Query psy17060
Match_columns 234
No_of_seqs 164 out of 1152
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 20:51:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17060.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17060hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01387 MYSc_type_XV Myosin mo 100.0 9.5E-58 2.1E-62 434.8 13.2 219 1-234 375-605 (677)
2 cd01384 MYSc_type_XI Myosin mo 100.0 1.3E-57 2.9E-62 433.2 13.4 207 2-234 382-600 (674)
3 PTZ00014 myosin-A; Provisional 100.0 1.2E-57 2.6E-62 439.6 13.0 208 1-234 476-696 (821)
4 cd01385 MYSc_type_IX Myosin mo 100.0 1.7E-57 3.7E-62 434.0 12.9 215 3-234 393-619 (692)
5 cd01383 MYSc_type_VIII Myosin 100.0 4.2E-57 9.2E-62 430.0 13.0 218 1-234 379-606 (677)
6 cd01381 MYSc_type_VII Myosin m 100.0 4E-57 8.6E-62 430.2 12.4 209 1-234 376-597 (671)
7 COG5022 Myosin heavy chain [Cy 100.0 2.6E-57 5.6E-62 441.6 10.2 213 2-234 443-663 (1463)
8 cd01382 MYSc_type_VI Myosin mo 100.0 8.2E-57 1.8E-61 430.7 13.3 213 1-234 411-645 (717)
9 cd01378 MYSc_type_I Myosin mot 100.0 8.5E-57 1.8E-61 428.5 12.9 207 1-234 380-600 (674)
10 cd01380 MYSc_type_V Myosin mot 100.0 1.5E-56 3.3E-61 427.8 12.3 224 1-234 382-619 (691)
11 cd01377 MYSc_type_II Myosin mo 100.0 3E-56 6.6E-61 425.8 13.1 218 1-234 388-620 (693)
12 smart00242 MYSc Myosin. Large 100.0 1.4E-55 3E-60 421.3 13.1 208 1-234 383-603 (677)
13 cd00124 MYSc Myosin motor doma 100.0 3.8E-55 8.3E-60 418.9 12.9 219 1-234 376-607 (679)
14 cd01379 MYSc_type_III Myosin m 100.0 4.7E-53 1E-57 401.0 12.0 185 1-234 387-583 (653)
15 KOG0164|consensus 100.0 3.4E-53 7.4E-58 388.6 9.0 209 1-233 389-616 (1001)
16 cd01386 MYSc_type_XVIII Myosin 100.0 1E-52 2.2E-57 403.8 12.0 225 2-234 394-689 (767)
17 PF00063 Myosin_head: Myosin h 100.0 1.5E-52 3.2E-57 403.2 10.2 227 1-234 378-624 (689)
18 KOG0162|consensus 100.0 3.6E-51 7.9E-56 375.7 9.4 217 1-233 397-616 (1106)
19 KOG0161|consensus 100.0 1.7E-45 3.7E-50 372.4 10.4 216 2-234 463-695 (1930)
20 KOG0160|consensus 100.0 1.3E-43 2.9E-48 337.7 8.8 206 2-234 383-600 (862)
21 KOG0163|consensus 100.0 7.4E-42 1.6E-46 315.2 10.8 207 2-230 466-694 (1259)
22 KOG4229|consensus 100.0 1.1E-31 2.4E-36 261.7 6.7 163 2-170 442-609 (1062)
23 smart00394 RIIa RIIalpha, Regu 25.9 48 0.001 19.4 1.4 15 4-19 21-35 (38)
No 1
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=100.00 E-value=9.5e-58 Score=434.82 Aligned_cols=219 Identities=26% Similarity=0.362 Sum_probs=190.6
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
+.||||||||||||||||++|++++|+.|+++|.+|||+|..|+|.||++|+|||+++|.|||+||||||++|+++
T Consensus 375 ~~NsfEQLcINyaNEkLQ~~f~~~vF~~eq~eY~~EgI~~~~i~f~dN~~~ldLi~~kp~Gil~lLdee~~~p~~t---- 450 (677)
T cd01387 375 SFNSFEQLCINYANENLQYLFNKIVFQEEQEEYIREQLDWTEIAFADNQPVINLISLKPYGILRILDDQCCFPQAT---- 450 (677)
T ss_pred CCCCHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCcCChHHHHHHHhcCCCchHHHHHHHhcCCCCc----
Confidence 4699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhccccCCCCCccccc----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCccc
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCVF----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPVA 156 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~~----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~~ 156 (234)
|++|++|++..+++|+.|..+. .|++.||||+|+| +++||++||+|.++++++++|+.|++++|+.||+.....
T Consensus 451 -d~~~~~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~~~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~ 528 (677)
T cd01387 451 -DHTFLQKCHYHHGANPLYSKPKMPLPEFTIKHYAGKVTY-QVHKFLDKNHDQVRQDVLDLFVSSRTRVVAHLFSSHAAQ 528 (677)
T ss_pred -hHHHHHHHHHhccCCccccCCCCCCCeeEEEEeCceeee-cCCChHHhccchhhHHHHHHHHhCCcHHHHHHHhhhhcc
Confidence 9999999999999998886542 4799999999999 999999999999999999999999999999999754322
Q ss_pred hhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhhcc
Q psy17060 157 VFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNALS 228 (234)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~~~ 228 (234)
.... ..+..+.|++.++......+|+++|++||++| ||||||..+.|+.||...|..||+++|
T Consensus 529 ~~~~---------~~~~~s~~~~~~~~~tv~~~f~~sL~~L~~~l~~t~phfIRCIKPN~~k~~~~Fd~~~V~~QLr~~G 599 (677)
T cd01387 529 RAPK---------RLGKSSSGTRLYKAHTVAAKFQQSLLDLVEKMERCNPLFVRCLKPNHKKEPGLFEPDVVMAQLRYSG 599 (677)
T ss_pred cccc---------cccCCCccccccCCCcHHHHHHHHHHHHHHHHhcCCCeEEEEECCCCcCCccccChHHHHHHHHHhc
Confidence 1100 00011122222233344678888999999888 999999999999999999999999999
Q ss_pred hhhhhC
Q psy17060 229 LVKIIE 234 (234)
Q Consensus 229 i~~~~~ 234 (234)
|+|+|+
T Consensus 600 vlE~vr 605 (677)
T cd01387 600 VLETVR 605 (677)
T ss_pred hHHHHH
Confidence 999874
No 2
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=100.00 E-value=1.3e-57 Score=433.24 Aligned_cols=207 Identities=27% Similarity=0.345 Sum_probs=187.0
Q ss_pred CccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhcccccccc
Q psy17060 2 SLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAIL 81 (234)
Q Consensus 2 ~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~~ 81 (234)
.||||||||||||||||++|++++|+.|+++|.+|||+|+.|+|.||++|+|||+++|.|||++|||||++|+++
T Consensus 382 ~NsfEQLcINyaNEkLQ~~f~~~if~~eq~eY~~EgI~~~~i~~~DN~~~ldLie~~~~Gil~lLdee~~~p~~t----- 456 (674)
T cd01384 382 TNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKST----- 456 (674)
T ss_pred cCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccCCChHHHHHHHhcCCccHHHHHHHHHcCCCCC-----
Confidence 699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhccccCCCCCccccc----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCccch
Q psy17060 82 NSRTIRCVCSWSRGNPMVSCVF----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPVAV 157 (234)
Q Consensus 82 d~~fl~kl~~~~~~~~~~~~~~----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~~~ 157 (234)
|++|++||++++++|++|..+. .|++.||||+|+| +++||++||+|.++++++++|+.|++++|+.||+.....+
T Consensus 457 d~~f~~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~v~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~ 535 (674)
T cd01384 457 HETFAQKLYQTFKDHKRFEKPKLSRTAFTIDHYAGDVTY-QTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEET 535 (674)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCeeEEEEecceeee-cCCCHHHhcCCcccHHHHHHHHhCchHHHHHHhccccccc
Confidence 9999999999999999886543 4789999999999 9999999999999999999999999999999998653321
Q ss_pred hhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhhcch
Q psy17060 158 FRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNALSL 229 (234)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~~~i 229 (234)
.+. ++..+...+|+.+|++||++| ||||||..+.|+.||...|..||++.||
T Consensus 536 ------------------~~~--~k~~tv~~~fk~~L~~L~~~L~~t~~hfIRCIKPN~~k~p~~fd~~~V~~QLr~~Gv 595 (674)
T cd01384 536 ------------------SKS--SKFSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGV 595 (674)
T ss_pred ------------------ccc--cccccHHHHHHHHHHHHHHHHhccCCeEEEEeCCCcccCCCccCHHHHHHHHHHcch
Confidence 000 111223456777999999988 9999999999999999999999999999
Q ss_pred hhhhC
Q psy17060 230 VKIIE 234 (234)
Q Consensus 230 ~~~~~ 234 (234)
+|+|+
T Consensus 596 lE~ir 600 (674)
T cd01384 596 LEAIR 600 (674)
T ss_pred HHHHH
Confidence 99874
No 3
>PTZ00014 myosin-A; Provisional
Probab=100.00 E-value=1.2e-57 Score=439.58 Aligned_cols=208 Identities=24% Similarity=0.277 Sum_probs=186.9
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
..||||||||||||||||++|++++|+.|+++|.+|||+|..|+|.||++|||||++||.|||++|||||++|++|
T Consensus 476 ~~NSfEQLcINy~NEkLQq~F~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~idLie~k~~GIl~lLDEec~~p~~t---- 551 (821)
T PTZ00014 476 KNNSLEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTEELEYTSNESVIDLLCGKGKSVLSILEDQCLAPGGT---- 551 (821)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCcHHHHHHHhcCCccHHHHHHHHhCCCCCC----
Confidence 3699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhccccCCCCCccccc-----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCcc
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCVF-----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPV 155 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~~-----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~ 155 (234)
|++|++||++++++|+.|..+. .|.+.||||+|+| +++||++||+|.++++++.+|++|++++|+.||.+...
T Consensus 552 -D~~f~~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~V~Y-~~~gfleKNkD~l~~~~~~ll~~S~n~~i~~lf~~~~~ 629 (821)
T PTZ00014 552 -DEKFVSSCNTNLKNNPKYKPAKVDSNKNFVIKHTIGDIQY-CASGFLFKNKDVLRPELVEVVKASPNPLVRDLFEGVEV 629 (821)
T ss_pred -HHHHHHHHHHHhcCCCCccCCCCCCCCceEEEEeceeeee-ccCcHHHhccccchHHHHHHHHhCccHHHHHHhccccc
Confidence 9999999999999999886542 4789999999999 99999999999999999999999999999999976432
Q ss_pred chhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhhc
Q psy17060 156 AVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNAL 227 (234)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~~ 227 (234)
.. +. .++......+|+.+|++||++| ||||||..+.|+.||...|..||+++
T Consensus 630 ~~-----------~~---------~~k~~tv~s~Fk~qL~~Lm~~L~~t~phfIRCIKPN~~k~p~~fd~~~V~~QLr~~ 689 (821)
T PTZ00014 630 EK-----------GK---------LAKGQLIGSQFLNQLDSLMSLINSTEPHFIRCIKPNENKKPLDWNSSKVLIQLHSL 689 (821)
T ss_pred cc-----------cc---------ccCCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCcCcccCccccchHhHHHHhhhh
Confidence 11 10 0111223456777999999888 99999999999999999999999999
Q ss_pred chhhhhC
Q psy17060 228 SLVKIIE 234 (234)
Q Consensus 228 ~i~~~~~ 234 (234)
||+|.|+
T Consensus 690 GvLE~ir 696 (821)
T PTZ00014 690 SILEALQ 696 (821)
T ss_pred hHHHHHH
Confidence 9999874
No 4
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=100.00 E-value=1.7e-57 Score=433.95 Aligned_cols=215 Identities=38% Similarity=0.623 Sum_probs=188.9
Q ss_pred ccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhcccccccch
Q psy17060 3 LLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAILN 82 (234)
Q Consensus 3 NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~~d 82 (234)
||||||||||||||||++|++++|+.|+++|.+|||+|..|+|.||++|||||++||.|||++|||||++|+++ |
T Consensus 393 NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~f~dN~~~ldLie~k~~Gil~lLdee~~~p~~t-----d 467 (692)
T cd01385 393 NSFEQLCINYANEQLQYYFNQHIFKLEQEEYQGEGITWTNIEYTDNVGCIQLFSKKPTGLLYLLDEESNFPHAT-----S 467 (692)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHhcCCCCC-----H
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred hHHHHHhccccCCCCCccccc----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCccchh
Q psy17060 83 SRTIRCVCSWSRGNPMVSCVF----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPVAVF 158 (234)
Q Consensus 83 ~~fl~kl~~~~~~~~~~~~~~----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~~~~ 158 (234)
++|++|+++.+++++.|..+. .|.+.||||+|+| +++||++||+|.++++++++|+.|++++|+.||+....+..
T Consensus 468 ~~~l~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~ 546 (692)
T cd01385 468 QTLLAKFNQQHKDNKYYEGPQVKEPAFIIQHYAGKVKY-QIKDFREKNMDLMRQDIVALLKGSDSSYVRELIGMDPVAVF 546 (692)
T ss_pred HHHHHHHHHHhCCCCCccCCCCCCCeEEEEEecceeee-cCCCHHHhccccccHHHHHHHHhCccHHHHHHhccCccccc
Confidence 999999999999998885542 4799999999999 99999999999999999999999999999999986554432
Q ss_pred hhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhhcchh
Q psy17060 159 RWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNALSLV 230 (234)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~~~i~ 230 (234)
+.+..++..++ ........+|+.+|++||.+| ||||||..+.|+.||...|..||+++||+
T Consensus 547 ~~~~~~~~~~~-----------~~~~tV~~~f~~~L~~L~~~L~~t~~hfIRCIKPN~~k~p~~Fd~~~V~~QLr~~Gvl 615 (692)
T cd01385 547 RWAVLRAAFRA-----------MAAPSVSAQFQTSLNKLMETLGKAEPFFIRCIKSNAEKIENCFDDELVLRQLRYTGML 615 (692)
T ss_pred ccccccccccC-----------ccCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCCccCcCccCHHHHHHHHHhhchH
Confidence 21111111110 111233557778999999998 99999999999999999999999999999
Q ss_pred hhhC
Q psy17060 231 KIIE 234 (234)
Q Consensus 231 ~~~~ 234 (234)
|+|+
T Consensus 616 E~ir 619 (692)
T cd01385 616 ETVR 619 (692)
T ss_pred HHHH
Confidence 9874
No 5
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=100.00 E-value=4.2e-57 Score=430.02 Aligned_cols=218 Identities=25% Similarity=0.375 Sum_probs=186.3
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
..||||||||||||||||++|++++|+.|+++|.+|||+|..|+|.||++|+|||+++|.|||++|||||++|+++
T Consensus 379 ~~NsfEQLcINyaNEkLQ~~f~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLdee~~~p~~t---- 454 (677)
T cd01383 379 DKNSFEQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFEDNQECLDLFEKKPLGLLSLLDEESTFPNAT---- 454 (677)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHHcCCCCC----
Confidence 3699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhccccCCCCCccccc--cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCccchh
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCVF--WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPVAVF 158 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~~--~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~~~~ 158 (234)
|++|++|+++++++|+.|.... .|++.||||+|+| +++||++||+|.++++++++|++|++++++ +|.....+..
T Consensus 455 -D~~f~~kl~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~v~gfleKNrD~l~~~~~~ll~~S~~~~~~-~f~~~~~~~s 531 (677)
T cd01383 455 -DLTFANKLKQHLKTNSCFRGERGGAFTVRHYAGEVTY-DTTGFLEKNRDLLHSDSIQLLSSCKCQLPQ-LFASSMLIQS 531 (677)
T ss_pred -HHHHHHHHHHHhCCCCCCCCCCCCceEEEEeccceee-cCCChHHhccccccHHHHHHHHhCchHHHH-HHHhhhhccc
Confidence 9999999999999999886543 5799999999999 999999999999999999999999999876 6653221110
Q ss_pred hhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhhcchh
Q psy17060 159 RWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNALSLV 230 (234)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~~~i~ 230 (234)
. . .+.. ...+...++......+|+++|++||++| ||||||..+.|+.||...|..||++.||+
T Consensus 532 ~--~-----~~~~--~~~~~~~~~~~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN~~k~p~~fd~~~V~~QLr~~Gvl 602 (677)
T cd01383 532 P--V-----VGPL--YVASAADSQKLSVGTKFKGQLFKLMQQLENTTPHFIRCIKPNNKQLPGIYEQGLVLQQLRCCGVL 602 (677)
T ss_pred c--c-----cccc--cccccccccCcchHHHHHHHHHHHHHHHhCCCCeEEEEECcccccCcCccchhhhHHHhhhccHH
Confidence 0 0 0000 0011111222334567788999999998 99999999999999999999999999999
Q ss_pred hhhC
Q psy17060 231 KIIE 234 (234)
Q Consensus 231 ~~~~ 234 (234)
|+|+
T Consensus 603 E~ir 606 (677)
T cd01383 603 EVVR 606 (677)
T ss_pred HHHH
Confidence 9974
No 6
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=100.00 E-value=4e-57 Score=430.21 Aligned_cols=209 Identities=25% Similarity=0.318 Sum_probs=187.8
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
..||||||||||||||||++|++++|+.|+++|.+|||+|..|+|.||++|+|||+++|.|||++|||||++|+++
T Consensus 376 ~~NsfEQLcINy~NEkLQ~~f~~~vf~~eq~eY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLDee~~~p~~t---- 451 (671)
T cd01381 376 DVNSFEQLCINFANENLQQFFVQHIFKLEQEEYNLEHINWQHIEFVDNQDALDLIAIKPLNIMSLIDEESKFPKGT---- 451 (671)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccCccCcHHHHHHHhcCCCCcceechHhhcCCCCC----
Confidence 3699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhccccCCCCCccccc-----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCcc
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCVF-----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPV 155 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~~-----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~ 155 (234)
|++|++|+++.+++|+.|..+. .|++.||||+|+| +++||++||+|.++++++++|+.|+|++|+.||+....
T Consensus 452 -d~~f~~kl~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~ 529 (671)
T cd01381 452 -DQTMLEKLHSQHGLHSNYLKPKSTQETQFGINHFAGVVFY-DTRGFLEKNRDTFSGDLSQLVQSSKNKFLKQIFQADVE 529 (671)
T ss_pred -HHHHHHHHHHHhcCCCCcccCCCCCCCceEEEEecceEee-ccCCHHHhccchhhHHHHHHHHhChHHHHHHHhccccc
Confidence 9999999999999999886432 4889999999999 99999999999999999999999999999999986532
Q ss_pred chhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhhc
Q psy17060 156 AVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNAL 227 (234)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~~ 227 (234)
.. .+. .++......+|+.+|+.||++| ||||||..+.|+.||...|..||+++
T Consensus 530 ~~------------------~~~-~~k~~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN~~k~~~~fd~~~V~~QLr~~ 590 (671)
T cd01381 530 MG------------------AET-RKKKPTLSSQFRRSLDLLMRTLSSCQPFFIRCIKPNEYKEPMVFDRELCVRQLRYS 590 (671)
T ss_pred cc------------------ccc-cccCCcHHHHHHHHHHHHHHHHhcCCCeEEEEeCcchhhccCccChHHHHHHHHhc
Confidence 11 000 1122333566777999999988 99999999999999999999999999
Q ss_pred chhhhhC
Q psy17060 228 SLVKIIE 234 (234)
Q Consensus 228 ~i~~~~~ 234 (234)
||+|+|+
T Consensus 591 Gvle~ir 597 (671)
T cd01381 591 GMMETIR 597 (671)
T ss_pred chHHHHH
Confidence 9999874
No 7
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=100.00 E-value=2.6e-57 Score=441.64 Aligned_cols=213 Identities=28% Similarity=0.449 Sum_probs=181.6
Q ss_pred CccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhc-CCCchhhhhHHHhhhhccccccc
Q psy17060 2 SLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 2 ~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~-~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
+|||||||||||||||||+|++|+|+.|||+|.+|||+|++|+|.||++|||||++ .|.|||++|||||.+|.++
T Consensus 443 kNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~at---- 518 (1463)
T COG5022 443 KNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHAT---- 518 (1463)
T ss_pred cCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCC----
Confidence 69999999999999999999999999999999999999999999999999999996 2679999999999999999
Q ss_pred chhHHHHHhccccC--CCCCccccc----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCc
Q psy17060 81 LNSRTIRCVCSWSR--GNPMVSCVF----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADP 154 (234)
Q Consensus 81 ~d~~fl~kl~~~~~--~~~~~~~~~----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~ 154 (234)
|++|..||.+.+. .++.|..++ .|++.||||+|+| +++||++||+|+++.+++.|+..|+|+||..||.+..
T Consensus 519 -d~s~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAgDVeY-~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~ 596 (1463)
T COG5022 519 -DESFTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAGDVEY-DVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEE 596 (1463)
T ss_pred -chHHHHHHHHHhccccCccccccccCCCceEEEeeccccee-eccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhh
Confidence 9999999998775 466675332 4789999999999 9999999999999999999999999999999998322
Q ss_pred cchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc-ccCCCCCCCCCCCccccchhhhhhhcchhhhh
Q psy17060 155 VAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE-ACTPEVPGSIPGGVEVFSASGVRNALSLVKII 233 (234)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l-rci~pn~~~~p~~fD~~~v~~Ql~~~~i~~~~ 233 (234)
... ...+++++|+++|+++++ ++.+|..-..|. |||+||..+.|..||..-|.+||+++||+|.|
T Consensus 597 ~~~-----------~K~~~pT~gs~~K~sl~~---Lm~tl~sTqphyIRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~I 662 (1463)
T COG5022 597 NIE-----------SKGRFPTLGSRFKESLNS---LMSTLNSTQPHYIRCIKPNEEKSPWTFDNQMVLSQLRCCGVLETI 662 (1463)
T ss_pred hcc-----------ccCCCCcHHHHHHHHHHH---HHHHHHhcCCceeEeeCCCcccCccccchHHHHHHHHhcchhhhe
Confidence 111 223566777766655431 112222222332 99999999999999999999999999999998
Q ss_pred C
Q psy17060 234 E 234 (234)
Q Consensus 234 ~ 234 (234)
+
T Consensus 663 R 663 (1463)
T COG5022 663 R 663 (1463)
T ss_pred e
Confidence 5
No 8
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=100.00 E-value=8.2e-57 Score=430.69 Aligned_cols=213 Identities=23% Similarity=0.327 Sum_probs=185.8
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
+.||||||||||||||||++|++++|..|+++|.+|||+|.+|+|.||++|+|||+++|.|||++|||||++|++|
T Consensus 411 ~~NsfEQLcINyaNEkLQ~~f~~~if~~Eq~~Y~~EgI~~~~i~~~DN~~~ldLie~k~~Gil~lLDee~~~p~~t---- 486 (717)
T cd01382 411 EHNSFEQFCINYCNEKLQQFFNERILKEEQELYQREGLGVNEVHYVDNQDCIDLIEAKLNGILDILDEENRLPQPS---- 486 (717)
T ss_pred CCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccHHHHHHHhcCCccHHHHhHHHhcCCCCC----
Confidence 3699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhccccCCCCCcccc--------------ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHH
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCV--------------FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFV 146 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~--------------~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v 146 (234)
|++|++||++.+++|+.|..+ ..|++.||||+|+| +++||++||+|.++++++.+|++|++++|
T Consensus 487 -D~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~v~gfleKNkD~l~~~~~~ll~~S~n~~i 564 (717)
T cd01382 487 -DQHFTSVVHQKHKDHFRLTIPRKSKLAVHRNLRDDEGFIIRHFAGAVCY-ETTQFVEKNNDALHMSLESLICESKDKFL 564 (717)
T ss_pred -HHHHHHHHHHHhcCCcCccCCCccccccccccCCCCCEEEEecceeEee-cCCChHHhcCccccHHHHHHHHhCchHHH
Confidence 999999999999888766321 23789999999999 99999999999999999999999999999
Q ss_pred HHhhcCCccchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCcccc
Q psy17060 147 RELVGADPVAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVF 218 (234)
Q Consensus 147 ~~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~ 218 (234)
+.||......... . +..++ .+......+|+.+|++||++| ||||||..+.|+.||..
T Consensus 565 ~~lf~~~~~~~~~----------~---~~~~k--~~~~tv~~~fk~qL~~Lm~~L~~t~~hfIRCIKPN~~k~p~~fd~~ 629 (717)
T cd01382 565 RSLFESSTNNNDT----------K---QKAGK--LSFISVGNKFKTQLNLLLEKLRSTGSSFIRCIKPNLKMVSHQFEGA 629 (717)
T ss_pred HHHhccccccccc----------c---ccccC--ccCccHHHHHHHHHHHHHHHHhccCCeeeeeeCCCcccCCCCCChH
Confidence 9999864322100 0 00011 111223456777999999988 99999999999999999
Q ss_pred chhhhhhhcchhhhhC
Q psy17060 219 SASGVRNALSLVKIIE 234 (234)
Q Consensus 219 ~v~~Ql~~~~i~~~~~ 234 (234)
.|..||+++||+|+|+
T Consensus 630 ~V~~QLr~~GvLE~vr 645 (717)
T cd01382 630 QILSQLQCSGMVSVLD 645 (717)
T ss_pred HHHHHHHhcchHHHHH
Confidence 9999999999999874
No 9
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=100.00 E-value=8.5e-57 Score=428.48 Aligned_cols=207 Identities=24% Similarity=0.348 Sum_probs=184.6
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhc-CCCchhhhhHHHhhhh-ccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVLDDQAKIR-RKFVG 78 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~-~p~Gll~lLdee~~~~-~~t~~ 78 (234)
+.||||||||||||||||++|++++|+.|+++|.+|||+|..|+|.||++|+|||++ +|.|||++|||||++| +++
T Consensus 380 ~~NsfEQLcINyaNEkLQ~~f~~~~F~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~~~~~Gil~lLdee~~~p~~~t-- 457 (674)
T cd01378 380 QKNSFEQFCINYVNEKLQQIFIELTLKAEQEEYVREGIKWTPIEYFNNKIVCDLIEGKRPPGIFSILDDVCATPHEGT-- 457 (674)
T ss_pred ccccHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCcCChHHHHHHHhcCCCcchHHHHHHHHcCCCCCC--
Confidence 369999999999999999999999999999999999999999999999999999999 8999999999999999 899
Q ss_pred ccchhHHHHHhccccCCCCCccccc----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCc
Q psy17060 79 AILNSRTIRCVCSWSRGNPMVSCVF----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADP 154 (234)
Q Consensus 79 ~~~d~~fl~kl~~~~~~~~~~~~~~----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~ 154 (234)
|++|++|+++++++|+.+..+. .|.+.||||+|+| +++||++||+|.++++++++|+.|++++|+.||++..
T Consensus 458 ---D~~~~~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~~~gfleKNrD~l~~~~~~ll~~S~n~~i~~lf~~~~ 533 (674)
T cd01378 458 ---DQTFLEKLNKKFSSHPHSDHFSSGSDEFRIKHYAGDVTY-SVEGFCDKNKDTLFKDLIELMQSSSNPFLRSLFPEKS 533 (674)
T ss_pred ---hHHHHHHHHHHhccCCCCCCCCCCCCcEEEEEeceeeee-cCcCHHHhhcchhhHHHHHHHHhCchHHHHHHhcccc
Confidence 9999999999999888754332 4789999999999 9999999999999999999999999999999998532
Q ss_pred cchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhh
Q psy17060 155 VAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNA 226 (234)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~ 226 (234)
... +..+. .....+|+.+|++||++| ||||||..+.|+.||...|..||++
T Consensus 534 ~~~-----------~~~~~----------~tv~~~fk~qL~~Lm~~L~~t~phfIRCIKPN~~k~p~~Fd~~~V~~QLr~ 592 (674)
T cd01378 534 DAD-----------SKKRP----------TTAGFKIKTSANALVETLMKCTPHYIRCIKPNETKSPNDFDESRVLHQVKY 592 (674)
T ss_pred ccc-----------ccCCC----------CcHHHHHHHHHHHHHHHHHccCCeEEEEECCCccCCchhcCHHHHHHHHHh
Confidence 211 11011 122456777899999887 9999999999999999999999999
Q ss_pred cchhhhhC
Q psy17060 227 LSLVKIIE 234 (234)
Q Consensus 227 ~~i~~~~~ 234 (234)
.||+|+|+
T Consensus 593 ~GvLE~ir 600 (674)
T cd01378 593 LGLLENVR 600 (674)
T ss_pred cChHHHHH
Confidence 99999974
No 10
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=100.00 E-value=1.5e-56 Score=427.77 Aligned_cols=224 Identities=29% Similarity=0.362 Sum_probs=188.8
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
+.|||||||||||||+||++|++++|+.|+++|.+|||+|+.|+|.||++|+|||++ |.|||++|||||++|+++
T Consensus 382 ~~NsfEQLcINyaNEkLQ~~f~~~iF~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~-~~Gil~lLdee~~~p~~t---- 456 (691)
T cd01380 382 EKNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGIEWTFIDFYDNQPCIDLIES-KLGILSLLDEECRLPKGS---- 456 (691)
T ss_pred CCCCHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCHHHHHHHhC-CCchHHHhHHhhcCCCCC----
Confidence 369999999999999999999999999999999999999999999999999999996 589999999999999999
Q ss_pred chhHHHHHhccccC--CCCCccccc----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCc
Q psy17060 81 LNSRTIRCVCSWSR--GNPMVSCVF----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADP 154 (234)
Q Consensus 81 ~d~~fl~kl~~~~~--~~~~~~~~~----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~ 154 (234)
|++|++||++.++ +|+.|..+. .|.+.||||+|+| +++||++||+|.++++++++|+.|++++|+.||+...
T Consensus 457 -d~~f~~kl~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~v~gfleKNrD~l~~~~~~ll~~S~~~~i~~lf~~~~ 534 (691)
T cd01380 457 -DESWAQKLYNKLPKKKNPHFEKPRFGQTSFTVKHFADDVEY-DVDGFLEKNRDTVSDEHLDVLKASKNPFLKEVLDAAE 534 (691)
T ss_pred -hHHHHHHHHHHhcccCCCCccCCCCCCCeeEEEEccCCccc-ccccHHHhccccccHHHHHHHHhCccHHHHHHhhhhc
Confidence 9999999999998 788886543 4789999999999 9999999999999999999999999999999998654
Q ss_pred cchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhh
Q psy17060 155 VAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNA 226 (234)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~ 226 (234)
........ .... ....+..+...++......+|+++|++||.+| ||||||..+.|+.||...|..||++
T Consensus 535 ~~~~~~~~-~~~~--~~~~~~~~~~~~~~~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN~~k~~~~fd~~~V~~QLr~ 611 (691)
T cd01380 535 LASSSSSS-AKSK--PAAKRPPKRAKQHKPTVGSQFKSSLIELMSTLNSTNPHYIRCIKPNDEKKPFKFEPKRVLQQLRA 611 (691)
T ss_pred cccccccc-cccc--ccccccccccccCCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCcccCcCccCHHHHHHHHHH
Confidence 33211000 0000 00000111111223334667888999999998 9999999999999999999999999
Q ss_pred cchhhhhC
Q psy17060 227 LSLVKIIE 234 (234)
Q Consensus 227 ~~i~~~~~ 234 (234)
.||+|+|+
T Consensus 612 ~GvlE~ir 619 (691)
T cd01380 612 CGVLETIR 619 (691)
T ss_pred hchHHHHH
Confidence 99999874
No 11
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=100.00 E-value=3e-56 Score=425.79 Aligned_cols=218 Identities=26% Similarity=0.346 Sum_probs=186.7
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccc-cChHHHHHHhhcCCCchhhhhHHHhhhhcccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGA 79 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~ 79 (234)
+.|||||||||||||+||++|++++|+.|+++|.+|||+|..|+| .||++|+|||+++|.|||++|||||++|+++
T Consensus 388 ~~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~~~~dn~~~ldLie~~~~Gil~lLdee~~~~~~t--- 464 (693)
T cd01377 388 DFNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGLDLQPTIDLIEKNPMGILSLLDEECVFPKAT--- 464 (693)
T ss_pred CCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCCcHHHHHHHhcCCCchHhhhhHHhcCCCCC---
Confidence 369999999999999999999999999999999999999999999 5999999999999999999999999999999
Q ss_pred cchhHHHHHhccccCCCCCccc------cccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCC
Q psy17060 80 ILNSRTIRCVCSWSRGNPMVSC------VFWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGAD 153 (234)
Q Consensus 80 ~~d~~fl~kl~~~~~~~~~~~~------~~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~ 153 (234)
|++|++|+++.+++++.|.. ...|++.||||+|+| +++||++||+|.++++++++|++|++++|+.||+..
T Consensus 465 --D~~~~~kl~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~~~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~ 541 (693)
T cd01377 465 --DKTFVEKLYDNHLGKSKFKKPKKGKAKAHFSLVHYAGTVDY-NIDGWLEKNKDPLNDNVVGLLKKSSDKLVAELFKDY 541 (693)
T ss_pred --HHHHHHHHHHHhcCCCcccccCCCCCCCcEEEEeeceeEee-ccccHHHhccccccHHHHHHHHhCchHHHHHHhhhh
Confidence 99999999999988887621 124789999999999 999999999999999999999999999999999865
Q ss_pred ccchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhh
Q psy17060 154 PVAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRN 225 (234)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~ 225 (234)
...... . .+....+ .+.++......+|+.+|++||++| ||||||..+.|+.||...|..||+
T Consensus 542 ~~~~~~--~-----~~~~~~~---~~~~~~~tv~~~F~~qL~~L~~~L~~t~~hfIRCIKPN~~k~p~~Fd~~~V~~QLr 611 (693)
T cd01377 542 AEASGD--G-----GGGGGKK---KKGGSFRTVSQLYKEQLNKLMTTLRSTNPHFVRCIIPNEEKKPGKLDAHLVLDQLR 611 (693)
T ss_pred cccccc--c-----ccccCCC---CcCCccccHHHHHHHHHHHHHHHHhccCCeEEEEeCcCccCCCCccCHHHHHHHHH
Confidence 433200 0 0000000 000111233567778999999998 999999999999999999999999
Q ss_pred hcchhhhhC
Q psy17060 226 ALSLVKIIE 234 (234)
Q Consensus 226 ~~~i~~~~~ 234 (234)
++||+|+|+
T Consensus 612 ~~GvlEtvr 620 (693)
T cd01377 612 CNGVLEGIR 620 (693)
T ss_pred hcchHHHHH
Confidence 999999874
No 12
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=100.00 E-value=1.4e-55 Score=421.31 Aligned_cols=208 Identities=28% Similarity=0.461 Sum_probs=186.9
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
.+||||||||||||||||++|++++|+.|+++|.+|||+|+.++|.||++|+|||+++|.|||++|||||++|+++
T Consensus 383 ~~NsfEQLcINyaNEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dN~~~l~li~~~~~Gil~lLdee~~~~~~t---- 458 (677)
T smart00242 383 EVNSFEQLCINYANEKLQQFFNQHVFKLEQEEYEREGIDWTFIDFFDNQDCIDLIEKKPPGILSLLDEECRFPKAT---- 458 (677)
T ss_pred ccCCHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHcCCccHHHHHHHHhcCCCCC----
Confidence 3699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhccccCCCCCcccc-----ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCcc
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCV-----FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPV 155 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~-----~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~ 155 (234)
|++|++|+++++++++.|..+ ..|.+.||||+|+| +++||++||+|.++++++++|+.|+|++|+.||+....
T Consensus 459 -d~~~~~kl~~~~~~~~~~~~~~~~~~~~F~I~H~AG~V~Y-~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~ 536 (677)
T smart00242 459 -DQTFLEKLNQTHEKHPHFSKPRKKGRTEFIIKHYAGDVTY-DVTGFLEKNKDTLFKDLIELLQSSKNPLIASLFPSGES 536 (677)
T ss_pred -HHHHHHHHHHHhcCCCCccCCCCCCCCeEEEEecceeEee-cCccHHHHccchhhHHHHHHHHhCCcHHHHHHhccccc
Confidence 999999999999999888654 24789999999999 99999999999999999999999999999999986543
Q ss_pred chhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhhc
Q psy17060 156 AVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNAL 227 (234)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~~ 227 (234)
.. .++ ++......+|+.+|++||.+| ||||||..+.|+.||...|..||+++
T Consensus 537 ~~------------------~~~--~~~~tv~~~fk~~L~~L~~~l~~t~~hfIRCIKPN~~k~~~~Fd~~~V~~QLr~~ 596 (677)
T smart00242 537 NA------------------GSK--KRFRTVGSQFKESLNKLMDTLNSTNPHFIRCIKPNEEKKPGDFDSSLVLHQLRYL 596 (677)
T ss_pred cc------------------ccc--CCCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCcccCcccccHHHHHHHHHhc
Confidence 21 001 112223456677899999887 99999999999999999999999999
Q ss_pred chhhhhC
Q psy17060 228 SLVKIIE 234 (234)
Q Consensus 228 ~i~~~~~ 234 (234)
||+|+|+
T Consensus 597 Gvle~ir 603 (677)
T smart00242 597 GVLETIR 603 (677)
T ss_pred ccHHHHH
Confidence 9999974
No 13
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=100.00 E-value=3.8e-55 Score=418.91 Aligned_cols=219 Identities=29% Similarity=0.420 Sum_probs=188.6
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
+.|||||||||||||+||++|++++|+.|+++|.+|||+|+.++|.||++|+|||+++|.|||++|||||++|+++
T Consensus 376 ~~NsfEQLcINy~NEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dn~~~ldli~~~~~Gi~~lLdee~~~~~~~---- 451 (679)
T cd00124 376 EKNSFEQLCINYANEKLQQFFNQHVFKLEQEEYQEEGIDWESIDFTDNQEVIDLIEKKPGGLLSLLDEECLFPKGT---- 451 (679)
T ss_pred CCCCHHHHhcccchHHHHHHHHHHHHHHHHHHHHhcCCCccCCcCCCCHHHHHHHhcCCCcHHHHHHHHhCCCCCC----
Confidence 3699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhccccCCCCCcccc-----ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCcc
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCV-----FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPV 155 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~-----~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~ 155 (234)
|++|++|+++.+++++.|... ..|.+.||||+|+| +++||++||+|.++++++++|+.|++++|+.||.....
T Consensus 452 -d~~~~~kl~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~ 529 (679)
T cd00124 452 -DETFLEKLNNKLKSNNAFYPAKKNAPTEFTIKHYAGDVTY-DARGFLEKNKDVLSPELVSLLKSSSNPFIRELFESELS 529 (679)
T ss_pred -HHHHHHHHHHHhcCCcccccCCCCCCCceEEEeeceeEEe-cCCCHHHhcCCcccHHHHHHHHhCCcHHHHHHhccccc
Confidence 999999999999988876222 24789999999999 99999999999999999999999999999999987543
Q ss_pred chhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhhc
Q psy17060 156 AVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNAL 227 (234)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~~ 227 (234)
...... ...+..+.+.++......+|+++|++||.+| ||||||..+.|+.||...|..||+++
T Consensus 530 ~~~~~~---------~~~~~~~~~~~~~~tv~~~f~~qL~~L~~~L~~t~~hfIRCIKPN~~k~p~~fd~~~V~~QLr~~ 600 (679)
T cd00124 530 KTGNSS---------TGSTSSKGKKKKGQTVGSQFRTSLDALMATLNSTEPHFIRCIKPNEEKKPNAFDSGKVLQQLRYL 600 (679)
T ss_pred cccccc---------cccccccccccCCCcHHHHHHHHHHHHHHHHhcCCCeEEEEECCCcccCCCccChHHHHHHHHHh
Confidence 321100 0000011111122333567778999999998 99999999999999999999999999
Q ss_pred chhhhhC
Q psy17060 228 SLVKIIE 234 (234)
Q Consensus 228 ~i~~~~~ 234 (234)
||+|+|+
T Consensus 601 GvlE~ir 607 (679)
T cd00124 601 GILETIR 607 (679)
T ss_pred chHHHHH
Confidence 9999874
No 14
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=100.00 E-value=4.7e-53 Score=400.98 Aligned_cols=185 Identities=27% Similarity=0.381 Sum_probs=165.4
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
+.||||||||||||||||++|++++|..|+++|.+|||+|..++|.||++|+|||++||.|||++|||||++|++|
T Consensus 387 ~~NsfEQLcINyaNEkLQ~~f~~~vf~~Eq~eY~~EgI~~~~i~~~dN~~~ldli~~kp~Gil~lLdee~~~~~~t---- 462 (653)
T cd01379 387 KKNSFEQLCINIANEQIQYYFNQHIFAWEQQEYLNEGVDARLVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQAT---- 462 (653)
T ss_pred CCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHhHccCCCcHHHHHHHHhcCCCCC----
Confidence 3699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhccccCCCCCcccc----ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCccc
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCV----FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPVA 156 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~----~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~~ 156 (234)
|++|++|++..++++ .|..+ ..|++.||||+|+| +++||++||+|.++++++.+|++|
T Consensus 463 -d~~~~~kl~~~~~~~-~~~~~~~~~~~F~I~HyAG~V~Y-~~~gfleKNkD~l~~~~~~ll~~S--------------- 524 (653)
T cd01379 463 -DQTLVEKFEDNLKSK-FFWRPKRVELSFGIHHYAGKVLY-NASGFLEKNRDFLPADIVLLLRSS--------------- 524 (653)
T ss_pred -HHHHHHHHHHhcCCC-CccCCCCCCCceEEEEeceeEee-cCCCHHHhccccccHHHHHHHHhC---------------
Confidence 999999999887543 34322 23789999999999 999999999999999999999988
Q ss_pred hhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhhcc
Q psy17060 157 VFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNALS 228 (234)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~~~ 228 (234)
+++++ +|+++|.+||.+| ||||||..+.|+.||...|..||+++|
T Consensus 525 -----------------~tv~~----------~fr~~l~~L~~~l~~t~~hfIRCIKPN~~k~~~~fd~~~V~~QLr~~G 577 (653)
T cd01379 525 -----------------QTVAS----------YFRYSLMDLLSKMVVGQPHFVRCIKPNEDRQAKKFDAEKVLKQLRYTG 577 (653)
T ss_pred -----------------cHHHH----------HHHHHHHHHHHHHhccCCceEEeeCCCcccCccccCHHHHHHHHHHcc
Confidence 01222 3445666777666 999999999999999999999999999
Q ss_pred hhhhhC
Q psy17060 229 LVKIIE 234 (234)
Q Consensus 229 i~~~~~ 234 (234)
|+|+|+
T Consensus 578 vlE~ir 583 (653)
T cd01379 578 ILETAR 583 (653)
T ss_pred hHHHHH
Confidence 999874
No 15
>KOG0164|consensus
Probab=100.00 E-value=3.4e-53 Score=388.57 Aligned_cols=209 Identities=24% Similarity=0.360 Sum_probs=182.4
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
|.|||||||||||||+|||.|++.+++.|||||.+|||+|..|+|.+|..++||++.+..|||+||||||+.|+.-
T Consensus 389 ~~NSFEQfcINYCNEKLQQlFIel~LKqEQEEY~rEgI~W~~i~YFnN~iIcdLvE~~~~GIlailDe~Cl~~G~v---- 464 (1001)
T KOG0164|consen 389 QDNSFEQFCINYCNEKLQQLFIELVLKQEQEEYEREGIEWTHIDYFNNKIICDLVEQPHKGILAILDEACLRPGTV---- 464 (1001)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCCceehhhcCCceeeehhccCccchhhhhhHHhcCCCcc----
Confidence 6799999999999999999999999999999999999999999999999999999999999999999999987532
Q ss_pred chhHHHHHhccccCCCCCccccc-----------cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHh
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCVF-----------WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVREL 149 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~~-----------~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~L 149 (234)
+|.+||++|.+.+++|++|.... .|.+.||||+|+| +|.||++||+|.|.+|+-.+|.+|++++++.|
T Consensus 465 tD~tfL~~l~~~~~~H~Hy~sr~~~~~dksl~~~~Fri~HYAG~V~Y-sV~gFidKN~D~Lf~dlk~~m~~s~~~~l~~~ 543 (1001)
T KOG0164|consen 465 TDETFLEKLNQKLKKHPHYTSRKLKQTDKSLGFSDFRITHYAGDVTY-SVEGFIDKNNDLLFQDLKRLMYNSKNPLLKSL 543 (1001)
T ss_pred chHHHHHHHHHHhhhCCcchhhhccccccccCccceeEEEeccceEE-EEEeeeccCccHHHHHHHHHHHhcCCchHHHh
Confidence 39999999999999999995431 2788899999999 99999999999999999999999999999999
Q ss_pred hcCCccchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchh
Q psy17060 150 VGADPVAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSAS 221 (234)
Q Consensus 150 f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~ 221 (234)
|++...+... -..++.++|..+| .|+..|+..| |||+||+++.|++||..+|.
T Consensus 544 fpeG~~~~~~---------~tkRP~Tagt~Fk----------~Sm~~Lv~nL~sKeP~YvRcikPNe~k~~~~fd~e~~~ 604 (1001)
T KOG0164|consen 544 FPEGNPDIAE---------VTKRPPTAGTLFK----------NSMAALVKNLASKEPNYVRCIKPNEHKQPGQFDEERVR 604 (1001)
T ss_pred CCCCChhHHh---------hhcCCCcHHHHHH----------HHHHHHHHHHhhcCCCeEEeeccccccCccccchhhhH
Confidence 9975543211 0112345555443 4566666666 99999999999999999999
Q ss_pred hhhhhcchhhhh
Q psy17060 222 GVRNALSLVKII 233 (234)
Q Consensus 222 ~Ql~~~~i~~~~ 233 (234)
+|++++|++|=+
T Consensus 605 hqv~ylGLleNv 616 (1001)
T KOG0164|consen 605 HQVRYLGLLENV 616 (1001)
T ss_pred HHHHHHHHHhhh
Confidence 999999999854
No 16
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=100.00 E-value=1e-52 Score=403.80 Aligned_cols=225 Identities=16% Similarity=0.135 Sum_probs=179.6
Q ss_pred CccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccc-cChHHHHHHhhcCC--------------Cchhhhh
Q psy17060 2 SLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKP--------------NGLLCVL 66 (234)
Q Consensus 2 ~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~p--------------~Gll~lL 66 (234)
.||||||||||||||||++|++++|+.|+++|.+|||+|+.+.+ .||.+|++||+++| .|||++|
T Consensus 394 ~NsfEQLcINyaNEkLQq~f~~~vF~~Eq~eY~~EGI~~~~~~~~~dn~~~i~lid~~p~~~~~~~~~~~~~~~GIl~lL 473 (767)
T cd01386 394 AATFEELCHNYLQERLQLLFHHRTFVQPLERYAEEGVEVEFDLAEPSPGTTVALVDQAPQQVVVPAGLRAEDARGLLWLL 473 (767)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCchhhHHHhhcccccccccchhhccCCCchhhhh
Confidence 49999999999999999999999999999999999999986555 79999999999865 5999999
Q ss_pred HHHhhhhcccccccchhHHHHHhccccCCCCCcccc----------ccccCCCCCc--ceeecccccchHhhhccc-hHH
Q psy17060 67 DDQAKIRRKFVGAILNSRTIRCVCSWSRGNPMVSCV----------FWMIKPTGRG--ETQWSPVAEMREKNLDLM-RGE 133 (234)
Q Consensus 67 dee~~~~~~t~~~~~d~~fl~kl~~~~~~~~~~~~~----------~~~~~~~~aG--~V~Y~~v~gfi~kN~D~l-~~~ 133 (234)
||||++|++| |++|++||++.+++|++|... ..|.+.|||| +|+| +++||++||||.+ ..+
T Consensus 474 DEec~~p~~t-----D~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~~~V~Y-~~~gfleKNkD~~~~~~ 547 (767)
T cd01386 474 DEEALVPGSS-----DDTFLERLFAAYGDRETRETGLSRLRTCEGPLQFVLFHLLGTNPVLY-DVTGWLRRAKPNPAALN 547 (767)
T ss_pred hHhhcCCCCc-----HHHHHHHHHHHhccCCCcccCccccccCCCCCcEEEEEcCCCCceEe-cCCCHHHhcCCCCChHH
Confidence 9999999999 999999999999888877441 2378899999 5999 9999999999965 689
Q ss_pred HHHHHhhCcHHHHHHhhcCCccchh-h-hhHHhhh------hccccchh----h-hhhhhhccccchhhhhchHHHHhhc
Q psy17060 134 IVGVLKNSSMAFVRELVGADPVAVF-R-WAIVRAF------FRGLFAFQ----E-AGRRYREEKGEQNREATSVAEWLSH 200 (234)
Q Consensus 134 ~~~ll~~S~~~~v~~Lf~~~~~~~~-~-~~~~~~~------~~~~~~~~----~-~g~~~r~~~~~~~~~~~~l~~l~~~ 200 (234)
++.+|+.|++++|+.||........ . .+...+. .+.....+ . .+...++ ....+|+.+|++||++
T Consensus 548 ~~~ll~~S~~~~i~~lF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~--tv~~qFk~qL~~Lm~~ 625 (767)
T cd01386 548 APQLLQDSKREEINSLFQGRAGLAPVCLGAGAGLEGTSQQALRRSSSIRRTFTSSTAAVKRK--SPCVQVKLQVDALIDT 625 (767)
T ss_pred HHHHHHhCCcHHHHHHHhcccccccccccccccccccccccccccccccccccccccccccc--cHHHHHHHHHHHHHHH
Confidence 9999999999999999975421110 0 0000000 00000000 0 0111122 2346677899999999
Q ss_pred c--------ccCCCCCCCC----------------------CCCccccchhhhhhhcchhhhhC
Q psy17060 201 E--------ACTPEVPGSI----------------------PGGVEVFSASGVRNALSLVKIIE 234 (234)
Q Consensus 201 l--------rci~pn~~~~----------------------p~~fD~~~v~~Ql~~~~i~~~~~ 234 (234)
| ||||||..+. |+.||...|.+||+++||+|+|+
T Consensus 626 L~~t~phfIRCIKPN~~k~~~~~~~~~~~~~~~~~~~~~~~p~~fd~~~V~~QLr~~GvlE~ir 689 (767)
T cd01386 626 LRRSGLHFVHCYLPQHNGGKAMARTASPSPQQSEDNGVAAEPLALDIPLLRSQLRGSQILEAAR 689 (767)
T ss_pred HhccCCeeEEEeCccccccccccccccccccccccccccccccccCHHHHHHHHHhcccHHHHH
Confidence 8 9999999974 78999999999999999999985
No 17
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=100.00 E-value=1.5e-52 Score=403.18 Aligned_cols=227 Identities=27% Similarity=0.430 Sum_probs=177.0
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccc-cChHHHHHHhhcCCCchhhhhHHHhhhhcccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGA 79 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~ 79 (234)
..|+||||||||||||||++|++++|..|+++|.+|||+|+.++| .||.+|+|||+++|.|||++|||||++|+++
T Consensus 378 ~~N~fEQLciNyanErLq~~f~~~~f~~e~~~y~~EgI~~~~i~~~~dn~~~ldLi~~~~~Gil~lLdee~~~~~~s--- 454 (689)
T PF00063_consen 378 SVNSFEQLCINYANERLQQFFNQHIFKSEQEEYKEEGIDWPFIDFNPDNQPCLDLIEKKPKGILSLLDEECLLPRGS--- 454 (689)
T ss_dssp SSB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCS-GCGHHHHHHHHHHSSTTSHHHHHHHHCTSTTS----
T ss_pred cccccccceeeeccccccceeeeecccccccccccccccccccccccCchhhhhhhccccCCHHHHhhhhhhcccch---
Confidence 469999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred cchhHHHHHhcccc-CCCCCcccc--------ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhh
Q psy17060 80 ILNSRTIRCVCSWS-RGNPMVSCV--------FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELV 150 (234)
Q Consensus 80 ~~d~~fl~kl~~~~-~~~~~~~~~--------~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf 150 (234)
|++|++++...+ +.++.|..+ ..|.+.||||+|+| +++||++||+|.++++++.+|+.|++++|+.||
T Consensus 455 --d~~fl~kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y-~v~gfleKNrD~l~~~~~~ll~~S~n~~v~~lf 531 (689)
T PF00063_consen 455 --DESFLEKLLKRHSGKHPSFVKPRFSRSTSKSSFTIKHYAGDVTY-DVEGFLEKNRDPLSQDFVSLLRSSTNSFVSSLF 531 (689)
T ss_dssp --HHHHHHHHHHHHTTTSTTEECTSSSTSSTTSCEEEEETTEEEEE-E-TTHHHHHHE-S-HHHHHHHHTSSSHHHHHHT
T ss_pred --hhHHHHHHHhhcccCCCcccccccccccCCCceEeecccCccee-ccccccccccchHHHHHHHHHHhCcCccccccc
Confidence 999999999999 788887443 24789999999999 999999999999999999999999999999999
Q ss_pred cCCccchhh--hhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccch
Q psy17060 151 GADPVAVFR--WAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSA 220 (234)
Q Consensus 151 ~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v 220 (234)
+....+... ........+........+.. ++......+|+.+|++|+.+| ||||||..+.|+.||...|
T Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~tv~~qf~~sL~~L~~~L~~t~~hfIrCIkPN~~~~~~~FD~~~V 610 (689)
T PF00063_consen 532 SSEATATSSSSSSLSRRSSSSSTQSRSSGSK-KKKSTVSSQFRSSLDELMDTLRSTQPHFIRCIKPNDQKKPNQFDSKLV 610 (689)
T ss_dssp HSHHH---S-S-S-BTTTTCCCTTSSCCCGG-TCSSBHHHHHHHHHHHHHHHHCTSEEEEEEEE-SSSS--TT---HHHH
T ss_pred ccccccccccccccccccccccccccccccc-cccccccccccccHHHHHhhhhhcccceEEEeccccccccccccchhe
Confidence 876542200 00000000000000111111 112334567888999999998 9999999999999999999
Q ss_pred hhhhhhcchhhhhC
Q psy17060 221 SGVRNALSLVKIIE 234 (234)
Q Consensus 221 ~~Ql~~~~i~~~~~ 234 (234)
..||+++||+|+++
T Consensus 611 ~~QLr~~gile~vr 624 (689)
T PF00063_consen 611 LRQLRYSGILETVR 624 (689)
T ss_dssp HHHHHHTTHHHHHH
T ss_pred ehhhhhhhhhhhhh
Confidence 99999999999874
No 18
>KOG0162|consensus
Probab=100.00 E-value=3.6e-51 Score=375.69 Aligned_cols=217 Identities=22% Similarity=0.337 Sum_probs=187.5
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcC-CCchhhhhHHHhhhhcccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGK-PNGLLCVLDDQAKIRRKFVGA 79 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~-p~Gll~lLdee~~~~~~t~~~ 79 (234)
++||||||||||.||+||+.|++.+++.|||+|.+|||.|.+|.|.||.-++|||+.| |.||+++|||.|....+. +.
T Consensus 397 e~N~FEQ~CINfVNEKLQQIFIeLTLKaEQEeYvrE~I~WTpIkYFnNKvVCDLIE~K~PPGims~ldD~~At~Ha~-~~ 475 (1106)
T KOG0162|consen 397 ENNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVREGIKWTPIKYFNNKVVCDLIENKRPPGIMSALDDVCATAHAD-SE 475 (1106)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccccchhhcCCeeeeehhhccCCchHHHHHHHHHHHhccc-cc
Confidence 5899999999999999999999999999999999999999999999999999999984 789999999999976654 33
Q ss_pred cchhHHHHHhccccCCCCCcccc-ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCccchh
Q psy17060 80 ILNSRTIRCVCSWSRGNPMVSCV-FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPVAVF 158 (234)
Q Consensus 80 ~~d~~fl~kl~~~~~~~~~~~~~-~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~~~~ 158 (234)
..|++|+++|+..+++||+|... ..|++.||||+|+| |++||++||+|.|..|++.|+++|+++|++.||++...+.
T Consensus 476 ~aDqa~~qrLn~~~~s~phF~~~s~~FvIkHYAGdVtY-di~G~~drNrD~L~~DlieLm~ts~~~Fl~slFPe~v~~d- 553 (1106)
T KOG0162|consen 476 GADQALLQRLNKLFGSHPHFESRSNGFVIKHYAGDVTY-DIDGFCDRNRDVLFKDLIELMQTSENPFLKSLFPENVDAD- 553 (1106)
T ss_pred hhHHHHHHHHHHHhcCCCccccccCceEEEEeccceee-ecccccccchhHHHHHHHHHHhccchHHHHHhCchhhccc-
Confidence 34999999999999999999553 35799999999999 9999999999999999999999999999999999764433
Q ss_pred hhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhc-cccCCCCCCCCCCCccccchhhhhhhcchhhhh
Q psy17060 159 RWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSH-EACTPEVPGSIPGGVEVFSASGVRNALSLVKII 233 (234)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~-lrci~pn~~~~p~~fD~~~v~~Ql~~~~i~~~~ 233 (234)
+..++.++|.+++++.+..+ .+|.....+ +||||||..+.|+.||..+|.+|++|||+-|=|
T Consensus 554 ----------skrRP~Tag~kIkkqANdLV---eTLmKc~P~YIR~IKPNeTK~pnD~ee~~V~HQveYLGLqENi 616 (1106)
T KOG0162|consen 554 ----------SKRRPPTAGDKIKKQANDLV---ETLMKCQPHYIRCIKPNETKSPNDWEESRVKHQVEYLGLQENI 616 (1106)
T ss_pred ----------ccCCCCCchhhHHhhHHHHH---HHHHhcCcceeEeeCCCCCCCCccHHHHHHHHHHHhcchhhhe
Confidence 22356788888777765321 123223333 299999999999999999999999999998765
No 19
>KOG0161|consensus
Probab=100.00 E-value=1.7e-45 Score=372.38 Aligned_cols=216 Identities=26% Similarity=0.363 Sum_probs=181.4
Q ss_pred CccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccc-cChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 2 SLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 2 ~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
.||||||||||+||+||++|++|+|..|+++|.+|||.|..|+| .|-+||+|||+ +|.||+|+|||||.+|++|
T Consensus 463 ~nSFEQLciNytnEkLQqfFnh~mFvlEqeeY~~EgIew~fidfG~Dlq~~idLIE-kp~Gi~slLdEEc~~PkAt---- 537 (1930)
T KOG0161|consen 463 FNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWDFIDFGLDLQPTIDLIE-KPMGILSLLDEECVVPKAT---- 537 (1930)
T ss_pred cCCHHHHHHHHHHHHHHhhhcchhhhhhHHHHHHhCCceeeeccccchhhhHHHHh-chhhHHHHHHHHHhcCCCc----
Confidence 59999999999999999999999999999999999999999999 79999999999 6679999999999999999
Q ss_pred chhHHHHHhcccc-CCCCCccccc------cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCC
Q psy17060 81 LNSRTIRCVCSWS-RGNPMVSCVF------WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGAD 153 (234)
Q Consensus 81 ~d~~fl~kl~~~~-~~~~~~~~~~------~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~ 153 (234)
|.+|++||...| +.||.|..+. .|...||||+|.| ++.||++||+|++...++++|+.|++++|..||.+.
T Consensus 538 -d~tf~~kL~~~~~gk~~~f~~~k~~~~~~~F~l~HyaG~V~Y-~~~~WL~Knkdpln~~v~~ll~~s~~~~v~~l~~~~ 615 (1930)
T KOG0161|consen 538 -DKTFLEKLCDQHLGKHPKFQKPKGKKAEAHFALVHYAGTVDY-NVDGWLEKNKDPLNDNVVSLLKQSTNKLVSSLFQDY 615 (1930)
T ss_pred -cchHHHHHHHHhhccCccccCcccccchhhhheeeecceecc-CccchhhcCCCCchHHHHHHHHhcccHHHHHHhhhh
Confidence 999999999998 8899986552 3678899999999 999999999999999999999999999999999983
Q ss_pred ccchh-hhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhh
Q psy17060 154 PVAVF-RWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVR 224 (234)
Q Consensus 154 ~~~~~-~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql 224 (234)
..... .............+|++++ ..+..+|+.||.+| |||.||..+.||.+|.-.|.+||
T Consensus 616 ~~~~~~~~~~~~~~~~K~g~F~Tvs----------~~~keql~~Lm~~l~~T~phFvRCiIPn~~K~~g~ld~~lvl~QL 685 (1930)
T KOG0161|consen 616 AGAAAAAKGGEALKKTKKGSFRTVS----------QLYKEQLNKLMTTLRSTHPHFVRCIIPNEEKKPGKLDAPLVLNQL 685 (1930)
T ss_pred hccchhhhhhhhhcccCCcchhhHH----------HHHHHHHHHHHHHhccCCCceeEEeccCccccccccCHHHHHHHh
Confidence 22211 1000000000111344433 34445666777766 99999999999999999999999
Q ss_pred hhcchhhhhC
Q psy17060 225 NALSLVKIIE 234 (234)
Q Consensus 225 ~~~~i~~~~~ 234 (234)
+=-||+|.|+
T Consensus 686 rcngVLEgIR 695 (1930)
T KOG0161|consen 686 RCNGVLEGIR 695 (1930)
T ss_pred hccCcHHHHH
Confidence 9999998773
No 20
>KOG0160|consensus
Probab=100.00 E-value=1.3e-43 Score=337.74 Aligned_cols=206 Identities=28% Similarity=0.377 Sum_probs=183.7
Q ss_pred CccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhcccccccc
Q psy17060 2 SLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAIL 81 (234)
Q Consensus 2 ~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~~ 81 (234)
.|+|||||||||||+||+.|++|+|+.|+++|..|+|+|..++|.||++|+++|+. |.|+++||||+|++|.++
T Consensus 383 ~nsfeQfcINyanEkLqq~fnqHvfk~Eqeey~~e~i~Ws~ief~dNq~~~~lie~-~~Gi~~Llde~c~lp~~t----- 456 (862)
T KOG0160|consen 383 VNSFEQFCINYANEKLQQQFNQHVFKLEQEEYTKEEIDWSGIEFRDNQECLDLIEK-PLGILALLDEECMLPKGT----- 456 (862)
T ss_pred cCcHHHhhhhhHHHHhhHHHHHHHHHHHHHHHHhhccccccccCcCccchhhhhcc-ccchhhccchhccCCCCC-----
Confidence 69999999999999999999999999999999999999999999999999999996 899999999999999999
Q ss_pred hhHHHHHhccccCCCCCccccc----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCccch
Q psy17060 82 NSRTIRCVCSWSRGNPMVSCVF----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPVAV 157 (234)
Q Consensus 82 d~~fl~kl~~~~~~~~~~~~~~----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~~~ 157 (234)
|++|..||...+..++.|..+. .|.+.||||+|+| ++.+|++||+|.+++++++++..|+++++..+|.+.....
T Consensus 457 ~~~~a~KL~~~~~~~~~f~kpr~~~~~f~v~hyAg~v~y-~~~~fL~knrd~v~~el~~ll~~s~~~~~~~~~~~~~~~~ 535 (862)
T KOG0160|consen 457 DETLAQKLYQTLKRNKRFTKPRLSRTDFRVAHYAGDVTY-DTEGFLEKNRDYVSDELIDLLLASDCHFVAGLAPPLRADS 535 (862)
T ss_pred cchHHHHHHHHhccCCccCCCCCCcCCcccccccCcccc-chhhhccCCccccCHHHHhhhhhcccchHHHhccchhcch
Confidence 9999999999888888886654 2789999999999 9999999999999999999999999999999998432221
Q ss_pred hhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhhhcch
Q psy17060 158 FRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRNALSL 229 (234)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~~~~i 229 (234)
. ....+.+ ...+|..++..||+++ |||+||..+.|..||..+|.+||++.|+
T Consensus 536 ~------------------~~~~~~t--v~s~fk~~l~~Lm~~l~~t~phyircikPn~~~~p~~fe~~~v~~Qlr~~Gv 595 (862)
T KOG0160|consen 536 S------------------AKSKRST--VGSQFKLQLISLMETLNSTPPHYIRCIKPNAEKKPQIFENNLVLQQLRCCGV 595 (862)
T ss_pred h------------------hhhhccc--HHHHHHHHHHHHHHHhcCCCCCCceeeCcchhcccccccccceeeeccccce
Confidence 0 1111222 2455666888888887 9999999999999999999999999999
Q ss_pred hhhhC
Q psy17060 230 VKIIE 234 (234)
Q Consensus 230 ~~~~~ 234 (234)
+|.|+
T Consensus 596 LetiR 600 (862)
T KOG0160|consen 596 LETIR 600 (862)
T ss_pred ehhhe
Confidence 99874
No 21
>KOG0163|consensus
Probab=100.00 E-value=7.4e-42 Score=315.21 Aligned_cols=207 Identities=26% Similarity=0.396 Sum_probs=175.8
Q ss_pred CccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhcccccccc
Q psy17060 2 SLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAIL 81 (234)
Q Consensus 2 ~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~~ 81 (234)
+||||||||||+||+||+||++.+++.|||.|..||+.++.|.|.||++||+||+.|..|||.|||||.++|+.+
T Consensus 466 ~NSFEQFCINyCNEKLQ~FFNerILkeEQElYekEGLnv~ei~f~DNqDcIeL~E~K~~GifdlLDEEaklP~~s----- 540 (1259)
T KOG0163|consen 466 VNSFEQFCINYCNEKLQKFFNERILKEEQELYEKEGLNVPEIEFTDNQDCIELIEAKSNGIFDLLDEEAKLPKPS----- 540 (1259)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEeccchhHHHHHHHhccchhhhhhhhccCCCcc-----
Confidence 699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhccccCCCCCcccc--------------ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHH
Q psy17060 82 NSRTIRCVCSWSRGNPMVSCV--------------FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVR 147 (234)
Q Consensus 82 d~~fl~kl~~~~~~~~~~~~~--------------~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~ 147 (234)
++.|..+.+..+++|=....+ -.|.+.||||.|.| .+..|+|||.|.|...+..|+..|+++++.
T Consensus 541 ~qhFT~~vHe~~k~HfRL~~PRkSklksHR~lRDdEG~liRHfAGaVCY-eT~~FvEKNnD~LH~SLe~Li~es~~~ll~ 619 (1259)
T KOG0163|consen 541 YQHFTARVHESNKNHFRLDLPRKSKLKSHRELRDDEGFLIRHFAGAVCY-ETEQFVEKNNDALHNSLEGLIEESDNPLLV 619 (1259)
T ss_pred hHHHHHHHHHhhhcceeecCCchhhhhhhhhhccccceeeeecccceee-chHHHHHhccHHHHHHHHHHHHhccchHHH
Confidence 999999998877655322111 23688899999999 999999999999999999999999999999
Q ss_pred HhhcCCccchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccc
Q psy17060 148 ELVGADPVAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFS 219 (234)
Q Consensus 148 ~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~ 219 (234)
.||+...... .-+.+|...+-++|.++|.++ ..|++.| ||||||...+|..||...
T Consensus 620 sLF~S~s~t~------a~~~~gkL~~iSVGaKFKtQL----------~~LldKL~stGt~FiRCiKPN~kM~~~~FeGs~ 683 (1259)
T KOG0163|consen 620 SLFPSGSSTS------AKQTRGKLKFISVGAKFKTQL----------SELLDKLESTGTHFIRCIKPNSKMIDRHFEGSA 683 (1259)
T ss_pred HHccCCCCCc------cccccceeeEEehhHHHHHHH----------HHHHHHHHhcCCeeEEeecCccccccccccHHH
Confidence 9998653221 011235555666666655544 4555444 999999999999999999
Q ss_pred hhhhhhhcchh
Q psy17060 220 ASGVRNALSLV 230 (234)
Q Consensus 220 v~~Ql~~~~i~ 230 (234)
..+||.--|..
T Consensus 684 iLsQLqCsGm~ 694 (1259)
T KOG0163|consen 684 ILSQLQCSGMI 694 (1259)
T ss_pred HHHHhhhccHH
Confidence 99999875543
No 22
>KOG4229|consensus
Probab=99.97 E-value=1.1e-31 Score=261.73 Aligned_cols=163 Identities=38% Similarity=0.625 Sum_probs=149.8
Q ss_pred CccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhcccccccc
Q psy17060 2 SLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAIL 81 (234)
Q Consensus 2 ~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~~ 81 (234)
.|+|||+|||||||+||.||++|+|..|++||..|+|+|..|.|.||..|+|+|..||.||+.+||||+.+|+++
T Consensus 442 ~nsfEq~~in~Ane~lQ~~fnqhIf~~Eq~ey~~e~I~w~~i~~~dN~~~ldli~~kp~gil~liDees~fP~~t----- 516 (1062)
T KOG4229|consen 442 RNSFEQLCINLANEQLQYYFNQHIFALEQEEYDNESIDWRNIEFADNRRRLDLISPKPMGILSLIDEESRFPKAT----- 516 (1062)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhcCCCeeeeeeeeccchhhhhccCccchhheecccCcCCchH-----
Confidence 699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhccccCCCCCccccc-----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCCccc
Q psy17060 82 NSRTIRCVCSWSRGNPMVSCVF-----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGADPVA 156 (234)
Q Consensus 82 d~~fl~kl~~~~~~~~~~~~~~-----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~~~~ 156 (234)
|.+++.|++..++.+..+..+. .|.+.||||.|.| ++.||++||+|.++.+++.++++|.+.+++.++..+..+
T Consensus 517 d~tl~~k~~~q~~~~~~y~~~k~~~e~~f~I~Hyagkv~y-~~~~flekNrD~~~~d~~~~~~s~~~~~~~~~~~~~~~~ 595 (1062)
T KOG4229|consen 517 DQTLLLKLNMQHGSNNLYVFPKSRVETVFGITHYAGKVQY-NIRGFLEKNRDTVRNDLVNLLRSSDESLLRQLVNGDPTA 595 (1062)
T ss_pred HHHHHHHhhhhhhcccccccccccccceeeeeeecceehh-hhhhHHHhhhhhhhhhHHhhcccccchhhcccCCCCCcc
Confidence 9999999999998766553332 3689999999999 999999999999999999999999999999999999888
Q ss_pred hhhhhHHhhhhccc
Q psy17060 157 VFRWAIVRAFFRGL 170 (234)
Q Consensus 157 ~~~~~~~~~~~~~~ 170 (234)
..++...++.....
T Consensus 596 ~~~~~~~ra~~~~~ 609 (1062)
T KOG4229|consen 596 VSRWFELRALKVAM 609 (1062)
T ss_pred CCcchhhhhhcccc
Confidence 87777776655333
No 23
>smart00394 RIIa RIIalpha, Regulatory subunit portion of type II PKA R-subunit. RIIalpha, Regulatory subunit portion of type II PKA R-subunit. Contains dimerisation interface and binding site for A-kinase-anchoring proteins (AKAPs).
Probab=25.94 E-value=48 Score=19.39 Aligned_cols=15 Identities=27% Similarity=0.344 Sum_probs=11.7
Q ss_pred cchhhhhhhhhhHHHH
Q psy17060 4 LFEQLCINYANEHLQY 19 (234)
Q Consensus 4 sfeqlciNy~nE~Lq~ 19 (234)
..-|||+||. ++|+.
T Consensus 21 d~~~f~~~yF-~kL~~ 35 (38)
T smart00394 21 DLVQFAADYF-EKLEE 35 (38)
T ss_pred cHHHHHHHHH-HHHHH
Confidence 3568999999 78865
Done!