BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17078
(68 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0GA42|CNNM1_MOUSE Metal transporter CNNM1 OS=Mus musculus GN=Cnnm1 PE=1 SV=5
Length = 951
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
L K+E+NII GALE+ K VEE++T L DC+ML + +L+F +SEI+
Sbjct: 410 LVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEIL 457
>sp|Q9NRU3|CNNM1_HUMAN Metal transporter CNNM1 OS=Homo sapiens GN=CNNM1 PE=2 SV=3
Length = 951
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
L K+E+NII GALE+ K VEE++T L DC+ML + +L+F +SEI+
Sbjct: 410 LVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEIL 457
>sp|Q9H8M5|CNNM2_HUMAN Metal transporter CNNM2 OS=Homo sapiens GN=CNNM2 PE=1 SV=2
Length = 875
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
L K+E+NII GALE+ K VE++MT L DC+M+ E IL+F +SEI+
Sbjct: 427 LVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIM 474
>sp|Q3TWN3|CNNM2_MOUSE Metal transporter CNNM2 OS=Mus musculus GN=Cnnm2 PE=1 SV=3
Length = 875
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
L K+E+NII GALE+ K VE++MT L DC+M+ E IL+F +SEI+
Sbjct: 427 LVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIM 474
>sp|Q5U2P1|CNNM2_RAT Metal transporter CNNM2 OS=Rattus norvegicus GN=Cnnm2 PE=2 SV=1
Length = 875
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
L K+E+NII GALE+ K VE++MT L DC+M+ E IL+F +SEI+
Sbjct: 427 LVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIM 474
>sp|Q6P4Q7|CNNM4_HUMAN Metal transporter CNNM4 OS=Homo sapiens GN=CNNM4 PE=1 SV=3
Length = 775
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
L K+E+N+I GALE+ K VE+IMT+L DC+M+ + IL+F +SEI+
Sbjct: 354 LVKEELNMIQGALELRTKTVEDIMTQLQDCFMIRSDAILDFNTMSEIM 401
>sp|A0JPA0|CNNM4_XENTR Metal transporter CNNM4 OS=Xenopus tropicalis GN=cnnm4 PE=2 SV=1
Length = 769
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 40/57 (70%)
Query: 11 MEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
++ T + ++E+NII GALE+ K VE++MTK++DC+ML + +L+F +S I+
Sbjct: 342 LKVTEPYSGIVREEMNIIQGALELRTKTVEDVMTKVEDCFMLPSDAVLDFNTMSSIM 398
>sp|P0C588|CNNM4_RAT Metal transporter CNNM4 OS=Rattus norvegicus GN=Cnnm4 PE=1 SV=1
Length = 772
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
L K+E+N+I GALE+ K VE+IMT+L DC+M+ + IL+F +SEI+
Sbjct: 352 LVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIM 399
>sp|Q69ZF7|CNNM4_MOUSE Metal transporter CNNM4 OS=Mus musculus GN=Cnnm4 PE=1 SV=2
Length = 771
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
L K+E+N+I GALE+ K VE+IMT+L DC+M+ + IL+F +SEI+
Sbjct: 351 LVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIM 398
>sp|Q12296|MAM3_YEAST Protein MAM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=MAM3 PE=1 SV=1
Length = 706
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 2 KKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFT 61
K KT + + T + L KDEV IIS L++ K+VEEIMT +++ + + +TIL+
Sbjct: 218 KSGLKTLVTLHRTMGVERLTKDEVTIISAVLDLKAKRVEEIMTPIENVFTMSADTILDDK 277
Query: 62 VISEIVN 68
+ +I N
Sbjct: 278 TVEKIFN 284
>sp|Q9USJ3|YJ23_SCHPO Uncharacterized protein C4B3.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC4B3.03c PE=1 SV=1
Length = 679
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 2 KKKFKTGIPMEATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFT 61
K KT + + + L +DEV II+ L++ +K E IMT ++D + L ++ IL+
Sbjct: 219 KSGLKTLVTLHRDLGIDKLNQDEVTIITAVLDLREKHAESIMTPIEDVFTLPMDRILDED 278
Query: 62 VISEIV 67
+I EI+
Sbjct: 279 LIGEII 284
>sp|Q9ZVS8|Y1327_ARATH Putative DUF21 domain-containing protein At1g03270 OS=Arabidopsis
thaliana GN=CBSDUF4 PE=4 SV=2
Length = 499
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN 68
L +E IISGAL+++QK EE MT ++ + LD+ T L++ I +I++
Sbjct: 207 LTHEETMIISGALDLSQKTAEEAMTPIESTFSLDVNTKLDWETIGKILS 255
>sp|Q67XQ0|Y4424_ARATH DUF21 domain-containing protein At4g14240 OS=Arabidopsis thaliana
GN=CBSDUF1 PE=2 SV=1
Length = 494
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
L DE IISGAL++T+K +E MT ++ + LD+ + L++ + +I+
Sbjct: 209 LTHDETTIISGALDLTEKTAQEAMTPIESTFSLDVNSKLDWEAMGKIL 256
>sp|Q8RY60|Y1733_ARATH DUF21 domain-containing protein At1g47330 OS=Arabidopsis thaliana
GN=CBSDUF7 PE=1 SV=1
Length = 527
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN 68
L DE +II+GALE+T+K ++ MT + + + L+++T LN ++ I++
Sbjct: 187 LTTDETSIITGALELTEKTAKDAMTPISNAFSLELDTPLNLETLNTIMS 235
>sp|Q4V3C7|Y4423_ARATH DUF21 domain-containing protein At4g14230 OS=Arabidopsis thaliana
GN=CBSDUF2 PE=2 SV=1
Length = 495
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 12 EATSNLVALKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEI 66
EA L DE IISGAL++T+K +E MT ++ + LD+ + L+ + +I
Sbjct: 200 EAAGKGGELTHDETTIISGALDLTEKTAQEAMTPIESTFSLDVNSKLDREAMDKI 254
>sp|Q32NY4|CNNM3_MOUSE Metal transporter CNNM3 OS=Mus musculus GN=Cnnm3 PE=1 SV=2
Length = 713
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 27/34 (79%)
Query: 34 MTQKKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
+ + VE+++T L+DC+MLD T+L+F+V++ I+
Sbjct: 315 LRSRTVEDVLTPLEDCFMLDSGTVLDFSVLASIM 348
>sp|Q8NE01|CNNM3_HUMAN Metal transporter CNNM3 OS=Homo sapiens GN=CNNM3 PE=1 SV=1
Length = 707
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 25/31 (80%)
Query: 37 KKVEEIMTKLDDCYMLDIETILNFTVISEIV 67
+ VE+++T L+DC+MLD T+L+F V++ I+
Sbjct: 312 RTVEDVLTPLEDCFMLDASTVLDFGVLASIM 342
>sp|Q8VZI2|Y4370_ARATH DUF21 domain-containing protein At4g33700 OS=Arabidopsis thaliana
GN=CBSDUF6 PE=1 SV=1
Length = 424
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILN 59
L DE II+GALE+++K V++ MT + D +++DI L+
Sbjct: 187 LTHDETTIIAGALELSEKMVKDAMTPISDIFVIDINAKLD 226
>sp|Q9ZQR4|Y2452_ARATH DUF21 domain-containing protein At2g14520 OS=Arabidopsis thaliana
GN=CBSDUF3 PE=2 SV=2
Length = 423
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILNFTVISEIVN 68
L DE II+GALE+++K ++ MT + D +++DI L+ +++ I++
Sbjct: 187 LTHDETTIIAGALELSEKMAKDAMTPISDTFVIDINAKLDRDLMNLILD 235
>sp|Q9LTD8|Y5279_ARATH DUF21 domain-containing protein At5g52790 OS=Arabidopsis thaliana
GN=CBSDUF5 PE=2 SV=2
Length = 500
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 20 LKKDEVNIISGALEMTQKKVEEIMTKLDDCYMLDIETILN 59
L DE IISGAL+M+QK ++ MT + + LDI L+
Sbjct: 188 LTHDETTIISGALDMSQKSAKDAMTPVSQIFSLDINFKLD 227
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.344
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,643,081
Number of Sequences: 539616
Number of extensions: 608016
Number of successful extensions: 2687
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2666
Number of HSP's gapped (non-prelim): 24
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)