BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17074
(632 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZJK8|TCPH_CHICK T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1
Length = 553
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/352 (66%), Positives = 266/352 (75%), Gaps = 53/352 (15%)
Query: 328 ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATI 387
++LLKEGT+ SQG PQL+SNINACQ + +AVRTTLGPRGMDKLIVD GK+TISNDGATI
Sbjct: 6 VILLKEGTDTSQGIPQLVSNINACQVIAEAVRTTLGPRGMDKLIVDDRGKATISNDGATI 65
Query: 388 MKLLDIVHPAAKTLVDIAKSQDAEI----------------------------------- 412
+KLLD+VHPAAKTLVDIAKSQDAE+
Sbjct: 66 LKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAF 125
Query: 413 ------------------QKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMS 454
+K D E R LLEKCAATALSSKLI Q K FFSKMVVDAVM
Sbjct: 126 RTATQLAVNKIKDIAVSVKKEDKDEQRSLLEKCAATALSSKLISQSKEFFSKMVVDAVMM 185
Query: 455 LDDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELE 514
LDDLL L MIGIKKV GGALEDS LV GV+FKKTF+YAGFEMQPK Y++PKIALLN+ELE
Sbjct: 186 LDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYQSPKIALLNVELE 245
Query: 515 LKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFAD 574
LKAE+DNAE+R+++VE+YQ +VDAEW ILY+KLDKIH SGA+VVLSKLPIGDVATQYFAD
Sbjct: 246 LKAEKDNAEVRVNTVEDYQAIVDAEWNILYDKLDKIHKSGAKVVLSKLPIGDVATQYFAD 305
Query: 575 RDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
RDMFCAGRVPEEDLKRTM ACGG++ T+ + L+D VLG C +F+E QIG +R
Sbjct: 306 RDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSDDVLGRCELFEEIQIGGDR 357
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 150/178 (84%)
Query: 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 93
K +K E ++YQ +VDAEW ILY+KLDKIH SGA+VVLSKLPIGDVATQYFADR
Sbjct: 247 KAEKDNAEVRVNTVEDYQAIVDAEWNILYDKLDKIHKSGAKVVLSKLPIGDVATQYFADR 306
Query: 94 DMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKN 153
DMFCAGRVPEEDLKRTM ACGG++ T+ + L+D VLG C +F+E QIG +R+N F+GC
Sbjct: 307 DMFCAGRVPEEDLKRTMMACGGSIQTSVNALSDDVLGRCELFEEIQIGGDRYNFFTGCPK 366
Query: 154 ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
A+TCTII+RGGAEQF+EETERSLHDAIMIVRR I+N +VVAGGGAIEMELSK LRDYS
Sbjct: 367 AKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYS 424
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 79/83 (95%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
GFEMQPK Y++PKIALLN+ELELKAE+DNAE+R+++VE+YQ +VDAEW ILY+KLDKIH
Sbjct: 224 GFEMQPKKYQSPKIALLNVELELKAEKDNAEVRVNTVEDYQAIVDAEWNILYDKLDKIHK 283
Query: 294 SGAQVVLSKLPIGDVATQYFADR 316
SGA+VVLSKLPIGDVATQYFADR
Sbjct: 284 SGAKVVLSKLPIGDVATQYFADR 306
>sp|Q99832|TCPH_HUMAN T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2
Length = 543
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/352 (66%), Positives = 265/352 (75%), Gaps = 53/352 (15%)
Query: 328 ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATI 387
++LLKEGT++SQG PQL+SNI+ACQ + +AVRTTLGPRGMDKLIVD GK+TISNDGATI
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATI 65
Query: 388 MKLLDIVHPAAKTLVDIAKSQDAEI----------------------------------- 412
+KLLD+VHPAAKTLVDIAKSQDAE+
Sbjct: 66 LKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAF 125
Query: 413 ------------------QKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMS 454
+K+D E R LLEKCA TALSSKLI QQK FF+KMVVDAVM
Sbjct: 126 RTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMM 185
Query: 455 LDDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELE 514
LDDLL L MIGIKKV GGALEDS LV GV+FKKTF+YAGFEMQPK Y NPKIALLN+ELE
Sbjct: 186 LDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELE 245
Query: 515 LKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFAD 574
LKAE+DNAEIR+ +VE+YQ +VDAEW ILY+KL+KIH SGA+VVLSKLPIGDVATQYFAD
Sbjct: 246 LKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFAD 305
Query: 575 RDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
RDMFCAGRVPEEDLKRTM ACGG++ T+ + L+ VLG C VF+E QIG ER
Sbjct: 306 RDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGER 357
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 148/178 (83%)
Query: 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 93
K +K E ++YQ +VDAEW ILY+KL+KIH SGA+VVLSKLPIGDVATQYFADR
Sbjct: 247 KAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR 306
Query: 94 DMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKN 153
DMFCAGRVPEEDLKRTM ACGG++ T+ + L+ VLG C VF+E QIG ER+N F+GC
Sbjct: 307 DMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPK 366
Query: 154 ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
A+TCT I+RGGAEQF+EETERSLHDAIMIVRR I+N +VVAGGGAIEMELSK LRDYS
Sbjct: 367 AKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYS 424
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 77/83 (92%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
GFEMQPK Y NPKIALLN+ELELKAE+DNAEIR+ +VE+YQ +VDAEW ILY+KL+KIH
Sbjct: 224 GFEMQPKKYHNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHH 283
Query: 294 SGAQVVLSKLPIGDVATQYFADR 316
SGA+VVLSKLPIGDVATQYFADR
Sbjct: 284 SGAKVVLSKLPIGDVATQYFADR 306
>sp|Q5R5C8|TCPH_PONAB T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1
Length = 543
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/352 (65%), Positives = 265/352 (75%), Gaps = 53/352 (15%)
Query: 328 ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATI 387
++LLKEGT++SQG PQL+SNI+ACQ + +AVRTTLGPRGMDKLIVD GK+TISNDGATI
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATI 65
Query: 388 MKLLDIVHPAAKTLVDIAKSQDAEI----------------------------------- 412
+KLLD+VHPAAKTLVDIAKSQDAE+
Sbjct: 66 LKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAF 125
Query: 413 ------------------QKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMS 454
+K+D E R LLEKCA TALSSKLI QQK FF+KMVVDAVM
Sbjct: 126 RTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMM 185
Query: 455 LDDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELE 514
LDDLL L MIGIKKV GGALEDS LV GV+FKKTF+YAGFEMQPK Y NPK+ALLN+ELE
Sbjct: 186 LDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKVALLNVELE 245
Query: 515 LKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFAD 574
LKAE+DNAEIR+ +VE+YQ +VDAEW ILY+KL+KIH SGA+VVLSKLPIGDVATQYFAD
Sbjct: 246 LKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFAD 305
Query: 575 RDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
RDMFCAGRVPEEDLKRTM ACGG++ T+ + L+ VLG C VF+E QIG ER
Sbjct: 306 RDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGER 357
Score = 276 bits (706), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 148/178 (83%)
Query: 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 93
K +K E ++YQ +VDAEW ILY+KL+KIH SGA+VVLSKLPIGDVATQYFADR
Sbjct: 247 KAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR 306
Query: 94 DMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKN 153
DMFCAGRVPEEDLKRTM ACGG++ T+ + L+ VLG C VF+E QIG ER+N F+GC
Sbjct: 307 DMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPK 366
Query: 154 ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
A+TCT I+RGGAEQF+EETERSLHDAIMIVRR I+N +VVAGGGAIEMELSK LRDYS
Sbjct: 367 AKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYS 424
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 77/83 (92%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
GFEMQPK Y NPK+ALLN+ELELKAE+DNAEIR+ +VE+YQ +VDAEW ILY+KL+KIH
Sbjct: 224 GFEMQPKKYHNPKVALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHH 283
Query: 294 SGAQVVLSKLPIGDVATQYFADR 316
SGA+VVLSKLPIGDVATQYFADR
Sbjct: 284 SGAKVVLSKLPIGDVATQYFADR 306
>sp|Q2NKZ1|TCPH_BOVIN T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=1 SV=1
Length = 543
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/352 (65%), Positives = 263/352 (74%), Gaps = 53/352 (15%)
Query: 328 ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATI 387
++LLKEGT++SQG PQL+SNI+ACQ + +AVRTTLGPRGMDKLIVD GK+TISNDGATI
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATI 65
Query: 388 MKLLDIVHPAAKTLVDIAKSQDAEI----------------------------------- 412
+KLLD+VHPAAKTLVDIAKSQDAE+
Sbjct: 66 LKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAF 125
Query: 413 ------------------QKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMS 454
+K D E R LLEKCA TALSSKLI QQK FF+KMVVDAVM
Sbjct: 126 RTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMM 185
Query: 455 LDDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELE 514
LDDLL L MIGIKKV GGALE+S LV GV+FKKTF+YAGFEMQPK Y NP IALLN+ELE
Sbjct: 186 LDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELE 245
Query: 515 LKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFAD 574
LKAE+DNAEIR+ +VE+YQ +VDAEW ILY+KL+KIH SGA+VVLSKLPIGDVATQYFAD
Sbjct: 246 LKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFAD 305
Query: 575 RDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
RDMFCAGRVPEEDLKRTM ACGG++ T+ + L+ VLG C VF+E QIG ER
Sbjct: 306 RDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGER 357
Score = 279 bits (713), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 149/178 (83%)
Query: 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 93
K +K E ++YQ +VDAEW ILY+KL+KIH SGA+VVLSKLPIGDVATQYFADR
Sbjct: 247 KAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR 306
Query: 94 DMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKN 153
DMFCAGRVPEEDLKRTM ACGG++ T+ + L+ VLG C VF+E QIG ER+N F+GC
Sbjct: 307 DMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPK 366
Query: 154 ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
A+TCTII+RGGAEQF+EETERSLHDAIMIVRR I+N +VVAGGGAIEMELSK LRDYS
Sbjct: 367 AKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYS 424
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 76/83 (91%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
GFEMQPK Y NP IALLN+ELELKAE+DNAEIR+ +VE+YQ +VDAEW ILY+KL+KIH
Sbjct: 224 GFEMQPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHH 283
Query: 294 SGAQVVLSKLPIGDVATQYFADR 316
SGA+VVLSKLPIGDVATQYFADR
Sbjct: 284 SGAKVVLSKLPIGDVATQYFADR 306
>sp|P80313|TCPH_MOUSE T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1
Length = 544
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/352 (65%), Positives = 264/352 (75%), Gaps = 53/352 (15%)
Query: 328 ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATI 387
++LLKEGT++SQG PQL+SNI+ACQ + +AVRTTLGPRGMDKLIVD GK+TISNDGATI
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATI 65
Query: 388 MKLLDIVHPAAKTLVDIAKSQDAEI----------------------------------- 412
+KLLD+VHPAAKTLVDIAKSQDAE+
Sbjct: 66 LKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAF 125
Query: 413 ------------------QKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMS 454
+K D E R +LEKCA TALSSKLI QQK FF+KMVVDAVM
Sbjct: 126 RTATQLAVNKIKEIAVTVKKQDKVEQRKMLEKCAMTALSSKLISQQKVFFAKMVVDAVMM 185
Query: 455 LDDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELE 514
LD+LL L MIGIKKV GGALE+S LV GV+FKKTF+YAGFEMQPK YKNPKIALLN+ELE
Sbjct: 186 LDELLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYKNPKIALLNVELE 245
Query: 515 LKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFAD 574
LKAE+DNAEIR+ +VE+YQ +VDAEW ILY+KL+KIH SGA+V+LSKLPIGDVATQYFAD
Sbjct: 246 LKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHQSGAKVILSKLPIGDVATQYFAD 305
Query: 575 RDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
RDMFCAGRVPEEDLKRTM ACGG++ T+ + L VLG C VF+E QIG ER
Sbjct: 306 RDMFCAGRVPEEDLKRTMMACGGSIQTSVNALVPDVLGHCQVFEETQIGGER 357
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 148/178 (83%)
Query: 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 93
K +K E ++YQ +VDAEW ILY+KL+KIH SGA+V+LSKLPIGDVATQYFADR
Sbjct: 247 KAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHQSGAKVILSKLPIGDVATQYFADR 306
Query: 94 DMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKN 153
DMFCAGRVPEEDLKRTM ACGG++ T+ + L VLG C VF+E QIG ER+N F+GC
Sbjct: 307 DMFCAGRVPEEDLKRTMMACGGSIQTSVNALVPDVLGHCQVFEETQIGGERYNFFTGCPK 366
Query: 154 ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
A+TCTII+RGGAEQF+EETERSLHDAIMIVRR I+N +VVAGGGAIEMELSK LRDYS
Sbjct: 367 AKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYS 424
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/83 (81%), Positives = 78/83 (93%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
GFEMQPK YKNPKIALLN+ELELKAE+DNAEIR+ +VE+YQ +VDAEW ILY+KL+KIH
Sbjct: 224 GFEMQPKKYKNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHQ 283
Query: 294 SGAQVVLSKLPIGDVATQYFADR 316
SGA+V+LSKLPIGDVATQYFADR
Sbjct: 284 SGAKVILSKLPIGDVATQYFADR 306
>sp|P87153|TCPH_SCHPO Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cct7 PE=1 SV=1
Length = 558
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/360 (55%), Positives = 251/360 (69%), Gaps = 56/360 (15%)
Query: 326 PQI--LLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISND 383
PQI ++LKEGT++SQG+ QL+SNINAC AV D +RTTLGP G DKL+VD G+ ISND
Sbjct: 6 PQIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISND 65
Query: 384 GATIMKLLDIVHPAAKTLVDIAKSQDAEIQKSDSG----------EYRGLLE-------- 425
GATIMKLLDIVHPAAKTLVDIA++QDAE+ + E R +E
Sbjct: 66 GATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLI 125
Query: 426 -----------------------------------KCAATALSSKLIHQQKGFFSKMVVD 450
KCA+TA++SKLI FF+KMVVD
Sbjct: 126 IRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVD 185
Query: 451 AVMSLD-DLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALL 509
AV++LD + L NMIGIKKV GGA+EDSLLV GV+FKKTF+YAGFE QPK +KNPKI L
Sbjct: 186 AVLTLDQEDLNENMIGIKKVPGGAMEDSLLVKGVAFKKTFSYAGFEQQPKFFKNPKILCL 245
Query: 510 NIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVAT 569
++ELELKAE+DNAE+R+D V+EYQ +VDAEW+I++ KL+ I A+GA+VVLSKLPIGD+AT
Sbjct: 246 DVELELKAEKDNAEVRVDKVQEYQNIVDAEWRIIFSKLEAIVATGAKVVLSKLPIGDLAT 305
Query: 570 QYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTL 629
QYFADRD+FCAGRV +DL R ++A GG++ +T ++ + LGTC F+ERQIG +R L
Sbjct: 306 QYFADRDIFCAGRVAADDLNRVVQAVGGSIQSTCSNIEEKHLGTCDTFEERQIGGDRFNL 365
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 141/178 (79%)
Query: 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 93
K +K E ++ EYQ +VDAEW+I++ KL+ I A+GA+VVLSKLPIGD+ATQYFADR
Sbjct: 252 KAEKDNAEVRVDKVQEYQNIVDAEWRIIFSKLEAIVATGAKVVLSKLPIGDLATQYFADR 311
Query: 94 DMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKN 153
D+FCAGRV +DL R ++A GG++ +T ++ + LGTC F+ERQIG +RFN+F GC
Sbjct: 312 DIFCAGRVAADDLNRVVQAVGGSIQSTCSNIEEKHLGTCDTFEERQIGGDRFNLFEGCPK 371
Query: 154 ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
A+TCT+I+RGGA+QF+ E ERSLHDAIMIV+ ++N+ VVAGGGA EMELSK LRDYS
Sbjct: 372 AKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSKYLRDYS 429
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/83 (71%), Positives = 74/83 (89%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
GFE QPK +KNPKI L++ELELKAE+DNAE+R+D V+EYQ +VDAEW+I++ KL+ I A
Sbjct: 229 GFEQQPKFFKNPKILCLDVELELKAEKDNAEVRVDKVQEYQNIVDAEWRIIFSKLEAIVA 288
Query: 294 SGAQVVLSKLPIGDVATQYFADR 316
+GA+VVLSKLPIGD+ATQYFADR
Sbjct: 289 TGAKVVLSKLPIGDLATQYFADR 311
>sp|Q54ER7|TCPH_DICDI T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7
PE=3 SV=1
Length = 555
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/360 (54%), Positives = 244/360 (67%), Gaps = 51/360 (14%)
Query: 320 SQVFRQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKST 379
SQ+ R P I+LLKEGT+ SQG PQLISNINAC A+VD VRTTLGPRGMDKLI + T
Sbjct: 2 SQMIRPP-IVLLKEGTDTSQGLPQLISNINACCAIVDTVRTTLGPRGMDKLIYQSERQVT 60
Query: 380 ISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEIQKSDS------GEY------------- 420
ISNDGAT+MKLLDIVHPAA+TLVDIAKSQD+E+ + GE+
Sbjct: 61 ISNDGATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIH 120
Query: 421 -------------------------------RGLLEKCAATALSSKLIHQQKGFFSKMVV 449
R LEKCA+T+++SKLI K FFSKMVV
Sbjct: 121 PQIIIRAFRSACELAKQKIQELSVDIKPENMREFLEKCASTSMNSKLIASHKQFFSKMVV 180
Query: 450 DAVMSLDDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALL 509
DAV LDD + L+MIGIKK +GG L DS + G +FK+TF YAGFE QPK KNPK+ L
Sbjct: 181 DAVQLLDDNIDLDMIGIKKESGGGLGDSQFIAGAAFKRTFFYAGFEQQPKHIKNPKVLCL 240
Query: 510 NIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVAT 569
NIELELKAE+DNAEIR+ +YQ +V+AEWK+ ++KL+ IHASG VVLSKL IGD+AT
Sbjct: 241 NIELELKAEKDNAEIRISDPTKYQSLVNAEWKLFFDKLEAIHASGVNVVLSKLAIGDLAT 300
Query: 570 QYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTL 629
Q+FAD++MFCAGRVP++D++R +A G A+ T ++ V+GTC +F+E Q+G +R L
Sbjct: 301 QFFADKNMFCAGRVPDDDIRRVCRATGAAIQNTTSNIIPDVIGTCDLFEEVQVGGQRYNL 360
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 149/204 (73%)
Query: 8 FRAHFCEELRKKKKKKKKKKKKKKKKKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDK 67
F A F ++ + K K + + K +K E +P +YQ +V+AEWK+ ++KL+
Sbjct: 221 FYAGFEQQPKHIKNPKVLCLNIELELKAEKDNAEIRISDPTKYQSLVNAEWKLFFDKLEA 280
Query: 68 IHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDS 127
IHASG VVLSKL IGD+ATQ+FAD++MFCAGRVP++D++R +A G A+ T ++
Sbjct: 281 IHASGVNVVLSKLAIGDLATQFFADKNMFCAGRVPDDDIRRVCRATGAAIQNTTSNIIPD 340
Query: 128 VLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTI 187
V+GTC +F+E Q+G +R+N+F+GC +T TII+RGG EQF++E ERSLHD+IMIVRR
Sbjct: 341 VIGTCDLFEEVQVGGQRYNLFTGCTMTQTATIILRGGGEQFIDEAERSLHDSIMIVRRAR 400
Query: 188 RNHAVVAGGGAIEMELSKALRDYS 211
++ +VVAGGGAIEME+SK LRDYS
Sbjct: 401 KHRSVVAGGGAIEMEVSKYLRDYS 424
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 68/83 (81%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
GFE QPK KNPK+ LNIELELKAE+DNAEIR+ +YQ +V+AEWK+ ++KL+ IHA
Sbjct: 224 GFEQQPKHIKNPKVLCLNIELELKAEKDNAEIRISDPTKYQSLVNAEWKLFFDKLEAIHA 283
Query: 294 SGAQVVLSKLPIGDVATQYFADR 316
SG VVLSKL IGD+ATQ+FAD+
Sbjct: 284 SGVNVVLSKLAIGDLATQFFADK 306
>sp|P42943|TCPH_YEAST T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CCT7 PE=1 SV=1
Length = 550
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/359 (52%), Positives = 248/359 (69%), Gaps = 53/359 (14%)
Query: 324 RQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISND 383
+ P I++LKEGT+ SQGK Q+ISNINAC AV +A++ TLGP G D LIV N K+TISND
Sbjct: 6 QTPTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISND 65
Query: 384 GATIMKLLDIVHPAAKTLVDIAKSQDA--------------EIQK--------------- 414
GATI+KLLD+VHPAAKTLVDI+++QDA E+ K
Sbjct: 66 GATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLI 125
Query: 415 -----------------------SDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDA 451
S+ R LLE+CA TA+SSKLIH FF KM VDA
Sbjct: 126 MKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDA 185
Query: 452 VMSLD-DLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLN 510
V+SLD + L +IGIKK+ GGA+E+SL ++GV+FKKTF+YAGFE QPK + NPKI LN
Sbjct: 186 VLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLN 245
Query: 511 IELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQ 570
+ELELKAE+DNAE+R++ VE+YQ +VDAEW++++EKL ++ +GA +VLSKLPIGD+ATQ
Sbjct: 246 VELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQ 305
Query: 571 YFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTL 629
+FADR++FCAGRV +D+ R ++A GG++ +T D+ LGTCA+F+E QIGSER L
Sbjct: 306 FFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNL 364
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 140/178 (78%)
Query: 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 93
K +K E E ++YQ +VDAEW++++EKL ++ +GA +VLSKLPIGD+ATQ+FADR
Sbjct: 251 KAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADR 310
Query: 94 DMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKN 153
++FCAGRV +D+ R ++A GG++ +T D+ LGTCA+F+E QIGSER+N+F GC
Sbjct: 311 NIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQ 370
Query: 154 ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
A+TCT+++RGGAEQ + E ERSLHDAIMIV+R ++N +VAGGGA EME+SK LRDYS
Sbjct: 371 AKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYS 428
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 72/83 (86%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
GFE QPK + NPKI LN+ELELKAE+DNAE+R++ VE+YQ +VDAEW++++EKL ++
Sbjct: 228 GFEQQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEE 287
Query: 294 SGAQVVLSKLPIGDVATQYFADR 316
+GA +VLSKLPIGD+ATQ+FADR
Sbjct: 288 TGANIVLSKLPIGDLATQFFADR 310
>sp|P54409|TCPH_TETPY T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1
Length = 558
Score = 351 bits (901), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 189/359 (52%), Positives = 239/359 (66%), Gaps = 55/359 (15%)
Query: 325 QPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDG 384
QP ILLLK+GT+ SQGK Q+ISNINA Q++V+ V+TTLGPRGMDKLI + N +TISNDG
Sbjct: 3 QPTILLLKDGTDTSQGKAQIISNINAVQSIVEIVKTTLGPRGMDKLI-EGNRGATISNDG 61
Query: 385 ATIMKLLDIV--------------------------------------------HP---- 396
ATI+ LLDIV HP
Sbjct: 62 ATILNLLDIVHPAAKTLVDIAKAQDDEVGDGTTSVCLLAGELLKESKNFIEEGMHPQIVT 121
Query: 397 -----AAKTLVDIAKSQDAEIQKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDA 451
A K + + + GE R +L KCA T+L+SKL+ K FFS+MVV A
Sbjct: 122 KGYKEALKLALTFLQENSYSVADKSDGEKREMLLKCAQTSLNSKLLAHYKEFFSEMVVQA 181
Query: 452 VMSLD-DLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLN 510
V +LD +LL ++IGIK V GG++ DS+LV GV+FKKTF+YAGFE QPK + NPKI LLN
Sbjct: 182 VETLDTNLLDKDLIGIKMVTGGSVTDSVLVKGVAFKKTFSYAGFEQQPKKFANPKICLLN 241
Query: 511 IELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQ 570
IELELKAE++NAEIR+D+ ++Y+ +VDAEW+++YEKL KI SGAQ+VLSKLPIGD+ATQ
Sbjct: 242 IELELKAEKENAEIRIDNPDDYKSIVDAEWELIYEKLRKIVESGAQIVLSKLPIGDLATQ 301
Query: 571 YFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTL 629
YFADR++FCAGRV ED+KR KA G V TT + L+ VLGTC +F+E+QIG+ER L
Sbjct: 302 YFADRNIFCAGRVDAEDIKRVQKATGSIVQTTVNGLSQDVLGTCGMFEEQQIGAERYNL 360
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 142/178 (79%)
Query: 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 93
K +K+ E + PD+Y+ +VDAEW+++YEKL KI SGAQ+VLSKLPIGD+ATQYFADR
Sbjct: 247 KAEKENAEIRIDNPDDYKSIVDAEWELIYEKLRKIVESGAQIVLSKLPIGDLATQYFADR 306
Query: 94 DMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKN 153
++FCAGRV ED+KR KA G V TT + L+ VLGTC +F+E+QIG+ER+N+F C +
Sbjct: 307 NIFCAGRVDAEDIKRVQKATGSIVQTTVNGLSQDVLGTCGMFEEQQIGAERYNLFQDCPH 366
Query: 154 ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
+++ TII+RGGAEQF+ E ERSL+DAIMIVRR ++ + +V GGGAIE+E+S+ LR +S
Sbjct: 367 SKSATIILRGGAEQFIAEAERSLNDAIMIVRRCMKANKIVPGGGAIELEISRLLRLHS 424
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 102/159 (64%), Gaps = 12/159 (7%)
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYSGLGDKVRTGHPSDN 225
E L+ + SL+ ++ + + VV A+E L L D +G K+ TG +
Sbjct: 152 EMLLKCAQTSLNSKLLAHYKEFFSEMVVQ---AVET-LDTNLLDKDLIGIKMVTGGSVTD 207
Query: 226 SF--------HAISPDGFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVV 277
S S GFE QPK + NPKI LLNIELELKAE++NAEIR+D+ ++Y+ +V
Sbjct: 208 SVLVKGVAFKKTFSYAGFEQQPKKFANPKICLLNIELELKAEKENAEIRIDNPDDYKSIV 267
Query: 278 DAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 316
DAEW+++YEKL KI SGAQ+VLSKLPIGD+ATQYFADR
Sbjct: 268 DAEWELIYEKLRKIVESGAQIVLSKLPIGDLATQYFADR 306
>sp|O77323|TCPH_PLAF7 T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate
3D7) GN=MAL3P3.6 PE=3 SV=1
Length = 539
Score = 332 bits (852), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 179/366 (48%), Positives = 230/366 (62%), Gaps = 55/366 (15%)
Query: 320 SQVFRQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKST 379
S + P I+LLKEGT+ +QG+ Q+I NINACQ +VD V+TTLGPRGMDKLI + T
Sbjct: 2 SHLMSLP-IVLLKEGTDTAQGRSQIIRNINACQIIVDIVKTTLGPRGMDKLIYTER-DVT 59
Query: 380 ISNDGATIMKLLDIVHPAAKTL-------------------------------------- 401
I+NDGAT+M LL+I HPAA L
Sbjct: 60 ITNDGATVMNLLNISHPAASILVDIAKSQDDEVGDGTTSVVVVAGELLNEAKGLLNDGIE 119
Query: 402 -------------VDIAKSQDAEIQKSDSGE--YRGLLEKCAATALSSKLIHQQKGFFSK 446
V I K + + S+ E R +L KCA TAL+SKL+ K FF +
Sbjct: 120 PNMIIDGFRNACNVAINKLNELSLNFSNKNEEEKRSILLKCAQTALNSKLVSNHKEFFGE 179
Query: 447 MVVDAVMSLDDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKI 506
+VV+AV L D L + IGIKKV GG+ D+ L+ GV+FKKTF+YAGFE QPK + NPKI
Sbjct: 180 LVVNAVYKLGDNLDKSNIGIKKVTGGSCLDTQLIYGVAFKKTFSYAGFEQQPKKFINPKI 239
Query: 507 ALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGD 566
LLN+ELELKAE++NAE+R+++ EY +V AEW I+++KL+ I GA +VLSKLPIGD
Sbjct: 240 LLLNVELELKAEKENAEVRIENPNEYNSIVQAEWDIIFKKLNLIKDCGANIVLSKLPIGD 299
Query: 567 VATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
+ATQ+FAD D+FCAGRV + DLKRT A G V T+ +LND VLGTC VF+E QIG+ER
Sbjct: 300 IATQFFADHDIFCAGRVEDADLKRTANATGALVQTSLFNLNDDVLGTCGVFEEVQIGNER 359
Query: 627 DTLNRE 632
+ +E
Sbjct: 360 YNIFKE 365
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 132/178 (74%)
Query: 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 93
K +K+ E E P+EY +V AEW I+++KL+ I GA +VLSKLPIGD+ATQ+FAD
Sbjct: 249 KAEKENAEVRIENPNEYNSIVQAEWDIIFKKLNLIKDCGANIVLSKLPIGDIATQFFADH 308
Query: 94 DMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKN 153
D+FCAGRV + DLKRT A G V T+ +LND VLGTC VF+E QIG+ER+N+F C
Sbjct: 309 DIFCAGRVEDADLKRTANATGALVQTSLFNLNDDVLGTCGVFEEVQIGNERYNIFKECLK 368
Query: 154 ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
++ TII+RGGA+QF+EE ERS++DAIMIV R I N +V G G+IEM+LSK LR YS
Sbjct: 369 TKSVTIILRGGAKQFIEEVERSINDAIMIVLRCITNSEIVPGAGSIEMQLSKYLRIYS 426
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
GFE QPK + NPKI LLN+ELELKAE++NAE+R+++ EY +V AEW I+++KL+ I
Sbjct: 226 GFEQQPKKFINPKILLLNVELELKAEKENAEVRIENPNEYNSIVQAEWDIIFKKLNLIKD 285
Query: 294 SGAQVVLSKLPIGDVATQYFADR 316
GA +VLSKLPIGD+ATQ+FAD
Sbjct: 286 CGANIVLSKLPIGDIATQFFADH 308
>sp|P54410|TCPH_TETTH T-complex protein 1 subunit eta (Fragment) OS=Tetrahymena
thermophila PE=3 SV=1
Length = 353
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 196/305 (64%), Gaps = 54/305 (17%)
Query: 382 NDGATIMKLLDIVHPAAKTLVDIAKSQDAEIQKSDSG----------EYRGLLEKCA--- 428
NDGATI+ LLDIVHPAAKTLVDIAK+QD E+ + E + +E+
Sbjct: 1 NDGATILNLLDIVHPAAKTLVDIAKAQDDEVGDGTTSVCLLAGELLKESKYFIEEGMHPQ 60
Query: 429 --------ATALSSKLIHQQ--------------------------------KGFFSKMV 448
A L+ + +H+ K FFS++V
Sbjct: 61 IITKGYKEALKLALQFLHENAHSVADKNETEKREMLIKCAQTSLNSKLLAHYKEFFSELV 120
Query: 449 VDAVMSLD-DLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIA 507
V AV +L+ +LL ++IGIK V GG++ DS LV GV+FKKTF+YAGFE QPK + NPKI
Sbjct: 121 VQAVETLETNLLDKDLIGIKMVTGGSVTDSFLVSGVAFKKTFSYAGFEQQPKKFNNPKIC 180
Query: 508 LLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDV 567
LLNIELELKAE++NAEIR+++ ++Y+ +VDAEW+++YEKL KI SGA +VLSKLPIGD+
Sbjct: 181 LLNIELELKAEKENAEIRIENPDDYKSIVDAEWELIYEKLRKIVESGANIVLSKLPIGDL 240
Query: 568 ATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERD 627
ATQYFADR++FCAGRV ED+KR K+ G V TT + L + VLGTC F+E QIG+ER
Sbjct: 241 ATQYFADRNIFCAGRVDAEDMKRVQKSTGAIVQTTVNGLTEDVLGTCNQFEEVQIGAERY 300
Query: 628 TLNRE 632
L ++
Sbjct: 301 NLFKD 305
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/165 (58%), Positives = 128/165 (77%)
Query: 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 93
K +K+ E E PD+Y+ +VDAEW+++YEKL KI SGA +VLSKLPIGD+ATQYFADR
Sbjct: 189 KAEKENAEIRIENPDDYKSIVDAEWELIYEKLRKIVESGANIVLSKLPIGDLATQYFADR 248
Query: 94 DMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKN 153
++FCAGRV ED+KR K+ G V TT + L + VLGTC F+E QIG+ER+N+F C +
Sbjct: 249 NIFCAGRVDAEDMKRVQKSTGAIVQTTVNGLTEDVLGTCNQFEEVQIGAERYNLFKDCPH 308
Query: 154 ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGA 198
+++ TII+RGGAEQF+ E ERSL+DAIMIVRR ++ + +V GGGA
Sbjct: 309 SKSATIILRGGAEQFIAEAERSLNDAIMIVRRCMKANKIVPGGGA 353
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 86/122 (70%), Gaps = 8/122 (6%)
Query: 203 LSKALRDYSGLGDKVRTGHPSDNSF--------HAISPDGFEMQPKTYKNPKIALLNIEL 254
L L D +G K+ TG +SF S GFE QPK + NPKI LLNIEL
Sbjct: 127 LETNLLDKDLIGIKMVTGGSVTDSFLVSGVAFKKTFSYAGFEQQPKKFNNPKICLLNIEL 186
Query: 255 ELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFA 314
ELKAE++NAEIR+++ ++Y+ +VDAEW+++YEKL KI SGA +VLSKLPIGD+ATQYFA
Sbjct: 187 ELKAEKENAEIRIENPDDYKSIVDAEWELIYEKLRKIVESGANIVLSKLPIGDLATQYFA 246
Query: 315 DR 316
DR
Sbjct: 247 DR 248
>sp|Q8SR53|TCPH_ENCCU T-complex protein 1 subunit eta OS=Encephalitozoon cuniculi (strain
GB-M1) GN=CCT7 PE=1 SV=1
Length = 511
Score = 273 bits (697), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/336 (44%), Positives = 206/336 (61%), Gaps = 54/336 (16%)
Query: 339 QGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAA 398
+GK Q++SN++ C + + + +TLGP GMDKL + + ++NDGATI+K ++I HP
Sbjct: 16 EGKLQVVSNVDVCTKIAEFLESTLGPYGMDKLFAGK--EIVVTNDGATILKHMNIRHPVG 73
Query: 399 KTLVDIAKSQDAEIQKS-----------------------DSGEYRGLLE---------- 425
+ LV +++SQD+E+ D G +G LE
Sbjct: 74 RLLVALSESQDSEVGDGTTSVVILTTEILSCLKPLIKDNFDLGCIKGCLEELRMMCIEHL 133
Query: 426 -------------KCAATALSSKLIHQQKGFFSKMVVDAV--MSLDDLLPLNMIGIKKVA 470
K A T ++SK I +K +FS+M+VDAV +DD IG+KKV
Sbjct: 134 EKMGMELDDEVLYKLAGTCITSKNIRHEKEYFSRMIVDAVKQAKIDDA---ESIGVKKVQ 190
Query: 471 GGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVE 530
GG++ DS+ V+G++F+K F YAG+E QPK NP+I LN+ELE K+ERDNAEIR+ VE
Sbjct: 191 GGSIGDSVAVNGIAFEKCFTYAGYEQQPKRILNPRILCLNVELEWKSERDNAEIRVGGVE 250
Query: 531 EYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKR 590
EYQ+VVDAEW I+ KLD+I +SGA VVLS L IGD ATQYFA +FCAGRV +EDL R
Sbjct: 251 EYQRVVDAEWAIIRRKLDEIISSGANVVLSSLSIGDYATQYFAKHGIFCAGRVSKEDLGR 310
Query: 591 TMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
+ +CGG+++ A D + LG CA+F+ERQ+G R
Sbjct: 311 VVGSCGGSIL-GATDYLEGSLGACALFEERQLGKFR 345
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 117/164 (71%), Gaps = 2/164 (1%)
Query: 48 DEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLK 107
+EYQ+VVDAEW I+ KLD+I +SGA VVLS L IGD ATQYFA +FCAGRV +EDL
Sbjct: 250 EEYQRVVDAEWAIIRRKLDEIISSGANVVLSSLSIGDYATQYFAKHGIFCAGRVSKEDLG 309
Query: 108 RTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQ 167
R + +CGG+++ A D + LG CA+F+ERQ+G R+N F G CT+I+RG ++
Sbjct: 310 RVVGSCGGSIL-GATDYLEGSLGACALFEERQLGKFRYNYFEG-GGTSACTMILRGPGQE 367
Query: 168 FLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
LEE RS+HDA+ +VR +R VV GGG++EMELS+ +R+ S
Sbjct: 368 VLEEIGRSVHDAVCVVRTALRTRKVVTGGGSVEMELSRIIREKS 411
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 64/81 (79%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
G+E QPK NP+I LN+ELE K+ERDNAEIR+ VEEYQ+VVDAEW I+ KLD+I +
Sbjct: 213 GYEQQPKRILNPRILCLNVELEWKSERDNAEIRVGGVEEYQRVVDAEWAIIRRKLDEIIS 272
Query: 294 SGAQVVLSKLPIGDVATQYFA 314
SGA VVLS L IGD ATQYFA
Sbjct: 273 SGANVVLSSLSIGDYATQYFA 293
>sp|Q9V2T4|THSB_SULAC Thermosome subunit beta OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsB PE=3 SV=2
Length = 553
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 190/366 (51%), Gaps = 61/366 (16%)
Query: 319 TSQVFRQPQ---ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQN 375
T+ V P+ +++LKEG+ + GK L NI A +AV +A++TT GPRGMDK++VD
Sbjct: 4 TATVATTPEGIPVIILKEGSSRTYGKEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSL 63
Query: 376 GKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAE---------------IQKSDSGEY 420
G TI+NDGATI+ +D+ HPAAK LV IAK QD E ++K++ Y
Sbjct: 64 GDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLY 123
Query: 421 RGL----------------------------------LEKCAATALSSKLIHQQKGFFSK 446
+ + L K A T+LSSK + + +
Sbjct: 124 KEIHPTIIVSGYKKAEEMAIKTIEEISTKVSVNDTEILRKVALTSLSSKAVAGAREHLAD 183
Query: 447 MVVDAVMSLDDL------LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKT 500
+VV A+ + +L + L+ + I K GG++ D+ +V G+ K + G PK
Sbjct: 184 IVVKAITQVAELRGDKWYVDLDNVQIVKKHGGSINDTQIVYGIIVDKEVVHPGM---PKR 240
Query: 501 YKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLS 560
+N KIALL+ LE++ +AEIR++ + +K +D E IL EK+DKI +GA VV+
Sbjct: 241 VENAKIALLDASLEVEKPELDAEIRINDPTQMKKFLDEEENILKEKVDKIAQTGANVVIC 300
Query: 561 KLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDER 620
+ I +VA Y A + + R + DL++ +A GG V++ +L LG + +ER
Sbjct: 301 QKGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTSQDLGYATLVEER 360
Query: 621 QIGSER 626
+IG ++
Sbjct: 361 KIGEDK 366
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 101/166 (60%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P + +K +D E IL EK+DKI +GA VV+ + I +VA Y A + + R + D
Sbjct: 268 DPTQMKKFLDEEENILKEKVDKIAQTGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSD 327
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
L++ +A GG V++ +L LG + +ER+IG ++ G KN + +I++RGG
Sbjct: 328 LEKLARATGGRVVSNIDELTSQDLGYATLVEERKIGEDKMVFIEGAKNPKAVSILIRGGL 387
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
E+ ++ETER+L DA+ V +R+ +AGGGA+E E++K LR Y+
Sbjct: 388 ERVVDETERALRDALGTVADVVRDGRAIAGGGAVETEIAKRLRKYA 433
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KIALL+ LE++ +AEIR++ + +K +D E IL EK+DKI +GA V
Sbjct: 238 PKRVENAKIALLDASLEVEKPELDAEIRINDPTQMKKFLDEEENILKEKVDKIAQTGANV 297
Query: 299 VLSKLPIGDVATQYFADR 316
V+ + I +VA Y A +
Sbjct: 298 VICQKGIDEVAQHYLAKK 315
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 177/358 (49%), Gaps = 56/358 (15%)
Query: 325 QPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDG 384
Q IL+LKEGT+ QGK +NI A +A+ DAVRTTLGP+GMDK++VD G ISNDG
Sbjct: 5 QVPILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDG 64
Query: 385 ATIMKLLDIVHPAAKTLVDIAKSQDAEIQKSD------SGE------------------- 419
ATI+K +D+ HP AK +V+++K+QD + SGE
Sbjct: 65 ATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVIS 124
Query: 420 --YR--------------------GLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 457
YR L K A TALS K F + +VV AV ++ +
Sbjct: 125 NGYRLAVNEARKIIDEIAEKSTDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAE 184
Query: 458 ------LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNI 511
++ I + K GG++ D+ + G+ K ++ P KN KIAL++
Sbjct: 185 VRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKM---PDVVKNAKIALIDS 241
Query: 512 ELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQY 571
LE+K A++++ + Q ++ E + ++KI SGA VVL + I DVA Y
Sbjct: 242 ALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHY 301
Query: 572 FADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTL 629
A ++ RV + D+++ KA G ++T DL SVLG +ER+IG +R T
Sbjct: 302 LAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTF 359
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 141/279 (50%), Gaps = 10/279 (3%)
Query: 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR 93
KK + E + + +P + Q ++ E + ++KI SGA VVL + I DVA Y A
Sbjct: 246 KKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKE 305
Query: 94 DMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKN 153
++ RV + D+++ KA G ++T DL SVLG +ER+IG +R GCKN
Sbjct: 306 GIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN 365
Query: 154 ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYSGL 213
+ +I++RGG + + E ER+L+DAI +V T + + GGGA+E EL+ L Y+
Sbjct: 366 PKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYAN- 424
Query: 214 GDKVRTGHPSDNSFHAISPDGFEMQPKTY-KNPKIALLNIELELKAERDNAEIRLDSVEE 272
G + A + E+ P+T +N I +N ++LKAE + I + +
Sbjct: 425 ----SVGGREQLAIEAFAK-ALEIIPRTLAENAGIDPINTLIKLKAEHEKGRISVGVDLD 479
Query: 273 YQKVVDAEWKILYEKLD-KIHA--SGAQVVLSKLPIGDV 308
V D + K + + L K HA S +V L I DV
Sbjct: 480 NNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDV 518
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
P KN KIAL++ LE+K A++++ + Q ++ E + ++KI SGA V
Sbjct: 228 PDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANV 287
Query: 299 VLSKLPIGDVATQYFA 314
VL + I DVA Y A
Sbjct: 288 VLCQKGIDDVAQHYLA 303
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 181/361 (50%), Gaps = 59/361 (16%)
Query: 320 SQVFRQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKST 379
+Q+ QP IL+L EGT+ G+ NI A + + + VRTTLGP+GMDK++VD G
Sbjct: 2 AQLAGQP-ILILPEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 380 ISNDGATIMKLLDIVHPAAKTLVDIAKSQDAE---------------------------- 411
I+NDGATI+ +DI HPAAK +V++AK+QD E
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIH 120
Query: 412 ---------------------IQKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVD 450
I K + +L K A TA++ K +++ + +K+ V+
Sbjct: 121 PSIIIKGYTLASQKAQEILDSIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVE 180
Query: 451 AVMSL----DDLLPLNMIGIK--KVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNP 504
AV + D L +++ IK K GGA+ D+ L+ GV K + G PK +N
Sbjct: 181 AVKLVAEEKDGKLKVDIDNIKLEKKEGGAVRDTRLIRGVVIDKEVVHPGM---PKRIENA 237
Query: 505 KIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPI 564
KIAL+N LE+K +AEIR+ S E+ Q ++ E K+L E +DKI GA VV + I
Sbjct: 238 KIALINDALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKGI 297
Query: 565 GDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGS 624
D+A Y A + RV + D+++ KA G ++T DL LG + +ER++
Sbjct: 298 DDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAG 357
Query: 625 E 625
E
Sbjct: 358 E 358
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 95/165 (57%)
Query: 47 PDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 106
P++ Q ++ E K+L E +DKI GA VV + I D+A Y A + RV + D+
Sbjct: 262 PEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGILAVRRVKKSDM 321
Query: 107 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAE 166
++ KA G ++T DL LG + +ER++ E GCKN + TI++RGG E
Sbjct: 322 EKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGENMIFVEGCKNPKAVTILIRGGTE 381
Query: 167 QFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
++E ER+L DAI +V+ + + ++AGGGA E+ELS L +Y+
Sbjct: 382 HVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKLDEYA 426
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KIAL+N LE+K +AEIR+ S E+ Q ++ E K+L E +DKI GA V
Sbjct: 231 PKRIENAKIALINDALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANV 290
Query: 299 VLSKLPIGDVATQYFA 314
V + I D+A Y A
Sbjct: 291 VFVQKGIDDLAQHYLA 306
>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
GN=thsB PE=3 SV=1
Length = 502
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 58/346 (16%)
Query: 336 ENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVH 395
+ + G+ L +NI A +A+ + ++TT GP+GMDK++VD G TI+NDGATI+ +I H
Sbjct: 1 QRTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQH 60
Query: 396 PAAKTLVDIAKSQDAEIQKSD------SGE---------------------YRG------ 422
PAAK LV +AKSQD+E+ +GE YR
Sbjct: 61 PAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEAL 120
Query: 423 ----------------LLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL------DDLLP 460
LL K A T+L+SK +H + FF+ + V AV + + +
Sbjct: 121 KILDQMAEPIDLNNEELLRKVARTSLTSKAVHDAREFFADIAVKAVKQVVEKRGDKNYVD 180
Query: 461 LNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAERD 520
L+ I I K GGAL DS+LV G+ K + G P+ +N KI LL+ LE++
Sbjct: 181 LDNIQIIKKYGGALLDSMLVYGIVLDKEVVHPGM---PRRVENAKIVLLDAPLEIEKPEI 237
Query: 521 NAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCA 580
+AEIR++ E+ +K + E +IL + +DKI + GA VV+ + I +VA + A + +
Sbjct: 238 DAEIRINDPEQLEKFLQQEEEILMKMVDKIASVGANVVVCQKGIDEVAQHFLAKKGILAV 297
Query: 581 GRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
RV DL++ +A GG +++ DL LG A+ +ER++G ++
Sbjct: 298 RRVKRSDLEKLERATGGRIVSNIEDLTPEDLGYAALVEERKVGEDK 343
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 101/163 (61%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P++ +K + E +IL + +DKI + GA VV+ + I +VA + A + + RV D
Sbjct: 245 DPEQLEKFLQQEEEILMKMVDKIASVGANVVVCQKGIDEVAQHFLAKKGILAVRRVKRSD 304
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
L++ +A GG +++ DL LG A+ +ER++G ++ GCKN R+ +I++RGG
Sbjct: 305 LEKLERATGGRIVSNIEDLTPEDLGYAALVEERKVGEDKMVFIEGCKNPRSVSIVIRGGL 364
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALR 208
E+ ++E ERS+ DA+ V +R+ V+ GGGA E+EL+K +R
Sbjct: 365 ERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHIR 407
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
P+ +N KI LL+ LE++ +AEIR++ E+ +K + E +IL + +DKI + GA V
Sbjct: 215 PRRVENAKIVLLDAPLEIEKPEIDAEIRINDPEQLEKFLQQEEEILMKMVDKIASVGANV 274
Query: 299 VLSKLPIGDVATQYFA 314
V+ + I +VA + A
Sbjct: 275 VVCQKGIDEVAQHFLA 290
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 183/354 (51%), Gaps = 58/354 (16%)
Query: 328 ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATI 387
+L+LKEGT+ + G+ NI A + + +AV++TLGP+GMDK++VD G I+NDG TI
Sbjct: 9 VLILKEGTQRTVGRDAQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTI 68
Query: 388 MKLLDIVHPAAKTLVDIAKSQDAEIQKSDS------GEY------------------RG- 422
+K +D+ HPAAK ++++AK+QD E+ + GE RG
Sbjct: 69 LKEMDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGY 128
Query: 423 ------------------------LLEKCAATALSSKLIHQQKGFFSKMVVDAVM----S 454
L+K AATA++ K S +VV+AV
Sbjct: 129 RMAANKAVEILESIAMDIDVEDEETLKKIAATAITGKHSEYALDHLSSLVVEAVKRVAEK 188
Query: 455 LDDLLPLN--MIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIE 512
+DD ++ I ++K GG++ D+ LV+G+ K + G PK KN KIA+L
Sbjct: 189 VDDRYKVDEDNIKLEKRQGGSVADTKLVNGIVIDKEVVHPGM---PKRVKNAKIAVLKAA 245
Query: 513 LELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYF 572
LE+K +AEIR+ ++ K ++ E K+L E +D++ +GA VV + I D+A Y
Sbjct: 246 LEVKETETDAEIRITDPDQLMKFIEQEEKMLKEMVDRLAEAGANVVFCQKGIDDLAQYYL 305
Query: 573 ADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
A + RV + D+++ KACG ++T ++ + LG + +ER++G E+
Sbjct: 306 AKAGILAVRRVKQSDIEKIAKACGAKIITDLREITSADLGEAELVEERKVGDEK 359
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 103/166 (62%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+PD+ K ++ E K+L E +D++ +GA VV + I D+A Y A + RV + D
Sbjct: 261 DPDQLMKFIEQEEKMLKEMVDRLAEAGANVVFCQKGIDDLAQYYLAKAGILAVRRVKQSD 320
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
+++ KACG ++T ++ + LG + +ER++G E+ GCKN + TI++RGG+
Sbjct: 321 IEKIAKACGAKIITDLREITSADLGEAELVEERKVGDEKMVFIEGCKNPKAVTILIRGGS 380
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
E ++E ERSL DAI +V+ + + VVAGGGA E+E++ +RD++
Sbjct: 381 EHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEIEVALKIRDWA 426
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK KN KIA+L LE+K +AEIR+ ++ K ++ E K+L E +D++ +GA V
Sbjct: 231 PKRVKNAKIAVLKAALEVKETETDAEIRITDPDQLMKFIEQEEKMLKEMVDRLAEAGANV 290
Query: 299 VLSKLPIGDVATQYFA 314
V + I D+A Y A
Sbjct: 291 VFCQKGIDDLAQYYLA 306
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 182/361 (50%), Gaps = 59/361 (16%)
Query: 320 SQVFRQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKST 379
+Q+ QP +++L EGT+ G+ NI A + + + VRTTLGP+GMDK++VD G
Sbjct: 2 AQLAGQP-VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 380 ISNDGATIMKLLDIVHPAAKTLVDIAKSQDAE---------------------------- 411
I+NDGATI+ +DI HPAAK +V++AK+QD E
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIH 120
Query: 412 ---------------------IQKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVD 450
I K E R +L+K A T+++ K +++ + +++ V+
Sbjct: 121 PSIIIKGYALAAEKAQEILDEIAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVE 180
Query: 451 AVMSLDDLL------PLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNP 504
AV + + + L+ I +K GG+++D+ L+ GV K + G PK +
Sbjct: 181 AVKQVAEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGM---PKRVEGA 237
Query: 505 KIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPI 564
KIAL+N LE+K +AEIR+ S E+ Q ++ E K+L E +DKI GA VV + I
Sbjct: 238 KIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGI 297
Query: 565 GDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGS 624
D+A Y A + RV + D+++ KA G ++T DL LG + ++R++
Sbjct: 298 DDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAG 357
Query: 625 E 625
E
Sbjct: 358 E 358
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 94/165 (56%)
Query: 47 PDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 106
P++ Q ++ E K+L E +DKI GA VV + I D+A Y A + RV + D+
Sbjct: 262 PEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDM 321
Query: 107 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAE 166
++ KA G ++T DL LG + ++R++ E GCKN + TI++RGG E
Sbjct: 322 EKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTE 381
Query: 167 QFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
++E ER+L DA+ +V+ + + +VA GGA E+ELS L +Y+
Sbjct: 382 HVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEYA 426
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK + KIAL+N LE+K +AEIR+ S E+ Q ++ E K+L E +DKI GA V
Sbjct: 231 PKRVEGAKIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANV 290
Query: 299 VLSKLPIGDVATQYFA 314
V + I D+A Y A
Sbjct: 291 VFVQKGIDDLAQHYLA 306
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 182/361 (50%), Gaps = 59/361 (16%)
Query: 320 SQVFRQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKST 379
+Q+ QP +++L EGT+ G+ NI A + + + VRTTLGP+GMDK++VD G
Sbjct: 2 AQLAGQP-VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 380 ISNDGATIMKLLDIVHPAAKTLVDIAKSQDAE---------------------------- 411
I+NDGATI+ +DI HPAAK +V++AK+QD E
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIH 120
Query: 412 ---------------------IQKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVD 450
I K E R +L+K A T+++ K +++ + +++ V+
Sbjct: 121 PSIIIKGYALAAEKAQEILDEIAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVE 180
Query: 451 AVMSLDDLL------PLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNP 504
AV + + + L+ I +K GG+++D+ L+ GV K + G PK +
Sbjct: 181 AVKQVAEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGM---PKRVEGA 237
Query: 505 KIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPI 564
KIAL+N LE+K +AEIR+ S E+ Q ++ E K+L E +DKI GA VV + I
Sbjct: 238 KIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGI 297
Query: 565 GDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGS 624
D+A Y A + RV + D+++ KA G ++T DL LG + ++R++
Sbjct: 298 DDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAG 357
Query: 625 E 625
E
Sbjct: 358 E 358
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 94/165 (56%)
Query: 47 PDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 106
P++ Q ++ E K+L E +DKI GA VV + I D+A Y A + RV + D+
Sbjct: 262 PEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDM 321
Query: 107 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAE 166
++ KA G ++T DL LG + ++R++ E GCKN + TI++RGG E
Sbjct: 322 EKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTE 381
Query: 167 QFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
++E ER+L DA+ +V+ + + +VA GGA E+EL+ L +Y+
Sbjct: 382 HVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYA 426
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK + KIAL+N LE+K +AEIR+ S E+ Q ++ E K+L E +DKI GA V
Sbjct: 231 PKRVEGAKIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANV 290
Query: 299 VLSKLPIGDVATQYFA 314
V + I D+A Y A
Sbjct: 291 VFVQKGIDDLAQHYLA 306
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 179/361 (49%), Gaps = 59/361 (16%)
Query: 320 SQVFRQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKST 379
+Q+ QP IL+L EGT+ G+ NI A + + + VRTTLGP+GMDK++VD G
Sbjct: 2 AQLAGQP-ILILPEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 380 ISNDGATIMKLLDIVHPAAKTLVDIAKSQDAE---------------------------- 411
I+NDGATI+ +DI HPAAK +V++AK+QD E
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIH 120
Query: 412 ---------------------IQKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVD 450
I K + +L K A TA++ K +++ + +K+ V+
Sbjct: 121 PSIVIKGYMLAAEKAQEILDSIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVE 180
Query: 451 AVMSLDD------LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNP 504
AV + + + ++ I +K GGA+ D+ L+ GV K + G PK +
Sbjct: 181 AVKLVAEEKDGKFKVDIDNIKFEKKEGGAVSDTKLIRGVVIDKEVVHPGM---PKRVEKA 237
Query: 505 KIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPI 564
KIAL+N LE+K +AEIR+ S E+ Q ++ E K+L E +DKI GA VV + I
Sbjct: 238 KIALINDALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKGI 297
Query: 565 GDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGS 624
D+A Y A + RV + D+++ KA G ++T DL LG + +ER++
Sbjct: 298 DDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAG 357
Query: 625 E 625
E
Sbjct: 358 E 358
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 95/165 (57%)
Query: 47 PDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 106
P++ Q ++ E K+L E +DKI GA VV + I D+A Y A + RV + D+
Sbjct: 262 PEQLQAFLEQEEKMLKEMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGILAVRRVKKSDM 321
Query: 107 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAE 166
++ KA G ++T DL LG + +ER++ E GCKN + TI++RGG E
Sbjct: 322 EKLAKATGAKIVTNIRDLTPEDLGEAELVEERKVAGENMIFVEGCKNPKAVTILIRGGTE 381
Query: 167 QFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
++E ER+L DA+ +V+ + + ++AGGGA E+ELS L +Y+
Sbjct: 382 HVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKLDEYA 426
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK + KIAL+N LE+K +AEIR+ S E+ Q ++ E K+L E +DKI GA V
Sbjct: 231 PKRVEKAKIALINDALEVKETETDAEIRITSPEQLQAFLEQEEKMLKEMVDKIKEVGANV 290
Query: 299 VLSKLPIGDVATQYFA 314
V + I D+A Y A
Sbjct: 291 VFVQKGIDDLAQHYLA 306
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 183/355 (51%), Gaps = 58/355 (16%)
Query: 327 QILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGAT 386
Q+L+L EG + G+ NI A + V + VRTTLGP GMDK++VD+ G ++NDG T
Sbjct: 10 QVLILPEGYQRFVGRDAQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVT 69
Query: 387 IMKLLDIVHPAAKTLVDIAKSQDAEIQKSDS------GEY------------------RG 422
I++ +DI HPAAK +V++AK+Q+ E+ + GE RG
Sbjct: 70 ILEEMDIEHPAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARG 129
Query: 423 -------------------------LLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD 457
L+K A TA++ K + + + + +++VV AV + +
Sbjct: 130 YRMAVEKAEEILEEIAEEIDPDDEETLKKIAKTAMTGKGVEKARDYLAELVVKAVKQVAE 189
Query: 458 ------LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNI 511
++ + I ++K GG LED+ LV G+ K + G P+ +N KIALLN
Sbjct: 190 EEDGEIVIDTDHIKLEKKEGGGLEDTELVKGMVIDKERVHPGM---PRRVENAKIALLNC 246
Query: 512 ELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQY 571
+E+K +AEIR+ E+ Q ++ E ++L E +DKI +GA VV + I D+A Y
Sbjct: 247 PIEVKETETDAEIRITDPEQLQAFIEEEERMLSEMVDKIAETGANVVFCQKGIDDLAQHY 306
Query: 572 FADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
A + + RV + D+++ +A G ++T DL++ LG V +E+++ ++
Sbjct: 307 LAKKGILAVRRVKKSDMQKLARATGARIVTNIDDLSEEDLGEAEVVEEKKVAGDK 361
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 127/221 (57%), Gaps = 7/221 (3%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P++ Q ++ E ++L E +DKI +GA VV + I D+A Y A + + RV + D
Sbjct: 263 DPEQLQAFIEEEERMLSEMVDKIAETGANVVFCQKGIDDLAQHYLAKKGILAVRRVKKSD 322
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
+++ +A G ++T DL++ LG V +E+++ ++ GCK+ + TI++RGG
Sbjct: 323 MQKLARATGARIVTNIDDLSEEDLGEAEVVEEKKVAGDKMIFVEGCKDPKAVTILIRGGT 382
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYSGLGDKVRTGHPSDN 225
E ++E ER++ DAI +V + + VVAGGGA E+E+++ LRD++ D V
Sbjct: 383 EHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEVEVARQLRDFA---DGVEGREQLAV 439
Query: 226 SFHAISPDGFEMQPKTY-KNPKIALLNIELELKAERDNAEI 265
A D E+ P+T +N + +++ ++L+A+ ++ ++
Sbjct: 440 EAFA---DALEIIPRTLAENSGLDPIDVLVQLRAKHEDGQV 477
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 195 GGGAIEMELSKALRDYSGLGDKVRTGHPSDNSFHAISPDGFEMQPKTYKNPKIALLNIEL 254
GGG + EL K + + DK R HP P+ +N KIALLN +
Sbjct: 209 GGGLEDTELVKGM-----VIDKERV-HPG--------------MPRRVENAKIALLNCPI 248
Query: 255 ELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFA 314
E+K +AEIR+ E+ Q ++ E ++L E +DKI +GA VV + I D+A Y A
Sbjct: 249 EVKETETDAEIRITDPEQLQAFIEEEERMLSEMVDKIAETGANVVFCQKGIDDLAQHYLA 308
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 185/354 (52%), Gaps = 58/354 (16%)
Query: 328 ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATI 387
+++LKEGT+ S G+ L +NI A +A+ ++TT GP+GMDK++VD G TI+N+GATI
Sbjct: 16 VIILKEGTQRSYGREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATI 75
Query: 388 MKLLDIVHPAAKTLVDIAKSQDAEIQKSD------SGE---------------------Y 420
+ +D+ HPAAK LV I+K Q+ E +GE Y
Sbjct: 76 LDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGY 135
Query: 421 RGLLEKC----------------------AATALSSKLIHQQKGFFSKMVVDAVMSLDD- 457
+ L K A T+L+SK + + + +F+++ V+AV ++ +
Sbjct: 136 KEALRKASEVIESIAEPVSYDDVEKLKLIAKTSLNSKAVAEARDYFAELAVEAVRTVAER 195
Query: 458 -----LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIE 512
+ LN I I K GG+L D+ LV G+ K + P+ +N +IALL+
Sbjct: 196 RGDRWYVDLNNIQIVKKHGGSLRDTRLVRGIVLDKEVVHPDM---PRRVENARIALLDTP 252
Query: 513 LELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYF 572
LE++ + EI + S E+ + + + + +IL EK++KI A+GA VV+++ I DVA +
Sbjct: 253 LEIEKPEIDLEISITSPEQIKALYEKQERILQEKIEKIAATGANVVITQKGIDDVAQHFL 312
Query: 573 ADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
A + + RV D+++ +A G ++T DL LG + +ER++G ++
Sbjct: 313 AKKGILAVRRVKRSDIEKIARATGARIVTDIEDLRPEDLGYAELVEERKVGEDK 366
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 104/165 (63%)
Query: 47 PDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 106
P++ + + + + +IL EK++KI A+GA VV+++ I DVA + A + + RV D+
Sbjct: 269 PEQIKALYEKQERILQEKIEKIAATGANVVITQKGIDDVAQHFLAKKGILAVRRVKRSDI 328
Query: 107 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAE 166
++ +A G ++T DL LG + +ER++G ++ G KN ++ TI++RGG E
Sbjct: 329 EKIARATGARIVTDIEDLRPEDLGYAELVEERKVGEDKMVFIEGAKNPKSVTILLRGGFE 388
Query: 167 QFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
+ ++E ERSLHDA+ +V I + +VAGGGA+E E++K L +Y+
Sbjct: 389 RLVDEAERSLHDALSVVADAIMDGKIVAGGGAVEAEVAKVLYEYA 433
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 230 ISPDGFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLD 289
+ PD P+ +N +IALL+ LE++ + EI + S E+ + + + + +IL EK++
Sbjct: 233 VHPD----MPRRVENARIALLDTPLEIEKPEIDLEISITSPEQIKALYEKQERILQEKIE 288
Query: 290 KIHASGAQVVLSKLPIGDVATQYFADR 316
KI A+GA VV+++ I DVA + A +
Sbjct: 289 KIAATGANVVITQKGIDDVAQHFLAKK 315
>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
Length = 554
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 187/366 (51%), Gaps = 61/366 (16%)
Query: 319 TSQVFRQPQ---ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQN 375
T+ V P+ +++LKEG+ + GK L +NI A +A+ +A+++T GPRGMDK++VD
Sbjct: 3 TATVATTPEGIPVIILKEGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSL 62
Query: 376 GKSTISNDGATIMKLLDIVHPAAKTLVDIA-----------------------KSQD--- 409
G TI+NDGATI+ +D+ HP K LV IA K++D
Sbjct: 63 GDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLY 122
Query: 410 -----------------------AEIQKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSK 446
EI + + +L K A T+L SK + + + +
Sbjct: 123 KEIHPTIIVSGYKKAEEIALKTIQEIAQPVTINDTDVLRKVALTSLGSKAVAGAREYLAD 182
Query: 447 MVVDAVMSLDDL------LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKT 500
+VV AV + +L + L+ + I K GG++ D+ LV G+ K + G PK
Sbjct: 183 LVVKAVAQVAELRGDKWYVDLDNVQIVKKHGGSVNDTQLVYGIVVDKEVVHPGM---PKR 239
Query: 501 YKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLS 560
+N KIALL+ LE++ +AEIR++ + K ++ E IL EK+DKI A+GA VV+
Sbjct: 240 IENAKIALLDASLEVEKPELDAEIRINDPTQMHKFLEEEENILKEKVDKIAATGANVVIC 299
Query: 561 KLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDER 620
+ I +VA Y A + + R + DL++ +A GG V++ +L LG A+ +ER
Sbjct: 300 QKGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEER 359
Query: 621 QIGSER 626
++G ++
Sbjct: 360 KVGEDK 365
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 104/166 (62%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P + K ++ E IL EK+DKI A+GA VV+ + I +VA Y A + + R + D
Sbjct: 267 DPTQMHKFLEEEENILKEKVDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSD 326
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
L++ +A GG V++ +L LG A+ +ER++G ++ G KN ++ +I++RGG
Sbjct: 327 LEKLARATGGRVISNIDELTSQDLGYAALVEERKVGEDKMVFVEGAKNPKSVSILIRGGL 386
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
E+ ++ETER+L DA+ V IR+ VAGGGA+E+E++K LR Y+
Sbjct: 387 ERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYA 432
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KIALL+ LE++ +AEIR++ + K ++ E IL EK+DKI A+GA V
Sbjct: 237 PKRIENAKIALLDASLEVEKPELDAEIRINDPTQMHKFLEEEENILKEKVDKIAATGANV 296
Query: 299 VLSKLPIGDVATQYFADR 316
V+ + I +VA Y A +
Sbjct: 297 VICQKGIDEVAQHYLAKK 314
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 185/357 (51%), Gaps = 59/357 (16%)
Query: 325 QPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDG 384
QP +L+L+EGT+ + G+ NI A + + +AVR+TLGP+GMDK++VD G I+NDG
Sbjct: 7 QP-VLILREGTQRTVGRDAQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDG 65
Query: 385 ATIMKLLDIVHPAAKTLVDIAKSQDAEIQKSDS------GE------------------- 419
TI+K +D+ HPAAK ++++AK+QD E+ + GE
Sbjct: 66 VTILKEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIA 125
Query: 420 --YR----------------------GLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL 455
YR +L+K A TA++ K +++ V+AV +
Sbjct: 126 NGYRYAAEKALEILNEIAIPISKDDDEILKKIATTAMTGKGAEVAIDKLAEIAVNAVKMI 185
Query: 456 DDL------LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALL 509
+ + + I I+K GG++E++ LVDG+ K + G PK +N KI LL
Sbjct: 186 AEESNGQVEVNTDYIKIEKRQGGSIEETELVDGIVLDKEVVHPGM---PKRVENAKILLL 242
Query: 510 NIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVAT 569
+ LE+K +A+IR+ E+ QK ++ E +L E +DKI +GA VV + I D+A
Sbjct: 243 DSALEVKETEIDAKIRITDPEKLQKFIEQEEAMLKEMVDKIVNAGANVVFCQKGIDDLAQ 302
Query: 570 QYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
Y A + RV + D+++ KA G V+T D++ LG A+ +ER++G E+
Sbjct: 303 YYLAKAGVLAVRRVKKSDMEKLAKATGAKVLTDLRDISSEDLGEAALVEERKVGDEK 359
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 143/271 (52%), Gaps = 18/271 (6%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P++ QK ++ E +L E +DKI +GA VV + I D+A Y A + RV + D
Sbjct: 261 DPEKLQKFIEQEEAMLKEMVDKIVNAGANVVFCQKGIDDLAQYYLAKAGVLAVRRVKKSD 320
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
+++ KA G V+T D++ LG A+ +ER++G E+ +GCKN + TI+VRGG
Sbjct: 321 MEKLAKATGAKVLTDLRDISSEDLGEAALVEERKVGDEKMVFVTGCKNPKAVTILVRGGT 380
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYSGLGDKVRTGHPSDN 225
E +EE R + DA+ V + + VV G GA E+E+S LR+++ PS
Sbjct: 381 EHVVEEIARGIEDAVRAVACAVEDGKVVVGAGAPEIEVSLKLREWA----------PSLG 430
Query: 226 SFHAISPDGF----EMQPKTY-KNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAE 280
++ + F E+ P+T +N + +++ +ELKA + + + KVVD +
Sbjct: 431 GREQLAVEAFATALEIIPRTLAENAGLDPIDVLVELKAAHEKGQKYAGVDVDTGKVVDMK 490
Query: 281 WKILYEKLD-KIHASGA--QVVLSKLPIGDV 308
+ ++E L K A G+ +V + L I D+
Sbjct: 491 ERGVFEPLRVKTQAIGSATEVAVMILRIDDI 521
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KI LL+ LE+K +A+IR+ E+ QK ++ E +L E +DKI +GA V
Sbjct: 231 PKRVENAKILLLDSALEVKETEIDAKIRITDPEKLQKFIEQEEAMLKEMVDKIVNAGANV 290
Query: 299 VLSKLPIGDVATQYFA 314
V + I D+A Y A
Sbjct: 291 VFCQKGIDDLAQYYLA 306
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 181/361 (50%), Gaps = 59/361 (16%)
Query: 320 SQVFRQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKST 379
+Q+ QP +++L EGT+ G+ NI A + + + VRTTLGP+GMDK++VD G
Sbjct: 2 AQLAGQP-VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 380 ISNDGATIMKLLDIVHPAAKTLVDIAKSQDAE---------------------------- 411
I+NDGATI+ +DI HPAAK +V++AK+QD E
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIH 120
Query: 412 ---------------------IQKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVD 450
I + E R +L+K A TA++ K +++ + +++ V+
Sbjct: 121 PSIIIKGYALAAEKAQEILDSIARDVDVEDREILKKAAMTAITGKAAEEEREYLAEIAVE 180
Query: 451 AVMSLDD------LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNP 504
AV + + + L+ I +K GG+++D+ L+ GV K + G K +
Sbjct: 181 AVKQVAEKVGDRYHVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMR---KRVEGA 237
Query: 505 KIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPI 564
KIAL+N LE+K +AEIR+ S E+ Q ++ E K+L E +DKI GA VV + I
Sbjct: 238 KIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGI 297
Query: 565 GDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGS 624
D+A Y A + RV + D+++ KA G ++T DL LG + ++R++
Sbjct: 298 DDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAG 357
Query: 625 E 625
E
Sbjct: 358 E 358
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 95/165 (57%)
Query: 47 PDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 106
P++ Q ++ E K+L E +DKI GA VV + I D+A Y A + RV + D+
Sbjct: 262 PEQLQAFLEQEEKMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDM 321
Query: 107 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAE 166
++ KA G ++T DL LG + ++R++ E GCKN + TI++RGG E
Sbjct: 322 EKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTE 381
Query: 167 QFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
++E ER+L DA+ +V+ + + +VA GGA E+EL+ ++ +Y+
Sbjct: 382 HVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAISVDEYA 426
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 240 KTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVV 299
K + KIAL+N LE+K +AEIR+ S E+ Q ++ E K+L E +DKI GA VV
Sbjct: 232 KRVEGAKIALINEALEVKETETDAEIRITSPEQLQAFLEQEEKMLREMVDKIKEVGANVV 291
Query: 300 LSKLPIGDVATQYFA 314
+ I D+A Y A
Sbjct: 292 FVQKGIDDLAQHYLA 306
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 185/357 (51%), Gaps = 61/357 (17%)
Query: 328 ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATI 387
+L+LKEGT+ + G+ L +NI A + + + ++++LGPRG+DK++VD G T++NDGATI
Sbjct: 8 VLILKEGTQRTYGREALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITVTNDGATI 67
Query: 388 MKLLDIVHPAAKTLVDIAKSQDAEIQKSDSG----------------------------- 418
+K ++I HPAAK LV++AK+QDAE+ +
Sbjct: 68 VKEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGY 127
Query: 419 --------------------EYRGLLEKCAATALSSKLIHQ--QKGFFSKMVVDAVMSLD 456
E +L + A T L+SK + ++ MV+DA+ ++
Sbjct: 128 TKAMEEALRLVDEAAVPVEVEDDSVLRRIAETTLASKFVGTGPERDKIISMVIDAIRTVA 187
Query: 457 DLLP-------LNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALL 509
+ P L+ + I+K GG+L DS LV G+ K + PK +N KI +L
Sbjct: 188 EKRPDGGYEVDLDYVKIEKKKGGSLLDSKLVRGIVLDKEVVHPAM---PKRVENAKILVL 244
Query: 510 NIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVAT 569
+ LE++ +IR+ +E+ + ++ E ++L + ++KI A+GA VV+++ I +VA
Sbjct: 245 DAPLEVQKPELTTKIRVTDIEKLESFLEEETRMLRDMVEKIAATGANVVITQKGIDEVAQ 304
Query: 570 QYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSER 626
+ A + + RV D+++ KA G ++T+ DL LG + +ER++G ++
Sbjct: 305 HFLAKKGILAVRRVKRSDIEKVAKATGAKIVTSLRDLKPEYLGYAELVEERKVGEDK 361
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 100/164 (60%)
Query: 48 DEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLK 107
++ + ++ E ++L + ++KI A+GA VV+++ I +VA + A + + RV D++
Sbjct: 265 EKLESFLEEETRMLRDMVEKIAATGANVVITQKGIDEVAQHFLAKKGILAVRRVKRSDIE 324
Query: 108 RTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQ 167
+ KA G ++T+ DL LG + +ER++G ++ G KN ++ TI++RG +
Sbjct: 325 KVAKATGAKIVTSLRDLKPEYLGYAELVEERKVGEDKMVFIEGAKNPKSVTILLRGANDM 384
Query: 168 FLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
L+E ER++ DA+ +R +R +V GGGA+E+EL+ L++++
Sbjct: 385 LLDEAERNIKDALHGLRNILREPKIVGGGGAVEVELALKLKEFA 428
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KI +L+ LE++ +IR+ +E+ + ++ E ++L + ++KI A+GA V
Sbjct: 233 PKRVENAKILVLDAPLEVQKPELTTKIRVTDIEKLESFLEEETRMLRDMVEKIAATGANV 292
Query: 299 VLSKLPIGDVATQYFADR 316
V+++ I +VA + A +
Sbjct: 293 VITQKGIDEVAQHFLAKK 310
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 180/361 (49%), Gaps = 59/361 (16%)
Query: 320 SQVFRQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKST 379
+Q+ QP +++L EGT+ G+ NI A + V + +RTTLGP+GMDK++VD G
Sbjct: 2 AQLAGQP-VVILPEGTQRYVGRDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIV 60
Query: 380 ISNDGATIMKLLDIVHPAAKTLVDIAKSQDAE---------------------------- 411
I+NDGATI+ +DI HPAAK +V++AK+QD E
Sbjct: 61 ITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIH 120
Query: 412 ---------------------IQKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVD 450
I K S + L+K A T+++ K +++ + +++ V+
Sbjct: 121 PSIIIKGYALAAEKAQEILEGIAKEVSPDDVETLKKAAVTSITGKAAEEEREYLAEIAVE 180
Query: 451 AVMSLDDLL------PLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNP 504
AV + + + L+ I +K G ++ ++ L+ GV K + G PK +N
Sbjct: 181 AVRQVAEKVGDKYKVDLDNIKFEKKEGASVHETQLIRGVVIDKEVVHPGM---PKRVENA 237
Query: 505 KIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPI 564
KIAL+N LE+K +AEIR+ S E+ Q ++ E ++L E +DKI GA VV + I
Sbjct: 238 KIALINDALEVKETETDAEIRITSPEQLQAFLEQEERMLREMVDKIKEVGANVVFVQKGI 297
Query: 565 GDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGS 624
D+A Y A + RV + D+++ KA G ++T DL LG + ++R++
Sbjct: 298 DDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAG 357
Query: 625 E 625
E
Sbjct: 358 E 358
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 93/165 (56%)
Query: 47 PDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 106
P++ Q ++ E ++L E +DKI GA VV + I D+A Y A + RV + D+
Sbjct: 262 PEQLQAFLEQEERMLREMVDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDM 321
Query: 107 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAE 166
++ KA G ++T DL LG + ++R++ E GCKN + TI++RGG E
Sbjct: 322 EKLAKATGAKIVTNVRDLTPEDLGEAELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTE 381
Query: 167 QFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
++E ER+L DA+ +V+ + + ++ GGA E+EL+ L +Y+
Sbjct: 382 HVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAIKLDEYA 426
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KIAL+N LE+K +AEIR+ S E+ Q ++ E ++L E +DKI GA V
Sbjct: 231 PKRVENAKIALINDALEVKETETDAEIRITSPEQLQAFLEQEERMLREMVDKIKEVGANV 290
Query: 299 VLSKLPIGDVATQYFA 314
V + I D+A Y A
Sbjct: 291 VFVQKGIDDLAQHYLA 306
>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
Length = 552
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 193/366 (52%), Gaps = 61/366 (16%)
Query: 319 TSQVFRQPQ---ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQN 375
T+ V P+ +++LKEG+ + GK L NI A +AV +A+++T GPRGMDK++VD
Sbjct: 4 TATVATTPEGIPVIILKEGSSRTYGKEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSL 63
Query: 376 GKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAE---------------IQKSDSGEY 420
G TI+NDGATI+ +D+ HPAAK LV IAK QD E ++K++ Y
Sbjct: 64 GDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLY 123
Query: 421 R----------------------------------GLLEKCAATALSSKLIHQQKGFFSK 446
+ +L+K A T+L+SK + + + +
Sbjct: 124 KEIHPTIIVSGFKKAEEQALKTIEEIAQKVSVNDMDILKKVAMTSLNSKAVAGAREYLAD 183
Query: 447 MVVDAVMSLDDL------LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKT 500
+V AV + +L + L+ I I K GG++ D+ ++ G+ K + G PK
Sbjct: 184 IVAKAVTQVAELRGDRWYVDLDNIQIVKKHGGSINDTQIIYGIVVDKEVVHPGM---PKR 240
Query: 501 YKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLS 560
+N KIALL+ LE++ +AEIR++ + +K ++ E +L EK+DKI A+GA VV+
Sbjct: 241 VENAKIALLDASLEVEKPELDAEIRINDPTQMKKFLEEEENLLKEKVDKIAATGANVVIC 300
Query: 561 KLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDER 620
+ I +VA Y A + + R + DL++ +A GG V++ +L LG A+ +ER
Sbjct: 301 QKGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTPQDLGYAALVEER 360
Query: 621 QIGSER 626
++G ++
Sbjct: 361 KVGEDK 366
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 92/147 (62%)
Query: 65 LDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDL 124
+DKI A+GA VV+ + I +VA Y A + + R + DL++ +A GG V++ +L
Sbjct: 287 VDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDEL 346
Query: 125 NDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVR 184
LG A+ +ER++G ++ G KN + +I++RGG E+ ++ETER+L DA+ V
Sbjct: 347 TPQDLGYAALVEERKVGEDKMVFVEGAKNPKAVSILIRGGLERVVDETERALRDALGTVA 406
Query: 185 RTIRNHAVVAGGGAIEMELSKALRDYS 211
IR+ VAGGGA+E+E++K LR Y+
Sbjct: 407 DVIRDGRAVAGGGAVELEIAKRLRKYA 433
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KIALL+ LE++ +AEIR++ + +K ++ E +L EK+DKI A+GA V
Sbjct: 238 PKRVENAKIALLDASLEVEKPELDAEIRINDPTQMKKFLEEEENLLKEKVDKIAATGANV 297
Query: 299 VLSKLPIGDVATQYFADR 316
V+ + I +VA Y A +
Sbjct: 298 VICQKGIDEVAQHYLAKK 315
>sp|P48425|THSB_THEAC Thermosome subunit beta OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsB PE=1 SV=1
Length = 543
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 182/360 (50%), Gaps = 59/360 (16%)
Query: 325 QPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDG 384
QP I +LKEGT+ GK + NI A A+ ++VR++LGPRGMDK++VD G I+NDG
Sbjct: 5 QP-IFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDG 63
Query: 385 ATIMKLLDIVHPAAKTLVDIAKSQDA---------------------------------- 410
TI+K +D+ HPAAK +V+++K+QD+
Sbjct: 64 VTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVIS 123
Query: 411 ---------------EIQKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL 455
EI + + LL K A T+L+SK K +++ +AV S+
Sbjct: 124 EGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSV 183
Query: 456 DDL------LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALL 509
+L + + I + K GGA++D+ L++G+ K + G P K+ KIALL
Sbjct: 184 AELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGM---PDVVKDAKIALL 240
Query: 510 NIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVAT 569
+ LE+K + +R++ QK + E +L E +DKI + GA VV+++ I D+A
Sbjct: 241 DAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQ 300
Query: 570 QYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTL 629
Y + ++ RV + D+ + KA G ++++T +++ S LGT ++ ++G + T
Sbjct: 301 HYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTF 360
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 82/139 (58%)
Query: 45 EEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEE 104
E+P QK + E +L E +DKI + GA VV+++ I D+A Y + ++ RV +
Sbjct: 258 EDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKS 317
Query: 105 DLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGG 164
D+ + KA G ++++T +++ S LGT ++ ++G + +GCKN + +I+VRG
Sbjct: 318 DMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGE 377
Query: 165 AEQFLEETERSLHDAIMIV 183
E ++E ERS+ D++ +V
Sbjct: 378 TEHVVDEMERSITDSLHVV 396
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
P K+ KIALL+ LE+K + +R++ QK + E +L E +DKI + GA V
Sbjct: 229 PDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANV 288
Query: 299 VLSKLPIGDVATQYFA 314
V+++ I D+A Y +
Sbjct: 289 VITQKGIDDMAQHYLS 304
>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1
Length = 552
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 185/374 (49%), Gaps = 77/374 (20%)
Query: 319 TSQVFRQPQ---ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQN 375
T+ V P+ +++LKEG+ + GK L +NI A +A+ +A+++T GPRGMDK+ VD
Sbjct: 3 TATVATTPEGIPVIILKEGSSRTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSL 62
Query: 376 GKSTISNDGATIMKLLDI------------------------------------------ 393
G TI+NDGATI+ +D+
Sbjct: 63 GDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLY 122
Query: 394 --VHP-------------AAKTLVDIAKSQDAEIQKSDSGEYRGLLEKCAATALSSKLIH 438
+HP A KT+ DIA Q I +D +L K A T+L SK +
Sbjct: 123 KEIHPTIIVSGYKKAEEIALKTIQDIA--QPVSINDTD------VLRKVALTSLGSKAVA 174
Query: 439 QQKGFFSKMVVDAVMSLDDL------LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYA 492
+ + + +VV AV + +L + L+ + I K GG++ D+ LV G+ K +
Sbjct: 175 GAREYLADLVVKAVAQVAELRGDKWYVDLDNVQIVKKHGGSINDTQLVYGIVVDKEVVHP 234
Query: 493 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 552
G PK +N KIALL+ LE++ +AEIR++ + K ++ E IL EK+DKI A
Sbjct: 235 GM---PKRIENAKIALLDASLEVEKPELDAEIRINDPTQMHKFLEEEENILKEKVDKIAA 291
Query: 553 SGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLG 612
+GA VV+ + I +VA Y A + + R + DL++ +A GG V++ +L LG
Sbjct: 292 TGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLG 351
Query: 613 TCAVFDERQIGSER 626
A+ +ER++G ++
Sbjct: 352 YAALVEERKVGEDK 365
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 104/166 (62%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P + K ++ E IL EK+DKI A+GA VV+ + I +VA Y A + + R + D
Sbjct: 267 DPTQMHKFLEEEENILKEKVDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSD 326
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
L++ +A GG V++ +L LG A+ +ER++G ++ G KN ++ +I++RGG
Sbjct: 327 LEKLARATGGRVISNIDELTSQDLGYAALVEERKVGEDKMVFVEGAKNPKSVSILIRGGL 386
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
E+ ++ETER+L DA+ V IR+ VAGGGA+E+E++K LR Y+
Sbjct: 387 ERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYA 432
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KIALL+ LE++ +AEIR++ + K ++ E IL EK+DKI A+GA V
Sbjct: 237 PKRIENAKIALLDASLEVEKPELDAEIRINDPTQMHKFLEEEENILKEKVDKIAATGANV 296
Query: 299 VLSKLPIGDVATQYFADR 316
V+ + I +VA Y A +
Sbjct: 297 VICQKGIDEVAQHYLAKK 314
>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct1 PE=1 SV=1
Length = 560
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 179/358 (50%), Gaps = 55/358 (15%)
Query: 320 SQVFRQPQ-ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKS 378
SQ +Q Q +++L E ++ + G+ NI A +AV +AVRTTLGP+GMDK++VD G+
Sbjct: 2 SQRMQQGQPMIILGEDSQRTSGQDAQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGGQV 61
Query: 379 TISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEIQKS------DSGEY------------ 420
++NDG TI+K +DI HPAA +V+++++Q+ E+ ++GE
Sbjct: 62 VVTNDGVTILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDV 121
Query: 421 -------------------------------RGLLEKCAATALSSKLIHQQKGFFSKMVV 449
R L K AATA++ K K S++VV
Sbjct: 122 HATTIAQGYRQAAEKAKEVLEDNAIEVTEDDRETLTKIAATAMTGKGAESAKDLLSELVV 181
Query: 450 DAVMSL--DDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIA 507
DAV+++ DD + N + I+KV GG +++S LV+GV K E P ++ IA
Sbjct: 182 DAVLAVKDDDGIDTNNVSIEKVVGGTIDNSELVEGVIVDKERVD---ENMPYAVEDANIA 238
Query: 508 LLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDV 567
+L+ LE++ +AE+ + ++ Q+ +D E K L E +D++ GA V I D+
Sbjct: 239 ILDDALEVRETEIDAEVNVTDPDQLQQFLDQEEKQLKEMVDQLVEVGADAVFVGDGIDDM 298
Query: 568 ATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSE 625
A Y A + R DLKR +A GG V+++ D+ LG ++ +G +
Sbjct: 299 AQHYLAKEGILAVRRAKSSDLKRLARATGGRVVSSLDDIEADDLGFAGSVGQKDVGGD 356
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+PD+ Q+ +D E K L E +D++ GA V I D+A Y A + R D
Sbjct: 259 DPDQLQQFLDQEEKQLKEMVDQLVEVGADAVFVGDGIDDMAQHYLAKEGILAVRRAKSSD 318
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
LKR +A GG V+++ D+ LG ++ +G + ++A++ T+I+RGG
Sbjct: 319 LKRLARATGGRVVSSLDDIEADDLGFAGSVGQKDVGGDERIFVEDVEDAKSVTLILRGGT 378
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
E ++E ER++ D++ +VR T+ + V+ GGGA E ELS LR+++
Sbjct: 379 EHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPETELSLQLREFA 424
Score = 39.7 bits (91), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 236 EMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASG 295
E P ++ IA+L+ LE++ +AE+ + ++ Q+ +D E K L E +D++ G
Sbjct: 226 ENMPYAVEDANIAILDDALEVRETEIDAEVNVTDPDQLQQFLDQEEKQLKEMVDQLVEVG 285
Query: 296 AQVVLSKLPIGDVATQYFA 314
A V I D+A Y A
Sbjct: 286 ADAVFVGDGIDDMAQHYLA 304
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 175/351 (49%), Gaps = 53/351 (15%)
Query: 324 RQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISND 383
+QP IL+L EGT G+ NI A + + + VRTTLGP+GMDK++VD G ++ND
Sbjct: 5 QQP-ILVLPEGTSRYLGRDAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVVTND 63
Query: 384 GATIMKLLDIVHPAAKTLVDIAKSQDAEIQKSDS------GEY----------------- 420
G TI+K +DI HPAAK LV++AK+Q+ E+ + GE
Sbjct: 64 GVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHPTII 123
Query: 421 ------------------------RGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL- 455
R L K A TA++ K + + ++++VDAV +
Sbjct: 124 AMGYRQAAEKAQEILDDIAIDASDRDTLMKVAMTAMTGKGTEKAREPLAELIVDAVKQVE 183
Query: 456 -DDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELE 514
D + + I I+K G A++DS LV GV K + G PK +N KIALLN +E
Sbjct: 184 EDGEVEKDHIKIEKKEGAAVDDSTLVQGVIIDKERVHPGM---PKKVENAKIALLNCPIE 240
Query: 515 LKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFAD 574
+K +AEIR+ + Q ++ E +++ + ++ I +GA V+ + I D+A Y A
Sbjct: 241 VKETEVDAEIRITDPSQMQAFIEQEEQMIRDMVNSIVDTGANVLFCQKGIDDLAQHYLAK 300
Query: 575 RDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSE 625
+ RV + D+++ KA G ++T DL+ LG V E++I E
Sbjct: 301 AGVLAVRRVKKSDMEKLSKATGANIVTNIEDLSPEDLGEAGVVSEKKISGE 351
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 11/216 (5%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P + Q ++ E +++ + ++ I +GA V+ + I D+A Y A + RV + D
Sbjct: 254 DPSQMQAFIEQEEQMIRDMVNSIVDTGANVLFCQKGIDDLAQHYLAKAGVLAVRRVKKSD 313
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
+++ KA G ++T DL+ LG V E++I E CK + TI+VRG
Sbjct: 314 MEKLSKATGANIVTNIEDLSPEDLGEAGVVSEKKISGEEMIFVEECKEPKAVTILVRGST 373
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYSGLGDKVRTGHPSDN 225
E + E ER++ DAI +V T+ + VVAGGGA E+E++K L+DY+ D + S
Sbjct: 374 EHVVSEVERAIEDAIGVVAATVEDGKVVAGGGAPEIEIAKRLKDYA---DSI-----SGR 425
Query: 226 SFHAIS--PDGFEMQPKTY-KNPKIALLNIELELKA 258
A+S + E+ PKT +N + +++ ++L+A
Sbjct: 426 EQLAVSAFAEALEIVPKTLAENAGLDSIDVLVDLRA 461
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KIALLN +E+K +AEIR+ + Q ++ E +++ + ++ I +GA V
Sbjct: 224 PKKVENAKIALLNCPIEVKETEVDAEIRITDPSQMQAFIEQEEQMIRDMVNSIVDTGANV 283
Query: 299 VLSKLPIGDVATQYFA 314
+ + I D+A Y A
Sbjct: 284 LFCQKGIDDLAQHYLA 299
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 176/362 (48%), Gaps = 61/362 (16%)
Query: 320 SQVFRQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKST 379
+Q+ QP +++L EGT+ G+ NI A + + + VRTTLGP+GMDK++VD G
Sbjct: 2 AQLSGQP-VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 380 ISNDGATIMKLLDIVHPAAKTLVDIAKSQ--------------------------DAEIQ 413
++NDGATI+ +D+ HPAAK +V++AK+Q D I
Sbjct: 61 VTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIH 120
Query: 414 KS------------------------DSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVV 449
S D + LL K AAT+++ K K +K+ V
Sbjct: 121 PSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLL-KIAATSITGKNAESHKELLAKLAV 179
Query: 450 DAVMSLDD------LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKN 503
+AV + + ++ L+ I +K AG +E+S LV GV K + PK +N
Sbjct: 180 EAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRM---PKRVEN 236
Query: 504 PKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLP 563
KIAL+N LE+K +A+I + S ++ ++ E K+L + +D I +GA VV +
Sbjct: 237 AKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKG 296
Query: 564 IGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIG 623
I D+A Y A + RV + D+++ KA G ++T DL LG V +ER++
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLA 356
Query: 624 SE 625
E
Sbjct: 357 GE 358
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%)
Query: 47 PDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 106
PD+ ++ E K+L + +D I +GA VV + I D+A Y A + RV + D+
Sbjct: 262 PDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDM 321
Query: 107 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAE 166
++ KA G ++T DL LG V +ER++ E GCKN + TI++RGG E
Sbjct: 322 EKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTE 381
Query: 167 QFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
++E ER+L DA+ +V+ + + AV+ GGA E+EL+ L +Y+
Sbjct: 382 HVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYA 426
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KIAL+N LE+K +A+I + S ++ ++ E K+L + +D I +GA V
Sbjct: 231 PKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANV 290
Query: 299 VLSKLPIGDVATQYFA 314
V + I D+A Y A
Sbjct: 291 VFVQKGIDDLAQHYLA 306
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 176/362 (48%), Gaps = 61/362 (16%)
Query: 320 SQVFRQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKST 379
+Q+ QP +++L EGT+ G+ NI A + + + VRTTLGP+GMDK++VD G
Sbjct: 2 AQLSGQP-VVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIV 60
Query: 380 ISNDGATIMKLLDIVHPAAKTLVDIAKSQ--------------------------DAEIQ 413
++NDGATI+ +D+ HPAAK +V++AK+Q D I
Sbjct: 61 VTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIH 120
Query: 414 KS------------------------DSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVV 449
S D + LL K AAT+++ K K +K+ V
Sbjct: 121 PSIIIKGYALAAEKAQEILDEIAIRVDPDDEETLL-KIAATSITGKNAESHKELLAKLAV 179
Query: 450 DAVMSLDD------LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKN 503
+AV + + ++ L+ I +K AG +E+S LV GV K + PK +N
Sbjct: 180 EAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRM---PKRVEN 236
Query: 504 PKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLP 563
KIAL+N LE+K +A+I + S ++ ++ E K+L + +D I +GA VV +
Sbjct: 237 AKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKG 296
Query: 564 IGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIG 623
I D+A Y A + RV + D+++ KA G ++T DL LG V +ER++
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLA 356
Query: 624 SE 625
E
Sbjct: 357 GE 358
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 93/165 (56%)
Query: 47 PDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 106
PD+ ++ E K+L + +D I +GA VV + I D+A Y A + RV + D+
Sbjct: 262 PDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDM 321
Query: 107 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAE 166
++ KA G ++T DL LG V +ER++ E GCKN + TI++RGG E
Sbjct: 322 EKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTE 381
Query: 167 QFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
++E ER+L DA+ +V+ + + AV+ GGA E+EL+ L +Y+
Sbjct: 382 HVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYA 426
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KIAL+N LE+K +A+I + S ++ ++ E K+L + +D I +GA V
Sbjct: 231 PKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANV 290
Query: 299 VLSKLPIGDVATQYFA 314
V + I D+A Y A
Sbjct: 291 VFVQKGIDDLAQHYLA 306
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 174/351 (49%), Gaps = 53/351 (15%)
Query: 324 RQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISND 383
+QP I +L + T G+ NI A + + + VRTTLGP+GMDK++VD G I+ND
Sbjct: 5 QQP-IFILPQDTSRYVGREAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVITND 63
Query: 384 GATIMKLLDIVHPAAKTLVDIAKSQDAEIQKSDS------GEY----------------- 420
G TI++ +DI HPAAK LV++AK+Q+ E+ + GE
Sbjct: 64 GVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHPTII 123
Query: 421 ------------------------RGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL- 455
R L K A TA++ K + K +++VVDAVM +
Sbjct: 124 ALGYRNAALKAQEILEEISMEASDRDTLMKVAITAMTGKGSERAKEKLAELVVDAVMQVE 183
Query: 456 -DDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELE 514
D + + I I+++ G ++ +S +V+G+ K+ A PK + +IALL +E
Sbjct: 184 EDGEIDKDNINIQRIQGASVNESRIVNGIVIDKSRADTSM---PKRIEKARIALLKYPIE 240
Query: 515 LKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFAD 574
+K +A+IRL + Q ++ E +++ + ++KI +SGA VV + I D+A Y +
Sbjct: 241 VKDLETDAKIRLTDPSQMQAFIEQEEQMIRDMVEKIKSSGANVVFCQKGIDDLALHYLSR 300
Query: 575 RDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSE 625
+ RV + D+KR KA G ++T DL LG V E++I E
Sbjct: 301 EGIMALKRVKKSDIKRIEKATGARLVTNIDDLTAEDLGEAGVIYEKKIFDE 351
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 116/214 (54%), Gaps = 7/214 (3%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P + Q ++ E +++ + ++KI +SGA VV + I D+A Y + + RV + D
Sbjct: 254 DPSQMQAFIEQEEQMIRDMVEKIKSSGANVVFCQKGIDDLALHYLSREGIMALKRVKKSD 313
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
+KR KA G ++T DL LG V E++I E C++ + +II+RG
Sbjct: 314 IKRIEKATGARLVTNIDDLTAEDLGEAGVIYEKKIFDEVLTFIEECRDPKAISIILRGST 373
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYSGLGDKVRTGHPSDN 225
+ EE ER+L DAI +V T+ + VVAGGGA E+E+++ LR+Y+ D +
Sbjct: 374 KHVAEEMERALEDAIGVVASTLEDREVVAGGGAPEVEIARKLREYA---DTISGREQLAV 430
Query: 226 SFHAISPDGFEMQPKTY-KNPKIALLNIELELKA 258
S A D E+ PKT +N + +++ ++L+A
Sbjct: 431 SAFA---DALEIVPKTLAENAGLDSIDVLVDLRA 461
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK + +IALL +E+K +A+IRL + Q ++ E +++ + ++KI +SGA V
Sbjct: 224 PKRIEKARIALLKYPIEVKDLETDAKIRLTDPSQMQAFIEQEEQMIRDMVEKIKSSGANV 283
Query: 299 VLSKLPIGDVATQYFA 314
V + I D+A Y +
Sbjct: 284 VFCQKGIDDLALHYLS 299
>sp|Q9HN70|THSA_HALSA Thermosome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=thsA PE=3 SV=2
Length = 562
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 177/356 (49%), Gaps = 55/356 (15%)
Query: 321 QVFRQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTI 380
Q+ QP +++L E ++ + G+ NI A +AV ++VRTTLGP+GMDK++VD +G+ +
Sbjct: 4 QMGNQP-LIVLSEDSQRTSGEDAQSMNITAGKAVAESVRTTLGPKGMDKMLVDSSGEVVV 62
Query: 381 SNDGATIMKLLDIVHPAAKTLVDIAKSQDAEIQKSD------SGE--------------- 419
+NDG TI+K +DI HPAA +V++A++Q+ E+ SGE
Sbjct: 63 TNDGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHA 122
Query: 420 ------YRG----------------------LLEKCAATALSSKLIHQQKGFFSKMVVDA 451
YR LEK AATA++ K KG S +VV A
Sbjct: 123 TTLAQGYRQAAEKAKELLDDAAIDVSADDTETLEKIAATAMTGKGAENAKGVLSDLVVRA 182
Query: 452 VMSL--DDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALL 509
V S+ D+ + + + ++KV GGA+E+S L++GV K E P ++ IAL+
Sbjct: 183 VQSVADDNDVDTDNVKVEKVTGGAIENSELIEGVIVDKERVS---ENMPYAVEDANIALV 239
Query: 510 NIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVAT 569
+ LE++ + E+ + ++ Q +D E + L E +D + +GA VV + I D+A
Sbjct: 240 DDGLEVQETEIDTEVNVTDPDQLQNFLDQEEEQLKEMVDALKDAGANVVFADSGIDDMAQ 299
Query: 570 QYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSE 625
Y A + R +D R +A G ++ +D+ + LG ++ IG +
Sbjct: 300 HYLAKEGILAVRRAKSDDFTRLSRATGATPVSNVNDIEAADLGAAGSVAQKDIGGD 355
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 127/247 (51%), Gaps = 13/247 (5%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+PD+ Q +D E + L E +D + +GA VV + I D+A Y A + R +D
Sbjct: 258 DPDQLQNFLDQEEEQLKEMVDALKDAGANVVFADSGIDDMAQHYLAKEGILAVRRAKSDD 317
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
R +A G ++ +D+ + LG ++ IG + + A++ T+I+RGG
Sbjct: 318 FTRLSRATGATPVSNVNDIEAADLGAAGSVAQKDIGGDERIFVEDVEEAKSVTLILRGGT 377
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYSGLGDKVRTGHPSDN 225
E ++E ER++ D++ +VR T+ + V+ GGGA E EL+ LRD++ D V G
Sbjct: 378 EHVVDEVERAIEDSLGVVRVTLEDGQVMPGGGAPETELAMQLRDFA---DSV--GGREQL 432
Query: 226 SFHAISPDGFEMQPKTY-KNPKIALLNIELELKAERD--NAEIRLDSVEEYQ-KVVDAEW 281
+ A + D E+ P+T +N ++ ++L+++ D + E LD+ Y V+D E
Sbjct: 433 AVEAFA-DALEVIPRTLAENAGHDPIDSLVDLRSQHDGGDTEAGLDA---YNGDVIDMES 488
Query: 282 KILYEKL 288
+ + E L
Sbjct: 489 EGIVEPL 495
Score = 39.7 bits (91), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 236 EMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASG 295
E P ++ IAL++ LE++ + E+ + ++ Q +D E + L E +D + +G
Sbjct: 225 ENMPYAVEDANIALVDDGLEVQETEIDTEVNVTDPDQLQNFLDQEEEQLKEMVDALKDAG 284
Query: 296 AQVVLSKLPIGDVATQYFA 314
A VV + I D+A Y A
Sbjct: 285 ANVVFADSGIDDMAQHYLA 303
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 174/353 (49%), Gaps = 56/353 (15%)
Query: 325 QPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDG 384
QP +++L E + G+ NI A + + + VR+TLGP+GMDK++VD G ++NDG
Sbjct: 5 QP-VVVLPENVKRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDG 63
Query: 385 ATIMKLLDIVHPAAKTLVDIAKSQDAEIQKSDS------GEY------------------ 420
TI+K + + HPAAK L+++AK+Q+ E+ + GE
Sbjct: 64 VTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVI 123
Query: 421 -------------------------RGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL 455
+ +L K A T+++ K + K +M+V+AV ++
Sbjct: 124 KGYQLAVQKAQEVLKEIAMDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTAV 183
Query: 456 DD---LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIE 512
D + ++I I+K G +++++ L++GV K PK +N KIALLN
Sbjct: 184 VDESGKVDKDLIKIEKKEGASVDETELINGVLIDKERVSPQM---PKKIENAKIALLNCP 240
Query: 513 LELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYF 572
+E+K +AEIR+ + + ++ E K+L + +D I ASGA V+ + I D+A Y
Sbjct: 241 IEVKETETDAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKGIDDLAQHYL 300
Query: 573 ADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSE 625
A + RV + D+++ KA G V+T DL LG + +ER+I +
Sbjct: 301 AKEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAGD 353
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P + + ++ E K+L + +D I ASGA V+ + I D+A Y A + RV + D
Sbjct: 256 DPTKLMEFIEQEEKMLKDMVDTIKASGANVLFCQKGIDDLAQHYLAKEGILAVRRVKKSD 315
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
+++ KA G V+T DL LG + +ER+I + CK+ + T+++RG
Sbjct: 316 MEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAGDAMIFVEECKHPKAVTMLIRGTT 375
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
E +EE R++ DAI +V TI + +VAGGGA E+EL+ LRDY+
Sbjct: 376 EHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRDYA 421
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KIALLN +E+K +AEIR+ + + ++ E K+L + +D I ASGA V
Sbjct: 226 PKKIENAKIALLNCPIEVKETETDAEIRITDPTKLMEFIEQEEKMLKDMVDTIKASGANV 285
Query: 299 VLSKLPIGDVATQYFA 314
+ + I D+A Y A
Sbjct: 286 LFCQKGIDDLAQHYLA 301
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 173/351 (49%), Gaps = 56/351 (15%)
Query: 328 ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATI 387
I++L + + G+ NI A + + + VRTTLGP+GMDK++VD+ G ++NDG TI
Sbjct: 8 IVVLPQNVKRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTI 67
Query: 388 MKLLDIVHPAAKTLVDIAKSQDAE------------------------------------ 411
+K + + HPAAK L+++AK+Q+ E
Sbjct: 68 LKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGY 127
Query: 412 -------------IQKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDD- 457
I K E +L+K A T+++ K + + +++VV+AV ++ D
Sbjct: 128 EMARNKAVEELKSIAKEVKPEDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRAVVDE 187
Query: 458 ---LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELE 514
+ ++I ++K G +E++ L+ GV K PK +N KIALLN +E
Sbjct: 188 ETGKVDKDLIKVEKKEGAPIEETKLIRGVVIDKERVNPQM---PKKVENAKIALLNCPIE 244
Query: 515 LKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFAD 574
+K +AEIR+ + + ++ E K++ + ++KI A+GA VV + I D+A Y A
Sbjct: 245 VKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAK 304
Query: 575 RDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSE 625
+ + RV + D+++ KA G ++T DL LG + +ER++ +
Sbjct: 305 KGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVAGD 355
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 94/166 (56%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P + + ++ E K++ + ++KI A+GA VV + I D+A Y A + + RV + D
Sbjct: 258 DPAKLMEFIEQEEKMIKDMVEKIAATGANVVFCQKGIDDLAQHYLAKKGILAVRRVKKSD 317
Query: 106 LKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGA 165
+++ KA G ++T DL LG + +ER++ + CK+ + TI+ RG
Sbjct: 318 MEKLAKATGARIVTKIDDLTPEDLGEAGLVEERKVAGDAMIFVEQCKHPKAVTILARGST 377
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
E +EE R++ DAI +V+ + +VAGGGA E+EL+K LR ++
Sbjct: 378 EHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFA 423
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK +N KIALLN +E+K +AEIR+ + + ++ E K++ + ++KI A+GA V
Sbjct: 228 PKKVENAKIALLNCPIEVKETETDAEIRITDPAKLMEFIEQEEKMIKDMVEKIAATGANV 287
Query: 299 VLSKLPIGDVATQYFADR 316
V + I D+A Y A +
Sbjct: 288 VFCQKGIDDLAQHYLAKK 305
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 177/364 (48%), Gaps = 68/364 (18%)
Query: 328 ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATI 387
+LL KEGT S G+ L +NI A + + ++++LGPRG+DK+++D G TI+NDGATI
Sbjct: 5 VLLFKEGTSRSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATI 64
Query: 388 MKLLDI--------------------------------------------VHP------- 396
+K ++I VHP
Sbjct: 65 VKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGY 124
Query: 397 --AAKTLVDIAKSQDAEIQKSD--SGEYRGLLEKCAATALSSKLIHQQKGFFSK---MVV 449
A ++I +I +D S + L+K +T +SSK I K +V+
Sbjct: 125 KKALTKALEIIDQLSLKIDVNDLSSPTAKAQLKKIVSTTMSSKFIAGGAEEIDKIIDLVI 184
Query: 450 DAVMSLDDL-------LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYK 502
DA+ + + +PL++I I K GG++EDS+LV G+ K +AG P+ +
Sbjct: 185 DAITIVAEKRPDGTYNVPLDLIKIDKKKGGSIEDSILVHGLVLDKEVVHAGM---PRRVE 241
Query: 503 NPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKL 562
KIA+L+ LE++ +A+I + S E+ + +D E + L E +DK+ + GA VV+ +
Sbjct: 242 KAKIAVLDAALEVEKPEISAKISITSPEQIKSFLDEEARYLKEMVDKLASIGANVVICQK 301
Query: 563 PIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQI 622
I DVA + A + + RV D+++ KA G ++++ D LG + +ER+I
Sbjct: 302 GIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRI 361
Query: 623 GSER 626
G+++
Sbjct: 362 GNDK 365
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 96/165 (58%)
Query: 47 PDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 106
P++ + +D E + L E +DK+ + GA VV+ + I DVA + A + + RV D+
Sbjct: 268 PEQIKSFLDEEARYLKEMVDKLASIGANVVICQKGIDDVAQHFLAKKGILAVRRVKRSDI 327
Query: 107 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAE 166
++ KA G ++++ D LG + +ER+IG+++ G KN R I++RG +
Sbjct: 328 EKLEKALGARIISSIKDATPEDLGYAELVEERRIGNDKMVFIEGAKNPRAVNILLRGSND 387
Query: 167 QFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
L+E ERSL+DA+ +R + +VAGGGA+E EL+ LR+Y+
Sbjct: 388 MALDEAERSLNDALHSLRNVLMKPMIVAGGGAVESELALRLREYA 432
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
P+ + KIA+L+ LE++ +A+I + S E+ + +D E + L E +DK+ + GA V
Sbjct: 237 PRRVEKAKIAVLDAALEVEKPEISAKISITSPEQIKSFLDEEARYLKEMVDKLASIGANV 296
Query: 299 VLSKLPIGDVATQYFADR 316
V+ + I DVA + A +
Sbjct: 297 VICQKGIDDVAQHFLAKK 314
>sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1
PE=2 SV=1
Length = 545
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 161/335 (48%), Gaps = 65/335 (19%)
Query: 347 NINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAK 406
N+ ACQAV + V+T+LGP G+DK++VD G TI+NDGATI+++L++ HPAAK LV++A+
Sbjct: 24 NVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAE 83
Query: 407 SQDAEI----------------QKSD------------SGEYRGLLEKC----------- 427
QD E+ + +D SG + E C
Sbjct: 84 LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKV 143
Query: 428 -----------AATALSSKLIHQQKGFFSKMVVDAVMSL-------DDLLPLNMIGIKKV 469
A T++SSKLI FF+ +VV+AV+S+ + P+ I I K
Sbjct: 144 EKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSVKMTNQRGEIKYPIKGINILKA 203
Query: 470 AGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSV 529
G + DS L++G + A G P KIA L+ L+ + ++ ++
Sbjct: 204 HGQSARDSYLLNGYALNTGRAAQGM---PLRVSPAKIACLDFNLQKTKMQLGVQVVVNDP 260
Query: 530 EEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLK 589
E +K+ E + E+++K+ +GA V+L+ I D+A +YF + RV +ED++
Sbjct: 261 RELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKEDMR 320
Query: 590 RTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGS 624
KA G ++TT D+ FD +GS
Sbjct: 321 HVAKATGATLVTTFADMEGE-----ETFDPAHLGS 350
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 6/165 (3%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P E +K+ E + E+++K+ +GA V+L+ I D+A +YF + RV +ED
Sbjct: 259 DPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRVRKED 318
Query: 106 LKRTMKACGGAVMTTAHDL------NDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTI 159
++ KA G ++TT D+ + + LG+ E +I + + G K + ++
Sbjct: 319 MRHVAKATGATLVTTFADMEGEETFDPAHLGSADEVVEERIADDDVILIKGTKTSSAVSL 378
Query: 160 IVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELS 204
I+RG + L+E ER+LHDA+ IV+RT+ ++ VVAGGGA+E LS
Sbjct: 379 ILRGANDYMLDEMERALHDALCIVKRTLESNTVVAGGGAVESALS 423
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
P KIA L+ L+ + ++ ++ E +K+ E + E+++K+ +GA V
Sbjct: 229 PLRVSPAKIACLDFNLQKTKMQLGVQVVVNDPRELEKIRQREADMTKERIEKLLKAGANV 288
Query: 299 VLSKLPIGDVATQYFAD 315
+L+ I D+A +YF +
Sbjct: 289 ILTTKGIDDMALKYFVE 305
>sp|Q94757|TCPA_SCHMA T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A
PE=2 SV=1
Length = 545
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 166/352 (47%), Gaps = 65/352 (18%)
Query: 330 LLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMK 389
+L G E + G+ N+ A + + V+T+LGP G+DK++VD G TI+NDGATI+K
Sbjct: 1 MLTLGGERTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILK 60
Query: 390 LLDIVHPAAKTLVDIAKSQDAEI---------------QKSD-------------SGEYR 421
LLD+ HPAAK LV +A+ QD E+ + +D +G
Sbjct: 61 LLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRL 120
Query: 422 GLLEKC----------------------AATALSSKLIHQQKGFFSKMVVDAVMSLD--- 456
E C A TA+SSKLI+ FS+M VDA+M+++
Sbjct: 121 ACREACKYIQEHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVSG 180
Query: 457 ----DLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIE 512
+ P+ + I K G ++ +S+L+DG + T A + P+ K KIA L+
Sbjct: 181 GPKGPVYPIKAVNILKAHGRSMSESMLIDGYALNCT---AASQQMPRIIKKAKIAFLDFS 237
Query: 513 LELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYF 572
L+ + ++ + + + + E I E++ KI +GA V+L+ I D+ +YF
Sbjct: 238 LQKVKMKLGVQVVVKDPAQLEAIRQREADITKERIQKILNAGANVILTTGGIDDLCMKYF 297
Query: 573 ADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGS 624
+ + R + DLK KA GG ++ + D+ VFD ++G+
Sbjct: 298 VEVNAMAVRRCKKVDLKNMAKATGGQLIVSLADMEGD-----EVFDPTKLGN 344
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 45 EEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEE 104
++P + + + E I E++ KI +GA V+L+ I D+ +YF + + R +
Sbjct: 252 KDPAQLEAIRQREADITKERIQKILNAGANVILTTGGIDDLCMKYFVEVNAMAVRRCKKV 311
Query: 105 DLKRTMKACGGAVMTTAHDL-NDSV-----LGTCAVFDERQIGSERFNVFSGCKNARTCT 158
DLK KA GG ++ + D+ D V LG + +I + + G K + +
Sbjct: 312 DLKNMAKATGGQLIVSLADMEGDEVFDPTKLGNAEEVSQERICDDELIILRGPKVHPSAS 371
Query: 159 IIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
II+RG + +++E ERSLHDA+++V+R + + +V G GA E +S L +Y+
Sbjct: 372 IILRGANDFYVDEMERSLHDALLVVKRVLESKRIVPGAGACETAVSIYLENYA 424
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%)
Query: 236 EMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASG 295
+ P+ K KIA L+ L+ + ++ + + + + E I E++ KI +G
Sbjct: 220 QQMPRIIKKAKIAFLDFSLQKVKMKLGVQVVVKDPAQLEAIRQREADITKERIQKILNAG 279
Query: 296 AQVVLSKLPIGDVATQYFAD 315
A V+L+ I D+ +YF +
Sbjct: 280 ANVILTTGGIDDLCMKYFVE 299
>sp|Q9XT06|TCPA_MONDO T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1
PE=2 SV=1
Length = 557
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 156/328 (47%), Gaps = 60/328 (18%)
Query: 336 ENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVH 395
E + G+ N+ A ++ + V+++LGP G+DK++VD G TI+NDGATI+KLL++ H
Sbjct: 10 ERTTGESIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 396 PAAKTLVDIAKSQDAEI-----------------------QK----SDSGEYR------- 421
PAAK L ++A QD E+ QK S G YR
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAV 129
Query: 422 ----------------GLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL-------DDL 458
L A T++SSK+I FF+ MVVDAV+++
Sbjct: 130 RYINENLIINTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAVKYTDVKGQPR 189
Query: 459 LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAE 518
P+N I + K G + ++S+L++G + A G PK N KIA L+ L+
Sbjct: 190 YPVNSINVLKAHGRSQKESMLINGYALNCVVASQGM---PKRIVNAKIACLDFSLQKTKM 246
Query: 519 RDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMF 578
+ ++ + E+ ++ E I E++ KI A+GA V+L+ I D+ +YF +
Sbjct: 247 KLGVQVVITDPEKLDQIRKREADITKERIQKILATGANVILTTGGIDDMCLKYFVESMTI 306
Query: 579 CAGRVPEEDLKRTMKACGGAVMTTAHDL 606
RV + DLKR KA G +++T L
Sbjct: 307 AVRRVLKRDLKRIAKASGATILSTLASL 334
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P++ ++ E I E++ KI A+GA V+L+ I D+ +YF + RV + D
Sbjct: 256 DPEKLDQIRKREADITKERIQKILATGANVILTTGGIDDMCLKYFVESMTIAVRRVLKRD 315
Query: 106 LKRTMKACGGAVMTTAHDLND------SVLGTCAVFDERQIGSERFNVFSGCKNARTCTI 159
LKR KA G +++T L S+LG + +I + + K + +I
Sbjct: 316 LKRIAKASGATILSTLASLEGEESFEASMLGQAEEVVQERICDDELILIKNTKARTSASI 375
Query: 160 IVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
I+RG + +E ERSLHDA+ +V+R + + +VV GGGA+E LS L +Y+
Sbjct: 376 ILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYA 427
Score = 39.7 bits (91), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 239 PKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 298
PK N KIA L+ L+ + ++ + E+ ++ E I E++ KI A+GA V
Sbjct: 226 PKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRKREADITKERIQKILATGANV 285
Query: 299 VLSKLPIGDVATQYFAD 315
+L+ I D+ +YF +
Sbjct: 286 ILTTGGIDDMCLKYFVE 302
>sp|P18279|TCPA_CRIGR T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1
PE=2 SV=1
Length = 556
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 161/328 (49%), Gaps = 60/328 (18%)
Query: 336 ENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVH 395
+ S G+ N+ A ++ + V+++LGP G+DK++VD G TI+NDGATI+KLL++ H
Sbjct: 10 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 396 PAAKTLVDIAKSQD--------------AEIQKS-----------------------DSG 418
PAAK L ++A QD AE+ K+ ++
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAV 129
Query: 419 EY-------------RGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL--DDL----- 458
Y R L A T++SSK+I FF+ MVVDAV+++ DL
Sbjct: 130 RYISENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDLRGQPR 189
Query: 459 LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAE 518
P+N + I K G + +S+L++G + G + PK N KIA L+ L+
Sbjct: 190 YPVNSVNILKAHGRSQVESMLINGYALN---CVVGSQGMPKRIVNAKIACLDFSLQKTKM 246
Query: 519 RDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMF 578
+ ++ + E+ ++ E I E+++KI A+GA V+L+ I D+ +YF +
Sbjct: 247 KLGVQVVITDPEKLDQIRQRESDITKERIEKILATGANVILTTGGIDDMCLKYFVEAGAM 306
Query: 579 CAGRVPEEDLKRTMKACGGAVMTTAHDL 606
RV + DLKR KA G ++++T +L
Sbjct: 307 AVRRVLKRDLKRIAKASGASILSTLANL 334
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 95/172 (55%), Gaps = 6/172 (3%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P++ ++ E I E+++KI A+GA V+L+ I D+ +YF + RV + D
Sbjct: 256 DPEKLDQIRQRESDITKERIEKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRD 315
Query: 106 LKRTMKACGGAVMTTAHDLND------SVLGTCAVFDERQIGSERFNVFSGCKNARTCTI 159
LKR KA G ++++T +L ++LG + +I + + K + +I
Sbjct: 316 LKRIAKASGASILSTLANLEGEETFEATMLGQAEEVVQERICDDELILIKNTKARTSASI 375
Query: 160 IVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
I+RG + +E ERSLHDA+ +V+R + + +VV GGGA+E LS L +Y+
Sbjct: 376 ILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYA 427
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
G + PK N KIA L+ L+ + ++ + E+ ++ E I E+++KI A
Sbjct: 221 GSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIEKILA 280
Query: 294 SGAQVVLSKLPIGDVATQYFAD 315
+GA V+L+ I D+ +YF +
Sbjct: 281 TGANVILTTGGIDDMCLKYFVE 302
>sp|Q55BM4|TCPA_DICDI T-complex protein 1 subunit alpha OS=Dictyostelium discoideum
GN=tcp1 PE=2 SV=1
Length = 548
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 60/317 (18%)
Query: 347 NINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAK 406
N+ A A+ + V+T+ GP G+DK+++D G ++NDGATI++ +DI HPAAK LV +++
Sbjct: 22 NVLAVTAIANIVKTSFGPIGLDKMLIDNIGSIVVTNDGATILQKIDIEHPAAKILVQLSE 81
Query: 407 SQD--------------AEIQK-----------------------SDSGEY--------- 420
QD AE+ K +++ +Y
Sbjct: 82 LQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIISGFRLACTEAIKYINETLAVKV 141
Query: 421 ----RGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDDL-------LPLNMIGIKKV 469
+ + A T++SSK I+ FFSK+V++A+ + + P+N I I K
Sbjct: 142 ETLPKDFIVNIAKTSMSSKTINDDSDFFSKIVIEAITRVKTIDYKGDVKYPINAINILKA 201
Query: 470 AGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSV 529
G + ++S LV+G + T A G PK + KIA L+ L + ++ + +V
Sbjct: 202 HGKSAKESTLVEGYALNCTVASEGM---PKRIQGAKIAFLDFNLAKTKMKLGQKVVVTNV 258
Query: 530 EEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLK 589
+ + + D E I+ E++ I SGA VVL+ I D+ +YF + R +EDLK
Sbjct: 259 NDLEAIRDRENDIVKERISLIIKSGANVVLTTKGIDDLCLKYFVEAGCMAVRRCKKEDLK 318
Query: 590 RTMKACGGAVMTTAHDL 606
R K+CGG V+ T +L
Sbjct: 319 RIAKSCGGTVLITLANL 335
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 5/162 (3%)
Query: 48 DEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLK 107
++ + + D E I+ E++ I SGA VVL+ I D+ +YF + R +EDLK
Sbjct: 259 NDLEAIRDRENDIVKERISLIIKSGANVVLTTKGIDDLCLKYFVEAGCMAVRRCKKEDLK 318
Query: 108 RTMKACGGAVMTTAHDL-NDSVLGTCAVFDERQIGSERFN----VFSGCKNARTCTIIVR 162
R K+CGG V+ T +L + T A+ ++ +R + N ++ +II+R
Sbjct: 319 RIAKSCGGTVLITLANLEGEESFDTTALGIADEVVQDRLADDELIIVKNSNKKSASIILR 378
Query: 163 GGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELS 204
G E L+E ERS+HD++ IV+RT+ + +V GGGA+E LS
Sbjct: 379 GANELMLDEMERSIHDSLCIVKRTLESGTIVPGGGAVESALS 420
Score = 39.3 bits (90), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 236 EMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASG 295
E PK + KIA L+ L + ++ + +V + + + D E I+ E++ I SG
Sbjct: 224 EGMPKRIQGAKIAFLDFNLAKTKMKLGQKVVVTNVNDLEAIRDRENDIVKERISLIIKSG 283
Query: 296 AQVVLSKLPIGDVATQYFAD 315
A VVL+ I D+ +YF +
Sbjct: 284 ANVVLTTKGIDDLCLKYFVE 303
>sp|Q9W790|TCPA_PALPA T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus
GN=TCP1 PE=2 SV=1
Length = 559
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 153/328 (46%), Gaps = 60/328 (18%)
Query: 336 ENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVH 395
E S G N+ A + + V+++LGP G+DK++VD G TI+NDGATI+KLL++ H
Sbjct: 13 ERSSGDTVRNQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 72
Query: 396 PAAKTLVDIAKSQDAEI---------------QKSDS------------GEYR------- 421
PAAK L ++A+ QD E+ + SD G YR
Sbjct: 73 PAAKVLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIHPTSIIGGYRLACKEAV 132
Query: 422 ----------------GLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL-------DDL 458
L A T++SSK+I FF+ MVVDA ++
Sbjct: 133 RYINENLIINTDELGRDCLINSAKTSMSSKIIGIDGDFFASMVVDAASAVKYTDQKGQAR 192
Query: 459 LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAE 518
P+N I + K G + ++S+LV+G + G + K N KIA L+ L+
Sbjct: 193 YPINSINVLKAHGRSQKESILVNGYALN---CVVGSQGMTKRIVNAKIACLDFSLQKTKM 249
Query: 519 RDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMF 578
+ ++ + E+ ++ E I E++ KI A+GA V+L+ I D+ +YF D
Sbjct: 250 KLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVDAGAM 309
Query: 579 CAGRVPEEDLKRTMKACGGAVMTTAHDL 606
RV ++DLKR KA G V +T +L
Sbjct: 310 AVRRVLKKDLKRIAKASGATVCSTLANL 337
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P++ ++ E I E++ KI A+GA V+L+ I D+ +YF D RV ++D
Sbjct: 259 DPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVDAGAMAVRRVLKKD 318
Query: 106 LKRTMKACGGAVMTTAHDLND------SVLGTCAVFDERQIGSERFNVFSGCKNARTCTI 159
LKR KA G V +T +L S+LG + ++ + + K + +I
Sbjct: 319 LKRIAKASGATVCSTLANLEGEESFEASMLGQAEEVVQERVCDDELILIKNTKARTSASI 378
Query: 160 IVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
I+RG + +E ERS+HDA+ +V+R + + +VV GGGA+E LS L +Y+
Sbjct: 379 ILRGANDFMCDEMERSIHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYA 430
Score = 39.3 bits (90), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
G + K N KIA L+ L+ + ++ + E+ ++ E I E++ KI A
Sbjct: 224 GSQGMTKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILA 283
Query: 294 SGAQVVLSKLPIGDVATQYFAD 315
+GA V+L+ I D+ +YF D
Sbjct: 284 TGANVILTTGGIDDMCLKYFVD 305
>sp|P17987|TCPA_HUMAN T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1
Length = 556
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 158/328 (48%), Gaps = 60/328 (18%)
Query: 336 ENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVH 395
+ S G+ N+ A ++ + V+++LGP G+DK++VD G TI+NDGATI+KLL++ H
Sbjct: 10 DRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 396 PAAKTLVDIAKSQD--------------AEIQKS-----------------------DSG 418
PAAK L ++A QD AE+ K+ ++
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAV 129
Query: 419 EY-------------RGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL--DDL----- 458
Y R L A T++SSK+I FF+ MVVDAV+++ D+
Sbjct: 130 RYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPR 189
Query: 459 LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAE 518
P+N + I K G + +S+L+ G + G + PK N KIA L+ L+
Sbjct: 190 YPVNSVNILKAHGRSQMESMLISGYALN---CVVGSQGMPKRIVNAKIACLDFSLQKTKM 246
Query: 519 RDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMF 578
+ ++ + E+ ++ E I E++ KI A+GA V+L+ I D+ +YF +
Sbjct: 247 KLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAM 306
Query: 579 CAGRVPEEDLKRTMKACGGAVMTTAHDL 606
RV + DLKR KA G +++T +L
Sbjct: 307 AVRRVLKRDLKRIAKASGATILSTLANL 334
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P++ ++ E I E++ KI A+GA V+L+ I D+ +YF + RV + D
Sbjct: 256 DPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRD 315
Query: 106 LKRTMKACGGAVMTTAHDLND------SVLGTCAVFDERQIGSERFNVFSGCKNARTCTI 159
LKR KA G +++T +L ++LG + +I + + K + +I
Sbjct: 316 LKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASI 375
Query: 160 IVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
I+RG + +E ERSLHDA+ +V+R + + +VV GGGA+E LS L +Y+
Sbjct: 376 ILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYA 427
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
G + PK N KIA L+ L+ + ++ + E+ ++ E I E++ KI A
Sbjct: 221 GSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILA 280
Query: 294 SGAQVVLSKLPIGDVATQYFAD 315
+GA V+L+ I D+ +YF +
Sbjct: 281 TGANVILTTGGIDDMCLKYFVE 302
>sp|Q32L40|TCPA_BOVIN T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=1 SV=1
Length = 556
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 159/328 (48%), Gaps = 60/328 (18%)
Query: 336 ENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVH 395
+ S G+ N+ A ++ + V+++LGP G+DK++VD G TI+NDGATI+KLL++ H
Sbjct: 10 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 396 PAAKTLVDIAKSQD--------------AEIQKS-----------------------DSG 418
PAAK L ++A QD AE+ K+ ++
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAV 129
Query: 419 EY-------------RGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL--DDL----- 458
Y R L A T++SSK+I FF+ +VVDAV+++ D+
Sbjct: 130 RYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPR 189
Query: 459 LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAE 518
P+N I + K G + +S+L++G + G + PK N KIA L+ L+
Sbjct: 190 YPVNSINVLKAHGRSQMESMLINGYALN---CVVGSQGMPKRIVNAKIACLDFSLQKTKM 246
Query: 519 RDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMF 578
+ ++ + E+ ++ E I E++ KI A+GA V+L+ I D+ +YF +
Sbjct: 247 KLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAM 306
Query: 579 CAGRVPEEDLKRTMKACGGAVMTTAHDL 606
RV + DLKR KA G V++T +L
Sbjct: 307 AVRRVLKRDLKRIAKASGATVLSTLANL 334
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P++ ++ E I E++ KI A+GA V+L+ I D+ +YF + RV + D
Sbjct: 256 DPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRD 315
Query: 106 LKRTMKACGGAVMTTAHDLND------SVLGTCAVFDERQIGSERFNVFSGCKNARTCTI 159
LKR KA G V++T +L S+LG + +I + + K + ++
Sbjct: 316 LKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASV 375
Query: 160 IVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
I+RG + +E ERSLHDA+ +V+R + + +VV GGGA+E LS L +Y+
Sbjct: 376 ILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYA 427
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
G + PK N KIA L+ L+ + ++ + E+ ++ E I E++ KI A
Sbjct: 221 GSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILA 280
Query: 294 SGAQVVLSKLPIGDVATQYFAD 315
+GA V+L+ I D+ +YF +
Sbjct: 281 TGANVILTTGGIDDMCLKYFVE 302
>sp|Q4R5G2|TCPA_MACFA T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1
PE=2 SV=1
Length = 556
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 155/328 (47%), Gaps = 60/328 (18%)
Query: 336 ENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVH 395
+ S G+ N+ A ++ + V+++LGP G+DK++VD G TI+NDGATI+KLL++ H
Sbjct: 10 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 396 PAAKTLVDIAKSQD--------------AEIQKS-----------------------DSG 418
PAAK L ++A QD AE+ K+ ++
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACKEAV 129
Query: 419 EY-------------RGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL-------DDL 458
Y R L A T++SSK+I FF+ MVVDAV+++
Sbjct: 130 RYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDTRGQPR 189
Query: 459 LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAE 518
P+N + I K G + +S L+ G + G + PK N KIA L+ L+
Sbjct: 190 YPVNSVNILKAHGRSQMESKLISGYALN---CVVGSQGMPKRIVNAKIACLDFSLQKTKM 246
Query: 519 RDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMF 578
+ ++ + E+ ++ E I E++ KI A+GA V+L+ I D+ +YF +
Sbjct: 247 KLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAM 306
Query: 579 CAGRVPEEDLKRTMKACGGAVMTTAHDL 606
RV + DLKR KA G +++T +L
Sbjct: 307 AVRRVLKRDLKRIAKASGATILSTLANL 334
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P++ ++ E I E++ KI A+GA V+L+ I D+ +YF + RV + D
Sbjct: 256 DPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRD 315
Query: 106 LKRTMKACGGAVMTTAHDLND------SVLGTCAVFDERQIGSERFNVFSGCKNARTCTI 159
LKR KA G +++T +L ++LG + +I + + K + +I
Sbjct: 316 LKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASI 375
Query: 160 IVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
I+RG + +E ERSLHDA+ +V+R + + +VV GGGA+E LS L +Y+
Sbjct: 376 ILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYA 427
Score = 40.8 bits (94), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
G + PK N KIA L+ L+ + ++ + E+ ++ E I E++ KI A
Sbjct: 221 GSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILA 280
Query: 294 SGAQVVLSKLPIGDVATQYFAD 315
+GA V+L+ I D+ +YF +
Sbjct: 281 TGANVILTTGGIDDMCLKYFVE 302
>sp|P28480|TCPA_RAT T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1
SV=1
Length = 556
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 159/328 (48%), Gaps = 60/328 (18%)
Query: 336 ENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVH 395
+ S G+ N+ A ++ + V+++LGP G+DK++VD G TI+NDGATI+KLL++ H
Sbjct: 10 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH 69
Query: 396 PAAKTLVDIAKSQD--------------AEIQKS-----------------------DSG 418
PAAK L ++A QD AE+ K+ ++
Sbjct: 70 PAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAV 129
Query: 419 EY-------------RGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSL--DDL----- 458
Y R L A T++SSK+I FF+ MVVDAV+++ D+
Sbjct: 130 RYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDIRGQPR 189
Query: 459 LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAE 518
P+N + I K G + +S+L++G + G + K N KIA L+ L+
Sbjct: 190 YPVNSVNILKAHGRSQIESMLINGYALN---CVVGSQGMLKRIVNAKIACLDFSLQKTKM 246
Query: 519 RDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMF 578
+ ++ + E+ ++ E I E++ KI A+GA V+L+ I D+ +YF +
Sbjct: 247 KLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAM 306
Query: 579 CAGRVPEEDLKRTMKACGGAVMTTAHDL 606
RV + DLKR KA G ++++T +L
Sbjct: 307 AVRRVLKRDLKRIAKASGASILSTLANL 334
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 94/172 (54%), Gaps = 6/172 (3%)
Query: 46 EPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 105
+P++ ++ E I E++ KI A+GA V+L+ I D+ +YF + RV + D
Sbjct: 256 DPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRD 315
Query: 106 LKRTMKACGGAVMTTAHDLND------SVLGTCAVFDERQIGSERFNVFSGCKNARTCTI 159
LKR KA G ++++T +L ++LG + +I + + K + +I
Sbjct: 316 LKRIAKASGASILSTLANLEGEETFEATMLGQAEEVVQERICDDELILIKNTKARTSASI 375
Query: 160 IVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS 211
I+RG + +E ERSLHDA+ +V+R + + +VV GGGA+E LS L +Y+
Sbjct: 376 ILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYA 427
Score = 36.6 bits (83), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%)
Query: 234 GFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 293
G + K N KIA L+ L+ + ++ + E+ ++ E I E++ KI A
Sbjct: 221 GSQGMLKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILA 280
Query: 294 SGAQVVLSKLPIGDVATQYFAD 315
+GA V+L+ I D+ +YF +
Sbjct: 281 TGANVILTTGGIDDMCLKYFVE 302
>sp|P47209|TCPE_CAEEL T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans
GN=cct-5 PE=1 SV=1
Length = 542
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 168/359 (46%), Gaps = 57/359 (15%)
Query: 325 QPQILLL-KEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISND 383
QP I++ +E + G + S+I A +AV + +RT+LGPRG+DK++V +G TI+ND
Sbjct: 15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 384 GATIMKLLDIVHPAAKTLVDIAKSQDAEIQKSDSG------------------------- 418
GATIM+ +D+ H AK +V+++KSQD EI +G
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 419 ------------------------EYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMS 454
E R L + A T+L SK++++ F+++ VDAV+S
Sbjct: 135 ADGFDLACKKALETLDSISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLS 194
Query: 455 LDDL----LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLN 510
+ D+ + MI ++ GG LED++LV G+ KT ++ PK KN K+A+L
Sbjct: 195 VADIESKDVNFEMIKMEGKVGGRLEDTILVKGIVIDKTMSHP---QMPKELKNAKVAILT 251
Query: 511 IELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQ 570
E + ++ + S E+++ + D E + + ++ SGA + + + D A
Sbjct: 252 CPFEPPKPKTKHKLDITSTEDFKALRDYERETFETMIRQVKESGATLAICQWGFDDEANH 311
Query: 571 YFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTL 629
D+ V +++ A ++ +L+ LGT + E G+ +D +
Sbjct: 312 LLQANDLPAVRWVGGPEIELLAIATNARIVPRFSELSKEKLGTAGLVREITFGAAKDRM 370
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Query: 48 DEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLK 107
++++ + D E + + ++ SGA + + + D A D+ V +++
Sbjct: 271 EDFKALRDYERETFETMIRQVKESGATLAICQWGFDDEANHLLQANDLPAVRWVGGPEIE 330
Query: 108 RTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFS--GCKNARTCTIIVRGGA 165
A ++ +L+ LGT + E G+ + + S C N + TI VRGG
Sbjct: 331 LLAIATNARIVPRFSELSKEKLGTAGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGN 390
Query: 166 EQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEM 201
+ ++E +R+LHDA+ ++R +R+ +V GGG+ E+
Sbjct: 391 KMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAEL 426
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 233,392,673
Number of Sequences: 539616
Number of extensions: 10454011
Number of successful extensions: 204519
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2043
Number of HSP's successfully gapped in prelim test: 258
Number of HSP's that attempted gapping in prelim test: 154388
Number of HSP's gapped (non-prelim): 29929
length of query: 632
length of database: 191,569,459
effective HSP length: 124
effective length of query: 508
effective length of database: 124,657,075
effective search space: 63325794100
effective search space used: 63325794100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)