Query psy17079
Match_columns 99
No_of_seqs 130 out of 1059
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 21:19:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17079.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17079hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ruv_A Chaperonin, CPN; double 99.5 2.5E-15 8.6E-20 123.8 3.2 60 2-61 466-525 (543)
2 3p9d_G T-complex protein 1 sub 99.5 3.1E-15 1.1E-19 123.5 3.1 57 3-59 475-531 (550)
3 3aq1_B Thermosome subunit; gro 99.5 8.6E-15 2.9E-19 119.5 4.3 59 3-61 424-482 (500)
4 3p9d_H T-complex protein 1 sub 99.5 1.5E-16 5.2E-21 131.8 -6.9 70 3-72 493-565 (568)
5 3iyg_A T-complex protein 1 sub 99.5 3.3E-14 1.1E-18 116.7 5.3 51 5-55 478-528 (529)
6 3rtk_A 60 kDa chaperonin 2; he 99.5 1.8E-14 6.1E-19 119.5 3.5 71 6-78 472-542 (546)
7 3ko1_A Chaperonin; 9-fold symm 99.5 1.4E-14 4.8E-19 119.8 2.6 60 5-64 483-542 (553)
8 3p9d_F T-complex protein 1 sub 99.5 2.5E-14 8.7E-19 117.8 3.8 58 3-60 485-542 (546)
9 3iyg_Z T-complex protein 1 sub 99.4 5.4E-14 1.8E-18 115.3 5.3 52 3-54 465-516 (517)
10 1a6d_B Thermosome (beta subuni 99.4 2.5E-14 8.7E-19 117.7 3.2 61 3-63 471-531 (543)
11 1q3q_A Thermosome alpha subuni 99.4 2.3E-14 7.7E-19 118.3 2.9 55 4-58 474-528 (548)
12 3iyg_B T-complex protein 1 sub 99.4 8.2E-14 2.8E-18 114.0 5.3 54 3-56 459-512 (513)
13 3iyg_H T-complex protein 1 sub 99.4 1E-13 3.5E-18 113.6 5.3 53 3-55 462-514 (515)
14 1a6d_A Thermosome (alpha subun 99.4 4.8E-14 1.6E-18 116.3 3.0 56 3-58 470-525 (545)
15 3iyg_D T-complex protein 1 sub 99.4 8.4E-14 2.9E-18 114.1 4.1 53 3-55 466-518 (518)
16 3p9d_D T-complex protein 1 sub 99.4 8.9E-14 3.1E-18 114.3 2.7 53 3-55 476-528 (528)
17 1we3_A CPN60(groel); chaperoni 99.4 1.2E-13 4.2E-18 114.1 3.3 62 3-64 473-534 (543)
18 3iyg_G T-complex protein 1 sub 99.4 2.2E-13 7.4E-18 111.6 4.7 52 4-55 463-514 (515)
19 3p9d_E T-complex protein 1 sub 99.4 1.3E-13 4.4E-18 114.2 3.3 56 3-58 506-561 (562)
20 3iyg_Q T-complex protein 1 sub 99.4 2.6E-13 8.9E-18 110.9 4.9 53 3-55 458-512 (512)
21 3iyg_E T-complex protein 1 sub 99.4 2.9E-13 9.8E-18 110.8 5.1 52 3-54 463-514 (515)
22 3p9d_B T-complex protein 1 sub 99.4 9.8E-14 3.3E-18 113.8 1.7 56 3-58 466-521 (527)
23 3p9d_A T-complex protein 1 sub 99.4 2.8E-13 9.6E-18 112.1 4.5 53 6-58 499-551 (559)
24 3p9d_C T-complex protein 1 sub 99.3 3.7E-13 1.2E-17 112.4 3.0 55 3-57 534-588 (590)
25 1iok_A Chaperonin 60; chaperon 99.3 7E-13 2.4E-17 109.7 2.4 56 4-59 474-529 (545)
26 1kp8_A Groel protein; chaperon 99.3 1.1E-12 3.9E-17 108.6 3.1 55 5-59 473-527 (547)
27 2llh_A Nucleophosmin; nucleola 72.7 0.93 3.2E-05 28.8 0.0 18 75-92 57-74 (74)
No 1
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=99.53 E-value=2.5e-15 Score=123.84 Aligned_cols=60 Identities=30% Similarity=0.410 Sum_probs=51.5
Q ss_pred CCCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCCCCC
Q psy17079 2 QSNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAGGEG 61 (99)
Q Consensus 2 ~G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~~~~ 61 (99)
+|+.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.+++.++|+
T Consensus 466 ~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~ 525 (543)
T 3ruv_A 466 NGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRGAP 525 (543)
T ss_dssp TCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC------
T ss_pred cCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCCCC
Confidence 355689999999999999999999999999999999999999999999999998887664
No 2
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=99.52 E-value=3.1e-15 Score=123.53 Aligned_cols=57 Identities=51% Similarity=0.821 Sum_probs=52.5
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAGG 59 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~~ 59 (99)
|+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|++++...
T Consensus 475 ~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~ 531 (550)
T 3p9d_G 475 GEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSES 531 (550)
T ss_dssp SCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC-
T ss_pred CCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCccc
Confidence 456799999999999999999999999999999999999999999999999876653
No 3
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=99.50 E-value=8.6e-15 Score=119.50 Aligned_cols=59 Identities=29% Similarity=0.453 Sum_probs=44.2
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCCCCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAGGEG 61 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~~~~ 61 (99)
|+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.+++.++|+
T Consensus 424 ~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~ 482 (500)
T 3aq1_B 424 GNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSANQG 482 (500)
T ss_dssp TCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred CCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 45679999999999999999999999999999999999999999999999998776654
No 4
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=99.49 E-value=1.5e-16 Score=131.81 Aligned_cols=70 Identities=39% Similarity=0.501 Sum_probs=40.6
Q ss_pred CCceeeeeccCCc---cccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCCCCCCCCCCCCCCCC
Q psy17079 3 SNCWYGVDITKED---ISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAGGEGGQGMPMPGRGR 72 (99)
Q Consensus 3 G~~~~GVdi~~G~---i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~~~~~~~~~~~~~~~ 72 (99)
|+.++|||+.+|. +.||++.|||||+.||+++|++|+|+|++|||||++|+++++++|++|++++|+.|+
T Consensus 493 ~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~~~~~~~~~~ 565 (568)
T 3p9d_H 493 DHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPRAPQGPRPGNWD 565 (568)
T ss_dssp TTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC---------------------------
T ss_pred CCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCCCCCCCCCCCCC
Confidence 4567999999997 999999999999999999999999999999999999999999999876533435666
No 5
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.47 E-value=3.3e-14 Score=116.72 Aligned_cols=51 Identities=37% Similarity=0.599 Sum_probs=49.0
Q ss_pred ceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCC
Q psy17079 5 CWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNP 55 (99)
Q Consensus 5 ~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~ 55 (99)
.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||+||+.+
T Consensus 478 ~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (529)
T 3iyg_A 478 KWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLH 528 (529)
T ss_pred ceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Confidence 579999999999999999999999999999999999999999999999874
No 6
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=99.46 E-value=1.8e-14 Score=119.49 Aligned_cols=71 Identities=17% Similarity=0.180 Sum_probs=43.0
Q ss_pred eeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCCCCCCCCCCCCCCCCCCcccC
Q psy17079 6 WYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAGGEGGQGMPMPGRGRGRPIVD 78 (99)
Q Consensus 6 ~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~~~~~~~~~~~~~~~~~~~~~ 78 (99)
.+|+|+.+|++.||++.|||||+.||+++|++|+|+|++||+||++|+++|.+.|+++++ . ++..|++|..
T Consensus 472 ~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~~~~~-~-~~~~~~~~~~ 542 (546)
T 3rtk_A 472 GHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEKASVPG-G-GDMGGMDFHH 542 (546)
T ss_dssp TEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC-----------------------------
T ss_pred CEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCC-C-CCcCcccccc
Confidence 389999999999999999999999999999999999999999999999988776654332 3 5566666654
No 7
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=99.46 E-value=1.4e-14 Score=119.83 Aligned_cols=60 Identities=42% Similarity=0.621 Sum_probs=48.9
Q ss_pred ceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCCCCCCCC
Q psy17079 5 CWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAGGEGGQG 64 (99)
Q Consensus 5 ~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~~~~~~~ 64 (99)
.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.+++.++|+.+.
T Consensus 483 ~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~~ 542 (553)
T 3ko1_A 483 KWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGGESKT 542 (553)
T ss_dssp TTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC----------
T ss_pred ceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccCCCCC
Confidence 579999999999999999999999999999999999999999999999998887775443
No 8
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=99.45 E-value=2.5e-14 Score=117.81 Aligned_cols=58 Identities=28% Similarity=0.386 Sum_probs=53.4
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCCCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAGGE 60 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~~~ 60 (99)
++.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||+||+++++++.
T Consensus 485 ~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~~ 542 (546)
T 3p9d_F 485 ETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTLK 542 (546)
T ss_dssp TSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSCC
T ss_pred CCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence 3457899999999999999999999999999999999999999999999998876544
No 9
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.45 E-value=5.4e-14 Score=115.33 Aligned_cols=52 Identities=27% Similarity=0.393 Sum_probs=49.6
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKN 54 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a 54 (99)
|+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||+||++
T Consensus 465 ~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 465 SGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred CCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 4567999999999999999999999999999999999999999999999976
No 10
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=99.44 E-value=2.5e-14 Score=117.74 Aligned_cols=61 Identities=31% Similarity=0.492 Sum_probs=49.1
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCCCCCCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAGGEGGQ 63 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~~~~~~ 63 (99)
|+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.+++.++|+++
T Consensus 471 ~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~ 531 (543)
T 1a6d_B 471 GNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSSSSNP 531 (543)
T ss_dssp TCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC----------
T ss_pred CCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCC
Confidence 4567999999999999999999999999999999999999999999999999877666544
No 11
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=99.44 E-value=2.3e-14 Score=118.26 Aligned_cols=55 Identities=35% Similarity=0.466 Sum_probs=50.6
Q ss_pred CceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCC
Q psy17079 4 NCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAG 58 (99)
Q Consensus 4 ~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~ 58 (99)
+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..++.+
T Consensus 474 ~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~ 528 (548)
T 1q3q_A 474 GLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATK 528 (548)
T ss_dssp CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC--
T ss_pred CCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 4579999999999999999999999999999999999999999999999987654
No 12
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=99.43 E-value=8.2e-14 Score=114.05 Aligned_cols=54 Identities=30% Similarity=0.343 Sum_probs=51.2
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPK 56 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~ 56 (99)
|+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|+++|
T Consensus 459 ~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~ 512 (513)
T 3iyg_B 459 GKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAP 512 (513)
T ss_pred CCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 556799999999999999999999999999999999999999999999999865
No 13
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.42 E-value=1e-13 Score=113.62 Aligned_cols=53 Identities=72% Similarity=1.185 Sum_probs=50.1
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNP 55 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~ 55 (99)
|+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||+||+++
T Consensus 462 ~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 462 GGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred cCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45678999999999999999999999999999999999999999999999865
No 14
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=99.42 E-value=4.8e-14 Score=116.27 Aligned_cols=56 Identities=29% Similarity=0.436 Sum_probs=48.1
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAG 58 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~ 58 (99)
|+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++||+||++|..++.+
T Consensus 470 ~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 470 GRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp TCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred CCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 45679999999999999999999999999999999999999999999999987655
No 15
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.41 E-value=8.4e-14 Score=114.10 Aligned_cols=53 Identities=26% Similarity=0.423 Sum_probs=50.1
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNP 55 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~ 55 (99)
|+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||+||+++
T Consensus 466 ~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 466 GEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred cCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 55679999999999999999999999999999999999999999999999864
No 16
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=99.39 E-value=8.9e-14 Score=114.27 Aligned_cols=53 Identities=23% Similarity=0.371 Sum_probs=50.1
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNP 55 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~ 55 (99)
|+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||+||+++
T Consensus 476 ~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 476 GELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp SSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred cCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 55679999999999999999999999999999999999999999999999864
No 17
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=99.38 E-value=1.2e-13 Score=114.08 Aligned_cols=62 Identities=21% Similarity=0.379 Sum_probs=52.5
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCCCCCCCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAGGEGGQG 64 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~~~~~~~ 64 (99)
++.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++||+||++|..+|.+.+++|+
T Consensus 473 ~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~ 534 (543)
T 1we3_A 473 KNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKESTPA 534 (543)
T ss_dssp SCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC------
T ss_pred CCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCC
Confidence 34578999999999999999999999999999999999999999999999987766554443
No 18
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.38 E-value=2.2e-13 Score=111.57 Aligned_cols=52 Identities=29% Similarity=0.433 Sum_probs=48.9
Q ss_pred CceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCC
Q psy17079 4 NCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNP 55 (99)
Q Consensus 4 ~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~ 55 (99)
+.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||+||...
T Consensus 463 ~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 463 CETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred CCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 3478999999999999999999999999999999999999999999999753
No 19
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=99.38 E-value=1.3e-13 Score=114.18 Aligned_cols=56 Identities=29% Similarity=0.271 Sum_probs=51.1
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAG 58 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~ 58 (99)
++.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||+||++++++
T Consensus 506 ~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~ 561 (562)
T 3p9d_E 506 KISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKDE 561 (562)
T ss_dssp TTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC--
T ss_pred CCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 44679999999999999999999999999999999999999999999999987653
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.38 E-value=2.6e-13 Score=110.94 Aligned_cols=53 Identities=36% Similarity=0.377 Sum_probs=49.4
Q ss_pred CCceeeeeccCC--ccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCC
Q psy17079 3 SNCWYGVDITKE--DISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNP 55 (99)
Q Consensus 3 G~~~~GVdi~~G--~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~ 55 (99)
|+.++|+|+.+| ++.||++.|||||+.||+++|++|+|+|++|||||+||+++
T Consensus 458 ~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 458 GNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMAK 512 (512)
T ss_pred CCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheecC
Confidence 566899999965 99999999999999999999999999999999999999864
No 21
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.38 E-value=2.9e-13 Score=110.75 Aligned_cols=52 Identities=27% Similarity=0.318 Sum_probs=49.4
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKN 54 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a 54 (99)
++.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||+||++
T Consensus 463 ~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 463 VNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred CCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 4567999999999999999999999999999999999999999999999976
No 22
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=99.37 E-value=9.8e-14 Score=113.78 Aligned_cols=56 Identities=27% Similarity=0.327 Sum_probs=50.5
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAG 58 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~ 58 (99)
|+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.++|..
T Consensus 466 ~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 521 (527)
T 3p9d_B 466 GISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRT 521 (527)
T ss_dssp TCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC---
T ss_pred CCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcc
Confidence 45679999999999999999999999999999999999999999999999987553
No 23
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=99.37 E-value=2.8e-13 Score=112.07 Aligned_cols=53 Identities=30% Similarity=0.479 Sum_probs=50.1
Q ss_pred eeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCC
Q psy17079 6 WYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAG 58 (99)
Q Consensus 6 ~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~ 58 (99)
++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|++.|..
T Consensus 499 ~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 551 (559)
T 3p9d_A 499 NYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEP 551 (559)
T ss_dssp CEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCC
T ss_pred ceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCcc
Confidence 68999999999999999999999999999999999999999999999986543
No 24
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=99.33 E-value=3.7e-13 Score=112.44 Aligned_cols=55 Identities=33% Similarity=0.621 Sum_probs=51.1
Q ss_pred CCceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCC
Q psy17079 3 SNCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKA 57 (99)
Q Consensus 3 G~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~ 57 (99)
|+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|.+++.
T Consensus 534 ~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 534 GNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp SCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred CCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 5567999999999999999999999999999999999999999999999987653
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=99.29 E-value=7e-13 Score=109.71 Aligned_cols=56 Identities=21% Similarity=0.326 Sum_probs=50.4
Q ss_pred CceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCCC
Q psy17079 4 NCWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAGG 59 (99)
Q Consensus 4 ~~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~~ 59 (99)
+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++||+||++|..++...
T Consensus 474 ~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 529 (545)
T 1iok_A 474 DKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPK 529 (545)
T ss_dssp STTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC---
T ss_pred CCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccC
Confidence 34789999999999999999999999999999999999999999999999876543
No 26
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=99.28 E-value=1.1e-12 Score=108.58 Aligned_cols=55 Identities=16% Similarity=0.333 Sum_probs=50.7
Q ss_pred ceeeeeccCCccccccccCcccchHhHHHHHHHHHHHHHHHhchhhHhhCCCCCC
Q psy17079 5 CWYGVDITKEDISDNMESCVWEPAIVKKNAITAASEAACLVLSVDETIKNPKAGG 59 (99)
Q Consensus 5 ~~~GVdi~~G~i~Dm~e~GV~Ep~~VK~~~ik~A~EaA~~ILrID~iI~a~~~~~ 59 (99)
.++|+|+.+|++.||++.|||||+.||+++|++|+|+|++||+||++|..+|...
T Consensus 473 ~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 473 GNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKND 527 (547)
T ss_dssp TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC--
T ss_pred CCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccC
Confidence 4689999999999999999999999999999999999999999999999876544
No 27
>2llh_A Nucleophosmin; nucleolar, chaperone, oncoprotein, DNA binding protein; NMR {Homo sapiens} PDB: 2vxd_A
Probab=72.69 E-value=0.93 Score=28.75 Aligned_cols=18 Identities=22% Similarity=0.626 Sum_probs=15.3
Q ss_pred cccCCCcccchhhhHHHH
Q psy17079 75 PIVDKGTCNCLWSYRAEI 92 (99)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~ 92 (99)
-|.++-.++.+|+||+.|
T Consensus 57 ~mtdqe~IqdLW~Wrqsl 74 (74)
T 2llh_A 57 RMTDQEAIQDLWQWRKSL 74 (74)
Confidence 377888999999999865
Done!