Query psy17060
Match_columns 234
No_of_seqs 164 out of 1152
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 20:52:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17060.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17060hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lkx_A Myosin IE heavy chain; 100.0 1.6E-58 5.4E-63 440.0 12.4 207 1-234 394-618 (697)
2 2v26_A Myosin VI; calmodulin-b 100.0 3.5E-58 1.2E-62 442.7 13.1 214 1-234 460-695 (784)
3 4anj_A Unconventional myosin-V 100.0 4.2E-58 1.4E-62 451.7 13.5 214 1-234 464-699 (1052)
4 1w7j_A Myosin VA; motor protei 100.0 1.6E-57 5.4E-62 438.3 13.0 227 1-234 445-692 (795)
5 4db1_A Myosin-7; S1DC, cardiac 100.0 2.6E-57 9E-62 435.4 11.7 217 1-234 469-703 (783)
6 1w9i_A Myosin II heavy chain; 100.0 9.7E-57 3.3E-61 430.4 10.3 210 1-234 462-686 (770)
7 1kk8_A Myosin heavy chain, str 100.0 3.9E-56 1.4E-60 430.5 12.6 214 1-234 468-701 (837)
8 2dfs_A Myosin-5A; myosin-V, in 100.0 7.1E-56 2.4E-60 439.6 12.2 227 1-234 445-692 (1080)
9 2ycu_A Non muscle myosin 2C, a 100.0 3.7E-55 1.3E-59 431.6 13.1 222 1-234 441-681 (995)
10 1g8x_A Myosin II heavy chain f 100.0 5.8E-55 2E-59 430.1 11.0 210 1-234 462-686 (1010)
11 1i84_S Smooth muscle myosin he 100.0 1.9E-54 6.5E-59 435.1 12.7 222 1-234 472-714 (1184)
No 1
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=1.6e-58 Score=440.01 Aligned_cols=207 Identities=24% Similarity=0.357 Sum_probs=183.5
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
+.||||||||||||||||++|++++|+.||+||.+|||+|..|+|.||++|+|||+++|.|||+||||||++|++|
T Consensus 394 ~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dN~~~idLie~kp~GilslLDEec~~p~~t---- 469 (697)
T 1lkx_A 394 QNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKST---- 469 (697)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHTTSSSSSHHHHHHHHHHSTTCC----
T ss_pred CcCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCHHHHHHHhcccCChhhhhHHhhCCCCCC----
Confidence 4699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhccccCCCCCcccc----------ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhh
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCV----------FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELV 150 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~----------~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf 150 (234)
|.+|++|+++++++|++|..+ ..|.+.||||+|+| +++||++||+|.++++++.+|+.|+++||+.||
T Consensus 470 -D~~f~~kl~~~~~~~~~f~~~~~~~~k~~~~~~F~I~HyAG~V~Y-~~~gfleKNkD~l~~~~~~ll~~S~~~~l~~lf 547 (697)
T 1lkx_A 470 -DQTFLDSICKQFEKNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTY-DVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLF 547 (697)
T ss_dssp -HHHHHHHHHHHSSSSTTEECTTTSCCTTSCTTEEEEEETTEEEEE-ECTTHHHHHHCCCCHHHHHHHHTCCSHHHHHHC
T ss_pred -hHHHHHHHHHHhcCCCccccCCCCCCCccccCceeeeeeeeEEEE-ccCChhhhhcccccHHHHHHHhccchHHHHHhc
Confidence 999999999999999988542 24788899999999 999999999999999999999999999999999
Q ss_pred cCCccchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhh
Q psy17060 151 GADPVAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASG 222 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~ 222 (234)
+...... +..++ .+...+|+.+|++||++| ||||||..+.|+.||...|.+
T Consensus 548 ~~~~~~~-----------~~~r~----------~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~ 606 (697)
T 1lkx_A 548 PPTRPED-----------SKKRP----------ETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRH 606 (697)
T ss_dssp C--------------------------------CCHHHHHHHHHHHHHHHHTTSEEEEEEEECCCTTCCTTCCCHHHHHH
T ss_pred ccccccc-----------ccCCC----------CcHHHHHHHHHHHHHHHHHccCCcceEeecCCCcCCCCCcChhhccc
Confidence 8643100 00011 123456777899999988 999999999999999999999
Q ss_pred hhhhcchhhhhC
Q psy17060 223 VRNALSLVKIIE 234 (234)
Q Consensus 223 Ql~~~~i~~~~~ 234 (234)
||+++||+|.|+
T Consensus 607 QLr~~GvlE~ir 618 (697)
T 1lkx_A 607 QVRYLGLLENVR 618 (697)
T ss_dssp HHHHHTSHHHHH
T ss_pred cCcccccHHHHH
Confidence 999999999874
No 2
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=3.5e-58 Score=442.65 Aligned_cols=214 Identities=24% Similarity=0.319 Sum_probs=182.9
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
+.||||||||||||||||++|++++|+.||+||.+|||+|..|+|.||++|+|||+++|.|||+||||||++|++|
T Consensus 460 ~~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idLie~kp~GIlslLDEe~~~p~~t---- 535 (784)
T 2v26_A 460 EHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS---- 535 (784)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSCC----
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCCcccccccChHHHHHHHhhccccHHHHHHHHhcCCCCC----
Confidence 4699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhccccCCCCCcccc--------------ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHH
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCV--------------FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFV 146 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~--------------~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v 146 (234)
|.+|++||++.+++|++|..+ ..|.+.||||+|+| +++||++||+|.++++++.+|+.|+++||
T Consensus 536 -D~~f~~kl~~~~~~~~~~~~p~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~~~gfleKN~D~l~~~~~~ll~~S~~~~l 613 (784)
T 2v26_A 536 -DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCY-ETTQFVEKNNDALHMSLESLICESRDKFI 613 (784)
T ss_dssp -HHHHHHHHHHHTTTCTTEECGGGCSSGGGTTSCTTSEEEEEETTEEEEE-ECTTHHHHTBCCCCHHHHHHHHTCSCHHH
T ss_pred -hHHHHHHHHHHhCCCcccccCCCccccccccccCCCceEeeecCccEee-eccCHHHhccchhhHHHHHHHHhchhhHH
Confidence 999999999999998877432 14788899999999 99999999999999999999999999999
Q ss_pred HHhhcCCccchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCcccc
Q psy17060 147 RELVGADPVAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVF 218 (234)
Q Consensus 147 ~~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~ 218 (234)
+.||+........ +. +..++ ....+...+|+.+|++||++| ||||||..+.|+.||..
T Consensus 614 ~~Lf~~~~~~~~~---------~~---~~~~~--~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~ 679 (784)
T 2v26_A 614 RELFESSTNNNKD---------TK---QKAGK--LSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGA 679 (784)
T ss_dssp HHHC------------------------------CCCCBHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCSSCCCHH
T ss_pred HHHcccccccccC---------cc---cCCCC--CccccHHHHHHHHHHHHHHHHHccCCeeEEEecCCcccccCccccc
Confidence 9999875321100 00 00011 111223456777999999988 99999999999999999
Q ss_pred chhhhhhhcchhhhhC
Q psy17060 219 SASGVRNALSLVKIIE 234 (234)
Q Consensus 219 ~v~~Ql~~~~i~~~~~ 234 (234)
.|.+||+++||+|.|+
T Consensus 680 ~V~~QLr~~GvlE~ir 695 (784)
T 2v26_A 680 QILSQLQCSGMVSVLD 695 (784)
T ss_dssp HHHHHHHHTTHHHHHH
T ss_pred cccccccccccHHHHH
Confidence 9999999999999874
No 3
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=4.2e-58 Score=451.69 Aligned_cols=214 Identities=24% Similarity=0.321 Sum_probs=184.4
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
+.|||||||||||||+||++|++++|+.|++||.+|||+|..|+|.||++|||||+++|.|||+||||||++|++|
T Consensus 464 ~~NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idLie~kp~GIl~lLDEe~~~p~~t---- 539 (1052)
T 4anj_A 464 EHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS---- 539 (1052)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSCC----
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCcccCCcCCcHHHHHHHHcCcccHHHHHHHHhcCCCCc----
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhccccCCCCCccccc--------------cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHH
Q psy17060 81 LNSRTIRCVCSWSRGNPMVSCVF--------------WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFV 146 (234)
Q Consensus 81 ~d~~fl~kl~~~~~~~~~~~~~~--------------~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v 146 (234)
|++|++||++.|++|+.|..+. .|.+.||||+|+| +++||++||+|.|+++++.+|++|+++||
T Consensus 540 -D~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y-~~~gfleKNrD~l~~~~~~ll~~S~~~~i 617 (1052)
T 4anj_A 540 -DQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCY-ETTQFVEKNNDALHMSLESLICESRDKFI 617 (1052)
T ss_dssp -HHHHHHHHHHTTTTCTTEECGGGCSCSTTTTCCTTSEEEEEETTEEEEE-ECTTHHHHHBCCCCHHHHHHHHTCSCHHH
T ss_pred -HHHHHHHHHHHhccCccccCCcccccccccccCCCCCeEEEcCCccEEE-ecCChhhhccccccHHHHHHHHhCCcHHH
Confidence 9999999999999998885432 2789999999999 99999999999999999999999999999
Q ss_pred HHhhcCCccchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCcccc
Q psy17060 147 RELVGADPVAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVF 218 (234)
Q Consensus 147 ~~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~ 218 (234)
+.||+........ ..+..++. ...+...+|+.||++||++| |||+||..+.|+.||..
T Consensus 618 ~~Lf~~~~~~~~~------------~~~~~~~~--~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~ 683 (1052)
T 4anj_A 618 RELFESSTNNNKD------------TKQKAGKL--SFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGA 683 (1052)
T ss_dssp HHTTCC------------------------------CCBHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCSSCCCHH
T ss_pred HHhhhcccccccc------------ccCCCCCC--CCccHHHHHHHHHHHHHHHHcCcCCEEEEEECCCccCCCCcCCHH
Confidence 9999865432211 00011111 11223456677999999988 99999999999999999
Q ss_pred chhhhhhhcchhhhhC
Q psy17060 219 SASGVRNALSLVKIIE 234 (234)
Q Consensus 219 ~v~~Ql~~~~i~~~~~ 234 (234)
.|.+||+++||+|+|+
T Consensus 684 ~V~~QLr~~GvLE~ir 699 (1052)
T 4anj_A 684 QILSQLQCSGMVSVLD 699 (1052)
T ss_dssp HHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHhhHHHHHH
Confidence 9999999999999874
No 4
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=1.6e-57 Score=438.26 Aligned_cols=227 Identities=26% Similarity=0.301 Sum_probs=183.9
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
+.||||||||||||||||++|++++|+.||+||.+|||+|..|+|.||++|||||+++ .|||+||||||++|++|
T Consensus 445 ~~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~DN~~~idLie~~-~GIlslLDEec~~p~~t---- 519 (795)
T 1w7j_A 445 EINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGS---- 519 (795)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCCCHHHHHHHHST-TSHHHHHHHHHTSTTCC----
T ss_pred CcCCHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCcccccCccccHHHHHHHHhc-CCHHHhhhhhccCCCCC----
Confidence 4699999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred chhHHHHHhcccc-CCCCCccccc----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCc-HHHHHHhhcCCc
Q psy17060 81 LNSRTIRCVCSWS-RGNPMVSCVF----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSS-MAFVRELVGADP 154 (234)
Q Consensus 81 ~d~~fl~kl~~~~-~~~~~~~~~~----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~-~~~v~~Lf~~~~ 154 (234)
|++|++||+..| ++|++|..+. .|.+.||||+|+| +++||++||+|.++++++.+|+.|+ ++||+.||....
T Consensus 520 -D~~f~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y-~~~gfleKNkD~l~~~~~~ll~~S~~~~~v~~lf~~~~ 597 (795)
T 1w7j_A 520 -DDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEY-QCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEE 597 (795)
T ss_dssp -HHHHHHHHHHHHTTTCTTEECCTTCSSEEEEECSSCEEEE-ECTTHHHHHHCCCCHHHHHHHHTCSSCSHHHHTTC---
T ss_pred -hHHHHHHHHHHhhccCCccccCCCCCCceEEEecceEEEE-echhHHhhccccccHHHHHHHHhccccHHHHHHhcccc
Confidence 999999999998 8999986643 4789999999999 9999999999999999999999999 999999998754
Q ss_pred cchh--hhhHHhhhhccccch----hhh-hhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccc
Q psy17060 155 VAVF--RWAIVRAFFRGLFAF----QEA-GRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFS 219 (234)
Q Consensus 155 ~~~~--~~~~~~~~~~~~~~~----~~~-g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~ 219 (234)
.... ......+...+..+. ... +.+.++..+...+|+.+|++||++| ||||||..+.|+.||...
T Consensus 598 ~~~~~~~~~~s~~~~~s~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~ 677 (795)
T 1w7j_A 598 KAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKR 677 (795)
T ss_dssp ------------------------------------CCHHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHH
T ss_pred ccccccccccccccccccccccccccccccccCCCCCcHHHHHHHHHHHHHHHHhcCCCeEEEEeCCCCcCChhhcCccc
Confidence 3211 000000000000000 000 0111122233567888999999998 999999999999999999
Q ss_pred hhhhhhhcchhhhhC
Q psy17060 220 ASGVRNALSLVKIIE 234 (234)
Q Consensus 220 v~~Ql~~~~i~~~~~ 234 (234)
|.+||+++||+|.|+
T Consensus 678 V~~QLr~~GvlE~ir 692 (795)
T 1w7j_A 678 AVQQLRACGVLETIR 692 (795)
T ss_dssp HHHHHHHTTHHHHHH
T ss_pred ccchhhhCChHHHHH
Confidence 999999999999874
No 5
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=2.6e-57 Score=435.37 Aligned_cols=217 Identities=24% Similarity=0.334 Sum_probs=182.1
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccc-cChHHHHHHhhcCCCchhhhhHHHhhhhcccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGA 79 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~ 79 (234)
+.||||||||||||||||++|++++|+.||+||.+|||+|..|+| .||++|+|||++ |.|||+||||||++|++|
T Consensus 469 ~~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~~Dn~~~idLiek-p~Gil~lLDEec~~p~~t--- 544 (783)
T 4db1_A 469 DFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEK-PMGIMSILEEECMFPKAT--- 544 (783)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCGGGGGHHHHHHHHS-TTSHHHHHCC-TTCTTCC---
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCCcccccccCChHHHHHHHhC-CCchHhhhhHHhcCCCCC---
Confidence 479999999999999999999999999999999999999999999 599999999995 789999999999999999
Q ss_pred cchhHHHHHhcccc-CCCCCccccc--------cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhh
Q psy17060 80 ILNSRTIRCVCSWS-RGNPMVSCVF--------WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELV 150 (234)
Q Consensus 80 ~~d~~fl~kl~~~~-~~~~~~~~~~--------~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf 150 (234)
|.+|++||++.| ++|++|..+. .|.+.||||+|+| +++||++||+|.++++++.+|++|++++|+.||
T Consensus 545 --D~tf~~kl~~~~~~~~~~f~~~~~~k~~~~~~F~I~HyAG~V~Y-~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~lf 621 (783)
T 4db1_A 545 --DMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVDY-NIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLF 621 (783)
T ss_dssp --HHHHHHHHHHHHTTTCTTEECCCC----C-CCEEEEETTEEEEE-CCTTHHHHHHCCCCHHHHHHHHTCSSHHHHHHH
T ss_pred --HHHHHHHHHHHhcCCCCCccCCCCCCCCCCCCeEEeCcCCceEE-eCcChhhhccccccHHHHHHHHHCccHHHHHHh
Confidence 999999999876 8888885432 3788999999999 999999999999999999999999999999999
Q ss_pred cCCccchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhh
Q psy17060 151 GADPVAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASG 222 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~ 222 (234)
+....... +. ..+.. .+..+. ...+...+|+.||+.||++| ||||||..+.|+.||...|.+
T Consensus 622 ~~~~~~~~--~~----~~~~~-~~~~~~---~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~ 691 (783)
T 4db1_A 622 ANYAGADA--PI----EKGKG-KAKKGS---SFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMH 691 (783)
T ss_dssp HSCC----------------------------CCCHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCTTCCCHHHHHH
T ss_pred hccccccc--cc----cCccC-CCCcCC---CCccHHHHHHHHHHHHHHHHHccCCEEEEeeCCCcccCCCcccchhhhe
Confidence 86532210 00 00000 000000 11233567778999999988 999999999999999999999
Q ss_pred hhhhcchhhhhC
Q psy17060 223 VRNALSLVKIIE 234 (234)
Q Consensus 223 Ql~~~~i~~~~~ 234 (234)
||+++||+|+|+
T Consensus 692 QLr~~GvlE~ir 703 (783)
T 4db1_A 692 QLRCNGVLEGIR 703 (783)
T ss_dssp HHHHSSHHHHHH
T ss_pred eccccChHhhee
Confidence 999999999874
No 6
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=9.7e-57 Score=430.38 Aligned_cols=210 Identities=26% Similarity=0.380 Sum_probs=182.8
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccc-cChHHHHHHhhcC-CCchhhhhHHHhhhhccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK-PNGLLCVLDDQAKIRRKFVG 78 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~-p~Gll~lLdee~~~~~~t~~ 78 (234)
+.||||||||||||||||++|++++|+.||+||.+|||+|..|+| .||++|+|||+++ |.|||+||||||++|++|
T Consensus 462 ~~NsFEQlCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek~~p~GilslLDEec~~p~~t-- 539 (770)
T 1w9i_A 462 KVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT-- 539 (770)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGGGHHHHHHHHCTTTTCHHHHHHHHHSSSSCC--
T ss_pred ccCCHHHHHHHhhHHHHHHHHHhhhhHHHHHHhhccCCCceeeccccCcHHHHHHHhCCCCCchhhhhhhhhCCCCCC--
Confidence 479999999999999999999999999999999999999999999 5999999999984 899999999999999999
Q ss_pred ccchhHHHHHhc-cccCCCCCcccc----ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCC
Q psy17060 79 AILNSRTIRCVC-SWSRGNPMVSCV----FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGAD 153 (234)
Q Consensus 79 ~~~d~~fl~kl~-~~~~~~~~~~~~----~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~ 153 (234)
|.+|++||. +++++|++|..+ ..|.+.||||+|+| +++||++||+|.++++++.+|+.|+++||+.||+..
T Consensus 540 ---D~~f~~kL~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y-~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~Lf~~~ 615 (770)
T 1w9i_A 540 ---DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMY-EIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDP 615 (770)
T ss_dssp ---HHHHHHHHHHHHTTTSTTEECCSSCSSEEEEEETTEEEEE-ECTTHHHHHHCCCCHHHHHHHHTCSSTTHHHHHHCH
T ss_pred ---hHHHHHHHHHHhcCCCCCccCCCCCCCceEeeccCccccc-cccChhhhccCcccHHHHHHHHhchHHHHHHHhhcc
Confidence 999999964 567888888554 34789999999999 999999999999999999999999999999999863
Q ss_pred ccchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhh
Q psy17060 154 PVAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRN 225 (234)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~ 225 (234)
.. + +. + ++.....+...+|+.+|+.||++| ||||||..+.|+.||...|.+||+
T Consensus 616 ~~---------~---~~---~---~k~~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr 677 (770)
T 1w9i_A 616 NI---------A---SR---A---KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLR 677 (770)
T ss_dssp HH---------H---CC---C---EETTEECCHHHHHHHHHHHHHHHHHTSEEEEEEEECSCSSCCSSCCCHHHHHHHHH
T ss_pred CC---------C---CC---C---CCCCCCcchhHHHHHHHHHHHHHHHhcCceeeeeecCCcccccCccCchhhHhHhc
Confidence 20 0 10 0 000011223456777899999888 999999999999999999999999
Q ss_pred hcchhhhhC
Q psy17060 226 ALSLVKIIE 234 (234)
Q Consensus 226 ~~~i~~~~~ 234 (234)
++||+|.|+
T Consensus 678 ~~GvlE~ir 686 (770)
T 1w9i_A 678 CNGVLEGIR 686 (770)
T ss_dssp HSSHHHHHH
T ss_pred ccchHHHHH
Confidence 999999874
No 7
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=3.9e-56 Score=430.48 Aligned_cols=214 Identities=27% Similarity=0.393 Sum_probs=178.7
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccc-cChHHHHHHhhcCCCchhhhhHHHhhhhcccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGA 79 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~ 79 (234)
+.|||||||||||||+||++|++++|+.||+||.+|||+|..|+| .||++|+|||++ |.|||+||||||++|++|
T Consensus 468 ~~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek-p~GIlslLDEec~~p~~t--- 543 (837)
T 1kk8_A 468 DFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKAD--- 543 (837)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHHHHHHHS-TTSHHHHHHHHTTCTTCC---
T ss_pred ccccHHHHHHHHhhHHHHHHHHHhhhHHHHHHhhhcCCceeecccccCHHHHHHHHhc-CCcHHHHHHHHhcCCCCC---
Confidence 469999999999999999999999999999999999999999999 599999999996 889999999999999999
Q ss_pred cchhHHHHHhc-cccCCCCCcccc----------ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHH
Q psy17060 80 ILNSRTIRCVC-SWSRGNPMVSCV----------FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRE 148 (234)
Q Consensus 80 ~~d~~fl~kl~-~~~~~~~~~~~~----------~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~ 148 (234)
|.+|++||. +++++|++|..+ ..|.+.||||+|+| +++||++||+|.++++++.+|+.|+++||+.
T Consensus 544 --D~tf~~kl~~~~~~~~~~f~~p~~~~~k~~~~~~F~I~HyAG~V~Y-~~~gfleKNkD~l~~~~~~ll~~S~~~~v~~ 620 (837)
T 1kk8_A 544 --DKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPY-SITGWLEKNKDPINENVVALLGASKEPLVAE 620 (837)
T ss_dssp --HHHHHHHHHHHHTTTCSSEECCCSCSSTTCCCCSEEEEETTEEEEE-CCSSHHHHHSCCCCHHHHHHHHTCSSHHHHH
T ss_pred --hHHHHHHHHHHhcCCCcCccCCCccccccccCCceEEeeccCcccc-cHHHHHHhccccccHHHHHHHHhchHHHHHH
Confidence 999999964 567888888543 24788899999999 9999999999999999999999999999999
Q ss_pred hhcCCccchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccch
Q psy17060 149 LVGADPVAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSA 220 (234)
Q Consensus 149 Lf~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v 220 (234)
||+...... + .+. +..+.. ....+...+|+.+|++||++| ||||||..+.|+.||...|
T Consensus 621 Lf~~~~~~~---g------~~~---~~k~~~-~~~~Tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V 687 (837)
T 1kk8_A 621 LFKAPEEPA---G------GGK---KKKGKS-SAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELV 687 (837)
T ss_dssp HTCC-------------------------------CCHHHHHHHHHHHHHHHHTTEEEEEEEEECCCSSCCTTCCCHHHH
T ss_pred Hhccccccc---C------CCC---CCCCCC-CCCCchHHHHHHHHHHHHHHHHccCCeeeeeeCCCccCCcccccchhe
Confidence 998743111 0 000 000000 011223457778999999998 9999999999999999999
Q ss_pred hhhhhhcchhhhhC
Q psy17060 221 SGVRNALSLVKIIE 234 (234)
Q Consensus 221 ~~Ql~~~~i~~~~~ 234 (234)
.+||+++||+|.|+
T Consensus 688 ~~QLr~~GvlE~ir 701 (837)
T 1kk8_A 688 LHQLQCNGVLEGIR 701 (837)
T ss_dssp HHHHTTSSSCC---
T ss_pred eeeccccCccHHHH
Confidence 99999999999874
No 8
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=7.1e-56 Score=439.57 Aligned_cols=227 Identities=26% Similarity=0.301 Sum_probs=184.3
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccccChHHHHHHhhcCCCchhhhhHHHhhhhccccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDDQAKIRRKFVGAI 80 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~~dn~~~ldli~~~p~Gll~lLdee~~~~~~t~~~~ 80 (234)
+.|||||||||||||+||++|++++|+.|++||.+|||+|..|+|.||++|||||+++ .|||+||||||++|++|
T Consensus 445 ~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dn~~~idlie~~-~Gil~lLdee~~~p~~t---- 519 (1080)
T 2dfs_A 445 EINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGS---- 519 (1080)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCCCCCHHHHHHHHST-TSHHHHHHHHTTSTTCC----
T ss_pred CcCCHHHHHHHhhhHHHHHHHHHHhhHHHHHHHhhcCCccccccccccHHHHHHHhcC-CceeeeccccccCCCCC----
Confidence 4699999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred chhHHHHHhcccc-CCCCCccccc----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhC-cHHHHHHhhcCCc
Q psy17060 81 LNSRTIRCVCSWS-RGNPMVSCVF----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNS-SMAFVRELVGADP 154 (234)
Q Consensus 81 ~d~~fl~kl~~~~-~~~~~~~~~~----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S-~~~~v~~Lf~~~~ 154 (234)
|.+|++||+..| ++|++|..+. .|.+.||||+|+| +++||++||+|.++++++.+|+.| +++||+.||+...
T Consensus 520 -D~~f~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y-~~~gfleKN~D~l~~~~~~ll~~S~~~~~v~~lf~~~~ 597 (1080)
T 2dfs_A 520 -DDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEY-QCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEE 597 (1080)
T ss_dssp -HHHHHHHHHHHHBTTBSSEECCTTCSSEEEEECSSCEEEE-ECTTHHHHHBCCCCHHHHHHHHTCSSCSHHHHSCC---
T ss_pred -hHHHHHHHHHHhhcCCCCccCCCCCCCceEEEecceEEEE-ehhhHHHhccccccHHHHHHHHcccccHHHHHHhcccc
Confidence 999999999998 8999986542 4789999999999 999999999999999999999999 9999999998754
Q ss_pred cchh--hhhHHhhhhccccch----hhh-hhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccc
Q psy17060 155 VAVF--RWAIVRAFFRGLFAF----QEA-GRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFS 219 (234)
Q Consensus 155 ~~~~--~~~~~~~~~~~~~~~----~~~-g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~ 219 (234)
.... ......+...+..+. ..+ +...++..+...+|+.+|+.||++| |||+||..+.|+.||...
T Consensus 598 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~ 677 (1080)
T 2dfs_A 598 KAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKR 677 (1080)
T ss_dssp ----------------------------------CCCBHHHHHHHHHHHHHHHHHSSEEEEEEEECCCSSCCTTCCCHHH
T ss_pred cccccccccccccccccccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhcCCeeEEEecCCCCCCchhcCHHh
Confidence 3211 000000000000000 000 1111222334567888999999998 999999999999999999
Q ss_pred hhhhhhhcchhhhhC
Q psy17060 220 ASGVRNALSLVKIIE 234 (234)
Q Consensus 220 v~~Ql~~~~i~~~~~ 234 (234)
|.+||+++||+|.|+
T Consensus 678 V~~QLr~~GvlE~ir 692 (1080)
T 2dfs_A 678 AVQQLRACGVLETIR 692 (1080)
T ss_dssp HHHHHHTTTHHHHHH
T ss_pred hHHHHhhcccHHHHh
Confidence 999999999999874
No 9
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=3.7e-55 Score=431.58 Aligned_cols=222 Identities=25% Similarity=0.331 Sum_probs=186.1
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccc-cChHHHHHHhhc--CCCchhhhhHHHhhhhcccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG--KPNGLLCVLDDQAKIRRKFV 77 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~--~p~Gll~lLdee~~~~~~t~ 77 (234)
+.|||||||||||||+||++|++++|+.|++||.+|||+|..|+| .||++|||||++ +|.|||+||||||++|++|
T Consensus 441 ~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~Gil~lLdee~~~p~~t- 519 (995)
T 2ycu_A 441 QLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKAT- 519 (995)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSCCHHHHHHHSSSSTTCC-
T ss_pred ccchHHHHHHHhhHHHHHHHHHHhhhHHHHHHHhccCCCccccccccChHHHHHHHhccCCCCchhhhhHHHhcCCCCc-
Confidence 369999999999999999999999999999999999999999999 699999999997 4899999999999999999
Q ss_pred cccchhHHHHHhccccCCCCCcccc------ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhc
Q psy17060 78 GAILNSRTIRCVCSWSRGNPMVSCV------FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVG 151 (234)
Q Consensus 78 ~~~~d~~fl~kl~~~~~~~~~~~~~------~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~ 151 (234)
|.+|++||...|++|++|..+ ..|.+.||||+|+| +++||++||+|.++++++.+|+.|+++||+.||+
T Consensus 520 ----D~~f~~kl~~~~~~~~~f~~~~~~~~~~~F~i~HyAG~V~Y-~~~gfleKN~D~l~~~~~~ll~~S~~~~v~~lf~ 594 (995)
T 2ycu_A 520 ----DKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDY-KANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWK 594 (995)
T ss_dssp ----HHHHHHHHHHHHTTSTTEECCCTTTCCSSEEEEETTEEEEE-CCTTHHHHHHCCCCHHHHHHHHTCSSHHHHHHTS
T ss_pred ----hHHHHHHHHHhcCCCCCcccCCccCCCCeeEEECCCCCccc-cccchhhhccccccHHHHHHHHhCcHHHHHHHhh
Confidence 999999999999999988653 24788999999999 9999999999999999999999999999999998
Q ss_pred CCccchhhhhHHhhhhccccchhhhhhhhh--ccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchh
Q psy17060 152 ADPVAVFRWAIVRAFFRGLFAFQEAGRRYR--EEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSAS 221 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~r--~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~ 221 (234)
........... .|. .....|.+.+ ...+...+|+.+|+.||++| ||||||..+.|+.||...|.
T Consensus 595 ~~~~~~~~~~~-----~~~-~~~~~g~~~~~~~~~tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~ 668 (995)
T 2ycu_A 595 DVEGIVGLEQV-----SSL-GDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVL 668 (995)
T ss_dssp SCCSSCSCCC-------------------CCCSSCCHHHHHHHHHHHHHHHHHTSEEEEEEEECCCSSCCTTCCCTTTHH
T ss_pred ccccccccccc-----ccc-cccccccCcCCCCCCchHHHHHHHHHHHHHHHHhcCcceeeeecCCccccccccCHHHHH
Confidence 75321100000 000 0000011111 11223567778999999998 99999999999999999999
Q ss_pred hhhhhcchhhhhC
Q psy17060 222 GVRNALSLVKIIE 234 (234)
Q Consensus 222 ~Ql~~~~i~~~~~ 234 (234)
+||+++||+|.|+
T Consensus 669 ~QLr~~GvlE~ir 681 (995)
T 2ycu_A 669 DQLRCNGVLEGIR 681 (995)
T ss_dssp HHHHHHTHHHHHH
T ss_pred HHhcccchHHHHH
Confidence 9999999999874
No 10
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=5.8e-55 Score=430.07 Aligned_cols=210 Identities=26% Similarity=0.354 Sum_probs=184.9
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccc-cChHHHHHHhhc-CCCchhhhhHHHhhhhccccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG-KPNGLLCVLDDQAKIRRKFVG 78 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~-~p~Gll~lLdee~~~~~~t~~ 78 (234)
+.|||||||||||||+||++|++++|+.|++||.+|||+|..|+| .||++|||||++ +|.|||+||||||++|++|
T Consensus 462 ~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~~Gil~lLdee~~~p~~t-- 539 (1010)
T 1g8x_A 462 KVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT-- 539 (1010)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCSHHHHHHHHCTTTTCHHHHHHHHTTSSSCC--
T ss_pred CcCcHHHHHHHhhhHHHHHHHHHHhhHHHHHHhhccCCCccccccccChHHHHHHHhcCCCCeeehhhhHHhCCCCCC--
Confidence 469999999999999999999999999999999999999999999 599999999998 4999999999999999999
Q ss_pred ccchhHHHHHhccccC-CCCCccccc----cccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhcCC
Q psy17060 79 AILNSRTIRCVCSWSR-GNPMVSCVF----WMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVGAD 153 (234)
Q Consensus 79 ~~~d~~fl~kl~~~~~-~~~~~~~~~----~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~~~ 153 (234)
|.+|++|++++++ +|+.|..+. .|.+.||||+|+| +++||++||+|.++++++.+|+.|+++||+.||+..
T Consensus 540 ---d~~f~~kl~~~~~~~~~~f~~~~~~~~~F~i~HyAG~V~Y-~~~gfleKN~D~l~~~~~~ll~~S~~~~~~~lf~~~ 615 (1010)
T 1g8x_A 540 ---DNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMY-EIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDP 615 (1010)
T ss_dssp ---HHHHHHHHHHHHTTTCTTEECCTTCSSEEEEEETTEEEEE-ECTTHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHCH
T ss_pred ---hHHHHHHHHHHhcCCCCCcccCCCCCCCEEEeeeceEEEE-eecCccccccccccHHHHHHHHhCcHHHHHHHhccc
Confidence 9999999999998 899886542 4789999999999 999999999999999999999999999999999863
Q ss_pred ccchhhhhHHhhhhccccchhhhhhhhhccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccchhhhhh
Q psy17060 154 PVAVFRWAIVRAFFRGLFAFQEAGRRYREEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFSASGVRN 225 (234)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~v~~Ql~ 225 (234)
. .. +. . .+.....+...+|+.+|+.||++| ||||||..+.|+.||...|.+||+
T Consensus 616 ~-~~-----------~~-----~-~k~~~~~tv~~~fk~sL~~Lm~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr 677 (1010)
T 1g8x_A 616 N-IA-----------SR-----A-KKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLR 677 (1010)
T ss_dssp H-HH-----------SC-----C-CCSSSCCCHHHHHHHHHHHHHHHHTTSEEEEEEEECSCSSCCTTCCCHHHHHHHHH
T ss_pred c-cc-----------cC-----C-CCCCCCCchHHHHHHHHHHHHHHHHhcCCeeeeeecCCcccccCCcChhhcchhcc
Confidence 2 00 00 0 000011223456777999999988 999999999999999999999999
Q ss_pred hcchhhhhC
Q psy17060 226 ALSLVKIIE 234 (234)
Q Consensus 226 ~~~i~~~~~ 234 (234)
++||+|.|+
T Consensus 678 ~~GvlE~ir 686 (1010)
T 1g8x_A 678 CNGVLEGIR 686 (1010)
T ss_dssp HSSHHHHHH
T ss_pred cCccHHHHH
Confidence 999999873
No 11
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=100.00 E-value=1.9e-54 Score=435.09 Aligned_cols=222 Identities=22% Similarity=0.305 Sum_probs=185.2
Q ss_pred CCccchhhhhhhhhhHHHHHHHHhhhhhhHHHHhhhCCCcccccc-cChHHHHHHhhcC--CCchhhhhHHHhhhhcccc
Q psy17060 1 MSLLFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK--PNGLLCVLDDQAKIRRKFV 77 (234)
Q Consensus 1 ~~NsfeqlciNy~nE~Lq~~f~~~~f~~e~~~y~~EgI~~~~i~~-~dn~~~ldli~~~--p~Gll~lLdee~~~~~~t~ 77 (234)
+.|||||||||||||+||++|++++|+.|+++|.+|||+|..|+| .||++|||||+++ |.|||+||||||++|++|
T Consensus 472 ~~NsfeQlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil~lLdee~~~p~~t- 550 (1184)
T 1i84_S 472 EINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKAT- 550 (1184)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHHHHHHHTTSCTTCC-
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCccccccCCCcHHHHHHHhCCCCCCCchhhhhhhhCCCCCC-
Confidence 369999999999999999999999999999999999999999999 5999999999963 349999999999999999
Q ss_pred cccchhHHHHHhccccCCCCCcccc------ccccCCCCCcceeecccccchHhhhccchHHHHHHHhhCcHHHHHHhhc
Q psy17060 78 GAILNSRTIRCVCSWSRGNPMVSCV------FWMIKPTGRGETQWSPVAEMREKNLDLMRGEIVGVLKNSSMAFVRELVG 151 (234)
Q Consensus 78 ~~~~d~~fl~kl~~~~~~~~~~~~~------~~~~~~~~aG~V~Y~~v~gfi~kN~D~l~~~~~~ll~~S~~~~v~~Lf~ 151 (234)
|.+|++||+..|++|++|..+ ..|.+.||||+|+| +++||++||+|+++++++.+|+.|+++||+.||+
T Consensus 551 ----d~~~~~kl~~~~~~~~~~~~~~~~~~~~~F~i~Hyag~V~Y-~~~gfl~kN~d~l~~~~~~ll~~s~~~~~~~lf~ 625 (1184)
T 1i84_S 551 ----DTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTY-NASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWK 625 (1184)
T ss_dssp ----HHHHHHHHHHHTSSCTTEEECSSCTTTCEEEEECSSCEEEE-ECTTHHHHHHCCCCHHHHHHHHTCSCHHHHHHHS
T ss_pred ----hHHHHHHHHHHhCCCCCccCCCCCCCCCcEEEECCCceEEe-ccCCchhhccCcccHHHHHHHHhCchHHHHHHhc
Confidence 999999999999999999654 24789999999999 9999999999999999999999999999999998
Q ss_pred CCccchhhhhHHhhhhccccchhhhhh--hhh--ccccchhhhhchHHHHhhcc--------ccCCCCCCCCCCCccccc
Q psy17060 152 ADPVAVFRWAIVRAFFRGLFAFQEAGR--RYR--EEKGEQNREATSVAEWLSHE--------ACTPEVPGSIPGGVEVFS 219 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~r--~~~~~~~~~~~~l~~l~~~l--------rci~pn~~~~p~~fD~~~ 219 (234)
............ ++ .....|. +.+ ...+...+|+.+|+.||++| |||+||..+.|+.||...
T Consensus 626 ~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~tv~~~f~~~l~~L~~~l~~t~phfvRCIkPN~~k~p~~fd~~~ 699 (1184)
T 1i84_S 626 DVDRIVGLDQMA-----KM-TESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHL 699 (1184)
T ss_dssp CCTTCCCC---------------------------CCCHHHHHHHHHHHHHHHHTTSEEEECCEECCCSSCCSSCCCHHH
T ss_pred cccccccccccc-----cc-cccccCccccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceeeeCCCCcCCCCcccHHH
Confidence 754221000000 00 0000010 111 11233567778999999998 999999999999999999
Q ss_pred hhhhhhhcchhhhhC
Q psy17060 220 ASGVRNALSLVKIIE 234 (234)
Q Consensus 220 v~~Ql~~~~i~~~~~ 234 (234)
|.+||+++||+|+|+
T Consensus 700 V~~QLr~~GvlE~ir 714 (1184)
T 1i84_S 700 VLEQLRCNGVLEGIR 714 (1184)
T ss_dssp HHHHHHHTTHHHHHH
T ss_pred HHHHHhhcCchHHHH
Confidence 999999999999874
Done!