BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17073
(219 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZJK8|TCPH_CHICK T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1
Length = 553
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/116 (81%), Positives = 104/116 (89%)
Query: 99 DLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEME 158
D +N F+GC A+TCTII+RGGAEQF+EETERSLHDAIMIVRR I+N +VVAGGGAIEME
Sbjct: 356 DRYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEME 415
Query: 159 LSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
LSK LRDYSR+I GK+QLLIGA AKA E+IPRQL DNAGFDATNILNKLR KHAQG
Sbjct: 416 LSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRAKHAQG 471
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 83/103 (80%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV LLA E LKQVKPYVEEG+HP+I+I+A R AT +A+ KI ++AV ++K D
Sbjct: 90 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKDIAVSVKKEDKD 149
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDDLFNV 103
E R LLEKCAATALSSKLI Q K FFSKMVVDAVM LDDL +
Sbjct: 150 EQRSLLEKCAATALSSKLISQSKEFFSKMVVDAVMMLDDLLQL 192
>sp|Q2NKZ1|TCPH_BOVIN T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=1 SV=1
Length = 543
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/114 (80%), Positives = 103/114 (90%)
Query: 101 FNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELS 160
+N F+GC A+TCTII+RGGAEQF+EETERSLHDAIMIVRR I+N +VVAGGGAIEMELS
Sbjct: 358 YNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELS 417
Query: 161 KALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
K LRDYSR+I GK+QLLIGA AKA E+IPRQL DNAGFDATNILNKLR +HAQG
Sbjct: 418 KYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG 471
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 95/130 (73%), Gaps = 11/130 (8%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV LLA E LKQVKPYVEEG+HP+I+I+A R AT +A+ KI E+AV ++K D
Sbjct: 90 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKV 149
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDDLFNV-FSGCKNARTCTIIVRG 119
E R LLEKCA TALSSKLI QQK FF+KMVVDAVM LDDL + G K V+G
Sbjct: 150 EQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKK-------VQG 202
Query: 120 GAEQFLEETE 129
GA LEE++
Sbjct: 203 GA---LEESQ 209
>sp|P80313|TCPH_MOUSE T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1
Length = 544
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/114 (80%), Positives = 103/114 (90%)
Query: 101 FNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELS 160
+N F+GC A+TCTII+RGGAEQF+EETERSLHDAIMIVRR I+N +VVAGGGAIEMELS
Sbjct: 358 YNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELS 417
Query: 161 KALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
K LRDYSR+I GK+QLLIGA AKA E+IPRQL DNAGFDATNILNKLR +HAQG
Sbjct: 418 KYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG 471
Score = 143 bits (361), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 95/130 (73%), Gaps = 11/130 (8%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV LLA E LKQVKPYVEEG+HP+I+I+A R AT +A+ KI E+AV ++K D
Sbjct: 90 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKQDKV 149
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDDLFNV-FSGCKNARTCTIIVRG 119
E R +LEKCA TALSSKLI QQK FF+KMVVDAVM LD+L + G K V+G
Sbjct: 150 EQRKMLEKCAMTALSSKLISQQKVFFAKMVVDAVMMLDELLQLKMIGIKK-------VQG 202
Query: 120 GAEQFLEETE 129
GA LEE++
Sbjct: 203 GA---LEESQ 209
>sp|Q99832|TCPH_HUMAN T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2
Length = 543
Score = 201 bits (510), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 91/114 (79%), Positives = 102/114 (89%)
Query: 101 FNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELS 160
+N F+GC A+TCT I+RGGAEQF+EETERSLHDAIMIVRR I+N +VVAGGGAIEMELS
Sbjct: 358 YNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELS 417
Query: 161 KALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
K LRDYSR+I GK+QLLIGA AKA E+IPRQL DNAGFDATNILNKLR +HAQG
Sbjct: 418 KYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG 471
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 84/103 (81%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV LLA E LKQVKPYVEEG+HP+I+I+A R AT +A+ KI E+AV ++K+D
Sbjct: 90 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKV 149
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDDLFNV 103
E R LLEKCA TALSSKLI QQK FF+KMVVDAVM LDDL +
Sbjct: 150 EQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQL 192
>sp|Q5R5C8|TCPH_PONAB T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1
Length = 543
Score = 200 bits (509), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 91/114 (79%), Positives = 102/114 (89%)
Query: 101 FNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELS 160
+N F+GC A+TCT I+RGGAEQF+EETERSLHDAIMIVRR I+N +VVAGGGAIEMELS
Sbjct: 358 YNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELS 417
Query: 161 KALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
K LRDYSR+I GK+QLLIGA AKA E+IPRQL DNAGFDATNILNKLR +HAQG
Sbjct: 418 KYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG 471
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 84/103 (81%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV LLA E LKQVKPYVEEG+HP+I+I+A R AT +A+ KI E+AV ++K+D
Sbjct: 90 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKV 149
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDDLFNV 103
E R LLEKCA TALSSKLI QQK FF+KMVVDAVM LDDL +
Sbjct: 150 EQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQL 192
>sp|P87153|TCPH_SCHPO Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cct7 PE=1 SV=1
Length = 558
Score = 176 bits (446), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 98/118 (83%)
Query: 99 DLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEME 158
D FN+F GC A+TCT+I+RGGA+QF+ E ERSLHDAIMIV+ ++N+ VVAGGGA EME
Sbjct: 361 DRFNLFEGCPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEME 420
Query: 159 LSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQGRL 216
LSK LRDYS +I+GK+Q I A A++ EVIPRQL DNAGFD+TNILNKLR +HA+G +
Sbjct: 421 LSKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHAKGEM 478
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 74/98 (75%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSVV+ AGE+L++ + +VE+GV ++I+ RKA +A+ KI E+A+ + SD G
Sbjct: 94 VGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEG 153
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLD 98
+ R LL KCA+TA++SKLI FF+KMVVDAV++LD
Sbjct: 154 KLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTLD 191
>sp|Q54ER7|TCPH_DICDI T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7
PE=3 SV=1
Length = 555
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/114 (71%), Positives = 99/114 (86%)
Query: 101 FNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELS 160
+N+F+GC +T TII+RGG EQF++E ERSLHD+IMIVRR ++ +VVAGGGAIEME+S
Sbjct: 358 YNLFTGCTMTQTATIILRGGGEQFIDEAERSLHDSIMIVRRARKHRSVVAGGGAIEMEVS 417
Query: 161 KALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
K LRDYS SI GK+QLLI A AKA EVIPRQ++DNAGFD+T+ILN+LRQKHAQG
Sbjct: 418 KYLRDYSLSIEGKKQLLINAFAKALEVIPRQIADNAGFDSTDILNQLRQKHAQG 471
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 76/99 (76%), Gaps = 3/99 (3%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSVV+LAGE LK KP++EEG+HP+I+I+A R A +A QKI EL+V I+ +
Sbjct: 93 VGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSACELAKQKIQELSVDIKPENMR 152
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
E+ LEKCA+T+++SKLI K FFSKMVVDAV LDD
Sbjct: 153 EF---LEKCASTSMNSKLIASHKQFFSKMVVDAVQLLDD 188
>sp|P42943|TCPH_YEAST T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CCT7 PE=1 SV=1
Length = 550
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/115 (65%), Positives = 95/115 (82%)
Query: 101 FNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELS 160
+N+F GC A+TCT+++RGGAEQ + E ERSLHDAIMIV+R ++N +VAGGGA EME+S
Sbjct: 362 YNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVS 421
Query: 161 KALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQGR 215
K LRDYS++IAGK+Q++I A AKA EVIPRQL +NAGFDA ILNKLR H++G
Sbjct: 422 KCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGE 476
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV +LAGE++K+ KP++EEG+ +++K RKA S+A++KI+ELAV I S+
Sbjct: 94 VGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDI-TSEKS 152
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLD 98
R LLE+CA TA+SSKLIH FF KM VDAV+SLD
Sbjct: 153 SGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLD 190
>sp|O77323|TCPH_PLAF7 T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate
3D7) GN=MAL3P3.6 PE=3 SV=1
Length = 539
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 89/113 (78%)
Query: 101 FNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELS 160
+N+F C ++ TII+RGGA+QF+EE ERS++DAIMIV R I N +V G G+IEM+LS
Sbjct: 360 YNIFKECLKTKSVTIILRGGAKQFIEEVERSINDAIMIVLRCITNSEIVPGAGSIEMQLS 419
Query: 161 KALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
K LR YSRSI KEQ+++ + AKA E IPR LS NAG+D+T+ILNKLR+KH++
Sbjct: 420 KYLRIYSRSICNKEQIVLFSFAKALESIPRHLSHNAGYDSTDILNKLRKKHSE 472
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 67/99 (67%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSVV++AGE+L + K + +G+ P ++I R A ++A+ K++EL++ +
Sbjct: 92 VGDGTTSVVVVAGELLNEAKGLLNDGIEPNMIIDGFRNACNVAINKLNELSLNFSNKNEE 151
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
E R +L KCA TAL+SKL+ K FF ++VV+AV L D
Sbjct: 152 EKRSILLKCAQTALNSKLVSNHKEFFGELVVNAVYKLGD 190
>sp|P54409|TCPH_TETPY T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1
Length = 558
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 89/112 (79%)
Query: 101 FNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELS 160
+N+F C ++++ TII+RGGAEQF+ E ERSL+DAIMIVRR ++ + +V GGGAIE+E+S
Sbjct: 358 YNLFQDCPHSKSATIILRGGAEQFIAEAERSLNDAIMIVRRCMKANKIVPGGGAIELEIS 417
Query: 161 KALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHA 212
+ LR +SR GK QL+I A AKA EVIP+ ++DNAG D+ +LNKLRQKHA
Sbjct: 418 RLLRLHSRKTEGKVQLVINAFAKALEVIPKTIADNAGHDSIQVLNKLRQKHA 469
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 6/127 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV LLAGE+LK+ K ++EEG+HP+IV K ++A +AL + E + + G
Sbjct: 89 VGDGTTSVCLLAGELLKESKNFIEEGMHPQIVTKGYKEALKLALTFLQENSYSVADKSDG 148
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLD------DLFNVFSGCKNARTCT 114
E R +L KCA T+L+SKL+ K FFS+MVV AV +LD DL + + T +
Sbjct: 149 EKREMLLKCAQTSLNSKLLAHYKEFFSEMVVQAVETLDTNLLDKDLIGIKMVTGGSVTDS 208
Query: 115 IIVRGGA 121
++V+G A
Sbjct: 209 VLVKGVA 215
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 81/118 (68%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ GCKN + TI++RGG+E ++E ERSL DAI +V+ + + VVAGGGA E+
Sbjct: 357 DEKMVFIEGCKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEI 416
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQGR 215
E++ +RD++ ++ G+EQL A A A EVIPR L++N+G D +IL +LR+ H +G+
Sbjct: 417 EVALKIRDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAHEEGK 474
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTT+ V+LAGE+LK+ + +++ +HP ++ + R A + A++ ++ +A+ I D
Sbjct: 93 VGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRMAANKAVEILESIAMDIDVEDE- 151
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVM----SLDDLFNV 103
L+K AATA++ K S +VV+AV +DD + V
Sbjct: 152 ---ETLKKIAATAITGKHSEYALDHLSSLVVEAVKRVAEKVDDRYKV 195
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 78/121 (64%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
DD GCKN + +I++RGG + + E ER+L+DAI +V T + + GGGA+E
Sbjct: 354 DDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEA 413
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQGRLK 217
EL+ L Y+ S+ G+EQL I A AKA E+IPR L++NAG D N L KL+ +H +GR+
Sbjct: 414 ELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAEHEKGRIS 473
Query: 218 I 218
+
Sbjct: 474 V 474
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTT+ V+L+GE+LKQ + +++GVHP ++ R A + A + IDE+A K +D
Sbjct: 92 VGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK--STDDA 149
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAV 94
R K A TALS K F + +VV AV
Sbjct: 150 TLR----KIALTALSGKNTGLSNDFLADLVVKAV 179
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 76/108 (70%)
Query: 107 CKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDY 166
CK+ + T+++RG E +EE R++ DAI +V TI + +VAGGGA E+EL+ LRDY
Sbjct: 361 CKHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRDY 420
Query: 167 SRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
+ ++G+EQL + A A A EV+PR L++NAG DA +L KLR KHA+G
Sbjct: 421 AEGVSGREQLAVRAFADALEVVPRTLAENAGLDAIEMLVKLRAKHAEG 468
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTT+ V++AGE+L++ + +++ VHP IVIK + A A + + E+A+ ++ D
Sbjct: 91 VGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQEVLKEIAMDVKADD-- 148
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
+ +L K A T+++ K + K +M+V+AV ++ D
Sbjct: 149 --KEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTAVVD 185
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 114 bits (284), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 78/113 (69%)
Query: 104 FSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKAL 163
GCK+ + TI++RGG E ++E ER++ DAI +V + + VVAGGGA E+E+++ L
Sbjct: 365 VEGCKDPKAVTILIRGGTEHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEVEVARQL 424
Query: 164 RDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQGRL 216
RD++ + G+EQL + A A A E+IPR L++N+G D ++L +LR KH G++
Sbjct: 425 RDFADGVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLRAKHEDGQV 477
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTT+ V+LAGE+L + + +++ +HP ++ + R MA++K +E+ +I +
Sbjct: 95 VGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYR----MAVEKAEEILEEIAEEIDP 150
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAV 94
+ L+K A TA++ K + + + + +++VV AV
Sbjct: 151 DDEETLKKIAKTAMTGKGVEKARDYLAELVVKAV 184
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 75/107 (70%)
Query: 107 CKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDY 166
CK + TI+VRG E + E ER++ DAI +V T+ + VVAGGGA E+E++K L+DY
Sbjct: 359 CKEPKAVTILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGGGAPEIEIAKRLKDY 418
Query: 167 SRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
+ SI+G+EQL + A A+A E++P+ L++NAG D+ ++L LR H +
Sbjct: 419 ADSISGREQLAVSAFAEALEIVPKTLAENAGLDSIDVLVDLRAAHEE 465
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTT+ V++AGE+LK+ + +E +HP I+ R+A A + +D++A I SD
Sbjct: 92 VGDGTTTAVIIAGELLKKAENLLEMEIHPTIIAMGYRQAAEKAQEILDDIA--IDASD-- 147
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
R L K A TA++ K + + ++++VDAV +++
Sbjct: 148 --RDTLMKVAMTAMTGKGTEKAREPLAELIVDAVKQVEE 184
>sp|O00782|TCPG_OXYGR T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3
SV=1
Length = 559
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 76/118 (64%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ F+ + C+N + C+I++RG ++ L E ER+LHDA+ + R + N +V GGGAIEM
Sbjct: 359 DEYFSFMTKCENPKACSILLRGASKDVLNEIERNLHDALGVARNVMVNPKLVPGGGAIEM 418
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQGR 215
EL+ L ++S+ I G +Q A+A A EVIPR L+ N G D ++ +LR KHA +
Sbjct: 419 ELACRLMEFSQKIEGMQQWPFKALAGALEVIPRTLAQNCGADVVRVMTELRAKHANDK 476
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV++LAGEIL V+ ++E +HP +++ A +A ++ + I +
Sbjct: 91 VGDGTTSVIILAGEILSAVESFLERDIHPTVIVGAYFQALEEIVRLTESYGEPIDIENEN 150
Query: 61 EYRGLLEKCAATALSSKL 78
+ + ++ C T SSK
Sbjct: 151 DLQKIVSSCIGTKFSSKW 168
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 73/110 (66%)
Query: 104 FSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKAL 163
GCKN + TI++RGG E ++E ER+L DAI +V+ + + ++AGGGA E+ELS L
Sbjct: 363 VEGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKL 422
Query: 164 RDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
+Y++ + GKEQL I A A+A +VIPR L++NAG D L K+ H +
Sbjct: 423 DEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE 472
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTT+ V++AGE+LK+ + +++ +HP I+IK A+ A + +D +A +++ D
Sbjct: 94 GDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYTLASQKAQEILDSIAKEVKPDDE-- 151
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAV 94
+L K A TA++ K +++ + +K+ V+AV
Sbjct: 152 --EVLLKAAMTAITGKAAEEEREYLAKLAVEAV 182
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 73/110 (66%)
Query: 104 FSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKAL 163
GCKN + TI++RGG E ++E ER+L DA+ +V+ + + ++AGGGA E+ELS L
Sbjct: 363 VEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKL 422
Query: 164 RDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
+Y++ + GKEQL I A A+A +VIPR L++NAG D L K+ H +
Sbjct: 423 DEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE 472
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTT+ V++AGE+LK+ + +++ +HP IVIK A A + +D +A +++ D
Sbjct: 94 GDGTTTAVVIAGELLKKAEELLDQNIHPSIVIKGYMLAAEKAQEILDSIAKEVKPDDE-- 151
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAV 94
+L K A TA++ K +++ + +K+ V+AV
Sbjct: 152 --EVLLKAAMTAITGKAAEEEREYLAKLAVEAV 182
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 78/117 (66%)
Query: 97 LDDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIE 156
D++ C++ + +II+RG + EE ER+L DAI +V T+ + VVAGGGA E
Sbjct: 349 FDEVLTFIEECRDPKAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGAPE 408
Query: 157 MELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
+E+++ LR+Y+ +I+G+EQL + A A A E++P+ L++NAG D+ ++L LR H +
Sbjct: 409 VEIARKLREYADTISGREQLAVSAFADALEIVPKTLAENAGLDSIDVLVDLRAAHEE 465
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTT+ V++AGE+LK+ + +E GVHP I+ R A A + ++E++ ++ SD
Sbjct: 92 VGDGTTTAVIIAGELLKEAEKLIEMGVHPTIIALGYRNAALKAQEILEEIS--MEASD-- 147
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
R L K A TA++ K + K +++VVDAVM +++
Sbjct: 148 --RDTLMKVAITAMTGKGSERAKEKLAELVVDAVMQVEE 184
>sp|P80315|TCPD_MOUSE T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3
Length = 539
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
Query: 100 LFNVFSGCKNA-RTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEME 158
LF + +GC + +T TI+VRG + +EE ERS+HDA+ ++R ++ A++AGGGA E+E
Sbjct: 373 LFKI-TGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIE 431
Query: 159 LSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
L+ L +YSR+++G E + A A A EVIP L++NAG + + + +LR +HAQG
Sbjct: 432 LALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQG 487
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTTSVV++AG +L +++G+HP I+ ++ +KA L+ + +++ +Q SD
Sbjct: 103 GDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQLSD--- 159
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
R L A T+L+SK++ Q S M V+AVM + D
Sbjct: 160 -RETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVID 196
>sp|Q2T9X2|TCPD_BOVIN T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=1 SV=3
Length = 542
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
Query: 104 FSGCKNA-RTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKA 162
+GC + +T TI+VRG + +EE ERS+HDA+ ++R ++ A++AGGGA E+EL+
Sbjct: 379 ITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALR 438
Query: 163 LRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
L +YSR+++G E I A A A EVIP L++NAG + + + +LR +HAQG
Sbjct: 439 LTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQG 490
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTTSVV++AG +L +++G+HP I+ ++ +K AL+K E+ + + +
Sbjct: 106 GDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQK----ALEKGIEILTDMSRPEELS 161
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
R L AAT+L+SK++ Q S M VDAVM + D
Sbjct: 162 DRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVID 199
>sp|Q7TPB1|TCPD_RAT T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1
SV=3
Length = 539
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
Query: 100 LFNVFSGCKNA-RTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEME 158
LF + +GC + +T TI+VRG + +EE ERS+HDA+ ++R ++ A++AGGGA E+E
Sbjct: 373 LFKI-TGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIE 431
Query: 159 LSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
L+ L +YSR+++G E + A A A EVIP L++NAG + + + +LR +HAQG
Sbjct: 432 LALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQG 487
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTTSVV++AG +L +++G+HP I+ ++ +KA L+ + +++ +Q SD
Sbjct: 103 GDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQLSD--- 159
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
R L A T+L+SK++ Q S M V+AVM + D
Sbjct: 160 -RETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVID 196
>sp|P50991|TCPD_HUMAN T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4
Length = 539
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
Query: 104 FSGCKNA-RTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKA 162
+GC + +T TI+VRG + +EE ERS+HDA+ ++R ++ A++AGGGA E+EL+
Sbjct: 376 ITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALR 435
Query: 163 LRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
L +YSR+++G E + A A A EVIP L++NAG + + + +LR +HAQG
Sbjct: 436 LTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQG 487
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTTSVV++AG +L +++G+HP I+ ++ +KA ++ + +++ ++ SD
Sbjct: 103 GDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSD--- 159
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
R L A T+L+SK++ Q S M V+AVM + D
Sbjct: 160 -RETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVID 196
>sp|Q5R637|TCPD_PONAB T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3
Length = 539
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
Query: 104 FSGCKNA-RTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKA 162
+GC + +T TI+VRG + +EE ERS+HDA+ ++R ++ A++AGGGA E+EL+
Sbjct: 376 ITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALR 435
Query: 163 LRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
L +YSR+++G E + A A A EVIP L++NAG + + + +LR +HAQG
Sbjct: 436 LTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQG 487
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTTSVV++AG +L +++G+HP I+ ++ +KA ++ + +++ ++ SD
Sbjct: 103 GDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSD--- 159
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
R L A T+L+SK+ Q S M V+AVM + D
Sbjct: 160 -RETLLNSATTSLNSKVASQYSSLLSPMSVNAVMKVID 196
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 107 bits (266), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 72/110 (65%)
Query: 104 FSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKAL 163
GCKN + TI++RGG E ++E ER+L DA+ +V+ + + +VA GGA E+ELS L
Sbjct: 363 VEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRL 422
Query: 164 RDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
+Y++ + GKEQL I A A+A +VIPR L++NAG D L K+ H +
Sbjct: 423 DEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE 472
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTT+ V++AGE+L++ + +++ +HP I+IK A A + +DE+A + D
Sbjct: 94 GDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAKDVDVED--- 150
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAV 94
R +L+K A T+++ K +++ + +++ V+AV
Sbjct: 151 -REILKKAAVTSITGKAAEEEREYLAEIAVEAV 182
>sp|P39076|TCPB_YEAST T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCT2 PE=1 SV=1
Length = 527
Score = 107 bits (266), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 80/125 (64%)
Query: 90 VVDAVMSLDDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVV 149
V++ +M + F FSGCK CTI++RG +Q L+E ERSLHDA+ ++ +T + V
Sbjct: 342 VIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTV 401
Query: 150 AGGGAIEMELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQ 209
GGG EM +SKA+ +++I GK+ L + A A+A +P L+DNAGFD++ +++KLR
Sbjct: 402 LGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRS 461
Query: 210 KHAQG 214
G
Sbjct: 462 SIYNG 466
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 12/131 (9%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEG-VHPRIVIKAVRKATSMALQKIDELAVKIQKSDS 59
VGDGTTSV +L+ E+L++ + +++ +HP+ +I+ R A++ AL + + AV D
Sbjct: 88 VGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVD-NSHDK 146
Query: 60 GEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDDLFNVFSGCKNARTCTII-VR 118
+R L A T LSSK++ Q K F+++ +A++ L G N II +
Sbjct: 147 TMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRL-------KGSTNLEHIQIIKIL 199
Query: 119 GG--AEQFLEE 127
GG ++ FL+E
Sbjct: 200 GGKLSDSFLDE 210
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 74/114 (64%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
+D G KN ++ TI++RGG E+ ++E ERSLHDA+ +V I + +VAGGGA+E
Sbjct: 364 EDKMVFIEGAKNPKSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGGAVEA 423
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKH 211
E++K L +Y+ + GK QL + A A+A E +P+ L+ NAG D +L KLR H
Sbjct: 424 EVAKVLYEYASKLPGKTQLAVEAFARAVEALPQALAHNAGHDPIEVLVKLRSAH 477
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGT + V+ AGE+LK+ + ++ +HP I+++ ++A A + I+ +A + D +
Sbjct: 101 GDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKASEVIESIAEPVSYDDVEK 160
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL 97
L+ A T+L+SK + + + +F+++ V+AV ++
Sbjct: 161 ----LKLIAKTSLNSKAVAEARDYFAELAVEAVRTV 192
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 75/118 (63%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ +GCKN + TI+VRGG E +EE R + DA+ V + + VV G GA E+
Sbjct: 357 DEKMVFVTGCKNPKAVTILVRGGTEHVVEEIARGIEDAVRAVACAVEDGKVVVGAGAPEI 416
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQGR 215
E+S LR+++ S+ G+EQL + A A A E+IPR L++NAG D ++L +L+ H +G+
Sbjct: 417 EVSLKLREWAPSLGGREQLAVEAFATALEIIPRTLAENAGLDPIDVLVELKAAHEKGQ 474
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTT+ V+LAGE+LK+ + +++ +HP I+ R A AL+ ++E+A+ I K D
Sbjct: 93 VGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEKALEILNEIAIPISKDDD- 151
Query: 61 EYRGLLEKCAATALSSK 77
+L+K A TA++ K
Sbjct: 152 ---EILKKIATTAMTGK 165
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%)
Query: 104 FSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKAL 163
GCKN + TI++RGG E ++E ER+L DA+ +V+ + + +VA GGA E+EL+ L
Sbjct: 363 VEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRL 422
Query: 164 RDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
+Y++ + GKEQL I A A+A +VIPR L++NAG D L K+ H +
Sbjct: 423 DEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE 472
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTT+ V++AGE+L++ + +++ +HP I+IK A A + +DE+A + D
Sbjct: 94 GDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDEIAKDVDVED--- 150
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAV 94
R +L+K A T+++ K +++ + +++ V+AV
Sbjct: 151 -REILKKAAVTSITGKAAEEEREYLAEIAVEAV 182
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 71/105 (67%)
Query: 107 CKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDY 166
CK+ + TI+ RG E +EE R++ DAI +V+ + +VAGGGA E+EL+K LR +
Sbjct: 363 CKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKF 422
Query: 167 SRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKH 211
+ S+AG+EQL + A A A EVIPR L++N+G D ++L KLR H
Sbjct: 423 AESVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAH 467
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTT+ V++AGE+L++ + +++ +HP ++I A + A++++ +A +++ D+
Sbjct: 92 VGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNKAVEELKSIAKEVKPEDT- 150
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
+L+K A T+++ K + + +++VV+AV ++ D
Sbjct: 151 ---EMLKKIAMTSITGKGAEKAREQLAEIVVEAVRAVVD 186
>sp|P54408|TCPG_TETPY T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3
SV=1
Length = 559
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 92/187 (49%), Gaps = 30/187 (16%)
Query: 32 VIKAVRKATSMALQKIDELAV-----KIQKSDSGEYRGLLEKCAATALSSKLIHQQKGFF 86
VI+ VRK + + ++ + +IQ+SD G+ GL E KLI
Sbjct: 314 VIRRVRKTDNNRISRVSGATIVNRPEEIQESDVGKKCGLFE--------VKLIG------ 359
Query: 87 SKMVVDAVMSLDDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNH 146
D+ F + C+N C+II+RG ++ L E ER+LHD + + + N
Sbjct: 360 -----------DEYFTFMTECENPEACSIILRGASKDVLNEMERNLHDCLAVAKNIFVNP 408
Query: 147 AVVAGGGAIEMELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNK 206
+V GGGAIEME+S L S SI G QL AVA A E IP+ L+ N G D + +
Sbjct: 409 KLVPGGGAIEMEVSSHLEKISSSIEGLHQLPFRAVAYALEAIPKTLAQNCGVDVVRNITE 468
Query: 207 LRQKHAQ 213
LR KH Q
Sbjct: 469 LRAKHNQ 475
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV+++AGE++ KP++E +HP I++ A +A +++KI+ELAV I ++
Sbjct: 93 VGDGTTSVIIMAGEMMSAAKPFIERDIHPSIIVTAYYRALEESIKKIEELAVPIDVNNDD 152
Query: 61 EYRGLLEKCAATALSSKL 78
+ L C T +S+
Sbjct: 153 QVNKALSSCIGTKFTSRW 170
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 77/117 (65%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
+D G KN ++ TI++RG + L+E ER++ DA+ +R +R +V GGGA+E+
Sbjct: 359 EDKMVFIEGAKNPKSVTILLRGANDMLLDEAERNIKDALHGLRNILREPKIVGGGGAVEV 418
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
EL+ L++++R++ GK+QL I A A+A E IP L+++AG DA L KLR H+QG
Sbjct: 419 ELALKLKEFARTVGGKQQLAIEAYAEALETIPTVLAESAGMDALEALLKLRSLHSQG 475
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSVV+LAG +L++ + ++E +HP I+I+ KA AL+ +DE AV ++ D
Sbjct: 92 VGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYTKAMEEALRLVDEAAVPVEVEDD- 150
Query: 61 EYRGLLEKCAATALSSKLI--HQQKGFFSKMVVDAVMSL 97
+L + A T L+SK + ++ MV+DA+ ++
Sbjct: 151 ---SVLRRIAETTLASKFVGTGPERDKIISMVIDAIRTV 186
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 72/110 (65%)
Query: 104 FSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKAL 163
GCKN + TI++RGG E ++E ER+L DA+ +V+ + + +VA GGA E+EL+ ++
Sbjct: 363 VEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAISV 422
Query: 164 RDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
+Y++ + GKEQL I A A+A +VIPR L+ NAG D L K+ H +
Sbjct: 423 DEYAKEVGGKEQLAIEAFAEALKVIPRTLAGNAGLDPIETLVKVIAAHKE 472
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTT+ V++AGE+L++ + +++ +HP I+IK A A + +D +A + D
Sbjct: 94 GDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDSIARDVDVED--- 150
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAV 94
R +L+K A TA++ K +++ + +++ V+AV
Sbjct: 151 -REILKKAAMTAITGKAAEEEREYLAEIAVEAV 182
>sp|Q9HN70|THSA_HALSA Thermosome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=thsA PE=3 SV=2
Length = 562
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 73/108 (67%)
Query: 107 CKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDY 166
+ A++ T+I+RGG E ++E ER++ D++ +VR T+ + V+ GGGA E EL+ LRD+
Sbjct: 363 VEEAKSVTLILRGGTEHVVDEVERAIEDSLGVVRVTLEDGQVMPGGGAPETELAMQLRDF 422
Query: 167 SRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
+ S+ G+EQL + A A A EVIPR L++NAG D + L LR +H G
Sbjct: 423 ADSVGGREQLAVEAFADALEVIPRTLAENAGHDPIDSLVDLRSQHDGG 470
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTT+ V+++GE+L + + +E+ +H + + R+A A + +D+ A+ + D+
Sbjct: 94 VGDGTTTSVVVSGELLSEAETLLEQDIHATTLAQGYRQAAEKAKELLDDAAIDVSADDT- 152
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL 97
LEK AATA++ K KG S +VV AV S+
Sbjct: 153 ---ETLEKIAATAMTGKGAENAKGVLSDLVVRAVQSV 186
>sp|P53451|TCPD_TAKRU T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2
SV=1
Length = 536
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Query: 104 FSGCKNA-RTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKA 162
+GC + +T +I+VRG + +EE ERS+HDA+ ++R ++ A++AGGGA E+EL+
Sbjct: 373 ITGCASPGKTVSIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELAVR 432
Query: 163 LRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
L +YSR++ G E + A + A EVIP L++NAG + + + +LR +HAQG
Sbjct: 433 LAEYSRTLGGMEAYCVRAYSDALEVIPSTLAENAGLNPISTVTELRNRHAQG 484
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTTSVV++AG +L ++ G+HP I+ ++ +KA ++ + ++ +Q D
Sbjct: 100 GDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLTAMSQPVQLGD--- 156
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
R L A T+L SK++ Q + M VDAVM + D
Sbjct: 157 -RETLLNSATTSLCSKVVSQYSSLLAPMSVDAVMRVID 193
>sp|Q54TH8|TCPG_DICDI T-complex protein 1 subunit gamma OS=Dictyostelium discoideum
GN=cct3 PE=1 SV=1
Length = 530
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ F CK + CTI++RG ++ L E ER+L DA+ + R + + +V GGGAIEM
Sbjct: 356 DEYFTFLEDCKEPKACTILLRGASKDILNEVERNLTDALNVARNIVLDPRLVPGGGAIEM 415
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHA 212
LS+AL + S+SI G QL A+A++ E IP+ L+ N G + +L +LR KHA
Sbjct: 416 ALSQALSEKSKSIEGLHQLPYKALAQSLECIPKILAQNCGANTVKLLTELRAKHA 470
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSVV+LA E+L + ++E+ +HP +IKA R A +L +D+ +V I +
Sbjct: 89 VGDGTTSVVILAAEVLASSELFIEKKIHPHYIIKAFRMALDDSLSIVDQYSVAIDLKNRP 148
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL 97
E +++ C T K I + + +DAVM++
Sbjct: 149 EVLKVVQSCIGT----KFIGKWGSLMCNLALDAVMTV 181
>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct1 PE=1 SV=1
Length = 560
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 75/110 (68%)
Query: 107 CKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDY 166
++A++ T+I+RGG E ++E ER++ D++ +VR T+ + V+ GGGA E ELS LR++
Sbjct: 364 VEDAKSVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPETELSLQLREF 423
Query: 167 SRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQGRL 216
+ S+ G+EQL + A A+A ++IPR L++NAG D + L LR +H G
Sbjct: 424 ADSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRHDGGEF 473
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTT+ V+ AGE+L Q + ++ VH + + R+A A + +++ A+++ + D
Sbjct: 95 VGDGTTTAVINAGELLDQAEDLLDSDVHATTIAQGYRQAAEKAKEVLEDNAIEVTEDD-- 152
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
R L K AATA++ K K S++VVDAV+++ D
Sbjct: 153 --RETLTKIAATAMTGKGAESAKDLLSELVVDAVLAVKD 189
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 71/110 (64%)
Query: 104 FSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKAL 163
GCKN + TI++RGG E ++E ER+L DA+ +V+ + + ++ GGA E+EL+ L
Sbjct: 363 VEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAIKL 422
Query: 164 RDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
+Y++ + GKEQL I A A+A +VIPR L++NAG D L K+ H +
Sbjct: 423 DEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAHKE 472
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 58/93 (62%), Gaps = 4/93 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTT+ V++AGE+LK+ + +++ +HP I+IK ++A +K E+ I K S +
Sbjct: 94 GDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGY----ALAAEKAQEILEGIAKEVSPD 149
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAV 94
L+K A T+++ K +++ + +++ V+AV
Sbjct: 150 DVETLKKAAVTSITGKAAEEEREYLAEIAVEAV 182
>sp|P80318|TCPG_MOUSE T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1
Length = 545
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ F + CK+ + CTI++RG +++ L E ER+L DA+ + R + + +V GGGA EM
Sbjct: 357 DEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEM 416
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
++ AL + S+++ G EQ AVA+A EVIPR L N G +L LR KH Q
Sbjct: 417 AVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ 472
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV++LAGE+L + ++E+ +HP +VI A R MAL + KI
Sbjct: 91 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYR----MALDDMISTLKKISTPVDV 146
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL 97
R ++ +++++K+I + + +DAV ++
Sbjct: 147 NNREMMLSIINSSITTKVISRWSSLACNIALDAVKTV 183
>sp|P49368|TCPG_HUMAN T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4
Length = 545
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ F + CK+ + CTI++RG +++ L E ER+L DA+ + R + + +V GGGA EM
Sbjct: 357 DEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEM 416
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
++ AL + S+++ G EQ AVA+A EVIPR L N G +L LR KH Q
Sbjct: 417 AVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ 472
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV++LAGE+L + ++E+ +HP +VI A RKA + + ++++ + SDS
Sbjct: 91 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDISDSD 150
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAV 94
++ +++++K I + + +DAV
Sbjct: 151 MMLNIIN----SSITTKAISRWSSLACNIALDAV 180
>sp|Q5NVF9|TCPG_PONAB T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1
Length = 545
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ F + CK+ + CTI++RG +++ L E ER+L DA+ + R + + +V GGGA EM
Sbjct: 357 DEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEM 416
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
++ AL + S+++ G EQ AVA+A EVIPR L N G +L LR KH Q
Sbjct: 417 AVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ 472
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV++LAGE+L + ++E+ +HP +VI A RKA + + ++++ + +DS
Sbjct: 91 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDINDSD 150
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAV 94
++ +++++K I + + +DAV
Sbjct: 151 MMLNIIN----SSITTKAISRWSSLACNIALDAV 180
>sp|Q6P502|TCPG_RAT T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1
SV=1
Length = 545
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ F + CK+ + CTI++RG +++ L E ER+L DA+ + R + + +V GGGA EM
Sbjct: 357 DEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEM 416
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
++ AL + S+++ G EQ AVA+A EVIPR L N G +L LR KH Q
Sbjct: 417 AVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ 472
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV++LAGE+L + ++E+ +HP +VI A R MAL + KI
Sbjct: 91 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYR----MALDDMVSTLKKISTPVDV 146
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL 97
R ++ +++++K+I + + +DAV ++
Sbjct: 147 NNRDMMLNIINSSITTKVISRWSSLACNIALDAVKTV 183
>sp|P39077|TCPG_YEAST T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCT3 PE=1 SV=2
Length = 534
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 72/119 (60%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ F+ CK + CTI++RGG++ L E +R+L DA+ + R + + ++ GGGA EM
Sbjct: 362 DEYFSFLDNCKEPKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEM 421
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQGRL 216
+S L + ++ + G +Q AVA A E IPR L NAG D +L++LR KHAQG
Sbjct: 422 AVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNF 480
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 65/111 (58%), Gaps = 6/111 (5%)
Query: 1 VGDGTTSVVLLAGEILKQVKPY-VEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDS 59
VGDGTT+V++LAGEIL Q PY +E+ +HP I+I+A++KA + AL+ I +++ + +
Sbjct: 89 VGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVEND 148
Query: 60 GEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL-DDLFNVFSGCKN 109
+ L++ ++ +K + ++ +DAV ++ DL G N
Sbjct: 149 AAMKKLIQ----ASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPN 195
>sp|Q3T0K2|TCPG_BOVIN T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=1 SV=1
Length = 545
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ F + CK+ + CTI++RG +++ L E ER+L DA+ + R + + +V GGGA EM
Sbjct: 357 DEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEM 416
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
++ AL + S+++ G EQ AVA+A EVIPR L N G +L LR KH Q
Sbjct: 417 AVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ 472
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV++LAGE+L + ++E+ +HP +VI A RKA + + ++++ + S+
Sbjct: 91 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSN-- 148
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL 97
R + +++++K+I + + +DAV ++
Sbjct: 149 --RDTMLNIINSSITTKVISRWSSLACNIALDAVKTV 183
>sp|Q4R963|TCPG_MACFA T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3
PE=2 SV=1
Length = 545
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 71/116 (61%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ F + CK+ + CTI++RG +++ L E ER+L DA+ + R + + +V GGGA EM
Sbjct: 357 DEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEM 416
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
++ AL + S+++ G EQ AVA+A EVIPR L N G +L LR KH Q
Sbjct: 417 AVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ 472
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VG GTTSV++LAGE+L + ++E+ +HP +VI A RKA + + ++++ + +DS
Sbjct: 91 VGGGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDINDSD 150
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL 97
++ +++++K I + + +DAV ++
Sbjct: 151 MMLNIIN----SSITTKAISRWSSLACNIALDAVKTV 183
>sp|P50999|TCPD_SCHPO T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct4 PE=2 SV=2
Length = 527
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
Query: 104 FSGCKNA-RTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKA 162
FSG KNA +T +I+ RG LEE ERSLHDA+ ++R ++ A++AGGG+ E+E ++
Sbjct: 364 FSGVKNAGKTVSILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQR 423
Query: 163 LRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
L +++R + G+E + I A ++A E+IP L++NAG +A ++ +LR +HA G
Sbjct: 424 LLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHANG 475
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 2 GDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGE 61
GDGTTSVV+LAG +L + +++G+HP ++ ++ ++A + + E A+ I+ SD
Sbjct: 90 GDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIELSD--- 146
Query: 62 YRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 99
R L + A T+L+SK++ Q + + VDAV+ + D
Sbjct: 147 -RESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVID 183
>sp|P50143|TCPG_XENLA T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2
SV=2
Length = 547
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
D+ F + CK+ + CTI++RG +++ L E ER+L DA+ + R + + +V GGGA EM
Sbjct: 356 DEYFTFITDCKDPKACTIVLRGASKEILAEVERNLQDAMQVCRNVVIDPYLVPGGGASEM 415
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQ 213
++ L + S+++ G EQ AVA+A EVIPR L N G IL LR KH Q
Sbjct: 416 SVAHILTEKSKTMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRILTSLRAKHTQ 471
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSG 60
VGDGTTSV++LAGE+L + ++E+ +HP ++I A RKA + + E++ + +D
Sbjct: 90 VGDGTTSVIILAGEMLSVAEQFLEQQMHPTVIISAYRKALDDMVNTLKEISTPVDTND-- 147
Query: 61 EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLD 98
R L+ K +A+++K I + +DAV +++
Sbjct: 148 --RELMLKIINSAINTKAIKLWADMACGIALDAVKTVE 183
>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
Length = 560
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 74/117 (63%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
+D G KN + I++RG + L+E ERS++DA+ +R + ++ GGGAIE+
Sbjct: 362 NDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIEL 421
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
EL+ LR+Y+RS+ GKEQL I A A A E IP L++ AG +A + L LR +HA+G
Sbjct: 422 ELAMKLREYARSVGGKEQLAIEAFADALEEIPTILAETAGLEAISALMDLRARHAKG 478
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSD-- 58
VGDGTTS V+LAG +L++ + +++ +HP I+I+ +KA + AL+ + +L +I D
Sbjct: 89 VGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELLPQLGTRIDIRDLN 148
Query: 59 SGEYRGLLEKCAATALSSKLIHQ--QKGFFSKMVVDAVMSL 97
S R L K A T L+SK I + + MV+DA++++
Sbjct: 149 SSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNV 189
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 72/117 (61%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
+D G KN R I++RG + L+E ERSL+DA+ +R + +VAGGGA+E
Sbjct: 363 NDKMVFIEGAKNPRAVNILLRGSNDMALDEAERSLNDALHSLRNVLMKPMIVAGGGAVES 422
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKHAQG 214
EL+ LR+Y+RS+ GKEQL I A+A E IP L++ AG + L LR +HA+G
Sbjct: 423 ELALRLREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQALMDLRARHAKG 479
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Query: 1 VGDGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSD-- 58
VGDGTTS V+LAG +L + + +E+ VHP I+I +KA + AL+ ID+L++KI +D
Sbjct: 89 VGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALEIIDQLSLKIDVNDLS 148
Query: 59 SGEYRGLLEKCAATALSSKLIHQQKGFFSK---MVVDAV 94
S + L+K +T +SSK I K +V+DA+
Sbjct: 149 SPTAKAQLKKIVSTTMSSKFIAGGAEEIDKIIDLVIDAI 187
>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
Length = 552
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 72/114 (63%)
Query: 98 DDLFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 157
+D G KN + +I++RGG E+ ++ETER+L DA+ V IR+ VAGGGA+E+
Sbjct: 364 EDKMVFVEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEL 423
Query: 158 ELSKALRDYSRSIAGKEQLLIGAVAKAFEVIPRQLSDNAGFDATNILNKLRQKH 211
E++K LR Y+ I GKEQL I A A A E + L +N G+D ++L KLR H
Sbjct: 424 EIAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAH 477
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 3 DGTTSVVLLAGEILKQVKPYVEEGVHPRIVIKAVRKATSMALQKIDELAVKIQKSDSGEY 62
DGT + V+LAGE++K+ + + + +HP I++ +KA AL+ I+E+A K+ +D
Sbjct: 102 DGTKTAVILAGELVKKAEELLYKEIHPTIIVSGFKKAEEQALKTIEEIAQKVSVND---- 157
Query: 63 RGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDDL 100
+L+K A T+L+SK + + + + +V AV + +L
Sbjct: 158 MDILKKVAMTSLNSKAVAGAREYLADIVAKAVTQVAEL 195
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,820,740
Number of Sequences: 539616
Number of extensions: 2486784
Number of successful extensions: 11329
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 314
Number of HSP's that attempted gapping in prelim test: 9002
Number of HSP's gapped (non-prelim): 2375
length of query: 219
length of database: 191,569,459
effective HSP length: 113
effective length of query: 106
effective length of database: 130,592,851
effective search space: 13842842206
effective search space used: 13842842206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)