BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17068
(157 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P71590|FHAA_MYCTU FHA domain-containing protein FhaA OS=Mycobacterium tuberculosis
GN=fhaA PE=1 SV=1
Length = 527
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 33/49 (67%), Gaps = 5/49 (10%)
Query: 58 YRNQIRGYRDQNHGYREQNRGYREQNRGYRDHNRGYREQKRGYREQNRG 106
Y QI GY DQ GY EQ RGY EQ RGY D RGY++Q RGY +Q +G
Sbjct: 226 YPEQI-GYPDQG-GYPEQ-RGYPEQ-RGYPDQ-RGYQDQGRGYPDQGQG 269
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 44 DRDQNRGYHNQNRGYRNQIRGYRDQNHGYREQNRGYREQNRGYRDHNRG 92
D + GY +Q GY Q RGY +Q GY +Q RGY++Q RGY D +G
Sbjct: 225 DYPEQIGYPDQG-GYPEQ-RGYPEQ-RGYPDQ-RGYQDQGRGYPDQGQG 269
>sp|Q9C698|FPP6_ARATH Filament-like plant protein 6 OS=Arabidopsis thaliana GN=FPP6 PE=2
SV=1
Length = 1054
Score = 37.7 bits (86), Expect = 0.026, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 34 TLDQYLSCHTDRDQNRGYHNQNRGYRNQIRGYRDQNHGYREQNRGYREQNRGYRDHNRGY 93
+++QY +Q + Y Q +GY Q++ Y +Q Y EQ + + EQ Y + Y
Sbjct: 45 SVEQYTHFTGLEEQIKSYDVQIKGYDVQVKTYENQVESYEEQVKDFEEQIDAYDEKVHEY 104
Query: 94 REQKRGYREQNRGYRDQNADIAIKTADTANKSAV 127
EQ ++ N D N +++ + K A+
Sbjct: 105 EEQ---VQKLNEDVEDLNEKLSVANEEIVTKEAL 135
>sp|Q9FFQ1|RH31_ARATH DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana
GN=RH31 PE=2 SV=2
Length = 716
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 44 DRDQNRGYHNQNRGYRNQIRGYRDQNHGY-REQNRGYREQNRGYRDHNRGYREQKRGY-R 101
+ D++RG + + RG RNQ+ +R++ +G RE+ R Q + RG +E R
Sbjct: 108 EEDRSRGRNQEKRGIRNQVDSFRNKRYGGDRERGFNSRIQGKSSEASFRGRKETSFSRDR 167
Query: 102 EQNRGYRDQ 110
E +G R +
Sbjct: 168 EDEKGLRKR 176
>sp|P03748|VTFP_BPT7 Tail fiber protein OS=Enterobacteria phage T7 GN=17 PE=1 SV=1
Length = 553
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 59 RNQIRGYRDQNHGYREQNRGYREQNRGYRDHNRGYREQKRGYREQNRGYRD---QNADIA 115
RN+ +R++ +R Q G++ ++ + + +R++ +G+R++ + +++ Q A A
Sbjct: 165 RNEALQFRNEAETFRNQAEGFKNESSTNATNTKQWRDETKGFRDEAKRFKNTAGQYATSA 224
Query: 116 IKTADTANKSAVNANNIKENSHENLPLLKSQLSNSE 151
+A A++S VNA N S + L + Q +E
Sbjct: 225 GNSASAAHQSEVNAENSATASANSAHLAEQQADRAE 260
>sp|Q8R0T2|ZN768_MOUSE Zinc finger protein 768 OS=Mus musculus GN=Znf768 PE=2 SV=1
Length = 568
Score = 33.9 bits (76), Expect = 0.45, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 50 GYHNQNRGYRNQIRGYRDQNHGYREQNRGYREQNRGYRDHNRGYREQKRGYRE 102
GY +++ + +Q GY Q+ GY QN G QN ++ H+ + Q ++E
Sbjct: 151 GYGSKSPEFESQSPGYESQSPGYEPQNSGDGVQNSEFKTHSPEFETQSSKFQE 203
>sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens GN=DDX21 PE=1 SV=5
Length = 783
Score = 33.5 bits (75), Expect = 0.49, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 61 QIRGYRDQNHGYREQNRGYREQNRGYRDHNRGYREQKRGYREQNRGYRDQNADIAIKTAD 120
++ G R+ G+R Q G R RG RD NR +R G RE +RG R Q + K+
Sbjct: 713 ELEGPREGYGGFRGQREGSR-GFRGQRDGNRRFR----GQREGSRGPRGQRSGGGNKSNR 767
Query: 121 TANK 124
+ NK
Sbjct: 768 SQNK 771
>sp|C6KSQ6|RAD50_PLAF7 Probable DNA repair protein RAD50 OS=Plasmodium falciparum (isolate
3D7) GN=PFF0285c PE=3 SV=1
Length = 2236
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 46 DQNRGYHNQNRGYRNQIRGYRDQNHGYREQNRGYREQNRGYRDHNRGYREQKRGYREQNR 105
D N+ Y + N+ Y + + Y D N Y + N+ + N+ Y D N+ + + + N+
Sbjct: 1524 DTNKMYDDTNKMYDDTNKMYDDTNKMYDDTNKMCDDTNKRYDDTNKMCHDTNKMCDDTNQ 1583
Query: 106 GYRDQN 111
Y D N
Sbjct: 1584 MYDDTN 1589
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 46 DQNRGYHNQNRGYRNQIRGYRDQNHGYREQNRGYREQNRGYRDHNRGYREQKRGYREQNR 105
D N+ Y + N+ Y + + Y D N + N+ Y + N+ D N+ + + Y + N+
Sbjct: 1531 DTNKMYDDTNKMYDDTNKMYDDTNKMCDDTNKRYDDTNKMCHDTNKMCDDTNQMYDDTNK 1590
Query: 106 GYRDQN 111
Y D N
Sbjct: 1591 RYDDTN 1596
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 46 DQNRGYHNQNRGYRNQIRGYRDQNHGYREQNRGYREQNRGYRDHNRGYREQKRGYREQNR 105
D N+ + N+ + + Y D N Y + N+ Y + N+ Y D N+ + + Y + N+
Sbjct: 1510 DTNKMCDDTNKMCDDTNKMYDDTNKMYDDTNKMYDDTNKMYDDTNKMCDDTNKRYDDTNK 1569
Query: 106 GYRDQN 111
D N
Sbjct: 1570 MCHDTN 1575
>sp|P02977|M5_STRP5 M protein, serotype 5 OS=Streptococcus pyogenes serotype M5 GN=emm5
PE=1 SV=2
Length = 492
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
Query: 33 DTLDQY-LSCHTDRDQNRGYHNQNRGYRNQIRGYRDQNHGYREQNRGYREQNRGYRDHNR 91
+ LD+Y L H + +N G +N G + + G + +N G + + + + +N +
Sbjct: 57 EALDKYELENHDLKTKNEGLKTENEGLKTENEGLKTENEGLKTEKKEHEAENDKLKQQRD 116
Query: 92 GYREQKRGYREQNRGYRDQNADIAIKTADTA---NKSAVNANNIKENSHENLPLLKSQLS 148
QK + + + N + IK D NK+ N ++ S EN L L
Sbjct: 117 TLSTQKETLEREVQNTQYNNETLKIKNGDLTKELNKTRQELANKQQESKENEKALNELLE 176
Query: 149 NS 150
+
Sbjct: 177 KT 178
Score = 30.0 bits (66), Expect = 6.3, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 30/63 (47%)
Query: 49 RGYHNQNRGYRNQIRGYRDQNHGYREQNRGYREQNRGYRDHNRGYREQKRGYREQNRGYR 108
RG N + + + Y +NH + +N G + +N G + N G + + G + + + +
Sbjct: 46 RGTINDPQRAKEALDKYELENHDLKTKNEGLKTENEGLKTENEGLKTENEGLKTEKKEHE 105
Query: 109 DQN 111
+N
Sbjct: 106 AEN 108
>sp|Q9NQV7|PRDM9_HUMAN Histone-lysine N-methyltransferase PRDM9 OS=Homo sapiens GN=PRDM9
PE=2 SV=2
Length = 894
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 45 RDQNRGYHNQNRGYRNQIRGYRDQNHGYREQNRGYREQNRGYRDHNRGYREQKRGYREQN 104
R+ RG+ N++ R+Q ++ + RE RG+R+++ R E+ RE
Sbjct: 723 RECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLRHQRTHTGEKPYVCRECG 782
Query: 105 RGYRDQNADIAIKTADTANKSAV 127
RG+RD++ ++ + T K V
Sbjct: 783 RGFRDKSNLLSHQRTHTGEKPYV 805
>sp|Q9H5H4|ZN768_HUMAN Zinc finger protein 768 OS=Homo sapiens GN=ZNF768 PE=1 SV=2
Length = 540
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 29/59 (49%)
Query: 68 QNHGYREQNRGYREQNRGYRDHNRGYREQKRGYREQNRGYRDQNADIAIKTADTANKSA 126
Q+ + Q+ Y Q+ GY + GY + GY ++ Y QN ++ ++ + +S+
Sbjct: 110 QSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTELKTQSPEFEAQSS 168
>sp|P10308|VTFP_BPT3 Tail fiber protein OS=Enterobacteria phage T3 GN=17 PE=4 SV=1
Length = 557
Score = 29.3 bits (64), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 53 NQNRGYRNQIRGYRDQNHGYREQNRGYREQNRGYRDHNRGYREQKRGYREQNRGYRDQNA 112
N+ +RN+ +R+Q ++ ++ + +RD G R++ EQ + Q A
Sbjct: 166 NEALQFRNEAETFRNQTEVFKNESGTNATNTKQWRDEANGSRDEA----EQFKNTAGQYA 221
Query: 113 DIAIKTADTANKSAVNANN 131
A +A TA +S VNA N
Sbjct: 222 TSAGNSATTATQSEVNAEN 240
>sp|Q8N9W4|GG6L2_HUMAN Golgin subfamily A member 6-like protein 2 OS=Homo sapiens
GN=GOLGA6L2 PE=2 SV=2
Length = 650
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 68 QNHGYREQNRGYREQNRGYRDHNRGYREQKRGYREQNRGYRDQN 111
Q REQ REQ R + REQ++ REQ + R+Q
Sbjct: 298 QEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQK 341
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,117,612
Number of Sequences: 539616
Number of extensions: 2705907
Number of successful extensions: 9792
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 236
Number of HSP's that attempted gapping in prelim test: 7223
Number of HSP's gapped (non-prelim): 1742
length of query: 157
length of database: 191,569,459
effective HSP length: 108
effective length of query: 49
effective length of database: 133,290,931
effective search space: 6531255619
effective search space used: 6531255619
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)