Query psy17074
Match_columns 632
No_of_seqs 395 out of 3410
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 21:13:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17074.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17074hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_H T-complex protein 1 sub 100.0 1.2E-61 4.2E-66 538.0 32.3 300 332-632 1-354 (515)
2 3ko1_A Chaperonin; 9-fold symm 100.0 3.1E-61 1.1E-65 538.0 27.6 304 325-632 13-372 (553)
3 3ruv_A Chaperonin, CPN; double 100.0 8.4E-61 2.9E-65 534.5 30.2 302 326-632 4-358 (543)
4 1a6d_A Thermosome (alpha subun 100.0 1E-60 3.5E-65 534.0 28.8 303 327-632 7-362 (545)
5 1a6d_B Thermosome (beta subuni 100.0 1.7E-60 5.9E-65 532.4 30.6 303 326-632 5-363 (543)
6 1q3q_A Thermosome alpha subuni 100.0 2.4E-60 8.1E-65 531.4 31.3 304 325-632 6-365 (548)
7 3p9d_G T-complex protein 1 sub 100.0 1.3E-61 4.4E-66 541.3 18.0 308 324-632 6-367 (550)
8 3iyg_B T-complex protein 1 sub 100.0 1.6E-59 5.6E-64 521.2 32.4 295 334-632 2-351 (513)
9 3iyg_A T-complex protein 1 sub 100.0 1.4E-58 4.7E-63 515.6 32.1 296 334-632 2-360 (529)
10 3iyg_G T-complex protein 1 sub 100.0 1.5E-58 5E-63 513.8 31.8 295 334-632 1-353 (515)
11 3p9d_A T-complex protein 1 sub 100.0 3.4E-59 1.2E-63 522.7 23.8 301 328-632 10-376 (559)
12 3iyg_E T-complex protein 1 sub 100.0 5.1E-58 1.7E-62 509.9 31.9 296 334-632 2-354 (515)
13 3p9d_D T-complex protein 1 sub 100.0 3.8E-59 1.3E-63 519.5 21.9 299 331-632 8-365 (528)
14 3p9d_H T-complex protein 1 sub 100.0 6.9E-59 2.4E-63 521.1 23.8 300 326-632 9-373 (568)
15 3iyg_D T-complex protein 1 sub 100.0 1E-57 3.5E-62 507.3 30.5 293 335-632 4-357 (518)
16 3p9d_C T-complex protein 1 sub 100.0 6.4E-59 2.2E-63 520.7 20.5 304 325-632 2-370 (590)
17 3iyg_Z T-complex protein 1 sub 100.0 2.3E-57 7.9E-62 504.0 29.4 294 335-632 3-357 (517)
18 3p9d_E T-complex protein 1 sub 100.0 9.8E-58 3.4E-62 511.2 25.3 304 326-632 27-397 (562)
19 3iyg_Q T-complex protein 1 sub 100.0 8.8E-57 3E-61 499.6 30.9 294 333-632 1-349 (512)
20 3p9d_F T-complex protein 1 sub 100.0 1.4E-57 4.7E-62 509.3 16.9 301 329-632 4-369 (546)
21 3p9d_B T-complex protein 1 sub 100.0 2.5E-57 8.5E-62 505.7 16.6 300 329-632 4-358 (527)
22 3iyg_G T-complex protein 1 sub 100.0 7.5E-55 2.6E-59 484.0 20.5 270 33-311 235-513 (515)
23 3iyg_A T-complex protein 1 sub 100.0 1.1E-54 3.9E-59 484.1 20.3 269 34-311 238-527 (529)
24 3iyg_H T-complex protein 1 sub 100.0 9.4E-55 3.2E-59 482.8 18.7 270 33-311 237-513 (515)
25 3ruv_A Chaperonin, CPN; double 100.0 7.7E-55 2.6E-59 486.4 17.1 275 33-316 241-523 (543)
26 3iyg_E T-complex protein 1 sub 100.0 1.5E-54 5.3E-59 481.9 19.3 268 35-311 237-514 (515)
27 3iyg_B T-complex protein 1 sub 100.0 2.6E-54 8.8E-59 479.5 20.2 266 38-312 239-511 (513)
28 3iyg_D T-complex protein 1 sub 100.0 5.6E-54 1.9E-58 477.3 21.0 267 36-311 237-517 (518)
29 3aq1_B Thermosome subunit; gro 100.0 4.3E-55 1.5E-59 484.3 11.7 275 33-316 199-480 (500)
30 3p9d_A T-complex protein 1 sub 100.0 8.4E-55 2.9E-59 487.2 13.0 271 33-312 253-548 (559)
31 3iyg_Z T-complex protein 1 sub 100.0 6.2E-54 2.1E-58 476.5 18.8 268 33-310 231-515 (517)
32 3p9d_H T-complex protein 1 sub 100.0 2.7E-54 9.3E-59 483.9 15.2 276 33-317 256-553 (568)
33 1a6d_B Thermosome (beta subuni 100.0 1.6E-54 5.6E-59 484.2 13.2 275 33-316 246-527 (543)
34 1a6d_A Thermosome (alpha subun 100.0 2.8E-54 9.6E-59 482.1 15.1 273 33-314 245-524 (545)
35 3ko1_A Chaperonin; 9-fold symm 100.0 4.9E-55 1.7E-59 488.1 8.9 276 33-317 255-538 (553)
36 1q3q_A Thermosome alpha subuni 100.0 2.6E-54 9E-59 482.6 14.3 273 33-314 248-527 (548)
37 3iyg_Q T-complex protein 1 sub 100.0 2.2E-53 7.6E-58 472.3 20.5 270 33-311 232-511 (512)
38 3p9d_E T-complex protein 1 sub 100.0 3.1E-54 1.1E-58 482.9 13.5 269 34-311 279-557 (562)
39 3p9d_C T-complex protein 1 sub 100.0 4.4E-54 1.5E-58 481.6 13.3 269 35-312 254-586 (590)
40 3p9d_G T-complex protein 1 sub 100.0 7.4E-54 2.5E-58 478.7 12.9 272 33-313 250-528 (550)
41 3p9d_D T-complex protein 1 sub 100.0 4.9E-54 1.7E-58 478.4 11.4 270 33-311 243-527 (528)
42 3p9d_B T-complex protein 1 sub 100.0 7.4E-54 2.5E-58 477.7 3.6 266 38-312 246-518 (527)
43 3p9d_F T-complex protein 1 sub 100.0 3.4E-53 1.2E-57 473.8 8.9 271 33-312 242-537 (546)
44 3aq1_B Thermosome subunit; gro 100.0 3.9E-49 1.3E-53 436.7 18.0 259 370-632 1-316 (500)
45 1kp8_A Groel protein; chaperon 100.0 2.7E-45 9.3E-50 407.7 24.3 259 336-632 4-334 (547)
46 1we3_A CPN60(groel); chaperoni 100.0 1.8E-47 6.2E-52 425.7 5.5 241 61-314 231-527 (543)
47 1kp8_A Groel protein; chaperon 100.0 4.6E-47 1.6E-51 421.9 5.3 241 61-316 232-527 (547)
48 1iok_A Chaperonin 60; chaperon 100.0 2.7E-47 9.3E-52 424.0 2.9 240 61-314 233-527 (545)
49 3rtk_A 60 kDa chaperonin 2; he 100.0 2.6E-45 8.7E-50 406.9 18.5 258 337-632 5-333 (546)
50 1we3_A CPN60(groel); chaperoni 100.0 1.2E-44 4.2E-49 402.9 23.5 257 337-632 5-333 (543)
51 1iok_A Chaperonin 60; chaperon 100.0 2E-45 6.7E-50 409.1 16.1 259 336-632 5-335 (545)
52 3rtk_A 60 kDa chaperonin 2; he 100.0 7.5E-47 2.6E-51 419.1 3.4 240 62-317 232-526 (546)
53 1gml_A T-complex protein 1 sub 100.0 1.1E-33 3.9E-38 271.1 16.2 156 474-632 1-157 (178)
54 1ass_A Thermosome; chaperonin, 100.0 2.5E-33 8.4E-38 263.5 13.2 150 480-632 1-150 (159)
55 1gml_A T-complex protein 1 sub 99.9 1.3E-27 4.5E-32 228.9 13.5 135 33-167 39-174 (178)
56 1ass_A Thermosome; chaperonin, 99.9 6.7E-24 2.3E-28 199.3 10.7 121 34-154 34-154 (159)
57 1srv_A Protein (groel (HSP60 c 99.7 2.7E-17 9.2E-22 147.7 11.8 123 482-631 1-143 (145)
58 3m6c_A 60 kDa chaperonin 1; ch 99.7 1.8E-17 6.3E-22 155.8 10.3 128 477-631 2-149 (194)
59 3osx_A 60 kDa chaperonin; alph 99.7 1.5E-16 5.1E-21 149.9 12.1 124 481-631 13-156 (201)
60 1srv_A Protein (groel (HSP60 c 99.2 1.2E-11 4E-16 111.2 3.8 89 59-150 40-144 (145)
61 3osx_A 60 kDa chaperonin; alph 99.1 5.5E-11 1.9E-15 112.2 3.5 89 59-150 53-157 (201)
62 3m6c_A 60 kDa chaperonin 1; ch 99.0 6.9E-11 2.4E-15 111.2 3.8 89 59-150 46-150 (194)
63 1eo1_A Hypothetical protein MT 61.3 21 0.00072 30.6 7.2 51 547-598 58-108 (124)
64 1o13_A Probable NIFB protein; 55.9 20 0.00069 31.5 6.1 53 63-116 67-119 (136)
65 2yx6_A Hypothetical protein PH 55.3 21 0.0007 30.5 6.0 53 63-116 54-106 (121)
66 1o13_A Probable NIFB protein; 54.4 23 0.00078 31.1 6.3 51 547-598 69-119 (136)
67 1eo1_A Hypothetical protein MT 54.2 23 0.00078 30.4 6.1 53 63-116 56-108 (124)
68 2yx6_A Hypothetical protein PH 52.4 25 0.00086 29.9 6.1 52 546-598 55-106 (121)
69 2wfb_A Putative uncharacterize 50.2 23 0.00079 30.1 5.5 52 63-115 58-110 (120)
70 3psh_A Protein HI_1472; substr 47.6 30 0.001 34.6 6.8 53 64-116 76-154 (326)
71 2xzm_U Ribosomal protein L7AE 47.2 48 0.0017 28.8 7.0 49 64-115 32-85 (126)
72 1rdu_A Conserved hypothetical 47.2 28 0.00096 29.3 5.5 51 547-598 55-105 (116)
73 2xzm_U Ribosomal protein L7AE 46.8 43 0.0015 29.1 6.7 47 547-596 33-84 (126)
74 2wfb_A Putative uncharacterize 46.8 27 0.00093 29.7 5.4 51 546-597 59-110 (120)
75 1rdu_A Conserved hypothetical 42.6 23 0.0008 29.9 4.2 52 64-116 54-105 (116)
76 2lbw_A H/ACA ribonucleoprotein 41.2 63 0.0022 27.7 6.8 46 546-591 28-78 (121)
77 2lbw_A H/ACA ribonucleoprotein 40.9 58 0.002 27.9 6.6 48 64-114 28-80 (121)
78 2r7a_A Bacterial heme binding 40.4 53 0.0018 31.5 7.0 52 64-115 51-111 (256)
79 3v7e_A Ribosome-associated pro 39.7 47 0.0016 26.4 5.3 50 63-115 18-71 (82)
80 3v7e_A Ribosome-associated pro 38.6 45 0.0015 26.5 5.0 49 546-597 19-71 (82)
81 2re2_A Uncharacterized protein 38.6 54 0.0018 28.7 6.1 52 63-116 70-121 (136)
82 2q8p_A Iron-regulated surface 38.6 33 0.0011 33.0 5.3 52 64-115 52-109 (260)
83 3v7q_A Probable ribosomal prot 38.3 71 0.0024 26.3 6.5 51 63-116 26-80 (101)
84 3dtp_E RLC, myosin regulatory 37.9 7.8 0.00027 35.8 0.4 16 18-33 6-21 (196)
85 3md9_A Hemin-binding periplasm 37.8 49 0.0017 31.7 6.3 53 64-116 51-111 (255)
86 2re2_A Uncharacterized protein 37.7 54 0.0018 28.7 5.9 51 546-598 71-121 (136)
87 2r79_A Periplasmic binding pro 36.2 57 0.0019 31.9 6.6 52 64-115 51-110 (283)
88 3v7q_A Probable ribosomal prot 36.0 78 0.0027 26.1 6.4 50 546-598 27-80 (101)
89 2etv_A Iron(III) ABC transport 35.4 43 0.0015 34.0 5.7 52 64-115 88-150 (346)
90 3on1_A BH2414 protein; structu 34.3 72 0.0025 26.2 5.9 51 63-116 25-79 (101)
91 4hn9_A Iron complex transport 33.6 64 0.0022 32.4 6.6 50 65-115 109-164 (335)
92 1n2z_A Vitamin B12 transport p 32.8 47 0.0016 31.6 5.2 36 64-99 49-85 (245)
93 2ale_A SNU13, NHP2/L7AE family 32.6 59 0.002 28.5 5.2 48 65-115 41-93 (134)
94 3psh_A Protein HI_1472; substr 32.1 65 0.0022 32.1 6.3 52 547-598 77-154 (326)
95 4a18_G RPL30; ribosome, eukary 31.6 91 0.0031 25.8 6.1 51 62-115 28-83 (104)
96 3on1_A BH2414 protein; structu 31.1 80 0.0027 25.9 5.7 50 546-598 26-79 (101)
97 2r7a_A Bacterial heme binding 30.9 94 0.0032 29.6 7.1 52 547-598 52-112 (256)
98 2ale_A SNU13, NHP2/L7AE family 30.6 52 0.0018 28.9 4.5 49 546-597 40-93 (134)
99 2qtd_A Uncharacterized protein 30.5 91 0.0031 25.6 6.0 48 66-115 50-97 (105)
100 3iz5_f 60S ribosomal protein L 30.3 1.1E+02 0.0037 25.9 6.4 48 63-110 33-85 (112)
101 3iz5_f 60S ribosomal protein L 29.6 1.2E+02 0.0041 25.6 6.5 50 545-597 33-87 (112)
102 3md9_A Hemin-binding periplasm 29.5 98 0.0034 29.5 6.9 52 547-598 52-111 (255)
103 2q8p_A Iron-regulated surface 29.5 51 0.0018 31.6 4.9 52 547-598 53-110 (260)
104 2aif_A Ribosomal protein L7A; 29.3 81 0.0028 27.6 5.6 48 65-115 50-102 (135)
105 2wi8_A Iron-uptake system-bind 28.7 91 0.0031 30.9 6.7 52 64-115 88-143 (311)
106 4a18_G RPL30; ribosome, eukary 28.4 1.1E+02 0.0038 25.2 6.1 50 545-597 29-83 (104)
107 1xbi_A 50S ribosomal protein L 28.3 97 0.0033 26.4 5.8 48 65-115 38-90 (120)
108 1vq8_F 50S ribosomal protein L 28.1 1.1E+02 0.0038 25.9 6.2 48 65-115 38-90 (120)
109 2r79_A Periplasmic binding pro 27.1 95 0.0032 30.2 6.4 52 547-598 52-111 (283)
110 1xbi_A 50S ribosomal protein L 26.8 1E+02 0.0034 26.3 5.6 49 546-597 37-90 (120)
111 2qtd_A Uncharacterized protein 26.5 1.2E+02 0.004 24.9 5.9 48 548-597 50-97 (105)
112 2aif_A Ribosomal protein L7A; 26.3 86 0.0029 27.4 5.2 50 546-598 49-103 (135)
113 2fc3_A 50S ribosomal protein L 25.9 1.3E+02 0.0043 25.8 6.2 48 65-115 37-89 (124)
114 1n2z_A Vitamin B12 transport p 25.2 80 0.0027 29.9 5.3 52 547-598 50-108 (245)
115 1vq8_F 50S ribosomal protein L 24.9 1.3E+02 0.0045 25.5 6.0 50 546-598 37-91 (120)
116 2fc3_A 50S ribosomal protein L 24.3 1.4E+02 0.0049 25.5 6.2 51 545-598 35-90 (124)
117 3o85_A Ribosomal protein L7AE; 23.5 1.4E+02 0.0048 25.5 6.0 49 64-115 39-92 (122)
118 2etv_A Iron(III) ABC transport 23.3 86 0.0029 31.7 5.4 52 547-598 89-151 (346)
119 2pw9_A Putative formate dehydr 22.4 72 0.0025 31.5 4.3 41 545-585 206-246 (268)
120 2wi8_A Iron-uptake system-bind 22.3 1.3E+02 0.0044 29.7 6.4 52 547-598 89-144 (311)
121 4hn9_A Iron complex transport 22.2 1.2E+02 0.0043 30.2 6.3 51 547-598 109-165 (335)
122 3jyw_G 60S ribosomal protein L 22.1 85 0.0029 26.7 4.2 49 65-116 34-87 (113)
123 2zkr_f 60S ribosomal protein L 21.9 1.3E+02 0.0044 29.6 5.9 48 65-115 144-196 (266)
124 3u5e_c L32, RP73, YL38, 60S ri 21.5 1.4E+02 0.0049 24.7 5.4 50 61-110 27-81 (105)
125 3o85_A Ribosomal protein L7AE; 21.3 1.4E+02 0.0047 25.6 5.4 51 545-598 38-93 (122)
126 3cpq_A 50S ribosomal protein L 21.3 1.9E+02 0.0063 24.1 6.2 50 61-110 26-80 (110)
127 1rlg_A 50S ribosomal protein L 20.8 1.2E+02 0.0041 25.7 4.9 48 65-115 36-88 (119)
128 3jyw_G 60S ribosomal protein L 20.8 88 0.003 26.6 4.0 49 547-598 34-87 (113)
129 2pw9_A Putative formate dehydr 20.6 87 0.003 30.9 4.5 42 77-118 198-241 (268)
130 2zkr_f 60S ribosomal protein L 20.5 2.1E+02 0.0072 28.1 7.1 54 545-598 142-200 (266)
131 3tny_A YFIY (ABC transport sys 20.3 97 0.0033 30.4 4.9 51 65-115 89-143 (303)
No 1
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.2e-61 Score=538.02 Aligned_cols=300 Identities=76% Similarity=1.135 Sum_probs=287.6
Q ss_pred ccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHHhcccc
Q psy17074 332 KEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAE 411 (632)
Q Consensus 332 ~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~q~~~ 411 (632)
++|+++++|.+++.+||.||+.|+++|||||||+||||||+++.|+|+|||||+|||++|+++||+|+|++++|++||++
T Consensus 1 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (515)
T 3iyg_H 1 KEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAE 80 (515)
T ss_pred CCCccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhce
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c--------------------------------------------------ccCCchhh----HHHHHHHHhhhcCCccc
Q psy17074 412 I--------------------------------------------------QKSDSGEY----RGLLEKCAATALSSKLI 437 (632)
Q Consensus 412 ~--------------------------------------------------~~~~~~~~----~~~L~~va~t~l~sK~~ 437 (632)
+ .+++. .+ ++.|.++|+|+++||++
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~-~~~~~~~~~L~~va~tsl~sK~~ 159 (515)
T 3iyg_H 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKK-EDKVEQRKLLEKCAMTALSSKLI 159 (515)
T ss_pred eCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccccc-CChHHHHHHHHHHHHHHhcCCcc
Confidence 9 11211 12 67889999999999999
Q ss_pred cchhhHHHHHHHHHHHHhcccCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccchhhh
Q psy17074 438 HQQKGFFSKMVVDAVMSLDDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKA 517 (632)
Q Consensus 438 ~~~~~~l~~li~~A~~~v~~~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~~ 517 (632)
+.|+++|++|+++|+.+|++++|+++|+|+++.||+..||++++||+|+++|.||||.+||+.++||||++++|+|++++
T Consensus 160 s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k 239 (515)
T 3iyg_H 160 SQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKA 239 (515)
T ss_pred cccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEcccccccc
Confidence 99999999999999999998899999999999999999999999999999999999988999999999999999999999
Q ss_pred ccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCC
Q psy17074 518 ERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGG 597 (632)
Q Consensus 518 ~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa 597 (632)
+++++++.++++++++++.++|++++++++++|++.|++||||+++|++.+++||.++||++++++++++|+|||++|||
T Consensus 240 ~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa 319 (515)
T 3iyg_H 240 EKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGG 319 (515)
T ss_pred cccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 598 AVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 598 ~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
+++++++++++++||+|++|+++++|+++|+||+|
T Consensus 320 ~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g 354 (515)
T 3iyg_H 320 SIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTG 354 (515)
T ss_pred EEeeccccCCHHHCCcccEEEEEEEcCeEEEEEec
Confidence 99999999999999999999999999999999986
No 2
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=3.1e-61 Score=537.99 Aligned_cols=304 Identities=38% Similarity=0.609 Sum_probs=277.0
Q ss_pred cchhhhcccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHH
Q psy17074 325 QPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDI 404 (632)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~ 404 (632)
++|..+|++++++++|.++|.+|+.||+.|+++|||||||+||||||++++|+|+|||||+|||++|+++||+|+|++++
T Consensus 13 ~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 92 (553)
T 3ko1_A 13 GIPVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQI 92 (553)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHHH
T ss_pred CCeEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccc--------------------------c------------------------cCCchhhHHHHHHHHhhhcCC
Q psy17074 405 AKSQDAEI--------------------------Q------------------------KSDSGEYRGLLEKCAATALSS 434 (632)
Q Consensus 405 a~~q~~~~--------------------------~------------------------~~~~~~~~~~L~~va~t~l~s 434 (632)
|++||+++ + +++. .+++.|.++|+|+++|
T Consensus 93 a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~d~e~L~~vA~tsl~s 171 (553)
T 3ko1_A 93 AKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSI-NDTDLLRKIAMTSLSS 171 (553)
T ss_dssp HHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCT-TCHHHHHHHHHHHHTT
T ss_pred hhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCC-CcHHHHHHHHHHHhhH
Confidence 99999999 1 1111 2578999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHhccc------CCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEE
Q psy17074 435 KLIHQQKGFFSKMVVDAVMSLDDL------LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIAL 508 (632)
Q Consensus 435 K~~~~~~~~l~~li~~A~~~v~~~------~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll 508 (632)
|+.+.|+++|++|+++|+.+|+++ +|+++|+|+++.||++.||++++||+|+++|.||+ ||++++||||++
T Consensus 172 K~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~---m~~~ien~kIll 248 (553)
T 3ko1_A 172 KAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPG---MPKRLENAKIAL 248 (553)
T ss_dssp SSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTT---SCSCCBSCEEEE
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCC---CccccccceEEE
Confidence 999999999999999999999842 78889999999999999999999999999999997 689999999999
Q ss_pred ecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhH
Q psy17074 509 LNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 588 (632)
Q Consensus 509 ~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L 588 (632)
++|+|+++++++++++.+++++++.+++++|++++++++++|++.|+|||||+++|++++++||.++||++++++++++|
T Consensus 249 ~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~l 328 (553)
T 3ko1_A 249 IDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDL 328 (553)
T ss_dssp ECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHH
T ss_pred ecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 589 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 589 ~rIa~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
+|||++|||+++++++++++++||+|++|+++++|+++|+||+|
T Consensus 329 eria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g 372 (553)
T 3ko1_A 329 EKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEG 372 (553)
T ss_dssp HHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEES
T ss_pred HHHHHhhCCeeecccccCChhhcchHHHHHHhhcCcceEEEecc
Confidence 99999999999999999999999999999999999999999986
No 3
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=8.4e-61 Score=534.50 Aligned_cols=302 Identities=32% Similarity=0.520 Sum_probs=288.7
Q ss_pred chhhhcccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHH
Q psy17074 326 PQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIA 405 (632)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a 405 (632)
+| .+|++++++++|.++|.+|+.||+.|+++|||||||+||||||++++|+|+|||||+|||++|+++||+|+|++++|
T Consensus 4 ~p-~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a 82 (543)
T 3ruv_A 4 QP-GVLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVA 82 (543)
T ss_dssp CC-CSSCSSEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHH
T ss_pred CC-eeecCCcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHH
Confidence 45 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhccccc--------------------------c------------------------cCCchhhHHHHHHHHhhhcCCc
Q psy17074 406 KSQDAEI--------------------------Q------------------------KSDSGEYRGLLEKCAATALSSK 435 (632)
Q Consensus 406 ~~q~~~~--------------------------~------------------------~~~~~~~~~~L~~va~t~l~sK 435 (632)
++||+++ + +++. .+++.|.++|+|+++||
T Consensus 83 ~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~d~~~L~~va~tsl~sK 161 (543)
T 3ruv_A 83 KTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGA-QDKEILTKIAMTSITGK 161 (543)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCT-TCHHHHHHHHHHHHHHT
T ss_pred HHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCC-CCHHHHHHHHHHHhccc
Confidence 9999999 1 1111 25789999999999999
Q ss_pred cccchhhHHHHHHHHHHHHhccc---CCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEeccc
Q psy17074 436 LIHQQKGFFSKMVVDAVMSLDDL---LPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIE 512 (632)
Q Consensus 436 ~~~~~~~~l~~li~~A~~~v~~~---~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~ 512 (632)
+.+.|+++|++|+++|+.+|+++ +|+++|+|++..||++.||++++||+|+++|.||+ ||++++||||++++++
T Consensus 162 ~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~---m~~~~~n~kIll~~~~ 238 (543)
T 3ruv_A 162 GAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQ---MPKKVTDAKIALLNCA 238 (543)
T ss_dssp CGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTT---SCSEEEEEEEEEESSC
T ss_pred ccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCcc---ccccccCcEEEEEccc
Confidence 99999999999999999999854 78889999999999999999999999999999997 6899999999999999
Q ss_pred chhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHH
Q psy17074 513 LELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTM 592 (632)
Q Consensus 513 Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa 592 (632)
|+++++++++++.+++++++.+++++|++++++++++|++.|+|||||+++|++++++||.++||++|+++++.+|+|||
T Consensus 239 Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia 318 (543)
T 3ruv_A 239 IEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLA 318 (543)
T ss_dssp BSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHH
T ss_pred ccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 593 KACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 593 ~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
++|||+++++++++++++||+|++|+++++|+++|+||+|
T Consensus 319 ~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g 358 (543)
T 3ruv_A 319 KATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEE 358 (543)
T ss_dssp HHHCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEC
T ss_pred HHhCCceecccccCCHHHCCcccEEEEEEeCCceEEEEEC
Confidence 9999999999999999999999999999999999999986
No 4
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1e-60 Score=533.98 Aligned_cols=303 Identities=38% Similarity=0.580 Sum_probs=279.8
Q ss_pred hhhhcccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHH
Q psy17074 327 QILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAK 406 (632)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~ 406 (632)
|..++++++++.+|.++|.+|+.||..|+++|||||||+||||||++++|+++|||||+|||++|+++||+|+|++++|+
T Consensus 7 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 86 (545)
T 1a6d_A 7 PILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSK 86 (545)
T ss_dssp ----------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGG
T ss_pred cccccCCcchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHH
Confidence 56688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccc--------------------------ccCC---------------------chhhHHHHHHHHhhhcCCccccc
Q psy17074 407 SQDAEI--------------------------QKSD---------------------SGEYRGLLEKCAATALSSKLIHQ 439 (632)
Q Consensus 407 ~q~~~~--------------------------~~~~---------------------~~~~~~~L~~va~t~l~sK~~~~ 439 (632)
+||+++ +|.. ...+++.|.++|+|+|+||+.++
T Consensus 87 ~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~~~~~~~l~~va~tsl~sKi~~~ 166 (545)
T 1a6d_A 87 AQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEKSTDDATLRKIALTALSGKNTGL 166 (545)
T ss_dssp CTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHTTTSSCCS
T ss_pred hcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcccccc
Confidence 999999 1100 00257899999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcc------cCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccc
Q psy17074 440 QKGFFSKMVVDAVMSLDD------LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIEL 513 (632)
Q Consensus 440 ~~~~l~~li~~A~~~v~~------~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~L 513 (632)
|+++|++|+++|+.+|++ ++|+++|+|++++|++++||++++||+|+++|.||+ ||++++||||++++++|
T Consensus 167 ~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~---m~~~ien~kIll~~~~L 243 (545)
T 1a6d_A 167 SNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSK---MPDVVKNAKIALIDSAL 243 (545)
T ss_dssp THHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTT---SCSEEEEEEEEEECSCB
T ss_pred cHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCC---CcceecCCEEEEEecCC
Confidence 999999999999999973 377889999999999999999999999999999997 68999999999999999
Q ss_pred hhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHH
Q psy17074 514 ELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMK 593 (632)
Q Consensus 514 e~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~ 593 (632)
++++++.+++|.++++++++++.++|++++++++++|++.|+||||++++|++++++||.++||++|+++++++|+|||+
T Consensus 244 e~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~ 323 (545)
T 1a6d_A 244 EIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAK 323 (545)
T ss_dssp SCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHHHH
T ss_pred CcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 594 ACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 594 ~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
+|||+++++++++++++||+|++|+++++|+++|+||+|
T Consensus 324 ~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g 362 (545)
T 1a6d_A 324 ATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMG 362 (545)
T ss_dssp HHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEE
T ss_pred HhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEec
Confidence 999999999999999999999999999999999999975
No 5
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.7e-60 Score=532.44 Aligned_cols=303 Identities=35% Similarity=0.564 Sum_probs=276.0
Q ss_pred chhhhcccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHH
Q psy17074 326 PQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIA 405 (632)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a 405 (632)
+|..++++|++..+|.++|.+|+.||..|+++|||||||+||||||++++|+++|||||+|||++|+++||+|+|++++|
T Consensus 5 ~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~a 84 (543)
T 1a6d_B 5 QPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVS 84 (543)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHHH
T ss_pred cchhhcCCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhccccc--------------------------------------------------ccCCchhhHHHHHHHHhhhcCCc
Q psy17074 406 KSQDAEI--------------------------------------------------QKSDSGEYRGLLEKCAATALSSK 435 (632)
Q Consensus 406 ~~q~~~~--------------------------------------------------~~~~~~~~~~~L~~va~t~l~sK 435 (632)
++||+++ .+++. .+++.|.++|+|+|+||
T Consensus 85 ~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~-~~~~~l~~va~tsl~sK 163 (543)
T 1a6d_B 85 KTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGA-DEKALLLKMAQTSLNSK 163 (543)
T ss_dssp TCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCT-THHHHHHHHHHHHHTTS
T ss_pred HhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCHHHHHHHHHHHhccc
Confidence 9999999 11221 24789999999999999
Q ss_pred cccchhhHHHHHHHHHHHHhcc------cCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEe
Q psy17074 436 LIHQQKGFFSKMVVDAVMSLDD------LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALL 509 (632)
Q Consensus 436 ~~~~~~~~l~~li~~A~~~v~~------~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~ 509 (632)
+.++|+++|++|+++|+.++++ ++|+++|+|++++||++.||++++||+|+++|.||+ ||++++||||+++
T Consensus 164 i~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~---m~~~ien~kIll~ 240 (543)
T 1a6d_B 164 SASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPG---MPDVVKDAKIALL 240 (543)
T ss_dssp GGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTT---SCSEEEEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCC---CcceecCCeEEEE
Confidence 9999999999999999999973 367889999999999999999999999999999996 6899999999999
Q ss_pred cccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHH
Q psy17074 510 NIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLK 589 (632)
Q Consensus 510 ~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~ 589 (632)
+++|++++++++++|.++++++++++.++|++++++++++|++.|++|||++++|++++++||.++||++|+++++++|+
T Consensus 241 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le 320 (543)
T 1a6d_B 241 DAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMD 320 (543)
T ss_dssp SSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHH
T ss_pred ecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 590 RTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 590 rIa~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
|||++|||+++++++++++++||+|++|+++++|+++|+||+|
T Consensus 321 ~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g 363 (543)
T 1a6d_B 321 KLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTG 363 (543)
T ss_dssp HHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHhCCceecccccCCHHHCCCceEEEEEEecCceEEEEec
Confidence 9999999999999999999999999999999999999999975
No 6
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.4e-60 Score=531.42 Aligned_cols=304 Identities=35% Similarity=0.534 Sum_probs=287.8
Q ss_pred cchhhhcccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHH
Q psy17074 325 QPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDI 404 (632)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~ 404 (632)
++|..++++++++.+|.++|.+|+.||..|+++|||||||+||||||++++|+++|||||+|||++|+++||+|+|++++
T Consensus 6 ~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 85 (548)
T 1q3q_A 6 GQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEV 85 (548)
T ss_dssp ---CCCSCTTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHHH
T ss_pred CCCcccccCCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccc--------------------------------------------------ccCCchhhHHHHHHHHhhhcCC
Q psy17074 405 AKSQDAEI--------------------------------------------------QKSDSGEYRGLLEKCAATALSS 434 (632)
Q Consensus 405 a~~q~~~~--------------------------------------------------~~~~~~~~~~~L~~va~t~l~s 434 (632)
|++||+++ .+++. .+++.|.++|+|+|+|
T Consensus 86 a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~d~~~l~~va~tsl~s 164 (548)
T 1q3q_A 86 AKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDP-DDEETLLKIAATSITG 164 (548)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCT-TCHHHHHHHHHHHSCS
T ss_pred HHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCHHHHHHHHHHHhhc
Confidence 99999999 11211 2478999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHhcc------cCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEE
Q psy17074 435 KLIHQQKGFFSKMVVDAVMSLDD------LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIAL 508 (632)
Q Consensus 435 K~~~~~~~~l~~li~~A~~~v~~------~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll 508 (632)
|+.++|+++|++|+++|+.+|++ ++|+++|+|++++|++++||++++||+|+++|.||+ ||++++||||++
T Consensus 165 Ki~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~---m~~~ien~kIll 241 (548)
T 1q3q_A 165 KNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPR---MPKRVENAKIAL 241 (548)
T ss_dssp STTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTT---SCSEESSEEEEE
T ss_pred cccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCC---CcceecCCEEEE
Confidence 99999999999999999999973 377889999999999999999999999999999997 689999999999
Q ss_pred ecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhH
Q psy17074 509 LNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDL 588 (632)
Q Consensus 509 ~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L 588 (632)
++++|++++++++++|.++++++++++.++|++++++++++|++.|+||||++++|++++++||.++||++|+++++++|
T Consensus 242 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~l 321 (548)
T 1q3q_A 242 INEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDM 321 (548)
T ss_dssp ECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHH
T ss_pred EecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 589 KRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 589 ~rIa~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
+|||++|||+++++++++++++||+|++|+++++|+++|+||+|
T Consensus 322 e~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g 365 (548)
T 1q3q_A 322 EKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEG 365 (548)
T ss_dssp HHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEEC
T ss_pred HHHHHHhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEec
Confidence 99999999999999999999999999999999999999999986
No 7
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.3e-61 Score=541.32 Aligned_cols=308 Identities=62% Similarity=0.998 Sum_probs=285.4
Q ss_pred ccchhhhcccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHH
Q psy17074 324 RQPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVD 403 (632)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~ 403 (632)
+++|..+|++++++++|.+++.+|+.||+.|+++|||||||+||||||++++|+|+|||||+|||++|+++||+|+|+++
T Consensus 6 ~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e 85 (550)
T 3p9d_G 6 QTPTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVD 85 (550)
T ss_dssp ----------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHHH
T ss_pred CCcchhhhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccc--------------------------cc------------------------CCchhh---HHHHHHHHhh
Q psy17074 404 IAKSQDAEI--------------------------QK------------------------SDSGEY---RGLLEKCAAT 430 (632)
Q Consensus 404 ~a~~q~~~~--------------------------~~------------------------~~~~~~---~~~L~~va~t 430 (632)
+|++||+++ +| ++. .+ ++.|.++|+|
T Consensus 86 ~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~~~~~~~~L~~vA~t 164 (550)
T 3p9d_G 86 ISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITS-EKSSGRELLERCART 164 (550)
T ss_dssp HHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCC-C------CHHHHHHH
T ss_pred HHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC-CcchhHHHHHHHHHH
Confidence 999999999 11 111 12 6789999999
Q ss_pred hcCCccccchhhHHHHHHHHHHHHhc-ccCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEe
Q psy17074 431 ALSSKLIHQQKGFFSKMVVDAVMSLD-DLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALL 509 (632)
Q Consensus 431 ~l~sK~~~~~~~~l~~li~~A~~~v~-~~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~ 509 (632)
+++||+++.|+++|++|+++|+.+|+ +++|+++|+|++++||++.||++++||+|+++|.||||.+||++++||||+++
T Consensus 165 sl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kIll~ 244 (550)
T 3p9d_G 165 AMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSL 244 (550)
T ss_dssp HHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCEEEE
T ss_pred hccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCceEEEe
Confidence 99999999999999999999999998 67899999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHH
Q psy17074 510 NIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLK 589 (632)
Q Consensus 510 ~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~ 589 (632)
+++|++++++.++++.+++++++.+++++|++++++++++|++.|++||||+++|++.+++||.++||++++++++.+|+
T Consensus 245 ~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~~le 324 (550)
T 3p9d_G 245 NVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDMN 324 (550)
T ss_dssp CSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTTHHH
T ss_pred ccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 590 RTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 590 rIa~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
|||++|||+++++++++++++||+|+.|+++++|+++|++|+|
T Consensus 325 rIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g 367 (550)
T 3p9d_G 325 RVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQG 367 (550)
T ss_dssp HHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBC
T ss_pred HHHHHhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEec
Confidence 9999999999999999999999999999999999999999986
No 8
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.6e-59 Score=521.21 Aligned_cols=295 Identities=29% Similarity=0.456 Sum_probs=281.6
Q ss_pred CccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCC--CCeEEccChHHHHhhccccChHhHHHHHHHHhcccc
Q psy17074 334 GTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQN--GKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAE 411 (632)
Q Consensus 334 ~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~--g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~q~~~ 411 (632)
|+++++|.++|.+|+.||+.|+++|||||||+||||||++++ |+|+|||||+|||++|+++||+|+|++++|++||++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e 81 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDE 81 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhh
Confidence 567889999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred c--------------------------------------------------ccCCch--hhHHHHHHHHhhhcCCccccc
Q psy17074 412 I--------------------------------------------------QKSDSG--EYRGLLEKCAATALSSKLIHQ 439 (632)
Q Consensus 412 ~--------------------------------------------------~~~~~~--~~~~~L~~va~t~l~sK~~~~ 439 (632)
+ .+++.. .+++.|.++|+|+++||+.++
T Consensus 82 ~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~ 161 (513)
T 3iyg_B 82 VGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTH 161 (513)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhccccccc
Confidence 9 111111 147889999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcccCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccchhhhcc
Q psy17074 440 QKGFFSKMVVDAVMSLDDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAER 519 (632)
Q Consensus 440 ~~~~l~~li~~A~~~v~~~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~~~~ 519 (632)
|.++|++|+++|+.+|++++|+++|+|+++.||+..||++++||+|+++|.|+ ||++++||||++++|+|++++++
T Consensus 162 ~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~----m~~~~en~kIll~~~~Le~~k~e 237 (513)
T 3iyg_B 162 HKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN----QPKRIENAKILIANTGMDTDKIK 237 (513)
T ss_pred chHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC----CceeecCceEEEEcCCccccccc
Confidence 99999999999999999878999999999999999999999999999999887 89999999999999999999999
Q ss_pred -CCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 520 -DNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 520 -~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
+++++.+++++++.++.++|++++++++++|++.|+|||||+++|++++++||.++||++|+++++.+|+|||++|||+
T Consensus 238 ~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~ 317 (513)
T 3iyg_B 238 IFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGE 317 (513)
T ss_pred ccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 599 VMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 599 ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
++++++++++++||+|++|++..+|+++|++|+|
T Consensus 318 ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g 351 (513)
T 3iyg_B 318 IASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSG 351 (513)
T ss_pred EecccccCCHhHCCcccEEEEEEECCeEEEEEec
Confidence 9999999999999999999999999999999985
No 9
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-58 Score=515.59 Aligned_cols=296 Identities=33% Similarity=0.505 Sum_probs=277.7
Q ss_pred CccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHHhccccc-
Q psy17074 334 GTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEI- 412 (632)
Q Consensus 334 ~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~q~~~~- 412 (632)
++++.+|.++|.+|+.||..|+++|||||||+||+|||++++|+++|||||+|||++|+++||+|+|++++|++||+++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~G 81 (529)
T 3iyg_A 2 FGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVG 81 (529)
T ss_pred CcchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhC
Confidence 4577899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -------------------------cc---------------------CCc---hhhHHHHHHHHhhhcCCccccchhhH
Q psy17074 413 -------------------------QK---------------------SDS---GEYRGLLEKCAATALSSKLIHQQKGF 443 (632)
Q Consensus 413 -------------------------~~---------------------~~~---~~~~~~L~~va~t~l~sK~~~~~~~~ 443 (632)
+| ... ..+++.|.++|+|+++||+.++|+++
T Consensus 82 DGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~ 161 (529)
T 3iyg_A 82 DGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDF 161 (529)
T ss_pred CChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHH
Confidence 11 100 01478899999999999999999999
Q ss_pred HHHHHHHHHHHhc-------ccCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccchhh
Q psy17074 444 FSKMVVDAVMSLD-------DLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELK 516 (632)
Q Consensus 444 l~~li~~A~~~v~-------~~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~ 516 (632)
|++|+++|+.+|+ .++|+++|+|+++.||++.||++++||+|++++.||+ ||++++||||++++|+|+++
T Consensus 162 i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~---m~~~ien~kIlll~~~le~~ 238 (529)
T 3iyg_A 162 FANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQG---MPKRIVNAKIACLDFSLQKT 238 (529)
T ss_pred HHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCccccc---CCcccCCceEEEecCCcccc
Confidence 9999999999996 1466788999999999999999999999999999996 78999999999999999999
Q ss_pred hccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcC
Q psy17074 517 AERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACG 596 (632)
Q Consensus 517 ~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tG 596 (632)
++++++++.+++++++.++.++|++++++++++|++.|++||||+++|++++++||.++||++|+++++++|+|||++||
T Consensus 239 k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tG 318 (529)
T 3iyg_A 239 KMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASG 318 (529)
T ss_pred cccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeecccCCC------CCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 597 GAVMTTAHDLN------DSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 597 a~ii~~l~~l~------~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
|++++++++++ +++||+|+.|++.++|+++|+||+|
T Consensus 319 a~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g 360 (529)
T 3iyg_A 319 ATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKN 360 (529)
T ss_pred CeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEc
Confidence 99999987765 6789999999999999999999986
No 10
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-58 Score=513.80 Aligned_cols=295 Identities=27% Similarity=0.508 Sum_probs=278.2
Q ss_pred CccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHHhccccc-
Q psy17074 334 GTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEI- 412 (632)
Q Consensus 334 ~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~q~~~~- 412 (632)
|+++++|.+++.+|+.||+.|+++|||||||+||||||+++.|+++|||||+|||++|+++||+|+|++++|++||+++
T Consensus 1 ~~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~G 80 (515)
T 3iyg_G 1 NTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVG 80 (515)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhC
Confidence 4577899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -------------------------c------------------------cCCchhhHHHHHHHHhhhcCCccccchhhH
Q psy17074 413 -------------------------Q------------------------KSDSGEYRGLLEKCAATALSSKLIHQQKGF 443 (632)
Q Consensus 413 -------------------------~------------------------~~~~~~~~~~L~~va~t~l~sK~~~~~~~~ 443 (632)
+ +++. .+++.|.++|+|+++||.++.|.++
T Consensus 81 DGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~~~~~l~~va~tsl~sK~i~~~~~~ 159 (515)
T 3iyg_G 81 DGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDT-SNRDTMLNIINSSITTKVISRWSSL 159 (515)
T ss_pred CChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCC-CCHHHHHHHHHHHhcCCchhhHHHH
Confidence 1 1111 2468899999999999999999999
Q ss_pred HHHHHHHHHHHhc-c-----cCCCC-cEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccchhh
Q psy17074 444 FSKMVVDAVMSLD-D-----LLPLN-MIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELK 516 (632)
Q Consensus 444 l~~li~~A~~~v~-~-----~~~~~-~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~ 516 (632)
+++++++|+..|. + ++|++ +|+|++++||++.||++++||+|+++|.||+ ||++++||||++++|+|+++
T Consensus 160 ~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~---m~~~ien~kIll~~~~Le~~ 236 (515)
T 3iyg_G 160 ACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPR---MRRYIKNPRIVLLDSSLEYK 236 (515)
T ss_pred HHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCC---CcceeeeeEEEEEccccccc
Confidence 9999999999886 2 24554 4999999999999999999999999999985 89999999999999999999
Q ss_pred hccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcC
Q psy17074 517 AERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACG 596 (632)
Q Consensus 517 ~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tG 596 (632)
++++++++.+++++++.+++++|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||++||
T Consensus 237 k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tG 316 (515)
T 3iyg_G 237 KGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACG 316 (515)
T ss_pred ccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEeecccCCCCCCCee-eeEEEEEEEcCeEEEEecC
Q psy17074 597 GAVMTTAHDLNDSVLGT-CAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 597 a~ii~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~ 632 (632)
|+++++++++++++||+ |+.|+++++|+++|+||+|
T Consensus 317 a~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g 353 (515)
T 3iyg_G 317 ARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITE 353 (515)
T ss_pred CeeeccccccChhhcCCcccEEEEEEECCceEEEEeC
Confidence 99999999999999999 9999999999999999986
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=3.4e-59 Score=522.67 Aligned_cols=301 Identities=34% Similarity=0.502 Sum_probs=284.5
Q ss_pred hhhcccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHHh
Q psy17074 328 ILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKS 407 (632)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~ 407 (632)
..-|+++.++.+|.++|.+|+.||..|+++|||||||+||||||++++|+|+|||||+|||++|+++||+|+|++++|++
T Consensus 10 ~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~ 89 (559)
T 3p9d_A 10 SDTLFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQ 89 (559)
T ss_dssp CCSCCSSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHH
T ss_pred cchhhccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 34578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc--------------------------cc-------------------------CCchhhHHHHHHHHhhhcCCcc
Q psy17074 408 QDAEI--------------------------QK-------------------------SDSGEYRGLLEKCAATALSSKL 436 (632)
Q Consensus 408 q~~~~--------------------------~~-------------------------~~~~~~~~~L~~va~t~l~sK~ 436 (632)
||+++ +| ++. .+++.|.++|+|+++||+
T Consensus 90 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~-~~~e~L~~vA~tsl~sK~ 168 (559)
T 3p9d_A 90 QDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDT-LGKETLINIAKTSMSSKI 168 (559)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC---CTTHHHHHHHTTSSSG
T ss_pred HHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCC-CCHHHHHHHHHHHhccCc
Confidence 99999 11 110 135679999999999999
Q ss_pred ccchhhHHHHHHHHHHHHhc-------ccCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeec--CceEE
Q psy17074 437 IHQQKGFFSKMVVDAVMSLD-------DLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYK--NPKIA 507 (632)
Q Consensus 437 ~~~~~~~l~~li~~A~~~v~-------~~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~--n~kIl 507 (632)
+++|+++|++|+++|+.+|+ +.+|++.|+|++++||++.||++++||+|+++|.||+ ||++++ ||||+
T Consensus 169 ~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~---m~~~ie~~n~kIl 245 (559)
T 3p9d_A 169 IGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQA---MPKRIAGGNVKIA 245 (559)
T ss_dssp GGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTT---SCSEECSSSBCEE
T ss_pred ccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCC---cceeeccCCceEE
Confidence 99999999999999999997 3588889999999999999999999999999999996 789999 99999
Q ss_pred EecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchh
Q psy17074 508 LLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEED 587 (632)
Q Consensus 508 l~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~ 587 (632)
+++|+|+++++++++++.++++++++++.++|++++++++++|++.|++||||+++|++++++||.++||++|+++++.+
T Consensus 246 l~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~ 325 (559)
T 3p9d_A 246 CLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKED 325 (559)
T ss_dssp EETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHH
T ss_pred EEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeEeecc------cCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 588 LKRTMKACGGAVMTTA------HDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 588 L~rIa~~tGa~ii~~l------~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
|+|||++|||++++++ +++++++||+|++|++.++|+++|+||+|
T Consensus 326 le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g 376 (559)
T 3p9d_A 326 LRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKG 376 (559)
T ss_dssp HHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEE
T ss_pred HHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEc
Confidence 9999999999999998 78999999999999999999999999975
No 12
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.1e-58 Score=509.90 Aligned_cols=296 Identities=28% Similarity=0.455 Sum_probs=279.6
Q ss_pred CccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHHhccccc-
Q psy17074 334 GTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEI- 412 (632)
Q Consensus 334 ~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~q~~~~- 412 (632)
.+++.+|.++|.+|+.||..|+++|||||||+||||||++++|+|+|||||+|||++|+++||+|+|++++|++||+++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~G 81 (515)
T 3iyg_E 2 RKSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIG 81 (515)
T ss_pred cchhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhC
Confidence 3567799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -------------------------c------------------------cCCc-hhhHHHHHHHHhhhcCCccccchhh
Q psy17074 413 -------------------------Q------------------------KSDS-GEYRGLLEKCAATALSSKLIHQQKG 442 (632)
Q Consensus 413 -------------------------~------------------------~~~~-~~~~~~L~~va~t~l~sK~~~~~~~ 442 (632)
+ +++. ..+++.|.++|+|+++||+++.+.+
T Consensus 82 DGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~ 161 (515)
T 3iyg_E 82 DGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHR 161 (515)
T ss_pred CchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHH
Confidence 1 1110 1236789999999999999998999
Q ss_pred HHHHHHHHHHHHhcc----cCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccchhhhc
Q psy17074 443 FFSKMVVDAVMSLDD----LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAE 518 (632)
Q Consensus 443 ~l~~li~~A~~~v~~----~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~~~ 518 (632)
+|++++++|+..|.+ ++|+++|+|++++||++.||++++||+|+++|.||+ ||+.++||+|++++|+|++.++
T Consensus 162 ~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~---m~~~~~~~kIall~~~le~~k~ 238 (515)
T 3iyg_E 162 QMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQ---MPKQVEDAKIAILTCPFEPPKP 238 (515)
T ss_pred HHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEeccccccc---ccccCCCceEEEEcCccccccc
Confidence 999999999999974 478899999999999999999999999999999996 6899999999999999999999
Q ss_pred cCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 519 RDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 519 ~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
+.++++.++++++++++.++|++++++++++|++.|+|||||+++|++++++||.++||++++++++.+|+|||++|||+
T Consensus 239 ~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ 318 (515)
T 3iyg_E 239 KTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGR 318 (515)
T ss_pred cccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecccCCCCCCCeeeeEEEEEEEcC--eEEEEecC
Q psy17074 599 VMTTAHDLNDSVLGTCAVFDERQIGS--ERDTLNRE 632 (632)
Q Consensus 599 ii~~l~~l~~~~lG~~~~v~~~~ig~--~~~~~~~~ 632 (632)
++++++++++++||+|++|+++++|+ ++|+||+|
T Consensus 319 ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g 354 (515)
T 3iyg_E 319 IVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQ 354 (515)
T ss_pred EecccccCCHHHCCcceEEEEEEeccccceEEEEEc
Confidence 99999999999999999999999998 89999976
No 13
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=3.8e-59 Score=519.51 Aligned_cols=299 Identities=27% Similarity=0.423 Sum_probs=284.6
Q ss_pred cccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHHhccc
Q psy17074 331 LKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDA 410 (632)
Q Consensus 331 ~~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~q~~ 410 (632)
++.+.++.+|.++|.+|+.||..|+++|||||||+||||||++++|+|+|||||+|||++|+++||+|+|++++|++||+
T Consensus 8 ~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~ 87 (528)
T 3p9d_D 8 NATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDS 87 (528)
T ss_dssp CCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHHHH
T ss_pred ccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHhhh
Confidence 55677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc--------------------------------------------------ccCCchhhHHHHHHHHhhhcCCccccch
Q psy17074 411 EI--------------------------------------------------QKSDSGEYRGLLEKCAATALSSKLIHQQ 440 (632)
Q Consensus 411 ~~--------------------------------------------------~~~~~~~~~~~L~~va~t~l~sK~~~~~ 440 (632)
++ .+++. .+++.|.++|+|+++||+++.|
T Consensus 88 e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~~~e~l~~va~tsl~sK~~~~~ 166 (528)
T 3p9d_D 88 EAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSL-SDREQLVRAASTSLSSKIVSQY 166 (528)
T ss_dssp HTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCS-CCHHHHHHHHHHHSCSSSCSTT
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCC-CCHHHHHHHHHHHhcCCccchh
Confidence 99 11111 1578999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcc----cCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccchhh
Q psy17074 441 KGFFSKMVVDAVMSLDD----LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELK 516 (632)
Q Consensus 441 ~~~l~~li~~A~~~v~~----~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~ 516 (632)
+++|++|+++|+.+|++ .+|+++|+|++++||++.||++++||+|+++|.||+| ||++++||||++++|+|+++
T Consensus 167 ~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~--m~~~ien~kIll~~~~le~~ 244 (528)
T 3p9d_D 167 SSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAG--GPTRKEKAKIGLIQFQISPP 244 (528)
T ss_dssp HHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSS--CCSEESSEEEEEECCCSSCC
T ss_pred HHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCccc--CcccccCceEEEEecccccc
Confidence 99999999999999973 4778999999999999999999999999999999986 89999999999999999999
Q ss_pred hccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCc-----cHHHHHHHHHCCcEEEecCCchhHHHH
Q psy17074 517 AERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPI-----GDVATQYFADRDMFCAGRVPEEDLKRT 591 (632)
Q Consensus 517 ~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I-----~~~al~~L~~~~I~~v~~v~~~~L~rI 591 (632)
++++++++.++++++++++.++|++++++++++|++.|+|||||+++| ++++++||.++||++|+++++.+|+||
T Consensus 245 k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~le~i 324 (528)
T 3p9d_D 245 KPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIEFL 324 (528)
T ss_dssp CCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHHHHH
T ss_pred ccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 592 MKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 592 a~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
|++|||+++++++++++++||+|+.|++.++|+++|++|+|
T Consensus 325 a~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g 365 (528)
T 3p9d_D 325 SKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTG 365 (528)
T ss_dssp HHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTT
T ss_pred HHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEc
Confidence 99999999999999999999999999999999999999975
No 14
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=6.9e-59 Score=521.12 Aligned_cols=300 Identities=25% Similarity=0.405 Sum_probs=283.2
Q ss_pred chhhhcccCccccCC-chhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHH
Q psy17074 326 PQILLLKEGTENSQG-KPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDI 404 (632)
Q Consensus 326 ~~~~~~~~~~~~~~~-~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~ 404 (632)
+...+|++|+++++| .++|.+|+.||+.|+++|||||||+||||||++++|+++|||||+|||++|+++||+|+|++++
T Consensus 9 ~~~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~ 88 (568)
T 3p9d_H 9 PNAGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMA 88 (568)
T ss_dssp CCCSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHH
T ss_pred chhhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHH
Confidence 456789999999999 5799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccc--------------------------c------------------------cC--CchhhHHHHHHHHhhhc
Q psy17074 405 AKSQDAEI--------------------------Q------------------------KS--DSGEYRGLLEKCAATAL 432 (632)
Q Consensus 405 a~~q~~~~--------------------------~------------------------~~--~~~~~~~~L~~va~t~l 432 (632)
|++||+++ + +. +. .+++.|.++|+|++
T Consensus 89 a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~-~~~~~l~~va~tsl 167 (568)
T 3p9d_H 89 TEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDK-NDKNELLKMIKPVI 167 (568)
T ss_dssp HHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCC-CTTHHHHHHHHHHH
T ss_pred HHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCC-CCHHHHHHHHHHHh
Confidence 99999999 0 11 11 35788999999999
Q ss_pred CCccccchhhHHHHHHHHHHHHhcc---------cCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeec-
Q psy17074 433 SSKLIHQQKGFFSKMVVDAVMSLDD---------LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYK- 502 (632)
Q Consensus 433 ~sK~~~~~~~~l~~li~~A~~~v~~---------~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~- 502 (632)
+||+.+++ ++|++|+++|+.+|++ ++|+++|+|++++||++.||++++||+|++++. +||++++
T Consensus 168 ~sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~-----~m~~~i~~ 241 (568)
T 3p9d_H 168 SSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPE-----GHVKSLSE 241 (568)
T ss_dssp TTTSTTCH-HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBS-----SGGGSCCC
T ss_pred hccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeeccc-----CCcEEEec
Confidence 99998887 9999999999999974 377889999999999999999999999999984 4899999
Q ss_pred --CceEEEecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEE
Q psy17074 503 --NPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCA 580 (632)
Q Consensus 503 --n~kIll~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v 580 (632)
||||++++|+|+++++++++++.+++++++.++.++|++++++++++|++.|++||||+++|++.+++||.++||++|
T Consensus 242 ~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av 321 (568)
T 3p9d_H 242 DKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVL 321 (568)
T ss_dssp CSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEE
T ss_pred CCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCchhHHHHHHHcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 581 GRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 581 ~~v~~~~L~rIa~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
+++++.+|+|||++|||+++++++++++++||+|+.|++.++|+++|+||+|
T Consensus 322 ~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g 373 (568)
T 3p9d_H 322 KVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQ 373 (568)
T ss_dssp CCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCC
T ss_pred ecCCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEec
Confidence 9999999999999999999999999999999999999999999999999985
No 15
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-57 Score=507.34 Aligned_cols=293 Identities=30% Similarity=0.458 Sum_probs=277.8
Q ss_pred ccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHHhccccc--
Q psy17074 335 TENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEI-- 412 (632)
Q Consensus 335 ~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~q~~~~-- 412 (632)
.++++|.++|.+|+.||..|+++|||||||+||||||++++|+|+|||||+|||++|+++||+|+|++++|++||+++
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GD 83 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGD 83 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCC
Confidence 456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ------------------------c------------------------cCCchhhHHHHHHHHhhhcCCccccchhhHH
Q psy17074 413 ------------------------Q------------------------KSDSGEYRGLLEKCAATALSSKLIHQQKGFF 444 (632)
Q Consensus 413 ------------------------~------------------------~~~~~~~~~~L~~va~t~l~sK~~~~~~~~l 444 (632)
+ +++. .+++.|.++|+|+++||+.+.|.++|
T Consensus 84 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~~~~~l~~vA~tsl~sK~~~~~~~~i 162 (518)
T 3iyg_D 84 GTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVEL-SDRETLLNSAATSLNSKVVSQYSSLL 162 (518)
T ss_pred CceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCC-CChHHHHHHhHhhhccccchhhHHHH
Confidence 1 1111 15788999999999999999999999
Q ss_pred HHHHHHHHHHhcc-----cCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccchhhhcc
Q psy17074 445 SKMVVDAVMSLDD-----LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAER 519 (632)
Q Consensus 445 ~~li~~A~~~v~~-----~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~~~~ 519 (632)
++|+++|+.+|++ .+|+++|+|+++.||+..||++++||+|+++|.| +||++++||||++++|+|++++++
T Consensus 163 ~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~----~mp~~i~n~kIlll~~~Le~~k~~ 238 (518)
T 3iyg_D 163 SPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN----SGITRVEKAKIGLIQFCLSAPKTD 238 (518)
T ss_pred HHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEeccccc----CCCccccCceEEEEEeeccccccc
Confidence 9999999999974 3788899999999999999999999999999987 389999999999999999999999
Q ss_pred CCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEE-----eCCccHHHHHHHHHCCcEEEecCCchhHHHHHHH
Q psy17074 520 DNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLS-----KLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 594 (632)
Q Consensus 520 ~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~-----~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~ 594 (632)
+++++.++++++++++.++|++++++++++|++.|+||||| +++|++++++||.++||++|+++++.+|+|||++
T Consensus 239 ~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~ 318 (518)
T 3iyg_D 239 MDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKT 318 (518)
T ss_pred cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred cCCeEeecccCCCCCCCeeeeEEEEEEEcC-eEEEEecC
Q psy17074 595 CGGAVMTTAHDLNDSVLGTCAVFDERQIGS-ERDTLNRE 632 (632)
Q Consensus 595 tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~-~~~~~~~~ 632 (632)
|||+++++++++++++||+|++|++.++|+ ++|+||+|
T Consensus 319 tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g 357 (518)
T 3iyg_D 319 IGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITG 357 (518)
T ss_pred hCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEEC
Confidence 999999999999999999999999999999 89999986
No 16
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=6.4e-59 Score=520.72 Aligned_cols=304 Identities=26% Similarity=0.490 Sum_probs=283.6
Q ss_pred cchhhhcccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHH
Q psy17074 325 QPQILLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDI 404 (632)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~ 404 (632)
++|..+|++++++++|.++|.+|+.||..|+++|+|||||+||||||++++|+|+|||||+|||++|+++||+|+|++++
T Consensus 2 ~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e~ 81 (590)
T 3p9d_C 2 QAPVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLEL 81 (590)
T ss_dssp ----CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHHH
T ss_pred CCCeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccc---------------------------c------------------------cCCchhhHHHHHHHHhhhcC
Q psy17074 405 AKSQDAEI---------------------------Q------------------------KSDSGEYRGLLEKCAATALS 433 (632)
Q Consensus 405 a~~q~~~~---------------------------~------------------------~~~~~~~~~~L~~va~t~l~ 433 (632)
|++||+++ + +++. .+++.|.++|+|+|+
T Consensus 82 a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~~~e~L~~vA~tsls 160 (590)
T 3p9d_C 82 SRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDV-ENDAAMKKLIQASIG 160 (590)
T ss_dssp TTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTT-CCTHHHHHHHTTTST
T ss_pred HHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhcccc-CCHHHHHHHHHHHHh
Confidence 99999999 0 1111 135789999999999
Q ss_pred CccccchhhHHHHHHHHHHHHhcc------------cCCCC-cEEEEEecCCCcccceeEEeEEEecccCCCCCcCCcee
Q psy17074 434 SKLIHQQKGFFSKMVVDAVMSLDD------------LLPLN-MIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKT 500 (632)
Q Consensus 434 sK~~~~~~~~l~~li~~A~~~v~~------------~~~~~-~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~ 500 (632)
||+.++|+++|++|+++|+..|+. ++|++ +|+|++++||++.||++++||+|++++.|+ +||++
T Consensus 161 SK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~---~m~~~ 237 (590)
T 3p9d_C 161 TKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHP---KMSRH 237 (590)
T ss_dssp TSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCT---TSCSC
T ss_pred cccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCC---CCcce
Confidence 999999999999999999999973 23443 799999999999999999999999999988 48999
Q ss_pred ecCceEEEecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEE
Q psy17074 501 YKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCA 580 (632)
Q Consensus 501 ~~n~kIll~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v 580 (632)
++||||++++|+|++++++++++|.++++++++++++.|++++++++++|++.|++|||++++|++++++||.++||++|
T Consensus 238 ~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av 317 (590)
T 3p9d_C 238 IENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVL 317 (590)
T ss_dssp EESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCC
T ss_pred eeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCchhHHHHHHHcCCeEeecccCCCCCCCee-eeEEEEEEEcCeEEEEecC
Q psy17074 581 GRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGT-CAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 581 ~~v~~~~L~rIa~~tGa~ii~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~ 632 (632)
+++++.+|+|||++|||+++++++++++++||+ |++|++.++|+++|+||+|
T Consensus 318 ~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g 370 (590)
T 3p9d_C 318 RRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDN 370 (590)
T ss_dssp CCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC
T ss_pred ccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeC
Confidence 999999999999999999999999999999999 9999999999999999986
No 17
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.3e-57 Score=503.98 Aligned_cols=294 Identities=25% Similarity=0.396 Sum_probs=276.6
Q ss_pred ccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHHhccccc--
Q psy17074 335 TENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEI-- 412 (632)
Q Consensus 335 ~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~q~~~~-- 412 (632)
.+..+|.+++.+|+.||++|+++|||||||+||||||++++|+++|||||+|||++|+++||+|+|++++|++||+++
T Consensus 3 ~~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GD 82 (517)
T 3iyg_Z 3 AEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGD 82 (517)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCC
Confidence 355688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ------------------------ccC----------------------CchhhHHHHHHHHhhhcCCccccchhhHHHH
Q psy17074 413 ------------------------QKS----------------------DSGEYRGLLEKCAATALSSKLIHQQKGFFSK 446 (632)
Q Consensus 413 ------------------------~~~----------------------~~~~~~~~L~~va~t~l~sK~~~~~~~~l~~ 446 (632)
+|. ....+++.|.++|+|+++||+.+.+.++|++
T Consensus 83 GTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~ 162 (517)
T 3iyg_Z 83 GTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTE 162 (517)
T ss_pred CceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHH
Confidence 110 0111578899999999999999999999999
Q ss_pred HHHHHHHHhcc---cCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccchhhhccCCce
Q psy17074 447 MVVDAVMSLDD---LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAERDNAE 523 (632)
Q Consensus 447 li~~A~~~v~~---~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~~~~~~~~ 523 (632)
++++|+..|.+ .+|+++|+|++++||+..||++++||+|+++|.||+ ||++++||||++++++|++++++++++
T Consensus 163 l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~---m~~~ien~kIll~~~~le~~k~e~~~~ 239 (517)
T 3iyg_Z 163 AVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPD---MKKRVEDAYILTCNVSLEYEKTEVNSG 239 (517)
T ss_pred HHHHHhheeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCC---ccccccCCeEEEeccccccccccccee
Confidence 99999999863 478899999999999999999999999999999996 899999999999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCc---------EEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHH
Q psy17074 524 IRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQ---------VVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 594 (632)
Q Consensus 524 v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~---------vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~ 594 (632)
+.++++++++++.++|++++++++++|+..+++ ||||+++|++++++||.++||++++++++++|+|||++
T Consensus 240 ~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leria~~ 319 (517)
T 3iyg_Z 240 FFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLTLA 319 (517)
T ss_pred EEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHHHHH
Confidence 999999999999999999999999999998877 48889999999999999999999999999999999999
Q ss_pred cCCeEeecccCCCCCC-CeeeeEEEEEEEcCeEEEEecC
Q psy17074 595 CGGAVMTTAHDLNDSV-LGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 595 tGa~ii~~l~~l~~~~-lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
|||+++++++++++++ ||+|+ |++.++|+++|+||+|
T Consensus 320 tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g 357 (517)
T 3iyg_Z 320 CGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEK 357 (517)
T ss_pred hCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeC
Confidence 9999999999999999 99999 9999999999999986
No 18
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=9.8e-58 Score=511.21 Aligned_cols=304 Identities=30% Similarity=0.522 Sum_probs=279.9
Q ss_pred chhhhcccC--ccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHH
Q psy17074 326 PQILLLKEG--TENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVD 403 (632)
Q Consensus 326 ~~~~~~~~~--~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~ 403 (632)
+|..+++++ .++.+|.++|.+|+.||+.|+++|||||||+||||||++++|+|+|||||+|||++|+++||+|+|+++
T Consensus 27 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e 106 (562)
T 3p9d_E 27 RPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQ 106 (562)
T ss_dssp ---CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHH
T ss_pred CCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHH
Confidence 455666665 366789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccc--------------------------------------------------ccCCch-h--hHHHHHHHHhh
Q psy17074 404 IAKSQDAEI--------------------------------------------------QKSDSG-E--YRGLLEKCAAT 430 (632)
Q Consensus 404 ~a~~q~~~~--------------------------------------------------~~~~~~-~--~~~~L~~va~t 430 (632)
+|++||+++ .+++.. . .++.|.++|+|
T Consensus 107 ~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~t 186 (562)
T 3p9d_E 107 LSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKT 186 (562)
T ss_dssp HHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHH
T ss_pred HHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHH
Confidence 999999999 011111 1 13789999999
Q ss_pred hcCCccccchhhHHHHHHHHHHHHhcc----cCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceee-----
Q psy17074 431 ALSSKLIHQQKGFFSKMVVDAVMSLDD----LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTY----- 501 (632)
Q Consensus 431 ~l~sK~~~~~~~~l~~li~~A~~~v~~----~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~----- 501 (632)
+++||+++.+.++|++++++|+..|.+ ++|+++|+|++++||++.||++++||+|+++|.||+ ||+..
T Consensus 187 Sl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~---m~~~~~~~~~ 263 (562)
T 3p9d_E 187 SLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQ---MPKCVLPKEG 263 (562)
T ss_dssp HHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTS---CCC-----TT
T ss_pred hcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCC---cCcccccccc
Confidence 999999999999999999999999864 578899999999999999999999999999999997 57777
Q ss_pred -cCceEEEecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEE
Q psy17074 502 -KNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCA 580 (632)
Q Consensus 502 -~n~kIll~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v 580 (632)
+|++|++++|+|++.+++.++++.++++++++++.++|++++++++++|++.|+|||||+++|++++++||.++||+++
T Consensus 264 ~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v 343 (562)
T 3p9d_E 264 SDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAV 343 (562)
T ss_dssp CSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCE
T ss_pred cccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCchhHHHHHHHcCCeEeecccCCCCCCCeeeeEEEEEEEcC--eEEEEecC
Q psy17074 581 GRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGS--ERDTLNRE 632 (632)
Q Consensus 581 ~~v~~~~L~rIa~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~--~~~~~~~~ 632 (632)
+++++++|+|||++|||+++++++++++++||+|++|++.++|+ ++|+||+|
T Consensus 344 ~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g 397 (562)
T 3p9d_E 344 RWVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQ 397 (562)
T ss_dssp ECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECC
T ss_pred eccCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEec
Confidence 99999999999999999999999999999999999999999995 89999975
No 19
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.8e-57 Score=499.60 Aligned_cols=294 Identities=23% Similarity=0.371 Sum_probs=276.8
Q ss_pred cCccccCC-chhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHHhcccc
Q psy17074 333 EGTENSQG-KPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAE 411 (632)
Q Consensus 333 ~~~~~~~~-~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~q~~~ 411 (632)
+|+++++| .+++.+|+.||+.|+++|||||||+||||||++++|+|+|||||+|||++|+++||+|+|++++|++||++
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQE 80 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhh
Confidence 47888999 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c--------------------------ccC-------------------------CchhhHHHHHHHHhhhcCCccccch
Q psy17074 412 I--------------------------QKS-------------------------DSGEYRGLLEKCAATALSSKLIHQQ 440 (632)
Q Consensus 412 ~--------------------------~~~-------------------------~~~~~~~~L~~va~t~l~sK~~~~~ 440 (632)
+ +|. ....+++.|.++|+|+++||+.+ +
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~-~ 159 (512)
T 3iyg_Q 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYG-N 159 (512)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCcc-c
Confidence 9 110 01135788999999999999765 7
Q ss_pred hhHHHHHHHHHHHHhcc---cCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccchhhh
Q psy17074 441 KGFFSKMVVDAVMSLDD---LLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKA 517 (632)
Q Consensus 441 ~~~l~~li~~A~~~v~~---~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~~ 517 (632)
+++|++|+++|+.+|++ .+++++|+|.|..||++.||++++||+|+++|.+ ||+.++||+|++++||+++.+
T Consensus 160 ~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~-----~~~~~~n~kI~ll~~~le~~~ 234 (512)
T 3iyg_Q 160 EVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG-----DVTSVKDAKIAVYSCPFDGMI 234 (512)
T ss_pred hHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC-----CCcccccCceEEEeccccccc
Confidence 89999999999999973 4788999999999999999999999999999864 689999999999999999999
Q ss_pred ccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCC
Q psy17074 518 ERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGG 597 (632)
Q Consensus 518 ~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa 597 (632)
++.++++.+++++++.++.++|++++++++++|++.|+|||||+++|++.+++||.++||++|+++++.+|+|||++|||
T Consensus 235 ~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~tGa 314 (512)
T 3iyg_Q 235 TETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGA 314 (512)
T ss_pred ccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 598 AVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 598 ~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
+++++++++++++||+|++|+++++|+++|++|+|
T Consensus 315 ~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~ 349 (512)
T 3iyg_Q 315 TALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKH 349 (512)
T ss_pred EEecccccCCHHHCCcccEEEEEEeCCeEEEEEEc
Confidence 99999999999999999999999999999999975
No 20
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.4e-57 Score=509.33 Aligned_cols=301 Identities=24% Similarity=0.369 Sum_probs=282.0
Q ss_pred hhcccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHHhc
Q psy17074 329 LLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQ 408 (632)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~q 408 (632)
.++++++++.+|.+++.+|+.||++|+++|||||||+||||||++++|+|+|||||+|||++|+++||+|+|++++|++|
T Consensus 4 ~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~q 83 (546)
T 3p9d_F 4 QLLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQ 83 (546)
T ss_dssp CSSCTTEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHH
T ss_pred cccCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHH
Confidence 35778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc--------------------------c------------------------cCCc-hhhHHHHHHHHhhhcCCccc
Q psy17074 409 DAEI--------------------------Q------------------------KSDS-GEYRGLLEKCAATALSSKLI 437 (632)
Q Consensus 409 ~~~~--------------------------~------------------------~~~~-~~~~~~L~~va~t~l~sK~~ 437 (632)
|+++ + +++. ..+++.|.++|+|+++||+.
T Consensus 84 d~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~ 163 (546)
T 3p9d_F 84 DEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVD 163 (546)
T ss_dssp HHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTH
T ss_pred HHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcc
Confidence 9999 0 1110 03578899999999999999
Q ss_pred cchhhHHHHHHHHHHHHhc----ccCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccc
Q psy17074 438 HQQKGFFSKMVVDAVMSLD----DLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIEL 513 (632)
Q Consensus 438 ~~~~~~l~~li~~A~~~v~----~~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~L 513 (632)
+.+.++|++++++|+..|. .++|+++|+|++++||+..||++++||+|++++.||+ ||++++||||++++|+|
T Consensus 164 ~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~---m~~~~en~kIll~~~~L 240 (546)
T 3p9d_F 164 ADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPD---MPTRVKNAYVLILNVSL 240 (546)
T ss_dssp HHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSS---SCSSBCSCCCCEECCCS
T ss_pred hhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEeccccccc---CcceecCceEEEecCcc
Confidence 9999999999999999986 2588899999999999999999999999999999984 89999999999999999
Q ss_pred hhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcC---------C-cEEEEeCCccHHHHHHHHHCCcEEEecC
Q psy17074 514 ELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASG---------A-QVVLSKLPIGDVATQYFADRDMFCAGRV 583 (632)
Q Consensus 514 e~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~g---------v-~vvi~~~~I~~~al~~L~~~~I~~v~~v 583 (632)
+++++++++++.++++++++++.++|+++++++++.|+..+ + .|||++++|++++++||.++||++++++
T Consensus 241 e~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr~v 320 (546)
T 3p9d_F 241 EYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRA 320 (546)
T ss_dssp SSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEECCC
T ss_pred cccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeEecC
Confidence 99999999999999999999999999999999999998754 3 3899999999999999999999999999
Q ss_pred CchhHHHHHHHcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 584 PEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 584 ~~~~L~rIa~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
++.+|+|||++|||+++++++++++++||+|++|+++++|+++|+||+|
T Consensus 321 ~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g 369 (546)
T 3p9d_F 321 KRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTE 369 (546)
T ss_dssp CHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSS
T ss_pred CHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEec
Confidence 9999999999999999999999999999999999999999999999986
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=2.5e-57 Score=505.68 Aligned_cols=300 Identities=31% Similarity=0.452 Sum_probs=283.3
Q ss_pred hhcccCccccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEc-CCCCeEEccChHHHHhhccccChHhHHHHHHHHh
Q psy17074 329 LLLKEGTENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVD-QNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKS 407 (632)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~-~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~ 407 (632)
.+|+++++..+|.++|.+|+.||..|+++|||||||+||||||++ ++|+|+|||||+|||++|+++||+|+|++++|++
T Consensus 4 ~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~~ 83 (527)
T 3p9d_B 4 QIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKV 83 (527)
T ss_dssp CSSCSCEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHHH
T ss_pred ehhcCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred ccccc-----------------------c-cCC-------------------------ch----hhHHHHHHHHhhhcCC
Q psy17074 408 QDAEI-----------------------Q-KSD-------------------------SG----EYRGLLEKCAATALSS 434 (632)
Q Consensus 408 q~~~~-----------------------~-~~~-------------------------~~----~~~~~L~~va~t~l~s 434 (632)
||+++ . ..+ .. .+++.|.++|+|+++|
T Consensus 84 qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~s 163 (527)
T 3p9d_B 84 QDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSS 163 (527)
T ss_dssp HHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTT
T ss_pred hHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhcccc
Confidence 99999 1 111 01 1278999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHhcccCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccch
Q psy17074 435 KLIHQQKGFFSKMVVDAVMSLDDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELE 514 (632)
Q Consensus 435 K~~~~~~~~l~~li~~A~~~v~~~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le 514 (632)
|+.+.|+++|++|+++|+.+|+++.|+++|+|+++.||++.||++++||+||++|.||+ |++++||||++++|+|+
T Consensus 164 K~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~----p~~~~n~kIlll~~~le 239 (527)
T 3p9d_B 164 KILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ----PKRIENAKILIANTTLD 239 (527)
T ss_dssp SGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC----CSCCSSCEEEEECSCSS
T ss_pred CcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCCCC----CeeeecceEEEeccccc
Confidence 99999999999999999999987667789999999999999999999999999999984 78899999999999999
Q ss_pred hhhcc-CCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHH
Q psy17074 515 LKAER-DNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMK 593 (632)
Q Consensus 515 ~~~~~-~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~ 593 (632)
+++++ +++++.+++++++.++.++|++++++++++|++.|++|||++++|++++++||.++||++|+++++.+|+|||+
T Consensus 240 ~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia~ 319 (527)
T 3p9d_B 240 TDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLAL 319 (527)
T ss_dssp CCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHHH
T ss_pred cccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHHH
Confidence 99999 69999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 594 ACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 594 ~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
+|||+++++++++++++||+|+.|++..+|+++|++|+|
T Consensus 320 ~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g 358 (527)
T 3p9d_B 320 VTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSG 358 (527)
T ss_dssp HTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCS
T ss_pred HhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEEC
Confidence 999999999999999999999999999999999999986
No 22
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.5e-55 Score=484.02 Aligned_cols=270 Identities=24% Similarity=0.450 Sum_probs=255.0
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
+++.++++++.+++++++..++++|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||++
T Consensus 235 ~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~ 314 (515)
T 3iyg_G 235 YKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARA 314 (515)
T ss_pred ccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHH
Confidence 34455678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCC-cceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCe
Q psy17074 113 CGGAVMTTAHDLNDSVLGT-CAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHA 191 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~-~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~ 191 (632)
|||+++++++++++++||+ |+.|++.++++++|++|+||+++.+|||+|||+|+++++|+||+++|||+++|+++++++
T Consensus 315 tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ 394 (515)
T 3iyg_G 315 CGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQ 394 (515)
T ss_pred hCCeeeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCChhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccC---CCccc
Q psy17074 192 VVAGGGAIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERD---NAEIR 266 (632)
Q Consensus 192 vvpGGGa~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~---~~~~G 266 (632)
+|||||++|++++.+|++++ ...++ +++++++| ++|||.||++|+ |||+|+.+++.+|++.|. +..+|
T Consensus 395 ivpGGGa~e~~~~~~L~~~~~~~~g~------eq~~i~~~-a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G 467 (515)
T 3iyg_G 395 LVPGGGASEMAVAHALTEKSKAMTGV------EQWPYRAV-AQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWG 467 (515)
T ss_pred EEeCCCHHHHHHHHHHHHHhhccCcH------HHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCcee
Confidence 99999999999999999987 44555 45577888 999999999998 999999999999998774 23489
Q ss_pred cccccccchhHhHHHHhHHHHH---HHHHHhhchhheecccccccccc
Q psy17074 267 LDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQ 311 (632)
Q Consensus 267 ~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~ 311 (632)
||+ .+|+|.||.+.|||||+ +++|++|+++|+++||+|++|..
T Consensus 468 ~d~--~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 513 (515)
T 3iyg_G 468 VNG--ETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSG 513 (515)
T ss_pred eeC--CCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeec
Confidence 999 99999999999999999 99999999999999999999874
No 23
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-54 Score=484.06 Aligned_cols=269 Identities=28% Similarity=0.414 Sum_probs=252.3
Q ss_pred ccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHh
Q psy17074 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKAC 113 (632)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~t 113 (632)
+..++++++.++++++++.+.++|++++++++++|++.|+||||++++|+++|++||.++||++++++++++|+|||++|
T Consensus 238 ~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~t 317 (529)
T 3iyg_A 238 TKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKAS 317 (529)
T ss_pred ccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHh
Confidence 34456889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEeccccCCC------CCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHH
Q psy17074 114 GGAVMTTAHDLN------DSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTI 187 (632)
Q Consensus 114 Ga~ii~~l~~l~------~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~ 187 (632)
||++++++++++ +++||+|+.|+++++++++|++|+||+++++|||+|||+|+++++|+||+++||||++|+++
T Consensus 318 Ga~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v 397 (529)
T 3iyg_A 318 GATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVL 397 (529)
T ss_pred CCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999987654 67899999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeEEecCChhHHHHHHHHhhhcc-CCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccCC---
Q psy17074 188 RNHAVVAGGGAIEMELSKALRDYSG-LGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERDN--- 262 (632)
Q Consensus 188 ~~~~vvpGGGa~e~~ls~~L~~~~~-~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~~--- 262 (632)
+||++||||||+|+++|.+|++++. ..++ +++++++| ++||++||++|| |||+|+.+++.+|++.|..
T Consensus 398 ~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~------eq~~i~~f-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~ 470 (529)
T 3iyg_A 398 ESKSVVPGGGAVEAALSIYLENYATSMGSR------EQLAIAEF-ARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQV 470 (529)
T ss_pred hCCeEEeCCcHHHHHHHHHHHHHhhhcCCh------HHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999983 3455 45677898 999999999998 9999999999999987742
Q ss_pred -------CccccccccccchhHhHHHHhHHHHH---HHHHHhhchhheecccccccccc
Q psy17074 263 -------AEIRLDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQ 311 (632)
Q Consensus 263 -------~~~G~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~ 311 (632)
..+|||. .+|++.||.+.|||||+ +++|++|+++|+++||+|++|..
T Consensus 471 ~~~~~~~~~~G~d~--~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 527 (529)
T 3iyg_A 471 NPERKNLKWIGLDL--VNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKL 527 (529)
T ss_pred ccccccCceeeeeC--CCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcC
Confidence 2479999 99999999999999999 99999999999999999999864
No 24
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.4e-55 Score=482.84 Aligned_cols=270 Identities=52% Similarity=0.826 Sum_probs=255.0
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
+++.++++++.++++++++.++++|++++++++++|++.|+||||++++|++.+++||.++||++++++++.+|+|||++
T Consensus 237 ~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~ 316 (515)
T 3iyg_H 237 LKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMA 316 (515)
T ss_pred ccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHH
Confidence 44456788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeE
Q psy17074 113 CGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAV 192 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~v 192 (632)
|||+++++++++++++||+|+.|++..+++++|++|++|.++.+|||+|||+|+++++|+||+++||||++|++++|+++
T Consensus 317 tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~i 396 (515)
T 3iyg_H 317 CGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSV 396 (515)
T ss_pred hCCEEeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred EecCChhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccCCC--ccccc
Q psy17074 193 VAGGGAIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERDNA--EIRLD 268 (632)
Q Consensus 193 vpGGGa~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~~~--~~G~d 268 (632)
|||||++|++++.+|++++ ...++ +++++++| ++||+.||++|+ |||+|+.+++.+|++.|... .+|||
T Consensus 397 VpGGGa~e~~~s~~L~~~~~~~~g~------eq~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d 469 (515)
T 3iyg_H 397 VAGGGAIEMELSKYLRDYSRTIPGK------QQLLIGAY-AKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVD 469 (515)
T ss_pred ecCCcHHHHHHHHHHHHHHhcCChH------HHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEe
Confidence 9999999999999999987 34555 45577888 999999999998 99999999999999887532 37999
Q ss_pred cccccchhHhHHHHhHHHHH---HHHHHhhchhheecccccccccc
Q psy17074 269 SVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQ 311 (632)
Q Consensus 269 ~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~ 311 (632)
+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|..
T Consensus 470 ~--~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 513 (515)
T 3iyg_H 470 I--NTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKN 513 (515)
T ss_pred C--CCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9 99999999999999999 99999999999999999999864
No 25
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=7.7e-55 Score=486.41 Aligned_cols=275 Identities=28% Similarity=0.437 Sum_probs=257.0
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
+.+.++++++.++++++++.++++|++++++++++|++.|+||||++++|+++|++||.++||++++++++.+|+|||++
T Consensus 241 ~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia~~ 320 (543)
T 3ruv_A 241 IKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKA 320 (543)
T ss_dssp CCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHH
T ss_pred ccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHHHH
Confidence 34556778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeE
Q psy17074 113 CGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAV 192 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~v 192 (632)
|||+++++++++++++||+|++|+++.+++++|++|++|.++..|||+|||+|+++++|+||+++||||++|++++||++
T Consensus 321 tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~i 400 (543)
T 3ruv_A 321 TGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRI 400 (543)
T ss_dssp HCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred hCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCChhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccC---CCcccc
Q psy17074 193 VAGGGAIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERD---NAEIRL 267 (632)
Q Consensus 193 vpGGGa~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~---~~~~G~ 267 (632)
|||||++|++++.+|++++ ...+++ ++++++| ++||+.||++|+ |||+|+.+++.+|++.|. +..+||
T Consensus 401 VpGGGa~e~~~s~~L~~~~~~~~g~e------q~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~ 473 (543)
T 3ruv_A 401 VSGGGSTEVELSMKLREYAEGISGRE------QLAVRAF-ADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGL 473 (543)
T ss_dssp EETTTHHHHHHHHHHHHHHHTCCTTH------HHHHHHH-HHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEE
T ss_pred ecCCcHHHHHHHHHHHHHhhcCChHH------HHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeee
Confidence 9999999999999999988 445554 5577888 999999999998 999999999999998774 234899
Q ss_pred ccccccchhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccccccc
Q psy17074 268 DSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYFADR 316 (632)
Q Consensus 268 d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~~~k 316 (632)
|+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|.+..+..
T Consensus 474 d~--~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~ 523 (543)
T 3ruv_A 474 NV--FTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRG 523 (543)
T ss_dssp CT--TTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC----
T ss_pred eC--CCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCC
Confidence 99 99999999999999999 9999999999999999999998875443
No 26
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-54 Score=481.91 Aligned_cols=268 Identities=24% Similarity=0.393 Sum_probs=252.5
Q ss_pred cccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHhC
Q psy17074 35 KKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACG 114 (632)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~tG 114 (632)
..++++++.++++++++.++++|+++++++++++++.|+||||++++|+++|++||.++||++++++++.+|+|||++||
T Consensus 237 k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tG 316 (515)
T 3iyg_E 237 KPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATG 316 (515)
T ss_pred cccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhC
Confidence 34456889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEeccccCCCCCCCCCcceEEEEEEcc--eEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeE
Q psy17074 115 GAVMTTAHDLNDSVLGTCAVFDERQIGS--ERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAV 192 (632)
Q Consensus 115 a~ii~~l~~l~~~~lG~~~~v~~~~i~~--~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~v 192 (632)
|+++++++++++++||+|++|+++.+|+ ++|++|+||.++.+|||+|||+|+++++|+||+++||||++|+++++|++
T Consensus 317 a~ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~i 396 (515)
T 3iyg_E 317 GRIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRV 396 (515)
T ss_pred CEEecccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999987 89999999999999999999999999999999999999999999999999
Q ss_pred EecCChhHHHHHHHHhhhcc-CCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccC---CCcccc
Q psy17074 193 VAGGGAIEMELSKALRDYSG-LGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERD---NAEIRL 267 (632)
Q Consensus 193 vpGGGa~e~~ls~~L~~~~~-~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~---~~~~G~ 267 (632)
|||||++|++++.+|++++. .+++ +++++++| ++||+.||++|+ |||+|+.+++.+|++.|. +..+||
T Consensus 397 VpGGGa~e~~~~~~L~~~~~~~~g~------~q~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~ 469 (515)
T 3iyg_E 397 VYGGGAAEISCALAVSQEADKCPTL------EQYAMRAF-ADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGI 469 (515)
T ss_pred CCCCcHHHHHHHHHHHHHhccCCcH------HHHHHHHH-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeE
Confidence 99999999999999999874 3555 45577888 999999999998 999999999999998764 234899
Q ss_pred ccccccchhHhHHHHhHHHHH---HHHHHhhchhheecccccccccc
Q psy17074 268 DSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQ 311 (632)
Q Consensus 268 d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~ 311 (632)
|+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|..
T Consensus 470 d~--~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 470 DC--LHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred ec--CCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 99 99999999999999999 99999999999999999999863
No 27
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=2.6e-54 Score=479.53 Aligned_cols=266 Identities=22% Similarity=0.348 Sum_probs=252.9
Q ss_pred ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHhCCEE
Q psy17074 38 KEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAV 117 (632)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~tGa~i 117 (632)
+++++.+++++++..++++|++++.+++++|++.|+||||++++|+++|++||.++||++++++++.+|+|||++|||++
T Consensus 239 ~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~i 318 (513)
T 3iyg_B 239 FGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEI 318 (513)
T ss_pred cCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCEE
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeEEecCC
Q psy17074 118 MTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGG 197 (632)
Q Consensus 118 i~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~vvpGGG 197 (632)
+++++++++++||+|++|+++.+++++|++|+||.++++|||+|||+|+++++|+||+++||||++|++++|+++|||||
T Consensus 319 i~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGG 398 (513)
T 3iyg_B 319 ASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGG 398 (513)
T ss_pred ecccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred hhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccCC--Ccccccccccc
Q psy17074 198 AIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERDN--AEIRLDSVEEY 273 (632)
Q Consensus 198 a~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~~--~~~G~d~~~~~ 273 (632)
++|++++.+|++++ +..++ +++++++| ++||+.||++|+ |||+|+.+++.+|++.|.. ..+|||+ .+
T Consensus 399 a~e~~~~~~L~~~~~~~~g~------~q~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~--~~ 469 (513)
T 3iyg_B 399 CSEMLMAHAVTQLASRTPGK------EAVAMESY-AKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDM--KE 469 (513)
T ss_pred HHHHHHHHHHHHHhhccCcH------HHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecC--CC
Confidence 99999999999987 34555 45577888 999999999998 9999999999999987743 2489999 99
Q ss_pred chhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccc
Q psy17074 274 QKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQY 312 (632)
Q Consensus 274 ~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~ 312 (632)
|+|.||.+.|||||+ +++|++|+++|+++||+|++|...
T Consensus 470 g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~ 511 (513)
T 3iyg_B 470 GTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAA 511 (513)
T ss_pred CCccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999 999999999999999999999763
No 28
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.6e-54 Score=477.30 Aligned_cols=267 Identities=22% Similarity=0.397 Sum_probs=251.9
Q ss_pred ccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEE-----ecCcChhHHHHHHHCCceEEEeCCchhHHHHH
Q psy17074 36 KKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLS-----KLPIGDVATQYFADRDMFCAGRVPEEDLKRTM 110 (632)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~-----~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia 110 (632)
.++++++.++++++++.++++|++++.+++++|++.|+||||+ +++|+++|++||.++||++++++++.+|+|||
T Consensus 237 ~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia 316 (518)
T 3iyg_D 237 TDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFIC 316 (518)
T ss_pred cccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHH
Confidence 3467789999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HHhCCEEeccccCCCCCCCCCcceEEEEEEcc-eEEEEEeccCC-CceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHh
Q psy17074 111 KACGGAVMTTAHDLNDSVLGTCAVFDERQIGS-ERFNVFSGCKN-ARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIR 188 (632)
Q Consensus 111 ~~tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~-~~~~~~~~~~~-~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~ 188 (632)
++|||+++++++++++++||+|+.|+++++++ ++|++|++|++ +++|||+|||+|+++++|+||+++||||++|++++
T Consensus 317 ~~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~ 396 (518)
T 3iyg_D 317 KTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVK 396 (518)
T ss_pred HHhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 79999999988 89999999999999999999999999999999999
Q ss_pred CCeEEecCChhHHHHHHHHhhhcc-CCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccCC--Cc
Q psy17074 189 NHAVVAGGGAIEMELSKALRDYSG-LGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERDN--AE 264 (632)
Q Consensus 189 ~~~vvpGGGa~e~~ls~~L~~~~~-~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~~--~~ 264 (632)
+|++|||||++|++++.+|++++. ..++ +++++++| ++||+.||++|+ |||+|+.+++.+|++.|.. ..
T Consensus 397 ~~~iVpGGGa~e~~~~~~L~~~~~~~~g~------~q~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~ 469 (518)
T 3iyg_D 397 KRALIAGGGAPEIELALRLTEYSRTLSGM------ESYCIRAF-ADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT 469 (518)
T ss_pred CCCEeecCcHHHHHHHHHHHHHhhcCChH------HHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCc
Confidence 999999999999999999999873 4555 45577888 999999999998 9999999999999987643 34
Q ss_pred cccccccccchhHhHHHHhHHHHH---HHHHHhhchhheecccccccccc
Q psy17074 265 IRLDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQ 311 (632)
Q Consensus 265 ~G~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~ 311 (632)
+|||+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|+||..
T Consensus 470 ~G~d~--~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 517 (518)
T 3iyg_D 470 TGINV--RKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNT 517 (518)
T ss_pred eeEeC--CCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEec
Confidence 89999 99999999999999999 99999999999999999999864
No 29
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=4.3e-55 Score=484.31 Aligned_cols=275 Identities=25% Similarity=0.436 Sum_probs=228.1
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
++..++++++.++++++++.++++|++++++++++|++.|+||||++++|+++|++||.++||++++++++++|+|||++
T Consensus 199 ~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~ 278 (500)
T 3aq1_B 199 FRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKV 278 (500)
T ss_dssp C-------------------------CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHH
T ss_pred ccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHH
Confidence 34456688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeE
Q psy17074 113 CGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAV 192 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~v 192 (632)
|||+++++++++++++||+|++|+++++++++|++|+||.++++|||+|||+|+.+++|+||+++|||+++|+++++|++
T Consensus 279 tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~i 358 (500)
T 3aq1_B 279 TGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKV 358 (500)
T ss_dssp HCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEEEEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEE
T ss_pred hCCeEecccccCCHhHCCCceEEEEEEecCeEEEEEECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCChhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccCC--Cccccc
Q psy17074 193 VAGGGAIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERDN--AEIRLD 268 (632)
Q Consensus 193 vpGGGa~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~~--~~~G~d 268 (632)
|||||++|++++.+|++++ ...++ +++++++| ++||+.||++|+ |||+|+.+++.+|++.|.+ ..+|||
T Consensus 359 VpGGGa~e~~~~~~L~~~~~~~~g~------~q~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d 431 (500)
T 3aq1_B 359 VVGGGSSEVELSLRLSEYASTLKGR------EQLAVSKF-AEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLN 431 (500)
T ss_dssp EETTTHHHHHHHHHHHHHHHTCCSH------HHHHHHHH-HHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEEC
T ss_pred CCCCcHHHHHHHHHHHHHhhhcCch------HHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEe
Confidence 9999999999999999998 44555 45577888 999999999998 9999999999999987643 248999
Q ss_pred cccccchhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccccccc
Q psy17074 269 SVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYFADR 316 (632)
Q Consensus 269 ~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~~~k 316 (632)
+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|....+.+
T Consensus 432 ~--~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 480 (500)
T 3aq1_B 432 V--YTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSAN 480 (500)
T ss_dssp T--TTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-----------
T ss_pred C--CCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCC
Confidence 9 99999999999999999 9999999999999999999999875443
No 30
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=8.4e-55 Score=487.22 Aligned_cols=271 Identities=25% Similarity=0.398 Sum_probs=255.3
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
++..++++++.++++++++.++++|++++++++++|++.|+||||++++|+++|++||.++||++++++++.+|+|||++
T Consensus 253 ~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~ 332 (559)
T 3p9d_A 253 KARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIARA 332 (559)
T ss_dssp CCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHHHHHH
T ss_pred ccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHHHHHH
Confidence 34456688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccc------cCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHH
Q psy17074 113 CGGAVMTTA------HDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRT 186 (632)
Q Consensus 113 tGa~ii~~l------~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a 186 (632)
|||++++++ +++++++||+|++|+++.+++++|++|+||.++++|||+|||+|+++++|+||+++||||++|++
T Consensus 333 TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~a 412 (559)
T 3p9d_A 333 TGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRT 412 (559)
T ss_dssp SSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeEEecCChhHHHHHHHHhhhcc-CCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccC--C
Q psy17074 187 IRNHAVVAGGGAIEMELSKALRDYSG-LGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERD--N 262 (632)
Q Consensus 187 ~~~~~vvpGGGa~e~~ls~~L~~~~~-~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~--~ 262 (632)
+++|++|||||++|++++.+|++++. ..++ +++++++| ++||+.||++|+ |||+|+.+++.+|++.|. +
T Consensus 413 v~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~------eq~~i~~~-a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~ 485 (559)
T 3p9d_A 413 LESGNVVPGGGCVEAALNIYLDNFATTVGSR------EQLAIAEF-AAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQ 485 (559)
T ss_dssp HTSSCEECTTTTHHHHHHHHHHHHHTTSCTT------HHHHHHHH-HHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTS
T ss_pred hhcCCEEeCccHHHHHHHHHHHHHhcccChH------HHHHHHHH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccc
Confidence 99999999999999999999999973 4555 45577888 999999999998 999999999999998763 1
Q ss_pred C------------ccccccccccchhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccc
Q psy17074 263 A------------EIRLDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQY 312 (632)
Q Consensus 263 ~------------~~G~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~ 312 (632)
. .+|||+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|...
T Consensus 486 ~~~~~~~~~~~~~~~G~d~--~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~ 548 (559)
T 3p9d_A 486 MAKPEDVKRRSYRNYGLDL--IRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVD 548 (559)
T ss_dssp CCC----CCCCCCCEEECT--TSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECC
T ss_pred cccccccccccccceeEEC--CCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcC
Confidence 1 479999 99999999999999999 999999999999999999999875
No 31
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.2e-54 Score=476.48 Aligned_cols=268 Identities=22% Similarity=0.383 Sum_probs=252.2
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCc---------EEEEecCcChhHHHHHHHCCceEEEeCCc
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQ---------VVLSKLPIGDVATQYFADRDMFCAGRVPE 103 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~---------lvi~~~~I~~~al~~l~~~~I~~~~~v~~ 103 (632)
+++.++++++.++++++++.++++|++++...+++|+..+++ |||++++|+++|++||.++||++++++++
T Consensus 231 ~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~ 310 (517)
T 3iyg_Z 231 YEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKR 310 (517)
T ss_pred ccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCH
Confidence 445567889999999999999999999999999999999887 48899999999999999999999999999
Q ss_pred hhHHHHHHHhCCEEeccccCCCCCC-CCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHH
Q psy17074 104 EDLKRTMKACGGAVMTTAHDLNDSV-LGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMI 182 (632)
Q Consensus 104 ~~l~~ia~~tGa~ii~~l~~l~~~~-lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~ 182 (632)
.+|+|||++|||+++++++++++++ ||+|+ |++.++++++|++|++|.++..|||+|||+|+++++|+||+++||||+
T Consensus 311 ~~leria~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~ 389 (517)
T 3iyg_Z 311 RNMERLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRA 389 (517)
T ss_pred HHHHHHHHHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 99999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeEEecCChhHHHHHHHHhhhcc-CCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhcc
Q psy17074 183 VRRTIRNHAVVAGGGAIEMELSKALRDYSG-LGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAER 260 (632)
Q Consensus 183 ~~~a~~~~~vvpGGGa~e~~ls~~L~~~~~-~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~ 260 (632)
+|++++||++|||||++|+++|.+|++++. .+++ +++++++| ++||+++|++|| |||+|+.+++.+|++.|
T Consensus 390 ~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~------eq~~i~~~-a~ALe~iP~~La~NaG~d~~~~v~~l~~~h 462 (517)
T 3iyg_Z 390 VKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGR------AQLGVQAF-ADALLIIPKVLAQNSGFDLQETLVKVQAEH 462 (517)
T ss_pred HHHHHhcceEecCccHHHHHHHHHHHHHhccCCHH------HHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999984 4555 45577888 999999999998 99999999999999887
Q ss_pred C--CCccccccccccchhHhHHHHhHHHHH---HHHHHhhchhheeccccccccc
Q psy17074 261 D--NAEIRLDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVAT 310 (632)
Q Consensus 261 ~--~~~~G~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~ 310 (632)
. +..+|||+ .+|+|+||.+.|||||+ +++|++|+++|+++|++|++|.
T Consensus 463 ~~~~~~~G~d~--~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~ 515 (517)
T 3iyg_Z 463 SESGQLVGVDL--NTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMR 515 (517)
T ss_pred hcCCCcEEEeC--CCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4 33489999 99999999999999999 9999999999999999999985
No 32
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=2.7e-54 Score=483.93 Aligned_cols=276 Identities=19% Similarity=0.290 Sum_probs=246.9
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
+.+.++++++.++++++++.++++|++++++++++|++.|+||||++++|+++|++||.++||++++++++.+|+|||++
T Consensus 256 ~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~v~~~~leria~~ 335 (568)
T 3p9d_H 256 IANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCRV 335 (568)
T ss_dssp SCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECCCCHHHHHHHHHH
T ss_pred ccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEecCCHHHHHHHHHH
Confidence 44556788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccC--CCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHh--
Q psy17074 113 CGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCK--NARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIR-- 188 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~--~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~-- 188 (632)
|||+++++++++++++||+|+.|+++.+++++|++|++|. ++++|||+|||+|+++++|+||+++||||++|++++
T Consensus 336 tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~ 415 (568)
T 3p9d_H 336 CGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPS 415 (568)
T ss_dssp HSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred hCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999998 789999999999999999999999999999999999
Q ss_pred CCeEEecCChhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccCC----
Q psy17074 189 NHAVVAGGGAIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERDN---- 262 (632)
Q Consensus 189 ~~~vvpGGGa~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~~---- 262 (632)
|+++|||||++|++++.+|++++ ...++ +++++++| ++||++||++|| |||+|+.+++.+|++.|..
T Consensus 416 d~~iVpGGGa~E~~ls~~L~~~a~~~~g~------eq~~i~~f-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~ 488 (568)
T 3p9d_H 416 GGKLLPGAGATEIELISRITKYGERTPGL------LQLAIKQF-AVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPG 488 (568)
T ss_dssp CCCCCCTTTHHHHHHHHHHHHHHHTCCST------HHHHHHHH-HHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCC
T ss_pred CCeEEeCCcHHHHHHHHHHHHHhccCCcH------HHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhccc
Confidence 88999999999999999999997 44555 45577898 999999999998 9999999999999998743
Q ss_pred ------Cccccccccccch---hHhHHHHhHHHHH---HHHHHhhchhheecccccccccccccccc
Q psy17074 263 ------AEIRLDSVEEYQK---VVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYFADRV 317 (632)
Q Consensus 263 ------~~~G~d~~~~~~~---~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~~~k~ 317 (632)
..+|||+ .+|+ |+||.+.|||||+ +++|++|+++|+++||||++|....+..+
T Consensus 489 ~~~~~~~~~G~d~--~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~ 553 (568)
T 3p9d_H 489 AVKTDHLYKGVDI--DGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGP 553 (568)
T ss_dssp CCCCTTSSSCCCH--HHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC---------------
T ss_pred ccccCCCceeEcc--cCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCC
Confidence 2479999 9998 9999999999999 99999999999999999999988755544
No 33
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.6e-54 Score=484.20 Aligned_cols=275 Identities=27% Similarity=0.460 Sum_probs=255.6
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
++..+.++++.++++++++.++++|++++++++++|++.|+||||++++|+++|++||.++||++++++++++|+|||++
T Consensus 246 ~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le~ia~~ 325 (543)
T 1a6d_B 246 IKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKA 325 (543)
T ss_dssp CCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHH
T ss_pred cccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHHHHHHH
Confidence 44566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeE
Q psy17074 113 CGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAV 192 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~v 192 (632)
|||+++++++++++++||+|+.|+++.+++++|++|+||.++++|||+|||+|+.+++|+||+++|||+++|+++++|++
T Consensus 326 tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~i 405 (543)
T 1a6d_B 326 TGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAY 405 (543)
T ss_dssp HTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred hCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCChhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccCC--Cccccc
Q psy17074 193 VAGGGAIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERDN--AEIRLD 268 (632)
Q Consensus 193 vpGGGa~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~~--~~~G~d 268 (632)
|||||++|++++.+|++++ ...++ +++++++| ++||+.||++|+ |||+|+.+++.+|++.|.+ ..+|||
T Consensus 406 vpGGGa~e~~~s~~L~~~~~~~~g~------~q~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d 478 (543)
T 1a6d_B 406 AAGGGATAAEIAFRLRSYAQKIGGR------QQLAIEKF-ADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGIN 478 (543)
T ss_dssp EETTTHHHHHHHHHHHHHHHHTCSS------HHHHHHHH-HHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEE
T ss_pred cCCccHHHHHHHHHHHHHhhhcCCh------HHHHHHHH-HHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEe
Confidence 9999999999999999998 34555 45577888 999999999998 9999999999999987642 348999
Q ss_pred cccccchhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccccccc
Q psy17074 269 SVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYFADR 316 (632)
Q Consensus 269 ~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~~~k 316 (632)
+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|....+.+
T Consensus 479 ~--~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~ 527 (543)
T 1a6d_B 479 V--FTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSS 527 (543)
T ss_dssp T--TTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC------
T ss_pred C--CCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCC
Confidence 9 99999999999999999 9999999999999999999999875433
No 34
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.8e-54 Score=482.08 Aligned_cols=273 Identities=32% Similarity=0.512 Sum_probs=254.9
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
++..+.++++.++++++++.++++|++++++++++|++.|+||||++++|+++|++||.++||++++++++++|+|||++
T Consensus 245 ~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~ 324 (545)
T 1a6d_A 245 IKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKA 324 (545)
T ss_dssp CCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHHHHH
T ss_pred cccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHHHHH
Confidence 45567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeE
Q psy17074 113 CGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAV 192 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~v 192 (632)
|||+++++++++++++||+|++|+++++++++|++|++|.++++|||+|||+|+.+++|+||+++|||+++|+++++|++
T Consensus 325 tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~i 404 (545)
T 1a6d_A 325 TGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKF 404 (545)
T ss_dssp HCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred hCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCChhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccCC--Cccccc
Q psy17074 193 VAGGGAIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERDN--AEIRLD 268 (632)
Q Consensus 193 vpGGGa~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~~--~~~G~d 268 (632)
|||||++|++++.+|++++ ...++ +++++++| ++||+.||++|+ |||+|+.+++.+|++.|.+ ..+|||
T Consensus 405 VpGGGa~e~~~~~~L~~~~~~~~g~------~q~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d 477 (545)
T 1a6d_A 405 LWGGGAVEAELAMRLAKYANSVGGR------EQLAIEAF-AKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVD 477 (545)
T ss_dssp EETTTHHHHHHHHHHHHHHHTSCHH------HHHHHHHH-HHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEE
T ss_pred EeCcCHHHHHHHHHHHHHhhccCcc------HHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCccee
Confidence 9999999999999999998 34555 45577888 999999999998 9999999999999987642 348999
Q ss_pred cccccchhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccccc
Q psy17074 269 SVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYFA 314 (632)
Q Consensus 269 ~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~~ 314 (632)
+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|....+
T Consensus 478 ~--~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~ 524 (545)
T 1a6d_A 478 L--DNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKS 524 (545)
T ss_dssp T--TTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC-----
T ss_pred c--ccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 9 99999999999999999 99999999999999999999998743
No 35
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=4.9e-55 Score=488.07 Aligned_cols=276 Identities=28% Similarity=0.457 Sum_probs=256.0
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
+.+.++++++.++++++++.++++|++++++++++|++.|+||||++++|+++|++||.++||++++++++.+|+|||++
T Consensus 255 ~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~leria~~ 334 (553)
T 3ko1_A 255 VEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARA 334 (553)
T ss_dssp CCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHHHHHTT
T ss_pred ccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHHHHHHh
Confidence 34456678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeE
Q psy17074 113 CGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAV 192 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~v 192 (632)
|||+++++++++++++||+|+.|+++.+++++|++|+||.++..|||+|||+|+++++|+||+++||||++|+++++|++
T Consensus 335 tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~i 414 (553)
T 3ko1_A 335 TGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADVIKDGRA 414 (553)
T ss_dssp TTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred hCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCChhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccCCC---cccc
Q psy17074 193 VAGGGAIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERDNA---EIRL 267 (632)
Q Consensus 193 vpGGGa~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~~~---~~G~ 267 (632)
|||||++|++++.+|++++ ...+++ ++++++| ++||+.||++|+ |||+|+.+++.+|++.|.+. .+||
T Consensus 415 VpGGGa~e~~~s~~L~~~~~~~~g~e------q~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~ 487 (553)
T 3ko1_A 415 IAGGGAVEIEIAKKLRKYAPQVGGKE------QLAVEAY-ANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGI 487 (553)
T ss_dssp EETTTHHHHHHHHHHHHHHHHHCSHH------HHHHHHH-HHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEE
T ss_pred ecCCceeEeHHHHHHHHhccccCChh------HhHHHHH-HHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeE
Confidence 9999999999999999987 345664 5577888 999999999998 99999999999999887543 3799
Q ss_pred ccccccchhHhHHHHhHHHHH---HHHHHhhchhheecccccccccccccccc
Q psy17074 268 DSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYFADRV 317 (632)
Q Consensus 268 d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~~~k~ 317 (632)
|+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|....+.++
T Consensus 488 d~--~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~ 538 (553)
T 3ko1_A 488 DL--YAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGG 538 (553)
T ss_dssp ET--TTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC------
T ss_pred Ee--ecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccC
Confidence 99 99999999999999999 99999999999999999999998765555
No 36
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.6e-54 Score=482.57 Aligned_cols=273 Identities=30% Similarity=0.482 Sum_probs=257.3
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
++..++++++.++++++++.++++|++++++++++|++.|+||||++++|+++|++||.++||++++++++++|+|||++
T Consensus 248 ~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~ 327 (548)
T 1q3q_A 248 VKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKA 327 (548)
T ss_dssp CCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHH
T ss_pred cccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHHHHHHHH
Confidence 45567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeE
Q psy17074 113 CGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAV 192 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~v 192 (632)
|||+++++++++++++||+|++|+++.+++++|++|++|.++++|||+|||+|+.+++|+||+++|||+++|+++++|++
T Consensus 328 tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~i 407 (548)
T 1q3q_A 328 TGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAV 407 (548)
T ss_dssp HCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEE
T ss_pred hCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCChhHHHHHHHHhhhcc-CCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccCC--Cccccc
Q psy17074 193 VAGGGAIEMELSKALRDYSG-LGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERDN--AEIRLD 268 (632)
Q Consensus 193 vpGGGa~e~~ls~~L~~~~~-~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~~--~~~G~d 268 (632)
|||||++|++++.+|++++. ..++ +++++++| ++||+.||++|+ |||+|+.+++.+|++.|.+ ..+|||
T Consensus 408 vpGGGa~e~~~~~~L~~~~~~~~g~------~q~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d 480 (548)
T 1q3q_A 408 LPAGGAPEIELAIRLDEYAKQVGGK------EALAIENF-ADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGID 480 (548)
T ss_dssp EECTTHHHHHHHHHHHHHHHHHCHH------HHHHHHHH-HHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEE
T ss_pred ccCCcHHHHHHHHHHHHHhhhcCCc------HHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCccee
Confidence 99999999999999999873 3455 45577888 999999999998 9999999999999977632 348999
Q ss_pred cccccchhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccccc
Q psy17074 269 SVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYFA 314 (632)
Q Consensus 269 ~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~~ 314 (632)
+ .+|+|.||.+.|||||+ +++|++|+++|+++||+|++|.....
T Consensus 481 ~--~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~ 527 (548)
T 1q3q_A 481 V--FEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKAT 527 (548)
T ss_dssp T--TTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC-
T ss_pred C--CCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9 99999999999999999 99999999999999999999988643
No 37
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.2e-53 Score=472.27 Aligned_cols=270 Identities=19% Similarity=0.299 Sum_probs=253.0
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
+...|+++++.+++++++..++++|+++++.++++|++.|+||||++++|++.+++||.++||++++++++.+|+|||++
T Consensus 232 ~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~ 311 (512)
T 3iyg_Q 232 GMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKT 311 (512)
T ss_pred cccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHH
Confidence 44556788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccC-CCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCe
Q psy17074 113 CGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCK-NARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHA 191 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~-~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~ 191 (632)
|||+++++++++++++||+|++|++.++|++++++|++|+ ++++|||+|||+|+++++|+||+++||||++|+++++|+
T Consensus 312 tGa~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~ 391 (512)
T 3iyg_Q 312 VGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKR 391 (512)
T ss_pred hCCEEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999996 588999999999999999999999999999999999999
Q ss_pred EEecCChhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccC--CCcccc
Q psy17074 192 VVAGGGAIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERD--NAEIRL 267 (632)
Q Consensus 192 vvpGGGa~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~--~~~~G~ 267 (632)
+|||||++|++++.+|++++ ...+++ ++++++| ++||+.||++|+ |||+|+.+++.+|++.|. +..+||
T Consensus 392 iVpGGGa~e~~~s~~L~~~~~~~~g~e------q~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~ 464 (512)
T 3iyg_Q 392 LVPGGGATEIELAKQITSYGETCPGLE------QYAIKKF-AEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGL 464 (512)
T ss_pred EecCCcHHHHHHHHHHHHHhccCCcHH------HHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEE
Confidence 99999999999999999987 345554 5577888 999999999998 999999999999998764 334899
Q ss_pred ccccccc--hhHhHHHHhHHHHH---HHHHHhhchhheecccccccccc
Q psy17074 268 DSVEEYQ--KVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQ 311 (632)
Q Consensus 268 d~~~~~~--~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~ 311 (632)
|+ .+| +|+||.+.|||||+ +++|++|+++|+++||+|++|..
T Consensus 465 d~--~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 465 DI--EAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511 (512)
T ss_pred ec--CCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheec
Confidence 99 855 99999999999999 99999999999999999999863
No 38
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=3.1e-54 Score=482.88 Aligned_cols=269 Identities=24% Similarity=0.364 Sum_probs=253.3
Q ss_pred ccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHh
Q psy17074 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKAC 113 (632)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~t 113 (632)
...++++++.++++++++.++++|++++++++++|++.|+||||++++|+++|++||.++||++++++++.+|+|||++|
T Consensus 279 ~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v~~v~k~~le~ia~~T 358 (562)
T 3p9d_E 279 PKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVGGQELEHIAIST 358 (562)
T ss_dssp CCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCEECCCTTTHHHHHHHH
T ss_pred cccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHh
Confidence 34456788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEeccccCCCCCCCCCcceEEEEEEcc--eEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCe
Q psy17074 114 GGAVMTTAHDLNDSVLGTCAVFDERQIGS--ERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHA 191 (632)
Q Consensus 114 Ga~ii~~l~~l~~~~lG~~~~v~~~~i~~--~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~ 191 (632)
||+++++++++++++||+|+.|+++.+|+ ++|++|+||.++++|||+|||+|+++++|+||+++||||++|++++||+
T Consensus 359 Ga~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~ 438 (562)
T 3p9d_E 359 NGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSR 438 (562)
T ss_dssp CCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999984 8999999999999999999999999999999999999999999999999
Q ss_pred EEecCChhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccC---CCccc
Q psy17074 192 VVAGGGAIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERD---NAEIR 266 (632)
Q Consensus 192 vvpGGGa~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~---~~~~G 266 (632)
+|||||++|++++.+|++++ ...++ +++++++| ++||+.||++|+ |||+|+.+++.+|++.|. +..+|
T Consensus 439 iVpGGGa~e~~~s~~L~~~~~~~~g~------eq~~i~~~-a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G 511 (562)
T 3p9d_E 439 VVYGGGAAEVTMSLAVSEEADKQRGI------DQYAFRGF-AQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIG 511 (562)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTTCTT------HHHHHHHH-HHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBC
T ss_pred cCCCCcHHHHHHHHHHHHHhccCccH------HHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCcee
Confidence 99999999999999999987 34555 45577888 999999999998 999999999999998663 34589
Q ss_pred cccccccchhHhHHHHhHHHHH---HHHHHhhchhheecccccccccc
Q psy17074 267 LDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQ 311 (632)
Q Consensus 267 ~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~ 311 (632)
||+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|..
T Consensus 512 ~d~--~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 557 (562)
T 3p9d_E 512 VDC--LGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIIS 557 (562)
T ss_dssp CBT--TTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEC
T ss_pred Eec--CCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999 99999999999999999 99999999999999999999875
No 39
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=4.4e-54 Score=481.62 Aligned_cols=269 Identities=25% Similarity=0.428 Sum_probs=249.0
Q ss_pred cccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHhC
Q psy17074 35 KKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACG 114 (632)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~tG 114 (632)
+.++++++.++++++++.++++|++++++++++|++.|++|||++++|+++|++||.++||++|+++++.+|+|||++||
T Consensus 254 K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~~~~k~~le~ia~~TG 333 (590)
T 3p9d_C 254 KGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTG 333 (590)
T ss_dssp CCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCCCCCHHHHHHHHHHHT
T ss_pred ccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeeccCCHHHHHHHHHHhC
Confidence 44568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEeccccCCCCCCCCC-cceEEEEEEcceEEEEEeccCCCce-------------------------------------
Q psy17074 115 GAVMTTAHDLNDSVLGT-CAVFDERQIGSERFNVFSGCKNART------------------------------------- 156 (632)
Q Consensus 115 a~ii~~l~~l~~~~lG~-~~~v~~~~i~~~~~~~~~~~~~~~~------------------------------------- 156 (632)
|+++++++++++++||+ |++|++..+++++|++|+||.++..
T Consensus 334 a~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~ 413 (590)
T 3p9d_C 334 ATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSS 413 (590)
T ss_dssp CCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC-------------------------------------------
T ss_pred CceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999987666
Q ss_pred -------------------EEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeEEecCChhHHHHHHHHhhhc-cCCCc
Q psy17074 157 -------------------CTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYS-GLGDK 216 (632)
Q Consensus 157 -------------------~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~vvpGGGa~e~~ls~~L~~~~-~~~~~ 216 (632)
|||+|||+|+.+++|.||+++||||++|+++++|++|||||++|+++|.+|++++ ..+++
T Consensus 414 ~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~ 493 (590)
T 3p9d_C 414 GALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGI 493 (590)
T ss_dssp --------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCST
T ss_pred HhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChH
Confidence 9999999999999999999999999999999998899999999999999999987 44555
Q ss_pred cccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccC--CCccccccccccchhHhHHHHhHHHHH---HH
Q psy17074 217 VRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERD--NAEIRLDSVEEYQKVVDAEWKILYEKL---DK 290 (632)
Q Consensus 217 ~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~--~~~~G~d~~~~~~~~~d~~~~gI~Dp~---~~ 290 (632)
+++++++| ++||+.||++|+ |||+|+.+++.+|++.|. +..+|||+ .+|+|+||.+.|||||+ ++
T Consensus 494 ------eq~~i~~~-a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~--~~g~~~dm~~~gI~dp~~vk~~ 564 (590)
T 3p9d_C 494 ------QQWPYQAV-ADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDG--DKGKIVDMVSYGIWEPEVIKQQ 564 (590)
T ss_dssp ------THHHHHHH-HHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCT--TSSSCBCTTTTTCCEEHHHHHH
T ss_pred ------HHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeC--CCCeEeehHHcCCeEcHHHHHH
Confidence 45677888 999999999998 999999999999998774 33489999 99999999999999999 99
Q ss_pred HHHhhchhheeccccccccccc
Q psy17074 291 IHASGAQVVLSKLPIGDVATQY 312 (632)
Q Consensus 291 ~l~~a~~va~~~l~~~~ii~~~ 312 (632)
+|++|+++|+++||||++|...
T Consensus 565 al~~A~e~a~~iL~id~ii~~~ 586 (590)
T 3p9d_C 565 SVKTAIESACLLLRVDDIVSGV 586 (590)
T ss_dssp HHHHHHHHHHHTTSEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999866
No 40
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=7.4e-54 Score=478.72 Aligned_cols=272 Identities=43% Similarity=0.723 Sum_probs=256.5
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
+.+.++++++.+++++++..++++|++++.+++++|++.|++|||++++|++.+++||.++||++++++++.+|+|||++
T Consensus 250 ~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~~lerIa~~ 329 (550)
T 3p9d_G 250 LKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDMNRVIQA 329 (550)
T ss_dssp CCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTTHHHHHHHH
T ss_pred cccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHHHHHHHHHH
Confidence 34456788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeE
Q psy17074 113 CGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAV 192 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~v 192 (632)
|||+++++++++++++||+|+.|+++.+++++|++|+||.++++|||+|||+|+++++|+||+++||||++|++++||++
T Consensus 330 tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~i 409 (550)
T 3p9d_G 330 VGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLI 409 (550)
T ss_dssp TCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCE
T ss_pred hCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCChhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccC--CCccccc
Q psy17074 193 VAGGGAIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERD--NAEIRLD 268 (632)
Q Consensus 193 vpGGGa~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~--~~~~G~d 268 (632)
|||||++|++++.+|++++ ..+++ +++++++| ++||+.||++|+ |||+|+.+++.+|++.|. +..+|||
T Consensus 410 VpGGGa~e~~~s~~L~~~~~~~~g~------eq~~i~~~-a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d 482 (550)
T 3p9d_G 410 VAGGGATEMEVSKCLRDYSKTIAGK------QQMIINAF-AKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVV 482 (550)
T ss_dssp EETTTHHHHHHHHHHHHHHHTCCST------THHHHHHH-HHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBC
T ss_pred ccCCCHHHHHHHHHHHHHhhcCChH------HHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeee
Confidence 9999999999999999987 44555 55677888 999999999998 999999999999998762 3358999
Q ss_pred cccccchhHhHHHHhHHHHH---HHHHHhhchhheecccccccccccc
Q psy17074 269 SVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYF 313 (632)
Q Consensus 269 ~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~ 313 (632)
+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|.+..
T Consensus 483 ~--~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~ 528 (550)
T 3p9d_G 483 F--ETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKG 528 (550)
T ss_dssp S--SSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCC
T ss_pred C--CCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCC
Confidence 9 99999999999999999 9999999999999999999998753
No 41
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=4.9e-54 Score=478.41 Aligned_cols=270 Identities=20% Similarity=0.338 Sum_probs=253.9
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCc-----ChhHHHHHHHCCceEEEeCCchhHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPI-----GDVATQYFADRDMFCAGRVPEEDLK 107 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I-----~~~al~~l~~~~I~~~~~v~~~~l~ 107 (632)
+...++++++.++++++++.++++|++++.+++++|++.|+||||++++| +++|++||.++||++++++++.+|+
T Consensus 243 ~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~le 322 (528)
T 3p9d_D 243 PPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIE 322 (528)
T ss_dssp CCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHHH
T ss_pred ccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHHH
Confidence 34456688999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHhCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccC--C-CceEEEEecCCChhhHHHHHHHHHHHHHHHH
Q psy17074 108 RTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCK--N-ARTCTIIVRGGAEQFLEETERSLHDAIMIVR 184 (632)
Q Consensus 108 ~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~--~-~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~ 184 (632)
|||++|||+++++++++++++||+|+.|++..+++++|++|++|. + +++|||+|||+|+++++|+||+++||||++|
T Consensus 323 ~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r 402 (528)
T 3p9d_D 323 FLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIR 402 (528)
T ss_dssp HHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHHH
T ss_pred HHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 6 8999999999999999999999999999999
Q ss_pred HHHhCCeEEecCChhHHHHHHHHhhhcc-CCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccCC
Q psy17074 185 RTIRNHAVVAGGGAIEMELSKALRDYSG-LGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERDN 262 (632)
Q Consensus 185 ~a~~~~~vvpGGGa~e~~ls~~L~~~~~-~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~~ 262 (632)
+++++|++|||||++|++++.+|++++. ..+++ ++++++| ++||+.||++|+ |||+|+.+++.+|++.|..
T Consensus 403 ~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~e------q~~i~~~-a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~ 475 (528)
T 3p9d_D 403 CLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQ------AFIWQEF-ASALEVIPTTLAENAGLNSIKVVTELRSKHEN 475 (528)
T ss_dssp HHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHH------HTTHHHH-HHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCS
T ss_pred HHHhcCCccCCCCHHHHHHHHHHHHHhhccChHH------HHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999873 45554 5567888 999999999998 9999999999999987742
Q ss_pred --CccccccccccchhHhHHHHhHHHHH---HHHHHhhchhheecccccccccc
Q psy17074 263 --AEIRLDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQ 311 (632)
Q Consensus 263 --~~~G~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~ 311 (632)
..+|||+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|..
T Consensus 476 ~~~~~G~d~--~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 527 (528)
T 3p9d_D 476 GELNDGISV--RRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFS 527 (528)
T ss_dssp SSCCCCCCS--SSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBC
T ss_pred cCCccceec--CCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheec
Confidence 3479999 99999999999999999 99999999999999999999863
No 42
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=7.4e-54 Score=477.68 Aligned_cols=266 Identities=24% Similarity=0.368 Sum_probs=252.9
Q ss_pred ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHhCCEE
Q psy17074 38 KEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAV 117 (632)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~tGa~i 117 (632)
+++++.++++++++.++++|++++++++++|++.|+||||++++|++++++||.++||++++++++.+|+|+|++|||++
T Consensus 246 ~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia~~tGa~i 325 (527)
T 3p9d_B 246 FGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLALVTGGEV 325 (527)
T ss_dssp CCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHHHHTCCCC
T ss_pred cCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCEE
Confidence 57788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHHHHHHHhCCeEEecCC
Q psy17074 118 MTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMIVRRTIRNHAVVAGGG 197 (632)
Q Consensus 118 i~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~~~~a~~~~~vvpGGG 197 (632)
+++++++++++||+|+.|+++.+++++|++|+||.++++|||+|||+|+.+++|+||+++||||++|+++++|++|||||
T Consensus 326 v~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGG 405 (527)
T 3p9d_B 326 VSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGG 405 (527)
T ss_dssp CSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTT
T ss_pred ecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhhhc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHHhccC--CCcccccccccc
Q psy17074 198 AIEMELSKALRDYS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELKAERD--NAEIRLDSVEEY 273 (632)
Q Consensus 198 a~e~~ls~~L~~~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~~~~~--~~~~G~d~~~~~ 273 (632)
++|++++.+|++++ ..++++ ++++++| ++||+.||++|+ |||+|+.+++.+|++.|. +..+|||+ .+
T Consensus 406 a~e~~~s~~L~~~~~~~~g~e------q~~i~~~-a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~--~~ 476 (527)
T 3p9d_B 406 CAEMVMSKAVDTEAQNIDGKK------SLAVEAF-ARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDL--NN 476 (527)
T ss_dssp HHHHHHHHHHHHHHHHHCSHH------HHHHHHH-HHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCS--SS
T ss_pred HHHHHHHHHHHHHHhccCcHH------HHHHHHH-HHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEEC--CC
Confidence 99999999999987 345664 5577888 999999999998 999999999999998763 33589999 99
Q ss_pred chhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccc
Q psy17074 274 QKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQY 312 (632)
Q Consensus 274 ~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~ 312 (632)
|+|+||.+.|||||+ +++|++|+++|+++||+|++|.+.
T Consensus 477 g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~ 518 (527)
T 3p9d_B 477 GTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRAR 518 (527)
T ss_dssp TTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC
T ss_pred CCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcC
Confidence 999999999999999 999999999999999999999876
No 43
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=3.4e-53 Score=473.81 Aligned_cols=271 Identities=20% Similarity=0.336 Sum_probs=251.6
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcC---------C-cEEEEecCcChhHHHHHHHCCceEEEeCC
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASG---------A-QVVLSKLPIGDVATQYFADRDMFCAGRVP 102 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g---------~-~lvi~~~~I~~~al~~l~~~~I~~~~~v~ 102 (632)
+++.++++++.++++++++.++++|++++...+++|+..+ + +|||++++|+++|++||.++||+++++++
T Consensus 242 ~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr~v~ 321 (546)
T 3p9d_F 242 YEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRAK 321 (546)
T ss_dssp SCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEECCCC
T ss_pred ccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeEecCC
Confidence 3455678899999999999999999999999999998865 2 39999999999999999999999999999
Q ss_pred chhHHHHHHHhCCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCCceEEEEecCCChhhHHHHHHHHHHHHHH
Q psy17074 103 EEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQFLEETERSLHDAIMI 182 (632)
Q Consensus 103 ~~~l~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~~~i~Dal~~ 182 (632)
+.+|+|||++|||+++++++++++++||+|++|+++.+++++|++|+||.++..|||+|||+|+++++|+||+++||||+
T Consensus 322 ~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~ 401 (546)
T 3p9d_F 322 RRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRA 401 (546)
T ss_dssp HHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeEEecCChhHHHHHHHHhh---hc-cCCCccccCCCCCcceeeeccccccccccccc-CCCCchhhHHHHHH
Q psy17074 183 VRRTIRNHAVVAGGGAIEMELSKALRD---YS-GLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIALLNIELELK 257 (632)
Q Consensus 183 ~~~a~~~~~vvpGGGa~e~~ls~~L~~---~~-~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~~~v~~~l~ 257 (632)
+|++++||++|||||++|+++|.+|++ |+ ..+++ +++++++| ++||+.||++|+ |||+|+.+++.+|+
T Consensus 402 ~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~------eq~~i~~~-a~ALe~ip~~La~NaG~d~~~~v~~l~ 474 (546)
T 3p9d_F 402 VANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGK------TKTGIEAF-AEALLVIPKTLVKNSGFDPLDVLAMVE 474 (546)
T ss_dssp HHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSH------HHHHHHHH-HHHHHHHHHHHHTTTCCTTTTCCHHHH
T ss_pred HHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchH------HHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 999999999999999999999999998 46 44555 45577888 999999999998 99999999999999
Q ss_pred hccC-------CCccccccccccchhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccc
Q psy17074 258 AERD-------NAEIRLDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQY 312 (632)
Q Consensus 258 ~~~~-------~~~~G~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~ 312 (632)
+.|. +..+|||+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|...
T Consensus 475 ~~h~~~~~~~~~~~~G~d~--~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 537 (546)
T 3p9d_F 475 DELDDAQDSDETRYVGVDL--NIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAG 537 (546)
T ss_dssp HHHHHHTTSTTSSCCCCBT--TTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEEC
T ss_pred HHhhhhhcccCCceeeEeC--CCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7763 33489999 99999999999999999 999999999999999999999754
No 44
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.9e-49 Score=436.67 Aligned_cols=259 Identities=34% Similarity=0.493 Sum_probs=179.6
Q ss_pred EEEcCCCCeEEccChHHHHhhccccChHhHHHHHHHHhccccc-------------------------------------
Q psy17074 370 LIVDQNGKSTISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEI------------------------------------- 412 (632)
Q Consensus 370 mI~~~~g~~~ITnDG~tIlk~l~i~hP~akll~~~a~~q~~~~------------------------------------- 412 (632)
||++++|+++|||||+|||++|+++||+|+|++++|++||+++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999
Q ss_pred -------------ccCCchhhHHHHHHHHhhhcCCccccchhhHHHHHHHHHHHHhccc------CC-CCcEEEEEecCC
Q psy17074 413 -------------QKSDSGEYRGLLEKCAATALSSKLIHQQKGFFSKMVVDAVMSLDDL------LP-LNMIGIKKVAGG 472 (632)
Q Consensus 413 -------------~~~~~~~~~~~L~~va~t~l~sK~~~~~~~~l~~li~~A~~~v~~~------~~-~~~I~I~ki~Gg 472 (632)
.+++. .+++.|.++|+|+|+||+.++|+++|++|+++|+.+++++ +| +++|+|++++||
T Consensus 81 A~~~a~~~L~~~s~~v~~-~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~ 159 (500)
T 3aq1_B 81 AAEKCREILETITIAISP-DDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGG 159 (500)
T ss_dssp HHHHHHHHHHHHCEECCT-TCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESS
T ss_pred HHHHHHHHHHHhcCCCCC-CcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCC
Confidence 11211 2478999999999999999999999999999999999742 55 678999999999
Q ss_pred CcccceeEEeEEEecccCCCCCcCCceeecCceEEEecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17074 473 ALEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 552 (632)
Q Consensus 473 ~~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~ 552 (632)
++.||++++||+|+++|.||+ ||++++||||++++++|++++++.++++.++++++++++.++|++++++++++|++
T Consensus 160 ~~~ds~lv~G~v~dk~~~~~~---m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~ 236 (500)
T 3aq1_B 160 SIDDSELIDGLVIDKERSHPN---MPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIA 236 (500)
T ss_dssp CGGGCEEESEEEESCCCSSTT---SCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHT
T ss_pred CccceEEEeeeEEeecCCCCC---CcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999996 68999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 553 SGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 553 ~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
.|+||||++++|++++++||.++||++|+++++++|+|||++|||+++++++++++++||+|++|+++++|+++|+||+|
T Consensus 237 ~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g 316 (500)
T 3aq1_B 237 SGANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTYVTG 316 (500)
T ss_dssp TCCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEEEEE
T ss_pred hCcCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999975
No 45
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=2.7e-45 Score=407.65 Aligned_cols=259 Identities=16% Similarity=0.276 Sum_probs=228.3
Q ss_pred cccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccCh----HhHHHHHHHHhcccc
Q psy17074 336 ENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHP----AAKTLVDIAKSQDAE 411 (632)
Q Consensus 336 ~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP----~akll~~~a~~q~~~ 411 (632)
+..+|.++|.+|+.||..|+++|+|||||+||||||++++|+|+|||||+|||++|+++|| .|+|++++|++||++
T Consensus 4 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (547)
T 1kp8_A 4 DVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDA 83 (547)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccc
Confidence 3457889999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred c--------------------------ccCC---------------------chhhHHHHHHHHhhhcCCccccchhhHH
Q psy17074 412 I--------------------------QKSD---------------------SGEYRGLLEKCAATALSSKLIHQQKGFF 444 (632)
Q Consensus 412 ~--------------------------~~~~---------------------~~~~~~~L~~va~t~l~sK~~~~~~~~l 444 (632)
+ +|.. ...+++.|.++|+++++ ++++|
T Consensus 84 ~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~------~~~~i 157 (547)
T 1kp8_A 84 AGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISAN------SDETV 157 (547)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTT------SCHHH
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhcc------chhHH
Confidence 9 1110 01246789999998854 56899
Q ss_pred HHHHHHHHHHhcccCCCCcEEEEEecCCCcccc-eeEEeEEEecccCCCCCc----CCceeecCceEEEecccchhhhcc
Q psy17074 445 SKMVVDAVMSLDDLLPLNMIGIKKVAGGALEDS-LLVDGVSFKKTFAYAGFE----MQPKTYKNPKIALLNIELELKAER 519 (632)
Q Consensus 445 ~~li~~A~~~v~~~~~~~~I~I~ki~Gg~~~dS-~li~Giv~~~~~~~~~~~----~m~~~~~n~kIll~~~~Le~~~~~ 519 (632)
++|+++|+.+|+.+ +.|+|. .|+++.+| ++++||+|+++|.||||. +|++.++||||+++++++
T Consensus 158 ~~liadAv~~V~~d---g~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~I------ 226 (547)
T 1kp8_A 158 GKLIAEAMDKVGKE---GVITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKI------ 226 (547)
T ss_dssp HHHHHHHHHHHCTT---SEEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEE------
T ss_pred HHHHHHHHHHhCcC---CcEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcC------
Confidence 99999999999754 567776 89999999 999999999999999973 588899999999999974
Q ss_pred CCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHC------CcEEEe-----cCCchhH
Q psy17074 520 DNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR------DMFCAG-----RVPEEDL 588 (632)
Q Consensus 520 ~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~------~I~~v~-----~v~~~~L 588 (632)
++++++ .++++++++.|+||||++++|+++|++||..+ +|+||+ ++++.+|
T Consensus 227 -------s~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~l 288 (547)
T 1kp8_A 227 -------SNIREM-----------LPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAML 288 (547)
T ss_dssp -------CCGGGT-----------HHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHH
T ss_pred -------CCHHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHH
Confidence 455554 35689999999999999999999999999995 579999 5578899
Q ss_pred HHHHHHcCCeEeec-----ccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 589 KRTMKACGGAVMTT-----AHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 589 ~rIa~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
+|||++|||+++++ ++++++++||+|++|++ ++++++||+|
T Consensus 289 e~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g 334 (547)
T 1kp8_A 289 QDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVI---NKDTTTIIDG 334 (547)
T ss_dssp HHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEE---CSSCEEEEEE
T ss_pred HHHHHHhCCeEecccccCCcccCCHHHCCceeEEEE---ccceEEEEcC
Confidence 99999999999996 99999999999999977 5799999974
No 46
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.8e-47 Score=425.73 Aligned_cols=241 Identities=17% Similarity=0.200 Sum_probs=221.5
Q ss_pred HHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCc-----------eEEEeCCchhHHHHHHHhCCEEecc-----ccCC
Q psy17074 61 LYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDM-----------FCAGRVPEEDLKRTMKACGGAVMTT-----AHDL 124 (632)
Q Consensus 61 i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I-----------~~~~~v~~~~l~~ia~~tGa~ii~~-----l~~l 124 (632)
+.++++++++.|+||||++++|+++|++||..|+| |+|+++++++|+|||++|||+++++ ++++
T Consensus 231 l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~ 310 (543)
T 1we3_A 231 LLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENA 310 (543)
T ss_dssp HHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGC
T ss_pred HHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccC
Confidence 45789999999999999999999999999999755 5555999999999999999999995 8999
Q ss_pred CCCCCCCcceEEEEEEcceEEEEEeccCCC-----------------------------------ceEEEEecCCChhhH
Q psy17074 125 NDSVLGTCAVFDERQIGSERFNVFSGCKNA-----------------------------------RTCTIIVRGGAEQFL 169 (632)
Q Consensus 125 ~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-----------------------------------~~~TI~lrG~t~~~l 169 (632)
++++||+|+.| ++++++|++|+||.++ ++|||+|||+|+.++
T Consensus 311 ~~~~LG~a~~v---~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l 387 (543)
T 1we3_A 311 TLSMLGRAERV---RITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETEL 387 (543)
T ss_dssp CGGGCEEEEEE---EECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHH
T ss_pred CHHHCCCceEE---EEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHH
Confidence 99999999999 5578999999998853 789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCeEEecCChhHHHHHHHHhhhcc-CCCccccCCCCCcceeeeccccccccccccc-CCCC
Q psy17074 170 EETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYSG-LGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKI 247 (632)
Q Consensus 170 ~E~~~~i~Dal~~~~~a~~~~~vvpGGGa~e~~ls~~L~~~~~-~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~ 247 (632)
+|+||+++||||++|+++++| +|||||++|++++.+|++++. ..++ +++++++| ++||+.||++|+ |||+
T Consensus 388 ~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~------~q~~i~~~-a~ALe~ip~~La~NaG~ 459 (543)
T 1we3_A 388 KEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGD------EATGAKIV-RRALEEPARQIAENAGY 459 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHH------HHHHHHHH-HHHTTHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCch------HHHHHHHH-HHHHHHHHHHHHHHCCC
Confidence 999999999999999999999 999999999999999999884 3455 45577888 999999999998 9999
Q ss_pred chhhHHHHHHhccCCCccccccccccchhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccccc
Q psy17074 248 ALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYFA 314 (632)
Q Consensus 248 ~~~~v~~~l~~~~~~~~~G~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~~ 314 (632)
|+.+++.+|++.|.+..+|||+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|.+.-+
T Consensus 460 d~~~vv~~l~~~h~~~~~G~d~--~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~ 527 (543)
T 1we3_A 460 EGSVIVQQILAETKNPRYGFNA--ATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPE 527 (543)
T ss_dssp CHHHHHHHHHHCCSCTTEEEET--TTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSC
T ss_pred CHHHHHHHHHHhcCCCCEEEeC--CCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 9999999999877666689999 99999999999999999 99999999999999999999998644
No 47
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=4.6e-47 Score=421.91 Aligned_cols=241 Identities=15% Similarity=0.156 Sum_probs=219.8
Q ss_pred HHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCc-----------eEEEeCCchhHHHHHHHhCCEEecc-----ccCC
Q psy17074 61 LYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDM-----------FCAGRVPEEDLKRTMKACGGAVMTT-----AHDL 124 (632)
Q Consensus 61 i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I-----------~~~~~v~~~~l~~ia~~tGa~ii~~-----l~~l 124 (632)
+.++++++++.|+||||++++|+++|++||..|+| |+|+++++++|+|||++|||+++++ ++++
T Consensus 232 l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~ 311 (547)
T 1kp8_A 232 MLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKA 311 (547)
T ss_dssp THHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTC
T ss_pred HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccC
Confidence 35789999999999999999999999999999876 6666999999999999999999996 9999
Q ss_pred CCCCCCCcceEEEEEEcceEEEEEeccCCC-----------------------------------ceEEEEecCCChhhH
Q psy17074 125 NDSVLGTCAVFDERQIGSERFNVFSGCKNA-----------------------------------RTCTIIVRGGAEQFL 169 (632)
Q Consensus 125 ~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-----------------------------------~~~TI~lrG~t~~~l 169 (632)
++++||+|++| ++++++|++|+||.++ ++|||+|||+|+.++
T Consensus 312 ~~~~LG~a~~v---~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l 388 (547)
T 1kp8_A 312 TLEDLGQAKRV---VINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEM 388 (547)
T ss_dssp CTTTSEEEEEE---EECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHH
T ss_pred CHHHCCceeEE---EEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHH
Confidence 99999999999 5578999999999864 789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCeEEecCChhHHHHHHHHhhhccCCCccccCCCCCcceeeeccccccccccccc-CCCCc
Q psy17074 170 EETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYSGLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIA 248 (632)
Q Consensus 170 ~E~~~~i~Dal~~~~~a~~~~~vvpGGGa~e~~ls~~L~~~~~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~ 248 (632)
+|+||+++||||++|+++++| +|||||++|++++.+|++++..+++ +++++++| ++||+.||++|+ |||+|
T Consensus 389 ~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~g~------~q~~i~~~-a~ALe~ip~~la~NaG~d 460 (547)
T 1kp8_A 389 KEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRGQNAD------QNVGIKVA-LRAMEAPLRQIVLNCGEE 460 (547)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCCSSHH------HHHHHHHH-HHHTTHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhccCch------HHHHHHHH-HHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999 9999999999999999998754444 45577888 999999999998 99999
Q ss_pred hhhHHHHHHhccCCCccccccccccchhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccccccc
Q psy17074 249 LLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYFADR 316 (632)
Q Consensus 249 ~~~v~~~l~~~~~~~~~G~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~~~k 316 (632)
+.+++.+|++. +..+|||+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|++.-+.+
T Consensus 461 ~~~vv~~l~~~--~~~~G~d~--~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 461 PSVVANTVKGG--DGNYGYNA--ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKND 527 (547)
T ss_dssp HHHHHHHHHHS--CTTEEEET--TTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC--
T ss_pred HHHHHHHHHhc--CCCEeEeC--CCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccC
Confidence 99999999865 34589999 99999999999999999 9999999999999999999999874433
No 48
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=2.7e-47 Score=424.02 Aligned_cols=240 Identities=15% Similarity=0.177 Sum_probs=190.9
Q ss_pred HHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCc-----------eEEEeCCchhHHHHHHHhCCEEecc-----ccCC
Q psy17074 61 LYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDM-----------FCAGRVPEEDLKRTMKACGGAVMTT-----AHDL 124 (632)
Q Consensus 61 i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I-----------~~~~~v~~~~l~~ia~~tGa~ii~~-----l~~l 124 (632)
+.++++++++.|+||||++++|+++|++||..|+| |+|+++++++|+|||++|||+++++ ++++
T Consensus 233 l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~ 312 (545)
T 1iok_A 233 MVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENV 312 (545)
T ss_dssp -----------CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC--------------
T ss_pred HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccC
Confidence 34788999999999999999999999999999876 6666999999999999999999996 9999
Q ss_pred CCCCCCCcceEEEEEEcceEEEEEeccCCC-----------------------------------ceEEEEecCCChhhH
Q psy17074 125 NDSVLGTCAVFDERQIGSERFNVFSGCKNA-----------------------------------RTCTIIVRGGAEQFL 169 (632)
Q Consensus 125 ~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-----------------------------------~~~TI~lrG~t~~~l 169 (632)
++++||+|++| ++++++|++|+||.++ ++|||+|||+|+.++
T Consensus 313 ~~~~LG~a~~v---~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l 389 (545)
T 1iok_A 313 TIDMLGRAKKV---SINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEV 389 (545)
T ss_dssp -CTTSEEEEEE---EECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHH
T ss_pred CHHHcCcCcEE---EEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHH
Confidence 99999999999 5578999999999853 789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCeEEecCChhHHHHHHHHhhhccCCCccccCCCCCcceeeeccccccccccccc-CCCCc
Q psy17074 170 EETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYSGLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIA 248 (632)
Q Consensus 170 ~E~~~~i~Dal~~~~~a~~~~~vvpGGGa~e~~ls~~L~~~~~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~ 248 (632)
+|+||+++||||++|+++++| +|||||++|++++.+|++++...++ +++++++| ++||+.||++|+ |||+|
T Consensus 390 ~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~g~------~q~~i~~~-a~ALe~ip~~La~NaG~d 461 (545)
T 1iok_A 390 KERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSGANSD------QDAGIAII-RRALEAPMRQIAENAGVD 461 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCCSSHH------HHHHHHHH-HHHTTHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhccCch------HHHHHHHH-HHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999 9999999999999999988753444 45577888 999999999998 99999
Q ss_pred hhhHHHHHHhccCCCccccccccccchhHhHHHHhHHHHH---HHHHHhhchhheeccccccccccccc
Q psy17074 249 LLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYFA 314 (632)
Q Consensus 249 ~~~v~~~l~~~~~~~~~G~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~~ 314 (632)
+.+++.+|++.| +..+|||+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|++.-+
T Consensus 462 ~~~vv~~l~~~~-~~~~G~d~--~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~ 527 (545)
T 1iok_A 462 GAVVAGKVRESS-DKAFGFNA--QTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPE 527 (545)
T ss_dssp HHHHHHHHHSCC-STTEEEET--TTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC-
T ss_pred HHHHHHHHHhhc-CCCeeEeC--CCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCc
Confidence 999999999776 45589999 99999999999999999 99999999999999999999998744
No 49
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=2.6e-45 Score=406.86 Aligned_cols=258 Identities=19% Similarity=0.272 Sum_probs=168.2
Q ss_pred ccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccChH----hHHHHHHHHhccccc
Q psy17074 337 NSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHPA----AKTLVDIAKSQDAEI 412 (632)
Q Consensus 337 ~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP~----akll~~~a~~q~~~~ 412 (632)
..+|.++|.+|+.||..|+++|||||||+||||||++++|+|+|||||+|||++|+++||+ |+|++++|++||+++
T Consensus 5 ~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e~ 84 (546)
T 3rtk_A 5 IAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVA 84 (546)
T ss_dssp --------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC---
T ss_pred eeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhhh
Confidence 4588999999999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred --------------------------ccCC---------------------chhhHHHHHHHHhhhcCCccccchhhHHH
Q psy17074 413 --------------------------QKSD---------------------SGEYRGLLEKCAATALSSKLIHQQKGFFS 445 (632)
Q Consensus 413 --------------------------~~~~---------------------~~~~~~~L~~va~t~l~sK~~~~~~~~l~ 445 (632)
+|.. ...+++.|.++|+++++ +++|+
T Consensus 85 GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-------~~~i~ 157 (546)
T 3rtk_A 85 GDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-------DQSIG 157 (546)
T ss_dssp ----CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-------CHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-------chHHH
Confidence 1110 01246788999998764 56899
Q ss_pred HHHHHHHHHhcccCCCCcEEEEEecCCCcccceeEEeEEEecccCCCCCc----CCceeecCceEEEecccchhhhccCC
Q psy17074 446 KMVVDAVMSLDDLLPLNMIGIKKVAGGALEDSLLVDGVSFKKTFAYAGFE----MQPKTYKNPKIALLNIELELKAERDN 521 (632)
Q Consensus 446 ~li~~A~~~v~~~~~~~~I~I~ki~Gg~~~dS~li~Giv~~~~~~~~~~~----~m~~~~~n~kIll~~~~Le~~~~~~~ 521 (632)
+++++|+.+|+.+ +.|+|.+.. +...||++++||+|+++|.||||. +|++.++||||+++++++
T Consensus 158 ~liadAv~~V~~d---gvI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kI-------- 225 (546)
T 3rtk_A 158 DLIAEAMDKVGNE---GVITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKV-------- 225 (546)
T ss_dssp HHHHHHHHHSCTT---SEEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEE--------
T ss_pred HHHHHHHHHhccC---CceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCcc--------
Confidence 9999999999754 568887544 455789999999999999999984 689999999999999974
Q ss_pred ceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHCC------cEEEecCC-----chhHHH
Q psy17074 522 AEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRD------MFCAGRVP-----EEDLKR 590 (632)
Q Consensus 522 ~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~------I~~v~~v~-----~~~L~r 590 (632)
++++++. ++++++++.|+|||||+++|++++++||..++ +++|+.+. +.+|+|
T Consensus 226 -----s~~~~l~-----------~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ 289 (546)
T 3rtk_A 226 -----STVKDLL-----------PLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQD 289 (546)
T ss_dssp -----CCSTTTH-----------HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHH
T ss_pred -----CCHHHHH-----------HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHH
Confidence 4555553 45899999999999999999999999999754 68888775 788999
Q ss_pred HHHHcCCeEee-----cccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 591 TMKACGGAVMT-----TAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 591 Ia~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
||++|||++++ +++++++++||+|++|+ ++++++++|+|
T Consensus 290 ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i~~d~~~~i~g 333 (546)
T 3rtk_A 290 MAILTGGQVISEEVGLTLENADLSLLGKARKVV---VTKDETTIVEG 333 (546)
T ss_dssp HHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---ECSSCEEEEEE
T ss_pred HHHHhCCEEeeccccCccccCCHhhCCeeEEEE---EcCCeEEEEcC
Confidence 99999999999 69999999999999997 58999999974
No 50
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.2e-44 Score=402.93 Aligned_cols=257 Identities=20% Similarity=0.276 Sum_probs=226.6
Q ss_pred ccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccCh----HhHHHHHHHHhccccc
Q psy17074 337 NSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHP----AAKTLVDIAKSQDAEI 412 (632)
Q Consensus 337 ~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP----~akll~~~a~~q~~~~ 412 (632)
..+|.++|.+|+.||..|+++|+|||||+||||||++++|+|+|||||+|||++|+++|| +|+|++++|++||+++
T Consensus 5 ~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~ 84 (543)
T 1we3_A 5 LVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVA 84 (543)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhheec
Confidence 457889999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred --------------------------ccCC---------------------chhhHHHHHHHHhhhcCCccccchhhHHH
Q psy17074 413 --------------------------QKSD---------------------SGEYRGLLEKCAATALSSKLIHQQKGFFS 445 (632)
Q Consensus 413 --------------------------~~~~---------------------~~~~~~~L~~va~t~l~sK~~~~~~~~l~ 445 (632)
+|.. ...+++.|.++|+++++ +++|+
T Consensus 85 GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-------~~~i~ 157 (543)
T 1we3_A 85 GDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-------DPEVG 157 (543)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-------CHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-------CHHHH
Confidence 1110 01246788999988753 58899
Q ss_pred HHHHHHHHHhcccCCCCcEEEEEecCCCcccc-eeEEeEEEecccCCCCCc----CCceeecCceEEEecccchhhhccC
Q psy17074 446 KMVVDAVMSLDDLLPLNMIGIKKVAGGALEDS-LLVDGVSFKKTFAYAGFE----MQPKTYKNPKIALLNIELELKAERD 520 (632)
Q Consensus 446 ~li~~A~~~v~~~~~~~~I~I~ki~Gg~~~dS-~li~Giv~~~~~~~~~~~----~m~~~~~n~kIll~~~~Le~~~~~~ 520 (632)
+|+++|+.+|+.+ +.|+|. .|++++|| ++++||+|+++|.||||. +|++.++||||+++++++
T Consensus 158 ~li~dAv~~V~~~---g~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I------- 225 (543)
T 1we3_A 158 KLIADAMEKVGKE---GIITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKV------- 225 (543)
T ss_dssp HHHHHHHHTTCTT---SEEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCB-------
T ss_pred HHHHHHHHHhCcC---CcEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCc-------
Confidence 9999999999754 567776 89999998 999999999999999973 588889999999999974
Q ss_pred CceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHH------CCcEEEe-----cCCchhHH
Q psy17074 521 NAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFAD------RDMFCAG-----RVPEEDLK 589 (632)
Q Consensus 521 ~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~------~~I~~v~-----~v~~~~L~ 589 (632)
++++++ .++++++++.|+||||++++|++++++||.. .+|++|+ ++++++|+
T Consensus 226 ------s~~~~l-----------~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le 288 (543)
T 1we3_A 226 ------SNVREL-----------LPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLK 288 (543)
T ss_dssp ------CCHHHH-----------HHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHH
T ss_pred ------CCHHHH-----------HHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHH
Confidence 466665 3569999999999999999999999999998 4679999 55788999
Q ss_pred HHHHHcCCeEeec-----ccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 590 RTMKACGGAVMTT-----AHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 590 rIa~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
|||++|||+++++ ++++++++||+|+.|++ +++++++|+|
T Consensus 289 ~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g 333 (543)
T 1we3_A 289 DIAAVTGGTVISEELGFKLENATLSMLGRAERVRI---TKDETTIVGG 333 (543)
T ss_dssp HHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEE---CSSCEEEEEE
T ss_pred HHHHHhCCceeeccccCCcccCCHHHCCCceEEEE---EcCEEEEEcC
Confidence 9999999999996 89999999999999976 6799999964
No 51
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=2e-45 Score=409.11 Aligned_cols=259 Identities=16% Similarity=0.255 Sum_probs=197.6
Q ss_pred cccCCchhhHHHHHHHHHHHHHhhhccCCCccceEEEcCCCCeEEccChHHHHhhccccCh----HhHHHHHHHHhcccc
Q psy17074 336 ENSQGKPQLISNINACQAVVDAVRTTLGPRGMDKLIVDQNGKSTISNDGATIMKLLDIVHP----AAKTLVDIAKSQDAE 411 (632)
Q Consensus 336 ~~~~~~~~~~~ni~~~~~la~~vktslGP~G~~kmI~~~~g~~~ITnDG~tIlk~l~i~hP----~akll~~~a~~q~~~ 411 (632)
+..+|.++|.+|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++|| +|+|++++|++||++
T Consensus 5 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 84 (545)
T 1iok_A 5 EVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDE 84 (545)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGG
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccc
Confidence 3457889999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred c--------------------------ccCC---------------------chhhHHHHHHHHhhhcCCccccchhhHH
Q psy17074 412 I--------------------------QKSD---------------------SGEYRGLLEKCAATALSSKLIHQQKGFF 444 (632)
Q Consensus 412 ~--------------------------~~~~---------------------~~~~~~~L~~va~t~l~sK~~~~~~~~l 444 (632)
+ +|.. ...+++.|.++|+++++ ++++|
T Consensus 85 ~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~------~~~~i 158 (545)
T 1iok_A 85 AGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISAN------GESFI 158 (545)
T ss_dssp CSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTT------TCHHH
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcC------CchhH
Confidence 9 1110 01134567777777653 56899
Q ss_pred HHHHHHHHHHhcccCCCCcEEEEEecCCCcccc-eeEEeEEEecccCCCCCc----CCceeecCceEEEecccchhhhcc
Q psy17074 445 SKMVVDAVMSLDDLLPLNMIGIKKVAGGALEDS-LLVDGVSFKKTFAYAGFE----MQPKTYKNPKIALLNIELELKAER 519 (632)
Q Consensus 445 ~~li~~A~~~v~~~~~~~~I~I~ki~Gg~~~dS-~li~Giv~~~~~~~~~~~----~m~~~~~n~kIll~~~~Le~~~~~ 519 (632)
++|+++|+.+|+.+ +.|+|. .|+++.+| ++++||+|+++|.||||. +|++.++||||++++++++
T Consensus 159 ~~li~dAv~~V~~~---g~I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~----- 228 (545)
T 1iok_A 159 GQQIAEAMQRVGNE---GVITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLS----- 228 (545)
T ss_dssp HHHHHHHHHHHCTT---SCCCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBC-----
T ss_pred HHHHHHHHHHhccC---CeEEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcC-----
Confidence 99999999999754 456666 89999999 999999999999999973 5888899999999999854
Q ss_pred CCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeCCccHHHHHHHHHC------CcEEEe-----cCCchhH
Q psy17074 520 DNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADR------DMFCAG-----RVPEEDL 588 (632)
Q Consensus 520 ~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~------~I~~v~-----~v~~~~L 588 (632)
+++++ .++++++++.|+||||++++|+++|++||..+ +|++|+ ++++++|
T Consensus 229 --------~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~l 289 (545)
T 1iok_A 229 --------SLQPM-----------VPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAML 289 (545)
T ss_dssp --------CCCC----------------------CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHH
T ss_pred --------CHHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHH
Confidence 44443 35688999999999999999999999999995 568988 6678899
Q ss_pred HHHHHHcCCeEeec-----ccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 589 KRTMKACGGAVMTT-----AHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 589 ~rIa~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
+|||++|||+++++ ++++++++||+|++|++ ++++|+||+|
T Consensus 290 e~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g 335 (545)
T 1iok_A 290 QDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSI---NKDNTTIVDG 335 (545)
T ss_dssp HHHHHHHTC---------------CTTSEEEEEEEE---CSSCEEEESC
T ss_pred HHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEE---ecCEEEEEeC
Confidence 99999999999996 99999999999999977 5799999975
No 52
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=7.5e-47 Score=419.14 Aligned_cols=240 Identities=15% Similarity=0.168 Sum_probs=210.1
Q ss_pred HHHHHHHHHcCCcEEEEecCcChhHHHHHHHCC------ce-----EEEeCCchhHHHHHHHhCCEEec-----cccCCC
Q psy17074 62 YEKLDKIHASGAQVVLSKLPIGDVATQYFADRD------MF-----CAGRVPEEDLKRTMKACGGAVMT-----TAHDLN 125 (632)
Q Consensus 62 ~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~------I~-----~~~~v~~~~l~~ia~~tGa~ii~-----~l~~l~ 125 (632)
.++++++++.|+||||++++|+++|++||..|+ +. +|++.++.+|+|||++|||++++ ++++++
T Consensus 232 ~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~ 311 (546)
T 3rtk_A 232 LPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENAD 311 (546)
T ss_dssp HHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCC
T ss_pred HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCC
Confidence 567899999999999999999999999999875 23 34566799999999999999999 689999
Q ss_pred CCCCCCcceEEEEEEcceEEEEEeccCCC-----------------------------------ceEEEEecCCChhhHH
Q psy17074 126 DSVLGTCAVFDERQIGSERFNVFSGCKNA-----------------------------------RTCTIIVRGGAEQFLE 170 (632)
Q Consensus 126 ~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-----------------------------------~~~TI~lrG~t~~~l~ 170 (632)
+++||+|++| ++++++|++|+||.++ ++|||+|||+|+.+++
T Consensus 312 ~~~LG~a~~v---~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~ 388 (546)
T 3rtk_A 312 LSLLGKARKV---VVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELK 388 (546)
T ss_dssp TTTSEEEEEE---EECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHH
T ss_pred HhhCCeeEEE---EEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHH
Confidence 9999999999 5789999999998763 4899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCeEEecCChhHHHHHHHHhhhccCCCccccCCCCCcceeeeccccccccccccc-CCCCch
Q psy17074 171 ETERSLHDAIMIVRRTIRNHAVVAGGGAIEMELSKALRDYSGLGDKVRTGHPSDNSFHAISPDGFEMQPKTYK-NPKIAL 249 (632)
Q Consensus 171 E~~~~i~Dal~~~~~a~~~~~vvpGGGa~e~~ls~~L~~~~~~~~~~~~g~~~~~~~~~~~a~ALe~ip~~La-NaG~~~ 249 (632)
|+||+++||||++|+++++| +|||||++|++++.+|++++ .+++ +++++++| ++||+.||++|+ |||+|+
T Consensus 389 E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~-~~g~------eq~~i~~~-a~ALe~ip~~La~NaG~d~ 459 (546)
T 3rtk_A 389 ERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK-LEGD------EATGANIV-KVALEAPLKQIAFNSGLEP 459 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC-CCTT------HHHHHHHH-HHHTTHHHHHHHTTTTCCH
T ss_pred HHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc-cccH------HHHHHHHH-HHHHHHHHHHHHHHcCCCH
Confidence 99999999999999999999 99999999999999999987 5555 45577888 999999999998 999999
Q ss_pred hhHHHHHHhccCCCccccccccccchhHhHHHHhHHHHH---HHHHHhhchhheecccccccccccccccc
Q psy17074 250 LNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKL---DKIHASGAQVVLSKLPIGDVATQYFADRV 317 (632)
Q Consensus 250 ~~v~~~l~~~~~~~~~G~d~~~~~~~~~d~~~~gI~Dp~---~~~l~~a~~va~~~l~~~~ii~~~~~~k~ 317 (632)
.+++.+|++.+ .++|||+ .+|+|+||.+.|||||+ +++|++|+++|+++||+|++|.+.-+.++
T Consensus 460 ~~vv~~l~~~~--~~~G~d~--~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~ 526 (546)
T 3rtk_A 460 GVVAEKVRNLP--AGHGLNA--QTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEK 526 (546)
T ss_dssp HHHHHHHHHSC--TTEECCS--SSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC-----------
T ss_pred HHHHHHHHhhc--CCEeEcC--CCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99999998753 3489999 99999999999999999 99999999999999999999998865554
No 53
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=1.1e-33 Score=271.07 Aligned_cols=156 Identities=25% Similarity=0.449 Sum_probs=137.3
Q ss_pred cccceeEEeEEEecccCCCCCcCCceeecCceEEEecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy17074 474 LEDSLLVDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHAS 553 (632)
Q Consensus 474 ~~dS~li~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~ 553 (632)
++||++++|++|++++.++ +||++++||||++++|+|+++++++++++.++++++++++.++|++++++++++|++.
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~---~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~ 77 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHP---RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQL 77 (178)
T ss_dssp --CCSEEEEEEESCCCSST---TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEEEEeccccCC---CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3689999999999999987 4899999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCCeEeecccCCCCCCCee-eeEEEEEEEcCeEEEEecC
Q psy17074 554 GAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGT-CAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 554 gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ii~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~ 632 (632)
|++||||+++|+|.|++||.++||++++++++++|+|||++|||+++++++++++++||+ |+.|+++++|+++|+||+|
T Consensus 78 g~nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~g 157 (178)
T 1gml_A 78 KPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITD 157 (178)
T ss_dssp CCSEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEE
T ss_pred CCcEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999985
No 54
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=100.00 E-value=2.5e-33 Score=263.54 Aligned_cols=150 Identities=32% Similarity=0.506 Sum_probs=146.7
Q ss_pred EEeEEEecccCCCCCcCCceeecCceEEEecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Q psy17074 480 VDGVSFKKTFAYAGFEMQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQVVL 559 (632)
Q Consensus 480 i~Giv~~~~~~~~~~~~m~~~~~n~kIll~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~vvi 559 (632)
++|++|++++.++ +||++++||||++++|+|+++++++++++.++++++++++.++|++++++++++|++.|++|||
T Consensus 1 i~Gvv~~k~~~~~---~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl 77 (159)
T 1ass_A 1 MSGIVIDKEKVHS---KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVL 77 (159)
T ss_dssp CCCEEESCCCSCT---TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CceEEEecccCCC---CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEE
Confidence 4799999999987 4899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCCeEeecccCCCCCCCeeeeEEEEEEEcCeEEEEecC
Q psy17074 560 SKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGAVMTTAHDLNDSVLGTCAVFDERQIGSERDTLNRE 632 (632)
Q Consensus 560 ~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 632 (632)
|+++|+|.|++||.++||++++++++++|+|||++|||+++++++++++++||+|+.|+++++|+++|+||+|
T Consensus 78 ~~k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g 150 (159)
T 1ass_A 78 CQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMG 150 (159)
T ss_dssp ESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEES
T ss_pred ECCccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986
No 55
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.95 E-value=1.3e-27 Score=228.94 Aligned_cols=135 Identities=24% Similarity=0.519 Sum_probs=115.1
Q ss_pred hccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHH
Q psy17074 33 KKKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKA 112 (632)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~ 112 (632)
++..++++++.++++++++.++++|++++++++++|+++|+||||++++|+|.|++||.++||++++++++.+|+|||++
T Consensus 39 ~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~a 118 (178)
T 1gml_A 39 YKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARA 118 (178)
T ss_dssp CC--------------CHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHH
T ss_pred CccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHH
Confidence 34456788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCEEeccccCCCCCCCCC-cceEEEEEEcceEEEEEeccCCCceEEEEecCCChh
Q psy17074 113 CGGAVMTTAHDLNDSVLGT-CAVFDERQIGSERFNVFSGCKNARTCTIIVRGGAEQ 167 (632)
Q Consensus 113 tGa~ii~~l~~l~~~~lG~-~~~v~~~~i~~~~~~~~~~~~~~~~~TI~lrG~t~~ 167 (632)
|||++++++++++++.||+ |+.|+++.+|+++|++|+||+++.+|||+|||+|.+
T Consensus 119 tGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 119 CGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASHH 174 (178)
T ss_dssp HCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEESSTTSCEEEEEC----
T ss_pred hCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCCCCCEEEEEEECCCcc
Confidence 9999999999999999999 999999999999999999999999999999999975
No 56
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.90 E-value=6.7e-24 Score=199.26 Aligned_cols=121 Identities=35% Similarity=0.588 Sum_probs=115.0
Q ss_pred ccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHh
Q psy17074 34 KKKKKEEEEEEEEPDEYQKVVDAEWKILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKAC 113 (632)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~E~~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~t 113 (632)
+..++++++.++++++++.++++|+++++.++++|+++|+||||++++|+|.|++||.++||++++++++.+|+|||++|
T Consensus 34 ~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~gI~~v~~v~~~dleria~at 113 (159)
T 1ass_A 34 KKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKAT 113 (159)
T ss_dssp CHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHH
T ss_pred cccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECCccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHh
Confidence 34456778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEeccccCCCCCCCCCcceEEEEEEcceEEEEEeccCCC
Q psy17074 114 GGAVMTTAHDLNDSVLGTCAVFDERQIGSERFNVFSGCKNA 154 (632)
Q Consensus 114 Ga~ii~~l~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~ 154 (632)
||++++++++++++.||+|+.|+++.+|+++|++|+||++.
T Consensus 114 Ga~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 114 GAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp TCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC--
T ss_pred CCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCCCc
Confidence 99999999999999999999999999999999999999864
No 57
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.72 E-value=2.7e-17 Score=147.69 Aligned_cols=123 Identities=16% Similarity=0.240 Sum_probs=107.8
Q ss_pred eEEEecccCCCCCc----CCceeecCceEEEecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Q psy17074 482 GVSFKKTFAYAGFE----MQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQV 557 (632)
Q Consensus 482 Giv~~~~~~~~~~~----~m~~~~~n~kIll~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~v 557 (632)
||.|||||.||||. +|...++||+||+++.+ +++.+++.++ ++++++.|.||
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~llP~-----------LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK-------------VSNVRELLPI-----------LEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSE-------------ECCHHHHHHH-----------HHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEeccc-------------ccCHHHHHHH-----------HHHHHHHCCCE
Confidence 89999999999994 47889999999999998 5677777655 99999999999
Q ss_pred EEEeCCccHHHHHHHHHC------CcEEEecC-----CchhHHHHHHHcCCeEeec-----ccCCCCCCCeeeeEEEEEE
Q psy17074 558 VLSKLPIGDVATQYFADR------DMFCAGRV-----PEEDLKRTMKACGGAVMTT-----AHDLNDSVLGTCAVFDERQ 621 (632)
Q Consensus 558 vi~~~~I~~~al~~L~~~------~I~~v~~v-----~~~~L~rIa~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ 621 (632)
+|++++|+.+|+..|..| +++||+.| ++..|++||.+|||++++. +++.+.++||+|++|.+
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~v-- 134 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI-- 134 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEE--
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEE--
Confidence 999999999999999885 57999999 4889999999999999984 67888899999999976
Q ss_pred EcCeEEEEec
Q psy17074 622 IGSERDTLNR 631 (632)
Q Consensus 622 ig~~~~~~~~ 631 (632)
..+..+++.
T Consensus 135 -tkd~TtIv~ 143 (145)
T 1srv_A 135 -TKDETTIVG 143 (145)
T ss_dssp -CSSCEEEEE
T ss_pred -cCCCeEEeC
Confidence 566666654
No 58
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.71 E-value=1.8e-17 Score=155.75 Aligned_cols=128 Identities=16% Similarity=0.218 Sum_probs=111.5
Q ss_pred ceeEEeEEEecccCCCCCc----CCceeecCceEEEecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17074 477 SLLVDGVSFKKTFAYAGFE----MQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHA 552 (632)
Q Consensus 477 S~li~Giv~~~~~~~~~~~----~m~~~~~n~kIll~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~ 552 (632)
.++++||.|||||.||||. +|...++||+||+++.+ +++.+++.++ ++.+.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkK-------------Is~i~~ilP~-----------LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDK-------------ISSLPDLLPL-----------LEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSE-------------ECCHHHHHHH-----------HHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCc-------------cCCHHHHHHH-----------HHHHHH
Confidence 4689999999999999995 48889999999999998 5677777655 899999
Q ss_pred cCCcEEEEeCCccHHHHHHHHHC------CcEEEecCC-----chhHHHHHHHcCCeEeec-----ccCCCCCCCeeeeE
Q psy17074 553 SGAQVVLSKLPIGDVATQYFADR------DMFCAGRVP-----EEDLKRTMKACGGAVMTT-----AHDLNDSVLGTCAV 616 (632)
Q Consensus 553 ~gv~vvi~~~~I~~~al~~L~~~------~I~~v~~v~-----~~~L~rIa~~tGa~ii~~-----l~~l~~~~lG~~~~ 616 (632)
.|.||+|++++|+.+|+..|..| +++||+.|. +..|++||.+|||++++. +++++.++||+|++
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~ 137 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARR 137 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccE
Confidence 99999999999999999999886 589999995 788999999999999984 78889999999999
Q ss_pred EEEEEEcCeEEEEec
Q psy17074 617 FDERQIGSERDTLNR 631 (632)
Q Consensus 617 v~~~~ig~~~~~~~~ 631 (632)
|.+ ..+..+++.
T Consensus 138 v~v---tkd~T~iv~ 149 (194)
T 3m6c_A 138 VVV---SKDDTVIVD 149 (194)
T ss_dssp EEE---CSSCEEEEE
T ss_pred EEE---cCCceEEec
Confidence 976 456666554
No 59
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.68 E-value=1.5e-16 Score=149.88 Aligned_cols=124 Identities=15% Similarity=0.197 Sum_probs=108.2
Q ss_pred EeEEEecccCCCCCc----CCceeecCceEEEecccchhhhccCCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy17074 481 DGVSFKKTFAYAGFE----MQPKTYKNPKIALLNIELELKAERDNAEIRLDSVEEYQKVVDAEWKILYEKLDKIHASGAQ 556 (632)
Q Consensus 481 ~Giv~~~~~~~~~~~----~m~~~~~n~kIll~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~gv~ 556 (632)
+||.|||||.||||. +|...++||+||+++.+ |++.+++.++ ++.+++.+.|
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~ilP~-----------LE~v~~~~rp 68 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKK-------------ISNIRELLPV-----------LEGVAKASKP 68 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEE-------------ECCHHHHHHH-----------HHHHHTSSCC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCc-------------cCCHHHHHHH-----------HHHHHHhCCC
Confidence 599999999999995 47789999999999998 5677777655 9999999999
Q ss_pred EEEEeCCccHHHHHHHHHC------CcEEEecCC-----chhHHHHHHHcCCeEeec-----ccCCCCCCCeeeeEEEEE
Q psy17074 557 VVLSKLPIGDVATQYFADR------DMFCAGRVP-----EEDLKRTMKACGGAVMTT-----AHDLNDSVLGTCAVFDER 620 (632)
Q Consensus 557 vvi~~~~I~~~al~~L~~~------~I~~v~~v~-----~~~L~rIa~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~ 620 (632)
|+|++++|+.+||..|..| +++||+.|. +..|++||.+|||++++. +++++.++||+|++|.+
T Consensus 69 LlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~v- 147 (201)
T 3osx_A 69 LVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVI- 147 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEE-
T ss_pred eEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEE-
Confidence 9999999999999999885 589999996 677999999999999984 78889999999999976
Q ss_pred EEcCeEEEEec
Q psy17074 621 QIGSERDTLNR 631 (632)
Q Consensus 621 ~ig~~~~~~~~ 631 (632)
..+..+++.
T Consensus 148 --tkd~TtIv~ 156 (201)
T 3osx_A 148 --NKDTTTIID 156 (201)
T ss_dssp --CSSCEEEEE
T ss_pred --cCCceEEec
Confidence 456666554
No 60
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.16 E-value=1.2e-11 Score=111.20 Aligned_cols=89 Identities=18% Similarity=0.268 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCc-----------eEEEeCCchhHHHHHHHhCCEEec-----ccc
Q psy17074 59 KILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDM-----------FCAGRVPEEDLKRTMKACGGAVMT-----TAH 122 (632)
Q Consensus 59 ~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I-----------~~~~~v~~~~l~~ia~~tGa~ii~-----~l~ 122 (632)
+.+.+.++++.+.|.+|+|++++|+++|+..|..|++ |+|++.|+..|+|||.+|||++++ +++
T Consensus 40 ~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le 119 (145)
T 1srv_A 40 RELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLE 119 (145)
T ss_dssp HHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGG
T ss_pred HHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccc
Confidence 3578889999999999999999999999999999843 788899999999999999999997 577
Q ss_pred CCCCCCCCCcceEEEEEEcceEEEEEec
Q psy17074 123 DLNDSVLGTCAVFDERQIGSERFNVFSG 150 (632)
Q Consensus 123 ~l~~~~lG~~~~v~~~~i~~~~~~~~~~ 150 (632)
+.+.++||+|++| +++++.++++.|
T Consensus 120 ~~~~~~LG~a~~v---~vtkd~TtIv~G 144 (145)
T 1srv_A 120 NATLSMLGRAERV---RITKDETTIVGG 144 (145)
T ss_dssp GCCGGGCEEEEEE---EECSSCEEEEEE
T ss_pred cCCHhHCCccCEE---EEcCCCeEEeCC
Confidence 8889999999999 889999888875
No 61
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.05 E-value=5.5e-11 Score=112.16 Aligned_cols=89 Identities=15% Similarity=0.170 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCc-----------eEEEeCCchhHHHHHHHhCCEEec-----ccc
Q psy17074 59 KILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDM-----------FCAGRVPEEDLKRTMKACGGAVMT-----TAH 122 (632)
Q Consensus 59 ~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I-----------~~~~~v~~~~l~~ia~~tGa~ii~-----~l~ 122 (632)
+.+.++++++.+.+.||+|++++|+++|+..|.-|++ |+|++.|+..|+|||.+|||++++ +++
T Consensus 53 ~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le 132 (201)
T 3osx_A 53 RELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELE 132 (201)
T ss_dssp HHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGG
T ss_pred HHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccc
Confidence 3578899999999999999999999999999999843 788888999999999999999998 578
Q ss_pred CCCCCCCCCcceEEEEEEcceEEEEEec
Q psy17074 123 DLNDSVLGTCAVFDERQIGSERFNVFSG 150 (632)
Q Consensus 123 ~l~~~~lG~~~~v~~~~i~~~~~~~~~~ 150 (632)
+++.++||+|++| +++++.++++.|
T Consensus 133 ~~~~~~LG~a~~V---~vtkd~TtIv~G 157 (201)
T 3osx_A 133 KATLEDLGQAKRV---VINKDTTTIIDG 157 (201)
T ss_dssp GCCGGGCEEEEEE---EECSSCEEEEEE
T ss_pred cCCHhhCCCccEE---EEcCCceEEecC
Confidence 8899999999999 777777666655
No 62
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.05 E-value=6.9e-11 Score=111.22 Aligned_cols=89 Identities=16% Similarity=0.216 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCcChhHHHHHHHCCc-----------eEEEeCCchhHHHHHHHhCCEEec-----ccc
Q psy17074 59 KILYEKLDKIHASGAQVVLSKLPIGDVATQYFADRDM-----------FCAGRVPEEDLKRTMKACGGAVMT-----TAH 122 (632)
Q Consensus 59 ~~i~~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I-----------~~~~~v~~~~l~~ia~~tGa~ii~-----~l~ 122 (632)
+.+.+.++++.+.|.||+|++++|+++|+..|.-|++ |+|++.|+..|+|||.+|||++++ +++
T Consensus 46 ~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le 125 (194)
T 3m6c_A 46 PDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLR 125 (194)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGG
T ss_pred HHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccc
Confidence 3578889999999999999999999999999999843 788899999999999999999998 578
Q ss_pred CCCCCCCCCcceEEEEEEcceEEEEEec
Q psy17074 123 DLNDSVLGTCAVFDERQIGSERFNVFSG 150 (632)
Q Consensus 123 ~l~~~~lG~~~~v~~~~i~~~~~~~~~~ 150 (632)
+++.++||+|++| .++++.++++.|
T Consensus 126 ~~~~~~LG~a~~v---~vtkd~T~iv~G 150 (194)
T 3m6c_A 126 EVGLEVLGSARRV---VVSKDDTVIVDG 150 (194)
T ss_dssp GCCGGGCEEEEEE---EECSSCEEEEEE
T ss_pred cCCHHHCCCccEE---EEcCCceEEecC
Confidence 8899999999999 777777766655
No 63
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=61.32 E-value=21 Score=30.60 Aligned_cols=51 Identities=12% Similarity=0.040 Sum_probs=38.9
Q ss_pred HHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
.+.+...|+++|||.. |.+-+...|..+||-++......--+-|.....++
T Consensus 58 ~~~l~~~gv~~vi~~~-iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 58 AQIIANNGVKAVIASS-PGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHTTCCEEEECC-SSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHCCCCEEEECC-cCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 5667788999999985 99999999999999999876543334455545444
No 64
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=55.91 E-value=20 Score=31.52 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=41.1
Q ss_pred HHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHhCCE
Q psy17074 63 EKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 116 (632)
Q Consensus 63 ~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~tGa~ 116 (632)
.+.+.|.+.++++|||. +|.+-+...|.++||-++.......-+.|.....++
T Consensus 67 ~~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp CHHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 45666778899999998 599999999999999999866554445555555554
No 65
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=55.25 E-value=21 Score=30.51 Aligned_cols=53 Identities=25% Similarity=0.266 Sum_probs=41.0
Q ss_pred HHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHhCCE
Q psy17074 63 EKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 116 (632)
Q Consensus 63 ~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~tGa~ 116 (632)
...+.|.+.|+++|||. +|.+-+...|..+||-++.......-+.|.....+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 55666778899999999 599999999999999999765544445555555443
No 66
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=54.45 E-value=23 Score=31.14 Aligned_cols=51 Identities=16% Similarity=0.152 Sum_probs=39.2
Q ss_pred HHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
.+.|.+.|+++|||. +|.+-+...|..+||-++......--+-|.....++
T Consensus 69 a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 69 PNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp HHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 566777899999997 699999999999999999876644334455555444
No 67
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=54.21 E-value=23 Score=30.38 Aligned_cols=53 Identities=11% Similarity=0.041 Sum_probs=41.0
Q ss_pred HHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHhCCE
Q psy17074 63 EKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 116 (632)
Q Consensus 63 ~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~tGa~ 116 (632)
...+.|.+.|+++|||.. |.+-+...|..+||-++.......-+.|.....+.
T Consensus 56 ~~~~~l~~~gv~~vi~~~-iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 56 RTAQIIANNGVKAVIASS-PGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp THHHHHHHTTCCEEEECC-SSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEECC-cCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 345667788999999995 99999999999999999866554455555555554
No 68
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=52.43 E-value=25 Score=29.95 Aligned_cols=52 Identities=25% Similarity=0.254 Sum_probs=39.3
Q ss_pred HHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 546 KLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 546 ~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
..+.|.+.|+++|||. .|.+-+...|..+||-++......--+-|.....++
T Consensus 55 ~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 55 LPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 4666778899999998 599999999999999999876543334455444443
No 69
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=50.19 E-value=23 Score=30.13 Aligned_cols=52 Identities=17% Similarity=0.162 Sum_probs=39.4
Q ss_pred HHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCc-hhHHHHHHHhCC
Q psy17074 63 EKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPE-EDLKRTMKACGG 115 (632)
Q Consensus 63 ~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~-~~l~~ia~~tGa 115 (632)
...+.|.+.|+++|||. +|.+-+...|..+||-++..... ..-+.|.....+
T Consensus 58 ~~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 58 NAAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 34566777899999999 59999999999999999986655 444445544444
No 70
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=47.57 E-value=30 Score=34.65 Aligned_cols=53 Identities=8% Similarity=0.043 Sum_probs=42.2
Q ss_pred HHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCC--------------------------chhHHHHHHHhCCE
Q psy17074 64 KLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVP--------------------------EEDLKRTMKACGGA 116 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~--------------------------~~~l~~ia~~tGa~ 116 (632)
-+|+|+.++++|||.....++.....|.+.|||++.--. .+.++.++.++|..
T Consensus 76 n~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 76 NIESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp CHHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred CHHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 368899999999999876677788899999999885321 25678888988864
No 71
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=47.19 E-value=48 Score=28.75 Aligned_cols=49 Identities=14% Similarity=0.045 Sum_probs=35.5
Q ss_pred HHHHHHHcCCcEEEEecCcCh-----hHHHHHHHCCceEEEeCCchhHHHHHHHhCC
Q psy17074 64 KLDKIHASGAQVVLSKLPIGD-----VATQYFADRDMFCAGRVPEEDLKRTMKACGG 115 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~~I~~-----~al~~l~~~~I~~~~~v~~~~l~~ia~~tGa 115 (632)
.++.|-+-.+.|||.+.+.++ ....++..++||.+.--++.+ |..++|-
T Consensus 32 v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~---LG~a~G~ 85 (126)
T 2xzm_U 32 VLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRAS---LGEYLGH 85 (126)
T ss_dssp HHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSHH---HHHHHTC
T ss_pred HHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHH---HHHHHCC
Confidence 355566678999999999975 455778889999986555444 5555653
No 72
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=47.16 E-value=28 Score=29.34 Aligned_cols=51 Identities=8% Similarity=0.038 Sum_probs=38.5
Q ss_pred HHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
.+.+...|+++|||.. |.+-+...|..+||-++......--+-|.....++
T Consensus 55 ~~~l~~~gv~~vi~~~-iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 55 VQSLVSKGVEYLIASN-VGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHTTTCCEEECSS-CCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEECC-CCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 5556788999999984 99999999999999999876543334455544443
No 73
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=46.84 E-value=43 Score=29.07 Aligned_cols=47 Identities=17% Similarity=0.123 Sum_probs=35.6
Q ss_pred HHHHHhcCCcEEEEeCCccH-----HHHHHHHHCCcEEEecCCchhHHHHHHHcC
Q psy17074 547 LDKIHASGAQVVLSKLPIGD-----VATQYFADRDMFCAGRVPEEDLKRTMKACG 596 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I~~-----~al~~L~~~~I~~v~~v~~~~L~rIa~~tG 596 (632)
++.|.+..+.+||++.+.|| ....++..+||..+...++.+|- .++|
T Consensus 33 ~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~LG---~a~G 84 (126)
T 2xzm_U 33 LRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRASLG---EYLG 84 (126)
T ss_dssp HHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSHHHH---HHHT
T ss_pred HHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHHHH---HHHC
Confidence 55566678999999999985 45677888999999877666654 4555
No 74
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=46.76 E-value=27 Score=29.66 Aligned_cols=51 Identities=18% Similarity=0.159 Sum_probs=38.0
Q ss_pred HHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCc-hhHHHHHHHcCC
Q psy17074 546 KLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPE-EDLKRTMKACGG 597 (632)
Q Consensus 546 ~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~-~~L~rIa~~tGa 597 (632)
..+.|...|+++|||. +|.+-+...|..+||-++..... .--+-|.....+
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 4566677899999998 59999999999999999987654 333334444433
No 75
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=42.59 E-value=23 Score=29.87 Aligned_cols=52 Identities=8% Similarity=0.027 Sum_probs=40.2
Q ss_pred HHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHhCCE
Q psy17074 64 KLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 116 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~tGa~ 116 (632)
..+.+.+.|+++|||.. |.+-+...|..+||-++.......-+.|.....++
T Consensus 54 ~~~~l~~~gv~~vi~~~-iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIASN-VGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECSS-CCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECC-CCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 45666788999999985 99999999999999999866554455555555553
No 76
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=41.18 E-value=63 Score=27.66 Aligned_cols=46 Identities=11% Similarity=0.012 Sum_probs=35.3
Q ss_pred HHHHHHhcCCcEEEEeCCccHH-----HHHHHHHCCcEEEecCCchhHHHH
Q psy17074 546 KLDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRT 591 (632)
Q Consensus 546 ~v~~i~~~gv~vvi~~~~I~~~-----al~~L~~~~I~~v~~v~~~~L~rI 591 (632)
.++.|.+..+.+||++.++++. ...++..+||..+...++.+|-+.
T Consensus 28 v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eLG~a 78 (121)
T 2lbw_A 28 VVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQDLGAA 78 (121)
T ss_dssp HHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHHHHHH
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHHHHHH
Confidence 3556667789999999999984 445777899999888877665553
No 77
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=40.86 E-value=58 Score=27.89 Aligned_cols=48 Identities=10% Similarity=-0.038 Sum_probs=35.3
Q ss_pred HHHHHHHcCCcEEEEecCcChh-----HHHHHHHCCceEEEeCCchhHHHHHHHhC
Q psy17074 64 KLDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACG 114 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~~I~~~-----al~~l~~~~I~~~~~v~~~~l~~ia~~tG 114 (632)
.++.|.+-.+.+||++.++++. ...++.++|||.+.--++.+ |..++|
T Consensus 28 v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~g 80 (121)
T 2lbw_A 28 VVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQD---LGAAGA 80 (121)
T ss_dssp HHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHH---HHHHHT
T ss_pred HHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHH---HHHHhC
Confidence 3556666789999999999984 34568889999987666555 445566
No 78
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=40.38 E-value=53 Score=31.46 Aligned_cols=52 Identities=6% Similarity=-0.018 Sum_probs=38.5
Q ss_pred HHHHHHHcCCcEEEEecC-cChhHHHHHHHCCceEEEeC----Cc----hhHHHHHHHhCC
Q psy17074 64 KLDKIHASGAQVVLSKLP-IGDVATQYFADRDMFCAGRV----PE----EDLKRTMKACGG 115 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~~-I~~~al~~l~~~~I~~~~~v----~~----~~l~~ia~~tGa 115 (632)
-+|+|+.+++||||.... .+......|.+.||+++.-- +. +.++.++.++|-
T Consensus 51 n~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~~~g~ 111 (256)
T 2r7a_A 51 SSEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQV 111 (256)
T ss_dssp CHHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999765 46778889999999876531 11 246667777764
No 79
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=39.72 E-value=47 Score=26.36 Aligned_cols=50 Identities=14% Similarity=0.156 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCcEEEEecCcChhHHH----HHHHCCceEEEeCCchhHHHHHHHhCC
Q psy17074 63 EKLDKIHASGAQVVLSKLPIGDVATQ----YFADRDMFCAGRVPEEDLKRTMKACGG 115 (632)
Q Consensus 63 ~~~~~i~~~g~~lvi~~~~I~~~al~----~l~~~~I~~~~~v~~~~l~~ia~~tGa 115 (632)
+.++.+.+-.+.+||.+.++++.... ++..++||.+.--++.+ |..++|-
T Consensus 18 ~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk~e---LG~a~Gk 71 (82)
T 3v7e_A 18 QTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKK---LGKACGI 71 (82)
T ss_dssp HHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHHTC
T ss_pred HHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHH---HHHHhCC
Confidence 34455556678999999999986554 45678999988666555 4555553
No 80
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=38.65 E-value=45 Score=26.49 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=35.4
Q ss_pred HHHHHHhcCCcEEEEeCCccHHHHH----HHHHCCcEEEecCCchhHHHHHHHcCC
Q psy17074 546 KLDKIHASGAQVVLSKLPIGDVATQ----YFADRDMFCAGRVPEEDLKRTMKACGG 597 (632)
Q Consensus 546 ~v~~i~~~gv~vvi~~~~I~~~al~----~L~~~~I~~v~~v~~~~L~rIa~~tGa 597 (632)
.++.+.+..+.+||++.|.++.... ++..+||..+...++.+ |..++|-
T Consensus 19 v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk~e---LG~a~Gk 71 (82)
T 3v7e_A 19 TVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKK---LGKACGI 71 (82)
T ss_dssp HHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHHTC
T ss_pred HHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHH---HHHHhCC
Confidence 3555556678999999999986554 44668999988887765 4455554
No 81
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=38.63 E-value=54 Score=28.67 Aligned_cols=52 Identities=13% Similarity=0.029 Sum_probs=38.5
Q ss_pred HHHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHhCCE
Q psy17074 63 EKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 116 (632)
Q Consensus 63 ~~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~tGa~ 116 (632)
...+.|.+.|+++|||. +|.+-+...|.. ||-++.......-+.+.....+.
T Consensus 70 ~~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 70 FMLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 44566677899999998 599999999999 99999875534444455444443
No 82
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=38.63 E-value=33 Score=32.97 Aligned_cols=52 Identities=12% Similarity=0.110 Sum_probs=38.6
Q ss_pred HHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEe-C-C----chhHHHHHHHhCC
Q psy17074 64 KLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGR-V-P----EEDLKRTMKACGG 115 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~-v-~----~~~l~~ia~~tGa 115 (632)
-+|+|+.+++||||.....++.....|.+.|||++.- . + .+.++.++.++|-
T Consensus 52 n~E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~ 109 (260)
T 2q8p_A 52 NVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNR 109 (260)
T ss_dssp CHHHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3788999999999998766667778899999987642 1 1 2446677777765
No 83
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=38.26 E-value=71 Score=26.32 Aligned_cols=51 Identities=10% Similarity=-0.005 Sum_probs=36.5
Q ss_pred HHHHHHHHcCCcEEEEecCcChhHH----HHHHHCCceEEEeCCchhHHHHHHHhCCE
Q psy17074 63 EKLDKIHASGAQVVLSKLPIGDVAT----QYFADRDMFCAGRVPEEDLKRTMKACGGA 116 (632)
Q Consensus 63 ~~~~~i~~~g~~lvi~~~~I~~~al----~~l~~~~I~~~~~v~~~~l~~ia~~tGa~ 116 (632)
+..+.|.+-.+.+||.+.+.++... +++..++||.+..-++. .|..++|-.
T Consensus 26 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~---eLG~A~Gk~ 80 (101)
T 3v7q_A 26 LVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRA---VLGRSIGKE 80 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHH---HHHHHTTSS
T ss_pred hhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHH---HHHhhhCcc
Confidence 3455566678899999999998544 45677899998875544 466666654
No 84
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=37.89 E-value=7.8 Score=35.84 Aligned_cols=16 Identities=56% Similarity=0.671 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHhhhh
Q psy17074 18 KKKKKKKKKKKKKKKK 33 (632)
Q Consensus 18 ~~~~~~~~~~~~~~~~ 33 (632)
||++|+||||+.|++.
T Consensus 6 ~~~~~~k~~~~~k~e~ 21 (196)
T 3dtp_E 6 KKEKKKKSKKKAEEEG 21 (196)
T ss_dssp HHHTTSHHHHSSHHHH
T ss_pred cccccccchhhhhccc
Confidence 4444444444444433
No 85
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=37.75 E-value=49 Score=31.70 Aligned_cols=53 Identities=9% Similarity=0.003 Sum_probs=41.4
Q ss_pred HHHHHHHcCCcEEEEecCcC-hhHHHHHHHCCceEEEeC---C----chhHHHHHHHhCCE
Q psy17074 64 KLDKIHASGAQVVLSKLPIG-DVATQYFADRDMFCAGRV---P----EEDLKRTMKACGGA 116 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~~I~-~~al~~l~~~~I~~~~~v---~----~~~l~~ia~~tGa~ 116 (632)
-+|+|+.+++||||...... ......|.+.|||++.-- + .+.++.++.++|..
T Consensus 51 n~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 51 NAEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQT 111 (255)
T ss_dssp CHHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHHTCH
T ss_pred CHHHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHHHhCCH
Confidence 37899999999999987764 567888999999987532 1 34478888989864
No 86
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=37.73 E-value=54 Score=28.68 Aligned_cols=51 Identities=14% Similarity=0.055 Sum_probs=37.2
Q ss_pred HHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 546 KLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 546 ~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
..+.+...|+++|||. +|.+-+...|.. ||-++......--+-|.....++
T Consensus 71 ~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 71 MLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 3566677899999997 589999999999 99999886533333344444443
No 87
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=36.19 E-value=57 Score=31.90 Aligned_cols=52 Identities=10% Similarity=0.056 Sum_probs=38.9
Q ss_pred HHHHHHHcCCcEEEEecCc-ChhHHHHHHHCCceEEEeC---C----chhHHHHHHHhCC
Q psy17074 64 KLDKIHASGAQVVLSKLPI-GDVATQYFADRDMFCAGRV---P----EEDLKRTMKACGG 115 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~~I-~~~al~~l~~~~I~~~~~v---~----~~~l~~ia~~tGa 115 (632)
-+|+|+.++++|||..... ++.....|.+.||+++.-- + .+.++.++.++|.
T Consensus 51 n~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~ 110 (283)
T 2r79_A 51 AAEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGV 110 (283)
T ss_dssp CHHHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence 4788999999999997653 5677889999999887531 1 2456777777764
No 88
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=36.03 E-value=78 Score=26.09 Aligned_cols=50 Identities=10% Similarity=0.011 Sum_probs=36.7
Q ss_pred HHHHHHhcCCcEEEEeCCccHHHHH----HHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 546 KLDKIHASGAQVVLSKLPIGDVATQ----YFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 546 ~v~~i~~~gv~vvi~~~~I~~~al~----~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
..+.|.+-.+.+||.+.|.++.... ++..++|.++...++.+ |..++|-.
T Consensus 27 v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~e---LG~A~Gk~ 80 (101)
T 3v7q_A 27 VIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAV---LGRSIGKE 80 (101)
T ss_dssp HHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHH---HHHHTTSS
T ss_pred hHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHH---HHhhhCcc
Confidence 3555666779999999999985444 45678999888766655 66667764
No 89
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=35.41 E-value=43 Score=34.01 Aligned_cols=52 Identities=10% Similarity=-0.048 Sum_probs=35.5
Q ss_pred HHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCC-----------chhHHHHHHHhCC
Q psy17074 64 KLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVP-----------EEDLKRTMKACGG 115 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~-----------~~~l~~ia~~tGa 115 (632)
-+|+|+.++++|||....-.+...+.+...|||++.--- .+.++.++.++|.
T Consensus 88 n~E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~~~~~~~~~~~~~~~i~~lG~~lG~ 150 (346)
T 2etv_A 88 DLESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSYGNLGTFEDEDLFRSIELAGXILGR 150 (346)
T ss_dssp CHHHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECCCCTTCSCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEecCccCcccHHHHHHHHHHHHHHcCC
Confidence 368888999999998765334556677788998875321 2346666666654
No 90
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=34.32 E-value=72 Score=26.23 Aligned_cols=51 Identities=8% Similarity=0.010 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCcEEEEecCcChhHHH----HHHHCCceEEEeCCchhHHHHHHHhCCE
Q psy17074 63 EKLDKIHASGAQVVLSKLPIGDVATQ----YFADRDMFCAGRVPEEDLKRTMKACGGA 116 (632)
Q Consensus 63 ~~~~~i~~~g~~lvi~~~~I~~~al~----~l~~~~I~~~~~v~~~~l~~ia~~tGa~ 116 (632)
+.++.|.+-.+.+||.+.+.++.... ++..++||.+..-++. .+..++|-.
T Consensus 25 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~---eLG~a~Gk~ 79 (101)
T 3on1_A 25 QVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQ---MLGRAIGKH 79 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHH---HHHHHTTSS
T ss_pred HHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHH---HHHHHhCCc
Confidence 34555666779999999999986544 4567899998765544 456666653
No 91
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=33.58 E-value=64 Score=32.44 Aligned_cols=50 Identities=14% Similarity=0.060 Sum_probs=38.2
Q ss_pred HHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCC------chhHHHHHHHhCC
Q psy17074 65 LDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVP------EEDLKRTMKACGG 115 (632)
Q Consensus 65 ~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~------~~~l~~ia~~tGa 115 (632)
+|+|+.++++|||.... .......|.+.|||++.--. .+.++.++.++|-
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~ 164 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLGIKAVVVNPEDQSLLEECITLVGKITNN 164 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHHcCC
Confidence 78999999999999875 56677889999999875321 2446777777775
No 92
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=32.80 E-value=47 Score=31.61 Aligned_cols=36 Identities=14% Similarity=0.087 Sum_probs=30.1
Q ss_pred HHHHHHHcCCcEEEEec-CcChhHHHHHHHCCceEEE
Q psy17074 64 KLDKIHASGAQVVLSKL-PIGDVATQYFADRDMFCAG 99 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~-~I~~~al~~l~~~~I~~~~ 99 (632)
-+|+|+.+++||||... ..++...+.|.+.|||++.
T Consensus 49 n~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~ 85 (245)
T 1n2z_A 49 NLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMW 85 (245)
T ss_dssp CHHHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEE
T ss_pred CHHHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEE
Confidence 37899999999999863 4677788899999999885
No 93
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=32.59 E-value=59 Score=28.54 Aligned_cols=48 Identities=8% Similarity=0.086 Sum_probs=34.6
Q ss_pred HHHHHHcCCcEEEEecCcChh-----HHHHHHHCCceEEEeCCchhHHHHHHHhCC
Q psy17074 65 LDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACGG 115 (632)
Q Consensus 65 ~~~i~~~g~~lvi~~~~I~~~-----al~~l~~~~I~~~~~v~~~~l~~ia~~tGa 115 (632)
++.|.+-.+.+||++.++++. ...+|.++|||.+.--++. +|..++|-
T Consensus 41 ~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~---eLG~a~G~ 93 (134)
T 2ale_A 41 TKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRV---ALGRACGV 93 (134)
T ss_dssp HHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHH---HHHHHTTC
T ss_pred HHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHH---HHHHHhCC
Confidence 455556678899999999985 4567888899977654444 56666654
No 94
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=32.06 E-value=65 Score=32.14 Aligned_cols=52 Identities=8% Similarity=0.039 Sum_probs=41.1
Q ss_pred HHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCC--------------------------chhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVP--------------------------EEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~--------------------------~~~L~rIa~~tGa~ 598 (632)
+|.|++.+++|||.....++.....|.+.||.++-... .+.++.|+.++|-.
T Consensus 77 ~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 77 IESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp HHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 67788999999999876677788889999987665431 35678899999975
No 95
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=31.56 E-value=91 Score=25.81 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=35.6
Q ss_pred HHHHHHHHHcCCcEEEEecCcChhHH----HHHHHCCceEEE-eCCchhHHHHHHHhCC
Q psy17074 62 YEKLDKIHASGAQVVLSKLPIGDVAT----QYFADRDMFCAG-RVPEEDLKRTMKACGG 115 (632)
Q Consensus 62 ~~~~~~i~~~g~~lvi~~~~I~~~al----~~l~~~~I~~~~-~v~~~~l~~ia~~tGa 115 (632)
.+.++.|..-.+.+||.+.+.++... +++..++||.+. .-++.+ |..++|-
T Consensus 28 ~~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~e---LG~a~Gk 83 (104)
T 4a18_G 28 KSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVE---LGTACGK 83 (104)
T ss_dssp HHHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHH---HHHHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHH---HHHHhCC
Confidence 34456666778999999999998443 345667999986 555444 5666664
No 96
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=31.15 E-value=80 Score=25.94 Aligned_cols=50 Identities=8% Similarity=-0.010 Sum_probs=36.0
Q ss_pred HHHHHHhcCCcEEEEeCCccHHHHH----HHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 546 KLDKIHASGAQVVLSKLPIGDVATQ----YFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 546 ~v~~i~~~gv~vvi~~~~I~~~al~----~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
..+.|.+-.+.+||.+.|.++.... ++..++|.++...++.+ |..++|-.
T Consensus 26 v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~e---LG~a~Gk~ 79 (101)
T 3on1_A 26 VVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQM---LGRAIGKH 79 (101)
T ss_dssp HHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHTTSS
T ss_pred HHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHHH---HHHHhCCc
Confidence 3555666679999999999986544 45667999887766655 56667764
No 97
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=30.86 E-value=94 Score=29.62 Aligned_cols=52 Identities=6% Similarity=-0.016 Sum_probs=39.6
Q ss_pred HHHHHhcCCcEEEEeCC-ccHHHHHHHHHCCcEEEecC----C----chhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLP-IGDVATQYFADRDMFCAGRV----P----EEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~-I~~~al~~L~~~~I~~v~~v----~----~~~L~rIa~~tGa~ 598 (632)
+|.|++.+++|||.... .+......|.+.||.++-.. + .+.++.|+.++|-.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~~~g~~ 112 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVP 112 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHHhCCH
Confidence 67888999999999765 46777888999998665432 2 24577899999865
No 98
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=30.58 E-value=52 Score=28.88 Aligned_cols=49 Identities=8% Similarity=0.084 Sum_probs=36.3
Q ss_pred HHHHHHhcCCcEEEEeCCccHH-----HHHHHHHCCcEEEecCCchhHHHHHHHcCC
Q psy17074 546 KLDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACGG 597 (632)
Q Consensus 546 ~v~~i~~~gv~vvi~~~~I~~~-----al~~L~~~~I~~v~~v~~~~L~rIa~~tGa 597 (632)
.++.|.+..+.+||++.++++. ...++.++||..+...++.+ |..++|-
T Consensus 40 v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~G~ 93 (134)
T 2ale_A 40 ATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVA---LGRACGV 93 (134)
T ss_dssp HHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHHH---HHHHhCC
Confidence 3555666678999999999985 45677888999887776665 5555554
No 99
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=30.53 E-value=91 Score=25.56 Aligned_cols=48 Identities=13% Similarity=0.112 Sum_probs=36.5
Q ss_pred HHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCchhHHHHHHHhCC
Q psy17074 66 DKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGG 115 (632)
Q Consensus 66 ~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~~~l~~ia~~tGa 115 (632)
+.+.+.|+++|||. +|.+-+.+.|..+ |-++.......-+.+.....+
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g 97 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEG 97 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTT
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcC
Confidence 55567899999997 5999999999999 999986554444555554444
No 100
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=30.32 E-value=1.1e+02 Score=25.88 Aligned_cols=48 Identities=10% Similarity=0.022 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCcEEEEecCcChh----HHHHHHHCCceEEEe-CCchhHHHHH
Q psy17074 63 EKLDKIHASGAQVVLSKLPIGDV----ATQYFADRDMFCAGR-VPEEDLKRTM 110 (632)
Q Consensus 63 ~~~~~i~~~g~~lvi~~~~I~~~----al~~l~~~~I~~~~~-v~~~~l~~ia 110 (632)
+.++.|.+-.+.|||.+.+.++. ..+++..++||++.- -++.+|-..+
T Consensus 33 ~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A~ 85 (112)
T 3iz5_f 33 TVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTAC 85 (112)
T ss_dssp HHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHHH
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHHh
Confidence 44666667789999999999984 445678899999876 5666655444
No 101
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=29.57 E-value=1.2e+02 Score=25.61 Aligned_cols=50 Identities=16% Similarity=0.138 Sum_probs=37.2
Q ss_pred HHHHHHHhcCCcEEEEeCCccHH----HHHHHHHCCcEEEec-CCchhHHHHHHHcCC
Q psy17074 545 EKLDKIHASGAQVVLSKLPIGDV----ATQYFADRDMFCAGR-VPEEDLKRTMKACGG 597 (632)
Q Consensus 545 ~~v~~i~~~gv~vvi~~~~I~~~----al~~L~~~~I~~v~~-v~~~~L~rIa~~tGa 597 (632)
+.++.|.+-.+.+||.+.+.++. ..+++..++|.++.. .++.+| ..++|-
T Consensus 33 ~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eL---G~A~Gk 87 (112)
T 3iz5_f 33 TVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDL---GTACGK 87 (112)
T ss_dssp HHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTH---HHHHCT
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHH---HHHhCC
Confidence 34666777789999999999984 455677899999988 677765 445554
No 102
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=29.51 E-value=98 Score=29.45 Aligned_cols=52 Identities=10% Similarity=-0.002 Sum_probs=40.6
Q ss_pred HHHHHhcCCcEEEEeCCcc-HHHHHHHHHCCcEEEecC---C----chhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLPIG-DVATQYFADRDMFCAGRV---P----EEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I~-~~al~~L~~~~I~~v~~v---~----~~~L~rIa~~tGa~ 598 (632)
+|.|++.+++|||...... +.....|.+.||.++-.. + .+.++.|+.++|-.
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHHHhCCH
Confidence 6788999999999987764 567788999998776543 2 45678899999975
No 103
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=29.51 E-value=51 Score=31.60 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=39.0
Q ss_pred HHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEec--CC----chhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGR--VP----EEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~--v~----~~~L~rIa~~tGa~ 598 (632)
+|.|++.+++|||.....++.....|.+.||.++-. -+ .+.++.|+.++|-.
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~~ 110 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRK 110 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCCh
Confidence 677889999999998776667778888888754432 12 35677899999875
No 104
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=29.30 E-value=81 Score=27.60 Aligned_cols=48 Identities=15% Similarity=0.097 Sum_probs=34.1
Q ss_pred HHHHHHcCCcEEEEecCcChhHH-----HHHHHCCceEEEeCCchhHHHHHHHhCC
Q psy17074 65 LDKIHASGAQVVLSKLPIGDVAT-----QYFADRDMFCAGRVPEEDLKRTMKACGG 115 (632)
Q Consensus 65 ~~~i~~~g~~lvi~~~~I~~~al-----~~l~~~~I~~~~~v~~~~l~~ia~~tGa 115 (632)
.+.|.+-.+.+||.+.++++.-. .++..++||.+..-++ +.+..++|-
T Consensus 50 ~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~sk---~eLG~a~G~ 102 (135)
T 2aif_A 50 TKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSK---VALGRACGV 102 (135)
T ss_dssp HHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESCH---HHHHHHTTC
T ss_pred HHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECCH---HHHHHHhCC
Confidence 44555566889999999988743 4677789999876555 455666664
No 105
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=28.74 E-value=91 Score=30.88 Aligned_cols=52 Identities=13% Similarity=0.129 Sum_probs=38.1
Q ss_pred HHHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCC----chhHHHHHHHhCC
Q psy17074 64 KLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVP----EEDLKRTMKACGG 115 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~----~~~l~~ia~~tGa 115 (632)
-+|+|+.+++||||.....++.....|.+.+..++-... .+.++.++.++|-
T Consensus 88 n~E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~ 143 (311)
T 2wi8_A 88 NIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGK 143 (311)
T ss_dssp CHHHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTC
T ss_pred CHHHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCC
Confidence 378899999999999877778888889988854443322 2446777777765
No 106
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=28.36 E-value=1.1e+02 Score=25.24 Aligned_cols=50 Identities=16% Similarity=0.159 Sum_probs=36.0
Q ss_pred HHHHHHHhcCCcEEEEeCCccHHHHH----HHHHCCcEEEe-cCCchhHHHHHHHcCC
Q psy17074 545 EKLDKIHASGAQVVLSKLPIGDVATQ----YFADRDMFCAG-RVPEEDLKRTMKACGG 597 (632)
Q Consensus 545 ~~v~~i~~~gv~vvi~~~~I~~~al~----~L~~~~I~~v~-~v~~~~L~rIa~~tGa 597 (632)
+.++.|.+-.+.+||.+.|.++.... ++..++|.++. ..++.+ |..++|-
T Consensus 29 ~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~e---LG~a~Gk 83 (104)
T 4a18_G 29 STIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVE---LGTACGK 83 (104)
T ss_dssp HHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHH---HHHHTTC
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHH---HHHHhCC
Confidence 44666667779999999999985443 45567999986 666666 5566664
No 107
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=28.25 E-value=97 Score=26.41 Aligned_cols=48 Identities=15% Similarity=0.081 Sum_probs=33.3
Q ss_pred HHHHHHcCCcEEEEecCcChh-----HHHHHHHCCceEEEeCCchhHHHHHHHhCC
Q psy17074 65 LDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACGG 115 (632)
Q Consensus 65 ~~~i~~~g~~lvi~~~~I~~~-----al~~l~~~~I~~~~~v~~~~l~~ia~~tGa 115 (632)
.+.|.+-.+.+||.+.++++. ...++..++||.+..-++.+ |..++|-
T Consensus 38 ~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~G~ 90 (120)
T 1xbi_A 38 TKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQD---LGKAAGL 90 (120)
T ss_dssp HHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCCHHH---HHHHhCC
Confidence 445556678999999999874 34567778999776665554 4455554
No 108
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=28.14 E-value=1.1e+02 Score=25.94 Aligned_cols=48 Identities=13% Similarity=0.076 Sum_probs=33.9
Q ss_pred HHHHHHcCCcEEEEecCcChh-----HHHHHHHCCceEEEeCCchhHHHHHHHhCC
Q psy17074 65 LDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACGG 115 (632)
Q Consensus 65 ~~~i~~~g~~lvi~~~~I~~~-----al~~l~~~~I~~~~~v~~~~l~~ia~~tGa 115 (632)
.+.|.+-.+.+||.+.++++. ...++..++||.+..-++.+ +..++|-
T Consensus 38 ~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~e---LG~a~G~ 90 (120)
T 1vq8_F 38 TKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDD---LGHAAGL 90 (120)
T ss_dssp HHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCHHH---HHHHhCC
Confidence 455556678999999999773 34567778999876665554 5555554
No 109
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=27.15 E-value=95 Score=30.23 Aligned_cols=52 Identities=10% Similarity=0.061 Sum_probs=40.2
Q ss_pred HHHHHhcCCcEEEEeCCc-cHHHHHHHHHCCcEEEecC---C----chhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLPI-GDVATQYFADRDMFCAGRV---P----EEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I-~~~al~~L~~~~I~~v~~v---~----~~~L~rIa~~tGa~ 598 (632)
+|.|++.+++|||..... ++.....|.+.||.++-.. + .+.++.|++++|-.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (283)
T 2r79_A 52 AEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVP 111 (283)
T ss_dssp HHHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCCH
Confidence 677899999999997654 5677788999998766542 2 46688899999965
No 110
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=26.77 E-value=1e+02 Score=26.34 Aligned_cols=49 Identities=16% Similarity=0.120 Sum_probs=35.6
Q ss_pred HHHHHHhcCCcEEEEeCCccHH-----HHHHHHHCCcEEEecCCchhHHHHHHHcCC
Q psy17074 546 KLDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACGG 597 (632)
Q Consensus 546 ~v~~i~~~gv~vvi~~~~I~~~-----al~~L~~~~I~~v~~v~~~~L~rIa~~tGa 597 (632)
..+.|.+..+.+||.+.|+++. ...++..+||..+...++.+|- .++|-
T Consensus 37 v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG---~a~G~ 90 (120)
T 1xbi_A 37 VTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDLG---KAAGL 90 (120)
T ss_dssp HHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESCHHHHH---HHTTC
T ss_pred HHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCCHHHHH---HHhCC
Confidence 3555666679999999999874 3456777899988877776654 45554
No 111
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=26.54 E-value=1.2e+02 Score=24.88 Aligned_cols=48 Identities=13% Similarity=0.112 Sum_probs=35.1
Q ss_pred HHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCchhHHHHHHHcCC
Q psy17074 548 DKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMKACGG 597 (632)
Q Consensus 548 ~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa 597 (632)
+.+...|+++|||. +|.+-+...|..+ |-++......--+-|.....+
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g 97 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEG 97 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTT
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcC
Confidence 45567899999996 6999999999999 999986554333334444333
No 112
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=26.35 E-value=86 Score=27.42 Aligned_cols=50 Identities=14% Similarity=0.099 Sum_probs=35.9
Q ss_pred HHHHHHhcCCcEEEEeCCccHHHH-----HHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 546 KLDKIHASGAQVVLSKLPIGDVAT-----QYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 546 ~v~~i~~~gv~vvi~~~~I~~~al-----~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
..+.|.+..+.+||.+.+.++.-. +++..++|..+...++.+ |..++|-.
T Consensus 49 v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~sk~e---LG~a~G~~ 103 (135)
T 2aif_A 49 ATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKVA---LGRACGVS 103 (135)
T ss_dssp HHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESCHHH---HHHHTTCS
T ss_pred HHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECCHHH---HHHHhCCC
Confidence 355556667889999999988633 466778999988776655 55666643
No 113
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=25.89 E-value=1.3e+02 Score=25.79 Aligned_cols=48 Identities=8% Similarity=0.003 Sum_probs=33.5
Q ss_pred HHHHHHcCCcEEEEecCcChh-----HHHHHHHCCceEEEeCCchhHHHHHHHhCC
Q psy17074 65 LDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACGG 115 (632)
Q Consensus 65 ~~~i~~~g~~lvi~~~~I~~~-----al~~l~~~~I~~~~~v~~~~l~~ia~~tGa 115 (632)
.+.|.+-.+.+||.+.++++. ...++..++||.+..-++.+ +..++|-
T Consensus 37 ~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk~e---LG~a~G~ 89 (124)
T 2fc3_A 37 TKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKR---LGEAAGI 89 (124)
T ss_dssp HHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCHHH---HHHHhCC
Confidence 455556678999999999773 34567788999876665554 4555554
No 114
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=25.18 E-value=80 Score=29.92 Aligned_cols=52 Identities=12% Similarity=0.029 Sum_probs=38.5
Q ss_pred HHHHHhcCCcEEEEeC-CccHHHHHHHHHCCcEEEecCC------chhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKL-PIGDVATQYFADRDMFCAGRVP------EEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~-~I~~~al~~L~~~~I~~v~~v~------~~~L~rIa~~tGa~ 598 (632)
+|.|++.+++|||... ..++.....|.+.||.++-... .+.++.+++++|-.
T Consensus 50 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~~ 108 (245)
T 1n2z_A 50 LERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQP 108 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCCSHHHHHHHHHHHGGGCSCH
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHHHhCCH
Confidence 6778899999999863 4677778889998877664321 35577788888864
No 115
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=24.89 E-value=1.3e+02 Score=25.51 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=35.9
Q ss_pred HHHHHHhcCCcEEEEeCCccHH-----HHHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 546 KLDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 546 ~v~~i~~~gv~vvi~~~~I~~~-----al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
..+.|.+..+.+||.+.|.++. ...++..+||..+...++.+ |..++|-.
T Consensus 37 v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~e---LG~a~G~~ 91 (120)
T 1vq8_F 37 TTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDD---LGHAAGLE 91 (120)
T ss_dssp HHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESCHHH---HHHHTTCS
T ss_pred HHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCHHH---HHHHhCCC
Confidence 4555666678999999999874 34567778999887777766 45556654
No 116
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=24.30 E-value=1.4e+02 Score=25.46 Aligned_cols=51 Identities=12% Similarity=0.062 Sum_probs=36.4
Q ss_pred HHHHHHHhcCCcEEEEeCCccHH-----HHHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 545 EKLDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 545 ~~v~~i~~~gv~vvi~~~~I~~~-----al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
+..+.|.+..+.+||.+.|.++. ...++..+||..+...++.+| ..++|-.
T Consensus 35 ~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk~eL---G~a~G~~ 90 (124)
T 2fc3_A 35 ETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRL---GEAAGIE 90 (124)
T ss_dssp HHHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCHHHH---HHHTTCS
T ss_pred HHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCHHHH---HHHhCCC
Confidence 34555666678999999999774 345777899998887777664 4555543
No 117
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=23.54 E-value=1.4e+02 Score=25.53 Aligned_cols=49 Identities=12% Similarity=0.123 Sum_probs=34.4
Q ss_pred HHHHHHHcCCcEEEEecCcChh-----HHHHHHHCCceEEEeCCchhHHHHHHHhCC
Q psy17074 64 KLDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACGG 115 (632)
Q Consensus 64 ~~~~i~~~g~~lvi~~~~I~~~-----al~~l~~~~I~~~~~v~~~~l~~ia~~tGa 115 (632)
..+.+.+-.+.+||.+.+.++. ...++..+|||.+..-++.+ +..++|-
T Consensus 39 v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~Gk 92 (122)
T 3o85_A 39 ALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVFIGSKNA---LGRACNV 92 (122)
T ss_dssp HHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHH---HHHHhCC
Confidence 3555556678999999999764 34567888999777665554 5555654
No 118
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=23.25 E-value=86 Score=31.71 Aligned_cols=52 Identities=10% Similarity=-0.051 Sum_probs=37.0
Q ss_pred HHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCC-----------chhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVP-----------EEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~-----------~~~L~rIa~~tGa~ 598 (632)
+|.|++.+++|||....-.+.....+...||.++-... .+.++.|+.++|-.
T Consensus 89 ~E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~~~~~~~~~~~~~~~i~~lG~~lG~e 151 (346)
T 2etv_A 89 LESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSYGNLGTFEDEDLFRSIELAGXILGRE 151 (346)
T ss_dssp HHHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECCCCTTCSCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEecCccCcccHHHHHHHHHHHHHHcCCH
Confidence 67788889999998765344566677777876554321 45677888888864
No 119
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=22.37 E-value=72 Score=31.51 Aligned_cols=41 Identities=7% Similarity=0.040 Sum_probs=37.5
Q ss_pred HHHHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCCc
Q psy17074 545 EKLDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPE 585 (632)
Q Consensus 545 ~~v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~~ 585 (632)
+++.+.+..|+++|++-..-+..+.++..+.||+.|..++.
T Consensus 206 EmV~Kaa~aGIpvlvS~SApTslAV~lA~~~giTLiGf~R~ 246 (268)
T 2pw9_A 206 DMVLKCARIGIPIIMSRTSPSSLGLALAKRSGATLVAYSRP 246 (268)
T ss_dssp HHHHHHHHHTCCEEEESSCBCHHHHHHHHHHTCEEEEEEET
T ss_pred HHHHHHHHcCCCEEEEcccccHHHHHHHHHcCCEEEEEecC
Confidence 45999999999999999999999999999999999887753
No 120
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=22.27 E-value=1.3e+02 Score=29.70 Aligned_cols=52 Identities=13% Similarity=0.124 Sum_probs=39.5
Q ss_pred HHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCC----chhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVP----EEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~----~~~L~rIa~~tGa~ 598 (632)
+|.|++.+++|||.....++.....|.+.+..++-... .+.++.|++++|-.
T Consensus 89 ~E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~e 144 (311)
T 2wi8_A 89 IEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKE 144 (311)
T ss_dssp HHHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTCH
T ss_pred HHHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCCH
Confidence 67788889999999877778888889888865443322 45678889999865
No 121
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=22.21 E-value=1.2e+02 Score=30.24 Aligned_cols=51 Identities=16% Similarity=0.074 Sum_probs=38.8
Q ss_pred HHHHHhcCCcEEEEeCCccHHHHHHHHHCCcEEEecCC------chhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVP------EEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I~~~al~~L~~~~I~~v~~v~------~~~L~rIa~~tGa~ 598 (632)
+|.|++.+++|||.... +......|.+.||.++-... .+.++.|++++|-.
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~e 165 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLGIKAVVVNPEDQSLLEECITLVGKITNNA 165 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHHcCCH
Confidence 67888999999999765 56667788898886665432 45678889999865
No 122
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=22.09 E-value=85 Score=26.67 Aligned_cols=49 Identities=12% Similarity=0.033 Sum_probs=34.4
Q ss_pred HHHHHHcCCcEEEEecCcChhH-----HHHHHHCCceEEEeCCchhHHHHHHHhCCE
Q psy17074 65 LDKIHASGAQVVLSKLPIGDVA-----TQYFADRDMFCAGRVPEEDLKRTMKACGGA 116 (632)
Q Consensus 65 ~~~i~~~g~~lvi~~~~I~~~a-----l~~l~~~~I~~~~~v~~~~l~~ia~~tGa~ 116 (632)
++.|.+-.+.+||++.++++.- ..++.++|||.+.--++.+|- .++|-.
T Consensus 34 ~kaI~~gka~LVvIA~D~~p~~i~~~l~~lC~~~~VP~~~v~sk~~LG---~a~G~k 87 (113)
T 3jyw_G 34 VALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARLG---TLVNQK 87 (113)
T ss_dssp HHTTTTTCCSEEEECSCCSSHHHHTTHHHHHHHTTCCCEECSCSTTTH---HHHCSS
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCEEEECCHHHHH---HHHCCC
Confidence 4444456789999999998732 356788999999766666655 455543
No 123
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=21.93 E-value=1.3e+02 Score=29.63 Aligned_cols=48 Identities=6% Similarity=-0.097 Sum_probs=34.5
Q ss_pred HHHHHHcCCcEEEEecCcCh-----hHHHHHHHCCceEEEeCCchhHHHHHHHhCC
Q psy17074 65 LDKIHASGAQVVLSKLPIGD-----VATQYFADRDMFCAGRVPEEDLKRTMKACGG 115 (632)
Q Consensus 65 ~~~i~~~g~~lvi~~~~I~~-----~al~~l~~~~I~~~~~v~~~~l~~ia~~tGa 115 (632)
+..|-+-.+.|||++.++++ ....+|..+|||.+.--++.+ |..++|-
T Consensus 144 ~KaIekgkAkLVIIA~DasP~ei~~~Lp~LC~~~~VPyi~v~sk~e---LG~A~Gk 196 (266)
T 2zkr_f 144 TTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKAR---LGHLVHR 196 (266)
T ss_dssp HHHHHTTCCSEEEEESCCSSSTTTTHHHHHHHHHTCCEEEESCHHH---HHHHHTS
T ss_pred HHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCEEEECCHHH---HHHHhCC
Confidence 44455568999999999988 345778899999887655544 5555554
No 124
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=21.45 E-value=1.4e+02 Score=24.65 Aligned_cols=50 Identities=4% Similarity=-0.031 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCcEEEEecCcCh----hHHHHHHHCCceEE-EeCCchhHHHHH
Q psy17074 61 LYEKLDKIHASGAQVVLSKLPIGD----VATQYFADRDMFCA-GRVPEEDLKRTM 110 (632)
Q Consensus 61 i~~~~~~i~~~g~~lvi~~~~I~~----~al~~l~~~~I~~~-~~v~~~~l~~ia 110 (632)
..+.++.|..-.+.+||.+.+.++ ...+++..++||.+ ..-++.+|-..+
T Consensus 27 ~~~v~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~A~ 81 (105)
T 3u5e_c 27 YKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAV 81 (105)
T ss_dssp HHHHHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHT
T ss_pred HHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHHHHHh
No 125
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=21.33 E-value=1.4e+02 Score=25.60 Aligned_cols=51 Identities=14% Similarity=0.148 Sum_probs=36.4
Q ss_pred HHHHHHHhcCCcEEEEeCCccHH-----HHHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 545 EKLDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 545 ~~v~~i~~~gv~vvi~~~~I~~~-----al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
...+.+.+..+.+||.+.+.++. ..+++..+||..+...++.+ |..++|-.
T Consensus 38 ~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~Gk~ 93 (122)
T 3o85_A 38 EALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVFIGSKNA---LGRACNVS 93 (122)
T ss_dssp HHHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEESCHHH---HHHHTTCS
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHH---HHHHhCCC
Confidence 34555666679999999999864 34567779999887777666 55566654
No 126
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=21.30 E-value=1.9e+02 Score=24.11 Aligned_cols=50 Identities=8% Similarity=0.008 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCcEEEEecCcChhHH----HHHHHCCceEEEe-CCchhHHHHH
Q psy17074 61 LYEKLDKIHASGAQVVLSKLPIGDVAT----QYFADRDMFCAGR-VPEEDLKRTM 110 (632)
Q Consensus 61 i~~~~~~i~~~g~~lvi~~~~I~~~al----~~l~~~~I~~~~~-v~~~~l~~ia 110 (632)
..+..+.|.+-.+.+||.+.++++... +++..++||++.- -++.+|...+
T Consensus 26 ~~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG~a~ 80 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELGAVC 80 (110)
T ss_dssp HHHHHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHHHHT
T ss_pred HHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHHHHh
No 127
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=20.80 E-value=1.2e+02 Score=25.73 Aligned_cols=48 Identities=10% Similarity=0.032 Sum_probs=32.6
Q ss_pred HHHHHHcCCcEEEEecCcChh-----HHHHHHHCCceEEEeCCchhHHHHHHHhCC
Q psy17074 65 LDKIHASGAQVVLSKLPIGDV-----ATQYFADRDMFCAGRVPEEDLKRTMKACGG 115 (632)
Q Consensus 65 ~~~i~~~g~~lvi~~~~I~~~-----al~~l~~~~I~~~~~v~~~~l~~ia~~tGa 115 (632)
.+.|.+-.+.+||.+.++++. ...++..++||.+..-++.+ +..++|-
T Consensus 36 ~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~e---LG~a~G~ 88 (119)
T 1rlg_A 36 TKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKND---LGRAVGI 88 (119)
T ss_dssp HHHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEESCHHH---HHHHTTC
T ss_pred HHHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeCCHHH---HHHHhCC
Confidence 445555678899999999763 34567778999776665554 4555554
No 128
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=20.79 E-value=88 Score=26.58 Aligned_cols=49 Identities=12% Similarity=0.025 Sum_probs=35.4
Q ss_pred HHHHHhcCCcEEEEeCCccHH-H----HHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 547 LDKIHASGAQVVLSKLPIGDV-A----TQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 547 v~~i~~~gv~vvi~~~~I~~~-a----l~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
++.|.+..+.+||++.++|+. . ..++.++||..+...++.+|- .++|-.
T Consensus 34 ~kaI~~gka~LVvIA~D~~p~~i~~~l~~lC~~~~VP~~~v~sk~~LG---~a~G~k 87 (113)
T 3jyw_G 34 VALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARLG---TLVNQK 87 (113)
T ss_dssp HHTTTTTCCSEEEECSCCSSHHHHTTHHHHHHHTTCCCEECSCSTTTH---HHHCSS
T ss_pred HHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCEEEECCHHHHH---HHHCCC
Confidence 445556679999999999873 2 346778999988888876654 555543
No 129
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=20.61 E-value=87 Score=30.89 Aligned_cols=42 Identities=7% Similarity=-0.136 Sum_probs=25.4
Q ss_pred EEecCcChhHHHHHHHCCceEEEeCCc--hhHHHHHHHhCCEEe
Q psy17074 77 LSKLPIGDVATQYFADRDMFCAGRVPE--EDLKRTMKACGGAVM 118 (632)
Q Consensus 77 i~~~~I~~~al~~l~~~~I~~~~~v~~--~~l~~ia~~tGa~ii 118 (632)
++.+-++-+..+-....|||++--++- .--=++|+-.|-+++
T Consensus 198 ~~SgR~S~EmV~Kaa~aGIpvlvS~SApTslAV~lA~~~giTLi 241 (268)
T 2pw9_A 198 YTTGRLTSDMVLKCARIGIPIIMSRTSPSSLGLALAKRSGATLV 241 (268)
T ss_dssp EESSCBCHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHHTCEEE
T ss_pred EEecCchHHHHHHHHHcCCCEEEEcccccHHHHHHHHHcCCEEE
Confidence 666666666666666667766544432 223356666666666
No 130
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=20.49 E-value=2.1e+02 Score=28.06 Aligned_cols=54 Identities=7% Similarity=-0.058 Sum_probs=38.5
Q ss_pred HHHHHHHhcCCcEEEEeCCccH-----HHHHHHHHCCcEEEecCCchhHHHHHHHcCCe
Q psy17074 545 EKLDKIHASGAQVVLSKLPIGD-----VATQYFADRDMFCAGRVPEEDLKRTMKACGGA 598 (632)
Q Consensus 545 ~~v~~i~~~gv~vvi~~~~I~~-----~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ 598 (632)
..+..|.+..+.+||++.|+|+ ....+|..+||..+...++.+|-..|-.-++.
T Consensus 142 eV~KaIekgkAkLVIIA~DasP~ei~~~Lp~LC~~~~VPyi~v~sk~eLG~A~Gkk~~s 200 (266)
T 2zkr_f 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGHLVHRKTCT 200 (266)
T ss_dssp HHHHHHHTTCCSEEEEESCCSSSTTTTHHHHHHHHHTCCEEEESCHHHHHHHHTSSCCS
T ss_pred HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCEEEECCHHHHHHHhCCCCce
Confidence 3455666667999999999988 34577888999988887776655544433333
No 131
>3tny_A YFIY (ABC transport system substrate-binding PROT; schizokinen, nutrient binding protein, ABC transporter, metal transport; HET: SKZ; 1.55A {Bacillus cereus}
Probab=20.32 E-value=97 Score=30.43 Aligned_cols=51 Identities=8% Similarity=0.035 Sum_probs=37.1
Q ss_pred HHHHHHcCCcEEEEecCcChhHHHHHHHCCceEEEeCCc----hhHHHHHHHhCC
Q psy17074 65 LDKIHASGAQVVLSKLPIGDVATQYFADRDMFCAGRVPE----EDLKRTMKACGG 115 (632)
Q Consensus 65 ~~~i~~~g~~lvi~~~~I~~~al~~l~~~~I~~~~~v~~----~~l~~ia~~tGa 115 (632)
+|+|+.++|||||......+.....|..-+..++..... +.++.++.++|.
T Consensus 89 ~E~I~~l~PDLIi~~~~~~~~~~~~l~~i~p~v~~~~~~~~~~~~i~~lg~~~g~ 143 (303)
T 3tny_A 89 VETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKFYAKALNK 143 (303)
T ss_dssp HHHHHHTCCSEEEEEHHHHGGGHHHHHTTSCEEEECCCTTCHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCCEEEEeccchHHHHHHhhcCCcEEEeccCcccHHHHHHHHHHHhCc
Confidence 789999999999998766676777777777776654433 345666666654
Done!