0.314 Sum_probs=104.8
Q ss_pred CceeecCCCcEEEEee-C--CCCCCeEEEEe--CCCCCC------------CCCcc--cCcEEEEcCCCCCCCeEEEEEE
Q psy17058 99 RQQSAPEGSQVTIECK-S--NDPSATIKWSK--DNQEQL------------PPNMI--AGETLIINGITKADEGVYICSI 159 (471)
Q Consensus 99 ~~~~v~~G~~v~l~C~-~--~~p~~~v~W~~--~~~~~~------------~~~~~--~~~~L~i~~v~~~D~G~Y~C~~ 159 (471)
..+...+|++|+|.|. . +.+.+.|.|++ + +..+ ..+.. .+++|.|.+++.+|+|.|+|.+
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~-~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~ 85 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSD-KKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSI 85 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGG-CCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCC-CcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEE
Confidence 4567899999999996 2 35667999999 6 4433 11211 5679999999999999999999
Q ss_pred EecCCceee--eeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeec
Q psy17058 160 QNAQGNVFQ--DYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELG 236 (471)
Q Consensus 160 ~~~~~~~~~--~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 236 (471)
.|..+. .. ....|.|... ..|.+. ..+..++|.|.+ .+.|.+.+.|++++..+ . ....
T Consensus 86 ~n~~g~-~~~~~~~~L~V~~~~~~P~i~---------~~~~~v~L~C~~-~~~p~~~~~W~~~g~~l--~------~~~~ 146 (182)
T 1hnf_A 86 YDTKGK-NVLEKIFDLKIQERVSKPKIS---------WTCINTTLTCEV-MNGTDPELNLYQDGKHL--K------LSQR 146 (182)
T ss_dssp EETTSC-EEEEEEEEEEEECCCCCCEEE---------EETTTTEEEEEC-SSCSSCEEEEEESSCEE--E------EESS
T ss_pred EeCCCc-eeEEEEEEEEEcCcCCCCEEE---------EccCcEEEEeEc-cCCCCCEEEEEECCEEC--C------CCCc
Confidence 998776 32 2344555421 122222 134479999999 66778899999998764 1 1123
Q ss_pred eEEEeccCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 237 VLRFNNIATGDEGKYTCIAENSAGKEVMNAYI 268 (471)
Q Consensus 237 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 268 (471)
.|.+.. ...|.|.|+|.|.|..+..+....+
T Consensus 147 ~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 147 VITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 344433 5789999999999999887766554
No 295
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.73 E-value=3.4e-17 Score=143.75 Aligned_cols=168 Identities=14% Similarity=0.200 Sum_probs=114.0
Q ss_pred CCceeecCCCcEEEEee-CCCC--CCeEEEEeCCCCC-C---------------------CCCcc-------cCcEEEEc
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQEQ-L---------------------PPNMI-------AGETLIIN 145 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~~~-~---------------------~~~~~-------~~~~L~i~ 145 (471)
|..+.+.+|++++|.|. .+.+ .+.+.|+|+.... . ..+.. ...+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 55678999999999999 5544 6789999963211 0 11111 13489999
Q ss_pred CCCCCCCeEEEEEEEecCCc----eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEe
Q psy17058 146 GITKADEGVYICSIQNAQGN----VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIR 218 (471)
Q Consensus 146 ~v~~~D~G~Y~C~~~~~~~~----~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~ 218 (471)
+++.+|+|.|.|.+.+..+. .......+.|.. ..+|.+...+... .+.+|+.++|.|.+....|.+ .++|++
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 165 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGS-AAQTNSMVTLGCLVKGYFPEPVTVTWNS 165 (222)
T ss_dssp SCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCS-CCCCSSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred cCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccc-cccCCCcEEEEEEEccEECCCCEEEEec
Confidence 99999999999999986531 122345666653 2345555544322 356899999999995445877 999999
Q ss_pred CCCCCCcCCCce-----EEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 219 PDNDGKFGPDVE-----VYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAY 267 (471)
Q Consensus 219 ~~~~~~~~~~~~-----~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 267 (471)
++..+....... .....+.|.|.++...| |.|+|.|.|..+.......
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~ 218 (222)
T 1q9r_B 166 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKK 218 (222)
T ss_dssp GTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEe
Confidence 987643211000 11223468999999889 9999999998877554443
No 296
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.73 E-value=1.9e-17 Score=147.80 Aligned_cols=166 Identities=16% Similarity=0.165 Sum_probs=114.8
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCC----------------CCCC---cCCCceEEee---eceEEEeccCCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPD----------------NDGK---FGPDVEVYQE---LGVLRFNNIATG 246 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~----------------~~~~---~~~~~~~~~~---~~~l~i~~~~~~ 246 (471)
....+.+|+.++|.|.+ .+.+.+.+.|+|.. .... ...++.+... ...|.|.+++.+
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 87 (246)
T 4dzb_B 9 SWVISKSGTSVKIECRS-LDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPE 87 (246)
T ss_dssp SEEEEETTSCEEEEEEE-SSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGG
T ss_pred cEEEEeCCCcEEEEeEe-cCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHH
Confidence 34578899999999998 66788899999832 1100 1133333321 347999999999
Q ss_pred CCeEEEEEEEcCCC----ceEEEEEEEEEe------CCceeeCCCccEEecCCCcEEEEEEEeecCCC--eEEEEeCCcc
Q psy17058 247 DEGKYTCIAENSAG----KEVMNAYIHVLT------LPAVTITPSEYVSVRPGEPLTLECEATGRPMP--TVSWVKYIAP 314 (471)
Q Consensus 247 d~G~Y~C~~~~~~~----~~~~~~~l~V~~------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~--~i~W~~~~~~ 314 (471)
|+|.|.|.+.+..+ .......|.|.. +|.+.+.......+.+|+.+.|.|.+.|.|++ .+.|+++|..
T Consensus 88 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 167 (246)
T 4dzb_B 88 DSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKE 167 (246)
T ss_dssp GCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred HCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEE
Confidence 99999999987543 222345677763 45555443333345669999999999986654 8999999988
Q ss_pred CCCcccc-------------cccCceeEEEEeecCCCC-CeEEEEEEEcCCCceE
Q psy17058 315 FDRNLER-------------DELTSRAVYTIASVRESD-AGQYKCIGKNSAGTEE 355 (471)
Q Consensus 315 ~~~~~~~-------------~~~~~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~ 355 (471)
+...... ......+.|.|.....+| .|.|+|.|.|......
T Consensus 168 l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 168 VHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp ECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred CCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 7643211 111122458888888888 9999999999876554
No 297
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.73 E-value=5.5e-18 Score=147.01 Aligned_cols=171 Identities=12% Similarity=0.159 Sum_probs=113.4
Q ss_pred CeeeecCCCcee-EEcCCeEEEEEEccCCC---C-CCeEEEEeCCCCCCcCC-------CceEEeeeceEEEeccCCCCC
Q psy17058 181 PRIRIHPNASQT-FIVGDRADIQCVLEAGE---P-SPTQTWIRPDNDGKFGP-------DVEVYQELGVLRFNNIATGDE 248 (471)
Q Consensus 181 p~~~~~~~~~~~-v~~g~~~~L~C~~~~~~---p-~~~v~W~~~~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d~ 248 (471)
|.+.+.++.... +.+|++++|.|.+. +. | ...++|+|++..+.... ........+.|.|.+++.+|+
T Consensus 2 p~v~~~~P~~~~~v~~G~~v~L~C~~~-g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 80 (207)
T 2vol_A 2 SSVFIFPPKPKDVLTITLTPKVTCVVV-DISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNG 80 (207)
T ss_dssp CEEEEECCCHHHHHSTTSCCEEEEEEE-EECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTT
T ss_pred CcEEEeCcChhhhhccCCceEEEEEEe-CcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCC
Confidence 344444444333 77999999999994 54 3 35999999986532210 000111235799999999999
Q ss_pred eEEEEEEEcCCCce--EEEEEE--EEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCC-CeEEEEeCCccCCCccccc
Q psy17058 249 GKYTCIAENSAGKE--VMNAYI--HVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPM-PTVSWVKYIAPFDRNLERD 322 (471)
Q Consensus 249 G~Y~C~~~~~~~~~--~~~~~l--~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~-~~i~W~~~~~~~~~~~~~~ 322 (471)
|.|+|.+.|..+.. ...+.+ .+..+|.+.+.+.... ...|+.+.|.|.+.| .|+ +.+.|+++|..+.......
T Consensus 81 G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 159 (207)
T 2vol_A 81 KEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKE-QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQ 159 (207)
T ss_dssp CCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTG-GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECC
T ss_pred CEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHH-HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCC
Confidence 99999999987753 233333 4456777766543322 235999999999998 455 3899999998875321100
Q ss_pred ---c----cCceeEEEEeecCCCCCeEEEEEEEcCCCc
Q psy17058 323 ---E----LTSRAVYTIASVRESDAGQYKCIGKNSAGT 353 (471)
Q Consensus 323 ---~----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 353 (471)
. ....+.|.|.....+|.|.|+|.|.|....
T Consensus 160 ~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 160 PIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred ceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 1 112234667666677899999999998654
No 298
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.73 E-value=6.8e-17 Score=145.09 Aligned_cols=175 Identities=18% Similarity=0.200 Sum_probs=118.2
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC---------------cCCCceEE----eeeceEEEeccCCCCC
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK---------------FGPDVEVY----QELGVLRFNNIATGDE 248 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~---------------~~~~~~~~----~~~~~l~i~~~~~~d~ 248 (471)
+....+.+|++++|.|.+ .+.|.+.+.|+|...... ...++.+. .....|.|.+++.+|+
T Consensus 10 p~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Ds 88 (256)
T 3tf7_C 10 DARVTVSEGASLQLRCKY-SYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDS 88 (256)
T ss_dssp CSEEEEETTSCEEECCEE-ECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGC
T ss_pred CceEEecCCCeEEEEEEe-CCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccC
Confidence 345678899999999999 666889999998432211 11233332 1134699999999999
Q ss_pred eEEEEEEEcCCCc----eEEEEEEEEEe--------------------CCceeeCCCccEEecCCCcEEEEEEEeecCCC
Q psy17058 249 GKYTCIAENSAGK----EVMNAYIHVLT--------------------LPAVTITPSEYVSVRPGEPLTLECEATGRPMP 304 (471)
Q Consensus 249 G~Y~C~~~~~~~~----~~~~~~l~V~~--------------------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~ 304 (471)
|.|.|.+.+..+. ....+.|.|.. +|.+...+ ....+.+|++++|.|.+.+. .+
T Consensus 89 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~-~~ 166 (256)
T 3tf7_C 89 AVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSP-RNKVTVTGENVTLSCRQTNS-HN 166 (256)
T ss_dssp SEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESC-SEEEEETTCCEEECEEECSC-CS
T ss_pred EEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecC-CEEEEeCCCcEEEEEEcCCC-ce
Confidence 9999999987542 12234566664 34444444 34577899999999999876 67
Q ss_pred eEEEEeCCccCCC-------------------ccc-ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceE--EEEEEEE
Q psy17058 305 TVSWVKYIAPFDR-------------------NLE-RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEE--KVITVAV 362 (471)
Q Consensus 305 ~i~W~~~~~~~~~-------------------~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~V 362 (471)
.+.|++....... ... ........+|.|.+++.+|+|.|+|.|.|..|... .-..|.|
T Consensus 167 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v 246 (256)
T 3tf7_C 167 YMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGSKLTV 246 (256)
T ss_dssp EEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCeEEEE
Confidence 9999984322110 000 00123456899999999999999999999876441 2245666
Q ss_pred ecC
Q psy17058 363 EHR 365 (471)
Q Consensus 363 ~~~ 365 (471)
.+.
T Consensus 247 ~~~ 249 (256)
T 3tf7_C 247 LEL 249 (256)
T ss_dssp ECG
T ss_pred Ecc
Confidence 654
No 299
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.73 E-value=1.6e-16 Score=139.53 Aligned_cols=167 Identities=15% Similarity=0.221 Sum_probs=114.8
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCC--CC-----------------cCCCceEEee----eceEEEeccC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDND--GK-----------------FGPDVEVYQE----LGVLRFNNIA 244 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~--~~-----------------~~~~~~~~~~----~~~l~i~~~~ 244 (471)
...+.+|+.++|.|.+ .+.+ ...+.|+|.... .. ...++.+..+ ...|.|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 9 GGVVQPGKSLRLSCAA-SGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CEEEcCCCcEEEEEEe-cCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 4578899999999998 4444 468999986421 10 1234444432 2479999999
Q ss_pred CCCCeEEEEEEEcCCC----c--eEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEe-C
Q psy17058 245 TGDEGKYTCIAENSAG----K--EVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVK-Y 311 (471)
Q Consensus 245 ~~d~G~Y~C~~~~~~~----~--~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~-~ 311 (471)
.+|+|.|.|.+.+..+ . ....+.|.|.. +|.+...+.. ..+.+|+.++|.|.+.|. |.+ .+.|++ +
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSC-ENSNPSSTVAVGCLAQDFLPDSITFSWKYKN 166 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECT-TCCCSSSEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCC-cccCCCCcEEEEEEEEEEeCCCeEEEeEccC
Confidence 9999999999998652 1 11234677763 3444432211 135689999999999986 777 999999 8
Q ss_pred CccCCCcc------cccccCceeEEEEeecCC--CCCeEEEEEEEcCCCceEEEE
Q psy17058 312 IAPFDRNL------ERDELTSRAVYTIASVRE--SDAGQYKCIGKNSAGTEEKVI 358 (471)
Q Consensus 312 ~~~~~~~~------~~~~~~~~~~l~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~ 358 (471)
+..+.... ........+.|.|..... +|.|.|+|.|.|..+.....+
T Consensus 167 g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 167 NSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp SCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 88775410 001122345688887776 889999999999999876654
No 300
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.73 E-value=6e-17 Score=144.92 Aligned_cols=161 Identities=20% Similarity=0.294 Sum_probs=109.1
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCC--------------CcCCCceEEee--eceEEEeccCCCCCeEE
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDG--------------KFGPDVEVYQE--LGVLRFNNIATGDEGKY 251 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~--------------~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y 251 (471)
+....+.+|+.++|.|.+ .+.|.+.+.|+|..... ....++..... ...|.|.+++.+|+|.|
T Consensus 11 p~~~~v~~G~~v~L~C~~-~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 89 (250)
T 3esu_F 11 TSSLSASLGDRVTISCRA-SQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTY 89 (250)
T ss_dssp CSEEEECTTCCEEEEEEE-SSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCEEEeeCCCcEEEEEEe-cccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEE
Confidence 345567899999999999 77788899999964221 11233333221 23799999999999999
Q ss_pred EEEEEcCCCce-EEEEEEEEEeC------------------CceeeCCCccEEecCCCcEEEEEEEeecC--CCeEEEEe
Q psy17058 252 TCIAENSAGKE-VMNAYIHVLTL------------------PAVTITPSEYVSVRPGEPLTLECEATGRP--MPTVSWVK 310 (471)
Q Consensus 252 ~C~~~~~~~~~-~~~~~l~V~~~------------------p~~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~i~W~~ 310 (471)
.|.+.|..+.. .....|.|..+ +...+.......+.+|++++|.|.+.+.| .+.+.|++
T Consensus 90 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k 169 (250)
T 3esu_F 90 FCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVK 169 (250)
T ss_dssp EEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEE
T ss_pred EEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEE
Confidence 99998865432 23345666542 11222222346789999999999998876 67999999
Q ss_pred C--CccCCCc-------------------ccc--cccCceeEEEEeecCCCCCeEEEEEEEc
Q psy17058 311 Y--IAPFDRN-------------------LER--DELTSRAVYTIASVRESDAGQYKCIGKN 349 (471)
Q Consensus 311 ~--~~~~~~~-------------------~~~--~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 349 (471)
+ +..+... ... .......+|.|.+++.+|+|.|+|.|.|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 170 QRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp ECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred ECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 7 4333110 000 0113445799999999999999999997
No 301
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.73 E-value=9.5e-18 Score=148.53 Aligned_cols=173 Identities=19% Similarity=0.352 Sum_probs=113.7
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCCC-CC-eEEEEeCCC-CCC--------------CCCcc-----cCcEEEEcCC
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SNDP-SA-TIKWSKDNQ-EQL--------------PPNMI-----AGETLIINGI 147 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~p-~~-~v~W~~~~~-~~~--------------~~~~~-----~~~~L~i~~v 147 (471)
.+.+.. |..+.+.+|++++|.|. .+.+ .+ .+.|+|++. ... ..+.. ....|+|.++
T Consensus 20 ~~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 98 (234)
T 2j6e_L 20 QSVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGL 98 (234)
T ss_dssp CCCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESC
T ss_pred ccEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCC
Confidence 344444 77889999999999999 5433 33 799999732 111 11111 2348999999
Q ss_pred CCCCCeEEEEEEEecCCc--eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCC
Q psy17058 148 TKADEGVYICSIQNAQGN--VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDND 222 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~ 222 (471)
+.+|+|.|+|.+.+..+. .......+.|.. ..+|.+.+.+... .+.+|+.++|.|.+....|. +.++|++++..
T Consensus 99 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 177 (234)
T 2j6e_L 99 RSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSS-EELQANKATLVCLISDFFPGAVTVAWKADGAP 177 (234)
T ss_dssp CSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCH-HHHTTSCCCEEECCCBCSSCCCEEEEEETTEE
T ss_pred CHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCCh-hHhcCCceEEEEEEEEEcCCceEEEEEECCEE
Confidence 999999999999988762 122233444432 1345554443322 23368899999999544555 59999999876
Q ss_pred CCcCCC---ce-----EEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEE
Q psy17058 223 GKFGPD---VE-----VYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMN 265 (471)
Q Consensus 223 ~~~~~~---~~-----~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 265 (471)
+..... .. .....+.|.|..+..+|.|.|+|.|.|.......+
T Consensus 178 l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 228 (234)
T 2j6e_L 178 VKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 228 (234)
T ss_dssp CCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEE
T ss_pred CCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEe
Confidence 433210 00 01113468899999999999999999987654433
No 302
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.73 E-value=7.9e-17 Score=144.68 Aligned_cols=162 Identities=20% Similarity=0.378 Sum_probs=106.4
Q ss_pred cCCceeecCCCcEEEEee-CCC--CCCeEEEEeCCCCCC---------------CCCcc-----cCcEEEEcCCCCCCCe
Q psy17058 97 TPRQQSAPEGSQVTIECK-SND--PSATIKWSKDNQEQL---------------PPNMI-----AGETLIINGITKADEG 153 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~--p~~~v~W~~~~~~~~---------------~~~~~-----~~~~L~i~~v~~~D~G 153 (471)
.|..+.+.+|++++|.|. .+. +.+.+.|+|+..... ..+.. ...+|.|.+++.+|+|
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 87 (256)
T 3ux9_B 8 QPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEA 87 (256)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred cCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCE
Confidence 345678999999999999 554 778999999621111 11111 2337999999999999
Q ss_pred EEEEEEEecCCc--eeeeeEEEEEeeccCC-----------------eeeecCCCceeEEcCCeEEEEEEccCCCC--CC
Q psy17058 154 VYICSIQNAQGN--VFQDYASIQVDKREMP-----------------RIRIHPNASQTFIVGDRADIQCVLEAGEP--SP 212 (471)
Q Consensus 154 ~Y~C~~~~~~~~--~~~~~~~l~v~~~~~p-----------------~~~~~~~~~~~v~~g~~~~L~C~~~~~~p--~~ 212 (471)
.|+|.+.+..+. .......|.|...... .+.+.......+.+|++++|.|.+ .+.+ .+
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~~ 166 (256)
T 3ux9_B 88 DYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAA-SGFTFSSY 166 (256)
T ss_dssp EEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEE-ESSCGGGS
T ss_pred EEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEE-eCCccccc
Confidence 999999986543 1223345555432110 111222233457899999999999 5544 67
Q ss_pred eEEEEeCCCCCCc-------------------CCCceEEee----eceEEEeccCCCCCeEEEEEEEcCC
Q psy17058 213 TQTWIRPDNDGKF-------------------GPDVEVYQE----LGVLRFNNIATGDEGKYTCIAENSA 259 (471)
Q Consensus 213 ~v~W~~~~~~~~~-------------------~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~ 259 (471)
.+.|+|++..... ..++.+... ...|.|.+++.+|+|.|+|.+.|..
T Consensus 167 ~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 167 AMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 9999997422111 123333321 2359999999999999999999864
No 303
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.73 E-value=5.1e-17 Score=142.86 Aligned_cols=164 Identities=17% Similarity=0.206 Sum_probs=113.1
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCC--CCC-----------------cCCCceEEee----eceEEEeccC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDN--DGK-----------------FGPDVEVYQE----LGVLRFNNIA 244 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~--~~~-----------------~~~~~~~~~~----~~~l~i~~~~ 244 (471)
...+.+|++++|.|.+ .+.+ ...+.|+|... ... ...++.+..+ ...|.|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (225)
T 1op3_H 9 GGLVKAGGSLILSCGV-SNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR 87 (225)
T ss_dssp CEEEETTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CeEecCCCCEEEEEEe-cCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC
Confidence 4568899999999999 5555 57899998642 110 1234444432 3579999999
Q ss_pred CCCCeEEEEEEEcCCC-----c---eEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEe
Q psy17058 245 TGDEGKYTCIAENSAG-----K---EVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVK 310 (471)
Q Consensus 245 ~~d~G~Y~C~~~~~~~-----~---~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~ 310 (471)
.+|+|.|.|.+.+..+ . ....+.|.|.. +|.+....... .+.+|+.+.|.|.+.|. |.+ .+.|++
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 166 (225)
T 1op3_H 88 VEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSWNS 166 (225)
T ss_dssp GGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEEBSSCCEEECCT
T ss_pred hhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeEECCCeEEEEec
Confidence 9999999999998754 2 11345777775 34444322211 25689999999999986 776 999999
Q ss_pred CCccCCCccc------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy17058 311 YIAPFDRNLE------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEK 356 (471)
Q Consensus 311 ~~~~~~~~~~------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 356 (471)
++..+..... .......+.|.|..+..+| |.|+|.|.|..+....
T Consensus 167 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 217 (225)
T 1op3_H 167 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 217 (225)
T ss_dssp TSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEEE
T ss_pred CCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCccE
Confidence 9876431100 0111234578999998888 9999999997765543
No 304
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.73 E-value=1.6e-16 Score=135.54 Aligned_cols=164 Identities=14% Similarity=0.210 Sum_probs=110.1
Q ss_pred cEEEcCCc--eeecCCCcEEEEeeCCCCCC--eEEEEeCCCCCCCCCc-c-cCcEEEEcCCCCCCCeEEEEEEEecCCce
Q psy17058 93 EVQVTPRQ--QSAPEGSQVTIECKSNDPSA--TIKWSKDNQEQLPPNM-I-AGETLIINGITKADEGVYICSIQNAQGNV 166 (471)
Q Consensus 93 ~v~~~p~~--~~v~~G~~v~l~C~~~~p~~--~v~W~~~~~~~~~~~~-~-~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 166 (471)
.+.+.|.. +.+.+|++++|.|..+.|.+ .|.|++. ...+.... . ....|.|.+++.+|+|.|.|.+.+..+.
T Consensus 7 ~~~V~pp~~~v~v~~G~sv~L~C~a~~p~P~~~i~W~~~-~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~- 84 (210)
T 1gsm_A 7 PLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGL-DTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT- 84 (210)
T ss_dssp SEEEESCCSEEEEETTCCEEEEEEECCSSTTCEEEEESS-TTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEE-
T ss_pred CEEEeCCCCceEEeCCCCEEEEEECCCCCCCcceEEeec-ccccCcEEecCCccEEEECccCcccCceEEEEEEeCCCc-
Confidence 34444544 58999999999999666666 9999997 43342211 1 4578999999999999999999997655
Q ss_pred eeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC----CeEEEEeCCCCCCcCCCce------------
Q psy17058 167 FQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS----PTQTWIRPDNDGKFGPDVE------------ 230 (471)
Q Consensus 167 ~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~----~~v~W~~~~~~~~~~~~~~------------ 230 (471)
....+.|.|. .+|......+. ...+|+.+ |.|.+.+..|. ++++|+|++..+.......
T Consensus 85 ~~~~~~ltV~--~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~ 159 (210)
T 1gsm_A 85 FQHTVQLLVY--AFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQG 159 (210)
T ss_dssp EEEEEEEEEE--BCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSS
T ss_pred eEEEEEEEEE--ecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccC
Confidence 4444555554 55643332222 45678888 99999554564 5899999998764321101
Q ss_pred ----EEeeeceEEEeccCCCCCeEEEEEEEcCCCceE
Q psy17058 231 ----VYQELGVLRFNNIATGDEGKYTCIAENSAGKEV 263 (471)
Q Consensus 231 ----~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 263 (471)
.+.-.+++.+.....++.+.|+|+|.+......
T Consensus 160 ~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~ 196 (210)
T 1gsm_A 160 DEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLE 196 (210)
T ss_dssp CCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTEE
T ss_pred CcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCCc
Confidence 111123455556666777899999998764433
No 305
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.72 E-value=3.1e-17 Score=146.41 Aligned_cols=170 Identities=16% Similarity=0.269 Sum_probs=114.7
Q ss_pred CcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCC---------------CCCCC-----CCcc------cCcEEEE
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDN---------------QEQLP-----PNMI------AGETLII 144 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~---------------~~~~~-----~~~~------~~~~L~i 144 (471)
+.+...|..+.+.+|++++|.|. .+.+.+.+.|+|.. +.... .+.. ...+|.|
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I 81 (246)
T 4dzb_B 2 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 81 (246)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEE
T ss_pred CccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEE
Confidence 35667788899999999999998 77788999999931 11111 1111 2347999
Q ss_pred cCCCCCCCeEEEEEEEecCC---ceeeeeEEEEEee----ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEE
Q psy17058 145 NGITKADEGVYICSIQNAQG---NVFQDYASIQVDK----REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTW 216 (471)
Q Consensus 145 ~~v~~~D~G~Y~C~~~~~~~---~~~~~~~~l~v~~----~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W 216 (471)
.+++.+|+|.|+|.+.+..+ ........+.|.. ..+|.+.+..+....+.+|+.++|.|.+....|.+ .++|
T Consensus 82 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 161 (246)
T 4dzb_B 82 TSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 161 (246)
T ss_dssp CSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEE
Confidence 99999999999999986532 1123344566552 23566655544444566799999999994334433 8999
Q ss_pred EeCCCCCCcCCCc-------------eEEeeeceEEEeccCCCC-CeEEEEEEEcCCCc
Q psy17058 217 IRPDNDGKFGPDV-------------EVYQELGVLRFNNIATGD-EGKYTCIAENSAGK 261 (471)
Q Consensus 217 ~~~~~~~~~~~~~-------------~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~ 261 (471)
++++..+...... ..+...+.|.|.....+| .|.|+|.+.|....
T Consensus 162 ~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 162 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp EETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 9988764332110 111113458888888888 99999999987544
No 306
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.72 E-value=7.5e-17 Score=141.24 Aligned_cols=163 Identities=14% Similarity=0.217 Sum_probs=113.8
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCCCC-------------------cCCCceEEee----eceEEEeccC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDNDGK-------------------FGPDVEVYQE----LGVLRFNNIA 244 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~~~-------------------~~~~~~~~~~----~~~l~i~~~~ 244 (471)
...+.+|++++|.|.+ .+.+ ...+.|+|...... ...++.+..+ ...|.|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 9 GGLVQPGGSLKLSCAA-SGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CeEecCCCcEEEEEEe-cCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 4578899999999998 4444 57899998642100 1234444431 3479999999
Q ss_pred CCCCeEEEEEEEcCCCc---eEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CC--CeEEEEeCCcc
Q psy17058 245 TGDEGKYTCIAENSAGK---EVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PM--PTVSWVKYIAP 314 (471)
Q Consensus 245 ~~d~G~Y~C~~~~~~~~---~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~--~~i~W~~~~~~ 314 (471)
.+|+|.|.|.+.+..+. ....+.|.|.. +|.+...+ ...+.+|+.++|.|.+.+. |. +.+.|++++..
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~--~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~ 165 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT--LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKD 165 (220)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC--CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSS
T ss_pred hhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee--cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEe
Confidence 99999999999987542 12235677764 34444433 2235789999999999986 76 69999999877
Q ss_pred CCCc--cc----ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy17058 315 FDRN--LE----RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEE 355 (471)
Q Consensus 315 ~~~~--~~----~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 355 (471)
+... .. .......+.|.|.....+|.|.|+|.|.|..|...
T Consensus 166 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 166 ITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred cceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 5211 00 01112234689999999999999999999998765
No 307
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.72 E-value=1.1e-16 Score=142.82 Aligned_cols=161 Identities=18% Similarity=0.257 Sum_probs=108.4
Q ss_pred CceeEEcCCeEEEEEEccCCCC-----CCeEEEEeCCCCCC--------------cCCCceEEee--eceEEEeccCCCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP-----SPTQTWIRPDNDGK--------------FGPDVEVYQE--LGVLRFNNIATGD 247 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p-----~~~v~W~~~~~~~~--------------~~~~~~~~~~--~~~l~i~~~~~~d 247 (471)
....+.+|+.++|.|.+ .+.+ .+.+.|+|++.... ...++.+... ...|.|.+++.+|
T Consensus 9 ~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 87 (247)
T 1svz_A 9 LYLPVSLGDQASISCRS-SQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAED 87 (247)
T ss_dssp SEEEECTTCCEEEEEEE-SSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CeEEecCCCCEEEEEeC-CCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHH
Confidence 45578899999999999 5666 68999999642110 1233433321 2379999999999
Q ss_pred CeEEEEEEEcCCCc-eEEEEEEEEEeCC------------ceeeCCCccEEecCCCcEEEEEEEeecC--CCeEEEEeCC
Q psy17058 248 EGKYTCIAENSAGK-EVMNAYIHVLTLP------------AVTITPSEYVSVRPGEPLTLECEATGRP--MPTVSWVKYI 312 (471)
Q Consensus 248 ~G~Y~C~~~~~~~~-~~~~~~l~V~~~p------------~~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~i~W~~~~ 312 (471)
+|.|.|.+.|..+. ....+.|.|..++ .+.+.......+.+|++++|.|.+.+.+ .+.+.|++++
T Consensus 88 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~ 167 (247)
T 1svz_A 88 LGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQA 167 (247)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEeC
Confidence 99999999887543 2233566666542 2222222234689999999999999875 4689999964
Q ss_pred c--cCC-------------------Cccccc--ccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 313 A--PFD-------------------RNLERD--ELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 313 ~--~~~-------------------~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
. .+. ...... ......+|.|.+++.+|+|.|+|.|.|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 168 PGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp TTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 2 110 000000 1223468999999999999999999995
No 308
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.72 E-value=3.1e-18 Score=149.83 Aligned_cols=174 Identities=11% Similarity=0.202 Sum_probs=114.2
Q ss_pred cCCeeeecCCCcee-EEcCCeEEEEEEccCCC---CC-CeEEEEeCCCCCCcCCCc-------eEEeeeceEEEeccCCC
Q psy17058 179 EMPRIRIHPNASQT-FIVGDRADIQCVLEAGE---PS-PTQTWIRPDNDGKFGPDV-------EVYQELGVLRFNNIATG 246 (471)
Q Consensus 179 ~~p~~~~~~~~~~~-v~~g~~~~L~C~~~~~~---p~-~~v~W~~~~~~~~~~~~~-------~~~~~~~~l~i~~~~~~ 246 (471)
.+|.+.+.++.... +.+|+.++|.|.+. +. |. +.++|+|++..+...... ......+.|.|.+++.+
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~-g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVV-DVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM 86 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEE-EECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEc-CCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcC
Confidence 34556555544332 67899999999994 44 43 799999998653321100 01112457999999999
Q ss_pred CCeEEEEEEEcCCCce--EEEEEE--EEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccCCCccc
Q psy17058 247 DEGKYTCIAENSAGKE--VMNAYI--HVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPFDRNLE 320 (471)
Q Consensus 247 d~G~Y~C~~~~~~~~~--~~~~~l--~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~~~~~~ 320 (471)
|+|.|+|.+.|..+.. ...+.+ .+..+|.+.+.+.... ..+|+.+.|.|.+.| +|.+ .+.|+++|..+.....
T Consensus 87 D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~ 165 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAE-QLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKD 165 (218)
T ss_dssp TTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGG-GTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEE
T ss_pred CCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChH-HhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCcee
Confidence 9999999999986643 333322 4456677665543322 235999999999998 6765 9999999987643211
Q ss_pred cc---c----cCceeEEEEeecCCCCCeEEEEEEEcCCCce
Q psy17058 321 RD---E----LTSRAVYTIASVRESDAGQYKCIGKNSAGTE 354 (471)
Q Consensus 321 ~~---~----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 354 (471)
.. . ....+.|.|.....+|.|.|+|.|.|.....
T Consensus 166 ~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~~ 206 (218)
T 2rgs_A 166 TAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLKN 206 (218)
T ss_dssp CCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSGG
T ss_pred cccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCCC
Confidence 00 0 1122345565555667999999999987653
No 309
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.72 E-value=1.2e-16 Score=139.91 Aligned_cols=164 Identities=15% Similarity=0.226 Sum_probs=111.6
Q ss_pred CCceeecCCCcEEEEee-CCCC--CCeEEEEeCCCCC--------------------CCCCcc-------cCcEEEEcCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQEQ--------------------LPPNMI-------AGETLIINGI 147 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~~~--------------------~~~~~~-------~~~~L~i~~v 147 (471)
|..+.+.+|++++|.|. .+.+ .+.+.|+|..... ...+.. ....|+|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 45688999999999999 5544 5789999863111 111111 1248999999
Q ss_pred CCCCCeEEEEEEEecCCc--eeeeeEEEEEeec--cCCeeeecCCCceeEEcCCeEEEEEEccCCCCC--CeEEEEeCCC
Q psy17058 148 TKADEGVYICSIQNAQGN--VFQDYASIQVDKR--EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS--PTQTWIRPDN 221 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~~--~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~--~~v~W~~~~~ 221 (471)
+.+|+|.|.|.+.+..+. .......|.|... .+|.+...+ ...+.+|+.++|.|.+....|. +.+.|++++.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~--~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~ 164 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT--LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGK 164 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC--CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCS
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee--cccccCCCcEEEEEEEEeEECCCcEEEEEecCCE
Confidence 999999999999986542 1223456666532 345555544 2235689999999999544476 7999999987
Q ss_pred CCCcC-CCc-----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceE
Q psy17058 222 DGKFG-PDV-----EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEV 263 (471)
Q Consensus 222 ~~~~~-~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 263 (471)
.+... ... ..+...+.|.|......|.|.|+|.+.|..+...
T Consensus 165 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 165 DITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp SCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred ecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 64211 000 0111134588988888999999999999877644
No 310
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.72 E-value=4.4e-17 Score=143.60 Aligned_cols=168 Identities=17% Similarity=0.257 Sum_probs=113.1
Q ss_pred ceeEEcCCeEEEEEEccCCCCC----CeEEEEeCC--CCCC----------------cCCCceEEee----eceEEEecc
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPS----PTQTWIRPD--NDGK----------------FGPDVEVYQE----LGVLRFNNI 243 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~----~~v~W~~~~--~~~~----------------~~~~~~~~~~----~~~l~i~~~ 243 (471)
...+.+|+.++|.|.+ .+.+. +.+.|+|.. .... ...++.+..+ ...|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (228)
T 3bae_H 9 PGLLKPSQTLSLTCSF-SGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSV 87 (228)
T ss_dssp CSEECTTCCEEEEEEE-ESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSC
T ss_pred ceeecCCCeEEEEEEE-eCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCC
Confidence 4468899999999999 55553 789999864 2210 1223333321 357999999
Q ss_pred CCCCCeEEEEEEEcCCC------c---eEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEE
Q psy17058 244 ATGDEGKYTCIAENSAG------K---EVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSW 308 (471)
Q Consensus 244 ~~~d~G~Y~C~~~~~~~------~---~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W 308 (471)
+.+|+|.|.|.+.+..+ . ....+.|.|.. +|.+...+.. ..+.+|+.+.|.|.+.|. |.+ .+.|
T Consensus 88 ~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~~~l~C~~~g~~P~p~~v~W 166 (228)
T 3bae_H 88 DTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPVTLTW 166 (228)
T ss_dssp CGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC------CCSEEEEEEEEEEEBSSCCEEEE
T ss_pred CcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEeccc-ccccCCCCEEEEEEEccEeCCCEEEEE
Confidence 99999999999998654 1 11235677763 4555443322 245789999999999985 877 9999
Q ss_pred EeCCccCCCccc--c---cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 309 VKYIAPFDRNLE--R---DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITV 360 (471)
Q Consensus 309 ~~~~~~~~~~~~--~---~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 360 (471)
++++..+..... . ......+.|.|..+..+| |.|+|.|.|..|.......+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~~ 222 (228)
T 3bae_H 167 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKKI 222 (228)
T ss_dssp GGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred eeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEEc
Confidence 998876421100 0 111234678898888866 99999999999887655443
No 311
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.71 E-value=3.7e-17 Score=145.37 Aligned_cols=169 Identities=14% Similarity=0.274 Sum_probs=113.8
Q ss_pred CcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCCCC------------------CCCCcc------cCcEEEEcCC
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQEQ------------------LPPNMI------AGETLIINGI 147 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~------------------~~~~~~------~~~~L~i~~v 147 (471)
+.+...|..+.+.+|++++|.|....+.+.+.|+|..... ...+.. ...+|.|.++
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 3 SGVVQSPRHIIKEKGGRSVLTCIPISGHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CCCEEECSEEEEETTCCEEEEEECCTTCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred cccccCcceeeecCCCcEEEEEEeCCCCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 4566678888999999999999943477899999931111 011111 3458999999
Q ss_pred CCCCCeEEEEEEEe--cCCceeeeeEEEEEee----ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCC
Q psy17058 148 TKADEGVYICSIQN--AQGNVFQDYASIQVDK----REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPD 220 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~--~~~~~~~~~~~l~v~~----~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~ 220 (471)
+.+|+|.|+|.+.+ ...........+.|.. ..+|.+.+..+....+.+|+.++|.|.+....|.+ .+.|++++
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g 162 (240)
T 3q5y_A 83 ELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNG 162 (240)
T ss_dssp CGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECC
Confidence 99999999999973 2222233345566652 24566665544444556799999999995446655 89999998
Q ss_pred CCCCcCCCc----e-----EEeeeceEEEeccCCCC-CeEEEEEEEcCCC
Q psy17058 221 NDGKFGPDV----E-----VYQELGVLRFNNIATGD-EGKYTCIAENSAG 260 (471)
Q Consensus 221 ~~~~~~~~~----~-----~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~ 260 (471)
..+...... . .+...+.|.|.....+| .|.|+|.+.|...
T Consensus 163 ~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 163 KEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGL 212 (240)
T ss_dssp EEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred EECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 764332111 0 11112348888888888 7799999998653
No 312
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.71 E-value=1.8e-16 Score=143.42 Aligned_cols=168 Identities=20% Similarity=0.366 Sum_probs=111.6
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCC-----CCeEEEEeCCC-CCC--------------CCCcc-----cCcEEE
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDP-----SATIKWSKDNQ-EQL--------------PPNMI-----AGETLI 143 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p-----~~~v~W~~~~~-~~~--------------~~~~~-----~~~~L~ 143 (471)
..+.+...|..+.+.+|++++|.|. .+.+ .+.+.|++++. ... ..+.. ...+|+
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 93 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLK 93 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEE
Confidence 4567777888899999999999999 6555 57899998632 111 11211 234899
Q ss_pred EcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeecc-------CCe-------------eeecCCCceeEEcCCeEEEEE
Q psy17058 144 INGITKADEGVYICSIQNAQGNVFQDYASIQVDKRE-------MPR-------------IRIHPNASQTFIVGDRADIQC 203 (471)
Q Consensus 144 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~-------~p~-------------~~~~~~~~~~v~~g~~~~L~C 203 (471)
|.+++.+|+|.|+|.+.+..+........|.|.... +|. +.+..+....+.+|++++|.|
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C 173 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSC 173 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEE
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEE
Confidence 999999999999999988654322233455554321 110 122222345788999999999
Q ss_pred EccCCCC--CCeEEEEeCCCC--C-------------------CcCCCceEEee----eceEEEeccCCCCCeEEEEEEE
Q psy17058 204 VLEAGEP--SPTQTWIRPDND--G-------------------KFGPDVEVYQE----LGVLRFNNIATGDEGKYTCIAE 256 (471)
Q Consensus 204 ~~~~~~p--~~~v~W~~~~~~--~-------------------~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~ 256 (471)
.+ .+.+ .+.+.|+|+... . ....++.+..+ ...|.|.+++.+|+|.|+|.+.
T Consensus 174 ~~-~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 252 (268)
T 1x9q_A 174 VT-SGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGA 252 (268)
T ss_dssp EE-ESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred Ee-cCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEc
Confidence 99 4444 378999986321 1 11234444332 2479999999999999999998
Q ss_pred cC
Q psy17058 257 NS 258 (471)
Q Consensus 257 ~~ 258 (471)
+.
T Consensus 253 ~~ 254 (268)
T 1x9q_A 253 SY 254 (268)
T ss_dssp ET
T ss_pred cC
Confidence 64
No 313
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.71 E-value=3.1e-17 Score=146.31 Aligned_cols=169 Identities=15% Similarity=0.271 Sum_probs=113.6
Q ss_pred cEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCC-----------------CCCCcc------cCcEEEEcCCC
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQ-----------------LPPNMI------AGETLIINGIT 148 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~-----------------~~~~~~------~~~~L~i~~v~ 148 (471)
.+...|..+.+.+|++++|.|. .+.+.+.+.|+|..... ...+.. ...+|.|.+++
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 82 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLL 82 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCC
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCC
Confidence 4566778899999999999999 77788999999931110 011111 23479999999
Q ss_pred CCCCeEEEEEEEecC-----CceeeeeEEEEEee----ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEe
Q psy17058 149 KADEGVYICSIQNAQ-----GNVFQDYASIQVDK----REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIR 218 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~-----~~~~~~~~~l~v~~----~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~ 218 (471)
.+|+|.|+|.+.+.. .........+.|.. ..+|.+.+..+....+.+|+.++|.|.+....|.+ .++|++
T Consensus 83 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 162 (245)
T 3nfj_J 83 LSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWV 162 (245)
T ss_dssp GGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred hhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEE
Confidence 999999999999822 22233344555552 22566555444443455699999999994434544 899999
Q ss_pred CCCCCCcCCC-------------ceEEeeeceEEEeccCCCC-CeEEEEEEEcCCCc
Q psy17058 219 PDNDGKFGPD-------------VEVYQELGVLRFNNIATGD-EGKYTCIAENSAGK 261 (471)
Q Consensus 219 ~~~~~~~~~~-------------~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~ 261 (471)
++..+..... ...+...+.|.|......| .|.|+|.+.|....
T Consensus 163 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~ 219 (245)
T 3nfj_J 163 NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp TTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCC
Confidence 9876433211 1112223468888888788 77999999987543
No 314
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.71 E-value=5.2e-18 Score=150.14 Aligned_cols=163 Identities=15% Similarity=0.262 Sum_probs=93.3
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC--------------cCCCceEE--eeeceEEEeccCCCCCeEEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK--------------FGPDVEVY--QELGVLRFNNIATGDEGKYT 252 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~--------------~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~ 252 (471)
....+.+|++++|.|.+ .+.|.+.+.|+|++.... ...++... .....|.|.+++.+|+|.|.
T Consensus 31 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 109 (233)
T 3bqu_C 31 ASLSMSIGEKVTIRCIT-STDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYY 109 (233)
T ss_dssp SBC-------CCEEEEE-EEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEE
T ss_pred CeEEEecCCCEEEEEec-CCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEE
Confidence 34568899999999998 566667899998653211 12233222 22337999999999999999
Q ss_pred EEEEcCCCce-EEEEEEEEEe---CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeCCccCCCc-cc---c-
Q psy17058 253 CIAENSAGKE-VMNAYIHVLT---LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKYIAPFDRN-LE---R- 321 (471)
Q Consensus 253 C~~~~~~~~~-~~~~~l~V~~---~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~~~~~~~~-~~---~- 321 (471)
|.+.+..+.. .....|.|.. +|.+.+.+... .+.+|+.++|.|.+.|. |.+ .+.|++++..+... .. .
T Consensus 110 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 188 (233)
T 3bqu_C 110 CLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 188 (233)
T ss_dssp EEECSSSSCCBCCCCBC---CCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCC
T ss_pred EEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCH-HhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCc
Confidence 9998865432 2223455554 45555543321 23469999999999985 443 79999999877543 11 0
Q ss_pred ----cccCceeEEEEeecCCCCCeEEEEEEEcCCCc
Q psy17058 322 ----DELTSRAVYTIASVRESDAGQYKCIGKNSAGT 353 (471)
Q Consensus 322 ----~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 353 (471)
......+.|.|.....+|+|.|+|.|.|....
T Consensus 189 ~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 189 DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred cCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 01123457899999999999999999997654
No 315
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.71 E-value=5.8e-17 Score=140.91 Aligned_cols=164 Identities=14% Similarity=0.236 Sum_probs=111.5
Q ss_pred cCCceeecCCCcEEEEee-CCCC--CCeEEEEeCCC-CC------------------CCCCcc-------cCcEEEEcCC
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQ-EQ------------------LPPNMI-------AGETLIINGI 147 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~-~~------------------~~~~~~-------~~~~L~i~~v 147 (471)
+|..+.+.+|++++|.|. .+.+ .+.+.|+|++. .. ...+.. ...+|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 85 (210)
T 3d9a_H 6 ESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSV 85 (210)
T ss_dssp EESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCC
Confidence 366778999999999999 5544 47899998631 11 111211 1238999999
Q ss_pred CCCCCeEEEEEEEecCCceeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCCC
Q psy17058 148 TKADEGVYICSIQNAQGNVFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDGK 224 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~~ 224 (471)
+.+|+|.|+|.+.+.. . ......+.|.. ..+|.+...+.. ..+.+|+.++|.|.+....|.+ .++|++++..+.
T Consensus 86 ~~~D~G~Y~C~~~~~~-~-~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~ 162 (210)
T 3d9a_H 86 TTEDTATYYCANWDGD-Y-WGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSG 162 (210)
T ss_dssp CGGGCEEEEEEETTSS-C-BCCCEEEEECCCCCBCCEEEEECCT-TSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred CcccCEEEEEEEecCc-c-cccceEEEeccCCCCCCEEEEecCC-cccccCCcEEEEEEEeeEecCCcEEEEeeCCcccc
Confidence 9999999999998753 1 22334566652 234555544432 2456899999999995444877 999999887532
Q ss_pred cCCCc-----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEE
Q psy17058 225 FGPDV-----EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVM 264 (471)
Q Consensus 225 ~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 264 (471)
..... ......+.|.|..+..+| |.|+|.|.|..+....
T Consensus 163 ~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 163 VHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp EEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred eEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 21111 111224568999988877 9999999998776543
No 316
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.71 E-value=4.7e-17 Score=147.26 Aligned_cols=171 Identities=16% Similarity=0.272 Sum_probs=114.5
Q ss_pred CCCcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCC-CCCC-----------------C-CCcc------cCcEEEE
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDN-QEQL-----------------P-PNMI------AGETLII 144 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~-~~~~-----------------~-~~~~------~~~~L~i 144 (471)
..+.+...|..+.+.+|++++|.|....+.+.+.|+|.. +... . .+.. ...+|+|
T Consensus 25 ~~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 25 GGAGVSQTPSNKVTEKGKYVELRCDPISGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp --SSCBCCCSEEEEETTCCEEEEEBCBTTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred cCceeEeCCCEEEecCCCCEEEEEEeCCCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 345666777888999999999999944677899999931 1110 0 1111 2568999
Q ss_pred cCCCCCCCeEEEEEEEecC-CceeeeeEEEEEee----ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEe
Q psy17058 145 NGITKADEGVYICSIQNAQ-GNVFQDYASIQVDK----REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIR 218 (471)
Q Consensus 145 ~~v~~~D~G~Y~C~~~~~~-~~~~~~~~~l~v~~----~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~ 218 (471)
.+++.+|+|.|+|.+.+.. .........+.|.. ..+|.+.+.......+.+|+.++|.|.+....|.+ .++|++
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~ 184 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 184 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE
Confidence 9999999999999999742 11133344566652 12566555544444566799999999994434544 899999
Q ss_pred CCCCCCcCCC-------------ceEEeeeceEEEeccCCCC-CeEEEEEEEcCCC
Q psy17058 219 PDNDGKFGPD-------------VEVYQELGVLRFNNIATGD-EGKYTCIAENSAG 260 (471)
Q Consensus 219 ~~~~~~~~~~-------------~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~ 260 (471)
+|..+..... .......+.|.|.....+| +|.|+|.+.|...
T Consensus 185 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l 240 (268)
T 3pl6_D 185 NGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 240 (268)
T ss_dssp SSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCC
Confidence 9876532210 0111223457888887777 9999999998753
No 317
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.71 E-value=2.2e-16 Score=133.28 Aligned_cols=148 Identities=16% Similarity=0.223 Sum_probs=102.3
Q ss_pred CceeecCCCcEEEEee-CC-CCCCeEEEEeCCCCC------------C-C---CCc---ccCcEEEEcCCCCCCCeEEEE
Q psy17058 99 RQQSAPEGSQVTIECK-SN-DPSATIKWSKDNQEQ------------L-P---PNM---IAGETLIINGITKADEGVYIC 157 (471)
Q Consensus 99 ~~~~v~~G~~v~l~C~-~~-~p~~~v~W~~~~~~~------------~-~---~~~---~~~~~L~i~~v~~~D~G~Y~C 157 (471)
..+.+.+|++|+|.|. .. .+.+.+.|+|.++.. . . .+. ..+++|+|.+++.+|+|.|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 4578999999999999 33 346799999952211 1 0 111 145789999999999999999
Q ss_pred EEEecCCceeeeeEEEEEeecc-CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeec
Q psy17058 158 SIQNAQGNVFQDYASIQVDKRE-MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELG 236 (471)
Q Consensus 158 ~~~~~~~~~~~~~~~l~v~~~~-~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 236 (471)
.+.+.. . ......|.|.... .|.+ ...++.++|.|.+..+ |.+.+.|++++..+. .....
T Consensus 87 ~v~~~~-~-~~~~~~L~V~~~~~~P~i---------~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~-------~~~~~ 147 (180)
T 2dru_A 87 RMLHET-E-DQWKITMEVYEMVSKPMI---------YWECSNATLTCEVLEG-TDVELKLYQGKEHLR-------SLRQK 147 (180)
T ss_dssp EEESSS-E-EEEEEEEEEECCCCCCEE---------EEEGGGTEEEEECSSC-TTCEEEEEETTEEEE-------EESSS
T ss_pred EEEcCC-e-EEEEEEEEEECCCCCCEE---------EecCCCEEEEEEeCCC-CCCEEEEEECCeECc-------CCCCC
Confidence 998765 3 4445556654321 1222 1245679999999555 889999999987643 11234
Q ss_pred eEEEeccCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 237 VLRFNNIATGDEGKYTCIAENSAGKEVMNAY 267 (471)
Q Consensus 237 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 267 (471)
+|.+.. .+|+|.|+|.|.|..+.......
T Consensus 148 ~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 148 TMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp EEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred EEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 565533 78999999999999877655443
No 318
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.71 E-value=4.9e-17 Score=145.02 Aligned_cols=169 Identities=17% Similarity=0.209 Sum_probs=114.7
Q ss_pred CcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCC-------------CC-----CCC-CCcc------cCcEEEEcC
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDN-------------QE-----QLP-PNMI------AGETLIING 146 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~-------------~~-----~~~-~~~~------~~~~L~i~~ 146 (471)
+.+...|..+.+.+|++++|.|..+.+.+.+.|+|.. +. .+. .+.. ...+|.|.+
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 82 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNCDPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQP 82 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEEECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECS
T ss_pred cceEeCCceEEecCCCCEEEEEEcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECC
Confidence 4567778889999999999999866778899999921 10 011 1111 245899999
Q ss_pred CCCCCCeEEEEEEEecC---CceeeeeEEEEEee----ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEe
Q psy17058 147 ITKADEGVYICSIQNAQ---GNVFQDYASIQVDK----REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIR 218 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~---~~~~~~~~~l~v~~----~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~ 218 (471)
++.+|+|.|.|.+.+.. .........+.|.. ..+|.+.+..+....+.+|+.++|.|.+....|.+ .+.|++
T Consensus 83 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~ 162 (245)
T 4ei6_B 83 TALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 162 (245)
T ss_dssp CCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEE
Confidence 99999999999998532 11133445566652 13565655544444556799999999994445554 899999
Q ss_pred CCCCCCcCCC-------------ceEEeeeceEEEeccCCCC-CeEEEEEEEcCCC
Q psy17058 219 PDNDGKFGPD-------------VEVYQELGVLRFNNIATGD-EGKYTCIAENSAG 260 (471)
Q Consensus 219 ~~~~~~~~~~-------------~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~ 260 (471)
+|..+..... ...+...+.|.|......| .|.|+|.+.|...
T Consensus 163 ~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 163 NGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp TTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred CCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCC
Confidence 8876433211 0111113458888888888 9999999998653
No 319
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.71 E-value=4.1e-18 Score=149.11 Aligned_cols=171 Identities=13% Similarity=0.177 Sum_probs=112.5
Q ss_pred cCCCCcEEEcCCcee--ecCCCcEEEEee-CCC---C-CCeEEEEeCCCCCCCCCc------------ccCcEEEEcCCC
Q psy17058 88 SPQANEVQVTPRQQS--APEGSQVTIECK-SND---P-SATIKWSKDNQEQLPPNM------------IAGETLIINGIT 148 (471)
Q Consensus 88 ~~~~~~v~~~p~~~~--v~~G~~v~l~C~-~~~---p-~~~v~W~~~~~~~~~~~~------------~~~~~L~i~~v~ 148 (471)
...+|.+.+.|.... +.+|++++|.|. .+. | .+.|.|+|++ ..+.... .....|.|.+++
T Consensus 6 ~~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~ 84 (218)
T 2rgs_A 6 LEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNN-VEVHTAQTQTHREDYNSTIRVVSTLPIQHQD 84 (218)
T ss_dssp ---CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETT-EEECCCEEEEEEETTTTEEEEEEEEECCHHH
T ss_pred CCCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECC-ccccCcccccccccCCCeEEEEEEEEEcHHH
Confidence 346778888777666 899999999999 544 3 3789999994 4333211 123479999999
Q ss_pred CCCCeEEEEEEEecCCceeeeeEEEE--EeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCCCc
Q psy17058 149 KADEGVYICSIQNAQGNVFQDYASIQ--VDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDGKF 225 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~~~~~~~~~l~--v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~~~ 225 (471)
.+|+|.|+|.+.|..+. ......+. +.+..+|.+.+.+..... .+|+.++|.|.+....|.+ .++|++++..+..
T Consensus 85 ~~D~g~Y~C~~~~~~~~-~~~~~~v~~~~~~~~~P~v~~~~~~~~~-~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~ 162 (218)
T 2rgs_A 85 WMSGKEFKCKVNNKDLP-SPIERTISKIKGLVRAPQVYILPPPAEQ-LSRKDVSLTCLVVGFNPGDISVEWTSNGHTEEN 162 (218)
T ss_dssp HHTTCCEEEEEEETTCS-SCEEEEECCCCCCCBCCEEEEECCCGGG-TTSSEEEEEEEEEEEBSSCCEEEEEETTEEECC
T ss_pred cCCCCeEEEEEECCcCC-CcceEEEeecCCCCCCCEEEEECCChHH-hcCCceEEEEEEEeeeCCCcEEEEEECCEeccC
Confidence 99999999999998664 21222332 244566777666544322 3599999999994436665 9999999876422
Q ss_pred CCCceE-Eeee------ceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 226 GPDVEV-YQEL------GVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 226 ~~~~~~-~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
...... ...+ +.|.|.....+|.|.|+|.+.|....
T Consensus 163 ~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 163 YKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred ceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 111111 1112 23555555555799999999997654
No 320
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.71 E-value=1.2e-16 Score=142.49 Aligned_cols=166 Identities=17% Similarity=0.281 Sum_probs=114.1
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCC----------------CCcCCCceEEee---eceEEEeccCCCCCe
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDND----------------GKFGPDVEVYQE---LGVLRFNNIATGDEG 249 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~----------------~~~~~~~~~~~~---~~~l~i~~~~~~d~G 249 (471)
....+.+|+.++|.|.+ .+.+.+.+.|+|.... .....++.+... ...|.|.+++.+|+|
T Consensus 9 ~~v~v~~G~~v~L~C~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G 87 (245)
T 3nfj_J 9 ATLVQPVGSPLSLECTV-EGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSG 87 (245)
T ss_dssp SEEEEETTCCEEEEEEE-ESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCE
T ss_pred ceEEecCCCCEEEEEEe-cCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCE
Confidence 45578899999999999 6778899999993211 011234444331 347999999999999
Q ss_pred EEEEEEEcCCC------ceEEEEEEEEEe------CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeCCccC
Q psy17058 250 KYTCIAENSAG------KEVMNAYIHVLT------LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKYIAPF 315 (471)
Q Consensus 250 ~Y~C~~~~~~~------~~~~~~~l~V~~------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~~~~~ 315 (471)
.|.|.+.+..+ .......|.|.. +|.+.+.+.....+.+|+.+.|.|.+.|. |++ .+.|+++|..+
T Consensus 88 ~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l 167 (245)
T 3nfj_J 88 FYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEV 167 (245)
T ss_dssp EEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEEC
Confidence 99999998322 222345677765 45554433322234569999999999984 544 79999999887
Q ss_pred CCcccc-------------cccCceeEEEEeecCCCC-CeEEEEEEEcCCCceE
Q psy17058 316 DRNLER-------------DELTSRAVYTIASVRESD-AGQYKCIGKNSAGTEE 355 (471)
Q Consensus 316 ~~~~~~-------------~~~~~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~ 355 (471)
...... ......+.|.|.....+| .|.|+|.|.|......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 168 HSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp CTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred CCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 643211 111223578888888888 6799999999876554
No 321
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.70 E-value=1e-16 Score=139.96 Aligned_cols=171 Identities=18% Similarity=0.199 Sum_probs=106.2
Q ss_pred ceeEEcCCeEEEEEEccC-CCCCCeEEEEeCCCCCC------------------cCCCceEEee--eceEEEeccCCCCC
Q psy17058 190 SQTFIVGDRADIQCVLEA-GEPSPTQTWIRPDNDGK------------------FGPDVEVYQE--LGVLRFNNIATGDE 248 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~-~~p~~~v~W~~~~~~~~------------------~~~~~~~~~~--~~~l~i~~~~~~d~ 248 (471)
...+.+|++++|.|.+.. ..+...+.|+|...... ...++.+... ...|.|.+++.+|+
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (215)
T 3nl4_H 8 GRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDT 87 (215)
T ss_dssp CCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGC
T ss_pred CEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccC
Confidence 456889999999999832 23457899998532211 1223333221 23599999999999
Q ss_pred eEEEEEEEcCCCc----eEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEeecCC--CeEEEEeCCccCCCc
Q psy17058 249 GKYTCIAENSAGK----EVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATGRPM--PTVSWVKYIAPFDRN 318 (471)
Q Consensus 249 G~Y~C~~~~~~~~----~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~i~W~~~~~~~~~~ 318 (471)
|.|.|.+.+..+. ......|.|. .+|.+...+.. ..+.+|+.++|.|.+.+.++ ..+.|++++..+...
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~ 166 (215)
T 3nl4_H 88 ATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPC-CGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVR 166 (215)
T ss_dssp EEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCC-TTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred EEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCC-ccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeE
Confidence 9999999987542 2233456665 45555433222 24567999999999998544 368899998755422
Q ss_pred ccccccCceeEEEE---eecCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 319 LERDELTSRAVYTI---ASVRESDAGQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 319 ~~~~~~~~~~~l~i---~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
.........+.+.+ ..+...| |.|+|.|.|..+.......|.+
T Consensus 167 ~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~~ 212 (215)
T 3nl4_H 167 TFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVAP 212 (215)
T ss_dssp ECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECCS
T ss_pred ecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecCC
Confidence 11111112223333 4466667 9999999999988776666543
No 322
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.70 E-value=5.5e-16 Score=136.02 Aligned_cols=168 Identities=13% Similarity=0.236 Sum_probs=111.4
Q ss_pred CCceeecCCCcEEEEee-CCCC--CCeEEEEeCCC-CC-------------------CCCCcc-------cCcEEEEcCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQ-EQ-------------------LPPNMI-------AGETLIINGI 147 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~-~~-------------------~~~~~~-------~~~~L~i~~v 147 (471)
|..+.+.+|++|+|.|. .+.+ .+.+.|+|... .. ...+.. ...+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 45788999999999999 5544 47899998631 11 011111 1348999999
Q ss_pred CCCCCeEEEEEEEecCC---c--eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEe-
Q psy17058 148 TKADEGVYICSIQNAQG---N--VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIR- 218 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~---~--~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~- 218 (471)
+.+|+|.|.|.+.+..+ . .......|.|.. ..+|.+....+.. .+.+|+.++|.|.+....|.+ .++|++
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 165 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCE-NSNPSSTVAVGCLAQDFLPDSITFSWKYK 165 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTT-CCCSSSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCc-ccCCCCcEEEEEEEEEEeCCCeEEEeEcc
Confidence 99999999999988652 1 122334566652 2345555432222 356899999999995445776 999999
Q ss_pred CCCCCCcC---CC---ceEEeeeceEEEeccCC--CCCeEEEEEEEcCCCceEEEE
Q psy17058 219 PDNDGKFG---PD---VEVYQELGVLRFNNIAT--GDEGKYTCIAENSAGKEVMNA 266 (471)
Q Consensus 219 ~~~~~~~~---~~---~~~~~~~~~l~i~~~~~--~d~G~Y~C~~~~~~~~~~~~~ 266 (471)
++..+... .. ...+...+.|.|..... +|.|.|+|.+.|..+.....+
T Consensus 166 ~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 166 NNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp TSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 77664320 00 01122245688887776 789999999999887765443
No 323
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.70 E-value=1.6e-16 Score=139.12 Aligned_cols=169 Identities=15% Similarity=0.271 Sum_probs=114.0
Q ss_pred cCCceeecCCCcEEEEee-CCCC--CCeEEEEeCCCCC----C------------------CCCcc-------cCcEEEE
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQEQ----L------------------PPNMI-------AGETLII 144 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~~~----~------------------~~~~~-------~~~~L~i 144 (471)
+|..+.+.+|++++|.|. .+.+ .+.+.|+|++... + ..+.. ....|+|
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (220)
T 1pz5_B 6 ESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQM 85 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEE
Confidence 356788999999999999 5554 6899999963111 0 11111 1238999
Q ss_pred cCCCCCCCeEEEEEEEecCCce--eeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeC
Q psy17058 145 NGITKADEGVYICSIQNAQGNV--FQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRP 219 (471)
Q Consensus 145 ~~v~~~D~G~Y~C~~~~~~~~~--~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~ 219 (471)
.+++.+|+|.|+|.+.+..+.. ......+.|.. ..+|.+...++.. .+.+|+.++|.|.+....|.+ .++|+++
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 164 (220)
T 1pz5_B 86 NNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGC-SDTSGSSVTLGCLVKGYFPEPVTVKWNYG 164 (220)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCS-CCSCSSSEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEccccc-ccCCCCcEEEEEEEEEEeCCCeEEEEecC
Confidence 9999999999999999865321 12345666653 2345555444322 356899999999995444887 9999998
Q ss_pred CCCCC---cCCCc--eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 220 DNDGK---FGPDV--EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAY 267 (471)
Q Consensus 220 ~~~~~---~~~~~--~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 267 (471)
+.... ..... ......+.|.|..+..+| |.|+|.|.|..+.....+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 165 ALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp TCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 87411 11000 122235678999888866 9999999998887655443
No 324
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.70 E-value=1.8e-17 Score=146.23 Aligned_cols=174 Identities=13% Similarity=0.196 Sum_probs=114.4
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCC--CeEEEEeCCCCC-CcCCCce------EEeeeceEEEeccCCCCCeE
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPS--PTQTWIRPDNDG-KFGPDVE------VYQELGVLRFNNIATGDEGK 250 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~--~~v~W~~~~~~~-~~~~~~~------~~~~~~~l~i~~~~~~d~G~ 250 (471)
+|.+.+..+....+.+|+.++|.|.+....|. ..++|++++..+ ....... .+.....|.|.++..+|+|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 34554444444456789999999999444563 499999998875 2211111 01123469999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEE----EeCCceeeCCCccEEecCCCcEEEEEEEeec-CC-CeEEEEeCCccCCCccc----
Q psy17058 251 YTCIAENSAGKEVMNAYIHV----LTLPAVTITPSEYVSVRPGEPLTLECEATGR-PM-PTVSWVKYIAPFDRNLE---- 320 (471)
Q Consensus 251 Y~C~~~~~~~~~~~~~~l~V----~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~i~W~~~~~~~~~~~~---- 320 (471)
|+|.+.|..+.......+.+ ..+|.+.+.+.....+ .+..+.|.|.+.|. |+ +.|.|+++|..+.....
T Consensus 92 Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 170 (231)
T 2w59_A 92 FTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTA 170 (231)
T ss_dssp EEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECC
T ss_pred EEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCc
Confidence 99999997755333333322 1355555443221122 25579999999995 43 69999999988754321
Q ss_pred --c------------cccCceeEEEEeecCCCCCeEEEEEEEcCCCce
Q psy17058 321 --R------------DELTSRAVYTIASVRESDAGQYKCIGKNSAGTE 354 (471)
Q Consensus 321 --~------------~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 354 (471)
. ......+.|.|.....+|.|.|+|.|.|.....
T Consensus 171 ~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~~ 218 (231)
T 2w59_A 171 VLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALPM 218 (231)
T ss_dssp CEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTSTT
T ss_pred cccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCCC
Confidence 0 011123568888888889999999999987654
No 325
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.70 E-value=1.1e-16 Score=144.72 Aligned_cols=165 Identities=14% Similarity=0.202 Sum_probs=113.2
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCC--CCCC---------------cC-CCceEEee---eceEEEeccCCC
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPD--NDGK---------------FG-PDVEVYQE---LGVLRFNNIATG 246 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~--~~~~---------------~~-~~~~~~~~---~~~l~i~~~~~~ 246 (471)
+....+.+|++++|.|.+ . .+...+.|+|.. .... .. .++.+... ...|.|.+++.+
T Consensus 33 p~~v~v~~G~~v~L~C~~-~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 110 (268)
T 3pl6_D 33 PSNKVTEKGKYVELRCDP-I-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERG 110 (268)
T ss_dssp CSEEEEETTCCEEEEEBC-B-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGG
T ss_pred CCEEEecCCCCEEEEEEe-C-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcc
Confidence 345678899999999998 3 577899999932 2110 01 34443321 457999999999
Q ss_pred CCeEEEEEEEcC--CCceEEEEEEEEEe------CCceeeCCCccEEecCCCcEEEEEEEeecCCC--eEEEEeCCccCC
Q psy17058 247 DEGKYTCIAENS--AGKEVMNAYIHVLT------LPAVTITPSEYVSVRPGEPLTLECEATGRPMP--TVSWVKYIAPFD 316 (471)
Q Consensus 247 d~G~Y~C~~~~~--~~~~~~~~~l~V~~------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~--~i~W~~~~~~~~ 316 (471)
|+|.|.|.+.+. .........|.|.. +|.+.+.......+.+|+.++|.|.+.|.+++ .+.|+++|..+.
T Consensus 111 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~ 190 (268)
T 3pl6_D 111 DSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 190 (268)
T ss_dssp GCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEEC
T ss_pred cCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECC
Confidence 999999999974 22333445677765 45555443333345569999999999985554 899999998875
Q ss_pred Ccccc-------------cccCceeEEEEeecCCCC-CeEEEEEEEcCCCce
Q psy17058 317 RNLER-------------DELTSRAVYTIASVRESD-AGQYKCIGKNSAGTE 354 (471)
Q Consensus 317 ~~~~~-------------~~~~~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~ 354 (471)
..... ......+.|.|.....+| .|.|+|.|.|.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~~ 242 (268)
T 3pl6_D 191 SGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 242 (268)
T ss_dssp TTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred CCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCCC
Confidence 43111 112223567888887777 999999999986554
No 326
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.70 E-value=2.1e-16 Score=141.92 Aligned_cols=168 Identities=17% Similarity=0.216 Sum_probs=113.0
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCC--CCC-----------------cCCCceEEee----eceEEEeccC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDN--DGK-----------------FGPDVEVYQE----LGVLRFNNIA 244 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~--~~~-----------------~~~~~~~~~~----~~~l~i~~~~ 244 (471)
...+.+|++++|.|.+ .+.+ ...+.|+|+.. .+. ...++.+..+ ...|.|.+++
T Consensus 15 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 93 (261)
T 2xqy_G 15 AELVKPGASVKMSCKA-SGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLT 93 (261)
T ss_dssp EEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CEEEcCCCCEEEEEEe-CCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCC
Confidence 4567899999999999 5554 57899998742 111 1234444332 3479999999
Q ss_pred CCCCeEEEEEEEcCCCc---eEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeCCccC
Q psy17058 245 TGDEGKYTCIAENSAGK---EVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKYIAPF 315 (471)
Q Consensus 245 ~~d~G~Y~C~~~~~~~~---~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~~~~~ 315 (471)
.+|+|.|.|.+.+..+. ....+.|.|.. +|.+.+.+.. ..+.+|+.++|.|.+.+. |.+ .+.|++++..+
T Consensus 94 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~-~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~ 172 (261)
T 2xqy_G 94 SEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 172 (261)
T ss_dssp GGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCC-CC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCT
T ss_pred cccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCC-ccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcC
Confidence 99999999999986431 11235677764 3444443222 235679999999999984 776 99999998765
Q ss_pred CCccc-----ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 316 DRNLE-----RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITV 360 (471)
Q Consensus 316 ~~~~~-----~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 360 (471)
..... .......+.|.|.....+| |.|+|.|.|..........+
T Consensus 173 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~~~~ 221 (261)
T 2xqy_G 173 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKI 221 (261)
T ss_dssp TEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred ceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEEEEe
Confidence 32100 0112234678998888888 99999999977665444433
No 327
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.70 E-value=6.8e-16 Score=141.26 Aligned_cols=163 Identities=17% Similarity=0.263 Sum_probs=108.1
Q ss_pred EcCCceeecCCCcEEEEee-CCCC--CCeEEEEeCCCC-CC-------------------CCCcc-------cCcEEEEc
Q psy17058 96 VTPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQE-QL-------------------PPNMI-------AGETLIIN 145 (471)
Q Consensus 96 ~~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~~-~~-------------------~~~~~-------~~~~L~i~ 145 (471)
..|..+.+.+|++++|.|. .+.+ .+.+.|+|+... .. ..+.. ...+|+|.
T Consensus 27 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 106 (291)
T 2gki_A 27 QQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELS 106 (291)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEEC
T ss_pred EcCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEEC
Confidence 3466889999999999999 6555 578999996321 11 11111 13479999
Q ss_pred CCCCCCCeEEEEEEEecC-C--c-eeeeeEEEEEeec------------c-CCeeeecCCCceeEEcCCeEEEEEEccCC
Q psy17058 146 GITKADEGVYICSIQNAQ-G--N-VFQDYASIQVDKR------------E-MPRIRIHPNASQTFIVGDRADIQCVLEAG 208 (471)
Q Consensus 146 ~v~~~D~G~Y~C~~~~~~-~--~-~~~~~~~l~v~~~------------~-~p~~~~~~~~~~~v~~g~~~~L~C~~~~~ 208 (471)
+++.+|+|.|.|.+.+.. + . .......|.|... . .+......+....+.+|++++|.|.+ .+
T Consensus 107 ~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~-~~ 185 (291)
T 2gki_A 107 SLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKS-SQ 185 (291)
T ss_dssp SCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEE-SS
T ss_pred cCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEc-CC
Confidence 999999999999999864 1 1 1112345555531 0 11222223345568899999999999 55
Q ss_pred CCCC------eEEEEeCC--CCCCc------------CCCceEEee--eceEEEeccCCCCCeEEEEEEEcCC
Q psy17058 209 EPSP------TQTWIRPD--NDGKF------------GPDVEVYQE--LGVLRFNNIATGDEGKYTCIAENSA 259 (471)
Q Consensus 209 ~p~~------~v~W~~~~--~~~~~------------~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~ 259 (471)
.+.+ .+.|+|+. ..... ..++..... ...|.|.+++.+|+|.|+|.+.|..
T Consensus 186 ~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 186 SLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp CCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred ccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 5554 89999974 22110 223333221 2479999999999999999998853
No 328
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.70 E-value=1.3e-16 Score=140.34 Aligned_cols=164 Identities=16% Similarity=0.264 Sum_probs=109.8
Q ss_pred CCceeecCCCcEEEEee-CCCC--CCeEEEEeCC-CCCC-------------------CCCcc-------cCcEEEEcCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDP--SATIKWSKDN-QEQL-------------------PPNMI-------AGETLIINGI 147 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~-~~~~-------------------~~~~~-------~~~~L~i~~v 147 (471)
|..+.+.+|++++|.|. .+.+ .+.+.|+|+. +... ..+.. ....|+|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 55678999999999999 6555 6789999863 1111 11111 1358999999
Q ss_pred CCCCCeEEEEEEEecCC-----c--eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEE
Q psy17058 148 TKADEGVYICSIQNAQG-----N--VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWI 217 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~-----~--~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~ 217 (471)
+.+|+|.|.|.+.+..+ . .......|.|.. ..+|.+....+.. .+.+|+.++|.|.+....|.+ .++|+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~ 165 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSWN 165 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEEBSSCCEEECC
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeEECCCeEEEEe
Confidence 99999999999998754 1 122345666653 2245554433322 346899999999995444765 99999
Q ss_pred eCCCCCCcCCCc------eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceE
Q psy17058 218 RPDNDGKFGPDV------EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEV 263 (471)
Q Consensus 218 ~~~~~~~~~~~~------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 263 (471)
+++..+...... ..+...+.|.|..+..+| |.|+|.|.|..+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp TTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred cCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 988753211000 011123468999998888 999999999765433
No 329
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.69 E-value=5.3e-16 Score=139.84 Aligned_cols=161 Identities=17% Similarity=0.243 Sum_probs=110.8
Q ss_pred CceeEEcCCeEEEEEEccCCCC------CCeEEEEeCC--CCCC------------cCCCceEEee--eceEEEeccCCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP------SPTQTWIRPD--NDGK------------FGPDVEVYQE--LGVLRFNNIATG 246 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p------~~~v~W~~~~--~~~~------------~~~~~~~~~~--~~~l~i~~~~~~ 246 (471)
....+.+|++++|.|.+ .+.+ .+.+.|+|.. .... ...++.+... ...|.|.+++.+
T Consensus 13 ~~v~v~~G~~v~L~C~~-~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 91 (264)
T 2gjj_A 13 SSLPVSVGEKVTMTCKS-SQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAE 91 (264)
T ss_dssp SEEEEETTCCEEEEEEE-SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeEEecCCCcEEEEeEc-CCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHH
Confidence 45578899999999998 5555 5789999963 2211 1234444321 347999999999
Q ss_pred CCeEEEEEEEcCCCc-eEEEEEEEEEeCC------------------ceeeCCCccEEecCCCcEEEEEEEeecCC--Ce
Q psy17058 247 DEGKYTCIAENSAGK-EVMNAYIHVLTLP------------------AVTITPSEYVSVRPGEPLTLECEATGRPM--PT 305 (471)
Q Consensus 247 d~G~Y~C~~~~~~~~-~~~~~~l~V~~~p------------------~~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~ 305 (471)
|+|.|.|.+.+..+. ....+.|.|..+| .+.+.......+.+|++++|.|.+.+.+. +.
T Consensus 92 DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 171 (264)
T 2gjj_A 92 DLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSFTGYF 171 (264)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSE
T ss_pred HCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCccCCeE
Confidence 999999999886542 2233567777653 22222222347899999999999998764 79
Q ss_pred EEEEeCC--ccCCC-----------------ccc--c--cccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 306 VSWVKYI--APFDR-----------------NLE--R--DELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 306 i~W~~~~--~~~~~-----------------~~~--~--~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
+.|+++. ..+.. ..+ . .......+|.|.+++.+|+|.|+|.|.|.
T Consensus 172 v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 172 INWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 9999974 22110 000 0 01224578999999999999999999995
No 330
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.69 E-value=6.3e-16 Score=135.47 Aligned_cols=162 Identities=16% Similarity=0.327 Sum_probs=110.5
Q ss_pred ceeEEcCCeEEEEEEccCCC--CCCeEEEEeCCCCCC---------------------cCCCceEEee----eceEEEec
Q psy17058 190 SQTFIVGDRADIQCVLEAGE--PSPTQTWIRPDNDGK---------------------FGPDVEVYQE----LGVLRFNN 242 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~--p~~~v~W~~~~~~~~---------------------~~~~~~~~~~----~~~l~i~~ 242 (471)
...+.+|+.++|.|.+ .+. +...+.|+|...... ...++.+..+ ...|.|.+
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 87 (221)
T 3m8o_H 9 GGLVQPGGSLKLSCAA-SGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNS 87 (221)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECS
T ss_pred CEEEcCCCCEEEEEEc-ccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECC
Confidence 4567899999999998 443 357899998542211 1234444332 22699999
Q ss_pred cCCCCCeEEEEEEEcCC--CceEEEEEEEEE----eCCcee-eCCCccEEecCCCcEEEEEEEee-cCC-C-eEEEEeCC
Q psy17058 243 IATGDEGKYTCIAENSA--GKEVMNAYIHVL----TLPAVT-ITPSEYVSVRPGEPLTLECEATG-RPM-P-TVSWVKYI 312 (471)
Q Consensus 243 ~~~~d~G~Y~C~~~~~~--~~~~~~~~l~V~----~~p~~~-~~~~~~~~~~~g~~v~l~C~~~g-~p~-~-~i~W~~~~ 312 (471)
++.+|+|.|.|.+.+.. ........|.|. .+|.+. ..+.. . .+|+.++|.|.+.+ .|. + .+.|++++
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~--~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~g 164 (221)
T 3m8o_H 88 LKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCS--T-QPDGNVVIACLVQGFFPQEPLSVTWSESG 164 (221)
T ss_dssp CCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCS--C-CCTTEEEEEEEEEEEBSSCSEEEEESCCS
T ss_pred CCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCcc--c-ccCCCEEEEEEEEeeECCCCEEEEEEECC
Confidence 99999999999999863 222333456665 234443 22222 2 68999999999998 776 4 89999999
Q ss_pred ccCCCcc-------cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy17058 313 APFDRNL-------ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEE 355 (471)
Q Consensus 313 ~~~~~~~-------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 355 (471)
..+.... ........+.|.|.....+|.|.|+|.|.|..+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 165 QGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp TTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred EECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 8773211 011122345699999999999999999999887653
No 331
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.69 E-value=2.7e-16 Score=141.46 Aligned_cols=175 Identities=20% Similarity=0.198 Sum_probs=110.7
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc-------------------CCCceE----EeeeceEEEeccCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF-------------------GPDVEV----YQELGVLRFNNIAT 245 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~-------------------~~~~~~----~~~~~~l~i~~~~~ 245 (471)
....+.+|++++|.|.+ .+.+.+.+.|+|....... ..+... ......|.|.+++.
T Consensus 10 ~~~~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 88 (259)
T 3omz_A 10 KSVIRQTGSSAEITCDL-AEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIE 88 (259)
T ss_dssp -CEEEETTCCEEEECCC------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCG
T ss_pred ceeEecCCCcEEEEEEE-ccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCc
Confidence 45678899999999999 6677889999984221000 001111 11234699999999
Q ss_pred CCCeEEEEEEEcCCC---ceEEEEEEEEEeC-----------------CceeeCCCccEEecCCCcEEEEEEEeec-CCC
Q psy17058 246 GDEGKYTCIAENSAG---KEVMNAYIHVLTL-----------------PAVTITPSEYVSVRPGEPLTLECEATGR-PMP 304 (471)
Q Consensus 246 ~d~G~Y~C~~~~~~~---~~~~~~~l~V~~~-----------------p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~ 304 (471)
+|+|.|.|.+.+..+ .......|.|... +.+... .....+.+|++++|.|.+.+. |.+
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~ 167 (259)
T 3omz_A 89 NDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQA-QSSVSMPVRKAVTLNCLYETSWWSY 167 (259)
T ss_dssp GGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECC-CCCEEEETTCCEEECCEEECCCSSC
T ss_pred ccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEe-CCEEEEcCCCCEEEEEECCCccCCc
Confidence 999999999998765 2333456777653 233333 345788999999999998874 778
Q ss_pred eEEEEeCCccCC----------------Cccccc--ccCceeEEEEeecCCCCCeEEEEEEEcCCCc-----eEEEEEEE
Q psy17058 305 TVSWVKYIAPFD----------------RNLERD--ELTSRAVYTIASVRESDAGQYKCIGKNSAGT-----EEKVITVA 361 (471)
Q Consensus 305 ~i~W~~~~~~~~----------------~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~ 361 (471)
.+.|++...... ...... .......|+|.+++.+|+|.|+|.|.+..+. ...-..|.
T Consensus 168 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~fg~GT~l~ 247 (259)
T 3omz_A 168 YIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGESLTRADKLIFGKGTRVT 247 (259)
T ss_dssp EEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESCSSTTCCCEECCCEEEE
T ss_pred eEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCccCCCCceEECCCCEEE
Confidence 999998542111 000000 1233467999999999999999999864221 12224666
Q ss_pred EecC
Q psy17058 362 VEHR 365 (471)
Q Consensus 362 V~~~ 365 (471)
|...
T Consensus 248 v~~~ 251 (259)
T 3omz_A 248 VEPR 251 (259)
T ss_dssp EEC-
T ss_pred EeeC
Confidence 6654
No 332
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.69 E-value=2.4e-16 Score=140.15 Aligned_cols=176 Identities=17% Similarity=0.278 Sum_probs=113.1
Q ss_pred cEEEcCCceeecCCCcEEEEee-CCC--CCCeEEEEeCCC-CCC-------------------CCCcc-------cCcEE
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECK-SND--PSATIKWSKDNQ-EQL-------------------PPNMI-------AGETL 142 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~-~~~--p~~~v~W~~~~~-~~~-------------------~~~~~-------~~~~L 142 (471)
.+...|..+.+.+|++++|.|. .+. +...+.|+|+.. ... ..+.. ...+|
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 82 (242)
T 1hxm_B 3 HLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTL 82 (242)
T ss_dssp EEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEE
T ss_pred ccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEE
Confidence 4556677889999999999999 443 567899999631 111 11111 23579
Q ss_pred EEcCCCCCCCeEEEEEEEecCC-----c-eeeeeEEEEEeecc-----CCeeeecCCCceeEEcCCeEEEEEEccCCCCC
Q psy17058 143 IINGITKADEGVYICSIQNAQG-----N-VFQDYASIQVDKRE-----MPRIRIHPNASQTFIVGDRADIQCVLEAGEPS 211 (471)
Q Consensus 143 ~i~~v~~~D~G~Y~C~~~~~~~-----~-~~~~~~~l~v~~~~-----~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~ 211 (471)
.|.+++.+|+|.|.|.+.+... . .......|.|.... +|...+..+....+.+|+.++|.|.+....|.
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~ 162 (242)
T 1hxm_B 83 TIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPD 162 (242)
T ss_dssp EECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSC
T ss_pred EECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECC
Confidence 9999999999999999987631 1 12223456665321 23333332333345579999999999544565
Q ss_pred -CeEEEEeCCC-CCCcCC--Cce----EEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 212 -PTQTWIRPDN-DGKFGP--DVE----VYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 212 -~~v~W~~~~~-~~~~~~--~~~----~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
+.++|++++. .+.... ... .+...+.|.|..... + |.|+|.+.|..+.......+.+
T Consensus 163 ~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 163 VIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp CEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 7999999987 432211 010 111134688887765 4 9999999998876544444433
No 333
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.69 E-value=2.4e-17 Score=142.92 Aligned_cols=167 Identities=12% Similarity=0.199 Sum_probs=110.3
Q ss_pred CcEEEcC-Ccee-ecCCCcEEEEee-CCC---C-CCeEEEEeCCCCCCCCCc-------c-----cCcEEEEcCCCCCCC
Q psy17058 92 NEVQVTP-RQQS-APEGSQVTIECK-SND---P-SATIKWSKDNQEQLPPNM-------I-----AGETLIINGITKADE 152 (471)
Q Consensus 92 ~~v~~~p-~~~~-v~~G~~v~l~C~-~~~---p-~~~v~W~~~~~~~~~~~~-------~-----~~~~L~i~~v~~~D~ 152 (471)
|.+.+.| .... +.+|++++|.|. .+. | ...+.|+|++ ..+.... . ....|.|.+++.+|+
T Consensus 2 p~v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 80 (207)
T 2vol_A 2 SSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDD-VEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNG 80 (207)
T ss_dssp CEEEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETT-EEECCCEEECCCEETTTEEEEEEEEECCHHHHHTT
T ss_pred CcEEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECC-ccccccccCCCcCcCCCcEEEEEEEEEehhHcCCC
Confidence 4455544 4344 899999999999 544 2 3589999995 3332110 0 234799999999999
Q ss_pred eEEEEEEEecCCceeeeeEEEEE--eeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCcCCCc
Q psy17058 153 GVYICSIQNAQGNVFQDYASIQV--DKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKFGPDV 229 (471)
Q Consensus 153 G~Y~C~~~~~~~~~~~~~~~l~v--~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~~~~~ 229 (471)
|.|+|.+.|..+. ......+.+ .+..+|.+.+.+.... ..+|+.++|.|.+....|. +.++|++++..+......
T Consensus 81 G~Y~C~a~~~~~~-~~~~~~v~~~~~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~ 158 (207)
T 2vol_A 81 KEFKCRVNSAAFP-APIEKTISKTKGRPKAPQVYTLPPPKE-QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNT 158 (207)
T ss_dssp CCEEEEEECTTCS-SCEEEEECCCCCCCBCCEEEEECCCTG-GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEEC
T ss_pred CEEEEEEEccCCC-CceEEEeccCCCCCcCCeEEEeCCCHH-HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccC
Confidence 9999999998765 222234433 4456777766654432 2359999999999544565 599999998764322111
Q ss_pred e-EEee------eceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 230 E-VYQE------LGVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 230 ~-~~~~------~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
. .... .+.|.|.....+|.|.|+|.+.|....
T Consensus 159 ~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 159 QPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 1 1111 224566666667899999999997643
No 334
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.69 E-value=6e-16 Score=136.60 Aligned_cols=173 Identities=15% Similarity=0.238 Sum_probs=112.0
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCC--CCC----------------cCCCceEEee----eceEEEeccCC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDN--DGK----------------FGPDVEVYQE----LGVLRFNNIAT 245 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~--~~~----------------~~~~~~~~~~----~~~l~i~~~~~ 245 (471)
...+.+|+.++|.|.+ .+.+ ...+.|||... ... ...++.+..+ ...|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (232)
T 1dn0_B 9 AGLLKPSETLSLTCAV-YGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA 87 (232)
T ss_dssp CCEECTTSCEEEEEEE-ESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEeCCCcEEEEEEE-ccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCc
Confidence 3467899999999998 4443 57899998642 111 1234444331 23799999999
Q ss_pred CCCeEEEEEEEc--CCC----ceEEEEEEEEEe----CCceeeCCCccEEecCC-CcEEEEEEEeec-CCC-eEEEEe-C
Q psy17058 246 GDEGKYTCIAEN--SAG----KEVMNAYIHVLT----LPAVTITPSEYVSVRPG-EPLTLECEATGR-PMP-TVSWVK-Y 311 (471)
Q Consensus 246 ~d~G~Y~C~~~~--~~~----~~~~~~~l~V~~----~p~~~~~~~~~~~~~~g-~~v~l~C~~~g~-p~~-~i~W~~-~ 311 (471)
+|+|.|.|.+.+ ..+ .....+.|.|.. +|.+..... ...+..| +.++|.|.+.|. |.+ .+.|++ +
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p-~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~ 166 (232)
T 1dn0_B 88 ADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVS-CENSPSDTSSVAVGCLAQDFLPDSITFSWKYKN 166 (232)
T ss_dssp GGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEEC-C------CCSEEEEEEEEEEBSSCCEEEEEETT
T ss_pred ccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEecc-ccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCC
Confidence 999999999983 211 122335677764 244433211 1234578 999999999985 776 999999 8
Q ss_pred CccCCCcc------cccccCceeEEEEeecCC--CCCeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 312 IAPFDRNL------ERDELTSRAVYTIASVRE--SDAGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 312 ~~~~~~~~------~~~~~~~~~~l~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
|..+.... ........+.|.|..... +|.|.|+|.|.|..+.......+.+..
T Consensus 167 g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~~ 227 (232)
T 1dn0_B 167 NSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVIA 227 (232)
T ss_dssp SCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC--
T ss_pred CCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCCC
Confidence 87764310 001122345788888877 789999999999999887777666554
No 335
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.69 E-value=5e-16 Score=141.29 Aligned_cols=164 Identities=16% Similarity=0.288 Sum_probs=108.0
Q ss_pred cEEEcCCceeecCCCcEEEEee-CCC--CCCeEEEEeCCCCCCC--------------------CCcc-------cCcEE
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECK-SND--PSATIKWSKDNQEQLP--------------------PNMI-------AGETL 142 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~-~~~--p~~~v~W~~~~~~~~~--------------------~~~~-------~~~~L 142 (471)
.+.. |..+.+.+|++|+|.|. .+. +.+.+.|++....... .+.. ...+|
T Consensus 3 ~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (280)
T 3fku_X 3 QLVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYM 81 (280)
T ss_dssp CEEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEE
T ss_pred eEEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEE
Confidence 3444 77889999999999999 443 5678999985211110 0111 12479
Q ss_pred EEcCCCCCCCeEEEEEEEec--------CCceeeeeEEEEEee-------------ccCCeeeecCCCceeEEcCCeEEE
Q psy17058 143 IINGITKADEGVYICSIQNA--------QGNVFQDYASIQVDK-------------REMPRIRIHPNASQTFIVGDRADI 201 (471)
Q Consensus 143 ~i~~v~~~D~G~Y~C~~~~~--------~~~~~~~~~~l~v~~-------------~~~p~~~~~~~~~~~v~~g~~~~L 201 (471)
.|.+++.+|+|.|.|.+.+. ..........|.|.. ..++.+.. ++. ..+.+|++++|
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~-~p~-~~v~~G~~v~L 159 (280)
T 3fku_X 82 DLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQ-PPS-VSKGLRQTATL 159 (280)
T ss_dssp EECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBC-CSE-EEECTTCCEEE
T ss_pred EECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEe-CCc-EEEecCCCEEE
Confidence 99999999999999999886 112133344555543 11233322 222 67889999999
Q ss_pred EEEccCCCC-CCeEEEEeCC--CCCC------------cCCCceEEee--eceEEEeccCCCCCeEEEEEEEcCC
Q psy17058 202 QCVLEAGEP-SPTQTWIRPD--NDGK------------FGPDVEVYQE--LGVLRFNNIATGDEGKYTCIAENSA 259 (471)
Q Consensus 202 ~C~~~~~~p-~~~v~W~~~~--~~~~------------~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~ 259 (471)
.|.+....+ .+.+.|+|.. .... ...++.+... ...|.|.+++.+|+|.|.|.+.+..
T Consensus 160 ~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 160 TCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp EEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred EEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 999943243 4789999843 2211 1223333322 2359999999999999999998865
No 336
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.69 E-value=4.8e-16 Score=142.25 Aligned_cols=175 Identities=14% Similarity=0.268 Sum_probs=115.5
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCC--CC-----------------cCCCceEEee----eceEEEeccC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDND--GK-----------------FGPDVEVYQE----LGVLRFNNIA 244 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~--~~-----------------~~~~~~~~~~----~~~l~i~~~~ 244 (471)
...+.+|++++|.|.+ .+.+ .+.+.|+|.... .. ...++.+... ...|.|.+++
T Consensus 31 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 109 (291)
T 2gki_A 31 PELVKPGASVKMSCKA-SGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLT 109 (291)
T ss_dssp CEEECTTCCEEEEEEE-ESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCC
T ss_pred cEEecCCCCEEEEEec-cCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCC
Confidence 5678899999999998 5555 578999996421 11 1234444321 3479999999
Q ss_pred CCCCeEEEEEEEcCC-C--ce--EEEEEEEEEe----------------CCceeeCCCccEEecCCCcEEEEEEEeecCC
Q psy17058 245 TGDEGKYTCIAENSA-G--KE--VMNAYIHVLT----------------LPAVTITPSEYVSVRPGEPLTLECEATGRPM 303 (471)
Q Consensus 245 ~~d~G~Y~C~~~~~~-~--~~--~~~~~l~V~~----------------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~ 303 (471)
.+|+|.|.|.+.+.. + .. ...+.|.|.. .+.+. ..+....+.+|++++|.|.+.+.|.
T Consensus 110 ~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~-~~p~~~~v~~G~~v~L~C~~~~~~~ 188 (291)
T 2gki_A 110 SEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMS-QSPSSLAVSAGEKVTMSCKSSQSLF 188 (291)
T ss_dssp GGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEE-CSCSEEEEETTSCEEEEEEESSCCE
T ss_pred HHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEE-cCCCEEEEcCCCcEEEEEEcCCccc
Confidence 999999999999864 2 11 1234666665 12222 2233567899999999999998776
Q ss_pred C------eEEEEeCC--ccCCC--------------cccccccCceeEEEEeecCCCCCeEEEEEEEcCCCce-EEEEEE
Q psy17058 304 P------TVSWVKYI--APFDR--------------NLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE-EKVITV 360 (471)
Q Consensus 304 ~------~i~W~~~~--~~~~~--------------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l 360 (471)
+ .+.|+|+. ..+.. ...........+|+|.+++.+|+|.|+|.|.|..... ..-..|
T Consensus 189 ~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l 268 (291)
T 2gki_A 189 NSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTKL 268 (291)
T ss_dssp ETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred cccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCCEEE
Confidence 5 89999963 22110 0000112234689999999999999999999854322 122456
Q ss_pred EEecCC
Q psy17058 361 AVEHRP 366 (471)
Q Consensus 361 ~V~~~p 366 (471)
.|+..+
T Consensus 269 ~v~~~~ 274 (291)
T 2gki_A 269 EIKHHH 274 (291)
T ss_dssp EEECC-
T ss_pred EEEeeE
Confidence 666554
No 337
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.69 E-value=4e-16 Score=138.74 Aligned_cols=173 Identities=16% Similarity=0.167 Sum_probs=114.7
Q ss_pred CCceeEEcCCeEEEEEEccCC-CCCCeEEEEeCCC--CCC-----------------cCCCceEEe----eeceEEEecc
Q psy17058 188 NASQTFIVGDRADIQCVLEAG-EPSPTQTWIRPDN--DGK-----------------FGPDVEVYQ----ELGVLRFNNI 243 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~-~p~~~v~W~~~~~--~~~-----------------~~~~~~~~~----~~~~l~i~~~ 243 (471)
+....+.+|+.++|.|.+... .+...+.|+|... ... ...++.+.. ....|.|.++
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (242)
T 1hxm_B 8 QISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNV 87 (242)
T ss_dssp CSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSC
T ss_pred CceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCC
Confidence 345678899999999998332 2567899998642 110 123444432 1347999999
Q ss_pred CCCCCeEEEEEEEcCCC-----c--eEEEEEEEEEeC-------CceeeCCCccEEecCCCcEEEEEEEeec-CC-CeEE
Q psy17058 244 ATGDEGKYTCIAENSAG-----K--EVMNAYIHVLTL-------PAVTITPSEYVSVRPGEPLTLECEATGR-PM-PTVS 307 (471)
Q Consensus 244 ~~~d~G~Y~C~~~~~~~-----~--~~~~~~l~V~~~-------p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~i~ 307 (471)
+.+|+|.|.|.+.+... . ......|.|... |.+.+.......+.+|+.+.|.|.+.|. |. +.+.
T Consensus 88 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~v~ 167 (242)
T 1hxm_B 88 EKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIH 167 (242)
T ss_dssp CGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEEEE
T ss_pred CcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeEEE
Confidence 99999999999987531 1 112357777753 3333332222345679999999999986 64 6899
Q ss_pred EEeCCc-cCCCccc------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 308 WVKYIA-PFDRNLE------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 308 W~~~~~-~~~~~~~------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
|++++. .+..... .......+.|.|..... | |.|+|.|.|..+.......+.+
T Consensus 168 W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 168 WEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred EEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 999987 5532110 01112235788887765 5 9999999999987755555554
No 338
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.68 E-value=2.8e-16 Score=142.95 Aligned_cols=172 Identities=17% Similarity=0.293 Sum_probs=115.4
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCC-C-------------------CCCcc------cCcEE
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQ-L-------------------PPNMI------AGETL 142 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~-~-------------------~~~~~------~~~~L 142 (471)
..+.+...|..+.+.+|++++|.|. .+.+.+.+.|+|++... . ..+.. ...+|
T Consensus 23 ~~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL 102 (279)
T 2wbj_D 23 GGAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTL 102 (279)
T ss_dssp CCCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEE
T ss_pred ccceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEE
Confidence 4577888888999999999999999 67788899999973111 0 11111 22489
Q ss_pred EEcCCCCCCCeEEEEEEEecCC----c-eeeeeEEEEEee----ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-C
Q psy17058 143 IINGITKADEGVYICSIQNAQG----N-VFQDYASIQVDK----REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-P 212 (471)
Q Consensus 143 ~i~~v~~~D~G~Y~C~~~~~~~----~-~~~~~~~l~v~~----~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~ 212 (471)
.|.+++.+|+|.|+|.+.+..+ . .......+.|.. ..+|.+.+..+....+.+|+.++|.|.+....|. +
T Consensus 103 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~ 182 (279)
T 2wbj_D 103 TVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 182 (279)
T ss_dssp EESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCE
T ss_pred EEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCc
Confidence 9999999999999999998421 1 112234566653 1356665544333345579999999999444464 7
Q ss_pred eEEEEeCCCCCCcCCCc-------------eEEeeeceEEEeccCCCC-CeEEEEEEEcCCCc
Q psy17058 213 TQTWIRPDNDGKFGPDV-------------EVYQELGVLRFNNIATGD-EGKYTCIAENSAGK 261 (471)
Q Consensus 213 ~v~W~~~~~~~~~~~~~-------------~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~ 261 (471)
.++|++++..+...... ..+...+.|.|......| .|.|+|.+.|....
T Consensus 183 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 183 ELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp EEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred EEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 99999998764332110 011113347777777654 77899999987543
No 339
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.68 E-value=2.1e-16 Score=139.23 Aligned_cols=167 Identities=14% Similarity=0.247 Sum_probs=110.0
Q ss_pred CCceeecCCCcEEEEee-CCCCC----CeEEEEeCC-CCCC------------------CCCcc-------cCcEEEEcC
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDPS----ATIKWSKDN-QEQL------------------PPNMI-------AGETLIING 146 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p~----~~v~W~~~~-~~~~------------------~~~~~-------~~~~L~i~~ 146 (471)
|..+.+.+|++++|.|. .+.+. +.+.|+|+. +... ..+.. ....|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 56788999999999999 66554 789999863 1111 11111 126899999
Q ss_pred CCCCCCeEEEEEEEecCC------c--eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEE
Q psy17058 147 ITKADEGVYICSIQNAQG------N--VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQT 215 (471)
Q Consensus 147 v~~~D~G~Y~C~~~~~~~------~--~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~ 215 (471)
++.+|+|.|.|.+.+..+ . .......|.|.. ..+|.+...++.. .+.+|+.++|.|.+....|.+ .++
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~-~~~~g~~~~l~C~~~g~~P~p~~v~ 165 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVC-GDTTGSSVTLGCLVKGYFPEPVTLT 165 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC------CCSEEEEEEEEEEEBSSCCEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccc-cccCCCCEEEEEEEccEeCCCEEEE
Confidence 999999999999998654 1 112235666652 1345555444322 356899999999995445776 999
Q ss_pred EEeCCCCCCcCCCc-----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEE
Q psy17058 216 WIRPDNDGKFGPDV-----EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNA 266 (471)
Q Consensus 216 W~~~~~~~~~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 266 (471)
|++++..+...... ......+.|.|..+..+| |.|+|.+.|..+......
T Consensus 166 W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~ 220 (228)
T 3bae_H 166 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDK 220 (228)
T ss_dssp EGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred EeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEE
Confidence 99988753211111 111224568899888866 999999999877655433
No 340
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.68 E-value=1.5e-15 Score=133.05 Aligned_cols=162 Identities=14% Similarity=0.221 Sum_probs=108.8
Q ss_pred cCCceeecCCCcEEEEee-CCC--CCCeEEEEeCCCCCC----------------------CCCcc-------cCcEEEE
Q psy17058 97 TPRQQSAPEGSQVTIECK-SND--PSATIKWSKDNQEQL----------------------PPNMI-------AGETLII 144 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~--p~~~v~W~~~~~~~~----------------------~~~~~-------~~~~L~i 144 (471)
.|..+.+.+|++|+|.|. .+. +...+.|+|...... ..+.. ...+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (221)
T 3m8o_H 6 ESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQM 85 (221)
T ss_dssp EESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEE
Confidence 355678999999999999 543 357899998522110 01111 1236999
Q ss_pred cCCCCCCCeEEEEEEEecCC-ceeeeeEEEEEe--eccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC--CeEEEEeC
Q psy17058 145 NGITKADEGVYICSIQNAQG-NVFQDYASIQVD--KREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS--PTQTWIRP 219 (471)
Q Consensus 145 ~~v~~~D~G~Y~C~~~~~~~-~~~~~~~~l~v~--~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~--~~v~W~~~ 219 (471)
.+++.+|+|.|.|.+.+... ........+.|. ...+|.+....... . .+|+.++|.|.+....|. +.+.|+++
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~-~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~ 163 (221)
T 3m8o_H 86 NSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCS-T-QPDGNVVIACLVQGFFPQEPLSVTWSES 163 (221)
T ss_dssp CSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCS-C-CCTTEEEEEEEEEEEBSSCSEEEEESCC
T ss_pred CCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCcc-c-ccCCCEEEEEEEEeeECCCCEEEEEEEC
Confidence 99999999999999988641 213344566664 22345554222222 2 689999999999544675 49999999
Q ss_pred CCCCCcC--------CCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 220 DNDGKFG--------PDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 220 ~~~~~~~--------~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
+..+... .... +...+.|.|......|.|.|+|.+.|..+.
T Consensus 164 g~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~ 212 (221)
T 3m8o_H 164 GQGVTARNFPPSQDASGDL-YTTSSQLTLPATQCLAGKSVTCHVKHYTNP 212 (221)
T ss_dssp STTCEEEECCCEECSSSSC-EEEEEEEEEEGGGSCTTCEEEEEEEETTSC
T ss_pred CEECceEEcCceeeCCCCc-EEEEEEEEECHHHcCCCCeEEEEEEECCCC
Confidence 8775211 1111 112346899999999999999999998654
No 341
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.68 E-value=1.3e-16 Score=139.18 Aligned_cols=171 Identities=14% Similarity=0.212 Sum_probs=105.0
Q ss_pred EcCCceeecCCCcEEEEee-CC--CCCCeEEEEeCCCCCC-------------------CCCcc-----cCcEEEEcCCC
Q psy17058 96 VTPRQQSAPEGSQVTIECK-SN--DPSATIKWSKDNQEQL-------------------PPNMI-----AGETLIINGIT 148 (471)
Q Consensus 96 ~~p~~~~v~~G~~v~l~C~-~~--~p~~~v~W~~~~~~~~-------------------~~~~~-----~~~~L~i~~v~ 148 (471)
..|..+.+.+|++++|.|. .+ .+...+.|+|...... ..+.. ....|.|.+++
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (215)
T 3nl4_H 4 EESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPT 83 (215)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCC
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCC
Confidence 3466788999999999999 43 3467899998522111 01110 23369999999
Q ss_pred CCCCeEEEEEEEecCCc---eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeEEEEeCCCC
Q psy17058 149 KADEGVYICSIQNAQGN---VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQTWIRPDND 222 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~~---~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~~~~~ 222 (471)
.+|+|.|.|.+.+..+. .......+.|.. ..+|.+...++.. .+.+|+.++|.|.+....| ...+.|++++..
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~-~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~ 162 (215)
T 3nl4_H 84 TEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCC-GDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLT 162 (215)
T ss_dssp GGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCT-TCCC--CEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred cccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCc-cccCCCcEEEEEEEeeeeCCCeEEEEeeCCEE
Confidence 99999999999886541 122334555541 2445555333332 4567999999999954444 457889998875
Q ss_pred CCcCCCceEEeeeceEEE---eccCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 223 GKFGPDVEVYQELGVLRF---NNIATGDEGKYTCIAENSAGKEVMNAYI 268 (471)
Q Consensus 223 ~~~~~~~~~~~~~~~l~i---~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 268 (471)
+...........++.+.+ ..+...| |.|+|.+.|..+.......|
T Consensus 163 ~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l 210 (215)
T 3nl4_H 163 NGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTV 210 (215)
T ss_dssp TTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEEC
T ss_pred CCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEec
Confidence 433222222222334444 4466667 99999999987766555444
No 342
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.68 E-value=4.6e-16 Score=135.69 Aligned_cols=174 Identities=17% Similarity=0.252 Sum_probs=127.0
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC--CceEEe--eeceEEEeccCCCCCeEEEEEEEcCCCceEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP--DVEVYQ--ELGVLRFNNIATGDEGKYTCIAENSAGKEVM 264 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 264 (471)
....+.+|+.++|.|.+ .+.|.+.+.|+|++..+.... ++.+.. ..+.|.|.++...|.|.|+|.+.|..|....
T Consensus 26 ~~~~~~~G~~v~l~C~~-~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 104 (215)
T 3mtr_A 26 VAVYTWEGNQVNITCEV-FAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESL 104 (215)
T ss_dssp SEEEECTTCCEEEEEEE-EEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEE
T ss_pred ceEEEECCCCEEEEEEE-eecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEE
Confidence 34678899999999999 788889999999998765543 333332 2567999999999999999999999999888
Q ss_pred EEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEe----ecCCC--eEEEEeCCccCCCccc--ccccCceeEEEEeecC
Q psy17058 265 NAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEAT----GRPMP--TVSWVKYIAPFDRNLE--RDELTSRAVYTIASVR 336 (471)
Q Consensus 265 ~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~----g~p~~--~i~W~~~~~~~~~~~~--~~~~~~~~~l~i~~~~ 336 (471)
.+.|.|..+|...... .....+..+.|.|... +.|.. .+.|.+++........ .........|.|.++.
T Consensus 105 ~~~l~v~~~P~~p~~~---~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~ 181 (215)
T 3mtr_A 105 EFILVQADTPSSPSID---QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLK 181 (215)
T ss_dssp EEEEEECCCCCCCEEE---EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCC
T ss_pred EEEEEECCCCCCCcce---EEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCC
Confidence 8888888766543221 1223467789999742 22333 4789887765322111 0111223789999999
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 337 ESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 337 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
..+.|.|+|.|.|..|....+..+.+..+|
T Consensus 182 ~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 182 PETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp TTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred CCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 999999999999999988766666666543
No 343
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.68 E-value=1.3e-15 Score=134.49 Aligned_cols=172 Identities=14% Similarity=0.233 Sum_probs=108.6
Q ss_pred CCceeecCCCcEEEEee-CCCC--CCeEEEEeCCC-CCC------------------CCCcc-------cCcEEEEcCCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQ-EQL------------------PPNMI-------AGETLIINGIT 148 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~-~~~------------------~~~~~-------~~~~L~i~~v~ 148 (471)
|..+.+.+|++++|.|. .+.+ ...+.|||... ... ..+.. ....|+|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 55678999999999999 5443 57899999631 111 11111 12389999999
Q ss_pred CCCCeEEEEEEEecCC--c---eeeeeEEEEEee--ccCCeeeecCCCceeEEcC-CeEEEEEEccCCCCCC-eEEEEe-
Q psy17058 149 KADEGVYICSIQNAQG--N---VFQDYASIQVDK--REMPRIRIHPNASQTFIVG-DRADIQCVLEAGEPSP-TQTWIR- 218 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~--~---~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g-~~~~L~C~~~~~~p~~-~v~W~~- 218 (471)
.+|+|.|.|.+.+..+ . .......|.|.. ..+|.+....+.. .+..| +.++|.|.+....|.+ .++|++
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~-~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~ 165 (232)
T 1dn0_B 87 AADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCE-NSPSDTSSVAVGCLAQDFLPDSITFSWKYK 165 (232)
T ss_dssp GGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC-------CCSEEEEEEEEEEBSSCCEEEEEET
T ss_pred cccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEecccc-ccCCCCCcEEEEEEEEEEeCCCeEEEEEcC
Confidence 9999999999984221 1 122345666653 2335554332222 34578 9999999995555775 999999
Q ss_pred CCCCCCcC---CC---ceEEeeeceEEEeccCC--CCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 219 PDNDGKFG---PD---VEVYQELGVLRFNNIAT--GDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 219 ~~~~~~~~---~~---~~~~~~~~~l~i~~~~~--~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
++..+... .. ...+...+.|.|..... +|.|.|+|.+.|..+.......+.+
T Consensus 166 ~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~ 225 (232)
T 1dn0_B 166 NNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPV 225 (232)
T ss_dssp TSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC
T ss_pred CCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCC
Confidence 77653220 00 01122245688888886 7899999999999887655555443
No 344
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.67 E-value=1.2e-16 Score=144.72 Aligned_cols=171 Identities=15% Similarity=0.215 Sum_probs=113.5
Q ss_pred CCcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCCCCCC--------------C-----Cc------ccCcEEEEc
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQEQLP--------------P-----NM------IAGETLIIN 145 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~~~--------------~-----~~------~~~~~L~i~ 145 (471)
...+...|..+.+.+|++++|.|....+.+.+.|+|....... . +. ....+|.|.
T Consensus 27 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 106 (270)
T 3qib_D 27 GMKVIQTPRYLVKGQGQKAKMRCIPEKGHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQ 106 (270)
T ss_dssp -CCCEEECSEEEEETTSCEEEEEECCTTCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEES
T ss_pred ceeEEeCCCeEEEcCCCCEEEEEEecCCCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEEC
Confidence 4566777888999999999999994447789999994211100 0 00 135689999
Q ss_pred CCCCCCCeEEEEEEEecCC---ceeeeeEEEEEee----ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEE
Q psy17058 146 GITKADEGVYICSIQNAQG---NVFQDYASIQVDK----REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWI 217 (471)
Q Consensus 146 ~v~~~D~G~Y~C~~~~~~~---~~~~~~~~l~v~~----~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~ 217 (471)
+++.+|+|.|.|.+.+... ........+.|.. ..+|.+.+.......+..|+.++|.|.+....|.+ .++|+
T Consensus 107 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~ 186 (270)
T 3qib_D 107 SSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 186 (270)
T ss_dssp SCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEE
Confidence 9999999999999986421 1123334555542 12455555444443455699999999994446666 89999
Q ss_pred eCCCCCCcCCC-------------ceEEeeeceEEEeccCCCC-CeEEEEEEEcCCCc
Q psy17058 218 RPDNDGKFGPD-------------VEVYQELGVLRFNNIATGD-EGKYTCIAENSAGK 261 (471)
Q Consensus 218 ~~~~~~~~~~~-------------~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~~~ 261 (471)
++|..+..... -..+...+.|.|.....+| .|.|+|.+.|....
T Consensus 187 k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 187 VNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp ETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBC
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCC
Confidence 99876433211 0111113457888887777 99999999987543
No 345
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.67 E-value=3.9e-16 Score=130.62 Aligned_cols=147 Identities=17% Similarity=0.168 Sum_probs=100.7
Q ss_pred ceeecCCCcEEEEeeCCCCCCeEEEEeCCCCC-------------CCCCcc---cCcEEEEcCCCCCCCeEEEEEEEecC
Q psy17058 100 QQSAPEGSQVTIECKSNDPSATIKWSKDNQEQ-------------LPPNMI---AGETLIINGITKADEGVYICSIQNAQ 163 (471)
Q Consensus 100 ~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~-------------~~~~~~---~~~~L~i~~v~~~D~G~Y~C~~~~~~ 163 (471)
.+.+.+|++|+|.|....|.+.+.|++++... ...+.. .+++|+|.+++.+|+|.|+|.+.+..
T Consensus 4 ~v~~~~G~~VtL~c~~~~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~ 83 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNIT 83 (171)
T ss_dssp EEEEETTCCEEECCCCSSCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCC
T ss_pred EEEEEcCCCEEEcCCCCCCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCC
Confidence 56789999999999944488899999984311 111111 45789999999999999999998766
Q ss_pred CceeeeeEEEEEeec-cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEec
Q psy17058 164 GNVFQDYASIQVDKR-EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNN 242 (471)
Q Consensus 164 ~~~~~~~~~l~v~~~-~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~ 242 (471)
+ .....|.|... ..|.+.... ...+|.|.+ .+.|.+.++|++++..+.... ...|.+.
T Consensus 84 ~---~~~~~L~V~~~~~~p~i~~~~---------~~~~L~C~~-~~~p~p~i~W~~~~~~l~~~~-------~~~l~~~- 142 (171)
T 1ccz_A 84 D---TMKFFLYVLEMVSKPMIYWEC---------SNATLTCEV-LEGTDVELKLYQGKEHLRSLR-------QKTMSYQ- 142 (171)
T ss_dssp S---CEEEEEEEECCCCCCEEEEET---------TTTEEEEEC-SSCSSCEEEEEETTEEEEEES-------SSEEEEE-
T ss_pred C---cEEEEEEEECcCCCCEEEEec---------CCcEEEEEe-CCCCCcEEEEEECCEECcCCc-------ceEEEEe-
Confidence 5 33455555432 123332221 113799999 666889999999887643221 1223333
Q ss_pred cCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 243 IATGDEGKYTCIAENSAGKEVMNAYI 268 (471)
Q Consensus 243 ~~~~d~G~Y~C~~~~~~~~~~~~~~l 268 (471)
...|.|.|+|.|.|..+..+..+.|
T Consensus 143 -~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 143 -WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp -CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred -ccCCCceEEEEEEcccCcccceeEE
Confidence 3678999999999998887665544
No 346
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.67 E-value=3.4e-16 Score=139.52 Aligned_cols=165 Identities=16% Similarity=0.161 Sum_probs=112.1
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCC--------------C---CcC-CCceEEee---eceEEEeccCCCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDND--------------G---KFG-PDVEVYQE---LGVLRFNNIATGD 247 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~--------------~---~~~-~~~~~~~~---~~~l~i~~~~~~d 247 (471)
....+.+|+.++|.|. .+.+...+.|+|.... . ... .++.+... ...|.|.+++.+|
T Consensus 10 ~~v~v~~G~~v~L~C~--~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D 87 (245)
T 4ei6_B 10 SHQIIDMGQMVTLNCD--PVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALED 87 (245)
T ss_dssp SEEEEETTCCEEEEEE--CCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGG
T ss_pred ceEEecCCCCEEEEEE--cCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhH
Confidence 3457889999999994 4678889999982111 0 011 34444331 3379999999999
Q ss_pred CeEEEEEEEcCC----CceEEEEEEEEE------eCCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccC
Q psy17058 248 EGKYTCIAENSA----GKEVMNAYIHVL------TLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPF 315 (471)
Q Consensus 248 ~G~Y~C~~~~~~----~~~~~~~~l~V~------~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~ 315 (471)
+|.|.|.+.+.. ........|.|. .+|.+.+.......+.+|+.+.|.|.+.| .|.+ .+.|+++|..+
T Consensus 88 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l 167 (245)
T 4ei6_B 88 SAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 167 (245)
T ss_dssp CEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred CEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEEC
Confidence 999999998532 223344567776 35555544333334566999999999998 5545 89999999887
Q ss_pred CCcccc-------------cccCceeEEEEeecCCCC-CeEEEEEEEcCCCceE
Q psy17058 316 DRNLER-------------DELTSRAVYTIASVRESD-AGQYKCIGKNSAGTEE 355 (471)
Q Consensus 316 ~~~~~~-------------~~~~~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~ 355 (471)
...... ......+.|.|.....+| .|.|+|.|.|......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~~ 221 (245)
T 4ei6_B 168 HSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp CTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred CCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCCCc
Confidence 643211 111223458888888888 9999999999765443
No 347
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.67 E-value=6.7e-16 Score=137.17 Aligned_cols=164 Identities=15% Similarity=0.196 Sum_probs=111.4
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCC-----------------CcCCCceEEe---eeceEEEeccCCCCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDG-----------------KFGPDVEVYQ---ELGVLRFNNIATGDE 248 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~-----------------~~~~~~~~~~---~~~~l~i~~~~~~d~ 248 (471)
....+.+|+.++|.|.+ .+ +.+.+.|+|..... ....++.+.. ....|.|.+++.+|+
T Consensus 10 ~~v~v~~G~~v~L~C~~-~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 87 (240)
T 3q5y_A 10 RHIIKEKGGRSVLTCIP-IS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDS 87 (240)
T ss_dssp SEEEEETTCCEEEEEEC-CT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGC
T ss_pred ceeeecCCCcEEEEEEe-CC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHC
Confidence 34578899999999998 33 77899999832210 0112333332 134699999999999
Q ss_pred eEEEEEEEcCC---CceEEEEEEEEE------eCCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccCCC
Q psy17058 249 GKYTCIAENSA---GKEVMNAYIHVL------TLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPFDR 317 (471)
Q Consensus 249 G~Y~C~~~~~~---~~~~~~~~l~V~------~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~~~ 317 (471)
|.|.|.+.+.. ........|.|. .+|.+.+.......+.+|+.+.|.|.+.| .|.+ .+.|+++|..+..
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~ 167 (240)
T 3q5y_A 88 AMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHS 167 (240)
T ss_dssp EEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred EEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcC
Confidence 99999998321 122334566666 34555544333334556899999999998 6656 7999999988754
Q ss_pred ccccc---------ccCceeEEEEeecCCCC-CeEEEEEEEcCCCce
Q psy17058 318 NLERD---------ELTSRAVYTIASVRESD-AGQYKCIGKNSAGTE 354 (471)
Q Consensus 318 ~~~~~---------~~~~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~ 354 (471)
..... .....+.|.|.....+| .|.|+|.|.|.....
T Consensus 168 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~~ 214 (240)
T 3q5y_A 168 GVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLSE 214 (240)
T ss_dssp TEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBCT
T ss_pred cEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 32211 11223458899988888 779999999976544
No 348
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.67 E-value=2.5e-16 Score=141.12 Aligned_cols=172 Identities=14% Similarity=0.222 Sum_probs=111.6
Q ss_pred CCceeecCCCcEEEEee-CC--CCCCeEEEEeCCCCC--------------------CCCCcc-------cCcEEEEcCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SN--DPSATIKWSKDNQEQ--------------------LPPNMI-------AGETLIINGI 147 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~--~p~~~v~W~~~~~~~--------------------~~~~~~-------~~~~L~i~~v 147 (471)
|..+.+.+|++++|.|. .+ .+...+.|+|..... ...+.. ...+|+|.++
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 56788999999999999 44 335689999852111 001111 2235999999
Q ss_pred CCCCCeEEEEEEEecC---CceeeeeEEEEEe--eccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCC
Q psy17058 148 TKADEGVYICSIQNAQ---GNVFQDYASIQVD--KREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDN 221 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~---~~~~~~~~~l~v~--~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~ 221 (471)
+.+|+|.|.|.+.+.. .........+.|. ...+|.+...... ..+..|+.++|.|.+....|.+ .+.|++++.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 165 (253)
T 3liz_H 87 KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (253)
T ss_dssp CGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC-------CCEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred ChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCC-cccCCCCcEEEEEEEeeEeCCCeEEEEEeCCe
Confidence 9999999999998752 1112334456664 2245555543332 2456799999999995546765 999999887
Q ss_pred CCCcCCCc-----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEE
Q psy17058 222 DGKFGPDV-----EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVL 271 (471)
Q Consensus 222 ~~~~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 271 (471)
.+...... ..+...+.|.|.....+| |.|+|.+.|..+.......+.+.
T Consensus 166 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 166 SSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred ecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 42111000 122224679999999999 99999999988776666655543
No 349
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.67 E-value=8.2e-16 Score=139.85 Aligned_cols=175 Identities=18% Similarity=0.288 Sum_probs=113.5
Q ss_pred CceeEEcCCeEEEEEEccCCC--CCCeEEEEeCCCCCC-------------------cCCCceEEee----eceEEEecc
Q psy17058 189 ASQTFIVGDRADIQCVLEAGE--PSPTQTWIRPDNDGK-------------------FGPDVEVYQE----LGVLRFNNI 243 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~--p~~~v~W~~~~~~~~-------------------~~~~~~~~~~----~~~l~i~~~ 243 (471)
....+.+|++++|.|.+ .+. +...+.|+|...... ...++.+..+ ...|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 8 GAEVKKPGSSVKVSCTS-SEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCEECTTCCEEEEEEE-CCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCEEECCCCcEEEEEEe-eccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 45578899999999998 443 567899998532111 1123433321 137999999
Q ss_pred CCCCCeEEEEEEEcC---------CCceEEEEEEEEEe---------------CCceeeCCCccEEecCCCcEEEEEEEe
Q psy17058 244 ATGDEGKYTCIAENS---------AGKEVMNAYIHVLT---------------LPAVTITPSEYVSVRPGEPLTLECEAT 299 (471)
Q Consensus 244 ~~~d~G~Y~C~~~~~---------~~~~~~~~~l~V~~---------------~p~~~~~~~~~~~~~~g~~v~l~C~~~ 299 (471)
+.+|+|.|.|.+.+. .........|.|.. ++.+...+ . ..+.+|++++|.|.+.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p-~-~~v~~G~~v~L~C~~~ 164 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPP-S-VSKGLRQTATLTCTGN 164 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCS-E-EEECTTCCEEEEEECC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCC-c-EEEecCCCEEEEEEec
Confidence 999999999999886 11122344566655 33333332 2 7889999999999998
Q ss_pred e-cC-CCeEEEEeCC--ccCC--------------CcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCc---eEEEE
Q psy17058 300 G-RP-MPTVSWVKYI--APFD--------------RNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGT---EEKVI 358 (471)
Q Consensus 300 g-~p-~~~i~W~~~~--~~~~--------------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~---~~~~~ 358 (471)
+ .+ .+.+.|++.. ..+. ............+|+|.+++.+|+|.|+|.+.|..+. .....
T Consensus 165 ~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~~t 244 (280)
T 3fku_X 165 SNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGGGT 244 (280)
T ss_dssp CCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBCCC
T ss_pred CCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECCCE
Confidence 7 44 3689999842 2211 0001111234457999999999999999999997632 22335
Q ss_pred EEEEecCC
Q psy17058 359 TVAVEHRP 366 (471)
Q Consensus 359 ~l~V~~~p 366 (471)
.|.|...+
T Consensus 245 ~l~V~~~~ 252 (280)
T 3fku_X 245 KLTVLGQP 252 (280)
T ss_dssp EEEEC---
T ss_pred EEEECCCC
Confidence 67776554
No 350
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.66 E-value=9.4e-16 Score=138.63 Aligned_cols=161 Identities=19% Similarity=0.285 Sum_probs=105.5
Q ss_pred CceeEEcCCeEEEEEEccCCCC-----CCeEEEEeCCCC--CC------------cCCCceEEee--eceEEEeccCCCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEP-----SPTQTWIRPDND--GK------------FGPDVEVYQE--LGVLRFNNIATGD 247 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p-----~~~v~W~~~~~~--~~------------~~~~~~~~~~--~~~l~i~~~~~~d 247 (471)
....+.+|++++|.|.+ .+.+ .+.+.|+|.... .. ...++.+... ...|.|.+++.+|
T Consensus 23 ~~~~v~~G~~v~L~C~~-~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 101 (268)
T 1x9q_A 23 LSLPVSLGDQASISCRS-SQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAED 101 (268)
T ss_dssp SEECCCTTCCEEEEEEE-SSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CeEEecCCCCEEEEeEe-cCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhH
Confidence 34567899999999998 5555 478999986422 10 1234444321 3479999999999
Q ss_pred CeEEEEEEEcCCCc-eEEEEEEEEEeCCc----------------------eeeCCCccEEecCCCcEEEEEEEeecCC-
Q psy17058 248 EGKYTCIAENSAGK-EVMNAYIHVLTLPA----------------------VTITPSEYVSVRPGEPLTLECEATGRPM- 303 (471)
Q Consensus 248 ~G~Y~C~~~~~~~~-~~~~~~l~V~~~p~----------------------~~~~~~~~~~~~~g~~v~l~C~~~g~p~- 303 (471)
+|.|.|.+.+..+. ......|.|...+. +.+.......+.+|++++|.|.+.+.+.
T Consensus 102 sG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 181 (268)
T 1x9q_A 102 LGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFG 181 (268)
T ss_dssp CEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCGG
T ss_pred CEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCcccc
Confidence 99999999887442 22234566654321 1122223457899999999999998764
Q ss_pred -CeEEEEeCC--ccCC---------------------Cccccc--ccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 304 -PTVSWVKYI--APFD---------------------RNLERD--ELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 304 -~~i~W~~~~--~~~~---------------------~~~~~~--~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
+.+.|+++. ..+. ...... ......+|.|.+++.+|+|.|+|.|.|.
T Consensus 182 ~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 182 HYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp GCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred ccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 689999863 2110 000000 0113468999999999999999999984
No 351
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.66 E-value=6.5e-16 Score=140.57 Aligned_cols=166 Identities=16% Similarity=0.189 Sum_probs=111.8
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC-------------------cCCCceEEe---eeceEEEeccCCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK-------------------FGPDVEVYQ---ELGVLRFNNIATG 246 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~-------------------~~~~~~~~~---~~~~l~i~~~~~~ 246 (471)
....+.+|++++|.|.+ .+.+.+.+.|+|++.... ...++.+.. ....|.|.+++.+
T Consensus 32 ~~v~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 110 (279)
T 2wbj_D 32 SWVISKSGTSVKIECRS-LDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPE 110 (279)
T ss_dssp SEEEEETTSCEEEEEEE-SSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGG
T ss_pred CeEEecCCCeEEEEEEe-CCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCcc
Confidence 45678899999999999 567778999998642100 123444432 1347999999999
Q ss_pred CCeEEEEEEEcCCC----c--eEEEEEEEEEe------CCceeeCCCccEEecCCCcEEEEEEEeec-CC-CeEEEEeCC
Q psy17058 247 DEGKYTCIAENSAG----K--EVMNAYIHVLT------LPAVTITPSEYVSVRPGEPLTLECEATGR-PM-PTVSWVKYI 312 (471)
Q Consensus 247 d~G~Y~C~~~~~~~----~--~~~~~~l~V~~------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~i~W~~~~ 312 (471)
|+|.|+|.+.+..+ . ......|.|.. +|.+.+.......+.+|+.+.|.|.+.|. |. +.+.|++++
T Consensus 111 D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g 190 (279)
T 2wbj_D 111 DSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 190 (279)
T ss_dssp GCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETT
T ss_pred CCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEECC
Confidence 99999999998421 1 12234677764 45454432222234478999999999986 54 699999999
Q ss_pred ccCCCcccc-------------cccCceeEEEEeecCCCC-CeEEEEEEEcCCCceE
Q psy17058 313 APFDRNLER-------------DELTSRAVYTIASVRESD-AGQYKCIGKNSAGTEE 355 (471)
Q Consensus 313 ~~~~~~~~~-------------~~~~~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~ 355 (471)
..+...... ......+.|.|......| .|.|+|.|.|......
T Consensus 191 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~~ 247 (279)
T 2wbj_D 191 KEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 247 (279)
T ss_dssp EECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCTT
T ss_pred EECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCCC
Confidence 887543211 011123457777777654 7789999999876554
No 352
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.66 E-value=7.3e-17 Score=142.93 Aligned_cols=173 Identities=10% Similarity=0.123 Sum_probs=111.2
Q ss_pred CeeeecCCCcee-EEcCCeEEEEEEccCCC--CCC-eEEEEeCCCCCCcCC-------CceEEeeeceEEEeccCCCCCe
Q psy17058 181 PRIRIHPNASQT-FIVGDRADIQCVLEAGE--PSP-TQTWIRPDNDGKFGP-------DVEVYQELGVLRFNNIATGDEG 249 (471)
Q Consensus 181 p~~~~~~~~~~~-v~~g~~~~L~C~~~~~~--p~~-~v~W~~~~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d~G 249 (471)
|.+.+.++.... +.+|+.++|.|.+.... |.+ .++|+|++..+.... ....+...+.|.|.+++.+|+|
T Consensus 16 P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g 95 (239)
T 1i1c_A 16 SSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGK 95 (239)
T ss_dssp -CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCC
Confidence 444444443333 66899999999994332 665 999999986532110 0001122457999999999999
Q ss_pred EEEEEEEcCCCceEE--EEEE--EEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCC-CeEEEEeCCccCCCccccc-
Q psy17058 250 KYTCIAENSAGKEVM--NAYI--HVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPM-PTVSWVKYIAPFDRNLERD- 322 (471)
Q Consensus 250 ~Y~C~~~~~~~~~~~--~~~l--~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~-~~i~W~~~~~~~~~~~~~~- 322 (471)
.|+|.+.|..+.... .+.+ .+..+|.+.+.+.... ...|+.+.|.|.+.| +|. +.+.|+++|..+.......
T Consensus 96 ~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 174 (239)
T 1i1c_A 96 TFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKE-EMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPP 174 (239)
T ss_dssp CEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCC
T ss_pred eEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChH-HhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCc
Confidence 999999998775322 2222 3445676665543321 234788999999998 555 3899999998875321100
Q ss_pred --c----cCceeEEEEeecCCCCCeEEEEEEEcCCCce
Q psy17058 323 --E----LTSRAVYTIASVRESDAGQYKCIGKNSAGTE 354 (471)
Q Consensus 323 --~----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 354 (471)
. ....+.|.|.....+|.|.|+|.|.|.....
T Consensus 175 ~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~~ 212 (239)
T 1i1c_A 175 TMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLEN 212 (239)
T ss_dssp EECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGG
T ss_pred eECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCCC
Confidence 1 1122345555555567999999999987654
No 353
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.66 E-value=8.3e-17 Score=142.20 Aligned_cols=194 Identities=15% Similarity=0.186 Sum_probs=109.9
Q ss_pred eEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCcee-EEcCCeEEEEEEccCCC--C-CCeEEEEeCCCCCCcCCC
Q psy17058 153 GVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQT-FIVGDRADIQCVLEAGE--P-SPTQTWIRPDNDGKFGPD 228 (471)
Q Consensus 153 G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~-v~~g~~~~L~C~~~~~~--p-~~~v~W~~~~~~~~~~~~ 228 (471)
|.|.|...+..+. ......+ .+|.+.+.++.... +..|+.++|.|.+.... | ...++|+++|..+.....
T Consensus 1 ~~~~~~~~~~~~~---c~~~~~~---~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~ 74 (240)
T 4acp_A 1 GTKSCDKTHTCPP---CPAPELL---GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKT 74 (240)
T ss_dssp ----------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEE
T ss_pred CceeeeeeecCCC---CCccccC---CCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCcee
Confidence 7899998886442 1111111 24666666555444 55699999999995544 4 458999999876432110
Q ss_pred --c-----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCce--EEEEEE--EEEeCCceeeCCCccEEecCCCcEEEEEE
Q psy17058 229 --V-----EVYQELGVLRFNNIATGDEGKYTCIAENSAGKE--VMNAYI--HVLTLPAVTITPSEYVSVRPGEPLTLECE 297 (471)
Q Consensus 229 --~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l--~V~~~p~~~~~~~~~~~~~~g~~v~l~C~ 297 (471)
. ..+...+.|.|.....+|.|.|+|++.|..+.. ...+.+ .+..+|.+.+.+.... ...|+.+.|.|.
T Consensus 75 ~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~-~~~g~~~~L~C~ 153 (240)
T 4acp_A 75 KPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRD-ELTKNQVSLTCL 153 (240)
T ss_dssp CCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGG-GGGSSEEEEEEE
T ss_pred ccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChH-HhcCCceEEEEE
Confidence 0 011113467777777778999999999987643 333322 2345677766554322 234899999999
Q ss_pred Eee-cCCC-eEEEEeCCccCCCccc-------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCc
Q psy17058 298 ATG-RPMP-TVSWVKYIAPFDRNLE-------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGT 353 (471)
Q Consensus 298 ~~g-~p~~-~i~W~~~~~~~~~~~~-------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 353 (471)
+.| +|.+ .+.|++++..+..... .......+.|.|.....++.|.|+|.|.|..-.
T Consensus 154 ~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l~ 218 (240)
T 4acp_A 154 VKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 218 (240)
T ss_dssp EEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCCC
Confidence 999 5654 8999999988653211 011223456677776667889999999998643
No 354
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.66 E-value=1e-15 Score=154.51 Aligned_cols=163 Identities=21% Similarity=0.313 Sum_probs=118.0
Q ss_pred ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc------------CCCceEEeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF------------GPDVEVYQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~------------~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
...+.+|++++|.|.+..+.|.+.++|+|++..+.. ..+..+.. ++.|.|.+++.+|+|.|+|.+.|
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLP-NGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECT-TSCEEESSCCGGGCEEEEEEEEC
T ss_pred ccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcC-CceEEEeccccccCeEEEEEEEc
Confidence 346789999999999856788889999998763211 22333333 56899999999999999999999
Q ss_pred CCCce-EEEEEEEEEeCCcee-eCCCccEEecCCCc-EEEEEEEee-cCCCeEEEEeCCccCCCcccc------------
Q psy17058 258 SAGKE-VMNAYIHVLTLPAVT-ITPSEYVSVRPGEP-LTLECEATG-RPMPTVSWVKYIAPFDRNLER------------ 321 (471)
Q Consensus 258 ~~~~~-~~~~~l~V~~~p~~~-~~~~~~~~~~~g~~-v~l~C~~~g-~p~~~i~W~~~~~~~~~~~~~------------ 321 (471)
..+.. ...+.|.|..+|... +.+... .+.+|+. +.|.|.+.+ +|.+.++|++++..+......
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~p~i~~~~~-~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~ 532 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGKPEIVDSAS-ELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPE 532 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCCCEEESCCS-EECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTT
T ss_pred CCCceeEEEEEEEEEcCCCCCEEEcCCc-ccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCC
Confidence 88876 778889998755422 222222 3555555 466999998 699999999999887532110
Q ss_pred -cccCceeEEEEeecC-CCCCeEEEEEEEcCCCce
Q psy17058 322 -DELTSRAVYTIASVR-ESDAGQYKCIGKNSAGTE 354 (471)
Q Consensus 322 -~~~~~~~~l~i~~~~-~~d~G~Y~C~a~n~~g~~ 354 (471)
......++|.|..++ .++.|.|+|.|+|..+..
T Consensus 533 ~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 533 TGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp TCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred CceEEEEEEEEEEeccccCCCceEEEEEeccCCCC
Confidence 111234679999988 555889999999996543
No 355
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.66 E-value=2e-15 Score=135.62 Aligned_cols=164 Identities=17% Similarity=0.276 Sum_probs=109.3
Q ss_pred EcCCceeecCCCcEEEEee-CCCC--CCeEEEEeCCC-CCC-------------------CCCcc-------cCcEEEEc
Q psy17058 96 VTPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQ-EQL-------------------PPNMI-------AGETLIIN 145 (471)
Q Consensus 96 ~~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~-~~~-------------------~~~~~-------~~~~L~i~ 145 (471)
..|..+.+.+|++|+|.|. .+.+ .+.+.|+|+.. ..+ ..+.. ....|+|.
T Consensus 11 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 90 (261)
T 2xqy_G 11 QQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLS 90 (261)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEc
Confidence 3466788999999999999 5555 57899999732 111 11111 13589999
Q ss_pred CCCCCCCeEEEEEEEecCCc--eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCC
Q psy17058 146 GITKADEGVYICSIQNAQGN--VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPD 220 (471)
Q Consensus 146 ~v~~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~ 220 (471)
+++.+|+|.|.|.+.+..+. .......|.|.. ..+|.+....+.. .+.+|+.++|.|.+....|.+ .+.|++++
T Consensus 91 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~-~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g 169 (261)
T 2xqy_G 91 SLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVC-GDTTGSSVTLGCLVKGYFPEPVTLTWNSGS 169 (261)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCC-C--CCSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred CCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCc-cccCCCcEEEEEEEEeEeCCCCEEEEecCC
Confidence 99999999999999986431 122334566653 2345555443322 456899999999995445765 99999998
Q ss_pred CCCCcCCCc-----eEEeeeceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 221 NDGKFGPDV-----EVYQELGVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 221 ~~~~~~~~~-----~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
..+...... ..+...+.|.|.....+| |.|+|.+.|....
T Consensus 170 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 170 LSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 214 (261)
T ss_dssp CCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred CcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCC
Confidence 764221100 112224578999888878 9999999986544
No 356
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.66 E-value=1.6e-15 Score=132.33 Aligned_cols=167 Identities=17% Similarity=0.245 Sum_probs=107.4
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCC--CCC----------------cCCCceEEee----eceEEEeccCC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDN--DGK----------------FGPDVEVYQE----LGVLRFNNIAT 245 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~--~~~----------------~~~~~~~~~~----~~~l~i~~~~~ 245 (471)
...+.+|++++|.|.+ .+.+ ...+.|+|+.. ... ...++.+..+ ...|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (215)
T 1c5d_H 9 PGLVQPSQTLSLTCTV-SGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQT 87 (215)
T ss_dssp CCEECTTCCEEEEEEE-CSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCG
T ss_pred CeeecCCCcEEEEEEE-CCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCc
Confidence 4467899999999998 4443 47899998642 110 1223333321 23799999999
Q ss_pred CCCeEEEEEEEcCCCc---eEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeCCccCC
Q psy17058 246 GDEGKYTCIAENSAGK---EVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKYIAPFD 316 (471)
Q Consensus 246 ~d~G~Y~C~~~~~~~~---~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~~~~~~ 316 (471)
+|+|.|.|.+.+..+. ....+.|.|.. +|.+...+.. ..+.+|+.+.|.|.+.|. |.+ .+.|++++..+.
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 166 (215)
T 1c5d_H 88 EDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPG-CGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSD 166 (215)
T ss_dssp GGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCC-SSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCS
T ss_pred ccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCC-hhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCc
Confidence 9999999999886421 22335677763 4555443322 235689999999999986 877 999999987643
Q ss_pred Cccccc-ccCceeEE--EEeecCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 317 RNLERD-ELTSRAVY--TIASVRESDAGQYKCIGKNSAGTEEKVIT 359 (471)
Q Consensus 317 ~~~~~~-~~~~~~~l--~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 359 (471)
...... .......+ .+.....+| |.|+|.|.|..|.......
T Consensus 167 ~~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~~~ 211 (215)
T 1c5d_H 167 VHTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVDKK 211 (215)
T ss_dssp CCBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred eEecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEEEe
Confidence 211100 00111111 123444456 9999999999988765443
No 357
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.65 E-value=8.9e-17 Score=142.36 Aligned_cols=170 Identities=12% Similarity=0.149 Sum_probs=109.2
Q ss_pred CCCcEEEcCCcee--ecCCCcEEEEee-CCC---CCC-eEEEEeCCCCCCCCC-----------cccCcEEEEcCCCCCC
Q psy17058 90 QANEVQVTPRQQS--APEGSQVTIECK-SND---PSA-TIKWSKDNQEQLPPN-----------MIAGETLIINGITKAD 151 (471)
Q Consensus 90 ~~~~v~~~p~~~~--v~~G~~v~l~C~-~~~---p~~-~v~W~~~~~~~~~~~-----------~~~~~~L~i~~v~~~D 151 (471)
.+|.+.+.|.... +.+|++++|.|. .+. |.+ .|.|+++++...... ......|.|.+++.+|
T Consensus 14 ~~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D 93 (239)
T 1i1c_A 14 EVSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLN 93 (239)
T ss_dssp ---CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHT
T ss_pred cCCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccC
Confidence 4556656555555 789999999999 444 655 899999954322110 0123479999999999
Q ss_pred CeEEEEEEEecCCceeeeeEEEEE--eeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCcCCC
Q psy17058 152 EGVYICSIQNAQGNVFQDYASIQV--DKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKFGPD 228 (471)
Q Consensus 152 ~G~Y~C~~~~~~~~~~~~~~~l~v--~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~~~~ 228 (471)
+|.|+|.+.+..+. ......+.+ .+..+|.+.+.+.... ...|+.++|.|.+....|. ..++|+|+|..+.....
T Consensus 94 ~g~Y~C~~~~~~~~-~~~~~~v~~~~~~~~~P~v~v~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~ 171 (239)
T 1i1c_A 94 GKTFKCKVNSGAFP-APIEKSISKPEGTPRGPQVYTMAPPKE-EMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKN 171 (239)
T ss_dssp TCCEEEEEECSSSS-SCEEEEECCCSSCCBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEE
T ss_pred CCeEEEEEecccCC-CCcEEEEecCCCCCcCCEEEEECCChH-HhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCcee
Confidence 99999999998765 222223332 3456677766654432 2358899999999544565 58999999876432111
Q ss_pred ceE-Eeee------ceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 229 VEV-YQEL------GVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 229 ~~~-~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
... ...+ +.|.|......|.|.|+|.+.|....
T Consensus 172 ~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 172 TPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp CCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred cCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 111 1112 23455555555799999999997644
No 358
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.65 E-value=8.1e-16 Score=137.72 Aligned_cols=172 Identities=17% Similarity=0.224 Sum_probs=114.8
Q ss_pred ceeEEcCCeEEEEEEccC-CCCCCeEEEEeCCCCC-------------------CcCCCceEEee----eceEEEeccCC
Q psy17058 190 SQTFIVGDRADIQCVLEA-GEPSPTQTWIRPDNDG-------------------KFGPDVEVYQE----LGVLRFNNIAT 245 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~-~~p~~~v~W~~~~~~~-------------------~~~~~~~~~~~----~~~l~i~~~~~ 245 (471)
...+.+|++++|.|.+.. ..+...+.|+|..... ....++.+..+ ...|.|.+++.
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (253)
T 3liz_H 9 GGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKS 88 (253)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCG
T ss_pred CEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCCh
Confidence 456889999999999832 1235689999853210 11234444332 23499999999
Q ss_pred CCCeEEEEEEEcCC----CceEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccC
Q psy17058 246 GDEGKYTCIAENSA----GKEVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPF 315 (471)
Q Consensus 246 ~d~G~Y~C~~~~~~----~~~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~ 315 (471)
+|+|.|.|.+.+.. ........|.|. .+|.+...+. ...+..|+.+.|.|.+.+ .|.+ .+.|++++..+
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~ 167 (253)
T 3liz_H 89 EDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAP-GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 167 (253)
T ss_dssp GGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC-------CCEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred hhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecC-CcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeec
Confidence 99999999998752 222333566665 3455543322 234567999999999998 7766 89999998744
Q ss_pred CCc-----ccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 316 DRN-----LERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 316 ~~~-----~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
... .........+.|.|.....+| |.|+|.|.|..+.......|.+.
T Consensus 168 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 168 GVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp TEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred ceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 211 000122334679999999999 99999999999988777777665
No 359
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.65 E-value=6e-16 Score=138.42 Aligned_cols=167 Identities=16% Similarity=0.196 Sum_probs=98.4
Q ss_pred ceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCC--CC-----------------cCCCceEEee----eceEEEeccC
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDND--GK-----------------FGPDVEVYQE----LGVLRFNNIA 244 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~--~~-----------------~~~~~~~~~~----~~~l~i~~~~ 244 (471)
...+.+|++++|.|.+ .+.+ ...+.|+|.... .. ...++.+..+ ...|.|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (257)
T 3bn9_D 9 GGLVKPGGSLRLSCAA-SGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLR 87 (257)
T ss_dssp CEEECTTCEEEEEEEE-ESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCC
T ss_pred CEEEcCCCcEEEEEEe-ccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCC
Confidence 3467899999999998 4444 578999986421 10 1234444321 3479999999
Q ss_pred CCCCeEEEEEEEcCCC----------c---eEEEEEEEEEe----CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-e
Q psy17058 245 TGDEGKYTCIAENSAG----------K---EVMNAYIHVLT----LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-T 305 (471)
Q Consensus 245 ~~d~G~Y~C~~~~~~~----------~---~~~~~~l~V~~----~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~ 305 (471)
.+|+|.|.|.+.+..+ . ......|.|.. +|.+.+..+. ..+.+|+.++|.|.+.|. |.+ .
T Consensus 88 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~-~~~~~g~~v~L~C~~~g~~P~pi~ 166 (257)
T 3bn9_D 88 AEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVT 166 (257)
T ss_dssp GGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC------------CCCEEEEEBSSCCE
T ss_pred hhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCc-ccccCCCcEEEEEEEeeEECCCcE
Confidence 9999999999998754 1 11234677764 3544443222 245689999999999985 777 9
Q ss_pred EEEEeCCccCCCccc------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 306 VSWVKYIAPFDRNLE------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVIT 359 (471)
Q Consensus 306 i~W~~~~~~~~~~~~------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 359 (471)
+.|++++..+..... .......+.|.|.....+| |.|+|.|.|..........
T Consensus 167 v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~~~~~ 225 (257)
T 3bn9_D 167 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 225 (257)
T ss_dssp EEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEEEEEE
T ss_pred EEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcCEEEE
Confidence 999999876432110 0011233567888888778 9999999997665444433
No 360
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.65 E-value=1.2e-16 Score=138.45 Aligned_cols=172 Identities=15% Similarity=0.204 Sum_probs=103.1
Q ss_pred CeeeecCCCcee-EEcCCeEEEEEEccCCCC---CCeEEEEeCCCCCCcCC-CceEEeeeceEEE------eccCCCCCe
Q psy17058 181 PRIRIHPNASQT-FIVGDRADIQCVLEAGEP---SPTQTWIRPDNDGKFGP-DVEVYQELGVLRF------NNIATGDEG 249 (471)
Q Consensus 181 p~~~~~~~~~~~-v~~g~~~~L~C~~~~~~p---~~~v~W~~~~~~~~~~~-~~~~~~~~~~l~i------~~~~~~d~G 249 (471)
|.+.+.++.... +.+|+.++|.|.+....| ...++|+|++..+.... .......++.+.+ ......|+|
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g 81 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCc
Confidence 444454443333 368999999999943332 35999999986533211 0011111233333 233334599
Q ss_pred EEEEEEEcCCCceEEEEEE----EEEeCCceeeCCCccEEecCCCcEEEEEEEeec-CC-CeEEEEeCCccCCCcccc-c
Q psy17058 250 KYTCIAENSAGKEVMNAYI----HVLTLPAVTITPSEYVSVRPGEPLTLECEATGR-PM-PTVSWVKYIAPFDRNLER-D 322 (471)
Q Consensus 250 ~Y~C~~~~~~~~~~~~~~l----~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~i~W~~~~~~~~~~~~~-~ 322 (471)
.|+|.+.|..+.......+ .+..+|.+.+.+.....+ .|..+.|.|.+.|. |+ +.+.|+++|..+...... .
T Consensus 82 ~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~ 160 (207)
T 1l6x_A 82 EYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDEL-TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP 160 (207)
T ss_dssp CEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCC
T ss_pred eEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHh-cCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCc
Confidence 9999999987654233233 334567666554332223 45669999999984 54 399999999876532110 0
Q ss_pred --c----cCceeEEEEeecCCCCCeEEEEEEEcCCCc
Q psy17058 323 --E----LTSRAVYTIASVRESDAGQYKCIGKNSAGT 353 (471)
Q Consensus 323 --~----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 353 (471)
. ....+.|.|.....+|.|.|+|.|.|....
T Consensus 161 ~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 161 VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp EECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred eECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 1 112234556665567899999999998654
No 361
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.65 E-value=9.3e-16 Score=136.02 Aligned_cols=167 Identities=17% Similarity=0.332 Sum_probs=107.8
Q ss_pred EEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCCCC------------------CCCCcc------cCcEEEEcCCCC
Q psy17058 94 VQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQEQ------------------LPPNMI------AGETLIINGITK 149 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~------------------~~~~~~------~~~~L~i~~v~~ 149 (471)
+...|..+.+.+|++++|.|....+.+.+.|+|++... ...+.. ....|.|.+++.
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 81 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG
T ss_pred cccCCCeeEEeCCCcEEEEEEeCCCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc
Confidence 44567788999999999999933457899999973211 111111 234899999999
Q ss_pred CCCeEEEEEEEecCC----ceeeeeEEEEEeec----cCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCC
Q psy17058 150 ADEGVYICSIQNAQG----NVFQDYASIQVDKR----EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPD 220 (471)
Q Consensus 150 ~D~G~Y~C~~~~~~~----~~~~~~~~l~v~~~----~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~ 220 (471)
+|+|.|.|.+.+..+ ........|.|... .+|.+.+..+....+.+|+.++|.|.+....|. +.+.|++++
T Consensus 82 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g 161 (238)
T 1bec_A 82 SQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNG 161 (238)
T ss_dssp GGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETT
T ss_pred ccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECC
Confidence 999999999998632 11223345666532 356666554444455689999999999544565 499999988
Q ss_pred CCCCcCCCc---eEEeeece------EEEeccCCCC-CeEEEEEEEcCCC
Q psy17058 221 NDGKFGPDV---EVYQELGV------LRFNNIATGD-EGKYTCIAENSAG 260 (471)
Q Consensus 221 ~~~~~~~~~---~~~~~~~~------l~i~~~~~~d-~G~Y~C~~~~~~~ 260 (471)
..+...... .....++. |.|......| .|.|+|.+.|...
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 162 KEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp EEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred EECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 764332111 11122233 3333333333 6789999998743
No 362
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.64 E-value=1.4e-15 Score=136.04 Aligned_cols=170 Identities=15% Similarity=0.271 Sum_probs=111.2
Q ss_pred CcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCCCC------------------CCCCcc------cCcEEEEcCC
Q psy17058 92 NEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQEQ------------------LPPNMI------AGETLIINGI 147 (471)
Q Consensus 92 ~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~------------------~~~~~~------~~~~L~i~~v 147 (471)
..+...|..+.+.+|++++|.|....+.+.+.|+++.... ...+.. ....|.|.++
T Consensus 4 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v 83 (252)
T 1oga_E 4 GGITQSPKYLFRKEGQNVTLSCEQNLNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSA 83 (252)
T ss_dssp -CEECSCSEEEEETTCCEEECCEECSCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSC
T ss_pred ccceEcCCeEEEcCCCcEEEEEEeCCCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcC
Confidence 3456667888999999999999933457899999963111 111111 2358999999
Q ss_pred CCCCCeEEEEEEEecCC--ceeeeeEEEEEee----ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCC
Q psy17058 148 TKADEGVYICSIQNAQG--NVFQDYASIQVDK----REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPD 220 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~--~~~~~~~~l~v~~----~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~ 220 (471)
+.+|+|.|.|.+.+... ........+.|.. ..+|.+.+..+....+.+|+.++|.|.+....|. +.++|++++
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g 163 (252)
T 1oga_E 84 QKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNG 163 (252)
T ss_dssp CSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETT
T ss_pred ChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECC
Confidence 99999999999988521 1122234566653 2456666554433345579999999999544565 599999988
Q ss_pred CCCCcCCCc-------------eEEeeeceEEEeccCCC-CCeEEEEEEEcCCCc
Q psy17058 221 NDGKFGPDV-------------EVYQELGVLRFNNIATG-DEGKYTCIAENSAGK 261 (471)
Q Consensus 221 ~~~~~~~~~-------------~~~~~~~~l~i~~~~~~-d~G~Y~C~~~~~~~~ 261 (471)
..+...... ..+...+.|.|...... +.|.|+|.+.|....
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 164 KEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp EEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 754322110 01111334777766654 678999999997543
No 363
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.64 E-value=3.1e-15 Score=130.46 Aligned_cols=177 Identities=21% Similarity=0.209 Sum_probs=121.1
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCc----c-----cCcEEEEcCCCCCCCeEEEEEE
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNM----I-----AGETLIINGITKADEGVYICSI 159 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~----~-----~~~~L~i~~v~~~D~G~Y~C~~ 159 (471)
.+|.| ..|..+.+.+|+.+.|.|. .+.|.+.+.|+++ +..+.... . ....|.|.+++.+|+|.|+|.|
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~-g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 95 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRD-GQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTA 95 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEET-TEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEEC-CeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEE
Confidence 45666 5777889999999999999 8888999999999 55554331 1 2578999999999999999999
Q ss_pred EecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEcc---CCCCCC--eEEEEeCCCCCCcCCCceEE--
Q psy17058 160 QNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLE---AGEPSP--TQTWIRPDNDGKFGPDVEVY-- 232 (471)
Q Consensus 160 ~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~---~~~p~~--~v~W~~~~~~~~~~~~~~~~-- 232 (471)
.|..|. ......+.|. .+|...... .....+..+.|.|... .+.|.. .+.|.+++...-........
T Consensus 96 ~n~~g~-~~~~~~l~v~--~~P~~p~~~---~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~ 169 (215)
T 3mtr_A 96 VNRIGQ-ESLEFILVQA--DTPSSPSID---QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEA 169 (215)
T ss_dssp ECSSCE-EEEEEEEEEC--CCCCCCEEE---EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHH
T ss_pred EECCCc-eEEEEEEEEC--CCCCCCcce---EEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccc
Confidence 999887 5555555554 333221111 1123567889999742 222333 47888876541111100000
Q ss_pred eeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCC
Q psy17058 233 QELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLP 274 (471)
Q Consensus 233 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p 274 (471)
.....|.|.++...+.|.|+|.|.|..|....+..+.+..+|
T Consensus 170 ~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 170 SMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp HHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred cccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 112679999999999999999999999876655555555443
No 364
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.64 E-value=2e-15 Score=133.92 Aligned_cols=164 Identities=15% Similarity=0.230 Sum_probs=107.5
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC-----------------cCCCceEEe---eeceEEEeccCCCCC
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK-----------------FGPDVEVYQ---ELGVLRFNNIATGDE 248 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~-----------------~~~~~~~~~---~~~~l~i~~~~~~d~ 248 (471)
....+.+|+.++|.|.+ . .+.+.+.|+|++.... ...++.+.. ....|.|.+++.+|+
T Consensus 7 ~~v~v~~G~~v~L~C~~-~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~ 84 (238)
T 1bec_A 7 RNKVAVTGGKVTLSCQQ-T-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQT 84 (238)
T ss_dssp SEEEEETTCCEEEEEEE-S-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGC
T ss_pred CeeEEeCCCcEEEEEEe-C-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccC
Confidence 45578899999999998 3 4578999999753210 123343332 234799999999999
Q ss_pred eEEEEEEEcCCC---c--eEEEEEEEEEe------CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeCCccC
Q psy17058 249 GKYTCIAENSAG---K--EVMNAYIHVLT------LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKYIAPF 315 (471)
Q Consensus 249 G~Y~C~~~~~~~---~--~~~~~~l~V~~------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~~~~~ 315 (471)
|.|.|.+.+..+ . ......|.|.. +|.+.+.......+.+|+.+.|.|.+.|. |.+ .+.|++++..+
T Consensus 85 G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~ 164 (238)
T 1bec_A 85 SVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEV 164 (238)
T ss_dssp EEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEE
T ss_pred EEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEEC
Confidence 999999998642 1 12234577764 45555443332345679999999999985 655 99999999877
Q ss_pred CCccccc---c--c----CceeEEEEeecCCCC-CeEEEEEEEcCCCce
Q psy17058 316 DRNLERD---E--L----TSRAVYTIASVRESD-AGQYKCIGKNSAGTE 354 (471)
Q Consensus 316 ~~~~~~~---~--~----~~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~ 354 (471)
....... . . ...+.|.|......| .|.|+|.|.|.....
T Consensus 165 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~ 213 (238)
T 1bec_A 165 HSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGLSE 213 (238)
T ss_dssp CTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCCCT
T ss_pred CCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCCCC
Confidence 5432110 0 0 112334444444444 678999999975443
No 365
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.63 E-value=3.1e-16 Score=138.31 Aligned_cols=167 Identities=13% Similarity=0.228 Sum_probs=111.2
Q ss_pred CCCcEE-EcCCceeecCCCcEEEEee-CC-CCC--CeEEEEeCCCCCC-CCCcc-----------cCcEEEEcCCCCCCC
Q psy17058 90 QANEVQ-VTPRQQSAPEGSQVTIECK-SN-DPS--ATIKWSKDNQEQL-PPNMI-----------AGETLIINGITKADE 152 (471)
Q Consensus 90 ~~~~v~-~~p~~~~v~~G~~v~l~C~-~~-~p~--~~v~W~~~~~~~~-~~~~~-----------~~~~L~i~~v~~~D~ 152 (471)
.+|.+. ..|....+.+|++++|.|. .+ .|. ..+.|+++ +..+ ..... ....|.|.+++.+|+
T Consensus 11 ~~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~-g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~ 89 (231)
T 2w59_A 11 SPIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTRE-KSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSG 89 (231)
T ss_dssp -CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECS-SSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CCCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcC-CeeccccccccceECCCCcEEEEEEEEecchhccCC
Confidence 345555 4577777899999999999 55 463 49999988 5444 21110 123699999999999
Q ss_pred eEEEEEEEecCCceeeeeEEEEEee----ccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeEEEEeCCCCCCcCC
Q psy17058 153 GVYICSIQNAQGNVFQDYASIQVDK----REMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQTWIRPDNDGKFGP 227 (471)
Q Consensus 153 G~Y~C~~~~~~~~~~~~~~~l~v~~----~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~~~~~~~~~~ 227 (471)
|.|+|.+.|..+. . ...+.|.. ..+|.+.+.......+ .+..++|.|.+....| .+.++|+|+|..+....
T Consensus 90 g~Y~C~~~~~~~~-~--~~~~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~ 165 (231)
T 2w59_A 90 ERFTCTVQHEELP-L--PLSKSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATE 165 (231)
T ss_dssp CCEEEEEECTTCS-S--CEEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGG
T ss_pred CEEEEEEEcCCCC-C--ceEEEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCcc
Confidence 9999999987654 2 23334432 2456665544332222 3567999999954455 47999999987754332
Q ss_pred Cc----e--------------EEeeeceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 228 DV----E--------------VYQELGVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 228 ~~----~--------------~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
.. . .+...+.|.|......|.|.|+|.|.|....
T Consensus 166 ~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 166 FVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp CEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred cccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 10 0 1111245778888888899999999997654
No 366
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=136.12 Aligned_cols=164 Identities=15% Similarity=0.204 Sum_probs=107.6
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc-----------------CC-CceEEeeec-eEEEeccCCCCCe
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF-----------------GP-DVEVYQELG-VLRFNNIATGDEG 249 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~-----------------~~-~~~~~~~~~-~l~i~~~~~~d~G 249 (471)
....+.+|+.++|.|.+ .+.+...+.|+|....... .. ++.+..... .|.|.+++.+|+|
T Consensus 9 ~~v~v~~G~~v~L~C~~-~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~DsG 87 (253)
T 3to4_D 9 RWRLVPRGQAVNLRCIL-KNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGR 87 (253)
T ss_dssp SEEEEESSCCEEEEEEC-SCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSCE
T ss_pred CeEEEeCCCcEEEEEEe-CCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhCe
Confidence 34578899999999998 6777789999984321110 01 222222111 1999999999999
Q ss_pred EEEEEEEcCCC------ceEEEEEEEEE------eCCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccC
Q psy17058 250 KYTCIAENSAG------KEVMNAYIHVL------TLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPF 315 (471)
Q Consensus 250 ~Y~C~~~~~~~------~~~~~~~l~V~------~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~ 315 (471)
.|.|.+.+..+ .......|.|. .+|.+.+.+.....+..|+.++|.|.+.| .|.+ .+.|+++|..+
T Consensus 88 ~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l 167 (253)
T 3to4_D 88 TLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 167 (253)
T ss_dssp EEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEEC
Confidence 99999987543 11223456665 34444433222222335789999999998 6666 89999999887
Q ss_pred CCcccc-------------cccCceeEEEEeecCCCC-CeEEEEEEEcCCCc
Q psy17058 316 DRNLER-------------DELTSRAVYTIASVRESD-AGQYKCIGKNSAGT 353 (471)
Q Consensus 316 ~~~~~~-------------~~~~~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 353 (471)
...... ......+.|.|.....+| .|.|+|.|.|....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~l~ 219 (253)
T 3to4_D 168 HSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (253)
T ss_dssp CTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCCCC
Confidence 543211 112223578888887777 77999999997543
No 367
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.63 E-value=4.3e-15 Score=129.47 Aligned_cols=165 Identities=15% Similarity=0.272 Sum_probs=104.9
Q ss_pred CCceeecCCCcEEEEee-CCCC--CCeEEEEeCCC-CCC------------------CCCcc-------cCcEEEEcCCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQ-EQL------------------PPNMI-------AGETLIINGIT 148 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~-~~~------------------~~~~~-------~~~~L~i~~v~ 148 (471)
|..+.+.+|++++|.|. .+.+ .+.+.|+|+.. ... ..+.. ....|+|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 66788999999999999 5543 57899998731 111 01111 12489999999
Q ss_pred CCCCeEEEEEEEecCCc--eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEeCCCCC
Q psy17058 149 KADEGVYICSIQNAQGN--VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIRPDNDG 223 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~~--~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~~~~~~ 223 (471)
.+|+|.|.|.+.+..+. .......|.|.. ..+|.+...++.. .+.+|+.++|.|.+....|.+ .++|++++..+
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 165 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGC-GDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSS 165 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCS-SCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCC
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCCh-hhccCCcEEEEEEEeeeEcCCcEEEEccCCccC
Confidence 99999999999886421 122335666652 2345555443322 356899999999995444776 99999998753
Q ss_pred CcCCCceEEeeeceE----EEeccCCCCCeEEEEEEEcCCCceEEE
Q psy17058 224 KFGPDVEVYQELGVL----RFNNIATGDEGKYTCIAENSAGKEVMN 265 (471)
Q Consensus 224 ~~~~~~~~~~~~~~l----~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 265 (471)
.......... .+.+ .|.....+| |.|+|.+.|..+.....
T Consensus 166 ~~~~~~~~~~-~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~ 209 (215)
T 1c5d_H 166 DVHTFPAVLQ-SGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVD 209 (215)
T ss_dssp SCCBCCCEEE-TTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEE
T ss_pred ceEecCcccC-CCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEE
Confidence 3221111111 1211 122344355 99999999987765433
No 368
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.63 E-value=4.2e-14 Score=146.48 Aligned_cols=248 Identities=14% Similarity=0.169 Sum_probs=163.2
Q ss_pred cCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcccCcEEEEcCCCCCC-CeEEEEEEEecCCceeeeeEEEEEe-eccC
Q psy17058 104 PEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMIAGETLIINGITKAD-EGVYICSIQNAQGNVFQDYASIQVD-KREM 180 (471)
Q Consensus 104 ~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D-~G~Y~C~~~~~~~~~~~~~~~l~v~-~~~~ 180 (471)
..+.++.|.|. .+.|.+.+.|.++ +..+.. .....+.|..+...+ ++.|+|.+.+..|........+... ...+
T Consensus 89 ~~~g~l~v~c~~~g~P~p~i~W~k~-g~~~~~--~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~ 165 (731)
T 2v5y_A 89 SPPGLLNVYVKVNNGPLGNPIWNIS-GDPTRT--WNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRT 165 (731)
T ss_dssp SCSEEEEEEEEETTCCCCSEEEEEC-CCCCSS--CEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSS
T ss_pred CCcceEEEEEecCCCCccceeEEEe-CCcCCc--eeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccc
Confidence 33458999999 8899999999999 544322 123467777653333 5889998877776533222222221 1234
Q ss_pred CeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEE-EE--eCCCCCCcCCCceEE--eeeceEEEeccCCCCCeEEEEEE
Q psy17058 181 PRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQT-WI--RPDNDGKFGPDVEVY--QELGVLRFNNIATGDEGKYTCIA 255 (471)
Q Consensus 181 p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~-W~--~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~ 255 (471)
|.+. .+ ....+.+|+.++|.|.+ .+.|.+.+. |+ +++..+.......+. ...+.|.|.++...|.|.|+|.|
T Consensus 166 p~~~-~~-~~~~v~~G~~v~l~C~~-~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A 242 (731)
T 2v5y_A 166 PHFL-RI-QNVEVNAGQFATFQCSA-IGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMI 242 (731)
T ss_dssp CEEC-CC-CCEEEETTSCEEEEEEE-ESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEE
T ss_pred cccc-cc-cceEEeCCCcEEEEEEe-CCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEE
Confidence 4443 33 45788999999999999 888988887 87 666654332111111 12468999999999999999999
Q ss_pred EcCCCc-eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEee---cCC-C--eEEEEeCCccCCCcccccccCcee
Q psy17058 256 ENSAGK-EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATG---RPM-P--TVSWVKYIAPFDRNLERDELTSRA 328 (471)
Q Consensus 256 ~~~~~~-~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g---~p~-~--~i~W~~~~~~~~~~~~~~~~~~~~ 328 (471)
.|..|. .+..+.|.|..+|.....+ .........+.|.|.... ..+ . .+.|...+.... ........
T Consensus 243 ~n~~G~~~s~~~~l~V~~~P~~~~~p--~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~~----~~~~~~~~ 316 (731)
T 2v5y_A 243 RTEGGVGISNYAELVVKEPPVPIAPP--QLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWN----DRQPVDST 316 (731)
T ss_dssp EETTEEEECCCEEEEEECCCCBSSCC--EEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSCE----EEEECCSS
T ss_pred ECCCCCcceeeEEEEEecCCCCCCCc--ceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCce----EEeccCcc
Confidence 999987 6667788888877654333 223335678889887632 122 2 467766533211 11123347
Q ss_pred EEEEeecCCCCCeEEEEEEE--cCCCceEEEEEEEEe
Q psy17058 329 VYTIASVRESDAGQYKCIGK--NSAGTEEKVITVAVE 363 (471)
Q Consensus 329 ~l~i~~~~~~d~G~Y~C~a~--n~~g~~~~~~~l~V~ 363 (471)
.+.|.++...+...|+|.|. |..|....+..+.+.
T Consensus 317 ~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~ 353 (731)
T 2v5y_A 317 SYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTR 353 (731)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEE
T ss_pred eEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEee
Confidence 88999999999889999999 999876544333443
No 369
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.62 E-value=3e-15 Score=114.22 Aligned_cols=93 Identities=26% Similarity=0.359 Sum_probs=76.1
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc--cccccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL--ERDELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
+|.+...+ .++.+.+|+++.|.|.+.|.|.|.+.|++++..+.... .........+|.|.+++.+|+|.|+|.|.|.
T Consensus 13 pP~f~~~p-~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 13 PPCFLRFP-RPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCEEEeCC-CcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 45554444 46789999999999999999999999999999886442 2223345678999999999999999999999
Q ss_pred CCceEEEEEEEEecCC
Q psy17058 351 AGTEEKVITVAVEHRP 366 (471)
Q Consensus 351 ~g~~~~~~~l~V~~~p 366 (471)
.|..+.++.|.|..+|
T Consensus 92 ~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 92 AGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TEEEEEEEEEEEEC--
T ss_pred CCEEEEEEEEEEEcCC
Confidence 9999999999998764
No 370
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.62 E-value=1.2e-15 Score=136.38 Aligned_cols=163 Identities=16% Similarity=0.261 Sum_probs=94.2
Q ss_pred CCceeecCCCcEEEEee-CCCC--CCeEEEEeCCCC-CC-------------------CCCcc-------cCcEEEEcCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQE-QL-------------------PPNMI-------AGETLIINGI 147 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~~-~~-------------------~~~~~-------~~~~L~i~~v 147 (471)
|..+.+.+|++++|.|. .+.+ .+.+.|+|.... .. ..+.. ....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 45678999999999999 5544 578999997321 11 11111 1348999999
Q ss_pred CCCCCeEEEEEEEecCC----------c--eeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-
Q psy17058 148 TKADEGVYICSIQNAQG----------N--VFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP- 212 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~----------~--~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~- 212 (471)
+.+|+|.|.|.+.+..+ . .......|.|.. ..+|.+.+..+.. .+.+|+.++|.|.+....|.+
T Consensus 87 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~-~~~~g~~v~L~C~~~g~~P~pi 165 (257)
T 3bn9_D 87 RAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPV 165 (257)
T ss_dssp CGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC------------CCCEEEEEBSSCC
T ss_pred ChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcc-cccCCCcEEEEEEEeeEECCCc
Confidence 99999999999998653 1 122334666653 2345554433322 356899999999995445776
Q ss_pred eEEEEeCCCCCCcCCCce------EEeeeceEEEeccCCCCCeEEEEEEEcCCCce
Q psy17058 213 TQTWIRPDNDGKFGPDVE------VYQELGVLRFNNIATGDEGKYTCIAENSAGKE 262 (471)
Q Consensus 213 ~v~W~~~~~~~~~~~~~~------~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 262 (471)
.++|++++..+....... .+...+.|.|..+...| |.|+|.+.|.....
T Consensus 166 ~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~ 220 (257)
T 3bn9_D 166 TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 220 (257)
T ss_dssp EEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTE
T ss_pred EEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCc
Confidence 999999987632211000 11113457777777777 99999999965443
No 371
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.62 E-value=9.9e-16 Score=137.19 Aligned_cols=165 Identities=15% Similarity=0.278 Sum_probs=108.5
Q ss_pred EEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCC------------------CC-Ccc-----cCcEEEEcCCC
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQL------------------PP-NMI-----AGETLIINGIT 148 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~------------------~~-~~~-----~~~~L~i~~v~ 148 (471)
+...|..+.+.+|++++|.|. .+.+...+.|+|...... .. +.. ... |.|.+++
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~ 82 (253)
T 3to4_D 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVAN 82 (253)
T ss_dssp CEEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEES
T ss_pred EEeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCC
Confidence 345577888999999999998 777778999998411110 00 111 112 9999999
Q ss_pred CCCCeEEEEEEEecCC---c--eeeeeEEEEEee----ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEEEe
Q psy17058 149 KADEGVYICSIQNAQG---N--VFQDYASIQVDK----REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTWIR 218 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~---~--~~~~~~~l~v~~----~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W~~ 218 (471)
.+|+|.|+|.+.+..+ . .......+.|.. ..+|.+.+.......+..|+.++|.|.+....|.+ .++|++
T Consensus 83 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k 162 (253)
T 3to4_D 83 MSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV 162 (253)
T ss_dssp CSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred hhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEE
Confidence 9999999999986543 1 122334555542 24555555443333344678999999995546766 899999
Q ss_pred CCCCCCcCCC-------------ceEEeeeceEEEeccCCCC-CeEEEEEEEcCC
Q psy17058 219 PDNDGKFGPD-------------VEVYQELGVLRFNNIATGD-EGKYTCIAENSA 259 (471)
Q Consensus 219 ~~~~~~~~~~-------------~~~~~~~~~l~i~~~~~~d-~G~Y~C~~~~~~ 259 (471)
++..+..... ...+...+.|.|.....+| .|.|+|.+.|..
T Consensus 163 ~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 163 NGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp TTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred CCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 8876433110 0111113467888887777 789999999864
No 372
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.61 E-value=3.6e-15 Score=131.38 Aligned_cols=164 Identities=18% Similarity=0.165 Sum_probs=106.8
Q ss_pred CCceeEEcCCeEEEEEEccCCC--CCCeEEEEeCCCC--CC----------------cCCCceEEee----eceEEEecc
Q psy17058 188 NASQTFIVGDRADIQCVLEAGE--PSPTQTWIRPDND--GK----------------FGPDVEVYQE----LGVLRFNNI 243 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~--p~~~v~W~~~~~~--~~----------------~~~~~~~~~~----~~~l~i~~~ 243 (471)
+....+.+|+.++|.|.+ .+. +...+.|+|.... .. ...++.+..+ ...|.|.++
T Consensus 8 p~~v~~~~G~~v~L~C~~-~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (230)
T 1ypz_F 8 EISISRPRDETAQISCKV-FIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSL 86 (230)
T ss_dssp CSEEEEETTSCEEEEEEE-CCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSC
T ss_pred CCEEEEeCCCcEEEEEEe-eccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcC
Confidence 345578899999999998 432 4578999986421 10 1233333321 237999999
Q ss_pred CCCCCeEEEEEEEcC--CC--ceEEEEEEEEEe---------CCceeeCCCccEEecCCCcEEEEEEEeec-CC-CeEEE
Q psy17058 244 ATGDEGKYTCIAENS--AG--KEVMNAYIHVLT---------LPAVTITPSEYVSVRPGEPLTLECEATGR-PM-PTVSW 308 (471)
Q Consensus 244 ~~~d~G~Y~C~~~~~--~~--~~~~~~~l~V~~---------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~i~W 308 (471)
+.+|+|.|.|.+.+. .. .....+.|.|.. +|...+.++....+..|+.++|.|.+.|. |. +.+.|
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W 166 (230)
T 1ypz_F 87 EEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVYW 166 (230)
T ss_dssp CGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEEEE
T ss_pred ChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEEEE
Confidence 999999999999874 11 112234677762 23333332222234568999999999985 75 59999
Q ss_pred Ee-CCccCCCccc------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCce
Q psy17058 309 VK-YIAPFDRNLE------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTE 354 (471)
Q Consensus 309 ~~-~~~~~~~~~~------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 354 (471)
++ ++..+..... .......+.|.|..... + |.|+|.|.|..+..
T Consensus 167 ~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~ 217 (230)
T 1ypz_F 167 KEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKG 217 (230)
T ss_dssp ECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTT
T ss_pred EccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCC
Confidence 99 7776542211 01112235788888775 4 99999999987754
No 373
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.61 E-value=6.9e-15 Score=131.56 Aligned_cols=166 Identities=15% Similarity=0.172 Sum_probs=109.7
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCC-----------------cCCCceEEe---eeceEEEeccCCCC
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGK-----------------FGPDVEVYQ---ELGVLRFNNIATGD 247 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~-----------------~~~~~~~~~---~~~~l~i~~~~~~d 247 (471)
+....+.+|+.++|.|.+ . .+...+.|+|...... ...++.+.. ....|.|.+++.+|
T Consensus 10 p~~v~v~~G~~v~L~C~~-~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D 87 (252)
T 1oga_E 10 PKYLFRKEGQNVTLSCEQ-N-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNP 87 (252)
T ss_dssp CSEEEEETTCCEEECCEE-C-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCC
T ss_pred CCeEEEcCCCcEEEEEEe-C-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhh
Confidence 345678899999999998 3 4578999998642100 123333322 13579999999999
Q ss_pred CeEEEEEEEcCC---CceEEEEEEEEEe------CCceeeCCCccEEecCCCcEEEEEEEeec-CCC-eEEEEeCCccCC
Q psy17058 248 EGKYTCIAENSA---GKEVMNAYIHVLT------LPAVTITPSEYVSVRPGEPLTLECEATGR-PMP-TVSWVKYIAPFD 316 (471)
Q Consensus 248 ~G~Y~C~~~~~~---~~~~~~~~l~V~~------~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~i~W~~~~~~~~ 316 (471)
+|.|.|.+.+.. ........|.|.. +|.+.+.......+.+|+.+.|.|.+.|. |.+ .+.|++++..+.
T Consensus 88 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~ 167 (252)
T 1oga_E 88 TAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 167 (252)
T ss_dssp CEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred CEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECC
Confidence 999999999862 1112234566653 45555443222234568999999999985 654 999999998765
Q ss_pred Cccccc-------------ccCceeEEEEeecCCC-CCeEEEEEEEcCCCceE
Q psy17058 317 RNLERD-------------ELTSRAVYTIASVRES-DAGQYKCIGKNSAGTEE 355 (471)
Q Consensus 317 ~~~~~~-------------~~~~~~~l~i~~~~~~-d~G~Y~C~a~n~~g~~~ 355 (471)
...... .....+.|.|...... |.|.|+|.|.|......
T Consensus 168 ~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 168 SGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp SSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred CCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 432110 1112345777776654 67899999999866543
No 374
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.61 E-value=3.4e-15 Score=131.55 Aligned_cols=166 Identities=22% Similarity=0.301 Sum_probs=106.1
Q ss_pred EEEcCCceeecCCCcEEEEee-CCC--CCCeEEEEeCCC-CCC------------------CCCcc-------cCcEEEE
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SND--PSATIKWSKDNQ-EQL------------------PPNMI-------AGETLII 144 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~~--p~~~v~W~~~~~-~~~------------------~~~~~-------~~~~L~i 144 (471)
+...|..+.+.+|++++|.|. .+. +...+.|+|... ... ..+.. ...+|.|
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 455577889999999999999 443 567899998632 111 11111 1238999
Q ss_pred cCCCCCCCeEEEEEEEec--CC-ceeeeeEEEEEeec-------cCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-Ce
Q psy17058 145 NGITKADEGVYICSIQNA--QG-NVFQDYASIQVDKR-------EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PT 213 (471)
Q Consensus 145 ~~v~~~D~G~Y~C~~~~~--~~-~~~~~~~~l~v~~~-------~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~ 213 (471)
.+++.+|+|.|.|.+.+. .. ........|.|... .+|...+..+....+.+|+.++|.|.+....|. +.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~ 163 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIR 163 (230)
T ss_dssp CSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCE
T ss_pred CcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeE
Confidence 999999999999999874 11 11223456666521 123333332323334578999999999545575 69
Q ss_pred EEEEe-CCCCCCcCCCceE------EeeeceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 214 QTWIR-PDNDGKFGPDVEV------YQELGVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 214 v~W~~-~~~~~~~~~~~~~------~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
++|++ ++..+........ +...+.|.|..... + |.|+|.+.|....
T Consensus 164 v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 164 VYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp EEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred EEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 99999 7665432111011 11134688887775 4 9999999997654
No 375
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.60 E-value=6.8e-16 Score=133.74 Aligned_cols=167 Identities=11% Similarity=0.174 Sum_probs=101.8
Q ss_pred CcEEEcCCceee--cCCCcEEEEee-CCCC----CCeEEEEeCCCCCCCCCc------ccCcEEEEcC---CCCC---CC
Q psy17058 92 NEVQVTPRQQSA--PEGSQVTIECK-SNDP----SATIKWSKDNQEQLPPNM------IAGETLIING---ITKA---DE 152 (471)
Q Consensus 92 ~~v~~~p~~~~v--~~G~~v~l~C~-~~~p----~~~v~W~~~~~~~~~~~~------~~~~~L~i~~---v~~~---D~ 152 (471)
|.+.+.|....+ .+|+++.|.|. .+.+ ...|.|+|+ +..+.... ..++.|.+.. +... |+
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~ 80 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD-GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG 80 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEET-TEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEEC-CccccCcccCCceeccCCcEEEEEEEEEEHHHccCC
Confidence 556666655544 79999999999 5443 459999999 43332211 1233343322 3344 49
Q ss_pred eEEEEEEEecCCceeeeeEEEEE--eeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCcCCCc
Q psy17058 153 GVYICSIQNAQGNVFQDYASIQV--DKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKFGPDV 229 (471)
Q Consensus 153 G~Y~C~~~~~~~~~~~~~~~l~v--~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~~~~~ 229 (471)
|.|+|.+.|..+. ......+.+ .+..+|.+.+.+.....+ .|..++|.|.+.+..|. +.++|+++|..+......
T Consensus 81 g~Y~C~a~n~~~~-~~~~~~v~~~~~~~~~P~v~~~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 158 (207)
T 1l6x_A 81 KEYKCKVSNKALP-APIEKTISKAKGQPREPQVYTLPPSRDEL-TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTT 158 (207)
T ss_dssp CCEEEEEECTTSS-SCEEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEEC
T ss_pred ceEEEEEEcCcCC-cceEEEeccCCCCCcCCEEEEECCChHHh-cCCcEEEEEEEeCeECCCeEEEEEECCeeccCcccc
Confidence 9999999998765 322333432 344567766655433223 56679999999443555 599999998764321111
Q ss_pred eE-Eeee------ceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 230 EV-YQEL------GVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 230 ~~-~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
.. ...+ +.|.|......|.|.|+|.+.|....
T Consensus 159 ~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 159 PPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 11 1112 23555555556799999999997643
No 376
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.58 E-value=1e-14 Score=128.73 Aligned_cols=171 Identities=15% Similarity=0.160 Sum_probs=107.3
Q ss_pred eeEEcCCeEEEEEEccCC---CCCCeEEEEeCCCCCC---------------------cCCCceEEee----eceEEEec
Q psy17058 191 QTFIVGDRADIQCVLEAG---EPSPTQTWIRPDNDGK---------------------FGPDVEVYQE----LGVLRFNN 242 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~~---~p~~~v~W~~~~~~~~---------------------~~~~~~~~~~----~~~l~i~~ 242 (471)
..+.+|++++|.|.+... .+...+.|||...... ...++.+... ...|.|.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 89 (232)
T 3qhz_H 10 ALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTN 89 (232)
T ss_dssp SEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECS
T ss_pred EEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECc
Confidence 467899999999998321 1223459998432100 1123333321 23599999
Q ss_pred cCCCCCeEEEEEEEcCC--------CceEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEeecCC--CeEEE
Q psy17058 243 IATGDEGKYTCIAENSA--------GKEVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATGRPM--PTVSW 308 (471)
Q Consensus 243 ~~~~d~G~Y~C~~~~~~--------~~~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~i~W 308 (471)
++.+|+|.|.|.+.+.. ........|.|. .+|.+...+. ...+..|+.+.|.|.+.+.++ ..+.|
T Consensus 90 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~-~~~~~~g~~v~L~C~~~~~~P~~~~v~W 168 (232)
T 3qhz_H 90 MDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSW 168 (232)
T ss_dssp CCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC--------CEEEEEEEEEEEBSSCCEEEE
T ss_pred CChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecc-cccccCCCcEEEEEEEeeEeCCCeEEEE
Confidence 99999999999998753 112233456664 3454543222 234567999999999998443 36889
Q ss_pred EeCCccCCCcc------cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 309 VKYIAPFDRNL------ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 309 ~~~~~~~~~~~------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
++++..+.... ........+.|.|.....+| |.|+|.|.|..+.......|.+.
T Consensus 169 ~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~~ 228 (232)
T 3qhz_H 169 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 228 (232)
T ss_dssp GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred EECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCCC
Confidence 99886543110 01112234578899988889 99999999998888777766554
No 377
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.58 E-value=7e-15 Score=130.38 Aligned_cols=170 Identities=16% Similarity=0.236 Sum_probs=109.3
Q ss_pred ceeEEcCCeEEEEEEccCCCC----CCeEEEEeCCCCCC------------------------cCCCceEEee----ece
Q psy17058 190 SQTFIVGDRADIQCVLEAGEP----SPTQTWIRPDNDGK------------------------FGPDVEVYQE----LGV 237 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p----~~~v~W~~~~~~~~------------------------~~~~~~~~~~----~~~ 237 (471)
...+.+|+.++|.|.+ .+.+ ...+.||+...... ...++.+..+ ...
T Consensus 9 ~~~v~~G~~v~L~C~~-~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 87 (239)
T 3tv3_H 9 PTLVEASETLSLTCAV-SGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVF 87 (239)
T ss_dssp CSEECTTSCEEEEEEE-ESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEE
T ss_pred CEEEcCCCCEEEEEEE-cCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEE
Confidence 4568899999999998 4433 34899998532211 0122323221 235
Q ss_pred EEEeccCCCCCeEEEEEEEcCCC-------------ceEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEee
Q psy17058 238 LRFNNIATGDEGKYTCIAENSAG-------------KEVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATG 300 (471)
Q Consensus 238 l~i~~~~~~d~G~Y~C~~~~~~~-------------~~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g 300 (471)
|.|.+++.+|+|.|.|.+.+..+ .......|.|. ..|.+...+. ...+..|+.+.|.|.+.+
T Consensus 88 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~-~~~~~~g~~v~l~C~~~~ 166 (239)
T 3tv3_H 88 LKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKD 166 (239)
T ss_dssp EEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECC-CCCC--TTEEEEEEEEEE
T ss_pred EEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECC-ChhhccCCcEEEEEEEee
Confidence 99999999999999999976531 01122345554 2344443222 223457999999999998
Q ss_pred -cCCC-eEEEEeCCccCCCcc------cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 301 -RPMP-TVSWVKYIAPFDRNL------ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 301 -~p~~-~i~W~~~~~~~~~~~------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
.|.+ .+.|++++..+.... ........+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 167 ~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 167 YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 5544 689999887543111 01112234578899988888 9999999999887776666554
No 378
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.58 E-value=2.6e-16 Score=137.18 Aligned_cols=171 Identities=21% Similarity=0.300 Sum_probs=107.9
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCCCCCcC--------CCceEEeeeceEEEeccCCCCCe
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDNDGKFG--------PDVEVYQELGVLRFNNIATGDEG 249 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~~~~~~--------~~~~~~~~~~~l~i~~~~~~d~G 249 (471)
+|.+.+..+....+.+|+.++|.|.+....| .+.+.| + +..+... ..... .....|.|.+++.+|+|
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~-~~~~~L~I~~~~~~D~g 79 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCY-SVSSVLPGCAEPWNHGK 79 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCC-CEEEECTTTHHHHHHTC
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcE-EEEEEEEEeHHHcCCCC
Confidence 3445455444556789999999999943334 268999 4 3332210 00011 12446888888889999
Q ss_pred EEEEEEEcCCCceEEEEEEE---EEeCCceeeCCCccEEecCCCcEEEEEEEeec-CC-CeEEEEeCCccCCCcc--cc-
Q psy17058 250 KYTCIAENSAGKEVMNAYIH---VLTLPAVTITPSEYVSVRPGEPLTLECEATGR-PM-PTVSWVKYIAPFDRNL--ER- 321 (471)
Q Consensus 250 ~Y~C~~~~~~~~~~~~~~l~---V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~i~W~~~~~~~~~~~--~~- 321 (471)
.|+|.+.|..+.......+. +..+|.+.+.+.....+..|+.+.|.|.+.|. |. +.+.|+++|..+.... ..
T Consensus 80 ~Y~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 159 (214)
T 1ow0_A 80 TFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWA 159 (214)
T ss_dssp EEEEEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECC
T ss_pred eEEEEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecC
Confidence 99999998765433333332 34567666554332335679999999999995 54 4999999998875431 00
Q ss_pred cccC---ce------eEEEEeecCCCCCeEEEEEEEcCCCc
Q psy17058 322 DELT---SR------AVYTIASVRESDAGQYKCIGKNSAGT 353 (471)
Q Consensus 322 ~~~~---~~------~~l~i~~~~~~d~G~Y~C~a~n~~g~ 353 (471)
.... .+ +.|.|.....++.|.|+|.|.|....
T Consensus 160 ~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 160 SRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp CEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred CcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 0111 22 33445444445689999999998654
No 379
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.58 E-value=6.8e-15 Score=129.88 Aligned_cols=171 Identities=12% Similarity=0.239 Sum_probs=104.6
Q ss_pred CCceeecCCCcEEEEee-CCC--CCCeE--EEEeCCCCCC----------------------CCCcc-------cCcEEE
Q psy17058 98 PRQQSAPEGSQVTIECK-SND--PSATI--KWSKDNQEQL----------------------PPNMI-------AGETLI 143 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~--p~~~v--~W~~~~~~~~----------------------~~~~~-------~~~~L~ 143 (471)
|..+.+.+|++|+|.|. .+. ....+ .||+...... ..+.. ....|.
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 86 (232)
T 3qhz_H 7 SGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLT 86 (232)
T ss_dssp ECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEE
T ss_pred CCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEE
Confidence 44678999999999999 432 22344 9998521110 01111 223699
Q ss_pred EcCCCCCCCeEEEEEEEecCC-------ceeeeeEEEEEe--eccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCe
Q psy17058 144 INGITKADEGVYICSIQNAQG-------NVFQDYASIQVD--KREMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPT 213 (471)
Q Consensus 144 i~~v~~~D~G~Y~C~~~~~~~-------~~~~~~~~l~v~--~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~ 213 (471)
|.+++.+|+|.|.|.+.+..+ ........+.|. ...+|.+....+. ..+..|+.++|.|.+....| ...
T Consensus 87 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~~~~P~~~~ 165 (232)
T 3qhz_H 87 MTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVT 165 (232)
T ss_dssp ECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC--------CEEEEEEEEEEEBSSCCE
T ss_pred ECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEeccc-ccccCCCcEEEEEEEeeEeCCCeE
Confidence 999999999999999986521 112333455554 2344555533332 24567999999999955455 457
Q ss_pred EEEEeCCCCCCcCCCc------eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 214 QTWIRPDNDGKFGPDV------EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 214 v~W~~~~~~~~~~~~~------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
+.|++++..+...... ..+...+.|.|......| |.|+|.+.|..+.......|.+
T Consensus 166 v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 166 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp EEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 8999988643211110 111223568899988888 9999999998766665555443
No 380
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.58 E-value=1.2e-14 Score=109.42 Aligned_cols=91 Identities=21% Similarity=0.378 Sum_probs=74.8
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc----cccccCceeEEEEeecCCCCCeEEEEEEE
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL----ERDELTSRAVYTIASVRESDAGQYKCIGK 348 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~----~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 348 (471)
+|.+... +.++.+.+|+.+.|.|.+.|.|.|.+.|++++..+.... .........+|.|.+++.+|+|.|+|.|.
T Consensus 5 PP~i~~~-p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 5 PPKIEAL-PSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEECCC-CSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEeC-CCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 3444433 346789999999999999999999999999999886432 22234456789999999999999999999
Q ss_pred cCCCceEEEEEEEEec
Q psy17058 349 NSAGTEEKVITVAVEH 364 (471)
Q Consensus 349 n~~g~~~~~~~l~V~~ 364 (471)
|..|..+.++.|.|+.
T Consensus 84 N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCEEEEEEEEEEEE
Confidence 9999999999999864
No 381
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.58 E-value=8.7e-15 Score=129.74 Aligned_cols=170 Identities=15% Similarity=0.253 Sum_probs=107.8
Q ss_pred CCceeecCCCcEEEEee-CCCC----CCeEEEEeCCCCCC-------------------------CCCcc-------cCc
Q psy17058 98 PRQQSAPEGSQVTIECK-SNDP----SATIKWSKDNQEQL-------------------------PPNMI-------AGE 140 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~p----~~~v~W~~~~~~~~-------------------------~~~~~-------~~~ 140 (471)
|..+.+.+|++|+|.|. .+.+ ...+.||+...... ..+.. ...
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 7 SGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp ESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 55788999999999999 4443 45899998522110 00000 223
Q ss_pred EEEEcCCCCCCCeEEEEEEEecCC------------ceeeeeEEEEEe--eccCCeeeecCCCceeEEcCCeEEEEEEcc
Q psy17058 141 TLIINGITKADEGVYICSIQNAQG------------NVFQDYASIQVD--KREMPRIRIHPNASQTFIVGDRADIQCVLE 206 (471)
Q Consensus 141 ~L~i~~v~~~D~G~Y~C~~~~~~~------------~~~~~~~~l~v~--~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~ 206 (471)
.|.|.+++.+|+|.|.|.+.+..+ ........+.|. ....|.+...++.. .+..|+.++|.|.+.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~-~~~~g~~v~l~C~~~ 165 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSS-KSTSGGTAALGCLVK 165 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCC-CC--TTEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCCh-hhccCCcEEEEEEEe
Confidence 699999999999999999986531 011223345553 23345555443322 345799999999995
Q ss_pred CCCCC-CeEEEEeCCCCCCcCCCc------eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy17058 207 AGEPS-PTQTWIRPDNDGKFGPDV------EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIH 269 (471)
Q Consensus 207 ~~~p~-~~v~W~~~~~~~~~~~~~------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 269 (471)
...|. ..+.|++++..+...... ..+...+.|.|......| |.|+|.+.|..+.......|.
T Consensus 166 ~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 234 (239)
T 3tv3_H 166 DYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 234 (239)
T ss_dssp EEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECC
T ss_pred eEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEec
Confidence 54564 469999988643211110 111223468899988888 999999999876655554443
No 382
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.58 E-value=3.2e-15 Score=132.03 Aligned_cols=161 Identities=14% Similarity=0.166 Sum_probs=92.2
Q ss_pred eEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEE-ecCCCcEEEEEEEeecC----CCeEEEEeCCccCCCccc---
Q psy17058 249 GKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVS-VRPGEPLTLECEATGRP----MPTVSWVKYIAPFDRNLE--- 320 (471)
Q Consensus 249 G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~-~~~g~~v~l~C~~~g~p----~~~i~W~~~~~~~~~~~~--- 320 (471)
|.|.|.++|..+. .... .+..+|.+.+.++.... +..|+.+.|.|.+.|++ ..++.|+++|..+.....
T Consensus 1 ~~~~~~~~~~~~~--c~~~-~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~ 77 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAP-ELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR 77 (240)
T ss_dssp -------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCC
T ss_pred CceeeeeeecCCC--CCcc-ccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccc
Confidence 6899999886553 1111 12335666666554444 56799999999999864 238999999988643211
Q ss_pred ----ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEE-ecCCCCCCCCCCCCCccccCCCcccCCCCCCCc
Q psy17058 321 ----RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAV-EHRPEYGPISPRPGADILPDGDEYYRPEPEEGE 395 (471)
Q Consensus 321 ----~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V-~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 395 (471)
.......+.|.|.....+|.|.|+|.|.|..+.......+.. ...
T Consensus 78 ~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~------------------------------ 127 (240)
T 4acp_A 78 EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ------------------------------ 127 (240)
T ss_dssp EEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSC------------------------------
T ss_pred eECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCC------------------------------
Confidence 011223357888877788899999999998874322222221 111
Q ss_pred eEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEeccc-CCc-eEEEecCCCCCCCc
Q psy17058 396 YVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGA-TPI-SIRWQPLQGYFPSH 456 (471)
Q Consensus 396 ~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~v~W~~~g~~l~~~ 456 (471)
..+|.+.+.+.......|+.+.|.|.+.|+ |++ .|+|+|||+++...
T Consensus 128 --------------~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~ 176 (240)
T 4acp_A 128 --------------PREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNY 176 (240)
T ss_dssp --------------CBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSE
T ss_pred --------------CCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCc
Confidence 136788776655444459999999999984 553 89999999987643
No 383
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.57 E-value=4.4e-16 Score=135.68 Aligned_cols=168 Identities=11% Similarity=0.217 Sum_probs=108.1
Q ss_pred CCcEE-EcCCceeecCCCcEEEEee-CCCCC---CeEEEEeCCCCCCCC-------Cc----ccCcEEEEcCCCCCCCeE
Q psy17058 91 ANEVQ-VTPRQQSAPEGSQVTIECK-SNDPS---ATIKWSKDNQEQLPP-------NM----IAGETLIINGITKADEGV 154 (471)
Q Consensus 91 ~~~v~-~~p~~~~v~~G~~v~l~C~-~~~p~---~~v~W~~~~~~~~~~-------~~----~~~~~L~i~~v~~~D~G~ 154 (471)
+|.+. ..|....+.+|++++|.|. .+.+. +.|.| ++ +..... .. .....|.|.+++.+|+|.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~~-~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~ 80 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TP-SSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT 80 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-SS-CSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCE
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-cC-CCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCe
Confidence 44444 4477888999999999999 65543 68999 44 322110 00 123468888999999999
Q ss_pred EEEEEEecCCceeeeeEEEEE-eeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCcCCCc---
Q psy17058 155 YICSIQNAQGNVFQDYASIQV-DKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKFGPDV--- 229 (471)
Q Consensus 155 Y~C~~~~~~~~~~~~~~~l~v-~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~~~~~--- 229 (471)
|+|.+.|..+. ......+.+ .+..+|.+.+.+.....+..|+.++|.|.+....|. +.++|+|++..+......
T Consensus 81 Y~C~~~~~~~~-~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 159 (214)
T 1ow0_A 81 FTCTAAYPESK-TPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWA 159 (214)
T ss_dssp EEEEECCSSCS-SCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECC
T ss_pred EEEEEecCCCC-CceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecC
Confidence 99999987654 222334432 345667776655443345679999999999544564 599999998765433101
Q ss_pred eEEe---eec------eEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 230 EVYQ---ELG------VLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 230 ~~~~---~~~------~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
.... .++ .|.|......+.|.|+|.+.|....
T Consensus 160 ~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 160 SRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp CEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred CcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 0111 233 3444444445689999999987543
No 384
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.57 E-value=1.4e-14 Score=146.02 Aligned_cols=161 Identities=17% Similarity=0.285 Sum_probs=110.1
Q ss_pred CceeecCCCcEEEEee--CCCCCCeEEEEeCCCCCC-------------CCCcc--cCcEEEEcCCCCCCCeEEEEEEEe
Q psy17058 99 RQQSAPEGSQVTIECK--SNDPSATIKWSKDNQEQL-------------PPNMI--AGETLIINGITKADEGVYICSIQN 161 (471)
Q Consensus 99 ~~~~v~~G~~v~l~C~--~~~p~~~v~W~~~~~~~~-------------~~~~~--~~~~L~i~~v~~~D~G~Y~C~~~~ 161 (471)
....+.+|++++|.|. .+.|.+.+.|++++.... ..+.. .+++|.|.+++.+|+|.|+|.+.+
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEEC
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEc
Confidence 4567899999999999 477888999999843210 11111 456899999999999999999999
Q ss_pred cCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCCe-EEEEEEccCCCCCCeEEEEeCCCCCCcCCC-ceE--------
Q psy17058 162 AQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGDR-ADIQCVLEAGEPSPTQTWIRPDNDGKFGPD-VEV-------- 231 (471)
Q Consensus 162 ~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~-~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~-~~~-------- 231 (471)
..+........|.|..... ...+..... .+.+|+. +.|.|.+..+.|.+.++|++++..+..... ..+
T Consensus 454 ~~~~~~~~~~~l~V~~~~~-~p~i~~~~~-~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~ 531 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPG-KPEIVDSAS-ELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHP 531 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCC-CCEEESCCS-EECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECT
T ss_pred CCCceeEEEEEEEEEcCCC-CCEEEcCCc-ccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcC
Confidence 8877335556666653221 122222222 3445554 467999955579999999999877654322 111
Q ss_pred ----EeeeceEEEeccC-CCCCeEEEEEEEcCCCc
Q psy17058 232 ----YQELGVLRFNNIA-TGDEGKYTCIAENSAGK 261 (471)
Q Consensus 232 ----~~~~~~l~i~~~~-~~d~G~Y~C~~~~~~~~ 261 (471)
+...++|.|..++ .++.|.|+|.++|....
T Consensus 532 ~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 532 ETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp TTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred CCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 1113469999988 45588999999998643
No 385
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.56 E-value=1.1e-14 Score=129.60 Aligned_cols=173 Identities=16% Similarity=0.247 Sum_probs=108.0
Q ss_pred EcCCceeecCCCcEEEEee-CC--CCCCeEEEEeCCCCCC--------------------CCCcc-------cCcEEEEc
Q psy17058 96 VTPRQQSAPEGSQVTIECK-SN--DPSATIKWSKDNQEQL--------------------PPNMI-------AGETLIIN 145 (471)
Q Consensus 96 ~~p~~~~v~~G~~v~l~C~-~~--~p~~~v~W~~~~~~~~--------------------~~~~~-------~~~~L~i~ 145 (471)
..|..+.+.+|++|+|.|. .+ .+...+.||+...... ..+.. ...+|+|.
T Consensus 4 ~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 83 (248)
T 3u2s_H 4 VESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMN 83 (248)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 3466788999999999999 43 3456899998622110 11111 22369999
Q ss_pred CCCCCCCeEEEEEEEecC---------------------CceeeeeEEEEEe--eccCCeeeecCCCceeEEcCCeEEEE
Q psy17058 146 GITKADEGVYICSIQNAQ---------------------GNVFQDYASIQVD--KREMPRIRIHPNASQTFIVGDRADIQ 202 (471)
Q Consensus 146 ~v~~~D~G~Y~C~~~~~~---------------------~~~~~~~~~l~v~--~~~~p~~~~~~~~~~~v~~g~~~~L~ 202 (471)
+++.+|+|.|.|.+.+.. .........+.|. ...+|.+...++.. .+..|+.++|.
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~-~~~~g~~~~L~ 162 (248)
T 3u2s_H 84 SLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSS-KSTSGGTAALG 162 (248)
T ss_dssp SCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC-------CEEEEE
T ss_pred CCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCc-cccCCCcEEEE
Confidence 999999999999998642 1112223455554 22345555443322 34579999999
Q ss_pred EEccCCCC-CCeEEEEeCCCCCCcCCCc------eEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 203 CVLEAGEP-SPTQTWIRPDNDGKFGPDV------EVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 203 C~~~~~~p-~~~v~W~~~~~~~~~~~~~------~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
|.+....| ...+.|++++..+...... ..+...+.|.|......| |.|+|.+.|..+.......|.+
T Consensus 163 C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 163 CLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEcc
Confidence 99955566 5689999988643211100 111223468888888888 9999999998766555544443
No 386
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.56 E-value=3.4e-14 Score=134.80 Aligned_cols=171 Identities=12% Similarity=0.174 Sum_probs=113.4
Q ss_pred CeeeecCCCcee-EEcCCeEEEEEEccCCC---CC-CeEEEEeCCCCCCcCC-------CceEEeeeceEEEeccCCCCC
Q psy17058 181 PRIRIHPNASQT-FIVGDRADIQCVLEAGE---PS-PTQTWIRPDNDGKFGP-------DVEVYQELGVLRFNNIATGDE 248 (471)
Q Consensus 181 p~~~~~~~~~~~-v~~g~~~~L~C~~~~~~---p~-~~v~W~~~~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d~ 248 (471)
|.+.+.+..... +..|+.++|.|.+. +. |. ..|+|++++..+.... ..........|.|..++.+|+
T Consensus 167 p~v~~~~p~~~~~~~~g~~v~L~C~~~-g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~ 245 (376)
T 2aty_A 167 SSVFIFPPKPKDVLTITLTPKVTCVVV-DISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNG 245 (376)
T ss_pred cEEEEeCcCHHHceeeCCeeEEEEEEe-ccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCC
Confidence 334343333333 67899999999994 44 32 4799999986532111 001122244799999999999
Q ss_pred eEEEEEEEcCCCceEEEEEE----EEEeCCceeeCCCccEEecCCCcEEEEEEEeec-C-CCeEEEEeCCccCCCcccc-
Q psy17058 249 GKYTCIAENSAGKEVMNAYI----HVLTLPAVTITPSEYVSVRPGEPLTLECEATGR-P-MPTVSWVKYIAPFDRNLER- 321 (471)
Q Consensus 249 G~Y~C~~~~~~~~~~~~~~l----~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p-~~~i~W~~~~~~~~~~~~~- 321 (471)
|.|+|.+.+..+.......+ .+..+|.+.+.+.. .....|+.++|.|.+.|+ | .+.|+|++++..+......
T Consensus 246 g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~-~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~ 324 (376)
T 2aty_A 246 KEFKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPP-KEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQ 324 (376)
T ss_pred CEEEEEEecCCCCCceEEEEcCCCCCCcCCeEEeeCCC-HHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCC
Confidence 99999999876643322233 44567777766543 234458999999999985 4 3589999999877432110
Q ss_pred ------cccCceeEEEEeecCCCCCeEEEEEEEcCCCc
Q psy17058 322 ------DELTSRAVYTIASVRESDAGQYKCIGKNSAGT 353 (471)
Q Consensus 322 ------~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 353 (471)
......+.|.|.....+|.|.|+|.|.|....
T Consensus 325 ~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 325 PIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred ceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCCC
Confidence 11123456777777788899999999997654
No 387
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.55 E-value=5.3e-14 Score=123.93 Aligned_cols=170 Identities=15% Similarity=0.264 Sum_probs=108.7
Q ss_pred CCceeecCCCcEEEEee-CC--CCCCeEEEEeCCCCCC--------------------CCCcc-------cCcEEEEcCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SN--DPSATIKWSKDNQEQL--------------------PPNMI-------AGETLIINGI 147 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~--~p~~~v~W~~~~~~~~--------------------~~~~~-------~~~~L~i~~v 147 (471)
|..+.+.+|++|+|.|. .+ .....+.||+...... ..+.. ....|+|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (230)
T 3n9g_H 7 SGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSL 86 (230)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 44688999999999999 43 3456899998521110 01111 1235999999
Q ss_pred CCCCCeEEEEEEEecC-----Cc--eeeeeEEEEEe--eccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeEEEE
Q psy17058 148 TKADEGVYICSIQNAQ-----GN--VFQDYASIQVD--KREMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQTWI 217 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~-----~~--~~~~~~~l~v~--~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~ 217 (471)
+.+|+|.|.|.+.+.. +. .......+.|. ...+|.+....... .+.+|+.++|.|.+....| .+.+.|
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~~~~P~~~~v~W- 164 (230)
T 3n9g_H 87 RSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSW- 164 (230)
T ss_dssp CGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCC-CCCTTCEEEEEEEEEEEBSSCCEEEE-
T ss_pred ChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCc-cccCCCCEEEEEEEEeEECCCEEEEE-
Confidence 9999999999998753 11 12233456664 23445555333322 3458999999999955456 468999
Q ss_pred eCCCCCCcCC--------CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEE
Q psy17058 218 RPDNDGKFGP--------DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVL 271 (471)
Q Consensus 218 ~~~~~~~~~~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 271 (471)
++..+.... ....+...+.|.|.....+| |.|+|.+.|..+.......|.+.
T Consensus 165 -~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 165 -NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp -GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred -CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 554432110 00111223478999999999 99999999987666655555443
No 388
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.55 E-value=3.4e-14 Score=118.49 Aligned_cols=160 Identities=16% Similarity=0.221 Sum_probs=103.2
Q ss_pred EEEcCCceeecCCCcEEEEeeCCCCCC-eEEEEeCCCCCCC-CCcccCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeE
Q psy17058 94 VQVTPRQQSAPEGSQVTIECKSNDPSA-TIKWSKDNQEQLP-PNMIAGETLIINGITKADEGVYICSIQNAQGNVFQDYA 171 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~~~~p~~-~v~W~~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~ 171 (471)
+.+.|+...|.+|+++.|.|..+.+.+ .+.|.-..+.... ........|.|.+++. | |.|.|.+...... .....
T Consensus 2 v~v~P~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~-~~~~~ 78 (185)
T 1iam_A 2 TSVSPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQ-STAKT 78 (185)
T ss_dssp EEEESSEEEEETTEEEEEEEEECSSSCSEEEEECSSCEEEECSSSSSEEEEEEEEECS-C-BCCEEEEECSSCE-EEEEC
T ss_pred eEEECCCcEEeCCCCEEEEEEccCCCCccceEEeeCCCccEeccCCceeEEEEEecCc-C-CEEEEEEECCCCc-eEEEE
Confidence 678888899999999999999333344 4777532111111 1111235799999984 4 9999998654333 55555
Q ss_pred EEEEeeccCCe-eeecCCCceeEEcCCeEEEEEEccCCCCCC--eEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCC
Q psy17058 172 SIQVDKREMPR-IRIHPNASQTFIVGDRADIQCVLEAGEPSP--TQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDE 248 (471)
Q Consensus 172 ~l~v~~~~~p~-~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 248 (471)
.|.|. .+|. +.+.+. ...+.+|+.++|.|.+.++.|.. .++|+|++..+...... ......+|.+.....+|.
T Consensus 79 ~l~V~--~~P~~v~i~~~-~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~-~~~~~~tl~~~~~reD~g 154 (185)
T 1iam_A 79 FLTVY--WTPERVELAPL-PSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAV-GEPAEVTTTVLVRRDHHG 154 (185)
T ss_dssp EEEEE--BCCSEEEECCC-CSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECC-TTTEEEEEEEECCSSCSS
T ss_pred EEEEe--CCCCCCEEccC-CccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCC-CccccEEEEEeceeccCC
Confidence 55555 4444 444443 33588999999999997667775 58999988764322100 011123567665555555
Q ss_pred eEEEEEEEcCCC
Q psy17058 249 GKYTCIAENSAG 260 (471)
Q Consensus 249 G~Y~C~~~~~~~ 260 (471)
+.|+|+|.|..+
T Consensus 155 ~~~sC~A~~~l~ 166 (185)
T 1iam_A 155 AQFSCRTELDLR 166 (185)
T ss_dssp CEEEEEEEEECG
T ss_pred CeEEEEEEecCc
Confidence 699999998765
No 389
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.55 E-value=7.4e-13 Score=113.76 Aligned_cols=156 Identities=17% Similarity=0.283 Sum_probs=113.0
Q ss_pred eEEcCCeEEEEEEccCCCC---CCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 192 TFIVGDRADIQCVLEAGEP---SPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYI 268 (471)
Q Consensus 192 ~v~~g~~~~L~C~~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 268 (471)
.+..|+.++|.|.+..+.| +..++|+|++..+.- ....|.|..+...++|.|+|.+.+..+....+..+
T Consensus 13 ~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG--------aT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~V 84 (304)
T 3shs_A 13 CFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN--------NTATLTVADATSENAGSYKVTVQDTDTMTSVESEV 84 (304)
T ss_dssp SBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC--------CSSEEEESSCCGGGCEEEEEEEEETTTCCEEECCC
T ss_pred cccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC--------CcceEEeeeccccCCeEEEEEEEECCCCeeeeeeE
Confidence 5778999999999977877 558999999865221 24578899999999999999999977765444444
Q ss_pred EEEeCC--ceeeCCCccEEecCCCcEEEEEEE--ee-cC-----CCeEEEEeCCccCCCcccccccCceeEEEEeecCCC
Q psy17058 269 HVLTLP--AVTITPSEYVSVRPGEPLTLECEA--TG-RP-----MPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRES 338 (471)
Q Consensus 269 ~V~~~p--~~~~~~~~~~~~~~g~~v~l~C~~--~g-~p-----~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 338 (471)
.|...+ .+.+..+....+..|..+.|.+.+ .| .| ..+++|++++..+. ....|++......
T Consensus 85 tVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Is---------gAq~lT~sS~Tat 155 (304)
T 3shs_A 85 FLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVID---------TTQDITIQEFTAD 155 (304)
T ss_dssp EEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEE---------SSSEEEECSCCGG
T ss_pred EEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEcc---------CccccceeeEEec
Confidence 444433 333433344566778899999988 43 44 35999999986542 2336778888889
Q ss_pred CCeEEEEEEEcCCCce--EEEEEEEEec
Q psy17058 339 DAGQYKCIGKNSAGTE--EKVITVAVEH 364 (471)
Q Consensus 339 d~G~Y~C~a~n~~g~~--~~~~~l~V~~ 364 (471)
++|.|+|.+.|..+.. +.++.|.+..
T Consensus 156 eaG~YtV~VTn~~~~c~~s~~~~i~~~~ 183 (304)
T 3shs_A 156 KNGVYTVKVWGESEDSAASASTKIMLAT 183 (304)
T ss_dssp GCEEEEEEEESSSGGGCEEEEEEEEECE
T ss_pred CCeEEEEEEEcCCCCcccccceEEEEEc
Confidence 9999999999997733 4455555543
No 390
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.54 E-value=2.9e-14 Score=106.00 Aligned_cols=90 Identities=28% Similarity=0.423 Sum_probs=74.0
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCC--ccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYI--APFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~--~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
+|.+... .....+.+|+.+.|.|.+.|.|.|.+.|++++ ..+..............|.|.++..+|+|.|+|.|.|.
T Consensus 2 ~P~i~~~-~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 80 (93)
T 1wit_A 2 KPKILTA-SRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNE 80 (93)
T ss_dssp CCEECCC-CCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEET
T ss_pred CCeEEcC-CCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcC
Confidence 4555333 34678999999999999999999999999999 77755433333455688999999999999999999999
Q ss_pred CCceEEEEEEEEe
Q psy17058 351 AGTEEKVITVAVE 363 (471)
Q Consensus 351 ~g~~~~~~~l~V~ 363 (471)
.|..+.++.|.|.
T Consensus 81 ~G~~~~~~~l~V~ 93 (93)
T 1wit_A 81 LGEDEAIFEVIVQ 93 (93)
T ss_dssp TEEEEEEEEEEEC
T ss_pred CCeEEEEEEEEEC
Confidence 9999998888873
No 391
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.54 E-value=1.2e-13 Score=121.69 Aligned_cols=171 Identities=15% Similarity=0.197 Sum_probs=111.8
Q ss_pred ceeEEcCCeEEEEEEccCC-CCCCeEEEEeCCCCCC-------------------cCCCceEEee----eceEEEeccCC
Q psy17058 190 SQTFIVGDRADIQCVLEAG-EPSPTQTWIRPDNDGK-------------------FGPDVEVYQE----LGVLRFNNIAT 245 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~-~p~~~v~W~~~~~~~~-------------------~~~~~~~~~~----~~~l~i~~~~~ 245 (471)
...+.+|+.++|.|.+... .....+.|||...... ...++.+... ...|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (230)
T 3n9g_H 9 AEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRS 88 (230)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCh
Confidence 4568899999999998321 2346899997432110 1223433332 22499999999
Q ss_pred CCCeEEEEEEEcCC-----Cc---eEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEee-cC-CCeEEEEeC
Q psy17058 246 GDEGKYTCIAENSA-----GK---EVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATG-RP-MPTVSWVKY 311 (471)
Q Consensus 246 ~d~G~Y~C~~~~~~-----~~---~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p-~~~i~W~~~ 311 (471)
+|+|.|.|.+.+.. +. ......|.|. .+|.+...+. ...+.+|+.+.|.|.+.+ .| .+.+.| +
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~-~~~~~~g~~v~L~C~~~~~~P~~~~v~W--~ 165 (230)
T 3n9g_H 89 EDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSW--N 165 (230)
T ss_dssp GGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECC-CCCCCTTCEEEEEEEEEEEBSSCCEEEE--G
T ss_pred hhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCC-CccccCCCCEEEEEEEEeEECCCEEEEE--C
Confidence 99999999998753 11 1123456664 2344443222 223568999999999998 44 347999 5
Q ss_pred CccCCCccc--------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 312 IAPFDRNLE--------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 312 ~~~~~~~~~--------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
+..+..... .......+.|.|.....+| |.|+|.|.|..+.......|.|.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~~ 225 (230)
T 3n9g_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPKS 225 (230)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCCT
T ss_pred CcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCCC
Confidence 555432111 1112234578999999999 999999999988887777776654
No 392
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.54 E-value=5.4e-14 Score=125.22 Aligned_cols=172 Identities=16% Similarity=0.193 Sum_probs=108.6
Q ss_pred ceeEEcCCeEEEEEEccC-CCCCCeEEEEeCCCCCC-------------------cCCCceEEee----eceEEEeccCC
Q psy17058 190 SQTFIVGDRADIQCVLEA-GEPSPTQTWIRPDNDGK-------------------FGPDVEVYQE----LGVLRFNNIAT 245 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~-~~p~~~v~W~~~~~~~~-------------------~~~~~~~~~~----~~~l~i~~~~~ 245 (471)
...+.+|+.++|.|.+.. ..+...+.|||...... ...++.+..+ ...|.|.+++.
T Consensus 8 ~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 87 (248)
T 3u2s_H 8 GGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRV 87 (248)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCH
Confidence 456889999999999842 12346899998532210 1233433322 23599999999
Q ss_pred CCCeEEEEEEEcCC----------------------CceEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEe
Q psy17058 246 GDEGKYTCIAENSA----------------------GKEVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEAT 299 (471)
Q Consensus 246 ~d~G~Y~C~~~~~~----------------------~~~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~ 299 (471)
+|+|.|.|.+.+.. ........|.|. .+|.+...+. ...+..|+.+.|.|.+.
T Consensus 88 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~-~~~~~~g~~~~L~C~~~ 166 (248)
T 3u2s_H 88 EDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVK 166 (248)
T ss_dssp GGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECC-C------CEEEEEEEEE
T ss_pred HHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCC-CccccCCCcEEEEEEEe
Confidence 99999999998641 111122455665 3444443322 22445799999999999
Q ss_pred e-cC-CCeEEEEeCCccCCCcc------cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 300 G-RP-MPTVSWVKYIAPFDRNL------ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 300 g-~p-~~~i~W~~~~~~~~~~~------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
+ .| .+.+.|++++..+.... ........+.|.|.....+| |.|+|.|.|..+.......|.+.
T Consensus 167 ~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~~ 237 (248)
T 3u2s_H 167 DYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 237 (248)
T ss_dssp EEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC-
T ss_pred eEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEccC
Confidence 8 55 34799999886543110 01112234578888888888 99999999998877766666554
No 393
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.53 E-value=8.9e-14 Score=124.63 Aligned_cols=169 Identities=15% Similarity=0.272 Sum_probs=104.7
Q ss_pred CCceeecCCCcEEEEee-CC--CCCCeEEEEeCCCCCC--------------------CCCcc-------cCcEEEEcCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SN--DPSATIKWSKDNQEQL--------------------PPNMI-------AGETLIINGI 147 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~--~p~~~v~W~~~~~~~~--------------------~~~~~-------~~~~L~i~~v 147 (471)
|..+.+.+|++|+|.|. .+ .....+.|++...... ..+.. ...+|+|.++
T Consensus 30 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 109 (256)
T 3sob_H 30 SGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSL 109 (256)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCC
Confidence 34678999999999999 43 2346899998522111 11111 2235999999
Q ss_pred CCCCCeEEEEEEEecCC---------c-eeeeeEEEEEe--eccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeE
Q psy17058 148 TKADEGVYICSIQNAQG---------N-VFQDYASIQVD--KREMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQ 214 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~---------~-~~~~~~~l~v~--~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v 214 (471)
+.+|+|.|.|.+.+..+ . .......+.|. ...+|.+....+.. .+.+|+.++|.|.+....| ...+
T Consensus 110 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~~~~p~~~~v 188 (256)
T 3sob_H 110 RAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTV 188 (256)
T ss_dssp CGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC------TTEEEEEEEEEEEBSSCCEE
T ss_pred CcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCc-ccccCCcEEEEEEEEEEECCCeEE
Confidence 99999999999986431 1 12233456664 23445555333322 4568999999999955556 4689
Q ss_pred EEEeCCCCCCcCC--------CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 215 TWIRPDNDGKFGP--------DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHV 270 (471)
Q Consensus 215 ~W~~~~~~~~~~~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V 270 (471)
.| ++..+.... ....+...+.|.|.....+| |.|+|.+.|..+.......+.+
T Consensus 189 ~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~ 249 (256)
T 3sob_H 189 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 249 (256)
T ss_dssp EE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEecc
Confidence 99 444422110 00111223468899999899 9999999998766555554443
No 394
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.52 E-value=4e-14 Score=107.89 Aligned_cols=93 Identities=25% Similarity=0.405 Sum_probs=76.3
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeee--ceEEEeccCCCCCeEEEEEEEc
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQEL--GVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
+|.+... +.+..+.+|+.++|.|.+ .+.|.+.++|+|++..+....++.+..++ ..|.|.+++.+|+|.|+|.|.|
T Consensus 13 pP~f~~~-p~~~~v~~G~~~~l~C~~-~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 13 PPCFLRF-PRPVRVVSGAEAELKCVV-LGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEEEC-CCCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeC-CCcEEEeCCCcEEEEEEE-EEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 3444433 456788999999999999 78999999999999887777766665433 3699999999999999999999
Q ss_pred CCCceEEEEEEEEEeCC
Q psy17058 258 SAGKEVMNAYIHVLTLP 274 (471)
Q Consensus 258 ~~~~~~~~~~l~V~~~p 274 (471)
..|..+.++.|.|..+|
T Consensus 91 ~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCEEEEEEEEEEEcCC
Confidence 99999889999998765
No 395
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.52 E-value=4.3e-13 Score=111.83 Aligned_cols=154 Identities=16% Similarity=0.218 Sum_probs=106.4
Q ss_pred eeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCce-EE-eeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 191 QTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVE-VY-QELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYI 268 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~-~~-~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 268 (471)
..+.+|+++.|.|.+ ....+..+.|.-. +..... .. .....|.|.+++. | |.|.|.+..........+.|
T Consensus 9 ~~V~~G~Sv~l~Cs~-~c~~p~~~~~~t~-----l~~~~~~~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~~l 80 (185)
T 1iam_A 9 VILPRGGSVLVTCST-SCDQPKLLGIETP-----LPKKELLLPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQSTAKTFL 80 (185)
T ss_dssp EEEETTEEEEEEEEE-CSSSCSEEEEECS-----SCEEEECSSSSSEEEEEEEEECS-C-BCCEEEEECSSCEEEEECEE
T ss_pred cEEeCCCCEEEEEEc-cCCCCccceEEee-----CCCccEeccCCceeEEEEEecCc-C-CEEEEEEECCCCceEEEEEE
Confidence 468899999999999 4333334777531 111100 00 1124588999974 3 99999997766677888999
Q ss_pred EEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCCC--eEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEE
Q psy17058 269 HVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP--TVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKC 345 (471)
Q Consensus 269 ~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~--~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 345 (471)
.|+.+|...........+.+|+.++|.|.+.| .|.+ .|+|+++++.+..... .....+.+|++.....+|...|+|
T Consensus 81 ~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~-~~~~~~~tl~~~~~reD~g~~~sC 159 (185)
T 1iam_A 81 TVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPA-VGEPAEVTTTVLVRRDHHGAQFSC 159 (185)
T ss_dssp EEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEEC-CTTTEEEEEEEECCSSCSSCEEEE
T ss_pred EEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccC-CCccccEEEEEeceeccCCCeEEE
Confidence 99988775444333346899999999999998 5554 5899999988754321 112334567777666666669999
Q ss_pred EEEcCCCc
Q psy17058 346 IGKNSAGT 353 (471)
Q Consensus 346 ~a~n~~g~ 353 (471)
+|.|..+.
T Consensus 160 ~A~~~l~~ 167 (185)
T 1iam_A 160 RTELDLRP 167 (185)
T ss_dssp EEEEECGG
T ss_pred EEEecCcc
Confidence 99998763
No 396
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.52 E-value=6.4e-14 Score=125.83 Aligned_cols=168 Identities=14% Similarity=0.260 Sum_probs=102.5
Q ss_pred CCceeecCCCcEEEEee-CCC--CCCeEEEEeCCCCCC-------------------CCCcc-------cCcEEEEcCCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SND--PSATIKWSKDNQEQL-------------------PPNMI-------AGETLIINGIT 148 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~~--p~~~v~W~~~~~~~~-------------------~~~~~-------~~~~L~i~~v~ 148 (471)
|..+.+.+|++|+|.|. .+. ....+.|||...... ..+.. ...+|+|.+++
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 86 (263)
T 3iu4_H 7 SGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQ 86 (263)
T ss_dssp ECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCC
Confidence 44678999999999999 432 356899998522111 01111 22359999999
Q ss_pred CCCCeEEEEEEEecCC-------ceeeeeEEEEEe--eccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEe
Q psy17058 149 KADEGVYICSIQNAQG-------NVFQDYASIQVD--KREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIR 218 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~-------~~~~~~~~l~v~--~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~ 218 (471)
.+|+|.|.|.+.+..+ ........+.|. ...+|.+....... .+..|+.++|.|.+....|. +.++|
T Consensus 87 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~-~~~~g~~~~L~C~~~~~~P~~~~v~W-- 163 (263)
T 3iu4_H 87 TDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSS-KGSTSGTAALGCLVKDYFPEPVTVSW-- 163 (263)
T ss_dssp GGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCC-CC----EEEEEEEEEEEBSSCCEEEE--
T ss_pred HHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCcc-ccccCCcEEEEEEEEeEeCCceEEEE--
Confidence 9999999999987531 012233455654 23445555333322 34589999999999655664 78999
Q ss_pred CCCCCCcCC--------CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEE
Q psy17058 219 PDNDGKFGP--------DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIH 269 (471)
Q Consensus 219 ~~~~~~~~~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~ 269 (471)
++..+.... ....+...+.|.|.....+| |.|+|.+.|..+.......+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 221 (263)
T 3iu4_H 164 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 221 (263)
T ss_dssp GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECC
T ss_pred CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEc
Confidence 444322110 00111123468888888888 999999999876655444443
No 397
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.52 E-value=2.8e-14 Score=109.41 Aligned_cols=100 Identities=22% Similarity=0.313 Sum_probs=69.6
Q ss_pred EEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEE
Q psy17058 266 AYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKC 345 (471)
Q Consensus 266 ~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 345 (471)
+.|.+..+|.+...+ ....+.+|+++.|.|.+.|.|.+.+.|++++..+..............|.|.+++.+|+|.|+|
T Consensus 3 ~~v~~~~~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 81 (108)
T 3kvq_A 3 LTVLERVAPTITGNL-ENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTC 81 (108)
T ss_dssp --------CCCBSCC-CCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEE
T ss_pred eeECccCCCceecCC-CCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEE
Confidence 456666778776655 4578899999999999999999999999999887654333334456789999999999999999
Q ss_pred EEEcCCCceEEEEEEEEecCC
Q psy17058 346 IGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 346 ~a~n~~g~~~~~~~l~V~~~p 366 (471)
.|.|..|.....+.|.|..+|
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~ 102 (108)
T 3kvq_A 82 QACSVLGCAKVEAFFIIEGAQ 102 (108)
T ss_dssp EEC----CEEEEEEEEEEC--
T ss_pred EEEeCCCceEEEEEEEEeCCC
Confidence 999999999999999998865
No 398
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.51 E-value=9.6e-14 Score=131.68 Aligned_cols=167 Identities=13% Similarity=0.188 Sum_probs=109.5
Q ss_pred CcEEEc-CCcee-ecCCCcEEEEee-CCC---CC-CeEEEEeCCCCCCCCC------cc-----cCcEEEEcCCCCCCCe
Q psy17058 92 NEVQVT-PRQQS-APEGSQVTIECK-SND---PS-ATIKWSKDNQEQLPPN------MI-----AGETLIINGITKADEG 153 (471)
Q Consensus 92 ~~v~~~-p~~~~-v~~G~~v~l~C~-~~~---p~-~~v~W~~~~~~~~~~~------~~-----~~~~L~i~~v~~~D~G 153 (471)
|.+.+. |.... +.+|++++|.|. .+. |. ..|.|+++++...... .. ....|.|..++.+|+|
T Consensus 167 p~v~~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g 246 (376)
T 2aty_A 167 SSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGK 246 (376)
T ss_pred cEEEEeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCC
Confidence 344343 43344 889999999999 554 32 4799999954321110 00 2347999999999999
Q ss_pred EEEEEEEecCCceeeeeEEEEE--eeccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeEEEEeCCCCCCcCCCce
Q psy17058 154 VYICSIQNAQGNVFQDYASIQV--DKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQTWIRPDNDGKFGPDVE 230 (471)
Q Consensus 154 ~Y~C~~~~~~~~~~~~~~~l~v--~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v~W~~~~~~~~~~~~~~ 230 (471)
.|+|.+.+..+. ......+.+ .+..+|.+.+.+... ....|+.++|.|.+....| .+.|+|+|++..+.......
T Consensus 247 ~Y~C~~~~~~~~-~~~~~~v~~~~~~~~~P~v~v~~~~~-~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~ 324 (376)
T 2aty_A 247 EFKCRVNSAAFP-APIEKTISKTKGRPKAPQLYTIPPPK-EQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQ 324 (376)
T ss_pred EEEEEEecCCCC-CceEEEEcCCCCCCcCCeEEeeCCCH-HHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCC
Confidence 999999987654 222233332 445677777665543 3346899999999954455 56999999987643211111
Q ss_pred E-------EeeeceEEEeccCCCCCeEEEEEEEcCCC
Q psy17058 231 V-------YQELGVLRFNNIATGDEGKYTCIAENSAG 260 (471)
Q Consensus 231 ~-------~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 260 (471)
. +...+.|.|.....+|.|.|+|.|.|...
T Consensus 325 ~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 325 PIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred ceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 0 11134577777777889999999998754
No 399
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.51 E-value=1.4e-13 Score=118.87 Aligned_cols=161 Identities=14% Similarity=0.172 Sum_probs=99.5
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCC--CC----------cCCCceEEee-----eceEEEeccCCCCCeE
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDND--GK----------FGPDVEVYQE-----LGVLRFNNIATGDEGK 250 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~--~~----------~~~~~~~~~~-----~~~l~i~~~~~~d~G~ 250 (471)
+....+.+|++++|.|.+. +.+ ..+.|+|.... .. ...++.+..+ ...|.|.+++.+|+|.
T Consensus 8 p~~v~v~~G~~v~L~C~~~-~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~ 85 (207)
T 1ypz_E 8 PSALSLHEGTDSALRCNFT-TTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGT 85 (207)
T ss_dssp CSEEEEETTCCEEEEEEES-SCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEE
T ss_pred CCeEEEccCCcEEEEEEEe-CCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEE
Confidence 3456788999999999984 333 48999986432 11 1234444321 2479999999999999
Q ss_pred EEEEEEcCCC---------c--eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeec-CC-CeEEEEeCCccCCC
Q psy17058 251 YTCIAENSAG---------K--EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGR-PM-PTVSWVKYIAPFDR 317 (471)
Q Consensus 251 Y~C~~~~~~~---------~--~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~i~W~~~~~~~~~ 317 (471)
|.|.+.+..+ . ......|.|.........| .+.+..+ .+.|.|.+.+. |. +.+.|+++ ..+..
T Consensus 86 Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P--~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~~ 161 (207)
T 1ypz_E 86 YFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKP--SVFIMKN-GTNVACLVKDFYPKEVTISLRSS-KKIVE 161 (207)
T ss_dssp EEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCC--EEEEEEE-TTEEEEEEEEESSSCCEEEEECS-SEEEE
T ss_pred EEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCC--eEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-CcccC
Confidence 9999987632 1 1123567776432111111 2222222 37999999985 54 69999998 65542
Q ss_pred cccccccCceeEEEEeecC-CCCCeEEEEEEEcCCCce
Q psy17058 318 NLERDELTSRAVYTIASVR-ESDAGQYKCIGKNSAGTE 354 (471)
Q Consensus 318 ~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~a~n~~g~~ 354 (471)
..........+.+.+.... .+|.|.|+|.|.|..+..
T Consensus 162 ~~~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 162 FDPAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp CCCEEEECTTSSEEEEECEEESSTTTCEEEEEETTEEE
T ss_pred CccceEEcCCCcEEEEEeecccCCCcEEEEEEECCccE
Confidence 2111111222344444444 367899999999987643
No 400
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=8.6e-14 Score=108.54 Aligned_cols=95 Identities=22% Similarity=0.352 Sum_probs=76.9
Q ss_pred eCCceeeC--CCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCC-cccccccCceeEEEEeecCCCCCeEEEEEEE
Q psy17058 272 TLPAVTIT--PSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDR-NLERDELTSRAVYTIASVRESDAGQYKCIGK 348 (471)
Q Consensus 272 ~~p~~~~~--~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 348 (471)
.+|.+.+. ......+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ............|.|.+++.+|+|.|+|.|.
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 99 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQ 99 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEEEE
Confidence 35555432 33456889999999999999999999999999988862 2222233456779999999999999999999
Q ss_pred cCCCceEEEEEEEEecCC
Q psy17058 349 NSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 349 n~~g~~~~~~~l~V~~~p 366 (471)
|..|..+..+.|.|.++|
T Consensus 100 N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 100 IENMKDTATIRIRVVEKA 117 (118)
T ss_dssp CSSCEECCEEEEEEECCC
T ss_pred eCCCeEEEEEEEEEEcCC
Confidence 999999999999998765
No 401
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.50 E-value=3.4e-14 Score=106.95 Aligned_cols=86 Identities=24% Similarity=0.438 Sum_probs=70.6
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc---------cCcEEEEcCCCCCCCeEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI---------AGETLIINGITKADEGVYICS 158 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~---------~~~~L~i~~v~~~D~G~Y~C~ 158 (471)
..||.|...|.++.+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ...+|.|.+++.+|+|.|+|.
T Consensus 3 ~~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~-g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 81 (100)
T 3knb_A 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCG-GRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp CEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEET-TEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEEC-ceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEE
Confidence 34788888889999999999999999 8899999999999 655543221 335899999999999999999
Q ss_pred EEecCCceeeeeEEEEEe
Q psy17058 159 IQNAQGNVFQDYASIQVD 176 (471)
Q Consensus 159 ~~~~~~~~~~~~~~l~v~ 176 (471)
|.|..|. ....+.|.|.
T Consensus 82 a~N~~G~-~~~~~~l~V~ 98 (100)
T 3knb_A 82 LGNEFGS-DSATVNIHIR 98 (100)
T ss_dssp EEETTEE-EEEEEEEEEE
T ss_pred EEECCCE-EEEEEEEEEE
Confidence 9999887 6666666664
No 402
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=3e-13 Score=104.74 Aligned_cols=94 Identities=22% Similarity=0.377 Sum_probs=76.8
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc--cccccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL--ERDELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
+|.+.. ......+.+|+.+.|.|.+.|.|.+.+.|++++..+.... ..........|.|.+++.+|+|.|+|.|.|.
T Consensus 7 pp~i~~-~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 7 GPQIIQ-FPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCEESC-CCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCEEEe-CCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 444443 3456789999999999999999999999999998876432 2222334678999999999999999999999
Q ss_pred CCceEEEEEEEEecCCC
Q psy17058 351 AGTEEKVITVAVEHRPE 367 (471)
Q Consensus 351 ~g~~~~~~~l~V~~~p~ 367 (471)
.|..+..+.|.|...|.
T Consensus 86 ~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 86 LGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp SCEEECCEEEEEECSCS
T ss_pred CCcEEEEEEEEEECCCC
Confidence 99999999999998763
No 403
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.50 E-value=3.2e-12 Score=118.80 Aligned_cols=173 Identities=17% Similarity=0.248 Sum_probs=110.5
Q ss_pred CCCceeEEcCCeEEEEEEccCCC-------------CCCeEEEEeCCCC-------------C---CcCCC-ce------
Q psy17058 187 PNASQTFIVGDRADIQCVLEAGE-------------PSPTQTWIRPDND-------------G---KFGPD-VE------ 230 (471)
Q Consensus 187 ~~~~~~v~~g~~~~L~C~~~~~~-------------p~~~v~W~~~~~~-------------~---~~~~~-~~------ 230 (471)
+.....+..|++++|.|...... ....+.||+.... . ....+ ..
T Consensus 164 q~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~ 243 (401)
T 3f8u_B 164 HTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDD 243 (401)
T ss_dssp SCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESC
T ss_pred CCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecc
Confidence 34456788999999999873221 1347999864211 0 00011 11
Q ss_pred -----EEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEEeCCceeeCCCccEEecCCC-cEEEEEEEee-cCC
Q psy17058 231 -----VYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVLTLPAVTITPSEYVSVRPGE-PLTLECEATG-RPM 303 (471)
Q Consensus 231 -----~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~g~-~v~l~C~~~g-~p~ 303 (471)
+...+..|.|.+++.+|+|.|.|.+.+..+.....+.|.|..+|.+.+.+.....+..|+ .+.|.|.+.| +|.
T Consensus 244 ~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~ 323 (401)
T 3f8u_B 244 DEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYPS 323 (401)
T ss_dssp CCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBSS
T ss_pred cccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCcCC
Confidence 122356899999999999999999998877777788899999998877654322245676 8999999998 566
Q ss_pred --CeEEEE-eCCcc---CCCc-------cc---ccccCceeEEEEeecCC-CCCeEEEEEEEcCC---CceEEEEE
Q psy17058 304 --PTVSWV-KYIAP---FDRN-------LE---RDELTSRAVYTIASVRE-SDAGQYKCIGKNSA---GTEEKVIT 359 (471)
Q Consensus 304 --~~i~W~-~~~~~---~~~~-------~~---~~~~~~~~~l~i~~~~~-~d~G~Y~C~a~n~~---g~~~~~~~ 359 (471)
+.+.|. +++.. +... .. .......+.|.+...+. ++.+.|+|.+.|.. +..+.+++
T Consensus 324 ~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~sL~~g~rs~sVt 399 (401)
T 3f8u_B 324 GGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSLPASGRSAEVT 399 (401)
T ss_dssp TTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTTSCTTCEEEEEE
T ss_pred CCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCCCCCCcceEEEE
Confidence 689995 76521 1100 00 00112233455554432 34459999999986 44444444
No 404
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=3.7e-14 Score=110.68 Aligned_cols=93 Identities=25% Similarity=0.390 Sum_probs=75.9
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCC
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAG 352 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 352 (471)
+|.+...+ ....+.+|+++.|.|.+.|+|.+.+.|++++..+............++|.|.+++.+|+|.|+|.|.|..|
T Consensus 8 pP~i~~~p-~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (118)
T 2eo9_A 8 PPVIRQGP-VNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSG 86 (118)
T ss_dssp SCCCSBCC-CCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSC
T ss_pred CCEEEcCC-CCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCC
Confidence 45554444 45788999999999999999999999999998876432222233456899999999999999999999999
Q ss_pred ceEEEEEEEEecCC
Q psy17058 353 TEEKVITVAVEHRP 366 (471)
Q Consensus 353 ~~~~~~~l~V~~~p 366 (471)
.....+.|.|...+
T Consensus 87 ~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 87 EATWSAYIEVQEFG 100 (118)
T ss_dssp EEEEECCEEEECCS
T ss_pred cEEEEEEEEEEeCC
Confidence 99999999998765
No 405
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.49 E-value=2.3e-13 Score=117.56 Aligned_cols=160 Identities=19% Similarity=0.311 Sum_probs=98.1
Q ss_pred EEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCC-CC------------CCCcc--------cCcEEEEcCCCCCC
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQE-QL------------PPNMI--------AGETLIINGITKAD 151 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~-~~------------~~~~~--------~~~~L~i~~v~~~D 151 (471)
+...|..+.+.+|++++|.|. .+.. ..+.|+|.... .. ..+.. ....|+|.+++.+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D 82 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLED 82 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHH
Confidence 556677889999999999999 4433 47999996321 11 11111 12489999999999
Q ss_pred CeEEEEEEEecCC---------c-eeeeeEEEEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCC
Q psy17058 152 EGVYICSIQNAQG---------N-VFQDYASIQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPD 220 (471)
Q Consensus 152 ~G~Y~C~~~~~~~---------~-~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~ 220 (471)
+|.|.|.+.+..+ . .......|.|.....+ . .++ ...+..+ .++|.|.+....|. +.++|+++
T Consensus 83 ~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~--~-~~P-~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~- 156 (207)
T 1ypz_E 83 SGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQP--P-AKP-SVFIMKN-GTNVACLVKDFYPKEVTISLRSS- 156 (207)
T ss_dssp CEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCC--C-CCC-EEEEEEE-TTEEEEEEEEESSSCCEEEEECS-
T ss_pred CEEEEEEEecCCcccccccccceeeecCccEEEEccCCCC--C-CCC-eEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-
Confidence 9999999987632 1 1123355666531100 0 011 1122222 37999999555665 79999998
Q ss_pred CCCCcCCCceEEeeeceEEEeccCC-CCCeEEEEEEEcCCC
Q psy17058 221 NDGKFGPDVEVYQELGVLRFNNIAT-GDEGKYTCIAENSAG 260 (471)
Q Consensus 221 ~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~~ 260 (471)
..+...........++.+.+..... .|.|.|+|.+.|..+
T Consensus 157 ~~l~~~~~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~ 197 (207)
T 1ypz_E 157 KKIVEFDPAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSE 197 (207)
T ss_dssp SEEEECCCEEEECTTSSEEEEECEEESSTTTCEEEEEETTE
T ss_pred CcccCCccceEEcCCCcEEEEEeecccCCCcEEEEEEECCc
Confidence 5433221111112234555544444 678999999998764
No 406
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.49 E-value=9.4e-13 Score=136.34 Aligned_cols=160 Identities=16% Similarity=0.270 Sum_probs=113.1
Q ss_pred CCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEecc-CCCCCeEEEEEEEcCCCceEEEEEEEEE---
Q psy17058 196 GDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNI-ATGDEGKYTCIAENSAGKEVMNAYIHVL--- 271 (471)
Q Consensus 196 g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~Y~C~~~~~~~~~~~~~~l~V~--- 271 (471)
+..+.|.|.+ .+.|.+.+.|.++|..+.... ...+.|..+ .....+.|.|.+.+..|..... .+.+.
T Consensus 91 ~g~l~v~c~~-~g~P~p~i~W~k~g~~~~~~~-------~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~~~~~~ 161 (731)
T 2v5y_A 91 PGLLNVYVKV-NNGPLGNPIWNISGDPTRTWN-------RAELAISTFWPNFYQVIFEVITSGHQGYLAID-EVKVLGHP 161 (731)
T ss_dssp SEEEEEEEEE-TTCCCCSEEEEECCCCCSSCE-------EEEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBEEESSC
T ss_pred cceEEEEEec-CCCCccceeEEEeCCcCCcee-------EEEEEEeecCCCceEEEEEEEecCCceEEEEe-eEEeeecc
Confidence 4589999999 788999999999998742211 234555544 2233478888777766653321 12222
Q ss_pred --eCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEE-EE--eCCccCCCccc--ccccCceeEEEEeecCCCCCeEEE
Q psy17058 272 --TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVS-WV--KYIAPFDRNLE--RDELTSRAVYTIASVRESDAGQYK 344 (471)
Q Consensus 272 --~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~-W~--~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~G~Y~ 344 (471)
.+|.+. .+ .+..+.+|+++.|.|.+.|.|.|.+. |+ +++..+..... .......++|.|.++...|+|.|+
T Consensus 162 ~~~~p~~~-~~-~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~ 239 (731)
T 2v5y_A 162 CTRTPHFL-RI-QNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYR 239 (731)
T ss_dssp CSSSCEEC-CC-CCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEE
T ss_pred cccccccc-cc-cceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEE
Confidence 244443 33 35789999999999999999999887 88 67766543211 111223579999999999999999
Q ss_pred EEEEcCCCc-eEEEEEEEEecCC
Q psy17058 345 CIGKNSAGT-EEKVITVAVEHRP 366 (471)
Q Consensus 345 C~a~n~~g~-~~~~~~l~V~~~p 366 (471)
|.|.|..|. .+..+.|.|..+|
T Consensus 240 c~A~n~~G~~~s~~~~l~V~~~P 262 (731)
T 2v5y_A 240 CMIRTEGGVGISNYAELVVKEPP 262 (731)
T ss_dssp EEEEETTEEEECCCEEEEEECCC
T ss_pred EEEECCCCCcceeeEEEEEecCC
Confidence 999999998 6667888888765
No 407
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.49 E-value=1.6e-13 Score=120.37 Aligned_cols=164 Identities=17% Similarity=0.276 Sum_probs=102.3
Q ss_pred CCceeecCCCcEEEEee-CC--CCCCeEEEEeCCCCCC--------------------CCCcc-------cCcEEEEcCC
Q psy17058 98 PRQQSAPEGSQVTIECK-SN--DPSATIKWSKDNQEQL--------------------PPNMI-------AGETLIINGI 147 (471)
Q Consensus 98 p~~~~v~~G~~v~l~C~-~~--~p~~~v~W~~~~~~~~--------------------~~~~~-------~~~~L~i~~v 147 (471)
|..+.+.+|++|+|.|. .+ .+...+.||+...... ..+.. ...+|+|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (226)
T 3mlr_H 7 SGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTL 86 (226)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSC
T ss_pred CCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCC
Confidence 44688999999999999 43 2356899998521110 01111 2245999999
Q ss_pred CCCCCeEEEEEEEecCC--------ceeeeeEEEEEee--ccCCeeeecCCCceeEEcCCeEEEEEEccCCCC-CCeEEE
Q psy17058 148 TKADEGVYICSIQNAQG--------NVFQDYASIQVDK--REMPRIRIHPNASQTFIVGDRADIQCVLEAGEP-SPTQTW 216 (471)
Q Consensus 148 ~~~D~G~Y~C~~~~~~~--------~~~~~~~~l~v~~--~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p-~~~v~W 216 (471)
+.+|+|.|.|.+.+..+ ........+.|.. ..+|.+...++ ...+.+|+.++|.|.+....| .+.+.|
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~v~W 165 (226)
T 3mlr_H 87 QASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSW 165 (226)
T ss_dssp CGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEE-EECSTTSSEEEEEEEEEEEBSSCCEEEE
T ss_pred CcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecC-cccccCCCCEEEEEEEEEEECCCeEEEE
Confidence 99999999999976421 0012233455532 33455543222 112347999999999965556 568999
Q ss_pred EeCCCCCCcCC--------CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEE
Q psy17058 217 IRPDNDGKFGP--------DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMN 265 (471)
Q Consensus 217 ~~~~~~~~~~~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 265 (471)
++..+.... ....+...+.|.|......| |.|+|.+.|..+.....
T Consensus 166 --~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 219 (226)
T 3mlr_H 166 --NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 219 (226)
T ss_dssp --GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEE
T ss_pred --CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeE
Confidence 443322110 00111123468899998889 99999999987654433
No 408
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.48 E-value=1.2e-13 Score=116.01 Aligned_cols=165 Identities=14% Similarity=0.155 Sum_probs=104.7
Q ss_pred CCcEEEcCCceeecCCCcEEEEeeCCCCCC-eEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCceeee
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECKSNDPSA-TIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNVFQD 169 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~~~~p~~-~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~ 169 (471)
+..+.+.|+...|.+|+++.|.|..+-+.+ .+.|.-.-+............+.|.+++ +|.+.|.|.+...... ...
T Consensus 2 ~f~v~v~P~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~g~~~~~~~ls~vs-~d~~~~~C~~~c~~~~-~~~ 79 (196)
T 3bn3_B 2 PFWADLQPRVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQLVDIR-EPETQPVCFFRCARRT-LQA 79 (196)
T ss_dssp CSCEEEESSEEEEETTEEEEEEEEECCSSCSEEEEECSSEEEEEEEETTEEEEEEEEEC-SSEECCEEEEEETTEE-EEE
T ss_pred CcEEEEcCCCcEEcCCCeEEEEEeCCCCCCCccEEEEccCCeeEccccCceEEEEEEEc-cCCCceEEEEECCCCc-eEE
Confidence 457888999999999999999999333334 6777443111111111122358999999 8888899997664322 444
Q ss_pred eEEEEEeeccCCe-eeecCCCceeEEcCCeEEEEEEccCCCCCCe--EEEEeCCCCCCcCC----CceEEeeeceEEEec
Q psy17058 170 YASIQVDKREMPR-IRIHPNASQTFIVGDRADIQCVLEAGEPSPT--QTWIRPDNDGKFGP----DVEVYQELGVLRFNN 242 (471)
Q Consensus 170 ~~~l~v~~~~~p~-~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~--v~W~~~~~~~~~~~----~~~~~~~~~~l~i~~ 242 (471)
...|.|. .+|. +.+.+. ...+.+|+.++|.|.+.++.|... ++|+|++..+.... ..........+.+..
T Consensus 80 ~v~l~Vy--~~P~~v~i~~~-~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~~~~~~~~t~~~~~~~ 156 (196)
T 3bn3_B 80 RGLIRTF--QRPDRVELMPL-PPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLA 156 (196)
T ss_dssp ECEEEEE--BCCCCCEECCC-CSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTSCTTCCCEEEEEEEEC
T ss_pred EEEEEEe--cCCCcCEEccC-CccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccccccccccceeEEEEEee
Confidence 4445554 4444 333333 224789999999999977777754 89999887643211 001111124466665
Q ss_pred cCCCCCeEEEEEEEcCCC
Q psy17058 243 IATGDEGKYTCIAENSAG 260 (471)
Q Consensus 243 ~~~~d~G~Y~C~~~~~~~ 260 (471)
...+|...|+|+|.+..+
T Consensus 157 ~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 157 RREDHGANFSCRAELDLR 174 (196)
T ss_dssp CGGGTTCEEEEEEEEECG
T ss_pred eeccCCCeEEEEEEccCC
Confidence 555566699999998655
No 409
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=1.3e-13 Score=104.09 Aligned_cols=92 Identities=26% Similarity=0.488 Sum_probs=75.2
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCC
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAG 352 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 352 (471)
+|.+...+ ....+.+|+++.|.|.+.|.|.+.+.|++++..+.............+|.|.+++.+|+|.|+|.|.|..|
T Consensus 8 ~P~i~~~p-~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 86 (100)
T 2edj_A 8 PPIILQGP-ANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSG 86 (100)
T ss_dssp SCEEEECC-CCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSSC
T ss_pred CCEEEeCc-CCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCC
Confidence 45555444 45678899999999999999999999999998776332222334456899999999999999999999999
Q ss_pred ceEEEEEEEEecC
Q psy17058 353 TEEKVITVAVEHR 365 (471)
Q Consensus 353 ~~~~~~~l~V~~~ 365 (471)
..+..+.|.|.++
T Consensus 87 ~~~~~~~l~V~~~ 99 (100)
T 2edj_A 87 ETSWSAVLDVTES 99 (100)
T ss_dssp CCBCCEEEEEESC
T ss_pred CEEEEEEEEEecC
Confidence 9999999999875
No 410
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.48 E-value=1.1e-13 Score=124.29 Aligned_cols=169 Identities=15% Similarity=0.199 Sum_probs=103.4
Q ss_pred ceeEEcCCeEEEEEEccCC-CCCCeEEEEeCCCCCC------------------cCCCceEEee----eceEEEeccCCC
Q psy17058 190 SQTFIVGDRADIQCVLEAG-EPSPTQTWIRPDNDGK------------------FGPDVEVYQE----LGVLRFNNIATG 246 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~-~p~~~v~W~~~~~~~~------------------~~~~~~~~~~----~~~l~i~~~~~~ 246 (471)
...+.+|+.++|.|.+... .....+.|||...... ...++.+..+ ...|.|.+++.+
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (263)
T 3iu4_H 9 PGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTD 88 (263)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGG
T ss_pred CEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHH
Confidence 3568899999999998321 1246899997532111 1233433322 224999999999
Q ss_pred CCeEEEEEEEcCCC------c--eEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEee-cCC-CeEEEEeCC
Q psy17058 247 DEGKYTCIAENSAG------K--EVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATG-RPM-PTVSWVKYI 312 (471)
Q Consensus 247 d~G~Y~C~~~~~~~------~--~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~-~~i~W~~~~ 312 (471)
|+|.|.|.+.+... . ......|.|. .+|.+..... ...+..|+.+.|.|.+.+ +|. +.+.| ++
T Consensus 89 DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~-~~~~~~g~~~~L~C~~~~~~P~~~~v~W--~~ 165 (263)
T 3iu4_H 89 DTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAP-SSKGSTSGTAALGCLVKDYFPEPVTVSW--NS 165 (263)
T ss_dssp GCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECC-CCCC----EEEEEEEEEEEBSSCCEEEE--GG
T ss_pred HCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccC-ccccccCCcEEEEEEEEeEeCCceEEEE--CC
Confidence 99999999987531 1 1122356664 2444442222 123457999999999988 443 58999 44
Q ss_pred ccCCCcc--------cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 313 APFDRNL--------ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 313 ~~~~~~~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
..+.... ........+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 222 (263)
T 3iu4_H 166 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 222 (263)
T ss_dssp GTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECCC
T ss_pred cccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEcC
Confidence 4432211 00112234578888888888 9999999999887665555543
No 411
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=4.5e-13 Score=100.77 Aligned_cols=91 Identities=18% Similarity=0.204 Sum_probs=74.0
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccccc---ccCceeEEEEeecCCCCCeEEEEEEEc
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERD---ELTSRAVYTIASVRESDAGQYKCIGKN 349 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~---~~~~~~~l~i~~~~~~d~G~Y~C~a~n 349 (471)
+|.+...+ ....+.+|+++.|.|.+.|.|.+.+.|++++..+....... ......+|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 5 APKIFERI-QSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCceEecC-cceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 34444443 35688999999999999999999999999998876432211 134566899999999999999999999
Q ss_pred CCCceEEEEEEEEec
Q psy17058 350 SAGTEEKVITVAVEH 364 (471)
Q Consensus 350 ~~g~~~~~~~l~V~~ 364 (471)
..|....++.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999999999998865
No 412
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.47 E-value=6.3e-13 Score=119.04 Aligned_cols=170 Identities=15% Similarity=0.196 Sum_probs=106.7
Q ss_pred eeEEcCCeEEEEEEccCC-CCCCeEEEEeCCCCCC-------------------cCCCceEEee----eceEEEeccCCC
Q psy17058 191 QTFIVGDRADIQCVLEAG-EPSPTQTWIRPDNDGK-------------------FGPDVEVYQE----LGVLRFNNIATG 246 (471)
Q Consensus 191 ~~v~~g~~~~L~C~~~~~-~p~~~v~W~~~~~~~~-------------------~~~~~~~~~~----~~~l~i~~~~~~ 246 (471)
..+.+|++++|.|.+... .....+.|+|...... ...++.+..+ ...|.|.+++.+
T Consensus 33 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 112 (256)
T 3sob_H 33 GLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRAE 112 (256)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCcc
Confidence 467899999999998321 2346899998532110 1233433322 224999999999
Q ss_pred CCeEEEEEEEcCCC---------c--eEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEee-cC-CCeEEEE
Q psy17058 247 DEGKYTCIAENSAG---------K--EVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATG-RP-MPTVSWV 309 (471)
Q Consensus 247 d~G~Y~C~~~~~~~---------~--~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p-~~~i~W~ 309 (471)
|+|.|.|.+.+..+ . ......|.|. .+|.+..... ...+.+|+.+.|.|.+.+ .| .+.+.|
T Consensus 113 DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~~~~p~~~~v~W- 190 (256)
T 3sob_H 113 DTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSW- 190 (256)
T ss_dssp GCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECC-C-----TTEEEEEEEEEEEBSSCCEEEE-
T ss_pred cCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECC-CcccccCCcEEEEEEEEEEECCCeEEEE-
Confidence 99999999987431 1 1222355654 2344443222 224568999999999988 55 347999
Q ss_pred eCCccCCCccc--------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEEec
Q psy17058 310 KYIAPFDRNLE--------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAVEH 364 (471)
Q Consensus 310 ~~~~~~~~~~~--------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 364 (471)
++..+..... .......+.|.|.....+| |.|+|.|.|..+.......|.+..
T Consensus 191 -~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~~~ 251 (256)
T 3sob_H 191 -NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKS 251 (256)
T ss_dssp -GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC-
T ss_pred -CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEecccC
Confidence 5554432110 0112234578899999999 999999999988877776666553
No 413
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.47 E-value=3.3e-13 Score=101.57 Aligned_cols=91 Identities=23% Similarity=0.402 Sum_probs=73.1
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc---ccccCceeEEEEeecCCCCCeEEEEEEEc
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE---RDELTSRAVYTIASVRESDAGQYKCIGKN 349 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~---~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 349 (471)
+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ........+|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 5 PPTFKVSL-MDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEECC-CCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEEcC-CceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 44454444 346889999999999999999999999999988764322 11223345899999999999999999999
Q ss_pred CCCceEEEEEEEEec
Q psy17058 350 SAGTEEKVITVAVEH 364 (471)
Q Consensus 350 ~~g~~~~~~~l~V~~ 364 (471)
..|..+.++.|.|.+
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999999999998875
No 414
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.46 E-value=1.6e-13 Score=104.20 Aligned_cols=93 Identities=16% Similarity=0.264 Sum_probs=75.6
Q ss_pred eCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--ccccCceeEEEEeecCCCCCeEEEEEEEc
Q psy17058 272 TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDELTSRAVYTIASVRESDAGQYKCIGKN 349 (471)
Q Consensus 272 ~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 349 (471)
.+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++++..+..... ........+|.|.++..+|+|.|+|.|.|
T Consensus 7 ~~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 85 (103)
T 3qp3_A 7 HAPRITLRM-RSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTN 85 (103)
T ss_dssp EEEEEEECC-CCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeCC-cceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEe
Confidence 345555444 456889999999999999999999999999988764322 22233456899999999999999999999
Q ss_pred CCCceEEEEEEEEecC
Q psy17058 350 SAGTEEKVITVAVEHR 365 (471)
Q Consensus 350 ~~g~~~~~~~l~V~~~ 365 (471)
..|..+..+.|.|...
T Consensus 86 ~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 86 YKGEASDYATLDVTGG 101 (103)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCcEEEEEEEEEECC
Confidence 9999999999999764
No 415
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=2e-13 Score=102.77 Aligned_cols=90 Identities=22% Similarity=0.411 Sum_probs=74.0
Q ss_pred eCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCC
Q psy17058 272 TLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSA 351 (471)
Q Consensus 272 ~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 351 (471)
.+|.+...+ ....+.+|+++.|.|.+.|.|.+.+.|++++..+..... ........|.|.+++.+|+|.|+|.|.|..
T Consensus 10 ~~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~ 87 (99)
T 2yr3_A 10 VAPSFSSVL-KDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARS-TCEAGVAELHIQDALPEDHGTYTCLAENAL 87 (99)
T ss_dssp EEEEEEECC-CCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCC-EEETTEEEEEECSCCTTCCBCEEEEEECSS
T ss_pred cCCceeecC-CCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccce-EeeCCeEEEEECCCChhhCEEEEEEEEECC
Confidence 455555554 356889999999999999999999999999988764332 233456789999999999999999999999
Q ss_pred CceEEEEEEEEe
Q psy17058 352 GTEEKVITVAVE 363 (471)
Q Consensus 352 g~~~~~~~l~V~ 363 (471)
|..+.++.|.|+
T Consensus 88 g~~~~~~~l~V~ 99 (99)
T 2yr3_A 88 GQVSCSAWVTVH 99 (99)
T ss_dssp CEEEEECCEEEC
T ss_pred CeEEEEEEEEEC
Confidence 999888888774
No 416
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.46 E-value=7.1e-13 Score=116.30 Aligned_cols=167 Identities=19% Similarity=0.213 Sum_probs=105.1
Q ss_pred ceeEEcCCeEEEEEEccCC-CCCCeEEEEeCCCCC-------------------CcCCCceEEee----eceEEEeccCC
Q psy17058 190 SQTFIVGDRADIQCVLEAG-EPSPTQTWIRPDNDG-------------------KFGPDVEVYQE----LGVLRFNNIAT 245 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~-~p~~~v~W~~~~~~~-------------------~~~~~~~~~~~----~~~l~i~~~~~ 245 (471)
...+.+|+.++|.|.+... .+...+.|||..... ....++.+..+ ...|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (226)
T 3mlr_H 9 GEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQA 88 (226)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCG
T ss_pred CEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCc
Confidence 4568899999999998321 234689999853210 01234444322 23499999999
Q ss_pred CCCeEEEEEEEcCCC-------c--eEEEEEEEEE----eCCceeeCCCccEEecCCCcEEEEEEEee-cC-CCeEEEEe
Q psy17058 246 GDEGKYTCIAENSAG-------K--EVMNAYIHVL----TLPAVTITPSEYVSVRPGEPLTLECEATG-RP-MPTVSWVK 310 (471)
Q Consensus 246 ~d~G~Y~C~~~~~~~-------~--~~~~~~l~V~----~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p-~~~i~W~~ 310 (471)
+|+|.|.|.+.+..+ . ......|.|. .+|.+...+. ...+.+|+.+.|.|.+.+ .| .+.+.|
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~v~W-- 165 (226)
T 3mlr_H 89 SDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSW-- 165 (226)
T ss_dssp GGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEE-EECSTTSSEEEEEEEEEEEBSSCCEEEE--
T ss_pred ccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecC-cccccCCCCEEEEEEEEEEECCCeEEEE--
Confidence 999999999976421 0 0112345553 2344432211 223568999999999988 45 358999
Q ss_pred CCccCCCccc--------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 311 YIAPFDRNLE--------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITV 360 (471)
Q Consensus 311 ~~~~~~~~~~--------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 360 (471)
++..+..... .......+.|.|.....+| |.|+|.|.|..+.......|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~ 222 (226)
T 3mlr_H 166 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 222 (226)
T ss_dssp GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEEC
T ss_pred CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeEEEc
Confidence 4444321110 1112234578999999889 99999999998876655443
No 417
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.45 E-value=1.9e-13 Score=103.03 Aligned_cols=92 Identities=26% Similarity=0.386 Sum_probs=74.0
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc---ccccCceeEEEEeecCCCCCeEEEEEEEc
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE---RDELTSRAVYTIASVRESDAGQYKCIGKN 349 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~---~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 349 (471)
+|.+...+ ....+.+|+++.|.|.+.|.|.+.+.|++++..+..... ........+|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~P~~~~~p-~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 5 PPRFIQVP-ENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEECCCCC-CCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeEEeCC-CCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 45454443 456889999999999999999999999999987754321 11123346899999999999999999999
Q ss_pred CCCceEEEEEEEEecC
Q psy17058 350 SAGTEEKVITVAVEHR 365 (471)
Q Consensus 350 ~~g~~~~~~~l~V~~~ 365 (471)
..|..+.++.|.|..+
T Consensus 84 ~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAK 99 (100)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEec
Confidence 9999999999999764
No 418
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.44 E-value=4.8e-13 Score=103.77 Aligned_cols=93 Identities=27% Similarity=0.417 Sum_probs=75.3
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc-ccc---ccCceeEEEEeecCCCCCeEEEEEEE
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL-ERD---ELTSRAVYTIASVRESDAGQYKCIGK 348 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~-~~~---~~~~~~~l~i~~~~~~d~G~Y~C~a~ 348 (471)
+|.+...+ ....+.+|+++.|.|.+.|.|.+.+.|++++..+.... ... ......+|.|.+++.+|+|.|+|.|.
T Consensus 15 ~p~f~~~p-~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 93 (116)
T 2kkq_A 15 APMFIYKP-QSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAV 93 (116)
T ss_dssp CCCBSSCC-CCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEE
T ss_pred CCeEEeCC-CcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEE
Confidence 45555444 45789999999999999999999999999998876321 111 11133489999999999999999999
Q ss_pred cCCCceEEEEEEEEecCC
Q psy17058 349 NSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 349 n~~g~~~~~~~l~V~~~p 366 (471)
|..|..+..+.|.|..+|
T Consensus 94 N~~G~~~~~~~l~V~~~p 111 (116)
T 2kkq_A 94 NEAGVTTCNTRLDVTARP 111 (116)
T ss_dssp ETTEEEEEEEEEEEECCS
T ss_pred cCCCeEEEEEEEEEeCCC
Confidence 999999999999999876
No 419
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.43 E-value=5.2e-13 Score=102.04 Aligned_cols=93 Identities=26% Similarity=0.360 Sum_probs=74.2
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--ccccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
+|.+...+ ....+.+|+++.|.|.+.|.|.+.+.|++++..+..... .........|.|.+++.+|+|.|+|.|.|.
T Consensus 13 ~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 91 (107)
T 3irg_B 13 PPCFLRFP-RPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCeeEcCC-ccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcC
Confidence 45555444 457889999999999999999999999999988764322 112233448999999999999999999999
Q ss_pred CCceEEEEEEEEecCC
Q psy17058 351 AGTEEKVITVAVEHRP 366 (471)
Q Consensus 351 ~g~~~~~~~l~V~~~p 366 (471)
.|..+..+.|.|..+|
T Consensus 92 ~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 92 AGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TEEEEEEEEEEEEC--
T ss_pred CCcEEEEEEEEEEcCC
Confidence 9999999999998754
No 420
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.43 E-value=4.9e-13 Score=101.27 Aligned_cols=81 Identities=19% Similarity=0.307 Sum_probs=67.4
Q ss_pred ecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccc-------cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEE
Q psy17058 286 VRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLER-------DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVI 358 (471)
Q Consensus 286 ~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~-------~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 358 (471)
...+..+.|.|.+.|+|.|.++|++++..+...... ......+.|.|.+++.+|+|.|+|.|.|..|..+.++
T Consensus 13 ~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~ 92 (103)
T 1wwb_X 13 PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQI 92 (103)
T ss_dssp CCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred ceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEE
Confidence 346888999999999999999999999887644221 0122345699999999999999999999999999999
Q ss_pred EEEEecCC
Q psy17058 359 TVAVEHRP 366 (471)
Q Consensus 359 ~l~V~~~p 366 (471)
.|.|...|
T Consensus 93 ~l~V~~~P 100 (103)
T 1wwb_X 93 SAHFMGWP 100 (103)
T ss_dssp EECCSCCC
T ss_pred EEEECCCC
Confidence 99998876
No 421
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.42 E-value=1.2e-12 Score=98.00 Aligned_cols=86 Identities=14% Similarity=0.221 Sum_probs=71.5
Q ss_pred CCccEEecCCCcEEEEEEEeec-CCCeEEEEeCCccCCCcccc--cccCceeEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy17058 280 PSEYVSVRPGEPLTLECEATGR-PMPTVSWVKYIAPFDRNLER--DELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEK 356 (471)
Q Consensus 280 ~~~~~~~~~g~~v~l~C~~~g~-p~~~i~W~~~~~~~~~~~~~--~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 356 (471)
++....+.+|+++.|.|.+.|. |.+.+.|++++..+...... ........|.|.+++.+|+|.|+|.|.|..|....
T Consensus 7 ~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 86 (97)
T 2bk8_A 7 QIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSS 86 (97)
T ss_dssp CCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred cCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeE
Confidence 3456789999999999999997 88999999999887643221 12334558999999999999999999999999999
Q ss_pred EEEEEEecC
Q psy17058 357 VITVAVEHR 365 (471)
Q Consensus 357 ~~~l~V~~~ 365 (471)
++.|.|.+.
T Consensus 87 ~~~l~V~~~ 95 (97)
T 2bk8_A 87 YAELFVKGV 95 (97)
T ss_dssp EEEEEETTT
T ss_pred EEEEEEEec
Confidence 999998764
No 422
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.42 E-value=1.9e-12 Score=116.63 Aligned_cols=172 Identities=17% Similarity=0.308 Sum_probs=105.8
Q ss_pred cEEEcCCceeecCCCcEEEEee-CC--CCCCeEEEEeCCCCCC--------------------CCCcc-------cCcEE
Q psy17058 93 EVQVTPRQQSAPEGSQVTIECK-SN--DPSATIKWSKDNQEQL--------------------PPNMI-------AGETL 142 (471)
Q Consensus 93 ~v~~~p~~~~v~~G~~v~l~C~-~~--~p~~~v~W~~~~~~~~--------------------~~~~~-------~~~~L 142 (471)
.+... ..+.+.+|++|+|.|. .+ .....+.||+...... ..+.. ...+|
T Consensus 26 ~v~q~-~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 104 (267)
T 3u1s_H 26 QLVQS-GAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYM 104 (267)
T ss_dssp CEEEC-CCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEE
T ss_pred eEEee-CCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEE
Confidence 44443 4678999999999999 33 3457899998622110 01111 23469
Q ss_pred EEcCCCCCCCeEEEEEEEe-------cC------------C-c----eeeeeEEEEEe--eccCCeeeecCCCceeEEcC
Q psy17058 143 IINGITKADEGVYICSIQN-------AQ------------G-N----VFQDYASIQVD--KREMPRIRIHPNASQTFIVG 196 (471)
Q Consensus 143 ~i~~v~~~D~G~Y~C~~~~-------~~------------~-~----~~~~~~~l~v~--~~~~p~~~~~~~~~~~v~~g 196 (471)
+|.+++.+|+|.|.|.+.+ .. . . .......+.|. ...+|.+....+.. ...+|
T Consensus 105 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~-~~~~g 183 (267)
T 3u1s_H 105 ELRGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSS-KSTSG 183 (267)
T ss_dssp EECSCCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCG-GGEET
T ss_pred EECCCChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCc-ccCCC
Confidence 9999999999999999862 00 0 0 01123445553 23345555333322 23579
Q ss_pred CeEEEEEEccCCCC-CCeEEEEeCCCCCCcCC--------CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 197 DRADIQCVLEAGEP-SPTQTWIRPDNDGKFGP--------DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVMNAY 267 (471)
Q Consensus 197 ~~~~L~C~~~~~~p-~~~v~W~~~~~~~~~~~--------~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 267 (471)
+.++|.|.+....| .+.++| ++..+.... ....+...+.|.|.....+| +.|+|.+.|..........
T Consensus 184 ~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~ 260 (267)
T 3u1s_H 184 GTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 260 (267)
T ss_dssp TEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEE
T ss_pred CcEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceEEE
Confidence 99999999955566 578999 554432110 00111223468888888888 9999999997665544444
Q ss_pred EE
Q psy17058 268 IH 269 (471)
Q Consensus 268 l~ 269 (471)
+.
T Consensus 261 ~~ 262 (267)
T 3u1s_H 261 VE 262 (267)
T ss_dssp CC
T ss_pred cc
Confidence 33
No 423
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.42 E-value=5.4e-13 Score=109.33 Aligned_cols=101 Identities=25% Similarity=0.319 Sum_probs=78.9
Q ss_pred EEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccc---cCceeEEEEeecCCCCCeEEE
Q psy17058 268 IHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDE---LTSRAVYTIASVRESDAGQYK 344 (471)
Q Consensus 268 l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~---~~~~~~l~i~~~~~~d~G~Y~ 344 (471)
+.+..+|.+...+. ...+.+|+.+.|.|.+.|.|.+.+.|++++..+........ ......|.|.+++.+|+|.|+
T Consensus 36 ~~v~~~P~~~~~~~-~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 114 (154)
T 1fhg_A 36 EKPHVKPYFTKTIL-DMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYT 114 (154)
T ss_dssp CCCCEEEEEEECCC-CEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEE
T ss_pred ccCCCCCeEEccCC-cEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEE
Confidence 34445666665543 57889999999999999999999999999988764322111 233579999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEecCCCCC
Q psy17058 345 CIGKNSAGTEEKVITVAVEHRPEYG 369 (471)
Q Consensus 345 C~a~n~~g~~~~~~~l~V~~~p~~~ 369 (471)
|.|.|..|.....+.|.|...|...
T Consensus 115 C~a~N~~G~~~~~~~l~V~~~p~~~ 139 (154)
T 1fhg_A 115 CKAVNSLGEATCTAELLVETMGKEG 139 (154)
T ss_dssp EEEEETTEEEEEEEEEEEECC----
T ss_pred EEEEECCCeEEEEEEEEEeCcCcCC
Confidence 9999999999999999999887543
No 424
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=8e-13 Score=102.98 Aligned_cols=91 Identities=22% Similarity=0.360 Sum_probs=73.8
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCC-c----ccCcEEEEcCCCCCCCeEEEEEEEec
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPN-M----IAGETLIINGITKADEGVYICSIQNA 162 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~-~----~~~~~L~i~~v~~~D~G~Y~C~~~~~ 162 (471)
..+|.|...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+... . ..++.|.|.+++.+|+|.|+|.+.|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~-g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 84 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKD-GVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTP 84 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEES-SSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECS
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEEC-CEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcC
Confidence 45788888889999999999999999 8889999999998 5555421 1 15678999999999999999999999
Q ss_pred CCceeeeeEEEEEeeccCC
Q psy17058 163 QGNVFQDYASIQVDKREMP 181 (471)
Q Consensus 163 ~~~~~~~~~~l~v~~~~~p 181 (471)
.|. ....+.|.|.....|
T Consensus 85 ~g~-~~~~~~l~V~~~~~p 102 (118)
T 2eo9_A 85 SGE-ATWSAYIEVQEFGVP 102 (118)
T ss_dssp SCE-EEEECCEEEECCSCC
T ss_pred CCc-EEEEEEEEEEeCCCC
Confidence 887 666666777644333
No 425
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.41 E-value=1.9e-12 Score=113.40 Aligned_cols=156 Identities=16% Similarity=0.291 Sum_probs=97.7
Q ss_pred EEEcCCceeecCCCcEEEEee-CCCC--CCeEEEEeCCC-CCC--------------CCCcc-------cCcEEEEcCCC
Q psy17058 94 VQVTPRQQSAPEGSQVTIECK-SNDP--SATIKWSKDNQ-EQL--------------PPNMI-------AGETLIINGIT 148 (471)
Q Consensus 94 v~~~p~~~~v~~G~~v~l~C~-~~~p--~~~v~W~~~~~-~~~--------------~~~~~-------~~~~L~i~~v~ 148 (471)
+...|..+.+.+|++++|.|. .+.+ ...+.||+... ... ..+.. ....|.|.+++
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 83 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPS 83 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCC
T ss_pred cEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCC
Confidence 555677889999999999999 5333 46799998631 111 11111 22489999999
Q ss_pred CCCCeEEEEEEEecCC------c-eeeeeEEEEEeec----cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCC-eEEE
Q psy17058 149 KADEGVYICSIQNAQG------N-VFQDYASIQVDKR----EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSP-TQTW 216 (471)
Q Consensus 149 ~~D~G~Y~C~~~~~~~------~-~~~~~~~l~v~~~----~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~-~v~W 216 (471)
.+|+|.|.|.+.+... . .......|.|... .+|.+.+ .. ..++|.|.+....|.+ .++|
T Consensus 84 ~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~--------~~-~~~~L~C~~~g~~P~~i~v~W 154 (229)
T 1hxm_A 84 ERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFV--------MK-NGTNVACLVKEFYPKDIRINL 154 (229)
T ss_dssp GGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEE--------EE-ETTEEEEEEESCBSSCCEEEE
T ss_pred HhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEE--------cC-CCCeEEEEEEEEeCCCEEEEE
Confidence 9999999999987531 1 1223345666521 1233222 11 2358999996556664 9999
Q ss_pred EeCCCCCCcCCCceEEeeeceEEEeccCC-CCCeEEEEEEEcCC
Q psy17058 217 IRPDNDGKFGPDVEVYQELGVLRFNNIAT-GDEGKYTCIAENSA 259 (471)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~ 259 (471)
+++ ..+...........++.+.+..... .+.|.|+|.+.|..
T Consensus 155 ~~~-~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~ytC~V~h~~ 197 (229)
T 1hxm_A 155 VSS-KKITEFDPAIVISPSGKYNAVKLGKYEDSNSVTCSVQHDN 197 (229)
T ss_dssp ECS-SEEEECCCEEEECTTSSEEEEEEEEETTTTTCEEEEEETT
T ss_pred ecC-CEEecCccceEECCCCcEEEEECcccCCCCcEEEEEEeCC
Confidence 998 6533221111112244555544433 68899999999875
No 426
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.41 E-value=5.3e-13 Score=99.08 Aligned_cols=84 Identities=18% Similarity=0.372 Sum_probs=67.9
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCC-CCCCCCCcc-----cCcEEEEcCCCCCCCeEEEEEEEecC
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDN-QEQLPPNMI-----AGETLIINGITKADEGVYICSIQNAQ 163 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~-~~~~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~~~~~~ 163 (471)
+|.|...+....+.+|+.+.|.|. .+.|.+.+.|++++ +..+..... ....|.|.+++.+|+|.|+|.|.|..
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~ 81 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNEL 81 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEETT
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcCC
Confidence 567766778889999999999999 89999999999994 155544322 34689999999999999999999998
Q ss_pred CceeeeeEEEEE
Q psy17058 164 GNVFQDYASIQV 175 (471)
Q Consensus 164 ~~~~~~~~~l~v 175 (471)
|. ......|.|
T Consensus 82 G~-~~~~~~l~V 92 (93)
T 1wit_A 82 GE-DEAIFEVIV 92 (93)
T ss_dssp EE-EEEEEEEEE
T ss_pred Ce-EEEEEEEEE
Confidence 86 555555554
No 427
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=1.1e-12 Score=101.61 Aligned_cols=89 Identities=18% Similarity=0.245 Sum_probs=68.2
Q ss_pred eeeCCCccEEecCCCcEEEEEEEeec---CCCeEEEEeCCccC-----CCcccc------cccCceeEEEEeecCCCCCe
Q psy17058 276 VTITPSEYVSVRPGEPLTLECEATGR---PMPTVSWVKYIAPF-----DRNLER------DELTSRAVYTIASVRESDAG 341 (471)
Q Consensus 276 ~~~~~~~~~~~~~g~~v~l~C~~~g~---p~~~i~W~~~~~~~-----~~~~~~------~~~~~~~~l~i~~~~~~d~G 341 (471)
+...| ..+.+.+|++++|.|.+.|. |.|.|.|+|+.... ...... ........|.|.+++.+|+|
T Consensus 10 F~~~P-~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG 88 (126)
T 2dav_A 10 FIEKP-QGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAG 88 (126)
T ss_dssp CCSCC-CCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCE
T ss_pred EEEcC-CCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCE
Confidence 33444 56789999999999999874 88999999964211 011110 11113588999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEecC
Q psy17058 342 QYKCIGKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 342 ~Y~C~a~n~~g~~~~~~~l~V~~~ 365 (471)
.|+|+|.|..|..+.++.|.|...
T Consensus 89 ~Y~Cevsn~~g~~~~~~~L~V~~~ 112 (126)
T 2dav_A 89 NYRCEVTYKDKFDSCSFDLEVHES 112 (126)
T ss_dssp EEEEEEECSSCEEEECCEEEEECC
T ss_pred EEEEEEEeCCCcEEEEEEEEEEec
Confidence 999999999999999999999983
No 428
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.41 E-value=5.6e-12 Score=117.18 Aligned_cols=160 Identities=14% Similarity=0.263 Sum_probs=100.9
Q ss_pred cCCceeecCCCcEEEEee-CCCC--------------CCeEEEEeCC------------CCC-----CC-CC--------
Q psy17058 97 TPRQQSAPEGSQVTIECK-SNDP--------------SATIKWSKDN------------QEQ-----LP-PN-------- 135 (471)
Q Consensus 97 ~p~~~~v~~G~~v~l~C~-~~~p--------------~~~v~W~~~~------------~~~-----~~-~~-------- 135 (471)
++..+.+.+|++++|.|. ...+ ...+.||+.. +.. .. ..
T Consensus 164 q~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~ 243 (401)
T 3f8u_B 164 HTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDD 243 (401)
T ss_dssp SCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESC
T ss_pred CCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecc
Confidence 467889999999999998 3222 3579999751 110 00 00
Q ss_pred ------cccCcEEEEcCCCCCCCeEEEEEEEecCCceeeeeEEEEEeeccCCeeeecCCCceeEEcCC-eEEEEEEccCC
Q psy17058 136 ------MIAGETLIINGITKADEGVYICSIQNAQGNVFQDYASIQVDKREMPRIRIHPNASQTFIVGD-RADIQCVLEAG 208 (471)
Q Consensus 136 ------~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~p~~~~~~~~~~~v~~g~-~~~L~C~~~~~ 208 (471)
...+.+|+|.+++.+|+|.|.|.+.+..+. .. ..+.+.+..+|.+.+.+.....+..|+ .++|.|.+...
T Consensus 244 ~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~-~~--~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~Gf 320 (401)
T 3f8u_B 244 DEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQ-GQ--VTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHF 320 (401)
T ss_dssp CCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEE-EE--EEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEE
T ss_pred cccccccCCcEEEEECcCCHhhCceEEEEEEecccc-ee--EEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCC
Confidence 013568999999999999999999886544 33 344444456788777654332244676 89999999666
Q ss_pred CCC--CeEEEE-eCCCC---CCcCC-----Cce-----EEeeeceEEEeccCC-CCCeEEEEEEEcCC
Q psy17058 209 EPS--PTQTWI-RPDND---GKFGP-----DVE-----VYQELGVLRFNNIAT-GDEGKYTCIAENSA 259 (471)
Q Consensus 209 ~p~--~~v~W~-~~~~~---~~~~~-----~~~-----~~~~~~~l~i~~~~~-~d~G~Y~C~~~~~~ 259 (471)
.|. +.++|+ +++.. +.... ... .+...+.|.+...+. .+.+.|+|.+.|..
T Consensus 321 yP~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 321 YPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp BSSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTT
T ss_pred cCCCCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCC
Confidence 676 799995 77521 11110 000 011123455554432 34569999999875
No 429
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.40 E-value=8.8e-13 Score=100.95 Aligned_cols=101 Identities=22% Similarity=0.381 Sum_probs=69.5
Q ss_pred EEEeeccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeeceEEEeccCCCCCeEEE
Q psy17058 173 IQVDKREMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELGVLRFNNIATGDEGKYT 252 (471)
Q Consensus 173 l~v~~~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 252 (471)
+.|.+..+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+.......+....+.|.|.+++.+|+|.|+
T Consensus 3 ~~v~~~~~P~~~~~~-~~~~v~~G~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 80 (108)
T 3kvq_A 3 LTVLERVAPTITGNL-ENQTTSIGESIEVSCTA-SGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYT 80 (108)
T ss_dssp --------CCCBSCC-CCEEEETTCCEEEECBC-C----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEE
T ss_pred eeECccCCCceecCC-CCeEEeCCCeEEEEEEC-cCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEE
Confidence 344445566665544 45678899999999999 7888899999999988766666666555678999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEEeCCc
Q psy17058 253 CIAENSAGKEVMNAYIHVLTLPA 275 (471)
Q Consensus 253 C~~~~~~~~~~~~~~l~V~~~p~ 275 (471)
|.+.|..|.....+.|.|..+|.
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 81 CQACSVLGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp EEEC----CEEEEEEEEEEC---
T ss_pred EEEEeCCCceEEEEEEEEeCCCc
Confidence 99999999999899999987654
No 430
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=4e-12 Score=98.31 Aligned_cols=98 Identities=18% Similarity=0.207 Sum_probs=79.2
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEee--eceEEEeccCCCCCeEEEEEEEc
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQE--LGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
+|.+.. .+....+.+|+.++|.|.+ .+.|.+.+.|+|++..+....++.+... ...|.|.+++.+|+|.|+|.+.|
T Consensus 7 pp~i~~-~~~~~~v~~G~~v~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 7 GPQIIQ-FPEDQKVRAGESVELFGKV-TGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCEESC-CCCSEEEETTCCEEEEEEE-ESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCEEEe-CCCCeEEeCCCeEEEEEEE-EcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 444443 4456788999999999999 7889999999999988766666555432 45799999999999999999999
Q ss_pred CCCceEEEEEEEEEeCCceeeC
Q psy17058 258 SAGKEVMNAYIHVLTLPAVTIT 279 (471)
Q Consensus 258 ~~~~~~~~~~l~V~~~p~~~~~ 279 (471)
..|.....+.|.|...|.....
T Consensus 85 ~~g~~~~~~~l~V~~~p~~P~~ 106 (114)
T 2cqv_A 85 KLGSRQAQVNLTVVDKPDPPAG 106 (114)
T ss_dssp SSCEEECCEEEEEECSCSCCCC
T ss_pred CCCcEEEEEEEEEECCCCCCCC
Confidence 9998888899999887765433
No 431
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.40 E-value=7.1e-13 Score=102.63 Aligned_cols=80 Identities=15% Similarity=0.248 Sum_probs=67.6
Q ss_pred cCCCcEEEEEEEeecCCCeEEEEeCCccCCCccccc----c-----cCceeEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy17058 287 RPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERD----E-----LTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKV 357 (471)
Q Consensus 287 ~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~----~-----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 357 (471)
..+..+.|.|.+.|+|.|+|+|+|+|..+....... . ....+.|.|.+++..|+|.|+|.|.|..|....+
T Consensus 13 ~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t 92 (126)
T 1he7_A 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 92 (126)
T ss_dssp CCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE
Confidence 467789999999999999999999999987542210 0 1235789999999999999999999999999999
Q ss_pred EEEEEecCC
Q psy17058 358 ITVAVEHRP 366 (471)
Q Consensus 358 ~~l~V~~~p 366 (471)
+.|.|...|
T Consensus 93 ~~l~v~~~P 101 (126)
T 1he7_A 93 IMAAFMDNP 101 (126)
T ss_dssp EEECCCSCT
T ss_pred EEEEEEcCC
Confidence 999998876
No 432
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=8.2e-13 Score=105.41 Aligned_cols=82 Identities=28% Similarity=0.500 Sum_probs=67.0
Q ss_pred ccEEecCCCcEEEEEEEeecCCCeEEEEeCC----------------------------ccCCC---cccccccCceeEE
Q psy17058 282 EYVSVRPGEPLTLECEATGRPMPTVSWVKYI----------------------------APFDR---NLERDELTSRAVY 330 (471)
Q Consensus 282 ~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~----------------------------~~~~~---~~~~~~~~~~~~l 330 (471)
..+.+.+|+++.|.|.+.|.|.|.+.|++++ ..+.. ..........+.|
T Consensus 26 ~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L 105 (139)
T 1gxe_A 26 DTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIF 105 (139)
T ss_dssp CEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEE
T ss_pred CCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEE
Confidence 4568999999999999999999999999998 33311 1111122345689
Q ss_pred EEeecCCCCCeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 331 TIASVRESDAGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 331 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
.|.+++.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 106 ~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 106 TVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp ECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 999999999999999999999999999999885
No 433
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.40 E-value=9.1e-13 Score=99.30 Aligned_cols=80 Identities=26% Similarity=0.477 Sum_probs=67.2
Q ss_pred cEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc---ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 283 YVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE---RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVIT 359 (471)
Q Consensus 283 ~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~---~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 359 (471)
...+.+|+++.|.|.+.|.|.+.+.|++++..+..... ........+|.|.+++.+|+|.|+|.|.|..|....++.
T Consensus 17 ~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 96 (100)
T 3caf_A 17 LHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYH 96 (100)
T ss_dssp EEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEE
Confidence 45788999999999999999999999999988764322 112234468999999999999999999999999988888
Q ss_pred EEE
Q psy17058 360 VAV 362 (471)
Q Consensus 360 l~V 362 (471)
|.|
T Consensus 97 l~V 99 (100)
T 3caf_A 97 LDV 99 (100)
T ss_dssp EEE
T ss_pred EEE
Confidence 877
No 434
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.38 E-value=1.6e-12 Score=102.00 Aligned_cols=88 Identities=25% Similarity=0.380 Sum_probs=68.3
Q ss_pred CCCccEEecCCCcEEEEEEEeec--CCCeEEEEeCCccCCCc------cc----ccccCceeEEEEeecCCCCCeEEEEE
Q psy17058 279 TPSEYVSVRPGEPLTLECEATGR--PMPTVSWVKYIAPFDRN------LE----RDELTSRAVYTIASVRESDAGQYKCI 346 (471)
Q Consensus 279 ~~~~~~~~~~g~~v~l~C~~~g~--p~~~i~W~~~~~~~~~~------~~----~~~~~~~~~l~i~~~~~~d~G~Y~C~ 346 (471)
.+...+.+.+|+++.|.|.+.|. |.+.+.|++++..+... .. .......++|.|.+++.+|+|.|+|.
T Consensus 13 ~p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 92 (122)
T 3s35_X 13 SPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCA 92 (122)
T ss_dssp ESCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEE
T ss_pred cCCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEE
Confidence 34444578889999999999994 45689999998854311 00 00012456899999999999999999
Q ss_pred EEcCCCceEEEEEEEEecCC
Q psy17058 347 GKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 347 a~n~~g~~~~~~~l~V~~~p 366 (471)
|.|..|.....+.|.|..+|
T Consensus 93 a~n~~g~~~~~~~l~V~~~p 112 (122)
T 3s35_X 93 ASSGLMTKKNSTFVRVHEKP 112 (122)
T ss_dssp EECSSCEEEEEEEEEEEEEE
T ss_pred EccCCCceEEEEEEEEeccC
Confidence 99999999999999998764
No 435
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.38 E-value=2.3e-12 Score=96.85 Aligned_cols=91 Identities=24% Similarity=0.345 Sum_probs=72.9
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--ccccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ........+|.|.+++.+|+|.|+|.|.|.
T Consensus 6 ~P~i~~~~-~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 84 (99)
T 3puc_A 6 KPVIVTGL-QDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNS 84 (99)
T ss_dssp EEEEEECC-CCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCEEEecC-ccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeC
Confidence 34444443 356889999999999999999999999999988754322 122234458999999999999999999999
Q ss_pred CCceEEEEEEEEec
Q psy17058 351 AGTEEKVITVAVEH 364 (471)
Q Consensus 351 ~g~~~~~~~l~V~~ 364 (471)
.|..+..+.|.|..
T Consensus 85 ~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 85 AGSVSSSCKLTIKA 98 (99)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCcEeEEEEEEEEe
Confidence 99999999998864
No 436
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.38 E-value=5.2e-12 Score=106.07 Aligned_cols=162 Identities=13% Similarity=0.118 Sum_probs=107.1
Q ss_pred eeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEe-eeceEEEeccCCCCCeEEEEEEEcCCCc
Q psy17058 183 IRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQ-ELGVLRFNNIATGDEGKYTCIAENSAGK 261 (471)
Q Consensus 183 ~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C~~~~~~~~ 261 (471)
+.+.+. ...+.+|+++.|.|.+ ....+..+.|.-. +........ ....+.|.+++ +|++.|.|.+......
T Consensus 5 v~v~P~-~~~V~~G~Sv~l~Cs~-~c~~p~~~~~~t~-----l~~~~~~~g~~~~~~~ls~vs-~d~~~~~C~~~c~~~~ 76 (196)
T 3bn3_B 5 ADLQPR-VAFVERGGSLWLNCST-NCPRPERGGLETS-----LRRNGTQRGLRWLARQLVDIR-EPETQPVCFFRCARRT 76 (196)
T ss_dssp EEEESS-EEEEETTEEEEEEEEE-CCSSCSEEEEECS-----SEEEEEEEETTEEEEEEEEEC-SSEECCEEEEEETTEE
T ss_pred EEEcCC-CcEEcCCCeEEEEEeC-CCCCCCccEEEEc-----cCCeeEccccCceEEEEEEEc-cCCCceEEEEECCCCc
Confidence 334443 3468899999999998 4333336777531 111111111 12248889998 7878799998876666
Q ss_pred eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCCCe--EEEEeCCccCCCcccccc----cCceeEEEEee
Q psy17058 262 EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPMPT--VSWVKYIAPFDRNLERDE----LTSRAVYTIAS 334 (471)
Q Consensus 262 ~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~~--i~W~~~~~~~~~~~~~~~----~~~~~~l~i~~ 334 (471)
....+.|.|+.+|...........+.+|+.++|+|.+.+ .|... |.|+++++.+........ .....++++..
T Consensus 77 ~~~~v~l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~~~~~~~~t~~~~~~~ 156 (196)
T 3bn3_B 77 LQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLA 156 (196)
T ss_dssp EEEECEEEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTSCTTCCCEEEEEEEEC
T ss_pred eEEEEEEEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccccccccccceeEEEEEee
Confidence 788899999987764333222224789999999999987 55544 899999988753321111 11335677776
Q ss_pred cCCCCCeEEEEEEEcCCC
Q psy17058 335 VRESDAGQYKCIGKNSAG 352 (471)
Q Consensus 335 ~~~~d~G~Y~C~a~n~~g 352 (471)
...+|...|+|+|.|..+
T Consensus 157 ~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 157 RREDHGANFSCRAELDLR 174 (196)
T ss_dssp CGGGTTCEEEEEEEEECG
T ss_pred eeccCCCeEEEEEEccCC
Confidence 666666699999998766
No 437
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.38 E-value=1.7e-12 Score=96.68 Aligned_cols=79 Identities=19% Similarity=0.414 Sum_probs=66.6
Q ss_pred CccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 281 SEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITV 360 (471)
Q Consensus 281 ~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 360 (471)
.....+.+|+++.|.|.+.|.| +.+.|++++..+....+. ......|.|.+++.+|+|.|+|.|.|..|..+..+.|
T Consensus 16 ~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 92 (95)
T 2ckn_A 16 VESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRT--RITGEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSV 92 (95)
T ss_dssp BCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSE--EECSSEEEESSCCGGGSEEEEEEEEETTEEEEEEEEE
T ss_pred cceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCE--EEeCCEEEECCCChHHCEEEEEEeccCCCcEEEEEEE
Confidence 3456889999999999999987 799999999887643321 1226789999999999999999999999999888888
Q ss_pred EE
Q psy17058 361 AV 362 (471)
Q Consensus 361 ~V 362 (471)
.|
T Consensus 93 ~V 94 (95)
T 2ckn_A 93 NV 94 (95)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 438
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.38 E-value=3.4e-12 Score=96.03 Aligned_cols=83 Identities=22% Similarity=0.409 Sum_probs=69.3
Q ss_pred ccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCc----ccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEE
Q psy17058 282 EYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRN----LERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKV 357 (471)
Q Consensus 282 ~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~----~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 357 (471)
....+.+|+.+.|.|.+.|.|.+.+.|++++..+... ..........+|.|.+++.+|+|.|+|.|.|..|..+..
T Consensus 13 ~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 92 (100)
T 3irg_A 13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSAT 92 (100)
T ss_dssp SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEEE
Confidence 4568899999999999999999999999999887522 111222345789999999999999999999999999999
Q ss_pred EEEEEec
Q psy17058 358 ITVAVEH 364 (471)
Q Consensus 358 ~~l~V~~ 364 (471)
+.|.|..
T Consensus 93 ~~l~V~~ 99 (100)
T 3irg_A 93 VNIHIRS 99 (100)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9998864
No 439
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=9.7e-13 Score=102.50 Aligned_cols=96 Identities=21% Similarity=0.264 Sum_probs=73.4
Q ss_pred EEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccccccc------CceeEEEEeecCCCCC
Q psy17058 267 YIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDEL------TSRAVYTIASVRESDA 340 (471)
Q Consensus 267 ~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~------~~~~~l~i~~~~~~d~ 340 (471)
.|.|..+|.+..... ....+...|.|.+.|+|.|.+.|+++|..+......... ...+.|.|.+++.+|+
T Consensus 2 ~L~V~~pP~i~~~~~----~~~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 77 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEE----PELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNN 77 (118)
T ss_dssp --CCCCCCCCCCCCC----CCCCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGC
T ss_pred EEEEecCCceeccCC----CeeccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcC
Confidence 466777777654422 122366789999999999999999999887644321111 1467899999999999
Q ss_pred eEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 341 GQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 341 G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
|.|+|.|.|..|..+.++.|.|...|
T Consensus 78 G~Y~C~a~N~~G~~~~~~~l~v~~~P 103 (118)
T 1wwc_A 78 GNYTLIAKNPLGTANQTINGHFLKEP 103 (118)
T ss_dssp EEEEEEEEETTEEEEEEEEECCSCCC
T ss_pred EEEEEEEECCCCeEeeEEEEEEccCC
Confidence 99999999999999999999988876
No 440
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=1.3e-12 Score=98.24 Aligned_cols=85 Identities=21% Similarity=0.340 Sum_probs=69.3
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc----cCcEEEEcCCCCCCCeEEEEEEEecC
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI----AGETLIINGITKADEGVYICSIQNAQ 163 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~~~~~~ 163 (471)
..+|.+...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.+.|..
T Consensus 9 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~ 87 (99)
T 2yr3_A 9 EVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLN-GQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENAL 87 (99)
T ss_dssp CEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEES-SSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEECSS
T ss_pred ccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEEC-CEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEECC
Confidence 45788888899999999999999999 8888899999999 555543222 44689999999999999999999998
Q ss_pred CceeeeeEEEEE
Q psy17058 164 GNVFQDYASIQV 175 (471)
Q Consensus 164 ~~~~~~~~~l~v 175 (471)
|. ....+.|.|
T Consensus 88 g~-~~~~~~l~V 98 (99)
T 2yr3_A 88 GQ-VSCSAWVTV 98 (99)
T ss_dssp CE-EEEECCEEE
T ss_pred Ce-EEEEEEEEE
Confidence 87 555555544
No 441
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.37 E-value=2.3e-12 Score=96.00 Aligned_cols=84 Identities=26% Similarity=0.455 Sum_probs=67.7
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc---cCcEEEEcCCCCCCCeEEEEEEEecCC
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI---AGETLIINGITKADEGVYICSIQNAQG 164 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~~~~~~~ 164 (471)
..+|.+...|....+.+|+++.|.|. .+.| +.+.|+++ +..+..... .++.|.|.+++.+|+|.|+|.+.|..|
T Consensus 7 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~-g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 84 (95)
T 2ckn_A 7 AQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRD-GVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSG 84 (95)
T ss_dssp SCSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBT-TBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTE
T ss_pred CCCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEEC-CEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCC
Confidence 56778877888999999999999999 6667 79999998 655543222 567999999999999999999999887
Q ss_pred ceeeeeEEEEE
Q psy17058 165 NVFQDYASIQV 175 (471)
Q Consensus 165 ~~~~~~~~l~v 175 (471)
. ......|.|
T Consensus 85 ~-~~~~~~l~V 94 (95)
T 2ckn_A 85 S-DTTYFSVNV 94 (95)
T ss_dssp E-EEEEEEEEE
T ss_pred c-EEEEEEEEE
Confidence 6 555555544
No 442
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.37 E-value=3.6e-12 Score=95.56 Aligned_cols=87 Identities=30% Similarity=0.455 Sum_probs=69.0
Q ss_pred CceeeCCCccEEecCCCcEEEEEEEe-ecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCC
Q psy17058 274 PAVTITPSEYVSVRPGEPLTLECEAT-GRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAG 352 (471)
Q Consensus 274 p~~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 352 (471)
+.+.+.+.....+.+|+++.|.|.+. +.|.+.+.|++++....... .....++|.|.+++.+|+|.|+|.|.|..|
T Consensus 10 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (98)
T 1gl4_B 10 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR---AMDFNGILTIRNVQPSDAGTYVCTGSNMFA 86 (98)
T ss_dssp EEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT---EEEETTEEEECSCCGGGCEEEEEEEECSSC
T ss_pred cEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce---eecCCCEEEEeCCChhhCEEEEEEecCCCC
Confidence 33444545566889999999999998 58899999999755432221 123346899999999999999999999999
Q ss_pred ceEEEEEEEEe
Q psy17058 353 TEEKVITVAVE 363 (471)
Q Consensus 353 ~~~~~~~l~V~ 363 (471)
..+.++.|.|.
T Consensus 87 ~~~~~~~l~V~ 97 (98)
T 1gl4_B 87 MDQGTATLHVQ 97 (98)
T ss_dssp EEEEEEEEEEC
T ss_pred ccccEEEEEEe
Confidence 99999888875
No 443
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=6.4e-13 Score=102.11 Aligned_cols=93 Identities=25% Similarity=0.435 Sum_probs=75.9
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc---ccccCceeEEEEeecCCCCCeEEEEEEEc
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE---RDELTSRAVYTIASVRESDAGQYKCIGKN 349 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~---~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 349 (471)
+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ........+|.|.+++.+|+|.|+|.|.|
T Consensus 9 ~P~i~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 87 (110)
T 2dm3_A 9 RPHFLQAP-GDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN 87 (110)
T ss_dssp CCEEEECC-CEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEEC
T ss_pred CCcEEeCC-CcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEEC
Confidence 45555544 457889999999999999999999999999988764321 11123356899999999999999999999
Q ss_pred CCCceEEEEEEEEecCC
Q psy17058 350 SAGTEEKVITVAVEHRP 366 (471)
Q Consensus 350 ~~g~~~~~~~l~V~~~p 366 (471)
..|..+..+.|.|..+|
T Consensus 88 ~~g~~~~~~~l~V~~~p 104 (110)
T 2dm3_A 88 RAGQNSFSLELVVAAKE 104 (110)
T ss_dssp SSCEEEECCEEEEECCC
T ss_pred CCCEEEEEEEEEEeCCC
Confidence 99999999999999876
No 444
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=2e-12 Score=99.31 Aligned_cols=93 Identities=18% Similarity=0.325 Sum_probs=74.9
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc---ccc-cCceeEEEEeecCCCCCeEEEEEEE
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE---RDE-LTSRAVYTIASVRESDAGQYKCIGK 348 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~---~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~ 348 (471)
+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ... ......|.|.+++.+|+|.|+|.|.
T Consensus 8 ~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm2_A 8 APFFEMKL-KHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAA 86 (110)
T ss_dssp CCCBSSCC-CCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEE
T ss_pred CCEEEecC-cCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEE
Confidence 45555444 457889999999999999999999999999988764211 111 1234589999999999999999999
Q ss_pred cCCCceEEEEEEEEecCC
Q psy17058 349 NSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 349 n~~g~~~~~~~l~V~~~p 366 (471)
|..|..+..+.|.|...|
T Consensus 87 N~~g~~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 87 NPQGRISCTGRLMVQAVN 104 (110)
T ss_dssp CTTCCEEECCCEEEECCS
T ss_pred ECCCeEEEEEEEEEECCC
Confidence 999999999999998765
No 445
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=1.8e-12 Score=97.39 Aligned_cols=85 Identities=18% Similarity=0.261 Sum_probs=69.1
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc--------cCcEEEEcCCCCCCCeEEEEEEE
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI--------AGETLIINGITKADEGVYICSIQ 160 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~--------~~~~L~i~~v~~~D~G~Y~C~~~ 160 (471)
.+|.|...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.|.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKN-GVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAI 82 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEEC-CEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEE
Confidence 5788888899999999999999999 8889999999999 555443221 23479999999999999999999
Q ss_pred ecCCceeeeeEEEEEe
Q psy17058 161 NAQGNVFQDYASIQVD 176 (471)
Q Consensus 161 ~~~~~~~~~~~~l~v~ 176 (471)
|..|. ....+.|.|.
T Consensus 83 N~~g~-~~~~~~l~V~ 97 (99)
T 1g1c_A 83 NIAGE-TSSHAFLLVQ 97 (99)
T ss_dssp ETTEE-EEEEEEEEEE
T ss_pred ECCCc-EEEEEEEEEe
Confidence 99887 5555556554
No 446
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.36 E-value=9.1e-13 Score=100.38 Aligned_cols=90 Identities=26% Similarity=0.539 Sum_probs=73.3
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--ccccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
+|.+...+ ....+.+|+++.|.|.+.|.|.+.+.|++++..+..... ........+|.|.+++.+|+|.|+|.|.|.
T Consensus 14 ~~~i~~~p-~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 92 (106)
T 1nct_A 14 AARILTKP-RSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENS 92 (106)
T ss_dssp CCEEEECC-CCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCS
T ss_pred CCEEEECC-CCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeC
Confidence 34454444 457899999999999999999999999999988754322 122334679999999999999999999999
Q ss_pred CCceEEEEEEEEe
Q psy17058 351 AGTEEKVITVAVE 363 (471)
Q Consensus 351 ~g~~~~~~~l~V~ 363 (471)
.|..+.++.|.|.
T Consensus 93 ~G~~~~~~~l~V~ 105 (106)
T 1nct_A 93 EGKQEAEFTLTIQ 105 (106)
T ss_dssp SCBCCEEEEEEEC
T ss_pred CCeEEEEEEEEEE
Confidence 9999999999885
No 447
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=1.8e-12 Score=97.37 Aligned_cols=84 Identities=21% Similarity=0.218 Sum_probs=68.0
Q ss_pred CCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEE
Q psy17058 279 TPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEK 356 (471)
Q Consensus 279 ~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 356 (471)
.+..+..+.+|+++.|.|.+ .|.+.+.|+|+|..+....+ .........|.|.++..+|+|.|+|.|.|. ..+.
T Consensus 12 ~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~ 87 (100)
T 2yuz_A 12 TPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NVTL 87 (100)
T ss_dssp BCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CCCE
T ss_pred ccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--CeeE
Confidence 34456789999999999999 88899999999998864322 222344568999999999999999999998 5567
Q ss_pred EEEEEEecCC
Q psy17058 357 VITVAVEHRP 366 (471)
Q Consensus 357 ~~~l~V~~~p 366 (471)
++.|.|..+|
T Consensus 88 ~a~L~V~~~P 97 (100)
T 2yuz_A 88 PAKVHVISGP 97 (100)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEeCCC
Confidence 7888888776
No 448
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=3.6e-12 Score=95.99 Aligned_cols=93 Identities=31% Similarity=0.525 Sum_probs=73.6
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcC-CCceEEeeeceEEEeccCCCCCeEEEEEEEc
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFG-PDVEVYQELGVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
.+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+... .++.+ ..++.|.|.+++.+|+|.|+|.+.|
T Consensus 7 ~~P~i~~~p-~~~~v~~G~~~~l~C~~-~g~p~p~v~W~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n 83 (100)
T 2edj_A 7 GPPIILQGP-ANQTLAVDGTALLKCKA-TGDPLPVISWLKEGFTFPGRDPRATI-QEQGTLQIKNLRISDTGTYTCVATS 83 (100)
T ss_dssp SSCEEEECC-CCEEEESSSEEEECCEE-ECSSCCEEEEEESSSEESSSCSSCEE-CTTCCEEEESCCTTTCCEEEEEEEC
T ss_pred CCCEEEeCc-CCEEEcCCCcEEEEEEE-EEcCCCEEEEEECCEECCCCCCCEEE-cCCCEEEEccCCcccCEEEEEEEEc
Confidence 345555443 45678899999999999 78899999999998875533 23333 3366899999999999999999999
Q ss_pred CCCceEEEEEEEEEeCC
Q psy17058 258 SAGKEVMNAYIHVLTLP 274 (471)
Q Consensus 258 ~~~~~~~~~~l~V~~~p 274 (471)
..|.....+.|.|..+|
T Consensus 84 ~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 84 SSGETSWSAVLDVTESG 100 (100)
T ss_dssp SSCCCBCCEEEEEESCC
T ss_pred CCCCEEEEEEEEEecCC
Confidence 99988888888887653
No 449
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.35 E-value=5.4e-12 Score=96.45 Aligned_cols=89 Identities=17% Similarity=0.226 Sum_probs=67.1
Q ss_pred CceeeCCCccEEecCCCcEEEEEEEeecCC---CeEEEEeCCccCCC-----cccc------cccCceeEEEEeecCCCC
Q psy17058 274 PAVTITPSEYVSVRPGEPLTLECEATGRPM---PTVSWVKYIAPFDR-----NLER------DELTSRAVYTIASVRESD 339 (471)
Q Consensus 274 p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~---~~i~W~~~~~~~~~-----~~~~------~~~~~~~~l~i~~~~~~d 339 (471)
|.+...| ..+.+.+|++++|.|.+.|.|. +.+.|+|++..... .... ........|.|.+++.+|
T Consensus 5 p~f~~~p-~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 5 GLFVMRP-QDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CSCSBCC-CCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred cEEEeCC-CcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 4444444 4678999999999999999998 89999997622110 0000 011135789999999999
Q ss_pred CeEEEEEEEcCCCceEEEEEEEEe
Q psy17058 340 AGQYKCIGKNSAGTEEKVITVAVE 363 (471)
Q Consensus 340 ~G~Y~C~a~n~~g~~~~~~~l~V~ 363 (471)
+|.|+|.|.|..|..+.++.|.|.
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999999999999885
No 450
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.35 E-value=6.2e-12 Score=92.81 Aligned_cols=83 Identities=18% Similarity=0.372 Sum_probs=67.6
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCceee
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNVFQ 168 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~ 168 (471)
.++.+.+.|....+.+|+++.|.|. .+.|.+.+.|+++ +..+... ....|.|.+++.+|+|.|+|.+.|..+...+
T Consensus 2 ~~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~-~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s 78 (91)
T 3bfo_A 2 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKN-ELPLTHE--TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDS 78 (91)
T ss_dssp CCCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEET-TEECTTC--CSSEEEESSCCGGGCEEEEEEEECSSCEEEC
T ss_pred CceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcC-CeeCCcC--CCCeEEECCCCHHhCEEEEEEEEcCCCCEEe
Confidence 3577888899999999999999999 8889999999999 5554433 3568999999999999999999998886333
Q ss_pred eeEEEEE
Q psy17058 169 DYASIQV 175 (471)
Q Consensus 169 ~~~~l~v 175 (471)
....|.|
T Consensus 79 ~~~~l~V 85 (91)
T 3bfo_A 79 KKVEIII 85 (91)
T ss_dssp CCEEEEE
T ss_pred eeEEEEE
Confidence 3444444
No 451
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.35 E-value=9.6e-12 Score=108.91 Aligned_cols=160 Identities=17% Similarity=0.249 Sum_probs=97.2
Q ss_pred CCceeEEcCCeEEEEEEccCCCC--CCeEEEEeCCC--CCC------------cCCCceEEee----eceEEEeccCCCC
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEP--SPTQTWIRPDN--DGK------------FGPDVEVYQE----LGVLRFNNIATGD 247 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p--~~~v~W~~~~~--~~~------------~~~~~~~~~~----~~~l~i~~~~~~d 247 (471)
+....+.+|++++|.|.+ .+.+ ...+.|+|... ... ...++.+..+ ...|.|.+++.+|
T Consensus 8 p~~v~v~~G~~vtL~C~~-s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 86 (229)
T 1hxm_A 8 HQTVPVSIGVPATLRCSM-KGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERD 86 (229)
T ss_dssp CSEEEEETTCCEEEEEEE-CSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGG
T ss_pred CCEEEEcCCCCEEEEeEe-cCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhH
Confidence 345578899999999998 4333 46899998632 111 1234444321 2379999999999
Q ss_pred CeEEEEEEEcCC------Cc--eEEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEee-cCCC-eEEEEeCCccCCC
Q psy17058 248 EGKYTCIAENSA------GK--EVMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATG-RPMP-TVSWVKYIAPFDR 317 (471)
Q Consensus 248 ~G~Y~C~~~~~~------~~--~~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~i~W~~~~~~~~~ 317 (471)
+|.|.|.+.+.. .. ......|.|.........| .+.+.. ..+.|.|.+.| +|.+ .+.|+++ ..+..
T Consensus 87 sg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P--~v~~~~-~~~~L~C~~~g~~P~~i~v~W~~~-~~~~~ 162 (229)
T 1hxm_A 87 EGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKP--SVFVMK-NGTNVACLVKEFYPKDIRINLVSS-KKITE 162 (229)
T ss_dssp CEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCC--EEEEEE-ETTEEEEEEESCBSSCCEEEEECS-SEEEE
T ss_pred CeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCC--cEEEcC-CCCeEEEEEEEEeCCCEEEEEecC-CEEec
Confidence 999999998753 11 1123467776421111111 122111 23589999998 4554 8999998 66542
Q ss_pred cccccccCceeEEEEeecC-CCCCeEEEEEEEcCCC
Q psy17058 318 NLERDELTSRAVYTIASVR-ESDAGQYKCIGKNSAG 352 (471)
Q Consensus 318 ~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~a~n~~g 352 (471)
..........+++.+.... .++.|.|+|.|.|..+
T Consensus 163 ~~~~~~~~~dg~y~~~~~~~~~~~~~ytC~V~h~~~ 198 (229)
T 1hxm_A 163 FDPAIVISPSGKYNAVKLGKYEDSNSVTCSVQHDNK 198 (229)
T ss_dssp CCCEEEECTTSSEEEEEEEEETTTTTCEEEEEETTE
T ss_pred CccceEECCCCcEEEEECcccCCCCcEEEEEEeCCC
Confidence 2111111223344444433 3788999999999864
No 452
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.35 E-value=2.8e-12 Score=96.34 Aligned_cols=85 Identities=24% Similarity=0.412 Sum_probs=68.6
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc--------cCcEEEEcCCCCCCCeEEEEEEE
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI--------AGETLIINGITKADEGVYICSIQ 160 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~--------~~~~L~i~~v~~~D~G~Y~C~~~ 160 (471)
.+|.+...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ...+|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRN-RQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAV 82 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEET-TEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEEC-CEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEE
Confidence 4788888899999999999999999 8888899999999 555443211 22379999999999999999999
Q ss_pred ecCCceeeeeEEEEEe
Q psy17058 161 NAQGNVFQDYASIQVD 176 (471)
Q Consensus 161 ~~~~~~~~~~~~l~v~ 176 (471)
|..|. ......|.|.
T Consensus 83 N~~g~-~~~~~~l~V~ 97 (99)
T 1u2h_A 83 NEYGA-RQCEARLEVR 97 (99)
T ss_dssp ETTEE-EEEEEEEEEE
T ss_pred ECCCc-eeEEEEEEEE
Confidence 98887 5555566554
No 453
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=3e-12 Score=96.14 Aligned_cols=86 Identities=22% Similarity=0.342 Sum_probs=70.6
Q ss_pred ecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeee--ceEEEeccCCCCCeEEEEEEEcCCCce
Q psy17058 185 IHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQEL--GVLRFNNIATGDEGKYTCIAENSAGKE 262 (471)
Q Consensus 185 ~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 262 (471)
..+..+..+.+|+.++|.|.+ .|.+.+.|+|++..+....++.+...+ ..|.|.++..+|+|.|+|.+.|. ..
T Consensus 11 ~~~~~~~~v~~G~~v~l~C~v---~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~ 85 (100)
T 2yuz_A 11 LTPLTDQTVNLGKEICLKCEI---SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NV 85 (100)
T ss_dssp SBCCCCEEEETTSCCCEEEEC---SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CC
T ss_pred eccCCceEEcCCCCEEEEEEe---CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--Ce
Confidence 344556789999999999998 677899999999887777777666543 37999999999999999999987 55
Q ss_pred EEEEEEEEEeCCc
Q psy17058 263 VMNAYIHVLTLPA 275 (471)
Q Consensus 263 ~~~~~l~V~~~p~ 275 (471)
+.++.|.|..+|.
T Consensus 86 ~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 86 TLPAKVHVISGPS 98 (100)
T ss_dssp CEEEEEEEECCSC
T ss_pred eEEEEEEEeCCCC
Confidence 6778888887764
No 454
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.34 E-value=3e-12 Score=97.01 Aligned_cols=85 Identities=25% Similarity=0.393 Sum_probs=70.1
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-------cCcEEEEcCCCCCCCeEEEEEEEe
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-------AGETLIINGITKADEGVYICSIQN 161 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~~~ 161 (471)
.+|.+...+....+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 85 (103)
T 3qp3_A 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHN-GVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTN 85 (103)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEEC-CEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEe
Confidence 5788888899999999999999999 7889999999999 555543222 234799999999999999999999
Q ss_pred cCCceeeeeEEEEEe
Q psy17058 162 AQGNVFQDYASIQVD 176 (471)
Q Consensus 162 ~~~~~~~~~~~l~v~ 176 (471)
..|. ....+.|.|.
T Consensus 86 ~~G~-~~~~~~l~V~ 99 (103)
T 3qp3_A 86 YKGE-ASDYATLDVT 99 (103)
T ss_dssp TTEE-EEEEEEEEEE
T ss_pred CCCc-EEEEEEEEEE
Confidence 9887 5666666665
No 455
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.34 E-value=1.9e-12 Score=93.52 Aligned_cols=78 Identities=27% Similarity=0.457 Sum_probs=62.3
Q ss_pred ccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc--cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 282 EYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL--ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVIT 359 (471)
Q Consensus 282 ~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 359 (471)
..+.+.+|+++.|.|.+.+ |.|.+.|+|+|..+.... .........+|.|.+++.+|+|.|+|.|.| .+.++.
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~ 78 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIFL 78 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEEE
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEEE
Confidence 3568899999999999965 888999999999986432 222334557899999999999999999844 566778
Q ss_pred EEEec
Q psy17058 360 VAVEH 364 (471)
Q Consensus 360 l~V~~ 364 (471)
|.|..
T Consensus 79 l~V~e 83 (84)
T 2lu7_A 79 VSVEE 83 (84)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 88865
No 456
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.34 E-value=3.3e-12 Score=98.96 Aligned_cols=85 Identities=16% Similarity=0.124 Sum_probs=66.5
Q ss_pred CCcEEEcCCceeecCCCcEEEEee-CC---CCCCeEEEEeCCCCCC-----CCCcc-----------cCcEEEEcCCCCC
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECK-SN---DPSATIKWSKDNQEQL-----PPNMI-----------AGETLIINGITKA 150 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~-~~---~p~~~v~W~~~~~~~~-----~~~~~-----------~~~~L~i~~v~~~ 150 (471)
.+.|...|.++.+.+|++++|.|. .+ .|.+.|.|||+ +... ..... ....|+|.+++.+
T Consensus 7 ~~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kg-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 85 (126)
T 2dav_A 7 GILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKG-KWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDN 85 (126)
T ss_dssp SCSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEES-SSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTT
T ss_pred ccEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeC-cCcccCCCCCceEEEccccccccccceEEEEEccCCcc
Confidence 356777889999999999999998 44 38899999997 3110 00111 2478999999999
Q ss_pred CCeEEEEEEEecCCceeeeeEEEEEee
Q psy17058 151 DEGVYICSIQNAQGNVFQDYASIQVDK 177 (471)
Q Consensus 151 D~G~Y~C~~~~~~~~~~~~~~~l~v~~ 177 (471)
|+|.|+|++.|..+. .+..+.|.|.+
T Consensus 86 DaG~Y~Cevsn~~g~-~~~~~~L~V~~ 111 (126)
T 2dav_A 86 FAGNYRCEVTYKDKF-DSCSFDLEVHE 111 (126)
T ss_dssp SCEEEEEEEECSSCE-EEECCEEEEEC
T ss_pred cCEEEEEEEEeCCCc-EEEEEEEEEEe
Confidence 999999999999876 77778888775
No 457
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=3.5e-12 Score=95.22 Aligned_cols=85 Identities=26% Similarity=0.505 Sum_probs=68.0
Q ss_pred cCCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCce
Q psy17058 88 SPQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNV 166 (471)
Q Consensus 88 ~~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 166 (471)
...+|.+...|....+.+|++++|.|. .+.|.+.+.|+|+ +..+... ....|.|.+++.+|+|.|+|.+.|..+.
T Consensus 7 ~~~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~-~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~~~- 82 (96)
T 2ens_A 7 GLEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKD-GVPLPLP--PSPVLILPEIGPQDQGTYSCVATHSSHG- 82 (96)
T ss_dssp CCCSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEES-SSBCSSC--CCSEEEEESCCTTTCEEEECEECCSSCC-
T ss_pred CCCCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEEC-CEECcCC--CCCEEEECCCCcccCEEEEEEEEeCCCC-
Confidence 346788899998999999999999999 8888899999998 6555432 4679999999999999999999996544
Q ss_pred eeeeEEEEEe
Q psy17058 167 FQDYASIQVD 176 (471)
Q Consensus 167 ~~~~~~l~v~ 176 (471)
...+..+.|.
T Consensus 83 ~~~s~~~~v~ 92 (96)
T 2ens_A 83 PQESRAVSIS 92 (96)
T ss_dssp CEECCCEEEE
T ss_pred cEEEEEEEEE
Confidence 3334444444
No 458
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=5.9e-12 Score=98.01 Aligned_cols=93 Identities=20% Similarity=0.309 Sum_probs=73.9
Q ss_pred CCeeeec--CCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEee--eceEEEeccCCCCCeEEEEEE
Q psy17058 180 MPRIRIH--PNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQE--LGVLRFNNIATGDEGKYTCIA 255 (471)
Q Consensus 180 ~p~~~~~--~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~~ 255 (471)
+|.+.+. ......+.+|+.++|.|.+ .+.|.+.+.|+|++..+. ..+..+... ...|.|.++..+|+|.|+|.+
T Consensus 21 ~P~i~~~~~~~~~~~v~~G~~~~l~C~~-~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 98 (118)
T 2e7c_A 21 PPKIRLPRHLRQTYIRKVGEQLNLVVPF-QGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSV 98 (118)
T ss_dssp EEEECCCTTTSSCEEEESSSCEEEEEEE-EEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEE
T ss_pred CCeEecCcccCCCEEEECCCEEEEEEEE-ccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEE
Confidence 4555433 3456678899999999999 788999999999988765 344444332 345999999999999999999
Q ss_pred EcCCCceEEEEEEEEEeCC
Q psy17058 256 ENSAGKEVMNAYIHVLTLP 274 (471)
Q Consensus 256 ~~~~~~~~~~~~l~V~~~p 274 (471)
.|..|..+..+.|.|..+|
T Consensus 99 ~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 99 QIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp ECSSCEECCEEEEEEECCC
T ss_pred EeCCCeEEEEEEEEEEcCC
Confidence 9999988888899988765
No 459
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.33 E-value=5.4e-12 Score=93.28 Aligned_cols=82 Identities=16% Similarity=0.163 Sum_probs=63.8
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEeeCCCCCCeEEEEeCCCCCCCCCcc-------cCcEEEEcCCCCCCCeEEEEEEEe
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECKSNDPSATIKWSKDNQEQLPPNMI-------AGETLIINGITKADEGVYICSIQN 161 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~v~W~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~~~ 161 (471)
..++.|...+.++.+.+|+++.|.|....+.+.+.|+|+ +..+..... ....|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~v~W~k~-g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSEPDVHGQWKLK-GQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESSSSCCCEEEET-TEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECCCCCeEEEEEC-CEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 457888888999999999999999993235578999999 666544322 235899999999999999999977
Q ss_pred cCCceeeeeEEEEEe
Q psy17058 162 AQGNVFQDYASIQVD 176 (471)
Q Consensus 162 ~~~~~~~~~~~l~v~ 176 (471)
. ..++.|.|.
T Consensus 82 ~-----~~sa~L~V~ 91 (93)
T 1waa_A 82 T-----KSAANLKVK 91 (93)
T ss_dssp E-----EEEEEEEEE
T ss_pred C-----cEEEEEEEE
Confidence 3 345666664
No 460
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.33 E-value=5.4e-12 Score=96.32 Aligned_cols=93 Identities=26% Similarity=0.442 Sum_probs=74.0
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeec--eEEEeccCCCCCeEEEEEEEc
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELG--VLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+....++.+...+. .|.|.+++.+|+|.|+|.+.|
T Consensus 13 ~P~~~~~~-~~~~v~~G~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 90 (107)
T 3irg_B 13 PPCFLRFP-RPVRVVSGAEAELKCVV-LGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEEECC-CCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeeEcCC-ccEEEeCCCeEEEEEEE-eecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEc
Confidence 45554443 46678899999999999 788889999999988766655555544222 799999999999999999999
Q ss_pred CCCceEEEEEEEEEeCC
Q psy17058 258 SAGKEVMNAYIHVLTLP 274 (471)
Q Consensus 258 ~~~~~~~~~~l~V~~~p 274 (471)
..|.....+.|.|..+|
T Consensus 91 ~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCcEEEEEEEEEEcCC
Confidence 99988888889887654
No 461
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.33 E-value=6.6e-14 Score=109.92 Aligned_cols=102 Identities=17% Similarity=0.250 Sum_probs=81.0
Q ss_pred EEEEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCe-EEEEeCCccCCCc--cc--c--cccCc--eeEEEEe
Q psy17058 263 VMNAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPT-VSWVKYIAPFDRN--LE--R--DELTS--RAVYTIA 333 (471)
Q Consensus 263 ~~~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~-i~W~~~~~~~~~~--~~--~--~~~~~--~~~l~i~ 333 (471)
+..+.|.|..+|.+.. + ....+.+|+.+.|.|.+.|.|.|. +.|++++..+... .+ . ..... .+.|.|.
T Consensus 4 ~~~~~l~V~~~P~i~~-~-~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~ 81 (122)
T 2cry_A 4 GSSGTLTVNGPPIISS-T-QTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTIS 81 (122)
T ss_dssp SCCCCCCCCSSCCEEE-E-CCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECT
T ss_pred ceEEEEEEecCCCccC-C-CeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEc
Confidence 3455677888888876 3 456789999999999999999986 9999998877642 11 1 00112 5689999
Q ss_pred ecCCCCC-eEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 334 SVRESDA-GQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 334 ~~~~~d~-G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
+++.+|. |.|+|.|.|..|.....+.|.|...+
T Consensus 82 ~v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 115 (122)
T 2cry_A 82 NIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSE 115 (122)
T ss_dssp TCCHHHHHSCEEEEEECSSCEEEEEECCCCSCSS
T ss_pred CCChhhCCceEEEEEECCCCeEEEEEEEEECCCC
Confidence 9999999 99999999999999999999988654
No 462
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.32 E-value=9.2e-12 Score=96.47 Aligned_cols=95 Identities=25% Similarity=0.448 Sum_probs=75.7
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCc-CCCceEEeeec---eEEEeccCCCCCeEEEEEE
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKF-GPDVEVYQELG---VLRFNNIATGDEGKYTCIA 255 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~---~l~i~~~~~~d~G~Y~C~~ 255 (471)
+|.+... +....+.+|+.++|.|.+ .+.|.+.+.|++++..+.. ..++.+..... .|.|.+++.+|+|.|+|.+
T Consensus 15 ~p~f~~~-p~~~~v~~G~~v~L~C~~-~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 15 APMFIYK-PQSKKVLEGDSVKLECQI-SAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp CCCBSSC-CCCEEEETTEEEEEEEEB-CCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCeEEeC-CCcEEEeCCCcEEEEEEE-eccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 4444444 445688999999999999 7889999999999877554 34454444322 7999999999999999999
Q ss_pred EcCCCceEEEEEEEEEeCCce
Q psy17058 256 ENSAGKEVMNAYIHVLTLPAV 276 (471)
Q Consensus 256 ~~~~~~~~~~~~l~V~~~p~~ 276 (471)
.|..|.....+.|.|..+|..
T Consensus 93 ~N~~G~~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 93 VNEAGVTTCNTRLDVTARPNQ 113 (116)
T ss_dssp EETTEEEEEEEEEEEECCSCC
T ss_pred EcCCCeEEEEEEEEEeCCCCC
Confidence 999999888999999877653
No 463
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.32 E-value=1.2e-11 Score=92.72 Aligned_cols=87 Identities=28% Similarity=0.484 Sum_probs=66.1
Q ss_pred CCCCcEEEc-CCceeecCCCcEEEEee-C-CCCCCeEEEEeCCCCCCCCCcc-cCcEEEEcCCCCCCCeEEEEEEEecCC
Q psy17058 89 PQANEVQVT-PRQQSAPEGSQVTIECK-S-NDPSATIKWSKDNQEQLPPNMI-AGETLIINGITKADEGVYICSIQNAQG 164 (471)
Q Consensus 89 ~~~~~v~~~-p~~~~v~~G~~v~l~C~-~-~~p~~~v~W~~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~~~~~~~ 164 (471)
..++.+.+. |....+.+|+++.|.|. . +.|.+.+.|++++......... .++.|.|.+++.+|+|.|+|.+.|..|
T Consensus 7 ~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (98)
T 1gl4_B 7 SKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMFA 86 (98)
T ss_dssp --CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTEEEETTEEEECSCCGGGCEEEEEEEECSSC
T ss_pred CCCcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCceeecCCCEEEEeCCChhhCEEEEEEecCCCC
Confidence 345666665 45678999999999999 5 6889999999984333333222 567999999999999999999999988
Q ss_pred ceeeeeEEEEEe
Q psy17058 165 NVFQDYASIQVD 176 (471)
Q Consensus 165 ~~~~~~~~l~v~ 176 (471)
. ......|.|.
T Consensus 87 ~-~~~~~~l~V~ 97 (98)
T 1gl4_B 87 M-DQGTATLHVQ 97 (98)
T ss_dssp E-EEEEEEEEEC
T ss_pred c-cccEEEEEEe
Confidence 7 5556666553
No 464
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=6.1e-12 Score=96.57 Aligned_cols=86 Identities=26% Similarity=0.385 Sum_probs=69.9
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCC-c--c----cC--cEEEEcCCCCCCCeEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPN-M--I----AG--ETLIINGITKADEGVYICS 158 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~-~--~----~~--~~L~i~~v~~~D~G~Y~C~ 158 (471)
..+|.|...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+... . . .. ..|.|.+++.+|+|.|+|.
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKD-GKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIM 84 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECS-SCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEEC-CEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEE
Confidence 46788888888999999999999999 8889999999998 5555432 1 1 12 2799999999999999999
Q ss_pred EEecCCceeeeeEEEEEe
Q psy17058 159 IQNAQGNVFQDYASIQVD 176 (471)
Q Consensus 159 ~~~~~~~~~~~~~~l~v~ 176 (471)
+.|..|. ....+.|.|.
T Consensus 85 a~N~~g~-~~~~~~l~V~ 101 (110)
T 2dm2_A 85 AANPQGR-ISCTGRLMVQ 101 (110)
T ss_dssp EECTTCC-EEECCCEEEE
T ss_pred EEECCCe-EEEEEEEEEE
Confidence 9999988 5666666665
No 465
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=2.9e-12 Score=98.17 Aligned_cols=85 Identities=20% Similarity=0.251 Sum_probs=66.3
Q ss_pred CccEEecCCCcEEEEEEEeec---CCCeEEEEeCCc-cCCC----cccc------cccCceeEEEEeecCCCCCeEEEEE
Q psy17058 281 SEYVSVRPGEPLTLECEATGR---PMPTVSWVKYIA-PFDR----NLER------DELTSRAVYTIASVRESDAGQYKCI 346 (471)
Q Consensus 281 ~~~~~~~~g~~v~l~C~~~g~---p~~~i~W~~~~~-~~~~----~~~~------~~~~~~~~l~i~~~~~~d~G~Y~C~ 346 (471)
+.++.+.+|++++|.|.+.|. |.|.|.|+|+.. .+.. .... ........|.|.++...|+|.|+|+
T Consensus 19 P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Ce 98 (118)
T 2edn_A 19 PDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLE 98 (118)
T ss_dssp CCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEE
T ss_pred CCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEE
Confidence 456789999999999999875 788999999741 1111 1110 0111358899999999999999999
Q ss_pred EEcCCCceEEEEEEEEecC
Q psy17058 347 GKNSAGTEEKVITVAVEHR 365 (471)
Q Consensus 347 a~n~~g~~~~~~~l~V~~~ 365 (471)
|.|..|..+..+.|.|..+
T Consensus 99 vsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 99 VKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp EECSSCEEEEEECCEEECC
T ss_pred EEEcCCcEEEEEEEEEEcC
Confidence 9999999999999999864
No 466
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.31 E-value=1.9e-11 Score=91.35 Aligned_cols=84 Identities=21% Similarity=0.260 Sum_probs=70.1
Q ss_pred CCCceeEEcCCeEEEEEEccCCC-CCCeEEEEeCCCCCCcCCCceEEeeec--eEEEeccCCCCCeEEEEEEEcCCCceE
Q psy17058 187 PNASQTFIVGDRADIQCVLEAGE-PSPTQTWIRPDNDGKFGPDVEVYQELG--VLRFNNIATGDEGKYTCIAENSAGKEV 263 (471)
Q Consensus 187 ~~~~~~v~~g~~~~L~C~~~~~~-p~~~v~W~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C~~~~~~~~~~ 263 (471)
++....+.+|+.++|.|.+ .+. |.+.+.|++++..+....++.+...++ .|.|.+++..|+|.|+|.+.|..|...
T Consensus 7 ~~~~~~v~~G~~v~l~C~~-~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 85 (97)
T 2bk8_A 7 QIMHAVGEEGGHVKYVCKI-ENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDS 85 (97)
T ss_dssp CCCCEEECTTCCEEEEEEE-ESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred cCcCEEEcCCCcEEEEEEE-eccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEe
Confidence 4456678899999999999 565 889999999998766666666544444 899999999999999999999999888
Q ss_pred EEEEEEEE
Q psy17058 264 MNAYIHVL 271 (471)
Q Consensus 264 ~~~~l~V~ 271 (471)
..+.|.|.
T Consensus 86 ~~~~l~V~ 93 (97)
T 2bk8_A 86 SYAELFVK 93 (97)
T ss_dssp EEEEEEET
T ss_pred EEEEEEEE
Confidence 88888775
No 467
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=3.4e-12 Score=98.02 Aligned_cols=87 Identities=24% Similarity=0.439 Sum_probs=71.6
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc--------cCcEEEEcCCCCCCCeEEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI--------AGETLIINGITKADEGVYICSI 159 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~--------~~~~L~i~~v~~~D~G~Y~C~~ 159 (471)
..+|.|...|..+.+.+|++++|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.+
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLD-GKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIA 85 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBS-SSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEEC-CEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEE
Confidence 45788999999999999999999999 8889999999998 555443221 2358999999999999999999
Q ss_pred EecCCceeeeeEEEEEee
Q psy17058 160 QNAQGNVFQDYASIQVDK 177 (471)
Q Consensus 160 ~~~~~~~~~~~~~l~v~~ 177 (471)
.|..+. ....+.|.|..
T Consensus 86 ~n~~g~-~~~~~~l~V~~ 102 (110)
T 2dm3_A 86 TNRAGQ-NSFSLELVVAA 102 (110)
T ss_dssp ECSSCE-EEECCEEEEEC
T ss_pred ECCCCE-EEEEEEEEEeC
Confidence 999887 66666677653
No 468
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.31 E-value=1.1e-11 Score=91.47 Aligned_cols=82 Identities=24% Similarity=0.580 Sum_probs=65.7
Q ss_pred eeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceE
Q psy17058 276 VTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEE 355 (471)
Q Consensus 276 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 355 (471)
+...| ....+.+|+.+.|.|.+.|+|.+.+.|++++..+... ....|.|.+++.+|+|.|+|.|.|..|...
T Consensus 6 i~~~p-~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 77 (91)
T 3bfo_A 6 ICVEP-TSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE-------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQD 77 (91)
T ss_dssp EEECC-CCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC-------CSSEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred EEECC-CccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC-------CCCeEEECCCCHHhCEEEEEEEEcCCCCEE
Confidence 33443 3467889999999999999999999999998876432 246899999999999999999999999754
Q ss_pred -EEEEEEEecC
Q psy17058 356 -KVITVAVEHR 365 (471)
Q Consensus 356 -~~~~l~V~~~ 365 (471)
..+.|.|.+.
T Consensus 78 s~~~~l~V~~~ 88 (91)
T 3bfo_A 78 SKKVEIIIDEL 88 (91)
T ss_dssp CCCEEEEEC--
T ss_pred eeeEEEEEehh
Confidence 5577777653
No 469
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.31 E-value=2.5e-11 Score=95.03 Aligned_cols=96 Identities=18% Similarity=0.337 Sum_probs=70.4
Q ss_pred ecCCCceeEEcCCeEEEEEEccCC--CCCCeEEEEeCCCCCCc-----CCCceE-----EeeeceEEEeccCCCCCeEEE
Q psy17058 185 IHPNASQTFIVGDRADIQCVLEAG--EPSPTQTWIRPDNDGKF-----GPDVEV-----YQELGVLRFNNIATGDEGKYT 252 (471)
Q Consensus 185 ~~~~~~~~v~~g~~~~L~C~~~~~--~p~~~v~W~~~~~~~~~-----~~~~~~-----~~~~~~l~i~~~~~~d~G~Y~ 252 (471)
+.+.....+.+|+.++|.|.+ .+ .|.+.+.|++++..+.. ...... ....+.|.|.+++.+|+|.|+
T Consensus 12 i~p~~~v~v~~G~~v~L~C~~-~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 90 (122)
T 3s35_X 12 LSPSHGIELSVGEKLVLNCTA-RTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYT 90 (122)
T ss_dssp EESCSCEEEEETCCEEEEEEE-EECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEE
T ss_pred EcCCCCEEEecCCeEEEEEEE-EcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEE
Confidence 344445578899999999999 55 45578999999875321 111111 123567999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEEeCCceeeCCC
Q psy17058 253 CIAENSAGKEVMNAYIHVLTLPAVTITPS 281 (471)
Q Consensus 253 C~~~~~~~~~~~~~~l~V~~~p~~~~~~~ 281 (471)
|.|.|..|.....+.|.|..+|.+.+.+.
T Consensus 91 C~a~n~~g~~~~~~~l~V~~~p~i~~~p~ 119 (122)
T 3s35_X 91 CAASSGLMTKKNSTFVRVHEKPFVAFGSG 119 (122)
T ss_dssp EEEECSSCEEEEEEEEEEEEEECC-----
T ss_pred EEEccCCCceEEEEEEEEeccCeEEeecC
Confidence 99999999999999999999998877653
No 470
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.30 E-value=3.3e-12 Score=97.26 Aligned_cols=86 Identities=21% Similarity=0.450 Sum_probs=70.8
Q ss_pred CCCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc-------cCcEEEEcCCCCCCCeEEEEEEE
Q psy17058 89 PQANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI-------AGETLIINGITKADEGVYICSIQ 160 (471)
Q Consensus 89 ~~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~-------~~~~L~i~~v~~~D~G~Y~C~~~ 160 (471)
..+|.|...|..+.+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ....|.|.+++.+|+|.|+|.+.
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 90 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRK-GQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVE 90 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSS-SSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCB
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEEC-CEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEE
Confidence 45688889999999999999999999 8889999999999 555543222 24689999999999999999999
Q ss_pred ecCCceeeeeEEEEEe
Q psy17058 161 NAQGNVFQDYASIQVD 176 (471)
Q Consensus 161 ~~~~~~~~~~~~l~v~ 176 (471)
|..|. ....+.|.|.
T Consensus 91 N~~G~-~~~~~~l~V~ 105 (106)
T 1nct_A 91 NSEGK-QEAEFTLTIQ 105 (106)
T ss_dssp CSSCB-CCEEEEEEEC
T ss_pred eCCCe-EEEEEEEEEE
Confidence 99887 5556666553
No 471
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=3.9e-12 Score=95.52 Aligned_cols=81 Identities=17% Similarity=0.390 Sum_probs=67.7
Q ss_pred cEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 283 YVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 283 ~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
...+.+|+.+.|.|.+.+.| +.+.|++++..+........ ....|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 12 ~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~--~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 88 (99)
T 2cr3_A 12 SFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRI--TGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNV 88 (99)
T ss_dssp ECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEE--CSSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECB
T ss_pred CeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEE--ECCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEE
Confidence 34678999999999999877 79999999988754332111 2568999999999999999999999999999999999
Q ss_pred ecCC
Q psy17058 363 EHRP 366 (471)
Q Consensus 363 ~~~p 366 (471)
...+
T Consensus 89 ~~~~ 92 (99)
T 2cr3_A 89 SDAL 92 (99)
T ss_dssp CSCC
T ss_pred ecCC
Confidence 8764
No 472
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.30 E-value=1.2e-11 Score=93.11 Aligned_cols=92 Identities=22% Similarity=0.359 Sum_probs=71.3
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEe-ee--ceEEEeccCCCCCeEEEEEEE
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQ-EL--GVLRFNNIATGDEGKYTCIAE 256 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~--~~l~i~~~~~~d~G~Y~C~~~ 256 (471)
+|.+... +....+.+|+.++|.|.+ .+.|.+.+.|++++..+.......... .. ..|.|.+++..|+|.|+|.+.
T Consensus 5 ~P~~~~~-p~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (100)
T 2kdg_A 5 PPRFIQV-PENMSIDEGRFCRMDFKV-SGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAK 82 (100)
T ss_dssp EEECCCC-CCCEEEETTCCEEEEEEC-EEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCeEEeC-CCCEEecCCCEEEEEEEE-EeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEE
Confidence 3444333 345678899999999999 678889999999987755544333222 12 379999999999999999999
Q ss_pred cCCCceEEEEEEEEEeC
Q psy17058 257 NSAGKEVMNAYIHVLTL 273 (471)
Q Consensus 257 ~~~~~~~~~~~l~V~~~ 273 (471)
|..|..+..+.|.|...
T Consensus 83 n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 83 NRAGEATFTVQLDVLAK 99 (100)
T ss_dssp ETTEEEEEEEEEEEECC
T ss_pred cCCCeEEEEEEEEEEec
Confidence 99999888888888754
No 473
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.29 E-value=4.2e-12 Score=119.71 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=67.4
Q ss_pred cEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc---cccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 283 YVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL---ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVIT 359 (471)
Q Consensus 283 ~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~---~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 359 (471)
.+.+.+|+++.|.|.+.| |.+.+.|++++..+.... ..... ..++|.|.+++.+|+|.|+|.|.|..|..+..+.
T Consensus 255 ~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 332 (361)
T 2xot_A 255 AWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNGDLFFKKVQVEDGGVYTCYAMGETFNETLSVE 332 (361)
T ss_dssp CCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETTEEEESSCCTTSCEEEEEEEECSSCEEEEEEE
T ss_pred CceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecCeEEEeecCcccCEEEEEEEecCCCccEEEEE
Confidence 458899999999999998 999999999776543211 01112 4568999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCCCCCccccCCCcccCCCCCCCceEEEcCCcceEEeeecCCeeEEcCCeeeeeCCCeEEEEEEeccc
Q psy17058 360 VAVEHRPEYGPISPRPGADILPDGDEYYRPEPEEGEYVYAVGSNASISCSVEPPRITLRPVRQTVKPGDIANIRCSAIGA 439 (471)
Q Consensus 360 l~V~~~p~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~y~c~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~ 439 (471)
|.|... + .+|+.+.|.|.+.|.
T Consensus 333 l~V~~~-----------------------------------------------~-----------~~g~~~~l~C~~~g~ 354 (361)
T 2xot_A 333 LKVYNF-----------------------------------------------T-----------LHGHHDTLNAAADPW 354 (361)
T ss_dssp EEEESS-----------------------------------------------C-----------CC-------------
T ss_pred EEEEee-----------------------------------------------e-----------ccCCceEEEEEeCCC
Confidence 998653 1 468899999999999
Q ss_pred CCceEE
Q psy17058 440 TPISIR 445 (471)
Q Consensus 440 p~~~v~ 445 (471)
|+|+|+
T Consensus 355 P~P~i~ 360 (361)
T 2xot_A 355 SHPQFE 360 (361)
T ss_dssp ------
T ss_pred CCCccc
Confidence 999874
No 474
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.29 E-value=9.6e-12 Score=94.17 Aligned_cols=84 Identities=18% Similarity=0.267 Sum_probs=66.5
Q ss_pred eCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc----cccccCceeEEEEeecCCCCCeEEEEEEEcCCCc
Q psy17058 278 ITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL----ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGT 353 (471)
Q Consensus 278 ~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~----~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 353 (471)
..+.....+.+|+++.|.|.+.+ |.+.+.|++++..+.... ..........|.|.+++.+|+|.|+|.|.|
T Consensus 11 ~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n---- 85 (103)
T 1x44_A 11 TKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG---- 85 (103)
T ss_dssp SBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT----
T ss_pred eccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC----
Confidence 33445678899999999999987 778999999998876433 222233457899999999999999999988
Q ss_pred eEEEEEEEEecCC
Q psy17058 354 EEKVITVAVEHRP 366 (471)
Q Consensus 354 ~~~~~~l~V~~~p 366 (471)
.+.++.|.|..+|
T Consensus 86 ~~~~~~l~V~~~p 98 (103)
T 1x44_A 86 GQSSAKLSVDLKS 98 (103)
T ss_dssp EEEEEEEEEECCC
T ss_pred CcEEEEEEEeCCC
Confidence 5777888888765
No 475
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.29 E-value=1.7e-11 Score=110.35 Aligned_cols=168 Identities=17% Similarity=0.256 Sum_probs=104.8
Q ss_pred ceeEEcCCeEEEEEEccCC-CCCCeEEEEeCCCCCC-------------------cCCCceEEee----eceEEEeccCC
Q psy17058 190 SQTFIVGDRADIQCVLEAG-EPSPTQTWIRPDNDGK-------------------FGPDVEVYQE----LGVLRFNNIAT 245 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~-~p~~~v~W~~~~~~~~-------------------~~~~~~~~~~----~~~l~i~~~~~ 245 (471)
...+.+|++++|.|.+... .....+.|||...... ...++.+..+ ...|.|.+++.
T Consensus 32 ~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 111 (267)
T 3u1s_H 32 AEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLTA 111 (267)
T ss_dssp CEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCCG
T ss_pred CEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCCh
Confidence 3467899999999998321 2346899998532210 1123333321 23599999999
Q ss_pred CCCeEEEEEEEcC------CC------------c-------eEEEEEEEEE----eCCceee-CCCccEEecCCCcEEEE
Q psy17058 246 GDEGKYTCIAENS------AG------------K-------EVMNAYIHVL----TLPAVTI-TPSEYVSVRPGEPLTLE 295 (471)
Q Consensus 246 ~d~G~Y~C~~~~~------~~------------~-------~~~~~~l~V~----~~p~~~~-~~~~~~~~~~g~~v~l~ 295 (471)
+|+|.|.|.+.+. .+ . ......|.|. .+|.+.. .+.. ...+|+.+.|.
T Consensus 112 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~--~~~~g~~~~l~ 189 (267)
T 3u1s_H 112 DDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSS--KSTSGGTAALG 189 (267)
T ss_dssp GGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCG--GGEETTEEEEE
T ss_pred hhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCc--ccCCCCcEEEE
Confidence 9999999999620 00 0 0112345554 2344442 2222 23468999999
Q ss_pred EEEee-cC-CCeEEEEeCCccCCCccc--------ccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEEEE
Q psy17058 296 CEATG-RP-MPTVSWVKYIAPFDRNLE--------RDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITVAV 362 (471)
Q Consensus 296 C~~~g-~p-~~~i~W~~~~~~~~~~~~--------~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 362 (471)
|.+.+ +| .+.+.| ++..+..... .......+.|.|.....+| +.|+|.|.|..+.......+.+
T Consensus 190 C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 263 (267)
T 3u1s_H 190 CLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 263 (267)
T ss_dssp EEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceEEEccc
Confidence 99987 55 458999 5555432110 1112234578898888888 9999999998877666555544
No 476
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.29 E-value=4.2e-11 Score=90.02 Aligned_cols=89 Identities=17% Similarity=0.187 Sum_probs=70.1
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc--cccccCceeEEEEeecCCCCCeEEEEEEEcC
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL--ERDELTSRAVYTIASVRESDAGQYKCIGKNS 350 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 350 (471)
+|.+...+.....+.+|+++.|.|.+. .|.+.+.|++++..+.... ..........|.|.+++.+|+|.|+|.|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a--- 82 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA--- 82 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE---
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE---
Confidence 455555544346788999999999998 7889999999998875432 2222334568999999999999999999
Q ss_pred CCceEEEEEEEEecCC
Q psy17058 351 AGTEEKVITVAVEHRP 366 (471)
Q Consensus 351 ~g~~~~~~~l~V~~~p 366 (471)
|....++.|.|..+|
T Consensus 83 -g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 -GDEKCSTELFVRSGP 97 (100)
T ss_dssp -TTEEEEEEEEECCSC
T ss_pred -CCceEEEEEEEecCC
Confidence 778888999998875
No 477
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=2.9e-12 Score=99.27 Aligned_cols=99 Identities=20% Similarity=0.245 Sum_probs=75.5
Q ss_pred EEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccccc---ccCceeEEEEeecCCCCCeE
Q psy17058 266 AYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERD---ELTSRAVYTIASVRESDAGQ 342 (471)
Q Consensus 266 ~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~---~~~~~~~l~i~~~~~~d~G~ 342 (471)
+.|.|..+|...........+.+|+++.|.|.+.|.|.|.+.|++++..+....... .......|.|.+++.+|+|.
T Consensus 5 a~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 84 (115)
T 2cr6_A 5 SSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGT 84 (115)
T ss_dssp CCCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEE
T ss_pred EEEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEE
Confidence 345566655444444456789999999999999999999999999998876432211 12445689999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEecCCCC
Q psy17058 343 YKCIGKNSAGTEEKVITVAVEHRPEY 368 (471)
Q Consensus 343 Y~C~a~n~~g~~~~~~~l~V~~~p~~ 368 (471)
|+|. .|.....+.|.|..+|..
T Consensus 85 Y~C~----~g~~~~~~~L~V~~~p~~ 106 (115)
T 2cr6_A 85 IYFE----AGDQRASAALRVTEKPSV 106 (115)
T ss_dssp EEEE----ETTEECCEEEEEECCSSC
T ss_pred EEEE----ECCeeEEEEEEEECCCce
Confidence 9999 466777889999987643
No 478
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.28 E-value=2.1e-11 Score=91.49 Aligned_cols=90 Identities=26% Similarity=0.399 Sum_probs=72.9
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeec--eEEEeccCCCCCeEEEEEEEc
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELG--VLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|++++..+....++.+..... .|.|.++..+|+|.|+|.+.|
T Consensus 6 ~P~i~~~~-~~~~v~~G~~~~l~C~~-~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 83 (99)
T 3puc_A 6 KPVIVTGL-QDTTVSSDSVAKFAVKA-TGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKN 83 (99)
T ss_dssp EEEEEECC-CCEEEESSSCEEEEEEE-EEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCEEEecC-ccEEEeCCCcEEEEEEE-EecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEe
Confidence 34444433 45678899999999999 778889999999998776666666655333 699999999999999999999
Q ss_pred CCCceEEEEEEEEE
Q psy17058 258 SAGKEVMNAYIHVL 271 (471)
Q Consensus 258 ~~~~~~~~~~l~V~ 271 (471)
..|..+..+.|.|.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 84 SAGSVSSSCKLTIK 97 (99)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEeEEEEEEEE
Confidence 99988888888875
No 479
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.28 E-value=1e-11 Score=95.85 Aligned_cols=100 Identities=23% Similarity=0.327 Sum_probs=75.6
Q ss_pred CceEEEEEEEEEeCC-ceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--ccccCceeEEEEeecC
Q psy17058 260 GKEVMNAYIHVLTLP-AVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDELTSRAVYTIASVR 336 (471)
Q Consensus 260 ~~~~~~~~l~V~~~p-~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~l~i~~~~ 336 (471)
+..+.++.|.|...| .+... .....+.+|+++.|.|.+.+. |.+.|++++..+....+ .........|.|.+++
T Consensus 5 g~~~~~~~l~V~~~pp~~~~~-~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~ 81 (113)
T 2edh_A 5 SSGRTSAMLTVRALPIKFTEG-LRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLV 81 (113)
T ss_dssp CCCCCCCCCCCCCSCCCEEEC-CCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCC
T ss_pred CCCcEEEEEEEEcCCCccccc-CCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCC
Confidence 344555667777555 55444 345689999999999999764 68999999988764322 1222344589999999
Q ss_pred CCCCeEEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 337 ESDAGQYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 337 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
.+|+|.|+|.| |....++.|.|..+|
T Consensus 82 ~~D~G~Y~C~a----~~~~~~~~l~V~~~p 107 (113)
T 2edh_A 82 AEDAGEYLCMC----GKERTSAMLTVRAMP 107 (113)
T ss_dssp STTCEEEEEEE----TTEEEEEEEEECCCC
T ss_pred hhhCEEEEEEe----CCCCEEEEEEEeCCC
Confidence 99999999999 778888999998876
No 480
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.28 E-value=9e-12 Score=91.45 Aligned_cols=84 Identities=21% Similarity=0.375 Sum_probs=61.8
Q ss_pred CceeeCCCccE--EecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc--cccccCceeEEEEeecCCCCCeEEEEEEEc
Q psy17058 274 PAVTITPSEYV--SVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL--ERDELTSRAVYTIASVRESDAGQYKCIGKN 349 (471)
Q Consensus 274 p~~~~~~~~~~--~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 349 (471)
|...+.|.... .+.+|+.+.|.|.+.+ |.+.+.|+|+|..+.... .........+|.|.++..+|+|.|+|.|.|
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 33344454443 4568999999999865 888999999999987432 222334556899999999999999999866
Q ss_pred CCCceEEEEEEEE
Q psy17058 350 SAGTEEKVITVAV 362 (471)
Q Consensus 350 ~~g~~~~~~~l~V 362 (471)
.+.++.|.|
T Consensus 83 ----~~~~~~ltV 91 (91)
T 2lvc_A 83 ----ECAYFTVTI 91 (91)
T ss_dssp ----CEEEEEEEC
T ss_pred ----eEEEEEEEC
Confidence 455566554
No 481
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.28 E-value=1.1e-11 Score=94.80 Aligned_cols=86 Identities=16% Similarity=0.226 Sum_probs=65.5
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCC---CeEEEEeCCCCCCC----CCcc-----------cCcEEEEcCCCCC
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPS---ATIKWSKDNQEQLP----PNMI-----------AGETLIINGITKA 150 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~---~~v~W~~~~~~~~~----~~~~-----------~~~~L~i~~v~~~ 150 (471)
+.|.+...|..+.+.+|++++|.|. .+.|. +.|.|+|++..... .... ....|.|.+++.+
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 4567777888999999999999999 78887 89999997311111 0000 2468999999999
Q ss_pred CCeEEEEEEEecCCceeeeeEEEEEe
Q psy17058 151 DEGVYICSIQNAQGNVFQDYASIQVD 176 (471)
Q Consensus 151 D~G~Y~C~~~~~~~~~~~~~~~l~v~ 176 (471)
|+|.|+|.+.|..|. ....+.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~-~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKF-DCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCE-EEEEEEEEEE
T ss_pred cCEEEEEEEecCCCc-eEEEEEEEEe
Confidence 999999999999887 6666666663
No 482
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.27 E-value=1.1e-11 Score=89.47 Aligned_cols=77 Identities=22% Similarity=0.314 Sum_probs=62.3
Q ss_pred ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeee--ceEEEeccCCCCCeEEEEEEEcCCCceEEEEE
Q psy17058 190 SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQEL--GVLRFNNIATGDEGKYTCIAENSAGKEVMNAY 267 (471)
Q Consensus 190 ~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 267 (471)
...+.+|+.++|.|.+ .+ |.+.++|+|++..+....++.+...+ ..|.|.+++.+|+|.|+|.|. ..+.++.
T Consensus 5 ~v~~~~G~~v~l~C~v-s~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~----n~~~~a~ 78 (84)
T 2lu7_A 5 RVRSTPGGDLELVVHL-SG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAP----QDSRIFL 78 (84)
T ss_dssp CEEECTTSCEEEECCC-SC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECT----TTCEEEE
T ss_pred EEEEecCCCEEEEEEE-CC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEEC----CEEEEEE
Confidence 4567899999999998 55 88899999999988777777766543 369999999999999999984 4456667
Q ss_pred EEEEe
Q psy17058 268 IHVLT 272 (471)
Q Consensus 268 l~V~~ 272 (471)
|.|..
T Consensus 79 l~V~e 83 (84)
T 2lu7_A 79 VSVEE 83 (84)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 77753
No 483
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.27 E-value=9.1e-12 Score=93.67 Aligned_cols=85 Identities=25% Similarity=0.449 Sum_probs=67.8
Q ss_pred CCCcEEEcCCceeecCCCcEEEEee-CCCCCCeEEEEeCCCCCCCCCcc---------cCcEEEEcCCCCCCCeEEEEEE
Q psy17058 90 QANEVQVTPRQQSAPEGSQVTIECK-SNDPSATIKWSKDNQEQLPPNMI---------AGETLIINGITKADEGVYICSI 159 (471)
Q Consensus 90 ~~~~v~~~p~~~~v~~G~~v~l~C~-~~~p~~~v~W~~~~~~~~~~~~~---------~~~~L~i~~v~~~D~G~Y~C~~ 159 (471)
.+|.+...|....+.+|+++.|.|. .+.|.+.+.|+++ +..+..... ...+|.|.+++.+|+|.|+|.+
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 82 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCG-GRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEET-TEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEEC-CEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEE
Confidence 4677777788899999999999999 8888899999998 555542211 2368999999999999999999
Q ss_pred EecCCceeeeeEEEEEe
Q psy17058 160 QNAQGNVFQDYASIQVD 176 (471)
Q Consensus 160 ~~~~~~~~~~~~~l~v~ 176 (471)
.|..+. ......|.|.
T Consensus 83 ~n~~g~-~~~~~~l~V~ 98 (100)
T 3irg_A 83 GNEFGS-DSATVNIHIR 98 (100)
T ss_dssp EETTEE-EEEEEEEEEE
T ss_pred EeCCCc-EEEEEEEEEE
Confidence 998876 5555555553
No 484
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.27 E-value=2e-11 Score=115.06 Aligned_cols=103 Identities=25% Similarity=0.406 Sum_probs=67.9
Q ss_pred CceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCC----CceEEeeeceEEEeccCCCCCeEEEEEEEcCCCceEE
Q psy17058 189 ASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGP----DVEVYQELGVLRFNNIATGDEGKYTCIAENSAGKEVM 264 (471)
Q Consensus 189 ~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~----~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~ 264 (471)
....+.+|+.++|.|.+ .+ |.+.++|+++++.+.... ++.+ .+++|.|.+++.+|+|.|+|.|.|..|..+.
T Consensus 254 ~~v~v~~G~~~~l~C~~-~g-p~p~i~W~~~~~~~~~~~~~~~r~~~--~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~ 329 (361)
T 2xot_A 254 SAWEAHLGDTLTIRCDT-KQ-QGMTKVWVSPSNEQVLSQGSNGSVSV--RNGDLFFKKVQVEDGGVYTCYAMGETFNETL 329 (361)
T ss_dssp CCCEEETTCCEEECCCC-SS-TTCEEEEECTTSCBCCSCCSSSSEEE--ETTEEEESSCCTTSCEEEEEEEECSSCEEEE
T ss_pred cCceecCCCeEEEEeEe-eC-CCCeEEEEeCCCeeEeecccCCceEe--ecCeEEEeecCcccCEEEEEEEecCCCccEE
Confidence 34578899999999999 66 889999999877643322 3444 4778999999999999999999999999888
Q ss_pred EEEEEEEeCCceeeCCCccEEecCCCcEEEEEEEeecCCCeEE
Q psy17058 265 NAYIHVLTLPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVS 307 (471)
Q Consensus 265 ~~~l~V~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~ 307 (471)
.+.|.|...+ .+|+.+.|.|.+.|.|.|.|+
T Consensus 330 ~~~l~V~~~~------------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 330 SVELKVYNFT------------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEEEESSC------------CC-------------------
T ss_pred EEEEEEEeee------------ccCCceEEEEEeCCCCCCccc
Confidence 8888885422 568899999999999998763
No 485
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.27 E-value=2.5e-11 Score=89.09 Aligned_cols=83 Identities=16% Similarity=0.262 Sum_probs=62.9
Q ss_pred CeeeecCCCceeE--EcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeeec--eEEEeccCCCCCeEEEEEEE
Q psy17058 181 PRIRIHPNASQTF--IVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQELG--VLRFNNIATGDEGKYTCIAE 256 (471)
Q Consensus 181 p~~~~~~~~~~~v--~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C~~~ 256 (471)
|...+.|.....+ .+|+.++|.|.+ .+ |.+.++|+|+|..+..+.++.+...+. .|.|.+++.+|+|.|+|.|.
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v-~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEV-DR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEEC-SC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECS
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEE-CC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEc
Confidence 3334455544433 589999999998 44 778999999999988887777766543 69999999999999999995
Q ss_pred cCCCceEEEEEEE
Q psy17058 257 NSAGKEVMNAYIH 269 (471)
Q Consensus 257 ~~~~~~~~~~~l~ 269 (471)
| .+.++.|.
T Consensus 82 n----~~~~~~lt 90 (91)
T 2lvc_A 82 D----ECAYFTVT 90 (91)
T ss_dssp S----CEEEEEEE
T ss_pred c----eEEEEEEE
Confidence 4 34555554
No 486
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.26 E-value=9.6e-12 Score=92.61 Aligned_cols=82 Identities=24% Similarity=0.398 Sum_probs=67.2
Q ss_pred CccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcccccccCceeEEEEeecCCCCCeEEEEEEEcCCCceEEEEEE
Q psy17058 281 SEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLERDELTSRAVYTIASVRESDAGQYKCIGKNSAGTEEKVITV 360 (471)
Q Consensus 281 ~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 360 (471)
+....+.+|+++.|.|.+.+ .|.+.|++++..+...... ......|.|.+++.+|+|.|+|.|.|..|..+..+.|
T Consensus 8 p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 83 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRT--VLIGEYLQIKGATPRDSGLYACTAARTVDSETWIFMV 83 (95)
T ss_dssp CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSE--EEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceE--EEeCCEEEECcCCcccCEEEEEEEccCCCcEEEEEEE
Confidence 34567889999999999986 5799999999887543321 1234689999999999999999999999999999999
Q ss_pred EEecCC
Q psy17058 361 AVEHRP 366 (471)
Q Consensus 361 ~V~~~p 366 (471)
.|.+++
T Consensus 84 ~V~~~~ 89 (95)
T 4hwu_A 84 NVTDAA 89 (95)
T ss_dssp EECCC-
T ss_pred EEeCCc
Confidence 998764
No 487
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.26 E-value=2.3e-11 Score=92.07 Aligned_cols=92 Identities=13% Similarity=0.113 Sum_probs=71.7
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCC-CeEEEEeCCCCCCcCCCceEEeee--ceEEEeccCCCCCeEEEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPS-PTQTWIRPDNDGKFGPDVEVYQEL--GVLRFNNIATGDEGKYTCIA 255 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~-~~v~W~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~ 255 (471)
..|........+..+.+|+.++|.|.+ .+.|. +.+.|+|++..+....++.+...+ ..|.|.+++.+|+|.|+|.+
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~v-~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 84 (104)
T 2eny_A 6 SGHVGITKRLKTMEVLEGESCSFECVL-SHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSV 84 (104)
T ss_dssp CCCCCCSBCCCCEEEESSCCEEEEEEC-SSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEE
T ss_pred cCCCEEEecCCCcEEcCCCcEEEEEEE-cCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEE
Confidence 344444445567789999999999999 55553 589999999987777777766533 37999999999999999998
Q ss_pred EcCCCceEEEEEEEEEeCCc
Q psy17058 256 ENSAGKEVMNAYIHVLTLPA 275 (471)
Q Consensus 256 ~~~~~~~~~~~~l~V~~~p~ 275 (471)
+....++.|.|..+|.
T Consensus 85 ----~~~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 85 ----RGLTSKASLIVRERSG 100 (104)
T ss_dssp ----TTEEEEECEEEECCCS
T ss_pred ----CCeeEEEEEEEeCCCc
Confidence 4456788899987764
No 488
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.25 E-value=2.5e-11 Score=93.91 Aligned_cols=81 Identities=20% Similarity=0.244 Sum_probs=67.7
Q ss_pred cCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEE---------eeeceEEEeccCCCCCeEEEEEEEcCCCceEEE
Q psy17058 195 VGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVY---------QELGVLRFNNIATGDEGKYTCIAENSAGKEVMN 265 (471)
Q Consensus 195 ~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~---------~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 265 (471)
.+..+.|.|.+ .|.|.+.++|+|||..+....+.... ...+.|.|.++...|+|.|+|.|.|..|..+.+
T Consensus 14 ~~~~~~l~c~v-~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t 92 (126)
T 1he7_A 14 EMHHWCIPFSV-DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 92 (126)
T ss_dssp CCCEEEEEEEE-CCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE
T ss_pred cCccEEEEEEE-eeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE
Confidence 57789999999 89999999999999887665543322 124679999999999999999999999999999
Q ss_pred EEEEEEeCCce
Q psy17058 266 AYIHVLTLPAV 276 (471)
Q Consensus 266 ~~l~V~~~p~~ 276 (471)
+.|.|...|..
T Consensus 93 ~~l~v~~~P~~ 103 (126)
T 1he7_A 93 IMAAFMDNPFE 103 (126)
T ss_dssp EEECCCSCTTS
T ss_pred EEEEEEcCCCC
Confidence 99988877643
No 489
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.24 E-value=2.6e-11 Score=99.22 Aligned_cols=101 Identities=24% Similarity=0.339 Sum_probs=77.1
Q ss_pred ccCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEe---eeceEEEeccCCCCCeEEEEE
Q psy17058 178 REMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQ---ELGVLRFNNIATGDEGKYTCI 254 (471)
Q Consensus 178 ~~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~ 254 (471)
..+|.+...+ ....+.+|+.++|.|.+ .+.|.+.+.|+|++..+....++.+.. ....|.|.+++..|.|.|+|.
T Consensus 39 ~~~P~~~~~~-~~~~v~~G~~v~L~C~~-~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 116 (154)
T 1fhg_A 39 HVKPYFTKTI-LDMEVVEGSAARFDCKV-EGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCK 116 (154)
T ss_dssp CEEEEEEECC-CCEEEETTSCEEEEEEE-EEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCeEEccC-CcEEEeCCCeEEEEEEE-EEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEE
Confidence 3456555544 45678999999999999 788999999999998766665555542 134799999999999999999
Q ss_pred EEcCCCceEEEEEEEEEeCCceeeCC
Q psy17058 255 AENSAGKEVMNAYIHVLTLPAVTITP 280 (471)
Q Consensus 255 ~~~~~~~~~~~~~l~V~~~p~~~~~~ 280 (471)
+.|..|.....+.|.|..+|.+...+
T Consensus 117 a~N~~G~~~~~~~l~V~~~p~~~~~~ 142 (154)
T 1fhg_A 117 AVNSLGEATCTAELLVETMGKEGEGE 142 (154)
T ss_dssp EEETTEEEEEEEEEEEECC-------
T ss_pred EEECCCeEEEEEEEEEeCcCcCCCCC
Confidence 99999998889999999887765443
No 490
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=3e-12 Score=96.63 Aligned_cols=82 Identities=21% Similarity=0.311 Sum_probs=64.2
Q ss_pred CCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCcc------cccccCceeEEEEeecCCCCCeEEEEEEEcCCCc
Q psy17058 280 PSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNL------ERDELTSRAVYTIASVRESDAGQYKCIGKNSAGT 353 (471)
Q Consensus 280 ~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 353 (471)
+.....+.+|+.+.|.|.+.+.| +.+.|++++..+.... ..........|.|.+++.+|+|.|+|.|.|
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n---- 88 (101)
T 2edk_A 14 PLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG---- 88 (101)
T ss_dssp CCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSS----
T ss_pred cCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcC----
Confidence 34467899999999999999888 8999999998876432 222334456899999999999999999987
Q ss_pred eEEEEEEEEecCC
Q psy17058 354 EEKVITVAVEHRP 366 (471)
Q Consensus 354 ~~~~~~l~V~~~p 366 (471)
...++.|.|..+|
T Consensus 89 ~~~~~~l~V~~~P 101 (101)
T 2edk_A 89 GQCEAELIVEEKQ 101 (101)
T ss_dssp CEECCBEEEECCC
T ss_pred CcEEEEEEEeCCC
Confidence 4455667776653
No 491
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.24 E-value=4.5e-11 Score=91.21 Aligned_cols=92 Identities=17% Similarity=0.196 Sum_probs=69.0
Q ss_pred CCceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCcc-CCC---------ccc-ccccCceeEEEEeecCCCCCe
Q psy17058 273 LPAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAP-FDR---------NLE-RDELTSRAVYTIASVRESDAG 341 (471)
Q Consensus 273 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~-~~~---------~~~-~~~~~~~~~l~i~~~~~~d~G 341 (471)
.|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++.. +.. ... ........+|.|.+++.+|+|
T Consensus 6 ~p~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G 84 (108)
T 3m45_A 6 SQGQFPLT-QNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEG 84 (108)
T ss_dssp --CCCEEC-CCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCE
T ss_pred CCCccccC-CeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCe
Confidence 44444443 357889999999999999999899999997752 110 000 011125678999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEecCC
Q psy17058 342 QYKCIGKNSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 342 ~Y~C~a~n~~g~~~~~~~l~V~~~p 366 (471)
.|+|.|.| .|..+..+.|.|..+|
T Consensus 85 ~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 85 QYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp EEEEEECS-SSCEEEEEEEEEECCC
T ss_pred EEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 99999999 8888999999998754
No 492
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.24 E-value=6.8e-11 Score=87.28 Aligned_cols=82 Identities=22% Similarity=0.288 Sum_probs=64.7
Q ss_pred ecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeee--ceEEEeccCCCCCeEEEEEEEcCCCce
Q psy17058 185 IHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQEL--GVLRFNNIATGDEGKYTCIAENSAGKE 262 (471)
Q Consensus 185 ~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~ 262 (471)
..+..+..+.+|+.++|.|.+ .+ +.+.+.|+|+|..+....++.+...+ ..|.|.+++.+|+|.|+|.+.| .
T Consensus 9 ~~~~~~~~v~~G~~v~l~C~v-~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n----~ 82 (93)
T 1waa_A 9 EKPLYGVEVFVGETAHFEIEL-SE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN----T 82 (93)
T ss_dssp EECCCCEEEETTSCEEEEEEE-SS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT----E
T ss_pred eccCcceEEeCCCCEEEEEEE-CC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC----C
Confidence 444556789999999999999 44 45789999999887777777766543 3799999999999999999965 3
Q ss_pred EEEEEEEEEe
Q psy17058 263 VMNAYIHVLT 272 (471)
Q Consensus 263 ~~~~~l~V~~ 272 (471)
..++.|.|..
T Consensus 83 ~~sa~L~V~~ 92 (93)
T 1waa_A 83 KSAANLKVKE 92 (93)
T ss_dssp EEEEEEEEEC
T ss_pred cEEEEEEEEc
Confidence 4566777653
No 493
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=1.5e-11 Score=93.06 Aligned_cols=91 Identities=13% Similarity=0.142 Sum_probs=69.6
Q ss_pred eCCceeeCCCccEEecCCCcEEEEEEEeecCCC-eEEEEeCCccCCCccc--ccccCceeEEEEeecCCCCCeEEEEEEE
Q psy17058 272 TLPAVTITPSEYVSVRPGEPLTLECEATGRPMP-TVSWVKYIAPFDRNLE--RDELTSRAVYTIASVRESDAGQYKCIGK 348 (471)
Q Consensus 272 ~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~i~W~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 348 (471)
..|.....+.....+.+|+++.|.|.+.+.|.+ .+.|+|++..+....+ ........+|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 85 (104)
T 2eny_A 6 SGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVR 85 (104)
T ss_dssp CCCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEET
T ss_pred cCCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEEC
Confidence 344333444556789999999999999987754 8999999998864322 2223345689999999999999999984
Q ss_pred cCCCceEEEEEEEEecCC
Q psy17058 349 NSAGTEEKVITVAVEHRP 366 (471)
Q Consensus 349 n~~g~~~~~~~l~V~~~p 366 (471)
| ...++.|.|..+|
T Consensus 86 ~----~~~~a~L~V~~~p 99 (104)
T 2eny_A 86 G----LTSKASLIVRERS 99 (104)
T ss_dssp T----EEEEECEEEECCC
T ss_pred C----eeEEEEEEEeCCC
Confidence 4 6788899998876
No 494
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.23 E-value=3.6e-11 Score=95.81 Aligned_cols=83 Identities=20% Similarity=0.406 Sum_probs=66.7
Q ss_pred CCceeEEcCCeEEEEEEccCCCCCCeEEEEeCC----------------------------CCC-CcCCCceEEeee--c
Q psy17058 188 NASQTFIVGDRADIQCVLEAGEPSPTQTWIRPD----------------------------NDG-KFGPDVEVYQEL--G 236 (471)
Q Consensus 188 ~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~----------------------------~~~-~~~~~~~~~~~~--~ 236 (471)
+....+.+|+.++|.|.+ .+.|.+.++|+|++ ..+ ....++.+...+ .
T Consensus 25 p~~~~v~~G~~v~L~C~~-~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s 103 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPI-SGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRS 103 (139)
T ss_dssp CCEEEESSSSCCCCEEEC-CSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEE
T ss_pred CCCEEEeCCCeEEEEEEE-EEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEE
Confidence 346678899999999999 89999999999998 332 123344444322 3
Q ss_pred eEEEeccCCCCCeEEEEEEEcCCCceEEEEEEEEE
Q psy17058 237 VLRFNNIATGDEGKYTCIAENSAGKEVMNAYIHVL 271 (471)
Q Consensus 237 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 271 (471)
.|.|.++...|+|.|+|.|.|..|....++.|.|.
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 69999999999999999999999998888888774
No 495
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=1.4e-11 Score=95.29 Aligned_cols=97 Identities=18% Similarity=0.160 Sum_probs=75.3
Q ss_pred cCCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEe---eeceEEEeccCCCCCeEEEEEE
Q psy17058 179 EMPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQ---ELGVLRFNNIATGDEGKYTCIA 255 (471)
Q Consensus 179 ~~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~ 255 (471)
.+|...........+.+|+.++|.|.+ .+.|.+.+.|+|++..+....++.+.. ....|.|.+++.+|+|.|+|.+
T Consensus 11 ~~p~~~~~~~~~~~v~~G~~v~l~C~~-~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 89 (115)
T 2cr6_A 11 GRRVHIIEDLEDVDVQEGSSATFRCRI-SPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA 89 (115)
T ss_dssp SSCCEEEECCCEEEEETTSCEECCCEE-ESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE
T ss_pred CCCCeEeccCccEEEeCCCcEEEEEEE-cCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE
Confidence 444334444566788999999999999 688888999999998766665555441 2347999999999999999995
Q ss_pred EcCCCceEEEEEEEEEeCCceeeCC
Q psy17058 256 ENSAGKEVMNAYIHVLTLPAVTITP 280 (471)
Q Consensus 256 ~~~~~~~~~~~~l~V~~~p~~~~~~ 280 (471)
+.....+.|.|..+|.+...+
T Consensus 90 ----g~~~~~~~L~V~~~p~~~~~~ 110 (115)
T 2cr6_A 90 ----GDQRASAALRVTEKPSVFSRS 110 (115)
T ss_dssp ----TTEECCEEEEEECCSSCCSSS
T ss_pred ----CCeeEEEEEEEECCCceeccC
Confidence 667777899999888765544
No 496
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.23 E-value=1.1e-10 Score=87.63 Aligned_cols=90 Identities=18% Similarity=0.209 Sum_probs=71.2
Q ss_pred CCeeeecCCCceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeee--ceEEEeccCCCCCeEEEEEEEc
Q psy17058 180 MPRIRIHPNASQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQEL--GVLRFNNIATGDEGKYTCIAEN 257 (471)
Q Consensus 180 ~p~~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~ 257 (471)
+|.+...+.....+.+|+.++|.|.+ . .|.+.+.|+|++..+....++.+...+ ..|.|.++..+|+|.|+|.+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~-~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVEL-A-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEE-S-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEe-c-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 45555554444567899999999999 4 688899999999887766676665533 36999999999999999999
Q ss_pred CCCceEEEEEEEEEeCCc
Q psy17058 258 SAGKEVMNAYIHVLTLPA 275 (471)
Q Consensus 258 ~~~~~~~~~~l~V~~~p~ 275 (471)
+....++.|.|..+|.
T Consensus 83 --g~~~~~~~l~V~~~P~ 98 (100)
T 2yuv_A 83 --GDEKCSTELFVRSGPS 98 (100)
T ss_dssp --TTEEEEEEEEECCSCC
T ss_pred --CCceEEEEEEEecCCC
Confidence 6677788888887663
No 497
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=1.7e-11 Score=92.84 Aligned_cols=87 Identities=24% Similarity=0.353 Sum_probs=67.7
Q ss_pred CceeeCCCccEEecCCCcEEEEEEEeecCCCeEEEEeCCccCCCccc--ccccCceeEEEEeecCCCCCeEEEEEEEcCC
Q psy17058 274 PAVTITPSEYVSVRPGEPLTLECEATGRPMPTVSWVKYIAPFDRNLE--RDELTSRAVYTIASVRESDAGQYKCIGKNSA 351 (471)
Q Consensus 274 p~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 351 (471)
|.+... .....+.+|+++.|.|.+.+ |.+.+.|++++..+..... .........|.|.+++.+|+|.|+|.|.|
T Consensus 9 p~~~~~-~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n-- 84 (103)
T 2edf_A 9 AAIIKP-LEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA-- 84 (103)
T ss_dssp CCEEEC-CCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS--
T ss_pred cEEEec-CCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc--
Confidence 334333 34578999999999999996 7789999999988754322 12233456899999999999999999999
Q ss_pred CceEEEEEEEEecCC
Q psy17058 352 GTEEKVITVAVEHRP 366 (471)
Q Consensus 352 g~~~~~~~l~V~~~p 366 (471)
...++.|.|..+|
T Consensus 85 --~~~~~~l~V~~~p 97 (103)
T 2edf_A 85 --SKSTASLHVEEKA 97 (103)
T ss_dssp --CEEEEEEEECCCS
T ss_pred --CCcEEEEEEeCCC
Confidence 4677888888765
No 498
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=8.5e-11 Score=90.57 Aligned_cols=96 Identities=18% Similarity=0.301 Sum_probs=74.6
Q ss_pred cCCeeeecCCC--ceeEEcCCeEEEEEEccCCCCCCeEEEEeCCCCCCcCCCceEEeee--ceEEEeccCCCCCeEEEEE
Q psy17058 179 EMPRIRIHPNA--SQTFIVGDRADIQCVLEAGEPSPTQTWIRPDNDGKFGPDVEVYQEL--GVLRFNNIATGDEGKYTCI 254 (471)
Q Consensus 179 ~~p~~~~~~~~--~~~v~~g~~~~L~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~ 254 (471)
.+|.....+.. ...+.+|+.+.|.|.+ . .|.+.+.|+|++..+....++.+...+ ..|.|.+++.+|+|.|+|.
T Consensus 9 ~pp~~~~~p~~~~~~~~~~G~~v~L~C~~-~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (113)
T 2cpc_A 9 DVSSWIVYPSGKVYVAAVRLERVVLTCEL-C-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCE 86 (113)
T ss_dssp SCSCSEEESCSCEEEEEETTCCEEEEEEE-S-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEE
T ss_pred cCCcEEEccCCceeEEEEcCCeEEEEEEe-c-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEE
Confidence 44554444433 2457799999999999 4 788899999999877666666665533 5799999999999999999
Q ss_pred EEcCCCceEEEEEEEEEeCCceeeCC
Q psy17058 255 AENSAGKEVMNAYIHVLTLPAVTITP 280 (471)
Q Consensus 255 ~~~~~~~~~~~~~l~V~~~p~~~~~~ 280 (471)
+.| .+..+.|.|..+|...+.+
T Consensus 87 a~n----~~~~~~l~V~~~p~~~~~p 108 (113)
T 2cpc_A 87 IDD----ESASFTVTVTEPPVRIIYS 108 (113)
T ss_dssp SSS----CEEEEEEEEECCCCCCCCC
T ss_pred Eec----CcEEEEEEEecCCchhccC
Confidence 987 5677889999888766554
No 499
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=4.8e-11 Score=91.34 Aligned_cols=92 Identities=15% Similarity=0.190 Sum_probs=68.4
Q ss_pred CeeeecCCCceeEEcCCeEEEEEEccCC--CCCCeEEEEeCCCCCCc----CCCceEEe--------eeceEEEeccCCC
Q psy17058 181 PRIRIHPNASQTFIVGDRADIQCVLEAG--EPSPTQTWIRPDNDGKF----GPDVEVYQ--------ELGVLRFNNIATG 246 (471)
Q Consensus 181 p~~~~~~~~~~~v~~g~~~~L~C~~~~~--~p~~~v~W~~~~~~~~~----~~~~~~~~--------~~~~l~i~~~~~~ 246 (471)
+.+.+..+.+..+.+|+.++|.|.+... .|.+.|+|||+... .. ..++.+.. ....|.|.++...
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 90 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWL-ELGSKSGARFSFKESHNSASNVYTVELHIGKVVLG 90 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTC-CCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEe-ccCCCCccEEEeccccccccccceEEEEEeeCChh
Confidence 3334444567789999999999998322 37899999996421 11 12333321 1467999999999
Q ss_pred CCeEEEEEEEcCCCceEEEEEEEEEeC
Q psy17058 247 DEGKYTCIAENSAGKEVMNAYIHVLTL 273 (471)
Q Consensus 247 d~G~Y~C~~~~~~~~~~~~~~l~V~~~ 273 (471)
|+|.|+|++.|..+..+..+.|.|..+
T Consensus 91 D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 91 DRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp TCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred hCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 999999999999999999999998763
No 500
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.22 E-value=6.6e-11 Score=98.31 Aligned_cols=162 Identities=14% Similarity=0.224 Sum_probs=99.3
Q ss_pred CCcEEEcCCceeecCCCcEEEEeeCCCCCCe-EEEEeCCCCCCCCCcccCcEEEEcCCCCCCCeEEEEEEEecCCceeee
Q psy17058 91 ANEVQVTPRQQSAPEGSQVTIECKSNDPSAT-IKWSKDNQEQLPPNMIAGETLIINGITKADEGVYICSIQNAQGNVFQD 169 (471)
Q Consensus 91 ~~~v~~~p~~~~v~~G~~v~l~C~~~~p~~~-v~W~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~ 169 (471)
+..+.+.|+...|..|+++.|.|..+-+.+. +.|.-.-+....+.......|.|.+++ |.|.|.|.+.-.... ...
T Consensus 2 ~f~v~v~P~~~~V~~G~S~~l~Cs~~c~~p~~~glet~l~~~~~~~g~~w~~l~l~~vs--~~g~~~C~~~c~~~~-~~~ 78 (192)
T 1zxq_A 2 VFEVHVRPKKLAVEPKGSLEVNCSTTCNQPEVGGLETSLNKILLDEQAQWKHYLVSNIS--HDTVLQCHFTCSGKQ-ESM 78 (192)
T ss_dssp CCCEEEESSEEEECTTEEEEEEEEESCSSCSEEEEECSSEEEEEEEETTEEEEEEEEEC--SCEEEEEEEEETTEE-EEE
T ss_pred CcEEEEeCCCcEEeCCCcEEEEEECCCCCccccccccccCceEEcCCCCeEEEEEeccc--cCCeeEEEEECCCcc-eEE
Confidence 4568889999999999999999993334443 455322011100001122579999999 789999999865433 444
Q ss_pred eEEEEEeeccCCe-eeecCCCceeEEcCCeEEEEEEccCCCCCC--eEEEEeCCCCCCcCC----CceEEeeeceEEEec
Q psy17058 170 YASIQVDKREMPR-IRIHPNASQTFIVGDRADIQCVLEAGEPSP--TQTWIRPDNDGKFGP----DVEVYQELGVLRFNN 242 (471)
Q Consensus 170 ~~~l~v~~~~~p~-~~~~~~~~~~v~~g~~~~L~C~~~~~~p~~--~v~W~~~~~~~~~~~----~~~~~~~~~~l~i~~ 242 (471)
.+.|.|. .+|. +.+.+. ...+.+|+.++|.|.+.++.|.. ++.|++++..+.... .........++.+ .
T Consensus 79 ~~~itVy--~~P~~v~i~~~-p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~~~f~~~~~~~~~~tv~~~~-~ 154 (192)
T 1zxq_A 79 NSNVSVY--QPPRQVILTLQ-PTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNS-T 154 (192)
T ss_dssp EEEEEEC--BCCCCCEEEEE-SSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEEECCSSTTCTTCEEEEEEE-E
T ss_pred EEEEEEE--eCCCCceEccC-CccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeeecccccccCcCcceEEEEEE-e
Confidence 5555554 4443 333321 22577999999999997778876 489999776542211 0000010112333 4
Q ss_pred cCCCCCe-EEEEEEEcCC
Q psy17058 243 IATGDEG-KYTCIAENSA 259 (471)
Q Consensus 243 ~~~~d~G-~Y~C~~~~~~ 259 (471)
+.++|.| .|+|+|....
T Consensus 155 ~~r~D~g~~~sC~A~L~L 172 (192)
T 1zxq_A 155 ADREDGHRNFSCLAVLDL 172 (192)
T ss_dssp CCGGGGGCEEEEEEEEEC
T ss_pred cchhhCCceEEEEEEecC
Confidence 5555666 9999998655
Done!