RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy1708
(482 letters)
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 300 bits (771), Expect = 3e-97
Identities = 84/248 (33%), Positives = 132/248 (53%), Gaps = 23/248 (9%)
Query: 13 VILFMIIVFIPMFARFIPLSLFNSRVMEYLVALSKKVAHMR-KTEGVRRNDFLQLMVEHQ 71
+ + F+ + + +F V +L K++ R + R DFLQLM++ Q
Sbjct: 198 FLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQ 257
Query: 72 DDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQ 131
+ + ET+ LS+ + AQSI+F+ AGYET+S++L F Y+
Sbjct: 258 N-------------------SKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYE 298
Query: 132 LSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTL 191
L+ + D+Q KL+ ++ +L + TY+ + M YL+MV+NETLR+ P R++R C
Sbjct: 299 LATHPDVQQKLQEEIDAVL-PNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKK 357
Query: 192 DYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGA 251
D + + I G V +P LH DPKY+ +P KF P+RF + K PY++ PFG+
Sbjct: 358 DVEING--MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGS 415
Query: 252 GPRNCIGN 259
GPRNCIG
Sbjct: 416 GPRNCIGM 423
Score = 280 bits (718), Expect = 3e-89
Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 22/205 (10%)
Query: 266 EMSENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILF 325
E ++ R DFLQLM++ Q+ + ET+ LS+ + AQSI+F
Sbjct: 240 EDTQKHRVDFLQLMIDSQN-------------------SKETESHKALSDLELVAQSIIF 280
Query: 326 LIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLN 385
+ AGYET+S++L F Y+L+ + D+Q KL+ ++ +L + TY+ + M YL+MV+N
Sbjct: 281 IFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL-PNKAPPTYDTVLQMEYLDMVVN 339
Query: 386 ETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRF 445
ETLR+ P R++R C D + + I G V +P LH DPKY+ +P KF P+RF
Sbjct: 340 ETLRLFPIAMRLERVCKKDVEING--MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 397
Query: 446 LPEEKAKRSPYVFLPFGAGPRNCIG 470
+ K PY++ PFG+GPRNCIG
Sbjct: 398 SKKNKDNIDPYIYTPFGSGPRNCIG 422
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 210 bits (536), Expect = 8e-63
Identities = 52/257 (20%), Positives = 99/257 (38%), Gaps = 40/257 (15%)
Query: 11 KRVILFMIIVFIPMFARFIPLSLFNSRVME----YLVALSKKVAHMRKTEGV----RRND 62
K ++ + + +F+P R + +L + + R+ D
Sbjct: 168 KLMLEGITASRNTLA-KFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPAD 226
Query: 63 FLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSS 122
L +++ ++ + ++ + + F IAG+ETS+
Sbjct: 227 ILTQILKAEEGA--------------------------QDDEGLLDNFVTFFIAGHETSA 260
Query: 123 TLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSV 182
L F +LS +I +L+A V+E++ +E L + YL VL E+LR++P
Sbjct: 261 NHLAFTVMELSRQPEIVARLQAEVDEVIGS-KRYLDFEDLGRLQYLSQVLKESLRLYPPA 319
Query: 183 ARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRS 242
R + + + + + + Y+ DP F+PDRF P A +
Sbjct: 320 WGTFRLLEEETLI--DGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPG--APKP 375
Query: 243 PYVFLPFGAGPRNCIGN 259
+ + PF G R+CIG
Sbjct: 376 RFTYFPFSLGHRSCIGQ 392
Score = 207 bits (528), Expect = 1e-61
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 31/205 (15%)
Query: 266 EMSENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILF 325
+ E D L +++ ++ + ++ + + F
Sbjct: 218 KRGEEVPADILTQILKAEEGA--------------------------QDDEGLLDNFVTF 251
Query: 326 LIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLN 385
IAG+ETS+ L F +LS +I +L+A V+E++ +E L + YL VL
Sbjct: 252 FIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGS-KRYLDFEDLGRLQYLSQVLK 310
Query: 386 ETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRF 445
E+LR++P R + + + + + + Y+ DP F+PDRF
Sbjct: 311 ESLRLYPPAWGTFRLLEEETLI--DGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF 368
Query: 446 LPEEKAKRSPYVFLPFGAGPRNCIG 470
P A + + + PF G R+CIG
Sbjct: 369 GPG--APKPRFTYFPFSLGHRSCIG 391
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 210 bits (536), Expect = 2e-62
Identities = 42/261 (16%), Positives = 83/261 (31%), Gaps = 37/261 (14%)
Query: 10 YKRVILFMIIVFIPMFARFIPLSLFNSRVMEYLVALSKKVAHMRKTEGVRRNDFLQLMVE 69
+ +++ P+ + +P + + S A ++ FL+ E
Sbjct: 213 PGLITKWVLFNLHPLLSIGLPRVIEEP----LIHTFSLPPALVKSDYQRLYEFFLESAGE 268
Query: 70 HQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSI-LFLIAGYETSSTLLMF- 127
+ K+ +S + T + + L
Sbjct: 269 ILVE----------------------ADKLGISREEATHNLLFATCFNTWGGMKILFPNM 306
Query: 128 ASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDR 187
+ ++L + ++ +GG+ T A++ M + V+ E LR P V
Sbjct: 307 VKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYG 366
Query: 188 HCTLDYTLPDTN--IVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYV 245
D + + ++AGE + DPK + +F P+RF+ EE K +V
Sbjct: 367 RAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHV 426
Query: 246 FLPFG-------AGPRNCIGN 259
G G + C G
Sbjct: 427 LWSNGPETETPTVGNKQCAGK 447
Score = 207 bits (529), Expect = 1e-61
Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 11/191 (5%)
Query: 291 DDVIKVKTVTVGENGETKQKVFLSEDTVTAQSI-LFLIAGYETSSTLLMF-ASYQLSLNV 348
+ + + GE K+ +S + T + + L
Sbjct: 256 QRLYEFFLESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGH 315
Query: 349 DIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLP 408
+ ++L + ++ +GG+ T A++ M + V+ E LR P V D +
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 409 DTN--IVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFG---- 462
+ ++AGE + DPK + +F P+RF+ EE K +V G
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETE 435
Query: 463 ---AGPRNCIG 470
G + C G
Sbjct: 436 TPTVGNKQCAG 446
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 205 bits (522), Expect = 9e-61
Identities = 38/263 (14%), Positives = 84/263 (31%), Gaps = 41/263 (15%)
Query: 10 YKRVILFMIIVFIPMFARFIPLSLFNSRVMEYLVALSKKVAHMRKTEGVRRNDFLQLMVE 69
+ +++ P +P L + + + + K ++ +M E
Sbjct: 195 PTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLYDYFQSVATPVM-E 253
Query: 70 HQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFAS 129
+ P D+ + + L
Sbjct: 254 QAEKLGVPKDEAV------------------------HNILFAVCFNTFGGVKILFPNTL 289
Query: 130 YQLSL-NVDIQDKLRAHVNEILDKHG-GKCTYEALQDMSYLEMVLNETLRMHPSVARVDR 187
+ L ++ +L + + +G G T EA++ M + V+ E+LR+ P V
Sbjct: 290 KWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYG 349
Query: 188 HCTLDYTLPDTN--IVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYV 245
++T+ + ++ GE + DPK + P ++ PDRF+ + +
Sbjct: 350 KAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGD---GEALLK 406
Query: 246 FLPFGAGP---------RNCIGN 259
++ + GP + C G
Sbjct: 407 YVWWSNGPETESPTVENKQCAGK 429
Score = 202 bits (516), Expect = 7e-60
Identities = 36/209 (17%), Positives = 73/209 (34%), Gaps = 19/209 (9%)
Query: 275 FLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSS 334
F + N D V T + + + ++ V +
Sbjct: 226 FRLPAFLIKSTYNKLYDYFQSVATPVMEQAEKLGVP---KDEAVHNILFAVCFNTFGGVK 282
Query: 335 TLLMFASYQLSL-NVDIQDKLRAHVNEILDKHG-GKCTYEALQDMSYLEMVLNETLRMHP 392
L + L ++ +L + + +G G T EA++ M + V+ E+LR+ P
Sbjct: 283 ILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEP 342
Query: 393 SVARVDRHCTLDYTLPDTN--IVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEK 450
V ++T+ + ++ GE + DPK + P ++ PDRF+ +
Sbjct: 343 PVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGD-- 400
Query: 451 AKRSPYVFLPFGAGP---------RNCIG 470
+ ++ + GP + C G
Sbjct: 401 -GEALLKYVWWSNGPETESPTVENKQCAG 428
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 202 bits (516), Expect = 1e-59
Identities = 67/255 (26%), Positives = 103/255 (40%), Gaps = 32/255 (12%)
Query: 9 VYKRVILFMIIVFIPMFARFIPLSL---FNSRVMEYLVALSKKVAHMRKTEGVRRNDFLQ 65
+ + + M + F ++ + L K+ RK G + +D L
Sbjct: 177 MVRALDEAMNKLQRANPDDPAYDENKRQFQ-EDIKVMNDLVDKIIADRKASGEQSDDLLT 235
Query: 66 LMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLL 125
M+ +D E GE L ++ + Q I FLIAG+ET+S LL
Sbjct: 236 HMLNGKDP-----------------ETGEP-----LDDENIRYQIITFLIAGHETTSGLL 273
Query: 126 MFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV 185
FA Y L N + K +L +Y+ ++ + Y+ MVLNE LR+ P+
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF 331
Query: 186 DRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYP-DPYKFDPDRFLPEEKAKRSPY 244
+ D L + G+ + V I LH D + D +F P+RF E + +
Sbjct: 332 SLYAKEDTVLGG-EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQH 388
Query: 245 VFLPFGAGPRNCIGN 259
F PFG G R CIG
Sbjct: 389 AFKPFGNGQRACIGQ 403
Score = 196 bits (501), Expect = 2e-57
Identities = 61/204 (29%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 268 SENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLI 327
S + +D L M+ +D E GE L ++ + Q I FLI
Sbjct: 226 SGEQSDDLLTHMLNGKDP-----------------ETGEP-----LDDENIRYQIITFLI 263
Query: 328 AGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNET 387
AG+ET+S LL FA Y L N + K +L +Y+ ++ + Y+ MVLNE
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGMVLNEA 321
Query: 388 LRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYP-DPYKFDPDRFL 446
LR+ P+ + D L + G+ + V I LH D + D +F P+RF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGG-EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF- 379
Query: 447 PEEKAKRSPYVFLPFGAGPRNCIG 470
E + + F PFG G R CIG
Sbjct: 380 -ENPSAIPQHAFKPFGNGQRACIG 402
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 201 bits (514), Expect = 2e-59
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 27/223 (12%)
Query: 37 RVMEYLVALSKKVAHMRKTEGVRRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETK 96
+ L L ++ R+ G + +D L ++E +D +NG+
Sbjct: 218 DALADLHLLVDEIIAERRASGQKPDDLLTALLEAKD------------------DNGDP- 258
Query: 97 QKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGK 156
+ E + Q + L G ET ++ +M+ L+ + + D++R V + G
Sbjct: 259 ----IGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG--GRP 312
Query: 157 CTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLH 216
+E ++ + + V+ E +R+ P+V + R + L I AG + +
Sbjct: 313 VAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGG--YRIPAGADIIYSPYAIQ 370
Query: 217 YDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIGN 259
DPK Y D +FDPDR+LPE A Y PF AG R C +
Sbjct: 371 RDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSD 413
Score = 193 bits (493), Expect = 2e-56
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 27/203 (13%)
Query: 268 SENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLI 327
S K +D L ++E +D +NG+ + E + Q + L
Sbjct: 237 SGQKPDDLLTALLEAKD------------------DNGDP-----IGEQEIHDQVVAILT 273
Query: 328 AGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNET 387
G ET ++ +M+ L+ + + D++R V + G +E ++ + + V+ E
Sbjct: 274 PGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG--GRPVAFEDVRKLRHTGNVIVEA 331
Query: 388 LRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLP 447
+R+ P+V + R + L I AG + + DPK Y D +FDPDR+LP
Sbjct: 332 MRLRPAVWVLTRRAVAESELGG--YRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLP 389
Query: 448 EEKAKRSPYVFLPFGAGPRNCIG 470
E A Y PF AG R C
Sbjct: 390 ERAANVPKYAMKPFSAGKRKCPS 412
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 199 bits (508), Expect = 9e-59
Identities = 56/255 (21%), Positives = 97/255 (38%), Gaps = 32/255 (12%)
Query: 6 DIPVYKRVILFMIIVFIPMFARFIPLSLFNSRVMEYLVALSKKVAHMRKTEGVRRNDFLQ 65
D L + +P F R R + + K R+ + +D LQ
Sbjct: 183 DGGFSHAAWLLPGWLPLPSFRRRD-------RAHREIKDIFYKAIQKRRQSQEKIDDILQ 235
Query: 66 LMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLL 125
+++ ++G L++D V I L+AG TSST
Sbjct: 236 TLLDATY------------------KDGRP-----LTDDEVAGMLIGLLLAGQHTSSTTS 272
Query: 126 MFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV 185
+ + L+ + +Q K + ++ TY+ L+D++ L+ + ETLR+ P + +
Sbjct: 273 AWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIM 332
Query: 186 DRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYV 245
R T+ I G V V + + F+PDR+L + A +
Sbjct: 333 MRMARTPQTVAG--YTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFA 390
Query: 246 FLPFGAGPRNCIGNT 260
++PFGAG CIG
Sbjct: 391 YVPFGAGRHRCIGEN 405
Score = 192 bits (491), Expect = 3e-56
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 268 SENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLI 327
S+ K +D LQ +++ ++G L++D V I L+
Sbjct: 226 SQEKIDDILQTLLDATY------------------KDGRP-----LTDDEVAGMLIGLLL 262
Query: 328 AGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNET 387
AG TSST + + L+ + +Q K + ++ TY+ L+D++ L+ + ET
Sbjct: 263 AGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKET 322
Query: 388 LRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLP 447
LR+ P + + R T+ I G V V + + F+PDR+L
Sbjct: 323 LRLRPPIMIMMRMARTPQTVAG--YTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQ 380
Query: 448 EEKAKRSPYVFLPFGAGPRNCIG 470
+ A + ++PFGAG CIG
Sbjct: 381 DNPASGEKFAYVPFGAGRHRCIG 403
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 187 bits (477), Expect = 9e-54
Identities = 41/225 (18%), Positives = 85/225 (37%), Gaps = 45/225 (20%)
Query: 265 SEMSENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSIL 324
+E + DF ++ + + L+ + V +
Sbjct: 268 TEEKLEECMDFATELILAEKRGD-------------------------LTRENVNQCILE 302
Query: 325 FLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVL 384
LIA +T S L F + ++ + ++++ + + ++ + + +Q + +E +
Sbjct: 303 MLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE--RDIKIDDIQKLKVMENFI 360
Query: 385 NETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDR 444
E++R P V V R D + ++ G ++ + I +H +++P P +F +
Sbjct: 361 YESMRYQPVVDLVMRKALEDDVI--DGYPVKKGTNIILNIGRMH-RLEFFPKPNEFTLEN 417
Query: 445 FLPEEKAKRSPYVFLPFGAGPRNCIGFKI-----------LVRRY 478
F F PFG GPR C G I L+RR+
Sbjct: 418 FAKN----VPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRF 458
Score = 187 bits (476), Expect = 1e-53
Identities = 39/252 (15%), Positives = 91/252 (36%), Gaps = 40/252 (15%)
Query: 14 ILFMIIVFIPMFARFIPLSLFNSRVMEYLVALSKKVAHMRKTEGV------RRNDFLQLM 67
+++ +F + L + ++ L + + ++ DF +
Sbjct: 223 AWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATEL 282
Query: 68 VEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMF 127
+ + + L+ + V + LIA +T S L F
Sbjct: 283 ILAEKRGD-------------------------LTRENVNQCILEMLIAAPDTMSVSLFF 317
Query: 128 ASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDR 187
+ ++ + ++++ + + ++ + + +Q + +E + E++R P V V R
Sbjct: 318 MLFLIAKHPNVEEAIIKEIQTVIGE--RDIKIDDIQKLKVMENFIYESMRYQPVVDLVMR 375
Query: 188 HCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFL 247
D + ++ G ++ + I +H +++P P +F + F F
Sbjct: 376 KALEDDVI--DGYPVKKGTNIILNIGRMH-RLEFFPKPNEFTLENFAKN----VPYRYFQ 428
Query: 248 PFGAGPRNCIGN 259
PFG GPR C G
Sbjct: 429 PFGFGPRGCAGK 440
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 184 bits (468), Expect = 1e-52
Identities = 55/249 (22%), Positives = 93/249 (37%), Gaps = 36/249 (14%)
Query: 14 ILFMIIVFIPMFARFIPLSLFN--SRVMEYLVALSKKV--AHMRKTEGVRRNDFLQLMVE 69
++V + + ++ + + + K +++ DFL + +
Sbjct: 216 TFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQPGADFLCDIYQ 275
Query: 70 HQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFAS 129
LS+ + A +A ET++ LM+
Sbjct: 276 QDH----------------------------LSKKELYAAVTELQLAAVETTANSLMWIL 307
Query: 130 YQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHC 189
Y LS N Q +L V +L E L++M YL+ L E++R+ PSV R
Sbjct: 308 YNLSRNPQAQRRLLQEVQSVLPD-NQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTL 366
Query: 190 TLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPF 249
L + G + + L + D +KF P+R+L +EK K +P+ LPF
Sbjct: 367 DKPTVL--GEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEK-KINPFAHLPF 423
Query: 250 GAGPRNCIG 258
G G R CIG
Sbjct: 424 GIGKRMCIG 432
Score = 178 bits (453), Expect = 1e-50
Identities = 54/205 (26%), Positives = 81/205 (39%), Gaps = 32/205 (15%)
Query: 266 EMSENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILF 325
S+ DFL + + LS+ + A
Sbjct: 260 RYSQQPGADFLCDIYQQDH----------------------------LSKKELYAAVTEL 291
Query: 326 LIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLN 385
+A ET++ LM+ Y LS N Q +L V +L E L++M YL+ L
Sbjct: 292 QLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPD-NQTPRAEDLRNMPYLKACLK 350
Query: 386 ETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRF 445
E++R+ PSV R L + G + + L + D +KF P+R+
Sbjct: 351 ESMRLTPSVPFTTRTLDKPTVL--GEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERW 408
Query: 446 LPEEKAKRSPYVFLPFGAGPRNCIG 470
L +EK K +P+ LPFG G R CIG
Sbjct: 409 LQKEK-KINPFAHLPFGIGKRMCIG 432
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 182 bits (464), Expect = 2e-52
Identities = 69/239 (28%), Positives = 105/239 (43%), Gaps = 40/239 (16%)
Query: 29 IPLSLFNS--RVMEYLVALSKKVAHMRKTEGVRRNDFLQLMVEHQDDSNAPSDDVIKVKT 86
+P +LF R L+A +K+ R+ + D L +++ +D
Sbjct: 188 LPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDALGILLAARD-------------- 233
Query: 87 VTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHV 146
+N + LS + Q +L L AG+ET ++ L L + DI++++R
Sbjct: 234 ----DNNQ-----PLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQ 284
Query: 147 NEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLD-----YTLPDTNIV 201
N++ + T E L+ M YL+ VL E LR+ P V R D + P
Sbjct: 285 NKLQL--SQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFP----- 337
Query: 202 IRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKA-KRSPYVFLPFGAGPRNCIGN 259
G V+ I H DP YPDP KFDP+RF P+ A P+ +PFG G R C+G
Sbjct: 338 --KGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGK 394
Score = 174 bits (442), Expect = 2e-49
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 38/209 (18%)
Query: 268 SENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLI 327
D L +++ +D +N + LS + Q +L L
Sbjct: 217 QPPSEEDALGILLAARD------------------DNNQ-----PLSLPELKDQILLLLF 253
Query: 328 AGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNET 387
AG+ET ++ L L + DI++++R N++ + T E L+ M YL+ VL E
Sbjct: 254 AGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQL--SQELTAETLKKMPYLDQVLQEV 311
Query: 388 LRMHPSVARVDRHCTLD-----YTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDP 442
LR+ P V R D + P G V+ I H DP YPDP KFDP
Sbjct: 312 LRLIPPVGGGFRELIQDCQFQGFHFP-------KGWLVSYQISQTHADPDLYPDPEKFDP 364
Query: 443 DRFLPEEKA-KRSPYVFLPFGAGPRNCIG 470
+RF P+ A P+ +PFG G R C+G
Sbjct: 365 ERFTPDGSATHNPPFAHVPFGGGLRECLG 393
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 182 bits (464), Expect = 2e-52
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 26/207 (12%)
Query: 265 SEMSENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSIL 324
+ ++ D L +++ + E G + S D +T I
Sbjct: 215 NPPTDKSDRDMLDVLIAVKA------------------ETGTPR----FSADEITGMFIS 252
Query: 325 FLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVL 384
+ AG+ TSS + +L + D + ++E+ G ++ AL+ + LE VL
Sbjct: 253 MMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELY-GDGRSVSFHALRQIPQLENVL 311
Query: 385 NETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDR 444
ETLR+HP + + R ++ + I G+ V + P+ +PDP+ F P R
Sbjct: 312 KETLRLHPPLIILMRVAKGEFEVQGH--RIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 445 FLPEEKA-KRSPYVFLPFGAGPRNCIG 470
+ + + + ++PFGAG C+G
Sbjct: 370 YEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Score = 182 bits (463), Expect = 3e-52
Identities = 55/242 (22%), Positives = 94/242 (38%), Gaps = 36/242 (14%)
Query: 22 IPMFARFIPLSLFNSRVMEYLVALSKKVAHMRK---TEGVRRNDFLQLMVEHQDDSNAPS 78
I F R LVAL + + R D L +++ +
Sbjct: 188 IESFRRRD-------EARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKA------ 234
Query: 79 DDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDI 138
E G + S D +T I + AG+ TSS + +L + D
Sbjct: 235 ------------ETGTPR----FSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDA 278
Query: 139 QDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLPDT 198
+ ++E+ G ++ AL+ + LE VL ETLR+HP + + R ++ +
Sbjct: 279 YAAVIDELDELY-GDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH 337
Query: 199 NIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKA-KRSPYVFLPFGAGPRNCI 257
I G+ V + P+ +PDP+ F P R+ + + + ++PFGAG C+
Sbjct: 338 --RIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 395
Query: 258 GN 259
G
Sbjct: 396 GA 397
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 181 bits (462), Expect = 7e-52
Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 35/249 (14%)
Query: 16 FMIIVFIPMFARFIPLSLFNS------RVMEYLVALSKKVAHMRKTEGVRRNDFLQLMVE 69
++ P R + + ++ + +G +D+ ++
Sbjct: 205 VPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYR 264
Query: 70 HQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFAS 129
DS +S + + A L G +T+S L +
Sbjct: 265 LLGDSK-------------------------MSFEDIKANVTEMLAGGVDTTSMTLQWHL 299
Query: 130 YQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHC 189
Y+++ N+ +QD LRA V + G LQ + L+ + ETLR+HP + R+
Sbjct: 300 YEMARNLKVQDMLRAEVLAARHQAQGD-MATMLQLVPLLKASIKETLRLHPISVTLQRYL 358
Query: 190 TLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPF 249
D L + +I A V V I L +P ++ DP FDP R+L ++K + + L F
Sbjct: 359 VNDLVL--RDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDK-NITYFRNLGF 415
Query: 250 GAGPRNCIG 258
G G R C+G
Sbjct: 416 GWGVRQCLG 424
Score = 175 bits (447), Expect = 1e-49
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 4/158 (2%)
Query: 313 LSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYE 372
+S + + A L G +T+S L + Y+++ N+ +QD LRA V + G
Sbjct: 271 MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGD-MAT 329
Query: 373 ALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPK 432
LQ + L+ + ETLR+HP + R+ D L + +I A V V I L +P
Sbjct: 330 MLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL--RDYMIPAKTLVQVAIYALGREPT 387
Query: 433 YYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 470
++ DP FDP R+L ++K + + L FG G R C+G
Sbjct: 388 FFFDPENFDPTRWLSKDK-NITYFRNLGFGWGVRQCLG 424
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 172 bits (438), Expect = 3e-48
Identities = 50/264 (18%), Positives = 93/264 (35%), Gaps = 46/264 (17%)
Query: 16 FMIIVFIPMFARFIPLSLFNSRVMEYLVA-LSKKVAHMRKTEGVRRNDFLQLMVEHQDDS 74
F + + LS+ + M + + L K ++ R R+ +L+ + H ++
Sbjct: 197 FRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARRAHRSKWLESYLLHLEEM 256
Query: 75 NAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSL 134
+SE+ +L L A + L
Sbjct: 257 G-------------------------VSEEMQARALVLQLWATQGNMGPAAFWLLLFLLK 291
Query: 135 NVDIQDKLRAHVNEILDKHGGKC------TYEALQDMSYLEMVLNETLRMHPSVARVDRH 188
N + +R + IL + + L L+ VL+E+LR+ + R
Sbjct: 292 NPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA-APFITRE 350
Query: 189 CTLDYTLPDTNI---VIRAGESVNV-PIMGLHYDPKYYPDPYKFDPDRFLPEE------- 237
+D +P + +R G+ + + P + DP+ Y DP F +RFL +
Sbjct: 351 VVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDF 410
Query: 238 --KAKRSPYVFLPFGAGPRNCIGN 259
KR +P+GAG +C+G
Sbjct: 411 YKDGKRLKNYNMPWGAGHNHCLGR 434
Score = 165 bits (419), Expect = 1e-45
Identities = 46/237 (19%), Positives = 89/237 (37%), Gaps = 27/237 (11%)
Query: 253 PRNCIGNTTWIFSEMSENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVF 312
P+ G+ + + + ++ +L+ + A ++ + + E G
Sbjct: 205 PKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARRAHRSKWLESYLLHLEEMG------- 257
Query: 313 LSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKC--- 369
+SE+ +L L A + L N + +R + IL +
Sbjct: 258 VSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQT 317
Query: 370 ---TYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLPDTNI---VIRAGESVNV- 422
+ L L+ VL+E+LR+ + R +D +P + +R G+ + +
Sbjct: 318 TTLPQKVLDSTPVLDSVLSESLRLTA-APFITREVVVDLAMPMADGREFNLRRGDRLLLF 376
Query: 423 PIMGLHYDPKYYPDPYKFDPDRFLPEE---------KAKRSPYVFLPFGAGPRNCIG 470
P + DP+ Y DP F +RFL + KR +P+GAG +C+G
Sbjct: 377 PFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLG 433
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 168 bits (429), Expect = 2e-47
Identities = 45/254 (17%), Positives = 86/254 (33%), Gaps = 42/254 (16%)
Query: 15 LFMIIVFIPMFARFIPLSLFN--SRVMEYLVALSKKVAHMRKTEGV----RRNDFLQLMV 68
+ +PL L + ++ RK E V +D L ++
Sbjct: 180 SLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLL 239
Query: 69 EHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFA 128
+G +S V + + AG TSS ++
Sbjct: 240 SAVY------------------RDGTP-----MSLHEVCGMIVAAMFAGQHTSSITTTWS 276
Query: 129 SYQLSLNVDI--QDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVD 186
L ++ + LR + E + + +M + E E++R P + +
Sbjct: 277 MLHLMHPANVKHLEALRKEIEEFPAQLN---YNNVMDEMPFAERCARESIRRDPPLLMLM 333
Query: 187 RHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVF 246
R D + V+ G+ + + H+D + +P+P ++DP+R ++ F
Sbjct: 334 RKVMADVKVGS--YVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERD------EKVEGAF 385
Query: 247 LPFGAGPRNCIGNT 260
+ FGAG CIG
Sbjct: 386 IGFGAGVHKCIGQK 399
Score = 167 bits (426), Expect = 5e-47
Identities = 38/204 (18%), Positives = 76/204 (37%), Gaps = 36/204 (17%)
Query: 269 ENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIA 328
++ +D L ++ +G +S V + + A
Sbjct: 228 DSSTSDLLSGLLSAVY------------------RDGTP-----MSLHEVCGMIVAAMFA 264
Query: 329 GYETSSTLLMFASYQLSLNVDI--QDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNE 386
G TSS ++ L ++ + LR + E + + +M + E E
Sbjct: 265 GQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLN---YNNVMDEMPFAERCARE 321
Query: 387 TLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFL 446
++R P + + R D + V+ G+ + + H+D + +P+P ++DP+R
Sbjct: 322 SIRRDPPLLMLMRKVMADVKVGS--YVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERD- 378
Query: 447 PEEKAKRSPYVFLPFGAGPRNCIG 470
++ F+ FGAG CIG
Sbjct: 379 -----EKVEGAFIGFGAGVHKCIG 397
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 166 bits (423), Expect = 3e-46
Identities = 49/272 (18%), Positives = 94/272 (34%), Gaps = 47/272 (17%)
Query: 9 VYKRVILFMIIVFI-PMFARFIPLSLFNSRVMEYLVALSKKVAHMRKTEGVRRNDFLQLM 67
+ + F + P +P+ +F L++ + H + ++ + L
Sbjct: 185 ILNNLDNFKQFDKVFPALVAGLPIHMFR-TAHNAREKLAESLRHENLQKRESISELISLR 243
Query: 68 VEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMF 127
+ D + D ++ L A + +
Sbjct: 244 MFLNDTLSTFDDLEKA------------------------KTHLVVLWASQANTIPATFW 279
Query: 128 ASYQLSLNVDIQDKLRAHVNEILDKHGGKC---------TYEALQDMSYLEMVLNETLRM 178
+ +Q+ N + V L+ G K + L D+ L+ ++ E+LR+
Sbjct: 280 SLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRL 339
Query: 179 HPSVARVDRHCTLDYTLP--DTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPE 236
+ + R D+TL D + IR + + + +H DP+ YPDP F DR+L E
Sbjct: 340 SSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDE 398
Query: 237 EK---------AKRSPYVFLPFGAGPRNCIGN 259
+ Y ++PFG+G C G
Sbjct: 399 NGKTKTTFYCNGLKLKYYYMPFGSGATICPGR 430
Score = 155 bits (394), Expect = 4e-42
Identities = 43/219 (19%), Positives = 82/219 (37%), Gaps = 27/219 (12%)
Query: 272 RNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYE 331
R + + ++I ++ + + T + ++ L A
Sbjct: 218 REKLAESLRHENLQKRESISELISLRM-FLNDTLST-----FDDLEKAKTHLVVLWASQA 271
Query: 332 TSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKC---------TYEALQDMSYLEM 382
+ ++ +Q+ N + V L+ G K + L D+ L+
Sbjct: 272 NTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDS 331
Query: 383 VLNETLRMHPSVARVDRHCTLDYTLP--DTNIVIRAGESVNVPIMGLHYDPKYYPDPYKF 440
++ E+LR+ + + R D+TL D + IR + + + +H DP+ YPDP F
Sbjct: 332 IIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTF 390
Query: 441 DPDRFLPEEK---------AKRSPYVFLPFGAGPRNCIG 470
DR+L E + Y ++PFG+G C G
Sbjct: 391 KYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPG 429
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 149 bits (379), Expect = 9e-41
Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 25/160 (15%)
Query: 101 LSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYE 160
L + ++++ L+AG+ET ++ L ++ LS D Q ++ L
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL---------- 255
Query: 161 ALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPK 220
E LR++P + R L + + G ++ +
Sbjct: 256 ---------AAFQEALRLYPPAWILTRRLERPLLLGE--DRLPPGTTLVLSPYVTQRLH- 303
Query: 221 YYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIGNT 260
+PD F P+RFL E + PFG G R C+G
Sbjct: 304 -FPDGEAFRPERFLEE--RGTPSGRYFPFGLGQRLCLGRD 340
Score = 148 bits (377), Expect = 2e-40
Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 25/158 (15%)
Query: 313 LSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYE 372
L + ++++ L+AG+ET ++ L ++ LS D Q ++ L
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL---------- 255
Query: 373 ALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPK 432
E LR++P + R L + + G ++ +
Sbjct: 256 ---------AAFQEALRLYPPAWILTRRLERPLLLGE--DRLPPGTTLVLSPYVTQRLH- 303
Query: 433 YYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 470
+PD F P+RFL E + PFG G R C+G
Sbjct: 304 -FPDGEAFRPERFLEE--RGTPSGRYFPFGLGQRLCLG 338
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 147 bits (372), Expect = 1e-39
Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 51/210 (24%)
Query: 265 SEMSENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSIL 324
+ + + L M H + + D + A ++
Sbjct: 203 AGLLKTTSGTALHEMAFHTQEDGSQLDS------------------------RMAAIELI 238
Query: 325 FLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVL 384
++ S L+F++ L + ++ LR+ + EM +
Sbjct: 239 NVLRPIVAISYFLVFSALALHEHPKYKEWLRS------------------GNSREREMFV 280
Query: 385 NETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDR 444
E R +P + D+ + + G SV + + G ++DP+ + P +F P+R
Sbjct: 281 QEVRRYYPFGPFLGALVKKDFVWNNC--EFKKGTSVLLDLYGTNHDPRLWDHPDEFRPER 338
Query: 445 FLPEEKAKRSPYVFLPFGAGP----RNCIG 470
F + + + +P G G C G
Sbjct: 339 FAER---EENLFDMIPQGGGHAEKGHRCPG 365
Score = 145 bits (369), Expect = 3e-39
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 56/248 (22%)
Query: 21 FIPMFARFIPLSLFNSRVMEYLVALSKKV-----AHMRKTEGVRRNDFLQLMVEHQDDSN 75
FI M F + + + + + L M H +
Sbjct: 166 FIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDG 225
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
+ D + A ++ ++ S L+F++ L +
Sbjct: 226 SQLDS------------------------RMAAIELINVLRPIVAISYFLVFSALALHEH 261
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
++ LR+ + EM + E R +P + D+
Sbjct: 262 PKYKEWLRS------------------GNSREREMFVQEVRRYYPFGPFLGALVKKDFVW 303
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP-- 253
+ + G SV + + G ++DP+ + P +F P+RF + + + +P G G
Sbjct: 304 NNC--EFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAER---EENLFDMIPQGGGHAE 358
Query: 254 --RNCIGN 259
C G
Sbjct: 359 KGHRCPGE 366
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 138 bits (349), Expect = 2e-36
Identities = 37/250 (14%), Positives = 71/250 (28%), Gaps = 64/250 (25%)
Query: 21 FIPMFARFIPLSLFNSRVMEYLVALSKKV--AHMRKTEGVRRNDFLQLMVEHQDDSNAPS 78
P L++ + A +K++ + G + H+D +
Sbjct: 168 LFDAAGSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLL 227
Query: 79 DDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDI 138
+ A ++ ++ + + F ++ L I
Sbjct: 228 SPHVA------------------------AVELVNVLRPTVAIAVYITFVAHALQTCSGI 263
Query: 139 QDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLD-----Y 193
+ L +Q Y E+ + E R +P V + D
Sbjct: 264 RAAL-------------------VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGM 304
Query: 194 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 253
P G V + + G ++D + DP +F P+RF + F+P G G
Sbjct: 305 AFP-------EGRQVVLDLYGSNHDAATWADPQEFRPERFRAW---DEDSFNFIPQGGGD 354
Query: 254 ----RNCIGN 259
C G
Sbjct: 355 HYLGHRCPGE 364
Score = 134 bits (340), Expect = 3e-35
Identities = 34/212 (16%), Positives = 66/212 (31%), Gaps = 46/212 (21%)
Query: 270 NKRNDFLQLMVEH--QDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLI 327
+ + + + ++E + S + + L V A ++ ++
Sbjct: 187 RRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDD------LLSPHVAAVELVNVL 240
Query: 328 AGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNET 387
+ + F ++ L I+ L +Q Y E+ + E
Sbjct: 241 RPTVAIAVYITFVAHALQTCSGIRAAL-------------------VQQPDYAELFVQEV 281
Query: 388 LRMHPSVARVDRHCTLD-----YTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDP 442
R +P V + D P G V + + G ++D + DP +F P
Sbjct: 282 RRFYPFFPAVVARASQDFEWEGMAFP-------EGRQVVLDLYGSNHDAATWADPQEFRP 334
Query: 443 DRFLPEEKAKRSPYVFLPFGAGP----RNCIG 470
+RF + F+P G G C G
Sbjct: 335 ERFRAW---DEDSFNFIPQGGGDHYLGHRCPG 363
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 127 bits (320), Expect = 5e-32
Identities = 44/259 (16%), Positives = 75/259 (28%), Gaps = 43/259 (16%)
Query: 14 ILFMIIVFIPMFARFIPLSLFNSRVMEYLVALSKKVAHMRKTEGVRRNDFLQLMVEHQDD 73
+P AR L K + R +L V+ D
Sbjct: 187 EFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPREQSWLGSYVKQLQD 246
Query: 74 SNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLS 133
++ + +L L + + L
Sbjct: 247 EGIDAEMQRRA-------------------------MLLQLWVTQGNAGPAAFWVMGYLL 281
Query: 134 LNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDY 193
+ + +R EI E ++ + VL ETLR+ + + R T D
Sbjct: 282 THPEALRAVRE---EI-QGGKHLRLEERQKNTPVFDSVLWETLRLTAAAL-ITRDVTQDK 336
Query: 194 TLPDTNI---VIRAGESVNV-PIMGLHYDPKYYPDPYKFDPDRFLPEEK---------AK 240
+ +N +R G+ + V P + DP+ + P F DRFL ++
Sbjct: 337 KICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGA 396
Query: 241 RSPYVFLPFGAGPRNCIGN 259
R Y +P+G C G
Sbjct: 397 RVKYPSVPWGTEDNLCPGR 415
Score = 121 bits (306), Expect = 4e-30
Identities = 38/218 (17%), Positives = 72/218 (33%), Gaps = 25/218 (11%)
Query: 266 EMSENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILF 325
+++ R + + D + + + G + + +L
Sbjct: 209 QIASAAREKLWKWLTPSGLDRKPREQSWLGSYVKQLQDEG-------IDAEMQRRAMLLQ 261
Query: 326 LIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLN 385
L + + L + + +R EI E ++ + VL
Sbjct: 262 LWVTQGNAGPAAFWVMGYLLTHPEALRAVRE---EI-QGGKHLRLEERQKNTPVFDSVLW 317
Query: 386 ETLRMHPSVARVDRHCTLDYTLPDTNI---VIRAGESVNV-PIMGLHYDPKYYPDPYKFD 441
ETLR+ + + R T D + +N +R G+ + V P + DP+ + P F
Sbjct: 318 ETLRLTAAAL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQ 376
Query: 442 PDRFLPEEK---------AKRSPYVFLPFGAGPRNCIG 470
DRFL ++ R Y +P+G C G
Sbjct: 377 FDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPG 414
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 99.6 bits (249), Expect = 1e-22
Identities = 55/261 (21%), Positives = 90/261 (34%), Gaps = 37/261 (14%)
Query: 16 FMIIVFIPMFARFIPLSLFNSRVMEYLVALSKKVAHMRKTEGVRRNDFLQLMV-EHQ--- 71
F V +P ++Y + V + ++F+ H
Sbjct: 191 FGRTVGAGSLVDVMP-------WLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESL 243
Query: 72 DDSNAPSD--DVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFAS 129
AP D D + L + V A A +T ST L +
Sbjct: 244 RPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLL 303
Query: 130 YQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MSYLEMVLNETLRMHPSVARVD 186
+ D+Q +++A E+ D+ G+ + D + Y+ L E +R V
Sbjct: 304 LLFTRYPDVQTRVQA---EL-DQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTI 359
Query: 187 RHCTL------DYTLP-DTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKA 239
H T Y +P DT + + N +++DP +P+P FDP RFL ++
Sbjct: 360 PHATTANTSVLGYHIPKDTVVFV------N--QWSVNHDPLKWPNPENFDPARFLDKDGL 411
Query: 240 --KRSPYVFLPFGAGPRNCIG 258
K + F G R CIG
Sbjct: 412 INKDLTSRVMIFSVGKRRCIG 432
Score = 96.5 bits (241), Expect = 1e-21
Identities = 53/228 (23%), Positives = 85/228 (37%), Gaps = 32/228 (14%)
Query: 263 IFSEMSENKR--NDFLQLMV-EHQ---DDSNAPSD--DVIKVKTVTVGENGETKQKVFLS 314
+F E + R ++F+ H AP D D + L
Sbjct: 217 VFREFEQLNRNFSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLD 276
Query: 315 EDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEAL 374
+ V A A +T ST L + + D+Q +++A E+ D+ G+ +
Sbjct: 277 LENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQA---EL-DQVVGRDRLPCM 332
Query: 375 QD---MSYLEMVLNETLRMHPSVARVDRHCTL------DYTLP-DTNIVIRAGESVNVPI 424
D + Y+ L E +R V H T Y +P DT + + N
Sbjct: 333 GDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFV------N--Q 384
Query: 425 MGLHYDPKYYPDPYKFDPDRFLPEEKA--KRSPYVFLPFGAGPRNCIG 470
+++DP +P+P FDP RFL ++ K + F G R CIG
Sbjct: 385 WSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIG 432
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 98.4 bits (246), Expect = 3e-22
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 33/221 (14%)
Query: 270 NKRNDFLQLMV-EHQD--DSNAPSD--D---VIKVKTVTVGENGETKQKVFLSEDTVTAQ 321
RND L ++ +++ S++ ++ D K+ + + ++ +T
Sbjct: 219 KIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTI 278
Query: 322 SILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MS 378
+F AG ET+++++ + L N ++ KL EI D++ G + D +
Sbjct: 279 GDIF-GAGVETTTSVVKWTLAFLLHNPQVKKKLYE---EI-DQNVGFSRTPTISDRNRLL 333
Query: 379 YLEMVLNETLRMHPSVARVDRHCTL------DYTLP-DTNIVIRAGESVNVPIMGLHYDP 431
LE + E LR+ P + H ++ + T ++I N + LH++
Sbjct: 334 LLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVII------N--LWALHHNE 385
Query: 432 KYYPDPYKFDPDRFLPEE--KAKRSPYVFLPFGAGPRNCIG 470
K + P +F P+RFL + +LPFGAGPR+CIG
Sbjct: 386 KEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIG 426
Score = 98.0 bits (245), Expect = 4e-22
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 59 RRNDFLQLMV-EHQD--DSNAPSD--D---VIKVKTVTVGENGETKQKVFLSEDTVTAQS 110
RND L ++ +++ S++ ++ D K+ + + ++ +T
Sbjct: 220 IRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIG 279
Query: 111 ILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MSY 167
+F AG ET+++++ + L N ++ KL EI D++ G + D +
Sbjct: 280 DIF-GAGVETTTSVVKWTLAFLLHNPQVKKKLYE---EI-DQNVGFSRTPTISDRNRLLL 334
Query: 168 LEMVLNETLRMHPSVARVDRHCTL------DYTLP-DTNIVIRAGESVNVPIMGLHYDPK 220
LE + E LR+ P + H ++ + T ++I N + LH++ K
Sbjct: 335 LEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVII------N--LWALHHNEK 386
Query: 221 YYPDPYKFDPDRFLPEE--KAKRSPYVFLPFGAGPRNCIG 258
+ P +F P+RFL + +LPFGAGPR+CIG
Sbjct: 387 EWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIG 426
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 96.9 bits (242), Expect = 9e-22
Identities = 51/226 (22%), Positives = 89/226 (39%), Gaps = 35/226 (15%)
Query: 263 IFSEMSENKRNDFLQLMV-EHQD--DSNAPSD--DVIKVKTVTVGENGETKQKVFLSEDT 317
F ++ + FLQ V EH D N+ D + + + G + ++
Sbjct: 228 RFKAFNQ-RFLWFLQKTVQEHYQDFDKNSVRDITGALFKHS----KKGPRASGNLIPQEK 282
Query: 318 VTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD- 376
+ AG++T +T + ++ L +IQ K++ E+ D G+ L D
Sbjct: 283 IVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQK---EL-DTVIGRERRPRLSDR 338
Query: 377 --MSYLEMVLNETLRMHPSVARVDRHCTL------DYTLP-DTNIVIRAGESVNVPIMGL 427
+ YLE + ET R + H T + +P + + N +
Sbjct: 339 PQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFV------N--QWQV 390
Query: 428 HYDPKYYPDPYKFDPDRFLPEE---KAKRSPYVFLPFGAGPRNCIG 470
++DP+ + DP +F P+RFL + K + FG G R CIG
Sbjct: 391 NHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIG 436
Score = 95.7 bits (239), Expect = 2e-21
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 34/218 (15%)
Query: 59 RRNDFLQLMV-EHQD--DSNAPSD--DVIKVKTVTVGENGETKQKVFLSEDTVTAQSILF 113
R FLQ V EH D N+ D + + + G + ++ +
Sbjct: 235 RFLWFLQKTVQEHYQDFDKNSVRDITGALFKHS----KKGPRASGNLIPQEKIVNLVNDI 290
Query: 114 LIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MSYLEM 170
AG++T +T + ++ L +IQ K++ E+ D G+ L D + YLE
Sbjct: 291 FGAGFDTVTTAISWSLMYLVTKPEIQRKIQK---EL-DTVIGRERRPRLSDRPQLPYLEA 346
Query: 171 VLNETLRMHPSVARVDRHCTL------DYTLP-DTNIVIRAGESVNVPIMGLHYDPKYYP 223
+ ET R + H T + +P + + N +++DP+ +
Sbjct: 347 FILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFV------N--QWQVNHDPELWE 398
Query: 224 DPYKFDPDRFLPEE---KAKRSPYVFLPFGAGPRNCIG 258
DP +F P+RFL + K + FG G R CIG
Sbjct: 399 DPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIG 436
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 93.4 bits (233), Expect = 1e-20
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 37/219 (16%)
Query: 270 NKRNDFLQLMV-EHQD--DSNAPSD--DVIKVKTVTVGENGETKQKVFLSEDTVTAQSIL 324
R+ ++ + H++ + D D + VG + L E V +
Sbjct: 230 ENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQG---VGRQRVEEGPGQLLEGHVHMSVVD 286
Query: 325 FLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYE---ALQD---MS 378
I G ET+++ L +A L + +IQ +L+ E+ D+ G +D +
Sbjct: 287 LFIGGTETTASTLSWAVAFLLHHPEIQRRLQE---EL-DRELGPGASCSRVTYKDRARLP 342
Query: 379 YLEMVLNETLRMHPSVARVDRHCTL------DYTLP-DTNIVIRAGESVNVPIMGLHYDP 431
L + E LR+ P V H T Y +P ++ N + G H D
Sbjct: 343 LLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIP------N--LQGAHLDE 394
Query: 432 KYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 470
+ P++F PDRFL L FG G R C+G
Sbjct: 395 TVWEQPHEFRPDRFLEPGANPS----ALAFGCGARVCLG 429
Score = 92.7 bits (231), Expect = 2e-20
Identities = 51/218 (23%), Positives = 83/218 (38%), Gaps = 37/218 (16%)
Query: 59 RRNDFLQLMV-EHQD--DSNAPSD--DVIKVKTVTVGENGETKQKVFLSEDTVTAQSILF 113
R+ ++ + H++ + D D + VG + L E V +
Sbjct: 231 NRDHMVEKQLRRHKESMVAGQWRDMTDYMLQG---VGRQRVEEGPGQLLEGHVHMSVVDL 287
Query: 114 LIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYE---ALQD---MSY 167
I G ET+++ L +A L + +IQ +L+ E+ D+ G +D +
Sbjct: 288 FIGGTETTASTLSWAVAFLLHHPEIQRRLQE---EL-DRELGPGASCSRVTYKDRARLPL 343
Query: 168 LEMVLNETLRMHPSVARVDRHCTL------DYTLP-DTNIVIRAGESVNVPIMGLHYDPK 220
L + E LR+ P V H T Y +P ++ N + G H D
Sbjct: 344 LNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIP------N--LQGAHLDET 395
Query: 221 YYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 258
+ P++F PDRFL L FG G R C+G
Sbjct: 396 VWEQPHEFRPDRFLEPGANPS----ALAFGCGARVCLG 429
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 91.5 bits (228), Expect = 5e-20
Identities = 57/255 (22%), Positives = 95/255 (37%), Gaps = 45/255 (17%)
Query: 21 FIPMFARFIPLSLFNSRVMEYLVALSKKVAHMRKTEGVRRNDFLQLMV-EHQD--DSNAP 77
P + +++ DFL ++ + P
Sbjct: 198 ASVFLYNAFP------WIGILPFGKHQQLFRNAA----VVYDFLSRLIEKASVNRKPQLP 247
Query: 78 SD--DVIKVKTVTVGENGETKQKVFLSEDTVTAQSI--LFLIAGYETSSTLLMFASYQLS 133
D + + G+ S++ + S+ L IAG ET++ +L +A ++
Sbjct: 248 QHFVDAYLDEM----DQGKNDPSSTFSKENL-IFSVGELI-IAGTETTTNVLRWAILFMA 301
Query: 134 LNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MSYLEMVLNETLRMHPSVARVDRHCT 190
L +IQ +++ EI D G + D M Y E VL+E LR V H T
Sbjct: 302 LYPNIQGQVQK---EI-DLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHAT 357
Query: 191 L------DYTLP-DTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSP 243
Y++P T ++ N + +H+D KY+ DP F P+RFL
Sbjct: 358 SEDAVVRGYSIPKGTTVIT------N--LYSVHFDEKYWRDPEVFHPERFLDSSGYFAKK 409
Query: 244 YVFLPFGAGPRNCIG 258
+PF G R+C+G
Sbjct: 410 EALVPFSLGRRHCLG 424
Score = 91.1 bits (227), Expect = 8e-20
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 35/218 (16%)
Query: 270 NKRNDFLQLMV-EHQD--DSNAPSD--DVIKVKTVTVGENGETKQKVFLSEDTVTAQSI- 323
DFL ++ + P D + + G+ S++ + S+
Sbjct: 225 AVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEM----DQGKNDPSSTFSKENL-IFSVG 279
Query: 324 -LFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MSY 379
L IAG ET++ +L +A ++L +IQ +++ EI D G + D M Y
Sbjct: 280 ELI-IAGTETTTNVLRWAILFMALYPNIQGQVQK---EI-DLIMGPNGKPSWDDKCKMPY 334
Query: 380 LEMVLNETLRMHPSVARVDRHCTL------DYTLP-DTNIVIRAGESVNVPIMGLHYDPK 432
E VL+E LR V H T Y++P T ++ N + +H+D K
Sbjct: 335 TEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVIT------N--LYSVHFDEK 386
Query: 433 YYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 470
Y+ DP F P+RFL +PF G R+C+G
Sbjct: 387 YWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLG 424
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 89.9 bits (224), Expect = 2e-19
Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 46/242 (19%)
Query: 38 VMEYLVALSKKVAHMRKTEGVRRNDFLQLMV-EHQ---DDSNAPSD--DVIKVKTVTVGE 91
V+ ++ AL+ KV +K L ++ EH+ D + P D + + E
Sbjct: 207 VLLHIPALAGKVLRFQK----AFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEM----E 258
Query: 92 NGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILD 151
+ + +++ + AG T+ST L + + L+ D+Q +++ EI D
Sbjct: 259 KAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQ---EI-D 314
Query: 152 KHGGKCTYEALQD---MSYLEMVLNETLRMHP----SVARVDRHCTL------DYTLP-D 197
G+ + D M Y V++E R V H T + +P
Sbjct: 315 DVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVT----HMTSRDIEVQGFRIPKG 370
Query: 198 TNIVIRAGESVNVPIMG-LHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNC 256
T ++ + + D + P++F P+ FL + P FLPF AG R C
Sbjct: 371 TTLI---------TNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRAC 421
Query: 257 IG 258
+G
Sbjct: 422 LG 423
Score = 88.8 bits (221), Expect = 4e-19
Identities = 47/222 (21%), Positives = 83/222 (37%), Gaps = 42/222 (18%)
Query: 270 NKRNDFLQLMV-EHQ---DDSNAPSD--DVIKVKTVTVGENGETKQKVFLSEDTVTAQSI 323
L ++ EH+ D + P D + + E + + +++ +
Sbjct: 223 KAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEM----EKAKGNPESSFNDENLRIVVA 278
Query: 324 LFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MSYL 380
AG T+ST L + + L+ D+Q +++ EI D G+ + D M Y
Sbjct: 279 DLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQ---EI-DDVIGQVRRPEMGDQAHMPYT 334
Query: 381 EMVLNETLRMHP----SVARVDRHCTL------DYTLP-DTNIVIRAGESVNVPIMG-LH 428
V++E R V H T + +P T ++ + +
Sbjct: 335 TAVIHEVQRFGDIVPLGVT----HMTSRDIEVQGFRIPKGTTLI---------TNLSSVL 381
Query: 429 YDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 470
D + P++F P+ FL + P FLPF AG R C+G
Sbjct: 382 KDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLG 423
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 83.4 bits (207), Expect = 2e-17
Identities = 64/258 (24%), Positives = 101/258 (39%), Gaps = 50/258 (19%)
Query: 17 MIIVFIPMFARFIPLSLFNSRVMEYLVALSKKVAHMRKTEGVRRNDFLQLMV-EHQD--D 73
+ P F ++P S +KV ++ V+ +++ V EH D
Sbjct: 195 QLYNNFPSFLHYLPGS-------------HRKV--IKNVAEVK--EYVSERVKEHHQSLD 237
Query: 74 SNAPSD--DVIKVKTVTVGENGETKQKVFLSEDTVTAQSIL-FLIAGYETSSTLLMFASY 130
N P D D + V+ + E + D + ++ AG ET+ST L +
Sbjct: 238 PNCPRDLTDCLLVEMEKEKHSAER----LYTMDGI-TVTVADLFFAGTETTSTTLRYGLL 292
Query: 131 QLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MSYLEMVLNETLRMHPSVARVDR 187
L +I++KL EI D+ G A++D M Y++ V++E R V
Sbjct: 293 ILMKYPEIEEKLHE---EI-DRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLP 348
Query: 188 HCT------LDYTLP-DTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAK 240
H Y +P T +V + + YD + +PDP KF P+ FL E
Sbjct: 349 HEATRDTIFRGYLIPKGTVVVP------T--LDSVLYDNQEFPDPEKFKPEHFLNENGKF 400
Query: 241 RSPYVFLPFGAGPRNCIG 258
+ F PF G R C G
Sbjct: 401 KYSDYFKPFSTGKRVCAG 418
Score = 82.2 bits (204), Expect = 6e-17
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 33/217 (15%)
Query: 270 NKRNDFLQLMV-EHQD--DSNAPSD--DVIKVKTVTVGENGETKQKVFLSEDTVTAQSIL 324
+ +++ V EH D N P D D + V+ + E + D + ++
Sbjct: 219 AEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAER----LYTMDGI-TVTVA 273
Query: 325 -FLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MSYL 380
AG ET+ST L + L +I++KL EI D+ G A++D M Y+
Sbjct: 274 DLFFAGTETTSTTLRYGLLILMKYPEIEEKLHE---EI-DRVIGPSRIPAIKDRQEMPYM 329
Query: 381 EMVLNETLRMHPSVARVDRHCT------LDYTLP-DTNIVIRAGESVNVPIMGLHYDPKY 433
+ V++E R V H Y +P T +V + + YD +
Sbjct: 330 DAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVP------T--LDSVLYDNQE 381
Query: 434 YPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 470
+PDP KF P+ FL E + F PF G R C G
Sbjct: 382 FPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAG 418
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 83.0 bits (206), Expect = 3e-17
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 24 MFARFIPLSLFNSRVMEYLVALSKKVAHMRKTEGVRRNDFLQLMV-EHQD--DSNAPSD- 79
+ F P+ ++Y K+ ++ ++ ++ V EHQ+ D N P D
Sbjct: 198 ICNNFSPI-------IDYFPGTHNKL--LKNVAFMK--SYILEKVKEHQESMDMNNPQDF 246
Query: 80 -DV--IKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNV 136
D +K++ + + F E LF AG ET+ST L +A L +
Sbjct: 247 IDCFLMKME-----KEKHNQPSEFTIESLENTAVDLF-GAGTETTSTTLRYALLLLLKHP 300
Query: 137 DIQDKLRAHVNEILDKHGGKCTYEALQD---MSYLEMVLNETLRMHP----SVARVDRHC 189
++ K++ EI ++ G+ +QD M Y + V++E R S+ H
Sbjct: 301 EVTAKVQE---EI-ERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLP----HA 352
Query: 190 T------LDYTLP-DTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRS 242
+Y +P T I+I + + + +D K +P+P FDP FL E +
Sbjct: 353 VTCDIKFRNYLIPKGTTILI------S--LTSVLHDNKEFPNPEMFDPHHFLDEGGNFKK 404
Query: 243 PYVFLPFGAGPRNCIG 258
F+PF AG R C+G
Sbjct: 405 SKYFMPFSAGKRICVG 420
Score = 81.1 bits (201), Expect = 1e-16
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 43/222 (19%)
Query: 270 NKRNDFLQLMV-EHQD--DSNAPSD--DV--IKVKTVTVGENGETKQKVFLSEDTVTAQS 322
++ V EHQ+ D N P D D +K++ + + F E
Sbjct: 221 AFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKME-----KEKHNQPSEFTIESLENTAV 275
Query: 323 ILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MSY 379
LF AG ET+ST L +A L + ++ K++ EI ++ G+ +QD M Y
Sbjct: 276 DLF-GAGTETTSTTLRYALLLLLKHPEVTAKVQE---EI-ERVIGRNRSPCMQDRSHMPY 330
Query: 380 LEMVLNETLRMHP----SVARVDRHCT------LDYTLP-DTNIVIRAGESVNVPIMGLH 428
+ V++E R S+ H +Y +P T I+I + + +
Sbjct: 331 TDAVVHEVQRYIDLLPTSLP----HAVTCDIKFRNYLIPKGTTILI------S--LTSVL 378
Query: 429 YDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 470
+D K +P+P FDP FL E + F+PF AG R C+G
Sbjct: 379 HDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVG 420
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 81.1 bits (201), Expect = 1e-16
Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 47/248 (18%)
Query: 33 LFN--SRVMEYLVALSKKVAHMRKTEGVRRNDFLQLMV-EHQD--DSNAPSD--DVIKVK 85
L+ S VM++L ++ + +G+ DF+ V +Q D N+P D D ++
Sbjct: 197 LYEMFSSVMKHLPGPQQQA--FQLLQGLE--DFIAKKVEHNQRTLDPNSPRDFIDSFLIR 252
Query: 86 TVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAH 145
+N T+ F ++ V LF I G ET ST L + L + +++ K+
Sbjct: 253 MQEEEKNPNTE---FYLKNLVMTTLNLF-IGGTETVSTTLRYGFLLLMKHPEVEAKVHE- 307
Query: 146 VNEILDKHGGKCTYEALQD---MSYLEMVLNETLRMHP----SVARVDRHCT------LD 192
EI D+ GK +D M Y+E V++E R S+A D
Sbjct: 308 --EI-DRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLA----RRVKKDTKFRD 360
Query: 193 YTLP-DTNIVIRAGESVNVPIMG-LHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFG 250
+ LP T + P++G + DP ++ +P F+P FL E+ + F+PF
Sbjct: 361 FFLPKGTEVY---------PMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFS 411
Query: 251 AGPRNCIG 258
G RNC G
Sbjct: 412 IGKRNCFG 419
Score = 79.5 bits (197), Expect = 4e-16
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 270 NKRNDFLQLMV-EHQD--DSNAPSD--DVIKVKTVTVGENGETKQKVFLSEDTVTAQSIL 324
DF+ V +Q D N+P D D ++ +N T+ F ++ V L
Sbjct: 220 QGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTE---FYLKNLVMTTLNL 276
Query: 325 FLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MSYLE 381
F I G ET ST L + L + +++ K+ EI D+ GK +D M Y+E
Sbjct: 277 F-IGGTETVSTTLRYGFLLLMKHPEVEAKVHE---EI-DRVIGKNRQPKFEDRAKMPYME 331
Query: 382 MVLNETLRMHP----SVARVDRHCT------LDYTLP-DTNIVIRAGESVNVPIMG-LHY 429
V++E R S+A D+ LP T + P++G +
Sbjct: 332 AVIHEIQRFGDVIPMSLA----RRVKKDTKFRDFFLPKGTEVY---------PMLGSVLR 378
Query: 430 DPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 470
DP ++ +P F+P FL E+ + F+PF G RNC G
Sbjct: 379 DPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFG 419
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 79.9 bits (198), Expect = 3e-16
Identities = 49/243 (20%), Positives = 94/243 (38%), Gaps = 37/243 (15%)
Query: 33 LFN--SRVMEYLVALSKKVAHMRKTEGVRRNDFLQLMV-EHQD--DSNAPSD--DVIKVK 85
+F S +++ +++ R + + F+ V +H+ D + P D DV ++
Sbjct: 197 VFELFSGFLKHFPGTHRQI--YRNLQEIN--TFIGQSVEKHRATLDPSNPRDFIDVYLLR 252
Query: 86 TVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAH 145
+ + + + AG ET+ST L + + + ++++
Sbjct: 253 MEKDKSDPSS----EFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQK- 307
Query: 146 VNEILDKHGGKCTYEALQD---MSYLEMVLNETLRMHPSVARVDRHCT------LDYTLP 196
EI ++ G AL D M Y + V++E R+ + H Y +P
Sbjct: 308 --EI-EQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIP 364
Query: 197 -DTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
+T + + +DP+Y+ P F+P FL A + F+PF G R
Sbjct: 365 KNTEVFP------V--LSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRI 416
Query: 256 CIG 258
C+G
Sbjct: 417 CLG 419
Score = 78.4 bits (194), Expect = 9e-16
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 23/157 (14%)
Query: 324 LFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQD---MSYL 380
LF AG ET+ST L + + + ++++ EI ++ G AL D M Y
Sbjct: 276 LF-FAGTETTSTTLRYGFLLMLKYPHVTERVQK---EI-EQVIGSHRPPALDDRAKMPYT 330
Query: 381 EMVLNETLRMHPSVARVDRHCT------LDYTLP-DTNIVIRAGESVNVPIMGLHYDPKY 433
+ V++E R+ + H Y +P +T + + +DP+Y
Sbjct: 331 DAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFP------V--LSSALHDPRY 382
Query: 434 YPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 470
+ P F+P FL A + F+PF G R C+G
Sbjct: 383 FETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLG 419
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 72.7 bits (179), Expect = 5e-14
Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 35/183 (19%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P DD+ + ++ G + D L G +T + ++ + L+ +
Sbjct: 200 QPGDDLFS-RILSEPVGGRP-----WTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARH 253
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
+ Q LR + +E +R +P+VA V R+ D
Sbjct: 254 PEDQRLLRE-------------------RPDLIPAAADELMRRYPTVA-VSRNAVADVDA 293
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
IR G+ V +P + + DP + P + DR +P G G
Sbjct: 294 DGV--TIRKGDLVYLPSVLHNLDPASFEAPEEVRFDR-------GLAPIRHTTMGVGAHR 344
Query: 256 CIG 258
C+G
Sbjct: 345 CVG 347
Score = 72.7 bits (179), Expect = 5e-14
Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 35/183 (19%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P DD+ + ++ G + D L G +T + ++ + L+ +
Sbjct: 200 QPGDDLFS-RILSEPVGGRP-----WTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARH 253
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
+ Q LR + +E +R +P+VA V R+ D
Sbjct: 254 PEDQRLLRE-------------------RPDLIPAAADELMRRYPTVA-VSRNAVADVDA 293
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
IR G+ V +P + + DP + P + DR +P G G
Sbjct: 294 DGV--TIRKGDLVYLPSVLHNLDPASFEAPEEVRFDR-------GLAPIRHTTMGVGAHR 344
Query: 468 CIG 470
C+G
Sbjct: 345 CVG 347
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 72.7 bits (179), Expect = 5e-14
Identities = 42/204 (20%), Positives = 68/204 (33%), Gaps = 49/204 (24%)
Query: 288 APSDDVIKVKT--VTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLS 345
P DD+I + V +G L ++ S L+AG+ T++ LL L
Sbjct: 207 DPGDDLI---SRLVLAEVDGRA-----LDDEEAANFSTALLLAGHITTTVLLGNIVRTLD 258
Query: 346 LNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDY 405
+ D D + ++ E LR P ++ R T
Sbjct: 259 EHPAHWDAAAE-------------------DPGRIPAIVEEVLRYRPPFPQMQRTTTKAT 299
Query: 406 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 465
+ I A VN ++ + D + DP +FDP R K L FG G
Sbjct: 300 EVAGV--PIPADVMVNTWVLSANRDSDAHDDPDRFDPSR-------KSGGAAQLSFGHGV 350
Query: 466 RNCIG-----------FKILVRRY 478
C+G + ++ R+
Sbjct: 351 HFCLGAPLARLENRVALEEIIARF 374
Score = 72.7 bits (179), Expect = 5e-14
Identities = 41/185 (22%), Positives = 63/185 (34%), Gaps = 38/185 (20%)
Query: 76 APSDDVIKVKT--VTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLS 133
P DD+I + V +G L ++ S L+AG+ T++ LL L
Sbjct: 207 DPGDDLI---SRLVLAEVDGRA-----LDDEEAANFSTALLLAGHITTTVLLGNIVRTLD 258
Query: 134 LNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDY 193
+ D D + ++ E LR P ++ R T
Sbjct: 259 EHPAHWDAAAE-------------------DPGRIPAIVEEVLRYRPPFPQMQRTTTKAT 299
Query: 194 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 253
+ I A VN ++ + D + DP +FDP R K L FG G
Sbjct: 300 EVAGV--PIPADVMVNTWVLSANRDSDAHDDPDRFDPSR-------KSGGAAQLSFGHGV 350
Query: 254 RNCIG 258
C+G
Sbjct: 351 HFCLG 355
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 72.3 bits (178), Expect = 6e-14
Identities = 44/204 (21%), Positives = 67/204 (32%), Gaps = 50/204 (24%)
Query: 288 APSDDVIKVKT--VTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLS 345
P D + + GE ++E A ++F G+ L+ +
Sbjct: 200 NPGDGLA---DSLLDAARAGE------ITESEAIATILVFYAVGHMAIGYLIASGIELFA 250
Query: 346 LNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDY 405
++ R D S ++NE +RM P R T D
Sbjct: 251 RRPEVFTAFRN-------------------DESARAAIINEMVRMDPPQLSFLRFPTEDV 291
Query: 406 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 465
+ +I AG + I + DP+ + DP FD R A R+ L FG GP
Sbjct: 292 EIGGV--LIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR---PPAASRN----LSFGLGP 342
Query: 466 RNCIG-----------FKILVRRY 478
+C G F +L RY
Sbjct: 343 HSCAGQIISRAEATTVFAVLAERY 366
Score = 71.9 bits (177), Expect = 9e-14
Identities = 40/185 (21%), Positives = 62/185 (33%), Gaps = 39/185 (21%)
Query: 76 APSDDVIKVKT--VTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLS 133
P D + + GE ++E A ++F G+ L+ +
Sbjct: 200 NPGDGLA---DSLLDAARAGE------ITESEAIATILVFYAVGHMAIGYLIASGIELFA 250
Query: 134 LNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDY 193
++ R D S ++NE +RM P R T D
Sbjct: 251 RRPEVFTAFRN-------------------DESARAAIINEMVRMDPPQLSFLRFPTEDV 291
Query: 194 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 253
+ +I AG + I + DP+ + DP FD R A R+ L FG GP
Sbjct: 292 EIGGV--LIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR---PPAASRN----LSFGLGP 342
Query: 254 RNCIG 258
+C G
Sbjct: 343 HSCAG 347
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 72.3 bits (178), Expect = 7e-14
Identities = 52/202 (25%), Positives = 77/202 (38%), Gaps = 47/202 (23%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P +D++ V V E+G+ L+ED + A L LIAG+ET+ L+ A+ +
Sbjct: 222 TPGEDLMS-GLVAVEESGDQ-----LTEDEIIATCNLLLIAGHETTVNLIANAALAMLRT 275
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
L A D S V+ ET+R P V V R+ D T+
Sbjct: 276 PGQWAALAA-------------------DGSRASAVIEETMRYDPPVQLVSRYAGDDLTI 316
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
+ G+++ + + H DP P +FDPDR R L FG G
Sbjct: 317 GTH--TVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR-----AQIRH----LGFGKGAHF 365
Query: 468 CIG-----------FKILVRRY 478
C+G L R+
Sbjct: 366 CLGAPLARLEATVALPALAARF 387
Score = 71.2 bits (175), Expect = 1e-13
Identities = 50/183 (27%), Positives = 74/183 (40%), Gaps = 36/183 (19%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P +D++ V V E+G+ L+ED + A L LIAG+ET+ L+ A+ +
Sbjct: 222 TPGEDLMS-GLVAVEESGDQ-----LTEDEIIATCNLLLIAGHETTVNLIANAALAMLRT 275
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
L A D S V+ ET+R P V V R+ D T+
Sbjct: 276 PGQWAALAA-------------------DGSRASAVIEETMRYDPPVQLVSRYAGDDLTI 316
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
+ G+++ + + H DP P +FDPDR R L FG G
Sbjct: 317 GTH--TVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR-----AQIRH----LGFGKGAHF 365
Query: 256 CIG 258
C+G
Sbjct: 366 CLG 368
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 72.4 bits (178), Expect = 7e-14
Identities = 43/186 (23%), Positives = 66/186 (35%), Gaps = 32/186 (17%)
Query: 76 APSDDVIKVKT--VTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLS 133
P D+I + T G LS+ + A + L+A E + L Y L
Sbjct: 235 NPGSDLI---SILCTSEYEGMA-----LSDKDILALILNVLLAATEPADKTLALMIYHLL 286
Query: 134 LNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDY 193
N + + + A D S + + ETLR P V + R + D
Sbjct: 287 NNPEQMNDVLA-------------------DRSLVPRAIAETLRYKPPVQLIPRQLSQDT 327
Query: 194 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDR-FLPEEKAKRSPYVFLPFGAG 252
+ I+ V I + DP+ + P F+ R L + A L FG+G
Sbjct: 328 VVGGM--EIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSG 385
Query: 253 PRNCIG 258
NC+G
Sbjct: 386 IHNCVG 391
Score = 72.4 bits (178), Expect = 7e-14
Identities = 43/186 (23%), Positives = 66/186 (35%), Gaps = 32/186 (17%)
Query: 288 APSDDVIKVKT--VTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLS 345
P D+I + T G LS+ + A + L+A E + L Y L
Sbjct: 235 NPGSDLI---SILCTSEYEGMA-----LSDKDILALILNVLLAATEPADKTLALMIYHLL 286
Query: 346 LNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDY 405
N + + + A D S + + ETLR P V + R + D
Sbjct: 287 NNPEQMNDVLA-------------------DRSLVPRAIAETLRYKPPVQLIPRQLSQDT 327
Query: 406 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDR-FLPEEKAKRSPYVFLPFGAG 464
+ I+ V I + DP+ + P F+ R L + A L FG+G
Sbjct: 328 VVGGM--EIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSG 385
Query: 465 PRNCIG 470
NC+G
Sbjct: 386 IHNCVG 391
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 70.0 bits (172), Expect = 3e-13
Identities = 35/183 (19%), Positives = 56/183 (30%), Gaps = 37/183 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P D I NG ++ D L L+ G +T L F+ L+ +
Sbjct: 215 KPGTDAIS-IVANGQVNGRP-----ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKS 268
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
+ + +L + E LR VA R T DY
Sbjct: 269 PEHRQELIE-------------------RPERIPAACEELLRRFSLVA-DGRILTSDYEF 308
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
++ G+ + +P M D + P D R ++ + FG G
Sbjct: 309 HGV--QLKKGDQILLPQMLSGLDERENACPMHVDFSR-------QKVSH--TTFGHGSHL 357
Query: 256 CIG 258
C+G
Sbjct: 358 CLG 360
Score = 70.0 bits (172), Expect = 3e-13
Identities = 35/183 (19%), Positives = 56/183 (30%), Gaps = 37/183 (20%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P D I NG ++ D L L+ G +T L F+ L+ +
Sbjct: 215 KPGTDAIS-IVANGQVNGRP-----ITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKS 268
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
+ + +L + E LR VA R T DY
Sbjct: 269 PEHRQELIE-------------------RPERIPAACEELLRRFSLVA-DGRILTSDYEF 308
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
++ G+ + +P M D + P D R ++ + FG G
Sbjct: 309 HGV--QLKKGDQILLPQMLSGLDERENACPMHVDFSR-------QKVSH--TTFGHGSHL 357
Query: 468 CIG 470
C+G
Sbjct: 358 CLG 360
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 69.2 bits (170), Expect = 7e-13
Identities = 42/184 (22%), Positives = 65/184 (35%), Gaps = 33/184 (17%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P DD+ ++ + + LS + + +L + AGYET+ ++ A + L
Sbjct: 205 TPGDDMT---SLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTR 261
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV-DRHCTLDYT 194
D +R V+ ETLR P+V + R+ D
Sbjct: 262 PDQLALVRK-------------------GEVTWADVVEETLRHEPAVKHLPLRYAVTDIA 302
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
LPD I GE + + P ++ D FD R K L FG G
Sbjct: 303 LPD-GRTIARGEPILASYAAANRHPDWHEDADTFDATR-----TVKEH----LAFGHGVH 352
Query: 255 NCIG 258
C+G
Sbjct: 353 FCLG 356
Score = 69.2 bits (170), Expect = 7e-13
Identities = 42/184 (22%), Positives = 65/184 (35%), Gaps = 33/184 (17%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P DD+ ++ + + LS + + +L + AGYET+ ++ A + L
Sbjct: 205 TPGDDMT---SLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTR 261
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV-DRHCTLDYT 406
D +R V+ ETLR P+V + R+ D
Sbjct: 262 PDQLALVRK-------------------GEVTWADVVEETLRHEPAVKHLPLRYAVTDIA 302
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
LPD I GE + + P ++ D FD R K L FG G
Sbjct: 303 LPD-GRTIARGEPILASYAAANRHPDWHEDADTFDATR-----TVKEH----LAFGHGVH 352
Query: 467 NCIG 470
C+G
Sbjct: 353 FCLG 356
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 68.8 bits (169), Expect = 8e-13
Identities = 45/202 (22%), Positives = 76/202 (37%), Gaps = 46/202 (22%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P DD++ + V ++ + + LS D +T+ +++ L+AG+E S +L+ +Y L +
Sbjct: 206 EPGDDLLS-ALIRVQDDDDGR----LSADELTSIALVLLLAGFEASVSLIGIGTYLLLTH 260
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
D +R D S L + E LR R + +
Sbjct: 261 PDQLALVRR-------------------DPSALPNAVEEILRYIAPPETTTRFAAEEVEI 301
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
I +V V + DPK +PDP++FD R + L FG G
Sbjct: 302 GGV--AIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-----DTRGH----LSFGQGIHF 350
Query: 468 CIG-----------FKILVRRY 478
C+G + L R+
Sbjct: 351 CMGRPLAKLEGEVALRALFGRF 372
Score = 68.8 bits (169), Expect = 9e-13
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P DD++ + V ++ + + LS D +T+ +++ L+AG+E S +L+ +Y L +
Sbjct: 206 EPGDDLLS-ALIRVQDDDDGR----LSADELTSIALVLLLAGFEASVSLIGIGTYLLLTH 260
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
D +R D S L + E LR R + +
Sbjct: 261 PDQLALVRR-------------------DPSALPNAVEEILRYIAPPETTTRFAAEEVEI 301
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
I +V V + DPK +PDP++FD R + L FG G
Sbjct: 302 GGV--AIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-----DTRGH----LSFGQGIHF 350
Query: 256 CIG 258
C+G
Sbjct: 351 CMG 353
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 68.9 bits (169), Expect = 9e-13
Identities = 39/183 (21%), Positives = 58/183 (31%), Gaps = 37/183 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
DD+I V NGE ++ D L L+ G +T L F L+ +
Sbjct: 221 GDGDDLIT-LMVNSEINGER-----IAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARH 274
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
++ +LR+ D L E R P V+ R D
Sbjct: 275 PELVAELRS-------------------DPLKLMRGAEEMFRRFPVVS-EARMVAKDQEY 314
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
++ G+ + +P D P+P+K D R FG GP
Sbjct: 315 KGV--FLKRGDMILLPTALHGLDDAANPEPWKLDFS---------RRSISHSTFGGGPHR 363
Query: 256 CIG 258
C G
Sbjct: 364 CAG 366
Score = 68.9 bits (169), Expect = 9e-13
Identities = 39/183 (21%), Positives = 58/183 (31%), Gaps = 37/183 (20%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
DD+I V NGE ++ D L L+ G +T L F L+ +
Sbjct: 221 GDGDDLIT-LMVNSEINGER-----IAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARH 274
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
++ +LR+ D L E R P V+ R D
Sbjct: 275 PELVAELRS-------------------DPLKLMRGAEEMFRRFPVVS-EARMVAKDQEY 314
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
++ G+ + +P D P+P+K D R FG GP
Sbjct: 315 KGV--FLKRGDMILLPTALHGLDDAANPEPWKLDFS---------RRSISHSTFGGGPHR 363
Query: 468 CIG 470
C G
Sbjct: 364 CAG 366
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 68.8 bits (169), Expect = 9e-13
Identities = 52/202 (25%), Positives = 79/202 (39%), Gaps = 47/202 (23%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P+DD++ V V+ +GE LS+D + +++L LI G ET+ L + QL N
Sbjct: 196 DPTDDLVSV-LVSSEVDGER-----LSDDELVMETLLILIGGDETTRHTLSGGTEQLLRN 249
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
D D L+ D S L + E LR V + R T D
Sbjct: 250 RDQWDLLQR-------------------DPSLLPGAIEEMLRWTAPVKNMCRVLTADTEF 290
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
T + AGE + + ++D + +P KFD R+P L FG G
Sbjct: 291 HGT--ALCAGEKMMLLFESANFDEAVFCEPEKFDVQ---------RNPNSHLAFGFGTHF 339
Query: 468 CIG-----------FKILVRRY 478
C+G + ++RR
Sbjct: 340 CLGNQLARLELSLMTERVLRRL 361
Score = 68.8 bits (169), Expect = 9e-13
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 36/184 (19%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P+DD++ V V+ +GE LS+D + +++L LI G ET+ L + QL N
Sbjct: 196 DPTDDLVSV-LVSSEVDGER-----LSDDELVMETLLILIGGDETTRHTLSGGTEQLLRN 249
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
D D L+ D S L + E LR V + R T D
Sbjct: 250 RDQWDLLQR-------------------DPSLLPGAIEEMLRWTAPVKNMCRVLTADTEF 290
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
T + AGE + + ++D + +P KFD R+P L FG G
Sbjct: 291 HGT--ALCAGEKMMLLFESANFDEAVFCEPEKFDVQ---------RNPNSHLAFGFGTHF 339
Query: 256 CIGN 259
C+GN
Sbjct: 340 CLGN 343
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 68.9 bits (169), Expect = 1e-12
Identities = 33/183 (18%), Positives = 62/183 (33%), Gaps = 37/183 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
D+I + + V +G+ + +D L L+ G +T L F LS +
Sbjct: 222 GSGTDLIT-RILNVEIDGKP-----MPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRH 275
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
+ ++R + L+ + E R V+ R+ D
Sbjct: 276 PETVAEMRR-------------------EPLKLQRGVEELFRRFAVVS-DARYVVSDMEF 315
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
T +++ G+ + +P D +++ DP D R + + F GP
Sbjct: 316 HGT--MLKEGDLILLPTALHGLDDRHHDDPMTVDLSR-------RDVTH--STFAQGPHR 364
Query: 256 CIG 258
C G
Sbjct: 365 CAG 367
Score = 68.9 bits (169), Expect = 1e-12
Identities = 33/183 (18%), Positives = 62/183 (33%), Gaps = 37/183 (20%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
D+I + + V +G+ + +D L L+ G +T L F LS +
Sbjct: 222 GSGTDLIT-RILNVEIDGKP-----MPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRH 275
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
+ ++R + L+ + E R V+ R+ D
Sbjct: 276 PETVAEMRR-------------------EPLKLQRGVEELFRRFAVVS-DARYVVSDMEF 315
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
T +++ G+ + +P D +++ DP D R + + F GP
Sbjct: 316 HGT--MLKEGDLILLPTALHGLDDRHHDDPMTVDLSR-------RDVTH--STFAQGPHR 364
Query: 468 CIG 470
C G
Sbjct: 365 CAG 367
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 68.8 bits (169), Expect = 1e-12
Identities = 43/202 (21%), Positives = 69/202 (34%), Gaps = 47/202 (23%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P D ++ E G+ L D V +++ L+AG+ET+ + + L +
Sbjct: 209 EPEDGLLDELIARQLEEGD------LDHDEVVMIALVLLVAGHETTVNAIALGALTLIQH 262
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
+ D L D + V+ E LR + R D +
Sbjct: 263 PEQIDVLLR-------------------DPGAVSGVVEELLRFTSVSDHIVRMAKEDIEV 303
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
I+AG++V V I ++ D K Y +P FD R A+ + FG G
Sbjct: 304 GGA--TIKAGDAVLVSITLMNRDAKAYENPDIFDARR-----NARHH----VGFGHGIHQ 352
Query: 468 CIG-----------FKILVRRY 478
C+G L R
Sbjct: 353 CLGQNLARAELEIALGGLFARI 374
Score = 68.4 bits (168), Expect = 1e-12
Identities = 41/183 (22%), Positives = 67/183 (36%), Gaps = 36/183 (19%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P D ++ E G+ L D V +++ L+AG+ET+ + + L +
Sbjct: 209 EPEDGLLDELIARQLEEGD------LDHDEVVMIALVLLVAGHETTVNAIALGALTLIQH 262
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
+ D L D + V+ E LR + R D +
Sbjct: 263 PEQIDVLLR-------------------DPGAVSGVVEELLRFTSVSDHIVRMAKEDIEV 303
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
I+AG++V V I ++ D K Y +P FD R A+ + FG G
Sbjct: 304 GGA--TIKAGDAVLVSITLMNRDAKAYENPDIFDARR-----NARHH----VGFGHGIHQ 352
Query: 256 CIG 258
C+G
Sbjct: 353 CLG 355
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 68.5 bits (168), Expect = 1e-12
Identities = 32/184 (17%), Positives = 61/184 (33%), Gaps = 39/184 (21%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P + +I V E G+ +++ + + ++AG + S ++ + +
Sbjct: 204 EPGEGMI---GAVVAEYGDD-----ATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRH 255
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 194
+ D R D + ++E +R R D T
Sbjct: 256 PEQIDAFRG-------------------DEQSAQRAVDELIRYLTVPYSPTPRIAREDLT 296
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
L I+ G+SV + + DP PD + D R + + FG G
Sbjct: 297 LAGQ--EIKKGDSVICSLPAANRDPALAPDVDRLDVTR-----EPIPH----VAFGHGVH 345
Query: 255 NCIG 258
+C+G
Sbjct: 346 HCLG 349
Score = 68.5 bits (168), Expect = 1e-12
Identities = 32/184 (17%), Positives = 61/184 (33%), Gaps = 39/184 (21%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P + +I V E G+ +++ + + ++AG + S ++ + +
Sbjct: 204 EPGEGMI---GAVVAEYGDD-----ATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRH 255
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 406
+ D R D + ++E +R R D T
Sbjct: 256 PEQIDAFRG-------------------DEQSAQRAVDELIRYLTVPYSPTPRIAREDLT 296
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
L I+ G+SV + + DP PD + D R + + FG G
Sbjct: 297 LAGQ--EIKKGDSVICSLPAANRDPALAPDVDRLDVTR-----EPIPH----VAFGHGVH 345
Query: 467 NCIG 470
+C+G
Sbjct: 346 HCLG 349
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 68.0 bits (167), Expect = 1e-12
Identities = 42/202 (20%), Positives = 67/202 (33%), Gaps = 48/202 (23%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P D+I + E + L+E+ + IL IAG+ET+ L+ + L +
Sbjct: 201 HPQQDMIS-MLLKGREKDK------LTEEEAASTCILLAIAGHETTVNLISNSVLCLLQH 253
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
+ KLR + + + E LR R + D +
Sbjct: 254 PEQLLKLRE-------------------NPDLIGTAVEECLRYESPTQMTARVASEDIDI 294
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
IR GE V + + + DP + +P FD R L FG G
Sbjct: 295 CGV--TIRQGEQVYLLLGAANRDPSIFTNPDVFDITR-----SPNPH----LSFGHGHHV 343
Query: 468 CIG-----------FKILVRRY 478
C+G L++R
Sbjct: 344 CLGSSLARLEAQIAINTLLQRM 365
Score = 67.3 bits (165), Expect = 3e-12
Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 37/183 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P D+I + E + L+E+ + IL IAG+ET+ L+ + L +
Sbjct: 201 HPQQDMIS-MLLKGREKDK------LTEEEAASTCILLAIAGHETTVNLISNSVLCLLQH 253
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
+ KLR + + + E LR R + D +
Sbjct: 254 PEQLLKLRE-------------------NPDLIGTAVEECLRYESPTQMTARVASEDIDI 294
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
IR GE V + + + DP + +P FD R L FG G
Sbjct: 295 CGV--TIRQGEQVYLLLGAANRDPSIFTNPDVFDITR-----SPNPH----LSFGHGHHV 343
Query: 256 CIG 258
C+G
Sbjct: 344 CLG 346
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 68.1 bits (167), Expect = 1e-12
Identities = 42/186 (22%), Positives = 66/186 (35%), Gaps = 37/186 (19%)
Query: 76 APSDDVI-KVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSL 134
P+DD I + VG +G+T ++ A + + G +T + +L + L
Sbjct: 214 EPADDAISHLVAAGVGADGDT-----AGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHR 268
Query: 135 NVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYT 194
D + L D + + E LR+ V + R T D T
Sbjct: 269 RPDQRRLLLD-------------------DPEGIPDAVEELLRLTSPVQGLARTTTRDVT 309
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDP-KYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 253
+ DT I AG V + + D +Y PD + D R P L F G
Sbjct: 310 IGDT--TIPAGRRVLLLYGSANRDERQYGPDAAELDVT---------RCPRNILTFSHGA 358
Query: 254 RNCIGN 259
+C+G
Sbjct: 359 HHCLGA 364
Score = 68.1 bits (167), Expect = 1e-12
Identities = 42/185 (22%), Positives = 66/185 (35%), Gaps = 37/185 (20%)
Query: 288 APSDDVI-KVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSL 346
P+DD I + VG +G+T ++ A + + G +T + +L + L
Sbjct: 214 EPADDAISHLVAAGVGADGDT-----AGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHR 268
Query: 347 NVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYT 406
D + L D + + E LR+ V + R T D T
Sbjct: 269 RPDQRRLLLD-------------------DPEGIPDAVEELLRLTSPVQGLARTTTRDVT 309
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDP-KYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 465
+ DT I AG V + + D +Y PD + D R P L F G
Sbjct: 310 IGDT--TIPAGRRVLLLYGSANRDERQYGPDAAELDVT---------RCPRNILTFSHGA 358
Query: 466 RNCIG 470
+C+G
Sbjct: 359 HHCLG 363
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 67.7 bits (166), Expect = 2e-12
Identities = 31/183 (16%), Positives = 69/183 (37%), Gaps = 37/183 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P +D++ + + +GE+ LSED + + L+ G + ++ L ++L+ +
Sbjct: 198 NPGNDIMS-RVIMSKIDGES-----LSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWD 251
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
++++ +L A + ++E LR + V R T + T+
Sbjct: 252 IELRRRLIA-------------------HPELIPNAVDELLRFYGPAM-VGRLVTQEVTV 291
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
D ++ G++ + D + P +R + + L G G
Sbjct: 292 GDI--TMKPGQTAMLWFPIASRDRSAFDSPDNIVIER-------TPNRH--LSLGHGIHR 340
Query: 256 CIG 258
C+G
Sbjct: 341 CLG 343
Score = 67.7 bits (166), Expect = 2e-12
Identities = 31/183 (16%), Positives = 69/183 (37%), Gaps = 37/183 (20%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P +D++ + + +GE+ LSED + + L+ G + ++ L ++L+ +
Sbjct: 198 NPGNDIMS-RVIMSKIDGES-----LSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWD 251
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
++++ +L A + ++E LR + V R T + T+
Sbjct: 252 IELRRRLIA-------------------HPELIPNAVDELLRFYGPAM-VGRLVTQEVTV 291
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
D ++ G++ + D + P +R + + L G G
Sbjct: 292 GDI--TMKPGQTAMLWFPIASRDRSAFDSPDNIVIER-------TPNRH--LSLGHGIHR 340
Query: 468 CIG 470
C+G
Sbjct: 341 CLG 343
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 67.6 bits (166), Expect = 2e-12
Identities = 40/203 (19%), Positives = 69/203 (33%), Gaps = 46/203 (22%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P DD+I K T + + + L L+AG T ++ L+ +
Sbjct: 206 EPKDDIIS-KLCTEQVKPGN-----IDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQH 259
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 406
D +L+A + S + E R H + A + R D
Sbjct: 260 PDQLAQLKA-------------------NPSLAPQFVEELCRYHTASALAIKRTAKEDVM 300
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
+ D ++RA E + + D + + +P +F+ +R K P L FG G
Sbjct: 301 IGDK--LVRANEGIIASNQSANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDH 351
Query: 467 NCIG-----------FKILVRRY 478
CI F L +++
Sbjct: 352 RCIAEHLAKAELTTVFSTLYQKF 374
Score = 67.6 bits (166), Expect = 2e-12
Identities = 38/184 (20%), Positives = 64/184 (34%), Gaps = 35/184 (19%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P DD+I K T + + + L L+AG T ++ L+ +
Sbjct: 206 EPKDDIIS-KLCTEQVKPGN-----IDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQH 259
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 194
D +L+A + S + E R H + A + R D
Sbjct: 260 PDQLAQLKA-------------------NPSLAPQFVEELCRYHTASALAIKRTAKEDVM 300
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
+ D ++RA E + + D + + +P +F+ +R K P L FG G
Sbjct: 301 IGDK--LVRANEGIIASNQSANRDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDH 351
Query: 255 NCIG 258
CI
Sbjct: 352 RCIA 355
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 67.7 bits (166), Expect = 2e-12
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 47/203 (23%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
+D++ T E+G L+ + + + + L+AG+ET+ L+ Y L +
Sbjct: 228 QDGEDLLSALVRTSDEDGSR-----LTSEELLGMAHILLVAGHETTVNLIANGMYALLSH 282
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 406
D LRA DM+ L+ + E LR V R
Sbjct: 283 PDQLAALRA-------------------DMTLLDGAVEEMLRYEGPVESATYRFPVEPVD 323
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
L T VI AG++V V + H P+ +PDP++FD R L FG G
Sbjct: 324 LDGT--VIPAGDTVLVVLADAHRTPERFPDPHRFDIRR-----DTAGH----LAFGHGIH 372
Query: 467 NCIG-----------FKILVRRY 478
CIG + L+ R
Sbjct: 373 FCIGAPLARLEARIAVRALLERC 395
Score = 67.7 bits (166), Expect = 2e-12
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 36/184 (19%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
+D++ T E+G L+ + + + + L+AG+ET+ L+ Y L +
Sbjct: 228 QDGEDLLSALVRTSDEDGSR-----LTSEELLGMAHILLVAGHETTVNLIANGMYALLSH 282
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 194
D LRA DM+ L+ + E LR V R
Sbjct: 283 PDQLAALRA-------------------DMTLLDGAVEEMLRYEGPVESATYRFPVEPVD 323
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
L T VI AG++V V + H P+ +PDP++FD R L FG G
Sbjct: 324 LDGT--VIPAGDTVLVVLADAHRTPERFPDPHRFDIRR-----DTAGH----LAFGHGIH 372
Query: 255 NCIG 258
CIG
Sbjct: 373 FCIG 376
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 67.7 bits (166), Expect = 2e-12
Identities = 47/204 (23%), Positives = 68/204 (33%), Gaps = 51/204 (25%)
Query: 288 APSDDVIKVKT--VTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLS 345
DD++ T V + G LS D + + L AG+ET++ L A L
Sbjct: 220 DDRDDLL---TLLVRARDTGSP-----LSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLR 271
Query: 346 LNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDY 405
+ D+ D+LR + E +R P V V R D
Sbjct: 272 AHRDVLDELRT-------------------TPESTPAAVEELMRYDPPVQAVTRWAYEDI 312
Query: 406 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 465
L D I G V + + DP +PDP D R A+R + FG G
Sbjct: 313 RLGDH--DIPRGSRVVALLGSANRDPARFPDPDVLDVHR-----AAERQ----VGFGLGI 361
Query: 466 RNCIG-----------FKILVRRY 478
C+G + L+
Sbjct: 362 HYCLGATLARAEAEIGLRALLDGI 385
Score = 66.5 bits (163), Expect = 4e-12
Identities = 46/185 (24%), Positives = 65/185 (35%), Gaps = 40/185 (21%)
Query: 76 APSDDVIKVKT--VTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLS 133
DD++ T V + G LS D + + L AG+ET++ L A L
Sbjct: 220 DDRDDLL---TLLVRARDTGSP-----LSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLR 271
Query: 134 LNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDY 193
+ D+ D+LR + E +R P V V R D
Sbjct: 272 AHRDVLDELRT-------------------TPESTPAAVEELMRYDPPVQAVTRWAYEDI 312
Query: 194 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 253
L D I G V + + DP +PDP D R A+R + FG G
Sbjct: 313 RLGDH--DIPRGSRVVALLGSANRDPARFPDPDVLDVHR-----AAERQ----VGFGLGI 361
Query: 254 RNCIG 258
C+G
Sbjct: 362 HYCLG 366
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 67.2 bits (165), Expect = 3e-12
Identities = 41/185 (22%), Positives = 66/185 (35%), Gaps = 41/185 (22%)
Query: 76 APSDDVIKVKT--VTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLS 133
+D++ + + G +S + + + + F+ G+ET ++ + A L
Sbjct: 200 EGGEDLL---ALMLDAHDRGL------MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLL 250
Query: 134 LNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDY 193
+ D D LR L + E LR PSV R +D
Sbjct: 251 AHPDQLDLLRR-------------------RPDLLAQAVEECLRYDPSVQSNTRQLDVDV 291
Query: 194 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 253
L +R + V V + DP+ Y P FD +R S + FGAG
Sbjct: 292 ELRGR--RLRRDDVVVVLAGAANRDPRRYDRPDDFDIER-----DPVPS----MSFGAGM 340
Query: 254 RNCIG 258
R C+G
Sbjct: 341 RYCLG 345
Score = 67.2 bits (165), Expect = 3e-12
Identities = 41/185 (22%), Positives = 66/185 (35%), Gaps = 41/185 (22%)
Query: 288 APSDDVIKVKT--VTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLS 345
+D++ + + G +S + + + + F+ G+ET ++ + A L
Sbjct: 200 EGGEDLL---ALMLDAHDRGL------MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLL 250
Query: 346 LNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDY 405
+ D D LR L + E LR PSV R +D
Sbjct: 251 AHPDQLDLLRR-------------------RPDLLAQAVEECLRYDPSVQSNTRQLDVDV 291
Query: 406 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 465
L +R + V V + DP+ Y P FD +R S + FGAG
Sbjct: 292 ELRGR--RLRRDDVVVVLAGAANRDPRRYDRPDDFDIER-----DPVPS----MSFGAGM 340
Query: 466 RNCIG 470
R C+G
Sbjct: 341 RYCLG 345
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 67.3 bits (165), Expect = 3e-12
Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 40/184 (21%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P DD++ + V + L+ D V LI G ET+ + A + L+
Sbjct: 224 EPGDDLV---STLV--TDDD-----LTIDDVLLNCDNVLIGGNETTRHAITGAVHALATV 273
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
+ LR + ++ V+ E LR V R T D T+
Sbjct: 274 PGLLTALRD-------------------GSADVDTVVEEVLRWTSPAMHVLRVTTADVTI 314
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
+ +G V + + DP + DP F P R P + FG G +
Sbjct: 315 NGR--DLPSGTPVVAWLPAANRDPAEFDDPDTFLPG---------RKPNRHITFGHGMHH 363
Query: 256 CIGN 259
C+G+
Sbjct: 364 CLGS 367
Score = 66.2 bits (162), Expect = 6e-12
Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 40/183 (21%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P DD++ + V + L+ D V LI G ET+ + A + L+
Sbjct: 224 EPGDDLV---STLV--TDDD-----LTIDDVLLNCDNVLIGGNETTRHAITGAVHALATV 273
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
+ LR + ++ V+ E LR V R T D T+
Sbjct: 274 PGLLTALRD-------------------GSADVDTVVEEVLRWTSPAMHVLRVTTADVTI 314
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
+ +G V + + DP + DP F P R P + FG G +
Sbjct: 315 NGR--DLPSGTPVVAWLPAANRDPAEFDDPDTFLPG---------RKPNRHITFGHGMHH 363
Query: 468 CIG 470
C+G
Sbjct: 364 CLG 366
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 67.3 bits (165), Expect = 3e-12
Identities = 44/203 (21%), Positives = 70/203 (34%), Gaps = 47/203 (23%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P D ++ E+G+ LS++ + A ++L LIAG+ET+ L+ L +
Sbjct: 201 EPDDALLSSLLAVSDEDGDR-----LSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTH 255
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 406
D + L D S + + E LR V++ R D T
Sbjct: 256 PDQRKLLAE-------------------DPSLISSAVEEFLRFDSPVSQAPIRFTAEDVT 296
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
I AGE V + + + D + P+P + D R A + FG G
Sbjct: 297 YSGV--TIPAGEMVMLGLAAANRDADWMPEPDRLDITR-----DASGG----VFFGHGIH 345
Query: 467 NCIG-----------FKILVRRY 478
C+G L
Sbjct: 346 FCLGAQLARLEGRVAIGRLFADR 368
Score = 67.3 bits (165), Expect = 3e-12
Identities = 43/184 (23%), Positives = 69/184 (37%), Gaps = 36/184 (19%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P D ++ E+G+ LS++ + A ++L LIAG+ET+ L+ L +
Sbjct: 201 EPDDALLSSLLAVSDEDGDR-----LSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTH 255
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 194
D + L D S + + E LR V++ R D T
Sbjct: 256 PDQRKLLAE-------------------DPSLISSAVEEFLRFDSPVSQAPIRFTAEDVT 296
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
I AGE V + + + D + P+P + D R A + FG G
Sbjct: 297 YSGV--TIPAGEMVMLGLAAANRDADWMPEPDRLDITR-----DASGG----VFFGHGIH 345
Query: 255 NCIG 258
C+G
Sbjct: 346 FCLG 349
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 66.9 bits (164), Expect = 4e-12
Identities = 36/183 (19%), Positives = 68/183 (37%), Gaps = 34/183 (18%)
Query: 77 PSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNV 136
+ ++ + + + +S++ + F AG ++ + L A L
Sbjct: 198 ITTGLMGELSRLRKDPAYSH----VSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP 253
Query: 137 DIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYTL 195
+++ L + + E LR++ S A + R T D +
Sbjct: 254 QLRNLLHE-------------------KPELIPAGVEELLRINLSFADGLPRLATADIQV 294
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
D ++R GE V V + G ++DP+++P+P + DR P L FG G
Sbjct: 295 GDV--LVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPTSH--------LAFGRGQHF 344
Query: 256 CIG 258
C G
Sbjct: 345 CPG 347
Score = 66.9 bits (164), Expect = 4e-12
Identities = 36/183 (19%), Positives = 68/183 (37%), Gaps = 34/183 (18%)
Query: 289 PSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNV 348
+ ++ + + + +S++ + F AG ++ + L A L
Sbjct: 198 ITTGLMGELSRLRKDPAYSH----VSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP 253
Query: 349 DIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYTL 407
+++ L + + E LR++ S A + R T D +
Sbjct: 254 QLRNLLHE-------------------KPELIPAGVEELLRINLSFADGLPRLATADIQV 294
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
D ++R GE V V + G ++DP+++P+P + DR P L FG G
Sbjct: 295 GDV--LVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPTSH--------LAFGRGQHF 344
Query: 468 CIG 470
C G
Sbjct: 345 CPG 347
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 66.5 bits (163), Expect = 5e-12
Identities = 36/184 (19%), Positives = 64/184 (34%), Gaps = 39/184 (21%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P D ++ + V ++G+ ++++ + ++ G ET + ++ F L N
Sbjct: 213 DPDDGLL---GMIVRDHGDN-----VTDEELKGLCTALILGGVETVAGMIGFGVLALLDN 264
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 194
+ L E V+NE +R V R D
Sbjct: 265 PGQIELLFE-------------------SPEKAERVVNELVRYLSPVQAPNPRLAIKDVV 305
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
+ +I+AG+ V I+ + D PDP D +R A + FG G
Sbjct: 306 IDGQ--LIKAGDYVLCSILMANRDEALTPDPDVLDANR-----AAVSD----VGFGHGIH 354
Query: 255 NCIG 258
C+G
Sbjct: 355 YCVG 358
Score = 66.5 bits (163), Expect = 5e-12
Identities = 36/184 (19%), Positives = 64/184 (34%), Gaps = 39/184 (21%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P D ++ + V ++G+ ++++ + ++ G ET + ++ F L N
Sbjct: 213 DPDDGLL---GMIVRDHGDN-----VTDEELKGLCTALILGGVETVAGMIGFGVLALLDN 264
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 406
+ L E V+NE +R V R D
Sbjct: 265 PGQIELLFE-------------------SPEKAERVVNELVRYLSPVQAPNPRLAIKDVV 305
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
+ +I+AG+ V I+ + D PDP D +R A + FG G
Sbjct: 306 IDGQ--LIKAGDYVLCSILMANRDEALTPDPDVLDANR-----AAVSD----VGFGHGIH 354
Query: 467 NCIG 470
C+G
Sbjct: 355 YCVG 358
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 66.1 bits (162), Expect = 7e-12
Identities = 40/203 (19%), Positives = 64/203 (31%), Gaps = 48/203 (23%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P DD+ V +G L + + L+AGYET++ L A Y + +
Sbjct: 220 EPGDDLTS-DIVRAFHDGV------LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQH 272
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 406
D K++ + + E LR P++ R D+
Sbjct: 273 PDQWMKIKE-------------------NPELAPQAVEEVLRWSPTLPVTATRVAAEDFE 313
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
+ I G V + H DP+ + D +FD + + FG GP
Sbjct: 314 VNGV--RIPTGTPVFMCAHVAHRDPRVFADADRFDITV--------KREAPSIAFGGGPH 363
Query: 467 NCIG-----------FKILVRRY 478
C+G L R
Sbjct: 364 FCLGTALARLELTEAVAALATRL 386
Score = 65.4 bits (160), Expect = 1e-11
Identities = 38/184 (20%), Positives = 62/184 (33%), Gaps = 37/184 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P DD+ V +G L + + L+AGYET++ L A Y + +
Sbjct: 220 EPGDDLTS-DIVRAFHDGV------LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQH 272
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 194
D K++ + + E LR P++ R D+
Sbjct: 273 PDQWMKIKE-------------------NPELAPQAVEEVLRWSPTLPVTATRVAAEDFE 313
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
+ I G V + H DP+ + D +FD + + FG GP
Sbjct: 314 VNGV--RIPTGTPVFMCAHVAHRDPRVFADADRFDITV--------KREAPSIAFGGGPH 363
Query: 255 NCIG 258
C+G
Sbjct: 364 FCLG 367
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 66.1 bits (162), Expect = 7e-12
Identities = 41/184 (22%), Positives = 68/184 (36%), Gaps = 37/184 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P DD+ + + G L + + + L L AG+ET++ ++ L +
Sbjct: 211 EPGDDLFSRQIARQRQEGT------LDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSH 264
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV-DRHCTLDYT 194
+ ++A + M + E LR V R T D
Sbjct: 265 PEQLTVVKA-------------------NPGRTPMAVEELLRYFTIADGVTSRLATEDVE 305
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
+ I+AGE V V ++ ++DP + DP D +R A+ L FG GP
Sbjct: 306 IGGV--SIKAGEGVIVSMLSANWDPAVFKDPAVLDVER-----GARHH----LAFGFGPH 354
Query: 255 NCIG 258
C+G
Sbjct: 355 QCLG 358
Score = 66.1 bits (162), Expect = 7e-12
Identities = 41/184 (22%), Positives = 68/184 (36%), Gaps = 37/184 (20%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P DD+ + + G L + + + L L AG+ET++ ++ L +
Sbjct: 211 EPGDDLFSRQIARQRQEGT------LDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSH 264
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV-DRHCTLDYT 406
+ ++A + M + E LR V R T D
Sbjct: 265 PEQLTVVKA-------------------NPGRTPMAVEELLRYFTIADGVTSRLATEDVE 305
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
+ I+AGE V V ++ ++DP + DP D +R A+ L FG GP
Sbjct: 306 IGGV--SIKAGEGVIVSMLSANWDPAVFKDPAVLDVER-----GARHH----LAFGFGPH 354
Query: 467 NCIG 470
C+G
Sbjct: 355 QCLG 358
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 65.3 bits (160), Expect = 1e-11
Identities = 44/203 (21%), Positives = 69/203 (33%), Gaps = 48/203 (23%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P DD+I T +G + + + + LIA ++T++ ++ + L +
Sbjct: 203 NPGDDLISALITTEDPDGV------VDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDS 256
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 406
D LR D S + + E LR +R T D
Sbjct: 257 PDQLALLRE-------------------DPSLVGNAVEELLRYLTIGQFGGERVATRDVE 297
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
L I GE V ++ +DP + +P +FD R + L FG G
Sbjct: 298 LGGV--RIAKGEQVVAHVLAADFDPAFVEEPERFDITR-----RPAPH----LAFGFGAH 346
Query: 467 NCIG-----------FKILVRRY 478
CIG F+ L RR
Sbjct: 347 QCIGQQLARIELQIVFETLFRRL 369
Score = 65.3 bits (160), Expect = 1e-11
Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 37/184 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P DD+I T +G + + + + LIA ++T++ ++ + L +
Sbjct: 203 NPGDDLISALITTEDPDGV------VDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDS 256
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 194
D LR D S + + E LR +R T D
Sbjct: 257 PDQLALLRE-------------------DPSLVGNAVEELLRYLTIGQFGGERVATRDVE 297
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
L I GE V ++ +DP + +P +FD R + L FG G
Sbjct: 298 LGGV--RIAKGEQVVAHVLAADFDPAFVEEPERFDITR-----RPAPH----LAFGFGAH 346
Query: 255 NCIG 258
CIG
Sbjct: 347 QCIG 350
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 65.3 bits (160), Expect = 1e-11
Identities = 36/203 (17%), Positives = 71/203 (34%), Gaps = 48/203 (23%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P DD+I G ++ + + + + + AG ET+++++ ++ L
Sbjct: 215 EPRDDLISKLVTDHLVPGN------VTTEQLLSTLGITINAGRETTTSMIALSTLLLLDR 268
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV-DRHCTLDYT 406
++ +LR D + ++E LR+ + R D
Sbjct: 269 PELPAELRK-------------------DPDLMPAAVDELLRVLSVADSIPLRVAAEDIE 309
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
L + A + V + G ++DP+ + DP + D R + FG G
Sbjct: 310 LSGR--TVPADDGVIALLAGANHDPEQFDDPERVDFHR-----TDNHH----VAFGYGVH 358
Query: 467 NCIG-----------FKILVRRY 478
C+G + L+RR
Sbjct: 359 QCVGQHLARLELEVALETLLRRV 381
Score = 65.0 bits (159), Expect = 1e-11
Identities = 33/184 (17%), Positives = 66/184 (35%), Gaps = 37/184 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P DD+I G ++ + + + + + AG ET+++++ ++ L
Sbjct: 215 EPRDDLISKLVTDHLVPGN------VTTEQLLSTLGITINAGRETTTSMIALSTLLLLDR 268
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV-DRHCTLDYT 194
++ +LR D + ++E LR+ + R D
Sbjct: 269 PELPAELRK-------------------DPDLMPAAVDELLRVLSVADSIPLRVAAEDIE 309
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
L + A + V + G ++DP+ + DP + D R + FG G
Sbjct: 310 LSGR--TVPADDGVIALLAGANHDPEQFDDPERVDFHR-----TDNHH----VAFGYGVH 358
Query: 255 NCIG 258
C+G
Sbjct: 359 QCVG 362
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 64.6 bits (158), Expect = 2e-11
Identities = 37/179 (20%), Positives = 62/179 (34%), Gaps = 43/179 (24%)
Query: 313 LSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYE 372
L+ED V ++ L AG ++ ++++ L+ + D + A
Sbjct: 226 LTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALA---------------- 269
Query: 373 ALQDMSYLEMVLNETLRMHPSVARV--DRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYD 430
D + + E LR + V R+ + D IRAG+ V + ++D
Sbjct: 270 ---DPDVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGV--TIRAGDLVLFDLGLPNFD 324
Query: 431 PKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG-----------FKILVRRY 478
+ + P +FD R L FG G +CIG F L R
Sbjct: 325 ERAFTGPEEFDAAR-----TPNPH----LTFGHGIWHCIGAPLARLELRTMFTKLFTRL 374
Score = 64.6 bits (158), Expect = 2e-11
Identities = 34/160 (21%), Positives = 59/160 (36%), Gaps = 32/160 (20%)
Query: 101 LSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYE 160
L+ED V ++ L AG ++ ++++ L+ + D + A
Sbjct: 226 LTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALA---------------- 269
Query: 161 ALQDMSYLEMVLNETLRMHPSVARV--DRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYD 218
D + + E LR + V R+ + D IRAG+ V + ++D
Sbjct: 270 ---DPDVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGV--TIRAGDLVLFDLGLPNFD 324
Query: 219 PKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 258
+ + P +FD R L FG G +CIG
Sbjct: 325 ERAFTGPEEFDAAR-----TPNPH----LTFGHGIWHCIG 355
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 64.7 bits (158), Expect = 2e-11
Identities = 40/184 (21%), Positives = 67/184 (36%), Gaps = 36/184 (19%)
Query: 77 PSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNV 136
DD+ V +GE LS + + IL ++AG ET+ + LS
Sbjct: 241 HHDDLTSS-LVEAEVDGER-----LSSREIASFFILLVVAGNETTRNAITHGVLALSRYP 294
Query: 137 DIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLP 196
+ +D+ + + + V E +R V + R T D L
Sbjct: 295 EQRDRWWSDFDGLAPT-----------------AV-EEIVRWASPVVYMRRTLTQDIELR 336
Query: 197 DTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYV-FLPFGAGPRN 255
T + AG+ V++ + D + DP+ FD R +P++ F G G
Sbjct: 337 GT--KMAAGDKVSLWYCSANRDESKFADPWTFDLAR-------NPNPHLGF--GGGGAHF 385
Query: 256 CIGN 259
C+G
Sbjct: 386 CLGA 389
Score = 63.9 bits (156), Expect = 4e-11
Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 36/183 (19%)
Query: 289 PSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNV 348
DD+ V +GE LS + + IL ++AG ET+ + LS
Sbjct: 241 HHDDLTSS-LVEAEVDGER-----LSSREIASFFILLVVAGNETTRNAITHGVLALSRYP 294
Query: 349 DIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLP 408
+ +D+ + + + V E +R V + R T D L
Sbjct: 295 EQRDRWWSDFDGLAPT-----------------AV-EEIVRWASPVVYMRRTLTQDIELR 336
Query: 409 DTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYV-FLPFGAGPRN 467
T + AG+ V++ + D + DP+ FD R +P++ F G G
Sbjct: 337 GT--KMAAGDKVSLWYCSANRDESKFADPWTFDLAR-------NPNPHLGF--GGGGAHF 385
Query: 468 CIG 470
C+G
Sbjct: 386 CLG 388
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 64.3 bits (157), Expect = 3e-11
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 36/184 (19%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P+DDV V +GE +S+ I+ AG++T+S A+ L+ +
Sbjct: 255 NPTDDVATV-IANAVVDGEP-----MSDRDTAGYYIITASAGHDTTSASSAGAALALARD 308
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
D+ +++A D + L ++ E +R V R D L
Sbjct: 309 PDLFARVKA-------------------DRNLLPGIVEEAIRWTTPVQHFMRTAATDTEL 349
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
I AG+ + + + ++DP +P+P KFDP R L FGAG
Sbjct: 350 CGQ--KIAAGDWLMLNYVAANHDPAQFPEPRKFDPT---------RPANRHLAFGAGSHQ 398
Query: 256 CIGN 259
C+G
Sbjct: 399 CLGL 402
Score = 63.1 bits (154), Expect = 6e-11
Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 36/183 (19%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P+DDV V +GE +S+ I+ AG++T+S A+ L+ +
Sbjct: 255 NPTDDVATV-IANAVVDGEP-----MSDRDTAGYYIITASAGHDTTSASSAGAALALARD 308
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
D+ +++A D + L ++ E +R V R D L
Sbjct: 309 PDLFARVKA-------------------DRNLLPGIVEEAIRWTTPVQHFMRTAATDTEL 349
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
I AG+ + + + ++DP +P+P KFDP R L FGAG
Sbjct: 350 CGQ--KIAAGDWLMLNYVAANHDPAQFPEPRKFDPT---------RPANRHLAFGAGSHQ 398
Query: 468 CIG 470
C+G
Sbjct: 399 CLG 401
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 64.2 bits (157), Expect = 3e-11
Identities = 44/204 (21%), Positives = 74/204 (36%), Gaps = 49/204 (24%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P+DD++ V + ++ LSE + +I L+AGYE+++T + Y L
Sbjct: 220 EPTDDLVS-ALVQARDQQDS-----LSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTR 273
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV--DRHCTLDY 405
+++ +L + + E R P R+ D
Sbjct: 274 PELRRQLLD-------------------RPELIPSAVEELTRWVPLGVGTAFPRYAVEDV 314
Query: 406 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 465
TL IRAGE V + D +PD + D DR + L FG G
Sbjct: 315 TLRGV--TIRAGEPVLASTGAANRDQAQFPDADRIDVDR-----TPNQH----LGFGHGV 363
Query: 466 RNCIG-----------FKILVRRY 478
+C+G ++L++R
Sbjct: 364 HHCLGAPLARVELQVALEVLLQRL 387
Score = 64.2 bits (157), Expect = 3e-11
Identities = 42/185 (22%), Positives = 68/185 (36%), Gaps = 38/185 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P+DD++ V + ++ LSE + +I L+AGYE+++T + Y L
Sbjct: 220 EPTDDLVS-ALVQARDQQDS-----LSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTR 273
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV--DRHCTLDY 193
+++ +L + + E R P R+ D
Sbjct: 274 PELRRQLLD-------------------RPELIPSAVEELTRWVPLGVGTAFPRYAVEDV 314
Query: 194 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 253
TL IRAGE V + D +PD + D DR + L FG G
Sbjct: 315 TLRGV--TIRAGEPVLASTGAANRDQAQFPDADRIDVDR-----TPNQH----LGFGHGV 363
Query: 254 RNCIG 258
+C+G
Sbjct: 364 HHCLG 368
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 64.2 bits (157), Expect = 3e-11
Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 37/185 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
AP DD+ + ENG+ L++ + + L + AG+ET+ +L++ A LS +
Sbjct: 208 APGDDLTS-ALIQASENGDH-----LTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTH 261
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 194
+ + + + + V+ ETLR + + R D
Sbjct: 262 PEQRALVLS-------------------GEAEWSAVVEETLRFSTPTSHVLIRFAAEDVP 302
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDP-KYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 253
+ D VI AG+++ V L D + P +FD R S + FG GP
Sbjct: 303 VGDR--VIPAGDALIVSYGALGRDERAHGPTADRFDLTR--------TSGNRHISFGHGP 352
Query: 254 RNCIG 258
C G
Sbjct: 353 HVCPG 357
Score = 64.2 bits (157), Expect = 3e-11
Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 37/185 (20%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
AP DD+ + ENG+ L++ + + L + AG+ET+ +L++ A LS +
Sbjct: 208 APGDDLTS-ALIQASENGDH-----LTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTH 261
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 406
+ + + + + V+ ETLR + + R D
Sbjct: 262 PEQRALVLS-------------------GEAEWSAVVEETLRFSTPTSHVLIRFAAEDVP 302
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDP-KYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 465
+ D VI AG+++ V L D + P +FD R S + FG GP
Sbjct: 303 VGDR--VIPAGDALIVSYGALGRDERAHGPTADRFDLTR--------TSGNRHISFGHGP 352
Query: 466 RNCIG 470
C G
Sbjct: 353 HVCPG 357
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 64.2 bits (157), Expect = 3e-11
Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 30/158 (18%)
Query: 101 LSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYE 160
++ + L AG +T+ + A Y L+ D +LRA
Sbjct: 236 ITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRA---------------- 279
Query: 161 ALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPK 220
D S E +R V R T D L I GE V + + + DP+
Sbjct: 280 ---DPSLARNAFEEAVRFESPVQTFFRTTTRDVELAGA--TIGEGEKVLMFLGSANRDPR 334
Query: 221 YYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 258
+ DP ++D R K S + + FG+G C+G
Sbjct: 335 RWDDPDRYDITR-------KTSGH--VGFGSGVHMCVG 363
Score = 64.2 bits (157), Expect = 3e-11
Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 30/158 (18%)
Query: 313 LSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYE 372
++ + L AG +T+ + A Y L+ D +LRA
Sbjct: 236 ITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRA---------------- 279
Query: 373 ALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPK 432
D S E +R V R T D L I GE V + + + DP+
Sbjct: 280 ---DPSLARNAFEEAVRFESPVQTFFRTTTRDVELAGA--TIGEGEKVLMFLGSANRDPR 334
Query: 433 YYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 470
+ DP ++D R K S + + FG+G C+G
Sbjct: 335 RWDDPDRYDITR-------KTSGH--VGFGSGVHMCVG 363
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 63.8 bits (156), Expect = 3e-11
Identities = 43/203 (21%), Positives = 69/203 (33%), Gaps = 48/203 (23%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P ++ V + + + + + + ++L LIAG+ET++++ + L +
Sbjct: 210 EPGAGLV---GALVADQLANGE---IDREELISTAMLLLIAGHETTASMTSLSVITLLDH 263
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 406
+ LRA D S + + E LR R T D
Sbjct: 264 PEQYAALRA-------------------DRSLVPGAVEELLRYLAIADIAGGRVATADIE 304
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
+ +IRAGE V V + D Y DP D R A+ L FG G
Sbjct: 305 VEGQ--LIRAGEGVIVVNSIANRDGTVYEDPDALDIHR-----SARHH----LAFGFGVH 353
Query: 467 NCIG-----------FKILVRRY 478
C+G L+ R
Sbjct: 354 QCLGQNLARLELEVILNALMDRV 376
Score = 63.8 bits (156), Expect = 4e-11
Identities = 41/184 (22%), Positives = 66/184 (35%), Gaps = 37/184 (20%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P ++ V + + + + + + ++L LIAG+ET++++ + L +
Sbjct: 210 EPGAGLV---GALVADQLANGE---IDREELISTAMLLLIAGHETTASMTSLSVITLLDH 263
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 194
+ LRA D S + + E LR R T D
Sbjct: 264 PEQYAALRA-------------------DRSLVPGAVEELLRYLAIADIAGGRVATADIE 304
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
+ +IRAGE V V + D Y DP D R A+ L FG G
Sbjct: 305 VEGQ--LIRAGEGVIVVNSIANRDGTVYEDPDALDIHR-----SARHH----LAFGFGVH 353
Query: 255 NCIG 258
C+G
Sbjct: 354 QCLG 357
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 63.9 bits (156), Expect = 4e-11
Identities = 34/186 (18%), Positives = 66/186 (35%), Gaps = 42/186 (22%)
Query: 77 PSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNV 136
P DDV+ + +G + + + A + AG++T+S+ A LS N
Sbjct: 234 PKDDVMSL-LANSKLDGNY-----IDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNP 287
Query: 137 DIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLP 196
+ ++ D + + +++E +R V R D +
Sbjct: 288 EQLALAKS-------------------DPALIPRLVDEAVRWTAPVKSFMRTALADTEVR 328
Query: 197 DTNIVIRAGESVNVPIMGL---HYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 253
I+ G+ + ++ + D + + +P +FD R P L FG G
Sbjct: 329 GQ--NIKRGDRI---MLSYPSANRDEEVFSNPDEFDIT---------RFPNRHLGFGWGA 374
Query: 254 RNCIGN 259
C+G
Sbjct: 375 HMCLGQ 380
Score = 62.7 bits (153), Expect = 8e-11
Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 42/185 (22%)
Query: 289 PSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNV 348
P DDV+ + +G + + + A + AG++T+S+ A LS N
Sbjct: 234 PKDDVMSL-LANSKLDGNY-----IDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNP 287
Query: 349 DIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLP 408
+ ++ D + + +++E +R V R D +
Sbjct: 288 EQLALAKS-------------------DPALIPRLVDEAVRWTAPVKSFMRTALADTEVR 328
Query: 409 DTNIVIRAGESVNVPIMGL---HYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 465
I+ G+ + ++ + D + + +P +FD R P L FG G
Sbjct: 329 GQ--NIKRGDRI---MLSYPSANRDEEVFSNPDEFDIT---------RFPNRHLGFGWGA 374
Query: 466 RNCIG 470
C+G
Sbjct: 375 HMCLG 379
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 63.8 bits (156), Expect = 4e-11
Identities = 36/178 (20%), Positives = 56/178 (31%), Gaps = 42/178 (23%)
Query: 313 LSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYE 372
LS + A + AG +T+ L+ FA L + + + ++A
Sbjct: 239 LSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKA---------------- 282
Query: 373 ALQDMSYLEMVLNETLRMHPSV-ARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDP 431
+ + L+E LR + R D I+ GE V + I D
Sbjct: 283 ---EPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGA--SIKKGEMVFLLIPSALRDG 337
Query: 432 KYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG-----------FKILVRRY 478
+ P FD R S L +G GP C G + RR+
Sbjct: 338 TVFSRPDVFDVRR-----DTSAS----LAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
Score = 63.0 bits (154), Expect = 7e-11
Identities = 34/159 (21%), Positives = 52/159 (32%), Gaps = 31/159 (19%)
Query: 101 LSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYE 160
LS + A + AG +T+ L+ FA L + + + ++A
Sbjct: 239 LSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKA---------------- 282
Query: 161 ALQDMSYLEMVLNETLRMHPSV-ARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDP 219
+ + L+E LR + R D I+ GE V + I D
Sbjct: 283 ---EPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGA--SIKKGEMVFLLIPSALRDG 337
Query: 220 KYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 258
+ P FD R S L +G GP C G
Sbjct: 338 TVFSRPDVFDVRR-----DTSAS----LAYGRGPHVCPG 367
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 63.5 bits (155), Expect = 4e-11
Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 41/167 (24%)
Query: 323 ILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEM 382
+ L AG E ++ ++ A +S + +++ D + +
Sbjct: 217 LRALFAGAEMTANTVVDAVLAVSAEPGLAERIAD-------------------DPAAAQR 257
Query: 383 VLNETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDP 442
+ E LR+HP++ R T + L + VI GE V V + + DP+ + +P + D
Sbjct: 258 TVAEVLRLHPALHLERRTATAEVRLGEH--VIGEGEEVVVVVAAANRDPEVFAEPDRLDV 315
Query: 443 DRFLPEEKAKRSPYVFLPFGAGPRNCIG-----------FKILVRRY 478
DR + +
Sbjct: 316 DR-----PDADR----ALSAHRGHPGRLEELVTALATAALRAAAKAL 353
Score = 63.5 bits (155), Expect = 4e-11
Identities = 27/148 (18%), Positives = 51/148 (34%), Gaps = 30/148 (20%)
Query: 111 ILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEM 170
+ L AG E ++ ++ A +S + +++ D + +
Sbjct: 217 LRALFAGAEMTANTVVDAVLAVSAEPGLAERIAD-------------------DPAAAQR 257
Query: 171 VLNETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDP 230
+ E LR+HP++ R T + L + VI GE V V + + DP+ + +P + D
Sbjct: 258 TVAEVLRLHPALHLERRTATAEVRLGEH--VIGEGEEVVVVVAAANRDPEVFAEPDRLDV 315
Query: 231 DRFLPEEKAKRSPYVFLPFGAGPRNCIG 258
DR
Sbjct: 316 DR-----PDADR----ALSAHRGHPGRL 334
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 63.8 bits (156), Expect = 4e-11
Identities = 37/188 (19%), Positives = 64/188 (34%), Gaps = 46/188 (24%)
Query: 77 PSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNV 136
P +D+I + + ++ + +L ++ G +T+ + L N
Sbjct: 233 PGNDLISM--LAHSPATRN-----MTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNP 285
Query: 137 DIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLP 196
D KL+A + + +E ++ E +R +A + R D L
Sbjct: 286 DQFAKLKA-------------------NPALVETMVPEIIRWQTPLAHMRRTAIADSELG 326
Query: 197 DTNIVIRAGESVNVPIMGLHY-----DPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGA 251
IR G+ V + Y D + P +F DR P L FG
Sbjct: 327 GK--TIRKGDKV-----VMWYYSGNRDDEVIDRPEEFIIDR--------PRPRQHLSFGF 371
Query: 252 GPRNCIGN 259
G C+GN
Sbjct: 372 GIHRCVGN 379
Score = 62.7 bits (153), Expect = 1e-10
Identities = 36/187 (19%), Positives = 63/187 (33%), Gaps = 46/187 (24%)
Query: 289 PSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNV 348
P +D+I + + ++ + +L ++ G +T+ + L N
Sbjct: 233 PGNDLISM--LAHSPATRN-----MTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNP 285
Query: 349 DIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLP 408
D KL+A + + +E ++ E +R +A + R D L
Sbjct: 286 DQFAKLKA-------------------NPALVETMVPEIIRWQTPLAHMRRTAIADSELG 326
Query: 409 DTNIVIRAGESVNVPIMGLHY-----DPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGA 463
IR G+ V + Y D + P +F DR P L FG
Sbjct: 327 GK--TIRKGDKV-----VMWYYSGNRDDEVIDRPEEFIIDR--------PRPRQHLSFGF 371
Query: 464 GPRNCIG 470
G C+G
Sbjct: 372 GIHRCVG 378
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 63.4 bits (155), Expect = 5e-11
Identities = 48/184 (26%), Positives = 66/184 (35%), Gaps = 44/184 (23%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
D+ N LSE IL +IAG ET++ L+ A +L
Sbjct: 181 KEIVDLT---GKIANSN--------LSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLY 229
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
+ D +R + L+ V E LR P V R R +
Sbjct: 230 -NSWDYVRE-------------------KGA-LKAV-EEALRFSPPVMRTIRVTKEKVKI 267
Query: 196 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 255
D VI GE V V I + D + + DP F PDR +P+ L FG+G
Sbjct: 268 RDQ--VIDEGELVRVWIASANRDEEVFKDPDSFIPDR-------TPNPH--LSFGSGIHL 316
Query: 256 CIGN 259
C+G
Sbjct: 317 CLGA 320
Score = 62.2 bits (152), Expect = 1e-10
Identities = 48/183 (26%), Positives = 66/183 (36%), Gaps = 44/183 (24%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
D+ N LSE IL +IAG ET++ L+ A +L
Sbjct: 181 KEIVDLT---GKIANSN--------LSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLY 229
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 407
+ D +R + L+ V E LR P V R R +
Sbjct: 230 -NSWDYVRE-------------------KGA-LKAV-EEALRFSPPVMRTIRVTKEKVKI 267
Query: 408 PDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPRN 467
D VI GE V V I + D + + DP F PDR +P+ L FG+G
Sbjct: 268 RDQ--VIDEGELVRVWIASANRDEEVFKDPDSFIPDR-------TPNPH--LSFGSGIHL 316
Query: 468 CIG 470
C+G
Sbjct: 317 CLG 319
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 63.0 bits (154), Expect = 6e-11
Identities = 35/185 (18%), Positives = 62/185 (33%), Gaps = 41/185 (22%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
+ S +I L+ D +L +I G ET++ L+ + N
Sbjct: 154 SDSHGIIN-VLAGSSLKNRK-----LTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDEN 207
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVD-RHCTLDYT 194
DI D + + ++ ETLR + + + R D
Sbjct: 208 PDIIDDALKNRSGFVE----------------------ETLRYYSPIQFLPHRFAAEDSY 245
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
+ + I+ G+ V V + + D ++ +P F R R + L FG G
Sbjct: 246 INNK--KIKKGDQVIVYLGSANRDETFFDEPDLFKIGR--------REMH--LAFGIGIH 293
Query: 255 NCIGN 259
C+G
Sbjct: 294 MCLGA 298
Score = 62.2 bits (152), Expect = 9e-11
Identities = 39/210 (18%), Positives = 68/210 (32%), Gaps = 42/210 (20%)
Query: 263 IFSEMSENKRNDFLQLMVEHQDD-SNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQ 321
I + N MV + + S +I L+ D
Sbjct: 128 IIGNKRDENFNYVNNRMVSRLLEIFKSDSHGIIN-VLAGSSLKNRK-----LTMDEKIKY 181
Query: 322 SILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLE 381
+L +I G ET++ L+ + N DI D + + ++
Sbjct: 182 IMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNRSGFVE------------------ 223
Query: 382 MVLNETLRMHPSVARVD-RHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKF 440
ETLR + + + R D + + I+ G+ V V + + D ++ +P F
Sbjct: 224 ----ETLRYYSPIQFLPHRFAAEDSYINNK--KIKKGDQVIVYLGSANRDETFFDEPDLF 277
Query: 441 DPDRFLPEEKAKRSPYVFLPFGAGPRNCIG 470
R R + L FG G C+G
Sbjct: 278 KIGR--------REMH--LAFGIGIHMCLG 297
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 63.7 bits (154), Expect = 9e-11
Identities = 90/571 (15%), Positives = 163/571 (28%), Gaps = 148/571 (25%)
Query: 10 YKRVILFMIIVFIPMFAR-F-------IPLSLFNSRVMEYLVALSKKVAHMRK------- 54
YK ++ VF F F +P S+ + +++++ V+ +
Sbjct: 18 YKDILS----VFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLS 73
Query: 55 --TEGVRR--NDFLQ-----LMVEHQDDSNAPSDD------------------------- 80
E V++ + L+ LM + + PS
Sbjct: 74 KQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR 133
Query: 81 ---VIKVKT----------VTV-GENGETKQ----KVFLSEDTVTAQS--ILFLIAGYET 120
+K++ V + G G K V LS I +L
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 121 SSTLLMFA----SYQLSLN----VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVL 172
S ++ YQ+ N D ++ ++ I + L+ Y +L
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE-----LRRLLKSKPYENCLL 248
Query: 173 NETLR--MHPSVARV-DRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYK-- 227
L + + C + T + + I H+ PD K
Sbjct: 249 --VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 228 F------DPDRFLPEEKAKRSPYVFLPFGAGPRNCIGNTTWIFSEMSENKR-NDFLQLMV 280
P LP E +P R+ G TW + + ++ +
Sbjct: 307 LLKYLDCRPQD-LPREVLTTNPRRLSIIAESIRD--GLATWDNWKHVNCDKLTTIIESSL 363
Query: 281 EHQDDSNA----------PSDDV-IKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAG 329
+ + P I +++ K V + + + S L+
Sbjct: 364 NVLEPAEYRKMFDRLSVFP-PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS---LVEK 419
Query: 330 YETSSTL-LMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMS--YLEMVLNE 386
ST+ + S L L V ++++ H I+D + T++ D+ YL+
Sbjct: 420 QPKESTISIP--SIYLELKVKLENEYALH-RSIVDHYNIPKTFD-SDDLIPPYLDQYFYS 475
Query: 387 TLRMHPSVARVD------RHCTLDYTLPDTNIVIRAGESVNVP--IMGLHYDPKYYPDPY 438
+ H R LD+ + I + N I+ K+Y Y
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI-RHDSTAWNASGSILNTLQQLKFYKP-Y 533
Query: 439 KFDPD-----------RFLP--EEKAKRSPY 456
D D FLP EE S Y
Sbjct: 534 ICDNDPKYERLVNAILDFLPKIEENLICSKY 564
Score = 42.9 bits (100), Expect = 2e-04
Identities = 56/361 (15%), Positives = 104/361 (28%), Gaps = 88/361 (24%)
Query: 137 DIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLP 196
D+QD + IL K ++ + +V+ R L +TL
Sbjct: 37 DVQDMPK----SILSKE-----------------EIDHIIMSKDAVSGTLR---LFWTLL 72
Query: 197 D--TNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
+V + E V L + YKF E++ R
Sbjct: 73 SKQEEMVQKFVEEV------LRIN-------YKFLMSPIKTEQRQPSMMTRMY---IEQR 116
Query: 255 NCIGNTTWIFSEMSENKRNDFLQLMVEHQDDSNAPSDDVIKV-------KTVTVGENGET 307
+ + N +F++ + ++ +L+L + P+ +V+ + KT +
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELR--PAKNVL-IDGVLGSGKTWVALD---- 169
Query: 308 KQKVFLSEDTVTAQS--ILFLIAGYETSSTLLMFA----SYQLSLN----VDIQDKLRAH 357
V LS I +L S ++ YQ+ N D ++
Sbjct: 170 ---VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR 226
Query: 358 VNEILDKHGGKCTYEALQDMSYLEMVLNETLR--MHPSVARV-DRHCTLDYTLPDTNIVI 414
++ I + L+ Y +L L + + C + T +
Sbjct: 227 IHSIQAE-----LRRLLKSKPYENCLL--VLLNVQNAKAWNAFNLSCKILLTTRFKQVTD 279
Query: 415 RAGESVNVPIMGLHYDPKYYPDPYK--F------DPDRFLPEEKAKRSPYVFLPFGAGPR 466
+ I H+ PD K P LP E +P R
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD-LPREVLTTNPRRLSIIAESIR 338
Query: 467 N 467
+
Sbjct: 339 D 339
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 61.4 bits (150), Expect = 2e-10
Identities = 45/193 (23%), Positives = 70/193 (36%), Gaps = 43/193 (22%)
Query: 67 MVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLM 126
++ + D +V+ + V N LS+ IL LIAG ET++ L+
Sbjct: 171 LIGYVKDHLNSGTEVV---SRVVNSN--------LSDIEKLGYIILLLIAGNETTTNLIS 219
Query: 127 FASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVD 186
+ + ++ ++R + + E LR P V R
Sbjct: 220 NSVIDFTRF-NLWQRIREE--------------------NLYLKAIEEALRYSPPVMRTV 258
Query: 187 RHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVF 246
R L D I GE V V I + D + + D KF PDR +P+
Sbjct: 259 RKTKERVKLGDQ--TIEEGEYVRVWIASANRDEEVFHDGEKFIPDR-------NPNPH-- 307
Query: 247 LPFGAGPRNCIGN 259
L FG+G C+G
Sbjct: 308 LSFGSGIHLCLGA 320
Score = 60.3 bits (147), Expect = 4e-10
Identities = 45/192 (23%), Positives = 70/192 (36%), Gaps = 43/192 (22%)
Query: 279 MVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLM 338
++ + D +V+ + V N LS+ IL LIAG ET++ L+
Sbjct: 171 LIGYVKDHLNSGTEVV---SRVVNSN--------LSDIEKLGYIILLLIAGNETTTNLIS 219
Query: 339 FASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVD 398
+ + ++ ++R + + E LR P V R
Sbjct: 220 NSVIDFTRF-NLWQRIREE--------------------NLYLKAIEEALRYSPPVMRTV 258
Query: 399 RHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVF 458
R L D I GE V V I + D + + D KF PDR +P+
Sbjct: 259 RKTKERVKLGDQ--TIEEGEYVRVWIASANRDEEVFHDGEKFIPDR-------NPNPH-- 307
Query: 459 LPFGAGPRNCIG 470
L FG+G C+G
Sbjct: 308 LSFGSGIHLCLG 319
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 61.1 bits (149), Expect = 3e-10
Identities = 39/204 (19%), Positives = 56/204 (27%), Gaps = 51/204 (25%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
+ DV GE + E + I G + + Y L
Sbjct: 212 SEGGDVYS-MLGAAVGRGE------VGETEAVGLAGPLQIGGEAVTHNVGQML-YLLLTR 263
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV--DRHCTLDY 405
++ ++R L+E LR V R D
Sbjct: 264 RELMARMRE-------------------RPGARGTALDELLRWISHRTSVGLARIALEDV 304
Query: 406 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 465
+ T I AGE V V + + DP +PDP + D DR L +G G
Sbjct: 305 EVHGT--RIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR-----DPNPH----LAYGNGH 353
Query: 466 RNCIG-----------FKILVRRY 478
C G L+ R
Sbjct: 354 HFCTGAVLARMQTELLVDTLLERL 377
Score = 60.7 bits (148), Expect = 3e-10
Identities = 37/185 (20%), Positives = 53/185 (28%), Gaps = 40/185 (21%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
+ DV GE + E + I G + + Y L
Sbjct: 212 SEGGDVYS-MLGAAVGRGE------VGETEAVGLAGPLQIGGEAVTHNVGQML-YLLLTR 263
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV--DRHCTLDY 193
++ ++R L+E LR V R D
Sbjct: 264 RELMARMRE-------------------RPGARGTALDELLRWISHRTSVGLARIALEDV 304
Query: 194 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 253
+ T I AGE V V + + DP +PDP + D DR L +G G
Sbjct: 305 EVHGT--RIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR-----DPNPH----LAYGNGH 353
Query: 254 RNCIG 258
C G
Sbjct: 354 HFCTG 358
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 58.0 bits (141), Expect = 2e-09
Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 51/204 (25%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
+ +DV ++ G + ++ ++L I G ++ + L
Sbjct: 209 SAGEDVT---SLLGAAVGRDE----ITLSEAVGLAVLLQIGGEAVTN-NSGQMFHLLLSR 260
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV--DRHCTLDY 405
++ ++LR+ + ++E LR P V R D
Sbjct: 261 PELAERLRS-------------------EPEIRPRAIDELLRWIPHRNAVGLSRIALEDV 301
Query: 406 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 465
+ IRAG++V V + + DP+ +PDP + D +R + FG GP
Sbjct: 302 EIKGV--RIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-----SPNPH----VSFGFGP 350
Query: 466 RNCIG-----------FKILVRRY 478
C G ++ R
Sbjct: 351 HYCPGGMLARLESELLVDAVLDRV 374
Score = 58.0 bits (141), Expect = 3e-09
Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 40/185 (21%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
+ +DV ++ G + ++ ++L I G ++ + L
Sbjct: 209 SAGEDVT---SLLGAAVGRDE----ITLSEAVGLAVLLQIGGEAVTN-NSGQMFHLLLSR 260
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARV--DRHCTLDY 193
++ ++LR+ + ++E LR P V R D
Sbjct: 261 PELAERLRS-------------------EPEIRPRAIDELLRWIPHRNAVGLSRIALEDV 301
Query: 194 TLPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGP 253
+ IRAG++V V + + DP+ +PDP + D +R + FG GP
Sbjct: 302 EIKGV--RIRAGDAVYVSYLAANRDPEVFPDPDRIDFER-----SPNPH----VSFGFGP 350
Query: 254 RNCIG 258
C G
Sbjct: 351 HYCPG 355
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 56.5 bits (137), Expect = 7e-09
Identities = 37/184 (20%), Positives = 58/184 (31%), Gaps = 44/184 (23%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P D +I V V E+G +S++ + + LI E + L A L +
Sbjct: 194 DPGDGMI---GVIVREHGAE-----ISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTH 245
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 194
D LR ++ E LR V R D
Sbjct: 246 PDQMALLRE-------------------KPELIDSATEEVLRHASIVEAPAPRVALADVR 286
Query: 195 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 254
+ I AG+ + ++ + P D +FD R + + FG G
Sbjct: 287 MAGR--DIHAGDVLTCSMLATNRAP---GD--RFDITR-----EKATH----MAFGHGIH 330
Query: 255 NCIG 258
+CIG
Sbjct: 331 HCIG 334
Score = 56.5 bits (137), Expect = 7e-09
Identities = 37/184 (20%), Positives = 58/184 (31%), Gaps = 44/184 (23%)
Query: 288 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 347
P D +I V V E+G +S++ + + LI E + L A L +
Sbjct: 194 DPGDGMI---GVIVREHGAE-----ISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTH 245
Query: 348 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVAR-VDRHCTLDYT 406
D LR ++ E LR V R D
Sbjct: 246 PDQMALLRE-------------------KPELIDSATEEVLRHASIVEAPAPRVALADVR 286
Query: 407 LPDTNIVIRAGESVNVPIMGLHYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPFGAGPR 466
+ I AG+ + ++ + P D +FD R + + FG G
Sbjct: 287 MAGR--DIHAGDVLTCSMLATNRAP---GD--RFDITR-----EKATH----MAFGHGIH 330
Query: 467 NCIG 470
+CIG
Sbjct: 331 HCIG 334
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 55.4 bits (134), Expect = 2e-08
Identities = 36/188 (19%), Positives = 65/188 (34%), Gaps = 45/188 (23%)
Query: 76 APSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLN 135
P+DD++ + +GE LS+D ++ +AG ET+ + + +
Sbjct: 234 NPADDIVTQ-LIQADIDGEK-----LSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEH 287
Query: 136 VDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTL 195
D + + + +E +R V R DY L
Sbjct: 288 PDQWELYKK---VRPET-----------------AA-DEIVRWATPVTAFQRTALRDYEL 326
Query: 196 PDTNIVIRAGESVNVPIMGL---HYDPKYYPDPYKFDPDRFLPEEKAKRSPYVFLPF-GA 251
I+ G+ V +M ++D + + DP+ F+ R+P + F G
Sbjct: 327 SGV--QIKKGQRV---VMFYRSANFDEEVFQDPFTFNIL---------RNPNPHVGFGGT 372
Query: 252 GPRNCIGN 259
G CIG
Sbjct: 373 GAHYCIGA 380
Score = 55.0 bits (133), Expect = 3e-08
Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 49/184 (26%)
Query: 264 FSEMSENKRNDFLQLMVEHQDDSNAPSDDVIKVKTVTVGENGETKQKVFLSEDTVTAQSI 323
+M+E K + P+DD++ + +GE LS+D +
Sbjct: 224 AMKMAEEKAKN--------------PADDIVTQ-LIQADIDGEK-----LSDDEFGFFVV 263
Query: 324 LFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMV 383
+ +AG ET+ + + + D + + +
Sbjct: 264 MLAVAGNETTRNSITQGMMAFAEHPDQWELYKK---VRPET-----------------AA 303
Query: 384 LNETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGL---HYDPKYYPDPYKF 440
+E +R V R DY L I+ G+ V +M ++D + + DP+ F
Sbjct: 304 -DEIVRWATPVTAFQRTALRDYELSGV--QIKKGQRV---VMFYRSANFDEEVFQDPFTF 357
Query: 441 DPDR 444
+ R
Sbjct: 358 NILR 361
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 44.3 bits (104), Expect = 8e-05
Identities = 78/473 (16%), Positives = 124/473 (26%), Gaps = 218/473 (46%)
Query: 114 LIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLN 173
A E ++ + + L +V+ +++ + Q L + L
Sbjct: 48 FAADDEPTTPAELVGKF-LG-----------YVSSLVEPS------KVGQFDQVLNLCLT 89
Query: 174 E----TLR---MHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVPIMGLHYDPKYY---- 222
E L +H A++ + D TL T +I+ Y
Sbjct: 90 EFENCYLEGNDIHALAAKLLQE--NDTTLVKTKELIKN----------------YITARI 131
Query: 223 --PDPY-KFDPDRFL---PEEKAKRSPYVFLPFGAGPRNCIGNTTWIFSEMSE------N 270
P+ K E A+ + FG G GNT F E+ +
Sbjct: 132 MAKRPFDKKSNSALFRAVGEGNAQ----LVAIFG-GQ----GNTDDYFEELRDLYQTYHV 182
Query: 271 KRNDFLQLMVEH-------------------------QDDSNAPSDD------------- 292
D ++ E ++ SN P D
Sbjct: 183 LVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIG 242
Query: 293 ---------VIKVKTVTVGE-----NGETKQKVFLSEDTVTAQSI--------------- 323
K+ T GE G T S+ VTA +I
Sbjct: 243 VIQLAHYVVTAKLLGFTPGELRSYLKGATGH----SQGLVTAVAIAETDSWESFFVSVRK 298
Query: 324 ----LFLIAGYE-------TSSTLLMFA----------SYQLSLNVDIQDKLRAHVNEIL 362
LF I G TS + S LS I + + V + +
Sbjct: 299 AITVLFFI-GVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLS----ISNLTQEQVQDYV 353
Query: 363 DKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLPDTNIVIRAG----- 417
+K N L P+ +V +L N+V+ +G
Sbjct: 354 NK-------------------TNSHL---PAGKQV--EISL-VNGAK-NLVV-SGPPQSL 386
Query: 418 ESVNVPIMGLHYDPKYYPD----PY-----KFDPDRFLPEEKAKRSPYVFLPF 461
+N+ + D P+ KF +RFLP V PF
Sbjct: 387 YGLNLTLRKAKAPSG--LDQSRIPFSERKLKFS-NRFLP---------VASPF 427
Score = 33.5 bits (76), Expect = 0.22
Identities = 58/300 (19%), Positives = 88/300 (29%), Gaps = 124/300 (41%)
Query: 23 PMFARFIPLSLFNSRVMEYLVALSKKVAHMRK--TEGVRRNDFLQLMVEHQDDSNAPSDD 80
+ I E L L + K T+G+ + L+ + ++ SN P D
Sbjct: 182 VLVGDLI------KFSAETLSELIRTTLDAEKVFTQGL---NILEWL---ENPSNTPDKD 229
Query: 81 ----------------------VIKVKTVTVGE-----NGETKQKVFLSEDTVTAQSI-- 111
K+ T GE G T S+ VTA +I
Sbjct: 230 YLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGH----SQGLVTAVAIAE 285
Query: 112 -----------------LFLIAGYE-------TSSTLLMFA----------SYQLSLNVD 137
LF I G TS + S LS
Sbjct: 286 TDSWESFFVSVRKAITVLFFI-GVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLS---- 340
Query: 138 IQDKLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSVARVDRHCTLDYTLPD 197
I + + V + ++K N L P+ +V +L
Sbjct: 341 ISNLTQEQVQDYVNK-------------------TNSHL---PAGKQV--EISL-VNGAK 375
Query: 198 TNIVIRAG--ESVNVPIMGLHYDPKYYPDPYKFDPDRFLP--EEKAKRSPYVFLPFGAGP 253
N+V+ +G +S + GL+ + P D R +P E K K S FLP + P
Sbjct: 376 -NLVV-SGPPQS----LYGLNLTLRKAKAPSGLDQSR-IPFSERKLKFS-NRFLPVAS-P 426
Score = 28.5 bits (63), Expect = 6.4
Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 47/143 (32%)
Query: 29 IPLSLFNSR---VM----EYLVALSKKVAHMRKTEGVRRNDFLQLMVEHQDDSNAPSDDV 81
+ +SL N V+ + L L +RK + D Q S P +
Sbjct: 366 VEISLVNGAKNLVVSGPPQSLYGL---NLTLRKAKAPSGLD--Q--------SRIPFSER 412
Query: 82 IKVKTVTVGENGETKQKVFLSEDTVTA-------QSILFLIAGYETSSTLLMFASYQLSL 134
K+K FL V + LI + + F + + +
Sbjct: 413 -KLKFSN----------RFL---PVASPFHSHLLVPASDLINKDLVKNNVS-FNAKDIQI 457
Query: 135 NV----DIQDKLRAHVNEILDKH 153
V D D LR I ++
Sbjct: 458 PVYDTFDGSD-LRVLSGSISERI 479
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase...; oxidoreductase, multienzyme complex;
HET: TPW; 2.35A {Bacillus stearothermophilus} PDB:
3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Length = 428
Score = 30.7 bits (70), Expect = 1.0
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 8/54 (14%)
Query: 136 VDIQD--KLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSV-ARVD 186
D+ R I + G K T+ + Y+ L LR +P + +D
Sbjct: 230 ADVTKLVAHRKKFKAIAAEKGIKLTF-----LPYVVKALVSALREYPVLNTSID 278
Score = 30.7 bits (70), Expect = 1.0
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 8/54 (14%)
Query: 348 VDIQD--KLRAHVNEILDKHGGKCTYEALQDMSYLEMVLNETLRMHPSV-ARVD 398
D+ R I + G K T+ + Y+ L LR +P + +D
Sbjct: 230 ADVTKLVAHRKKFKAIAAEKGIKLTF-----LPYVVKALVSALREYPVLNTSID 278
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural
genomics, NPPSFA, project on protein structural and
functional analyses; HET: FAD; 2.10A {Thermus
thermophilus}
Length = 335
Score = 30.2 bits (69), Expect = 1.3
Identities = 7/33 (21%), Positives = 14/33 (42%), Gaps = 5/33 (15%)
Query: 126 MFASYQLSLNVDIQDKLRAHVNEILDKHGGKCT 158
+FA + + + L + L + GG+ T
Sbjct: 18 LFAGFYVGMR-----GLSFRFVDPLPEPGGQLT 45
Score = 30.2 bits (69), Expect = 1.3
Identities = 7/33 (21%), Positives = 14/33 (42%), Gaps = 5/33 (15%)
Query: 338 MFASYQLSLNVDIQDKLRAHVNEILDKHGGKCT 370
+FA + + + L + L + GG+ T
Sbjct: 18 LFAGFYVGMR-----GLSFRFVDPLPEPGGQLT 45
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport,
FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum
tepidum}
Length = 360
Score = 30.3 bits (69), Expect = 1.4
Identities = 7/33 (21%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Query: 126 MFASYQLSLNVDIQDKLRAHVNEILDKHGGKCT 158
+FA++Q +N + + E + + GG+
Sbjct: 27 IFAAFQCGMN-----NISCRIIESMPQLGGQLA 54
Score = 30.3 bits (69), Expect = 1.4
Identities = 7/33 (21%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Query: 338 MFASYQLSLNVDIQDKLRAHVNEILDKHGGKCT 370
+FA++Q +N + + E + + GG+
Sbjct: 27 IFAAFQCGMN-----NISCRIIESMPQLGGQLA 54
>1p4p_A OSPB, outer surface protein B; intermolecular beta sheet, extended
beta sheet, membrane protein; 2.00A {Borrelia
burgdorferi} SCOP: b.76.1.1 PDB: 1rjl_C
Length = 145
Score = 29.3 bits (65), Expect = 1.4
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 86 TVTVGENGE-TKQKVFLSEDTVTAQSILFLIAGYETSSTLL 125
T+T+ + + TK VFL++ T+T Q Y T+ T L
Sbjct: 94 TLTISADSKKTKDLVFLTDGTITVQQ-------YNTAGTSL 127
Score = 29.3 bits (65), Expect = 1.4
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
Query: 298 TVTVGENGE-TKQKVFLSEDTVTAQSILFLIAGYETSSTLL 337
T+T+ + + TK VFL++ T+T Q Y T+ T L
Sbjct: 94 TLTISADSKKTKDLVFLTDGTITVQQ-------YNTAGTSL 127
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH,
flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus
subtilis} PDB: 3lzx_A*
Length = 332
Score = 29.9 bits (68), Expect = 2.0
Identities = 5/33 (15%), Positives = 14/33 (42%), Gaps = 5/33 (15%)
Query: 126 MFASYQLSLNVDIQDKLRAHVNEILDKHGGKCT 158
+F ++ + + + E L + GG+ +
Sbjct: 20 LFTAFYGGMR-----QASVKIIESLPQLGGQLS 47
Score = 29.9 bits (68), Expect = 2.0
Identities = 5/33 (15%), Positives = 14/33 (42%), Gaps = 5/33 (15%)
Query: 338 MFASYQLSLNVDIQDKLRAHVNEILDKHGGKCT 370
+F ++ + + + E L + GG+ +
Sbjct: 20 LFTAFYGGMR-----QASVKIIESLPQLGGQLS 47
>2oy7_A Outer surface protein A; beta-sheet, membrane protein; 1.55A
{Borrelia burgdorferi} PDB: 2oy8_A 3cka_A* 3ec5_A*
2hkd_A* 3eex_A 2fkg_A 2af5_A
Length = 320
Score = 29.2 bits (64), Expect = 3.3
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 85 KTVTVGENG-ETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLR 143
T+T+ N +TK VF S +T+T Q Y+++ T L ++ +++ +I++ L+
Sbjct: 268 STLTITVNSKKTKDLVFTSSNTITVQQ-------YDSNGTSLEGSAVEITKLDEIKNALK 320
Score = 29.2 bits (64), Expect = 3.3
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 297 KTVTVGENG-ETKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLR 355
T+T+ N +TK VF S +T+T Q Y+++ T L ++ +++ +I++ L+
Sbjct: 268 STLTITVNSKKTKDLVFTSSNTITVQQ-------YDSNGTSLEGSAVEITKLDEIKNALK 320
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion
virulence; 1.05A {Staphylococcus aureus subsp}
Length = 215
Score = 28.4 bits (63), Expect = 3.9
Identities = 14/74 (18%), Positives = 20/74 (27%), Gaps = 8/74 (10%)
Query: 169 EMVLNETLRMHPSVARVDRHCTLDYTL---PDTNIVIRAGESVNVPIMGLHYDPKYYPDP 225
NE LR ++ ++ YT PD + + DP
Sbjct: 77 SFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPD-ELFFTRDGLPIA----KTRGLQNVVDP 131
Query: 226 YKFDPDRFLPEEKA 239
FL KA
Sbjct: 132 LPVSEAEFLTRYKA 145
Score = 28.4 bits (63), Expect = 3.9
Identities = 14/74 (18%), Positives = 20/74 (27%), Gaps = 8/74 (10%)
Query: 381 EMVLNETLRMHPSVARVDRHCTLDYTL---PDTNIVIRAGESVNVPIMGLHYDPKYYPDP 437
NE LR ++ ++ YT PD + + DP
Sbjct: 77 SFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPD-ELFFTRDGLPIA----KTRGLQNVVDP 131
Query: 438 YKFDPDRFLPEEKA 451
FL KA
Sbjct: 132 LPVSEAEFLTRYKA 145
>2i5v_O Outer surface protein A; beta-sheet, de novo protein; HET: PG4;
1.10A {Borrelia burgdorferi} PDB: 2g8c_O* 2pi3_O 2oyb_O
2i5z_O* 2ol6_O 2oy5_O 3aum_O 2ol7_A 1osp_O 1fj1_E 3ckg_A
2ol8_O 2oy1_O 3ckf_A
Length = 251
Score = 28.6 bits (63), Expect = 4.5
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 86 TVTVGENGE-TKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLR 143
T+T+ N + TK VF S +T+T Q Y+++ T L ++ +++ +I++ L+
Sbjct: 200 TLTITVNSKKTKDLVFTSSNTITVQQ-------YDSNGTSLEGSAVEITKLDEIKNALK 251
Score = 28.6 bits (63), Expect = 4.5
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 298 TVTVGENGE-TKQKVFLSEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLR 355
T+T+ N + TK VF S +T+T Q Y+++ T L ++ +++ +I++ L+
Sbjct: 200 TLTITVNSKKTKDLVFTSSNTITVQQ-------YDSNGTSLEGSAVEITKLDEIKNALK 251
>4dgw_C PRE-mRNA-splicing factor PRP11; zinc finger; 3.11A {Saccharomyces
cerevisiae}
Length = 231
Score = 27.8 bits (61), Expect = 7.9
Identities = 10/69 (14%), Positives = 17/69 (24%), Gaps = 15/69 (21%)
Query: 415 RAGESVNVPIMGLHYDP-KYYPDPYKFDPDRFLP-------EEKAKRSP--YVFLPFGAG 464
G ++ V +Y D + P E + FL
Sbjct: 115 SVGMAIQV-----NYSSEVKENSVDSDDKAKVPPLIRIVSGLELSDTKQKGKKFLVIAYE 169
Query: 465 PRNCIGFKI 473
P I ++
Sbjct: 170 PFENIAIEL 178
>3agj_B Protein pelota homolog; GTP binding, translation-hydrolase complex;
HET: GTP; 2.30A {Aeropyrum pernix}
Length = 358
Score = 27.8 bits (61), Expect = 8.2
Identities = 29/171 (16%), Positives = 50/171 (29%), Gaps = 18/171 (10%)
Query: 50 AHMRKTEGVRRNDFLQLMVEHQDD----SN-APSDDVIKVKT---VTVGENGETKQKVFL 101
+HMR + ++L E ++D DV++ +T V VG + + + L
Sbjct: 1 SHMRVEVLDNKRRIVRLRPESEEDLWLLRITLRPGDVVRKRTSRDVPVGSGRKERVVMTL 60
Query: 102 SEDTVTAQSILFLIAGYETSSTLLMFASYQLSLNVDIQDKLRAHVNEILDKHGGKCTYEA 161
+ SI F T + S + D + +
Sbjct: 61 ---RIRLDSIEF------QPFTGKLRISGIVVEGPDEFGVKGRRHSTAVSIGTWLVVERD 111
Query: 162 LQDMSY-LEMVLNETLRMHPSVARVDRHCTLDYTLPDTNIVIRAGESVNVP 211
LE + R +A VD L + I S +P
Sbjct: 112 KGWSEQELERLAAGRARGTAVIAAVDYDEFALAVLAGHGMKILEDTSARLP 162
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.138 0.407
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,440,719
Number of extensions: 454919
Number of successful extensions: 1464
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1064
Number of HSP's successfully gapped: 178
Length of query: 482
Length of database: 6,701,793
Length adjustment: 97
Effective length of query: 385
Effective length of database: 3,993,456
Effective search space: 1537480560
Effective search space used: 1537480560
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (26.4 bits)