Query psy17076
Match_columns 71
No_of_seqs 104 out of 667
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 21:16:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17076.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17076hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oi8_A Uncharacterized protein 99.2 6E-12 2.1E-16 78.1 2.7 66 3-71 6-71 (156)
2 3lhh_A CBS domain protein; str 99.1 1.1E-11 3.9E-16 78.0 1.8 66 3-71 10-75 (172)
3 3ocm_A Putative membrane prote 99.1 5.6E-11 1.9E-15 75.6 3.8 58 13-71 12-69 (173)
4 3lv9_A Putative transporter; C 99.0 1.4E-10 4.9E-15 70.7 2.4 55 16-71 2-56 (148)
5 3oco_A Hemolysin-like protein 98.7 2.1E-09 7.2E-14 66.0 -0.2 52 19-71 2-53 (153)
6 3t4n_C Nuclear protein SNF4; C 98.6 6.9E-09 2.4E-13 69.8 0.4 56 15-71 7-63 (323)
7 2qrd_G Protein C1556.08C; AMPK 98.4 6.8E-08 2.3E-12 65.2 2.1 53 18-71 2-55 (334)
8 3k6e_A CBS domain protein; str 98.1 6.6E-07 2.3E-11 55.7 1.0 45 26-71 3-48 (156)
9 2v8q_E 5'-AMP-activated protei 98.0 9.9E-07 3.4E-11 59.5 0.1 56 13-71 13-68 (330)
10 3kxr_A Magnesium transporter, 97.9 1E-05 3.4E-10 52.5 4.3 48 19-69 36-83 (205)
11 3jtf_A Magnesium and cobalt ef 97.8 9.7E-06 3.3E-10 48.1 1.8 37 34-71 2-38 (129)
12 3i8n_A Uncharacterized protein 97.7 5.7E-06 1.9E-10 49.1 0.7 38 33-71 2-39 (130)
13 3hf7_A Uncharacterized CBS-dom 97.7 1.5E-05 5.3E-10 47.5 1.9 35 36-71 1-35 (130)
14 3lfr_A Putative metal ION tran 97.7 1.3E-05 4.3E-10 48.1 1.4 36 35-71 1-36 (136)
15 3nqr_A Magnesium and cobalt ef 97.5 3.4E-05 1.2E-09 45.5 1.4 36 35-71 1-36 (127)
16 2yvy_A MGTE, Mg2+ transporter 97.4 0.00011 3.7E-09 49.2 3.1 50 18-70 116-165 (278)
17 2zy9_A Mg2+ transporter MGTE; 97.3 0.00019 6.3E-09 52.1 4.2 50 18-70 136-185 (473)
18 3ctu_A CBS domain protein; str 97.2 9.1E-05 3.1E-09 44.8 1.1 43 28-71 6-48 (156)
19 2emq_A Hypothetical conserved 97.0 0.00028 9.6E-09 42.4 1.8 43 28-71 2-44 (157)
20 3k2v_A Putative D-arabinose 5- 96.7 0.00033 1.1E-08 42.2 0.3 49 22-71 10-61 (149)
21 1yav_A Hypothetical protein BS 96.7 0.00064 2.2E-08 41.2 1.6 44 27-71 3-47 (159)
22 2oux_A Magnesium transporter; 96.6 0.0013 4.3E-08 44.4 2.9 49 18-69 118-166 (286)
23 4esy_A CBS domain containing m 96.5 0.0014 4.8E-08 40.3 2.4 45 22-71 5-49 (170)
24 3lqn_A CBS domain protein; csg 96.5 0.00039 1.3E-08 41.6 -0.2 40 31-71 9-48 (150)
25 4gqw_A CBS domain-containing p 96.5 0.0013 4.6E-08 38.8 2.1 36 35-71 3-38 (152)
26 3org_A CMCLC; transporter, tra 96.2 0.00099 3.4E-08 49.7 0.5 36 35-71 451-487 (632)
27 3sl7_A CBS domain-containing p 95.9 0.0023 7.8E-08 39.0 1.2 35 36-71 3-37 (180)
28 2rc3_A CBS domain; in SITU pro 95.9 0.0012 4.1E-08 38.7 -0.1 33 38-71 7-40 (135)
29 4fry_A Putative signal-transdu 95.4 0.0029 1E-07 38.0 0.3 34 37-71 7-44 (157)
30 2ef7_A Hypothetical protein ST 95.4 0.0079 2.7E-07 34.9 2.2 35 34-71 1-35 (133)
31 2pfi_A Chloride channel protei 95.4 0.0047 1.6E-07 37.0 1.2 42 27-71 3-44 (164)
32 3fhm_A Uncharacterized protein 95.3 0.0036 1.2E-07 38.1 0.4 41 30-71 17-58 (165)
33 3fv6_A YQZB protein; CBS domai 95.3 0.015 5.2E-07 35.1 3.1 51 17-70 60-113 (159)
34 2yzi_A Hypothetical protein PH 95.1 0.01 3.6E-07 34.6 2.1 37 32-71 2-38 (138)
35 2j9l_A Chloride channel protei 95.0 0.0042 1.4E-07 38.0 0.1 37 34-71 8-48 (185)
36 3l2b_A Probable manganase-depe 94.6 0.0089 3E-07 38.6 0.8 35 35-71 183-217 (245)
37 3ddj_A CBS domain-containing p 94.1 0.02 6.8E-07 37.5 1.7 40 29-71 85-124 (296)
38 1pbj_A Hypothetical protein; s 93.7 0.025 8.6E-07 32.2 1.5 53 16-71 43-96 (125)
39 2p9m_A Hypothetical protein MJ 93.7 0.028 9.6E-07 32.6 1.7 35 34-71 5-39 (138)
40 1o50_A CBS domain-containing p 93.7 0.023 7.7E-07 34.1 1.2 36 33-71 12-47 (157)
41 3kh5_A Protein MJ1225; AMPK, A 93.5 0.024 8.3E-07 36.4 1.3 36 33-71 80-115 (280)
42 2rc3_A CBS domain; in SITU pro 92.8 0.074 2.5E-06 30.8 2.5 50 16-70 51-104 (135)
43 2rih_A Conserved protein with 92.5 0.071 2.4E-06 31.2 2.2 32 37-71 5-36 (141)
44 4fry_A Putative signal-transdu 92.4 0.064 2.2E-06 31.9 1.9 52 15-71 54-109 (157)
45 1y5h_A Hypothetical protein RV 92.1 0.047 1.6E-06 31.5 1.0 35 34-71 5-39 (133)
46 3fv6_A YQZB protein; CBS domai 92.0 0.067 2.3E-06 32.1 1.7 40 26-71 8-47 (159)
47 2d4z_A Chloride channel protei 91.9 0.068 2.3E-06 35.7 1.8 36 33-71 9-44 (250)
48 3kpb_A Uncharacterized protein 91.9 0.039 1.3E-06 31.3 0.5 32 37-71 1-32 (122)
49 2o16_A Acetoin utilization pro 91.8 0.072 2.5E-06 32.1 1.7 34 35-71 3-36 (160)
50 1pbj_A Hypothetical protein; s 91.7 0.056 1.9E-06 30.7 1.1 31 38-71 2-32 (125)
51 1zfj_A Inosine monophosphate d 90.9 0.067 2.3E-06 38.3 1.0 42 22-71 80-121 (491)
52 2yzi_A Hypothetical protein PH 90.8 0.26 9E-06 28.4 3.4 50 16-70 50-102 (138)
53 1pvm_A Conserved hypothetical 90.6 0.22 7.7E-06 30.5 3.1 49 17-70 53-105 (184)
54 1o50_A CBS domain-containing p 90.2 0.16 5.4E-06 30.3 2.1 34 33-70 92-125 (157)
55 3gby_A Uncharacterized protein 90.0 0.13 4.6E-06 29.5 1.6 34 35-71 3-36 (128)
56 3lfr_A Putative metal ION tran 89.9 0.11 3.8E-06 30.4 1.2 47 18-70 51-99 (136)
57 2emq_A Hypothetical conserved 89.8 0.24 8.3E-06 29.2 2.7 49 17-70 57-113 (157)
58 1vr9_A CBS domain protein/ACT 89.8 0.082 2.8E-06 33.7 0.6 33 36-71 71-103 (213)
59 3k2v_A Putative D-arabinose 5- 89.4 0.13 4.5E-06 30.4 1.3 50 17-71 74-126 (149)
60 2ef7_A Hypothetical protein ST 89.3 0.29 9.8E-06 28.0 2.7 50 16-70 46-97 (133)
61 2nyc_A Nuclear protein SNF4; b 89.1 0.11 3.7E-06 30.1 0.8 51 17-70 55-113 (144)
62 4gqw_A CBS domain-containing p 89.1 0.15 5.1E-06 29.7 1.4 36 33-71 81-116 (152)
63 3ddj_A CBS domain-containing p 89.1 0.13 4.5E-06 33.6 1.2 36 32-70 15-50 (296)
64 1yav_A Hypothetical protein BS 88.9 0.14 4.7E-06 30.6 1.1 49 17-70 60-116 (159)
65 3lhh_A CBS domain protein; str 88.9 0.63 2.2E-05 28.2 4.2 48 17-70 89-136 (172)
66 3lqn_A CBS domain protein; csg 88.8 0.36 1.2E-05 28.3 2.9 49 17-70 61-117 (150)
67 2o16_A Acetoin utilization pro 88.7 0.38 1.3E-05 28.8 3.0 34 34-70 75-108 (160)
68 3kpb_A Uncharacterized protein 88.6 0.25 8.7E-06 27.8 2.1 49 16-70 44-92 (122)
69 3fhm_A Uncharacterized protein 88.3 0.35 1.2E-05 29.0 2.7 51 16-71 70-124 (165)
70 4fxs_A Inosine-5'-monophosphat 88.2 0.084 2.9E-06 38.5 -0.2 43 21-71 78-120 (496)
71 2uv4_A 5'-AMP-activated protei 88.1 0.37 1.3E-05 28.5 2.7 51 17-70 65-123 (152)
72 1y5h_A Hypothetical protein RV 88.1 0.079 2.7E-06 30.5 -0.4 50 16-70 51-104 (133)
73 3jtf_A Magnesium and cobalt ef 87.6 0.36 1.2E-05 27.8 2.4 32 35-70 67-98 (129)
74 2j9l_A Chloride channel protei 87.5 0.73 2.5E-05 27.7 3.8 34 34-70 105-138 (185)
75 3i8n_A Uncharacterized protein 87.0 0.63 2.1E-05 26.7 3.2 48 17-70 53-101 (130)
76 1pvm_A Conserved hypothetical 86.9 0.33 1.1E-05 29.7 2.0 32 37-71 9-40 (184)
77 3oco_A Hemolysin-like protein 86.6 0.85 2.9E-05 26.9 3.7 48 17-70 68-115 (153)
78 3lv9_A Putative transporter; C 86.4 0.76 2.6E-05 26.9 3.4 48 17-70 70-117 (148)
79 3t4n_C Nuclear protein SNF4; C 86.1 0.33 1.1E-05 32.0 1.8 37 33-70 252-292 (323)
80 2cu0_A Inosine-5'-monophosphat 85.6 0.24 8.3E-06 35.7 1.0 42 22-71 83-124 (486)
81 2rih_A Conserved protein with 85.5 1 3.6E-05 25.9 3.7 48 17-70 51-100 (141)
82 3pc3_A CG1753, isoform A; CBS, 85.1 0.26 8.8E-06 35.7 1.0 35 34-71 381-416 (527)
83 3oi8_A Uncharacterized protein 85.0 0.34 1.1E-05 29.0 1.3 32 35-70 101-132 (156)
84 4avf_A Inosine-5'-monophosphat 84.6 0.19 6.4E-06 36.6 0.0 35 35-70 145-179 (490)
85 2nyc_A Nuclear protein SNF4; b 84.5 0.37 1.3E-05 27.7 1.3 36 33-71 4-42 (144)
86 3nqr_A Magnesium and cobalt ef 84.2 0.46 1.6E-05 27.2 1.6 32 35-70 67-98 (127)
87 3l2b_A Probable manganase-depe 84.1 0.42 1.4E-05 30.6 1.5 33 36-71 6-38 (245)
88 1me8_A Inosine-5'-monophosphat 84.1 0.2 6.9E-06 36.4 0.0 35 35-70 159-193 (503)
89 4esy_A CBS domain containing m 83.7 0.24 8.1E-06 30.0 0.2 34 34-70 102-135 (170)
90 3ghd_A A cystathionine beta-sy 83.3 0.61 2.1E-05 25.1 1.8 34 11-46 29-66 (70)
91 2yzq_A Putative uncharacterize 81.3 0.3 1E-05 31.4 -0.0 31 38-71 2-32 (282)
92 2yzq_A Putative uncharacterize 80.5 0.6 2.1E-05 29.9 1.2 35 33-70 217-251 (282)
93 4fxs_A Inosine-5'-monophosphat 80.1 0.21 7.1E-06 36.4 -1.2 35 35-70 147-181 (496)
94 3hf7_A Uncharacterized CBS-dom 79.1 1.1 3.6E-05 25.9 1.9 48 17-70 49-99 (130)
95 3sl7_A CBS domain-containing p 79.1 0.71 2.4E-05 27.5 1.2 36 33-71 94-129 (180)
96 3ctu_A CBS domain protein; str 78.9 0.29 1E-05 28.9 -0.6 49 17-70 61-116 (156)
97 1vrd_A Inosine-5'-monophosphat 78.5 0.42 1.4E-05 34.3 0.0 34 36-70 154-187 (494)
98 1me8_A Inosine-5'-monophosphat 78.1 0.98 3.3E-05 32.8 1.8 41 22-71 87-128 (503)
99 3usb_A Inosine-5'-monophosphat 76.9 0.77 2.6E-05 33.5 1.0 35 34-70 172-206 (511)
100 3kh5_A Protein MJ1225; AMPK, A 75.7 0.92 3.1E-05 28.8 1.0 32 38-71 4-35 (280)
101 3kxr_A Magnesium transporter, 73.6 1.5 5E-05 27.8 1.6 45 18-70 102-146 (205)
102 1jcn_A Inosine monophosphate d 72.4 0.74 2.5E-05 33.3 -0.0 35 35-70 171-205 (514)
103 4avf_A Inosine-5'-monophosphat 71.8 0.85 2.9E-05 33.1 0.2 42 22-71 78-119 (490)
104 3usb_A Inosine-5'-monophosphat 70.3 0.22 7.6E-06 36.4 -3.2 32 39-71 109-144 (511)
105 2yvy_A MGTE, Mg2+ transporter 67.6 2.1 7.1E-05 28.1 1.3 46 17-70 184-229 (278)
106 2qrd_G Protein C1556.08C; AMPK 64.8 1.9 6.4E-05 28.4 0.7 51 17-70 229-287 (334)
107 2zy9_A Mg2+ transporter MGTE; 61.8 3.1 0.00011 29.8 1.4 45 18-70 205-249 (473)
108 3pc3_A CG1753, isoform A; CBS, 59.9 6.1 0.00021 28.5 2.7 49 17-70 430-481 (527)
109 2oux_A Magnesium transporter; 58.1 3 0.0001 27.6 0.8 34 34-70 198-231 (286)
110 4af0_A Inosine-5'-monophosphat 57.1 2.2 7.6E-05 32.1 0.0 32 35-69 198-229 (556)
111 1vrd_A Inosine-5'-monophosphat 53.7 6 0.00021 28.2 1.8 39 24-70 87-125 (494)
112 1zfj_A Inosine monophosphate d 53.6 6 0.0002 28.1 1.8 34 35-70 150-183 (491)
113 3fio_A A cystathionine beta-sy 51.1 8.7 0.0003 19.2 1.8 29 17-47 35-67 (70)
114 2cu0_A Inosine-5'-monophosphat 42.4 5.3 0.00018 28.7 0.0 42 26-70 133-180 (486)
115 3org_A CMCLC; transporter, tra 42.0 16 0.00054 27.1 2.5 30 38-70 569-598 (632)
116 2qqr_A JMJC domain-containing 30.5 21 0.00072 21.5 1.4 23 33-57 96-118 (118)
117 2ou3_A Tellurite resistance pr 28.4 21 0.00073 21.6 1.1 26 6-33 34-59 (161)
No 1
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.20 E-value=6e-12 Score=78.06 Aligned_cols=66 Identities=9% Similarity=0.162 Sum_probs=59.1
Q ss_pred chhccceeeecccCCCcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 3 KKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 3 ~~~~~l~~~~~~~~~g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.||+.|+. .+.+.|.++++|++++.++++|++.+|++||+||.++++++.++++. ++++.+.++||
T Consensus 6 ~el~~li~--~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~ 71 (156)
T 3oi8_A 6 EDVLNLLR--QAHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAH 71 (156)
T ss_dssp HHHHHHHH--HHHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCC
T ss_pred HHHHHHHH--hHHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCC
Confidence 46777765 45567999999999999999999999999999999999999999999 79999998775
No 2
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.13 E-value=1.1e-11 Score=78.00 Aligned_cols=66 Identities=11% Similarity=0.305 Sum_probs=31.1
Q ss_pred chhccceeeecccCCCcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 3 KKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 3 ~~~~~l~~~~~~~~~g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.|+++|+. .+.+.|.++++|++++.++++|.+.+|++||+|+.++++++.++++. ++++.+.+++|
T Consensus 10 ~el~~l~~--~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~ 75 (172)
T 3lhh_A 10 EDIQAMLQ--EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPH 75 (172)
T ss_dssp -----------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCC
T ss_pred HHHHHHHH--HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCC
Confidence 57777775 45667999999999999999999999999999999999999999999 79999988775
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.10 E-value=5.6e-11 Score=75.61 Aligned_cols=58 Identities=22% Similarity=0.366 Sum_probs=50.2
Q ss_pred cccCCCcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 13 ATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 13 ~~~~~g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.+.+.|.++++|++++.++++|.+.+|++||+|+.++++++.++++. ++++.+.++||
T Consensus 12 ~~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~ 69 (173)
T 3ocm_A 12 AMPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPH 69 (173)
T ss_dssp ------CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSC
T ss_pred hHHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCC
Confidence 45667999999999999999999999999999999999999999999 79999998875
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.99 E-value=1.4e-10 Score=70.70 Aligned_cols=55 Identities=18% Similarity=0.277 Sum_probs=37.2
Q ss_pred CCCcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 16 NLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 16 ~~g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+.|.++++|++++.++++|.+.+|+++|+||.++++++.++++. ++++.+.++++
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~ 56 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGV 56 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCC
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCC
Confidence 56889999999999999999999999999999999999999999 79999998875
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.67 E-value=2.1e-09 Score=66.00 Aligned_cols=52 Identities=13% Similarity=0.291 Sum_probs=43.8
Q ss_pred cCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 19 ALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 19 ~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.++++|++++.++++|++.+|+++|+||.++++++.++++. ++++.+.++++
T Consensus 2 ~l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~ 53 (153)
T 3oco_A 2 NADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQY 53 (153)
T ss_dssp ------CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCC
T ss_pred CcCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCC
Confidence 46788999999999999999999999999999999999999 79999988774
No 6
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.58 E-value=6.9e-09 Score=69.81 Aligned_cols=56 Identities=5% Similarity=0.115 Sum_probs=51.5
Q ss_pred cCCCcCCHHHHHHHHHhhcC-CCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 15 SNLVALKKDEVNIISGALEM-TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 15 ~~~g~i~~~e~~ml~~~l~l-~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.+.|.++++|+.++.++++| ++++|+|+|+||.++++++.+.++. ++++.+.++|+
T Consensus 7 ~~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~ 63 (323)
T 3t4n_C 7 DSQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSI 63 (323)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTC
T ss_pred CCCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCC
Confidence 35577889999999999999 9999999999999999999999999 79999999875
No 7
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.43 E-value=6.8e-08 Score=65.21 Aligned_cols=53 Identities=6% Similarity=0.144 Sum_probs=47.8
Q ss_pred CcCCHHHHHHHHHhhcCCC-ceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 18 VALKKDEVNIISGALEMTQ-KKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 18 g~i~~~e~~ml~~~l~l~d-~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+.++++++.|+.++++|-+ ++|++||+||.++++++.+.++. ++++.+.++||
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~ 55 (334)
T 2qrd_G 2 MDVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNI 55 (334)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTC
T ss_pred CCCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCC
Confidence 3467889999999999655 99999999999999999999999 79999999886
No 8
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.10 E-value=6.6e-07 Score=55.73 Aligned_cols=45 Identities=9% Similarity=0.012 Sum_probs=39.6
Q ss_pred HHHHHhh-cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 26 NIISGAL-EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 26 ~ml~~~l-~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.||...| +|-.++++++||||.++++++.++++. ++++.+.++||
T Consensus 3 ami~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~ 48 (156)
T 3k6e_A 3 AMIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTY 48 (156)
T ss_dssp HHHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSS
T ss_pred chHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCC
Confidence 4666666 377789999999999999999999999 79999999886
No 9
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=97.97 E-value=9.9e-07 Score=59.48 Aligned_cols=56 Identities=7% Similarity=0.157 Sum_probs=41.6
Q ss_pred cccCCCcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 13 ATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 13 ~~~~~g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.+...|.+.+.+++.+.+. |++++|+|||+|+.++++++.++++. +++..+.++||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~ 68 (330)
T 2v8q_E 13 ENEHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGV 68 (330)
T ss_dssp ----------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTC
T ss_pred CChHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCC
Confidence 4556677777777888887 47899999999999999999999999 79999998875
No 10
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.93 E-value=1e-05 Score=52.55 Aligned_cols=48 Identities=4% Similarity=0.016 Sum_probs=44.3
Q ss_pred cCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHc
Q psy17076 19 ALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRT 69 (71)
Q Consensus 19 ~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~s 69 (71)
.+++++++++.++|.|.+.+|+++|+| ++++++.++++. ++++.+.+.
T Consensus 36 ~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~ 83 (205)
T 3kxr_A 36 QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRI 83 (205)
T ss_dssp HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHC
T ss_pred cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhh
Confidence 468999999999999999999999998 799999999999 699998873
No 11
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.75 E-value=9.7e-06 Score=48.10 Aligned_cols=37 Identities=24% Similarity=0.395 Sum_probs=32.8
Q ss_pred CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 34 MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 34 l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.++.+|+++|+|+.++++++.++++. ++++.+.++||
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~ 38 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAH 38 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCC
Confidence 46889999999999999999999999 79999998875
No 12
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.74 E-value=5.7e-06 Score=49.08 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=30.6
Q ss_pred cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 33 EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 33 ~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+|++.+|+++|+|+.++++++.++++. ++++.+.++||
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~ 39 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPF 39 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSC
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCC
Confidence 478999999999999999999999999 79999888764
No 13
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.68 E-value=1.5e-05 Score=47.45 Aligned_cols=35 Identities=14% Similarity=0.318 Sum_probs=31.8
Q ss_pred CceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 36 QKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 36 d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+.+|++||+|+.++++++.++++. ++++.+.+++|
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~ 35 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPH 35 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSS
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCC
Confidence 368999999999999999999999 79999988875
No 14
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=97.67 E-value=1.3e-05 Score=48.08 Aligned_cols=36 Identities=8% Similarity=0.203 Sum_probs=31.7
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
++.+|++||+|+.++++++.++++. ++++.+.++||
T Consensus 1 ~~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~ 36 (136)
T 3lfr_A 1 ADLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAH 36 (136)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCC
T ss_pred CCCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCC
Confidence 3689999999999999999999999 79999998775
No 15
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.48 E-value=3.4e-05 Score=45.45 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=31.6
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
++.+|+++|+|+.++++++.++++. ++++.+.++++
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~ 36 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAH 36 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCC
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCC
Confidence 4689999999999999999999999 79999988775
No 16
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.37 E-value=0.00011 Score=49.18 Aligned_cols=50 Identities=10% Similarity=0.104 Sum_probs=45.7
Q ss_pred CcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 18 VALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 18 g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
+.++..++.++.+++.+.+.+|+++|+| ++++++.++++. ++++.+.+++
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~ 165 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAA 165 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHcc
Confidence 4678899999999999999999999998 899999999999 7999998763
No 17
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.34 E-value=0.00019 Score=52.06 Aligned_cols=50 Identities=10% Similarity=0.104 Sum_probs=46.2
Q ss_pred CcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 18 VALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 18 g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
+.++++++.++.+++++.+.+|+++|+| ++++++.++++. ++++.+.+++
T Consensus 136 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~~~~ 185 (473)
T 2zy9_A 136 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAA 185 (473)
T ss_dssp TSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHHHHG
T ss_pred hcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHHhcc
Confidence 6789999999999999999999999997 899999999999 7999988754
No 18
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.20 E-value=9.1e-05 Score=44.79 Aligned_cols=43 Identities=7% Similarity=-0.102 Sum_probs=37.1
Q ss_pred HHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 28 ISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 28 l~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
-....+|...+|+++|+|+.++++++.++++. ++++.+.++++
T Consensus 6 ~~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~ 48 (156)
T 3ctu_A 6 AKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTY 48 (156)
T ss_dssp HHHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSS
T ss_pred cHHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCC
Confidence 34556788899999999999999999999999 69998887663
No 19
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=96.98 E-value=0.00028 Score=42.43 Aligned_cols=43 Identities=16% Similarity=0.161 Sum_probs=32.3
Q ss_pred HHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 28 ISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 28 l~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
..+...|.+.+|+++|+|+.++++++.+.++. ++++.+.++++
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~ 44 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGY 44 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSS
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCc
Confidence 34566788999999999999999999999999 79999988764
No 20
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=96.67 E-value=0.00033 Score=42.16 Aligned_cols=49 Identities=18% Similarity=0.296 Sum_probs=33.0
Q ss_pred HHHHHHHHHhhcCCCc---eeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 22 KDEVNIISGALEMTQK---KVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 22 ~~e~~ml~~~l~l~d~---~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+++....++.-.++.. +|+++|+|+.++.+++.++++. ++++.+.++++
T Consensus 10 ~~~~~~~~~~~~l~~~l~~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~ 61 (149)
T 3k2v_A 10 AEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNL 61 (149)
T ss_dssp ----------CHHHHHTTSBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTS
T ss_pred HHHhhhcCCCchhchhcccCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCC
Confidence 3444444544444444 9999999999999999999999 79999888764
No 21
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=96.65 E-value=0.00064 Score=41.16 Aligned_cols=44 Identities=18% Similarity=0.258 Sum_probs=33.8
Q ss_pred HHHHh-hcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 27 IISGA-LEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 27 ml~~~-l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
|+... .+|.+.+|+++|+|+.++++++.++++. ++++.+.++++
T Consensus 3 ~~~~~~~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~ 47 (159)
T 1yav_A 3 LISLQSDQLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGY 47 (159)
T ss_dssp --------CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCC
T ss_pred hHHHHHHHHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCC
Confidence 44443 3678899999999999999999999999 79999887764
No 22
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=96.60 E-value=0.0013 Score=44.39 Aligned_cols=49 Identities=14% Similarity=0.188 Sum_probs=44.5
Q ss_pred CcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHc
Q psy17076 18 VALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRT 69 (71)
Q Consensus 18 g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~s 69 (71)
+.++.+++..+.+++.+.+.+|+++|+| ++++++.++++. ++++.+.++
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~ 166 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQ 166 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHc
Confidence 4578889999999999999999999997 799999999999 799998876
No 23
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=96.49 E-value=0.0014 Score=40.30 Aligned_cols=45 Identities=16% Similarity=0.245 Sum_probs=36.5
Q ss_pred HHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 22 KDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 22 ~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+..+..+..++ ++.+|+|||++ ++++++.++++. ++++.+.++++
T Consensus 5 ~~~~~~~~~~l--~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~ 49 (170)
T 4esy_A 5 QARRRAIARAI--RQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQI 49 (170)
T ss_dssp HHHHHHHHHHH--HTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTC
T ss_pred HHHHHHHHHHH--cCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCC
Confidence 34455566554 68999999986 789999999999 79999998875
No 24
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=96.48 E-value=0.00039 Score=41.57 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=35.1
Q ss_pred hhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 31 ALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 31 ~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.-.|.+.+|+++|+|+.++++++.++++. ++++.+.++++
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~ 48 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGY 48 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTC
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCC
Confidence 34577899999999999999999999999 79999887764
No 25
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=96.46 E-value=0.0013 Score=38.79 Aligned_cols=36 Identities=22% Similarity=0.232 Sum_probs=32.4
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+..+|+++|+|+.++++++.++++. ++++.+.++++
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~ 38 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRI 38 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTC
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCC
Confidence 4678999999999999999999999 79999988764
No 26
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=96.18 E-value=0.00099 Score=49.74 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=32.8
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHH-HcCC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIV-RTGE 71 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~-~sgh 71 (71)
.+.+|+|+|+||+++.+++.++++. ++.+.+. +++|
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~ 487 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNR 487 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTC
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCc
Confidence 6789999999999999999999999 7999988 6765
No 27
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=95.94 E-value=0.0023 Score=38.97 Aligned_cols=35 Identities=14% Similarity=0.163 Sum_probs=31.3
Q ss_pred CceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 36 QKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 36 d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
-.+|+++|+|+.++++++.++++. ++++.+.++++
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~ 37 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKV 37 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCC
Confidence 368999999999999999999999 79999988764
No 28
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=95.93 E-value=0.0012 Score=38.73 Aligned_cols=33 Identities=3% Similarity=0.128 Sum_probs=29.7
Q ss_pred eeecceeec-ccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 38 KVEEIMTKL-DDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 38 ~V~eIMtPR-~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+|+++|+|| .++.+++.++++. ++++.+.++++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~ 40 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNI 40 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTC
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCC
Confidence 899999998 8999999999999 79999887663
No 29
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=95.44 E-value=0.0029 Score=38.00 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=30.6
Q ss_pred ceeecceeec----ccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 37 KKVEEIMTKL----DDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 37 ~~V~eIMtPR----~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
++|+++|+|+ .++.+++.++++. ++++.+.++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~ 44 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGI 44 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTC
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCC
Confidence 6899999999 8999999999999 79999888764
No 30
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=95.43 E-value=0.0079 Score=34.93 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=30.1
Q ss_pred CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 34 MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 34 l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
|++.+|+++|+| ++.+++.++++. ++++.+.++|+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~ 35 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNI 35 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTC
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCC
Confidence 468899999998 588999999999 79999887764
No 31
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=95.42 E-value=0.0047 Score=36.99 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=31.2
Q ss_pred HHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 27 IISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 27 ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+..+.+.+...+|+++|+| ++++++.++++. ++++.+.++++
T Consensus 3 l~~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~ 44 (164)
T 2pfi_A 3 ILGRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDV 44 (164)
T ss_dssp -------CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCC
T ss_pred CccccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCC
Confidence 4456678889999999998 788899999999 79999887764
No 32
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=95.29 E-value=0.0036 Score=38.13 Aligned_cols=41 Identities=5% Similarity=0.041 Sum_probs=35.3
Q ss_pred HhhcCCCceeecceeec-ccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 30 GALEMTQKKVEEIMTKL-DDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 30 ~~l~l~d~~V~eIMtPR-~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
....+...+|+++|+|+ .++.+++.++++. ++++.+.++++
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~ 58 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKI 58 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTC
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCC
Confidence 34567889999999998 8899999999999 79999887763
No 33
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=95.26 E-value=0.015 Score=35.08 Aligned_cols=51 Identities=16% Similarity=0.277 Sum_probs=40.4
Q ss_pred CCcCCHHHHHHHHHh---hcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGA---LEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~---l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++. .+++... -...+.+|+++|+|+.++++++.++++. ++++.+.+++
T Consensus 60 ~Givt~--~dl~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~ 113 (159)
T 3fv6_A 60 VGVLSR--KDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQ 113 (159)
T ss_dssp EEEEEH--HHHHHHHTSCSCTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHT
T ss_pred EEEEeH--HHHHHHhhccCcccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcC
Confidence 466664 4555544 2457889999999999999999999999 7999988776
No 34
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=95.14 E-value=0.01 Score=34.61 Aligned_cols=37 Identities=11% Similarity=0.027 Sum_probs=31.5
Q ss_pred hcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 32 LEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 32 l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+.|...+|+++|++ ++.+++.++++. ++++.+.++++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~ 38 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDV 38 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTC
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 56889999999984 789999999999 69999887763
No 35
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=95.03 E-value=0.0042 Score=38.01 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=31.5
Q ss_pred CCCceeecceeeccc--EEEe--eCCCCccHHHHHHHHHcCC
Q psy17076 34 MTQKKVEEIMTKLDD--CYML--DIETILNFTVISEIVRTGE 71 (71)
Q Consensus 34 l~d~~V~eIMtPR~~--v~~l--~~~~~l~~~~~~~i~~sgh 71 (71)
+.+.+|++||+|..+ ++++ +.++++. ++++.+.++++
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~ 48 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTY 48 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCC
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCC
Confidence 368899999999976 7888 9999999 79999988764
No 36
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=94.56 E-value=0.0089 Score=38.63 Aligned_cols=35 Identities=20% Similarity=0.272 Sum_probs=31.4
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
...+|++||+| .++++++.+.++. ++++.+.++++
T Consensus 183 ~~~~v~~im~~-~~~~~~~~~~~~~-~~~~~m~~~~~ 217 (245)
T 3l2b_A 183 QSLPVDYVMTK-DNLVAVSTDDLVE-DVKVTMSETRY 217 (245)
T ss_dssp GGSBHHHHSBC-TTCCCEETTSBHH-HHHHHHHHHCC
T ss_pred cCCceeeEecC-CccEEECCCCcHH-HHHHHHHhcCC
Confidence 46789999999 8999999999999 79999998775
No 37
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=94.10 E-value=0.02 Score=37.54 Aligned_cols=40 Identities=13% Similarity=0.035 Sum_probs=33.6
Q ss_pred HHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 29 SGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 29 ~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.+.+++.+.+|+++|+| ++++++.++++. ++++.+.++|+
T Consensus 85 ~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~ 124 (296)
T 3ddj_A 85 GDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNF 124 (296)
T ss_dssp HHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTC
T ss_pred hhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCC
Confidence 34456778999999998 788999999999 79999988764
No 38
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=93.74 E-value=0.025 Score=32.21 Aligned_cols=53 Identities=15% Similarity=0.219 Sum_probs=38.7
Q ss_pred CCCcCCHHHH-HHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 16 NLVALKKDEV-NIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 16 ~~g~i~~~e~-~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
-.|.++..+. ..+.+-.++.+.+|+++|+| .+.+++.++++. ++++.+.++++
T Consensus 43 ~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~ 96 (125)
T 1pbj_A 43 RVGIVTTWDVLEAIAEGDDLAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVV 96 (125)
T ss_dssp EEEEEEHHHHHHHHHHTCCTTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTC
T ss_pred eEEEEeHHHHHHHHhcCCcccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCC
Confidence 3466766542 22333345678999999997 688999999999 79999887763
No 39
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=93.70 E-value=0.028 Score=32.61 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=29.8
Q ss_pred CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 34 MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 34 l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
|.+.+|+++|+| ++.+++.++++. ++++.+.++++
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~ 39 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKI 39 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCC
Confidence 568899999986 788899999999 69998887653
No 40
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=93.66 E-value=0.023 Score=34.15 Aligned_cols=36 Identities=14% Similarity=0.263 Sum_probs=30.8
Q ss_pred cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 33 EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 33 ~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.+...+|+++|+| ++++++.++++. ++++.+.++++
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~ 47 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPV 47 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTT
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCC
Confidence 3577899999987 799999999999 79999987763
No 41
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=93.54 E-value=0.024 Score=36.41 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=31.2
Q ss_pred cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 33 EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 33 ~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+..+.+|+++|+| ++++++.+.++. ++++.+.++|+
T Consensus 80 ~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~ 115 (280)
T 3kh5_A 80 AAINEPVREIMEE--NVITLKENADID-EAIETFLTKNV 115 (280)
T ss_dssp HHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTC
T ss_pred HHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCC
Confidence 4447899999998 889999999999 79999988774
No 42
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=92.78 E-value=0.074 Score=30.80 Aligned_cols=50 Identities=16% Similarity=0.244 Sum_probs=38.2
Q ss_pred CCCcCCHHHHHHHHHhh----cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 16 NLVALKKDEVNIISGAL----EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 16 ~~g~i~~~e~~ml~~~l----~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
-.|.++.. +++..++ ...+.+|+++|+| ++.+++.++++. ++++.+.+++
T Consensus 51 ~~Givt~~--dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~ 104 (135)
T 2rc3_A 51 LVGILTER--DFSRKSYLLDKPVKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMR 104 (135)
T ss_dssp EEEEEEHH--HHHHHGGGSSSCGGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHT
T ss_pred EEEEEehH--HHHHHHHHcCCCcccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhC
Confidence 34667654 4554443 3578999999997 678999999999 7999988776
No 43
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=92.51 E-value=0.071 Score=31.16 Aligned_cols=32 Identities=13% Similarity=0.220 Sum_probs=27.8
Q ss_pred ceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 37 KKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 37 ~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.+|+++|+| ++.+++.++++. ++++.+.++++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~ 36 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRV 36 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCC
Confidence 589999996 789999999999 69999887663
No 44
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=92.36 E-value=0.064 Score=31.95 Aligned_cols=52 Identities=12% Similarity=0.113 Sum_probs=38.9
Q ss_pred cCCCcCCHHHHHHHHHhh----cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 15 SNLVALKKDEVNIISGAL----EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 15 ~~~g~i~~~e~~ml~~~l----~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.-.|.++. .+++..+. +..+.+|+++|+| ++++++.++++. ++++.+.++++
T Consensus 54 ~~~Givt~--~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~ 109 (157)
T 4fry_A 54 DIAGIVTE--RDYARKVVLQERSSKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRM 109 (157)
T ss_dssp SEEEEEEH--HHHHHHSGGGTCCSSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTC
T ss_pred EEEEEEEH--HHHHHHHHhccCCccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCC
Confidence 33466665 44554443 3568999999997 688999999999 79999988763
No 45
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=92.06 E-value=0.047 Score=31.52 Aligned_cols=35 Identities=11% Similarity=0.107 Sum_probs=27.8
Q ss_pred CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 34 MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 34 l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+.-.+|+++|++ ++.+++.++++. ++++.+.++++
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~ 39 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDI 39 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTC
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCC
Confidence 455799999996 788999999999 79999887653
No 46
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=91.99 E-value=0.067 Score=32.13 Aligned_cols=40 Identities=5% Similarity=0.149 Sum_probs=30.9
Q ss_pred HHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 26 NIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 26 ~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
..+... |...+|+++|++ .++++.++++. ++++.+.++++
T Consensus 8 ~~l~~~--l~~~~v~~im~~---~~~v~~~~~~~-~a~~~m~~~~~ 47 (159)
T 3fv6_A 8 QLLADK--LKKLQVKDFQSI---PVVIHENVSVY-DAICTMFLEDV 47 (159)
T ss_dssp HHHHHH--HTTCBGGGSCBC---CCEEETTSBHH-HHHHHHHHHTC
T ss_pred HHHHHH--HhhCCHHHHcCC---CEEECCCCcHH-HHHHHHHHCCC
Confidence 334444 467899999996 34899999999 79999887763
No 47
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=91.94 E-value=0.068 Score=35.74 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=31.1
Q ss_pred cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 33 EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 33 ~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.....+|+|||++ +++++..++++. ++.+.+.+++|
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~ 44 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKL 44 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCC
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCC
Confidence 3567899999986 799999999999 79999988775
No 48
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=91.91 E-value=0.039 Score=31.32 Aligned_cols=32 Identities=9% Similarity=0.115 Sum_probs=27.1
Q ss_pred ceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 37 KKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 37 ~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
++|+++|+| ++++++.++++. ++++.+.++++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~ 32 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNI 32 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTC
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCC
Confidence 468999997 688999999999 79999887753
No 49
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=91.78 E-value=0.072 Score=32.09 Aligned_cols=34 Identities=24% Similarity=0.105 Sum_probs=28.9
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
...+|+++|+| ++++++.++++. ++++.+.++++
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~ 36 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDI 36 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 45789999997 788999999999 79998887653
No 50
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=91.74 E-value=0.056 Score=30.70 Aligned_cols=31 Identities=29% Similarity=0.522 Sum_probs=26.8
Q ss_pred eeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 38 KVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 38 ~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+|+++|+| ++.+++.++++. ++++.+.++++
T Consensus 2 ~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~ 32 (125)
T 1pbj_A 2 RVEDVMVT--DVDTIDITASLE-DVLRNYVENAK 32 (125)
T ss_dssp CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCC
T ss_pred CHHHhcCC--CceEECCCCcHH-HHHHHHHHcCC
Confidence 68899987 789999999999 79999887663
No 51
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=90.86 E-value=0.067 Score=38.33 Aligned_cols=42 Identities=12% Similarity=0.073 Sum_probs=35.7
Q ss_pred HHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 22 KDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 22 ~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+++++++.+++++ +++|+| ++++++.+.++. ++++.+.+++|
T Consensus 80 e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 80 TEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp HHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred HHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 6778999988876 679997 889999999999 79999988764
No 52
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=90.77 E-value=0.26 Score=28.38 Aligned_cols=50 Identities=22% Similarity=0.282 Sum_probs=37.1
Q ss_pred CCCcCCHHHHHHHHHhhc---CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 16 NLVALKKDEVNIISGALE---MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 16 ~~g~i~~~e~~ml~~~l~---l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
-.|.++.. +++..++. ..+.+|+++|.| .+.+++.++++. ++++.+.+++
T Consensus 50 ~~Givt~~--dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~ 102 (138)
T 2yzi_A 50 VVGFFTKS--DIIRRVIVPGLPYDIPVERIMTR--NLITANVNTPLG-EVLRKMAEHR 102 (138)
T ss_dssp EEEEEEHH--HHHHHTTTTCCCTTSBGGGTCBC--SCCEEETTSBHH-HHHHHHHHHT
T ss_pred EEEEEeHH--HHHHHHHhcCCcccCCHHHHhhC--CCeEECCCCcHH-HHHHHHHhcC
Confidence 34666654 45544432 457899999987 678999999999 6999988776
No 53
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=90.59 E-value=0.22 Score=30.52 Aligned_cols=49 Identities=14% Similarity=0.155 Sum_probs=37.8
Q ss_pred CCcCCHHHHHHHHHhh----cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGAL----EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l----~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++. .+++.... ...+.+|+++|.| .+++++.++++. ++++.+.+++
T Consensus 53 vGivt~--~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~ 105 (184)
T 1pvm_A 53 VGLLSE--RSIIKRFIPRNKKPDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENG 105 (184)
T ss_dssp EEEEEH--HHHHHHTGGGCCCGGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHT
T ss_pred EEEEeH--HHHHHHHhhcccCcccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcC
Confidence 466665 45555544 3577899999987 678999999999 7999988775
No 54
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=90.20 E-value=0.16 Score=30.30 Aligned_cols=34 Identities=18% Similarity=0.314 Sum_probs=29.6
Q ss_pred cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 33 EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 33 ~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
...+.+|+++|+| +.+++.++++. ++++.+.+++
T Consensus 92 ~~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~ 125 (157)
T 1o50_A 92 RLIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNN 125 (157)
T ss_dssp CCSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHT
T ss_pred HHcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCC
Confidence 3567899999998 88999999999 7999988776
No 55
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=90.00 E-value=0.13 Score=29.53 Aligned_cols=34 Identities=3% Similarity=-0.004 Sum_probs=28.8
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
...+|+++|++. +.+++.++++. ++++.+.++++
T Consensus 3 ~s~~v~~~m~~~--~~~v~~~~~~~-~a~~~~~~~~~ 36 (128)
T 3gby_A 3 ASVTFSYLAETD--YPVFTLGGSTA-DAARRLAASGC 36 (128)
T ss_dssp TTCBGGGGCBCC--SCCEETTSBHH-HHHHHHHHHTC
T ss_pred cceEHHHhhcCC--cceECCCCCHH-HHHHHHHHCCC
Confidence 467999999876 78889999999 79999988764
No 56
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=89.86 E-value=0.11 Score=30.39 Aligned_cols=47 Identities=13% Similarity=0.175 Sum_probs=34.2
Q ss_pred CcCCHHHHHHHHHhh--cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 18 VALKKDEVNIISGAL--EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 18 g~i~~~e~~ml~~~l--~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
|.++. ++++.... ...+.+|+++|.| +.+++.++++. ++++.+.+++
T Consensus 51 Givt~--~dl~~~~~~~~~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~ 99 (136)
T 3lfr_A 51 GVLLA--KDLLPLILKADGDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANH 99 (136)
T ss_dssp EEEEG--GGGGGGGGSSSGGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHT
T ss_pred EEEEH--HHHHHHHHhccCCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcC
Confidence 55544 24444333 3467789999976 78999999999 7999988765
No 57
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=89.83 E-value=0.24 Score=29.18 Aligned_cols=49 Identities=20% Similarity=0.268 Sum_probs=36.6
Q ss_pred CCcCCHHHHHHHHHhhc--------CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGALE--------MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l~--------l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++. .+++..... +.+.+|+++|.| ++.+++.++++. ++++.+.+++
T Consensus 57 ~Givt~--~dl~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~ 113 (157)
T 2emq_A 57 HGLISM--TMMMDAILGLERIEFERLETMKVEEVMNR--NIPRLRLDDSLM-KAVGLIVNHP 113 (157)
T ss_dssp EEEEEH--HHHHHHSBCSSSBCGGGGGTCBGGGTCBC--CCCEEETTSBHH-HHHHHHHHSS
T ss_pred EEEeeH--HHHHHHHhcccccchHHhcCCcHHHHhCC--CCceecCCCcHH-HHHHHHhhCC
Confidence 356654 345544332 467899999997 678999999999 7999988765
No 58
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=89.75 E-value=0.082 Score=33.68 Aligned_cols=33 Identities=9% Similarity=0.103 Sum_probs=28.3
Q ss_pred CceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 36 QKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 36 d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+.+|+++|+| ++++++.++++. ++++.+.++++
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~ 103 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQE 103 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCC
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCC
Confidence 4479999998 788999999999 79999888763
No 59
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=89.38 E-value=0.13 Score=30.41 Aligned_cols=50 Identities=8% Similarity=0.106 Sum_probs=36.6
Q ss_pred CCcCCHHHHHHHHHh---hcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 17 LVALKKDEVNIISGA---LEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~---l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.|.++.. +++... .++.+.+|+++|+|. +.+++.++++. ++++.+.++++
T Consensus 74 ~Givt~~--dl~~~~~~~~~~~~~~v~~~m~~~--~~~v~~~~~l~-~a~~~m~~~~~ 126 (149)
T 3k2v_A 74 IGIFTDG--DLRRVFDTGVDMRDASIADVMTRG--GIRIRPGTLAV-DALNLMQSRHI 126 (149)
T ss_dssp EEEEEHH--HHHHHHCSSSCCTTCBHHHHSEES--CCEECTTCBHH-HHHHHHHHHTC
T ss_pred EEEecHH--HHHHHHhcCCCcccCcHHHHcCCC--CeEECCCCCHH-HHHHHHHHcCC
Confidence 4666654 344332 245688999999975 58899999999 79999988763
No 60
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=89.35 E-value=0.29 Score=28.05 Aligned_cols=50 Identities=12% Similarity=0.180 Sum_probs=35.8
Q ss_pred CCCcCCHHHHHHHHHhhc--CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 16 NLVALKKDEVNIISGALE--MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 16 ~~g~i~~~e~~ml~~~l~--l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
-.|.++..+ ++....+ ..+.+|+++|.| .+.+++.++++. ++++.+.+++
T Consensus 46 ~~Givt~~d--l~~~~~~~~~~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~ 97 (133)
T 2ef7_A 46 PVGIITERD--IVKAIGKGKSLETKAEEFMTA--SLITIREDSPIT-GALALMRQFN 97 (133)
T ss_dssp EEEEEEHHH--HHHHHHTTCCTTCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHT
T ss_pred EEEEEcHHH--HHHHHhcCCCcccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcC
Confidence 346676554 3332221 236899999987 788999999999 7999988776
No 61
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=89.14 E-value=0.11 Score=30.07 Aligned_cols=51 Identities=12% Similarity=0.179 Sum_probs=35.1
Q ss_pred CCcCCHHHHHHHHHh----hcCCCceeecceeecc----cEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGA----LEMTQKKVEEIMTKLD----DCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~----l~l~d~~V~eIMtPR~----~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++..+ ++... +...+.+|+++|+++. ++.+++.++++. ++++.+.+++
T Consensus 55 ~Givt~~d--l~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~ 113 (144)
T 2nyc_A 55 INVYEAYD--VLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLS-TIMDNIRKAR 113 (144)
T ss_dssp EEEEEHHH--HHHHHHTC----CCSBHHHHHHHCC------CEECTTSBHH-HHHHHHHHHT
T ss_pred EEEEcHHH--HHHHhcccccccCCccHHHHHhcCccccCCCeEECCCCcHH-HHHHHHHHCC
Confidence 46666543 33322 2345789999999874 789999999999 7999988765
No 62
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=89.09 E-value=0.15 Score=29.66 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=28.6
Q ss_pred cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 33 EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 33 ~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
...+.+|+++|.| .+++++.++++. ++++.+.++++
T Consensus 81 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~ 116 (152)
T 4gqw_A 81 KTNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKY 116 (152)
T ss_dssp ---CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSC
T ss_pred HhccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCC
Confidence 3456899999998 567899999999 79999988763
No 63
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=89.07 E-value=0.13 Score=33.56 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=30.8
Q ss_pred hcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 32 LEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 32 l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.+....+|+|||++ ++.+++.++++. ++++.+.+.+
T Consensus 15 ~~~~~~~V~dim~~--~~~~v~~~~~v~-~a~~~m~~~~ 50 (296)
T 3ddj_A 15 LYFQGMNIETLMIK--NPPILSKEDRLG-SAFKKINEGG 50 (296)
T ss_dssp CTTCCSSGGGTCEE--SCCEECTTSBHH-HHHHHTTGGG
T ss_pred hhhcccCHHHhccC--CCcEECCCccHH-HHHHHHHHCC
Confidence 35677899999998 789999999999 6999887765
No 64
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=88.94 E-value=0.14 Score=30.59 Aligned_cols=49 Identities=20% Similarity=0.243 Sum_probs=36.7
Q ss_pred CCcCCHHHHHHHHHhhc--------CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGALE--------MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l~--------l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++. .+++..... ..+.+|+++|.| .+.+++.++++. ++++.+.+++
T Consensus 60 vGivt~--~dl~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~ 116 (159)
T 1yav_A 60 HGLIGT--NMIMNSIFGLERIEFEKLDQITVEEVMLT--DIPRLHINDPIM-KGFGMVINNG 116 (159)
T ss_dssp EEEEEH--HHHHHHHBCSSSBCGGGTTTSBHHHHSBC--SCCEEETTSBHH-HHHHHTTTCS
T ss_pred EEEeEH--HHHHHHhhhhcccchhhhccCCHHHhcCC--CCceEcCCCCHH-HHHHHHHhCC
Confidence 366654 355555443 568899999998 678999999999 6998877654
No 65
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=88.85 E-value=0.63 Score=28.23 Aligned_cols=48 Identities=8% Similarity=0.212 Sum_probs=36.5
Q ss_pred CCcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++. ++++.....-.+.+|+++| ..+.+++.++++. ++++.+.+++
T Consensus 89 vGivt~--~dl~~~~~~~~~~~v~~im---~~~~~v~~~~~l~-~a~~~m~~~~ 136 (172)
T 3lhh_A 89 VGIISA--KQLLSESIAGERLELVDLV---KNCNFVPNSLSGM-ELLEHFRTTG 136 (172)
T ss_dssp EEEEEH--HHHHHHHHTTCCCCGGGGC---BCCEEEETTCCHH-HHHHHHHHHT
T ss_pred EEEEEH--HHHHHHHhhcCcccHHHHh---cCCeEeCCCCCHH-HHHHHHHHcC
Confidence 466654 4555555554588999999 4678999999999 6999988765
No 66
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=88.82 E-value=0.36 Score=28.26 Aligned_cols=49 Identities=20% Similarity=0.344 Sum_probs=37.3
Q ss_pred CCcCCHHHHHHHHHhh--------cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGAL--------EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l--------~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++. .+++.... ...+.+|+++|.+ ++.+++.++++. ++++.+.+++
T Consensus 61 ~Givt~--~dl~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~ 117 (150)
T 3lqn_A 61 HGLIST--AMILDGILGLERIEFERLEEMKVEQVMKQ--DIPVLKLEDSFA-KALEMTIDHP 117 (150)
T ss_dssp EEEEEH--HHHHHHTBCSSSBCGGGGGGCBGGGTCBS--SCCEEETTCBHH-HHHHHHHHCS
T ss_pred EEEEEH--HHHHHHHHhhcccchhHHhcCCHHHHhcC--CCceeCCCCCHH-HHHHHHHhCC
Confidence 466654 45665554 2467899999994 678999999999 7999988775
No 67
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=88.65 E-value=0.38 Score=28.78 Aligned_cols=34 Identities=12% Similarity=0.059 Sum_probs=29.3
Q ss_pred CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 34 MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 34 l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
..+.+|+++|+| .+++++.++++. ++++.+.+++
T Consensus 75 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~ 108 (160)
T 2o16_A 75 AFETPLFEVMHT--DVTSVAPQAGLK-ESAIYMQKHK 108 (160)
T ss_dssp -CCCBHHHHSCS--CEEEBCTTSBHH-HHHHHHHHTT
T ss_pred hcccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhC
Confidence 467899999996 789999999999 7999988776
No 68
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=88.63 E-value=0.25 Score=27.77 Aligned_cols=49 Identities=16% Similarity=0.206 Sum_probs=35.6
Q ss_pred CCCcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 16 NLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 16 ~~g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
-.|.++.. +++.... -...+|+++|.| ++..++.++++. ++++.+.+++
T Consensus 44 ~~G~vt~~--dl~~~~~-~~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~ 92 (122)
T 3kpb_A 44 LVGIITSW--DIAKALA-QNKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYN 92 (122)
T ss_dssp EEEEECHH--HHHHHHH-TTCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHT
T ss_pred EEEEEEHH--HHHHHHH-hcccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhC
Confidence 34667654 3443333 345589999987 678899999999 7999988775
No 69
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=88.34 E-value=0.35 Score=29.02 Aligned_cols=51 Identities=12% Similarity=0.116 Sum_probs=37.8
Q ss_pred CCCcCCHHHHHHHHHhh----cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 16 NLVALKKDEVNIISGAL----EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 16 ~~g~i~~~e~~ml~~~l----~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
-.|.++.. +++..+. ...+.+|+++|.+ ++.+++.++++. ++++.+.++++
T Consensus 70 ~~Givt~~--dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~ 124 (165)
T 3fhm_A 70 VLGIFTER--DLVKAVAGQGAASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRF 124 (165)
T ss_dssp EEEEEEHH--HHHHHHHHHGGGGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTC
T ss_pred EEEEEEHH--HHHHHHHhcCCccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 34677654 3433332 5678999999994 678899999999 79999988763
No 70
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=88.16 E-value=0.084 Score=38.54 Aligned_cols=43 Identities=12% Similarity=0.040 Sum_probs=35.0
Q ss_pred CHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 21 KKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 21 ~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.+++.+++.++ ++++++|+ .++++++.+.++. ++++.+.+++|
T Consensus 78 ~e~qa~~V~~V-----k~~~~~m~--~d~v~v~~~~tv~-ea~~~m~~~~~ 120 (496)
T 4fxs_A 78 IEQQAAQVHQV-----KIFEAGVV--THPVTVRPEQTIA-DVMELTHYHGF 120 (496)
T ss_dssp HHHHHHHHHHH-----HHCCC--C--BCCCCBCSSSBHH-HHHHHHTSSCC
T ss_pred HHHHHHHHHhc-----cccccccc--cCceEECCCCCHH-HHHHHHHHcCC
Confidence 56778999998 66789999 6889999999999 79999988775
No 71
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=88.11 E-value=0.37 Score=28.46 Aligned_cols=51 Identities=16% Similarity=0.180 Sum_probs=37.5
Q ss_pred CCcCCHHHHHHHHHhh----cCCCceeecceeec----ccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGAL----EMTQKKVEEIMTKL----DDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l----~l~d~~V~eIMtPR----~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++.. +++.... +..+.+|+++|.|+ .++.+++.++++. ++++.+.+++
T Consensus 65 vGivt~~--dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~ 123 (152)
T 2uv4_A 65 VDIYSKF--DVINLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAE 123 (152)
T ss_dssp EEEEEHH--HHHHHHHCSSCCCTTSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHT
T ss_pred EEEEeHH--HHHHHhcchhhhhhcchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcC
Confidence 4666654 3444332 23467899999986 6889999999999 6999988765
No 72
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=88.09 E-value=0.079 Score=30.52 Aligned_cols=50 Identities=12% Similarity=0.209 Sum_probs=36.9
Q ss_pred CCCcCCHHHHHHHHHhh----cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 16 NLVALKKDEVNIISGAL----EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 16 ~~g~i~~~e~~ml~~~l----~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
-.|.++.. +++..++ ...+.+|+++|.| .+.+++.++++. ++++.+.+++
T Consensus 51 ~~Givt~~--dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~ 104 (133)
T 1y5h_A 51 LHGMLTDR--DIVIKGLAAGLDPNTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQ 104 (133)
T ss_dssp EEEEEEHH--HHHHTTGGGTCCTTTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHT
T ss_pred EEEEEeHH--HHHHHHHhcCCCccccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcC
Confidence 34666654 4443232 3457899999987 788999999999 7999988776
No 73
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=87.60 E-value=0.36 Score=27.79 Aligned_cols=32 Identities=9% Similarity=0.174 Sum_probs=27.6
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.+.+|+++|.| +++++.++++. ++++.+.+++
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~ 98 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASR 98 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSS
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcC
Confidence 57789999976 78999999999 7999988765
No 74
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=87.46 E-value=0.73 Score=27.68 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=29.4
Q ss_pred CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 34 MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 34 l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
....+|+++|.+ ++.+++.++++. ++++.+.+++
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~ 138 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPME-IVVDIFRKLG 138 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHH-HHHHHHHHHT
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHH-HHHHHHHhCC
Confidence 467899999986 588999999999 7999988776
No 75
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=87.02 E-value=0.63 Score=26.70 Aligned_cols=48 Identities=13% Similarity=0.136 Sum_probs=35.2
Q ss_pred CCcCCHHHHHHHHHhhc-CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGALE-MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l~-l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++.. +++....+ ..+.+|+++|.| +++++.++++. ++++.+.+++
T Consensus 53 ~Givt~~--dl~~~~~~~~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~ 101 (130)
T 3i8n_A 53 IGFVHRL--ELFKMQQSGSGQKQLGAVMRP---IQVVLNNTALP-KVFDQMMTHR 101 (130)
T ss_dssp EEECCHH--HHHHHHHTTTTTSBHHHHSEE---CCEEETTSCHH-HHHHHHHHHT
T ss_pred EEEEEHH--HHHHHHhcCCCcCCHHHHhcC---CcCcCCCCcHH-HHHHHHHHcC
Confidence 4677654 44444332 247899999965 68999999999 6999988765
No 76
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=86.89 E-value=0.33 Score=29.72 Aligned_cols=32 Identities=16% Similarity=0.194 Sum_probs=27.9
Q ss_pred ceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 37 KKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 37 ~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
.+|+++|++ ++++++.++++. ++++.+.++++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~ 40 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHL 40 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTC
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 789999984 799999999999 79999887664
No 77
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=86.62 E-value=0.85 Score=26.93 Aligned_cols=48 Identities=17% Similarity=0.127 Sum_probs=35.9
Q ss_pred CCcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++.. +++.....-.+.+|+++| ..+.+++.++++. ++++.+.+++
T Consensus 68 vGivt~~--dl~~~~~~~~~~~v~~~m---~~~~~v~~~~~l~-~~~~~m~~~~ 115 (153)
T 3oco_A 68 IGYAYNY--DIVRQARIDDKAKISTIM---RDIVSVPENMKVP-DVMEEMSAHR 115 (153)
T ss_dssp EEEEEHH--HHHHHHHHHTTSBGGGTC---BCCEEEETTSBHH-HHHHHHHHTT
T ss_pred EEEEEHH--HHHhHHhcCCCCcHHHHh---CCCeEECCCCCHH-HHHHHHHHcC
Confidence 4666654 444444433488999999 3688999999999 6999988776
No 78
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=86.44 E-value=0.76 Score=26.86 Aligned_cols=48 Identities=13% Similarity=0.244 Sum_probs=35.1
Q ss_pred CCcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++.. +++....+-.+.+|+++| ..+.+++.++++. ++++.+.+++
T Consensus 70 vGivt~~--dl~~~~~~~~~~~v~~~m---~~~~~v~~~~~l~-~~~~~m~~~~ 117 (148)
T 3lv9_A 70 LGFVHIR--DLYNQKINENKIELEEIL---RDIIYISENLTID-KALERIRKEK 117 (148)
T ss_dssp EEEEEHH--HHHHHHHHHSCCCGGGTC---BCCEEEETTSBHH-HHHHHHHHHT
T ss_pred EEEEEHH--HHHHHHhcCCCccHHHhc---CCCeEECCCCCHH-HHHHHHHhcC
Confidence 4666654 444444333388999999 3578999999999 6999988765
No 79
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=86.05 E-value=0.33 Score=31.98 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=32.3
Q ss_pred cCCCceeecceeecc----cEEEeeCCCCccHHHHHHHHHcC
Q psy17076 33 EMTQKKVEEIMTKLD----DCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 33 ~l~d~~V~eIMtPR~----~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
+..+.+|+++|+++. .+++++.++++. ++++.+.+++
T Consensus 252 ~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~ 292 (323)
T 3t4n_C 252 NDLSLSVGEALMRRSDDFEGVYTCTKNDKLS-TIMDNIRKAR 292 (323)
T ss_dssp HHTTSBHHHHGGGSCTTCCCCEEECTTCBHH-HHHHHHHHSC
T ss_pred hhccCCHHHHHhhccccCCCCEEECCCCCHH-HHHHHHHHhC
Confidence 344779999999987 899999999999 7999998876
No 80
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=85.60 E-value=0.24 Score=35.68 Aligned_cols=42 Identities=7% Similarity=0.229 Sum_probs=11.9
Q ss_pred HHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 22 KDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 22 ~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+++++++.+++++++ +|+ .++++++.+.++. ++++.+.+++|
T Consensus 83 e~~~~~I~~v~~~~~-----~m~--~~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 83 EEQVEQVKRVKRAER-----LIV--EDVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp HHHHHHHHHHHTCC------------------------------------
T ss_pred HHHHHHHHhhcchhh-----ccc--cCceEECCCCCHH-HHHHHHHHcCC
Confidence 577899999998865 687 5899999999999 69998887654
No 81
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=85.49 E-value=1 Score=25.95 Aligned_cols=48 Identities=10% Similarity=0.184 Sum_probs=34.7
Q ss_pred CCcCCHHHHHHHHHhhc--CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGALE--MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l~--l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++.. +++....+ ..+.+|+++|.+ .+.+++.+ ++. ++++.+.+++
T Consensus 51 ~Givt~~--dl~~~~~~~~~~~~~v~~~m~~--~~~~v~~~-~l~-~a~~~m~~~~ 100 (141)
T 2rih_A 51 VAVVSER--DILRAVAQRLDLDGPAMPIANS--PITVLDTD-PVH-VAAEKMRRHN 100 (141)
T ss_dssp EEEEEHH--HHHHHHHTTCCTTSBSGGGCBC--CCEEETTS-BHH-HHHHHHHHHT
T ss_pred EEEEEHH--HHHHHHhcCCCCCCCHHHHcCC--CCeEEcCC-CHH-HHHHHHHHcC
Confidence 4667654 44443222 236899999987 68899999 999 6999988775
No 82
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=85.12 E-value=0.26 Score=35.74 Aligned_cols=35 Identities=6% Similarity=-0.039 Sum_probs=29.9
Q ss_pred CCCceeecceeecccEEEeeCC-CCccHHHHHHHHHcCC
Q psy17076 34 MTQKKVEEIMTKLDDCYMLDIE-TILNFTVISEIVRTGE 71 (71)
Q Consensus 34 l~d~~V~eIMtPR~~v~~l~~~-~~l~~~~~~~i~~sgh 71 (71)
|.+.+|+++|++ ++++++.+ +++. ++++.+.++++
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~ 416 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRV 416 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTC
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCC
Confidence 457899999984 78899999 9999 79999988764
No 83
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=85.00 E-value=0.34 Score=28.98 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=27.9
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.+.+|+++|.| +++++.++++. ++++.+.+++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~ 132 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQR 132 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTT
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcC
Confidence 57789999976 78999999999 7999988775
No 84
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=84.60 E-value=0.19 Score=36.61 Aligned_cols=35 Identities=20% Similarity=0.162 Sum_probs=0.0
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.+.+|+++|+|+.++++++.+.++. ++++.+.+++
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~ 179 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENR 179 (490)
T ss_dssp ------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcC
Confidence 4567999999998999999999999 6998887664
No 85
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=84.47 E-value=0.37 Score=27.73 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=29.4
Q ss_pred cCCCceeec---ceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 33 EMTQKKVEE---IMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 33 ~l~d~~V~e---IMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
++-++++++ +|+ .++++++.++++. ++++.+.++++
T Consensus 4 ~~~~~~v~~~~~~~~--~~~~~v~~~~~~~-~a~~~~~~~~~ 42 (144)
T 2nyc_A 4 HFLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRV 42 (144)
T ss_dssp GGGGSBGGGSSCCBC--SSCCCBCTTSBHH-HHHHHHHHHTC
T ss_pred chhhcchhhcCCCCC--CCceEECCCCcHH-HHHHHHHHcCc
Confidence 456788899 665 6799999999999 79999887764
No 86
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=84.15 E-value=0.46 Score=27.20 Aligned_cols=32 Identities=3% Similarity=0.156 Sum_probs=27.3
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.+.+|+++|.| .++++.++++. ++++.+.+++
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~ 98 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQR 98 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTT
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcC
Confidence 57789999966 57899999999 6999988775
No 87
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=84.15 E-value=0.42 Score=30.58 Aligned_cols=33 Identities=18% Similarity=0.096 Sum_probs=28.3
Q ss_pred CceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 36 QKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 36 d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
..+|++||++ ++.+++.++++. ++++.+.++++
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~ 38 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNL 38 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTC
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCC
Confidence 4689999975 588999999999 79999988764
No 88
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=84.14 E-value=0.2 Score=36.42 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=0.0
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.+.+|+++|+|..++++++.+.++. ++++.+.+++
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~ 193 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKK 193 (503)
T ss_dssp ------------------------------------
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcC
Confidence 3567999999999999999999999 6998887664
No 89
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=83.74 E-value=0.24 Score=30.02 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=29.4
Q ss_pred CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 34 MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 34 l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
....+|+++|++ .+++++.++++. ++++.+.++|
T Consensus 102 ~~~~~v~~im~~--~~~tv~~~~~l~-~a~~~m~~~~ 135 (170)
T 4esy_A 102 GRKLTASAVMTQ--PVVTAAPEDSVG-SIADQMRRHG 135 (170)
T ss_dssp HTTCBHHHHCBC--CSCCBCTTSBHH-HHHHHHHHTT
T ss_pred ccccchhhhccc--CcccCCcchhHH-HHHHHHHHcC
Confidence 456799999986 678999999999 7999998876
No 90
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=83.31 E-value=0.61 Score=25.11 Aligned_cols=34 Identities=35% Similarity=0.369 Sum_probs=22.2
Q ss_pred eecccCCCcCCHHHHHHHHHh----hcCCCceeecceeec
Q psy17076 11 MEATSNLVALKKDEVNIISGA----LEMTQKKVEEIMTKL 46 (71)
Q Consensus 11 ~~~~~~~g~i~~~e~~ml~~~----l~l~d~~V~eIMtPR 46 (71)
++.+.--|.+++ ++++..+ .++.+.+|++||+|-
T Consensus 29 ~d~~~lvGIvT~--~Di~~~~~~~~~~~~~~~V~~iMt~~ 66 (70)
T 3ghd_A 29 MEGDEILGVVTE--RDILDKVVAKGKNPKEVKVEEIMTKN 66 (70)
T ss_dssp EETTEEEEEEEH--HHHHHHTTTTTCCGGGCBGGGTCEEC
T ss_pred EECCEEEEEEEH--HHHHHHHHhcCCCcccCCHHHhcCCC
Confidence 333334466764 5565544 456788999999985
No 91
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=81.26 E-value=0.3 Score=31.37 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=16.3
Q ss_pred eeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 38 KVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 38 ~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+|+++|+ .++++++.++++. ++++.+.++++
T Consensus 2 ~v~~im~--~~~~~v~~~~~~~-~a~~~~~~~~~ 32 (282)
T 2yzq_A 2 RVKTIMT--QNPVTITLPATRN-YALELFKKYKV 32 (282)
T ss_dssp BHHHHSE--ESCCCEESSCC-------------C
T ss_pred chHHhcc--CCCeEECCCCcHH-HHHHHHHHcCC
Confidence 6889999 4788899999999 69998887664
No 92
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=80.49 E-value=0.6 Score=29.90 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=29.0
Q ss_pred cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 33 EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 33 ~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
...+.+|+++|++ ++++++.++++. ++++.+.+.+
T Consensus 217 ~~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~ 251 (282)
T 2yzq_A 217 QLPNKPVAEIMTR--DVIVATPHMTVH-EVALKMAKYS 251 (282)
T ss_dssp --CCCBGGGTCBS--SCCCBCTTSBHH-HHHHHHHHHT
T ss_pred hhccCCHHHhcCC--CCceeCCCCCHH-HHHHHHHHcC
Confidence 3467899999986 789999999999 6999988765
No 93
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=80.08 E-value=0.21 Score=36.45 Aligned_cols=35 Identities=14% Similarity=0.101 Sum_probs=24.3
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.+..|+++|+|+.++++++.+.++. ++++.+.+++
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~ 181 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKAR 181 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcC
Confidence 5678999999999999999999999 6887766543
No 94
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=79.15 E-value=1.1 Score=25.87 Aligned_cols=48 Identities=17% Similarity=0.168 Sum_probs=34.4
Q ss_pred CCcCCHHHHHHHHHhhc---CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGALE---MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l~---l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++. ++++....+ +...+|+++|. ++.+++.++++. ++++.+.+++
T Consensus 49 vGivt~--~dl~~~~~~~~~~~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~ 99 (130)
T 3hf7_A 49 ISMLRV--REAYRLMTEKKEFTKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNK 99 (130)
T ss_dssp EEEEEH--HHHHHHHTSSSCCCHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHC
T ss_pred EEEEEH--HHHHHHHhccCccchhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcC
Confidence 466654 455554443 34578999994 468899999999 7999988765
No 95
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=79.08 E-value=0.71 Score=27.55 Aligned_cols=36 Identities=19% Similarity=0.106 Sum_probs=29.5
Q ss_pred cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 33 EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 33 ~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
...+.+|+++|+|. +.+++.++++. ++++.+.++++
T Consensus 94 ~~~~~~v~~~m~~~--~~~v~~~~~l~-~a~~~m~~~~~ 129 (180)
T 3sl7_A 94 KTYGKVVGDLMTPS--PLVVRDSTNLE-DAARLLLETKF 129 (180)
T ss_dssp TTTTCBHHHHSEES--CCCEETTSBHH-HHHHHHTTSTT
T ss_pred ccccccHHHHhCCC--ceEeCCCCcHH-HHHHHHHHcCC
Confidence 45678999999964 57899999999 69999887763
No 96
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=78.89 E-value=0.29 Score=28.92 Aligned_cols=49 Identities=12% Similarity=0.279 Sum_probs=34.9
Q ss_pred CCcCCHHHHHHHHHhhc-------CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGALE-------MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l~-------l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++.. +++..... +.+.+|+++|++ ++.+++.++++. ++++.+.+++
T Consensus 61 ~Giit~~--dl~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~ 116 (156)
T 3ctu_A 61 VGTIGLR--DIMAYQMEHDLSQEIMADTDIVHMTKT--DVAVVSPDFTIT-EVLHKLVDES 116 (156)
T ss_dssp EEEEEHH--HHHHHHHHHTCCHHHHTTSBGGGGCBC--SCCCBCSSCCHH-HHHHHTTTSS
T ss_pred EEEEcHH--HHHHHHHhccccccccccCcHHHhccC--CceeeCCCCcHH-HHHHHHHHcC
Confidence 4666654 44443332 237899999985 678899999999 6998877654
No 97
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=78.48 E-value=0.42 Score=34.31 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=0.0
Q ss_pred CceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 36 QKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 36 d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
+.+|+++|+|+.++.+++.+.++. ++++.+.+++
T Consensus 154 ~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~ 187 (494)
T 1vrd_A 154 SKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHR 187 (494)
T ss_dssp -----------------------------------
T ss_pred CCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcC
Confidence 457999999988999999999999 6988887765
No 98
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=78.09 E-value=0.98 Score=32.78 Aligned_cols=41 Identities=7% Similarity=0.119 Sum_probs=9.5
Q ss_pred HHHHHHHHHhhcCCCceeecc-eeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 22 KDEVNIISGALEMTQKKVEEI-MTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 22 ~~e~~ml~~~l~l~d~~V~eI-MtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+++..++.++..+ ++ |+| ++++++.++++. ++++.+.+++|
T Consensus 87 e~~~~~v~~V~~~------e~gM~~--~~~~v~~~~tv~-eal~~m~~~~~ 128 (503)
T 1me8_A 87 ESQAAMVHAVKNF------KAGFVV--SDSNVKPDQTFA-DVLAISQRTTH 128 (503)
T ss_dssp HHHHHHHHHHHTT------TC------------------------------
T ss_pred HHHHHHHhhhhhc------ccCccc--CCeEECCCCcHH-HHHHHHHHcCc
Confidence 4567777776653 55 998 899999999999 79999887764
No 99
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=76.93 E-value=0.77 Score=33.55 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=30.6
Q ss_pred CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 34 MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 34 l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
-.+.+|+++|+| .++++++.+.++. ++++.+.+++
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~ 206 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYK 206 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHT
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcC
Confidence 357889999998 8899999999999 7999988765
No 100
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=75.74 E-value=0.92 Score=28.85 Aligned_cols=32 Identities=9% Similarity=0.057 Sum_probs=24.8
Q ss_pred eeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 38 KVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 38 ~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+|+++|.++ ++++++.++++. ++++.+.++++
T Consensus 4 ~v~~~i~~~-~~~~v~~~~sl~-~a~~~m~~~~~ 35 (280)
T 3kh5_A 4 RVMKIAQNK-KIVTVYPTTTIR-KALMTMNENKY 35 (280)
T ss_dssp BGGGTSCCS-CCCCBCTTSBHH-HHHHHHHHHCC
T ss_pred hHHHHhcCC-CcEEECCCCcHH-HHHHHHHhCCC
Confidence 344544333 899999999999 79999998774
No 101
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=73.60 E-value=1.5 Score=27.82 Aligned_cols=45 Identities=13% Similarity=0.215 Sum_probs=33.6
Q ss_pred CcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 18 VALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 18 g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
|.++. ++++.. ..+.+|+++|++ ++++++.+.++. ++++.+.+++
T Consensus 102 Givt~--~dll~~---~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~ 146 (205)
T 3kxr_A 102 GTVRR--YDIFKH---EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSR 146 (205)
T ss_dssp EEEEH--HHHTTS---CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSS
T ss_pred EEEEH--HHHHhC---CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcC
Confidence 55553 344432 357889999985 578999999999 6999988765
No 102
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=72.40 E-value=0.74 Score=33.27 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=22.2
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.+.+|+++|+|+.++.+++.+.++. ++++.+.+++
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~ 205 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSK 205 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHT
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcC
Confidence 4578999999988999999999999 6998888765
No 103
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=71.80 E-value=0.85 Score=33.12 Aligned_cols=42 Identities=14% Similarity=0.105 Sum_probs=10.7
Q ss_pred HHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 22 KDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 22 ~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
+++.+++..+ ++++++|+ .+.++++.++++. ++++.+.+++|
T Consensus 78 e~~a~~v~~v-----k~~~~~m~--~~~v~v~~~~tv~-ea~~~m~~~~~ 119 (490)
T 4avf_A 78 EQQAAEVRKV-----KKHETAIV--RDPVTVTPSTKII-ELLQMAREYGF 119 (490)
T ss_dssp HHHHHHHHHH-----HHCCC------------------------------
T ss_pred HHHHHHhhhh-----cccccCcc--cCceEeCCCCcHH-HHHHHHHHhCC
Confidence 5567778877 45788998 4788999999999 79999887764
No 104
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=70.33 E-value=0.22 Score=36.43 Aligned_cols=32 Identities=13% Similarity=0.152 Sum_probs=25.6
Q ss_pred eecceee----cccEEEeeCCCCccHHHHHHHHHcCC
Q psy17076 39 VEEIMTK----LDDCYMLDIETILNFTVISEIVRTGE 71 (71)
Q Consensus 39 V~eIMtP----R~~v~~l~~~~~l~~~~~~~i~~sgh 71 (71)
|++||++ +.++++++.+.++. ++++.+.+++|
T Consensus 109 V~~V~~~~~~m~~d~v~l~~~~tv~-ea~~~m~~~~~ 144 (511)
T 3usb_A 109 VDKVKRSESGVISDPFFLTPEHQVY-DAEHLMGKYRI 144 (511)
T ss_dssp HHHHHTSSSCSSSSCCCBCTTSBHH-HHHHHHHHHCC
T ss_pred HHHhhccccccccCCEEECCCCCHH-HHHHHHHHcCC
Confidence 5555555 45789999999999 79999998875
No 105
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=67.61 E-value=2.1 Score=28.09 Aligned_cols=46 Identities=17% Similarity=0.164 Sum_probs=34.3
Q ss_pred CCcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++.. +++.. ..+.+|+++|.+ ++.+++.++++. ++++.+.+++
T Consensus 184 vGivt~~--dll~~---~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~ 229 (278)
T 2yvy_A 184 KGVLSLR--DLIVA---DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYD 229 (278)
T ss_dssp EEEEEHH--HHHHS---CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHT
T ss_pred EEEEEHH--HHhcC---CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcC
Confidence 3556543 44432 367899999975 588999999999 7999988765
No 106
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=64.78 E-value=1.9 Score=28.42 Aligned_cols=51 Identities=14% Similarity=0.098 Sum_probs=37.2
Q ss_pred CCcCCHHHHHHHHHhh----cCCCceeecceeec----ccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGAL----EMTQKKVEEIMTKL----DDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l----~l~d~~V~eIMtPR----~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.++.. +++.... ...+.+|+++|+++ .++.+++.++++. ++++.+.+++
T Consensus 229 ~Giit~~--dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~ 287 (334)
T 2qrd_G 229 LNVYESV--DVMHLIQDGDYSNLDLSVGEALLKRPANFDGVHTCRATDRLD-GIFDAIKHSR 287 (334)
T ss_dssp EEEEETH--HHHHHHTTSCGGGGGSBHHHHHTTCCTTCCCCCEECTTCBHH-HHHHHHHHSC
T ss_pred EEEEEHH--HHHHHhhccccccccCcHHHHHhcccccCCCCEEECCCCcHH-HHHHHHHHcC
Confidence 3566553 4444322 23467899999976 5789999999999 7999998876
No 107
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=61.81 E-value=3.1 Score=29.84 Aligned_cols=45 Identities=18% Similarity=0.183 Sum_probs=34.5
Q ss_pred CcCCHHHHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 18 VALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 18 g~i~~~e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
|.++.. +++.. -.+.+|+++|++ ++.+++.++++. ++.+.+.+++
T Consensus 205 GiVt~~--Dll~~---~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~ 249 (473)
T 2zy9_A 205 GVLSLR--DLIVA---DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYD 249 (473)
T ss_dssp EEEEHH--HHHHS---CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHT
T ss_pred EEEEHH--HHhcC---CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcC
Confidence 555543 44432 367899999985 689999999999 7999988765
No 108
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=59.88 E-value=6.1 Score=28.49 Aligned_cols=49 Identities=12% Similarity=0.165 Sum_probs=34.9
Q ss_pred CCcCCHHHHHHHHHhh---cCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 17 LVALKKDEVNIISGAL---EMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l---~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.|.|+.. +++..++ ...+.+|+++|++ ++.+++.++++. ++++.+.+++
T Consensus 430 vGiVt~~--Dll~~l~~~~~~~~~~V~~im~~--~~~~v~~~~~l~-~a~~~m~~~~ 481 (527)
T 3pc3_A 430 LGVVGQE--TLITQIVSMNRQQSDPAIKALNK--RVIRLNESEILG-KLARVLEVDP 481 (527)
T ss_dssp EEEEEHH--HHHHHHHHHCCCTTSBGGGGEET--TCCEEETTSBHH-HHHHHHTTCS
T ss_pred EEEEEHH--HHHHHHHhccCcCCCcHHHHhcC--CCeEECCCCcHH-HHHHHHhhCC
Confidence 4666553 4544433 3457899999985 778999999999 6988875543
No 109
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=58.05 E-value=3 Score=27.61 Aligned_cols=34 Identities=9% Similarity=0.104 Sum_probs=28.9
Q ss_pred CCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 34 MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 34 l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
..+.+|+++|.+ ++.+++.++++. ++++.+.+++
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~ 231 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYD 231 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHT
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcC
Confidence 357899999986 578999999999 7999988765
No 110
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=57.10 E-value=2.2 Score=32.10 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=0.0
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHc
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRT 69 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~s 69 (71)
.+..|++|||| ++++.+.+.+++ ++.+.+.++
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~ 229 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRET 229 (556)
T ss_dssp -----------------------------------
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHc
Confidence 45789999997 599999999999 688777654
No 111
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=53.65 E-value=6 Score=28.24 Aligned_cols=39 Identities=10% Similarity=0.048 Sum_probs=6.2
Q ss_pred HHHHHHHhhcCCCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 24 EVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 24 e~~ml~~~l~l~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.+..+..++. ++++|+| ++++++.++++. ++++.+.+++
T Consensus 87 ~~~~v~~v~~-----~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~ 125 (494)
T 1vrd_A 87 QARQVSIVKK-----TENGIIY--DPITVTPDMTVK-EAIDLMAEYK 125 (494)
T ss_dssp HHHHHHHHHT-----C-------------------------------
T ss_pred HHHHHHhhhh-----HhhcCcc--CCeEECCCCCHH-HHHHHHHHcC
Confidence 3555666654 5778986 789999999999 6998887765
No 112
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=53.61 E-value=6 Score=28.13 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=28.9
Q ss_pred CCceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 35 TQKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 35 ~d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.+.+|+++|+| .++++++.+.++. ++++.+.+++
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~ 183 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHR 183 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTT
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcC
Confidence 57789999996 3688999999999 6999998875
No 113
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=51.10 E-value=8.7 Score=19.18 Aligned_cols=29 Identities=34% Similarity=0.392 Sum_probs=19.3
Q ss_pred CCcCCHHHHHHHHHhhc----CCCceeecceeecc
Q psy17076 17 LVALKKDEVNIISGALE----MTQKKVEEIMTKLD 47 (71)
Q Consensus 17 ~g~i~~~e~~ml~~~l~----l~d~~V~eIMtPR~ 47 (71)
.|.++. ++++...+. ..+.+|+++|+|..
T Consensus 35 ~Givt~--~dl~~~~~~~~~~~~~~~v~~im~~~~ 67 (70)
T 3fio_A 35 LGVVTE--RDILDKVVAKGKNPKEVKVEEIMTKNP 67 (70)
T ss_dssp EEEEEH--HHHHHHTTTTTCCGGGCBGGGTCEECT
T ss_pred EEEEEH--HHHHHHHHHcCCCcccCCHHHhcCCCC
Confidence 466665 456655443 45788999999853
No 114
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=42.39 E-value=5.3 Score=28.66 Aligned_cols=42 Identities=17% Similarity=0.274 Sum_probs=0.0
Q ss_pred HHHHHhhcCC------CceeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 26 NIISGALEMT------QKKVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 26 ~ml~~~l~l~------d~~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
.-+.|++..+ +.+|+++|+| ++.+++.+.++. ++++.+.+++
T Consensus 133 ~~lvGivt~~Dl~~~~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~ 180 (486)
T 2cu0_A 133 EKVVGIITKKDIAAREGKLVKELMTK--EVITVPESIEVE-EALKIMIENR 180 (486)
T ss_dssp ---------------------------------------------------
T ss_pred CEEEEEEEHHHhccCCCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcC
Confidence 3345555554 4579999986 688999999999 6888887654
No 115
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=41.96 E-value=16 Score=27.09 Aligned_cols=30 Identities=3% Similarity=-0.173 Sum_probs=24.4
Q ss_pred eeecceeecccEEEeeCCCCccHHHHHHHHHcC
Q psy17076 38 KVEEIMTKLDDCYMLDIETILNFTVISEIVRTG 70 (71)
Q Consensus 38 ~V~eIMtPR~~v~~l~~~~~l~~~~~~~i~~sg 70 (71)
+|+++|++. ..+++.++++. ++.+.+.+++
T Consensus 569 ~v~~iMt~~--pitV~~~~~l~-ea~~~M~~~~ 598 (632)
T 3org_A 569 SLVVPCDVS--PIVVTSYSLVR-QLHFLFVMLM 598 (632)
T ss_dssp --CCSCCCC--CCEEETTCBHH-HHHHHHHHTC
T ss_pred ccchhhcCC--CceecCCCcHH-HHHHHHHhcC
Confidence 489999875 56899999999 7999998876
No 116
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=30.55 E-value=21 Score=21.54 Aligned_cols=23 Identities=35% Similarity=0.499 Sum_probs=17.4
Q ss_pred cCCCceeecceeecccEEEeeCCCC
Q psy17076 33 EMTQKKVEEIMTKLDDCYMLDIETI 57 (71)
Q Consensus 33 ~l~d~~V~eIMtPR~~v~~l~~~~~ 57 (71)
+|.|-+ +++.+|.+|++++.+.|
T Consensus 96 ~feDgs--~~~~kR~~iyt~~E~lP 118 (118)
T 2qqr_A 96 EFEDGS--QLVVKRDDVYTLDEELP 118 (118)
T ss_dssp EETTSC--EEEECGGGEEETTSCCC
T ss_pred EECCCC--EEEEcHHHeeccccCCc
Confidence 445554 68999999999987654
No 117
>2ou3_A Tellurite resistance protein of COG3793; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE I3A; 1.85A {Nostoc punctiforme} SCOP: a.287.1.1
Probab=28.45 E-value=21 Score=21.64 Aligned_cols=26 Identities=12% Similarity=0.066 Sum_probs=21.1
Q ss_pred ccceeeecccCCCcCCHHHHHHHHHhhc
Q psy17076 6 KTGIPMEATSNLVALKKDEVNIISGALE 33 (71)
Q Consensus 6 ~~l~~~~~~~~~g~i~~~e~~ml~~~l~ 33 (71)
.+|+ +.+...|.++++|.+.+.+.++
T Consensus 34 ~all--~vAkADG~v~~~E~~~i~~~~~ 59 (161)
T 2ou3_A 34 KSVL--TCAKADGVISPEEKDWALGFCA 59 (161)
T ss_dssp HHHH--HHHHSSSCCCHHHHHHHHHHHH
T ss_pred HHHH--HHHhhcCCCCHHHHHHHHHHHH
Confidence 4554 6677789999999999999886
Done!