Query psy17080
Match_columns 565
No_of_seqs 595 out of 3082
Neff 10.2
Searched_HMMs 46136
Date Fri Aug 16 21:21:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17080.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17080hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00898 2A0119 cation transp 100.0 2E-58 4.4E-63 486.4 53.1 489 36-529 1-499 (505)
2 KOG0255|consensus 100.0 3.6E-49 7.7E-54 416.7 51.9 496 26-539 2-509 (521)
3 TIGR01299 synapt_SV2 synaptic 100.0 4.3E-44 9.2E-49 380.6 41.5 425 25-529 150-738 (742)
4 KOG0253|consensus 100.0 8.1E-44 1.8E-48 329.3 29.3 422 26-529 62-524 (528)
5 TIGR00887 2A0109 phosphate:H+ 100.0 3.9E-39 8.5E-44 338.2 33.9 428 30-539 4-501 (502)
6 KOG0569|consensus 100.0 6.2E-37 1.3E-41 306.1 36.2 380 155-540 60-468 (485)
7 PRK10077 xylE D-xylose transpo 100.0 3E-33 6.6E-38 293.1 37.2 387 141-542 44-473 (479)
8 KOG0254|consensus 100.0 7E-33 1.5E-37 290.9 34.5 385 155-543 89-500 (513)
9 PRK10642 proline/glycine betai 100.0 6.6E-32 1.4E-36 282.5 36.3 361 140-529 39-434 (490)
10 TIGR00903 2A0129 major facilit 100.0 1.5E-31 3.2E-36 267.9 32.0 345 140-526 14-366 (368)
11 PF00083 Sugar_tr: Sugar (and 100.0 1.1E-38 2.3E-43 331.7 -20.9 379 153-540 44-450 (451)
12 TIGR00879 SP MFS transporter, 100.0 7E-31 1.5E-35 275.2 33.5 388 140-529 51-475 (481)
13 COG2271 UhpC Sugar phosphate p 100.0 5.4E-31 1.2E-35 251.5 27.2 362 140-523 52-432 (448)
14 PRK10406 alpha-ketoglutarate t 100.0 1.6E-29 3.5E-34 260.6 38.1 328 158-524 66-423 (432)
15 COG2814 AraJ Arabinose efflux 100.0 4.3E-30 9.4E-35 249.3 31.6 341 140-525 36-386 (394)
16 PRK09952 shikimate transporter 100.0 1.2E-29 2.6E-34 261.6 34.6 335 161-528 70-436 (438)
17 TIGR02332 HpaX 4-hydroxyphenyl 100.0 4.5E-30 9.7E-35 262.6 30.3 358 140-514 31-410 (412)
18 PRK12307 putative sialic acid 100.0 8.1E-29 1.7E-33 255.6 36.5 333 141-504 42-387 (426)
19 TIGR00890 2A0111 Oxalate/Forma 100.0 6.4E-30 1.4E-34 259.2 25.8 347 132-518 18-375 (377)
20 PRK11551 putative 3-hydroxyphe 100.0 2.7E-28 5.8E-33 250.1 37.4 346 140-525 38-396 (406)
21 TIGR00891 2A0112 putative sial 100.0 1.1E-28 2.4E-33 252.8 34.2 344 141-502 36-392 (405)
22 PRK03545 putative arabinose tr 100.0 8.3E-29 1.8E-33 252.2 32.3 337 140-523 32-378 (390)
23 PRK09556 uhpT sugar phosphate 100.0 5.2E-29 1.1E-33 259.4 31.0 364 140-524 52-448 (467)
24 PRK09705 cynX putative cyanate 100.0 1.5E-28 3.3E-33 250.0 33.1 345 137-529 29-386 (393)
25 KOG0252|consensus 100.0 5E-31 1.1E-35 252.6 13.2 372 154-540 83-511 (538)
26 PRK11663 regulatory protein Uh 100.0 2.2E-27 4.9E-32 244.7 38.0 361 140-522 46-421 (434)
27 TIGR00893 2A0114 d-galactonate 100.0 1.9E-28 4.2E-33 250.0 29.2 362 140-522 17-396 (399)
28 PLN00028 nitrate transmembrane 100.0 4.8E-28 1E-32 251.9 31.6 351 140-526 59-434 (476)
29 PRK11273 glpT sn-glycerol-3-ph 100.0 4.5E-27 9.8E-32 243.7 38.2 353 153-524 61-434 (452)
30 PRK05122 major facilitator sup 100.0 2E-27 4.3E-32 243.0 32.8 338 143-529 42-393 (399)
31 PRK10489 enterobactin exporter 100.0 1.1E-27 2.5E-32 246.1 30.1 358 140-539 40-412 (417)
32 TIGR00895 2A0115 benzoate tran 100.0 1E-26 2.2E-31 237.6 33.5 342 141-495 41-393 (398)
33 PRK10213 nepI ribonucleoside t 100.0 1.6E-26 3.4E-31 235.0 34.3 333 140-519 43-385 (394)
34 TIGR00899 2A0120 sugar efflux 100.0 1.5E-26 3.3E-31 234.5 32.9 339 143-526 24-375 (375)
35 PRK03893 putative sialic acid 100.0 3.2E-26 7E-31 241.0 36.2 370 140-514 43-442 (496)
36 TIGR00894 2A0114euk Na(+)-depe 100.0 4.6E-27 9.9E-32 245.1 29.4 359 144-527 68-452 (465)
37 PRK12382 putative transporter; 100.0 3E-26 6.6E-31 233.6 33.6 329 143-523 42-387 (392)
38 PRK14995 methyl viologen resis 100.0 4.6E-26 9.9E-31 238.6 32.3 350 140-495 29-406 (495)
39 PRK03699 putative transporter; 100.0 4.9E-26 1.1E-30 232.0 31.6 344 140-528 30-383 (394)
40 PRK15075 citrate-proton sympor 100.0 8.7E-26 1.9E-30 233.0 33.8 350 140-529 38-424 (434)
41 PRK10091 MFS transport protein 100.0 6E-26 1.3E-30 230.3 31.6 338 140-524 26-375 (382)
42 PRK10504 putative transporter; 100.0 2.1E-25 4.6E-30 233.1 36.7 349 140-495 33-408 (471)
43 TIGR00900 2A0121 H+ Antiporter 100.0 4.9E-26 1.1E-30 229.7 30.5 318 141-495 23-356 (365)
44 PF07690 MFS_1: Major Facilita 100.0 1E-26 2.2E-31 233.5 24.9 319 142-493 22-352 (352)
45 PRK03633 putative MFS family t 100.0 2E-25 4.3E-30 226.5 33.7 335 140-524 29-371 (381)
46 TIGR00710 efflux_Bcr_CflA drug 100.0 9.1E-26 2E-30 229.7 31.3 336 140-517 28-376 (385)
47 PRK15034 nitrate/nitrite trans 100.0 1E-25 2.2E-30 227.0 29.7 339 140-525 57-454 (462)
48 KOG2532|consensus 99.9 1.2E-25 2.7E-30 228.1 29.6 355 144-524 65-446 (466)
49 TIGR00892 2A0113 monocarboxyla 99.9 1.9E-26 4.2E-31 238.6 23.5 362 137-519 39-415 (455)
50 TIGR00711 efflux_EmrB drug res 99.9 2.6E-25 5.6E-30 233.6 31.6 350 140-495 25-403 (485)
51 PRK11195 lysophospholipid tran 99.9 1.5E-25 3.3E-30 227.7 28.6 343 141-522 27-377 (393)
52 TIGR00881 2A0104 phosphoglycer 99.9 1.4E-26 3E-31 234.9 19.8 343 140-504 18-376 (379)
53 cd06174 MFS The Major Facilita 99.9 3.5E-25 7.6E-30 222.1 29.4 320 140-524 22-351 (352)
54 PRK09874 drug efflux system pr 99.9 2.3E-25 5E-30 228.5 28.7 344 140-523 37-396 (408)
55 PRK11043 putative transporter; 99.9 1.2E-24 2.7E-29 222.5 33.5 312 140-495 29-350 (401)
56 TIGR00897 2A0118 polyol permea 99.9 8.9E-25 1.9E-29 223.2 31.5 347 140-525 36-401 (402)
57 PRK15402 multidrug efflux syst 99.9 1.2E-24 2.6E-29 222.9 32.3 316 140-495 36-363 (406)
58 PRK15403 multidrug efflux syst 99.9 1.5E-24 3.2E-29 221.9 32.7 338 140-517 39-389 (413)
59 TIGR00712 glpT glycerol-3-phos 99.9 7.9E-25 1.7E-29 226.1 30.2 361 146-528 55-437 (438)
60 PRK11102 bicyclomycin/multidru 99.9 1.3E-24 2.8E-29 220.5 31.2 318 140-496 14-343 (377)
61 TIGR00883 2A0106 metabolite-pr 99.9 8.2E-25 1.8E-29 223.2 29.7 312 164-511 44-387 (394)
62 PRK10133 L-fucose transporter; 99.9 1.9E-24 4.1E-29 222.1 31.6 336 140-518 49-426 (438)
63 PRK10473 multidrug efflux syst 99.9 2E-24 4.4E-29 220.2 31.2 312 140-495 26-346 (392)
64 PRK11646 multidrug resistance 99.9 1.8E-24 3.8E-29 220.5 29.9 335 143-521 37-384 (400)
65 KOG2533|consensus 99.9 2E-25 4.4E-30 226.9 22.6 330 143-495 72-423 (495)
66 TIGR00889 2A0110 nucleoside tr 99.9 1.8E-24 3.8E-29 221.3 28.4 346 140-529 26-407 (418)
67 PRK10054 putative transporter; 99.9 3.2E-24 7E-29 218.1 29.7 333 142-518 33-377 (395)
68 TIGR00885 fucP L-fucose:H+ sym 99.9 5.7E-24 1.2E-28 216.7 31.1 310 140-495 26-374 (410)
69 PRK15011 sugar efflux transpor 99.9 2.4E-23 5.3E-28 212.0 34.1 339 142-527 41-393 (393)
70 PRK11652 emrD multidrug resist 99.9 1.7E-23 3.6E-28 213.6 31.4 314 140-496 31-354 (394)
71 TIGR00902 2A0127 phenyl propri 99.9 1.9E-23 4.2E-28 211.8 30.8 338 140-522 27-376 (382)
72 PRK11010 ampG muropeptide tran 99.9 2.6E-23 5.6E-28 216.8 32.5 348 140-527 35-405 (491)
73 TIGR00886 2A0108 nitrite extru 99.9 1.3E-24 2.9E-29 219.5 21.0 318 140-488 24-365 (366)
74 TIGR00896 CynX cyanate transpo 99.9 2.7E-23 5.8E-28 208.9 30.1 310 139-495 22-341 (355)
75 COG2223 NarK Nitrate/nitrite t 99.9 1.5E-23 3.3E-28 201.2 24.2 341 140-524 37-400 (417)
76 TIGR00792 gph sugar (Glycoside 99.9 1.2E-22 2.5E-27 210.5 31.7 316 141-495 24-373 (437)
77 PRK08633 2-acyl-glycerophospho 99.9 6.4E-23 1.4E-27 237.6 31.0 312 153-495 45-377 (1146)
78 PRK11128 putative 3-phenylprop 99.9 3E-22 6.4E-27 203.3 30.2 334 140-519 27-373 (382)
79 PRK09528 lacY galactoside perm 99.9 9.1E-23 2E-27 209.9 26.2 349 143-526 37-405 (420)
80 PRK11902 ampG muropeptide tran 99.9 7.6E-22 1.7E-26 201.7 31.4 344 140-527 22-392 (402)
81 TIGR00901 2A0125 AmpG-related 99.9 9.6E-23 2.1E-27 205.1 23.8 307 140-486 11-355 (356)
82 PF05977 MFS_3: Transmembrane 99.9 1.2E-21 2.7E-26 202.5 32.3 337 153-524 43-393 (524)
83 KOG1330|consensus 99.9 3.6E-25 7.7E-30 213.8 4.8 323 140-495 56-405 (493)
84 TIGR00882 2A0105 oligosacchari 99.9 5.7E-22 1.2E-26 202.4 28.1 340 144-521 30-391 (396)
85 PRK06814 acylglycerophosphoeth 99.9 4.9E-22 1.1E-26 229.4 30.3 311 153-495 50-389 (1140)
86 PTZ00207 hypothetical protein; 99.9 3.7E-22 8E-27 206.8 24.4 401 129-537 39-566 (591)
87 KOG2504|consensus 99.9 9.9E-23 2.1E-27 209.6 19.2 391 130-529 59-481 (509)
88 PF06609 TRI12: Fungal trichot 99.9 1.4E-20 3.1E-25 193.6 34.5 351 140-495 67-460 (599)
89 KOG2615|consensus 99.9 5E-22 1.1E-26 186.6 20.6 320 153-496 66-408 (451)
90 TIGR00806 rfc RFC reduced fola 99.9 1.1E-21 2.4E-26 193.7 22.1 344 140-493 49-406 (511)
91 TIGR00924 yjdL_sub1_fam amino 99.9 2.1E-20 4.6E-25 194.0 30.6 371 147-521 43-464 (475)
92 PRK10207 dipeptide/tripeptide 99.9 1.5E-20 3.2E-25 195.1 29.0 372 143-523 41-474 (489)
93 KOG3764|consensus 99.9 5.9E-22 1.3E-26 187.3 15.3 333 153-525 104-454 (464)
94 COG0738 FucP Fucose permease [ 99.9 7.1E-20 1.5E-24 174.7 27.2 334 140-518 36-402 (422)
95 TIGR02718 sider_RhtX_FptX side 99.9 6.7E-19 1.5E-23 179.3 32.9 340 140-520 24-386 (390)
96 TIGR01301 GPH_sucrose GPH fami 99.8 1.2E-18 2.6E-23 177.3 29.0 358 141-529 28-476 (477)
97 PRK09669 putative symporter Ya 99.8 7.4E-18 1.6E-22 174.6 32.6 311 144-495 37-381 (444)
98 PF03825 Nuc_H_symport: Nucleo 99.8 7.4E-18 1.6E-22 169.5 30.7 350 140-527 25-398 (400)
99 PF11700 ATG22: Vacuole efflux 99.8 5E-17 1.1E-21 166.6 37.3 347 153-529 68-472 (477)
100 PRK10429 melibiose:sodium symp 99.8 6.1E-18 1.3E-22 176.3 31.2 315 145-495 35-386 (473)
101 TIGR00805 oat sodium-independe 99.8 3.5E-20 7.6E-25 197.7 12.5 274 140-430 56-413 (633)
102 PRK09584 tppB putative tripept 99.8 1.2E-17 2.6E-22 174.5 29.6 368 143-521 48-475 (500)
103 COG2807 CynX Cyanate permease 99.8 1.4E-16 3.1E-21 150.0 28.9 333 140-519 35-379 (395)
104 TIGR00788 fbt folate/biopterin 99.8 2.3E-17 5E-22 170.9 26.2 363 140-526 49-447 (468)
105 PRK09848 glucuronide transport 99.8 2.1E-16 4.6E-21 164.0 33.0 310 143-495 35-381 (448)
106 PF13347 MFS_2: MFS/sugar tran 99.8 3.8E-17 8.2E-22 168.4 24.2 312 145-495 30-377 (428)
107 COG2211 MelB Na+/melibiose sym 99.8 9.9E-16 2.2E-20 152.5 28.7 314 145-495 41-389 (467)
108 PF01306 LacY_symp: LacY proto 99.7 3E-15 6.4E-20 147.8 29.0 345 147-528 38-404 (412)
109 PRK11462 putative transporter; 99.7 1.7E-14 3.6E-19 149.4 33.1 308 145-495 38-380 (460)
110 COG2270 Permeases of the major 99.7 5E-15 1.1E-19 142.8 26.2 343 153-528 56-432 (438)
111 PRK15462 dipeptide/tripeptide 99.7 1.1E-14 2.3E-19 149.2 30.1 346 144-495 37-433 (493)
112 TIGR01272 gluP glucose/galacto 99.7 9.4E-15 2E-19 142.9 26.4 267 204-511 6-301 (310)
113 KOG4686|consensus 99.7 6E-15 1.3E-19 133.3 17.7 367 132-526 58-444 (459)
114 PRK10642 proline/glycine betai 99.6 3.3E-14 7.1E-19 149.1 14.2 172 140-315 273-458 (490)
115 KOG2563|consensus 99.5 1E-12 2.2E-17 127.7 20.2 344 153-528 77-453 (480)
116 PF03209 PUCC: PUCC protein; 99.5 7E-11 1.5E-15 114.9 30.7 314 141-495 4-360 (403)
117 COG3104 PTR2 Dipeptide/tripept 99.5 4.8E-11 1E-15 118.2 27.4 368 153-521 59-483 (498)
118 TIGR00880 2_A_01_02 Multidrug 99.4 4.6E-13 1E-17 114.7 10.1 133 161-293 4-140 (141)
119 KOG2816|consensus 99.4 4.8E-11 1E-15 121.3 22.9 303 163-495 70-385 (463)
120 KOG2325|consensus 99.4 7.3E-12 1.6E-16 125.4 15.9 143 153-296 69-234 (488)
121 TIGR01299 synapt_SV2 synaptic 99.4 4.9E-12 1.1E-16 135.9 14.2 140 156-295 596-737 (742)
122 PF03092 BT1: BT1 family; Int 99.3 1.1E-09 2.3E-14 112.2 27.7 363 140-529 13-417 (433)
123 PF03137 OATP: Organic Anion T 99.3 3.1E-13 6.7E-18 140.8 -0.2 346 140-495 26-507 (539)
124 PRK15011 sugar efflux transpor 99.1 4.4E-10 9.4E-15 114.6 13.5 146 144-293 244-392 (393)
125 TIGR00889 2A0110 nucleoside tr 99.1 4.1E-10 8.9E-15 115.5 13.3 140 155-294 251-405 (418)
126 TIGR00893 2A0114 d-galactonate 99.1 1.6E-09 3.4E-14 110.3 17.1 140 389-529 32-174 (399)
127 PRK11663 regulatory protein Uh 99.1 1.5E-09 3.2E-14 112.2 17.1 150 378-528 47-202 (434)
128 KOG3098|consensus 99.1 3.1E-08 6.6E-13 99.5 25.5 299 161-494 56-406 (461)
129 PF01770 Folate_carrier: Reduc 99.1 8.1E-09 1.7E-13 101.9 20.9 325 159-489 45-389 (412)
130 TIGR00891 2A0112 putative sial 99.1 1.9E-09 4.1E-14 110.3 17.0 140 389-529 50-193 (405)
131 PRK09528 lacY galactoside perm 99.1 3.3E-10 7.2E-15 116.6 11.4 142 153-294 260-406 (420)
132 TIGR00900 2A0121 H+ Antiporter 99.1 2.9E-09 6.3E-14 107.2 17.8 157 367-524 12-178 (365)
133 cd06174 MFS The Major Facilita 99.1 4.8E-10 1E-14 112.1 11.6 147 141-290 199-350 (352)
134 PRK05122 major facilitator sup 99.1 1.1E-09 2.5E-14 111.9 14.2 137 157-293 251-390 (399)
135 PRK10054 putative transporter; 99.1 6.9E-09 1.5E-13 105.7 19.7 173 355-528 8-186 (395)
136 PRK03545 putative arabinose tr 99.1 1.1E-08 2.4E-13 104.3 21.1 146 381-527 36-187 (390)
137 PRK10489 enterobactin exporter 99.1 2.3E-09 4.9E-14 110.3 15.9 180 349-528 12-200 (417)
138 TIGR00880 2_A_01_02 Multidrug 99.1 4.3E-09 9.3E-14 89.9 15.0 131 395-526 7-140 (141)
139 TIGR00895 2A0115 benzoate tran 99.1 1.4E-09 2.9E-14 111.1 13.9 152 377-529 40-197 (398)
140 PF05631 DUF791: Protein of un 99.1 2.9E-08 6.3E-13 95.3 21.7 146 145-294 62-219 (354)
141 PRK11551 putative 3-hydroxyphe 99.1 7.6E-10 1.6E-14 113.5 11.8 150 140-292 243-396 (406)
142 TIGR00887 2A0109 phosphate:H+ 99.1 8.3E-09 1.8E-13 108.8 19.8 139 390-529 60-229 (502)
143 PF07690 MFS_1: Major Facilita 99.1 5.7E-09 1.2E-13 104.6 17.1 140 388-528 34-176 (352)
144 TIGR00710 efflux_Bcr_CflA drug 99.1 1.4E-08 3.1E-13 103.1 19.9 148 381-529 32-185 (385)
145 TIGR02332 HpaX 4-hydroxyphenyl 99.0 1.7E-08 3.6E-13 103.5 20.4 148 381-529 35-194 (412)
146 PRK10213 nepI ribonucleoside t 99.0 2.5E-08 5.5E-13 101.6 21.0 138 390-528 59-199 (394)
147 PRK10473 multidrug efflux syst 99.0 1.8E-08 3.8E-13 102.8 19.8 152 377-529 26-183 (392)
148 TIGR00890 2A0111 Oxalate/Forma 99.0 1E-09 2.2E-14 111.1 10.6 141 141-284 229-374 (377)
149 TIGR00899 2A0120 sugar efflux 99.0 2.5E-09 5.4E-14 108.3 13.4 146 144-293 227-375 (375)
150 PRK11195 lysophospholipid tran 99.0 1.3E-08 2.9E-13 103.5 18.6 170 355-528 4-177 (393)
151 TIGR00892 2A0113 monocarboxyla 99.0 8.9E-10 1.9E-14 114.4 9.9 144 140-286 264-415 (455)
152 PRK12307 putative sialic acid 99.0 1.5E-08 3.2E-13 104.7 18.8 138 374-512 38-180 (426)
153 PRK15403 multidrug efflux syst 99.0 2.6E-08 5.7E-13 102.1 20.4 138 391-529 56-196 (413)
154 COG2814 AraJ Arabinose efflux 99.0 2.7E-08 5.8E-13 97.8 19.1 137 388-525 50-189 (394)
155 PRK11646 multidrug resistance 99.0 3.6E-08 7.8E-13 100.7 21.0 166 361-527 17-188 (400)
156 PRK10091 MFS transport protein 99.0 2.8E-08 6.1E-13 100.9 20.1 148 380-528 29-182 (382)
157 PRK12382 putative transporter; 99.0 3.9E-09 8.5E-14 107.6 13.6 133 157-289 251-386 (392)
158 COG2271 UhpC Sugar phosphate p 99.0 2.1E-09 4.7E-14 104.2 10.3 144 388-532 66-217 (448)
159 TIGR00898 2A0119 cation transp 99.0 1.1E-08 2.4E-13 108.1 16.9 139 389-529 130-268 (505)
160 PRK09874 drug efflux system pr 99.0 3.3E-09 7.2E-14 108.8 12.0 133 157-289 260-395 (408)
161 KOG3626|consensus 99.0 4.1E-09 8.9E-14 110.2 12.3 267 140-423 120-468 (735)
162 PRK10504 putative transporter; 99.0 4.2E-08 9E-13 102.7 20.0 155 372-527 28-188 (471)
163 TIGR00711 efflux_EmrB drug res 99.0 2.2E-08 4.8E-13 105.3 17.9 153 376-529 24-182 (485)
164 PRK03699 putative transporter; 99.0 2.7E-08 5.9E-13 101.4 17.5 132 390-522 46-180 (394)
165 PRK10077 xylE D-xylose transpo 98.9 4.2E-08 9E-13 103.0 19.0 141 389-529 58-219 (479)
166 PRK09556 uhpT sugar phosphate 98.9 8E-09 1.7E-13 107.8 13.2 147 140-289 281-446 (467)
167 PRK10406 alpha-ketoglutarate t 98.9 3.8E-08 8.2E-13 101.7 18.0 132 396-528 73-222 (432)
168 TIGR00881 2A0104 phosphoglycer 98.9 4.6E-09 1E-13 106.3 11.1 139 389-528 33-175 (379)
169 PRK03893 putative sialic acid 98.9 5.8E-08 1.3E-12 102.4 19.4 137 390-527 59-197 (496)
170 PRK14995 methyl viologen resis 98.9 9E-08 1.9E-12 100.6 20.7 153 375-528 27-186 (495)
171 PRK15402 multidrug efflux syst 98.9 6.6E-08 1.4E-12 99.1 19.2 139 390-529 52-193 (406)
172 TIGR00924 yjdL_sub1_fam amino 98.9 3E-08 6.4E-13 103.4 16.7 136 389-525 51-192 (475)
173 TIGR00879 SP MFS transporter, 98.9 5.2E-08 1.1E-12 102.0 18.7 141 388-528 73-220 (481)
174 PRK03633 putative MFS family t 98.9 1.2E-08 2.6E-13 103.5 13.2 145 140-290 223-370 (381)
175 KOG2615|consensus 98.9 5E-09 1.1E-13 99.8 9.2 139 389-529 71-218 (451)
176 PRK11273 glpT sn-glycerol-3-ph 98.9 1E-07 2.2E-12 99.0 20.1 140 389-529 66-213 (452)
177 PLN00028 nitrate transmembrane 98.9 2E-07 4.4E-12 97.4 22.1 134 391-526 76-220 (476)
178 PRK09952 shikimate transporter 98.9 2.1E-08 4.5E-13 103.7 14.3 147 145-294 279-435 (438)
179 PF05977 MFS_3: Transmembrane 98.9 8.8E-08 1.9E-12 99.9 18.9 178 348-525 4-190 (524)
180 PRK11043 putative transporter; 98.9 1.7E-07 3.6E-12 96.0 20.9 139 389-528 44-184 (401)
181 TIGR00903 2A0129 major facilit 98.9 8.3E-08 1.8E-12 96.5 18.0 139 389-529 29-170 (368)
182 PRK11652 emrD multidrug resist 98.9 2E-07 4.3E-12 95.1 20.6 140 389-529 46-188 (394)
183 TIGR00712 glpT glycerol-3-phos 98.9 5.1E-08 1.1E-12 100.9 16.4 139 389-528 64-210 (438)
184 TIGR00902 2A0127 phenyl propri 98.9 2E-08 4.4E-13 101.9 13.1 143 140-287 228-374 (382)
185 PRK15462 dipeptide/tripeptide 98.9 5.8E-08 1.3E-12 99.9 16.4 130 392-522 51-186 (493)
186 PRK11102 bicyclomycin/multidru 98.9 7.3E-08 1.6E-12 97.7 17.0 139 389-528 29-170 (377)
187 KOG3762|consensus 98.8 9.4E-08 2E-12 95.3 15.4 170 349-521 366-543 (618)
188 PRK11010 ampG muropeptide tran 98.8 5.4E-07 1.2E-11 94.4 21.0 160 369-528 27-198 (491)
189 KOG0255|consensus 98.8 1.2E-07 2.5E-12 100.7 16.1 138 390-529 122-259 (521)
190 TIGR00897 2A0118 polyol permea 98.8 3.3E-07 7.2E-12 93.7 18.7 154 357-510 16-178 (402)
191 PRK09584 tppB putative tripept 98.8 2.8E-07 6.2E-12 96.6 18.5 171 348-519 14-195 (500)
192 TIGR00894 2A0114euk Na(+)-depe 98.8 1.7E-07 3.6E-12 98.0 16.4 135 390-524 80-218 (465)
193 KOG3764|consensus 98.8 3.6E-08 7.9E-13 94.7 10.1 140 387-527 107-249 (464)
194 PRK15034 nitrate/nitrite trans 98.8 1.2E-06 2.5E-11 89.4 21.6 104 389-494 73-181 (462)
195 PF06813 Nodulin-like: Nodulin 98.8 5.8E-08 1.3E-12 90.2 10.6 161 129-294 14-184 (250)
196 PRK06814 acylglycerophosphoeth 98.8 2.2E-07 4.7E-12 108.2 18.0 180 349-528 6-198 (1140)
197 TIGR00886 2A0108 nitrite extru 98.7 5.4E-07 1.2E-11 90.9 18.6 105 389-495 40-145 (366)
198 PRK09705 cynX putative cyanate 98.7 1E-07 2.3E-12 97.1 13.2 151 140-295 228-385 (393)
199 TIGR00885 fucP L-fucose:H+ sym 98.7 1.2E-06 2.6E-11 89.6 20.8 133 389-521 41-203 (410)
200 PF11700 ATG22: Vacuole efflux 98.7 1.8E-07 3.9E-12 96.5 14.5 147 145-294 310-470 (477)
201 KOG0569|consensus 98.7 3.6E-07 7.8E-12 92.8 16.0 137 393-529 67-209 (485)
202 TIGR00883 2A0106 metabolite-pr 98.7 5E-08 1.1E-12 99.3 9.8 140 140-282 242-391 (394)
203 KOG1330|consensus 98.7 1E-08 2.3E-13 100.5 4.3 140 389-529 71-214 (493)
204 PRK08633 2-acyl-glycerophospho 98.7 3.4E-07 7.3E-12 106.9 17.6 106 390-495 51-158 (1146)
205 PRK15075 citrate-proton sympor 98.7 4.6E-07 1E-11 93.7 16.7 111 400-511 70-198 (434)
206 PTZ00207 hypothetical protein; 98.7 1.1E-06 2.4E-11 92.2 18.9 123 402-525 77-206 (591)
207 KOG0254|consensus 98.7 2.9E-07 6.3E-12 97.2 14.9 140 389-529 92-234 (513)
208 TIGR00769 AAA ADP/ATP carrier 98.7 6.6E-05 1.4E-09 76.8 30.5 248 154-427 42-344 (472)
209 PRK10207 dipeptide/tripeptide 98.7 5.5E-07 1.2E-11 94.0 15.7 129 396-525 60-194 (489)
210 PRK11128 putative 3-phenylprop 98.6 3.8E-07 8.2E-12 92.6 13.8 139 141-284 229-371 (382)
211 TIGR00792 gph sugar (Glycoside 98.6 7.3E-07 1.6E-11 92.4 15.4 114 154-267 256-377 (437)
212 TIGR00901 2A0125 AmpG-related 98.6 3.3E-06 7.1E-11 84.9 18.9 125 403-528 38-182 (356)
213 PRK10133 L-fucose transporter; 98.6 7.1E-06 1.5E-10 84.7 21.5 115 381-495 53-172 (438)
214 COG2270 Permeases of the major 98.6 2.9E-07 6.2E-12 89.8 10.2 146 146-294 282-431 (438)
215 PF02487 CLN3: CLN3 protein; 98.6 1.2E-05 2.6E-10 79.6 21.7 318 158-496 62-391 (402)
216 KOG4332|consensus 98.6 9.3E-06 2E-10 73.9 18.9 329 153-521 70-427 (454)
217 PRK11902 ampG muropeptide tran 98.6 6.1E-06 1.3E-10 84.5 20.1 161 369-529 14-186 (402)
218 TIGR00882 2A0105 oligosacchari 98.6 4.2E-07 9E-12 92.8 11.2 134 154-287 253-390 (396)
219 COG0477 ProP Permeases of the 98.5 1.4E-06 3E-11 85.0 14.3 127 155-281 39-174 (338)
220 PF06609 TRI12: Fungal trichot 98.5 1.6E-06 3.4E-11 90.5 15.0 175 351-527 37-221 (599)
221 TIGR00806 rfc RFC reduced fola 98.5 2.3E-06 5E-11 86.0 15.3 138 390-529 66-207 (511)
222 TIGR00805 oat sodium-independe 98.5 4.9E-07 1.1E-11 97.2 11.2 138 390-528 72-284 (633)
223 KOG3810|consensus 98.5 3.4E-06 7.5E-11 79.6 14.9 342 168-523 55-419 (433)
224 TIGR00926 2A1704 Peptide:H+ sy 98.5 1.8E-05 4E-10 84.6 22.4 141 145-288 16-178 (654)
225 TIGR02718 sider_RhtX_FptX side 98.5 1.2E-06 2.5E-11 89.3 13.0 144 140-286 231-385 (390)
226 KOG0253|consensus 98.5 2.8E-07 6E-12 87.6 7.4 129 165-293 391-520 (528)
227 TIGR01301 GPH_sucrose GPH fami 98.5 1.5E-05 3.3E-10 81.9 20.3 147 381-528 31-222 (477)
228 PF00083 Sugar_tr: Sugar (and 98.5 1.7E-09 3.8E-14 112.5 -9.1 139 390-529 50-196 (451)
229 KOG2532|consensus 98.5 2.4E-06 5.2E-11 87.7 13.8 135 390-524 77-215 (466)
230 PRK09848 glucuronide transport 98.4 7.9E-06 1.7E-10 84.9 17.0 114 153-266 262-384 (448)
231 KOG2504|consensus 98.4 4.8E-07 1E-11 94.0 7.8 152 138-292 319-476 (509)
232 TIGR00939 2a57 Equilibrative N 98.4 9.4E-05 2E-09 75.5 23.9 58 438-495 370-427 (437)
233 COG2223 NarK Nitrate/nitrite t 98.4 6.6E-06 1.4E-10 80.4 14.5 134 388-523 51-191 (417)
234 TIGR00896 CynX cyanate transpo 98.4 9.8E-06 2.1E-10 81.4 16.1 135 389-528 38-176 (355)
235 PF06963 FPN1: Ferroportin1 (F 98.4 0.00032 6.9E-09 71.0 26.5 328 158-495 41-411 (432)
236 KOG2533|consensus 98.3 8E-06 1.7E-10 84.1 13.3 141 388-529 83-232 (495)
237 TIGR01272 gluP glucose/galacto 98.3 5.8E-06 1.3E-10 81.0 11.8 124 147-276 173-299 (310)
238 KOG0637|consensus 98.3 1.2E-06 2.6E-11 86.0 6.4 125 140-267 55-202 (498)
239 PF13347 MFS_2: MFS/sugar tran 98.3 1.4E-05 3.1E-10 82.4 14.9 111 156-266 261-380 (428)
240 PRK10429 melibiose:sodium symp 98.2 3.3E-05 7.2E-10 80.8 16.2 114 153-266 264-389 (473)
241 KOG0252|consensus 98.2 9.1E-06 2E-10 80.0 10.6 103 389-492 87-196 (538)
242 COG3104 PTR2 Dipeptide/tripept 98.2 1.1E-05 2.4E-10 80.7 11.2 127 400-527 75-208 (498)
243 PF01306 LacY_symp: LacY proto 98.2 3E-05 6.5E-10 77.4 13.0 141 153-293 257-402 (412)
244 PRK09669 putative symporter Ya 98.1 4E-05 8.6E-10 79.5 14.3 111 156-266 265-384 (444)
245 PF13000 Acatn: Acetyl-coenzym 98.1 0.0002 4.3E-09 71.8 17.7 146 346-493 270-458 (544)
246 TIGR00788 fbt folate/biopterin 98.1 1.4E-05 3E-10 83.2 9.9 119 146-267 282-410 (468)
247 PF03825 Nuc_H_symport: Nucleo 98.1 4.1E-05 8.8E-10 77.6 12.5 141 153-293 241-397 (400)
248 COG0738 FucP Fucose permease [ 98.0 0.00031 6.7E-09 68.6 15.7 133 390-522 52-207 (422)
249 KOG4686|consensus 98.0 2.7E-05 5.9E-10 71.6 7.9 144 142-290 290-441 (459)
250 KOG3574|consensus 97.9 0.00036 7.8E-09 67.1 15.3 285 173-491 81-420 (510)
251 PF05978 UNC-93: Ion channel r 97.9 0.00012 2.6E-09 62.8 10.0 107 160-267 42-148 (156)
252 KOG3762|consensus 97.9 2.2E-05 4.7E-10 78.9 6.0 133 157-290 408-545 (618)
253 PF06779 DUF1228: Protein of u 97.9 1.2E-05 2.6E-10 60.4 3.1 72 138-212 13-84 (85)
254 COG2211 MelB Na+/melibiose sym 97.8 0.0003 6.6E-09 71.1 13.6 113 153-265 270-391 (467)
255 PRK11462 putative transporter; 97.8 0.00062 1.3E-08 70.8 15.8 109 156-264 264-381 (460)
256 COG2807 CynX Cyanate permease 97.8 0.00031 6.6E-09 67.6 11.5 145 140-288 231-381 (395)
257 KOG2816|consensus 97.7 0.00035 7.7E-09 71.6 12.5 132 394-529 70-204 (463)
258 PF06813 Nodulin-like: Nodulin 97.7 0.00085 1.9E-08 62.6 12.8 92 403-495 53-150 (250)
259 KOG2325|consensus 97.7 0.00035 7.6E-09 70.9 10.8 140 389-529 74-234 (488)
260 PF05631 DUF791: Protein of un 97.6 0.01 2.2E-07 57.7 19.8 138 390-529 73-221 (354)
261 PF03219 TLC: TLC ATP/ADP tran 97.6 0.034 7.4E-07 57.5 24.9 240 157-422 60-355 (491)
262 COG3202 ATP/ADP translocase [E 97.5 0.15 3.2E-06 51.7 26.2 254 143-425 49-361 (509)
263 KOG1237|consensus 97.4 0.024 5.2E-07 59.9 21.2 144 142-288 63-241 (571)
264 PF03209 PUCC: PUCC protein; 97.4 0.0043 9.4E-08 61.2 14.5 119 145-266 237-359 (403)
265 KOG1479|consensus 97.3 0.023 4.9E-07 56.3 18.5 59 437-495 340-398 (406)
266 PF00854 PTR2: POT family; In 97.3 0.0065 1.4E-07 61.3 14.9 104 186-289 2-120 (372)
267 KOG2563|consensus 97.1 0.03 6.5E-07 55.8 16.5 107 388-495 81-195 (480)
268 PF05978 UNC-93: Ion channel r 97.1 0.016 3.5E-07 49.8 12.7 104 390-495 41-144 (156)
269 PF01770 Folate_carrier: Reduc 97.0 0.042 9.1E-07 55.0 17.1 126 402-529 57-186 (412)
270 PF12832 MFS_1_like: MFS_1 lik 97.0 0.00084 1.8E-08 50.1 3.4 53 140-195 23-75 (77)
271 PF07672 MFS_Mycoplasma: Mycop 96.9 0.0093 2E-07 55.0 10.6 52 240-291 2-61 (267)
272 TIGR00769 AAA ADP/ATP carrier 96.8 0.22 4.7E-06 51.4 20.3 95 401-495 59-184 (472)
273 PF01733 Nucleoside_tran: Nucl 96.7 0.00046 1E-08 67.5 0.6 104 391-495 187-303 (309)
274 TIGR00926 2A1704 Peptide:H+ sy 96.5 0.064 1.4E-06 57.9 14.9 125 399-523 36-180 (654)
275 PF03092 BT1: BT1 family; Int 96.2 0.11 2.3E-06 53.6 14.5 144 381-526 17-176 (433)
276 COG0477 ProP Permeases of the 96.1 0.5 1.1E-05 45.3 17.8 106 389-495 42-151 (338)
277 PF02487 CLN3: CLN3 protein; 95.7 0.088 1.9E-06 52.7 10.5 111 154-268 280-395 (402)
278 PRK03612 spermidine synthase; 95.2 0.33 7.2E-06 51.1 13.4 111 153-264 48-165 (521)
279 KOG3098|consensus 95.2 0.46 9.9E-06 48.6 13.8 106 155-261 279-405 (461)
280 PF12832 MFS_1_like: MFS_1 lik 95.1 0.21 4.5E-06 37.2 8.4 59 367-425 13-74 (77)
281 PRK03612 spermidine synthase; 94.6 2.6 5.7E-05 44.5 18.0 48 447-495 117-164 (521)
282 KOG3880|consensus 94.6 0.17 3.6E-06 47.9 8.0 131 158-293 65-201 (409)
283 PF03137 OATP: Organic Anion T 94.3 0.0073 1.6E-07 63.6 -1.6 137 392-528 44-253 (539)
284 PF00854 PTR2: POT family; In 93.9 0.58 1.2E-05 47.2 11.3 107 417-523 2-121 (372)
285 KOG3626|consensus 92.3 0.4 8.7E-06 51.5 7.4 133 397-529 143-347 (735)
286 KOG3880|consensus 90.9 0.98 2.1E-05 43.0 7.5 111 155-270 288-404 (409)
287 KOG0637|consensus 90.8 0.45 9.8E-06 47.8 5.5 98 397-495 78-198 (498)
288 PF03219 TLC: TLC ATP/ADP tran 90.7 24 0.00051 36.9 20.0 97 399-495 72-199 (491)
289 KOG3097|consensus 89.2 23 0.0005 34.5 16.7 97 166-263 69-180 (390)
290 PF06963 FPN1: Ferroportin1 (F 88.3 5.7 0.00012 40.7 11.4 118 147-267 288-415 (432)
291 KOG1479|consensus 87.5 5.3 0.00012 40.0 10.3 114 153-266 280-401 (406)
292 TIGR00939 2a57 Equilibrative N 87.5 6.9 0.00015 40.3 11.6 111 155-266 307-430 (437)
293 KOG2601|consensus 83.1 23 0.0005 35.1 11.9 47 449-495 395-441 (503)
294 PF07672 MFS_Mycoplasma: Mycop 82.5 11 0.00023 35.3 9.2 103 157-260 143-255 (267)
295 KOG4332|consensus 81.5 12 0.00026 35.2 8.9 120 399-520 85-215 (454)
296 COG3202 ATP/ADP translocase [E 70.7 1.4E+02 0.003 31.1 19.3 97 399-495 75-203 (509)
297 PF06779 DUF1228: Protein of u 70.6 20 0.00043 27.1 6.2 50 389-439 30-79 (85)
298 KOG3574|consensus 67.0 97 0.0021 31.1 11.4 31 404-434 81-117 (510)
299 PF01733 Nucleoside_tran: Nucl 66.2 2.2 4.9E-05 41.6 0.5 108 159-266 186-306 (309)
300 KOG3810|consensus 62.1 24 0.00051 34.7 6.4 120 408-529 64-187 (433)
301 PF06123 CreD: Inner membrane 61.4 1.5E+02 0.0032 30.4 12.2 22 458-479 363-384 (430)
302 PF06912 DUF1275: Protein of u 59.4 1.4E+02 0.003 27.1 13.0 34 161-194 52-88 (209)
303 PF03547 Mem_trans: Membrane t 59.2 1.1E+02 0.0024 30.8 11.3 18 397-414 6-23 (385)
304 PF12805 FUSC-like: FUSC-like 58.1 1.3E+02 0.0028 28.9 10.9 37 189-225 3-40 (284)
305 PRK11715 inner membrane protei 57.8 1.8E+02 0.0039 29.8 12.1 22 459-480 370-391 (436)
306 COG5336 Uncharacterized protei 55.0 27 0.00058 27.4 4.4 35 158-192 45-80 (116)
307 TIGR01666 YCCS hypothetical me 52.0 3.3E+02 0.0071 30.1 13.8 52 174-225 42-98 (704)
308 KOG1237|consensus 51.6 96 0.0021 33.3 9.6 125 397-521 84-241 (571)
309 TIGR01667 YCCS_YHJK integral m 48.9 2.7E+02 0.0058 30.8 12.6 53 174-226 42-99 (701)
310 PF01528 Herpes_glycop: Herpes 47.1 3.1E+02 0.0067 27.5 11.9 40 453-495 247-290 (374)
311 PF06645 SPC12: Microsomal sig 44.1 63 0.0014 23.9 4.8 40 247-286 11-50 (76)
312 TIGR00836 amt ammonium transpo 43.1 3.8E+02 0.0082 27.3 15.6 30 466-495 301-330 (403)
313 PF08802 CytB6-F_Fe-S: Cytochr 42.5 33 0.00071 21.5 2.6 36 35-70 3-38 (39)
314 KOG2881|consensus 42.1 2.1E+02 0.0046 26.8 8.7 28 402-429 256-283 (294)
315 PF11947 DUF3464: Protein of u 41.2 85 0.0018 26.8 5.8 34 458-491 112-145 (153)
316 COG3619 Predicted membrane pro 40.3 3E+02 0.0065 25.4 13.3 65 155-219 55-126 (226)
317 PF11023 DUF2614: Protein of u 36.9 1.3E+02 0.0028 24.0 5.7 6 413-418 8-13 (114)
318 PRK02935 hypothetical protein; 36.2 1.4E+02 0.0031 23.4 5.7 13 411-423 7-19 (110)
319 PF06123 CreD: Inner membrane 34.4 3.5E+02 0.0075 27.8 10.0 49 241-289 348-396 (430)
320 COG4262 Predicted spermidine s 34.0 4.9E+02 0.011 26.0 13.7 27 441-467 106-132 (508)
321 PRK10929 putative mechanosensi 32.9 8.8E+02 0.019 28.6 20.4 21 252-272 679-699 (1109)
322 PRK11715 inner membrane protei 32.7 3.8E+02 0.0082 27.6 9.9 51 240-290 353-403 (436)
323 PF04281 Tom22: Mitochondrial 32.4 1.1E+02 0.0023 25.7 5.0 22 233-254 60-81 (137)
324 COG4262 Predicted spermidine s 31.6 5.4E+02 0.012 25.7 10.7 82 154-235 42-132 (508)
325 PF08997 UCR_6-4kD: Ubiquinol- 31.0 1.6E+02 0.0034 20.3 4.6 40 233-273 2-41 (56)
326 TIGR03644 marine_trans_1 proba 29.4 6.3E+02 0.014 25.8 22.3 27 469-495 317-343 (404)
327 PF13829 DUF4191: Domain of un 29.2 1.6E+02 0.0035 26.9 5.9 71 246-316 27-99 (224)
328 PF04346 EutH: Ethanolamine ut 29.0 5.8E+02 0.013 25.3 16.0 109 156-265 48-162 (354)
329 COG1268 BioY Uncharacterized c 28.6 1.2E+02 0.0025 27.0 4.8 24 161-184 88-111 (184)
330 PF02632 BioY: BioY family; I 28.3 1.2E+02 0.0026 25.8 4.8 25 162-186 60-84 (148)
331 PF08611 DUF1774: Fungal prote 28.1 2.9E+02 0.0063 21.5 7.1 22 500-521 49-70 (97)
332 PF06027 DUF914: Eukaryotic pr 28.0 6E+02 0.013 25.1 11.1 18 510-527 291-308 (334)
333 TIGR00986 3a0801s05tom22 mitoc 28.0 1.2E+02 0.0027 25.4 4.5 20 233-252 58-77 (145)
334 PF05297 Herpes_LMP1: Herpesvi 27.6 16 0.00035 34.0 -0.6 17 513-529 174-190 (381)
335 COG2962 RarD Predicted permeas 27.3 5.6E+02 0.012 24.6 10.5 83 347-433 62-144 (293)
336 PRK14230 camphor resistance pr 27.1 3.2E+02 0.0069 22.3 6.8 48 191-238 36-83 (119)
337 PRK14229 camphor resistance pr 27.0 2.8E+02 0.0061 22.1 6.4 24 215-238 56-79 (108)
338 PRK10263 DNA translocase FtsK; 27.0 1.2E+03 0.025 28.1 13.7 16 399-414 65-80 (1355)
339 PF07556 DUF1538: Protein of u 26.9 2.3E+02 0.005 25.8 6.5 87 206-293 60-148 (212)
340 PRK11469 hypothetical protein; 26.8 4.6E+02 0.0099 23.4 15.9 47 387-433 132-182 (188)
341 PF13536 EmrE: Multidrug resis 25.5 3.4E+02 0.0074 21.5 6.9 38 394-431 66-104 (113)
342 PRK15086 ethanolamine utilizat 25.2 6.9E+02 0.015 24.9 9.7 106 155-264 48-162 (372)
343 TIGR02230 ATPase_gene1 F0F1-AT 24.5 3.5E+02 0.0076 21.3 6.6 29 400-428 57-85 (100)
344 PF11947 DUF3464: Protein of u 23.6 2.2E+02 0.0048 24.3 5.4 51 206-259 95-145 (153)
345 KOG3097|consensus 23.5 7.3E+02 0.016 24.6 10.0 68 399-468 71-138 (390)
346 TIGR03802 Asp_Ala_antiprt aspa 22.8 9.2E+02 0.02 25.9 11.3 9 505-513 165-173 (562)
347 PF11299 DUF3100: Protein of u 22.2 1.3E+02 0.0028 27.7 4.0 95 140-259 127-221 (241)
348 PF03741 TerC: Integral membra 21.8 5.7E+02 0.012 22.7 14.0 26 223-248 11-36 (183)
349 PF07760 DUF1616: Protein of u 21.7 5.5E+02 0.012 24.6 8.6 31 211-242 22-52 (287)
350 PRK10697 DNA-binding transcrip 21.5 2.1E+02 0.0046 23.2 4.7 16 282-297 54-69 (118)
351 PRK00720 tatA twin arginine tr 21.0 1E+02 0.0022 22.9 2.5 18 35-52 1-18 (78)
352 COG4769 Predicted membrane pro 20.9 1.1E+02 0.0023 26.4 3.0 53 164-222 82-134 (181)
353 PF13000 Acatn: Acetyl-coenzym 20.7 3.8E+02 0.0082 28.2 7.4 48 210-257 407-454 (544)
No 1
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2e-58 Score=486.40 Aligned_cols=489 Identities=37% Similarity=0.666 Sum_probs=413.9
Q ss_pred CCCChHHHHHHHHHHhhhHHHHHHHHHhhhhccCCcccccCCcCCCCCChhhhhhccCCC--CCCCCCceeccCCCCCCc
Q psy17080 36 GDFGKWQFQLTLFLSLLNIPCTWHIFALTFQGASQDFWCTIPASLSTLTLDQWKNLSSIS--GVPYNPCNILDLDYSLPY 113 (565)
Q Consensus 36 g~~G~~Q~~~~~~~~~~~~~~~~~~~~~~f~~~~p~~~C~~~~~~~~~~~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~ 113 (565)
|+|||||++++++++++.++.++|.++.+|+..+|+|||+.|+. .+.+.++|++.+.+. ++++++|.+++.+...+.
T Consensus 1 g~~g~~q~~~~~~~~~~~~~~~~~~~~~~f~~~~p~~~c~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (505)
T TIGR00898 1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDA-ANLSSRCELNLTLPRLPDGRPESCLRFMVDQWANP 79 (505)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCCCc-ccCChHhHhceeccCCCCCCCCCCccccccchhhh
Confidence 79999999999999999999999999999999999999998843 345566688877664 346789988766521000
Q ss_pred -----cccccccCCCCCcccCCC-eEeCCCCcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhh
Q psy17080 114 -----STLLNIRRDVTAVRPCLQ-WTYDSSSFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKA 187 (565)
Q Consensus 114 -----~~~~~~~~~~~~~~~C~~-~~y~~~~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~ 187 (565)
..............+|.+ |.|+.+.+.+++.+|||++|++.++.+++.+++.+|.+++++++|+++||+|||++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~ 159 (505)
T TIGR00898 80 SLLGCEPLKLSDLGLAATEPCLDGWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKV 159 (505)
T ss_pred cccccccchhcccCCCCCCCCCCCcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHH
Confidence 000000001234567765 99998877899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh
Q psy17080 188 LMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS 267 (565)
Q Consensus 188 l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~ 267 (565)
++++.++.+++.++++++++++.+++.|++.|++.++..+...+++.|++|+++|+++.++...++.+|.++++.+++.+
T Consensus 160 ~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 239 (505)
T TIGR00898 160 LLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI 239 (505)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred cchhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccch
Q psy17080 268 HNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQV 347 (565)
Q Consensus 268 ~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (565)
.+||+.+++.+++.++..+..+++||+|+|+..+++.+++++.+++.++.|+...+.+..+...+ ++...++++.++
T Consensus 240 ~~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 316 (505)
T TIGR00898 240 PDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLE---KDLSSSKKQYSF 316 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhh---hhhhhccCCCcH
Confidence 88999999999988887777788999999999999999999999999988876554433221111 111111224578
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHH
Q psy17080 348 MDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIGGDVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAG 427 (565)
Q Consensus 348 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~ 427 (565)
++++++|.++..++...+.|+.....||+..++.+..+.+.+....+.++.++++.++.+++.||+|||+.+.++.++.+
T Consensus 317 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~ 396 (505)
T TIGR00898 317 LDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAG 396 (505)
T ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 89999999999999888889998899999999888888888888888899999999999999999999999999998888
Q ss_pred HHHHHHhhcCCch--HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy17080 428 LACLMTLGFAPGS--FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHMQSINIHF 505 (565)
Q Consensus 428 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~~~~~~~~~ 505 (565)
++++++. +.++. +...+..++.+++.+..++..+.+.+|++|++.|++++|+.++.+.+|++++|++......+...
T Consensus 397 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~ 475 (505)
T TIGR00898 397 VALLLLL-FVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFL 475 (505)
T ss_pred HHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhh
Confidence 8877776 44433 44455566677777788889999999999999999999999999999999999995566677788
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 506 PMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 506 ~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
++.+++++.++++++.+++|||++
T Consensus 476 ~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 476 PLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred HHHHHHHHHHHHHHHHHcCcCCCC
Confidence 899999999998888889999988
No 2
>KOG0255|consensus
Probab=100.00 E-value=3.6e-49 Score=416.70 Aligned_cols=496 Identities=38% Similarity=0.609 Sum_probs=406.9
Q ss_pred ChhhhHHhhcCCCChHHHHHHHHHHhhhHHHHHHHHHhhhhccCCcccccCCcCCCCCChhhhhhccCCCCCCCCCceec
Q psy17080 26 VPEDVINSAIGDFGKWQFQLTLFLSLLNIPCTWHIFALTFQGASQDFWCTIPASLSTLTLDQWKNLSSISGVPYNPCNIL 105 (565)
Q Consensus 26 ~~~~~l~~~~g~~G~~Q~~~~~~~~~~~~~~~~~~~~~~f~~~~p~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 105 (565)
+.|+++++ +|++|+||+....+.++...+.+.|.+..+|....|+|+|.. |..... ..++|+++
T Consensus 2 ~~~~~~~~-~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----------~~~~~~----~~~~c~~~ 65 (521)
T KOG0255|consen 2 DLDEILSS-VGDFGRYQKLLLLLLGLPSIFSALHSFAQIFLAFVPDHHCTE-----------WGCLND----AEDSCLVY 65 (521)
T ss_pred chHHHHHH-hcCCcHHHHHHHHHHHHHHhHHHHHHHHHHhhccCCCchhhh-----------hhcccC----Ccccceec
Confidence 46777776 999999999999999999999999999999999999988761 111100 33566654
Q ss_pred cC-CCCCCccccccccC---CCCCcccCC-CeEeCCCCcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccc
Q psy17080 106 DL-DYSLPYSTLLNIRR---DVTAVRPCL-QWTYDSSSFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSD 180 (565)
Q Consensus 106 ~~-~~~~~~~~~~~~~~---~~~~~~~C~-~~~y~~~~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~D 180 (565)
.. +++ .....++.. .......|. +|.|+.+....++..|++++|++.+...+..+++++|.++|++++|+++|
T Consensus 66 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD 143 (521)
T KOG0255|consen 66 WDPTLD--PANPLNWPSWKKWLLVIVICLDGWVYDYGSSVYSIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSD 143 (521)
T ss_pred ccCccC--cCCccccccccccccccccccceeEecCCCCcccccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHh
Confidence 32 111 000011110 112344554 69999888788889999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHH
Q psy17080 181 KFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAI 260 (565)
Q Consensus 181 r~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~ 260 (565)
|+|||++++.++++..++.+++++++|++.+++.|++.|++.++...+..+++.|++++++|+.+..+....+..|.+..
T Consensus 144 ~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~ 223 (521)
T KOG0255|consen 144 RFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLP 223 (521)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999666666676777
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHH-HHhhhhcc
Q psy17080 261 SGIAYYSHNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLK-ESVLSTNQ 339 (565)
Q Consensus 261 ~~l~~~~~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 339 (565)
+..+++..+||+.+++..++.++.++.+++.||||||+..+++.+++.+.++++++.|+............ ....+...
T Consensus 224 ~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~ 303 (521)
T KOG0255|consen 224 AGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLL 303 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhh
Confidence 77778888999999999999988888777778999999999999999999999999885443222111111 11222222
Q ss_pred ccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHH
Q psy17080 340 DVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIGGDVYLNTIISGIVEFPAIVISIFILLKMGRRRPL 419 (565)
Q Consensus 340 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l 419 (565)
..+++..+.++++.|++++.++...+.|+.....||++.+....++.+.+....+.+..+.++....+...|+.|||...
T Consensus 304 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~ 383 (521)
T KOG0255|consen 304 FTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPL 383 (521)
T ss_pred ccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHH
Confidence 23344668999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCchH--HHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy17080 420 CLTTLGAGLACLMTLGFAPGSF--ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 497 (565)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~ 497 (565)
..+.++.+++++.......... ...+...++.++.+.++...+.+.+|++|+..|+.+.+..++.+.+|++++|++..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~ 463 (521)
T KOG0255|consen 384 FLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPL 463 (521)
T ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988884433333 57777888889999999999999999999999999999999999999999999954
Q ss_pred HH-HhhhhhHHHHHHHHHHHHHHHH-hhcccCCC--CCccHHHhhh
Q psy17080 498 MQ-SINIHFPMGLLGVVGVLGGLSV-LLLPDTTG--LADNLHQLEN 539 (565)
Q Consensus 498 ~~-~~~~~~~~~~~~~~~~i~~~~~-~~l~et~~--~~~~~~~~~~ 539 (565)
.. ......++.+++.+..+.+++. +++|||++ +|++.+|.++
T Consensus 464 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~~ 509 (521)
T KOG0255|consen 464 LLRQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAEN 509 (521)
T ss_pred HHhhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHHh
Confidence 33 3334444555576776666655 89999999 8888888775
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=4.3e-44 Score=380.60 Aligned_cols=425 Identities=23% Similarity=0.352 Sum_probs=335.9
Q ss_pred CChhhhHHhhcCCCChHHHHHHHHHHhhhHHHHHHHHHhhhhccCCcccccCCcCCCCCChhhhhhccCCCCCCCCCcee
Q psy17080 25 DVPEDVINSAIGDFGKWQFQLTLFLSLLNIPCTWHIFALTFQGASQDFWCTIPASLSTLTLDQWKNLSSISGVPYNPCNI 104 (565)
Q Consensus 25 ~~~~~~l~~~~g~~G~~Q~~~~~~~~~~~~~~~~~~~~~~f~~~~p~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 104 (565)
..+|+++++ .| +|++|+++++++++..+..++......++
T Consensus 150 ~~~d~~l~~-~~-~~~~~~~l~~i~~l~~~~~g~d~~~is~i-------------------------------------- 189 (742)
T TIGR01299 150 QQYELIIQE-CG-HGRFQWALFFVLGLALMADGVEVFVVGFV-------------------------------------- 189 (742)
T ss_pred HHHHHHHHH-cC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------
Confidence 357888888 77 69999999998888887776655544443
Q ss_pred ccCCCCCCccccccccCCCCCcccCCCeEeCCCCcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccc
Q psy17080 105 LDLDYSLPYSTLLNIRRDVTAVRPCLQWTYDSSSFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGR 184 (565)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~C~~~~y~~~~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Gr 184 (565)
.|.+.+++++ +..+.+++.+++++|.++|++++|+++||+||
T Consensus 190 -----------------------------------lp~i~~~~gl---s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GR 231 (742)
T TIGR01299 190 -----------------------------------LPSAEKDLCI---PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGR 231 (742)
T ss_pred -----------------------------------HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 2333445566 66778999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHH
Q psy17080 185 KKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIA 264 (565)
Q Consensus 185 r~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~ 264 (565)
|+++++++++.++++++++++++++.++++|++.|++.++..+...+++.|++|+++|++..++...++.+|.++++.++
T Consensus 232 R~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la 311 (742)
T TIGR01299 232 KQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMA 311 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888765
Q ss_pred HHh----------------cchhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCC--chh-
Q psy17080 265 YYS----------------HNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKL--PLN- 325 (565)
Q Consensus 265 ~~~----------------~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~--~~~- 325 (565)
..+ .+||+++++.++++++.++..+++||||+|+..++|.+++.+.++++++.|++.. +..
T Consensus 312 ~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~ 391 (742)
T TIGR01299 312 WAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKV 391 (742)
T ss_pred HHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHH
Confidence 432 3699999999998888888888999999999999999999999999988775432 111
Q ss_pred HH-HHHHHHhhhh-----ccccC----------------cccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCc
Q psy17080 326 LE-KLLKESVLST-----NQDVG----------------KKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSN 383 (565)
Q Consensus 326 ~~-~~~~~~~~~~-----~~~~~----------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (565)
.. +..+.....+ +.... ...+++++|+ +.+++.++...+.|++..+.||++..+.+.
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~-~~~~~~tl~l~~~wf~~~~~yygl~~w~P~ 470 (742)
T TIGR01299 392 FSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFN-PEVREITIKLMGVWFTLSFGYYGLSVWFPD 470 (742)
T ss_pred HHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 0011100000 00000 0013556665 456777888888999988888887655331
Q ss_pred C----------------------------------------------C--------------------------------
Q psy17080 384 I----------------------------------------------G-------------------------------- 385 (565)
Q Consensus 384 ~----------------------------------------------~-------------------------------- 385 (565)
+ +
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 550 (742)
T TIGR01299 471 MIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCT 550 (742)
T ss_pred HHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccc
Confidence 1 0
Q ss_pred --------------------------------------------CcHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHH
Q psy17080 386 --------------------------------------------GDVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCL 421 (565)
Q Consensus 386 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~ 421 (565)
...+...++.+++.+++.+++++++||+|||+++++
T Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~ 630 (742)
T TIGR01299 551 FIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAG 630 (742)
T ss_pred hhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 001333556678889999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH-HHHH
Q psy17080 422 TTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW-HMQS 500 (565)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~-~~~~ 500 (565)
++++.+++++++. +.++....+++.++.+++.+..++..+++++|++|++.|++++|+.++.+++|++++|++. .+..
T Consensus 631 ~~~lsai~~ll~~-~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~ 709 (742)
T TIGR01299 631 SMVLSCISCFFLS-FGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVG 709 (742)
T ss_pred HHHHHHHHHHHHH-HHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888777 5555555555556667777778889999999999999999999999999999999999983 3434
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 501 INIHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 501 ~~~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
.+...++++++++.++++++.+++|||++
T Consensus 710 ~~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 710 ITKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 45677888888888888888888999987
No 4
>KOG0253|consensus
Probab=100.00 E-value=8.1e-44 Score=329.32 Aligned_cols=422 Identities=23% Similarity=0.418 Sum_probs=352.9
Q ss_pred ChhhhHHhhcCCCChHHHHHHHHHHhhhHHHHHHHHHhhhhccCCcccccCCcCCCCCChhhhhhccCCCCCCCCCceec
Q psy17080 26 VPEDVINSAIGDFGKWQFQLTLFLSLLNIPCTWHIFALTFQGASQDFWCTIPASLSTLTLDQWKNLSSISGVPYNPCNIL 105 (565)
Q Consensus 26 ~~~~~l~~~~g~~G~~Q~~~~~~~~~~~~~~~~~~~~~~f~~~~p~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 105 (565)
..||..+. +| |||||+.++++....|+..++.++...++..
T Consensus 62 tv~ea~~a-ig-fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~------------------------------------- 102 (528)
T KOG0253|consen 62 TVDEAMNA-IG-FGRFQWYLFFVAGMGWMADAMEMMLLSLILP------------------------------------- 102 (528)
T ss_pred eehhhhhh-cC-cccchhhHHHHhhhHHHHHHHHHHHHHHHHH-------------------------------------
Confidence 46777888 88 9999999999999999999888887777632
Q ss_pred cCCCCCCccccccccCCCCCcccCCCeEeCCCCcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccch
Q psy17080 106 DLDYSLPYSTLLNIRRDVTAVRPCLQWTYDSSSFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRK 185 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~C~~~~y~~~~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr 185 (565)
.....|++ +..+.+++......|..+++..+|.++|++|||
T Consensus 103 ------------------------------------~l~~~w~~---s~~q~~llt~~v~~gmllga~~w~l~~d~~grr 143 (528)
T KOG0253|consen 103 ------------------------------------ALDEVWGP---SEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRR 143 (528)
T ss_pred ------------------------------------HHHhhhch---hhhhhhHHHHHHHhhhhhhhhhhheehhhhhcc
Confidence 11222344 666778999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHH
Q psy17080 186 KALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAY 265 (565)
Q Consensus 186 ~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~ 265 (565)
+.+.+..+..++...+.++++|+.++.+.|.+.|+|.|+ .|...++-.|..|..+|...+.+. ..|.+|.+....+++
T Consensus 144 ~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law 221 (528)
T KOG0253|consen 144 KGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAW 221 (528)
T ss_pred hhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 888899999999999999887777 899999999888887
Q ss_pred Hh---cchhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHH------HHHHHHh--
Q psy17080 266 YS---HNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLE------KLLKESV-- 334 (565)
Q Consensus 266 ~~---~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~------~~~~~~~-- 334 (565)
.. .||||.....+.+..+...+.+++|||||++..+|+.++|.+.++++++.|+.+.+.... +..+++.
T Consensus 222 ~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~ 301 (528)
T KOG0253|consen 222 GVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDL 301 (528)
T ss_pred HHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhch
Confidence 64 499999999888888888888999999999999999999999999999999987553211 1111111
Q ss_pred --hhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcC---------------------------C
Q psy17080 335 --LSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNI---------------------------G 385 (565)
Q Consensus 335 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~ 385 (565)
.+....++...+..+++ .|.+++..+.....|+.+.+.||+..+....+ .
T Consensus 302 ~~~~~~a~ke~rg~~~nLl-sp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~ 380 (528)
T KOG0253|consen 302 DDSKSSAAKEVRGGTTNLL-SPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSV 380 (528)
T ss_pred hhhhhccccccccchHhhc-ChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccc
Confidence 01112233445566666 57899999999999999999999876432110 1
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy17080 386 GDVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYT 465 (565)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (565)
...|...++.++.+++|.++.++++||+|||+.+...+++.+++.+++. ...+.....++.+.+.+++.+.+.+.|+|+
T Consensus 381 ~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~-~c~~rn~~tvllf~arafisg~fqvaYvYt 459 (528)
T KOG0253|consen 381 AKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLT-TCKTRNAYTVLLFTARAFISGAFQVAYVYT 459 (528)
T ss_pred hhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHH-HhcCcchhHHHHHHHHHHHhchheEEEEec
Confidence 1236678889999999999999999999999999999999999888877 555555666777888999999999999999
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhcc-cCCC
Q psy17080 466 AELFPTKMRNLGVGASSVPAGVALILIPYLWHMQSINIHFPMGLLGVVGVLGGLSVLLLP-DTTG 529 (565)
Q Consensus 466 ~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~-et~~ 529 (565)
.|++|+..|+++.|.++.++++|+++.|++..........+..+++.++++++++..++| |||+
T Consensus 460 PEVyPTavRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 460 PEVYPTAVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred CcccchhhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 999999999999999999999999999999866677788899999999999999887766 7877
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3.9e-39 Score=338.25 Aligned_cols=428 Identities=20% Similarity=0.262 Sum_probs=297.7
Q ss_pred hHHhhcCCCChHHHHHHHHHHhhhHHHHHHHHHhhhhccCCcccccCCcCCCCCChhhhhhccCCCCCCCCCceeccCCC
Q psy17080 30 VINSAIGDFGKWQFQLTLFLSLLNIPCTWHIFALTFQGASQDFWCTIPASLSTLTLDQWKNLSSISGVPYNPCNILDLDY 109 (565)
Q Consensus 30 ~l~~~~g~~G~~Q~~~~~~~~~~~~~~~~~~~~~~f~~~~p~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 109 (565)
.+|+ .| ||++|+++++++++..+..++......++..... |+.
T Consensus 4 ~~~~-~~-~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~--~~~--------------------------------- 46 (502)
T TIGR00887 4 EADT-AP-FGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLG--YVY--------------------------------- 46 (502)
T ss_pred hhhc-cc-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHh---------------------------------
Confidence 3455 56 9999999999999999888888777666543211 100
Q ss_pred CCCccccccccCCCCCcccCCCeEeCCCCcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHH
Q psy17080 110 SLPYSTLLNIRRDVTAVRPCLQWTYDSSSFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALM 189 (565)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~C~~~~y~~~~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~ 189 (565)
| . .+.++ +..+.+++.+.+.+|.+++++++|+++||+|||+++.
T Consensus 47 ----------------------~-------~----~~~~~---~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 47 ----------------------Y-------H----GKGPL---PSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred ----------------------c-------c----Ccccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 0 0 00112 3445689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcch------hHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHH
Q psy17080 190 GSLVFQLVLGVLVAISPW------FELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGI 263 (565)
Q Consensus 190 ~~~~l~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l 263 (565)
.+.++..+++++++++++ ++.+++.|++.|++.|+..+...+++.|++|+++|+++.++.+....+|.++++.+
T Consensus 91 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~ 170 (502)
T TIGR00887 91 MELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIV 170 (502)
T ss_pred HHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998876 78999999999999999999999999999999999999999999999998888776
Q ss_pred HHHh--------------------------cchhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHH-HHHHHHHHHHH
Q psy17080 264 AYYS--------------------------HNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNK-EAMKILGDAAK 316 (565)
Q Consensus 264 ~~~~--------------------------~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~-~a~~~l~~~~~ 316 (565)
+..+ .+||+++.+.++++++.++..+++||||||+..++|.+ ++++.+++..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~ 250 (502)
T TIGR00887 171 ALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQ 250 (502)
T ss_pred HHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhc
Confidence 5431 26999999999998888888889999999999988874 46666666543
Q ss_pred HcCCCCchhHHHHHHHHhhhhccccCcccchhhccccH---HHHHHHHHHHHHHHHHHHhhhhhhhcc----CcCCCcH-
Q psy17080 317 FNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTP---LIRLISFVQYIIWFSVYLVYYGLVLNL----SNIGGDV- 388 (565)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~- 388 (565)
.+..+..++.. +. +++ ++..+.+++++++++ +.++.++.....++...+.+|+...+. ...+.+.
T Consensus 251 ~~~~~~~~~~~----~~-~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~ 323 (502)
T TIGR00887 251 VKIEAEPDEVE----KA-STA--VEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPP 323 (502)
T ss_pred cccccCccccc----ch-hcc--ccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCC
Confidence 22211111110 00 000 011123567777642 222334444445555555555532221 1122110
Q ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC--chHHHHHHHHHHH-
Q psy17080 389 --------------YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP--GSFITISLAMVGK- 451 (565)
Q Consensus 389 --------------~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~- 451 (565)
.....+..++.+++.++.+++.||+|||+.++.+..+.+++++++..... .........++..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 403 (502)
T TIGR00887 324 AATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQF 403 (502)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 01223344566778899999999999999988888777766655542211 1111111111211
Q ss_pred HHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHH----------hhhhhHHHHHHHHHHHHHH
Q psy17080 452 FAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQS----------INIHFPMGLLGVVGVLGGL 519 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~----------~~~~~~~~~~~~~~~i~~~ 519 (565)
++.....+..+.+.+|++|++.|+++.|+.+.++.+|++++|.+. ..+. .+....+.+++++++++.+
T Consensus 404 ~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 483 (502)
T TIGR00887 404 FANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL 483 (502)
T ss_pred HHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence 211223456778899999999999999999999999999999883 2231 2334578888888888777
Q ss_pred HHhhcccCCCCCccHHHhhh
Q psy17080 520 SVLLLPDTTGLADNLHQLEN 539 (565)
Q Consensus 520 ~~~~l~et~~~~~~~~~~~~ 539 (565)
..+++|||++ ++.||.++
T Consensus 484 ~~~~lpEt~~--~~leei~~ 501 (502)
T TIGR00887 484 FTLLIPETKG--KSLEELSG 501 (502)
T ss_pred HheEeccCCC--CCHHhhhC
Confidence 7778899999 66776653
No 6
>KOG0569|consensus
Probab=100.00 E-value=6.2e-37 Score=306.08 Aligned_cols=380 Identities=21% Similarity=0.300 Sum_probs=288.4
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc---chhHHHHHHHHHHhhhhhhhHhhhhh
Q psy17080 155 SLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS---PWFELYLVVRFFLGFFCVSIVFSGFV 231 (565)
Q Consensus 155 ~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~ 231 (565)
...+.+.+++.+|.++|+++.|+++||+|||..++++.++..++.++..++ +++.+++++|++.|+..|......+.
T Consensus 60 ~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pm 139 (485)
T KOG0569|consen 60 LLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPM 139 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 346889999999999999999999999999999999999888888777654 78999999999999999999999999
Q ss_pred hhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh-----cchhHHHHHHHHHHHHHHHHhhhcccchhHHHh-cCCHH
Q psy17080 232 LCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS-----HNWRLLQWVITIPTIFFLTLWWIMPESPRWLVS-MGRNK 305 (565)
Q Consensus 232 ~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~-----~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~-~~~~~ 305 (565)
++.|..|++.||....+.+.+..+|.+++..++... ..|++.+....+++++.++...++|||||||.. |++.+
T Consensus 140 yl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~ 219 (485)
T KOG0569|consen 140 YLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEE 219 (485)
T ss_pred HHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHH
Confidence 999999999999999999999999999987766432 369999999999999999999999999999999 89999
Q ss_pred HHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHH------HHhhhhhhh
Q psy17080 306 EAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSV------YLVYYGLVL 379 (565)
Q Consensus 306 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 379 (565)
||++.+++.++.++.+.. .+...++.++++..+++..+++++++++.+|+...+.+...+.. ...+|...+
T Consensus 220 ~A~~sl~~y~G~~~~~~~---~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i 296 (485)
T KOG0569|consen 220 EARKALKFYRGKEDVEAE---IEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSI 296 (485)
T ss_pred HHHHHHHHHhCCCcchhH---HHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHH
Confidence 999999998765432221 11122222223333346778999999999998766655544432 233444443
Q ss_pred ccC-cCCC-cHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcC--Cc---hHH---HHHHHHH
Q psy17080 380 NLS-NIGG-DVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFA--PG---SFI---TISLAMV 449 (565)
Q Consensus 380 ~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~--~~---~~~---~~~~~~~ 449 (565)
..+ .+.. .........+++.++.++++.+++||.|||++++.+..++.++.+++.... .+ .|. .++..++
T Consensus 297 ~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~ 376 (485)
T KOG0569|consen 297 FKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFL 376 (485)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 322 2222 234566677888999999999999999999999999988888777665321 11 122 1223333
Q ss_pred HHHHHHHH-HHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHhhhhhHHHHHHHHHHHHHH-HHhhcc
Q psy17080 450 GKFAISSS-NVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQSINIHFPMGLLGVVGVLGGL-SVLLLP 525 (565)
Q Consensus 450 ~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~~~~~~~~~~~~~~~i~~~-~~~~l~ 525 (565)
..++++.+ .|+.+-+.+|++|++.|+.+.++..++..+..++..+.. ..+..|. ..|+++.+.+++..+ ++..+|
T Consensus 377 ~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lP 455 (485)
T KOG0569|consen 377 FIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLP 455 (485)
T ss_pred HHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCc
Confidence 33333333 478899999999999999999999999998888776662 2334444 556666666655544 668999
Q ss_pred cCCCCCccHHHhhhc
Q psy17080 526 DTTGLADNLHQLEND 540 (565)
Q Consensus 526 et~~~~~~~~~~~~~ 540 (565)
|||+ ++.+|..+.
T Consensus 456 ETkg--r~~~eI~~~ 468 (485)
T KOG0569|consen 456 ETKG--RTPYEIIEE 468 (485)
T ss_pred ccCC--CCHHHHHHH
Confidence 9999 566655443
No 7
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=3e-33 Score=293.14 Aligned_cols=387 Identities=20% Similarity=0.299 Sum_probs=264.6
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc------------chh
Q psy17080 141 HTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS------------PWF 208 (565)
Q Consensus 141 ~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~------------~~~ 208 (565)
+....++++ +..+.+++.+++.++.+++++++|+++||+|||++++.+.++++++.++++++ +.+
T Consensus 44 ~~~~~~~~~---~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~ 120 (479)
T PRK10077 44 APQNLSESA---ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYV 120 (479)
T ss_pred ccccccccC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHH
Confidence 344556677 77889999999999999999999999999999999999999999998888763 235
Q ss_pred HHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh-----------cchhHHHHHH
Q psy17080 209 ELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS-----------HNWRLLQWVI 277 (565)
Q Consensus 209 ~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~-----------~~Wr~~~~~~ 277 (565)
+.+++.|+++|++.|+..+...+++.|++|+++|++++++.+.+..+|.++++.++..+ .+||+.|++.
T Consensus 121 ~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~ 200 (479)
T PRK10077 121 PEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASE 200 (479)
T ss_pred HHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999887765432 3899999998
Q ss_pred HHHHHHHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHH
Q psy17080 278 TIPTIFFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIR 357 (565)
Q Consensus 278 ~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 357 (565)
+++.++..+..+++||+|+|+..+++.+++++..++..+.+. .....++ ..+....+ ... .+..+.-. ..
T Consensus 201 ~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~---~~~---~~~~~~~~-~~ 270 (479)
T PRK10077 201 AIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL--ATQALQE-IKHSLDHG---RKT---GGKLLMFG-VG 270 (479)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh--HHHHHHH-HHHHHHHh---hhh---hhhhcchh-HH
Confidence 888777777778899999999888988888776666532111 0011111 11100000 000 01111110 11
Q ss_pred HHHHHHHHHHHHHH----HhhhhhhhccCcCCC---cHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHH
Q psy17080 358 LISFVQYIIWFSVY----LVYYGLVLNLSNIGG---DVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLAC 430 (565)
Q Consensus 358 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~ 430 (565)
..........+... ...|..+......+. .........++..+++.+++++++||+|||+.++.+.++.+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~ 350 (479)
T PRK10077 271 VIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGM 350 (479)
T ss_pred HHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHH
Confidence 11111111111111 111111222222222 23344556677888999999999999999999999888888777
Q ss_pred HHHhhcCC-ch--HHHHHHHHHHHHHHHHH-HHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH-H-------
Q psy17080 431 LMTLGFAP-GS--FITISLAMVGKFAISSS-NVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH-M------- 498 (565)
Q Consensus 431 ~~~~~~~~-~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~-~------- 498 (565)
+++..... +. .......++.+++.+.. .+..+.+++|.+|++.|+++.|+.+....+|.++++.+.. .
T Consensus 351 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~ 430 (479)
T PRK10077 351 FSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLV 430 (479)
T ss_pred HHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchh
Confidence 66542211 11 12222233333333322 2567899999999999999999999999999988876622 1
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHH-hhcccCCCCCccHHHhhhcCC
Q psy17080 499 QSINIHFPMGLLGVVGVLGGLSV-LLLPDTTGLADNLHQLENDVP 542 (565)
Q Consensus 499 ~~~~~~~~~~~~~~~~~i~~~~~-~~l~et~~~~~~~~~~~~~~~ 542 (565)
+..++...+.++++++++++++. ++.||+|+ ++.||.++..+
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--~~~~~~~~~~~ 473 (479)
T PRK10077 431 AHFHNGFSYWIYGCMGVLAALFMWKFVPETKG--KTLEEMEALWE 473 (479)
T ss_pred hhccCccHHHHHHHHHHHHHHHHHhccccCCC--CCHHHHHHHHh
Confidence 24556667777777766666554 56789988 56677666543
No 8
>KOG0254|consensus
Probab=100.00 E-value=7e-33 Score=290.93 Aligned_cols=385 Identities=21% Similarity=0.381 Sum_probs=281.4
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhc
Q psy17080 155 SLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCM 234 (565)
Q Consensus 155 ~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 234 (565)
.+.+++.+++.+|.++++++.|+++|++|||+.++++.+++.++.+++++++|+++++++|+++|+|.|+...+.+.+++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 35589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHHHHHHH
Q psy17080 235 ELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH----NWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNKEAMKI 310 (565)
Q Consensus 235 e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~----~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~ 310 (565)
|+.|++.||...+..+....+|.+++..+++... +||..+.+..+++++..+..+++||||+|+.++++.+++++.
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~ 248 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRS 248 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHH
Confidence 9999999999999999999999999977777764 799999999999988888888999999999999999999999
Q ss_pred HHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHH-HH-----HHHhhhhhhhccC-c
Q psy17080 311 LGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIW-FS-----VYLVYYGLVLNLS-N 383 (565)
Q Consensus 311 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~-~ 383 (565)
++++.+.++.+...+..+.. .....+......+..+.++++ |..++..+...... +. ....||...+... .
T Consensus 249 l~~l~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g 326 (513)
T KOG0254|consen 249 LKRLRGLSPEDVEVELELLK-IKLLVEAEVAEGKASWGELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAG 326 (513)
T ss_pred HHHHhCCCCcchHHHHHHHH-HHHHHhhhcccccccHHHhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcC
Confidence 99998855444333333322 111111111112223555665 44444443333222 22 2223343333221 2
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC---------c--hHHHHHHHHHHHH
Q psy17080 384 IGGDVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP---------G--SFITISLAMVGKF 452 (565)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~ 452 (565)
...+......+.++..+++.+++.++.||+|||+.++.+...+.++++++..... . .+..++..++...
T Consensus 327 ~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 406 (513)
T KOG0254|consen 327 LKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIF 406 (513)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHH
Confidence 2222266677788888999999999999999999999999998888877663211 0 1222222222222
Q ss_pred H-HHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH--HHHhhhhhHHHHHHHHHHHHHH--HHhhcccC
Q psy17080 453 A-ISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGL--SVLLLPDT 527 (565)
Q Consensus 453 ~-~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~--~~~~~~~~~~~~~~~~~~i~~~--~~~~l~et 527 (565)
. .....++.+.+.+|.+|.+.|+.+.++....+.+...+.-.... ....+....|.+++..+.+..+ ..+++|||
T Consensus 407 ~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 407 SFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPET 486 (513)
T ss_pred HHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccC
Confidence 2 22224677789999999999999999999888887766544422 2222224455555555555444 56889999
Q ss_pred CCCCccHHHhhhcCCC
Q psy17080 528 TGLADNLHQLENDVPI 543 (565)
Q Consensus 528 ~~~~~~~~~~~~~~~~ 543 (565)
|+ .++||.++....
T Consensus 487 kg--~sleei~~~~~~ 500 (513)
T KOG0254|consen 487 KG--LTLEEINELFEE 500 (513)
T ss_pred CC--CcHHHHHHHHHc
Confidence 99 778877765443
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=6.6e-32 Score=282.53 Aligned_cols=361 Identities=17% Similarity=0.183 Sum_probs=237.4
Q ss_pred ccceeeccccccCcch-hh-HH-HHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHH------
Q psy17080 140 GHTIISEWDLVCSNSS-LE-SL-AEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFEL------ 210 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~-~~-~l-~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~------ 210 (565)
.+.+.++|....++.. .. .+ +.++.++++.+|++++|+++||+|||+++..++++++++++++++++|++.
T Consensus 39 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~ 118 (490)
T PRK10642 39 AYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAP 118 (490)
T ss_pred HHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 4555666654322211 11 22 257888999999999999999999999999999999999999999999874
Q ss_pred --HHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHH-----------hcchhHHHHHH
Q psy17080 211 --YLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY-----------SHNWRLLQWVI 277 (565)
Q Consensus 211 --l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~-----------~~~Wr~~~~~~ 277 (565)
+++.|+++|++.|+.++...+++.|++|+++|+++.++...+..+|.++++.+... ..+||+.|++.
T Consensus 119 ~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~ 198 (490)
T PRK10642 119 ILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIA 198 (490)
T ss_pred HHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHH
Confidence 88999999999999999999999999999999999999998888888877655422 14899999998
Q ss_pred HHHHHHHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHH
Q psy17080 278 TIPTIFFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIR 357 (565)
Q Consensus 278 ~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 357 (565)
++++++.+++...+||+|+|...+++.++..+ +...+.++.++++++++ ..+
T Consensus 199 ~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~-~~~ 250 (490)
T PRK10642 199 LPLGIIGLYLRHALEETPAFQQHVDKLEQGDR---------------------------EGLQDGPKVSFKEIATK-HWR 250 (490)
T ss_pred HHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc---------------------------ccccccccCCHHHHHHH-hHH
Confidence 77766666666778999998643322111000 00000112235555543 111
Q ss_pred HHHHHHHHHHH----HHHHh-hhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHH
Q psy17080 358 LISFVQYIIWF----SVYLV-YYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLA 429 (565)
Q Consensus 358 ~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~ 429 (565)
.... ....++ ..+.. .+...+.....+.+. ........++.+++.++.+++.||+|||+.+..+.++..+.
T Consensus 251 ~~~~-~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~ 329 (490)
T PRK10642 251 SLLT-CIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVL 329 (490)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 1111 111111 11111 122222222333332 22333445667788889999999999999887776544332
Q ss_pred HHH-Hhh-cCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHh-hhh
Q psy17080 430 CLM-TLG-FAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQSI-NIH 504 (565)
Q Consensus 430 ~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~-~~~ 504 (565)
.+. +.. ...+.....+..++.+++.+...+....+..|++|++.|+++.|+.+..+.+++.++|++. ..+.. ++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~ 409 (490)
T PRK10642 330 AIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLM 409 (490)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 222 211 1222233333444555555556667778888999999999999986666677777888872 22332 345
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 505 FPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 505 ~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
.++.+..+.++++.+..+++||+++
T Consensus 410 ~~~~~~~~~~~i~~~~~~~~pes~~ 434 (490)
T PRK10642 410 MPAYYLMVVAVIGLITGVTMKETAN 434 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccC
Confidence 5666666677777777778899877
No 10
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.5e-31 Score=267.89 Aligned_cols=345 Identities=12% Similarity=0.041 Sum_probs=241.9
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+||++ +..+.|++.+++.+++++++++.|+++||+|||++++.+......+.+.....++++.+++.|+++|
T Consensus 14 lp~i~~~~~~---s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 90 (368)
T TIGR00903 14 LSLVAEDIDV---SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAA 90 (368)
T ss_pred HHHHHHHhCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 7889999999 8889999999999999999999999999999999877666555554433334479999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHH-HHhhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFL-TLWWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~-~~~~~~pesp 295 (565)
++.+. .......+.|++|+++|+++.++...+..+|.++++.++..+ .+||+.|++.++++++.. +.++++||+|
T Consensus 91 ~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 91 LGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred hHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99886 556666679999999999999999999999999998887765 499999999777765544 4466789998
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYY 375 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (565)
++.. +..+ ..+ ...++++++|+|.++...+..++..........
T Consensus 170 ~~~~---~~~~-------------------~~~--------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 213 (368)
T TIGR00903 170 FQAA---EGFG-------------------FKD--------------AVKEFGALAGRKDLWIIGAILGFGVALFDNLAI 213 (368)
T ss_pred CCCC---CCcc-------------------hHH--------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHH
Confidence 7521 0000 000 001256788898888777666655554443333
Q ss_pred hhhhccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCh---HHHH-HHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 376 GLVLNLSNIGGDVYLNTIISGIVEFPAIVISIFILLKMGRR---RPLC-LTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr---~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
..+.++.+.+.+.. ......+..+.+.+..+++.||..|| +... ...++.++.+..+. ...+......+..+.+
T Consensus 214 wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~l~~ 291 (368)
T TIGR00903 214 WLEAALRPAGLEDI-AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALA-FELNRLALFAFIGIAG 291 (368)
T ss_pred HHHHHHHHCCCChH-HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHH-HccccHHHHHHHHHHH
Confidence 33333343333322 23333444455556667888887653 3322 23333344333333 3333334444555566
Q ss_pred HHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhccc
Q psy17080 452 FAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHMQSINIHFPMGLLGVVGVLGGLSVLLLPD 526 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~e 526 (565)
++....++..+++.+|.+|++.|+++.|+.+..+++|++++|.+...-..+....|.++++..+++++..+.+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 292 LLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFISSAEAYFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred HhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 667777778889999999999999999999999999999999883221135666788888888877776654454
No 11
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.1e-38 Score=331.72 Aligned_cols=379 Identities=27% Similarity=0.447 Sum_probs=277.5
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc---hhHHHHHHHHHHhhhhhhhHhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP---WFELYLVVRFFLGFFCVSIVFSG 229 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~ 229 (565)
++.+.++..+..++|..+|++++|.++||+|||++++++.++..+++++.++++ +++.+.++|++.|++.|+..+..
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 456679999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cc---hhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCC
Q psy17080 230 FVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HN---WRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGR 303 (565)
Q Consensus 230 ~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~---Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~ 303 (565)
..++.|..|+++|++..++.+.++.+|.+++..++... .+ ||..+++..+++++.++..+++||||||+..|+|
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~ 203 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGR 203 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccc
Confidence 99999999999999999999999999999888776543 24 9999999999998888888899999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHH------HHhhhhh
Q psy17080 304 NKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSV------YLVYYGL 377 (565)
Q Consensus 304 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 377 (565)
.+||++.+++.++.+..+ ++..+ ..++.++.++.+.+++++++++..++.++......... ...+|..
T Consensus 204 ~~~A~~~l~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~ 277 (451)
T PF00083_consen 204 DEEAEKVLRKLRGKEIED--EEIEE----IKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSP 277 (451)
T ss_pred cccccccccccccccccc--ccccc----cccccccccccceeeeecccccccccccccccccccccccccccccccccc
Confidence 999999999855432211 11111 11111111112256788888765433333333222222 1222222
Q ss_pred hhccCcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHh---hcCCc-----hHHHHHHHH
Q psy17080 378 VLNLSNIGGDV-YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTL---GFAPG-----SFITISLAM 448 (565)
Q Consensus 378 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~ 448 (565)
...+..+.+. .....+.++..+++.+++.++.||+|||+.++.+..+++++++.+. ....+ ....+++..
T Consensus 278 -~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 356 (451)
T PF00083_consen 278 -SIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLA 356 (451)
T ss_pred -ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeee
Confidence 2222222222 3445566677788888888999999999999988888777766553 11121 122222222
Q ss_pred HHHHHHH-HHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHhhhhhHHHHHHHHHHHHHH-HHhhc
Q psy17080 449 VGKFAIS-SSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQSINIHFPMGLLGVVGVLGGL-SVLLL 524 (565)
Q Consensus 449 ~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~~~~~~~~~~~~~~~i~~~-~~~~l 524 (565)
+..+..+ ...+..+.+++|++|++.|+++.|+....++++++++|.+. ..+..+....+.+++++++++.+ ..+++
T Consensus 357 l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~l 436 (451)
T PF00083_consen 357 LFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFL 436 (451)
T ss_pred eccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEE
Confidence 2222223 23466778999999999999999999999999999888872 23333435566666666665554 45889
Q ss_pred ccCCCCCccHHHhhhc
Q psy17080 525 PDTTGLADNLHQLEND 540 (565)
Q Consensus 525 ~et~~~~~~~~~~~~~ 540 (565)
||||+ +++||.++.
T Consensus 437 pET~g--~~l~ei~~~ 450 (451)
T PF00083_consen 437 PETKG--KTLEEIQEM 450 (451)
T ss_pred eeCCC--CCHHHHHhh
Confidence 99999 788888764
No 12
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=7e-31 Score=275.19 Aligned_cols=388 Identities=23% Similarity=0.345 Sum_probs=263.9
Q ss_pred ccceeecccccc-----CcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc---chhHHH
Q psy17080 140 GHTIISEWDLVC-----SNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS---PWFELY 211 (565)
Q Consensus 140 ~~~i~~~~~l~c-----~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~---~~~~~l 211 (565)
.+.+..+++..- .+..+.+++.+++.++..++++++|+++||+|||++++.+.++.+++.+++.+. .+++.+
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (481)
T TIGR00879 51 LALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEML 130 (481)
T ss_pred hhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHH
Confidence 345555555510 136889999999999999999999999999999999999999999999988554 445689
Q ss_pred HHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHH---HHh---cchhHHHHHHHHHHHHHH
Q psy17080 212 LVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIA---YYS---HNWRLLQWVITIPTIFFL 285 (565)
Q Consensus 212 ~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~---~~~---~~Wr~~~~~~~~~~~~~~ 285 (565)
++.|++.|++.+...+....++.|++|+++|+++.++.+.+..+|.++++.++ ... .+||+.|++.++..++.+
T Consensus 131 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~ 210 (481)
T TIGR00879 131 IVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF 210 (481)
T ss_pred HHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988 432 489999999777777777
Q ss_pred HHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHH-HhhhhccccCcccchhhccccH--HHHHHHHH
Q psy17080 286 TLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKE-SVLSTNQDVGKKVQVMDLWRTP--LIRLISFV 362 (565)
Q Consensus 286 ~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~ 362 (565)
+..+++||+|+++..+++.+++++..++..+.+..+ .+..+.... ....+.+.+..+..+.++++.. ..+...+.
T Consensus 211 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (481)
T TIGR00879 211 LGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGED--KELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLG 288 (481)
T ss_pred HHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCc--HHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHH
Confidence 777889999999888888777666555443322211 111110000 0000000001111123333211 12222222
Q ss_pred HHHHHHHHH----HhhhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhh
Q psy17080 363 QYIIWFSVY----LVYYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLG 435 (565)
Q Consensus 363 ~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~ 435 (565)
..+.++... ...+..+......+.+. ........++.+++.++.+++.||++||+.+..+.++.+++++++..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 368 (481)
T TIGR00879 289 VVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGI 368 (481)
T ss_pred HHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 222222211 11122222233333332 44555667778889999999999999999988887777766655541
Q ss_pred ---c-CCc-----hHHHHHHHHHHHHHHHHH-HHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhh
Q psy17080 436 ---F-APG-----SFITISLAMVGKFAISSS-NVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINI 503 (565)
Q Consensus 436 ---~-~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~ 503 (565)
. ... .+.......+...+.+.. .+....+..|.+|++.|+++.|+.++...+|++++|.+ ...+..++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~ 448 (481)
T TIGR00879 369 LGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGV 448 (481)
T ss_pred HhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 1 111 222222222222233322 35566778999999999999999999999999999988 33455677
Q ss_pred hhHHHHHHHHHHHHHHHH-hhcccCCC
Q psy17080 504 HFPMGLLGVVGVLGGLSV-LLLPDTTG 529 (565)
Q Consensus 504 ~~~~~~~~~~~~i~~~~~-~~l~et~~ 529 (565)
...|++.++++++++++. ++.||+++
T Consensus 449 ~~~f~~~~~~~~~~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 449 GGVFIFFGGLNVLGLIFVYFFLPETKG 475 (481)
T ss_pred cceehhHHHHHHHHHHHHheecccCCC
Confidence 788888888887777665 56788776
No 13
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.4e-31 Score=251.46 Aligned_cols=362 Identities=16% Similarity=0.173 Sum_probs=270.4
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+|.++ +..+.|++.|++.+.|.++-++.|.++||.+.|..+.+++++.++.+++++++++.+.+.+..++.|
T Consensus 52 ~p~l~e~~~l---sk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng 128 (448)
T COG2271 52 MPALIEDGGL---SKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNG 128 (448)
T ss_pred cHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 6788888998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHH--HHh---cchhHHHHHHHHHHHHHHHH-hhhccc
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIA--YYS---HNWRLLQWVITIPTIFFLTL-WWIMPE 293 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~--~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pe 293 (565)
+..|...|.+...+..|+++++||+..++++++.++|..+.+++. ..+ .+||..|++.++.+++..+. ++..+|
T Consensus 129 ~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 129 WFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred HHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999988777 443 38999999998887665554 566777
Q ss_pred chhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHH-Hhhhhcc-ccCcccchhhccccHHHHHHHHHHHHHHHHHH
Q psy17080 294 SPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKE-SVLSTNQ-DVGKKVQVMDLWRTPLIRLISFVQYIIWFSVY 371 (565)
Q Consensus 294 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 371 (565)
+|+-.-. .+.+|-+ + +..+. .++++.+ ....+.-.+-+++||.+|.+.+...+.+..-+
T Consensus 209 ~Pqs~GL-P~ie~~~------------~------d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~ 269 (448)
T COG2271 209 RPQSEGL-PPIEEYR------------G------DPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRY 269 (448)
T ss_pred CccccCC-CCHHHhh------------c------CchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 7751100 0000000 0 00000 0000000 11122335567899999998888888887655
Q ss_pred Hhhh-hhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhc--CChHHHHHHHHHHHHHHHHHhhcCCch--HHH
Q psy17080 372 LVYY-GLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKM--GRRRPLCLTTLGAGLACLMTLGFAPGS--FIT 443 (565)
Q Consensus 372 ~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~--grr~~l~~~~~~~~~~~~~~~~~~~~~--~~~ 443 (565)
.... ...+..+..+.+ ......+.-.+.++|.+++|+++||+ |||....+.+.+....+++.....++. +..
T Consensus 270 gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~ 349 (448)
T COG2271 270 GINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLD 349 (448)
T ss_pred HHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHH
Confidence 4433 333333333333 34555666778899999999999996 677666555555544444444356654 555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHH-HHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHH
Q psy17080 444 ISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV-ALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLS 520 (565)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~l-g~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~ 520 (565)
.+++++.|+....-.-+.-..+.|..|++..|++.|+...++++ |...+... ...+..+|...|+++.+.++++.++
T Consensus 350 ~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~ll 429 (448)
T COG2271 350 AILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILL 429 (448)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHH
Confidence 66666667666665567778899999999999999999999999 66666554 3345578888898888888887776
Q ss_pred Hhh
Q psy17080 521 VLL 523 (565)
Q Consensus 521 ~~~ 523 (565)
.+.
T Consensus 430 l~~ 432 (448)
T COG2271 430 LLP 432 (448)
T ss_pred HHH
Confidence 543
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.6e-29 Score=260.57 Aligned_cols=328 Identities=19% Similarity=0.180 Sum_probs=216.3
Q ss_pred HHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhH--------HHHHHHHHHhhhhhhhHhhh
Q psy17080 158 SLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFE--------LYLVVRFFLGFFCVSIVFSG 229 (565)
Q Consensus 158 ~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~ 229 (565)
+.+.+..+++..+|++++|+++||+|||+++..+.++++++++++++++++. .+++.|+++|++.|+.++..
T Consensus 66 ~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~ 145 (432)
T PRK10406 66 AGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTS 145 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhH
Confidence 3344555666669999999999999999999999999999999999998874 58899999999999999999
Q ss_pred hhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHH-----------hcchhHHHHHHHHHHHHHHHHhhhcccchhHH
Q psy17080 230 FVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY-----------SHNWRLLQWVITIPTIFFLTLWWIMPESPRWL 298 (565)
Q Consensus 230 ~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~-----------~~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l 298 (565)
.+++.|++|+++|+++.++...+...|.++++.+... ..+||+.|++.++++++.+.....+||+|++.
T Consensus 146 ~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~ 225 (432)
T PRK10406 146 ATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQE 225 (432)
T ss_pred HHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHH
Confidence 9999999999999999999888888887776654322 24899999998888877666666678886531
Q ss_pred HhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHH-HHHHH-Hhhhh
Q psy17080 299 VSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYII-WFSVY-LVYYG 376 (565)
Q Consensus 299 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~-~~~~~ 376 (565)
..+ . ++..++++++|++..+...+...+. ....+ ...+.
T Consensus 226 ~~~----------------------------------~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 266 (432)
T PRK10406 226 TRA----------------------------------L-----KEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYM 266 (432)
T ss_pred Hhh----------------------------------h-----cccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 0012356677777655444333222 22111 22222
Q ss_pred hhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhh-c--CCchHHHHHHHHHH
Q psy17080 377 LVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLG-F--APGSFITISLAMVG 450 (565)
Q Consensus 377 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~ 450 (565)
..+..+..+.+. .....+..+...++.++.++++||++||+.+.+..++.++....+.. . ..+......+..+.
T Consensus 267 p~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (432)
T PRK10406 267 QKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCA 346 (432)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 222223334332 22333444556677788899999999999877665544333322211 1 11222222222333
Q ss_pred HHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHH-HHHHHHHH-HHHHHhh-hhhHHHHHHHHHHHHHHHHhhc
Q psy17080 451 KFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV-ALILIPYL-WHMQSIN-IHFPMGLLGVVGVLGGLSVLLL 524 (565)
Q Consensus 451 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~l-g~~i~p~i-~~~~~~~-~~~~~~~~~~~~~i~~~~~~~l 524 (565)
.+..+...+....+.+|.+|++.|+++.|+.+..+++ ++...|++ ..++..+ +...+++.++..+++.+..+++
T Consensus 347 ~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 347 LLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 3344444456778899999999999999999877664 34447776 3333334 3444555556666665555544
No 15
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-30 Score=249.32 Aligned_cols=341 Identities=19% Similarity=0.215 Sum_probs=274.3
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+|++. +....|+..|.|.+++.+++++...+.||+.||++++..+.++.++++++++++||+.++++|++.|
T Consensus 36 Lp~iA~dl~v---s~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g 112 (394)
T COG2814 36 LPPIAADLGV---SEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAG 112 (394)
T ss_pred hHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 7899999999 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
+..|..++...++..+..|+++|+++.++...+.+++.++|.+++.++ .|||+.|++.+..+++.++. +..+| |
T Consensus 113 ~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~ 190 (394)
T COG2814 113 LAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--P 190 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--C
Confidence 999999999999999999999999999999999999999999888776 48999999998887776655 56677 2
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYY 375 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (565)
+- .+++.+.+..+..+++|+|..+...+...+.....+..|.
T Consensus 191 ~~--------------------------------------~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ft 232 (394)
T COG2814 191 SE--------------------------------------ISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYT 232 (394)
T ss_pred cc--------------------------------------CCCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHH
Confidence 10 0001111122356688999999888888777776666555
Q ss_pred hhhhccCc-CCC---cHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 376 GLVLNLSN-IGG---DVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 376 ~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
.+...+++ .+. ...+..+.++++.++|..++|++.|| +.|+.+.....+.++..+.+.....+.+...+..++.+
T Consensus 233 Yi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg 311 (394)
T COG2814 233 YIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWG 311 (394)
T ss_pred hHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 44433333 232 34567778899999999999999999 88888888878887777777744455556666666677
Q ss_pred HHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhcc
Q psy17080 452 FAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLP 525 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~ 525 (565)
+.............++..| +.++.+.+++....++|..++..+ ..+++.++....++.+++.+++.++.+...
T Consensus 312 ~a~~~~~~~~~~~~a~~~p-~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 312 FAFSPALQGLQTRLARLAP-DAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHhhhhhhHHHHHhcccCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777666666677777444 667899999888888888877777 446678888888888888888777665543
No 16
>PRK09952 shikimate transporter; Provisional
Probab=99.98 E-value=1.2e-29 Score=261.64 Aligned_cols=335 Identities=19% Similarity=0.186 Sum_probs=229.8
Q ss_pred HHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhH--------HHHHHHHHHhhhhhhhHhhhhhh
Q psy17080 161 EMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFE--------LYLVVRFFLGFFCVSIVFSGFVL 232 (565)
Q Consensus 161 ~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~ 232 (565)
.++.+++..+|+++.|+++||+|||++++.+.++++++++++++++++. .+++.|+++|++.|+.++....+
T Consensus 70 ~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~ 149 (438)
T PRK09952 70 FGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALL 149 (438)
T ss_pred HHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHH
Confidence 3456677889999999999999999999999999999999999999987 58899999999999999999999
Q ss_pred hccccccchhHHHHHHhhhhhHHHHHHHHHHHHH-----------hcchhHHHHHHHHHHHHHHHHhhhcccchhHHHhc
Q psy17080 233 CMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY-----------SHNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSM 301 (565)
Q Consensus 233 i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~-----------~~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~ 301 (565)
+.|++|+++|++..+..+.+..+|.+++..+... ..+||+.|++.+++.++.......+||+|+|...+
T Consensus 150 ~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~ 229 (438)
T PRK09952 150 AVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQ 229 (438)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHH
Confidence 9999999999999999999999999887665432 24899999998887766555556689998764332
Q ss_pred CCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHH-HHHHHH-Hhhhhhhh
Q psy17080 302 GRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYI-IWFSVY-LVYYGLVL 379 (565)
Q Consensus 302 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~ 379 (565)
++.++. +++....+.++++++.+...+...+ ..+..+ ...+...+
T Consensus 230 ~~~~~~---------------------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 276 (438)
T PRK09952 230 HEQAAA---------------------------------KKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNY 276 (438)
T ss_pred hhcccc---------------------------------cccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111000 0000011124455544443322211 111111 11122222
Q ss_pred ccCcCCCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhh-c-CCch-HHHHHHHHHHHHH
Q psy17080 380 NLSNIGGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLG-F-APGS-FITISLAMVGKFA 453 (565)
Q Consensus 380 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~ 453 (565)
.....+.+.. ....+.++..+++.++.++++||+|||+.+..+.++..++.+.+.. . ..+. +......++.+++
T Consensus 277 ~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 356 (438)
T PRK09952 277 STQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIA 356 (438)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 2223333332 2233455666778889999999999999888776655544332221 1 1222 2323334455666
Q ss_pred HHHHHHHHHHhcccccchhhhhhHHHHHHHHH-HHHHHHHHHHH--HHHHh--hhhhHHHHHHHHHHHHHHHHhhcccCC
Q psy17080 454 ISSSNVIIPIYTAELFPTKMRNLGVGASSVPA-GVALILIPYLW--HMQSI--NIHFPMGLLGVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 454 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~-~lg~~i~p~i~--~~~~~--~~~~~~~~~~~~~~i~~~~~~~l~et~ 528 (565)
.+...+..+++..|.+|++.|+++.|+.+..+ .+|+.++|.+. ..+.. ++..++.+.+++++++.+..+.++|++
T Consensus 357 ~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 357 HDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 67667788899999999999999999976554 48889999882 23322 356677777777888877777777754
No 17
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.98 E-value=4.5e-30 Score=262.58 Aligned_cols=358 Identities=13% Similarity=0.189 Sum_probs=238.5
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.+.+.+|+++ +..+.|++.+++.+++.+++++.|+++||+|||+++..++++.+++++++++++|++.+++.|++.|
T Consensus 31 ~~~l~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 107 (412)
T TIGR02332 31 GLTMGKDLGL---SATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVG 107 (412)
T ss_pred HHhhHhhcCC---CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 5678899999 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---------cchhHHHHHHHHHHHHHHH-Hhh
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---------HNWRLLQWVITIPTIFFLT-LWW 289 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---------~~Wr~~~~~~~~~~~~~~~-~~~ 289 (565)
++.+...+....++.|++|+++|+++.++++.+..+|.++++.++..+ .+||+.|++.+++.++..+ .++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 108 IAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred HHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999998887653 3899999998888765544 456
Q ss_pred hcccchh---HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHH
Q psy17080 290 IMPESPR---WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYII 366 (565)
Q Consensus 290 ~~pesp~---~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (565)
++||+|+ |+. .++ ++..++..+.+..+.+... ...++.....+..+++++ ++.++...+..++.
T Consensus 188 ~~~~~p~~~~~l~----~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 254 (412)
T TIGR02332 188 WLDDSPDKAKWLD----EED-KKALKEMIDNDQLTLEQPE-------GAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCL 254 (412)
T ss_pred ccCCCcccCCCCC----HHH-HHHHHHHHHhccccccccc-------cccccccccHHHHHHHhc-ChHHHHHHHHHHHH
Confidence 7899984 221 111 1111111110110000000 000000000111234444 45555544444433
Q ss_pred HHHHHHhhhhhhhccCcC--CCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHH-HHHHHHHHHHHHHHHhhcCCch
Q psy17080 367 WFSVYLVYYGLVLNLSNI--GGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRP-LCLTTLGAGLACLMTLGFAPGS 440 (565)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~-l~~~~~~~~~~~~~~~~~~~~~ 440 (565)
...........+.++++. +.+ .........+..+++.++.+++.||++||+. ......+.+++..+.. ...+.
T Consensus 255 ~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~-~~~~~ 333 (412)
T TIGR02332 255 TNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLAS-ATDHN 333 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHH-hcCCH
Confidence 333322222233333332 222 2344556677788999999999999997764 3333333333332222 22222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHh-hhhhHHHHHHHHH
Q psy17080 441 FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQSI-NIHFPMGLLGVVG 514 (565)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~-~~~~~~~~~~~~~ 514 (565)
.......++..++.....+.......|.+|++.|+++.|+.+..+++|++++|.+. ..+.. ++...+.+.+++.
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 334 LIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 22222222223333333344556667889999999999999999999999999882 33444 3565666555543
No 18
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=8.1e-29 Score=255.62 Aligned_cols=333 Identities=16% Similarity=0.172 Sum_probs=229.8
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhh
Q psy17080 141 HTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGF 220 (565)
Q Consensus 141 ~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~ 220 (565)
+.+.+|+++ +..+.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|+
T Consensus 42 ~~i~~~~~~---s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 118 (426)
T PRK12307 42 YLIKADLGL---TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGM 118 (426)
T ss_pred HHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 455667777 77788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccchhH
Q psy17080 221 FCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPESPRW 297 (565)
Q Consensus 221 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~ 297 (565)
+.+...+....++.|++|+++|+++.++...+..+|.++++.+...+ .+||+.|++..++.++.+......||++++
T Consensus 119 g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~ 198 (426)
T PRK12307 119 GMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEW 198 (426)
T ss_pred HHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHH
Confidence 99999999999999999999999999999999999999988776543 489999988655544444333445776554
Q ss_pred HHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHH---HHHhh
Q psy17080 298 LVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFS---VYLVY 374 (565)
Q Consensus 298 l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~ 374 (565)
...+.+ ..++. ++...+.....++++++++.++.........+.. ....+
T Consensus 199 ~~~~~~------------~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (426)
T PRK12307 199 EEAKLS------------GKGKH---------------SQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIF 251 (426)
T ss_pred HHhhhh------------ccccc---------------cccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 211100 00000 0000000112456777877766544332222211 11111
Q ss_pred hhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 375 YGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 375 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
...+.+....+.+. .....+.+++.+++.++.+++.||++||+.+..+.++.++..+.+........... ..++.+
T Consensus 252 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 330 (426)
T PRK12307 252 GLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLL-GACLFG 330 (426)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHH-HHHHHH
Confidence 22222233334332 33345566778899999999999999999888887776665554442222222211 122222
Q ss_pred HH--HHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhh
Q psy17080 452 FA--ISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIH 504 (565)
Q Consensus 452 ~~--~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~ 504 (565)
.+ .....+....++.|.+|++.|+++.|+.+....+|+.++|.+ ...+..++.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~ 387 (426)
T PRK12307 331 LMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLG 387 (426)
T ss_pred HHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHH
Confidence 21 112234556778999999999999999999999999999998 333444433
No 19
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=6.4e-30 Score=259.18 Aligned_cols=347 Identities=13% Similarity=0.097 Sum_probs=252.4
Q ss_pred eEeCCCCcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHH
Q psy17080 132 WTYDSSSFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELY 211 (565)
Q Consensus 132 ~~y~~~~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l 211 (565)
..|+.+...|.+.+|+++ +..+.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (377)
T TIGR00890 18 YVYTWTLLAPPLGRYFGV---GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAAL 94 (377)
T ss_pred HHhhhhhHHHHHHHHhCC---CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 345556668999999999 88999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHH-h--cchhHHHHHHHHHHHHHHHH-
Q psy17080 212 LVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY-S--HNWRLLQWVITIPTIFFLTL- 287 (565)
Q Consensus 212 ~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~-~--~~Wr~~~~~~~~~~~~~~~~- 287 (565)
++.|++.|++.+...+.....+.|++| ++|+++.++...+..+|.++++.+... . .+||+.|++.++..++..+.
T Consensus 95 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 95 YLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred HHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888888888899986 679999999999999998775544433 2 48999999988877666555
Q ss_pred hhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHH
Q psy17080 288 WWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIW 367 (565)
Q Consensus 288 ~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 367 (565)
+++++|+|+.. .+ ++. +.+++..+.++.++++.++...+......
T Consensus 174 ~~~~~~~~~~~-~~------------------~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (377)
T TIGR00890 174 AFLIGYPPGQL-IK------------------TNI----------------EVSVKDYTVWEMLRTPQFWVLYLSFFLNA 218 (377)
T ss_pred HHheecCchhc-cc------------------cCc----------------ccchhhhhHHHHHcCccHHHHHHHHHHHh
Confidence 44455543200 00 000 00001112445667777665544433322
Q ss_pred HHHHHhhhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCch--HH
Q psy17080 368 FSVYLVYYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGS--FI 442 (565)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~--~~ 442 (565)
+...........+.++.+.+ ......+.++..+++.++.+++.||++||+.+.++..+.+++.+++. +.+.. ..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 297 (377)
T TIGR00890 219 VSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAML-FIPMLNDVL 297 (377)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH-HcccchhHH
Confidence 22111111111122333332 23445566778889999999999999999998888888777776665 33322 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHH
Q psy17080 443 TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGG 518 (565)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~ 518 (565)
.....++.+++.+...+....+..|.+|++.|+++.|+.+....+|..++|.+ ...+..++...+.+.+++.+++.
T Consensus 298 ~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 298 FLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 22334455566666666677889999999999999999999999999999988 34566778888888777766653
No 20
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=2.7e-28 Score=250.06 Aligned_cols=346 Identities=19% Similarity=0.204 Sum_probs=244.6
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++++ +..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus 38 ~~~~~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 114 (406)
T PRK11551 38 APRMAQEFGL---DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTG 114 (406)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 4556677787 7788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHH-Hhhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLT-LWWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~-~~~~~pesp 295 (565)
++.+...+...+++.|++|+++|+++.++...+..+|..+++.++... .+||+.|++.++..++..+ ...++||+|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 115 VGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred hhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999999999999999999999998887554 4799999987766544443 455689987
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhcccc---HHHHHHHHHHHHHHHHHHH
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRT---PLIRLISFVQYIIWFSVYL 372 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~ 372 (565)
++...+++.++.++. .+.+++. +..+...+..++.......
T Consensus 195 ~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (406)
T PRK11551 195 AFAQAAGAGKQRAPV------------------------------------LRALFGEGRATATLLLWISYFFTLIVLYF 238 (406)
T ss_pred hHHhccCcchhhhhh------------------------------------HHHHhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 653222111100000 0001111 1111111111111111111
Q ss_pred hhhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q psy17080 373 VYYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMV 449 (565)
Q Consensus 373 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (565)
.....+.+..+.+.+ ........+++.+++.++.+++.||+|||+.+..+.+..+++++.+. ..++.+...+..++
T Consensus 239 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 317 (406)
T PRK11551 239 LLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALA-AAPSFAGMLLAGFA 317 (406)
T ss_pred HHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHH
Confidence 111122222333332 34445566778889999999999999999988877666666655554 44554555555556
Q ss_pred HHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHh-hhhhHHHHHHHHHHHHHHHHhhcc
Q psy17080 450 GKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQSI-NIHFPMGLLGVVGVLGGLSVLLLP 525 (565)
Q Consensus 450 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~-~~~~~~~~~~~~~~i~~~~~~~l~ 525 (565)
.+++.+...+...++..|.+|++.|+++.|+.+....+|..++|.+. ..+.. ++...+...+.+.+++.++.+.+.
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 318 AGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 66666667788889999999999999999999999999999999983 23332 333344445555555555555443
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=1.1e-28 Score=252.81 Aligned_cols=344 Identities=15% Similarity=0.161 Sum_probs=231.7
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhh
Q psy17080 141 HTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGF 220 (565)
Q Consensus 141 ~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~ 220 (565)
+.+.+++++ +..+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++.++++++++++.+++.|++.|+
T Consensus 36 ~~l~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 112 (405)
T TIGR00891 36 AEVAGEFGL---TTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGI 112 (405)
T ss_pred HHHHHHhCC---ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 445566777 77888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---c--chhHHHHHHHHHHHHHHHHhhhcccch
Q psy17080 221 FCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---H--NWRLLQWVITIPTIFFLTLWWIMPESP 295 (565)
Q Consensus 221 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~--~Wr~~~~~~~~~~~~~~~~~~~~pesp 295 (565)
+.+...+...+++.|++|+++|+++.++.+.+..+|.++++.++..+ . +||+.|++.+++.++.++....+||++
T Consensus 113 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 192 (405)
T TIGR00891 113 GMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAE 192 (405)
T ss_pred hhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999999999999999999999988876653 2 499999987777766666667789987
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccH-H-HHHHHHHHHHHHHHH-HH
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTP-L-IRLISFVQYIIWFSV-YL 372 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~-~~ 372 (565)
++...+++.++.++..++..+.. . ...+.. ++.....++..+.+ . +........+..... ..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (405)
T TIGR00891 193 DWKEKHAGKALVRTMVDILYGGE--H---RIANIV----------MTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPI 257 (405)
T ss_pred hHHHHhhhhhhhhhHHHHHhccc--h---hhhhhh----------hhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 76433322222111111111000 0 000000 00000011111111 0 111111111111111 11
Q ss_pred hhhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q psy17080 373 VYYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMV 449 (565)
Q Consensus 373 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (565)
..+...+.....+.+. .......+++.+++.++.+++.||+|||+.+..+.++.++..+.......+.+...+..++
T Consensus 258 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (405)
T TIGR00891 258 QDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFF 337 (405)
T ss_pred hhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 1111222222333332 3344566778889999999999999999988877766544433333132333333333344
Q ss_pred HHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhh
Q psy17080 450 GKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSIN 502 (565)
Q Consensus 450 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~ 502 (565)
.++......+....+..|.+|++.|+++.|+.+....+|+.++|.+ ...+..+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 338 QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4555555567777889999999999999999999999999999998 3344444
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=8.3e-29 Score=252.16 Aligned_cols=337 Identities=13% Similarity=0.067 Sum_probs=248.2
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+|+|+ +..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++++++++++|++.+++.|+++|
T Consensus 32 ~~~l~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G 108 (390)
T PRK03545 32 LSDIAQSFHM---QTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIA 108 (390)
T ss_pred hHHHHhHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 5788999999 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+ .+||+.|++.++..++..+. ..++||.|
T Consensus 109 ~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 109 FAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999998999999999999999999999999999999999998887653 48999999988876665444 44456653
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHH-hh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYL-VY 374 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~ 374 (565)
+. +. + ...+.++++|+|.++......++....... ..
T Consensus 189 ~~-----~~-~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (390)
T PRK03545 189 SE-----HS-G------------------------------------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYS 226 (390)
T ss_pred CC-----Cc-c------------------------------------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 20 00 0 001234567777766554443332222221 11
Q ss_pred hhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 375 YGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 375 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
+..++..+..+.+ ........+++.+++.++.+++.||++||... .+..+.+++...+....++.+...+..++.+
T Consensus 227 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g 305 (390)
T PRK03545 227 YIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 2222222223322 33445566778899999999999999988654 4444444444333323344444455555666
Q ss_pred HHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhh
Q psy17080 452 FAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLL 523 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 523 (565)
++.....+.......+..| +.|+++.|+.+....+|..++|.+ ...+..++...+.+.+++.+++.+....
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHH
Confidence 6665555556677778777 578999999999999999999988 4456778888888888888777666543
No 23
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=5.2e-29 Score=259.37 Aligned_cols=364 Identities=13% Similarity=0.095 Sum_probs=243.2
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHh-----cchhHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAI-----SPWFELYLVV 214 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~-----~~~~~~l~~~ 214 (565)
.|.+.+|+++ +..+.|++.+++.+++.+++++.|+++||+|||+++..+.++++++.++.++ +++++.+++.
T Consensus 52 ~~~i~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 128 (467)
T PRK09556 52 QNDMISTYGL---STTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIAL 128 (467)
T ss_pred hHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 5678888999 8889999999999999999999999999999999999988888877776655 6899999999
Q ss_pred HHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh------cchhHHHHHHHHHHHHHHHH-
Q psy17080 215 RFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS------HNWRLLQWVITIPTIFFLTL- 287 (565)
Q Consensus 215 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~------~~Wr~~~~~~~~~~~~~~~~- 287 (565)
|+++|++.+...+....++.||+|+++|++++++...+..+|.++++.++... .+||..|.+.+++.++..+.
T Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~ 208 (467)
T PRK09556 129 WALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIG 208 (467)
T ss_pred HHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988776432 26999888877776655444
Q ss_pred hhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccc-hhhccccHHHHHHHHHHHHH
Q psy17080 288 WWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQ-VMDLWRTPLIRLISFVQYII 366 (565)
Q Consensus 288 ~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~ 366 (565)
+++++++|+..... +.++ ..+ +. ... +....+.++...... .+..+|+|.++...+..++.
T Consensus 209 ~~~~~~~p~~~~~~-~~~~---~~~------~~-~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 270 (467)
T PRK09556 209 LRYGSDSPEELGWG-KAEE---IFG------EP-ISE-------EDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFL 270 (467)
T ss_pred HHhCCCChhhcCCC-Chhh---ccc------Cc-cch-------hhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHH
Confidence 44556666421100 0000 000 00 000 000000000000011 12367888887776665554
Q ss_pred HHHHHH-hhhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhh-cCCchH
Q psy17080 367 WFSVYL-VYYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLG-FAPGSF 441 (565)
Q Consensus 367 ~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~-~~~~~~ 441 (565)
...... .++...+..+..+.+. ........++.+++.++.|+++||++||+.+.....+..++..++.. ...+.+
T Consensus 271 ~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (467)
T PRK09556 271 YIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEY 350 (467)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHH
Confidence 443322 2233333334455443 23344556678899999999999999988766554433333222221 222323
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHH-HHHHHHHH--HHHH------------HhhhhhH
Q psy17080 442 ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV-ALILIPYL--WHMQ------------SINIHFP 506 (565)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~l-g~~i~p~i--~~~~------------~~~~~~~ 506 (565)
...+..++.++............+.|.+|++.|+++.|+.+..+.+ |++++|.+ ...+ ..+|...
T Consensus 351 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~ 430 (467)
T PRK09556 351 MYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGT 430 (467)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHH
Confidence 3333334444333222233345677999999999999999999997 66888888 3344 3467778
Q ss_pred HHHHHHHHHHHHHHHhhc
Q psy17080 507 MGLLGVVGVLGGLSVLLL 524 (565)
Q Consensus 507 ~~~~~~~~~i~~~~~~~l 524 (565)
|.+++++.+++.+..+++
T Consensus 431 f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 431 FAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888878787776666544
No 24
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=1.5e-28 Score=249.99 Aligned_cols=345 Identities=10% Similarity=0.001 Sum_probs=245.0
Q ss_pred CCcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Q psy17080 137 SSFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRF 216 (565)
Q Consensus 137 ~~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~ 216 (565)
....|.+.+|+++ +..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++++++.+++.|+
T Consensus 29 ~~~lp~i~~~~~~---s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 29 GPLLPQLRQASGM---SFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred chhHHHHHHHhCC---CHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 3448899999999 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHHhhhcc
Q psy17080 217 FLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLTLWWIMP 292 (565)
Q Consensus 217 l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~~~~~~p 292 (565)
++|++.+...+....++.+++| ++|+++++++..+..+|..+++.++..+ .+||+.+.+.++..++.++.++...
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS 184 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999986 7899999999888777777777666543 4899988776665544433332221
Q ss_pred c-chhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHH
Q psy17080 293 E-SPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVY 371 (565)
Q Consensus 293 e-sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 371 (565)
+ .|+ + +++ ++...++.++++..+...+...+......
T Consensus 185 ~~~~~---------~-----------------------------~~~----~~~~~~~~l~~~~~~~l~~~~~~~~~~~~ 222 (393)
T PRK09705 185 AREVA---------S-----------------------------SHK----TTTTPVRVVFTPRAWTLGVYFGLINGGYA 222 (393)
T ss_pred cCCCc---------c-----------------------------ccC----CCcCCcccccCHhHHHHHHHHHHHHHHHH
Confidence 1 110 0 000 00112345566666555444433333222
Q ss_pred HhhhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHH
Q psy17080 372 LVYYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAM 448 (565)
Q Consensus 372 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (565)
......+.+..+.+.+ ......+.+++.+++.++.+++.||++||+.+..+..+.+++.+.+....++... ...+
T Consensus 223 ~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~ 300 (393)
T PRK09705 223 SLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV--LWAM 300 (393)
T ss_pred HHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH--HHHH
Confidence 2222222222233433 2345566778889999999999999999998888877777666655423222222 2233
Q ss_pred HHHHHHHHHHHHHHHhccccc-chhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhh-hhhHHHHHHHHHHHHHHH-Hhh
Q psy17080 449 VGKFAISSSNVIIPIYTAELF-PTKMRNLGVGASSVPAGVALILIPYL--WHMQSIN-IHFPMGLLGVVGVLGGLS-VLL 523 (565)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~-~~~~~~~~~~~~~i~~~~-~~~ 523 (565)
+.+++.+..++.......+.. |++.+++..|+.+..+.+++.++|.+ ...+..+ +...+.+.++++++..++ ..+
T Consensus 301 l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred HHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 456666666676666666666 46789999999999999999999988 3345443 566676666666655554 466
Q ss_pred cccCCC
Q psy17080 524 LPDTTG 529 (565)
Q Consensus 524 l~et~~ 529 (565)
.|||++
T Consensus 381 ~~~~~~ 386 (393)
T PRK09705 381 APARFP 386 (393)
T ss_pred cccccc
Confidence 788776
No 25
>KOG0252|consensus
Probab=99.97 E-value=5e-31 Score=252.61 Aligned_cols=372 Identities=21% Similarity=0.254 Sum_probs=269.3
Q ss_pred chhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc-------hhHHHHHHHHHHhhhhhhhH
Q psy17080 154 SSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP-------WFELYLVVRFFLGFFCVSIV 226 (565)
Q Consensus 154 ~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~ 226 (565)
+...+.+..+-.+|.++|++++|+++||+|||+++...++++.+++++++++. -.+++...|++.|+|.|+-+
T Consensus 83 s~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDY 162 (538)
T KOG0252|consen 83 SGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDY 162 (538)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCC
Confidence 34457889999999999999999999999999999999999999999888763 24678899999999999999
Q ss_pred hhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc------------------chhHHHHHHHHHHHHHHHHh
Q psy17080 227 FSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH------------------NWRLLQWVITIPTIFFLTLW 288 (565)
Q Consensus 227 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~------------------~Wr~~~~~~~~~~~~~~~~~ 288 (565)
|...+..+|....++||...+...+...+|.+.+..++..+. -||..+.+..++++..+...
T Consensus 163 PlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~R 242 (538)
T KOG0252|consen 163 PLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFR 242 (538)
T ss_pred cchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999988888888887776655431 39999999999999999999
Q ss_pred hhcccchhHHHhcC-CHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCccc---chhhccccHHHHHHHHHHH
Q psy17080 289 WIMPESPRWLVSMG-RNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKV---QVMDLWRTPLIRLISFVQY 364 (565)
Q Consensus 289 ~~~pesp~~l~~~~-~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~ 364 (565)
+.+|||+|+-.... +.+.|. +..++..+.++++ +...+...+.++. .+...|..+ --+.++...
T Consensus 243 l~M~Et~~Y~al~~~~~~~a~-------~d~~k~~~~~~~~----~~~~~~~~~~~~~~~~~F~~~f~~~-hg~~Llgt~ 310 (538)
T KOG0252|consen 243 LKMPETARYTALVSKKLKQAA-------GDMKKVLSVDIEA----ESTAESDVPPPSNSFGLFSRLFLRW-HGKHLLGTA 310 (538)
T ss_pred hcCCcchhHHHHhhcCHhhhh-------hccccccccccch----hhccccCCCCcccccchHHHHHHHH-HHHHHHHHH
Confidence 99999999863322 222222 1112222221111 1111111111111 233344333 336677788
Q ss_pred HHHHHHHHhhhhhhhccCcC----C----CcHH--------HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHH
Q psy17080 365 IIWFSVYLVYYGLVLNLSNI----G----GDVY--------LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGL 428 (565)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~----~----~~~~--------~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~ 428 (565)
..|+...+.+|...++.+.. + .+.+ .+..+.....++|..+..+++|++|||+..+.+++++.+
T Consensus 311 ~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i 390 (538)
T KOG0252|consen 311 GTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTI 390 (538)
T ss_pred HHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHH
Confidence 89998888888766654432 1 1111 222333344556777777899999999999999999999
Q ss_pred HHHHHhhcCCc-h---HHHHHHHHHHHHHHHHH-HHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH--HH--
Q psy17080 429 ACLMTLGFAPG-S---FITISLAMVGKFAISSS-NVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH--MQ-- 499 (565)
Q Consensus 429 ~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~--~~-- 499 (565)
..+.+. ...+ . ....++..+..++...+ ......+.+|.+|++.|+++.|+....+.+|++++.+... .+
T Consensus 391 ~~~~~~-~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~ 469 (538)
T KOG0252|consen 391 FFFVIA-GPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN 469 (538)
T ss_pred HHHHHc-CCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc
Confidence 998888 4333 2 22233333333332222 3456678899999999999999999999999999988733 33
Q ss_pred ---HhhhhhHHHHHHHHHHHHHHHHhhcccCCCCCccHHHhhhc
Q psy17080 500 ---SINIHFPMGLLGVVGVLGGLSVLLLPDTTGLADNLHQLEND 540 (565)
Q Consensus 500 ---~~~~~~~~~~~~~~~~i~~~~~~~l~et~~~~~~~~~~~~~ 540 (565)
..+....+++++.+.+++.+..+++|||++ +++||.++.
T Consensus 470 yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~--~~leei~~e 511 (538)
T KOG0252|consen 470 YPPNIGVRNVFIILAGCMLLGILFTLLIPETKG--KSLEEISNE 511 (538)
T ss_pred CCccccchHHHHHHHHHHHHhHheeEEeecccc--cCHHHhcCh
Confidence 356778899999999999999999999999 677776543
No 26
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=2.2e-27 Score=244.69 Aligned_cols=361 Identities=15% Similarity=0.112 Sum_probs=238.1
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++++ +..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++++++++++.+++.|++.|
T Consensus 46 ~~~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 122 (434)
T PRK11663 46 MPEMLADLGL---SRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNA 122 (434)
T ss_pred hHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4556667787 7788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHH-HHhhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFL-TLWWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~-~~~~~~pesp 295 (565)
++.|...+...+++.|++++++|++++++.+.+..+|.++++.+...+ .+||+.|++.+++.++.. +..+++||+|
T Consensus 123 ~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p 202 (434)
T PRK11663 123 FFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKP 202 (434)
T ss_pred HHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 999999999999999999999999999999999999999988776654 489999999887765443 4455678887
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccch-hhccccHHHHHHHHHHHHHHHHHHHh-
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQV-MDLWRTPLIRLISFVQYIIWFSVYLV- 373 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~- 373 (565)
++...+...++.++.. +...+.+....+.+..+ ...++++.++...+...+........
T Consensus 203 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (434)
T PRK11663 203 QAMGLPSVGEWRHDAL-------------------ELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAIN 263 (434)
T ss_pred hhcCCCCccccccccc-------------------ccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 6421110000000000 00000000000000001 12456777666555444333332222
Q ss_pred hhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhc--CChHHH-HHHHHHHHHHHHHHhhc-CCchHHHHHH
Q psy17080 374 YYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKM--GRRRPL-CLTTLGAGLACLMTLGF-APGSFITISL 446 (565)
Q Consensus 374 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~--grr~~l-~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 446 (565)
.+...+.....+.+. ........++.+++.++.+++.||+ ++|+.. ....+...+....+... ..+.......
T Consensus 264 ~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (434)
T PRK11663 264 DWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAAC 343 (434)
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 222223223344433 3344556677889999999999998 333322 22221111111111111 1222222222
Q ss_pred HHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHh
Q psy17080 447 AMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVL 522 (565)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~ 522 (565)
.+..+++.............|.+|++.|+++.|+.++...+|++++|.+ ...+..++...|.+.+++++++++..+
T Consensus 344 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 344 FFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 2222222222223345667899999999999999999999999999988 445667788888888888877766554
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=1.9e-28 Score=250.01 Aligned_cols=362 Identities=16% Similarity=0.180 Sum_probs=251.5
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++++ +..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus 17 ~~~~~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 93 (399)
T TIGR00893 17 APMLQEDLGL---SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLG 93 (399)
T ss_pred HHHHHHhhCC---ChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 5778889999 8889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
++.+...+....++.|++|+++|++..++...+..+|.++++.++..+ .+||+.|++.++..++..+. .++.||+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 94 AAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCC
Confidence 999999999999999999999999999999999999999998887753 48999999988776665544 44566665
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYY 375 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (565)
+.. +...++.++...+. ...+.+++++++..+...++++++|.++...+..++..........
T Consensus 174 ~~~--~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (399)
T TIGR00893 174 QKA--KWLTEEEKYIVVGG---------------LLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLT 236 (399)
T ss_pred Ccc--ccCCHHHHhhcchh---------------hccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHH
Confidence 311 00011110000000 0000001111222344567888888877776665555544433333
Q ss_pred hhhhcc-CcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChH--HHHHHH--HHHHH-HHHHHhhc--CCchHHHH
Q psy17080 376 GLVLNL-SNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRR--PLCLTT--LGAGL-ACLMTLGF--APGSFITI 444 (565)
Q Consensus 376 ~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~--~l~~~~--~~~~~-~~~~~~~~--~~~~~~~~ 444 (565)
..+.+. +..+.+ .........+..+++.++.+++.||++||+ ...... ....+ ..+..... .+..+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (399)
T TIGR00893 237 WFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAAL 316 (399)
T ss_pred HHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 333222 223333 234455566778889999999999999985 111111 11111 11111101 11223333
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHhh-hhhHHHHHHHHHHHHHHHH
Q psy17080 445 SLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQSIN-IHFPMGLLGVVGVLGGLSV 521 (565)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~~-~~~~~~~~~~~~~i~~~~~ 521 (565)
....+..++.+ ..+...++..|.+|++.|+++.|+.+....+|..++|.+. ..+..+ +...+.+.+++.+++.+..
T Consensus 317 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 317 ALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 33333344443 5788889999999999999999999999999999999883 344455 6777777777777766654
Q ss_pred h
Q psy17080 522 L 522 (565)
Q Consensus 522 ~ 522 (565)
+
T Consensus 396 ~ 396 (399)
T TIGR00893 396 L 396 (399)
T ss_pred H
Confidence 3
No 28
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=4.8e-28 Score=251.93 Aligned_cols=351 Identities=15% Similarity=0.071 Sum_probs=233.4
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.+.+.+|+++ +..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus 59 ~~~l~~~~gl---s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G 135 (476)
T PLN00028 59 LPIIRDNLNL---TKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIG 135 (476)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4566778888 7788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHH----HHHHHHh--------cchhHHHHHHHHHHHHHHHH
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAI----SGIAYYS--------HNWRLLQWVITIPTIFFLTL 287 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~----~~l~~~~--------~~Wr~~~~~~~~~~~~~~~~ 287 (565)
++.+... ....++.|++|+++|+++.++......+|..++ +.+...+ .+||+.|++.+++.++..+.
T Consensus 136 ~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~ 214 (476)
T PLN00028 136 FSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGIL 214 (476)
T ss_pred HHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHH
Confidence 9987643 456678999999999999999876555555544 3333221 37999999988887766655
Q ss_pred hhhccc-chhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHH
Q psy17080 288 WWIMPE-SPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYII 366 (565)
Q Consensus 288 ~~~~pe-sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (565)
.+++++ .|+ ++.++.+ + + .+.++......+++.++++..+...+..+..
T Consensus 215 ~~~~~~~~p~-----~~~~~~~-------~-~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (476)
T PLN00028 215 VLTLGQDLPD-----GNYRELK-------K-S-----------------GTMPKDSFSKVLRYGVTNYRTWILALTYGYS 264 (476)
T ss_pred HHHHcCcCCC-----CchhhHH-------h-c-----------------CccccccHHHHHHHHHcCchhHHHHHHHHHH
Confidence 555543 332 1100000 0 0 0000000112345566777766554443332
Q ss_pred HHHHHHhh-hhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCCh-------HHHHHHHHHHHHHHHHHhh
Q psy17080 367 WFSVYLVY-YGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRR-------RPLCLTTLGAGLACLMTLG 435 (565)
Q Consensus 367 ~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr-------~~l~~~~~~~~~~~~~~~~ 435 (565)
+....... +...+..+..+.+. .....+.+++.+++.+++|+++||++|| ....+..++.++.++++.
T Consensus 265 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~- 343 (476)
T PLN00028 265 FGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLG- 343 (476)
T ss_pred HHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhc-
Confidence 22221111 12222223334332 3445556678889999999999999865 222233333333333333
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhHHHHHHHHH
Q psy17080 436 FAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHMQ-SINIHFPMGLLGVVG 514 (565)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~~~-~~~~~~~~~~~~~~~ 514 (565)
...+.+...+.+++.+++.+...+..+.+..++.| +.++++.|+.+..+.+|++++|.+.... ..++...|.+.+++.
T Consensus 344 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~ 422 (476)
T PLN00028 344 RANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMI 422 (476)
T ss_pred ccchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHH
Confidence 33333333444455556655566667777777755 6899999999999999999999875432 235778888888888
Q ss_pred HHHHHHHhhccc
Q psy17080 515 VLGGLSVLLLPD 526 (565)
Q Consensus 515 ~i~~~~~~~l~e 526 (565)
++++++.++++.
T Consensus 423 ~i~~~~~~~~~~ 434 (476)
T PLN00028 423 IACTLPVAFIHF 434 (476)
T ss_pred HHHHHHHHheec
Confidence 888887766653
No 29
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=4.5e-27 Score=243.73 Aligned_cols=353 Identities=13% Similarity=0.091 Sum_probs=228.7
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHHhhhhhhhHhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS----PWFELYLVVRFFLGFFCVSIVFS 228 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~ 228 (565)
+..+.+++.+++.+++.+++++.|+++||+|||++++.+.++.+++.++++++ .+++.+++.|++.|++.+...+.
T Consensus 61 s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~ 140 (452)
T PRK11273 61 SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPP 140 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchH
Confidence 66788999999999999999999999999999999999999999999988875 37888999999999999988888
Q ss_pred hhhhhccccccchhHHHHHHhhhhhHHHHHH-HHHHHH---HhcchhHHHHHHHHHHHHH-HHHhhhcccchhHHHhcCC
Q psy17080 229 GFVLCMELVGGKWLTIMGVMYLFPVPVGYIA-ISGIAY---YSHNWRLLQWVITIPTIFF-LTLWWIMPESPRWLVSMGR 303 (565)
Q Consensus 229 ~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~-~~~l~~---~~~~Wr~~~~~~~~~~~~~-~~~~~~~pesp~~l~~~~~ 303 (565)
....+.|++|+++|+++.++.+.+..+|..+ ++.++. ...+||+.|++.+++.++. ++..+++||+|+....+.
T Consensus 141 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~- 219 (452)
T PRK11273 141 CGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPP- 219 (452)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCC-
Confidence 8888999999999999999999998888644 444322 2349999999987776554 445667788876421111
Q ss_pred HHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccc-hhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhcc-
Q psy17080 304 NKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQ-VMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNL- 381 (565)
Q Consensus 304 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 381 (565)
.++.++ + . +.+ ...++.++.+.+.. ...++|++.++...+...+............+.+.
T Consensus 220 ~~~~~~---~----~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~ 281 (452)
T PRK11273 220 IEEYKN---D----Y----PDD-------YNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLK 281 (452)
T ss_pred hhhhhh---c----c----ccc-------cccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111000 0 0 000 00000000000111 12367788887776666555544333322233333
Q ss_pred CcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhc--CChHHH-HHHHHHHHHHHHHHhhcCC-chHHHHHHHHHHHHHH
Q psy17080 382 SNIGGD---VYLNTIISGIVEFPAIVISIFILLKM--GRRRPL-CLTTLGAGLACLMTLGFAP-GSFITISLAMVGKFAI 454 (565)
Q Consensus 382 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~--grr~~l-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 454 (565)
+..+.+ ......+..+..+++.++.|+++||+ +||... .....+..++.+.+..... +.+...+..+..+...
T Consensus 282 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 361 (452)
T PRK11273 282 EVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLI 361 (452)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHH
Confidence 223333 23334456677788999999999998 555432 2222222333322221112 2222222333333333
Q ss_pred HHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHH-HHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhc
Q psy17080 455 SSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALIL-IPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLL 524 (565)
Q Consensus 455 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i-~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l 524 (565)
.........++.|.+|++.|+++.|+.+....+|+.+ +|.+ ...+..++...|.+.+++++++++....+
T Consensus 362 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 362 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 2222334456789999999999999999988888655 6876 44566788888888888888777665433
No 30
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=2e-27 Score=243.00 Aligned_cols=338 Identities=16% Similarity=0.094 Sum_probs=237.2
Q ss_pred eeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc--------chhHHHHHH
Q psy17080 143 IISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS--------PWFELYLVV 214 (565)
Q Consensus 143 i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~--------~~~~~l~~~ 214 (565)
+.+++++ +..+.|++.+++.+++.+++++.|+++||+|||++++.+.++.+++.+.+.++ .+++++++.
T Consensus 42 i~~~~g~---s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 118 (399)
T PRK05122 42 VHDQLGF---SAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLG 118 (399)
T ss_pred HHHhcCc---cHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHH
Confidence 5677888 88899999999999999999999999999999999999999888877766543 256789999
Q ss_pred HHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhc
Q psy17080 215 RFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIM 291 (565)
Q Consensus 215 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~ 291 (565)
|+++|++.+...+....++.|++++++|+++.++...+..+|.++++.++..+ .+||+.+++..+..++..+.....
T Consensus 119 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 198 (399)
T PRK05122 119 RLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLARPR 198 (399)
T ss_pred HHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999998888888888877654 489998887666554443333323
Q ss_pred ccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHH
Q psy17080 292 PESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVY 371 (565)
Q Consensus 292 pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 371 (565)
|++++ .+++ +.+.++.+++ .+.......+..+...
T Consensus 199 ~~~~~---~~~~----------------------------------------~~~~~~~~~~--~~~~~~~~~~~~~~~~ 233 (399)
T PRK05122 199 PAVPP---VKGE----------------------------------------RLPFRRVLGR--VWPYGMGLALASIGFG 233 (399)
T ss_pred CCCCC---CCcc----------------------------------------chhHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 33211 0000 0001111111 1111111111111111
Q ss_pred HhhhhhhhccCcCC-CcHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHH
Q psy17080 372 LVYYGLVLNLSNIG-GDVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVG 450 (565)
Q Consensus 372 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (565)
........+..+.+ .+........+++.+++.++.+++.||+++|+.+..+..+.+++.+++. ..++.+...+..++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 312 (399)
T PRK05122 234 TIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLW-LAPSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHH
Confidence 11000111111112 1223334456677788899999999999999988888877777766665 445555555556677
Q ss_pred HHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhcccCC
Q psy17080 451 KFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 451 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et~ 528 (565)
+++.+..++.......|..|++.|+++.|+.+....+|..++|.+ ...+..++...+.+.+++.+++.++..++++++
T Consensus 313 G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 313 GFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 777777777777778889999999999999999999998887776 344566788888888888888777766665543
Q ss_pred C
Q psy17080 529 G 529 (565)
Q Consensus 529 ~ 529 (565)
+
T Consensus 393 ~ 393 (399)
T PRK05122 393 P 393 (399)
T ss_pred c
Confidence 3
No 31
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=1.1e-27 Score=246.07 Aligned_cols=358 Identities=14% Similarity=0.024 Sum_probs=254.7
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHh-----cchhHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAI-----SPWFELYLVV 214 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~-----~~~~~~l~~~ 214 (565)
.|.+.++++. +..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+..+. .++++.+++.
T Consensus 40 ~~~~~~~~~~---s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 116 (417)
T PRK10489 40 VPVQIQMMTG---STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLL 116 (417)
T ss_pred HHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 4556667776 7788999999999999999999999999999999999988887777665442 5678999999
Q ss_pred HHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhc
Q psy17080 215 RFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIM 291 (565)
Q Consensus 215 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~ 291 (565)
|++.|++.+...+...+++.|++|+++|+++.++...+..+|..+++.++..+ .+|++.+++.++..++..+..+.+
T Consensus 117 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (417)
T PRK10489 117 GLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRL 196 (417)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC
Confidence 99999998888888899999999999999999999999999999998887654 479999988877777666666777
Q ss_pred ccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHH
Q psy17080 292 PESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVY 371 (565)
Q Consensus 292 pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 371 (565)
||+++.. +.+. .... +....++.++++|.++...+...+......
T Consensus 197 ~~~~~~~--~~~~-------------------~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (417)
T PRK10489 197 PALPPPP--QPRE-------------------HPLR--------------SLLAGFRFLLASPVVGGIALLGGLLTMASA 241 (417)
T ss_pred CCCCCCC--cccc-------------------cchH--------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHh
Confidence 7764310 0000 0000 001123446677776655544333222222
Q ss_pred HhhhhhhhccCc-CCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHH
Q psy17080 372 LVYYGLVLNLSN-IGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLA 447 (565)
Q Consensus 372 ~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (565)
...+ .+.+..+ .+.+. .......+++.+++.++.+++.||.++++.+..+.++.+++.+++. +.++.+...+..
T Consensus 242 ~~~~-~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 319 (417)
T PRK10489 242 VRVL-YPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFG-LMPMWILAVLCL 319 (417)
T ss_pred HHHh-hHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHH-ccchHHHHHHHH
Confidence 1112 2222232 34332 3344556677888899999999998777777777777766666555 445444445555
Q ss_pred HHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHH-HHHHHhhc
Q psy17080 448 MVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVL-GGLSVLLL 524 (565)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i-~~~~~~~l 524 (565)
++.+++.+...+...++..|..|++.|+++.|+.+....+|..++|.+ ...+..+....+.+.+++.++ +.+....+
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 666677666667777889999999999999999999999999999998 344556766677766665555 44455777
Q ss_pred ccCCCCCccHHHhhh
Q psy17080 525 PDTTGLADNLHQLEN 539 (565)
Q Consensus 525 ~et~~~~~~~~~~~~ 539 (565)
|++|+ .+.||.|+
T Consensus 400 ~~~~~--~~~~~~~~ 412 (417)
T PRK10489 400 GELRR--FRQTPPEV 412 (417)
T ss_pred ccccc--cccccccC
Confidence 88887 34444433
No 32
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=1e-26 Score=237.61 Aligned_cols=342 Identities=20% Similarity=0.272 Sum_probs=237.4
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhh
Q psy17080 141 HTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGF 220 (565)
Q Consensus 141 ~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~ 220 (565)
|.+.+++++ +..+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++..++++++.+++.|++.|+
T Consensus 41 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 117 (398)
T TIGR00895 41 PAISAEWGL---DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGL 117 (398)
T ss_pred HHHhhccCC---CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhc
Confidence 334455666 67778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHH-HHHHHHHhhhcccchh
Q psy17080 221 FCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIP-TIFFLTLWWIMPESPR 296 (565)
Q Consensus 221 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~-~~~~~~~~~~~pesp~ 296 (565)
+.+...+...+++.|++|+++|+++.++...+..+|..+++.++..+ .+||+.+++.++. .+..++..+++||+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 118 GLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESID 197 (398)
T ss_pred ccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence 99999999999999999999999999999999999999998887654 4899999887644 4444455677899988
Q ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhcccc-CcccchhhccccHHHHHHHH---HHHHHHHHHHH
Q psy17080 297 WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDV-GKKVQVMDLWRTPLIRLISF---VQYIIWFSVYL 372 (565)
Q Consensus 297 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~ 372 (565)
+...+ +.+++++..++.......+...+. .++..+. ..+...+.+++.+..+.... ...+.......
T Consensus 198 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (398)
T TIGR00895 198 FLVSK-RPETVRRIVNAIAPQMQAEAQSAL--------PEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYF 268 (398)
T ss_pred HHHhc-CHHHHHHHHHHHHHhccccccccc--------cccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 76555 444444444443322211110000 0000000 01111222333332222211 11111111111
Q ss_pred hhhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q psy17080 373 VYYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMV 449 (565)
Q Consensus 373 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (565)
.....++.....+.+ .........++.+++.++.+++.||++||+.. ....+.++...++.....+.+......++
T Consensus 269 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (398)
T TIGR00895 269 LTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTA-LLLLLGAVFAVLVGSTLFSPTLLLLLGAI 347 (398)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH-HHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 111122333333333 23445566778889999999999999999444 34444444443333223444555666777
Q ss_pred HHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 450 GKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 450 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.+++.+...+...++..|.+|++.|+++.|+.+.+..+|..++|.+
T Consensus 348 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 393 (398)
T TIGR00895 348 AGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPIL 393 (398)
T ss_pred HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888889999999999999999999999999999999999987
No 33
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=1.6e-26 Score=234.98 Aligned_cols=333 Identities=15% Similarity=0.147 Sum_probs=239.3
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++++ +..+.++..+++.++..+++++.|+++||+|||++++.+.++.+++.++++++++++.+++.|+++|
T Consensus 43 l~~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 119 (394)
T PRK10213 43 LTPMAQDLGI---SEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLG 119 (394)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 5678889999 8889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
++.+...+...+++.|++|+++|+++.++...+.++|.++++.++..+ .+||+.|++.++.+++..+. ...+||+|
T Consensus 120 ~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 120 LALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999999999999999999999999888765 48999999987766554433 33466653
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHh-h
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLV-Y 374 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~ 374 (565)
+. + + +.....++.+|+|.++...+..++........ .
T Consensus 200 ~~-----~-~------------------------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 237 (394)
T PRK10213 200 GE-----P-S------------------------------------HQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFT 237 (394)
T ss_pred cc-----c-c------------------------------------cchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 20 0 0 00012345677887776555433333322211 1
Q ss_pred hhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 375 YGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 375 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
+..+.+.+..+.+. .......+++.+++.++.+++.||.+++.......+..+..+++.. ..++.+......++.+
T Consensus 238 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~l~G 316 (394)
T PRK10213 238 YIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTL-WGSDKIVATGVAIIWG 316 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 22233344444333 3445556677888899999999996544333333332333333333 3344455555666777
Q ss_pred HHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHH
Q psy17080 452 FAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGL 519 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~ 519 (565)
++.+...+...+++.+..|+ .++...+.......+|..++|.+ ...+..++...+...+++.++..+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HHHHhhhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHH
Confidence 78877777777788888874 45666677777778888888888 344556666666666655544443
No 34
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=1.5e-26 Score=234.53 Aligned_cols=339 Identities=15% Similarity=0.167 Sum_probs=237.8
Q ss_pred eeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHH-HHHHHHHHHHHHHhcchhHHHHHHHHHHhhh
Q psy17080 143 IISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMG-SLVFQLVLGVLVAISPWFELYLVVRFFLGFF 221 (565)
Q Consensus 143 i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~-~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~ 221 (565)
+.+++++ +..+.|++.+++.++..+.+++.|.++||+||||.++. +.++..++.++++++++++.+++.|++.|.+
T Consensus 24 l~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 100 (375)
T TIGR00899 24 LSEEVRA---RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSF 100 (375)
T ss_pred HHcccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhh
Confidence 5678898 88899999999999999999999999999999887654 5666677788889999999999999999988
Q ss_pred hhhhHhhhhhhhccccccchhHHH--HHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 222 CVSIVFSGFVLCMELVGGKWLTIM--GVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 222 ~~~~~~~~~~~i~e~~~~~~r~~~--~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
.+...+...+++.|+.++++|++. .+....+.++|.++++.++..+ .+||+.|++.++..++..+. ++++||+|
T Consensus 101 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 101 ASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred hhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 888888888888999887777644 5667777788888888776654 38999999988876665554 45588876
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYY 375 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (565)
++...+ + ...+.++.++++.++......++.+........
T Consensus 181 ~~~~~~----~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (375)
T TIGR00899 181 RGAPGA----L------------------------------------TRLEVRGLLASRDTRLLFVACTLMWGCNILYII 220 (375)
T ss_pred cCcccc----c------------------------------------CcchhhhhhcCcchHHHHHHHHHHHHHHHHHHh
Confidence 421000 0 000122345566655554444444443222222
Q ss_pred hhhhc-cCcCCCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 376 GLVLN-LSNIGGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 376 ~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
..+.+ .+..+.+.. .......+..+++.++.+++.||+|||+.+..+.++..+....+. ..++.+......++.+
T Consensus 221 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 299 (375)
T TIGR00899 221 NMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLA-ADNSLWALLMLQLLNA 299 (375)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 22222 223333332 222233445667788999999999999988877665555444433 3333444444555667
Q ss_pred HHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhccc
Q psy17080 452 FAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLPD 526 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~e 526 (565)
++.+...+....+..|..|++ ++++.|+.+....+|..++|.+ ...+..++...+.+.+++.+++.++.++++|
T Consensus 300 ~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 300 IFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 777777778888889998865 5699999999999999999988 3345667888888888888887777666543
No 35
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=3.2e-26 Score=241.02 Aligned_cols=370 Identities=15% Similarity=0.166 Sum_probs=230.9
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.+.+.+++|+ +..+.+++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.++.+++++++.+++.|++.|
T Consensus 43 ~~~i~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (496)
T PRK03893 43 LTEVQGEFGL---TTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIG 119 (496)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3455667777 7778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccchh
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPESPR 296 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pesp~ 296 (565)
++.+...+....++.|++++++|+++.++...+..+|.++++.++..+ .+||+.|++..++.++.++....+||+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~ 199 (496)
T PRK03893 120 MGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAED 199 (496)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 999999999999999999999999999999999999999998887654 48999998866655555555566788876
Q ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchh----------------hccccHHHHHHH
Q psy17080 297 WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVM----------------DLWRTPLIRLIS 360 (565)
Q Consensus 297 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~l~~~~~~~~~~ 360 (565)
+...+++.++.++..+...+.+...................... .....+. ...+.+. +...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 277 (496)
T PRK03893 200 WKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAG-NLQNAAIVAVLGLLCAAIFISFMVQSSGKR-WPTG 277 (496)
T ss_pred hhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHh-hhcchhHHHHHHHHHHHHHHHHHHHhcccc-hhHH
Confidence 54332221111111111000000000000000000000000000 0000000 0000000 0000
Q ss_pred HHHHHHHHHHHH----hhhhhhhcc-CcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHH
Q psy17080 361 FVQYIIWFSVYL----VYYGLVLNL-SNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLM 432 (565)
Q Consensus 361 ~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~ 432 (565)
.......+.... .....+.+. ...+.+. ........++.+++.++.+++.||+|||+.+..+.++.++..++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 357 (496)
T PRK03893 278 VMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIP 357 (496)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 000000000000 011122222 3444333 34455566778889999999999999999888777666655544
Q ss_pred HhhcCCchH-HHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHH
Q psy17080 433 TLGFAPGSF-ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGL 509 (565)
Q Consensus 433 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~ 509 (565)
+........ ......++.++......+....+..|.+|++.|++++|+.+....+|+.++|.+ ...+..++...+.+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~ 437 (496)
T PRK03893 358 VFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALAS 437 (496)
T ss_pred HhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHH
Confidence 431222222 222222222222222345566788999999999999999999999999999988 33455566655555
Q ss_pred HHHHH
Q psy17080 510 LGVVG 514 (565)
Q Consensus 510 ~~~~~ 514 (565)
.++..
T Consensus 438 ~~~~~ 442 (496)
T PRK03893 438 LSFSL 442 (496)
T ss_pred HHHHH
Confidence 44433
No 36
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=4.6e-27 Score=245.09 Aligned_cols=359 Identities=12% Similarity=0.115 Sum_probs=241.1
Q ss_pred eeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc--chhHHHHHHHHHHhhh
Q psy17080 144 ISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS--PWFELYLVVRFFLGFF 221 (565)
Q Consensus 144 ~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~--~~~~~l~~~r~l~G~~ 221 (565)
..|+++ +..+.|++.+++.+++.+++++.|+++||+|||+++..+.++++++++++.++ .+++.+++.|+++|++
T Consensus 68 ~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 68 NPNFKW---SGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCC---CHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHh
Confidence 346788 88889999999999999999999999999999999999999999998887554 5688899999999999
Q ss_pred hhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHHhh-hcccchh
Q psy17080 222 CVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLTLWW-IMPESPR 296 (565)
Q Consensus 222 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~~~~-~~pesp~ 296 (565)
.+...+....++.|++|+++|+++.++...+..+|.++++.++..+ .+||+.|++.+++.++..+.++ +.+|+|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999999998887654 3899999998888776665544 4567765
Q ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHH-hhh
Q psy17080 297 WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYL-VYY 375 (565)
Q Consensus 297 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~ 375 (565)
.... .+.+|. +.. ++..+++..+.+.+..++++++++.++...+..+........ ..|
T Consensus 225 ~~~~-~~~~~~-~~i-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (465)
T TIGR00894 225 IHPC-ISKFEK-KYI-------------------NSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTY 283 (465)
T ss_pred cCCC-CCHHHH-HHH-------------------HhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111 011111 000 000001111112234578899999888777665554444332 333
Q ss_pred hhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHH--------HHHHHHHH--HHHHHHHhhcCCchHH
Q psy17080 376 GLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRP--------LCLTTLGA--GLACLMTLGFAPGSFI 442 (565)
Q Consensus 376 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~--------l~~~~~~~--~~~~~~~~~~~~~~~~ 442 (565)
...+..+..+.+. .....+..++.+++.+++|++.||+++|+. +..+.... ++..+.......+.+.
T Consensus 284 lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (465)
T TIGR00894 284 LPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYL 363 (465)
T ss_pred HHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHH
Confidence 3333333344433 334445567788899999999998754321 11111111 1111111111122233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH--HHH---hhhhhHHHHHHHHHHHH
Q psy17080 443 TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH--MQS---INIHFPMGLLGVVGVLG 517 (565)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~--~~~---~~~~~~~~~~~~~~~i~ 517 (565)
.++...+.+++.+...+.......|..|. .+|.+.|+.++.+.+|++++|.+.. .+. ..+...|.+.+++.+++
T Consensus 364 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~ 442 (465)
T TIGR00894 364 TIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILC 442 (465)
T ss_pred HHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHH
Confidence 33334444444444445555566677775 7899999999999999999998833 222 23666778888777777
Q ss_pred HHHHhhcccC
Q psy17080 518 GLSVLLLPDT 527 (565)
Q Consensus 518 ~~~~~~l~et 527 (565)
.++..+.++.
T Consensus 443 ~i~~~~~~~~ 452 (465)
T TIGR00894 443 VIFYLIFGSA 452 (465)
T ss_pred HHHeeeeecc
Confidence 7666555443
No 37
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=3e-26 Score=233.61 Aligned_cols=329 Identities=15% Similarity=0.143 Sum_probs=231.0
Q ss_pred eeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHH---Hh-----cchhHHHHHH
Q psy17080 143 IISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLV---AI-----SPWFELYLVV 214 (565)
Q Consensus 143 i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~---~~-----~~~~~~l~~~ 214 (565)
+.+|+|+ +..+.|++.+++.+++.+++++.|+++||+|||++++.+.++..++.+.. ++ .++++.+++.
T Consensus 42 l~~~lg~---s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 118 (392)
T PRK12382 42 VHHDLGF---GNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVG 118 (392)
T ss_pred HHHhcCC---cHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHH
Confidence 4678898 88999999999999999999999999999999999999988877665432 22 3578899999
Q ss_pred HHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhc
Q psy17080 215 RFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIM 291 (565)
Q Consensus 215 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~ 291 (565)
|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.++..+ .+||+.+.+..+..++.+......
T Consensus 119 r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 198 (392)
T PRK12382 119 RLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNGTV 198 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998898899999999999999999999999999999988887654 489887766544433333222223
Q ss_pred ccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccc---cHHHHHHHHHHHHHHH
Q psy17080 292 PESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWR---TPLIRLISFVQYIIWF 368 (565)
Q Consensus 292 pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~ 368 (565)
||.++. ++ ++.+.++.+| .+.+.... ..+...
T Consensus 199 ~~~~~~---~~----------------------------------------~~~~~~~~~~~~~~~~~~~~l--~~~~~~ 233 (392)
T PRK12382 199 RKVPAH---AG----------------------------------------ERPSLWSVVGLIWKPGLGLAL--QGVGFA 233 (392)
T ss_pred cCCCCC---cc----------------------------------------cCchHHHHHHHHHHhHHHHHH--HHHHHh
Confidence 332110 00 0000111111 11111111 001010
Q ss_pred HHHHhhhhhhhccCcCCC-cHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHH
Q psy17080 369 SVYLVYYGLVLNLSNIGG-DVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLA 447 (565)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (565)
....+. +.+..+.+. .........+++.+++.++.+++.||+|+|+.+..+..+.+++.+++. +.++.+...+..
T Consensus 234 --~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 309 (392)
T PRK12382 234 --VIGTFV-SLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLW-LAPTAWVALAGA 309 (392)
T ss_pred --HHHHHH-HHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH-HcccHHHHHHHH
Confidence 011111 111111221 223334455667788899999999999999998888887777776665 445555555556
Q ss_pred HHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhh
Q psy17080 448 MVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLL 523 (565)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 523 (565)
++.+++.+...+...+...|.+|++.|+++.|+.++...+|..++|.+ ...+..++...+.+.+++.+++.++.+.
T Consensus 310 ~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 310 ALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 666777777777777888899999999999999999999999999988 4456678888888888888777665543
No 38
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.95 E-value=4.6e-26 Score=238.62 Aligned_cols=350 Identities=11% Similarity=-0.052 Sum_probs=247.5
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|++.+|+|. +..+.+|+.+.|.+++.++.+++|+++||+|||++++.+.++++++++++++++|++.++++|+++|
T Consensus 29 ~p~i~~~l~~---s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G 105 (495)
T PRK14995 29 APTLSMTLGA---SGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLA 105 (495)
T ss_pred HHHHHHHhCC---CHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 6889999998 8888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhcccc-ccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHH-Hhhhcccc
Q psy17080 220 FFCVSIVFSGFVLCMELV-GGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLT-LWWIMPES 294 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~-~~~~~pes 294 (565)
++.+...+.....+.+++ |+++|+++.++......+|..++|.++..+ .+||+.|++.....++.++ ..+++||+
T Consensus 106 ~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 106 IGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999998888888887765 679999999999999999999999998776 4899999997766555443 45667876
Q ss_pred hhHHHhcCCHHHHHHHHH---------HHHHHcCCC-CchhHHH-------HHHHHhhhhccccCcccchhhccccHHHH
Q psy17080 295 PRWLVSMGRNKEAMKILG---------DAAKFNSRK-LPLNLEK-------LLKESVLSTNQDVGKKVQVMDLWRTPLIR 357 (565)
Q Consensus 295 p~~l~~~~~~~~a~~~l~---------~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 357 (565)
|+. .+++.+.....+. ......+.. ....... ........+. +.+.+.-..+++|++.++
T Consensus 186 ~~~--~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~-~~~~p~~~~~lf~~~~~~ 262 (495)
T PRK14995 186 AGR--RDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQL-AASRPMIDMRLFTHRIIL 262 (495)
T ss_pred CCC--CCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcCHHHhCCcccH
Confidence 531 1111111111100 000000000 0000000 0000001111 112222235688888877
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccC-cCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Q psy17080 358 LISFVQYIIWFSVYLVYYGLVLNLS-NIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMT 433 (565)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~ 433 (565)
...+..++.........+..+.+.+ ..+.+ ........++...++.++.|++.||+|+|+.+..+.++.+++.+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l 342 (495)
T PRK14995 263 SGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGL 342 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 6655555444433333333333332 23333 3344555667778889999999999999998888887777666555
Q ss_pred hhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 434 LGFA--PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 434 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.... .+.+......++.+++.+...+.....+.+..|++.++.+.++.++...+|+.+++.+
T Consensus 343 ~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai 406 (495)
T PRK14995 343 AMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAI 406 (495)
T ss_pred HHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 4222 2334445566777888888888888888899999999999999999999999999877
No 39
>PRK03699 putative transporter; Provisional
Probab=99.95 E-value=4.9e-26 Score=231.96 Aligned_cols=344 Identities=12% Similarity=0.022 Sum_probs=244.3
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++++ +..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus 30 ~~~i~~~~~~---s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G 106 (394)
T PRK03699 30 MGPIAEYFNL---PVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLG 106 (394)
T ss_pred hHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHH
Confidence 6788899999 8889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHHhhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLTLWWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~~~~~~pesp 295 (565)
++.+...+....++.|++|+++|++..+....+..+|..+++.+...+ .+||+.|++.+++.++..++.++ .+.|
T Consensus 107 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p 185 (394)
T PRK03699 107 VVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF-SEFP 185 (394)
T ss_pred HhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh-cCCc
Confidence 999988888999999999999999999888888888888877765432 38999999888776665544332 2222
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHH-Hhh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVY-LVY 374 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~ 374 (565)
+. .+.+ + ++. ++ ..++.+ ++.++...+..++...... ...
T Consensus 186 ~~--~~~~----------------~---------------~~~-~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 226 (394)
T PRK03699 186 AL--GKHA----------------P---------------KAD-KP----VAKEKW-GIGVLFLAIAALLYILAQLTFIS 226 (394)
T ss_pred cc--cccC----------------c---------------ccc-Cc----cccccC-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 10 0000 0 000 00 001111 2333333333322222222 222
Q ss_pred hhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 375 YGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 375 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
+...+..+..+.+. ........++.+++.++.+++.||++||+.+.....+.++.++++. ..++.+...+..++.+
T Consensus 227 ~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G 305 (394)
T PRK03699 227 WVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV-NTDDPSHLLYAILGLG 305 (394)
T ss_pred HHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH-HcCCchHHHHHHHHHH
Confidence 22223223344433 2333445567788999999999999999988877766666555554 4444444444556667
Q ss_pred HHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhcccCC
Q psy17080 452 FAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et~ 528 (565)
++.+..++...++..|..|.+ ++...|.......+|..++|.+ ...+..++...+++.+++.+++.++++.++++.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (394)
T PRK03699 306 FFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGFVS 383 (394)
T ss_pred HHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 777777777777777877644 5677888888889999999998 345667788888888888777777666666543
No 40
>PRK15075 citrate-proton symporter; Provisional
Probab=99.95 E-value=8.7e-26 Score=233.01 Aligned_cols=350 Identities=18% Similarity=0.167 Sum_probs=210.7
Q ss_pred ccceeeccccccCcchhh-HHHHHHH-----HHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhH----
Q psy17080 140 GHTIISEWDLVCSNSSLE-SLAEMVF-----LLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFE---- 209 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~-~l~~s~~-----~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~---- 209 (565)
.|.+.+|+++ ++.+. ++..+.. .++..+++++.|+++||+|||++++.+.+++++++++++++++++
T Consensus 38 ~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 114 (434)
T PRK15075 38 ATAIAKTFFP---AGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGL 114 (434)
T ss_pred HHHHHHHhCC---CCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 6788899988 44333 3333322 233357899999999999999999999999999999999999987
Q ss_pred ----HHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh-----------cchhHHH
Q psy17080 210 ----LYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS-----------HNWRLLQ 274 (565)
Q Consensus 210 ----~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~-----------~~Wr~~~ 274 (565)
.+++.|+++|++.+...+....++.|++|+++|+++.++...+..+|..+++.++..+ .+||+.|
T Consensus 115 ~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f 194 (434)
T PRK15075 115 AAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPF 194 (434)
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHH
Confidence 4689999999999999999999999999999999999998887777776665554432 4899999
Q ss_pred HHHHHHHHHHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccH
Q psy17080 275 WVITIPTIFFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTP 354 (565)
Q Consensus 275 ~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 354 (565)
++..+...+........||++++...++ + .+.+..+++..+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~-----------------------------------~--~~~~~~~~~~~~~~ 237 (434)
T PRK15075 195 LIGCLIVPFIFLIRRSLEETEEFLARKH-----------------------------------R--PSMREIFRSLAANW 237 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHhhh-----------------------------------c--cccccHHHHHHHhH
Confidence 8755443322222233444432110000 0 00001112222333
Q ss_pred HHHHHHHHH-HHHHHHH-HHhhhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHH
Q psy17080 355 LIRLISFVQ-YIIWFSV-YLVYYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLA 429 (565)
Q Consensus 355 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~ 429 (565)
..+...... ++..... ...++...+..+..+.+ ......+.+++.+++.++.|++.||+|||+.+..+.++..+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~ 317 (434)
T PRK15075 238 RIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILT 317 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 222221111 1111111 22223333222223433 233444566778889999999999999999887765544332
Q ss_pred HH-HHhhc-C-CchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHH-HHHHHHHHH--HHHHHhhh
Q psy17080 430 CL-MTLGF-A-PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAG-VALILIPYL--WHMQSINI 503 (565)
Q Consensus 430 ~~-~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~-lg~~i~p~i--~~~~~~~~ 503 (565)
.+ .+... . +.........++.+++.+...+....+..|.+|++.|+++.|+.+..+. +++.++|.+ ...+..++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 318 AYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 21 11111 1 1112222223344555566566667888999999999999998755444 457778887 33344453
Q ss_pred hhH-HHHHHHHHHHHHHHHhhcccCCC
Q psy17080 504 HFP-MGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 504 ~~~-~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
... ........+++.+..+.+++.++
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK15075 398 KAAPGYWLSFAAVCGLIATLVLYRRRG 424 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccccc
Confidence 211 11111122333334455666555
No 41
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.95 E-value=6e-26 Score=230.32 Aligned_cols=338 Identities=13% Similarity=0.110 Sum_probs=233.8
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+|+|+ +..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus 26 l~~~~~~~g~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G 102 (382)
T PRK10091 26 LTELAHDVGI---SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG 102 (382)
T ss_pred hHHHHHHcCC---CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 6778899999 8888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
++.+...+....++.|+.++++|+++.++...+..+|..+++.++..+ .+||+.|++.++..++..+. ++++||.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 103 FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred hhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999998888889999999999999999999999999999988876654 48999999988776555443 45577753
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHH-HHhh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSV-YLVY 374 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~ 374 (565)
+ +.+. +. + ...+.+|++..+.......+..... ....
T Consensus 183 ~----~~~~--------------------~~----~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (382)
T PRK10091 183 D----EAKG--------------------GL----R--------------EQFHFLRSPAPWLIFAATMFGNAGVFAWFS 220 (382)
T ss_pred c----cccc--------------------CH----H--------------HHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 2 0000 00 0 0012345555444333332222111 1112
Q ss_pred hhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 375 YGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 375 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
|..++..+..+.+ ........+++.+++.++.+++.||+++|+.+..+..+.+++.+++....+..+...+..++.+
T Consensus 221 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 300 (382)
T PRK10091 221 YIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICC 300 (382)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 2222332233333 2344556677888999999999999999999888887777766555423333333333344444
Q ss_pred HHHHHHHHH-HHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHH-hhhhhHHHHHHHHHHHHHHHHhhc
Q psy17080 452 FAISSSNVI-IPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQS-INIHFPMGLLGVVGVLGGLSVLLL 524 (565)
Q Consensus 452 ~~~~~~~~~-~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~-~~~~~~~~~~~~~~~i~~~~~~~l 524 (565)
++.....+. ......+..|.+.++.+ ..+....+|..++|.+ ...+. .++...+.+.+++.++........
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 301 AGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 443333332 22344455555555544 3466778999999988 33443 467777777776666655544333
No 42
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=2.1e-25 Score=233.12 Aligned_cols=349 Identities=16% Similarity=0.120 Sum_probs=244.0
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++++ +..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++++++++++.+++.|+++|
T Consensus 33 ~p~~~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 109 (471)
T PRK10504 33 LPSMAQSLGE---SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQG 109 (471)
T ss_pred HHHHHHHhCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 6778888998 8888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
++.+...+...+++.|++|+++|+++.++......+|..+++.++..+ .+||+.|++.....++..+. ....|+.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 110 VGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred hhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999999999999999999999999999999999999999988887654 48999999877665554444 34445443
Q ss_pred hHHHhcCCHHHHHHHHHHH------HHHcCCCC---ch-hHHHH-------HHHHhhhhccccCcccchhhccccHHHHH
Q psy17080 296 RWLVSMGRNKEAMKILGDA------AKFNSRKL---PL-NLEKL-------LKESVLSTNQDVGKKVQVMDLWRTPLIRL 358 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~------~~~~~~~~---~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (565)
. .+.|.+.+.....-. ...++.+. .. ..... ......++....++..+ .+++|+|.++.
T Consensus 190 ~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~ 265 (471)
T PRK10504 190 M---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFS-LKLFRTRTFSL 265 (471)
T ss_pred c---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccC-HHHhcccchHH
Confidence 1 122222221111000 00011110 00 00000 00000111111112222 35789998887
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccC-cCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHh
Q psy17080 359 ISFVQYIIWFSVYLVYYGLVLNLS-NIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTL 434 (565)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~ 434 (565)
.....++.+......++..+++.+ ..+.+. ........+..+++.++.+++.||+|||+.+..+..+.++..+++.
T Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~ 345 (471)
T PRK10504 266 GLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFM 345 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 776666665554444444444433 234433 2333444556667778899999999999999888887777766655
Q ss_pred hcCCch--HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 435 GFAPGS--FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 435 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
...... +......++.+++.+..++.......+..|++.++.+.|+.++...+|..++|.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i 408 (471)
T PRK10504 346 LVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTI 408 (471)
T ss_pred hccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHH
Confidence 232222 2223334455677777778888888899999999999999999999999998887
No 43
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.95 E-value=4.9e-26 Score=229.72 Aligned_cols=318 Identities=16% Similarity=0.086 Sum_probs=238.6
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc-----hhHHHHHHH
Q psy17080 141 HTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP-----WFELYLVVR 215 (565)
Q Consensus 141 ~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~-----~~~~l~~~r 215 (565)
|....+++. +..+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.++.+ +++.+++.|
T Consensus 23 ~~~~~~~~~---s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (365)
T TIGR00900 23 PLYVLAGTG---SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLA 99 (365)
T ss_pred HHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 445566676 788899999999999999999999999999999999999999999888888877 999999999
Q ss_pred HHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhc-
Q psy17080 216 FFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIM- 291 (565)
Q Consensus 216 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~- 291 (565)
++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.++..+ .+||+.|++.++..++..+..+.+
T Consensus 100 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 179 (365)
T TIGR00900 100 GILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVR 179 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999887664 489999988777666555444333
Q ss_pred -ccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHH
Q psy17080 292 -PESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSV 370 (565)
Q Consensus 292 -pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 370 (565)
||.++. .+. + .+.+. .+ +....++.++|+|.++...+...+.....
T Consensus 180 ~~~~~~~----~~~-~---------------~~~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (365)
T TIGR00900 180 IPELAAS----EIQ-A---------------LSNAV---LR----------DTREGIKFVLKNPLLRTLLLLALLFNLVF 226 (365)
T ss_pred cccCCCc----ccc-c---------------cchhH---HH----------HHHhHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 332210 000 0 00000 00 00113455677888776666555444433
Q ss_pred HHhh-hhhhhccCc-CCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCc-hHHHH
Q psy17080 371 YLVY-YGLVLNLSN-IGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPG-SFITI 444 (565)
Q Consensus 371 ~~~~-~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 444 (565)
.... ...+.+.++ .+.+ ........+++.+++.++.+++.||.+||+.+..+..+.+++++.+. +.++ .+...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 305 (365)
T TIGR00900 227 APAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVG-LTPPNFPLFL 305 (365)
T ss_pred HHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHH-hhchhHHHHH
Confidence 2222 222332222 3322 23444556677888899999999999999988887777777666665 4443 45555
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 445 SLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
+..++.+++.+...+...++..|..|++.|+++.|+.++...++..++|.+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 356 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLIL 356 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666777888888888889999999999999999999999999999999988
No 44
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=1e-26 Score=233.52 Aligned_cols=319 Identities=21% Similarity=0.211 Sum_probs=233.0
Q ss_pred ceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhh
Q psy17080 142 TIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFF 221 (565)
Q Consensus 142 ~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~ 221 (565)
.+.+++++ +..+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++.++..++++++.+++.|++.|++
T Consensus 22 ~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 98 (352)
T PF07690_consen 22 YLAEELGL---SPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIG 98 (352)
T ss_dssp HHHCCSTT---TSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccc
Confidence 56788888 888899999999999999999999999999999999999999999977777778888999999999999
Q ss_pred hhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHH-hhhcccchhH
Q psy17080 222 CVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH---NWRLLQWVITIPTIFFLTL-WWIMPESPRW 297 (565)
Q Consensus 222 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~---~Wr~~~~~~~~~~~~~~~~-~~~~pesp~~ 297 (565)
.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+. +||+.|++.++..++..++ .++++++|+.
T Consensus 99 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~ 178 (352)
T PF07690_consen 99 SGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPP 178 (352)
T ss_dssp HHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STT
T ss_pred cccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccc
Confidence 99999999999999999999999999999999999999999988764 7999999988887777654 3445544321
Q ss_pred HHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCccc-chhhccccHHHHHHHHHHHHHHHHHHHhhhh
Q psy17080 298 LVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKV-QVMDLWRTPLIRLISFVQYIIWFSVYLVYYG 376 (565)
Q Consensus 298 l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (565)
...+.+.+ ++.+.+++.. .++.+++++.++...+..+...+........
T Consensus 179 ~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (352)
T PF07690_consen 179 RERESPKE------------------------------SESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFF 228 (352)
T ss_dssp TT--SSTT------------------------------TT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccc------------------------------cccccccccccccccccccchhhhhhhhhhHHHHHHHHhhcc
Confidence 00000000 0000001111 2556666665552333333332233222222
Q ss_pred hhhc-cCcCCCc-HHH---HHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC--chHHHHHHHHH
Q psy17080 377 LVLN-LSNIGGD-VYL---NTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP--GSFITISLAMV 449 (565)
Q Consensus 377 ~~~~-~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 449 (565)
.+.+ .+..+.+ ... ...+.++..+++.++.+++.||+++|+..........+..+.+..... +........++
T Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (352)
T PF07690_consen 229 LPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFL 308 (352)
T ss_dssp HHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHH
T ss_pred cchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3332 3444444 222 345566677777999999999999988777777666666655552221 22444555666
Q ss_pred HHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHH
Q psy17080 450 GKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIP 493 (565)
Q Consensus 450 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p 493 (565)
.+++.+...+....+..|..|++.|+++.|+.++...+|+.++|
T Consensus 309 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 309 IGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 77888888899999999999999999999999999999999998
No 45
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.95 E-value=2e-25 Score=226.52 Aligned_cols=335 Identities=13% Similarity=0.028 Sum_probs=234.8
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+|+++ +..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|+++|
T Consensus 29 lp~~~~~~~~---s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 105 (381)
T PRK03633 29 VPLWLAQEHL---PTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAG 105 (381)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 6778888998 8889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHhh-hcccchh
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSHN--WRLLQWVITIPTIFFLTLWW-IMPESPR 296 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~~--Wr~~~~~~~~~~~~~~~~~~-~~pesp~ 296 (565)
++.+...+.....+.+..++++|+++.+....+..+|..+++.++..+.. ++...+..++.....+...+ ..+|++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (381)
T PRK03633 106 IGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLAAILPLLFTRILNQQA 185 (381)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhcccCCCC
Confidence 99999888888888899999999999999999999999999988876532 22223332222221111111 1111100
Q ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhh
Q psy17080 297 WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYG 376 (565)
Q Consensus 297 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (565)
++ ++..+.++.+|+|.++................+..
T Consensus 186 ----------------------------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (381)
T PRK03633 186 ----------------------------------------EN---HDSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGL 222 (381)
T ss_pred ----------------------------------------CC---CCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 00 01123445666766554433222222222222222
Q ss_pred hhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHH
Q psy17080 377 LVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFA 453 (565)
Q Consensus 377 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (565)
.+.+.++.+.+. .....+..+..+++.+..+++.||+++|+.+..+..+.+++++.+. .. ........+.+++
T Consensus 223 lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~~-~~~~~~~~l~g~~ 298 (381)
T PRK03633 223 MPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML---SQ-AAMAPALFILGAA 298 (381)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---hh-HHHHHHHHHHHHH
Confidence 343444444332 3334455677788999999999999999988887777766655433 11 1222233344444
Q ss_pred HHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhc
Q psy17080 454 ISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLL 524 (565)
Q Consensus 454 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l 524 (565)
....+|.....+.|..|++.++...+..++...+|++++|.+ ...+..++...|.+.+.+.++..+..+..
T Consensus 299 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 299 GFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 455678888888899998887888888888889999999988 44566777777888777776655444433
No 46
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.95 E-value=9.1e-26 Score=229.66 Aligned_cols=336 Identities=17% Similarity=0.182 Sum_probs=237.5
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++++ +..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus 28 ~p~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 104 (385)
T TIGR00710 28 FPEIAADLST---PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQA 104 (385)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 5778889998 8888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
++.+...+...+++.|++|+++|+++.++.+....+|..+++.++..+ .+||+.+++.++..++..+. +++.||++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 105 FGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred cchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999988887654 48999999877766555444 45567754
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYY 375 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (565)
+.. .+ ++ . ++....+++++|+|.++...+...+.+........
T Consensus 185 ~~~---~~-~~-------------------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (385)
T TIGR00710 185 PYE---AR-IQ-------------------I--------------STYFETFLLLLKSKMFWGYALIYGASFGGFFAFFS 227 (385)
T ss_pred CCc---cc-CC-------------------H--------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence 310 00 00 0 00011244567777777665554443333222221
Q ss_pred hhh-hccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc--CC-ch-HHHHHHH
Q psy17080 376 GLV-LNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF--AP-GS-FITISLA 447 (565)
Q Consensus 376 ~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~--~~-~~-~~~~~~~ 447 (565)
..+ +..+..+.+. .......++..+++.++.+++.||+++|+.+..+..+..++.+++... .. .. .......
T Consensus 228 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (385)
T TIGR00710 228 GAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPM 307 (385)
T ss_pred cChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 122 2222333332 334445667788899999999999999998887776666555444311 11 12 2333344
Q ss_pred HHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q psy17080 448 MVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV-ALILIPYLWHMQSINIHFPMGLLGVVGVLG 517 (565)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~l-g~~i~p~i~~~~~~~~~~~~~~~~~~~~i~ 517 (565)
++.+++.+...+....+..|..| +.|+++.++.+..... |.+.+|.+... .......+.+.+....+.
T Consensus 308 ~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 376 (385)
T TIGR00710 308 MFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI-HGNTAWPMSLSCLVLAVV 376 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc-cccChHHHHHHHHHHHHH
Confidence 55667777778888888888887 5689999998887765 55555555422 223334444444443333
No 47
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.95 E-value=1e-25 Score=227.04 Aligned_cols=339 Identities=11% Similarity=0.028 Sum_probs=236.1
Q ss_pred ccceee-ccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc-----chhHHHHH
Q psy17080 140 GHTIIS-EWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS-----PWFELYLV 213 (565)
Q Consensus 140 ~~~i~~-~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~-----~~~~~l~~ 213 (565)
.+.+.+ |+++ +..+.+++.+++.+++.++.++.|++.||+|.|+++.++.++.++.+++.+++ ++++.+++
T Consensus 57 ~~~~~~~~~~l---s~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli 133 (462)
T PRK15034 57 TVNLNKIGFNF---TTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIV 133 (462)
T ss_pred HHHhhhhhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHH
Confidence 344444 7999 88899999999999999999999999999999999999999999999999987 89999999
Q ss_pred HHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHH----HHHHHHHH-----------------hcchhH
Q psy17080 214 VRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYI----AISGIAYY-----------------SHNWRL 272 (565)
Q Consensus 214 ~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~----~~~~l~~~-----------------~~~Wr~ 272 (565)
.|++.|++ +..++.....+++|+|+++||++.++.....++|.. +.|.+... ..+||.
T Consensus 134 ~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~ 212 (462)
T PRK15034 134 IALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLAN 212 (462)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHH
Confidence 99999998 778999999999999999999999999655555554 44433211 113777
Q ss_pred HHHHHHHHHHHHHHHhhh-cccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhcc
Q psy17080 273 LQWVITIPTIFFLTLWWI-MPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLW 351 (565)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~-~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 351 (565)
..++..++.++..++.++ .++.|. .+....+.++.+
T Consensus 213 ~~~~~~~~~iv~~i~~~~~~~~~~~-------------------------------------------~~~~~~~~~~vl 249 (462)
T PRK15034 213 AAWIWVPLLAIATIAAWSGMNDIAS-------------------------------------------SRASIADQLPVL 249 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc-------------------------------------------cccCHHHHHHHh
Confidence 777777766665555444 333221 000112345678
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhhhhc-cCcCCC-cHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHH
Q psy17080 352 RTPLIRLISFVQYIIWFSVYLVYYGLVLN-LSNIGG-DVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLA 429 (565)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~ 429 (565)
|+|..|...+..++.+.......+.++++ ...++. +......+..+...++.+++|+++||+|+|+++.++.+++.++
T Consensus 250 k~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 250 QRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIF 329 (462)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHH
Confidence 89988888777766655444333223222 222221 1222233445667788899999999999999999888777666
Q ss_pred HHHHhhcCCc-----hHHHHHHHHHHHHHHHHHHHHHHHhcccccch---------------------hhhhhHHHHHHH
Q psy17080 430 CLMTLGFAPG-----SFITISLAMVGKFAISSSNVIIPIYTAELFPT---------------------KMRNLGVGASSV 483 (565)
Q Consensus 430 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---------------------~~r~~~~g~~~~ 483 (565)
........+. .+...+..+...+..+......+-++...+|+ +.-|.+.|+...
T Consensus 330 ~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a 409 (462)
T PRK15034 330 SALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISA 409 (462)
T ss_pred HHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHH
Confidence 5443323332 13333333344455555666667677777764 145788899999
Q ss_pred HHHHHHHHHHHHHH--HHH-hhhhhHHHHHHHHHHHHHHHHhhcc
Q psy17080 484 PAGVALILIPYLWH--MQS-INIHFPMGLLGVVGVLGGLSVLLLP 525 (565)
Q Consensus 484 ~~~lg~~i~p~i~~--~~~-~~~~~~~~~~~~~~~i~~~~~~~l~ 525 (565)
.+.+|+++.|.+.. .+. .++...++.+.+..+++.++.++.-
T Consensus 410 ~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 410 IGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999997722 222 3466678888888877777665443
No 48
>KOG2532|consensus
Probab=99.95 E-value=1.2e-25 Score=228.09 Aligned_cols=355 Identities=14% Similarity=0.142 Sum_probs=256.4
Q ss_pred eeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHhhh
Q psy17080 144 ISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP--WFELYLVVRFFLGFF 221 (565)
Q Consensus 144 ~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~ 221 (565)
..+|++ ++.+.+++.+.+++|+++++++.|+++||+|-|+++..+.++.+++++++.++. +++.+++.|+++|++
T Consensus 65 ~~~~~w---s~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 65 AGEYDW---SSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG 141 (466)
T ss_pred CceecC---CHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence 567888 888889999999999999999999999999999999999999999999998874 556789999999999
Q ss_pred hhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHHhh-hcccchh
Q psy17080 222 CVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLTLWW-IMPESPR 296 (565)
Q Consensus 222 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~~~~-~~pesp~ 296 (565)
.|..+|+...+...|.|++||++..++...+..+|.++.-++++.+ .||++.|++.++.+++..++++ +..|+|.
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~ 221 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPS 221 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999999877666553 4899999999999888777754 4566665
Q ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHH-HHHHHhhh
Q psy17080 297 WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIW-FSVYLVYY 375 (565)
Q Consensus 297 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~ 375 (565)
- + +...+++.+.++....++..+++.+.+++++++++.+|...+..+.-. ....+..|
T Consensus 222 ~---h------------------~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y 280 (466)
T KOG2532|consen 222 K---H------------------PNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTY 280 (466)
T ss_pred c---C------------------CCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 111111111122222222222225778999999999988777665543 34445555
Q ss_pred hhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCC---------hHHHHHHHHHHHHHHHHHhhcCCch-H-
Q psy17080 376 GLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGR---------RRPLCLTTLGAGLACLMTLGFAPGS-F- 441 (565)
Q Consensus 376 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~gr---------r~~l~~~~~~~~~~~~~~~~~~~~~-~- 441 (565)
...+.-+-++.+. +....+.-+...+..+++|.++||+.+ |..-.++....+++++.+. +.+.. .
T Consensus 281 ~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~-~~~~~~~~ 359 (466)
T KOG2532|consen 281 LPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLA-FTSDEHRL 359 (466)
T ss_pred hhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeee-ecCCCcch
Confidence 5555555555553 344556667788889999999998755 3333455566666666666 44432 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HH---HHhhhhhHHHHHHHHHHH
Q psy17080 442 ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HM---QSINIHFPMGLLGVVGVL 516 (565)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~---~~~~~~~~~~~~~~~~~i 516 (565)
..++++.+.....+...+..+.-..+..| +..+..+|+.+....+.++++|.+. .. ....|...|++.+++.++
T Consensus 360 ~a~~~l~~~~~~~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~ 438 (466)
T KOG2532|consen 360 LAVILLTIAIGLSGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIV 438 (466)
T ss_pred HHHHHHHHHHHHcccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHH
Confidence 33333333323333333333444444444 5679999999999999999999992 22 234677888888888888
Q ss_pred HHHHHhhc
Q psy17080 517 GGLSVLLL 524 (565)
Q Consensus 517 ~~~~~~~l 524 (565)
+.+.+.+.
T Consensus 439 ~~i~f~~f 446 (466)
T KOG2532|consen 439 GNIIFLFF 446 (466)
T ss_pred hchheeEe
Confidence 87666554
No 49
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=1.9e-26 Score=238.64 Aligned_cols=362 Identities=14% Similarity=0.109 Sum_probs=241.1
Q ss_pred CCcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHH-HH
Q psy17080 137 SSFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLV-VR 215 (565)
Q Consensus 137 ~~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~-~r 215 (565)
+.+.+.+.+++++ +..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++++.+++ .|
T Consensus 39 ~~~~~~i~~~~g~---s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 115 (455)
T TIGR00892 39 TVFFKELQQIFQA---TYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAG 115 (455)
T ss_pred hhhHHHHHHHhCc---chhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 4457889999999 8888999999999999999999999999999999999999999999999999999998865 57
Q ss_pred HHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhc-
Q psy17080 216 FFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIM- 291 (565)
Q Consensus 216 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~- 291 (565)
++.|++.+...+....++.++++ ++|+++.++...+..+|..+++.++..+ .+||+.|++.++..++..+..+++
T Consensus 116 ~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 116 FITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMR 194 (455)
T ss_pred HHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999998877777888899995 7899999999999999998888776543 489999999888766555444333
Q ss_pred ccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHH
Q psy17080 292 PESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVY 371 (565)
Q Consensus 292 pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 371 (565)
++.+.. .+.+. +.++ +.. .+...+ + . ..+...++..+....+++++|.++...+..++..+...
T Consensus 195 ~~~~~~--~~~~~-~~~~------~~~-~~~~~~--~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 258 (455)
T TIGR00892 195 PVGPSQ--RVSKS-KSKE------GLP-PDGSTK--K-L---SKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFF 258 (455)
T ss_pred CCCccc--ccccc-cccc------cCC-CCCccc--c-c---cccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHcc
Confidence 322210 00000 0000 000 000000 0 0 00000000011111246788887766655444444333
Q ss_pred HhhhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhc--CChHHHHH--HHHHHHHHHHHHhhcCCchHHHH
Q psy17080 372 LVYYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKM--GRRRPLCL--TTLGAGLACLMTLGFAPGSFITI 444 (565)
Q Consensus 372 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~--grr~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 444 (565)
..+..++.+..+.+.+. .....+.+++.+++.++.+++.||. ++|+...+ +.++.+++.++.. ...+.+...
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~-~~~~~~~~~ 337 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA-LAGDYTGLV 337 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH-HhchHHHHH
Confidence 22222222223334332 3444556677788888899999973 33333332 2233333333333 344445555
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHh-hhhhHHHHHHHHHHHHHH
Q psy17080 445 SLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQSI-NIHFPMGLLGVVGVLGGL 519 (565)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~-~~~~~~~~~~~~~~i~~~ 519 (565)
+..++.+++.+...+...+...|.+|++.++++.|+.++...+|++++|.+. ..+.. ++...|.+.+++.+++++
T Consensus 338 i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 338 IYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 5666777777777788889999999999999999999999999999999882 33444 466777777776665544
No 50
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.95 E-value=2.6e-25 Score=233.60 Aligned_cols=350 Identities=13% Similarity=0.106 Sum_probs=248.9
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++++.+++.|+++|
T Consensus 25 ~p~~~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G 101 (485)
T TIGR00711 25 IPTIAGDLGS---SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQG 101 (485)
T ss_pred HHHHHHhcCC---ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 6788889998 7788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
++.+...+...+++.|++|+++|+++.++...+..+|..+++.++..+ .+||+.|++.+.+.++..+. .+++||++
T Consensus 102 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 102 FGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcc
Confidence 999999999999999999999999999999999999999999887765 48999999987776555444 45567654
Q ss_pred hHHHhcCCHHHHHHHH--------HHHHHHcCCCC---chhHHHHHH-------HHhhhhccccCcccchhhccccHHHH
Q psy17080 296 RWLVSMGRNKEAMKIL--------GDAAKFNSRKL---PLNLEKLLK-------ESVLSTNQDVGKKVQVMDLWRTPLIR 357 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l--------~~~~~~~~~~~---~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~ 357 (565)
+. .+++.+.....+ .......+... +........ .....+.. ++++....++++++.++
T Consensus 182 ~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 258 (485)
T TIGR00711 182 PA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELT-DDNPLVDLRLFKYRNFT 258 (485)
T ss_pred cc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHc-CCCCccCHHHHcCCChH
Confidence 31 112222111110 00001111111 101000000 00001111 11122234678888877
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccC-cCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Q psy17080 358 LISFVQYIIWFSVYLVYYGLVLNLS-NIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMT 433 (565)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~ 433 (565)
...+..++..+......+..+.+.+ ..+.+ ........+++.+++.++.+++.||+|||+.+.++..+.+++..++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~ 338 (485)
T TIGR00711 259 IGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWR 338 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHH
Confidence 7666555554443333333333332 23333 2344555667888899999999999999999988888877777665
Q ss_pred hh-cCCc--hHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 434 LG-FAPG--SFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 434 ~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.. ..++ .+......++.+++.+..++.......+..|++.|+++.|+.++...+|+.+++.+
T Consensus 339 ~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i 403 (485)
T TIGR00711 339 AFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTAL 403 (485)
T ss_pred hccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 51 2222 23444456667788877777777777788999999999999999999999999887
No 51
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.95 E-value=1.5e-25 Score=227.70 Aligned_cols=343 Identities=12% Similarity=0.040 Sum_probs=234.7
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhh
Q psy17080 141 HTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGF 220 (565)
Q Consensus 141 ~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~ 220 (565)
+.+.+|++. +....+++.+.+.+++.+++++.|+++||+|||++++.+.++.++++++++++.+. ++.|+++|+
T Consensus 27 ~~~~~~~~~---s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~ 100 (393)
T PRK11195 27 IALLKELHY---PDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGI 100 (393)
T ss_pred HHHHHHcCC---cHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 344567776 77788999999999999999999999999999999999999999998888777664 788999999
Q ss_pred hhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhcch--hHHHHHHHHHHHHHHHHhhhcccchhHH
Q psy17080 221 FCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSHNW--RLLQWVITIPTIFFLTLWWIMPESPRWL 298 (565)
Q Consensus 221 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~~W--r~~~~~~~~~~~~~~~~~~~~pesp~~l 298 (565)
+.+...|...+++.|++|+++|+++.++.+....+|.+++|.++..+.+| +..+.+.+...++..+..+.+||+|+..
T Consensus 101 ~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~ 180 (393)
T PRK11195 101 GAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFIPRLGARR 180 (393)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 99999999999999999999999999999999999999999988876544 4444444444344444556788875421
Q ss_pred HhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy17080 299 VSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLV 378 (565)
Q Consensus 299 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (565)
. ++.++..+.+ ++. ....+.++++|.++...+...+.+.......+..+
T Consensus 181 ~--~~~~~~~~~~-------------------~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (393)
T PRK11195 181 P--GQSWNPIALL-------------------RDF----------FHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVL 229 (393)
T ss_pred c--ccCCCHHHHH-------------------HHH----------HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000000000 000 00124567777766655554444444433333333
Q ss_pred hccC-cCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHH
Q psy17080 379 LNLS-NIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAI 454 (565)
Q Consensus 379 ~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (565)
.+.+ .++.+ ........+++.+++.++.+++.||.++|+.+..+. +.++..+.+. +.++.+......++.+++.
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMA-LQHSLLPAYPLLILIGALG 307 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHH-HHhHHHHHHHHHHHHHHhh
Confidence 3222 22322 334455666778888999999999988887776664 3333333333 3333344444555667777
Q ss_pred HHHHHHHHHhcccccchhh-hhhHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhHHHHHHHHHHHHHHHHh
Q psy17080 455 SSSNVIIPIYTAELFPTKM-RNLGVGASSVPAGVALILIPYL-WHMQSINIHFPMGLLGVVGVLGGLSVL 522 (565)
Q Consensus 455 ~~~~~~~~~~~~e~~p~~~-r~~~~g~~~~~~~lg~~i~p~i-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 522 (565)
+...+...+...+..|++. +|++.++.++...++..++..+ ......+....+.+.+...+++..+.+
T Consensus 308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 7766667777788766655 7999999999999999888877 334556666666666555555555443
No 52
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.95 E-value=1.4e-26 Score=234.89 Aligned_cols=343 Identities=13% Similarity=0.093 Sum_probs=230.8
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++++ +..+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.+++++++.+++.|++.|
T Consensus 18 ~~~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 94 (379)
T TIGR00881 18 MPYLVEEIGL---SKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNG 94 (379)
T ss_pred hHHHHHHhCC---CHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 5778889999 8889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHH-HHHHh---cchhHHHHHHHHHHHHHH-HHhhhcccc
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISG-IAYYS---HNWRLLQWVITIPTIFFL-TLWWIMPES 294 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~-l~~~~---~~Wr~~~~~~~~~~~~~~-~~~~~~pes 294 (565)
++.+...+...+++.|++|+++|+++.++...+..+|.++++. ++..+ .+||+.|++.++..++.. +.+++.||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 95 IFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred hhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCC
Confidence 9999999999999999999999999999999999999999883 44332 489999998877665543 445567776
Q ss_pred hhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhh
Q psy17080 295 PRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVY 374 (565)
Q Consensus 295 p~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 374 (565)
|+....+.+ ++. ..+..++ ...+++++.+..+...++++++|.++...+...+.+.......
T Consensus 175 ~~~~~~~~~-~~~-----------~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (379)
T TIGR00881 175 PQSCGLPPA-EEM-----------PNEEPDG------DAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGIL 236 (379)
T ss_pred ccccccCcc-ccC-----------ccccccc------ccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 542110000 000 0000000 0000001111122335667788887776666555544433222
Q ss_pred -hhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcC-ChHH-HHHHHHHH-HHHHHHHhhcCC--chHHHHH
Q psy17080 375 -YGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMG-RRRP-LCLTTLGA-GLACLMTLGFAP--GSFITIS 445 (565)
Q Consensus 375 -~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~g-rr~~-l~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 445 (565)
+...+..+..+.+ .........+..+++.++.+++.||.. ||+. +....... .++..... ..+ +.+....
T Consensus 237 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 315 (379)
T TIGR00881 237 DWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYW-LNPAANPLMDLI 315 (379)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh-cCcchhHHHHHH
Confidence 2222222333333 234455566778889999999999863 3332 22222121 22222222 211 2223333
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhh
Q psy17080 446 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIH 504 (565)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~ 504 (565)
..++.++......+....+..|.+|++.|+++.|+.+....+|+.++|.+ ...+..++.
T Consensus 316 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 376 (379)
T TIGR00881 316 CLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWA 376 (379)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccc
Confidence 33444444444445566788999999999999999999999999999988 334444443
No 53
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=3.5e-25 Score=222.05 Aligned_cols=320 Identities=22% Similarity=0.271 Sum_probs=256.7
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.+.+.++++. +..+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.++..+.++++.+++.|++.|
T Consensus 22 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 98 (352)
T cd06174 22 LPLLAEDLGL---SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLG 98 (352)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 5666777777 7888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccchh
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPESPR 296 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pesp~ 296 (565)
++.+...+...+++.|++|+++|++..++...+..+|..+++.++..+ .+||+.+++.++..++..+..++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 174 (352)
T cd06174 99 LGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL---- 174 (352)
T ss_pred cccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 999999999999999999999999999999999999999999888765 3699999988877666655544322
Q ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhh
Q psy17080 297 WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYG 376 (565)
Q Consensus 297 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (565)
|.++...+...+...........
T Consensus 175 ---------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 197 (352)
T cd06174 175 ---------------------------------------------------------RLLLLLALAFFLLSFGYYGLLTY 197 (352)
T ss_pred ---------------------------------------------------------HHHHHHHHHHHHHHhHHHHHHHH
Confidence 22333333333333333222222
Q ss_pred hhhccCcC-CCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChH-HHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 377 LVLNLSNI-GGD---VYLNTIISGIVEFPAIVISIFILLKMGRRR-PLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 377 ~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
.+....+. +.+ ........+++.+++.++.+++.||++||+ .+..+..+..++.+... ..++.+...+..++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~g 276 (352)
T cd06174 198 LPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA-LAPSLALLLVALLLLG 276 (352)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 22222221 222 344556677888899999999999999999 88888888888887776 5555566666777788
Q ss_pred HHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhc
Q psy17080 452 FAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLL 524 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l 524 (565)
++.+...+....+..|..|++.|++..|+.+....+|..++|.+ ...+..++...+.+.+++.+++.+..+++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 277 FGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred HHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHheec
Confidence 88888889999999999999999999999999999999999998 33446678888888888888877765543
No 54
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.95 E-value=2.3e-25 Score=228.53 Aligned_cols=344 Identities=13% Similarity=0.041 Sum_probs=241.0
Q ss_pred ccceeeccccccCcc--hhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNS--SLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFF 217 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~--~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l 217 (565)
.|.+.+++++.-.+. ...|++.+++.++..+++++.|+++||+|||++++.+.++.+++.+++.++++++.+++.|++
T Consensus 37 l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (408)
T PRK09874 37 LPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRAL 116 (408)
T ss_pred HHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 667777888732111 235899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhccc
Q psy17080 218 LGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPE 293 (565)
Q Consensus 218 ~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pe 293 (565)
.|++.+ ..+....++.|++++++|+++.++...+..+|.++++.++..+ .+||+.+++.++..++..+. .+++||
T Consensus 117 ~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (408)
T PRK09874 117 LGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRE 195 (408)
T ss_pred HHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999854 5677778889999999999999999999999999988887654 48999999887776555444 455666
Q ss_pred chhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHH-HHHHHHHHHH
Q psy17080 294 SPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFV-QYIIWFSVYL 372 (565)
Q Consensus 294 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~ 372 (565)
+++.. .+ ++ + .+. .+..+.++++..+...+. ..........
T Consensus 196 ~~~~~---~~-~~-~---------------~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T PRK09874 196 NFQPV---SK-KE-M---------------LHM------------------REVVTSLKNPKLVLSLFVTTLIIQVATGS 237 (408)
T ss_pred Ccccc---cc-hh-h---------------hHH------------------HHHHHhCcCCchHHHHHHHHHHHHHHHHH
Confidence 53210 00 00 0 000 001223444444332222 1111111111
Q ss_pred hhhhhhhccCcCC---Cc----HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHH
Q psy17080 373 VYYGLVLNLSNIG---GD----VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITIS 445 (565)
Q Consensus 373 ~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (565)
.......+..+.. .+ ......+.++..+++.+..+++.||++||+.+..+..+.+++.+... +.++.+...+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 316 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMS-FVQTPLQLGI 316 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH-HhccHHHHHH
Confidence 1001111111111 11 11222334556677788889999999999998888877766665554 4455555555
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhh
Q psy17080 446 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLL 523 (565)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 523 (565)
..++.+++.+...+...+...+..|++.|++.+|+.+....+|..++|.+ ...+..++...|.+.+++.+++.+..++
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 66677788888788888888888999999999999999999999999998 3345668888899888888887776544
No 55
>PRK11043 putative transporter; Provisional
Probab=99.95 E-value=1.2e-24 Score=222.48 Aligned_cols=312 Identities=14% Similarity=0.065 Sum_probs=220.6
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.+.+.+++++ +..+.++..+++.++..++++++|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus 29 ~~~i~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 105 (401)
T PRK11043 29 FKAIQADLQT---SASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQA 105 (401)
T ss_pred HHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4667888998 8889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccchh
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPESPR 296 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pesp~ 296 (565)
++.+...+...+++.|+++++++++..+.......+|..+++.++..+ .+||+.|++.++..++..+..++++|+++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
T PRK11043 106 VGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKK 185 (401)
T ss_pred hhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 998888888888999999999998888888777788888887776653 48999999888777766666556665532
Q ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhh
Q psy17080 297 WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYG 376 (565)
Q Consensus 297 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (565)
. .+ ++ +++.++++++|+|.++...+...+........+..
T Consensus 186 ~----~~-~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (401)
T PRK11043 186 A----RK-QS-----------------------------------QDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTG 225 (401)
T ss_pred c----cc-cc-----------------------------------hHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00 00113455667776654443333222211111111
Q ss_pred hhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH---hhc-CCchHHHHHHHHH
Q psy17080 377 LVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMT---LGF-APGSFITISLAMV 449 (565)
Q Consensus 377 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~ 449 (565)
.+...++.+.+. ........++.+++.++.+++.||+++|+.........+++.+.+ ... .+..+.......+
T Consensus 226 ~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (401)
T PRK11043 226 SPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCV 305 (401)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 222333344433 223334455677788888999999999886655544443333222 211 2222333444555
Q ss_pred HHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 450 GKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 450 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.+++.+..++.......+..| +.++++.|+.++....++..++.+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~ 350 (401)
T PRK11043 306 MAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLL 350 (401)
T ss_pred HHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHH
Confidence 677777778888777777777 468999999999888777777776
No 56
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=8.9e-25 Score=223.22 Aligned_cols=347 Identities=13% Similarity=0.066 Sum_probs=230.3
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHH---h-cchhHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVA---I-SPWFELYLVVR 215 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~---~-~~~~~~l~~~r 215 (565)
.+.+.+|+++ +..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++++++. + .++++.+++.|
T Consensus 36 ~~~~~~~~g~---s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (402)
T TIGR00897 36 LSPFLKALGL---SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFY 112 (402)
T ss_pred HHHHHHHhCC---CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHH
Confidence 4566688898 888999999999999999999999999999999999999999988877653 3 35788889999
Q ss_pred HHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHH-HHHHHHHHHh---cchhHHHHHHHHHHHHHH-HHhhh
Q psy17080 216 FFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGY-IAISGIAYYS---HNWRLLQWVITIPTIFFL-TLWWI 290 (565)
Q Consensus 216 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~-~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~-~~~~~ 290 (565)
++.|++.+...+...+.+.+++++++|++++++.+.+.++|. ++++.++..+ .+|+..++......++.. +..++
T Consensus 113 ~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 192 (402)
T TIGR00897 113 GIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFS 192 (402)
T ss_pred HHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999888888888889999999999999999999999997 5677776543 365555444332222222 22333
Q ss_pred cccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHH
Q psy17080 291 MPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSV 370 (565)
Q Consensus 291 ~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 370 (565)
.++.++. .+.+ + + .+. ++....+++++|+|.++...+..++.....
T Consensus 193 ~~~~~~~--~~~~--~-------------~---~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (402)
T TIGR00897 193 NKDIFTP--QHMQ--T-------------R---EKF--------------SELGKAATILFTNPNVLLGGMVRIINTIGL 238 (402)
T ss_pred cCCCCCc--cccc--C-------------C---cch--------------hhHHHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 3433110 0000 0 0 000 000112446788888776655544433332
Q ss_pred HHhhhhhhhccCcCCCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHH-HHHHHHHHHHHHHhhc----CCchHH
Q psy17080 371 YLVYYGLVLNLSNIGGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLC-LTTLGAGLACLMTLGF----APGSFI 442 (565)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~-~~~~~~~~~~~~~~~~----~~~~~~ 442 (565)
.......+.+.++.+.+.. .......++.+++.++.+++.||++||+.+. .+.+..+++.+.+... ..+.+.
T Consensus 239 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 318 (402)
T TIGR00897 239 FGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAV 318 (402)
T ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHH
Confidence 2222223333444444332 3334556778899999999999999888654 2333333332222211 122334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHH
Q psy17080 443 TISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLS 520 (565)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~ 520 (565)
..+..++.+++.+...+ ......|..| +.|+++.|+.+....+|+.++|.+ ...+..++...+++.+++.+++.++
T Consensus 319 ~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~ 396 (402)
T TIGR00897 319 ALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFL 396 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 44445555665555434 3445567655 579999999999999999999988 4456678888888888888887777
Q ss_pred Hhhcc
Q psy17080 521 VLLLP 525 (565)
Q Consensus 521 ~~~l~ 525 (565)
..+++
T Consensus 397 ~~~~~ 401 (402)
T TIGR00897 397 TAFIR 401 (402)
T ss_pred HHHhc
Confidence 66553
No 57
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.94 E-value=1.2e-24 Score=222.92 Aligned_cols=316 Identities=12% Similarity=0.070 Sum_probs=225.3
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.+.+.+++++ +..+.++..+.+.+++.+++++.|+++||+|||++++.+.++.+++.+++.++++++.+++.|++.|
T Consensus 36 ~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 112 (406)
T PRK15402 36 MLAVVEDFNA---GAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQG 112 (406)
T ss_pred hHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 5667889998 8888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
++.+...+...+++.|++++++|.+..++......+|..++|.++..+ .+||+.+++.++..++..+. ++.+||++
T Consensus 113 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 113 IGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred hHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999988889999999999999999988888877778888888776553 48999999877776655543 44567764
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHh-h
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLV-Y 374 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~ 374 (565)
+.. ++ + .+ . ++...++++++++|.++...+...+........ .
T Consensus 193 ~~~---~~-~----------------~~--~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (406)
T PRK15402 193 GRV---GE-K----------------LS--L--------------KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIA 236 (406)
T ss_pred ccc---cc-c----------------cc--H--------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 310 00 0 00 0 000112456778887776555444333322111 1
Q ss_pred hhhhhccCcCCCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcC---C-chHHHHHHH
Q psy17080 375 YGLVLNLSNIGGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFA---P-GSFITISLA 447 (565)
Q Consensus 375 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~ 447 (565)
+...+.....+.+.. .......++.+++.++.+++.||+++|+.+..+.++.+++.+++.... . ..+......
T Consensus 237 ~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK15402 237 LSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGL 316 (406)
T ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHH
Confidence 112222222333322 222334456778889999999999999988888776666655544211 1 223334445
Q ss_pred HHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 448 MVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
++.+++.+...+......... +++.|++..++.++...+|..+++.+
T Consensus 317 ~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~ 363 (406)
T PRK15402 317 SLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIEL 363 (406)
T ss_pred HHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHH
Confidence 566677766666555554443 34789999999999999999999888
No 58
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.94 E-value=1.5e-24 Score=221.90 Aligned_cols=338 Identities=13% Similarity=0.055 Sum_probs=221.9
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|++.++++. +....++..++++++++++++++|+++||+|||++++.+.+++++++++++++++++.++++|+++|
T Consensus 39 l~~i~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 115 (413)
T PRK15403 39 IINVVRDFNA---DVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQG 115 (413)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 5678889998 8888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
++.+...+...+++.|++++++|+++.++...+..+|..+++.++..+ .+||+.|++.++..++..+. ++++||++
T Consensus 116 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 116 TSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 998877777788899999999999999999999999999988887654 48999999988876666554 45678874
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYY 375 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (565)
+. +++. . +. +.....+++++|+|.++...+...+.+........
T Consensus 196 ~~---~~~~-----------------~--~~--------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~ 239 (413)
T PRK15403 196 KR---GAVP-----------------F--SA--------------KSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVA 239 (413)
T ss_pred cc---cCCC-----------------C--Ch--------------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 30 0000 0 00 00011356678899888776665554444333222
Q ss_pred hhhhccC-cCCCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHh--h-cCCchH-HHHHHH
Q psy17080 376 GLVLNLS-NIGGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTL--G-FAPGSF-ITISLA 447 (565)
Q Consensus 376 ~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~--~-~~~~~~-~~~~~~ 447 (565)
..+.... ..+.+.. +.......+.+++..+.+.+.++..+++.......+..++..++. . ..++.+ ...+..
T Consensus 240 ~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~ 319 (413)
T PRK15403 240 VSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGT 319 (413)
T ss_pred hChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 2333333 3344432 222233445555566666655444443332222222222221111 0 122222 234455
Q ss_pred HHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhHHHHHHHHHHHH
Q psy17080 448 MVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL-WHMQSINIHFPMGLLGVVGVLG 517 (565)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i-~~~~~~~~~~~~~~~~~~~~i~ 517 (565)
++.+++.+...+......-+..+ ..+|++.++.+.....+..+++.. ......+...++...+++..+.
T Consensus 320 ~l~~~G~~~~~p~~~~~al~~~~-~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 320 SLYAFGIGLIFPTLFRFTLFSNN-LPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHHHHHHHhHHHHHHHhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 56667777776666643322212 236888888887777776666666 2233345556666665554443
No 59
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.94 E-value=7.9e-25 Score=226.14 Aligned_cols=361 Identities=12% Similarity=0.098 Sum_probs=230.7
Q ss_pred ccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHHhhh
Q psy17080 146 EWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS----PWFELYLVVRFFLGFF 221 (565)
Q Consensus 146 ~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~----~~~~~l~~~r~l~G~~ 221 (565)
++|+ +..+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.++. .+++.+.+.|++.|++
T Consensus 55 ~~g~---s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~ 131 (438)
T TIGR00712 55 EQGF---SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWF 131 (438)
T ss_pred HcCC---CHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHH
Confidence 3577 78889999999999999999999999999999999999999999998887764 4677888999999999
Q ss_pred hhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHH----hcchhHHHHHHHHHHHHHH-HHhhhcccchh
Q psy17080 222 CVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY----SHNWRLLQWVITIPTIFFL-TLWWIMPESPR 296 (565)
Q Consensus 222 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~----~~~Wr~~~~~~~~~~~~~~-~~~~~~pesp~ 296 (565)
.+...+.....+.|++|+++|+++.++.+.+..+|..+++.+... ..+||+.|++.++..++.. +.++++||+|+
T Consensus 132 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 132 QGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred hhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 999989889999999999999999999999999998887765432 2489999999888766644 44666788875
Q ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHH-hhh
Q psy17080 297 WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYL-VYY 375 (565)
Q Consensus 297 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~ 375 (565)
....+...++ + + +.+.+. .+ +.+.+.+.+....+.++|++.++...+...+.+..... ..+
T Consensus 212 ~~~~~~~~~~-~---------~--~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (438)
T TIGR00712 212 SCGLPPIEEY-R---------N--DYPDDY----NE--KAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDW 273 (438)
T ss_pred hcCCCCchhc-c---------c--cccccc----cc--ccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHh
Confidence 3211000000 0 0 000000 00 00000000001112467888877776655554443222 223
Q ss_pred hhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHH--H-HHHHHHhhcCC--chHHHHHHH
Q psy17080 376 GLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGA--G-LACLMTLGFAP--GSFITISLA 447 (565)
Q Consensus 376 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~--~-~~~~~~~~~~~--~~~~~~~~~ 447 (565)
...+..+..+.+ ......+.++..+++.++++++.||+++++....+.... . ++.+.+. ..+ +.+......
T Consensus 274 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 352 (438)
T TIGR00712 274 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYW-MNPAGNPLVDMICM 352 (438)
T ss_pred HHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHH-hcCCCchHHHHHHH
Confidence 223322223333 234455667778899999999999996433222222211 1 1112111 211 222222222
Q ss_pred HHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHH-HHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH-hh
Q psy17080 448 MVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVAL-ILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSV-LL 523 (565)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~-~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~-~~ 523 (565)
+..+++.............|.+|++.|+++.|+.+..+.+|+ +++|.+ ...+..++...+.+.+++.+++.+.. +.
T Consensus 353 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T TIGR00712 353 IVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 432 (438)
T ss_pred HHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 233332222222223467799999999999999998888775 578887 33466677777777777666665544 56
Q ss_pred cccCC
Q psy17080 524 LPDTT 528 (565)
Q Consensus 524 l~et~ 528 (565)
+||.|
T Consensus 433 ~~~~~ 437 (438)
T TIGR00712 433 MIGEK 437 (438)
T ss_pred Hhhcc
Confidence 67655
No 60
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.94 E-value=1.3e-24 Score=220.54 Aligned_cols=318 Identities=14% Similarity=0.201 Sum_probs=221.1
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++|+ +..+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|
T Consensus 14 ~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g 90 (377)
T PRK11102 14 LPVIAADFGV---SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHG 90 (377)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 6778889999 8889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
++.+...+...+++.|++++++|+++.++...+..+|..+++.++..+ .+||+.|++.++..++..+. .+++||++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 91 LAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999999999999999999999999999999999999999988887654 48999999887776655443 45677754
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhh-
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVY- 374 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~- 374 (565)
+. +++ .+ .+.. +...+++++++++..+...+...+.........
T Consensus 171 ~~---~~~----------------~~--~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (377)
T PRK11102 171 PK---ERR----------------QP--FHLR--------------TTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLT 215 (377)
T ss_pred cc---ccc----------------CC--CChH--------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 20 000 00 0000 001124456777776655444433332222111
Q ss_pred hhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhh--cCC-chHHHHHHHH
Q psy17080 375 YGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLG--FAP-GSFITISLAM 448 (565)
Q Consensus 375 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~ 448 (565)
+...+..+..+.+ ........++..+++.++.+++.||+|||+.+..+..+..+..+.+.. ..+ ..+...+...
T Consensus 216 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (377)
T PRK11102 216 AGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVA 295 (377)
T ss_pred cCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 1112222223333 234455666778889999999999999999888777654433222211 112 2222222333
Q ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHH-HHHHHHHHHHH
Q psy17080 449 VGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA-GVALILIPYLW 496 (565)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~-~lg~~i~p~i~ 496 (565)
+...+.+...+....+..|..| +.++++.++.+... .+|..+++++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 296 AFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444455566778777 67899999876654 46777777663
No 61
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.94 E-value=8.2e-25 Score=223.16 Aligned_cols=312 Identities=19% Similarity=0.179 Sum_probs=211.0
Q ss_pred HHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhH--------HHHHHHHHHhhhhhhhHhhhhhhhcc
Q psy17080 164 FLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFE--------LYLVVRFFLGFFCVSIVFSGFVLCME 235 (565)
Q Consensus 164 ~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~e 235 (565)
.+++..+++++.|+++||+|||++++.+.++..++.++++++++++ .+++.|+++|++.+...+...+++.|
T Consensus 44 ~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 123 (394)
T TIGR00883 44 GFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAE 123 (394)
T ss_pred HHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhh
Confidence 3344457999999999999999999999999999999999998875 48899999999999999999999999
Q ss_pred ccccchhHHHHHHhhhhhHHHHHHHHHHHHHh-----------cchhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCH
Q psy17080 236 LVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS-----------HNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRN 304 (565)
Q Consensus 236 ~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~-----------~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~ 304 (565)
++++++|++..++...+..+|.++++.++... .+||+.+++.++..++.......+||+|++...++
T Consensus 124 ~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 201 (394)
T TIGR00883 124 YAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQE-- 201 (394)
T ss_pred cCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHh--
Confidence 99999999999999999999999888765432 37999999887776666655566777764311100
Q ss_pred HHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHH--HHHHHHHHHHHHHHHHHh-hhhhhhcc
Q psy17080 305 KEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPL--IRLISFVQYIIWFSVYLV-YYGLVLNL 381 (565)
Q Consensus 305 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~ 381 (565)
++++.+.+.++.++++. ++.......+........ .+...+..
T Consensus 202 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (394)
T TIGR00883 202 ----------------------------------KHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLT 247 (394)
T ss_pred ----------------------------------ccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011223444555543 333333333222222222 12222222
Q ss_pred CcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHH-HHHhhcC--CchHHHHHHHHHHHHHHH
Q psy17080 382 SNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLAC-LMTLGFA--PGSFITISLAMVGKFAIS 455 (565)
Q Consensus 382 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~ 455 (565)
...+.+ .........+..+++.++.+++.||+|||+.+.....+..+.. ....... .+.+......++.+++.+
T Consensus 248 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 327 (394)
T TIGR00883 248 QTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGG 327 (394)
T ss_pred HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 223322 2334455667788889999999999999997775554443332 2222121 223444445566677777
Q ss_pred HHHHHHHHhcccccchhhhhhHHHHH-HHHHHHHHHHHHHH--HHHHHhh-hhhHHHHHH
Q psy17080 456 SSNVIIPIYTAELFPTKMRNLGVGAS-SVPAGVALILIPYL--WHMQSIN-IHFPMGLLG 511 (565)
Q Consensus 456 ~~~~~~~~~~~e~~p~~~r~~~~g~~-~~~~~lg~~i~p~i--~~~~~~~-~~~~~~~~~ 511 (565)
...+...++..|.+|++.|+++.|+. ++...+|+.++|.+ ...+..+ +...++...
T Consensus 328 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 328 MYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLA 387 (394)
T ss_pred HHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHH
Confidence 77888899999999999999999985 45566788888888 3344445 343333333
No 62
>PRK10133 L-fucose transporter; Provisional
Probab=99.94 E-value=1.9e-24 Score=222.15 Aligned_cols=336 Identities=12% Similarity=0.018 Sum_probs=229.2
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHH---HhcchhHHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLV---AISPWFELYLVVRF 216 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~---~~~~~~~~l~~~r~ 216 (565)
.|.+.+++++ +..+.++..+.+.+++.+++++.|+++||+|||+++..+.++++++.+++ .++++++.+++.|+
T Consensus 49 ~p~i~~~~~~---s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~ 125 (438)
T PRK10133 49 LPQFQQAFTL---TNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLF 125 (438)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 6788899999 88999999999999999999999999999999999999999999999875 56899999999999
Q ss_pred HHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh-----------------------------
Q psy17080 217 FLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----------------------------- 267 (565)
Q Consensus 217 l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----------------------------- 267 (565)
++|+|.+...+....++.|+.++++|...+++.+..+.+|..+++.++..+
T Consensus 126 l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~ 205 (438)
T PRK10133 126 IIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLV 205 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHH
Confidence 999999999999999999987777777778888888888888887665321
Q ss_pred cchhHHHHHHH-HHHHHHHHH-hhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCccc
Q psy17080 268 HNWRLLQWVIT-IPTIFFLTL-WWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKV 345 (565)
Q Consensus 268 ~~Wr~~~~~~~-~~~~~~~~~-~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (565)
.+||++|+... +..++.++. ...+||.+. +++ .+.+..+...
T Consensus 206 ~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~~~--------------------------------~~~~~~~~~~ 249 (438)
T PRK10133 206 LSVQTPYMIIVAIVLLVALLIMLTKFPALQS----DNH--------------------------------SDAKQGSFSA 249 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----ccc--------------------------------ccccccchhh
Confidence 24666665433 333222222 223444211 000 0000000112
Q ss_pred chhhccccHHHHHHHHHHHHHHHHHHHhh-hhhhhcc-CcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHH
Q psy17080 346 QVMDLWRTPLIRLISFVQYIIWFSVYLVY-YGLVLNL-SNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLC 420 (565)
Q Consensus 346 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~ 420 (565)
+.++++++|.++...+..++........+ |...+.. +..+.+. ........++.+++.++++++.||+|+|+++.
T Consensus 250 ~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~ 329 (438)
T PRK10133 250 SLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLA 329 (438)
T ss_pred hHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 34567888887765554443333322222 2222222 2334443 34456667788899999999999999999988
Q ss_pred HHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH-H-HH
Q psy17080 421 LTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL-W-HM 498 (565)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i-~-~~ 498 (565)
.+.++.++.+++.. +.++. .......+.+++.+..+|..++...+..|++ .+.+.++..+ ..+|+.++|.+ . ..
T Consensus 330 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~ 405 (438)
T PRK10133 330 AYALIAMALCLISA-FAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVS 405 (438)
T ss_pred HHHHHHHHHHHHHH-HcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHH
Confidence 88777666655554 43433 2344566788999999999999999998864 5677777754 44566666655 2 23
Q ss_pred HHhh-hhhHHHHHHHHHHHHH
Q psy17080 499 QSIN-IHFPMGLLGVVGVLGG 518 (565)
Q Consensus 499 ~~~~-~~~~~~~~~~~~~i~~ 518 (565)
+..+ ....+++..++.+...
T Consensus 406 ~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 406 DAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HhccchHHHHHHHHHHHHHHH
Confidence 4444 4555655444444333
No 63
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.94 E-value=2e-24 Score=220.20 Aligned_cols=312 Identities=14% Similarity=0.121 Sum_probs=213.2
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++++ +..+.++..+.+.++..+++++.|+++||+|||++++.+.++.+++.+++.++++++.+++.|+++|
T Consensus 26 lp~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g 102 (392)
T PRK10473 26 LPRIAADLNA---SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQG 102 (392)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 6788899998 8888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pesp 295 (565)
++.+...+...+++.|++++++|+++.++.+....+|.++++.++..+ .+||+.+++.++..++..+. .+++||++
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 103 IGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999998889988888887654 48999999887766555443 45667763
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHH-Hhh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVY-LVY 374 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~ 374 (565)
+. +.+ + + . ......++.++++.++...+...+.+.... ...
T Consensus 183 ~~---~~~--~--------------~--~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (392)
T PRK10473 183 PA---RAP--A--------------A--S-----------------SKPRENSESLLNRFFLSRLVITTLSVTVILTFVN 224 (392)
T ss_pred Cc---ccC--C--------------c--c-----------------chHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 000 0 0 0 000112344566665544443333222211 111
Q ss_pred hhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 375 YGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 375 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
+...+.....+.+. .......++..+++.++.+++.||+|||+.+..+..+..++.+.+. +.+..+.......+..
T Consensus 225 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 303 (392)
T PRK10473 225 TSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLA-LSPSHAVSLFGITLIC 303 (392)
T ss_pred hCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 11112222333332 2344456677888999999999999999998888877777666655 3333333333333333
Q ss_pred HHHHHHHHHHHHhcccccchhhh-hhHHHHHHHHHHHHHHHHHHH
Q psy17080 452 FAISSSNVIIPIYTAELFPTKMR-NLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~r-~~~~g~~~~~~~lg~~i~p~i 495 (565)
.+.+..++.. ...++.|.+.| +.+.++..+...+|+.+++.+
T Consensus 304 ~g~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l 346 (392)
T PRK10473 304 AGFSVGFGVA--MSQALGPFSLRAGVASSTLGIAQVCGSSLWIWL 346 (392)
T ss_pred HHHHHHhHHH--HHHHhccCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 4444433333 33444454443 444444454555555555555
No 64
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=1.8e-24 Score=220.46 Aligned_cols=335 Identities=12% Similarity=0.081 Sum_probs=229.5
Q ss_pred eeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhh
Q psy17080 143 IISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFC 222 (565)
Q Consensus 143 i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 222 (565)
+.+++++ +..+.|++.+.+.++..+.+++.|+++||+|||++++.+.++.+++.+++.++++++.+++.|++.|++.
T Consensus 37 ~~~~~g~---s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~ 113 (400)
T PRK11646 37 FVDQLGW---AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGG 113 (400)
T ss_pred HHHHhCC---cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4567888 8889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh--cchhHHHHHHHHHHHHHHHH-hhhcccchhHHH
Q psy17080 223 VSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS--HNWRLLQWVITIPTIFFLTL-WWIMPESPRWLV 299 (565)
Q Consensus 223 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~--~~Wr~~~~~~~~~~~~~~~~-~~~~pesp~~l~ 299 (565)
+...+...+++.|++|+++|+++.++......+|..+++.++..+ .+||+.|++.++..++..+. .+++||.+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~--- 190 (400)
T PRK11646 114 TLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPAYKL--- 190 (400)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCcccc---
Confidence 888899999999999999999999999998889888888777654 48999999887765554433 444555210
Q ss_pred hcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy17080 300 SMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVL 379 (565)
Q Consensus 300 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (565)
.+. .+ +.+.++++++++|.++...+.....+..........+.
T Consensus 191 --~~~------------------~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 233 (400)
T PRK11646 191 --STV------------------RT-----------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPI 233 (400)
T ss_pred --ccc------------------ch-----------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 000 00 00112445667776654433332222221111122333
Q ss_pred ccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHH-hhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH
Q psy17080 380 NLSNIGGDV---YLNTIISGIVEFPAIVISIFIL-LKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAIS 455 (565)
Q Consensus 380 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~-dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (565)
+.++.+.+. .....+.++..+.+....+.+. ||++.++.+..+.++.+++.+++. ..++.+...+..++.+.+.+
T Consensus 234 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~l~~~g~~ 312 (400)
T PRK11646 234 MVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIG-MVSNLQQLFTLICLFYIGSI 312 (400)
T ss_pred hHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHH
Confidence 333332222 2222333344443333334444 556666666666666666665554 44444444444455566666
Q ss_pred HHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHh---h-hhhHHHHHHHHHHHHHHHH
Q psy17080 456 SSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSI---N-IHFPMGLLGVVGVLGGLSV 521 (565)
Q Consensus 456 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~---~-~~~~~~~~~~~~~i~~~~~ 521 (565)
...+...++..+..|++.|+++.|+.+....+|..++|.+ ...+.. + ...++++.+++.+++.+..
T Consensus 313 ~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 313 IAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred HHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 6677788999999999999999999999999999999988 333332 1 3455555555555554443
No 65
>KOG2533|consensus
Probab=99.94 E-value=2e-25 Score=226.87 Aligned_cols=330 Identities=18% Similarity=0.200 Sum_probs=241.6
Q ss_pred eeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhh
Q psy17080 143 IISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFC 222 (565)
Q Consensus 143 i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 222 (565)
+.+|.++ ...+.+.+.++|+++++++.+++|.+.||++-.+.+....+.+++.+++....+|++.+++.|++.|+.+
T Consensus 72 ~~edl~~---~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~e 148 (495)
T KOG2533|consen 72 LKEDLKL---VGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFE 148 (495)
T ss_pred Cccccch---hhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 4456666 6677899999999999999999999999999999999999999999988888999999999999999999
Q ss_pred hhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---------cchhHHHHHHHHHHHHHHHH-hhhcc
Q psy17080 223 VSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---------HNWRLLQWVITIPTIFFLTL-WWIMP 292 (565)
Q Consensus 223 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---------~~Wr~~~~~~~~~~~~~~~~-~~~~p 292 (565)
+..+|....++..|+.+++|++.++++.+...+|.++++++++.+ .||||.|++.+++.++..++ ++++|
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 999999999999999999999999999999999999999998872 48999999998887776654 67789
Q ss_pred cchh--HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHH
Q psy17080 293 ESPR--WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSV 370 (565)
Q Consensus 293 esp~--~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 370 (565)
+.|. |...+.+.+-+ .++.++.+ .+...++.+...+++.+++|..+...+..++.....
T Consensus 229 ~~P~~~~fl~~~ek~~~---~~~~~~~~----------------~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~ 289 (495)
T KOG2533|consen 229 DNPSKAWFLTDEEKELV---VERLRESP----------------SGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVN 289 (495)
T ss_pred CChhhccccchHHHHHH---HHHHHhcc----------------CCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhcc
Confidence 9986 32222111111 11111111 111111145567889999999999999999888887
Q ss_pred HHhhhhhhhccCc-CCC---cHHHHHHHHHHHHHHHHHHHHHHHhh----cCChHHHHHHHHHHHHHH-HHHhhcCCchH
Q psy17080 371 YLVYYGLVLNLSN-IGG---DVYLNTIISGIVEFPAIVISIFILLK----MGRRRPLCLTTLGAGLAC-LMTLGFAPGSF 441 (565)
Q Consensus 371 ~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~l~dr----~grr~~l~~~~~~~~~~~-~~~~~~~~~~~ 441 (565)
+...+..++++.+ .+. +.........++++++.+++++++|| ..+|......+.+..+.. ..+. ......
T Consensus 290 ~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~-~~~~~~ 368 (495)
T KOG2533|consen 290 YGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLL-AAAVLP 368 (495)
T ss_pred ccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH-hhccch
Confidence 7555555555554 222 23344566778899999999999999 556665555555544433 3333 333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHH-HHHHHHHHHHHHHHHHH
Q psy17080 442 ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGV-GASSVPAGVALILIPYL 495 (565)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~-g~~~~~~~lg~~i~p~i 495 (565)
......+.+.++.....+.....+++....+.|.... +........+++++|.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~ 423 (495)
T KOG2533|consen 369 GAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQL 423 (495)
T ss_pred HHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhh
Confidence 4444445555556666677777777777665544444 44455566777777777
No 66
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.94 E-value=1.8e-24 Score=221.34 Aligned_cols=346 Identities=11% Similarity=0.045 Sum_probs=228.5
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccc-hhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGR-KKALMGSLVFQLVLGVLVAISPWFELYLVVRFFL 218 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Gr-r~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~ 218 (565)
.+.+.+++++ +..++|++.+++.++.+++++++|.++||+|| |+++.++.++.+++..+..+.++++.+++.|++.
T Consensus 26 ~~~l~~~~g~---s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (418)
T TIGR00889 26 GSYMSKTLHF---SGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLAN 102 (418)
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3445667888 88999999999999999999999999999965 7788888888888888888999999999999999
Q ss_pred hhhhhhhHhhhhhhhc--------cccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH
Q psy17080 219 GFFCVSIVFSGFVLCM--------ELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL 287 (565)
Q Consensus 219 G~~~~~~~~~~~~~i~--------e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~ 287 (565)
|++.+...+...++.. |......|.+..+ .+|.++++.++..+ .+|+. |++.++..++..+.
T Consensus 103 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~~-f~~~~~~~~~~~~~ 175 (418)
T TIGR00889 103 SLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNIQ-LYITAGSSALLGVF 175 (418)
T ss_pred HHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhHH-HHHHHHHHHHHHHH
Confidence 9987777666554432 2233233444433 24444444444433 23443 45555555555555
Q ss_pred hhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHH
Q psy17080 288 WWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIW 367 (565)
Q Consensus 288 ~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 367 (565)
.+++||+|+- +++.++ +. ++..+.+.++++|+|.++..++..++..
T Consensus 176 ~~~~~e~~~~---~~~~~~------------------~~-------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 221 (418)
T TIGR00889 176 ALTLPDIPVA---KSTAKM------------------SI-------------KVMLGLDAFILFKNKRMAIFFFFSMLLG 221 (418)
T ss_pred HhcCCCCCCC---cccccc------------------CH-------------HHHhhhhHHHHhcCCCeeeHHHHHHHHH
Confidence 6678887530 000000 00 0000112345677777666555555544
Q ss_pred HHHHHhhhhhhhccCcCC-----------CcHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc
Q psy17080 368 FSVYLVYYGLVLNLSNIG-----------GDVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF 436 (565)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~ 436 (565)
......+...+.+..+.+ ........+..+.++++.+..+++.||+|||+.+..+.++.+++..++...
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~ 301 (418)
T TIGR00889 222 APLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYG 301 (418)
T ss_pred hHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 333222211122222222 122445556667888899999999999999999999998888776666522
Q ss_pred CCch---HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHH-HHHHHHHHHHHHH--HHHHH------hhhh
Q psy17080 437 APGS---FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASS-VPAGVALILIPYL--WHMQS------INIH 504 (565)
Q Consensus 437 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~-~~~~lg~~i~p~i--~~~~~------~~~~ 504 (565)
.... +...+..++.+++.+...+....++.|.+|++.|+++.|+.+ +...+|.+++|.+ ...+. .+|.
T Consensus 302 ~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~ 381 (418)
T TIGR00889 302 DPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQ 381 (418)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchH
Confidence 2211 233444566677777777788889999999999999999997 5678899999988 33344 2466
Q ss_pred hHHHHHHHHHHHHHHH-HhhcccCCC
Q psy17080 505 FPMGLLGVVGVLGGLS-VLLLPDTTG 529 (565)
Q Consensus 505 ~~~~~~~~~~~i~~~~-~~~l~et~~ 529 (565)
..|.+.+++.++++++ .++++|+++
T Consensus 382 ~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 382 TMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 7787777777666554 467788776
No 67
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=3.2e-24 Score=218.14 Aligned_cols=333 Identities=11% Similarity=-0.006 Sum_probs=236.0
Q ss_pred ceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhh
Q psy17080 142 TIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFF 221 (565)
Q Consensus 142 ~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~ 221 (565)
.+.+++|+ +..+.|++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.+++++++.+++.|++.|.+
T Consensus 33 ~l~~~~g~---s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 109 (395)
T PRK10054 33 YLSRQYSL---SVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCA 109 (395)
T ss_pred HHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34567898 889999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh--cchhHHHHHHHHHHHHHHHH-hhhcccchhHH
Q psy17080 222 CVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS--HNWRLLQWVITIPTIFFLTL-WWIMPESPRWL 298 (565)
Q Consensus 222 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~--~~Wr~~~~~~~~~~~~~~~~-~~~~pesp~~l 298 (565)
.+...+...++..|..++++|+++.++.....++|.++++.++..+ .+|+..|++.++..++.++. .+++||+++-
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~- 188 (395)
T PRK10054 110 YSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSEKA- 188 (395)
T ss_pred HHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccccc-
Confidence 8888888899999999999999999999999999999988887664 48999999887776665443 3445554210
Q ss_pred HhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy17080 299 VSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLV 378 (565)
Q Consensus 299 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (565)
++ ++. ++..+.++++|+|.++...+..++..+..........
T Consensus 189 ---~~-~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 230 (395)
T PRK10054 189 ---IA-TET----------------------------------GSVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCIS 230 (395)
T ss_pred ---cc-cch----------------------------------hhhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHH
Confidence 00 000 0001124567777776666554443333221111111
Q ss_pred hc---cCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC-chHHHHHHHHHHH
Q psy17080 379 LN---LSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP-GSFITISLAMVGK 451 (565)
Q Consensus 379 ~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 451 (565)
.+ ..+.+.+. .......++..++.....+.+.||.++|+.+..+..+.+++...+. +.. +.+...+...+.+
T Consensus 231 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 309 (395)
T PRK10054 231 QYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFI-FSGNSLLLWGMSAAVFT 309 (395)
T ss_pred HHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHH-HcchHHHHHHHHHHHHH
Confidence 11 12222222 2233333444455567778999999999998888877777766555 332 3344445566667
Q ss_pred HHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHH
Q psy17080 452 FAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGG 518 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~ 518 (565)
++.....+....++.+..|++.|+++.+..+ ...+|..++|.+ ...+..++...+.+.+++..++.
T Consensus 310 ~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~ 377 (395)
T PRK10054 310 VGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAW 377 (395)
T ss_pred HHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHH
Confidence 7776666777888999999999999988765 566899999988 44566666666666555444433
No 68
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.94 E-value=5.7e-24 Score=216.69 Aligned_cols=310 Identities=13% Similarity=0.037 Sum_probs=224.8
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHh---cchhHHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAI---SPWFELYLVVRF 216 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~---~~~~~~l~~~r~ 216 (565)
.|.+++++++ +..+.|++.+.+.+++.+++++.|++.||+|||++++.+.++++++.++... .++++.+++.|+
T Consensus 26 ~~~~~~~~~~---s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~ 102 (410)
T TIGR00885 26 VPQFQQAFTL---TAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLF 102 (410)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 6788899999 8889999999999999999999999999999999999999999999888644 468999999999
Q ss_pred HHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh-----------------------------
Q psy17080 217 FLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----------------------------- 267 (565)
Q Consensus 217 l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----------------------------- 267 (565)
+.|+|.+...+....++.+..|+++|++..++.+....+|..+++.++..+
T Consensus 103 l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (410)
T TIGR00885 103 ILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDL 182 (410)
T ss_pred HHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988888888888776533
Q ss_pred cchhHHHHHHHHHHHHHHHHhhh--cccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCccc
Q psy17080 268 HNWRLLQWVITIPTIFFLTLWWI--MPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKV 345 (565)
Q Consensus 268 ~~Wr~~~~~~~~~~~~~~~~~~~--~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (565)
.+||++|++.+++.++..+...+ .||.++ ++ +++.....
T Consensus 183 ~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~--------~~-------------------------------~~~~~~~~ 223 (410)
T TIGR00885 183 ASVQTPYMIIGAVVLAVALLIMLTKMPALNH--------SD-------------------------------AKQISFSA 223 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--------cc-------------------------------cccccchh
Confidence 25999999888776655444433 333210 00 00000111
Q ss_pred chhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcC--CCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHH
Q psy17080 346 QVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNI--GGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLC 420 (565)
Q Consensus 346 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~ 420 (565)
+.++++|+|.++...+..++........+..+..+..+. +.+.. ...........+|+++++++.||+++|+.+.
T Consensus 224 ~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~ 303 (410)
T TIGR00885 224 SLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLM 303 (410)
T ss_pred hHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 334567788777655554443333322222222222211 11111 1122233556789999999999999999988
Q ss_pred HHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 421 LTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
+..++.++.+++.. +.++.. ......+.+++.+..+|..++...+..+++.+..+.++.... +|+.+.|.+
T Consensus 304 i~~~~~~~~~ll~~-~~~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l 374 (410)
T TIGR00885 304 AYAIIGMALCLGSI-FAGGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPL 374 (410)
T ss_pred HHHHHHHHHHHHHH-HcCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHH
Confidence 88888887777776 444433 345556677888888999999999999987654455554433 888888888
No 69
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.93 E-value=2.4e-23 Score=211.97 Aligned_cols=339 Identities=16% Similarity=0.171 Sum_probs=218.7
Q ss_pred ceeeccccccCcchhhHHHHHHH-HHHHhhhhhhhhcccccccchhhH-HHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 142 TIISEWDLVCSNSSLESLAEMVF-LLGVAFGGFFSGLVSDKFGRKKAL-MGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 142 ~i~~~~~l~c~~~~~~~l~~s~~-~lg~~ig~~~~G~l~Dr~Grr~~l-~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.+.+|+++ +..+.|++.+.. ..++.++.++.|+ +||+|||+.+ +.+.++.+++.++.+++++++.+++.+.+.|
T Consensus 41 ~l~~~~~~---s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 116 (393)
T PRK15011 41 FLTDEVHA---RPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLS 116 (393)
T ss_pred HHHhhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35678898 888899997765 4566667766666 9999999875 5566666778888889999998877666555
Q ss_pred hhhhhhHhhhhhhhccccccchh--HHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhccc
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWL--TIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPE 293 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r--~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pe 293 (565)
...+...+....++.|+.+++.| +...+..+.+.++|.++++.++..+ .|||..|++.++..++..+. ++++||
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 196 (393)
T PRK15011 117 SFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPS 196 (393)
T ss_pred HHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 55567788888888888876655 3456788888889999998888765 39999999988776655544 455787
Q ss_pred chhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHh
Q psy17080 294 SPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLV 373 (565)
Q Consensus 294 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 373 (565)
.++- +++ + + ++. ...++ +.+..+.........+......
T Consensus 197 ~~~~---~~~--~----------------~------------~~~------~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 235 (393)
T PRK15011 197 MRKE---LPL--A----------------T------------GTL------EAPRR--NRRDTLLLFVICTLMWGTNSLY 235 (393)
T ss_pred cCCC---Ccc--c----------------c------------ccc------ccccc--ccccHHHHHHHHHHHHHHHHHH
Confidence 6420 000 0 0 000 00000 0111222222222233222222
Q ss_pred hhhhhhcc-CcCCCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q psy17080 374 YYGLVLNL-SNIGGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMV 449 (565)
Q Consensus 374 ~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (565)
....+.+. +.++.+.. .......+..+++.++.+++.||++||+.+..+.....+.+.... ...+.+...+..++
T Consensus 236 ~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l 314 (393)
T PRK15011 236 IINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGML-MAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHH
Confidence 22222222 23333322 223334455677889999999999999987766555544443333 33333444444445
Q ss_pred HHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhcccC
Q psy17080 450 GKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLPDT 527 (565)
Q Consensus 450 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et 527 (565)
.++..+...+....+..|.+|++ |+++.++.+....+|..++|.+ ...+..++...+.+.+++.+++.+..+.+||+
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKDV 393 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 55555555566667788999864 8999999988889999999988 33455678788888888888877777777764
No 70
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.93 E-value=1.7e-23 Score=213.62 Aligned_cols=314 Identities=11% Similarity=0.010 Sum_probs=217.1
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.+++++ +..+.+++.+++.+++.+++++.|+++||+|||++++.+.++..++.+++.++++++.+++.|++.|
T Consensus 31 ~~~i~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 107 (394)
T PRK11652 31 IADMARDLNV---REGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQG 107 (394)
T ss_pred HHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 5778889999 8889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHH-HHhhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFL-TLWWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~-~~~~~~pesp 295 (565)
++.+...+....+..|.+++++|+++.+....+..+|..+++.++..+ .+||+.|++.++..++.. +..+++||++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 108 LGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred hhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 998888888888899999999999999999999999998888877654 489999998877655443 3355678764
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYY 375 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (565)
+.. .+.++ ....+++.+++|.++...+..............
T Consensus 188 ~~~---~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (394)
T PRK11652 188 PAD---ARRTR------------------------------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEA 228 (394)
T ss_pred ccc---cchhH------------------------------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHH
Confidence 310 00000 011244566777766554433332222221111
Q ss_pred hhh-hccCcCCCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc--CCchHHHHHHHHH
Q psy17080 376 GLV-LNLSNIGGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF--APGSFITISLAMV 449 (565)
Q Consensus 376 ~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 449 (565)
... +..+..+.+.. .......++.+++.++.+++.||.+++........+.+......... ..+.+......++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (394)
T PRK11652 229 CSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAAL 308 (394)
T ss_pred hChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 111 11122333332 22233344555666667777777763332222222222122111111 1233445555666
Q ss_pred HHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy17080 450 GKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW 496 (565)
Q Consensus 450 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~ 496 (565)
.+++.+...+....+..|.+| +.++++.++.+....+|+.+++.+.
T Consensus 309 ~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~ 354 (394)
T PRK11652 309 FFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLS 354 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 777888888888888889888 4679999999999999999999873
No 71
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.93 E-value=1.9e-23 Score=211.84 Aligned_cols=338 Identities=10% Similarity=-0.002 Sum_probs=242.1
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHH-HHHHHH-HHHHhcchhHHHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLV-FQLVLG-VLVAISPWFELYLVVRFF 217 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~-l~~~~~-~~~~~~~~~~~l~~~r~l 217 (565)
.|.+.+|+++ +..++|++.+++.++..++++++|+++||+|||........ ...+.. ..+.++++++.+++.|++
T Consensus 27 l~~~l~~~g~---s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l 103 (382)
T TIGR00902 27 FPAWLKGIGL---GEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGL 103 (382)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 5677888999 89999999999999999999999999999998543322211 111222 244567899999999999
Q ss_pred HhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccc
Q psy17080 218 LGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPES 294 (565)
Q Consensus 218 ~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pes 294 (565)
+|.+.+...+...++..++ .++|++..+....+.++|.++++.++..+ .|||..|++..+..++.++ .+.++|+
T Consensus 104 ~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~ 180 (382)
T TIGR00902 104 FALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPT 180 (382)
T ss_pred HHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCC
Confidence 9999888888888887665 46788888888888889999988876654 4899998886655333333 3333433
Q ss_pred h-hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHh
Q psy17080 295 P-RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLV 373 (565)
Q Consensus 295 p-~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 373 (565)
+ +. ++ + ++++.+...+.++++|+|+++...+..++.+......
T Consensus 181 ~~~~----~~-~-------------------------------~~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~ 224 (382)
T TIGR00902 181 IPPK----DA-I-------------------------------PEDESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAY 224 (382)
T ss_pred CCCC----cc-c-------------------------------cccccccchhHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 1 10 00 0 0000011223567889999888877766666554444
Q ss_pred hhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHH
Q psy17080 374 YYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVG 450 (565)
Q Consensus 374 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (565)
+...+.+.++.+.+. .....+..+.++++.++.+++.||+|+|+.+.++.+..++..+++. +.++.+..+...++.
T Consensus 225 ~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~q~l~ 303 (382)
T TIGR00902 225 YGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIG-AIEAFPLIFLLQILH 303 (382)
T ss_pred HHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHH-hHhhHHHHHHHHHHH
Confidence 333344444555443 3344456677888899999999999999999999999988887776 666667777778888
Q ss_pred HHHHHHHHHHHHHhcccccchhhhhhHHHHHH-HHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHh
Q psy17080 451 KFAISSSNVIIPIYTAELFPTKMRNLGVGASS-VPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVL 522 (565)
Q Consensus 451 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~-~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~ 522 (565)
++..+...+....++.+. |++.|+++.++.+ +...+|..++|.+ ...+..+. ..|.+.+++++++.++..
T Consensus 304 g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 304 CGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLIP 376 (382)
T ss_pred HHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999988 9999999999986 4567888888888 34455554 557777777766654433
No 72
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.93 E-value=2.6e-23 Score=216.84 Aligned_cols=348 Identities=10% Similarity=0.089 Sum_probs=233.9
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccc-----cchhh-HHHHHHHHHHHHHHHHhc---chhHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKF-----GRKKA-LMGSLVFQLVLGVLVAIS---PWFEL 210 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~-----Grr~~-l~~~~~l~~~~~~~~~~~---~~~~~ 210 (565)
.+...++.|. +..+++.. +.....+ ++.+++|+++||+ |||+. ++.+.++.+++.+++++. ++++.
T Consensus 35 l~~~l~~~g~---~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~ 109 (491)
T PRK11010 35 LQAWMTVENI---DLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRW 109 (491)
T ss_pred HHHHHHhCCC---CHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHH
Confidence 3445555666 66666765 4444444 6889999999999 99985 667777777777777775 47888
Q ss_pred HHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHH
Q psy17080 211 YLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLT 286 (565)
Q Consensus 211 l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~ 286 (565)
+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+ .+||..|++.++..++..+
T Consensus 110 l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l 189 (491)
T PRK11010 110 LAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCII 189 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988776543 3799999998887777666
Q ss_pred HhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHH
Q psy17080 287 LWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYII 366 (565)
Q Consensus 287 ~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (565)
..+++||+++.. .+.++. + +....+++++++++..+...+..++.
T Consensus 190 ~~~~~~e~~~~~---~~~~~~-----------------------~---------~~~~~~l~~~~~~~~~~~~ll~~~l~ 234 (491)
T PRK11010 190 ATLLAPEPTDTI---PVPKTL-----------------------E---------QAVVAPLRDFFGRNNAWLILLLIVLY 234 (491)
T ss_pred HHHhcCCCcccc---ccccch-----------------------h---------hhHHHHHHHHHcCcCHHHHHHHHHHH
Confidence 666678875310 000000 0 00011244556666555444433333
Q ss_pred HHHHHHhh-hhhhhccCcCCCcHHH---HH-HHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHh--hcC-C
Q psy17080 367 WFSVYLVY-YGLVLNLSNIGGDVYL---NT-IISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTL--GFA-P 438 (565)
Q Consensus 367 ~~~~~~~~-~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~--~~~-~ 438 (565)
.......+ +..++..+..+.+... .. ....++.+++.++++++.||+|+|+.+.++.++.++..+.+. ... +
T Consensus 235 ~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~ 314 (491)
T PRK11010 235 KLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDK 314 (491)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 22222222 2223323334444332 22 233457789999999999999998877766655444333221 122 2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHH
Q psy17080 439 GSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVL 516 (565)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i 516 (565)
+.+......++..+..+...+..+++..++.|++.+++..|+.+....+|..+++.+ ...+..++...|.+.++++++
T Consensus 315 ~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~ 394 (491)
T PRK11010 315 NLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVP 394 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 222333334444444555556667888888898889999999999989988766555 445667888888888888888
Q ss_pred HHHHHhhcccC
Q psy17080 517 GGLSVLLLPDT 527 (565)
Q Consensus 517 ~~~~~~~l~et 527 (565)
+.++...++++
T Consensus 395 ~l~~~~~~~~~ 405 (491)
T PRK11010 395 GLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHhc
Confidence 87777766665
No 73
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.93 E-value=1.3e-24 Score=219.48 Aligned_cols=318 Identities=13% Similarity=0.071 Sum_probs=211.3
Q ss_pred cc-ceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHH
Q psy17080 140 GH-TIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP-WFELYLVVRFF 217 (565)
Q Consensus 140 ~~-~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~-~~~~l~~~r~l 217 (565)
.| .+.+++|+ +..+.+++.+++.+++++++++.|+++||+|||++++.+.++.+++.+++++++ +++.+++.|++
T Consensus 24 ~~~~~~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 100 (366)
T TIGR00886 24 AVQMIKDDLGL---STAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLF 100 (366)
T ss_pred hhHHHHHHhCC---CHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 56 38889999 888999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHH----HH---------hcchhHHHH-HHHHHH-H
Q psy17080 218 LGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIA----YY---------SHNWRLLQW-VITIPT-I 282 (565)
Q Consensus 218 ~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~----~~---------~~~Wr~~~~-~~~~~~-~ 282 (565)
+|++.+ ..+....++.|++|+++|+++.++......+|..+++.++ .. ..+||+.++ ..++.. +
T Consensus 101 ~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 179 (366)
T TIGR00886 101 IGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLL 179 (366)
T ss_pred HHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHH
Confidence 999955 4566788999999999999999998865555555554443 22 127999984 434443 3
Q ss_pred HHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHH
Q psy17080 283 FFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFV 362 (565)
Q Consensus 283 ~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 362 (565)
..++...+.+|+|+. +.++.+. +...... ..+++.....++++++|.++...+.
T Consensus 180 ~~~~~~~~~~~~~~~-----~~~~~~~--------~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T TIGR00886 180 PALLIFFVGADTPPG-----KPATGKL--------SFKGARW-------------SVGTGALGDQLKVFRDRHTWILALL 233 (366)
T ss_pred HHHHHHHhcccCCcc-----cccchhc--------ccccccc-------------cccchhHHHHHHHHhccchhhHHHH
Confidence 333444556776531 0000000 0000000 0000001134556777776665555
Q ss_pred HHHHHHHHHHhhhhhhhcc-CcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC
Q psy17080 363 QYIIWFSVYLVYYGLVLNL-SNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP 438 (565)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~ 438 (565)
..+.+..........+.+. +..+.+. .....+..+..+++.++.+++.||+|||+.+..+......+..++.....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 313 (366)
T TIGR00886 234 YSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV 313 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC
Confidence 4444333222222222222 2233332 33344556677888999999999999988777766655555544442222
Q ss_pred ---chHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHH
Q psy17080 439 ---GSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVA 488 (565)
Q Consensus 439 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg 488 (565)
+.+.......+..++.+...+..+....++.| +.++++.|+.+..+++|
T Consensus 314 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 314 SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred CcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 22333344445556666666777888888887 57899999998887765
No 74
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.93 E-value=2.7e-23 Score=208.95 Aligned_cols=310 Identities=13% Similarity=0.077 Sum_probs=219.5
Q ss_pred cccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q psy17080 139 FGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFL 218 (565)
Q Consensus 139 ~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~ 218 (565)
..|.+.+|+++ +..+.+++.+++.+++.+++++.|+++||+|||+++..+.++..++.+.+ .+++++.+++.|++.
T Consensus 22 ~lp~l~~~~~~---s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 97 (355)
T TIGR00896 22 LLPQIRSALGM---SFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALI 97 (355)
T ss_pred cHHHHHHHhCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHH
Confidence 37889999999 88899999999999999999999999999999999999999888888877 778999999999999
Q ss_pred hhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh-----cchhHHHHHHHHHHHHHHHHhhhccc
Q psy17080 219 GFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS-----HNWRLLQWVITIPTIFFLTLWWIMPE 293 (565)
Q Consensus 219 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~-----~~Wr~~~~~~~~~~~~~~~~~~~~pe 293 (565)
|++.+...+....++.|+++ ++|+++.++...+..+|..+++.++..+ .+||+.|.+.++..++... .++||
T Consensus 98 g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~--~~~~~ 174 (355)
T TIGR00896 98 GVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL--AWIPQ 174 (355)
T ss_pred HHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--HHhhh
Confidence 99999888888888889885 6899999999998888888887765543 2399988876655433322 23444
Q ss_pred chhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHh
Q psy17080 294 SPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLV 373 (565)
Q Consensus 294 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 373 (565)
.++ +. +.+++..+...++++|+|.++...+...+........
T Consensus 175 ~~~------~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (355)
T TIGR00896 175 VRR------RV--------------------------------AANQTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSL 216 (355)
T ss_pred hcc------cc--------------------------------CCCCCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHH
Confidence 321 00 0000001123456778887766555444333332222
Q ss_pred hhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhc-CChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q psy17080 374 YYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKM-GRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMV 449 (565)
Q Consensus 374 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~-grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (565)
....+.+.++.+.+. .......+++.+++.++.+++.||+ +||+.+.++..+.+++.+.+. +.+...... ...+
T Consensus 217 ~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~l 294 (355)
T TIGR00896 217 IGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLL-FAPMHGLWA-WALV 294 (355)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHH-HhhhhHHHH-HHHH
Confidence 222233333344333 3445566778889999999999999 566666666666666665555 433332222 3456
Q ss_pred HHHHHHHHHHHHHHhccccc-chhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 450 GKFAISSSNVIIPIYTAELF-PTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 450 ~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.+++.+..++...+...+.. +++.++...++.+..+.++.+++|.+
T Consensus 295 ~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~ 341 (355)
T TIGR00896 295 LGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLF 341 (355)
T ss_pred HHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777777666655444 45677888999998899999999987
No 75
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.92 E-value=1.5e-23 Score=201.20 Aligned_cols=341 Identities=15% Similarity=0.132 Sum_probs=253.0
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchh---HHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWF---ELYLVVRF 216 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~---~~l~~~r~ 216 (565)
.+.|.+||++ ++.|.+++.++..+...+..++.|.+.||||.|++..+++++..+-.+..+++.++ +.+++.++
T Consensus 37 ~~~i~~~~~L---S~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gl 113 (417)
T COG2223 37 GVFIKSDFGL---SEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGL 113 (417)
T ss_pred HhhhccccCC---CHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence 5677799999 99999999999999999999999999999999999999999999999999998554 49999999
Q ss_pred HHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHH----HHHHHHHhc--chhHHHHHHHHHHHHHHHH-hh
Q psy17080 217 FLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIA----ISGIAYYSH--NWRLLQWVITIPTIFFLTL-WW 289 (565)
Q Consensus 217 l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~----~~~l~~~~~--~Wr~~~~~~~~~~~~~~~~-~~ 289 (565)
+.|++ |+.+.+...++++|+||+++|.++++.. ..++|..+ +|.+..... .||....+..++.++..+. ++
T Consensus 114 l~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 114 LLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred HHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 7888999999999999999999999998 55666655 555555543 2999888877776665444 55
Q ss_pred hcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHH
Q psy17080 290 IMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFS 369 (565)
Q Consensus 290 ~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 369 (565)
...|.|...... ++.....++.++++++.|.+.+.+...+..
T Consensus 192 ~~~d~p~~r~~~--------------------------------------~~~~~~~~~~v~~~~~~W~lsllY~~tFG~ 233 (417)
T COG2223 192 GMNDVPEHRASV--------------------------------------KPQLPAQLKAVFSNKDTWLLSLLYFATFGG 233 (417)
T ss_pred HhCCChhhhccc--------------------------------------cccchhHHHHHhcCcchHHHHHHHHHHHHH
Confidence 555554320000 000003456678888888887776655543
Q ss_pred H-HHhhhhhhhccCcCCCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcC------Cc
Q psy17080 370 V-YLVYYGLVLNLSNIGGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFA------PG 439 (565)
Q Consensus 370 ~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~------~~ 439 (565)
. .+..+...+...+++.+.. .......+...+.+.++|+++||+|.++++.+.+..++++..+..... ++
T Consensus 234 Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~ 313 (417)
T COG2223 234 FVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGS 313 (417)
T ss_pred HHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcc
Confidence 2 2223333344444554432 334445556667788999999999999999999988888888777343 22
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhh-hhhHHHHHHHHHHH
Q psy17080 440 SFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSIN-IHFPMGLLGVVGVL 516 (565)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~-~~~~~~~~~~~~~i 516 (565)
.+......+...+..+......+-++..++|. ..|.+.|+...++.+|++.-|.. ...+..+ +...|+++..+.++
T Consensus 314 ~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~ 392 (417)
T COG2223 314 FVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLV 392 (417)
T ss_pred hHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 24444445556677777777788888888886 45888999999999999999988 3334444 67778888888888
Q ss_pred HHHHHhhc
Q psy17080 517 GGLSVLLL 524 (565)
Q Consensus 517 ~~~~~~~l 524 (565)
+.+....+
T Consensus 393 a~v~~~~~ 400 (417)
T COG2223 393 ALVLTWAL 400 (417)
T ss_pred HHHHHHHH
Confidence 77765443
No 76
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.92 E-value=1.2e-22 Score=210.49 Aligned_cols=316 Identities=13% Similarity=0.146 Sum_probs=221.7
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhccccc----ccchh-hHHHHHHHHHHHHHHHHhcch------hH
Q psy17080 141 HTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDK----FGRKK-ALMGSLVFQLVLGVLVAISPW------FE 209 (565)
Q Consensus 141 ~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr----~Grr~-~l~~~~~l~~~~~~~~~~~~~------~~ 209 (565)
+-+.+++++ +...+|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++.+.++ ..
T Consensus 24 ~~~~~~~g~---s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 24 FFYTDVLGL---SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHccCC---CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 334567888 88899999999999999999999999998 68744 677788888888888877654 45
Q ss_pred HHHHHHHHHhhhhhhhHhhhhhhhcccc-ccchhHHHHHHhhhhhHHHHHHHHHHHHH----------hcchhHHHHHHH
Q psy17080 210 LYLVVRFFLGFFCVSIVFSGFVLCMELV-GGKWLTIMGVMYLFPVPVGYIAISGIAYY----------SHNWRLLQWVIT 278 (565)
Q Consensus 210 ~l~~~r~l~G~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~lG~~~~~~l~~~----------~~~Wr~~~~~~~ 278 (565)
.+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|.++++.+... ..+||+.+++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 6777888889988887777788889987 46889999998888888877665443221 137999998888
Q ss_pred HHHHHHHHH-hhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHH
Q psy17080 279 IPTIFFLTL-WWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIR 357 (565)
Q Consensus 279 ~~~~~~~~~-~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 357 (565)
++.++..+. +++++|.++. +.+ +++++.+....+++++++|.++
T Consensus 181 ~l~~~~~~~~~~~~~e~~~~-----~~~------------------------------~~~~~~~~~~~~~~l~~~~~~~ 225 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERYSE-----IPK------------------------------NIEKKLSLKQIFKALFKNDQLL 225 (437)
T ss_pred HHHHHHHHHHHcCCEecCCC-----CCc------------------------------ccccCCCHHHHHHHHhCCHHHH
Confidence 776665544 4566775310 000 0000001122356678888888
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHh
Q psy17080 358 LISFVQYIIWFSVYLVYYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTL 434 (565)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~ 434 (565)
...+..++.+...........++.+....+ ......+..+..+++.++.+++.||+|+|+.+..+..+.+++.+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~ 305 (437)
T TIGR00792 226 ILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFF 305 (437)
T ss_pred HHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 776666655554433222222222221111 22333445677788899999999999999999888887777766665
Q ss_pred hcCC-chHHHHHHHHHHHHHHHHHHHHHHHhcccccc-------hhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 435 GFAP-GSFITISLAMVGKFAISSSNVIIPIYTAELFP-------TKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 435 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
+.+ +.+...+..++.+++.+...+..+++.+|..+ .+.+|.+.|+.+++..+|..++|.+
T Consensus 306 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i 373 (437)
T TIGR00792 306 -FAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFL 373 (437)
T ss_pred -HcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 333 33444555667778888888888888888765 4557899999999999999999887
No 77
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=6.4e-23 Score=237.63 Aligned_cols=312 Identities=17% Similarity=0.126 Sum_probs=222.0
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHH---HhcchhHHHHHHHHHHhhhhhhhHhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLV---AISPWFELYLVVRFFLGFFCVSIVFSG 229 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~ 229 (565)
+....+++.+++.++++++++++|+++||+|||++++.+.++.+++.++. .++++++.++++|+++|++.+...++.
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence 34567999999999999999999999999999999999887666555543 345789999999999999999999999
Q ss_pred hhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc------------chhHHHHHHHH-HHHHHHHHhhhcccchh
Q psy17080 230 FVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH------------NWRLLQWVITI-PTIFFLTLWWIMPESPR 296 (565)
Q Consensus 230 ~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~------------~Wr~~~~~~~~-~~~~~~~~~~~~pesp~ 296 (565)
.+++.|++++++|++++++...+..+|.++++.++.++. +|++.+.+..+ ..++.+++.+++||+|+
T Consensus 125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 999999999999999999999999999999888876542 23444433333 33344444566788765
Q ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhh
Q psy17080 297 WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYG 376 (565)
Q Consensus 297 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (565)
+...+.+. +. ... .......++.+++++.++..++...+.++........
T Consensus 205 ~~~~~~~~-~~---------------~~~--------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (1146)
T PRK08633 205 AAPEVFDK-KK---------------YLF--------------PKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQAN 254 (1146)
T ss_pred CCcccccc-cc---------------ccc--------------HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 31111000 00 000 0001113456777887776666555555443322222
Q ss_pred h-hhccCcCCCc----HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 377 L-VLNLSNIGGD----VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 377 ~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
. .+....++.+ ..+.....+++.+++.++.+++.||+++++.+.++.++.+++.+++. +..+.+..++..++.+
T Consensus 255 ~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 333 (1146)
T PRK08633 255 FPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLP-TAPSLASVLVLFFLFG 333 (1146)
T ss_pred hHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 2 2222223322 23445556677788999999999999998888887777777666665 4444455556667777
Q ss_pred HHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 452 FAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
++.+...+...+++.+..|++.|++++|+.+++..+|.++++.+
T Consensus 334 ~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~ 377 (1146)
T PRK08633 334 FSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLAL 377 (1146)
T ss_pred HHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHH
Confidence 77777778888999999999999999999999999988777766
No 78
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.91 E-value=3e-22 Score=203.27 Aligned_cols=334 Identities=11% Similarity=-0.004 Sum_probs=225.4
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccch----hhHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRK----KALMGSLVFQLVLGVLVAISPWFELYLVVR 215 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr----~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r 215 (565)
.|.+.+|++. +..++|++.+++.++..++++++|+++||+||| +.+.+...+. .......+++++.+++.|
T Consensus 27 l~~~l~~~g~---s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~ 101 (382)
T PRK11128 27 WSVWLKGQGY---TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAI 101 (382)
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHH
Confidence 4567788888 899999999999999999999999999999994 3332222221 223344568899999999
Q ss_pred HHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcc
Q psy17080 216 FFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMP 292 (565)
Q Consensus 216 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~p 292 (565)
++.|++.+...+...+++.++ .++|++..+......++|.+++|.++..+ .+||..|++.++..++..+..++.|
T Consensus 102 ~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 179 (382)
T PRK11128 102 GLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLRP 179 (382)
T ss_pred HHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHccC
Confidence 999999888888888887776 34567777777777788888888888765 4899999887765444444444445
Q ss_pred cchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHH
Q psy17080 293 ESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYL 372 (565)
Q Consensus 293 esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 372 (565)
|.++ +++. +++.++...++++++|+|.++...+..++.......
T Consensus 180 ~~~~----~~~~--------------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~ 223 (382)
T PRK11128 180 TIMP----QGES--------------------------------RQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAA 223 (382)
T ss_pred CCCC----cccc--------------------------------ccccccccchHHHHHcChhHHHHHHHHHHHHHHhHh
Confidence 4321 0000 000001123567889999888776665555444322
Q ss_pred hhhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q psy17080 373 VYYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMV 449 (565)
Q Consensus 373 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (565)
.+...+.+..+.+.+. .....+..+.+++..++.+++.||+++|+.+..+.++.++..+++. ..++.+..++..++
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 302 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMG-STTALPWLIVIQIL 302 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHH
Confidence 2222222333344332 3333455567778888999999999999999888888887766665 55555666666777
Q ss_pred HHHHHHHHHHHHHHhcccccchhhhhhHHHHHH-HHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHH
Q psy17080 450 GKFAISSSNVIIPIYTAELFPTKMRNLGVGASS-VPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGL 519 (565)
Q Consensus 450 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~-~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~ 519 (565)
.+++.+...+....+..+. +++.+++..++.+ ....+|..++|.+ ...+..+. ..+...+++.+++.+
T Consensus 303 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 303 HCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 7888887778778888886 4555688888876 4456677888887 33444454 455555655554443
No 79
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.91 E-value=9.1e-23 Score=209.85 Aligned_cols=349 Identities=15% Similarity=0.084 Sum_probs=211.1
Q ss_pred eeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHH---hcchhH-HHHHHHHHH
Q psy17080 143 IISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVA---ISPWFE-LYLVVRFFL 218 (565)
Q Consensus 143 i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~---~~~~~~-~l~~~r~l~ 218 (565)
+.+++|+ +..+.|++.+++.++..+++++.|+++||+|||++++.+..+.+++..... .++... ......++.
T Consensus 37 l~~~~g~---s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (420)
T PRK09528 37 LHDINGL---SGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVG 113 (420)
T ss_pred HHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455888 888999999999999999999999999999999999887666554433211 111111 011112222
Q ss_pred hhhhhhhHhhhhhhhccccc--cchhHHHHHHhhhhhHHHHHHHHHHHHHh--cchhHHHHHHHHHHHHHHHHhhhc-cc
Q psy17080 219 GFFCVSIVFSGFVLCMELVG--GKWLTIMGVMYLFPVPVGYIAISGIAYYS--HNWRLLQWVITIPTIFFLTLWWIM-PE 293 (565)
Q Consensus 219 G~~~~~~~~~~~~~i~e~~~--~~~r~~~~~~~~~~~~lG~~~~~~l~~~~--~~Wr~~~~~~~~~~~~~~~~~~~~-pe 293 (565)
++..+.........+.++.+ .+++++..+.......+|..+++.++..+ .+|++.|++.++..++.++..+++ +|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 114 GIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred HHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhccccc
Confidence 33222222222223333332 23455566666666677777777666554 389999998887776666555444 33
Q ss_pred chhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHH---
Q psy17080 294 SPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSV--- 370 (565)
Q Consensus 294 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--- 370 (565)
.++....+ ++. ++++++......++.+|+|.++...+.........
T Consensus 194 ~~~~~~~~---~~~----------------------------~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~ 242 (420)
T PRK09528 194 APSTAKVA---NAL----------------------------GANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVF 242 (420)
T ss_pred ccchhhhc---cch----------------------------hcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHH
Confidence 32200000 000 00000001112345667776655444333222211
Q ss_pred --HHhhhhhhhccC-cCCC-cHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHH
Q psy17080 371 --YLVYYGLVLNLS-NIGG-DVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISL 446 (565)
Q Consensus 371 --~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (565)
....|....... ..+. .......+..+..+++.++.+++.||+|+|+.+..+.++.++..+++. +.++.+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~-~~~~~~~~~~~ 321 (420)
T PRK09528 243 DQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSG-FATGPLEVSIL 321 (420)
T ss_pred HHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHH-hcccHHHHHHH
Confidence 111221111111 1111 123344455667788999999999999999998888888887777666 55565655555
Q ss_pred HHHHHHHHHHHHHHHHHhcccccchhhhhhHHHH-HHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHh-
Q psy17080 447 AMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGA-SSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVL- 522 (565)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~-~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~- 522 (565)
.++.+++.+...+....+..|.+|++.|++..+. .++...+|.+++|.+ ...+..++...|.+.+++.++..++.+
T Consensus 322 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 322 KLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 5666666666666677888999999999888765 577788999998888 445667888888888887776665544
Q ss_pred hccc
Q psy17080 523 LLPD 526 (565)
Q Consensus 523 ~l~e 526 (565)
.+++
T Consensus 402 ~~~~ 405 (420)
T PRK09528 402 TLSG 405 (420)
T ss_pred HhcC
Confidence 4443
No 80
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.91 E-value=7.6e-22 Score=201.70 Aligned_cols=344 Identities=10% Similarity=0.028 Sum_probs=229.6
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccc-----cchh-hHHHHHHHHHHHHHHHHhc---chhHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKF-----GRKK-ALMGSLVFQLVLGVLVAIS---PWFEL 210 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~-----Grr~-~l~~~~~l~~~~~~~~~~~---~~~~~ 210 (565)
.|.+.+|-|+ +..++|++..+... .+..+++|+++||+ |||| .++.+.++.+++..+.++. .+++.
T Consensus 22 ~~~~l~~~g~---~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~ 96 (402)
T PRK11902 22 LQAWMTVEGL---DIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWP 96 (402)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHH
Confidence 5666777788 88999999777765 68999999999999 8875 7888888888888887776 35777
Q ss_pred HHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHH
Q psy17080 211 YLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLT 286 (565)
Q Consensus 211 l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~ 286 (565)
+++..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+ .+||..|++.++..++..+
T Consensus 97 l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 97 LAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 888888889888999999999999999999999999999999999999988766553 3899999998887666655
Q ss_pred HhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHH
Q psy17080 287 LWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYII 366 (565)
Q Consensus 287 ~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (565)
..+++||+++.. ++.++.+ ++...++++++|+|.++...+...+.
T Consensus 177 ~~~~~~e~~~~~---~~~~~~~--------------------------------~~~~~~~~~l~~~~~~~~~l~~~~l~ 221 (402)
T PRK11902 177 TTLWAPEPEVPA---RPPRSLG--------------------------------EAVVGPLRDFFSRRGAWALLLLIVLY 221 (402)
T ss_pred HHHhcCCCcccc---cccchhH--------------------------------HHHHHHHHHHHhCcCHHHHHHHHHHH
Confidence 566778765320 0000000 00111356678888877666554444
Q ss_pred HHHHHHhh-hhhhhccCcCCCcHHHHHHH---HH-HHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHh--hcCC-
Q psy17080 367 WFSVYLVY-YGLVLNLSNIGGDVYLNTII---SG-IVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTL--GFAP- 438 (565)
Q Consensus 367 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~--~~~~- 438 (565)
.......+ +...+.....+.+......+ .+ +..+++.++++++.||+|+|+.+..+..+..+..+.+. ...+
T Consensus 222 ~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~ 301 (402)
T PRK11902 222 KLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPK 301 (402)
T ss_pred HhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33222211 22223333344444322222 22 34778899999999999999887776666554443331 1222
Q ss_pred chHHHHHHH----HHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHH
Q psy17080 439 GSFITISLA----MVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGV 512 (565)
Q Consensus 439 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~ 512 (565)
+.+...... +..+++.+........++.+.+|.+.++. .+....++.++++.+ ...+..++...|.+.++
T Consensus 302 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~ 377 (402)
T PRK11902 302 HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYAL----LSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVV 377 (402)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 323333333 23455566667777788888888766544 333334444322223 33577788888888888
Q ss_pred HHHHHHHHHhhcccC
Q psy17080 513 VGVLGGLSVLLLPDT 527 (565)
Q Consensus 513 ~~~i~~~~~~~l~et 527 (565)
+++++.++....+.+
T Consensus 378 ~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 378 IALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHHHHHHHhhh
Confidence 887776666555443
No 81
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.91 E-value=9.6e-23 Score=205.05 Aligned_cols=307 Identities=13% Similarity=0.095 Sum_probs=212.3
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccc-----cchhh-HHHHHHHHHHHHHHHHhc---chhHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKF-----GRKKA-LMGSLVFQLVLGVLVAIS---PWFEL 210 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~-----Grr~~-l~~~~~l~~~~~~~~~~~---~~~~~ 210 (565)
.|.+.+|+++ +..+.|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++..++.++. .+.+.
T Consensus 11 ~~~~~~~~g~---s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~ 85 (356)
T TIGR00901 11 LPYWLRSKNV---SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPL 85 (356)
T ss_pred HHHHHHHcCC---CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence 5778889999 88888988655 455555 89999999998 89987 567777788887777777 46667
Q ss_pred HHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cc--------hhHHHHHHHH
Q psy17080 211 YLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HN--------WRLLQWVITI 279 (565)
Q Consensus 211 l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~--------Wr~~~~~~~~ 279 (565)
+....++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+ .+ ||..|++.++
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai 165 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTAL 165 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHH
Confidence 777888889988888999999999999999999999999999999999998887553 25 9999999888
Q ss_pred HHHHHHHHhh-hcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHH---
Q psy17080 280 PTIFFLTLWW-IMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPL--- 355 (565)
Q Consensus 280 ~~~~~~~~~~-~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--- 355 (565)
..++..+..+ ..||+++. +.+.++.+ + +.+..++++++++.
T Consensus 166 ~~l~~~~~~~~~~~e~~~~---~~~~~~~~----------------------~----------~~~~~~~~~~~~~~~~~ 210 (356)
T TIGR00901 166 LILPGLLVTLFLAKEPQED---ASVPKPLT----------------------Q----------AVLKPIREFFQRKNMIQ 210 (356)
T ss_pred HHHHHHHHHHHhccCCCcc---cccchhHH----------------------H----------HHHHHHHHHHHhcCchH
Confidence 7766665544 35664321 00000000 0 00112344555553
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhccCcCCCcHHHH---HHHHH-HHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHH
Q psy17080 356 IRLISFVQYIIWFSVYLVYYGLVLNLSNIGGDVYLN---TIISG-IVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACL 431 (565)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~ 431 (565)
++...+..++........+...+.+..+.+.+.... ....+ +..+++.++++++.||+|||+.+..+.++.+++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~ 290 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNA 290 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 443333333333333322222333333344443332 22223 45678899999999999999988888877776655
Q ss_pred HHhhcC----------CchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHH
Q psy17080 432 MTLGFA----------PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAG 486 (565)
Q Consensus 432 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ 486 (565)
+..... ++.+......++.+++.+...+...++..|.+|++.|++.+|+.+...+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 291 GFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 444221 2224445555667888888899999999999999999999999877654
No 82
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.91 E-value=1.2e-21 Score=202.51 Aligned_cols=337 Identities=15% Similarity=0.132 Sum_probs=242.3
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc-----chhHHHHHHHHHHhhhhhhhHh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS-----PWFELYLVVRFFLGFFCVSIVF 227 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~ 227 (565)
+...++++..+..+..++.++++|.++||+.||++++.+.++.++..+..++. .+.+.+++.-++.|++.+...|
T Consensus 43 S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~P 122 (524)
T PF05977_consen 43 SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNP 122 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999988877665554432 4788899999999999999999
Q ss_pred hhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCH
Q psy17080 228 SGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRN 304 (565)
Q Consensus 228 ~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~ 304 (565)
+..+++.|.+|+++...+.++.++..++..++||.+++.+ .|-.+.|++.++..++.+......+..++ +++.
T Consensus 123 A~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~----~~~~ 198 (524)
T PF05977_consen 123 AWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP----PSSL 198 (524)
T ss_pred HHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc----cccc
Confidence 9999999999999999999999999999888888888764 35566777766655444443333332110 0000
Q ss_pred HHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhcc-Cc
Q psy17080 305 KEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNL-SN 383 (565)
Q Consensus 305 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 383 (565)
..++. .+.-+..++-+.++|.++..++...+..+.....+-.+++.. +.
T Consensus 199 -~~e~~-----------------------------~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~ 248 (524)
T PF05977_consen 199 -PRERF-----------------------------FSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDV 248 (524)
T ss_pred -chhhh-----------------------------hhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHH
Confidence 00000 000112344455677766655544433333222222233332 23
Q ss_pred CCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHH
Q psy17080 384 IGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVI 460 (565)
Q Consensus 384 ~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (565)
++.+. ++.....+++.++|.++.+++.+|+++++.+..+.++.+++++.+. +.++.+...+..++.|++.......
T Consensus 249 l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~la-l~~~~~~~~~~l~l~G~~~~~~~~~ 327 (524)
T PF05977_consen 249 LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLA-LSPSFWLALIALFLAGAAWIIANSS 327 (524)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34333 3455567788888999989999999988888888888888877777 6677677777778888888888888
Q ss_pred HHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhc
Q psy17080 461 IPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLL 524 (565)
Q Consensus 461 ~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l 524 (565)
..+...+..|.+.||+++++..+....+..++.++ ...+..+....+.+.++..+++.++....
T Consensus 328 ~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 328 LNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999988888777777777 33456677777777776666665555433
No 83
>KOG1330|consensus
Probab=99.91 E-value=3.6e-25 Score=213.75 Aligned_cols=323 Identities=15% Similarity=0.123 Sum_probs=210.4
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.+.+.+.||+ +....|++++.+.+.+++.+|++|+++|||.||+++.+|..++.++.++++++..||++++.|.+.|
T Consensus 56 ~~~v~~~fni---~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vG 132 (493)
T KOG1330|consen 56 LKEVQTYFNI---SDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVG 132 (493)
T ss_pred hHHHHHhcCC---CchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6778888999 7788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHH-hhhcccc
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLTL-WWIMPES 294 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~~-~~~~pes 294 (565)
+|.+...++++++++|.++..+|++++++++.+.++|..+|...+..+ ..|||.|+..++++++..++ .++++|+
T Consensus 133 iGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 133 IGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred cchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 999999999999999999999999999999998888887766555443 45999999999887776655 5667776
Q ss_pred hhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHH--------
Q psy17080 295 PRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYII-------- 366 (565)
Q Consensus 295 p~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------- 366 (565)
+| +..++.. +.++. .........+.+.+.++|.+....+.....
T Consensus 213 ~r-----ga~~~~~-------~~~~~----------------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~s 264 (493)
T KOG1330|consen 213 ER-----GARDEVD-------GENKM----------------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLS 264 (493)
T ss_pred cc-----ccccccc-------cCCcC----------------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccc
Confidence 53 1111100 00000 000001112233334444433333322222
Q ss_pred HHHHHHhhhhhhhccCcCCCc-HHHHHHHHHHHHHHHHHHHHHHHhhcCCh----HHHHHH-------HHHHHHHHHHHh
Q psy17080 367 WFSVYLVYYGLVLNLSNIGGD-VYLNTIISGIVEFPAIVISIFILLKMGRR----RPLCLT-------TLGAGLACLMTL 434 (565)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~dr~grr----~~l~~~-------~~~~~~~~~~~~ 434 (565)
|......|+...+ .....+ ......+...++.+|.++++.++||+.|+ ...... ..+.+...++..
T Consensus 265 ww~p~~~~~~~~~--~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~ 342 (493)
T KOG1330|consen 265 WWAPAFIYYSYEL--IGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFP 342 (493)
T ss_pred hhhhhHHHHHHHH--hCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHH
Confidence 2222233332222 112222 23344556677788899999999984331 111111 111122222222
Q ss_pred hcCCch-HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHH-HHHHHHHHHH
Q psy17080 435 GFAPGS-FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA-GVALILIPYL 495 (565)
Q Consensus 435 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~-~lg~~i~p~i 495 (565)
...... +..+++.+++-.......+...-...|+.|++.|.++.++...+. .+|.+-+|++
T Consensus 343 ~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~i 405 (493)
T KOG1330|consen 343 AFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYI 405 (493)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcce
Confidence 112222 222222333323333334455567788999999999999987665 4566667755
No 84
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.91 E-value=5.7e-22 Score=202.36 Aligned_cols=340 Identities=15% Similarity=0.091 Sum_probs=218.6
Q ss_pred eeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHH---Hhcc-----hhHHHHHHH
Q psy17080 144 ISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLV---AISP-----WFELYLVVR 215 (565)
Q Consensus 144 ~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~---~~~~-----~~~~l~~~r 215 (565)
.+++++ +..+.|++.+++.++..+++++.|+++||+|||+.++.+.+..+++.... .+.+ .+..+++.|
T Consensus 30 ~~~~g~---s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (396)
T TIGR00882 30 HDVNGL---SKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGG 106 (396)
T ss_pred HHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 456788 88899999999999999999999999999999999988776665544322 2222 233456778
Q ss_pred HHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh--cchhHHHHHHHHHHHHHHHHhhh-cc
Q psy17080 216 FFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS--HNWRLLQWVITIPTIFFLTLWWI-MP 292 (565)
Q Consensus 216 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~--~~Wr~~~~~~~~~~~~~~~~~~~-~p 292 (565)
++.|++.+...+....+..|..++ ++...+......++|.++++.++..+ .+||..|++.++..++..+..++ .|
T Consensus 107 ~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 184 (396)
T TIGR00882 107 LYLGFVFSAGAGAIEAYIEKVSRN--SNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMFAKP 184 (396)
T ss_pred HHHHHHhccchhhHHHHHHHhhhh--cccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHhCC
Confidence 888988888888887777665432 33344444455566666666665543 48999999988777666555444 34
Q ss_pred cchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHH
Q psy17080 293 ESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYL 372 (565)
Q Consensus 293 esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 372 (565)
|+|+. ++.++ .. +.++++.+..+.++++|+|.++...+..+........
T Consensus 185 ~~~~~-------~~~~~----~~--------------------~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~ 233 (396)
T TIGR00882 185 KAPSS-------ATVAN----AL--------------------GANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDV 233 (396)
T ss_pred CCchh-------hhhhc----cc--------------------ccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 43321 00000 00 0000111122456788888876555544333322111
Q ss_pred h-----hhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHH
Q psy17080 373 V-----YYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITI 444 (565)
Q Consensus 373 ~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (565)
. .|..... ...+.+ ......+..+.+.++.+..+++.||+|||+.+.++.++.++...+.. ..++.+...
T Consensus 234 ~~~~~~~y~~~~~-~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~-~~~~~~~~~ 311 (396)
T TIGR00882 234 FDQQFANFFTSFF-ATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSS-FATTALEVV 311 (396)
T ss_pred HHHHHHHHHHHhc-cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH-hcCChHHHH
Confidence 1 1111111 111112 23334455667778889999999999999999888887777666655 445555555
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHH-HHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH
Q psy17080 445 SLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGA-SSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSV 521 (565)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~-~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~ 521 (565)
...++.+++..........+..+..|++.++++.+. .+....+|++++|.+ ...+..++..+|.+.+++.++..+..
T Consensus 312 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 312 ILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 555556666555555556677788888888887766 567889999999988 44566788888988888877766654
No 85
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.90 E-value=4.9e-22 Score=229.43 Aligned_cols=311 Identities=13% Similarity=0.010 Sum_probs=220.5
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHH---HHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMG---SLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSG 229 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~---~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 229 (565)
.....++..+++.++++++++++|.++||+|||+++.. ..++.++..+.....+++++++++|+++|++.+...++.
T Consensus 50 ~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~ 129 (1140)
T PRK06814 50 NNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIK 129 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHH
Confidence 34567899999999999999999999999999997543 222333333333445899999999999999999999999
Q ss_pred hhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHHH
Q psy17080 230 FVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNKE 306 (565)
Q Consensus 230 ~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~ 306 (565)
.+++.+++++++|++++++.+++..+|.++++.++.++ .+|++.|+..++..++.+++.+++|+++.- .++...+
T Consensus 130 ~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 207 (1140)
T PRK06814 130 YSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA--APDLKID 207 (1140)
T ss_pred HHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCeec
Confidence 99999999999999999999999999999999998875 489999855656566666666777765420 0000000
Q ss_pred HHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhcc-CcCC
Q psy17080 307 AMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNL-SNIG 385 (565)
Q Consensus 307 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 385 (565)
... .. +....++.+.+++.++...+...+.++.........+.+. ..++
T Consensus 208 -----------------~~~---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g 257 (1140)
T PRK06814 208 -----------------RNI---IR----------STITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLG 257 (1140)
T ss_pred -----------------cch---HH----------HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcC
Confidence 000 00 0011356677888888877776666655433322233332 2334
Q ss_pred Cc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc-------------------CCchHHH
Q psy17080 386 GD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF-------------------APGSFIT 443 (565)
Q Consensus 386 ~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 443 (565)
.+ ........+++.+++.++.+++.++.++++.+..+.++.+++.+.+... ..+.+..
T Consensus 258 ~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (1140)
T PRK06814 258 GDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRI 337 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHH
Confidence 33 2344556677888899999999988776665555555544444333311 0333555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 444 ISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.+..++.+++.+...+...+++.+..|++.||+++|+.+++..+|..+++.+
T Consensus 338 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~ 389 (1140)
T PRK06814 338 LIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTII 389 (1140)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHH
Confidence 5556667777777778889999999999999999999999999999998887
No 86
>PTZ00207 hypothetical protein; Provisional
Probab=99.90 E-value=3.7e-22 Score=206.81 Aligned_cols=401 Identities=11% Similarity=0.067 Sum_probs=258.2
Q ss_pred CCCeEeCCCCcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc---
Q psy17080 129 CLQWTYDSSSFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS--- 205 (565)
Q Consensus 129 C~~~~y~~~~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~--- 205 (565)
|.+..|..+.+.+.+.+++++ +..+.+++.++. ..+.+++++.|+++||+|||++++++.+++++++++++++
T Consensus 39 ~~g~~y~fsv~s~~L~~~lgl---s~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~ 114 (591)
T PTZ00207 39 CTSFMYAFNLISGAMQARYNL---TQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQE 114 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCc---CHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444456656678899999999 888888888774 4455678889999999999999999999999999999997
Q ss_pred ---chhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHH-HHHHh-cchhHHHHHHHHH
Q psy17080 206 ---PWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISG-IAYYS-HNWRLLQWVITIP 280 (565)
Q Consensus 206 ---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~-l~~~~-~~Wr~~~~~~~~~ 280 (565)
++++.+++.|++.|+|.+...+.+...+.+|+| ++||++.++...+..+|.++.+. ...++ .+|+..|++.++.
T Consensus 115 ~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl 193 (591)
T PTZ00207 115 VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSF 193 (591)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 689999999999999999999999999999996 78999999999999999986443 33333 4888888887776
Q ss_pred HHHHHHH-hhh--cccchhHHHhcCCHHHHHHHHHHHHHHc--CCCCc-------------------------------h
Q psy17080 281 TIFFLTL-WWI--MPESPRWLVSMGRNKEAMKILGDAAKFN--SRKLP-------------------------------L 324 (565)
Q Consensus 281 ~~~~~~~-~~~--~pesp~~l~~~~~~~~a~~~l~~~~~~~--~~~~~-------------------------------~ 324 (565)
.++..++ .++ .|++|+|...+++.+++++.+++..+.. +++.| .
T Consensus 194 ~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~ 273 (591)
T PTZ00207 194 ALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGS 273 (591)
T ss_pred HHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccH
Confidence 6554444 333 3566666555544444333322211100 00000 0
Q ss_pred hHH----H-HH---------------------------------HHH---hhhh--------c-cccCcccchhhccccH
Q psy17080 325 NLE----K-LL---------------------------------KES---VLST--------N-QDVGKKVQVMDLWRTP 354 (565)
Q Consensus 325 ~~~----~-~~---------------------------------~~~---~~~~--------~-~~~~~~~~~~~l~~~~ 354 (565)
... - .. +.. ...+ + ...+...++++.+++.
T Consensus 274 ~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~ 353 (591)
T PTZ00207 274 NFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTA 353 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhch
Confidence 000 0 00 000 0000 0 0011123677788888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhccCcC-C--CcH--HH-HHHHHHHHHHHHHHHHHHHHhh---------cCChHHH
Q psy17080 355 LIRLISFVQYIIWFSVYLVYYGLVLNLSNI-G--GDV--YL-NTIISGIVEFPAIVISIFILLK---------MGRRRPL 419 (565)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~--~~-~~~~~~~~~~~~~~~~~~l~dr---------~grr~~l 419 (565)
.+|...+.+++.+..............+.+ + .+. .. ...+.++.+.+|.+..|++... +.|-..+
T Consensus 354 d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l 433 (591)
T PTZ00207 354 RLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIAL 433 (591)
T ss_pred hHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHH
Confidence 888888877776654332222222111112 1 111 11 4567788888999888887621 2222233
Q ss_pred HHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHH-H--H
Q psy17080 420 CLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPY-L--W 496 (565)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~-i--~ 496 (565)
.+..+ +.++.+++....+. ..+.+..++.+++.|..+++....++|+|. +.-|+-.-+..+..-+|+.+..- + .
T Consensus 434 ~~~~~-~~~~~lll~~~~p~-~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~ 510 (591)
T PTZ00207 434 FIPSV-CIITMLTLFLTLPK-AALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGE 510 (591)
T ss_pred HHHHH-HHHHHHHHHHHCCc-cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHH
Confidence 33334 55555555534442 355667788899999999999999999999 77788877777777777666422 2 1
Q ss_pred HHHHh----h---------hhhHHHHHHHHHHHHHHHHhhc-ccCCC-CCccHHHh
Q psy17080 497 HMQSI----N---------IHFPMGLLGVVGVLGGLSVLLL-PDTTG-LADNLHQL 537 (565)
Q Consensus 497 ~~~~~----~---------~~~~~~~~~~~~~i~~~~~~~l-~et~~-~~~~~~~~ 537 (565)
.++.. + +..+|++.+++++++.++...+ -+|++ ..+.++|.
T Consensus 511 ~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~~y~~~~~~~ 566 (591)
T PTZ00207 511 WYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRRLCLKALEER 566 (591)
T ss_pred HHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHHHHHHHHHHH
Confidence 12211 1 4678999999999888876443 45655 33334443
No 87
>KOG2504|consensus
Probab=99.90 E-value=9.9e-23 Score=209.58 Aligned_cols=391 Identities=15% Similarity=0.110 Sum_probs=279.1
Q ss_pred CCeEeCCCCcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhH
Q psy17080 130 LQWTYDSSSFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFE 209 (565)
Q Consensus 130 ~~~~y~~~~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~ 209 (565)
++-.+....+.+.++++|+- +..+++|+.++....+.+.+|+.+.+.||||.|++.+.+.++.+++.++.+|++++|
T Consensus 59 ~g~~~~~Gv~~~~~~~~f~~---s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~ 135 (509)
T KOG2504|consen 59 DGLINSFGLLFEELMDYFGS---SSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLW 135 (509)
T ss_pred hcchheehhhHHHHHHHhCC---CccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 33334444667888999997 777799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHH
Q psy17080 210 LYLVVR-FFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFL 285 (565)
Q Consensus 210 ~l~~~r-~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~ 285 (565)
++++.. ++.|+|.+..+....+.+..|+ +|+|+.+.++...+.++|.++.|.+...+ .|||+.+++.+.+.+-.+
T Consensus 136 ~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~ 214 (509)
T KOG2504|consen 136 QLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVL 214 (509)
T ss_pred HHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 888765 8999999999999999999887 57899999999999999999988777654 499999998777765555
Q ss_pred HHhhhc-ccchhHHHhcCCHHHHHHHHHHHH--------HHcC---CCCch---hHHHHHHHHhhhhccccCcccc----
Q psy17080 286 TLWWIM-PESPRWLVSMGRNKEAMKILGDAA--------KFNS---RKLPL---NLEKLLKESVLSTNQDVGKKVQ---- 346 (565)
Q Consensus 286 ~~~~~~-pesp~~l~~~~~~~~a~~~l~~~~--------~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~---- 346 (565)
+....+ |.+++-. +. .++..+...+.. +... ..... ......++ .+.+......+..
T Consensus 215 ~~~~~~rp~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 290 (509)
T KOG2504|consen 215 VAGALLRPLSPPKK--PN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKR-GPDKWRNSPLQAFLSML 290 (509)
T ss_pred HHHHHcCCCCcCCC--ch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhh-CCccccccchhhhhhhh
Confidence 544333 3222210 00 000000000000 0000 00000 00000000 0001110011112
Q ss_pred hhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcC--ChHHHHH
Q psy17080 347 VMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMG--RRRPLCL 421 (565)
Q Consensus 347 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~g--rr~~l~~ 421 (565)
-.++++++.+....+...+..+.....++.++.+....+.+ ......+.++..++++++.|++.|+.. ++....+
T Consensus 291 d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~ 370 (509)
T KOG2504|consen 291 DLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLL 370 (509)
T ss_pred hHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHH
Confidence 25888998877777766666666555555555554455443 455666788899999999999999987 4455566
Q ss_pred HHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHH
Q psy17080 422 TTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQ 499 (565)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~ 499 (565)
+.++.+++.+... +..+.+..+...++.++..+.........+.|+.+.+.-..+.|+..++..++.+++|.+ ...+
T Consensus 371 ~ll~~gl~~~~~p-~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d 449 (509)
T KOG2504|consen 371 TLLIAGLARLFLP-FATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYD 449 (509)
T ss_pred HHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeee
Confidence 6666677765555 556667777788888888888888888899999999999999999999999999999888 2334
Q ss_pred Hh-hhhhHHHHHHHHHHHHHHHHhhcc-cCCC
Q psy17080 500 SI-NIHFPMGLLGVVGVLGGLSVLLLP-DTTG 529 (565)
Q Consensus 500 ~~-~~~~~~~~~~~~~~i~~~~~~~l~-et~~ 529 (565)
.. +|...|...+++.++++++++..| +.+.
T Consensus 450 ~tg~Y~~~f~~~g~~~~~s~~~~~~~~~~~~~ 481 (509)
T KOG2504|consen 450 ITGNYDHAFYFCGLCFLLSAVLLLILRECLKR 481 (509)
T ss_pred ccCCeeeehhhcChHHHHHHHHHHHhHHHHHh
Confidence 43 378889999999999988887777 4433
No 88
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.90 E-value=1.4e-20 Score=193.64 Aligned_cols=351 Identities=15% Similarity=0.111 Sum_probs=218.0
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.+.|..|.+ +.....|+.+.+.++..++.++.|.++|.||||.+++.+.++..++++.++.++|...++++..+.|
T Consensus 67 l~~I~~diG----~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G 142 (599)
T PF06609_consen 67 LPYINADIG----GSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG 142 (599)
T ss_pred HHHHHHhcC----CCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH
Confidence 345666666 3455688999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccchh
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPESPR 296 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pesp~ 296 (565)
+|.|.... ....++|..|.|+|....++......+....++.++..+ .+|||.|++..+...+.++..++...+|+
T Consensus 143 vgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~ 221 (599)
T PF06609_consen 143 VGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPP 221 (599)
T ss_pred HhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99766654 455689999999998877766655555444556665443 48999999987765555444332222333
Q ss_pred HHHhcCCHHHHHHHHHHHHH----------------Hc--CC-----CCchhHHHHHH------H-HhhhhccccCcccc
Q psy17080 297 WLVSMGRNKEAMKILGDAAK----------------FN--SR-----KLPLNLEKLLK------E-SVLSTNQDVGKKVQ 346 (565)
Q Consensus 297 ~l~~~~~~~~a~~~l~~~~~----------------~~--~~-----~~~~~~~~~~~------~-~~~~~~~~~~~~~~ 346 (565)
+-..+++....++.+++++- .+ +. +...-+..... . ...|.....+.+.-
T Consensus 222 ~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~ 301 (599)
T PF06609_consen 222 RAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLF 301 (599)
T ss_pred hhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcC
Confidence 32233322112222332211 11 11 11111100000 0 01111112223445
Q ss_pred hhhccccHH-HHHHHHHHHHHHHH-HHHhhhhhhhccCcCCC------cHHHHHHHHHHHHHHHHHHHHHHHhhcCC-hH
Q psy17080 347 VMDLWRTPL-IRLISFVQYIIWFS-VYLVYYGLVLNLSNIGG------DVYLNTIISGIVEFPAIVISIFILLKMGR-RR 417 (565)
Q Consensus 347 ~~~l~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~dr~gr-r~ 417 (565)
..++||+++ +...+++.++.... ....++.......-++. .........+++...+.++.+.+..+++| |+
T Consensus 302 P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw 381 (599)
T PF06609_consen 302 PHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKW 381 (599)
T ss_pred CHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhH
Confidence 567888744 32222222221111 11111111111111111 22344455666777888888899988887 44
Q ss_pred HHHHHHHHHHHHHHHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 418 PLCLTTLGAGLACLMTLGFAPGS-FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 418 ~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.++++.+++.+++.++....++. ...+.+.++.+++.+.......+.++-..|++.-+++.|+...+..+|+.++.-+
T Consensus 382 ~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aI 460 (599)
T PF06609_consen 382 QLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAI 460 (599)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHH
Confidence 55566656555544444343333 4445667788888888877788888888999999999999988888887776554
No 89
>KOG2615|consensus
Probab=99.90 E-value=5e-22 Score=186.62 Aligned_cols=320 Identities=17% Similarity=0.128 Sum_probs=200.4
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVL 232 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 232 (565)
+....|.+.|.|+++..+.++.+|.++||+|||+++++|++..++..++.+++.|+..++++|++.|+.. +...+..++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~k-gnl~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFK-GNLSVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-CchHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999977777799999995 456677899
Q ss_pred hccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhcc-----hhHHHHH----HHHHHHH-HHHHhhhcccchhHHHhcC
Q psy17080 233 CMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSHN-----WRLLQWV----ITIPTIF-FLTLWWIMPESPRWLVSMG 302 (565)
Q Consensus 233 i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~~-----Wr~~~~~----~~~~~~~-~~~~~~~~pesp~~l~~~~ 302 (565)
++|+.++|+|++.++...+.+++|.++||.+++++.- =+++|.. ..+.+.. .....+++||+-+ .++
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~---~rk 221 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP---LRK 221 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc---chh
Confidence 9999999999999999999999999999999877532 1111222 2222222 3455678999832 111
Q ss_pred CHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHH-------HHHHHHHHHH-HHHHhh
Q psy17080 303 RNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRL-------ISFVQYIIWF-SVYLVY 374 (565)
Q Consensus 303 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~-~~~~~~ 374 (565)
+.+++.... +.. +.. ++..+.....-..+.|++.... ..+..+.... .....+
T Consensus 222 ~~~~~~~~~-~~~---------------~~~---~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~ 282 (451)
T KOG2615|consen 222 RNDEHSTLQ-EAA---------------DDR---LALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLEN 282 (451)
T ss_pred hcccccchh-hhh---------------hhh---hhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111111000 000 000 0000000000011222222221 1111111111 111122
Q ss_pred hhhhhccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCC-----hHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q psy17080 375 YGLVLNLSNIGGDVYLNTIISGIVEFPAIVISIFILLKMGR-----RRPLCLTTLGAGLACLMTLGFAPGSFITISLAMV 449 (565)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~gr-----r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (565)
+...+....++.+.....-+....++.+.++.+.+..+..| +..+...+.++.-..+++. .............+
T Consensus 283 t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls-~~~~~~~l~~~s~l 361 (451)
T KOG2615|consen 283 TVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLS-LARTPVVLYLGSTL 361 (451)
T ss_pred hHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHh-ccccchhhhHHHHH
Confidence 22222234444433222222223334444455555554443 3344444444444444444 55555555556666
Q ss_pred HHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy17080 450 GKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW 496 (565)
Q Consensus 450 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~ 496 (565)
..+......+....++....|++.||+..|+....+.++-+++|.+.
T Consensus 362 ~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~ 408 (451)
T KOG2615|consen 362 KSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVS 408 (451)
T ss_pred HHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhh
Confidence 66666777788889999999999999999999999999999999984
No 90
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.89 E-value=1.1e-21 Score=193.72 Aligned_cols=344 Identities=11% Similarity=-0.009 Sum_probs=219.9
Q ss_pred ccceeeccccccCcchh-hHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSL-ESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFL 218 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~-~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~ 218 (565)
.|.+.+|+|+ +..+ .|.+.++++.+|+++.++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.
T Consensus 49 ~p~L~~elgl---T~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ll 125 (511)
T TIGR00806 49 TPYLLTVLNF---TEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFY 125 (511)
T ss_pred HHHHHHHcCC---CHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778889999 7777 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh--cchhHHHH---HHHHHHHHHHHHhhhccc
Q psy17080 219 GFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS--HNWRLLQW---VITIPTIFFLTLWWIMPE 293 (565)
Q Consensus 219 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~--~~Wr~~~~---~~~~~~~~~~~~~~~~pe 293 (565)
|++.|+.. +...++..|+|+++|+++.++...+..+|.+++++++..+ .|||+.+. +......+.++..+++|.
T Consensus 126 GvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 126 SVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKR 204 (511)
T ss_pred HHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999 9999999999999999999999999999999988887664 37887544 333344555566788886
Q ss_pred chhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHH-hhhhccccCcccchhhccccHHHHHHHHHHHHHHH-HHH
Q psy17080 294 SPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKES-VLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWF-SVY 371 (565)
Q Consensus 294 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~ 371 (565)
.+|-+.-+++.+.......+. +...+++..+..+.. ......-..-...+++..+++.+....+--.+... ...
T Consensus 205 ~~~sl~f~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~q 280 (511)
T TIGR00806 205 PKRSLFFNRLEDVRGALPCEL----DQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYL 280 (511)
T ss_pred Cchhhhhcccccccccccccc----ccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHH
Confidence 666444443211100000000 000000000000000 00000000011234445556554443332222222 222
Q ss_pred HhhhhhhhccCcCC----CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCh--HHHHHHHHHHHHHHHHHhhcCCchHHHHH
Q psy17080 372 LVYYGLVLNLSNIG----GDVYLNTIISGIVEFPAIVISIFILLKMGRR--RPLCLTTLGAGLACLMTLGFAPGSFITIS 445 (565)
Q Consensus 372 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (565)
..+|...++..-.. .|. ..-.+..+.+.++.+..|++-.++.+- ..+.+..++.+...+++. ...+.|...+
T Consensus 281 v~~Y~Q~LW~~v~~~~~~yNG-~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~-~t~~Iw~~Y~ 358 (511)
T TIGR00806 281 ITYYVHTLWGTLDESLNKYNG-AVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMS-QSHDIWVLYV 358 (511)
T ss_pred HHHHHHHHHHHcCCCccccCC-HHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhh-cccchHHHHH
Confidence 33344333322111 111 122233344555677777775555432 222333333333333444 6666688888
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHH
Q psy17080 446 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIP 493 (565)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p 493 (565)
..++.+.......++...-+++....+.-|..+|+.+++.-+-..+-.
T Consensus 359 ~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT 406 (511)
T TIGR00806 359 TYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIIT 406 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheE
Confidence 888888888888888887777777777778889988877665544433
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.88 E-value=2.1e-20 Score=193.95 Aligned_cols=371 Identities=10% Similarity=0.027 Sum_probs=229.0
Q ss_pred cccccCcchhhHHHHHHHHHHHhhhhhhhhccccc-ccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhh
Q psy17080 147 WDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDK-FGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSI 225 (565)
Q Consensus 147 ~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr-~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 225 (565)
+++ +..+.+++.+.+.++..++++++|+++|| +|||++++++.++.+++.++.+++++++.+++.|++.|++.|..
T Consensus 43 lg~---s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~ 119 (475)
T TIGR00924 43 LGF---SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLF 119 (475)
T ss_pred CCC---CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccc
Confidence 777 78889999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred Hhhhhhhhccccccch---hHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcc----cch
Q psy17080 226 VFSGFVLCMELVGGKW---LTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMP----ESP 295 (565)
Q Consensus 226 ~~~~~~~i~e~~~~~~---r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~p----esp 295 (565)
.+...++++|++++++ |+.+.++...+.++|.++++.++..+ .+||+.|++.++..++.++.+++.+ +.|
T Consensus 120 ~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~ 199 (475)
T TIGR00924 120 KANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIG 199 (475)
T ss_pred cCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCC
Confidence 9999999999998754 88888999999999999999887765 3899999987765544444433332 222
Q ss_pred hHHHhcCCHHHHHHHHHH------------HHHHcCCCCchhHHHH---HHHHhhhhccccCcccchhhccccHHHHHHH
Q psy17080 296 RWLVSMGRNKEAMKILGD------------AAKFNSRKLPLNLEKL---LKESVLSTNQDVGKKVQVMDLWRTPLIRLIS 360 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (565)
+. ..+.+.++.+..... ......+....+.... ............++..+..+..|...+....
T Consensus 200 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 278 (475)
T TIGR00924 200 SV-PDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLF 278 (475)
T ss_pred CC-CCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHH
Confidence 10 000011110000000 0000000000000000 0000000000000001111111111222223
Q ss_pred HHHHHHHHHHHHhhhhhhhccCc--------CCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCC-----hHH--HHHHHHH
Q psy17080 361 FVQYIIWFSVYLVYYGLVLNLSN--------IGGDVYLNTIISGIVEFPAIVISIFILLKMGR-----RRP--LCLTTLG 425 (565)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~gr-----r~~--l~~~~~~ 425 (565)
+...+.|....-.....+++..+ ..........+.++.-++..++..++..|.+| +.. +.+++++
T Consensus 279 ~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l 358 (475)
T TIGR00924 279 LEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLF 358 (475)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence 33333444333222222222111 11123445555666555555554443333333 233 3667777
Q ss_pred HHHHHHHHhhc--------CCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy17080 426 AGLACLMTLGF--------APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH 497 (565)
Q Consensus 426 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~ 497 (565)
.+++++.+... ..+.++.+...++.+++.....|....++.+..|++.||+.+|+......+|..+++.+..
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~ 438 (475)
T TIGR00924 359 CGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLAT 438 (475)
T ss_pred HHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776665421 2244666777888899999999999999999999999999999999999999999888733
Q ss_pred H--HHhhhhhHHHHHHHHHHHHHHHH
Q psy17080 498 M--QSINIHFPMGLLGVVGVLGGLSV 521 (565)
Q Consensus 498 ~--~~~~~~~~~~~~~~~~~i~~~~~ 521 (565)
. ...++...+...++..++.+++.
T Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 439 FGAVPQGVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHhcccchhhHHHHHHHHHHHHHHHH
Confidence 2 33344545566665555555444
No 92
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.88 E-value=1.5e-20 Score=195.12 Aligned_cols=372 Identities=12% Similarity=0.032 Sum_probs=229.1
Q ss_pred eeeccccccCcchhhHHHHHHHHHHHhhhhhhhhccccc-ccchhhHHHHHHHHHHHHHHHHhcchhHH-HHHHHHHHhh
Q psy17080 143 IISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDK-FGRKKALMGSLVFQLVLGVLVAISPWFEL-YLVVRFFLGF 220 (565)
Q Consensus 143 i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr-~Grr~~l~~~~~l~~~~~~~~~~~~~~~~-l~~~r~l~G~ 220 (565)
+.+++++ +....+++.+.+.....+..+++|+++|| +|||++++.+.++++++++.++++.+... ++++|+++|+
T Consensus 41 l~~~lg~---~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~i 117 (489)
T PRK10207 41 FVKQLGF---SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAV 117 (489)
T ss_pred HHHHcCC---CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHh
Confidence 4556888 77778899999998888889999999999 99999999999999999999999876554 5589999999
Q ss_pred hhhhhHhhhhhhhccccccc--hhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccch
Q psy17080 221 FCVSIVFSGFVLCMELVGGK--WLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPESP 295 (565)
Q Consensus 221 ~~~~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pesp 295 (565)
|.|...+...+++.|.+|++ +|+.+.+++..+.++|.++++.++.++ .|||+.|++.++..++.++.+++.++..
T Consensus 118 g~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~ 197 (489)
T PRK10207 118 GNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMV 197 (489)
T ss_pred ccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhh
Confidence 99999999999999999877 457788888999999998888777664 3899999986554333333333333221
Q ss_pred hHHH--hcC-CHHHHHHHHH---------HHHHHcCCCCchhHHHHH----HHH-hhhhccccCcccchhhccccHHHHH
Q psy17080 296 RWLV--SMG-RNKEAMKILG---------DAAKFNSRKLPLNLEKLL----KES-VLSTNQDVGKKVQVMDLWRTPLIRL 358 (565)
Q Consensus 296 ~~l~--~~~-~~~~a~~~l~---------~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (565)
+... .++ +.|.....+. .................. ... -..++.+ ..+++|+|.+..
T Consensus 198 ~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~------~~~~~r~r~~~~ 271 (489)
T PRK10207 198 KDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFK------LDKTGRNKMFVA 271 (489)
T ss_pred cccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc------CCHHHHHHHHHH
Confidence 1000 001 1111110000 000000000000000000 000 0000000 014556555443
Q ss_pred HHHH--HHHHHHHHHHhhhhhhhccCc-C-----C--CcHHHHHHHHHHHHHHHHHHHHHHHhhcCChH-------HHHH
Q psy17080 359 ISFV--QYIIWFSVYLVYYGLVLNLSN-I-----G--GDVYLNTIISGIVEFPAIVISIFILLKMGRRR-------PLCL 421 (565)
Q Consensus 359 ~~~~--~~~~~~~~~~~~~~~~~~~~~-~-----~--~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~-------~l~~ 421 (565)
..+. ..+.|.......+..+++.++ . + ..+.....+..+..++..++.+++.||+++|+ .+.+
T Consensus 272 ~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~ 351 (489)
T PRK10207 272 FVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTL 351 (489)
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHH
Confidence 3322 223333333332333322221 1 1 12233333444555567777889999999886 3666
Q ss_pred HHHHHHHHHHHHh----hcC-----CchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHH
Q psy17080 422 TTLGAGLACLMTL----GFA-----PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILI 492 (565)
Q Consensus 422 ~~~~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~ 492 (565)
++++.+++++.+. ... .+.++.+...++.+++.....+....++.+..|++.++.++|+.++...+|+.++
T Consensus 352 G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg 431 (489)
T PRK10207 352 GMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLG 431 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 7677666654321 011 1225555667788899999999999999999999999999999999888888888
Q ss_pred HHHHHHH------------HhhhhhHHHHHHHHHHHHHHHHhh
Q psy17080 493 PYLWHMQ------------SINIHFPMGLLGVVGVLGGLSVLL 523 (565)
Q Consensus 493 p~i~~~~------------~~~~~~~~~~~~~~~~i~~~~~~~ 523 (565)
..+.... ...+...|...++.+++++++.+.
T Consensus 432 ~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 432 GYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 7663211 112344566666665555554433
No 93
>KOG3764|consensus
Probab=99.88 E-value=5.9e-22 Score=187.28 Aligned_cols=333 Identities=15% Similarity=0.065 Sum_probs=237.0
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVL 232 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 232 (565)
++.++|++..++.+.+.+.+++.|.+.||+|+|..+++++..+.+++++.+|..++++++++|.++|+|.+...++..++
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglam 183 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAM 183 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHH
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccc-hhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHHHHH
Q psy17080 233 CMELVGGK-WLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNKEAM 308 (565)
Q Consensus 233 i~e~~~~~-~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~ 308 (565)
+++.+|.+ +|++++|+...+.++|.+++|.+++.+ .|.+.+|++.++.+++-..+.+++-|.-+
T Consensus 184 lAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~------------ 251 (464)
T KOG3764|consen 184 LADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTE------------ 251 (464)
T ss_pred HHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccc------------
Confidence 99999865 579999999999999999999988765 58999999999998888877666544311
Q ss_pred HHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhc-cCcC---
Q psy17080 309 KILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLN-LSNI--- 384 (565)
Q Consensus 309 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 384 (565)
.++...++..++++++++|..+..............+.-=.++.+ .+++
T Consensus 252 ---------------------------~~~~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p 304 (464)
T KOG3764|consen 252 ---------------------------MDPDSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTP 304 (464)
T ss_pred ---------------------------cCccccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCC
Confidence 000012234467888999887665554444333333322222222 1222
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCChH--HHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHH
Q psy17080 385 GGDVYLNTIISGIVEFPAIVISIFILLKMGRRR--PLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIP 462 (565)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (565)
++..++.++..++...++..+.+.+.||++.-+ ....+++..+.++.... +..+....++..+..+++.+.......
T Consensus 305 ~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP-~~~~~~~L~vp~~~l~~~i~~~dasl~ 383 (464)
T KOG3764|consen 305 GWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIP-FATSIAQLWVPNFGLGFGIGLADASLI 383 (464)
T ss_pred CcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhH-hhhhHHHHhhhhHHHHHHHHHHHHHHh
Confidence 234455666677778889999999999999433 33334444444333333 223322233333333333333322222
Q ss_pred ---Hhcccccchh---hhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhcc
Q psy17080 463 ---IYTAELFPTK---MRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLP 525 (565)
Q Consensus 463 ---~~~~e~~p~~---~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~ 525 (565)
.+..+.-..+ .-|...++......+|.+++|.+ ......++.+...+.++..++.+-++.+++
T Consensus 384 P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 384 PTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred hhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222223 45788888888999999999998 445667888888888888887766554443
No 94
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.87 E-value=7.1e-20 Score=174.74 Aligned_cols=334 Identities=14% Similarity=0.040 Sum_probs=244.4
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHH---hcchhHHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVA---ISPWFELYLVVRF 216 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~---~~~~~~~l~~~r~ 216 (565)
.|.+.+.|++ +..+.++++.+++.|+.+++++.|++.+|+|+|+.++.++.++++++.+.. -..+|..++++-+
T Consensus 36 ip~l~~~f~l---s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lF 112 (422)
T COG0738 36 IPHLKEVFDL---TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALF 112 (422)
T ss_pred HHHHHHHhCc---cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 7889999999 999999999999999999999999999999999999999999999999884 5678999999999
Q ss_pred HHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc----------------------chhHHH
Q psy17080 217 FLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH----------------------NWRLLQ 274 (565)
Q Consensus 217 l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~----------------------~Wr~~~ 274 (565)
+.|.|.+...+.+..++....+++...+.+.+.+...++|.+++|.++..+- .|+++|
T Consensus 113 ila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pY 192 (422)
T COG0738 113 ILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPY 192 (422)
T ss_pred HHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHH
Confidence 9999999999999999999999988888889999999999999988775431 366777
Q ss_pred HHHHHHHHHHHHHhhh--cccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccc
Q psy17080 275 WVITIPTIFFLTLWWI--MPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWR 352 (565)
Q Consensus 275 ~~~~~~~~~~~~~~~~--~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 352 (565)
...+...++..+.... .|+.+. ..++..+.+.....+++|
T Consensus 193 l~~~~~lvll~v~~~~~k~p~~~~--------------------------------------~~~~~~~~~~~~~~~l~~ 234 (422)
T COG0738 193 LILAGLLVLLAVLILLSKLPDLQV--------------------------------------AAPSLGASGSAGLSSLFQ 234 (422)
T ss_pred HHHHHHHHHHHHHHHhccCCcCCc--------------------------------------ccccccccccchHHHHHh
Confidence 7766655554444332 232210 000111111125788999
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhhhhhhccCc-CCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHH
Q psy17080 353 TPLIRLISFVQYIIWFSVYLVYYGLVLNLSN-IGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGL 428 (565)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~ 428 (565)
+|.++...+..++...........+..+..+ .+.+ ........-.+.++|++++.+++.|+...+.+....++..+
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~il 314 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAIL 314 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9999888887776555443333333322222 3322 22333444566788999999999999999998888877776
Q ss_pred HHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhH
Q psy17080 429 ACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFP 506 (565)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~ 506 (565)
.++... +..+ ...+...++.+++++..+|..++...+..| +.. ...|..-.+..+|+.+.|.+ ...+..+....
T Consensus 315 l~~~~~-l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~-~~t-s~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~ 390 (422)
T COG0738 315 LLLAVA-LIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHT-SVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLT 390 (422)
T ss_pred HHHHHH-HhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccc-cccceeeeeheecchHHHHHHHHHHHhhhhHHH
Confidence 666666 5555 344455667788999999999999999999 443 33344445567888888888 44566666655
Q ss_pred HHHHHHHHHHHH
Q psy17080 507 MGLLGVVGVLGG 518 (565)
Q Consensus 507 ~~~~~~~~~i~~ 518 (565)
+.....++.+..
T Consensus 391 ~~~~pllc~lyV 402 (422)
T COG0738 391 FLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHH
Confidence 554555555444
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.86 E-value=6.7e-19 Score=179.33 Aligned_cols=340 Identities=11% Similarity=0.019 Sum_probs=219.3
Q ss_pred ccceeeccccccCcchhhHHH--HHHHHHHHhhhhhhh-hcccccccchhhHHHHHHH-HHHHHHHHH---hcch-hHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLA--EMVFLLGVAFGGFFS-GLVSDKFGRKKALMGSLVF-QLVLGVLVA---ISPW-FELY 211 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~--~s~~~lg~~ig~~~~-G~l~Dr~Grr~~l~~~~~l-~~~~~~~~~---~~~~-~~~l 211 (565)
.|.+.+|.++ +..++|+. .++..+...+.+++. ++.+||+||||..++...+ .++.....+ ...+ ..++
T Consensus 24 lp~~l~~~g~---~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (390)
T TIGR02718 24 LPTLLREDGA---PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWA 100 (390)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHH
Confidence 5677788888 88899997 366678887888888 5589999999987555533 222222222 2222 3344
Q ss_pred HHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHh
Q psy17080 212 LVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLW 288 (565)
Q Consensus 212 ~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~ 288 (565)
+..-++.++..+...+....+..|..++++++...+....+..+|.++++.....+ .+||..|++.++..++..+..
T Consensus 101 ~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~ 180 (390)
T TIGR02718 101 VGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 55566667777778888888889999999889988888888899999988655442 489999999888776655555
Q ss_pred hhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHH
Q psy17080 289 WIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWF 368 (565)
Q Consensus 289 ~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 368 (565)
++++|+++. +.+.+ +++..++++++|+|..+......++...
T Consensus 181 ~~~~~~~~~---~~~~~-----------------------------------~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 222 (390)
T TIGR02718 181 LWLKDRAVA---SPEAP-----------------------------------LARRASLFRFFRRPLAWSLLALALLSAM 222 (390)
T ss_pred HHcCCCCcC---ccccc-----------------------------------hhhHHHHHHHHcCcCHHHHHHHHHHHHH
Confidence 555443210 00000 0011135567788877666655554444
Q ss_pred HHHHhhhhhhhccCcCCCcHHHHHHH---HHH-HHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc-----CCc
Q psy17080 369 SVYLVYYGLVLNLSNIGGDVYLNTII---SGI-VEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF-----APG 439 (565)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~-----~~~ 439 (565)
.....+...+.+..+.+.+......+ .++ ..+++.++.+++.||+|+|+.+..+..+.++..+..... .+.
T Consensus 223 ~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (390)
T TIGR02718 223 TAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPG 302 (390)
T ss_pred HHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCc
Confidence 33333333334444555554433332 232 445678899999999999998887766553332222211 122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccccch-hhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHH
Q psy17080 440 SFITISLAMVGKFAISSSNVIIPIYTAELFPT-KMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVL 516 (565)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i 516 (565)
.........+.++..+...+...+...+..++ +.+++.+++.+....+|..++|.+ ...+..++...|.+.+++.++
T Consensus 303 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~ 382 (390)
T TIGR02718 303 IAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVL 382 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 22223333444555666667777776666665 789999999999999999999998 445666777788877777766
Q ss_pred HHHH
Q psy17080 517 GGLS 520 (565)
Q Consensus 517 ~~~~ 520 (565)
+.+.
T Consensus 383 a~~~ 386 (390)
T TIGR02718 383 AILL 386 (390)
T ss_pred HHHH
Confidence 6544
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.84 E-value=1.2e-18 Score=177.30 Aligned_cols=358 Identities=13% Similarity=0.120 Sum_probs=231.5
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccc----cccchhhHHHH-HHHHHHHHHHHHhcchhH------
Q psy17080 141 HTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSD----KFGRKKALMGS-LVFQLVLGVLVAISPWFE------ 209 (565)
Q Consensus 141 ~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~D----r~Grr~~l~~~-~~l~~~~~~~~~~~~~~~------ 209 (565)
+.+.+++++ +....+++..+..+..++.+++.|.++| |+|||+.++.+ .+...++.++.++++++.
T Consensus 28 ~~yl~~lg~---~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~ 104 (477)
T TIGR01301 28 TPYVQELGI---PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDN 104 (477)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcccc
Confidence 445667888 7888999999999999999999999999 59999988875 666666667777776643
Q ss_pred -----------HHHHHHHHHhhhhhhhHhhhhhhhccccccchh--HHHHHHhhhhhHHHHHHHHHHHHHh---------
Q psy17080 210 -----------LYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWL--TIMGVMYLFPVPVGYIAISGIAYYS--------- 267 (565)
Q Consensus 210 -----------~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r--~~~~~~~~~~~~lG~~~~~~l~~~~--------- 267 (565)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+....+|.++++.+++..
T Consensus 105 ~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~ 184 (477)
T TIGR01301 105 LDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFT 184 (477)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccc
Confidence 223333444557777888889999999998865 5788888888899999988877643
Q ss_pred ---------cchhHHHHHHHHHHHHHHHH-hhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhh
Q psy17080 268 ---------HNWRLLQWVITIPTIFFLTL-WWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLST 337 (565)
Q Consensus 268 ---------~~Wr~~~~~~~~~~~~~~~~-~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (565)
.+.|..|++.++..++..+. .+.++|.|... .++.++. +.+ +
T Consensus 185 ~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~~-----~~~---------------------~ 236 (477)
T TIGR01301 185 KTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFINS-----EAA---------------------P 236 (477)
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchhh-----hcc---------------------c
Confidence 14577888877766555544 56788875311 0000000 000 0
Q ss_pred ccccCcccchhhccc-----cHHHHHHHHHHHHHHHHHHHhh-hhhhh-----ccCcCC-CcH--------HHHHHHHHH
Q psy17080 338 NQDVGKKVQVMDLWR-----TPLIRLISFVQYIIWFSVYLVY-YGLVL-----NLSNIG-GDV--------YLNTIISGI 397 (565)
Q Consensus 338 ~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~-~~~--------~~~~~~~~~ 397 (565)
.++.+....++++++ .|.+++..++.++.|+...... |...+ +-..-. ... .+...+.++
T Consensus 237 ~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~ 316 (477)
T TIGR01301 237 PSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSV 316 (477)
T ss_pred ccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 000000011222222 3567888888888888643322 22221 111110 111 123344555
Q ss_pred HHHHHHHHHHHHHhhcCC-hHHHHHHHHHHHHHHHHHhhcCC--c------------------hHHHHHHHHHHHHHHHH
Q psy17080 398 VEFPAIVISIFILLKMGR-RRPLCLTTLGAGLACLMTLGFAP--G------------------SFITISLAMVGKFAISS 456 (565)
Q Consensus 398 ~~~~~~~~~~~l~dr~gr-r~~l~~~~~~~~~~~~~~~~~~~--~------------------~~~~~~~~~~~~~~~~~ 456 (565)
...+.+++..++.+|+|+ |+...++.++.++++........ + .+..++...+.|+....
T Consensus 317 ~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~ 396 (477)
T TIGR01301 317 VLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAI 396 (477)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHH
Confidence 556666777888999985 66667777777666665541110 0 14455566677888888
Q ss_pred HHHHHHHhcccccchh--hhhhHHHHHHHHHHHHHHHHHHHHH-HH---HhhhhhHHHHHHHHHHHHHHHH-hhcccCCC
Q psy17080 457 SNVIIPIYTAELFPTK--MRNLGVGASSVPAGVALILIPYLWH-MQ---SINIHFPMGLLGVVGVLGGLSV-LLLPDTTG 529 (565)
Q Consensus 457 ~~~~~~~~~~e~~p~~--~r~~~~g~~~~~~~lg~~i~p~i~~-~~---~~~~~~~~~~~~~~~~i~~~~~-~~l~et~~ 529 (565)
.+.+.++++++..|++ ..|..+|+.|++..+.+++..+... .. ..+....+.+.++.+++++++. +.+|+++.
T Consensus 397 ~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 397 TYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 8999999999999954 4589999999998888777665411 11 1234456677777777777765 66787653
No 97
>PRK09669 putative symporter YagG; Provisional
Probab=99.83 E-value=7.4e-18 Score=174.56 Aligned_cols=311 Identities=11% Similarity=0.055 Sum_probs=201.2
Q ss_pred eeccccccCcchhhHHHHHHHHHHHhhhhhhhhccccc----ccch-hhHHHHHHHHHHHHHHHHhcch------hHHHH
Q psy17080 144 ISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDK----FGRK-KALMGSLVFQLVLGVLVAISPW------FELYL 212 (565)
Q Consensus 144 ~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr----~Grr-~~l~~~~~l~~~~~~~~~~~~~------~~~l~ 212 (565)
.+++++ +...+|++.++..+..++..|+.|.++|| +||| +.++.+.+..+++.++....++ +..++
T Consensus 37 t~~~gl---s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~ 113 (444)
T PRK09669 37 TDVFGL---SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYAC 113 (444)
T ss_pred HHhcCC---CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 356788 88999999999999999999999999998 7875 5555677777777665555543 45566
Q ss_pred HHHHHHhhhhhhhHhhhhhhhcccc-ccchhHHHHHHhhhhhHHHHHHHHHHH----HHh------cchhHHHHHHHHHH
Q psy17080 213 VVRFFLGFFCVSIVFSGFVLCMELV-GGKWLTIMGVMYLFPVPVGYIAISGIA----YYS------HNWRLLQWVITIPT 281 (565)
Q Consensus 213 ~~r~l~G~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~lG~~~~~~l~----~~~------~~Wr~~~~~~~~~~ 281 (565)
+..++.+.+.........++..|+. ++++|++..++...+..+|..+++.+. ... .+|+..+.+.++.+
T Consensus 114 ~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~ 193 (444)
T PRK09669 114 VTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLG 193 (444)
T ss_pred HHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 6677777776777777778999998 468899887777777777666654432 222 26787777777665
Q ss_pred HHHHHH-hhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHH
Q psy17080 282 IFFLTL-WWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLIS 360 (565)
Q Consensus 282 ~~~~~~-~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (565)
++..+. ++..+|.++. . ++++.+....++.++|+|.++...
T Consensus 194 ~v~~~~~~~~~~e~~~~----~----------------------------------~~~~~~~~~~~~~~~~n~~~~~l~ 235 (444)
T PRK09669 194 VVLFFCCFFMTKERYTP----E----------------------------------VDNSSSVWKDLKLLLGNSQWRIMF 235 (444)
T ss_pred HHHHHHHhCCeEEecCC----C----------------------------------CcCCCCHHHHHHHHhCCchHHHHH
Confidence 554443 3444543110 0 000011123456778898888776
Q ss_pred HHHHHHHHHHHHhhhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcC
Q psy17080 361 FVQYIIWFSVYLVYYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFA 437 (565)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~ 437 (565)
+..++.+...........++......+. ........+..+++.++.+++.||+|+|+.+..+.++.++..+.+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~ 315 (444)
T PRK09669 236 IFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIP 315 (444)
T ss_pred HHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 6555444433222111122222211111 1222233455667788889999999999998887766554443333232
Q ss_pred Cch-HHHHHHHHHHHHHHHHHHHHHHHhcccccch-------hhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 438 PGS-FITISLAMVGKFAISSSNVIIPIYTAELFPT-------KMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 438 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
+++ +...+..++.+++.+...+..+++.+|..+. +..|...|+.+++..+|..++|.+
T Consensus 316 ~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i 381 (444)
T PRK09669 316 PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAV 381 (444)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 333 4455566778888888888999999988752 234566788888888999888887
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.83 E-value=7.4e-18 Score=169.51 Aligned_cols=350 Identities=15% Similarity=0.184 Sum_probs=235.0
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhccccccc-chhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFG-RKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFL 218 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~G-rr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~ 218 (565)
.+...++-++ +..++|++.++..+...++++++|.++||++ +|+++.+..++.++..+...+.++++.+++..++.
T Consensus 25 ~~~~L~~~G~---s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~ 101 (400)
T PF03825_consen 25 LPLYLESRGF---SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLF 101 (400)
T ss_pred HHHHHHhCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3445566677 8899999999999999999999999999986 57788788888888777778889999988888888
Q ss_pred hhhhhhhHhhhhhhhccccccc--hhHHHHHHhhhhhHHHHHH-HHHHHHHh--cchhHHHHHHHHHHHHHHHHhhhccc
Q psy17080 219 GFFCVSIVFSGFVLCMELVGGK--WLTIMGVMYLFPVPVGYIA-ISGIAYYS--HNWRLLQWVITIPTIFFLTLWWIMPE 293 (565)
Q Consensus 219 G~~~~~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~lG~~~-~~~l~~~~--~~Wr~~~~~~~~~~~~~~~~~~~~pe 293 (565)
.+......|...++..+....+ +-|+.=.+-+.++.++... +..+.... .+....+++.+...++.....+.+|+
T Consensus 102 ~~~~~p~~pl~dsi~~~~~~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~ 181 (400)
T PF03825_consen 102 SFFFSPTMPLSDSIALSYLGDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPK 181 (400)
T ss_pred HHHHccHHHHHHHHHHHHcccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCC
Confidence 8888888888888888777532 2243333334444444332 11122221 12234555555555555555566787
Q ss_pred chhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHh
Q psy17080 294 SPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLV 373 (565)
Q Consensus 294 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 373 (565)
.|+- ++ .++..++....+..+++|+|++...++..++........
T Consensus 182 ~~~~----~~-------------------------------~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~ 226 (400)
T PF03825_consen 182 TPPK----RS-------------------------------AKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAY 226 (400)
T ss_pred Cccc----cc-------------------------------cCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHHHH
Confidence 7520 00 000011111223457899999888777777666666666
Q ss_pred hhhhhhccCcCCC-c---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHH--
Q psy17080 374 YYGLVLNLSNIGG-D---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLA-- 447 (565)
Q Consensus 374 ~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 447 (565)
|.....+.++.++ . ......+..+.|++.....+++.+|+|.|+++.++.+..++=..++....++.+......
T Consensus 227 ~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l 306 (400)
T PF03825_consen 227 YTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLL 306 (400)
T ss_pred HHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 6556666766662 2 233445666789999999999999999999999999998888888773323333333332
Q ss_pred --HHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHH-HHHHHHHHHHH--HHHHHhhhh------hHHHHHHHHHHH
Q psy17080 448 --MVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVP-AGVALILIPYL--WHMQSINIH------FPMGLLGVVGVL 516 (565)
Q Consensus 448 --~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~-~~lg~~i~p~i--~~~~~~~~~------~~~~~~~~~~~i 516 (565)
.+-++.++..+.....|+.+..|++.|+++.|+.+.. ..+|..++.++ ...+..+.. ..+.+.+++.++
T Consensus 307 ~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~ 386 (400)
T PF03825_consen 307 GQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALV 386 (400)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHH
Confidence 3468888888889999999999999999999998765 56888888777 334444433 334445555444
Q ss_pred HHHHH-hhcccC
Q psy17080 517 GGLSV-LLLPDT 527 (565)
Q Consensus 517 ~~~~~-~~l~et 527 (565)
..++. ++.+|+
T Consensus 387 ~~~~f~~~fk~~ 398 (400)
T PF03825_consen 387 ILVLFVILFKPK 398 (400)
T ss_pred HHHHHHhhccCC
Confidence 44433 344443
No 99
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.83 E-value=5e-17 Score=166.61 Aligned_cols=347 Identities=14% Similarity=0.077 Sum_probs=236.3
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHH-HHHHHHHHHHHHHHhc-c-hhHHHHHHHHHHhhhhhhhHhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALM-GSLVFQLVLGVLVAIS-P-WFELYLVVRFFLGFFCVSIVFSG 229 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~-~~~~l~~~~~~~~~~~-~-~~~~l~~~r~l~G~~~~~~~~~~ 229 (565)
.....++..++..+-.++..|+.|.++|+-|+||.++ +..++..+++++..+. + +++...+.-++.-++.+...+..
T Consensus 68 ~~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfy 147 (477)
T PF11700_consen 68 TSSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFY 147 (477)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556788899999999999999999999988776554 4555556677776664 3 45555556666667888888888
Q ss_pred hhhhccccccchh--------------------------HHHHHHhhhhhHHHHHHHHHHHHHh----c-------chhH
Q psy17080 230 FVLCMELVGGKWL--------------------------TIMGVMYLFPVPVGYIAISGIAYYS----H-------NWRL 272 (565)
Q Consensus 230 ~~~i~e~~~~~~r--------------------------~~~~~~~~~~~~lG~~~~~~l~~~~----~-------~Wr~ 272 (565)
.+++.|..+++.+ ++.++.-.....+|.++.-.+.... . +-|.
T Consensus 148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~ 227 (477)
T PF11700_consen 148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRV 227 (477)
T ss_pred HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhH
Confidence 9999999999888 8888877776677776655444332 1 2477
Q ss_pred HHHHHHHHHH-HHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhcc
Q psy17080 273 LQWVITIPTI-FFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLW 351 (565)
Q Consensus 273 ~~~~~~~~~~-~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 351 (565)
.+.+.++.-+ ..+..++++||.|+....+......+...+++ ...++++.
T Consensus 228 ~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l-----------------------------~~t~k~~~ 278 (477)
T PF11700_consen 228 AFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRL-----------------------------WRTFKEIR 278 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHH-----------------------------HHHHHHHH
Confidence 7777666644 44455677888765200011111111111111 11344555
Q ss_pred ccHHHHHHHHHHHHHHHH-HHHhhhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCCh--HHHHHHHHH
Q psy17080 352 RTPLIRLISFVQYIIWFS-VYLVYYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRR--RPLCLTTLG 425 (565)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr--~~l~~~~~~ 425 (565)
|.|.+.+.++..++..-. .........+..+.++.+ .....++..+..++|.++.+++.||+|.| +++..+.++
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLIL 358 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 666666655554433222 223333333333344433 33455566788899999999999999998 777766666
Q ss_pred HHHHHHHHhhc--------CCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH-
Q psy17080 426 AGLACLMTLGF--------APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW- 496 (565)
Q Consensus 426 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~- 496 (565)
..+..+... + ..+.+.+.++.++.+++.+...+..-++.+|+.|++..+..+|+..+.+...++++|++.
T Consensus 359 ~~~i~~~g~-~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g 437 (477)
T PF11700_consen 359 WIIIPLYGL-FGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFG 437 (477)
T ss_pred HHHHHHHHH-HHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 544433333 2 345577888888999999999999999999999999999999999999999999999993
Q ss_pred -HHHHh-hhhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 497 -HMQSI-NIHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 497 -~~~~~-~~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
..+.. +.+..+....++.+++.++...++..|+
T Consensus 438 ~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 438 LITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred HHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhh
Confidence 23333 3667788888888888888888877665
No 100
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.83 E-value=6.1e-18 Score=176.27 Aligned_cols=315 Identities=11% Similarity=0.083 Sum_probs=199.8
Q ss_pred eccccccCcchhhHHHHHHHHHHHhhhhhhhhcccc----cccc-hhhHHHHHHHHHHHHHHHHhcch------hHHHHH
Q psy17080 145 SEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSD----KFGR-KKALMGSLVFQLVLGVLVAISPW------FELYLV 213 (565)
Q Consensus 145 ~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~D----r~Gr-r~~l~~~~~l~~~~~~~~~~~~~------~~~l~~ 213 (565)
+..++ +...+|.+..+..+--++..|+.|.++| |+|| |+.++.+.+..+++.+++...++ +..+++
T Consensus 35 ~v~Gl---s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~ 111 (473)
T PRK10429 35 DVVGL---SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCV 111 (473)
T ss_pred HhcCC---CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHH
Confidence 34577 8889999999999999999999999999 5699 55666777777777666544332 335556
Q ss_pred HHHHHhhhhhhhHhhhhhhhcccc-ccchhHHHHHHhhhhhHHHHHHHHHHHHH----h------cchhHHHHHHHHHHH
Q psy17080 214 VRFFLGFFCVSIVFSGFVLCMELV-GGKWLTIMGVMYLFPVPVGYIAISGIAYY----S------HNWRLLQWVITIPTI 282 (565)
Q Consensus 214 ~r~l~G~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~lG~~~~~~l~~~----~------~~Wr~~~~~~~~~~~ 282 (565)
..++.+++.....+...+++.|+. ++++|.+..++-..+..+|..+.+.+... . .+|+....+.++..+
T Consensus 112 ~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~ 191 (473)
T PRK10429 112 TYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFI 191 (473)
T ss_pred HHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 667778888888888889999999 58999998888666666665554433221 1 146666666555544
Q ss_pred HHHHH-hhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHH
Q psy17080 283 FFLTL-WWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISF 361 (565)
Q Consensus 283 ~~~~~-~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 361 (565)
+..+. ++..+|.+.. .. + ..+++++.+.+..++.+++||.++..+.
T Consensus 192 ~~~~~~~~~~~e~~~~----~~--~---------------------------~~~~~~~~~~~~~~~~~~~n~~~~~ll~ 238 (473)
T PRK10429 192 VSTIITLRNVHEVYSS----DN--Q---------------------------VSAEGSHLTLKDIVALIYKNDQLSCLLG 238 (473)
T ss_pred HHHHHHHcCceecCCc----cc--c---------------------------ccccccCCCHHHHHHHHhcCHHHHHHHH
Confidence 43333 3445664210 00 0 0000000111223455678888877766
Q ss_pred HHHHHHHHHHHhhhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhh---
Q psy17080 362 VQYIIWFSVYLVYYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLG--- 435 (565)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~--- 435 (565)
..++.+...........++......+. .....+.++..+++.++.+++.||+|+|+.+.++..+..++.+.+..
T Consensus 239 ~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~ 318 (473)
T PRK10429 239 MALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGL 318 (473)
T ss_pred HHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666555443332222222322222222 22333445677888899999999999999988777765555444331
Q ss_pred cCCc-hHHHHHHHHHHHHHHHHHHHHHHHhcccccc-----h--hhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 436 FAPG-SFITISLAMVGKFAISSSNVIIPIYTAELFP-----T--KMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 436 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-----~--~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
..++ .+...+..++.+++.+...+..+++.+|..+ + +..|..+|+.+++..+|..+++.+
T Consensus 319 ~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i 386 (473)
T PRK10429 319 AAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFF 386 (473)
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 1222 2444455566777888888888888999855 2 224557788888888988888877
No 101
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.82 E-value=3.5e-20 Score=197.65 Aligned_cols=274 Identities=13% Similarity=0.070 Sum_probs=188.3
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc-------------
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP------------- 206 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~------------- 206 (565)
.+++.++|++ ++.+.|++.+.+.++++++.++.|+++||+|||+.+.++.++++++++++++.+
T Consensus 56 l~~iek~F~l---ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 56 LTTIERRFKL---STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred chhhhhhhCC---CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 6889999999 888899999999999999999999999999999999999999999999988753
Q ss_pred --------------------------------------hhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHH
Q psy17080 207 --------------------------------------WFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVM 248 (565)
Q Consensus 207 --------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~ 248 (565)
.+..++++|+++|+|.+..++...+++.|++|+++|+++.++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 245678999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhc-------------------------chhHHHHHHHHHHHHHHHHhhhcccc-hhHHHhcC
Q psy17080 249 YLFPVPVGYIAISGIAYYSH-------------------------NWRLLQWVITIPTIFFLTLWWIMPES-PRWLVSMG 302 (565)
Q Consensus 249 ~~~~~~lG~~~~~~l~~~~~-------------------------~Wr~~~~~~~~~~~~~~~~~~~~pes-p~~l~~~~ 302 (565)
+..+..+|+++++.++..+. .||..|++.+++.++..+.++++|+. |+.. .+.
T Consensus 213 ~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~-~~~ 291 (633)
T TIGR00805 213 LESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEG-KRV 291 (633)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcc-ccc
Confidence 99999999999888775431 26667888777777666666667764 2210 000
Q ss_pred CHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhcc-
Q psy17080 303 RNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNL- 381 (565)
Q Consensus 303 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 381 (565)
+.++.++. .. +....+...+ .....++....++.++++|.++...+..++............+.++
T Consensus 292 ~~~~~~~~--~~-~~~~~~~~~~----------~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~ 358 (633)
T TIGR00805 292 NVDVHETE--KL-EKSEDKSRKK----------NSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLE 358 (633)
T ss_pred chhhhhhh--cc-cccccccchh----------hhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000 00 0000000000 0000001123467789999988887777666655444333333333
Q ss_pred CcCCCcHHHHHHHHH---H-HHHHHHHHHHHHHhhcCC--hHHHHHHHHHHHHHH
Q psy17080 382 SNIGGDVYLNTIISG---I-VEFPAIVISIFILLKMGR--RRPLCLTTLGAGLAC 430 (565)
Q Consensus 382 ~~~~~~~~~~~~~~~---~-~~~~~~~~~~~l~dr~gr--r~~l~~~~~~~~~~~ 430 (565)
..++.+......+.+ + +.+++.+++|+++||+++ |+.+.+++++..++.
T Consensus 359 ~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~ 413 (633)
T TIGR00805 359 NQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSY 413 (633)
T ss_pred HHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHH
Confidence 345555444333332 2 346788999999999984 455555555555443
No 102
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.82 E-value=1.2e-17 Score=174.51 Aligned_cols=368 Identities=10% Similarity=-0.009 Sum_probs=212.5
Q ss_pred eeeccccccCcchhhHHHHHHHHHHHhhhhhhhhccccc-ccchhhHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHhh
Q psy17080 143 IISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDK-FGRKKALMGSLVFQLVLGVLVAISP-WFELYLVVRFFLGF 220 (565)
Q Consensus 143 i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr-~Grr~~l~~~~~l~~~~~~~~~~~~-~~~~l~~~r~l~G~ 220 (565)
+.+++|+ +....+++.+.+........+++|+++|| +|||++++.+.++.+++.+++++++ +.+.+++.|++.|+
T Consensus 48 l~~~lg~---s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gi 124 (500)
T PRK09584 48 LVKQLGM---SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAV 124 (500)
T ss_pred HHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 3467888 66667777777776666667789999999 5999999999999999999998874 56677788999999
Q ss_pred hhhhhHhhhhhhhccccccch--hHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHh----hhc
Q psy17080 221 FCVSIVFSGFVLCMELVGGKW--LTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLW----WIM 291 (565)
Q Consensus 221 ~~~~~~~~~~~~i~e~~~~~~--r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~----~~~ 291 (565)
+.|...+...+++.|++|+++ |+.+.+++..+.++|..++|.++.++ .|||+.|++.++..++.++.+ ..+
T Consensus 125 g~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~ 204 (500)
T PRK09584 125 GNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWV 204 (500)
T ss_pred hhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHh
Confidence 999888988999999998643 45577888889999999998887765 489999998775444433222 223
Q ss_pred ccchhHHHhcCCHHHHHHHH-----------HHHHHHcCCCCchhHHHHHHHH--hhhhccccCcccchhhccccHHHHH
Q psy17080 292 PESPRWLVSMGRNKEAMKIL-----------GDAAKFNSRKLPLNLEKLLKES--VLSTNQDVGKKVQVMDLWRTPLIRL 358 (565)
Q Consensus 292 pesp~~l~~~~~~~~a~~~l-----------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (565)
+|.++- ..+.+.+.....+ ......+. +............ ....... ....+.-|+|.+..
T Consensus 205 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 278 (500)
T PRK09584 205 KQYGSK-PDFEPINYRKLLLTIVGVVALIAIATWLLHNQ-EIARMALGVVALGIVVIFGKEA----FAMKGAARRKMIVA 278 (500)
T ss_pred ccCCCC-CCccccchhhHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHH----hhcCHHHHHHHHHH
Confidence 332110 0000111110000 00000000 0000000000000 0000000 00001111222111
Q ss_pred HHHHHHHHHHHHHHhhhhhhhc--------cC-c-CC--CcHHHHHHHHHHHHHHHHHHHHHH----HhhcCChHHHHHH
Q psy17080 359 ISFVQYIIWFSVYLVYYGLVLN--------LS-N-IG--GDVYLNTIISGIVEFPAIVISIFI----LLKMGRRRPLCLT 422 (565)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~--------~~-~-~~--~~~~~~~~~~~~~~~~~~~~~~~l----~dr~grr~~l~~~ 422 (565)
.. .++........|...+.. .+ . .+ ........+.++..++..++..++ .+|.+.++.+.++
T Consensus 279 ~~--~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G 356 (500)
T PRK09584 279 FI--LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIG 356 (500)
T ss_pred HH--HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHH
Confidence 11 111111111122111111 10 1 11 123344445555555555555444 4444455677888
Q ss_pred HHHHHHHHHHHhhcCC--------chHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHH
Q psy17080 423 TLGAGLACLMTLGFAP--------GSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPY 494 (565)
Q Consensus 423 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~ 494 (565)
+++.+++++.+..... +.++.+...++.+++.....|....++.+..|++.||.++|+..+...+|+.++..
T Consensus 357 ~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~ 436 (500)
T PRK09584 357 MVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGY 436 (500)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888777652211 12456666778889999999999999999999999999999887777777666655
Q ss_pred HHHH------------HHhhhhhHHHHHHHHHHHHHHHH
Q psy17080 495 LWHM------------QSINIHFPMGLLGVVGVLGGLSV 521 (565)
Q Consensus 495 i~~~------------~~~~~~~~~~~~~~~~~i~~~~~ 521 (565)
+... ...++...|...++.+++.+++.
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~ 475 (500)
T PRK09584 437 VANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLM 475 (500)
T ss_pred HHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 5211 01124566666666655444433
No 103
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.79 E-value=1.4e-16 Score=149.97 Aligned_cols=333 Identities=16% Similarity=0.151 Sum_probs=245.3
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.+.|.+|+++ +....|+++++..+...+.+++..+++.|+|.++.+..++++.+++.++-... +.+.++.+-.+.|
T Consensus 35 L~~Ir~~~gl---s~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G 110 (395)
T COG2807 35 LDEIRQDLGL---SFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAG 110 (395)
T ss_pred HHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHH
Confidence 6788999999 89999999999999999999999999999999999999999999999998887 7888999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHH----hcchhHHHHHHHHHHHHHHHHhhhcccch
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY----SHNWRLLQWVITIPTIFFLTLWWIMPESP 295 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~----~~~Wr~~~~~~~~~~~~~~~~~~~~pesp 295 (565)
.|.+...+..+.++.+.+| |+-+..++++.+...+|..+++.++.. ..+||....+.++++++.++.|+. ...
T Consensus 111 ~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlP--q~~ 187 (395)
T COG2807 111 AGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLP--QAL 187 (395)
T ss_pred hhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhh--hcc
Confidence 9999999999999999996 456888888888888877776655543 358999999999999888887752 211
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYY 375 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (565)
| .+ ....+.+..+-..++|+|.-|...+.+.+..+..+...-
T Consensus 188 r-----~~---------------------------------~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~ 229 (395)
T COG2807 188 R-----EQ---------------------------------AASIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIG 229 (395)
T ss_pred c-----cc---------------------------------ccccccccccccccccCchhHHHHHHHHhhHHHHHHHHH
Confidence 1 00 001111222345589999988888877766666555555
Q ss_pred hhhhccCcCCCcHH---HHHHHHHHHHHHHHHHHHHHHhhc-CChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 376 GLVLNLSNIGGDVY---LNTIISGIVEFPAIVISIFILLKM-GRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 376 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~-grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
.++-...+.+.+.. ....+..+++++..+....+.+|. .+|+..+....++.++.+.+. +.|....... +++.|
T Consensus 230 WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~-~~P~~~~~lw-~~llG 307 (395)
T COG2807 230 WLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLL-LAPGQLPILW-ALLLG 307 (395)
T ss_pred HHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-HhhhhHHHHH-HHHHh
Confidence 55555555555543 444566678888999999999975 456666666666666666665 4454422222 57788
Q ss_pred HHHHHHHHHHHHhcccccch-hhhhhHHHHHHHHHHHHHHHHHHHH--HHHHh-hhhhHHHHHHHHHHHHHH
Q psy17080 452 FAISSSNVIIPIYTAELFPT-KMRNLGVGASSVPAGVALILIPYLW--HMQSI-NIHFPMGLLGVVGVLGGL 519 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~-~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~-~~~~~~~~~~~~~~i~~~ 519 (565)
++.+..++...+++....+. +..+.-.|+.+.++++-..++|++. ..|.. ++..++..+....++..+
T Consensus 308 ~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i 379 (395)
T COG2807 308 LGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLI 379 (395)
T ss_pred CccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 89999999988887776654 3456667788888888888999983 33433 455555555554444333
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.79 E-value=2.3e-17 Score=170.86 Aligned_cols=363 Identities=13% Similarity=0.004 Sum_probs=226.3
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhccccccc-----chhhHHHHHHHHH-HHHHHHHhcchhHHH-H
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFG-----RKKALMGSLVFQL-VLGVLVAISPWFELY-L 212 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~G-----rr~~l~~~~~l~~-~~~~~~~~~~~~~~l-~ 212 (565)
.+-+.+++++ +..+++...+...+...+-.+ +|+++||++ ||+.++++.++.+ ++....+..++.... .
T Consensus 49 ~~~l~~~lg~---s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~ 124 (468)
T TIGR00788 49 SPMLTDDLGL---DGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAA 124 (468)
T ss_pred hHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHH
Confidence 4555667899 888898999999999999776 999999998 7777787777663 443444444554444 4
Q ss_pred HHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhh---hHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHH
Q psy17080 213 VVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFP---VPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLT 286 (565)
Q Consensus 213 ~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~---~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~ 286 (565)
+.+++.+++.+...++.-++..|..+ +++....+..... ..+|.++++.+++.+ .+||..|++.++..++..+
T Consensus 125 ~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 125 AFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF 203 (468)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 48899999999999999999999998 5554433333332 346777777666553 3799999998877766666
Q ss_pred HhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHH
Q psy17080 287 LWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYII 366 (565)
Q Consensus 287 ~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (565)
..+++||++.....+.+.++ ...... ..... .. . .++...+.++.+++|.+++.++..++.
T Consensus 204 ~~~~~~E~~~~~~~~~~~~~-~~~~~~--------~~~~~---~~-~------~~~~~~~l~~~l~~~~i~~~l~fifl~ 264 (468)
T TIGR00788 204 VSNLSKERRAFVRPRIGTYL-EMNMAL--------LTLGV---LA-N------VKVQILGLRGAIQLLEIAKPLIFIFLS 264 (468)
T ss_pred HHHhcccccccccccccccc-hhhhhh--------hhhhH---HH-H------HHHHHHHHHHHHhcHHHHHHHHHHHHH
Confidence 66778886310000000000 000000 00000 00 0 000011244456777777655544441
Q ss_pred HH-HHHHhhhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcC-----
Q psy17080 367 WF-SVYLVYYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFA----- 437 (565)
Q Consensus 367 ~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~----- 437 (565)
+. ..........+.....+.+ .+......+++++++..+.+++.+|++.|+.+.++.++.+++.+......
T Consensus 265 ~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~ 344 (468)
T TIGR00788 265 YANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNL 344 (468)
T ss_pred HhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeecccc
Confidence 11 1111111111112233333 34555667788889999999999999999999998888887765432111
Q ss_pred ----CchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhh-----hhhH
Q psy17080 438 ----PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSIN-----IHFP 506 (565)
Q Consensus 438 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~-----~~~~ 506 (565)
++.+......++.+++.+..+.....++.+..|++.+++..++.+.+.++|..+++.+ ...+..+ +...
T Consensus 345 ~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~ 424 (468)
T TIGR00788 345 AFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNL 424 (468)
T ss_pred ccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccch
Confidence 2223334445666777777788889999999999999999999999999999999976 2233334 4433
Q ss_pred HHHHHH---HHHHHHHHHhhccc
Q psy17080 507 MGLLGV---VGVLGGLSVLLLPD 526 (565)
Q Consensus 507 ~~~~~~---~~~i~~~~~~~l~e 526 (565)
+.+..+ ..++...+..++|+
T Consensus 425 ~~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 425 WLLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC
Confidence 433333 33333444456776
No 105
>PRK09848 glucuronide transporter; Provisional
Probab=99.79 E-value=2.1e-16 Score=163.96 Aligned_cols=310 Identities=10% Similarity=0.103 Sum_probs=191.6
Q ss_pred eeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccc----cchhhH-HHHHHHHHHHHHHHH-h----cc--hhHH
Q psy17080 143 IISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKF----GRKKAL-MGSLVFQLVLGVLVA-I----SP--WFEL 210 (565)
Q Consensus 143 i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~----Grr~~l-~~~~~l~~~~~~~~~-~----~~--~~~~ 210 (565)
+.+.+++ +..++|++.+...+..++..++.|.++||. |||+.. +.+.+...+..++.. . ++ ....
T Consensus 35 ~~~~~gl---~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (448)
T PRK09848 35 YTDVAGV---GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVY 111 (448)
T ss_pred HHHHcCC---CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHH
Confidence 3445677 888999999999999999999999999996 777654 555554544444432 1 11 1233
Q ss_pred HHHHHHHHhhhhhhhHhhhhhhhcccccc-chhHHHHHHhhhhhH-----HHHHHHHHHHHHhc-----chhHHHHHHHH
Q psy17080 211 YLVVRFFLGFFCVSIVFSGFVLCMELVGG-KWLTIMGVMYLFPVP-----VGYIAISGIAYYSH-----NWRLLQWVITI 279 (565)
Q Consensus 211 l~~~r~l~G~~~~~~~~~~~~~i~e~~~~-~~r~~~~~~~~~~~~-----lG~~~~~~l~~~~~-----~Wr~~~~~~~~ 279 (565)
+++..++.+++.+...+...++..|..++ ++|.+..++-..+.+ +|..++|.++.... +|.....+.++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v 191 (448)
T PRK09848 112 AYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAI 191 (448)
T ss_pred HHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 44556677888777777777777777654 678877666554433 44445555554432 12211222222
Q ss_pred HHHHHH-HHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHH
Q psy17080 280 PTIFFL-TLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRL 358 (565)
Q Consensus 280 ~~~~~~-~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 358 (565)
.+++.. +.....||++.. +.++......++.++|+|.++.
T Consensus 192 ~~~~~~~~~~~~~~e~~~~---------------------------------------~~~~~~~~~~~~~l~~n~~f~~ 232 (448)
T PRK09848 192 AGMVLYFICFKSTRENVVR---------------------------------------IVAQPSLKISLQTLKRNRPLFM 232 (448)
T ss_pred HHHHHHHHHHcCcEeccCC---------------------------------------CccCCCHHHHHHHHhCCchHHH
Confidence 222222 223334554210 0000011223567889999887
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccCc-CCCcHHHH--HHH-HHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHh
Q psy17080 359 ISFVQYIIWFSVYLVYYGLVLNLSN-IGGDVYLN--TII-SGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTL 434 (565)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~-~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~ 434 (565)
..+..++.+..........+++.+. ++.+.... ... ..+..+++.++.+++.||+|+|+.+.++.++.+++.+.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~ 312 (448)
T PRK09848 233 LCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFF 312 (448)
T ss_pred HHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 7776666555444333333333332 23222211 112 2345667788899999999999999999888777776665
Q ss_pred hcCC-ch-HHHHHHHHHHHHHHHHHHHHHHHhcccccchh-------hhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 435 GFAP-GS-FITISLAMVGKFAISSSNVIIPIYTAELFPTK-------MRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 435 ~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
+.+ .. +...+..++.+++.+...+...+..+|..|.+ .+|...|+.++...+|..+++.+
T Consensus 313 -~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i 381 (448)
T PRK09848 313 -WVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSI 381 (448)
T ss_pred -HcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 333 22 44444456677888888888888888887654 35888899999999999998877
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.78 E-value=3.8e-17 Score=168.40 Aligned_cols=312 Identities=15% Similarity=0.177 Sum_probs=223.5
Q ss_pred eccccccCcchhhHHHHHHHHHHHhhhhhhhhcccc----cccchh-hHHHHHHHHHHHHHHHHhc-c-------hhHHH
Q psy17080 145 SEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSD----KFGRKK-ALMGSLVFQLVLGVLVAIS-P-------WFELY 211 (565)
Q Consensus 145 ~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~D----r~Grr~-~l~~~~~l~~~~~~~~~~~-~-------~~~~l 211 (565)
+..++ +....|++..+..+-.++..|+.|.++| |+|||| .++.+.++.+++.+++... + ...++
T Consensus 30 ~~~gl---~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~ 106 (428)
T PF13347_consen 30 DVLGL---SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWL 106 (428)
T ss_pred HHcCC---CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHH
Confidence 44577 7888999999999999999999999999 799766 4556778888887777765 4 23345
Q ss_pred HHHHHHHhhhhhhhHhhhhhhhccccc-cchhHHHHHHhhhhhHHHHHHHHHHHHH----hc------chhHHHHHHHHH
Q psy17080 212 LVVRFFLGFFCVSIVFSGFVLCMELVG-GKWLTIMGVMYLFPVPVGYIAISGIAYY----SH------NWRLLQWVITIP 280 (565)
Q Consensus 212 ~~~r~l~G~~~~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~lG~~~~~~l~~~----~~------~Wr~~~~~~~~~ 280 (565)
.+..++..++.........++..|..+ +++|.+..+.-..+..+|.++.+.+... .. +|++..++.+++
T Consensus 107 ~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv 186 (428)
T PF13347_consen 107 FVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIV 186 (428)
T ss_pred HHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHH
Confidence 777777788888888888999999998 5789999999888888888654433322 21 689988888777
Q ss_pred HHHHHHH-hhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHH
Q psy17080 281 TIFFLTL-WWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLI 359 (565)
Q Consensus 281 ~~~~~~~-~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 359 (565)
.++..+. .+..+|.++ +.++++++.+-+..+++++++|.++..
T Consensus 187 ~~v~~~i~~~~~ke~~~------------------------------------~~~~~~~~~~~~~~~~~~~~nr~~~~l 230 (428)
T PF13347_consen 187 GLVFFLITFFFVKERSV------------------------------------EVTEQEKKISLRDSLRSLFRNRPFRIL 230 (428)
T ss_pred HHHHhhhhhheeeeccc------------------------------------cccccccccccccchhhhcccchHHHH
Confidence 6665554 455666210 000111122234457888999998888
Q ss_pred HHHHHHHHHHHHHhhhhhhhccCc-CC--CcHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc
Q psy17080 360 SFVQYIIWFSVYLVYYGLVLNLSN-IG--GDVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF 436 (565)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~ 436 (565)
....++.++..........++.+. .+ ........+..+..+++.++.+++.||+|+|+.+..+.++.+++.+++...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~ 310 (428)
T PF13347_consen 231 LLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFL 310 (428)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHH
Confidence 877776665443322112221111 11 122333445567778889999999999999999999999998888877733
Q ss_pred C-CchHHHHHHHHHHHHHHHHHHHHHHHhcccccchh-------hhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 437 A-PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTK-------MRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 437 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
. .+.+...+..++.+++.+..+...+++.+|+.+.+ ..|...|+.++...++..+++.+
T Consensus 311 ~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i 377 (428)
T PF13347_consen 311 GPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAI 377 (428)
T ss_pred HhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHH
Confidence 3 35577777788889999998899999999988743 34777888888888888888776
No 107
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.75 E-value=9.9e-16 Score=152.54 Aligned_cols=314 Identities=14% Similarity=0.147 Sum_probs=218.0
Q ss_pred eccccccCcchhhHHHHHHHHHHHhhhhhhhhccccc----ccch-hhHHHHHHHHHHHHHHHHhcch------hHHHHH
Q psy17080 145 SEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDK----FGRK-KALMGSLVFQLVLGVLVAISPW------FELYLV 213 (565)
Q Consensus 145 ~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr----~Grr-~~l~~~~~l~~~~~~~~~~~~~------~~~l~~ 213 (565)
+.+++ +...+|.+..+--+--++.-|+.|.++|| +||+ +-++.+.+..++.+.++-.+++ ....++
T Consensus 41 dv~Gi---s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 41 DVFGL---SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV 117 (467)
T ss_pred cccCC---cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence 34677 77888888888888888999999999995 8875 4566677888888888887764 445667
Q ss_pred HHHHHhhhhhhhHhhhhhhhccccc-cchhHHHHHHhhhhhHHHHHHHHHHHH----Hh------cchhHHHHHHHHHHH
Q psy17080 214 VRFFLGFFCVSIVFSGFVLCMELVG-GKWLTIMGVMYLFPVPVGYIAISGIAY----YS------HNWRLLQWVITIPTI 282 (565)
Q Consensus 214 ~r~l~G~~~~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~lG~~~~~~l~~----~~------~~Wr~~~~~~~~~~~ 282 (565)
.-.+.+++.......-.++..|+.+ ++||.+..++-+.+..+|.++...+.. .+ .+|+....+.++.++
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~ 197 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV 197 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 7889999999888888899999986 789999999999988888766443332 21 267777777777766
Q ss_pred HHHHHh-hhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHH
Q psy17080 283 FFLTLW-WIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISF 361 (565)
Q Consensus 283 ~~~~~~-~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 361 (565)
+..+.. +-+.|.+. ++ ...++..+.+.+..+..+++|+.++...+
T Consensus 198 i~~l~~~~~v~ER~~---------~~-------------------------~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~ 243 (467)
T COG2211 198 ILLLFCFFNVKERVV---------ET-------------------------QPTKTGVKLKLKDSFLLIFKNRPLLLLLL 243 (467)
T ss_pred HHHHHHHHHhhcccC---------cc-------------------------ccCcccccccHHHHHHHHHccchHHHHHH
Confidence 655543 33455421 00 00000011112223456789999888887
Q ss_pred HHHHHHHHHHHhh----hhhhhccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcC
Q psy17080 362 VQYIIWFSVYLVY----YGLVLNLSNIGGDVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFA 437 (565)
Q Consensus 362 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~ 437 (565)
..++.+....... |...+.++.............+...+++.++...+.+|+|+|+++.++.++..++.+++....
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc
Confidence 6666555433322 223333333333344455555566677788999999999999999999999999988888333
Q ss_pred Cch-HHHHHHHHHHHHHHHHHHHHHHHhcccccch-------hhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 438 PGS-FITISLAMVGKFAISSSNVIIPIYTAELFPT-------KMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 438 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.+. +..++..++.+++.+...+..+++.+|...- +.-|...|...++..+|..++..+
T Consensus 324 ~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 324 AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 333 4555555788899999999999999987533 223666778888888888777665
No 108
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.74 E-value=3e-15 Score=147.80 Aligned_cols=345 Identities=13% Similarity=0.113 Sum_probs=209.5
Q ss_pred cccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHH--HHHHHH-Hhc----chhH-HHHHHHHHH
Q psy17080 147 WDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQL--VLGVLV-AIS----PWFE-LYLVVRFFL 218 (565)
Q Consensus 147 ~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~--~~~~~~-~~~----~~~~-~l~~~r~l~ 218 (565)
-|+ +..++|.+.++..+...+.+|+.|.++||+|.||-++....... .+.+.. .+. .|.+ ..+++-+..
T Consensus 38 ~GL---s~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l 114 (412)
T PF01306_consen 38 AGL---SGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYL 114 (412)
T ss_dssp H------HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTT
T ss_pred cCC---CHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577 88999999999999999999999999999997765544332222 222221 222 2322 233334445
Q ss_pred hhhhhhhHhhhhhhhccccccc--hhHHHHHHhhhhhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhh-cccch
Q psy17080 219 GFFCVSIVFSGFVLCMELVGGK--WLTIMGVMYLFPVPVGYIAISGIAYYSHNWRLLQWVITIPTIFFLTLWWI-MPESP 295 (565)
Q Consensus 219 G~~~~~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~lG~~~~~~l~~~~~~Wr~~~~~~~~~~~~~~~~~~~-~pesp 295 (565)
|++..+..++.-+++.++...+ +-|++=.+-+.++.++..+++.+... +-...|++....+++..++.++ -|+.+
T Consensus 115 ~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i--~p~~~fwi~s~~~~il~lll~~~~~~~~ 192 (412)
T PF01306_consen 115 GLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNI--NPNIIFWIASAAAIILLLLLLLLKPDVP 192 (412)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHSS---SS
T ss_pred HHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeee--CccHHHHHHHHHHHHHHHHHHHcCCcCc
Confidence 5555666666666666655322 23555555555555555555444332 3456677666555554444333 33332
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhh-
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVY- 374 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~- 374 (565)
+.....+ ...+++++.+..+..+++|+|++|...+.....+.......
T Consensus 193 ~~~~~~~-------------------------------~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdq 241 (412)
T PF01306_consen 193 PQAEVAD-------------------------------ALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQ 241 (412)
T ss_dssp SSS-SST-------------------------------TSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhc-------------------------------ccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 1000000 00000001111235678999999887776665544333221
Q ss_pred ----hhhhhc-cCcCCCc-HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHH
Q psy17080 375 ----YGLVLN-LSNIGGD-VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAM 448 (565)
Q Consensus 375 ----~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (565)
|...++ .++.+.. .+....+..+.|++...+..++.+|+|.|+.++++..++.+=.+... +.++.+.....-.
T Consensus 242 qf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~-~~~~~~~i~~~kl 320 (412)
T PF01306_consen 242 QFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSG-FATNPWVISLIKL 320 (412)
T ss_dssp HHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-T--SHHHHHHHHH
T ss_pred HHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHh-hhcchHHHHHHHH
Confidence 111111 1111222 22334455678899999999999999999999999999998888887 7788888888888
Q ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhHHHHH-HHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH-hhc
Q psy17080 449 VGKFAISSSNVIIPIYTAELFPTKMRNLGVGAS-SVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSV-LLL 524 (565)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~-~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~-~~l 524 (565)
+-++..........-|+++.+|++..++...+. ++..++|.++.+.+ ...++.|+...|++++.+.++..++. +.+
T Consensus 321 LH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 321 LHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 888888888888899999999999988888886 56667777766555 55788888888988888877766655 455
Q ss_pred ccCC
Q psy17080 525 PDTT 528 (565)
Q Consensus 525 ~et~ 528 (565)
++.+
T Consensus 401 ~~~~ 404 (412)
T PF01306_consen 401 KKDK 404 (412)
T ss_dssp --SS
T ss_pred cCCC
Confidence 5443
No 109
>PRK11462 putative transporter; Provisional
Probab=99.72 E-value=1.7e-14 Score=149.43 Aligned_cols=308 Identities=9% Similarity=0.032 Sum_probs=187.7
Q ss_pred eccccccCcchhhHHHHHHHHHHHhhhhhhhhccccc----ccchhh-HHHHHHHHHHHHHHHHhcch------hHHHHH
Q psy17080 145 SEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDK----FGRKKA-LMGSLVFQLVLGVLVAISPW------FELYLV 213 (565)
Q Consensus 145 ~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr----~Grr~~-l~~~~~l~~~~~~~~~~~~~------~~~l~~ 213 (565)
+..++ +...+|++..+.-+--++.-|+.|.++|| +||||. ++++.+..+++.+++-..++ ...+++
T Consensus 38 ~~~Gl---~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~ 114 (460)
T PRK11462 38 DIFGI---PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAI 114 (460)
T ss_pred HhhCC---CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 34577 78888999999999999999999999996 798654 55566777777766654443 345566
Q ss_pred HHHHHhhhhhhhHhhhhhhhccccc-cchhHHHHHHhhhhhHHHHHHHHHHHHH----h------cchhHHHHHHHHHHH
Q psy17080 214 VRFFLGFFCVSIVFSGFVLCMELVG-GKWLTIMGVMYLFPVPVGYIAISGIAYY----S------HNWRLLQWVITIPTI 282 (565)
Q Consensus 214 ~r~l~G~~~~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~lG~~~~~~l~~~----~------~~Wr~~~~~~~~~~~ 282 (565)
.-++..++.......-.++..|..+ +++|++..++...+..+|..+++.+... . .+|+....+.+++.+
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~ 194 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAF 194 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 6677788888888888899999987 7899999999998888887766554322 1 257776666666655
Q ss_pred HHHHH-hhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHH
Q psy17080 283 FFLTL-WWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISF 361 (565)
Q Consensus 283 ~~~~~-~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 361 (565)
+.... ++..+|.++- +.++...+..++.+++++.++....
T Consensus 195 i~~~i~~~~~kE~~~~---------------------------------------~~~~~~~~~~l~~~~~Nk~~~~l~~ 235 (460)
T PRK11462 195 MMLAFCFFTTKERVEA---------------------------------------PPTTTSMREDLRDIWQNDQWRIVGL 235 (460)
T ss_pred HHHHHHHhcceeccCC---------------------------------------CccCCCHHHHHHHHhCChHHHHHHH
Confidence 54433 3334443210 0000001223556778888776655
Q ss_pred HHHHHHHHHH----HhhhhhhhccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcC
Q psy17080 362 VQYIIWFSVY----LVYYGLVLNLSNIGGDVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFA 437 (565)
Q Consensus 362 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~ 437 (565)
..++.+.... ...|...+.... ...........++..+++.++++++.||+++|+.+..+..+.++..+++....
T Consensus 236 ~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~ 314 (460)
T PRK11462 236 LTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVP 314 (460)
T ss_pred HHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc
Confidence 4443333221 111222222211 11112233445567778889999999999999887655544444333333122
Q ss_pred Cch-HHHHHHHHHHHHHHHHHHHHHHHhcccccc-----hhhhh--hHHHHHHHHHHHHHHHHHHH
Q psy17080 438 PGS-FITISLAMVGKFAISSSNVIIPIYTAELFP-----TKMRN--LGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 438 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-----~~~r~--~~~g~~~~~~~lg~~i~p~i 495 (565)
... +...+..++.+++.+...+..+++.+|... +..|. ...+..+....+|..+++.+
T Consensus 315 ~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i 380 (460)
T PRK11462 315 MQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGAL 380 (460)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 222 233334445566666655666667776654 22343 44455567777777777766
No 110
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.72 E-value=5e-15 Score=142.82 Aligned_cols=343 Identities=14% Similarity=0.086 Sum_probs=233.2
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhH-HHHHHHHHHHHHHHHhcch--hH-HHHHHHHHHhhhhhhhHhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKAL-MGSLVFQLVLGVLVAISPW--FE-LYLVVRFFLGFFCVSIVFS 228 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l-~~~~~l~~~~~~~~~~~~~--~~-~l~~~r~l~G~~~~~~~~~ 228 (565)
.....+...++..+-.++-+|+.|.++|+.|+||.. -....+..+++++..++++ ++ ..++...+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 445678888889999999999999999999976654 4455556666777777655 44 4556678888888888888
Q ss_pred hhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHH--h-------------------cchhHHHHHHHHHHHHH-HH
Q psy17080 229 GFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY--S-------------------HNWRLLQWVITIPTIFF-LT 286 (565)
Q Consensus 229 ~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~--~-------------------~~Wr~~~~~~~~~~~~~-~~ 286 (565)
..+++.+..++++.++.++.-.....+|.++.-.+... . .+-|..+.+.++--++. +.
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 99999999999888888766555555555443222211 0 13566666666554443 34
Q ss_pred HhhhcccchhHHHhcCCH-HHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHH
Q psy17080 287 LWWIMPESPRWLVSMGRN-KEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYI 365 (565)
Q Consensus 287 ~~~~~pesp~~l~~~~~~-~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 365 (565)
.++.+|+.++- +.+. ...+...+ +-..+++++.+++.+.+.++..++
T Consensus 216 m~~~v~~~~~~---~~~~~~~l~~g~k-----------------------------~L~~t~k~i~~~~~i~~FLiA~~~ 263 (438)
T COG2270 216 MILNVHDAEKI---SSPPPTALRNGFK-----------------------------ELKSTFKEIRGRKNLVLFLIARFF 263 (438)
T ss_pred HHhcccccccc---cccchHHHHHHHH-----------------------------HHHHHHHHHhcccchHHHHHHHHH
Confidence 45556655430 0000 00000000 012245566666666655554443
Q ss_pred HH-HHHHHhhhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchH
Q psy17080 366 IW-FSVYLVYYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSF 441 (565)
Q Consensus 366 ~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~ 441 (565)
.. ..+.....+..+....++.+ ..+......++.++|+++.+++.+|+|.|+++.++.++..+.++... +.....
T Consensus 264 ~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~-~~~~~~ 342 (438)
T COG2270 264 YIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLI-FLEGEL 342 (438)
T ss_pred HHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHH-HccccH
Confidence 32 23333334444444444433 44556667788899999999999999999999999988888877776 556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH--H-HhhhhhHHHHHHHHHHHHH
Q psy17080 442 ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHM--Q-SINIHFPMGLLGVVGVLGG 518 (565)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~~--~-~~~~~~~~~~~~~~~~i~~ 518 (565)
..+++.++.+++.+...+..-+|..++.|++.-+..+|++++.++.+++++|++... + ..+....+....++.+++.
T Consensus 343 ~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl 422 (438)
T COG2270 343 DFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGL 422 (438)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhH
Confidence 777778888999999999999999999999999999999999999999999998332 2 2234556666666777777
Q ss_pred HHHhhcccCC
Q psy17080 519 LSVLLLPDTT 528 (565)
Q Consensus 519 ~~~~~l~et~ 528 (565)
++.+.+|+.+
T Consensus 423 ~~L~~v~~~~ 432 (438)
T COG2270 423 LLLLRVKVPG 432 (438)
T ss_pred hhEEeecCCC
Confidence 7666666653
No 111
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.71 E-value=1.1e-14 Score=149.15 Aligned_cols=346 Identities=11% Similarity=-0.013 Sum_probs=195.5
Q ss_pred eeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccc-cchhhHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHhhh
Q psy17080 144 ISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKF-GRKKALMGSLVFQLVLGVLVAISP-WFELYLVVRFFLGFF 221 (565)
Q Consensus 144 ~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~-Grr~~l~~~~~l~~~~~~~~~~~~-~~~~l~~~r~l~G~~ 221 (565)
.+++++ +..+.+.+.+.+.....++.+++|+++||+ |||++++++.++.+++.++.++.. +...+.+...+.++|
T Consensus 37 ~~~lgl---s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG 113 (493)
T PRK15462 37 TNQLKY---DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCG 113 (493)
T ss_pred HHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHh
Confidence 345788 778889999999999999999999999999 999999999999999988776543 223344444455566
Q ss_pred hhhhHhhhhhhhccccccc--hhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccchh
Q psy17080 222 CVSIVFSGFVLCMELVGGK--WLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPESPR 296 (565)
Q Consensus 222 ~~~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pesp~ 296 (565)
.|...+...+++.|.+|++ +|....++...+.++|..++|.+...+ .+|++.|.+.++..++.++.+++..+...
T Consensus 114 ~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~ 193 (493)
T PRK15462 114 YGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFT 193 (493)
T ss_pred cccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 6666677788999999875 688889999988899999999888775 48999999876544443333322111100
Q ss_pred H-HH-hcCCHHHHHHHH---HHHHH-------HcCCCCchhHHH-HHHHHh-h----hhccccCcccchhhccccHH--H
Q psy17080 297 W-LV-SMGRNKEAMKIL---GDAAK-------FNSRKLPLNLEK-LLKESV-L----STNQDVGKKVQVMDLWRTPL--I 356 (565)
Q Consensus 297 ~-l~-~~~~~~~a~~~l---~~~~~-------~~~~~~~~~~~~-~~~~~~-~----~~~~~~~~~~~~~~l~~~~~--~ 356 (565)
. .. .+...++.+... ....- .......++... ...... . --.... .+.+-.| |+|. +
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e--r~r~~~~ 270 (493)
T PRK15462 194 HTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYR-KAENQKQ--RKELGLI 270 (493)
T ss_pred cCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCHHH--HhhHHHH
Confidence 0 00 000000000000 00000 000000000000 000000 0 000000 0000000 1111 1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCc--------CCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCC--hH-----HHHH
Q psy17080 357 RLISFVQYIIWFSVYLVYYGLVLNLSN--------IGGDVYLNTIISGIVEFPAIVISIFILLKMGR--RR-----PLCL 421 (565)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~gr--r~-----~l~~ 421 (565)
....+...+.|....-.+..+.++..+ +.....+...+..+.-++..++..++-.|..| |. -+.+
T Consensus 271 ~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~ 350 (493)
T PRK15462 271 VTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFAL 350 (493)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHH
Confidence 111222223333222222222221111 11234455566666666666665555455422 21 2567
Q ss_pred HHHHHHHHHHHHhh---cCC-----chHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHH-HHHHHHH
Q psy17080 422 TTLGAGLACLMTLG---FAP-----GSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPA-GVALILI 492 (565)
Q Consensus 422 ~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~-~lg~~i~ 492 (565)
++++.+++++++.. ... +.++.+...++..++--...|+..+.++++.|++.|+..+|+..... .+|..++
T Consensus 351 g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~ 430 (493)
T PRK15462 351 GLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLA 430 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777666541 111 22445556667788888888999999999999999999999987643 6777776
Q ss_pred HHH
Q psy17080 493 PYL 495 (565)
Q Consensus 493 p~i 495 (565)
..+
T Consensus 431 g~~ 433 (493)
T PRK15462 431 GVI 433 (493)
T ss_pred HHH
Confidence 665
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.70 E-value=9.4e-15 Score=142.95 Aligned_cols=267 Identities=13% Similarity=0.002 Sum_probs=176.8
Q ss_pred hcchhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh----------------
Q psy17080 204 ISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---------------- 267 (565)
Q Consensus 204 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---------------- 267 (565)
...+|+.++++-++.|.|.+...+....++++..+++++.+.+++.+..+++|.+++|.++..+
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 4578999999999999999999999999999999999999999999999999999999887642
Q ss_pred ---cchhHHHHHHHHHHHHHHHHhhhc--ccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccC
Q psy17080 268 ---HNWRLLQWVITIPTIFFLTLWWIM--PESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVG 342 (565)
Q Consensus 268 ---~~Wr~~~~~~~~~~~~~~~~~~~~--pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (565)
.+|+++|++.+...++..+.+.+. ||..+ ++.+ ...+ +
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~--------~~~~------------------------~~~~-~---- 128 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE--------ADVA------------------------RVSS-G---- 128 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc--------cccc------------------------cccc-c----
Confidence 268999987666654444444443 44311 0000 0000 0
Q ss_pred cccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccC---cCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCCh
Q psy17080 343 KKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLS---NIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRR 416 (565)
Q Consensus 343 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr 416 (565)
+....++++++|.++...+..++..............+.. ..+.+ ..........+.++|+++++++.||+|+|
T Consensus 129 ~~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~ 208 (310)
T TIGR01272 129 DTTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG 208 (310)
T ss_pred cccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 0001123556666665544444333222222222222222 12333 23345556667789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH-
Q psy17080 417 RPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL- 495 (565)
Q Consensus 417 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i- 495 (565)
+.+.++..+..++.++.. ..+... .....++.+++.+..+|...+...+.+|++ .+++.++. .++.+|+++.|.+
T Consensus 209 ~~l~~~~~l~~~~~~l~~-~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~ 284 (310)
T TIGR01272 209 RYLAFNAFLAVLLSIGAA-LTHGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQ 284 (310)
T ss_pred HHHHHHHHHHHHHHHHHH-HcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHH
Confidence 988887777776665554 333332 233455678999999999999999988865 45666665 5677999999987
Q ss_pred -HHHHHhhhhhHHHHHH
Q psy17080 496 -WHMQSINIHFPMGLLG 511 (565)
Q Consensus 496 -~~~~~~~~~~~~~~~~ 511 (565)
...+..+...++++..
T Consensus 285 G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 285 GSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHhccchHHHHHHH
Confidence 3345567666665433
No 113
>KOG4686|consensus
Probab=99.66 E-value=6e-15 Score=133.30 Aligned_cols=367 Identities=14% Similarity=0.081 Sum_probs=209.5
Q ss_pred eEeCCCCc-ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhccccc-ccchhhHHHHHHHHHHHHHHHH---hcc
Q psy17080 132 WTYDSSSF-GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDK-FGRKKALMGSLVFQLVLGVLVA---ISP 206 (565)
Q Consensus 132 ~~y~~~~~-~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr-~Grr~~l~~~~~l~~~~~~~~~---~~~ 206 (565)
+-||.+.- +.....+.++ +..+..++.+.|.....+-++++|++.|| +|-|..-++-+....++.++.+ .++
T Consensus 58 fcyd~p~alq~~fk~d~ni---~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~ 134 (459)
T KOG4686|consen 58 FCYDAPGALQIDFKLDSNI---EYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISH 134 (459)
T ss_pred eecCCchhhhhhhhccccc---ceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHH
Confidence 45665432 3334445555 55677889999999999999999999997 8888766666666666766655 458
Q ss_pred hhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhcchhHHHHHHH---HHHHH
Q psy17080 207 WFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSHNWRLLQWVIT---IPTIF 283 (565)
Q Consensus 207 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~~Wr~~~~~~~---~~~~~ 283 (565)
.+|++.++||+.|+|.-...++-..++.-|+..|+.+.++++.....-+|..+--.+..++.+.-.-++-.. .+++.
T Consensus 135 aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~ 214 (459)
T KOG4686|consen 135 AFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLW 214 (459)
T ss_pred HHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHH
Confidence 999999999999999888888899999999999999999999887777776542222111111000000000 00000
Q ss_pred HHHHhhhcccchhHHHhcCC-HHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHH
Q psy17080 284 FLTLWWIMPESPRWLVSMGR-NKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFV 362 (565)
Q Consensus 284 ~~~~~~~~pesp~~l~~~~~-~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 362 (565)
..+-......|---....+- .+.|++.+++-.... .+ ..+.+-..-+ .|.+|...++
T Consensus 215 l~~~~~tc~~slical~lg~~D~rAerilh~e~g~~-----------------Ge----~pkLtdv~~f-~ppfw~~~ii 272 (459)
T KOG4686|consen 215 LCFEVKTCKQSLICALSLGLSDDRAERILHLEEGFL-----------------GE----EPKLTDVNTF-YPPFWVLVII 272 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhcCcc-----------------cC----Cccccccccc-CccHHHHHHH
Confidence 00000000000000001111 112222222111000 00 1111111122 2445555544
Q ss_pred HHHHHHHHHHhhh--hhhhccCcCCCcHHHHHHHHH---HHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcC
Q psy17080 363 QYIIWFSVYLVYY--GLVLNLSNIGGDVYLNTIISG---IVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFA 437 (565)
Q Consensus 363 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~ 437 (565)
..+.+. ..+.++ +..++.+.++.+......+.+ ....+...+.|.++||.|++...+.+..+..+..=....+.
T Consensus 273 cv~yyv-a~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft 351 (459)
T KOG4686|consen 273 CVLYYV-AWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT 351 (459)
T ss_pred HHHHHH-HHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh
Confidence 443332 222222 334455555554433222222 33455677889999999999887776655543322222121
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH--HHHhh-h---hhHHHHHH
Q psy17080 438 PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH--MQSIN-I---HFPMGLLG 511 (565)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~--~~~~~-~---~~~~~~~~ 511 (565)
.+.....+.+.|...+..-...+..++-+.|.++.|++.|++..+.++|-.+.|++.. .++.+ + ...|+..+
T Consensus 352 --~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 352 --FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred --hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHH
Confidence 1233445556666666666667888889999999999999999999999999999833 23222 2 33455555
Q ss_pred HHHHHHHHHHhhccc
Q psy17080 512 VVGVLGGLSVLLLPD 526 (565)
Q Consensus 512 ~~~~i~~~~~~~l~e 526 (565)
.+++....+.+.+.+
T Consensus 430 ~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 430 LMALTSVGILFYLNK 444 (459)
T ss_pred HHHHHHHHHHhheec
Confidence 566655555555543
No 114
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.56 E-value=3.3e-14 Score=149.09 Aligned_cols=172 Identities=16% Similarity=0.106 Sum_probs=129.8
Q ss_pred cccee-eccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHH---HHhcchhHHHHHHH
Q psy17080 140 GHTII-SEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVL---VAISPWFELYLVVR 215 (565)
Q Consensus 140 ~~~i~-~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~---~~~~~~~~~l~~~r 215 (565)
.|++. +++++ +....++..+...++..++.++.|+++||+|||++++.+.++..++.+. ...+++...++++|
T Consensus 273 ~p~~l~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (490)
T PRK10642 273 MPSYLSHNLHY---SEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGL 349 (490)
T ss_pred HHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 45544 45676 5556677788889999999999999999999999988877654433322 22345677888899
Q ss_pred HHHhhhhhhhHhhhhhhhccccccchhHHHHHH-hhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHHhhh
Q psy17080 216 FFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVM-YLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLTLWWI 290 (565)
Q Consensus 216 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~~~~~ 290 (565)
++.|++.+........++.|.+|++.|+...++ ++.+... ..++|.+...+ .+|+..+++..+++++.++..++
T Consensus 350 ~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~-g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 350 LMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLV-AGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 999988777777778888999999999998886 4554444 44555444332 35787777777777777777778
Q ss_pred cccchhHHHhc-----CCHHHHHHHHHHHH
Q psy17080 291 MPESPRWLVSM-----GRNKEAMKILGDAA 315 (565)
Q Consensus 291 ~pesp~~l~~~-----~~~~~a~~~l~~~~ 315 (565)
+||+|+|+..+ +|.+||++.+++++
T Consensus 429 ~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 429 MKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred hccccCCCCCCccccccchhhHHHHhhccc
Confidence 89999998865 99999999999886
No 115
>KOG2563|consensus
Probab=99.53 E-value=1e-12 Score=127.69 Aligned_cols=344 Identities=15% Similarity=0.063 Sum_probs=218.7
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc------chhH--HHHHHHHHHhhhhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS------PWFE--LYLVVRFFLGFFCVS 224 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~------~~~~--~l~~~r~l~G~~~~~ 224 (565)
+....-|...+|++.+....+++-|+.|++|-|...+++..+.+++..+-..+ +.++ ....+..+.+.+.-.
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~F 156 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPF 156 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhH
Confidence 33446788999999999999999999999999999999999999999887665 2344 666788888888777
Q ss_pred hHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---------cchhH--HHHHHHHHHHHHHHH-hhhcc
Q psy17080 225 IVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---------HNWRL--LQWVITIPTIFFLTL-WWIMP 292 (565)
Q Consensus 225 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---------~~Wr~--~~~~~~~~~~~~~~~-~~~~p 292 (565)
.......+..-|+++++|..+..+-.++..+|.+++.++...+ ..|-. +|+.....+.+.+++ .+..+
T Consensus 157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~ 236 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFT 236 (480)
T ss_pred hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6666677788999999999999988888888888877665543 13443 344333333333332 23333
Q ss_pred cchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHH
Q psy17080 293 ESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYL 372 (565)
Q Consensus 293 esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 372 (565)
+.|+. |..... ...++..-..+.+..++++++....++..+.....+.
T Consensus 237 ~~P~t-------------------------Pps~s~-------~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~ 284 (480)
T KOG2563|consen 237 KKPPT-------------------------PPSASQ-------AALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNS 284 (480)
T ss_pred CCCCC-------------------------CCchhH-------hhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHH
Confidence 33320 000000 0000112344677889998877666665554444444
Q ss_pred hhhhhhh--ccCcCC-CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCh-HHHHHHHHHHHHHHHHHhhc--C-CchHHHHH
Q psy17080 373 VYYGLVL--NLSNIG-GDVYLNTIISGIVEFPAIVISIFILLKMGRR-RPLCLTTLGAGLACLMTLGF--A-PGSFITIS 445 (565)
Q Consensus 373 ~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr-~~l~~~~~~~~~~~~~~~~~--~-~~~~~~~~ 445 (565)
.++.+.. ..+.+. ...+....+..+.++++.++.|.+.||.+.- ..+.+......++.+.+... . ...+.+..
T Consensus 285 l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~ 364 (480)
T KOG2563|consen 285 LSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFT 364 (480)
T ss_pred HHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhh
Confidence 4443331 122222 2345556666777889999999999998874 44444444444332222111 1 12244555
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH--HHHhh----hhhHHHHHHHHHHHHHH
Q psy17080 446 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH--MQSIN----IHFPMGLLGVVGVLGGL 519 (565)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~--~~~~~----~~~~~~~~~~~~~i~~~ 519 (565)
...+.+++....+|+..-+..|..-+..-++..|+.++.+++-+++-.++.. ....+ +...-+.....+++.+.
T Consensus 365 t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~ 444 (480)
T KOG2563|consen 365 TCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAI 444 (480)
T ss_pred hHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHH
Confidence 5556666666677888888888766666688899999999888887777722 23333 33344555566666666
Q ss_pred HHhhcccCC
Q psy17080 520 SVLLLPDTT 528 (565)
Q Consensus 520 ~~~~l~et~ 528 (565)
+..++++..
T Consensus 445 lva~~r~~y 453 (480)
T KOG2563|consen 445 LVAFFRPDY 453 (480)
T ss_pred HHhhhhhhH
Confidence 665555543
No 116
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.50 E-value=7e-11 Score=114.86 Aligned_cols=314 Identities=15% Similarity=0.111 Sum_probs=198.7
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhccccccc-----chhhHHH-HHHHHHHHHHHHHhc-----c---
Q psy17080 141 HTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFG-----RKKALMG-SLVFQLVLGVLVAIS-----P--- 206 (565)
Q Consensus 141 ~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~G-----rr~~l~~-~~~l~~~~~~~~~~~-----~--- 206 (565)
.-++.|+++ ..+..+...++..+-.. ..+.+|+.||+.+ ||..+++ +.++...+..+.+++ .
T Consensus 4 RVMIvEL~v---pA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~ 79 (403)
T PF03209_consen 4 RVMIVELGV---PAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQ 79 (403)
T ss_pred hhHHHHhcc---HHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 346778898 88888888888877655 6889999999998 7765544 566666555554442 2
Q ss_pred ----hh--H--HHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHH-hcch---hHHH
Q psy17080 207 ----WF--E--LYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY-SHNW---RLLQ 274 (565)
Q Consensus 207 ----~~--~--~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~-~~~W---r~~~ 274 (565)
+. + ...+...+.|+|.+.......+++.|..++++|+++.++......+|.++++.+... +.++ |...
T Consensus 80 ~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~ 159 (403)
T PF03209_consen 80 QSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQ 159 (403)
T ss_pred ccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHH
Confidence 22 2 344567888999999999999999999999999999999999999999998877654 3332 3333
Q ss_pred HHHHHH--HHHHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccc
Q psy17080 275 WVITIP--TIFFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWR 352 (565)
Q Consensus 275 ~~~~~~--~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 352 (565)
.+.... .+...++..+=.|.++- +. ...+++++..-...++++..
T Consensus 160 v~~~~a~i~~~l~~ia~wg~E~r~~-------~~--------------------------~~~~~~~~~~f~~a~~~~~~ 206 (403)
T PF03209_consen 160 VIQGVALIALLLNLIALWGQEPRRS-------RR--------------------------AAAAERPRPPFREAWRQVWA 206 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCc-------cc--------------------------ccCCCCCCccHHHHHHHHHh
Confidence 332222 22222222222232110 00 00001111112234566677
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCC-----CcH---HHHHHHHHHHHHHHHHHHHHHHh-hcCChHHHHHHH
Q psy17080 353 TPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIG-----GDV---YLNTIISGIVEFPAIVISIFILL-KMGRRRPLCLTT 423 (565)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~l~d-r~grr~~l~~~~ 423 (565)
+|+.++.+...++..+ .|+.....++.++ .++ .....+.+.+.++|..+.+++.. |.++++...++.
T Consensus 207 ~~~a~~f~~fl~l~t~----a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~ 282 (403)
T PF03209_consen 207 SPQARRFFVFLFLGTL----AFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGC 282 (403)
T ss_pred CCChhHHHHHHHHHHH----HHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 7877776665553332 2333333344433 232 23344556677888888787665 677777777777
Q ss_pred HHHHHHHHHHh--hcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHH----HHHHHHHHH
Q psy17080 424 LGAGLACLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAG----VALILIPYL 495 (565)
Q Consensus 424 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~----lg~~i~p~i 495 (565)
.+..+++.++. ....+.+.+....++.|++.+.......+...++.+++..|..+|.-..... +|.+++..+
T Consensus 283 ~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 283 LLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666655443 2344557777778888888888877777888888888888999988765554 444444444
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.47 E-value=4.8e-11 Score=118.22 Aligned_cols=368 Identities=12% Similarity=-0.002 Sum_probs=214.6
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhccccc-ccchhhHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHhhhhhhhHhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDK-FGRKKALMGSLVFQLVLGVLVAISP--WFELYLVVRFFLGFFCVSIVFSG 229 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr-~Grr~~l~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~ 229 (565)
++....-+.++|..-.-+..+++|+++|| .|+|+.+..+.++..++.++.+.+. +...++++-.+.++|.|..-+..
T Consensus 59 ~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~Ni 138 (498)
T COG3104 59 DETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNI 138 (498)
T ss_pred ChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccH
Confidence 55555555666666666788899999999 6999999999999999999999984 78899999999999999999999
Q ss_pred hhhhccccccc--hhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhcccc---------h
Q psy17080 230 FVLCMELVGGK--WLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPES---------P 295 (565)
Q Consensus 230 ~~~i~e~~~~~--~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pes---------p 295 (565)
.+++.|.+|++ +|....+++.++.++|.+++|.+..++ .+|...|.+.++-..+.++.++..+.. |
T Consensus 139 S~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~ 218 (498)
T COG3104 139 SSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDP 218 (498)
T ss_pred HHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCc
Confidence 99999999854 466778889999999999999888775 478888888777666655554443211 1
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHc--CCCCchhHHHHHHHH---hhh---hccccCcccchhhccccHHHHHHHHHHHHHH
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFN--SRKLPLNLEKLLKES---VLS---TNQDVGKKVQVMDLWRTPLIRLISFVQYIIW 367 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~--~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 367 (565)
.-+..+................. ............... ... .+....++.. .+.-|-.....+++...+.|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl~~~iFW 297 (498)
T COG3104 219 NPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVF-DERRRLLAAIPLFLFAVIFW 297 (498)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccH-HHHHHHHHHHHHHHHHHHHH
Confidence 11111111100111111100000 000000000000000 000 0000000000 01001111122223333334
Q ss_pred HHH-----HHhhhhhhhccCc-C--CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCh-------HHHHHHHHHHHHHHHH
Q psy17080 368 FSV-----YLVYYGLVLNLSN-I--GGDVYLNTIISGIVEFPAIVISIFILLKMGRR-------RPLCLTTLGAGLACLM 432 (565)
Q Consensus 368 ~~~-----~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr-------~~l~~~~~~~~~~~~~ 432 (565)
... .+..|.......+ + ..+..+...+..+.-++..++..++..|.+++ .-+.+++.+++.+.++
T Consensus 298 ~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~ 377 (498)
T COG3104 298 ALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLI 377 (498)
T ss_pred HHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 322 2222222221112 2 23445556666666677777777766664332 2244555555555555
Q ss_pred Hhhc---C---C---chHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH-------
Q psy17080 433 TLGF---A---P---GSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW------- 496 (565)
Q Consensus 433 ~~~~---~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~------- 496 (565)
+... . . +.++.+...++..++--...|+...++..+.|+...+..+++.......|..++..+.
T Consensus 378 l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~ 457 (498)
T COG3104 378 LLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTD 457 (498)
T ss_pred HHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccc
Confidence 4422 1 1 1255566667778888888899999999999999999999988776666666655441
Q ss_pred -HHHHhhhhhHHHHHHHHHHHHHHHH
Q psy17080 497 -HMQSINIHFPMGLLGVVGVLGGLSV 521 (565)
Q Consensus 497 -~~~~~~~~~~~~~~~~~~~i~~~~~ 521 (565)
..+.......|+.++...++..+..
T Consensus 458 ~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 458 PAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 2233445556777777666555543
No 118
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.45 E-value=4.6e-13 Score=114.73 Aligned_cols=133 Identities=20% Similarity=0.298 Sum_probs=115.8
Q ss_pred HHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccccccc
Q psy17080 161 EMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGK 240 (565)
Q Consensus 161 ~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~ 240 (565)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|..|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 45567888999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhccc
Q psy17080 241 WLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPE 293 (565)
Q Consensus 241 ~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pe 293 (565)
+|++..++......+|..+++.+...+ .+|++.+++.++..++..+. .++.||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999988887765 47999988877776665544 344454
No 119
>KOG2816|consensus
Probab=99.40 E-value=4.8e-11 Score=121.28 Aligned_cols=303 Identities=16% Similarity=0.148 Sum_probs=186.4
Q ss_pred HHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhh--hhhhHhhhhhhhccccccc
Q psy17080 163 VFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFF--CVSIVFSGFVLCMELVGGK 240 (565)
Q Consensus 163 ~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~i~e~~~~~ 240 (565)
.-.+...+.++..|.++||+|||..+...+....+..+...+.. +++++ +.|+. .+.......++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchh
Confidence 44566778899999999999999999999999888888777766 33333 44443 2455667789999999999
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHH-hhhcccchhHHHhcCCHHHHHHHHHHHHH
Q psy17080 241 WLTIMGVMYLFPVPVGYIAISGIAYYSH---NWRLLQWVITIPTIFFLTL-WWIMPESPRWLVSMGRNKEAMKILGDAAK 316 (565)
Q Consensus 241 ~r~~~~~~~~~~~~lG~~~~~~l~~~~~---~Wr~~~~~~~~~~~~~~~~-~~~~pesp~~l~~~~~~~~a~~~l~~~~~ 316 (565)
+|....++....+..+..++|.++.... +.-..+.+..+..++..+. .+++||+-.- +.+.+ + ...+
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~---~~~~~-~-----~~~~ 215 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE---KERSD-A-----TLRE 215 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc---ccccc-c-----cccc
Confidence 9999999999988888888888887753 4445666666665555544 6678887320 00000 0 0000
Q ss_pred Hc-CCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhh-hhhhc-cCcCCCcHH---H
Q psy17080 317 FN-SRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYY-GLVLN-LSNIGGDVY---L 390 (565)
Q Consensus 317 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~---~ 390 (565)
.. +.....+.. +........-.+|......+...+........+. ...++ -..++.+.. .
T Consensus 216 ~~~~~~~~~~~~--------------~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~ 281 (463)
T KOG2816|consen 216 LTPGSLDSSHVA--------------DAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSD 281 (463)
T ss_pred cCCCcccchhhh--------------hhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHH
Confidence 00 000000000 0000001111122222222222211111111111 11111 223344432 2
Q ss_pred HHHHHHHHHHHHHHHHH-HHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy17080 391 NTIISGIVEFPAIVISI-FILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF 469 (565)
Q Consensus 391 ~~~~~~~~~~~~~~~~~-~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 469 (565)
.....+....++.++.. .+...+|-|+....++..-.+..+... +....|..+....+.. ......+...+..+...
T Consensus 282 ~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~a-f~~~~w~~~~~~v~~~-~~~~~~pa~~s~~s~~v 359 (463)
T KOG2816|consen 282 LLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFA-FATETWMMFAAGVVVA-LAGIVFPAIRAFASILV 359 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHH-HhccchhhhHHHHHHH-hhcchhHHHHhHHHhhc
Confidence 33444555666666555 677788888888888888888888887 6677666555544443 33445688888899999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 470 PTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 470 p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.++.+|++.++...+..+.++++|.+
T Consensus 360 ~~~e~g~v~~~is~i~~l~~~~~~~~ 385 (463)
T KOG2816|consen 360 SPEEQGKVFGIISGIEGLSGVVSPAL 385 (463)
T ss_pred ccccccchhhHHHHHHHHhhhhhHHH
Confidence 99999999999999999999999988
No 120
>KOG2325|consensus
Probab=99.39 E-value=7.3e-12 Score=125.38 Aligned_cols=143 Identities=19% Similarity=0.149 Sum_probs=112.4
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccc-hhhHHHHHHHHHHHHHHH-Hhc---c-hhHHHHHHHHHHhhhhhhhH
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGR-KKALMGSLVFQLVLGVLV-AIS---P-WFELYLVVRFFLGFFCVSIV 226 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Gr-r~~l~~~~~l~~~~~~~~-~~~---~-~~~~l~~~r~l~G~~~~~~~ 226 (565)
+....|++.++..+|.+++++.+|+.+.|.|. |+.++.+.++..+++++. ++. + ..+.++++|++.|+|. +..
T Consensus 69 ~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~-~n~ 147 (488)
T KOG2325|consen 69 TATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV-GNF 147 (488)
T ss_pred CcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc-ccH
Confidence 44567999999999999999999999999997 888899999999999887 432 3 6778999999999995 456
Q ss_pred hhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc-----c-----------hhHHHHHHHHHHHHHHHH-hh
Q psy17080 227 FSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH-----N-----------WRLLQWVITIPTIFFLTL-WW 289 (565)
Q Consensus 227 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~-----~-----------Wr~~~~~~~~~~~~~~~~-~~ 289 (565)
....+|+++....++|.++.+....+..+|.++||.+...+. | +..+-|+.++..++.++. .+
T Consensus 148 a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~ 227 (488)
T KOG2325|consen 148 AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILF 227 (488)
T ss_pred HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHh
Confidence 677899999888999999999998888888888887765542 2 233455666665555444 45
Q ss_pred hcccchh
Q psy17080 290 IMPESPR 296 (565)
Q Consensus 290 ~~pesp~ 296 (565)
++.|.++
T Consensus 228 ~f~E~~~ 234 (488)
T KOG2325|consen 228 FFKEVYR 234 (488)
T ss_pred heeeccc
Confidence 5677654
No 121
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.37 E-value=4.9e-12 Score=135.94 Aligned_cols=140 Identities=15% Similarity=0.031 Sum_probs=121.1
Q ss_pred hhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhcc
Q psy17080 156 LESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCME 235 (565)
Q Consensus 156 ~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e 235 (565)
...+...+..++.++|.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.++.++...++++|
T Consensus 596 ~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 596 MIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777789999999999999999999999999999999999999999988888899999999988999999999999
Q ss_pred ccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc--chhHHHHHHHHHHHHHHHHhhhcccch
Q psy17080 236 LVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH--NWRLLQWVITIPTIFFLTLWWIMPESP 295 (565)
Q Consensus 236 ~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~--~Wr~~~~~~~~~~~~~~~~~~~~pesp 295 (565)
++|.+.|++++++......+|.+++|.++..+. +...+|++.++..++..++.+++||+.
T Consensus 676 l~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 676 LYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999998876442 334567777777666666677789873
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.33 E-value=1.1e-09 Score=112.24 Aligned_cols=363 Identities=14% Similarity=0.107 Sum_probs=204.6
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccc---c--chhhHHHHHHHHHHHHHHHHhc----chhHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKF---G--RKKALMGSLVFQLVLGVLVAIS----PWFEL 210 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~---G--rr~~l~~~~~l~~~~~~~~~~~----~~~~~ 210 (565)
.+-+.+++++ +..+.....+...+...+ -++.|.++|-+ | ||+-++++.++..++.+..+.. .+...
T Consensus 13 ~~~l~~~l~l---s~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 13 YPFLKDDLGL---SPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 3456677888 777777777777776654 45789999975 3 5556666777766655555543 35667
Q ss_pred HHHHHHHHhhhhhhhHhhhhhhhccccc--cchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHH
Q psy17080 211 YLVVRFFLGFFCVSIVFSGFVLCMELVG--GKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFL 285 (565)
Q Consensus 211 l~~~r~l~G~~~~~~~~~~~~~i~e~~~--~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~ 285 (565)
..+.-++..+|.+.....+-+++.|... ++.|+...+.......+|.+++..+++.. .++|..|.+.++..++..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 7777888999999999999999999984 44477878888888888888887776554 367888888766655554
Q ss_pred HHh-hhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHH-HH
Q psy17080 286 TLW-WIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISF-VQ 363 (565)
Q Consensus 286 ~~~-~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~ 363 (565)
+.. +..+|.+. .+.++... ..+++.+... . ..++.....++.++.+.++...+ ..
T Consensus 169 ~~~~~~~~e~~~-----~~~~~~~~-------~~~~~~~~~~----~-------~~~~~~~~l~~~~~~~~i~~~~~~~~ 225 (433)
T PF03092_consen 169 IVALFLLEERKV-----RPADEVFS-------FGKEEVPCLF----G-------SFREQLSELWRALQQRAIWQPILFFI 225 (433)
T ss_pred HHHHHhhhhccc-----cccchhhc-------ccccccchhh----H-------HHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 443 34444210 00000000 0000000000 0 00011223455666777666555 22
Q ss_pred HHHHHHHHH----hhhhhhhccCcCCCcHHH---HHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc
Q psy17080 364 YIIWFSVYL----VYYGLVLNLSNIGGDVYL---NTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF 436 (565)
Q Consensus 364 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~ 436 (565)
++....... .+|.........+.+... ...+.+++.+.|..+......+..-|+++.+..++..+..+.-..+
T Consensus 226 ~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~l 305 (433)
T PF03092_consen 226 FFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLL 305 (433)
T ss_pred HHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEE
Confidence 221111110 111111111111123222 2233344445555555555555666777776666655544432211
Q ss_pred ---------CCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH-HHH-HHh----
Q psy17080 437 ---------APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL-WHM-QSI---- 501 (565)
Q Consensus 437 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i-~~~-~~~---- 501 (565)
.++.+....-.++..+.....+-.....++|+.|+..-|+.+++...+.++|..++..+ ..+ ...
T Consensus 306 v~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~ 385 (433)
T PF03092_consen 306 VTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTR 385 (433)
T ss_pred EEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 11222222233444555555566667889999999999999999988888888777666 111 111
Q ss_pred ----hhhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 502 ----NIHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 502 ----~~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
+.....++..++.++...+..++|+.++
T Consensus 386 ~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 386 DDFSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 1233344555555556666678888665
No 123
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.30 E-value=3.1e-13 Score=140.76 Aligned_cols=346 Identities=14% Similarity=0.104 Sum_probs=3.0
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc-------------
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP------------- 206 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~------------- 206 (565)
.++|.+.|++ ++.+.|++.+.+-++..+..++..++.+|..|-|.+-.+.++.+++++++++-+
T Consensus 26 lttiErRF~l---~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~ 102 (539)
T PF03137_consen 26 LTTIERRFGL---SSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASN 102 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccc
Confidence 7899999999 999999999999999999999999999998888888899999999988876410
Q ss_pred -------------------------------------hhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHh
Q psy17080 207 -------------------------------------WFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMY 249 (565)
Q Consensus 207 -------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~ 249 (565)
-+..++++.++.|+|....++...+|+-|.+++++-+...++.
T Consensus 103 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~ 182 (539)
T PF03137_consen 103 SNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGIL 182 (539)
T ss_dssp -------------------------------------------------SSS----------------------------
T ss_pred cccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhh
Confidence 0246788999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhc-------------------------chhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCH
Q psy17080 250 LFPVPVGYIAISGIAYYSH-------------------------NWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRN 304 (565)
Q Consensus 250 ~~~~~lG~~~~~~l~~~~~-------------------------~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~ 304 (565)
.....+|+++|-+++.... .|..-|++.++..++..+..+++|+..+-. +++.
T Consensus 183 ~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~--~~~~ 260 (539)
T PF03137_consen 183 YAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGT--SERQ 260 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCc--cccc
Confidence 9999998888877765420 244455566666666666666666542211 0001
Q ss_pred HHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHH-HHHhhhhhhhccCc
Q psy17080 305 KEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFS-VYLVYYGLVLNLSN 383 (565)
Q Consensus 305 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 383 (565)
++.+...++..+.+.++..+ .+.........+.-....+++++||.+....+...+..+. ..+..|..-+...+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~Q 335 (539)
T PF03137_consen 261 EEKESSERKEEDSDKDSFKD-----PKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQ 335 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chhhhhhcchhhhhhhcccc-----cccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11100000000000000000 0000000011122345678889998877666655554443 33344444444455
Q ss_pred CCCcHHHHHHHHHHH----HHHHHHHHHHHHhhcCC--hHHHHHHHHHHHHHHHH---Hhhc-----------CCc----
Q psy17080 384 IGGDVYLNTIISGIV----EFPAIVISIFILLKMGR--RRPLCLTTLGAGLACLM---TLGF-----------APG---- 439 (565)
Q Consensus 384 ~~~~~~~~~~~~~~~----~~~~~~~~~~l~dr~gr--r~~l~~~~~~~~~~~~~---~~~~-----------~~~---- 439 (565)
++.+......+.++. ..+|.+++|++++|++- |..+.+..+...+..+. ...+ .+.
T Consensus 336 F~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~ 415 (539)
T PF03137_consen 336 FGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNST 415 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCcccccc
Confidence 565555555555544 44678899999998753 44443333333332222 1100 000
Q ss_pred ------------------------h-----------HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHH
Q psy17080 440 ------------------------S-----------FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVP 484 (565)
Q Consensus 440 ------------------------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 484 (565)
. ..+.+..++..+..+.........+-..+|++.|+.+.|+..++
T Consensus 416 ~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~ 495 (539)
T PF03137_consen 416 SSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLI 495 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHH
Confidence 0 11222223333333444445556667889999999999999776
Q ss_pred HH-HHHHHHHHH
Q psy17080 485 AG-VALILIPYL 495 (565)
Q Consensus 485 ~~-lg~~i~p~i 495 (565)
.+ +|.+-+|++
T Consensus 496 ~rllg~IPgPIi 507 (539)
T PF03137_consen 496 IRLLGFIPGPII 507 (539)
T ss_dssp ------------
T ss_pred HHhhcCcchHHH
Confidence 55 566778887
No 124
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.14 E-value=4.4e-10 Score=114.60 Aligned_cols=146 Identities=14% Similarity=0.128 Sum_probs=117.5
Q ss_pred eeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhh
Q psy17080 144 ISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCV 223 (565)
Q Consensus 144 ~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 223 (565)
.+++++ +..+.+++.+...++..++.++.|+++||+|||+.+..+.+...+......+.++.+.+++.+++.+++.+
T Consensus 244 ~~~~~~---~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g 320 (393)
T PRK15011 244 INELHL---PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIG 320 (393)
T ss_pred HHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 356777 66778888888778888899999999999999998887776666555555567788888889999998888
Q ss_pred hhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhccc
Q psy17080 224 SIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPE 293 (565)
Q Consensus 224 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pe 293 (565)
...+....+..|..|+ +|+++.++.+....+|..+++.++..+ .+|+..+++.+++.++.++..+++||
T Consensus 321 ~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 321 ILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 7777777888898875 589999998888888888888877664 37999998888887777777777665
No 125
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.14 E-value=4.1e-10 Score=115.46 Aligned_cols=140 Identities=14% Similarity=0.036 Sum_probs=116.0
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHHHhhhhhhhHhhhh
Q psy17080 155 SLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP----WFELYLVVRFFLGFFCVSIVFSGF 230 (565)
Q Consensus 155 ~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~ 230 (565)
...+...++..++..++.++.|+++||+|||+++..+.++.+++..+..... +++.+++.+++.|++.+...+...
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~ 330 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS 330 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568889999999999999999999999999999999999988877666632 245677889999999998888989
Q ss_pred hhhccccccchhHHHHHHhh-hhhHHHHHHHHHHHHHh---------cchhHHHHHHHHHHHHHHHH-hhhcccc
Q psy17080 231 VLCMELVGGKWLTIMGVMYL-FPVPVGYIAISGIAYYS---------HNWRLLQWVITIPTIFFLTL-WWIMPES 294 (565)
Q Consensus 231 ~~i~e~~~~~~r~~~~~~~~-~~~~lG~~~~~~l~~~~---------~~Wr~~~~~~~~~~~~~~~~-~~~~pes 294 (565)
.++.|++|+++|+++.++.+ ....+|.+++|.+++.+ .+|+..|++.++..++..++ .++++|+
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999997 66788888888877653 25999998877775555444 5667776
No 126
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.13 E-value=1.6e-09 Score=110.34 Aligned_cols=140 Identities=18% Similarity=0.154 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
........+...++.++.|++.||+|||+.+..+.++.+++.++.. +.++.+...+..++.+++.+...+....++.|.
T Consensus 32 ~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 110 (399)
T TIGR00893 32 GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA-FAGAYVSLYILRVLLGAAEAPFFPGIILIVASW 110 (399)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Confidence 4555666778888999999999999999999999888888877776 556667777777888888888889999999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH-hhcccCCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSV-LLLPDTTG 529 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~-~~l~et~~ 529 (565)
+|++.|+++.++.+....+|..++|.+ ...+..++...+.+.+++.++..+.. +..||++.
T Consensus 111 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 111 FPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred CCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 999999999999999999999999988 33566678888888877777665544 44555543
No 127
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.13 E-value=1.5e-09 Score=112.16 Aligned_cols=150 Identities=14% Similarity=0.086 Sum_probs=112.9
Q ss_pred hhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHH
Q psy17080 378 VLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAI 454 (565)
Q Consensus 378 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (565)
+...++++.+. ........++..++.++.|++.||+|||+.+.++.++.+++.++.. +.++.+...+..++.+++.
T Consensus 47 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~g~~~ 125 (434)
T PRK11663 47 PEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFG-FSSSLWAFALLWVLNAFFQ 125 (434)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHH
Confidence 33444555443 3444455667788999999999999999999999999888887776 5555555555556667777
Q ss_pred HHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHH-HHhhcccCC
Q psy17080 455 SSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGL-SVLLLPDTT 528 (565)
Q Consensus 455 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~-~~~~l~et~ 528 (565)
+..++....+..|.+|++.|++++|+.+....+|.+++|.+ ...+..++...|.+.+++.++..+ ..+++||+.
T Consensus 126 g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p 202 (434)
T PRK11663 126 GWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKP 202 (434)
T ss_pred HccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 77778888999999999999999999999999999999887 344566888888887776655443 345566643
No 128
>KOG3098|consensus
Probab=99.13 E-value=3.1e-08 Score=99.45 Aligned_cols=299 Identities=12% Similarity=0.082 Sum_probs=184.9
Q ss_pred HHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccccccc
Q psy17080 161 EMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGK 240 (565)
Q Consensus 161 ~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~ 240 (565)
+++.+..+.+++++.+.+.|+.|.|+.+.++........+..-+ +|-+-+++.-.+.|+|.+..+..--.++.|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 66777778889999999999999999999999988887776655 55667888999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHHhc-----------chh-HH----------HHHHHHH---HHHHHHHhhhcccch
Q psy17080 241 WLTIMGVMYLFPVPVGYIAISGIAYYSH-----------NWR-LL----------QWVITIP---TIFFLTLWWIMPESP 295 (565)
Q Consensus 241 ~r~~~~~~~~~~~~lG~~~~~~l~~~~~-----------~Wr-~~----------~~~~~~~---~~~~~~~~~~~pesp 295 (565)
.+.+..++.......+.++|+.+..... +-+ .. ..+.+++ ..+..+...+.|..
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~- 213 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSK- 213 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCcc-
Confidence 9999988888888888888776655431 111 11 1111111 11111112222221
Q ss_pred hHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHH--Hh
Q psy17080 296 RWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVY--LV 373 (565)
Q Consensus 296 ~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~ 373 (565)
+.. .+.+. .+....+.-....++++++++..+....+..++... ..
T Consensus 214 ~~~------~~~~~--------------------------~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~ 261 (461)
T KOG3098|consen 214 DVV------NCKSS--------------------------SETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWIS 261 (461)
T ss_pred chh------hhhhh--------------------------ccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHh
Confidence 000 00000 000000011123456667766655554444433222 12
Q ss_pred hhhhhhccC-cCCCc-H---HHHHHHHHHHHHHHHHHHHHHHhh---cCChHHHHHHHHHHHHHHHHHhhcCCch-----
Q psy17080 374 YYGLVLNLS-NIGGD-V---YLNTIISGIVEFPAIVISIFILLK---MGRRRPLCLTTLGAGLACLMTLGFAPGS----- 440 (565)
Q Consensus 374 ~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~dr---~grr~~l~~~~~~~~~~~~~~~~~~~~~----- 440 (565)
.|...+... ..+.+ . .......+++++.+....+.+.+| +||++.+.++..+..+.+++...-.|.+
T Consensus 262 iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~ 341 (461)
T KOG3098|consen 262 IYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRP 341 (461)
T ss_pred ccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCC
Confidence 222222222 22222 1 234455667777777777777665 6788888888777777766655333211
Q ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHH
Q psy17080 441 ------------FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPY 494 (565)
Q Consensus 441 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~ 494 (565)
....+..++.|++-.......+.++..++| +.|..+.++.-+-..++..++-+
T Consensus 342 t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 342 TDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred CcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhh
Confidence 345566677788888888888999999994 56788888876666666555433
No 129
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.13 E-value=8.1e-09 Score=101.86 Aligned_cols=325 Identities=11% Similarity=0.023 Sum_probs=190.5
Q ss_pred HHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccccc
Q psy17080 159 LAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVG 238 (565)
Q Consensus 159 l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~ 238 (565)
-+.-...-.++...++...+.|..|.|++++++.+...+..++..+.++...+-+..++-|++.+. ..+.++++--..+
T Consensus 45 ~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~ 123 (412)
T PF01770_consen 45 EIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVD 123 (412)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecC
Confidence 345556666777888999999999999999999999999999999999999999999999999655 6777899999999
Q ss_pred cchhHHHHHHhhhhhHHHHHHHHHHHHHh-----cchhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHHHHHHHHHH
Q psy17080 239 GKWLTIMGVMYLFPVPVGYIAISGIAYYS-----HNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNKEAMKILGD 313 (565)
Q Consensus 239 ~~~r~~~~~~~~~~~~lG~~~~~~l~~~~-----~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~ 313 (565)
+++-.++.+...++.-+|..+++.++..+ .+.+.++++......+.++..+++|..++-+.-+++..+... .++
T Consensus 124 ~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~-~~~ 202 (412)
T PF01770_consen 124 KEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQD-ANE 202 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccc-ccc
Confidence 99989998888888888888888777664 256666666665556666667788876653333332211111 000
Q ss_pred HHHHcCCCCchhHHHHHHHHhhhhcccc-------CcccchhhccccHHHHHHHHHHHHHHHH-HHHhhhhhhhccCc--
Q psy17080 314 AAKFNSRKLPLNLEKLLKESVLSTNQDV-------GKKVQVMDLWRTPLIRLISFVQYIIWFS-VYLVYYGLVLNLSN-- 383 (565)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 383 (565)
....+..+.+++. .+.....+..+. .-...+++..++|.+++..+--.+...+ ....+|...++...
T Consensus 203 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~ 279 (412)
T PF01770_consen 203 SESDKMNESPESS---SSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPP 279 (412)
T ss_pred ccccccccccccc---cccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC
Confidence 0000000000000 000000000000 0112345556677665554433332222 22233443333222
Q ss_pred CCCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHH--HHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHH
Q psy17080 384 IGGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLC--LTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSN 458 (565)
Q Consensus 384 ~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (565)
...... ..-....+.+.++.+..|++-.++.+-.-+. ...++.+.+.+++. ...+.|...+..++.+.......
T Consensus 280 ~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~-~t~~Iwv~Y~~yIif~~~y~fli 358 (412)
T PF01770_consen 280 SDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMS-FTGNIWVCYAGYIIFRSLYMFLI 358 (412)
T ss_pred CCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHH
Confidence 111111 2222334445556667777755555533332 23333344444444 55566777777777666666666
Q ss_pred HHHHHhcccccchhhhhhHHHHHHHHHHHHH
Q psy17080 459 VIIPIYTAELFPTKMRNLGVGASSVPAGVAL 489 (565)
Q Consensus 459 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~ 489 (565)
++...-++.....+.-+..+|+.++++.+-.
T Consensus 359 TiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 359 TIASFQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred HHHHHHHHHhccccceeeeeeeHHHHHHHHH
Confidence 7666666666666666777777766554433
No 130
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.12 E-value=1.9e-09 Score=110.31 Aligned_cols=140 Identities=14% Similarity=0.084 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
.....+..+...++.++.|++.||+|||+.+..+.++.+++.++.. +.++.+...+..++.+++.+...+....++.|.
T Consensus 50 g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~ 128 (405)
T TIGR00891 50 ASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACG-FAPGYITMFIARLVIGIGMGGEYGSSAAYVIES 128 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHh
Confidence 4455566677888999999999999999999999888888877776 556666666777788888888888889999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHhh--hhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYLW--HMQSIN--IHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~~--~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
+|++.|+.+.|+.++...+|.+++|.+. .....+ +...+.+.++..++..+....+||++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 193 (405)
T TIGR00891 129 WPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAED 193 (405)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 9999999999999999999999999872 223333 666676655555555445566777643
No 131
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.12 E-value=3.3e-10 Score=116.61 Aligned_cols=142 Identities=11% Similarity=0.086 Sum_probs=116.8
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVL 232 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 232 (565)
+..+.|++.++..++..++.++.|+++||+|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+....+
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 339 (420)
T PRK09528 260 GTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKY 339 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567899999999999999999999999999999999999999998999999999999999999999988888888899
Q ss_pred hccccccchhHHHHHH-hhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH-hhhcccc
Q psy17080 233 CMELVGGKWLTIMGVM-YLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL-WWIMPES 294 (565)
Q Consensus 233 i~e~~~~~~r~~~~~~-~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~-~~~~pes 294 (565)
+.|.+|++.|+...+. ++.+..+|.++++.+.+.+ .||+..|++.++..++..+. ++++++.
T Consensus 340 ~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 340 ITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999988876544 5566778888887776654 38999999877776554444 4444443
No 132
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.11 E-value=2.9e-09 Score=107.22 Aligned_cols=157 Identities=12% Similarity=0.061 Sum_probs=113.8
Q ss_pred HHHHHHhhhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC-----
Q psy17080 367 WFSVYLVYYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP----- 438 (565)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~----- 438 (565)
.+.........+.+..+.+.+. ........+..+++.++.|++.||+|||+.+..+.++.+++.++.. +..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~~ 90 (365)
T TIGR00900 12 LIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP-FVALLGGL 90 (365)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH-HHHHcCCC
Confidence 3333333344444444444433 3444555667778899999999999999999988887777666555 222
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHH
Q psy17080 439 GSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVL 516 (565)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i 516 (565)
+.+...+..++.+++.+...+...++..|.+|++.|+++.|+.+....+|.+++|.+ ...+..++...+++.++..++
T Consensus 91 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~ 170 (365)
T TIGR00900 91 NIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAI 170 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 446666677777888888888899999999999999999999999999999999988 334566778778777776666
Q ss_pred HHHHHhhc
Q psy17080 517 GGLSVLLL 524 (565)
Q Consensus 517 ~~~~~~~l 524 (565)
+.+..+.+
T Consensus 171 ~~~~~~~~ 178 (365)
T TIGR00900 171 SALLIVSV 178 (365)
T ss_pred HHHHHHhc
Confidence 55544443
No 133
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.10 E-value=4.8e-10 Score=112.13 Aligned_cols=147 Identities=20% Similarity=0.217 Sum_probs=130.5
Q ss_pred cceeecc-ccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchh-hHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q psy17080 141 HTIISEW-DLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKK-ALMGSLVFQLVLGVLVAISPWFELYLVVRFFL 218 (565)
Q Consensus 141 ~~i~~~~-~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~-~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~ 218 (565)
+.+.++. +. +..+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+...+.++.+.+.+..++.
T Consensus 199 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (352)
T cd06174 199 PLYLQEVLGL---SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLL 275 (352)
T ss_pred HHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3344333 66 7788899999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhh
Q psy17080 219 GFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWI 290 (565)
Q Consensus 219 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~ 290 (565)
|++.+...+....++.|..|+++|++..++.+....+|..+++.+...+ .+|+..+++.++..++..+..++
T Consensus 276 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 276 GFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999999999999999999999999888765 48999999988887777665543
No 134
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.10 E-value=1.1e-09 Score=111.85 Aligned_cols=137 Identities=14% Similarity=0.099 Sum_probs=116.0
Q ss_pred hHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccc
Q psy17080 157 ESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMEL 236 (565)
Q Consensus 157 ~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~ 236 (565)
.++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.....+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 330 (399)
T PRK05122 251 AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKR 330 (399)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 45667788889999999999999999999999999888888888888888888888999999999998888888888899
Q ss_pred cccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhccc
Q psy17080 237 VGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPE 293 (565)
Q Consensus 237 ~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pe 293 (565)
.|+++|+++.++.+....+|..+++.+...+ .+|++.+++.++..++.++..+++++
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 331 VPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999998888888777665554 37999999888777776666555544
No 135
>PRK10054 putative transporter; Provisional
Probab=99.09 E-value=6.9e-09 Score=105.72 Aligned_cols=173 Identities=8% Similarity=0.015 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcc-CcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHH
Q psy17080 355 LIRLISFVQYIIWFSVYLVYYGLVLNL-SNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLAC 430 (565)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~ 430 (565)
.++...+..++.+......+..++.+. ++++.+. ........+..+++.+..|+++||+|||+.+.++.++.++++
T Consensus 8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~ 87 (395)
T PRK10054 8 STSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGF 87 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHH
Confidence 344445555555555444443333333 3455443 334444556777888999999999999999998888887777
Q ss_pred HHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhHHHH
Q psy17080 431 LMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL-WHMQSINIHFPMGL 509 (565)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i-~~~~~~~~~~~~~~ 509 (565)
+++. +.++.+..++...+.+.+.+...+....+..|..|++.|+++.|+.+....+|.+++|.+ ..+...++..+|.+
T Consensus 88 ~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~ 166 (395)
T PRK10054 88 IAIP-LVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWL 166 (395)
T ss_pred HHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHH
Confidence 7666 555544444444455555555567788889999999999999999999999999999988 32334577888888
Q ss_pred HHHHHHHHHHHH-hhcccCC
Q psy17080 510 LGVVGVLGGLSV-LLLPDTT 528 (565)
Q Consensus 510 ~~~~~~i~~~~~-~~l~et~ 528 (565)
.+++.+++.++. +++|+.+
T Consensus 167 ~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 167 AAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHHhccc
Confidence 877777765544 4466554
No 136
>PRK03545 putative arabinose transporter; Provisional
Probab=99.09 E-value=1.1e-08 Score=104.28 Aligned_cols=146 Identities=14% Similarity=-0.004 Sum_probs=111.7
Q ss_pred cCcCCCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHH
Q psy17080 381 LSNIGGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSS 457 (565)
Q Consensus 381 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (565)
.++++.+.. .......+...++.+..+.+.||+|||+++..+.++.+++.+... +.++.+...+..++.+++.+..
T Consensus 36 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~~~G~~~~~~ 114 (390)
T PRK03545 36 AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSA-LAWNFTVLLISRIGIAFAHAIF 114 (390)
T ss_pred HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHH
Confidence 445554443 333344555667788889999999999999999998888887776 6666666666666777777777
Q ss_pred HHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHhhhhhHHHHHHHHHHHHHHHH-hhcccC
Q psy17080 458 NVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQSINIHFPMGLLGVVGVLGGLSV-LLLPDT 527 (565)
Q Consensus 458 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~~~~~~~~~~~~~~~i~~~~~-~~l~et 527 (565)
.+....+..|.+|++.|+++.|+......+|..++|.+. ..+..+++..|++.+++.++..+.. ..+|+.
T Consensus 115 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 115 WSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 788889999999999999999999999999999999883 3456688888988888777665543 445654
No 137
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.09 E-value=2.3e-09 Score=110.34 Aligned_cols=180 Identities=16% Similarity=0.187 Sum_probs=123.1
Q ss_pred hccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHH
Q psy17080 349 DLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLG 425 (565)
Q Consensus 349 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~ 425 (565)
.+.+++.++...+...+..+.........+....+.+.+. ........+..+++.++.|++.||+|||+.+..+..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~ 91 (417)
T PRK10489 12 LLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGT 91 (417)
T ss_pred HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHH
Confidence 3445666666666555555554444444444444444333 3444555677788889999999999999988887776
Q ss_pred HHHHHHHHhh--c--CCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHH
Q psy17080 426 AGLACLMTLG--F--APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQ 499 (565)
Q Consensus 426 ~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~ 499 (565)
.+++.+.+.. + .++.+...+..++.+++.+...+....+..|..|++.|+++.++.++...+|..++|.+ ...+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~ 171 (417)
T PRK10489 92 CGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA 171 (417)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH
Confidence 6665544321 1 22334445555666777776777788889999999999999999999999999999988 3345
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHhhcccCC
Q psy17080 500 SINIHFPMGLLGVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 500 ~~~~~~~~~~~~~~~~i~~~~~~~l~et~ 528 (565)
..++...+.+.++..+++.++.+.+|+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 200 (417)
T PRK10489 172 AGGVAWNYGLAAAGTFITLLPLLRLPALP 200 (417)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 56677777777777666666666777654
No 138
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.08 E-value=4.3e-09 Score=89.85 Aligned_cols=131 Identities=18% Similarity=0.209 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhh
Q psy17080 395 SGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMR 474 (565)
Q Consensus 395 ~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 474 (565)
.+++.+++.++.+++.||+|||+.+..+..+..++.+... ...+.+...+..++.+++.+...+....+..|.+|++.|
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFA-LSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 3566778899999999999999999988888877777665 445556666667778888888888889999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHh-hccc
Q psy17080 475 NLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVL-LLPD 526 (565)
Q Consensus 475 ~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~-~l~e 526 (565)
+++.++.++...+|..++|.+ ...+..++...+.+.+++.+++.+... +.||
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999988 333445666777777777766665543 4454
No 139
>TIGR00895 2A0115 benzoate transport.
Probab=99.08 E-value=1.4e-09 Score=111.05 Aligned_cols=152 Identities=14% Similarity=0.065 Sum_probs=114.0
Q ss_pred hhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHH
Q psy17080 377 LVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFA 453 (565)
Q Consensus 377 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (565)
.+...++++.+. ........++.+++.++.+++.||+|||+.+..+.++.+++.++.. +.++.+...+..++.+++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~ 118 (398)
T TIGR00895 40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCA-LATNVTQLLILRFLAGLG 118 (398)
T ss_pred HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HccchHHHHHHHHHHhcc
Confidence 334444455443 3344455667788899999999999999999999888888777766 555656666667777888
Q ss_pred HHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHhhhhhHHHHHHHHHHHHHH-HHhhcccCCC
Q psy17080 454 ISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQSINIHFPMGLLGVVGVLGGL-SVLLLPDTTG 529 (565)
Q Consensus 454 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~~~~~~~~~~~~~~~i~~~-~~~~l~et~~ 529 (565)
.+...+...++..|.+|++.|+++.|+.+....+|..++|.+. ..+..++...+.+.+++.++..+ ...++||+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 119 LGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESID 197 (398)
T ss_pred cccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence 8888889999999999999999999999999999999999883 34556777777777655554443 4466777644
No 140
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.08 E-value=2.9e-08 Score=95.28 Aligned_cols=146 Identities=16% Similarity=0.072 Sum_probs=100.3
Q ss_pred eccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhh
Q psy17080 145 SEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVS 224 (565)
Q Consensus 145 ~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 224 (565)
+++++ +..+++.+....+...++..++.|.++||+|||+.-+...++.+++++ +-.+++++.++++|++.|++...
T Consensus 62 ~~yg~---~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSL 137 (354)
T PF05631_consen 62 ESYGF---SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSL 137 (354)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHH
Confidence 45777 778889999999999999999999999999999999999999998886 45568999999999999999998
Q ss_pred hHhhhhhhh-cccc----ccchhHHHHHHhh-hhhHHHHHHHHHHHHHhc-----chhHHHHHHHHHHHHHHHHh-hhcc
Q psy17080 225 IVFSGFVLC-MELV----GGKWLTIMGVMYL-FPVPVGYIAISGIAYYSH-----NWRLLQWVITIPTIFFLTLW-WIMP 292 (565)
Q Consensus 225 ~~~~~~~~i-~e~~----~~~~r~~~~~~~~-~~~~lG~~~~~~l~~~~~-----~Wr~~~~~~~~~~~~~~~~~-~~~p 292 (565)
.+.+--+++ .|.- |++..+...+... ...++-.++.+.++.... +-..+|.......++..++. ..-+
T Consensus 138 LfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 138 LFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccc
Confidence 888877664 4543 2233333322222 222333344444554432 23557777655554444433 2334
Q ss_pred cc
Q psy17080 293 ES 294 (565)
Q Consensus 293 es 294 (565)
|.
T Consensus 218 EN 219 (354)
T PF05631_consen 218 EN 219 (354)
T ss_pred cc
Confidence 54
No 141
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.07 E-value=7.6e-10 Score=113.48 Aligned_cols=150 Identities=15% Similarity=0.045 Sum_probs=122.2
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|.+.++.++ +..+.++..+.+.++..++.++.|+++||+|||+.+..+.+...++.++..+.++.+.+.+.-++.|
T Consensus 243 ~p~~~~~~g~---s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (406)
T PRK11551 243 LPSLLVGQGL---SRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAG 319 (406)
T ss_pred HHHHHHhCCC---ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 4556666777 6777899999999999999999999999999999998887777777777777788888888888999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHHHHHhhhcc
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH----NWRLLQWVITIPTIFFLTLWWIMP 292 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~----~Wr~~~~~~~~~~~~~~~~~~~~p 292 (565)
++.++..+...+++.|.+|+++|++..++.+....+|..+++.++..+. +|...+++.....++..+..+++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 320 LFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9888888888999999999999999999999999999999998877652 456666665555555554444443
No 142
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.07 E-value=8.3e-09 Score=108.76 Aligned_cols=139 Identities=16% Similarity=0.118 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCc------hHHHHHHHHHHHHHHHHHHHHHHH
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPG------SFITISLAMVGKFAISSSNVIIPI 463 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 463 (565)
.......++.+++.++.+++.||+|||+.+.++.++..++.++.. +.++ .+..++..++.+++.+..++...+
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~ 138 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASG-LSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAI 138 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH-HccCcccchHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 445556677889999999999999999999998888887777665 4333 245566677888999998999999
Q ss_pred hcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH--HH-----------------------HhhhhhHHHHHHHHHHHHH
Q psy17080 464 YTAELFPTKMRNLGVGASSVPAGVALILIPYLWH--MQ-----------------------SINIHFPMGLLGVVGVLGG 518 (565)
Q Consensus 464 ~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~--~~-----------------------~~~~~~~~~~~~~~~~i~~ 518 (565)
+.+|.+|++.|+++.++.+....+|.++++.+.. .. ..+|+.++.+.++.+++..
T Consensus 139 ~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~ 218 (502)
T TIGR00887 139 ITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLAL 218 (502)
T ss_pred HHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998888877622 11 1257777776666666666
Q ss_pred HHHhhcccCCC
Q psy17080 519 LSVLLLPDTTG 529 (565)
Q Consensus 519 ~~~~~l~et~~ 529 (565)
+..+++||+.+
T Consensus 219 ~~~~~lpESpr 229 (502)
T TIGR00887 219 YFRLTIPETPR 229 (502)
T ss_pred HHHHhCCCCHH
Confidence 66688999865
No 143
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.06 E-value=5.7e-09 Score=104.56 Aligned_cols=140 Identities=17% Similarity=0.185 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17080 388 VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAE 467 (565)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 467 (565)
..+......+...++.++.|++.||+|||+.+..+.++.+++.++.. +.++.+...+..++.+++.+...+....++.|
T Consensus 34 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~ 112 (352)
T PF07690_consen 34 IGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA-FASNFWLLLIARFLLGIGSGFFSPASNALIAD 112 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh-hhhhHHHHhhhccccccccccccccccccccc
Confidence 44555666778889999999999999999999999998888855554 43555667777788889988899999999999
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHHH--HHHhhhhhHHHHHHHHHHHHHHHH-hhcccCC
Q psy17080 468 LFPTKMRNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLSV-LLLPDTT 528 (565)
Q Consensus 468 ~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~--~~~~~~~~~~~~~~~~~~i~~~~~-~~l~et~ 528 (565)
.+|++.|+++.|+.+....+|.+++|.+.. .+..++...+++.+++.++..++. +++++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 113 WFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPP 176 (352)
T ss_dssp CCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---S
T ss_pred cchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcc
Confidence 999999999999999999999999998833 345678888999988888877643 4444433
No 144
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.05 E-value=1.4e-08 Score=103.15 Aligned_cols=148 Identities=16% Similarity=0.168 Sum_probs=114.7
Q ss_pred cCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHH
Q psy17080 381 LSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSS 457 (565)
Q Consensus 381 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (565)
.++++.+. ........++..++.++.|++.||+|||+.+..+.++.+++.++.. +.++.+...+..++.+++.+..
T Consensus 32 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~ 110 (385)
T TIGR00710 32 AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLA-LSNNIETLLVLRFVQAFGASAG 110 (385)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHcchhHH
Confidence 34444433 3445556677788899999999999999999999888888887776 5566666666677788888888
Q ss_pred HHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH-hhcccCCC
Q psy17080 458 NVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSV-LLLPDTTG 529 (565)
Q Consensus 458 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~-~~l~et~~ 529 (565)
.+....+..|.+|++.|+++.|+.+....+|..++|.+ ...+..++...+.+.+++.++..+.. +..||++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 111 SVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 88889999999999999999999999999999999988 33455678888888777766665544 45676654
No 145
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.05 E-value=1.7e-08 Score=103.53 Aligned_cols=148 Identities=20% Similarity=0.129 Sum_probs=115.2
Q ss_pred cCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHH
Q psy17080 381 LSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSS 457 (565)
Q Consensus 381 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (565)
.++++.+. .+......++..++.+..+++.||+|||+.+..+.++.+++.++.. +.++.+...+.-++.+++.+..
T Consensus 35 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~ 113 (412)
T TIGR02332 35 GKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATM-FATGPESLYLLRILVGIAEAGF 113 (412)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHhhH
Confidence 34555443 3444455566778889999999999999999999999888888877 6666666677777888888888
Q ss_pred HHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH-H-H------HhhhhhHHHHHHHHHHHHHH-HHhhcccCC
Q psy17080 458 NVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH-M-Q------SINIHFPMGLLGVVGVLGGL-SVLLLPDTT 528 (565)
Q Consensus 458 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~-~-~------~~~~~~~~~~~~~~~~i~~~-~~~~l~et~ 528 (565)
.+....++.|.+|++.|+++.|+.+....+|.+++|.+.. . . ..+++..|.+.++..++..+ ..+++||++
T Consensus 114 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 114 LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 8888899999999999999999999999999999988832 2 1 24788888888777765544 446678876
Q ss_pred C
Q psy17080 529 G 529 (565)
Q Consensus 529 ~ 529 (565)
+
T Consensus 194 ~ 194 (412)
T TIGR02332 194 D 194 (412)
T ss_pred c
Confidence 4
No 146
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.04 E-value=2.5e-08 Score=101.57 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF 469 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 469 (565)
.......+...++.++.+.+.||+|||+.+..+.++.+++.++.. +.++.+..++..++.+++.+...+....++.|.+
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 137 (394)
T PRK10213 59 QSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVS-FANSFSLLLIGRACLGLALGGFWAMSASLTMRLV 137 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHH-HHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHc
Confidence 334455667778899999999999999999999999988887776 5566677777778888888888899999999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH-hhcccCC
Q psy17080 470 PTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSV-LLLPDTT 528 (565)
Q Consensus 470 p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~-~~l~et~ 528 (565)
|++.|+.+.++......+|..++|.+ ...+..++...|.+.+++.++..+.. ..+||++
T Consensus 138 ~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 138 PPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999988 33455678888888776666554433 3456643
No 147
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.03 E-value=1.8e-08 Score=102.82 Aligned_cols=152 Identities=14% Similarity=0.060 Sum_probs=112.6
Q ss_pred hhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHH
Q psy17080 377 LVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFA 453 (565)
Q Consensus 377 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (565)
.+...++++.+. ........+...++.++.|+++||+|||+.+..+.++.+++.++.. ..++.+...+..++.+++
T Consensus 26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~l~g~~ 104 (392)
T PRK10473 26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS-LAETSSLFLAGRFLQGIG 104 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhh
Confidence 333344444443 2344455566778889999999999999999999888888877776 555555555566677777
Q ss_pred HHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH--HHHhhhhhHHHHHHHHHHHHHHH-HhhcccCCC
Q psy17080 454 ISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH--MQSINIHFPMGLLGVVGVLGGLS-VLLLPDTTG 529 (565)
Q Consensus 454 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~--~~~~~~~~~~~~~~~~~~i~~~~-~~~l~et~~ 529 (565)
.+...+....+..|.+|++.|+++.++.+....++..++|.+.. .+..++...+.+.+++.++..++ .+.+||++.
T Consensus 105 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 105 AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRP 183 (392)
T ss_pred hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 77777888899999999999999999999999999999998832 34567777788877776666554 356677644
No 148
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.03 E-value=1e-09 Score=111.08 Aligned_cols=141 Identities=17% Similarity=0.022 Sum_probs=117.4
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchh--HHHHHHHHHH
Q psy17080 141 HTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWF--ELYLVVRFFL 218 (565)
Q Consensus 141 ~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~--~~l~~~r~l~ 218 (565)
+...+++++ +..+.++..+.+.++..++.++.|+++||+|||+.+..+.++.+++.++..+.++. ..+++..++.
T Consensus 229 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 229 KPYGQSLGL---SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 334466676 66678889999999999999999999999999999999999888888887777643 3345667888
Q ss_pred hhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHH
Q psy17080 219 GFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFF 284 (565)
Q Consensus 219 G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~ 284 (565)
|++.+...+....++.|.+|+++|++..++.+....+|..+++.+...+ .+|++.|++.++..++.
T Consensus 306 g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 306 FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 9888888888888999999999999999999999999999999877654 47999988877766554
No 149
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.03 E-value=2.5e-09 Score=108.32 Aligned_cols=146 Identities=14% Similarity=0.174 Sum_probs=117.8
Q ss_pred eeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhh
Q psy17080 144 ISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCV 223 (565)
Q Consensus 144 ~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 223 (565)
.++++. +..+.+++.+.......++.++.|++.||+|||+++..+.++..+..++..+.++.+.+++.+++.|++.+
T Consensus 227 ~~~~g~---~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 303 (375)
T TIGR00899 227 IHELGL---PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIG 303 (375)
T ss_pred HHHcCC---CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677 66777888877777778889999999999999999988877766666666677788888889999999988
Q ss_pred hhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhhccc
Q psy17080 224 SIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWIMPE 293 (565)
Q Consensus 224 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~~pe 293 (565)
...+....++.|..|+ +++.+.++.+....+|..+++.++..+ .+|+..+++.++..++..+..++++|
T Consensus 304 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 304 ILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 8888888889998875 567888998888889998888877654 37999999888877777666655543
No 150
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.03 E-value=1.3e-08 Score=103.52 Aligned_cols=170 Identities=12% Similarity=0.037 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHH
Q psy17080 355 LIRLISFVQYIIWFSVYLVYYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACL 431 (565)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~ 431 (565)
.++...+..++..+..............+.+.+. .+......+...+..++.|++.||+|||+++.++.++.+++.+
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~ 83 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCL 83 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHH
Confidence 4444444444444433333222222233444332 3344455567778889999999999999999999988877766
Q ss_pred HHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH-HHHHhhhhhHHHHH
Q psy17080 432 MTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW-HMQSINIHFPMGLL 510 (565)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~-~~~~~~~~~~~~~~ 510 (565)
... +..+. .+..++.+++.+...|...+++.|.+|++.|+++.|+.++...+|.+++|.+. .+.+..+..++.+.
T Consensus 84 ~~~-~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~ 159 (393)
T PRK11195 84 LML-FGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVC 159 (393)
T ss_pred HHH-HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554 32222 34455678888888999999999999999999999999999999999999982 22233344455555
Q ss_pred HHHHHHHHHHHhhcccCC
Q psy17080 511 GVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 511 ~~~~~i~~~~~~~l~et~ 528 (565)
+.+.+++.+..+.+||.+
T Consensus 160 ~~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 160 ALIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHhcCCCCc
Confidence 544444545556677754
No 151
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.02 E-value=8.9e-10 Score=114.39 Aligned_cols=144 Identities=12% Similarity=0.045 Sum_probs=116.0
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccc--cchhhHHH--HHHHHHHHHHHHHhcchhHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKF--GRKKALMG--SLVFQLVLGVLVAISPWFELYLVVR 215 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~--Grr~~l~~--~~~l~~~~~~~~~~~~~~~~l~~~r 215 (565)
.+...+++++ +..+.+++.++..++..++.++.|+++||. ++|+...+ +.++.+++.++..+.++++.+++.+
T Consensus 264 l~~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~ 340 (455)
T TIGR00892 264 LVPYAKDKGV---DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYC 340 (455)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 4555567777 778889999999999999999999999984 33433333 3444455556667788999999999
Q ss_pred HHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHH
Q psy17080 216 FFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLT 286 (565)
Q Consensus 216 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~ 286 (565)
++.|++.+...+...+++.|.+|++++++..++.+....+|.+++|.++..+ .+|++.|++.++..++..+
T Consensus 341 ~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 341 IFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888764 2699999888776555443
No 152
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.02 E-value=1.5e-08 Score=104.66 Aligned_cols=138 Identities=11% Similarity=0.111 Sum_probs=105.7
Q ss_pred hhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHH
Q psy17080 374 YYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVG 450 (565)
Q Consensus 374 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (565)
.+..+...++++.+. ........++..++.++.|++.||+|||+.+..+.++.+++.++.. +.++.+...+..++.
T Consensus 38 ~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~ 116 (426)
T PRK12307 38 FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSG-LASGVIMLTLSRFIV 116 (426)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHH
Confidence 333344334444332 3444556677788899999999999999999999999988887776 556666677777788
Q ss_pred HHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHhhhhhHHHHHHH
Q psy17080 451 KFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQSINIHFPMGLLGV 512 (565)
Q Consensus 451 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~~~~~~~~~~~~ 512 (565)
+++.+..++....++.|.+|++.|+++.|+......+|.+++|.+. ..+..++...+++...
T Consensus 117 G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 117 GMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 8888888889999999999999999999999999999999988772 2344577777766443
No 153
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.02 E-value=2.6e-08 Score=102.09 Aligned_cols=138 Identities=17% Similarity=0.125 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q psy17080 391 NTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFP 470 (565)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 470 (565)
...+..++..++.++.|.++||+|||+++..+.++.+++.++.. +.++.+..++.-++.+++.+...+..+.+..|.+|
T Consensus 56 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~-~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~ 134 (413)
T PRK15403 56 SVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATL-FTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFG 134 (413)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34445567778889999999999999999999888888887776 56666666666677777766655667788899999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHH-HhhcccCCC
Q psy17080 471 TKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLS-VLLLPDTTG 529 (565)
Q Consensus 471 ~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~-~~~l~et~~ 529 (565)
++.|++++++.+....+|..++|.+ ...+..++...|++.+++.+++.+. .+.+||++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 135 QTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999999999988 3344568888898888887777654 356788754
No 154
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.02 E-value=2.7e-08 Score=97.79 Aligned_cols=137 Identities=17% Similarity=0.055 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17080 388 VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAE 467 (565)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 467 (565)
.......++++..++.++...+.+|+.||+++...+.+..++.++.. +.++.+...+.-++.++..+..+++..+.+.+
T Consensus 50 aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~a-lAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~ 128 (394)
T COG2814 50 AGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSA-LAPSFAVLLLARALAGLAHGVFWSIAAALAAR 128 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677788889999999999999999999999999999999988 88888888888899999999999999999999
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHH-Hhhcc
Q psy17080 468 LFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLS-VLLLP 525 (565)
Q Consensus 468 ~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~-~~~l~ 525 (565)
+.|+++|++++++..+...++.+++.-+ ..-+..||+..|+..+++++++.+. ...+|
T Consensus 129 lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 129 LVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999988888887655 4456789999999999999888765 46788
No 155
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.01 E-value=3.6e-08 Score=100.67 Aligned_cols=166 Identities=10% Similarity=0.067 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHhhhhhhhc-cCcCCCcHHHHHHHH---HHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc
Q psy17080 361 FVQYIIWFSVYLVYYGLVLN-LSNIGGDVYLNTIIS---GIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF 436 (565)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~ 436 (565)
...++.+......+...+.+ .+..+.+......+. .+......++.|.++||+|||+.+..+.++.+++++... +
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~-~ 95 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMA-I 95 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHH-H
Confidence 34444444444444333333 345555554444333 445556678899999999999999999999998888876 5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhHHHHHHHHHH
Q psy17080 437 APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL-WHMQSINIHFPMGLLGVVGV 515 (565)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i-~~~~~~~~~~~~~~~~~~~~ 515 (565)
.++.+...+..++.+++.+...+...+++.+.+|++.|+++.|+.+....+|..++|.+ ..+...++...|++.+++.+
T Consensus 96 ~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~ 175 (400)
T PRK11646 96 AHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFV 175 (400)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 55556666666677777777778888889999999999999999999999999999988 22335677778887777666
Q ss_pred HHHHH-HhhcccC
Q psy17080 516 LGGLS-VLLLPDT 527 (565)
Q Consensus 516 i~~~~-~~~l~et 527 (565)
+..++ .+++||.
T Consensus 176 ~~~i~~~~~~~~~ 188 (400)
T PRK11646 176 LAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHhCCcc
Confidence 65544 3455653
No 156
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.01 E-value=2.8e-08 Score=100.92 Aligned_cols=148 Identities=12% Similarity=0.029 Sum_probs=115.2
Q ss_pred ccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHH
Q psy17080 380 NLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISS 456 (565)
Q Consensus 380 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (565)
..++++.+ .........++..++.++.|++.||+|||+.+..+..+.+++.++.. +.++.+...+..++.+++.+.
T Consensus 29 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~-~~~~~~~l~~~r~l~G~~~~~ 107 (382)
T PRK10091 29 LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFT-LSSSYLMLAIGRLVSGFPHGA 107 (382)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhhHH
Confidence 34444433 33445566778889999999999999999999999999988888777 667777777777888888888
Q ss_pred HHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHH-HhhcccCC
Q psy17080 457 SNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLS-VLLLPDTT 528 (565)
Q Consensus 457 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~-~~~l~et~ 528 (565)
..+....+..|.+|++.|+.+.++......+|..++|.+ ...+..++...|.+.+++.++..+. ...+||.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 108 FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 778888888999999999999999988888999988877 3344567888888888776665543 35577754
No 157
>PRK12382 putative transporter; Provisional
Probab=99.00 E-value=3.9e-09 Score=107.62 Aligned_cols=133 Identities=16% Similarity=0.043 Sum_probs=115.0
Q ss_pred hHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccc
Q psy17080 157 ESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMEL 236 (565)
Q Consensus 157 ~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~ 236 (565)
.++..+.+.++..+++++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+...+.+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 45667778888899999999999999999999999999888888888888888888999999999998888888889999
Q ss_pred cccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhh
Q psy17080 237 VGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWW 289 (565)
Q Consensus 237 ~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~ 289 (565)
+++++|+++.++.+....+|..+++.+...+ .+|+..|++.++..++..+..+
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 331 VPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988877664 3899999988877666655543
No 158
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.99 E-value=2.1e-09 Score=104.17 Aligned_cols=144 Identities=13% Similarity=0.069 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17080 388 VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAE 467 (565)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 467 (565)
.........+..-++.++.|.++||.+.|..+..+++++++..+++. +.++.+.+.++..+-+.+.+..+|.....+..
T Consensus 66 lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~G-fs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~ 144 (448)
T COG2271 66 LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFG-FSPSLFLFAVLWVLNGWFQGMGWPPCARTITH 144 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 34555566677778999999999999999999999999999999999 77777788888889999999999999999999
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHHH----HHHhhhhhHHHHHHHHHHHHHHHH-hhcccC---CCCCc
Q psy17080 468 LFPTKMRNLGVGASSVPAGVALILIPYLWH----MQSINIHFPMGLLGVVGVLGGLSV-LLLPDT---TGLAD 532 (565)
Q Consensus 468 ~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~----~~~~~~~~~~~~~~~~~~i~~~~~-~~l~et---~~~~~ 532 (565)
-+|++.||+..++-|+..++|+.+.|.+.. ..+.++...|++-++++++.+++. +.+++| .++|+
T Consensus 145 Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ 217 (448)
T COG2271 145 WFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP 217 (448)
T ss_pred HcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC
Confidence 999999999999999999999998888742 234578889999998888776655 555544 34653
No 159
>TIGR00898 2A0119 cation transport protein.
Probab=98.99 E-value=1.1e-08 Score=108.13 Aligned_cols=139 Identities=17% Similarity=0.197 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
.+...+..++.+++.++.|+++||+|||+++.++.++.+++.++.. +.++.+...+..++.+++.+...+...+++.|.
T Consensus 130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~ 208 (505)
T TIGR00898 130 DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTA-FSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEF 208 (505)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHHhhccchHHHHHHHhhee
Confidence 4455666778889999999999999999999999988888887777 667777777778888999988899999999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYLWHMQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
+|++.|+.+.++......+|.+++|.+..... ++...+++.++..++..+..+++||+.+
T Consensus 209 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-~wr~~~~~~~i~~~~~~~~~~~~~esp~ 268 (505)
T TIGR00898 209 LPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP-DWRWLQLAVSLPTFLFFLLSWFVPESPR 268 (505)
T ss_pred cChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHhcCCChH
Confidence 99999999999998888899999988743222 3777788888777777777788888753
No 160
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.98 E-value=3.3e-09 Score=108.76 Aligned_cols=133 Identities=14% Similarity=0.094 Sum_probs=114.7
Q ss_pred hHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccc
Q psy17080 157 ESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMEL 236 (565)
Q Consensus 157 ~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~ 236 (565)
.+++.+++.++..++.++.|+++||+|||+.+..+.++..++.+...+.++.+.+++.+++.|++.+...+...+++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 46666777888889999999999999999999999888888888788888888899999999999999999999999999
Q ss_pred cccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhh
Q psy17080 237 VGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWW 289 (565)
Q Consensus 237 ~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~ 289 (565)
.++++|++..++......+|..++|.+++.+ .+|+..|++.++..++..+..+
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888899999988887765 3799999998877776655543
No 161
>KOG3626|consensus
Probab=98.97 E-value=4.1e-09 Score=110.23 Aligned_cols=267 Identities=15% Similarity=0.106 Sum_probs=179.0
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc-------------
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP------------- 206 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~------------- 206 (565)
..+|.+.|++ ++.+.|++.+.+=+|..+...+..+..-|..|-+.+-+++++++++++++++-+
T Consensus 120 IttiErRF~i---~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 120 ITTIERRFKI---SSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhhhcCC---CCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 7888999999 888899999999999999999999999999999999999999999999887630
Q ss_pred ------h--------------------------------hH-HHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHH
Q psy17080 207 ------W--------------------------------FE-LYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGV 247 (565)
Q Consensus 207 ------~--------------------------------~~-~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~ 247 (565)
+ ++ .++++.++.|+|....++...+|+-|.+.+++-....+
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlg 276 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLG 276 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHH
Confidence 0 12 56778999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHhc----------------------chhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHH
Q psy17080 248 MYLFPVPVGYIAISGIAYYSH----------------------NWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNK 305 (565)
Q Consensus 248 ~~~~~~~lG~~~~~~l~~~~~----------------------~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~ 305 (565)
+......+|+++|-+++.+.. .|..-|++.+.+.++..+.++++|...+- .++..
T Consensus 277 i~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~---~~~~~ 353 (735)
T KOG3626|consen 277 ILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPK---SQKRK 353 (735)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcc---ccccc
Confidence 999999999998888876531 25666777777777777777888765321 11110
Q ss_pred HHHHHHHHHHHHcC-CCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHH-HhhhhhhhccCc
Q psy17080 306 EAMKILGDAAKFNS-RKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVY-LVYYGLVLNLSN 383 (565)
Q Consensus 306 ~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 383 (565)
++++ .+.....++ .+......+ ..++-....+.+++||.+...++...+-..... +..|..-+...+
T Consensus 354 ~~~~-~~~~k~~~~~~~~~~~~~~----------~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Q 422 (735)
T KOG3626|consen 354 RARD-LHVLKTESGGAKSDKTFGK----------KIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQ 422 (735)
T ss_pred hhhh-hcccccccccccCCcchhh----------hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHH
Confidence 0000 000000000 000000000 001122356778888877666655544333322 222333344445
Q ss_pred CCCcHHHHHHHHHHHH----HHHHHHHHHHHhhcCC--hHHHHHHH
Q psy17080 384 IGGDVYLNTIISGIVE----FPAIVISIFILLKMGR--RRPLCLTT 423 (565)
Q Consensus 384 ~~~~~~~~~~~~~~~~----~~~~~~~~~l~dr~gr--r~~l~~~~ 423 (565)
++.+.+.+..+.+... .+|.+++|++++|+.- |....+.+
T Consensus 423 fg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~ 468 (735)
T KOG3626|consen 423 FGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVI 468 (735)
T ss_pred cCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHH
Confidence 6666666666555444 4567888999998753 44443333
No 162
>PRK10504 putative transporter; Provisional
Probab=98.97 E-value=4.2e-08 Score=102.73 Aligned_cols=155 Identities=13% Similarity=0.132 Sum_probs=115.0
Q ss_pred HhhhhhhhccCcCCCcHH---HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHH
Q psy17080 372 LVYYGLVLNLSNIGGDVY---LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAM 448 (565)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (565)
......+...++++.+.. .......+...++.++.|++.||+|||+.+..+..+.+++.++.. +.++.+..++..+
T Consensus 28 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 106 (471)
T PRK10504 28 IVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCA-LSGTLNELLLARV 106 (471)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHH
Confidence 333344445555665543 333444566678889999999999999999988888777776665 5566566667777
Q ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH-hhcc
Q psy17080 449 VGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSV-LLLP 525 (565)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~-~~l~ 525 (565)
+.+++.+...+....++.|.+|++.|+++.|+.+....+|..++|.+ ...+..++...|.+...+..++.++. ...|
T Consensus 107 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 107 LQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 88888888888889999999999999999999999999999999988 33455677888888776666665544 3444
Q ss_pred cC
Q psy17080 526 DT 527 (565)
Q Consensus 526 et 527 (565)
+.
T Consensus 187 ~~ 188 (471)
T PRK10504 187 NY 188 (471)
T ss_pred Cc
Confidence 43
No 163
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.97 E-value=2.2e-08 Score=105.25 Aligned_cols=153 Identities=16% Similarity=0.215 Sum_probs=118.4
Q ss_pred hhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHH
Q psy17080 376 GLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKF 452 (565)
Q Consensus 376 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (565)
..+...++++.+ ..+......++.+++.++.+++.||+|||+.+..+.++.+++.++.. ..++.+..++..++.++
T Consensus 24 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~G~ 102 (485)
T TIGR00711 24 AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG-VAPNLELMIIFRVIQGF 102 (485)
T ss_pred HHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh-CcCCHHHHHHHHHHHHh
Confidence 344444444433 34555667778888999999999999999999999999888888777 66666677777778888
Q ss_pred HHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH-hhcccCCC
Q psy17080 453 AISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSV-LLLPDTTG 529 (565)
Q Consensus 453 ~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~-~~l~et~~ 529 (565)
+.+...+....++.|.+|++.|+++.++..+...+|..++|.+ ...+..++...|++.+.+.++..++. +++||+++
T Consensus 103 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 103 GGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred hhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 8888888999999999999999999999999999999999988 33455677778887777666655544 45666443
No 164
>PRK03699 putative transporter; Provisional
Probab=98.95 E-value=2.7e-08 Score=101.44 Aligned_cols=132 Identities=14% Similarity=0.045 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF 469 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 469 (565)
.......++..++.++.+++.||+|||+.+..+.++.+++.++.. +.++.+...+..++.+++.+...+....++.|.+
T Consensus 46 ~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~-~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~ 124 (394)
T PRK03699 46 NTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLM-FSHSLALFSIAMFVLGVVSGITMSIGTFLITHVY 124 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HcchHHHHHHHHHHHHHhhHhhccchhHHhhhhc
Confidence 344455667788899999999999999999998888888877776 5555566666667778877777778888899999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHH--HHH-HhhhhhHHHHHHHHHHHHHHHHh
Q psy17080 470 PTKMRNLGVGASSVPAGVALILIPYLW--HMQ-SINIHFPMGLLGVVGVLGGLSVL 522 (565)
Q Consensus 470 p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~-~~~~~~~~~~~~~~~~i~~~~~~ 522 (565)
|++.|+.+.++.+....+|+.++|.+. ... ..+++..|.+.+++.++..++.+
T Consensus 125 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 125 EGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998888888888888772 222 35788888887777666554443
No 165
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.95 E-value=4.2e-08 Score=102.97 Aligned_cols=141 Identities=12% Similarity=0.139 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc--------CCch---HHHHHHHHHHHHHHHHH
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF--------APGS---FITISLAMVGKFAISSS 457 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~~~~ 457 (565)
.+......++.+++.++.|++.||+|||+++.++.++.+++.+..... .++. ...++.-++.+++.+..
T Consensus 58 ~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~ 137 (479)
T PRK10077 58 GFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLA 137 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHH
Confidence 345556667888999999999999999999999888877766655410 0111 23345567788899999
Q ss_pred HHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH-H---------HHhhhhhHHHHHHHHHHHHHHHHhhcccC
Q psy17080 458 NVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH-M---------QSINIHFPMGLLGVVGVLGGLSVLLLPDT 527 (565)
Q Consensus 458 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~-~---------~~~~~~~~~~~~~~~~~i~~~~~~~l~et 527 (565)
.+...++++|.+|++.|+.++|+.+....+|.++++.+.. . ...+|+..|++.++..++..+..+++||+
T Consensus 138 ~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s 217 (479)
T PRK10077 138 SMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPET 217 (479)
T ss_pred hhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999988899888876621 1 23578888888877777766666788887
Q ss_pred CC
Q psy17080 528 TG 529 (565)
Q Consensus 528 ~~ 529 (565)
.+
T Consensus 218 ~~ 219 (479)
T PRK10077 218 PR 219 (479)
T ss_pred cH
Confidence 53
No 166
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.94 E-value=8e-09 Score=107.84 Aligned_cols=147 Identities=16% Similarity=0.114 Sum_probs=105.9
Q ss_pred ccce-eeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHH--HHHhcchhHHHHHHHH
Q psy17080 140 GHTI-ISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGV--LVAISPWFELYLVVRF 216 (565)
Q Consensus 140 ~~~i-~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~--~~~~~~~~~~l~~~r~ 216 (565)
.|.. .+++++ +..+.++..+.+.++..++.++.|+++||+|||+.+.....+..++.. .....++.+.+.+.++
T Consensus 281 ~p~yl~~~~g~---s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (467)
T PRK09556 281 SPVYAFQELGF---SKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLF 357 (467)
T ss_pred HHHHHHHccCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 4544 456888 777889999999999999999999999999999877665544443322 2234456667778888
Q ss_pred HHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHH-HHHHHHHHHHHh---------------cchhHHHHHHHHH
Q psy17080 217 FLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPV-GYIAISGIAYYS---------------HNWRLLQWVITIP 280 (565)
Q Consensus 217 l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~l-G~~~~~~l~~~~---------------~~Wr~~~~~~~~~ 280 (565)
+.|++..+..........|.+|++.|+.+.++.+....+ |..+++.+.+.+ .+|+..|++..+.
T Consensus 358 ~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~ 437 (467)
T PRK09556 358 ALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIA 437 (467)
T ss_pred HHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHH
Confidence 888765444444446677999999999999999877775 656666554433 2599999887666
Q ss_pred HHHHHHHhh
Q psy17080 281 TIFFLTLWW 289 (565)
Q Consensus 281 ~~~~~~~~~ 289 (565)
.++..+..+
T Consensus 438 ~~~~~~~~~ 446 (467)
T PRK09556 438 AIGCICLMA 446 (467)
T ss_pred HHHHHHHHH
Confidence 666555444
No 167
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.94 E-value=3.8e-08 Score=101.71 Aligned_cols=132 Identities=13% Similarity=0.077 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCch--------HHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17080 396 GIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGS--------FITISLAMVGKFAISSSNVIIPIYTAE 467 (565)
Q Consensus 396 ~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~e 467 (565)
.++..++.++.|++.||+|||+.+..+.++.+++.++.. +.++. ....+.-++.|++.+..++...+++.|
T Consensus 73 ~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e 151 (432)
T PRK10406 73 FLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIA-CLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSE 151 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHh-hcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHH
Confidence 344558899999999999999999999999998888877 44432 234555667888888889999999999
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHH-HH---------HHhhhhhHHHHHHHHHHHHHHHHhhcccCC
Q psy17080 468 LFPTKMRNLGVGASSVPAGVALILIPYLW-HM---------QSINIHFPMGLLGVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 468 ~~p~~~r~~~~g~~~~~~~lg~~i~p~i~-~~---------~~~~~~~~~~~~~~~~~i~~~~~~~l~et~ 528 (565)
.+|++.|+...++.......|.++++.+. .. ...+|+.+|.+.++..++...+...+||++
T Consensus 152 ~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~ 222 (432)
T PRK10406 152 VAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETS 222 (432)
T ss_pred hCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 99999999999988777777777766551 11 246788888887776665544444455543
No 168
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.94 E-value=4.6e-09 Score=106.29 Aligned_cols=139 Identities=14% Similarity=0.036 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
........++..++.++.|+++||+|||+.+..+.++.+++.++.. +.++.+...+..++.+++.+...+...+++.|.
T Consensus 33 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 111 (379)
T TIGR00881 33 GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFG-FSTSLWVMAALWALNGIFQGMGWPPCGRTVTKW 111 (379)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhhccccCCchHHHHHHh
Confidence 4455566677888999999999999999999999988888888777 556666666677777888888888889999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHH-H--HHHHHhhhhhHHHHHHHHHHHHHHH-HhhcccCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPY-L--WHMQSINIHFPMGLLGVVGVLGGLS-VLLLPDTT 528 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~-i--~~~~~~~~~~~~~~~~~~~~i~~~~-~~~l~et~ 528 (565)
+|++.|+.+.++.+....+|..++|. + ......++...+.+.+++.++..++ .++.||++
T Consensus 112 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 112 FSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred cCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence 99999999999999999999999994 4 2234456777777777766655444 34556554
No 169
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.93 E-value=5.8e-08 Score=102.35 Aligned_cols=137 Identities=13% Similarity=0.073 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF 469 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 469 (565)
.......++..++.++.|++.||+|||+.+..+.++.+++.++.. +.++.+...+..++.+++.+..++....++.|.+
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~ 137 (496)
T PRK03893 59 SLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACG-FAPGYWTLFIARLVIGMGMAGEYGSSATYVIESW 137 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344455567778899999999999999999999888888887777 5555566666777788888888888889999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhcccC
Q psy17080 470 PTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLPDT 527 (565)
Q Consensus 470 p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et 527 (565)
|++.|+.+.++.+....+|..++|.+ ...+..++...+.+..+..++..+....+||+
T Consensus 138 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~ 197 (496)
T PRK03893 138 PKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEA 197 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999988 33445567766665433333332233445554
No 170
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.93 E-value=9e-08 Score=100.64 Aligned_cols=153 Identities=14% Similarity=0.031 Sum_probs=114.1
Q ss_pred hhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHH
Q psy17080 375 YGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGK 451 (565)
Q Consensus 375 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (565)
...+....+++.+ ..+......++...+.+..|+++||+|||+.+..+.++.+++.++.. +.++.+..++.-++.+
T Consensus 27 ~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~-~a~~~~~li~~r~l~G 105 (495)
T PRK14995 27 VAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAA-FSPTASWLIATRALLA 105 (495)
T ss_pred HHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHH
Confidence 3344444445433 33444455666677888999999999999999999999998888877 6677777777777788
Q ss_pred HHHHHHHHHHHHhccccc-chhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH-hhcccC
Q psy17080 452 FAISSSNVIIPIYTAELF-PTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSV-LLLPDT 527 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~-p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~-~~l~et 527 (565)
++.+...+.......+.+ |++.|+++.|+......+|..++|.+ ...+..+|++.|++...+.++..++. +++|+.
T Consensus 106 ~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 106 IGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 888877777666665654 77899999999999999999999998 34456788888888776666655543 556664
Q ss_pred C
Q psy17080 528 T 528 (565)
Q Consensus 528 ~ 528 (565)
+
T Consensus 186 ~ 186 (495)
T PRK14995 186 A 186 (495)
T ss_pred C
Confidence 3
No 171
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.93 E-value=6.6e-08 Score=99.11 Aligned_cols=139 Identities=14% Similarity=0.014 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF 469 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 469 (565)
.......++..++.++.|.+.||+|||+.+..+..+.+++.+... +.++.+..++..++.+++.+...+.......|.+
T Consensus 52 ~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~ 130 (406)
T PRK15402 52 TSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAIL-LAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESF 130 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHh
Confidence 334455667778889999999999999999998888888877766 5555566666666777777777778888899999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH-hhcccCCC
Q psy17080 470 PTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSV-LLLPDTTG 529 (565)
Q Consensus 470 p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~-~~l~et~~ 529 (565)
|++.|..+.++......++..++|.+ ...+..++...+++.+++.+++.+.. ...||++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 131 EEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 99999999998888888888888887 23345678888888777777665543 45677654
No 172
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.93 E-value=3e-08 Score=103.37 Aligned_cols=136 Identities=11% Similarity=0.045 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-cCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLK-MGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAE 467 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 467 (565)
........+...++.+++|+++|| +|||+.+.++.++.+++.+++. +.++.+...+..++.+++.+...+...++.++
T Consensus 51 g~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~ 129 (475)
T TIGR00924 51 FIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLA-MSIYPDLIFYGLGTIAVGSGLFKANPSSMVGK 129 (475)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHH-hcccHhHHHHHHHHHHhccccccCCHHHHHHH
Confidence 344555667778899999999999 8999999999999998888777 55554444455556677777777888888899
Q ss_pred ccchhh---hhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhcc
Q psy17080 468 LFPTKM---RNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLP 525 (565)
Q Consensus 468 ~~p~~~---r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~ 525 (565)
.+|++. |+.+.++.+...++|.+++|.+ ...+..++...|.+.++..+++.+..++.+
T Consensus 130 ~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 130 LYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred hcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 998754 8889999999999999999988 334556788888887766666555544444
No 173
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.92 E-value=5.2e-08 Score=101.96 Aligned_cols=141 Identities=15% Similarity=0.184 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCc--hHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy17080 388 VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPG--SFITISLAMVGKFAISSSNVIIPIYT 465 (565)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (565)
.........++..++.++.|++.||+|||+.+..+.++.+++.++....... .+..++..++.+++.+...+....++
T Consensus 73 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 152 (481)
T TIGR00879 73 WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYL 152 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHH
Confidence 3455566677888999999999999999999999988888877776522222 23566667788888888888899999
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHHHH---HH--HHhhhhhHHHHHHHHHHHHHHHHhhcccCC
Q psy17080 466 AELFPTKMRNLGVGASSVPAGVALILIPYLW---HM--QSINIHFPMGLLGVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 466 ~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~---~~--~~~~~~~~~~~~~~~~~i~~~~~~~l~et~ 528 (565)
.|.+|++.|+.+.++.+....+|.+++|.+. .. ...+++..|++.++..++..+..+++||+.
T Consensus 153 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~ 220 (481)
T TIGR00879 153 SEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESP 220 (481)
T ss_pred HccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999999999999999886 22 345677788886666666666667788864
No 174
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.92 E-value=1.2e-08 Score=103.53 Aligned_cols=145 Identities=14% Similarity=0.128 Sum_probs=114.3
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.|...++.+. +....++..+.+.++..+++++.|++.||+|||+++..+..+..++.+... + ...+...+++.|
T Consensus 223 lp~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g 296 (381)
T PRK03633 223 MPLYLNHQGM---SDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILG 296 (381)
T ss_pred HHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHH
Confidence 4555566676 667788899999999999999999999999999999888888777665443 2 234455778888
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhhh
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWWI 290 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~~ 290 (565)
++.....|...+++.|..|+++++...+....++.+|.+++|.+++.+ .+|++.|++.+...++..+..+.
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 887788899999999999988888777887788899999999887765 47889998887777665555443
No 175
>KOG2615|consensus
Probab=98.91 E-value=5e-09 Score=99.81 Aligned_cols=139 Identities=17% Similarity=0.196 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
+.....+++..++.++..|.++||+|||.++.++.+..++..++.+ ...+...++..-+++|..-+. .++..++++|+
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~-~S~~F~afv~aR~l~Gi~kgn-l~v~rAiisdV 148 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWA-LSRNFAAFVLARFLGGIFKGN-LSVIRAIISDV 148 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhccCc-hHHHHHHHHhh
Confidence 3445567788899999999999999999999999999888766666 444332222224555555544 47888999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHH-HHHHH---hh----hhhHHHHHHHHHHH-HHHHHhhcccCCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYL-WHMQS---IN----IHFPMGLLGVVGVL-GGLSVLLLPDTTG 529 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i-~~~~~---~~----~~~~~~~~~~~~~i-~~~~~~~l~et~~ 529 (565)
++++.|+.+++..++..++|.++||.+ ..+.. .. +..|-++..+++.. ..+..+++|||..
T Consensus 149 ~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 149 VSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred cChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 999999999999999999999999999 22222 11 22222222233333 2334588999966
No 176
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.91 E-value=1e-07 Score=99.04 Aligned_cols=140 Identities=13% Similarity=-0.040 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC----chHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP----GSFITISLAMVGKFAISSSNVIIPIY 464 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (565)
........++..++.++.|++.||+|||+++.++.++.+++.++.. +.+ +.+..++..++.+++.+..++.....
T Consensus 66 g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~ 144 (452)
T PRK11273 66 GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMG-FVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRT 144 (452)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHH-hhhcccccHHHHHHHHHHHHHHHhccchHHHHH
Confidence 3444556677788899999999999999999999988888877666 322 23344555566677777777777777
Q ss_pred cccccchhhhhhHHHHHHHHHHHHH-HHHHHHH--HHHHhhhhhHHHHHHHHHHHHHH-HHhhcccCCC
Q psy17080 465 TAELFPTKMRNLGVGASSVPAGVAL-ILIPYLW--HMQSINIHFPMGLLGVVGVLGGL-SVLLLPDTTG 529 (565)
Q Consensus 465 ~~e~~p~~~r~~~~g~~~~~~~lg~-~i~p~i~--~~~~~~~~~~~~~~~~~~~i~~~-~~~~l~et~~ 529 (565)
+.|.+|++.|+++.|+.+....+|+ +.+|.+. .....+|...|++.+++.++..+ ..+++||+.+
T Consensus 145 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 145 MVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred HHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHh
Confidence 8899999999999999988888886 4556542 22234677788887776666544 4466777543
No 177
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.90 E-value=2e-07 Score=97.40 Aligned_cols=134 Identities=13% Similarity=0.060 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q psy17080 391 NTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFP 470 (565)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 470 (565)
......++..++.++.|++.||+|||+++..+.++.+++.++.. +.++.+...+..++.+++.+.. .....+++|.+|
T Consensus 76 ~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~-~~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~ 153 (476)
T PLN00028 76 AGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMS-LVSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFN 153 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcC
Confidence 34445566778889999999999999999988888887777666 5555555555555666666543 334567889999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHH----H-HH------HhhhhhHHHHHHHHHHHHHHHHhhccc
Q psy17080 471 TKMRNLGVGASSVPAGVALILIPYLW----H-MQ------SINIHFPMGLLGVVGVLGGLSVLLLPD 526 (565)
Q Consensus 471 ~~~r~~~~g~~~~~~~lg~~i~p~i~----~-~~------~~~~~~~~~~~~~~~~i~~~~~~~l~e 526 (565)
++.|+.+.|+.+....+|..+++.+. . .. ..+|+..|.+.+++.++..++.+++++
T Consensus 154 ~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 154 GKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred hhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999877777766665441 1 11 136888899888888776666555544
No 178
>PRK09952 shikimate transporter; Provisional
Probab=98.90 E-value=2.1e-08 Score=103.73 Aligned_cols=147 Identities=11% Similarity=0.038 Sum_probs=103.6
Q ss_pred eccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHh---c-chhHHHHHHHHHHhh
Q psy17080 145 SEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAI---S-PWFELYLVVRFFLGF 220 (565)
Q Consensus 145 ~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~---~-~~~~~l~~~r~l~G~ 220 (565)
+++++ +......+.....+...++.++.|+++||+|||++++.+.++..++.+.... . ++.+.+++..++.|+
T Consensus 279 ~~~g~---s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 279 QNLGL---PRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 44565 4333344445556667788899999999999999988887766555433322 2 234455556677788
Q ss_pred hhhhhHhhhhhhhccccccchhHHHHHHh-hhhhHHHHHHHHHHHHHh-----cchhHHHHHHHHHHHHHHHHhhhcccc
Q psy17080 221 FCVSIVFSGFVLCMELVGGKWLTIMGVMY-LFPVPVGYIAISGIAYYS-----HNWRLLQWVITIPTIFFLTLWWIMPES 294 (565)
Q Consensus 221 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~-~~~~~lG~~~~~~l~~~~-----~~Wr~~~~~~~~~~~~~~~~~~~~pes 294 (565)
+.+...+...+++.|.+|++.|+...++. ..+..+|..++|.+...+ .+|+..+...++..++..+..+.++|+
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 88888888899999999999998877774 444557777777766553 248888887777777776666666664
No 179
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.90 E-value=8.8e-08 Score=99.87 Aligned_cols=178 Identities=15% Similarity=0.127 Sum_probs=130.3
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCCCcHHHHHHH---HHHHHHHHHHHHHHHHhhcCChHHHHHHHH
Q psy17080 348 MDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIGGDVYLNTII---SGIVEFPAIVISIFILLKMGRRRPLCLTTL 424 (565)
Q Consensus 348 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~dr~grr~~l~~~~~ 424 (565)
...+|+|.++.+.+...+..++..+........+.+...+.....++ ..+-.++..+++|.++||++||++++.+-+
T Consensus 4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~ 83 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQL 83 (524)
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHH
Confidence 34578999998888888777777666666655555555555444333 334455677889999999999999998887
Q ss_pred HHHHHHHHHhhc----CCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHH
Q psy17080 425 GAGLACLMTLGF----APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHM 498 (565)
Q Consensus 425 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~ 498 (565)
+.++..+++..+ ..+.+..+++.++.+++.....|...+.+.|+.|++....+.++.++..++..++||.+ ..+
T Consensus 84 ~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv 163 (524)
T PF05977_consen 84 LRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILV 163 (524)
T ss_pred HHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 766554443322 12346677777888888888899999999999999999999999999999999999988 344
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHhhcc
Q psy17080 499 QSINIHFPMGLLGVVGVLGGLSVLLLP 525 (565)
Q Consensus 499 ~~~~~~~~~~~~~~~~~i~~~~~~~l~ 525 (565)
...|....|.+-++..++..++....+
T Consensus 164 a~~G~~~~f~inalsfl~~i~~l~~~~ 190 (524)
T PF05977_consen 164 AFFGAAAAFLINALSFLISILALLRWK 190 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 556777778777776666555444443
No 180
>PRK11043 putative transporter; Provisional
Probab=98.90 E-value=1.7e-07 Score=95.98 Aligned_cols=139 Identities=16% Similarity=0.095 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
.....+..++..++.++.|++.||+|||+.+..+..+.+++.++.. +.++.+...+..++.+++.+...+....+..|.
T Consensus 44 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~ 122 (401)
T PRK11043 44 SASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGML-WVESAAQLLVLRFVQAVGVCSAAVIWQALVIDR 122 (401)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3444455667778999999999999999999998888887777766 555555555556666676666666667888999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhcccCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et~ 528 (565)
+|++.++...+..+....++..++|.+ ...+..++...+.+.+++.++..+..++++|.+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 123 YPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999988888888888888888899887 334556788888888877777666665565543
No 181
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.89 E-value=8.3e-08 Score=96.49 Aligned_cols=139 Identities=12% Similarity=-0.046 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
........++..++.+..|++.||+|||+++.........+..... ..++.....+.-++.+++.+. ........+|.
T Consensus 29 g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~ 106 (368)
T TIGR00903 29 GLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLL-DPFNYEWLLACQLLAALGQPF-LLNAFAPAASQ 106 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHH
Confidence 3444455667778899999999999999876655444434332222 224445666666777777765 34555566899
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHH-HhhcccCCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLS-VLLLPDTTG 529 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~-~~~l~et~~ 529 (565)
+|++.|++++++.+....+|..++|.+ ...+..+|+..|.+.+++.++..++ .+++||+.+
T Consensus 107 ~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~ 170 (368)
T TIGR00903 107 IREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPF 170 (368)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999887 3345678888888888877666554 467787643
No 182
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.88 E-value=2e-07 Score=95.14 Aligned_cols=140 Identities=13% Similarity=0.047 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
........+...++.++.|+++||+|||+.+..+..+..++.+... +.++.+...+..++.+++.+...+....+..|.
T Consensus 46 ~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~ 124 (394)
T PRK11652 46 QAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVAL-FAHSLTVLIAASAIQGLGTGVGGVMARTLPRDL 124 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 3444556667778899999999999999999998888887777666 555556666666677777776667777788899
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHH-HHhhcccCCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGL-SVLLLPDTTG 529 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~-~~~~l~et~~ 529 (565)
++.+.++.+.++.++...++..++|.+ ...+..++...+.+.+++.++..+ ..+++||++.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 125 YEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 998899999999988888899899887 333456788888887776655444 3456777644
No 183
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.88 E-value=5.1e-08 Score=100.94 Aligned_cols=139 Identities=13% Similarity=0.014 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC----chHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP----GSFITISLAMVGKFAISSSNVIIPIY 464 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (565)
........++..++.++.|++.||+|||+.+..+.++.+++.++.. ..+ +.+...+..++.+++.+..++.....
T Consensus 64 g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~ 142 (438)
T TIGR00712 64 GFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMG-FVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRT 142 (438)
T ss_pred HHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHh-ccccccchHHHHHHHHHHHHHHhhcchHHHHHH
Confidence 3445566677788899999999999999999988888887777655 322 22333444556667777667777788
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHH-HhhhhhHHHHHHHHHHHHHH-HHhhcccCC
Q psy17080 465 TAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQ-SINIHFPMGLLGVVGVLGGL-SVLLLPDTT 528 (565)
Q Consensus 465 ~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~-~~~~~~~~~~~~~~~~i~~~-~~~~l~et~ 528 (565)
+.|.+|++.|+++.|+.++...+|+.++|.+. ... ..+|+..|++.+++.++..+ ..+++||+.
T Consensus 143 i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 143 MVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred HHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 88999999999999999999999998887662 222 35788888888887776554 445667653
No 184
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.87 E-value=2e-08 Score=101.93 Aligned_cols=143 Identities=10% Similarity=-0.025 Sum_probs=120.9
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
.+...+|.+. +..+.|++.+...++..++.++.|++.||+|+|+.+.++.++.++..++.+++++.+.+++.+++.|
T Consensus 228 ~~~~l~~~g~---s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g 304 (382)
T TIGR00902 228 SAIYWQAAGI---SASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHC 304 (382)
T ss_pred HHHHHHHCCC---CHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 4555567888 7888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhh-hhhHHHHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHH
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYL-FPVPVGYIAISGIAYYSH---NWRLLQWVITIPTIFFLTL 287 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~lG~~~~~~l~~~~~---~Wr~~~~~~~~~~~~~~~~ 287 (565)
++.+...+....++.+. |+++|++..++++ ....+|..+++.+++.+. ++ ..|++.++.+++.+++
T Consensus 305 ~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 305 GTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 99999999999999998 9999999888876 567788888888877763 33 4455555555544433
No 185
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.87 E-value=5.8e-08 Score=99.91 Aligned_cols=130 Identities=14% Similarity=0.101 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc-CChHHHHHHHHHHHHHHHHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy17080 392 TIISGIVEFPAIVISIFILLKM-GRRRPLCLTTLGAGLACLMTLGFAPG-SFITISLAMVGKFAISSSNVIIPIYTAELF 469 (565)
Q Consensus 392 ~~~~~~~~~~~~~~~~~l~dr~-grr~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 469 (565)
.....+...++.+++|+++||+ |||+.+.++.++.+++.+++. .... .....+...+..++.+...+...++.+|.+
T Consensus 51 ~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~-~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elf 129 (493)
T PRK15462 51 FSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLG-ASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELY 129 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH-HhhcchhHHHHHHHHHHHhcccccccHHHHHHHHC
Confidence 3444456677889999999999 999999999998888876655 3221 122222233334555555566778899999
Q ss_pred chh--hhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHh
Q psy17080 470 PTK--MRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVL 522 (565)
Q Consensus 470 p~~--~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~ 522 (565)
|++ .|.++.++..+..++|+.++|.+ ...+..++...|.+.++..+++.+.++
T Consensus 130 p~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 130 EPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred CCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHH
Confidence 986 69999999999999999999999 334556888888887665555544443
No 186
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.87 E-value=7.3e-08 Score=97.70 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
........++..++.++.|++.||+|||+.+..+.++.+++.++.. +.++.+...+..++.+++.+...+....+..|.
T Consensus 29 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 107 (377)
T PRK11102 29 QMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACA-LAQTIDQLIYMRFLHGLAAAAASVVINALMRDM 107 (377)
T ss_pred HHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444556677788899999999999999999999988888888777 555556666667777888887778888999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHH-hhcccCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSV-LLLPDTT 528 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~-~~l~et~ 528 (565)
+|++.|+++.++.+....+|..++|.+ ...+..++...+.+.+++.++..++. +++||++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 108 FPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999999999999999999999999988 33455677788888777776665543 5667654
No 187
>KOG3762|consensus
Probab=98.83 E-value=9.4e-08 Score=95.31 Aligned_cols=170 Identities=15% Similarity=0.199 Sum_probs=124.2
Q ss_pred hccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHH
Q psy17080 349 DLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIGGDV---YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLG 425 (565)
Q Consensus 349 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~ 425 (565)
.++.++.....++...++.+...++++.+..++++.+... +......-.++++..++.+++.+|+|+-+++.+++.+
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~ 445 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLAC 445 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhH
Confidence 4566665555555555555555555555555566655332 2334445567889999999999999999999999888
Q ss_pred HHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHH-HH----HHHHHHHHHHHHHH
Q psy17080 426 AGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVP-AG----VALILIPYLWHMQS 500 (565)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~-~~----lg~~i~p~i~~~~~ 500 (565)
.++=++.+. ...+.|..+.+-++-++..+..+....+|++...|++.|.++.|+.... .. +|++++..+ ...
T Consensus 446 ~~~Rf~~~S-~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~--v~~ 522 (618)
T KOG3762|consen 446 NVGRFLYYS-YLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFV--VER 522 (618)
T ss_pred HHHHHHHHH-HhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhh--hee
Confidence 888888777 7788888888889999999999999999999999999999999987544 33 445554444 344
Q ss_pred hhhhhHHHHHHHHHHHHHHHH
Q psy17080 501 INIHFPMGLLGVVGVLGGLSV 521 (565)
Q Consensus 501 ~~~~~~~~~~~~~~~i~~~~~ 521 (565)
.+....|.++++.+++..++.
T Consensus 523 fg~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 523 FGARTTFRIFGIACLVTLALF 543 (618)
T ss_pred ehhHHHHHHHHHHHHHHHHHH
Confidence 666677777777776655544
No 188
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.80 E-value=5.4e-07 Score=94.43 Aligned_cols=160 Identities=19% Similarity=0.166 Sum_probs=107.7
Q ss_pred HHHHhhhhhhhccCcCCCcHHHHHHHHHHHH-HHHHHHHHHHHhhc-----CChHH-HHHHHHHHHHHHHHHhhcCC--c
Q psy17080 369 SVYLVYYGLVLNLSNIGGDVYLNTIISGIVE-FPAIVISIFILLKM-----GRRRP-LCLTTLGAGLACLMTLGFAP--G 439 (565)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~dr~-----grr~~-l~~~~~~~~~~~~~~~~~~~--~ 439 (565)
.........+.+....+.+.........+.. .++.++.+.++||+ |||+. +..+.+..+++...+....+ +
T Consensus 27 ~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~ 106 (491)
T PRK11010 27 PLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQ 106 (491)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 3333333445555555555433333322222 25789999999999 98885 55666666666555542323 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHH-HhhhhhHHHHHHHHHHH
Q psy17080 440 SFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQ-SINIHFPMGLLGVVGVL 516 (565)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~-~~~~~~~~~~~~~~~~i 516 (565)
.+...+..++.+++.+...+...++..|.+|++.|+.+.++..+...+|.++++.+ ...+ ..+|...|++.+++.++
T Consensus 107 l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll 186 (491)
T PRK11010 107 LRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIP 186 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHH
Confidence 23444455566666676777788999999999999999999999999999998877 2233 24888999998888777
Q ss_pred HHHHHhhcccCC
Q psy17080 517 GGLSVLLLPDTT 528 (565)
Q Consensus 517 ~~~~~~~l~et~ 528 (565)
..+..+++||+.
T Consensus 187 ~~l~~~~~~e~~ 198 (491)
T PRK11010 187 CIIATLLAPEPT 198 (491)
T ss_pred HHHHHHhcCCCc
Confidence 766666677754
No 189
>KOG0255|consensus
Probab=98.79 E-value=1.2e-07 Score=100.67 Aligned_cols=138 Identities=17% Similarity=0.097 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF 469 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 469 (565)
+...+..++.++|.++.|.++||+|||+++.++.++..++.++.+ +.++.+...++-++.|++.+....+.+.+..|.+
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a-~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~ 200 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTA-FAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIV 200 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhccchhHHhHhhheeec
Confidence 445566677889999999999999999999999999999998777 8888889999999999999999999999999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 470 PTKMRNLGVGASSVPAGVALILIPYLWHMQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 470 p~~~r~~~~g~~~~~~~lg~~i~p~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
+++.|+.+..+ ......++.++|.+...-..+|+..+++..+..++..++.++.||+++
T Consensus 201 ~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~r 259 (521)
T KOG0255|consen 201 SPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPR 259 (521)
T ss_pred CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChH
Confidence 99999999999 777777777777663333337888888888877777666666668876
No 190
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.79 E-value=3.3e-07 Score=93.72 Aligned_cols=154 Identities=8% Similarity=-0.083 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Q psy17080 357 RLISFVQYIIWFSVYLVYYGLVLNLSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMT 433 (565)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~ 433 (565)
....+..++........+.......++.+.+ ........++...++.++.|.+.||+|||+.+..+..+.+++.++.
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~ 95 (402)
T TIGR00897 16 LWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAF 95 (402)
T ss_pred hHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 3334443333333333333333333444443 3455566777888999999999999999999999888887776543
Q ss_pred hh--c-CCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHH-HHHHHHH--HHHHhhhhhHH
Q psy17080 434 LG--F-APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVAL-ILIPYLW--HMQSINIHFPM 507 (565)
Q Consensus 434 ~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~-~i~p~i~--~~~~~~~~~~~ 507 (565)
.. . .++.+...+..++.+++.+...+.......+.+|++.|+++.|+.++...+|. .++|.+. ..+..++...+
T Consensus 96 ~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~ 175 (402)
T TIGR00897 96 IVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTL 175 (402)
T ss_pred HHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHH
Confidence 21 2 22334444455556666666666667778889999999999999999988886 5778762 23344543333
Q ss_pred HHH
Q psy17080 508 GLL 510 (565)
Q Consensus 508 ~~~ 510 (565)
+..
T Consensus 176 ~~~ 178 (402)
T TIGR00897 176 WSA 178 (402)
T ss_pred HHH
Confidence 333
No 191
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.79 E-value=2.8e-07 Score=96.63 Aligned_cols=171 Identities=9% Similarity=0.044 Sum_probs=105.7
Q ss_pred hhccccHH-HHHHHHHHHHHHHHHHHhhhhhhhc-cCcCCCcHHHHHH---HHHHHHHHHHHHHHHHHhh-cCChHHHHH
Q psy17080 348 MDLWRTPL-IRLISFVQYIIWFSVYLVYYGLVLN-LSNIGGDVYLNTI---ISGIVEFPAIVISIFILLK-MGRRRPLCL 421 (565)
Q Consensus 348 ~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~dr-~grr~~l~~ 421 (565)
.+.+++|+ ++......++..+..+........+ .+.++.+...... ..........+++|++.|| +|||+.+.+
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~ 93 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIML 93 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 34556664 4444444443333333222222222 2444544322221 2222223334688999999 599999999
Q ss_pred HHHHHHHHHHHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHHHhcccccchhh--hhhHHHHHHHHHHHHHHHHHHH--H
Q psy17080 422 TTLGAGLACLMTLGFAPG-SFITISLAMVGKFAISSSNVIIPIYTAELFPTKM--RNLGVGASSVPAGVALILIPYL--W 496 (565)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~g~~~~~~~lg~~i~p~i--~ 496 (565)
+.++.+++.+++. +..+ .+...+...+.+++.+...+...++..|.+|++. |..+.++.++..++|.+++|.+ .
T Consensus 94 g~~~~~ig~~l~~-~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~ 172 (500)
T PRK09584 94 GAIVLAIGYALVA-WSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPW 172 (500)
T ss_pred HHHHHHHHHHHHH-HhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 9988888877766 4333 2333344455667777667777788999998643 4567888889999999999988 3
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHH
Q psy17080 497 HMQSINIHFPMGLLGVVGVLGGL 519 (565)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~i~~~ 519 (565)
..+..+++..|.+.++..+++.+
T Consensus 173 l~~~~g~~~~F~i~~i~~~i~~i 195 (500)
T PRK09584 173 LAAKYGWSVAFALSVVGMLITVV 195 (500)
T ss_pred HHHhhCHHHHHHHHHHHHHHHHH
Confidence 44567888888887765555443
No 192
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.78 E-value=1.7e-07 Score=98.01 Aligned_cols=135 Identities=12% Similarity=0.059 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF-APGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
.......++.+++.++.|++.||+|||+.+..+.++.+++.++.... ..+.+..++.-++.+++.+..++....++.|.
T Consensus 80 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~ 159 (465)
T TIGR00894 80 LILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKW 159 (465)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhc
Confidence 34445567788899999999999999999999888877776665311 22234555666777888888889999999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHH-hhhhhHHHHHHHHHHHHHHHHhhc
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYL--WHMQS-INIHFPMGLLGVVGVLGGLSVLLL 524 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~-~~~~~~~~~~~~~~~i~~~~~~~l 524 (565)
+|++.|+++.|+.+....+|.+++|.+ ...+. .++..+|.+.+++.++..++++.+
T Consensus 160 ~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 160 APPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999988 33344 378888998888877766655443
No 193
>KOG3764|consensus
Probab=98.77 E-value=3.6e-08 Score=94.65 Aligned_cols=140 Identities=14% Similarity=0.114 Sum_probs=122.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy17080 387 DVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTA 466 (565)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (565)
...+.+...++.+++..++.|.+.||+|+|..++++++++....++++ +..+.+..++.-.+-+++.........++.+
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFa-fg~sy~~l~vAR~LQgvgsA~~~tsglamlA 185 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFA-FGNSYPMLFVARSLQGVGSAFADTSGLAMLA 185 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHH-HcchhHHHHHHHHHhhhhHHHHHhhhHHHHH
Confidence 346667777889999999999999999999999999999999999988 6666677777778888999888889999999
Q ss_pred cccchhh-hhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhcccC
Q psy17080 467 ELFPTKM-RNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLPDT 527 (565)
Q Consensus 467 e~~p~~~-r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et 527 (565)
+.+|.+. |++++|+.-.+..+|-.++|.+ ..++..|+..||++.++++++...+-+++-|.
T Consensus 186 d~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 186 DVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred HHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 9999877 7999999999999999999988 56788899999999999999988877665443
No 194
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.77 E-value=1.2e-06 Score=89.38 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcC-----CchHHHHHHHHHHHHHHHHHHHHHHH
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFA-----PGSFITISLAMVGKFAISSSNVIIPI 463 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (565)
.....+..+...+..+..|++.||+|.|+++.++.++.++..+... +. ++.+...+..++.+++ +..++....
T Consensus 73 g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~-~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~ 150 (462)
T PRK15034 73 FLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLG-IAVQNPNTPFGIFIVIALLCGFA-GANFASSMG 150 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH-HHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHH
Confidence 3444455566667778889999999999999999988888877776 32 4446666667777776 667888889
Q ss_pred hcccccchhhhhhHHHHHHHHHHHHHHHHHH
Q psy17080 464 YTAELFPTKMRNLGVGASSVPAGVALILIPY 494 (565)
Q Consensus 464 ~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~ 494 (565)
.+++.+|++.||++.|+....+.+|..++++
T Consensus 151 ~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 151 NISFFFPKAKQGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred HHHHHCCHhHhHHHHHHHHHHHhhHHHHHHH
Confidence 9999999999999999996556566554433
No 195
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.75 E-value=5.8e-08 Score=90.20 Aligned_cols=161 Identities=17% Similarity=0.147 Sum_probs=124.2
Q ss_pred CCCeEeCCCCcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc---
Q psy17080 129 CLQWTYDSSSFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS--- 205 (565)
Q Consensus 129 C~~~~y~~~~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~--- 205 (565)
|.+=.|..+.|.|.+.+.+++ ++.+...+.++-.+|..+| ++.|.+.|++|.|.+++++.+...++..+...+
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~---sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGY---SQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred hcCcccchhhhhHHHHHHhCC---CHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 444457777889999999999 9999999999999999875 888999999999999999999999998877653
Q ss_pred ----chhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh-c-c-hhHHHHHHH
Q psy17080 206 ----PWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS-H-N-WRLLQWVIT 278 (565)
Q Consensus 206 ----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~-~-~-Wr~~~~~~~ 278 (565)
.++|.+.+..++.|.+.+.....+.....+.+| ++||.+.++.-...+++..+...+...+ . + -+..+....
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~ 168 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAV 168 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 467888888888888877777777777778886 6899999999999999888766554443 2 2 233333444
Q ss_pred HHHHHHHHHhhhcccc
Q psy17080 279 IPTIFFLTLWWIMPES 294 (565)
Q Consensus 279 ~~~~~~~~~~~~~pes 294 (565)
.+.++.++..++++..
T Consensus 169 ~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 169 LPAVVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHHHHhhheecc
Confidence 4455555555555443
No 196
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.75 E-value=2.2e-07 Score=108.21 Aligned_cols=180 Identities=14% Similarity=0.040 Sum_probs=114.4
Q ss_pred hccccHHHHHHHHHHHHHHHHHHHhhhhh----hhccC-cCCCc----HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHH
Q psy17080 349 DLWRTPLIRLISFVQYIIWFSVYLVYYGL----VLNLS-NIGGD----VYLNTIISGIVEFPAIVISIFILLKMGRRRPL 419 (565)
Q Consensus 349 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l 419 (565)
.+++++.++.+++..++..+...+....+ .+... ..+.+ ..+...+..+..++..+++|+++||+|||+++
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 45677777766666555544433322211 11111 11111 22333345566677889999999999999975
Q ss_pred HHHHHH--HHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH--
Q psy17080 420 CLTTLG--AGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL-- 495 (565)
Q Consensus 420 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i-- 495 (565)
.....+ ......++.....+.+.++++.++.+++.+...+...+++.+++|++.|+.++|+.++...+|.+++|.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g 165 (1140)
T PRK06814 86 KILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGG 165 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 432222 1112222221234557777778888888888889999999999999999999999999999999999998
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHhhcccCC
Q psy17080 496 WHMQSINIHFPMGLLGVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et~ 528 (565)
......++...|+..+++.+++.++.+++|+++
T Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 166 LATISGNFVILVALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred HHHhccccHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 334555666556444444455555556677654
No 197
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.75 E-value=5.4e-07 Score=90.89 Aligned_cols=105 Identities=16% Similarity=0.128 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC-chHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP-GSFITISLAMVGKFAISSSNVIIPIYTAE 467 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 467 (565)
.+......++..++.++.|++.||+|||+.+.++.++.+++.++.. +.+ +.+...+..++.+++.+ .++....++.|
T Consensus 40 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~ 117 (366)
T TIGR00886 40 GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAG-LAVQSYSVLLLLRLFIGIAGG-SFASCMPWISF 117 (366)
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHH
Confidence 3444556677788999999999999999999999999888887776 555 55555555566666543 34566788999
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 468 LFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 468 ~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.+|++.|+.+.++......+|..+++.+
T Consensus 118 ~~~~~~r~~~~~~~~~~~~~g~~~~~~i 145 (366)
T TIGR00886 118 FFPKKIQGTALGLAAGWGNMGGGVAQFV 145 (366)
T ss_pred hcCHhhhhHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999887777776666555
No 198
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.74 E-value=1e-07 Score=97.08 Aligned_cols=151 Identities=13% Similarity=-0.027 Sum_probs=112.1
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP-WFELYLVVRFFL 218 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~-~~~~l~~~r~l~ 218 (565)
.|.+.+++++ +..+.+...+.+.++..++.++.|++.||+|||+.+..+..+..++.++....+ +...+ .-++.
T Consensus 228 lp~~l~~~g~---s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~ 302 (393)
T PRK09705 228 LPAFYIEIGA---SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVC 302 (393)
T ss_pred HHHHHHHcCC---ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHH
Confidence 5666667787 777889999999999999999999999999999999988887777766554333 32222 23567
Q ss_pred hhhhhhhHhhhhhhhccccc-cchhHHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHH-hhhcc
Q psy17080 219 GFFCVSIVFSGFVLCMELVG-GKWLTIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLTL-WWIMP 292 (565)
Q Consensus 219 G~~~~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~~-~~~~p 292 (565)
|++.+...+.......+..+ +++|++..++.+....++..++|.+...+ .+|...+++..+.+++.... ..+.|
T Consensus 303 g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 303 GLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 88888888877777777775 57889999988888888877787776654 34677777766665554444 55667
Q ss_pred cch
Q psy17080 293 ESP 295 (565)
Q Consensus 293 esp 295 (565)
|++
T Consensus 383 ~~~ 385 (393)
T PRK09705 383 ARF 385 (393)
T ss_pred ccc
Confidence 764
No 199
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.74 E-value=1.2e-06 Score=89.63 Aligned_cols=133 Identities=9% Similarity=-0.007 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc--CCchHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF--APGSFITISLAMVGKFAISSSNVIIPIYTA 466 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (565)
........++.+++.+..+++.||+|||+.+..+.++.+++.++.... .++.+...+..++.+++.+...+....++.
T Consensus 41 g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~ 120 (410)
T TIGR00885 41 ALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYIL 120 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHH
Confidence 445556667788899999999999999999999999988887775411 233455666677888888888888888999
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHHHHH-H---------------------------HHhhhhhHHHHHHHHHHHHH
Q psy17080 467 ELFPTKMRNLGVGASSVPAGVALILIPYLWH-M---------------------------QSINIHFPMGLLGVVGVLGG 518 (565)
Q Consensus 467 e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~-~---------------------------~~~~~~~~~~~~~~~~~i~~ 518 (565)
+..|++.|++..++.+....+|..++|.+.. + +..+++.+|.+.+++.++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 121 VMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred HHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988721 1 11346778888877666654
Q ss_pred HHH
Q psy17080 519 LSV 521 (565)
Q Consensus 519 ~~~ 521 (565)
++.
T Consensus 201 ~~~ 203 (410)
T TIGR00885 201 LLI 203 (410)
T ss_pred HHH
Confidence 444
No 200
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.73 E-value=1.8e-07 Score=96.46 Aligned_cols=147 Identities=14% Similarity=0.114 Sum_probs=123.8
Q ss_pred eccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccch--hhHHHHHHHHHHHHHHHHh--------cchhHHHHHH
Q psy17080 145 SEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRK--KALMGSLVFQLVLGVLVAI--------SPWFELYLVV 214 (565)
Q Consensus 145 ~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr--~~l~~~~~l~~~~~~~~~~--------~~~~~~l~~~ 214 (565)
+++++ +..+...+.-+..+..++|++++|++.||+|.| ++++.+++++.+..+...+ .++.+.+.+.
T Consensus 310 ~~lg~---s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~ 386 (477)
T PF11700_consen 310 EVLGM---STTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVL 386 (477)
T ss_pred HhcCc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHH
Confidence 47888 777777778888889999999999999999999 8999988888766666555 6788889999
Q ss_pred HHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHHhhh
Q psy17080 215 RFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLTLWWI 290 (565)
Q Consensus 215 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~~~~~ 290 (565)
-++.|++.|+..+...++.+|..|+++.+...+++.+..-....++|.+...+ .+-|+.++...++.++.+++.++
T Consensus 387 a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 387 AVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999988888888888766554 45788888777777777777776
Q ss_pred cccc
Q psy17080 291 MPES 294 (565)
Q Consensus 291 ~pes 294 (565)
+++.
T Consensus 467 v~~~ 470 (477)
T PF11700_consen 467 VDVE 470 (477)
T ss_pred ccch
Confidence 6653
No 201
>KOG0569|consensus
Probab=98.72 E-value=3.6e-07 Score=92.76 Aligned_cols=137 Identities=20% Similarity=0.156 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhh--cCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q psy17080 393 IISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLG--FAPGSFITISLAMVGKFAISSSNVIIPIYTAELFP 470 (565)
Q Consensus 393 ~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 470 (565)
.+..++.++|.+++++++||+|||..+.+..++..++.++... ..+.....++.-++.|...+........|..|..|
T Consensus 67 s~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP 146 (485)
T KOG0569|consen 67 SIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISP 146 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCh
Confidence 3455778899999999999999999888887777666555542 23444667777788888889989999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHH---HHH-hhhhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 471 TKMRNLGVGASSVPAGVALILIPYLWH---MQS-INIHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 471 ~~~r~~~~g~~~~~~~lg~~i~p~i~~---~~~-~~~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
++.||....+..+...+|..++..+.. +.+ ..|...+.+..+.+++..+...++||+.+
T Consensus 147 ~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk 209 (485)
T KOG0569|consen 147 KNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPK 209 (485)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999999998888888888888865522 222 23445555566666777777789999877
No 202
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.71 E-value=5e-08 Score=99.26 Aligned_cols=140 Identities=19% Similarity=0.132 Sum_probs=103.6
Q ss_pred cccee-eccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHH--HHHHh--cchhHHHHHH
Q psy17080 140 GHTII-SEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLG--VLVAI--SPWFELYLVV 214 (565)
Q Consensus 140 ~~~i~-~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~--~~~~~--~~~~~~l~~~ 214 (565)
.+.+. +++++ +..+.+...+...++..++.++.|+++||+|||+.+.....+..+.. +...+ .++.+.+++.
T Consensus 242 ~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (394)
T TIGR00883 242 LPTYLTQTLGL---SANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFL 318 (394)
T ss_pred HHHHHHHhcCC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 34443 55676 66778888999999999999999999999999998776555444333 22222 2567777788
Q ss_pred HHHHhhhhhhhHhhhhhhhccccccchhHHHHHH-hhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHH
Q psy17080 215 RFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVM-YLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTI 282 (565)
Q Consensus 215 r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~ 282 (565)
.++.|++.+...+...+++.|.+|+++|+++.++ .+.+..+|..++|.++..+ .+|+..++...+..+
T Consensus 319 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 319 VLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 8999999989999999999999999999988877 4455667777777766553 238777666555443
No 203
>KOG1330|consensus
Probab=98.71 E-value=1e-08 Score=100.47 Aligned_cols=140 Identities=18% Similarity=0.110 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
.+......++..+++++.|++.||+.|++++.++..+..++.++.. +....|.+.++-.+.|+|.....++..+++++.
T Consensus 71 Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~-fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~ 149 (493)
T KOG1330|consen 71 GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASG-FSNHFWQVLLCRGFVGIGEASYSPIAPSLIADS 149 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccchhhhcccchhHhhhc
Confidence 3555566677888999999999999999999999999999988887 555558888888889999999999999999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHH--HHH-HhhhhhHHHHHHHHHHHHHHHH-hhcccCCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYLW--HMQ-SINIHFPMGLLGVVGVLGGLSV-LLLPDTTG 529 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~-~~~~~~~~~~~~~~~~i~~~~~-~~l~et~~ 529 (565)
+|...|++++++.++...+|+.++-... ... ...|++.|.+.+++.++.+++. ++++|.++
T Consensus 150 f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 150 FPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred CcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 9999999999999999888877664441 111 2348888999999998877765 56666654
No 204
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.70 E-value=3.4e-07 Score=106.89 Aligned_cols=106 Identities=10% Similarity=-0.048 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhh--cCCchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLG--FAPGSFITISLAMVGKFAISSSNVIIPIYTAE 467 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 467 (565)
+...+..+..+++.++.|+++||+|||+++.++.++.++..++... ...+.+.+++..++.+++.+...+...+++.|
T Consensus 51 ~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 130 (1146)
T PRK08633 51 IVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPE 130 (1146)
T ss_pred HHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHH
Confidence 3344555667788899999999999999998887665544443321 22344566666777788888888889999999
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 468 LFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 468 ~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.+|++.|+.++|+..+...+|.+++|.+
T Consensus 131 ~~~~~~r~~~~~~~~~~~~ig~~lg~~l 158 (1146)
T PRK08633 131 LVGKENLSRANGLLEAFTIVAILAGTAL 158 (1146)
T ss_pred hcCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988
No 205
>PRK15075 citrate-proton symporter; Provisional
Probab=98.70 E-value=4.6e-07 Score=93.68 Aligned_cols=111 Identities=17% Similarity=0.173 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchH--------HHHHHHHHHHHHHHHHHHHHHHhcccccch
Q psy17080 400 FPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSF--------ITISLAMVGKFAISSSNVIIPIYTAELFPT 471 (565)
Q Consensus 400 ~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 471 (565)
.++.++.|++.||+|||+.+..+.++.+++.++.. +.++.+ ..++.-++.+++.+...+....+..|.+|+
T Consensus 70 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~ 148 (434)
T PRK15075 70 PLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIA-FVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATP 148 (434)
T ss_pred hhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHH-hCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCc
Confidence 46788899999999999999999999888888877 555543 234445566777777777788999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHH----------HHHhhhhhHHHHHH
Q psy17080 472 KMRNLGVGASSVPAGVALILIPYLWH----------MQSINIHFPMGLLG 511 (565)
Q Consensus 472 ~~r~~~~g~~~~~~~lg~~i~p~i~~----------~~~~~~~~~~~~~~ 511 (565)
+.|+++.++.+....+|..++|.+.. ....+|+.+|++..
T Consensus 149 ~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 149 GRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 99999999988887777766665511 13457777776543
No 206
>PTZ00207 hypothetical protein; Provisional
Probab=98.69 E-value=1.1e-06 Score=92.22 Aligned_cols=123 Identities=13% Similarity=0.020 Sum_probs=89.2
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcC-----CchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhh
Q psy17080 402 AIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFA-----PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 476 (565)
Q Consensus 402 ~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 476 (565)
..++.|++.||+|+|+++.++.++.+++.++.+... ++.+.+.+..++.+++.+..++.....+.+.+| +.||.
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~ 155 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGA 155 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHH
Confidence 445789999999999999999999999988877321 234555666667777777777777778888897 67999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHhhhhhHHHHHHHHHHHHHHHH-hhcc
Q psy17080 477 GVGASSVPAGVALIL-IPYLWHMQSINIHFPMGLLGVVGVLGGLSV-LLLP 525 (565)
Q Consensus 477 ~~g~~~~~~~lg~~i-~p~i~~~~~~~~~~~~~~~~~~~~i~~~~~-~~l~ 525 (565)
+.|+......+|+++ +|+...+...++...+++.+++.++..++. .+++
T Consensus 156 a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 156 VVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhee
Confidence 999999999999975 444433323345566667776666655544 3443
No 207
>KOG0254|consensus
Probab=98.68 E-value=2.9e-07 Score=97.15 Aligned_cols=140 Identities=19% Similarity=0.283 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
.+......++..++.++.++++|++|||+.+..+.++..++.++.. +.++.....+.-++.|++.+....+...|.+|.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~-~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEi 170 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIA-LAPSWYQLIVGRILTGLGVGGASVLAPVYISEI 170 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHhccchhhhhhcchhhHhhc
Confidence 4566677788899999999999999999999999999999999888 777778888888999999999999999999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHH-HH--hhhhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYLWHM-QS--INIHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i~~~-~~--~~~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
.|++.||...+..+....+|..++-.+... .+ .+|+.++.+..+.+++..+..+++||+.+
T Consensus 171 ap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~ 234 (513)
T KOG0254|consen 171 APAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPR 234 (513)
T ss_pred CChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChH
Confidence 999999999999988888888777444222 22 36777888887777777777788898866
No 208
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.67 E-value=6.6e-05 Score=76.77 Aligned_cols=248 Identities=11% Similarity=0.062 Sum_probs=145.1
Q ss_pred chhhHHHHHHHHHHHhhh-hhhhhcccccccchhhHHHHHHHHHHHHHHHHhc----c----------------------
Q psy17080 154 SSLESLAEMVFLLGVAFG-GFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS----P---------------------- 206 (565)
Q Consensus 154 ~~~~~l~~s~~~lg~~ig-~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~----~---------------------- 206 (565)
...+.++-+...+..++. .++.+++++|++|++++-.....+.+..++.++. +
T Consensus 42 ae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~ 121 (472)
T TIGR00769 42 AEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMG 121 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHH
Confidence 356778888777766666 8899999999999999888777776666665554 1
Q ss_pred -----hhHHHHHHHHHHhhhhhhhHh-hhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc-----------c
Q psy17080 207 -----WFELYLVVRFFLGFFCVSIVF-SGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH-----------N 269 (565)
Q Consensus 207 -----~~~~l~~~r~l~G~~~~~~~~-~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~-----------~ 269 (565)
+.|...+.-....+-...... .-..+++|.+..++-.|..++..++.++|.++++.+...+. .
T Consensus 122 ~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~ 201 (472)
T TIGR00769 122 FIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDG 201 (472)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCh
Confidence 122233333444444344443 56788999999999999999999999999999997766542 3
Q ss_pred hh----HHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCccc
Q psy17080 270 WR----LLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKV 345 (565)
Q Consensus 270 Wr----~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (565)
|. ..+.+.++..++...+.+.+.+.. ..+.+. .+.+ +..++++.+..-..
T Consensus 202 ~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~---~~~~~~-----------------~~~~------~~~~k~k~k~~~~e 255 (472)
T TIGR00769 202 WHVSLKNLMVIVICSGLAIILLYWWVNRNV---LTDPRS-----------------YNPA------LKEKKVKPKMSTME 255 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCccc-----------------cchh------hccccCCCCCCHHH
Confidence 42 222333333333333333221100 000000 0000 00011111112235
Q ss_pred chhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCCCcH-------HHHHHHHHHHHHHHHHHHHHHHhhcCChHH
Q psy17080 346 QVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIGGDV-------YLNTIISGIVEFPAIVISIFILLKMGRRRP 418 (565)
Q Consensus 346 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~dr~grr~~ 418 (565)
+++.++|+|.++...+...+...+..+.++...-.......+. .......++..++..++.+.+.+|+|-+..
T Consensus 256 s~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~ 335 (472)
T TIGR00769 256 SLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTA 335 (472)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 6778899999888777777776777776654332222221111 122334455555666677899999998766
Q ss_pred HHHHHHHHH
Q psy17080 419 LCLTTLGAG 427 (565)
Q Consensus 419 l~~~~~~~~ 427 (565)
..+.-++..
T Consensus 336 a~i~Pii~l 344 (472)
T TIGR00769 336 ALITPLVML 344 (472)
T ss_pred HHHHHHHHH
Confidence 655444433
No 209
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.66 E-value=5.5e-07 Score=94.00 Aligned_cols=129 Identities=10% Similarity=0.034 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHhh-cCChHHHHHHHHHHHHHHHHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHHHhcccccchhh
Q psy17080 396 GIVEFPAIVISIFILLK-MGRRRPLCLTTLGAGLACLMTLGFAPGS-FITISLAMVGKFAISSSNVIIPIYTAELFPTKM 473 (565)
Q Consensus 396 ~~~~~~~~~~~~~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 473 (565)
.+......+++|+++|| +|||+++.++.++.+++.+... +..+. ....+...+.+++.+...+...+++.|.+|++.
T Consensus 60 ~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~-~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~ 138 (489)
T PRK10207 60 AALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTG-MSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKD 138 (489)
T ss_pred HHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-HhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCc
Confidence 33444556789999999 9999999999999999888777 44332 223344555667777777888899999998874
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhcc
Q psy17080 474 --RNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLP 525 (565)
Q Consensus 474 --r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~ 525 (565)
|+.++++..+..++|.+++|.+ ...+..+|+..|.+.++..+++.+.+...+
T Consensus 139 ~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 139 PRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcc
Confidence 5778888888899999888877 344556788888776554444444444433
No 210
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.64 E-value=3.8e-07 Score=92.62 Aligned_cols=139 Identities=9% Similarity=0.024 Sum_probs=110.2
Q ss_pred cceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhh
Q psy17080 141 HTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGF 220 (565)
Q Consensus 141 ~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~ 220 (565)
+...+|.++ +....|...+...++..++.++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++..++.|+
T Consensus 229 ~~~~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 229 AIYWQAAGY---SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCG 305 (382)
T ss_pred HHHHHHCCC---CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 344456777 66778999999999999999999999999999999999999999888888889999999999999999
Q ss_pred hhhhhHhhhhhhhccccccchhHHHHHHhh-hhhHHHHHHHHHHHHHhc---chhHHHHHHHHHHHHH
Q psy17080 221 FCVSIVFSGFVLCMELVGGKWLTIMGVMYL-FPVPVGYIAISGIAYYSH---NWRLLQWVITIPTIFF 284 (565)
Q Consensus 221 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~lG~~~~~~l~~~~~---~Wr~~~~~~~~~~~~~ 284 (565)
+.+...+....++.+. +++++++..+... ....+|..+++.+++.+. ++ ..++..++.+++.
T Consensus 306 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 306 TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 9998888888888886 5666788877775 555667777777776653 44 3455555544443
No 211
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.62 E-value=7.3e-07 Score=92.36 Aligned_cols=114 Identities=16% Similarity=0.130 Sum_probs=95.2
Q ss_pred chhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc-chhHHHHHHHHHHhhhhhhhHhhhhhh
Q psy17080 154 SSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS-PWFELYLVVRFFLGFFCVSIVFSGFVL 232 (565)
Q Consensus 154 ~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~ 232 (565)
....++..+...++.+++.+++|+++||+|||+++..+.++.+++.++..+. ++.+.+++..++.|++.+...+...++
T Consensus 256 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 335 (437)
T TIGR00792 256 PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWAL 335 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777888899999999999999999999999999998888887777665 466777788899999999999999999
Q ss_pred hccccc-------cchhHHHHHHhhhhhHHHHHHHHHHHHHh
Q psy17080 233 CMELVG-------GKWLTIMGVMYLFPVPVGYIAISGIAYYS 267 (565)
Q Consensus 233 i~e~~~-------~~~r~~~~~~~~~~~~lG~~~~~~l~~~~ 267 (565)
++|..+ ++++|...++.+....+|..+++.+...+
T Consensus 336 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 336 VADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988865 45678999999888888888887766543
No 212
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.59 E-value=3.3e-06 Score=84.87 Aligned_cols=125 Identities=16% Similarity=0.111 Sum_probs=87.9
Q ss_pred HHHHHHHHhhc-----CChHHH-HHHHHHHHHHHHHHhhcCCc-h--HHHHHHHHHHHHHHHHHHHHHHHhcccccchhh
Q psy17080 403 IVISIFILLKM-----GRRRPL-CLTTLGAGLACLMTLGFAPG-S--FITISLAMVGKFAISSSNVIIPIYTAELFPTKM 473 (565)
Q Consensus 403 ~~~~~~l~dr~-----grr~~l-~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 473 (565)
.++.|.++||+ |||+.+ ..+.++.+++...+. +.+. . +......++.++..+...+...+++.|.+|++.
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~-~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 116 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS-FLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE 116 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH-cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh
Confidence 78899999997 888864 556666666655555 3322 2 333334444555556666777889999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH--HHHHhh--------hhhHHHHHHHHHHHHHHHHh-hcccCC
Q psy17080 474 RNLGVGASSVPAGVALILIPYLW--HMQSIN--------IHFPMGLLGVVGVLGGLSVL-LLPDTT 528 (565)
Q Consensus 474 r~~~~g~~~~~~~lg~~i~p~i~--~~~~~~--------~~~~~~~~~~~~~i~~~~~~-~l~et~ 528 (565)
|+.+.|+......+|.+++|.+. .....+ +..+|++.+++.+++.+..+ ..||.+
T Consensus 117 r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 117 LGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999988873 234445 77888888887777655544 356643
No 213
>PRK10133 L-fucose transporter; Provisional
Probab=98.59 E-value=7.1e-06 Score=84.73 Aligned_cols=115 Identities=6% Similarity=-0.065 Sum_probs=90.1
Q ss_pred cCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHh--hcCCchHHHHHHHHHHHHHHH
Q psy17080 381 LSNIGGD---VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTL--GFAPGSFITISLAMVGKFAIS 455 (565)
Q Consensus 381 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 455 (565)
.+.++.+ ..+......++..++.++.+.+.||+|||+++..+..+.+++.++.. ...++.+...+..++.+++.+
T Consensus 53 ~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g 132 (438)
T PRK10133 53 QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLG 132 (438)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 4444444 34455566777888999999999999999999999999988887642 134555666677788889999
Q ss_pred HHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 456 SSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 456 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
...+....++.+..|.+.|....++.+....+|..++|.+
T Consensus 133 ~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~ 172 (438)
T PRK10133 133 CLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVF 172 (438)
T ss_pred HHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888777777777888888888999998877
No 214
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.59 E-value=2.9e-07 Score=89.80 Aligned_cols=146 Identities=15% Similarity=0.075 Sum_probs=125.9
Q ss_pred ccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhh
Q psy17080 146 EWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSI 225 (565)
Q Consensus 146 ~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 225 (565)
++|+ ++.+..++.....+..++|+++.|+|.||+|-|+++..++++..+.++..-+...-..+.+.-.+.|+..|+.
T Consensus 282 ~~gl---s~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~ 358 (438)
T COG2270 282 DLGL---SSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGA 358 (438)
T ss_pred HcCc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchH
Confidence 7899 8888888888899999999999999999999999999999999999888888777777778889999999999
Q ss_pred HhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHHhhhcccc
Q psy17080 226 VFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLTLWWIMPES 294 (565)
Q Consensus 226 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~~~~~~pes 294 (565)
...+.++..+.+|+++-++..+++....-.+..++|.+...+ .+-|.-+....++.++.++..+.+|+.
T Consensus 359 qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 359 QASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999999999999988888888888766554 467777777666666666667777764
No 215
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.58 E-value=1.2e-05 Score=79.64 Aligned_cols=318 Identities=14% Similarity=0.083 Sum_probs=162.0
Q ss_pred HHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhcccc
Q psy17080 158 SLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELV 237 (565)
Q Consensus 158 ~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~ 237 (565)
+.+.-+-.+...+.-+...++.+|+..+.=+..+.+++.++.++.+++++.++=+++-.+.+++.|........+.. .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 44555555666667777778888877655556667788889999999999999999999999998888777777644 44
Q ss_pred ccchhHHHHHHhhhhhHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHHHHH-hhhcccchhHHHhcCCHHHHHHHHH
Q psy17080 238 GGKWLTIMGVMYLFPVPVGYIAISGIAYYSH----NWRLLQWVITIPTIFFLTL-WWIMPESPRWLVSMGRNKEAMKILG 312 (565)
Q Consensus 238 ~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~----~Wr~~~~~~~~~~~~~~~~-~~~~pesp~~l~~~~~~~~a~~~l~ 312 (565)
++ ...+.+..|.+.+.++|+..-..+. +-|..+++.....++..+. ++.+|.++... ..++.++
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~-~~~~~~~------ 209 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNR-PYQESES------ 209 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccccC-CCcccCC------
Confidence 43 2456677777777777665433322 3465666655554444444 44444432100 0000000
Q ss_pred HHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccc-cHHHHHHHHHHHHHHHHHHHhhhhhh--hccCcCCCcHH
Q psy17080 313 DAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWR-TPLIRLISFVQYIIWFSVYLVYYGLV--LNLSNIGGDVY 389 (565)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 389 (565)
.++..++...++..+.+.+...+.++++-++ -+.+...++-....++.-++...+.. +..+....+..
T Consensus 210 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r 280 (402)
T PF02487_consen 210 ---------EDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPR 280 (402)
T ss_pred ---------CCcccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHH
Confidence 0000000000000000011111122222111 11122222222233333333322221 11111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHH--HHHHHHHHHHh--hcCCchHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTT--LGAGLACLMTL--GFAPGSFITISLAMVGKFAISSSNVIIPIYT 465 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (565)
-..-..++..-+|.+++---...+.-|++.+... .+-.+.+++-. .+.++.|..+++++.-|+.-|..+...+..+
T Consensus 281 ~~Y~~Y~~~YQ~GVFISRSS~~~~rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I 360 (402)
T PF02487_consen 281 DQYRWYQLLYQLGVFISRSSLPFFRIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRI 360 (402)
T ss_pred HHHHHHHHHHHHHHhhhhcceeeeehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 1111222222222222211111122233322222 22111111111 1345557766777777888888888888888
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Q psy17080 466 AELFPTKMRNLGVGASSVPAGVALILIPYLW 496 (565)
Q Consensus 466 ~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~ 496 (565)
.|-.|++.|..++|...+.-.+|-.++.++.
T Consensus 361 ~~~~~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 361 SEEVPPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred HhcCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 8888999999999999999999988888773
No 216
>KOG4332|consensus
Probab=98.58 E-value=9.3e-06 Score=73.91 Aligned_cols=329 Identities=12% Similarity=0.006 Sum_probs=159.1
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVL 232 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 232 (565)
.+.++|.+.-+-+-..++...+.|-++|+-|||+.-+.-.+...+++ ++-.++.|-.++++|.+-|++.+..+..--++
T Consensus 70 gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsW 148 (454)
T KOG4332|consen 70 GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFSAFESW 148 (454)
T ss_pred cCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHHHHHHH
Confidence 33444545545555556677788899999999996554444333332 34457889999999999999998888777554
Q ss_pred -hccccccchhHHHHHHhh--------hhhHHHHHHHHHHHHHhcchh-----HHHHHHHHHHHHHHHHhhhcccchhHH
Q psy17080 233 -CMELVGGKWLTIMGVMYL--------FPVPVGYIAISGIAYYSHNWR-----LLQWVITIPTIFFLTLWWIMPESPRWL 298 (565)
Q Consensus 233 -i~e~~~~~~r~~~~~~~~--------~~~~lG~~~~~~l~~~~~~Wr-----~~~~~~~~~~~~~~~~~~~~pesp~~l 298 (565)
+.|... +|+.-.-+.. .+..+-.+++++.+..+.+|- .+|-..+....+...+.+ ..|-
T Consensus 149 liaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil-----~~W~ 221 (454)
T KOG4332|consen 149 LIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVIL-----SSWS 221 (454)
T ss_pred HHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH-----hhhh
Confidence 566552 2332211211 122222333334443333332 334333222222111111 1243
Q ss_pred HhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy17080 299 VSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLV 378 (565)
Q Consensus 299 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (565)
..-++..|.++.+.+.+. ..+.+..++++..+-.+ ....-...|....
T Consensus 222 ENygdps~~kdlltqf~g-----------------------------aa~aiaSD~ki~LLG~i---qsLFE~smytFVF 269 (454)
T KOG4332|consen 222 ENYGDPSENKDLLTQFKG-----------------------------AARAIASDEKIALLGAI---QSLFEGSMYTFVF 269 (454)
T ss_pred hccCChhhhHHHHHHhhH-----------------------------hHHHHhcchHHHHHHHH---HHHHhhhhheeee
Confidence 344454444444433221 11223333332222111 1111122222222
Q ss_pred hccCcCC-----CcHHHHHHHHHHHHHHHHHHHHHHHhhcCC--hHHHHHHHHHHHHHHHHHhh---cCCch---HHHHH
Q psy17080 379 LNLSNIG-----GDVYLNTIISGIVEFPAIVISIFILLKMGR--RRPLCLTTLGAGLACLMTLG---FAPGS---FITIS 445 (565)
Q Consensus 379 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~dr~gr--r~~l~~~~~~~~~~~~~~~~---~~~~~---~~~~~ 445 (565)
++.+.+. ...+..+..+.+..++|+-+...+..|-.. ...+.+.+++.+..+.+... ..|+. ....+
T Consensus 270 LWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i 349 (454)
T KOG4332|consen 270 LWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLI 349 (454)
T ss_pred eecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHH
Confidence 3333332 122333344445555666555555544332 23444444444443333221 11221 33345
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH--hhhhhHHHHHHHHHHHHHHHH
Q psy17080 446 LAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWHMQS--INIHFPMGLLGVVGVLGGLSV 521 (565)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~~~~--~~~~~~~~~~~~~~~i~~~~~ 521 (565)
..++.-...|..+|...-+-....|.+.|++.+-+...--.+-.-++-+....+. .+....|.++.+...++.+..
T Consensus 350 ~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 350 GFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred HHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHH
Confidence 5566677888889999999999999999987665543322222111111111111 233456666666666654443
No 217
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.56 E-value=6.1e-06 Score=84.45 Aligned_cols=161 Identities=17% Similarity=0.183 Sum_probs=108.1
Q ss_pred HHHHhhhhhhhccCcCCCcHHHHHHHHHH-HHHHHHHHHHHHHhhc-----CChH-HHHHHHHHHHHHHHHHhhcCCch-
Q psy17080 369 SVYLVYYGLVLNLSNIGGDVYLNTIISGI-VEFPAIVISIFILLKM-----GRRR-PLCLTTLGAGLACLMTLGFAPGS- 440 (565)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~dr~-----grr~-~l~~~~~~~~~~~~~~~~~~~~~- 440 (565)
...+....++.++.+.+.+......+..+ .-.+..++.+.++||+ |||+ .+..+.++.+++...+....+..
T Consensus 14 ~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~ 93 (402)
T PRK11902 14 PLALTSGTLQAWMTVEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAA 93 (402)
T ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccch
Confidence 34444455666666666554433322221 1246788999999999 7765 67777777776666665222222
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHH-hhhhhHHHHHHHHHHH
Q psy17080 441 -FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLW--HMQS-INIHFPMGLLGVVGVL 516 (565)
Q Consensus 441 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~-~~~~~~~~~~~~~~~i 516 (565)
+...+..++.++......+...+++.|.+|+++|+++.++..+...+|.++++.+. ..+. .++...|++.+++.++
T Consensus 94 ~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~ 173 (402)
T PRK11902 94 LWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLA 173 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHH
Confidence 33344444555666666778889999999999999999999988888988887762 2332 3788888888887776
Q ss_pred HHHHHhhcccCCC
Q psy17080 517 GGLSVLLLPDTTG 529 (565)
Q Consensus 517 ~~~~~~~l~et~~ 529 (565)
..+..+++||++.
T Consensus 174 ~~l~~~~~~e~~~ 186 (402)
T PRK11902 174 GALTTLWAPEPEV 186 (402)
T ss_pred HHHHHHhcCCCcc
Confidence 6665566777643
No 218
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.55 E-value=4.2e-07 Score=92.84 Aligned_cols=134 Identities=13% Similarity=0.093 Sum_probs=107.9
Q ss_pred chhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhh
Q psy17080 154 SSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLC 233 (565)
Q Consensus 154 ~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 233 (565)
....|...++..+...++.+..|++.||+|||+.+.++.++.++..++..++++.+.+++.+++.|++..........++
T Consensus 253 ~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 332 (396)
T TIGR00882 253 TRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYI 332 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34568888888888899999999999999999999999998888888878889999999999999999776666667777
Q ss_pred ccccccchhHHHHHH-hhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHH
Q psy17080 234 MELVGGKWLTIMGVM-YLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTL 287 (565)
Q Consensus 234 ~e~~~~~~r~~~~~~-~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~ 287 (565)
.+..+++.++...+. .+....+|..+++.+++.+ .||+..|++.++..++..+.
T Consensus 333 ~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 333 TSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 777887777765554 5567788888887776654 37889999887776555443
No 219
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.54 E-value=1.4e-06 Score=85.02 Aligned_cols=127 Identities=22% Similarity=0.297 Sum_probs=105.0
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcch--hHHHHHHHHHHhhhhhhhHhhhhhh
Q psy17080 155 SLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPW--FELYLVVRFFLGFFCVSIVFSGFVL 232 (565)
Q Consensus 155 ~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~ 232 (565)
...++..+.+.++..++.++.|.++||+|||+.+..+.....++.+..++..+ .+.+++.|++.|++.+...+...++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 46789999999999999999999999999998888888776666777777776 8999999999999999999999999
Q ss_pred hcccccc-chhHHHHHHhhh-hhHHHHHHHHHHHHHh-----cchhHHHHHHHHHH
Q psy17080 233 CMELVGG-KWLTIMGVMYLF-PVPVGYIAISGIAYYS-----HNWRLLQWVITIPT 281 (565)
Q Consensus 233 i~e~~~~-~~r~~~~~~~~~-~~~lG~~~~~~l~~~~-----~~Wr~~~~~~~~~~ 281 (565)
+.|+.++ ++|+...+.... ...+|.++++.++..+ .+||..+.+.....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 9999988 678888888777 5777777777665443 37888666555444
No 220
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.54 E-value=1.6e-06 Score=90.51 Aligned_cols=175 Identities=14% Similarity=0.140 Sum_probs=114.3
Q ss_pred cccHHHHHHHHHHHHHHHHHHHhhh----hhhhccCcCCCc--HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHH
Q psy17080 351 WRTPLIRLISFVQYIIWFSVYLVYY----GLVLNLSNIGGD--VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTL 424 (565)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~ 424 (565)
++++++...+...++.+...++... .+.....+++.+ ..+......+...++.++.|.++|.+|||..++.+.+
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~ 116 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSL 116 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHH
Confidence 4555555444444443333322222 122223344433 3344455667777888999999999999999999999
Q ss_pred HHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH--HHHhh
Q psy17080 425 GAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH--MQSIN 502 (565)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~--~~~~~ 502 (565)
+..++.++.. ..++....+....+.+++.+... .....++|+.|.+.|..+.++.....-....++|.+.. ..+.+
T Consensus 117 l~vvG~Iv~a-tA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~ 194 (599)
T PF06609_consen 117 LGVVGSIVCA-TAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSG 194 (599)
T ss_pred HHHhHHHHhh-cCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCC
Confidence 9999999888 66666677777778788766553 45666899999999988877766554444445666622 23457
Q ss_pred hhhHHHHHHHHHHHHHHHH--hhcccC
Q psy17080 503 IHFPMGLLGVVGVLGGLSV--LLLPDT 527 (565)
Q Consensus 503 ~~~~~~~~~~~~~i~~~~~--~~l~et 527 (565)
|++.|++.+++..++.+++ ++.|.+
T Consensus 195 WRw~~~~~~i~~~i~~vl~~~fY~PP~ 221 (599)
T PF06609_consen 195 WRWIFYIFIIWSGIALVLIFFFYFPPP 221 (599)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8888888777766665443 344443
No 221
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.54 E-value=2.3e-06 Score=85.96 Aligned_cols=138 Identities=11% Similarity=0.043 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF 469 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 469 (565)
........+..++.+.+|++.||+|.|+++.++.+..++..++.. +..+...+.+.-++.|++.+..+ ..+.++...+
T Consensus 66 ~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~-fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~Wf 143 (511)
T TIGR00806 66 EIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLL-LGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLV 143 (511)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHC
Confidence 344455567778899999999999999999999999999888888 65566677777888899999988 8899999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHH-HHHhhhhh---HHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 470 PTKMRNLGVGASSVPAGVALILIPYLWH-MQSINIHF---PMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 470 p~~~r~~~~g~~~~~~~lg~~i~p~i~~-~~~~~~~~---~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
|++.|+++.|+.+....+|.++++.+.. +...++.. ...+......++.++.+++|..++
T Consensus 144 P~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 144 PPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 9999999999999999999999888822 44444433 223333444556667788886655
No 222
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.52 E-value=4.9e-07 Score=97.18 Aligned_cols=138 Identities=13% Similarity=0.082 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC-------------------------------
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP------------------------------- 438 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~------------------------------- 438 (565)
+......++..++.++.+++.||.+||+.+.++.++.+++.++.+ +.+
T Consensus 72 ~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~a-lphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~ 150 (633)
T TIGR00805 72 LINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLS-LPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLT 150 (633)
T ss_pred eeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHh-ChHHhcCCccccccccccccccccccccccCCCC
Confidence 334455667778889999999999999999999999999988876 321
Q ss_pred ------------------c-h-HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH-
Q psy17080 439 ------------------G-S-FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH- 497 (565)
Q Consensus 439 ------------------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~- 497 (565)
+ . ..+++.-++.|++.+..++...+++.|.+|++.|+...|+.+....+|..+++.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~ 230 (633)
T TIGR00805 151 QALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSF 230 (633)
T ss_pred CCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 0 1 223445667777777888888999999999999999999999999999999988721
Q ss_pred -HHH----------------------hhhhhHHHHHHHHHHHHHHHHhhcccCC
Q psy17080 498 -MQS----------------------INIHFPMGLLGVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 498 -~~~----------------------~~~~~~~~~~~~~~~i~~~~~~~l~et~ 528 (565)
... ..|+..|++.+++.++.++.++++|++.
T Consensus 231 l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~l 284 (633)
T TIGR00805 231 CLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKAL 284 (633)
T ss_pred HHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 211 1256678888888777766667777654
No 223
>KOG3810|consensus
Probab=98.51 E-value=3.4e-06 Score=79.61 Aligned_cols=342 Identities=12% Similarity=0.060 Sum_probs=199.4
Q ss_pred HhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHH
Q psy17080 168 VAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGV 247 (565)
Q Consensus 168 ~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~ 247 (565)
++++-++.=.+.|-.-.|++++.-.+.......+.-+.++.+.+=+.-++.|... ....+-++++-+.++|+++.++.+
T Consensus 55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~t-AaEIAYysYIYs~Vd~~~Yqrvt~ 133 (433)
T KOG3810|consen 55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPAT-AAEIAYYSYIYSKVDPEMYKRVTG 133 (433)
T ss_pred HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHH-HHHHhhhheeeeecCHHHHHHHHH
Confidence 4444455556889888899999888888888888889999999999999999984 456778899999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHh-----cchhHHHHHHHHHHHHHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCC
Q psy17080 248 MYLFPVPVGYIAISGIAYYS-----HNWRLLQWVITIPTIFFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKL 322 (565)
Q Consensus 248 ~~~~~~~lG~~~~~~l~~~~-----~~Wr~~~~~~~~~~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~ 322 (565)
...+..-.|...+..++..+ .+++.+-.+......+..+..+++|..+|-+.-+.+.++ ....+..+.+..
T Consensus 134 y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~--~~v~~~e~~~~~-- 209 (433)
T KOG3810|consen 134 YCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDK--ISVGDLEEMNPQ-- 209 (433)
T ss_pred HhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhccccc--ceeccchhcCcc--
Confidence 88888888888777777664 245556666555555566667788877654444433331 111111111110
Q ss_pred chhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHH-HHHHhhhhhhhccCcCCCcHH----HHHHHHHH
Q psy17080 323 PLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWF-SVYLVYYGLVLNLSNIGGDVY----LNTIISGI 397 (565)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 397 (565)
.+..+.++. ....-..++.+..++|.+.+..+--.+... .....+|...++-.-...... ..=.+..+
T Consensus 210 -~~~~~~l~~------~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tl 282 (433)
T KOG3810|consen 210 -ASYMSYLRG------AFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTL 282 (433)
T ss_pred -chhhHHHHH------HHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHH
Confidence 000000000 000011234455666765554443222222 233444544444332221111 11223344
Q ss_pred HHHHHHHHHHHHHhhcCChH--HHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhh
Q psy17080 398 VEFPAIVISIFILLKMGRRR--PLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRN 475 (565)
Q Consensus 398 ~~~~~~~~~~~l~dr~grr~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 475 (565)
.+.++.+..|.+--++.|.. .+..+....+...+.+. ...+.|...+..++.+.......++...-+++....+.-|
T Consensus 283 LGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~-~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~g 361 (433)
T KOG3810|consen 283 LGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMA-QTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFG 361 (433)
T ss_pred HHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhh-cccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhhe
Confidence 55666777777765655542 33333333333333333 4555577777777777777776677766666767777778
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-----------hhhhHHHHHHHHHHHHHHHHhh
Q psy17080 476 LGVGASSVPAGVALILIPYLWHMQSI-----------NIHFPMGLLGVVGVLGGLSVLL 523 (565)
Q Consensus 476 ~~~g~~~~~~~lg~~i~p~i~~~~~~-----------~~~~~~~~~~~~~~i~~~~~~~ 523 (565)
..+|+..+++-+-..+-..+. .+.. -+..-|++.+++.+++..+...
T Consensus 362 LvFGiNTFvAl~lQsilT~iV-vd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 362 LVFGINTFVALILQSILTLIV-VDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred eeeehHHHHHHHHHHhheEEE-EcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 888888776655444433331 1211 1334577788887777665433
No 224
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.51 E-value=1.8e-05 Score=84.63 Aligned_cols=141 Identities=13% Similarity=0.071 Sum_probs=106.7
Q ss_pred eccccccCcchhhHHHHHHHHHHHhhhhhhhhccccc-ccchhhHHHHHHHHHHHHHHHHhcch--------hHHHHHHH
Q psy17080 145 SEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDK-FGRKKALMGSLVFQLVLGVLVAISPW--------FELYLVVR 215 (565)
Q Consensus 145 ~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr-~Grr~~l~~~~~l~~~~~~~~~~~~~--------~~~l~~~r 215 (565)
+.+++ +......+...+....-+..+++|+++|+ +||++.++++.++..++.++.+++.. ....+++-
T Consensus 16 ~~lg~---~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gL 92 (654)
T TIGR00926 16 NFLGF---SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGL 92 (654)
T ss_pred HHcCC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHH
Confidence 34566 55666667777777777888899999996 79999999999999999888876421 23466778
Q ss_pred HHHhhhhhhhHhhhhhhhccccccch---hHHHHHHhhhhhHHHHHHHHHHHHHhc----------chhHHHHHHHHHHH
Q psy17080 216 FFLGFFCVSIVFSGFVLCMELVGGKW---LTIMGVMYLFPVPVGYIAISGIAYYSH----------NWRLLQWVITIPTI 282 (565)
Q Consensus 216 ~l~G~~~~~~~~~~~~~i~e~~~~~~---r~~~~~~~~~~~~lG~~~~~~l~~~~~----------~Wr~~~~~~~~~~~ 282 (565)
.+..+|.|+.-+...+...|.+++++ |.....++..+.++|.++++.+...+. +|...|.+.++..+
T Consensus 93 aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ 172 (654)
T TIGR00926 93 ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMI 172 (654)
T ss_pred HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHH
Confidence 88889999999999999999987543 556677777888888888776665542 48888888777666
Q ss_pred HHHHHh
Q psy17080 283 FFLTLW 288 (565)
Q Consensus 283 ~~~~~~ 288 (565)
+.++.+
T Consensus 173 ia~lvf 178 (654)
T TIGR00926 173 LALIVF 178 (654)
T ss_pred HHHHHH
Confidence 555443
No 225
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.51 E-value=1.2e-06 Score=89.33 Aligned_cols=144 Identities=11% Similarity=-0.012 Sum_probs=105.5
Q ss_pred ccceeeccccccCcchhhHHHHHHHH-HHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHh------cchhHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFL-LGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAI------SPWFELYL 212 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~-lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~------~~~~~~l~ 212 (565)
.+...+|.++ +..+.|++..... .+..++.++.|++.||+|+|+.+..+.++.++..+.... .++...+.
T Consensus 231 ~~~~l~~~G~---s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 231 SKLYLVDAGW---PLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred hhHHHHhcCC---CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 3445566788 7788898888775 467788999999999999999988877665333332221 23334445
Q ss_pred HHHHHHhhhhhhhHhhhhhhhcccccc-chhHHHHHHhhhhhHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHH
Q psy17080 213 VVRFFLGFFCVSIVFSGFVLCMELVGG-KWLTIMGVMYLFPVPVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLT 286 (565)
Q Consensus 213 ~~r~l~G~~~~~~~~~~~~~i~e~~~~-~~r~~~~~~~~~~~~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~ 286 (565)
....+.+++.+...+...+.+.+..++ +++++..++.+....+|..+++.+++.+ .||+..|++.++..++..+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 555666777777778888887777776 8889999999999999999999887765 3678888877766555443
No 226
>KOG0253|consensus
Probab=98.50 E-value=2.8e-07 Score=87.59 Aligned_cols=129 Identities=19% Similarity=0.104 Sum_probs=100.4
Q ss_pred HHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHH
Q psy17080 165 LLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTI 244 (565)
Q Consensus 165 ~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~ 244 (565)
.+.-.-|.++.+.+.||+|||+.+..+.+++++..++.....+-..+.+.-|..-++..+.+.+.++|..|++|.+-|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 34566789999999999999999999999999999988776554444444444445556667888999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHhhhccc
Q psy17080 245 MGVMYLFPVPVGYIAISGIAYYSH-NWRLLQWVITIPTIFFLTLWWIMPE 293 (565)
Q Consensus 245 ~~~~~~~~~~lG~~~~~~l~~~~~-~Wr~~~~~~~~~~~~~~~~~~~~pe 293 (565)
..|.-....-+|.++.|.++.... +-..+..+.+..+++..+...++|-
T Consensus 471 gvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred chhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeee
Confidence 999999999999999999984432 2233445566666777777777773
No 227
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.49 E-value=1.5e-05 Score=81.89 Aligned_cols=147 Identities=11% Similarity=0.033 Sum_probs=94.7
Q ss_pred cCcCCCcH---HHHHHHHHHHHHHHHHHHHHHHh----hcCChHHHHHH-HHHHHHHHHHHhhcCCch------------
Q psy17080 381 LSNIGGDV---YLNTIISGIVEFPAIVISIFILL----KMGRRRPLCLT-TLGAGLACLMTLGFAPGS------------ 440 (565)
Q Consensus 381 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~d----r~grr~~l~~~-~~~~~~~~~~~~~~~~~~------------ 440 (565)
.+.++.+. ........+..++..++.|+++| |+|||+.++.. .....++.+++. +.++.
T Consensus 31 l~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~-~~~~~~~~~~~~~~~~~ 109 (477)
T TIGR01301 31 VQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIG-FAADIGHLFGDNLDKKT 109 (477)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHH-hCchhhhhccccccccc
Confidence 34444443 33444556677788899999999 59999988775 444444444444 32221
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhh--hhHHHHHHHHHHHHHHHHHHHHHHH---H-h--------
Q psy17080 441 -----FITISLAMVGKFAISSSNVIIPIYTAELFPTKMR--NLGVGASSVPAGVALILIPYLWHMQ---S-I-------- 501 (565)
Q Consensus 441 -----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~~~~g~~~~~~~lg~~i~p~i~~~~---~-~-------- 501 (565)
+..++...+..++.....+...++++|+.|+++| +.+.++.+.+..+|+++++.+.... . .
T Consensus 110 ~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~ 189 (477)
T TIGR01301 110 KPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEAC 189 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccc
Confidence 1222233344556666677778999999998865 5788888899999999998873221 1 1
Q ss_pred -----hhhhHHHHHHHHHHHHHHHH-hhcccCC
Q psy17080 502 -----NIHFPMGLLGVVGVLGGLSV-LLLPDTT 528 (565)
Q Consensus 502 -----~~~~~~~~~~~~~~i~~~~~-~~l~et~ 528 (565)
+....|.+.+++.+++.++. +..+|..
T Consensus 190 ~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 190 GVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 34556777666666665554 5567754
No 228
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.47 E-value=1.7e-09 Score=112.48 Aligned_cols=139 Identities=19% Similarity=0.238 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC---chHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP---GSFITISLAMVGKFAISSSNVIIPIYTA 466 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (565)
.......++.++|.++.|++.||+|||+.+.++.++..++.++.. +.+ +.+...+.-++.|++.+...+....++.
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~ 128 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIA-FAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYIS 128 (451)
T ss_pred HHHHHHHhhhccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccc
Confidence 344455677888999999999999999999999999988888887 666 5667777778889999999999999999
Q ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHHHHH-HH----HhhhhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 467 ELFPTKMRNLGVGASSVPAGVALILIPYLWH-MQ----SINIHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 467 e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~-~~----~~~~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
|..|++.|+...++.+....+|..++..+.. .. ...|...+.+..+..++..+...++||+..
T Consensus 129 E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~ 196 (451)
T PF00083_consen 129 EIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPR 196 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999998888888877776621 11 123566666666666666666688999866
No 229
>KOG2532|consensus
Probab=98.46 E-value=2.4e-06 Score=87.68 Aligned_cols=135 Identities=16% Similarity=0.077 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGS-FITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
........+.+++.+.++++.||+|-|+++..+.++.+++.++........ +.++++-++.|++.+..+|....+..+-
T Consensus 77 ~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W 156 (466)
T KOG2532|consen 77 LIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKW 156 (466)
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeE
Confidence 444455677888999999999999999999999999999888887433322 5566777888999999999999999999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHH-H-HHHH-hhhhhHHHHHHHHHHHHHHHHhhc
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYL-W-HMQS-INIHFPMGLLGVVGVLGGLSVLLL 524 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i-~-~~~~-~~~~~~~~~~~~~~~i~~~~~~~l 524 (565)
.|++.|++..++......+|.+++-.+ . +.+. .||...|.+.++++++..++++++
T Consensus 157 ~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 157 APPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888888776433 2 2334 789999999999998887776443
No 230
>PRK09848 glucuronide transporter; Provisional
Probab=98.43 E-value=7.9e-06 Score=84.92 Aligned_cols=114 Identities=11% Similarity=0.026 Sum_probs=91.0
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHhhhhhhhHhhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP--WFELYLVVRFFLGFFCVSIVFSGF 230 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~ 230 (565)
+....++......++.+++.++.++++||+|+|+++.++.++.+++.++..+.+ +++.+++..++.|+|.+...+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~ 341 (448)
T PRK09848 262 TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMW 341 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444445677888999999999999999999999998888877777654 677777788899999999999999
Q ss_pred hhhccccccc-------hhHHHHHHhhhhhHHHHHHHHHHHHH
Q psy17080 231 VLCMELVGGK-------WLTIMGVMYLFPVPVGYIAISGIAYY 266 (565)
Q Consensus 231 ~~i~e~~~~~-------~r~~~~~~~~~~~~lG~~~~~~l~~~ 266 (565)
++..|..+.+ ++|...++.+....+|..+++.+...
T Consensus 342 al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 342 ALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888754 35888889888888888887766543
No 231
>KOG2504|consensus
Probab=98.43 E-value=4.8e-07 Score=93.96 Aligned_cols=152 Identities=16% Similarity=0.155 Sum_probs=135.0
Q ss_pred CcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhccccccc--chhhHHHHHHHHHHHHHHHHhcchhHHHHHHH
Q psy17080 138 SFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFG--RKKALMGSLVFQLVLGVLVAISPWFELYLVVR 215 (565)
Q Consensus 138 ~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~G--rr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r 215 (565)
.+.+...++.+. ++.+.+.+.++..+...++.++.|+++|+.. ++.+..++++..+++.+.+++.++++.++..-
T Consensus 319 ~~l~~~~~~~g~---~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~ 395 (509)
T KOG2504|consen 319 VYLPSYAKSLGL---SSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFS 395 (509)
T ss_pred HHHHHHHhhcCC---ChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 346667778888 8888999999999999999999999999988 56677788888899999999999999999999
Q ss_pred HHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHHHHHhhhc
Q psy17080 216 FFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH----NWRLLQWVITIPTIFFLTLWWIM 291 (565)
Q Consensus 216 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~----~Wr~~~~~~~~~~~~~~~~~~~~ 291 (565)
.+.|++.|.........+.|..+.++-..+.++.....+++.+++|.++..+. +|...|+..++..++....+++.
T Consensus 396 ~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 396 ILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 99999999999999899999999999999999999999999999999988753 58889999888888877777666
Q ss_pred c
Q psy17080 292 P 292 (565)
Q Consensus 292 p 292 (565)
|
T Consensus 476 ~ 476 (509)
T KOG2504|consen 476 R 476 (509)
T ss_pred H
Confidence 6
No 232
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.41 E-value=9.4e-05 Score=75.53 Aligned_cols=58 Identities=17% Similarity=0.087 Sum_probs=48.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 438 PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
++++..++..++.++..|...+....+..+..+++.|..+-.+++.+-.+|-.+|..+
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557777788889999999989999999999999999888888888877777777665
No 233
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.41 E-value=6.6e-06 Score=80.40 Aligned_cols=134 Identities=14% Similarity=0.105 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCch--HHHHHHHHHHHHHHHHHHHHHHHhc
Q psy17080 388 VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGS--FITISLAMVGKFAISSSNVIIPIYT 465 (565)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (565)
..+...+..+...+.++.-+++.||+|.|++...++++..+-++.+....... +..+++.++.+++ +..+.+...++
T Consensus 51 ~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~ 129 (417)
T COG2223 51 KGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNA 129 (417)
T ss_pred HHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccc
Confidence 34555566677778889999999999999999999999888888777333222 3444444444433 44578888999
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhh---hhhHHHHHHHHHHHHHHHHhh
Q psy17080 466 AELFPTKMRNLGVGASSVPAGVALILIPYL--WHMQSIN---IHFPMGLLGVVGVLGGLSVLL 523 (565)
Q Consensus 466 ~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~---~~~~~~~~~~~~~i~~~~~~~ 523 (565)
++.+|++.+|.+.|+.. .+++|..+..++ ......+ +.....+..+..++..+..++
T Consensus 130 s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 130 SFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred cccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 777766554444 1233334 666666666666665555433
No 234
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.39 E-value=9.8e-06 Score=81.38 Aligned_cols=135 Identities=16% Similarity=0.145 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
.+......++..++.++.+++.||+|||+.+.++.++.+++.+.. ..++.+..++..++.+++.+...+....++.|.
T Consensus 38 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~ 115 (355)
T TIGR00896 38 GLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR--SAPGTALLFAGTALIGVGIAIINVLLPSLIKRD 115 (355)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH--HhccHHHHHHHHHHHHHHHHHHhccchHHHHHh
Confidence 344556667788899999999999999999998887776665544 334555555566667777777666666777888
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHHh--hhhhHHHHHHHHHHHHHHHHhhcccCC
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYLW--HMQSI--NIHFPMGLLGVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i~--~~~~~--~~~~~~~~~~~~~~i~~~~~~~l~et~ 528 (565)
+| +.|+++.|+.+....+|..++|.+. ..+.. ++...+.+.+++.++.. ..++|+.+
T Consensus 116 ~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~--~~~~~~~~ 176 (355)
T TIGR00896 116 FP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL--LAWIPQVR 176 (355)
T ss_pred Cc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH--HHHhhhhc
Confidence 86 5789999999998889988888772 22222 25555555554433332 23455544
No 235
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.38 E-value=0.00032 Score=70.97 Aligned_cols=328 Identities=14% Similarity=0.064 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHH------hc--c----hhHHHHHH---HHHHhhhh
Q psy17080 158 SLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVA------IS--P----WFELYLVV---RFFLGFFC 222 (565)
Q Consensus 158 ~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~------~~--~----~~~~l~~~---r~l~G~~~ 222 (565)
+...-.-.+..++.++..|.+.||..|.+++..+.+..-++..+.+ +. . +-+..... -.+.|...
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 120 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIE 120 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHH
Confidence 3344444566778888899999999999998888766544333222 11 1 11222111 11222111
Q ss_pred hhh-Hhhhhhhhccccc------cchhHHHHHHhhhhhHHHHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHH-hhhc
Q psy17080 223 VSI-VFSGFVLCMELVG------GKWLTIMGVMYLFPVPVGYIAISGIAYYSH---NWRLLQWVITIPTIFFLTL-WWIM 291 (565)
Q Consensus 223 ~~~-~~~~~~~i~e~~~------~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~---~Wr~~~~~~~~~~~~~~~~-~~~~ 291 (565)
-.. .....+.=.||+. ++.+.+.++...-.=-+.-+++|.+.+.+. +.+....+.+...++.++. ++++
T Consensus 121 ~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l 200 (432)
T PF06963_consen 121 RLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLL 200 (432)
T ss_pred HHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1111222245542 344455555555444555666676666553 3444444444444443333 2221
Q ss_pred ----ccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHH
Q psy17080 292 ----PESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIW 367 (565)
Q Consensus 292 ----pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 367 (565)
...|. |..+++.++....-... +..+........+... +.-+.....++..+++|.+...+.. .+.+
T Consensus 201 ~~VY~~~P~-L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~w~~Y~~q~vflas~al-alLY 271 (432)
T PF06963_consen 201 ARVYNSVPA-LAVKKRSSESESSSDEE-SSSESSSDPSILKRLW------NPLRTIIRGWRTYFRQPVFLASFAL-ALLY 271 (432)
T ss_pred HHHHHhChH-hcCCCCCcccccccccc-ccccccchhhHHHHHH------HHHHHHhccHHHHHhCHHHHHHHHH-HHHH
Confidence 12222 21221111110000000 0000000000000000 0011123456667777754443333 2333
Q ss_pred HH-HHHhhhhhhhccCcCCCcHHH---HHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH--hhcCCch-
Q psy17080 368 FS-VYLVYYGLVLNLSNIGGDVYL---NTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMT--LGFAPGS- 440 (565)
Q Consensus 368 ~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~--~~~~~~~- 440 (565)
+. ..+...... +....+.+... .-.+.++.++.|+++..++.+|+|..+.-.++......+..+. .++.+..
T Consensus 272 ~TVLsf~~lmt~-yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~ 350 (432)
T PF06963_consen 272 FTVLSFGGLMTA-YLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSP 350 (432)
T ss_pred HHHhcCcHHHHH-HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 32 111111111 12222444333 3335566788899999999999998877666654433222111 1122221
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 441 ------FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 441 ------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
..++....+..+|.=..--....+.+|..|++.||...|+-+...++...+.-.+
T Consensus 351 ~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 351 FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 2333334445555544445667788999999999999999988887776665444
No 236
>KOG2533|consensus
Probab=98.31 E-value=8e-06 Score=84.14 Aligned_cols=141 Identities=14% Similarity=0.048 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17080 388 VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAE 467 (565)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 467 (565)
......++.++.+++.+.++.+.||++-.+.+....++.++..++.. ...+.+..+++-++.|+..+..+|....++..
T Consensus 83 l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~-~~~s~~~~ialr~llGl~es~~wP~~~~~lg~ 161 (495)
T KOG2533|consen 83 LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTA-AVHSFPGLIALRFLLGLFESGGWPGVVAILGN 161 (495)
T ss_pred hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHhcccchHHHHHHHh
Confidence 34555667788889999999999999976666666555555554444 35556778888899999999999999999999
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHHHH--------HHhhhhhHHHHHHHHHHHHHHHH-hhcccCCC
Q psy17080 468 LFPTKMRNLGVGASSVPAGVALILIPYLWHM--------QSINIHFPMGLLGVVGVLGGLSV-LLLPDTTG 529 (565)
Q Consensus 468 ~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~~--------~~~~~~~~~~~~~~~~~i~~~~~-~~l~et~~ 529 (565)
-+.++.|+.-+|+.+....+|++++.++... ...+|++.|++-|++.++.+++. +++|+...
T Consensus 162 wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 162 WYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999999999999999999999999988332 34678999999999988877654 66776433
No 237
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.31 E-value=5.8e-06 Score=81.04 Aligned_cols=124 Identities=14% Similarity=0.097 Sum_probs=95.6
Q ss_pred cccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhH
Q psy17080 147 WDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIV 226 (565)
Q Consensus 147 ~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 226 (565)
+++ +..+.++..+.+..+.++|.++.+++.||+|+|+++..+.++..++.++....++... ...-++.|++.+..+
T Consensus 173 ~g~---s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~ 248 (310)
T TIGR01272 173 LGL---PEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMF 248 (310)
T ss_pred CCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHH
Confidence 577 7788899999999999999999999999999999998888888887766666554433 345668999999999
Q ss_pred hhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc---chhHHHHH
Q psy17080 227 FSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH---NWRLLQWV 276 (565)
Q Consensus 227 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~---~Wr~~~~~ 276 (565)
|...+...+..+++ .+.+.++. ....+|.++.|.+.+.+. +.+..+++
T Consensus 249 P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 249 PTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred HHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 99999998887654 45555664 455678888887665542 45555553
No 238
>KOG0637|consensus
Probab=98.29 E-value=1.2e-06 Score=85.97 Aligned_cols=125 Identities=14% Similarity=0.152 Sum_probs=90.7
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhccccc----ccchhhHHHH-HHHHHHHHHHHHhcchhH-----
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDK----FGRKKALMGS-LVFQLVLGVLVAISPWFE----- 209 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr----~Grr~~l~~~-~~l~~~~~~~~~~~~~~~----- 209 (565)
.+....+.++ +....+.+--+-.+...+.+|+.|..+|| |||||.++.. .++..++.++..++.++.
T Consensus 55 ~tPyl~~lGv---phk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd 131 (498)
T KOG0637|consen 55 LTPYLQSLGV---PHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGD 131 (498)
T ss_pred ccHHHHHcCC---CcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcC
Confidence 5666667777 55555666666677778899999999996 8998876664 555566777777775543
Q ss_pred ------------HHHHHHHHHhhhhhhhHhhhhhhhccccccchhHH-HHHHhhhhhHHHHHHHHHHHHHh
Q psy17080 210 ------------LYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTI-MGVMYLFPVPVGYIAISGIAYYS 267 (565)
Q Consensus 210 ------------~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~-~~~~~~~~~~lG~~~~~~l~~~~ 267 (565)
.++++-.+.=++.......+-+++.|...++++.+ +++++....++|..++..++.+.
T Consensus 132 ~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 132 NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred CcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 33344444445566778888999999998877766 88999888888888887777544
No 239
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.29 E-value=1.4e-05 Score=82.40 Aligned_cols=111 Identities=16% Similarity=0.175 Sum_probs=95.1
Q ss_pred hhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHhhhhhhhHhhhhhhh
Q psy17080 156 LESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP--WFELYLVVRFFLGFFCVSIVFSGFVLC 233 (565)
Q Consensus 156 ~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i 233 (565)
..+....+..++..++.+++++++||+|+|+++..+.++.+++.++..+.+ +.+.+++.-++.|++.+.......+++
T Consensus 261 ~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ 340 (428)
T PF13347_consen 261 LISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAML 340 (428)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccccccccccc
Confidence 346677788999999999999999999999999999999999999988886 999999999999999999999999999
Q ss_pred cccccc-------chhHHHHHHhhhhhHHHHHHHHHHHHH
Q psy17080 234 MELVGG-------KWLTIMGVMYLFPVPVGYIAISGIAYY 266 (565)
Q Consensus 234 ~e~~~~-------~~r~~~~~~~~~~~~lG~~~~~~l~~~ 266 (565)
+|..+. ++.|...+......-+|..+++.+...
T Consensus 341 ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~ 380 (428)
T PF13347_consen 341 ADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGL 380 (428)
T ss_pred ccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 999873 334778888887777777776665443
No 240
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.23 E-value=3.3e-05 Score=80.76 Aligned_cols=114 Identities=9% Similarity=-0.031 Sum_probs=86.3
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHh-----cchhHHHHHHHHHHhhhhhhhHh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAI-----SPWFELYLVVRFFLGFFCVSIVF 227 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~ 227 (565)
+....+++.+...++.+++.+++++++||+|+|+.++.+.++..++.+...+ ..+.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 3445567777777888999999999999999999999888776666555432 34566777778889999999999
Q ss_pred hhhhhhccccc-------cchhHHHHHHhhhhhHHHHHHHHHHHHH
Q psy17080 228 SGFVLCMELVG-------GKWLTIMGVMYLFPVPVGYIAISGIAYY 266 (565)
Q Consensus 228 ~~~~~i~e~~~-------~~~r~~~~~~~~~~~~lG~~~~~~l~~~ 266 (565)
...++++|..+ .+..|...+......-+|..+++.+.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999865 2333667778777777777776655543
No 241
>KOG0252|consensus
Probab=98.22 E-value=9.1e-06 Score=79.99 Aligned_cols=103 Identities=11% Similarity=0.027 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCc---h----HHHHHHHHHHHHHHHHHHHHH
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPG---S----FITISLAMVGKFAISSSNVII 461 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~ 461 (565)
........++.+.|.++.|++.||+|||++....++++.++.++.. +... . +.+...-++.|+++|.-+|..
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~-~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlS 165 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSG-LSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLS 165 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhc-cCCCCCCCcchhhHHHHHHHHhhccccCCCcch
Confidence 3445566678899999999999999999999999988888887554 3211 1 333444567788888889999
Q ss_pred HHhcccccchhhhhhHHHHHHHHHHHHHHHH
Q psy17080 462 PIYTAELFPTKMRNLGVGASSVPAGVALILI 492 (565)
Q Consensus 462 ~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~ 492 (565)
.+.++|....+.||.-.+....+..+|...+
T Consensus 166 AtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 166 ATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred HHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999999998877655555444333
No 242
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.20 E-value=1.1e-05 Score=80.73 Aligned_cols=127 Identities=17% Similarity=0.177 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHhh-cCChHHHHHHHHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhh--h
Q psy17080 400 FPAIVISIFILLK-MGRRRPLCLTTLGAGLACLMTLGFA--PGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKM--R 474 (565)
Q Consensus 400 ~~~~~~~~~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r 474 (565)
-...+++||++|| +|+|+.+..+.++..++.+++. .. .+...+.+.+.+..++.|..=+....+..|++|++. |
T Consensus 75 Y~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~-~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dprr 153 (498)
T COG3104 75 YLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLA-ISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRR 153 (498)
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHh-ccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCccc
Confidence 3467889999999 5999999999999999999988 44 234455555555568888888888999999998765 6
Q ss_pred hhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhcccC
Q psy17080 475 NLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLLPDT 527 (565)
Q Consensus 475 ~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et 527 (565)
..++++..+..++|++++|++ ...+..++...|.+.++-..++.+.+...++.
T Consensus 154 D~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 154 DGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred CCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccch
Confidence 777778888889999999999 44566788888999988888888877666643
No 243
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.15 E-value=3e-05 Score=77.40 Aligned_cols=141 Identities=12% Similarity=0.145 Sum_probs=115.3
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVL 232 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 232 (565)
++...|.+.+...+.-++.-.+..++.+|+|.|+.++++.++.++=.++++++++.+.+.+.+.+.|+-.+........|
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkY 336 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKY 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567888888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccchhHHHHHH-hhhhhHHHHHHHHHHHHHhc---chhHHHHHHHHHHHHHHHH-hhhccc
Q psy17080 233 CMELVGGKWLTIMGVM-YLFPVPVGYIAISGIAYYSH---NWRLLQWVITIPTIFFLTL-WWIMPE 293 (565)
Q Consensus 233 i~e~~~~~~r~~~~~~-~~~~~~lG~~~~~~l~~~~~---~Wr~~~~~~~~~~~~~~~~-~~~~pe 293 (565)
+.+.+|+|..++...+ .+.+..+|..+.+.+++... |.+..|++.+.+.++..++ .+.+++
T Consensus 337 I~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 337 ITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 9999999887776666 46788888888877776653 6788888888776665555 444443
No 244
>PRK09669 putative symporter YagG; Provisional
Probab=98.13 E-value=4e-05 Score=79.54 Aligned_cols=111 Identities=16% Similarity=0.220 Sum_probs=83.8
Q ss_pred hhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHh--cchhHHHHHHHHHHhhhhhhhHhhhhhhh
Q psy17080 156 LESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAI--SPWFELYLVVRFFLGFFCVSIVFSGFVLC 233 (565)
Q Consensus 156 ~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 233 (565)
..+.+.....++.+++.+++++++||+|+|+.+..+.++.++..+...+ .++.+.+++..++.|++.+...+...+++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666677888899999999999999999999888766654443333 35677788888999999999999999999
Q ss_pred cccccc-------chhHHHHHHhhhhhHHHHHHHHHHHHH
Q psy17080 234 MELVGG-------KWLTIMGVMYLFPVPVGYIAISGIAYY 266 (565)
Q Consensus 234 ~e~~~~-------~~r~~~~~~~~~~~~lG~~~~~~l~~~ 266 (565)
+|..+. +..|...+.......+|..+++.++..
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988852 223566777777777777777666544
No 245
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.11 E-value=0.0002 Score=71.75 Aligned_cols=146 Identities=13% Similarity=0.134 Sum_probs=81.0
Q ss_pred chhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcC--ChH------
Q psy17080 346 QVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIGGDVYLNTIISGIVEFPAIVISIFILLKMG--RRR------ 417 (565)
Q Consensus 346 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~g--rr~------ 417 (565)
.+.+++|-|..+.+.++....=+.....--...+.+-+.|..- -...+..+..++..++.++++-|+. +++
T Consensus 270 ~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEkG~~K-E~LAl~~li~~P~qii~~~~~~Kws~g~~P~~~~~~ 348 (544)
T PF13000_consen 270 SLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEKGLSK-EDLALLVLIDFPFQIILPYYIGKWSAGSPPLDVDNK 348 (544)
T ss_pred HHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHcCCCH-HHhHHHHHHhhhHHHHHHHHhhhhhcCCCccccccc
Confidence 3456677788777766655544443333333333333333322 2233444667777777777776652 221
Q ss_pred -----------------------HHHHHHHHHHHHH----HHHhhcCC-ch-------HHHHHHHHHHHHHHHHHHHHHH
Q psy17080 418 -----------------------PLCLTTLGAGLAC----LMTLGFAP-GS-------FITISLAMVGKFAISSSNVIIP 462 (565)
Q Consensus 418 -----------------------~l~~~~~~~~~~~----~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~ 462 (565)
....++..-.++. .+.. ..| +. ..+++.-++..+.....+....
T Consensus 349 ~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~-~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~ 427 (544)
T PF13000_consen 349 ALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVY-FFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIM 427 (544)
T ss_pred cccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEE-eCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122222111111 1112 223 11 1222233445566666677778
Q ss_pred HhcccccchhhhhhHHHHHHHHHHHHHHHHH
Q psy17080 463 IYTAELFPTKMRNLGVGASSVPAGVALILIP 493 (565)
Q Consensus 463 ~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p 493 (565)
++-+.+..+..-|+.+.+.|+..++|+---.
T Consensus 428 AFharISDP~IGGTYMTLLNTvSNLGGtWP~ 458 (544)
T PF13000_consen 428 AFHARISDPAIGGTYMTLLNTVSNLGGTWPR 458 (544)
T ss_pred HHHhhccCcccchHHHHHHHHHHhcCCCchH
Confidence 8899999999999999999999999975443
No 246
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.09 E-value=1.4e-05 Score=83.23 Aligned_cols=119 Identities=10% Similarity=-0.072 Sum_probs=101.2
Q ss_pred ccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc----------chhHHHHHHH
Q psy17080 146 EWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS----------PWFELYLVVR 215 (565)
Q Consensus 146 ~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~----------~~~~~l~~~r 215 (565)
..++ +....|+......++.+++....+++.+|++.|+++.++.++.+++.+...+. ++.+.++..-
T Consensus 282 ~lG~---s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 282 CLPG---GPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred cCCC---CcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 4666 78889999999999999999999999999999999999999998887654311 3444556667
Q ss_pred HHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh
Q psy17080 216 FFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS 267 (565)
Q Consensus 216 ~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~ 267 (565)
++.+++.+..+....+++.+..|+++++...++.+...++|..+++.++..+
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999998899988888776654
No 247
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.07 E-value=4.1e-05 Score=77.57 Aligned_cols=141 Identities=16% Similarity=0.090 Sum_probs=106.1
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc-chhHHHHH----HHHHHhhhhhhhHh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS-PWFELYLV----VRFFLGFFCVSIVF 227 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~-~~~~~l~~----~r~l~G~~~~~~~~ 227 (565)
+....+.+.++..++=++.-...+++..|+|.|++++++.+..++=..+.++. ++.+...+ ...+.|+..+..+.
T Consensus 241 ~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~ 320 (400)
T PF03825_consen 241 SGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHA 320 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHH
Confidence 34445655666666666777888999999999999999999999999888887 55444333 34579999999999
Q ss_pred hhhhhhccccccchhHHHHHHhhh-hhHHHHHHHHHHHHHhc---------chhHHHHHHHHHHHHHHHH-hhhccc
Q psy17080 228 SGFVLCMELVGGKWLTIMGVMYLF-PVPVGYIAISGIAYYSH---------NWRLLQWVITIPTIFFLTL-WWIMPE 293 (565)
Q Consensus 228 ~~~~~i~e~~~~~~r~~~~~~~~~-~~~lG~~~~~~l~~~~~---------~Wr~~~~~~~~~~~~~~~~-~~~~pe 293 (565)
....++.+..|++.|+++.+++.. ..++|..++..+++.+. +|...+.+.+...++..++ +.+.+|
T Consensus 321 a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 321 ASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999998875 46788888888877653 3455566655554444444 334444
No 248
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.97 E-value=0.00031 Score=68.58 Aligned_cols=133 Identities=16% Similarity=0.082 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC--chHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP--GSFITISLAMVGKFAISSSNVIIPIYTAE 467 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 467 (565)
+.....-.+.....+..+++.+|+|+|+-++.++.+.++++.++.-... +...+....++.+.+.+..-+....++..
T Consensus 52 liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~ 131 (422)
T COG0738 52 LIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTL 131 (422)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHH
Confidence 3334444556677888899999999999999999999999988752211 22444555677788888888888899999
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHH-------------------HhhhhhHHHHHHHHHHHHHHHHh
Q psy17080 468 LFPTKMRNLGVGASSVPAGVALILIPYL--WHMQ-------------------SINIHFPMGLLGVVGVLGGLSVL 522 (565)
Q Consensus 468 ~~p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~-------------------~~~~~~~~~~~~~~~~i~~~~~~ 522 (565)
+.|++..+.-+.+...++.+|.+++|.+ .... ......++...+...++..+...
T Consensus 132 lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~ 207 (422)
T COG0738 132 LGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLIL 207 (422)
T ss_pred hCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 9999887888899999999999999988 1111 11245567777666665555443
No 249
>KOG4686|consensus
Probab=97.97 E-value=2.7e-05 Score=71.64 Aligned_cols=144 Identities=15% Similarity=0.017 Sum_probs=104.4
Q ss_pred ceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHH-HHHHHhcchhHHHHHHHHHHhh
Q psy17080 142 TIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVL-GVLVAISPWFELYLVVRFFLGF 220 (565)
Q Consensus 142 ~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~-~~~~~~~~~~~~l~~~r~l~G~ 220 (565)
-.++.|++ ++...+-+.+....-.++.+++.|.++|++||+...+.+..+..+. -....| +++.=.++..+.|+
T Consensus 290 fF~~rfGl---S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGL 364 (459)
T KOG4686|consen 290 FFQKRFGL---SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGL 364 (459)
T ss_pred HHHHhhCC---ChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhh
Confidence 35678999 7777788888888888999999999999999998877765554433 333333 23333466778888
Q ss_pred hhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc------chhHHHHH-HHHHHHHHHHHhhh
Q psy17080 221 FCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH------NWRLLQWV-ITIPTIFFLTLWWI 290 (565)
Q Consensus 221 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~------~Wr~~~~~-~~~~~~~~~~~~~~ 290 (565)
............++..+|.++.|.+.+..+...++|..+.+.+++.+. +|--.|.+ .+..++....+.+.
T Consensus 365 sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 365 SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFY 441 (459)
T ss_pred hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhh
Confidence 876666556677888888899999999999999999999999988863 24334433 44445555444443
No 250
>KOG3574|consensus
Probab=97.95 E-value=0.00036 Score=67.14 Aligned_cols=285 Identities=11% Similarity=-0.004 Sum_probs=145.6
Q ss_pred hhhhcccc-----cccchhhHHH-HHHHHHHHHHHHHhc-----------chhHHHHHHHHHHhhhhhhhHhhhhhhhcc
Q psy17080 173 FFSGLVSD-----KFGRKKALMG-SLVFQLVLGVLVAIS-----------PWFELYLVVRFFLGFFCVSIVFSGFVLCME 235 (565)
Q Consensus 173 ~~~G~l~D-----r~Grr~~l~~-~~~l~~~~~~~~~~~-----------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e 235 (565)
+++.++.| |+||||..+. +..+.+....+.+.- ++...+....++.-+..+.--.+.-.+...
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALt 160 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALT 160 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 46778888 9999986554 333333333333321 344445556677777777777888888888
Q ss_pred ccccchhHHHHHHhhhhhHHHHHHHHHHHHH----------hcchh---------HHHHHHHHHHHHHHHHhhhcccchh
Q psy17080 236 LVGGKWLTIMGVMYLFPVPVGYIAISGIAYY----------SHNWR---------LLQWVITIPTIFFLTLWWIMPESPR 296 (565)
Q Consensus 236 ~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~----------~~~Wr---------~~~~~~~~~~~~~~~~~~~~pesp~ 296 (565)
+..+++.|-++....++...|.+++..+... +.+|. ...+..+...++...+..+..+++.
T Consensus 161 mLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~ 240 (510)
T KOG3574|consen 161 MLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEND 240 (510)
T ss_pred hcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 8889999999988888888888887654322 12332 1223334444444444444333321
Q ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhh
Q psy17080 297 WLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYG 376 (565)
Q Consensus 297 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (565)
.- .++ +.+...++...-++++++-|..+....+....=......--.
T Consensus 241 ~~---------------------------~~~------e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~ 287 (510)
T KOG3574|consen 241 ES---------------------------VDE------ELELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADAL 287 (510)
T ss_pred hh---------------------------hhh------hhhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhc
Confidence 00 000 000000011113456666666665555444332222222222
Q ss_pred hhhccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcC--ChHH--------HHHHHHHHHHHHHHH-hhcCC-c-h---
Q psy17080 377 LVLNLSNIGGDVYLNTIISGIVEFPAIVISIFILLKMG--RRRP--------LCLTTLGAGLACLMT-LGFAP-G-S--- 440 (565)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~g--rr~~--------l~~~~~~~~~~~~~~-~~~~~-~-~--- 440 (565)
.++..-+.|...... .+..+..++..++.++..-|+. .|++ ..+.......+.... ..+.. . .
T Consensus 288 t~LkLle~Gv~ke~L-al~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~ 366 (510)
T KOG3574|consen 288 TSLKLLEHGVPKEEL-ALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPR 366 (510)
T ss_pred cchHHHHcCCChhHh-eeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceee
Confidence 222222333222111 1222455566666666555542 2221 111111111111111 10111 0 0
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHH
Q psy17080 441 ---FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALIL 491 (565)
Q Consensus 441 ---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i 491 (565)
...+....+..+.....+-..+++.+.+.++...|+.+.+.|+..++|+--
T Consensus 367 ~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~w 420 (510)
T KOG3574|consen 367 GYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNW 420 (510)
T ss_pred chHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCc
Confidence 112222334455555556677788999999999999999999999988643
No 251
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.88 E-value=0.00012 Score=62.84 Aligned_cols=107 Identities=9% Similarity=0.000 Sum_probs=88.4
Q ss_pred HHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhcccccc
Q psy17080 160 AEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGG 239 (565)
Q Consensus 160 ~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~ 239 (565)
..++.+....+++++.+.+.+++|.|+.++++.+...+-.... +-++.+.++.+-.+.|++.+..+.....++.+...+
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 3445556667777788889999999999999999887554443 457788999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhhHHHHHHHHHHHHHh
Q psy17080 240 KWLTIMGVMYLFPVPVGYIAISGIAYYS 267 (565)
Q Consensus 240 ~~r~~~~~~~~~~~~lG~~~~~~l~~~~ 267 (565)
+.|++..+++......+.++|..+....
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888888888777666553
No 252
>KOG3762|consensus
Probab=97.87 E-value=2.2e-05 Score=78.90 Aligned_cols=133 Identities=11% Similarity=-0.027 Sum_probs=105.9
Q ss_pred hHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccc
Q psy17080 157 ESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMEL 236 (565)
Q Consensus 157 ~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~ 236 (565)
-|........|-++.-++.+++..++|+-+++..++....+=.+..++.+|.|+.+..-+++|+..+..+..+.+|+...
T Consensus 408 fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~v 487 (618)
T KOG3762|consen 408 FGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHV 487 (618)
T ss_pred eeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444455556666777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHhhh-----hhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhh
Q psy17080 237 VGGKWLTIMGVMYLF-----PVPVGYIAISGIAYYSHNWRLLQWVITIPTIFFLTLWWI 290 (565)
Q Consensus 237 ~~~~~r~~~~~~~~~-----~~~lG~~~~~~l~~~~~~Wr~~~~~~~~~~~~~~~~~~~ 290 (565)
.||+.|..+.++.+. +-++|.++|+.+...+ +-|..|.+.++.+++.+++...
T Consensus 488 aPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-g~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 488 APPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-GARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred CCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee-hhHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887653 4455555544443332 5677888888777776655443
No 253
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.86 E-value=1.2e-05 Score=60.41 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=66.1
Q ss_pred CcccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHH
Q psy17080 138 SFGHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYL 212 (565)
Q Consensus 138 ~~~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~ 212 (565)
...|.+++|.++ +..+.|++.+..++||.+|++....+.++..+++.+..+++...+..+.+++.++.+.+.
T Consensus 13 plLP~M~~~~~l---s~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 13 PLLPLMQADGGL---SLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred hHhHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 347899999999 999999999999999999999999999998889999999999999999999998877653
No 254
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.83 E-value=0.0003 Score=71.11 Aligned_cols=113 Identities=18% Similarity=0.088 Sum_probs=89.8
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHhhhhhhhHhhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP--WFELYLVVRFFLGFFCVSIVFSGF 230 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~ 230 (565)
++....+.......+.+++.+++..+++|+|+|+++..+.++.+++.++.-+.+ +.+.+++..++.+++.+...+...
T Consensus 270 ~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~w 349 (467)
T COG2211 270 PELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPW 349 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccH
Confidence 344556677777777788899999999999999999999999999999988875 788889999999999999999999
Q ss_pred hhhcccccc-------chhHHHHHHhhhhhHHHHHHHHHHHH
Q psy17080 231 VLCMELVGG-------KWLTIMGVMYLFPVPVGYIAISGIAY 265 (565)
Q Consensus 231 ~~i~e~~~~-------~~r~~~~~~~~~~~~lG~~~~~~l~~ 265 (565)
++++|..+- +.-|...+......=+|..++..+..
T Consensus 350 am~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g 391 (467)
T COG2211 350 AMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPG 391 (467)
T ss_pred HHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999888752 22266666666666666666554433
No 255
>PRK11462 putative transporter; Provisional
Probab=97.80 E-value=0.00062 Score=70.83 Aligned_cols=109 Identities=13% Similarity=0.101 Sum_probs=70.4
Q ss_pred hhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcc--hhHHHHHHHHHHhhhhhhhHhhhhhhh
Q psy17080 156 LESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISP--WFELYLVVRFFLGFFCVSIVFSGFVLC 233 (565)
Q Consensus 156 ~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i 233 (565)
..+.+.+.+.++.+++.+++++++||+|+|+++..+..+.++..++..+.+ +...+++.-++.|++.+...+...+++
T Consensus 264 ~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ 343 (460)
T PRK11462 264 VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMM 343 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788888999999999999999999987766555444444443332 233444555677888777777667777
Q ss_pred ccccc-------cchhHHHHHHhhhhhHHHHHHHHHHH
Q psy17080 234 MELVG-------GKWLTIMGVMYLFPVPVGYIAISGIA 264 (565)
Q Consensus 234 ~e~~~-------~~~r~~~~~~~~~~~~lG~~~~~~l~ 264 (565)
.|..+ .+.-|...+......-+|..+++.++
T Consensus 344 ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~ 381 (460)
T PRK11462 344 SDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALI 381 (460)
T ss_pred HHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 77665 22224545555555555555555443
No 256
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.76 E-value=0.00031 Score=67.59 Aligned_cols=145 Identities=12% Similarity=0.021 Sum_probs=110.5
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccc-cchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKF-GRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFL 218 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~-Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~ 218 (565)
.|.|..|-++ ++.+.|++.+...+..+..++....+++|. .+|+..+...+++.++.+.+.+.+.-..+.. -++.
T Consensus 231 LP~ili~~G~---sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~ll 306 (395)
T COG2807 231 LPAILIDRGL---SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLL 306 (395)
T ss_pred HHHHHHHcCC---CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHH
Confidence 7999999999 899999999999999999999999999964 5777777888888888888878765444444 4999
Q ss_pred hhhhhhhHhhhhhhhccccccchh-HHHHHHhhhhhHHHHHHHHHHHHHh----cchhHHHHHHHHHHHHHHHHh
Q psy17080 219 GFFCVSIVFSGFVLCMELVGGKWL-TIMGVMYLFPVPVGYIAISGIAYYS----HNWRLLQWVITIPTIFFLTLW 288 (565)
Q Consensus 219 G~~~~~~~~~~~~~i~e~~~~~~r-~~~~~~~~~~~~lG~~~~~~l~~~~----~~Wr~~~~~~~~~~~~~~~~~ 288 (565)
|+|.|+.++.+.+++.+-.+..++ +...++.+....+=..++|.+.+++ .+|+...+......+...+.-
T Consensus 307 G~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 307 GLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred hCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988765544 4444554443333334467666664 489998887776666655543
No 257
>KOG2816|consensus
Probab=97.74 E-value=0.00035 Score=71.57 Aligned_cols=132 Identities=20% Similarity=0.258 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhh
Q psy17080 394 ISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKM 473 (565)
Q Consensus 394 ~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 473 (565)
..++..++.+...|.++||+|||..+....+...+..+.+. +.. ++..+ ..-...+....+....+++++....+.
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~-~~~--~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~ 145 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLL-FQG--YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEE 145 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHH-HHH--HHHhh-hcccccchhhhhhhhhhheeeccchhH
Confidence 34667778888999999999999999888877766665555 222 22222 222334445567888899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHH-HhhcccCCC
Q psy17080 474 RNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLS-VLLLPDTTG 529 (565)
Q Consensus 474 r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~-~~~l~et~~ 529 (565)
|....|+.+.....+..++|.+ ......+...++.+..+..+++.+. .+++||+..
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccC
Confidence 9999999999888888899988 3345567777888888877777664 477899876
No 258
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.66 E-value=0.00085 Score=62.60 Aligned_cols=92 Identities=12% Similarity=0.082 Sum_probs=66.9
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCc------hHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhh
Q psy17080 403 IVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPG------SFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNL 476 (565)
Q Consensus 403 ~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 476 (565)
.++.|.+.|++|.+.++.++.+...++...+.....+ .|...+..++.+.+.+...........+.||. .||+
T Consensus 53 G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~ 131 (250)
T PF06813_consen 53 GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGT 131 (250)
T ss_pred cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCc
Confidence 4778999999999999999999888888776633221 14444444555555544445555666688985 7999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy17080 477 GVGASSVPAGVALILIPYL 495 (565)
Q Consensus 477 ~~g~~~~~~~lg~~i~p~i 495 (565)
+.|+.-....+++.+...+
T Consensus 132 vvgilk~~~GLSaai~t~i 150 (250)
T PF06813_consen 132 VVGILKGFFGLSAAIFTQI 150 (250)
T ss_pred eehhhhHHHHhHHHHHHHH
Confidence 9999988888888877666
No 259
>KOG2325|consensus
Probab=97.65 E-value=0.00035 Score=70.87 Aligned_cols=140 Identities=16% Similarity=0.169 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCC-hHHHHHHHHHHHHHHHHHhhc--CCch--HHHHHHHHHHHHHHHHHHHHHHH
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGR-RRPLCLTTLGAGLACLMTLGF--APGS--FITISLAMVGKFAISSSNVIIPI 463 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~gr-r~~l~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 463 (565)
++......++..++.++.++...|.+. |+.++.+.+++.++.++...+ .++. +..++.-++.|++.+.. ...-.
T Consensus 74 G~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~ 152 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRA 152 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHH
Confidence 345555677888889999999999886 888889999999988887322 2332 45555556666665543 66778
Q ss_pred hcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH----HHH-----------hhhhhHHHHHHHHHHHHHHHH-hhcccC
Q psy17080 464 YTAELFPTKMRNLGVGASSVPAGVALILIPYLWH----MQS-----------INIHFPMGLLGVVGVLGGLSV-LLLPDT 527 (565)
Q Consensus 464 ~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~----~~~-----------~~~~~~~~~~~~~~~i~~~~~-~~l~et 527 (565)
|++...-.+.|.++++..+....+|.++||.+.. +.. ..+..+-++.+++.++..++. ++++|.
T Consensus 153 Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 153 YIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred HHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 8888777778888888887777777777777611 111 124567788888888777654 566665
Q ss_pred CC
Q psy17080 528 TG 529 (565)
Q Consensus 528 ~~ 529 (565)
..
T Consensus 233 ~~ 234 (488)
T KOG2325|consen 233 YR 234 (488)
T ss_pred cc
Confidence 44
No 260
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.62 E-value=0.01 Score=57.67 Aligned_cols=138 Identities=14% Similarity=0.082 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhc-c--
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYT-A-- 466 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 466 (565)
..+....+...+...+.|.+.||+|||+..+...++.+++|+.-. .++.+..++.-+++|++.+..++..-++. .
T Consensus 73 ~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~--~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh 150 (354)
T PF05631_consen 73 ILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH--SSNYPVLLLGRVLGGIATSLLFSAFESWMVHEH 150 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333445566777888999999999999988888888887543 45556667777788888877777654432 2
Q ss_pred --cccchhhhhhHHHHHH-HHHHHHHHHHHHH--HHHH--HhhhhhHHHHHHHHHHHHHHHHh-hcccCCC
Q psy17080 467 --ELFPTKMRNLGVGASS-VPAGVALILIPYL--WHMQ--SINIHFPMGLLGVVGVLGGLSVL-LLPDTTG 529 (565)
Q Consensus 467 --e~~p~~~r~~~~g~~~-~~~~lg~~i~p~i--~~~~--~~~~~~~~~~~~~~~~i~~~~~~-~l~et~~ 529 (565)
.-+|.+..+..++... ..+.+-.+++..+ ...+ ..+...||.....+.++++++.. ..+|..+
T Consensus 151 ~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 151 NKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred HHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCC
Confidence 3456666566555444 2333334444444 1223 33557889888888887777653 4566544
No 261
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.62 E-value=0.034 Score=57.53 Aligned_cols=240 Identities=14% Similarity=0.078 Sum_probs=125.7
Q ss_pred hHHHHHHHHH-HHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc---------chh------------------
Q psy17080 157 ESLAEMVFLL-GVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS---------PWF------------------ 208 (565)
Q Consensus 157 ~~l~~s~~~l-g~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~---------~~~------------------ 208 (565)
+..+-....+ +..+...+..++++|++|.+++-+....+.....+.++. ++.
T Consensus 60 I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~ 139 (491)
T PF03219_consen 60 IPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIA 139 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHH
Confidence 3444443333 344556678999999999998887776666555555542 111
Q ss_pred ----HHHHHHHHHHhhhhhhhHh-hhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhcc------------hh
Q psy17080 209 ----ELYLVVRFFLGFFCVSIVF-SGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSHN------------WR 271 (565)
Q Consensus 209 ----~~l~~~r~l~G~~~~~~~~-~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~~------------Wr 271 (565)
|.+.+.-++.-+-...... .-..+.+|.++.++-.+..+++..+.++|.++++.+...+.. |.
T Consensus 140 ~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~ 219 (491)
T PF03219_consen 140 MFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWE 219 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHh
Confidence 1111112222222122222 346778999999999999999999999999998876655432 44
Q ss_pred HHHH-HHHHH---HHHHHHHhhhcccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHHHHhhhhccccCcccch
Q psy17080 272 LLQW-VITIP---TIFFLTLWWIMPESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLKESVLSTNQDVGKKVQV 347 (565)
Q Consensus 272 ~~~~-~~~~~---~~~~~~~~~~~pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (565)
.... +.++. +++.......+.+. -. .++.........++++.+..-..++
T Consensus 220 ~~l~~l~~~v~~~g~~i~~~~~~~~~~-------vl-------------------~~~~~~~~~~~~kk~k~k~s~~es~ 273 (491)
T PF03219_consen 220 LSLNSLMGIVLILGIVIILLYRYMNKN-------VL-------------------TDPRFYPSAKKKKKKKPKMSLKESF 273 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------cc-------------------CccccchhhhcccccCCCccHHHHH
Confidence 3222 12121 22222222222110 00 0000000000001111111223456
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCCC--cH-----HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHH
Q psy17080 348 MDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIGG--DV-----YLNTIISGIVEFPAIVISIFILLKMGRRRPLC 420 (565)
Q Consensus 348 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~ 420 (565)
+.++|+|.++...+..........++.+...-.....-. +. +......++..++..++++.+.+|+|-+....
T Consensus 274 k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~Al 353 (491)
T PF03219_consen 274 KLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAAL 353 (491)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 778899988877777666666666555433222211111 11 12233456666666788889999999877655
Q ss_pred HH
Q psy17080 421 LT 422 (565)
Q Consensus 421 ~~ 422 (565)
+.
T Consensus 354 it 355 (491)
T PF03219_consen 354 IT 355 (491)
T ss_pred Hh
Confidence 54
No 262
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.48 E-value=0.15 Score=51.71 Aligned_cols=254 Identities=13% Similarity=0.075 Sum_probs=139.9
Q ss_pred eeeccccccCcchhhHHHHHHHHH-HHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhc---------ch-----
Q psy17080 143 IISEWDLVCSNSSLESLAEMVFLL-GVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAIS---------PW----- 207 (565)
Q Consensus 143 i~~~~~l~c~~~~~~~l~~s~~~l-g~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~---------~~----- 207 (565)
+.+.+-++-..+..++++-+..-+ +.++..++.+++.+++-|.+++-..+..+....+++++. ++
T Consensus 49 lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~ 128 (509)
T COG3202 49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSR 128 (509)
T ss_pred hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHH
Confidence 333344432355666777777777 777888999999999999999888777777766666653 11
Q ss_pred -----h-------------HHHHHHHHHHhhhhhhhHh-hhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc
Q psy17080 208 -----F-------------ELYLVVRFFLGFFCVSIVF-SGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH 268 (565)
Q Consensus 208 -----~-------------~~l~~~r~l~G~~~~~~~~-~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~ 268 (565)
. |...+.-.+.=+-...... .-.....|.+..++-.|..++++++.+++.++++.+...+.
T Consensus 129 ~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 129 DLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 1122222222221112221 23456788888888899999999999999999888887765
Q ss_pred chhH-------------HHHHHHHHHHHHHHHhhhc----ccchhHHHhcCCHHHHHHHHHHHHHHcCCCCchhHHHHHH
Q psy17080 269 NWRL-------------LQWVITIPTIFFLTLWWIM----PESPRWLVSMGRNKEAMKILGDAAKFNSRKLPLNLEKLLK 331 (565)
Q Consensus 269 ~Wr~-------------~~~~~~~~~~~~~~~~~~~----pesp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 331 (565)
.||. .+.+.++.+++.+.+.+++ ++.|+....+.+
T Consensus 209 k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~---------------------------- 260 (509)
T COG3202 209 KHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKK---------------------------- 260 (509)
T ss_pred hchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhc----------------------------
Confidence 5443 2333333334444443332 222322100000
Q ss_pred HHhhhhccccCcccchhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCC--C---cHH--HHHHHHHHH-HHHHH
Q psy17080 332 ESVLSTNQDVGKKVQVMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIG--G---DVY--LNTIISGIV-EFPAI 403 (565)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~--~~~~~~~~~-~~~~~ 403 (565)
+.+++..+..-..+++.+.|+|.++...+...+...+..+....---...... . +.+ ....+.++. .+...
T Consensus 261 -kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~ 339 (509)
T COG3202 261 -KKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFL 339 (509)
T ss_pred -ccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111112234566778888877777666666655554432211111110 1 111 123344554 45566
Q ss_pred HHHHHHHhhcCChHHHHHHHHH
Q psy17080 404 VISIFILLKMGRRRPLCLTTLG 425 (565)
Q Consensus 404 ~~~~~l~dr~grr~~l~~~~~~ 425 (565)
.+++-+++|.|-....++.-++
T Consensus 340 ~~~s~~ir~~GW~~~AlitPiv 361 (509)
T COG3202 340 FPGSNLIRRVGWFTGALITPLV 361 (509)
T ss_pred hhhHHHHHHhhHHHHHHHHHHH
Confidence 7788888888876655444333
No 263
>KOG1237|consensus
Probab=97.42 E-value=0.024 Score=59.94 Aligned_cols=144 Identities=10% Similarity=0.056 Sum_probs=102.3
Q ss_pred ceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhccccc-ccchhhHHHHHHHHHHHHHHHHhcch-------------
Q psy17080 142 TIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDK-FGRKKALMGSLVFQLVLGVLVAISPW------------- 207 (565)
Q Consensus 142 ~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr-~Grr~~l~~~~~l~~~~~~~~~~~~~------------- 207 (565)
-+..+++. ....+.-..+.+.-......+.+++++|- +||-+++.++.++..++.++..++..
T Consensus 63 ylt~~~~~---~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~ 139 (571)
T KOG1237|consen 63 YLTLELHA---SGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKP 139 (571)
T ss_pred HHHHHhcc---chHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCC
Confidence 34455555 44555666777777777888999999996 69999999998888887655444311
Q ss_pred ------------hHHHHHHHHHHhhhhhhhHhhhhhhhccccc---cchh---HHHHHHhhhhhHHHHHHHHHHHHHh--
Q psy17080 208 ------------FELYLVVRFFLGFFCVSIVFSGFVLCMELVG---GKWL---TIMGVMYLFPVPVGYIAISGIAYYS-- 267 (565)
Q Consensus 208 ------------~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~---~~~r---~~~~~~~~~~~~lG~~~~~~l~~~~-- 267 (565)
...++.+.-+..+|.|+.-+...++-+|-++ ++++ ...+.++.....+|.+++-.+..+.
T Consensus 140 ~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~ 219 (571)
T KOG1237|consen 140 GGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD 219 (571)
T ss_pred CCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 1256677788888999999999999999988 3322 3556777778888888876555554
Q ss_pred -cchhHHHHHHHHHHHHHHHHh
Q psy17080 268 -HNWRLLQWVITIPTIFFLTLW 288 (565)
Q Consensus 268 -~~Wr~~~~~~~~~~~~~~~~~ 288 (565)
.+|.+.|.+..+..++.++++
T Consensus 220 ~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 220 NVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred cccceeeccHHHHHHHHHHHHH
Confidence 489988887666555444443
No 264
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.41 E-value=0.0043 Score=61.24 Aligned_cols=119 Identities=11% Similarity=0.053 Sum_probs=97.9
Q ss_pred eccccccCcchhhHHHHHHHHHHHhhhhhhhhcccc-cccchhhHHHHHHHHHHHHHHHH---hcchhHHHHHHHHHHhh
Q psy17080 145 SEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSD-KFGRKKALMGSLVFQLVLGVLVA---ISPWFELYLVVRFFLGF 220 (565)
Q Consensus 145 ~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~D-r~Grr~~l~~~~~l~~~~~~~~~---~~~~~~~l~~~r~l~G~ 220 (565)
+-|++ +..+..-++..+..|..+|-...|++.. |.++|+...+++.+..++..+.. ...+.+.+...-++.|+
T Consensus 237 ~Vfgm---sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~ 313 (403)
T PF03209_consen 237 EVFGM---SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGL 313 (403)
T ss_pred HHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 44778 6666777889999999999999998887 67888888888877777666544 44678899999999999
Q ss_pred hhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHH
Q psy17080 221 FCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY 266 (565)
Q Consensus 221 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~ 266 (565)
+.|.......+.+.+...+++-|..++.+.....++.-++..++..
T Consensus 314 g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~ 359 (403)
T PF03209_consen 314 GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGA 359 (403)
T ss_pred hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988777777666666554
No 265
>KOG1479|consensus
Probab=97.34 E-value=0.023 Score=56.33 Aligned_cols=59 Identities=12% Similarity=-0.054 Sum_probs=45.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 437 APGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
..+++..+....+.++..|-..+....++.+..|++.+..+-.+...+-..|-+.|..+
T Consensus 340 ~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 340 FESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred ecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 44557778888888898888888899999999999887777666666666665555544
No 266
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.28 E-value=0.0065 Score=61.33 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=79.4
Q ss_pred hhHHHHHHHHHHHHHHHHhc---ch------hHHHHHHHHHHhhhhhhhHhhhhhhhccccccc---hhHHHHHHhhhhh
Q psy17080 186 KALMGSLVFQLVLGVLVAIS---PW------FELYLVVRFFLGFFCVSIVFSGFVLCMELVGGK---WLTIMGVMYLFPV 253 (565)
Q Consensus 186 ~~l~~~~~l~~~~~~~~~~~---~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~---~r~~~~~~~~~~~ 253 (565)
|+++++.++..+|.++..++ .+ .+.++++.++.++|.|+.-+...++++|.++++ +|.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56778888888888884433 22 267899999999999999999999999999865 4566778888999
Q ss_pred HHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHhh
Q psy17080 254 PVGYIAISGIAYYS---HNWRLLQWVITIPTIFFLTLWW 289 (565)
Q Consensus 254 ~lG~~~~~~l~~~~---~~Wr~~~~~~~~~~~~~~~~~~ 289 (565)
++|.+++..+..++ .+|.+.|.+.++..++.++.++
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 99999987766554 4888889888777666655543
No 267
>KOG2563|consensus
Probab=97.10 E-value=0.03 Score=55.83 Aligned_cols=107 Identities=21% Similarity=0.203 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCC----chHHHHHHHHHHHHHHHHHHHHHHH
Q psy17080 388 VYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAP----GSFITISLAMVGKFAISSSNVIIPI 463 (565)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (565)
..+...+..++.++..+.+.|+.||+|-|..+.++..+.+++..+=.+-.. +.... -+...+....+...+....
T Consensus 81 ~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~-~l~~~Gq~iaa~Aq~Fim~ 159 (480)
T KOG2563|consen 81 ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRR-PLTHTGQSIAAAAQPFILG 159 (480)
T ss_pred HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchh-hhhHHhHHHHHHhhhHhhc
Confidence 345566777888999999999999999999999999988888776542221 21111 2223333333333333332
Q ss_pred ----hcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 464 ----YTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 464 ----~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
...--||+++|+++..+..+.+.+|.+++-++
T Consensus 160 lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 160 LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 33445899999999998888877777766554
No 268
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.06 E-value=0.016 Score=49.85 Aligned_cols=104 Identities=14% Similarity=0.057 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy17080 390 LNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELF 469 (565)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 469 (565)
....+.-....++.++.+.+.+++|.|+.++++.+...+-.... +.++.+..+....+.|++.+..+...-.++.+..
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~--~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF--FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 33444445566777888999999999999999888776544443 4566677777888899999999999889999998
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 470 PTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 470 p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.++.+++-.|+...+...+.++|.++
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 88899999998888888777777766
No 269
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.03 E-value=0.042 Score=54.97 Aligned_cols=126 Identities=12% Similarity=0.059 Sum_probs=82.2
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHH
Q psy17080 402 AIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGAS 481 (565)
Q Consensus 402 ~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~ 481 (565)
..+....+.|.++.|++++...+...+...++. +..+...+-+.-++.|...+. -...++|+--..|++.-.++.+.+
T Consensus 57 ~l~~vflltd~l~Ykpviil~~~~~i~t~~lll-~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~ 134 (412)
T PF01770_consen 57 FLLPVFLLTDYLRYKPVIILQALSYIITWLLLL-FGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYT 134 (412)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH-HHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHH
Confidence 445566788999999999988877776666665 666655555555666555544 345557777777887777777777
Q ss_pred HHHHHHHHHHHHHH----HHHHHhhhhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 482 SVPAGVALILIPYL----WHMQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 482 ~~~~~lg~~i~p~i----~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
....-+|.+++..+ ......++.....+......++.++.+++|..++
T Consensus 135 raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 135 RAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 66655555555444 3334444554445555555566667788888765
No 270
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.95 E-value=0.00084 Score=50.06 Aligned_cols=53 Identities=19% Similarity=0.246 Sum_probs=45.4
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHH
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQ 195 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~ 195 (565)
.+-..++.++ +..++|++.++..+...++++++|.++||+||++.++....+.
T Consensus 23 l~~~~~~~Gl---~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 23 LPLYLKQLGL---SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhHhhhhcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 4555667788 8999999999999999999999999999999998877765543
No 271
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.93 E-value=0.0093 Score=55.02 Aligned_cols=52 Identities=17% Similarity=0.293 Sum_probs=35.1
Q ss_pred chhHHHHHHhhhhhHHHHHHHHHH--HH------HhcchhHHHHHHHHHHHHHHHHhhhc
Q psy17080 240 KWLTIMGVMYLFPVPVGYIAISGI--AY------YSHNWRLLQWVITIPTIFFLTLWWIM 291 (565)
Q Consensus 240 ~~r~~~~~~~~~~~~lG~~~~~~l--~~------~~~~Wr~~~~~~~~~~~~~~~~~~~~ 291 (565)
|+|+..+.+...++++|.++.... .. ...+|++++.+.+++.++-++++..+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567777777788888888874332 11 12479999998888776666655443
No 272
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.77 E-value=0.22 Score=51.41 Aligned_cols=95 Identities=8% Similarity=-0.127 Sum_probs=64.9
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc-CCc-----------------------------hHHHHHHHHHH
Q psy17080 401 PAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF-APG-----------------------------SFITISLAMVG 450 (565)
Q Consensus 401 ~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~-~~~-----------------------------~~~~~~~~~~~ 450 (565)
+..++-+++++|++|++.+.+........++++... .|. .|...++.+..
T Consensus 59 ~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~ 138 (472)
T TIGR00769 59 IFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMA 138 (472)
T ss_pred HHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHH
Confidence 336677899999999988766554444444333311 110 12222333334
Q ss_pred HHHHHHHHH-HHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 451 KFAISSSNV-IIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 451 ~~~~~~~~~-~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
........+ ..+.+++|++..++..+-.++....+++|.+++|.+
T Consensus 139 elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 139 ELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444455 778999999999999999999999999999999987
No 273
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.73 E-value=0.00046 Score=67.52 Aligned_cols=104 Identities=13% Similarity=0.035 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-CChHHHHHHHHHHHHHHH--HHh----------hcCCchHHHHHHHHHHHHHHHHH
Q psy17080 391 NTIISGIVEFPAIVISIFILLKM-GRRRPLCLTTLGAGLACL--MTL----------GFAPGSFITISLAMVGKFAISSS 457 (565)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~l~dr~-grr~~l~~~~~~~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 457 (565)
...+..++.++|+.+..+..-+. .+|++. +..+.-.+..- ++. .+.++++..++.+++.++..|..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34567788889998887643221 233332 22222111111 111 12334566777788888999988
Q ss_pred HHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 458 NVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 458 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.+....+..+..+++.|..+-.+++++-.+|-.+|..+
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp -HHHH---------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999998888888777777766766666554
No 274
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.50 E-value=0.064 Score=57.90 Aligned_cols=125 Identities=7% Similarity=0.102 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHhh-cCChHHHHHHHHHHHHHHHHHhhcC-Cc------hHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q psy17080 399 EFPAIVISIFILLK-MGRRRPLCLTTLGAGLACLMTLGFA-PG------SFITISLAMVGKFAISSSNVIIPIYTAELFP 470 (565)
Q Consensus 399 ~~~~~~~~~~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 470 (565)
.-+..++++++.|+ +||++.+.++.++..++..++.+.. +. ....++.+.+..+|.+..-+...+...+.++
T Consensus 36 ~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~ 115 (654)
T TIGR00926 36 CYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFE 115 (654)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcC
Confidence 34456777888886 7999999999888888877765211 11 1223444556667777777888888888887
Q ss_pred hh---hhhhHHHHHHHHHHHHHHHHHHHH-HHH-Hh-------hhhhHHHHHHHHHHHHHHHHhh
Q psy17080 471 TK---MRNLGVGASSVPAGVALILIPYLW-HMQ-SI-------NIHFPMGLLGVVGVLGGLSVLL 523 (565)
Q Consensus 471 ~~---~r~~~~g~~~~~~~lg~~i~p~i~-~~~-~~-------~~~~~~~~~~~~~~i~~~~~~~ 523 (565)
.+ .|...+.+.....++|+++++.+. ... .. ++...|.+.+++.+++.++...
T Consensus 116 ~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 116 ERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 54 366677778888899998887772 222 21 3666777777777766655443
No 275
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.24 E-value=0.11 Score=53.59 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=91.0
Q ss_pred cCcCCCcHHHHHHHHHHHHHH--HHHHHHHHHhhc-----CChHHHHHHHHHHHHHHHHHhhcCCc----hHHHHHHHHH
Q psy17080 381 LSNIGGDVYLNTIISGIVEFP--AIVISIFILLKM-----GRRRPLCLTTLGAGLACLMTLGFAPG----SFITISLAMV 449 (565)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~dr~-----grr~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 449 (565)
..+++.+......+.++..++ ..++.|.++|-+ +||.-++++.++..++.+.+. ..+. .....+++++
T Consensus 17 ~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~-~~~~~~~s~~~~~~~l~l 95 (433)
T PF03092_consen 17 KDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLA-LLPASESSAAIAVVLLFL 95 (433)
T ss_pred HHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHH-hcccccchhhhHHHHHHH
Confidence 344566666556666666554 467889999976 355556666666655555555 3332 2344445555
Q ss_pred HHHHHHHHHHHHHHhccccc---chhhhhhHHHHHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhhc
Q psy17080 450 GKFAISSSNVIIPIYTAELF---PTKMRNLGVGASSVPAGVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLLL 524 (565)
Q Consensus 450 ~~~~~~~~~~~~~~~~~e~~---p~~~r~~~~g~~~~~~~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~l 524 (565)
..++....-...-+...|.. |.+ |+...+.......+|++++..+ ...+..++...|.+.+.+..+..+..+++
T Consensus 96 a~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~ 174 (433)
T PF03092_consen 96 ASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFL 174 (433)
T ss_pred HHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHh
Confidence 66666666666667777765 434 6777788888888888888766 33455667777888777777666555444
Q ss_pred cc
Q psy17080 525 PD 526 (565)
Q Consensus 525 ~e 526 (565)
.|
T Consensus 175 ~~ 176 (433)
T PF03092_consen 175 LE 176 (433)
T ss_pred hh
Confidence 33
No 276
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.05 E-value=0.5 Score=45.35 Aligned_cols=106 Identities=21% Similarity=0.176 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCc--hHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPG--SFITISLAMVGKFAISSSNVIIPIYTA 466 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (565)
........+....+.++.|.+.||.|||+.+..+.....++.++.. +... .+...+.....+++.+...+....+..
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 120 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLA-LAPNVGLALLLILRLLQGLGGGGLLPVASALLS 120 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHH-hCccchHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3444445555666668999999999999777777654344433333 3333 344444444467777777888899999
Q ss_pred cccch-hhhhhHHHHHHH-HHHHHHHHHHHH
Q psy17080 467 ELFPT-KMRNLGVGASSV-PAGVALILIPYL 495 (565)
Q Consensus 467 e~~p~-~~r~~~~g~~~~-~~~lg~~i~p~i 495 (565)
|..|. ..|+...+.... ...+|..++|.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (338)
T COG0477 121 EWFPEATERGLAVGLVTLGAGALGLALGPLL 151 (338)
T ss_pred HhcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99997 667888888777 566777777755
No 277
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.72 E-value=0.088 Score=52.67 Aligned_cols=111 Identities=14% Similarity=0.087 Sum_probs=82.0
Q ss_pred chhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHH--HH---HHHHHHhcchhHHHHHHHHHHhhhhhhhHhh
Q psy17080 154 SSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQ--LV---LGVLVAISPWFELYLVVRFFLGFFCVSIVFS 228 (565)
Q Consensus 154 ~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~--~~---~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 228 (565)
..+..+...+|.+|..++.--...+ |+ |++.+.+.+-. .+ .....-+.++.|..++.-+..|+..|..++-
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVN 355 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVN 355 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 4556677888888877775433222 34 33333332222 11 2222334689999999999999999999999
Q ss_pred hhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhc
Q psy17080 229 GFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSH 268 (565)
Q Consensus 229 ~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~ 268 (565)
.+..+.|-.++++|...++...++-++|.++++.++..+.
T Consensus 356 tF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 356 TFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998887654
No 278
>PRK03612 spermidine synthase; Provisional
Probab=95.22 E-value=0.33 Score=51.10 Aligned_cols=111 Identities=11% Similarity=0.020 Sum_probs=57.6
Q ss_pred cchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHH-HHHHHH-HHHHHH----Hhcchh-HHHHHHHHHHhhhhhhh
Q psy17080 153 NSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMG-SLVFQL-VLGVLV----AISPWF-ELYLVVRFFLGFFCVSI 225 (565)
Q Consensus 153 ~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~-~~~l~~-~~~~~~----~~~~~~-~~l~~~r~l~G~~~~~~ 225 (565)
+....+++.+++++|..+|+.++|++.++.-|+...+- ...+.+ ++..+. ++...+ ..++..-++.|+..|+.
T Consensus 48 s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~ 127 (521)
T PRK03612 48 SVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGME 127 (521)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567899999999999999999988744333322111 111111 111111 111111 12334456677888888
Q ss_pred HhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHH
Q psy17080 226 VFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIA 264 (565)
Q Consensus 226 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~ 264 (565)
.|....+..+... ++-+...+-......+|.++|+++.
T Consensus 128 ~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~ 165 (521)
T PRK03612 128 IPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAF 165 (521)
T ss_pred HHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHH
Confidence 8887766655432 1122333444444444554444443
No 279
>KOG3098|consensus
Probab=95.20 E-value=0.46 Score=48.57 Aligned_cols=106 Identities=23% Similarity=0.305 Sum_probs=78.9
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhccccc---ccchhhHHHHHHHHHHHHHHHHhc------------------chhHHHHH
Q psy17080 155 SLESLAEMVFLLGVAFGGFFSGLVSDK---FGRKKALMGSLVFQLVLGVLVAIS------------------PWFELYLV 213 (565)
Q Consensus 155 ~~~~l~~s~~~lg~~ig~~~~G~l~Dr---~Grr~~l~~~~~l~~~~~~~~~~~------------------~~~~~l~~ 213 (565)
...++..-...+|..+++.+.+.+++| +||++.+.++.++..++.++.-.+ +++...++
T Consensus 279 ~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~i 358 (461)
T KOG3098|consen 279 YLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALI 358 (461)
T ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHH
Confidence 344444445556666677777777754 899999999999888888776553 24557777
Q ss_pred HHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHH
Q psy17080 214 VRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAIS 261 (565)
Q Consensus 214 ~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~ 261 (565)
.-++.|++.+......+.++.... +++|..+.++.-.-..++..++.
T Consensus 359 i~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 359 IGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHh
Confidence 889999999999999999999999 67777777777766666665543
No 280
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.14 E-value=0.21 Score=37.19 Aligned_cols=59 Identities=24% Similarity=0.228 Sum_probs=39.1
Q ss_pred HHHHHHhhhhhhhccCcCCCcHHHHH---HHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHH
Q psy17080 367 WFSVYLVYYGLVLNLSNIGGDVYLNT---IISGIVEFPAIVISIFILLKMGRRRPLCLTTLG 425 (565)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~ 425 (565)
+......+-..+.+..+.+.+..... .+.-+..+++.++.|.++||.++++.......+
T Consensus 13 f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 13 FAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 33344444345556666676655444 444567788999999999999998877665543
No 281
>PRK03612 spermidine synthase; Provisional
Probab=94.58 E-value=2.6 Score=44.46 Aligned_cols=48 Identities=4% Similarity=-0.083 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 447 AMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.++.++..|..+|...-+..+.... .-+...|-......+|+++|.++
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~~~-~~g~~~g~ly~~ntlGa~~G~l~ 164 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIRDQ-HLGHNVATVLAADYLGALVGGLA 164 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-chhhhhhhhHhHHhHHHHHHHHH
Confidence 3445667777777766555443221 12334454455555555555444
No 282
>KOG3880|consensus
Probab=94.57 E-value=0.17 Score=47.90 Aligned_cols=131 Identities=9% Similarity=0.012 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhcccc
Q psy17080 158 SLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELV 237 (565)
Q Consensus 158 ~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~ 237 (565)
|.+.-+-.+-..+--+.+..+.||+---.=+.+..++.+.+.++.+++++.++-+++-.+..++.|.....-..+-+.+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y- 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY- 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC-
Confidence 3334444455555556666677875332223455667788888999999999988888888888665544433333222
Q ss_pred ccchhHHHHHHhhhhhHHHHHHHHHHHHHhc-----chhHHHHHHH-HHHHHHHHHhhhccc
Q psy17080 238 GGKWLTIMGVMYLFPVPVGYIAISGIAYYSH-----NWRLLQWVIT-IPTIFFLTLWWIMPE 293 (565)
Q Consensus 238 ~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~-----~Wr~~~~~~~-~~~~~~~~~~~~~pe 293 (565)
+ ....+.++.|.+.+.++|+.--..+. +-|...++.. +|++.+...++.+++
T Consensus 144 ~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 144 P----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred C----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 1 22223344444444444433222223 3455566544 444444444444443
No 283
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.32 E-value=0.0073 Score=63.64 Aligned_cols=137 Identities=13% Similarity=0.073 Sum_probs=2.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc--C----------------------C---------
Q psy17080 392 TIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF--A----------------------P--------- 438 (565)
Q Consensus 392 ~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~--~----------------------~--------- 438 (565)
....-++.++..++..++..|..|-+.+.++.++++++++++.+- . .
T Consensus 44 ~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 123 (539)
T PF03137_consen 44 SSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQAS 123 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccccccccccccccccc
Confidence 334445556666667777788778888888999999888876621 0 0
Q ss_pred ----------ch------HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH------H
Q psy17080 439 ----------GS------FITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL------W 496 (565)
Q Consensus 439 ----------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i------~ 496 (565)
.. ..+++..++.|++....+++..+|+-|..+++.-+...|+...+..+|.++|=.+ .
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~ 203 (539)
T PF03137_consen 124 SDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRI 203 (539)
T ss_dssp ----------------------------SSS-------------------------------------------------
T ss_pred CccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhc
Confidence 00 1233344566777788889999999999999999999999888877776655333 1
Q ss_pred --HHHH----------------hhhhhHHHHHHHHHHHHHHHHhhcccCC
Q psy17080 497 --HMQS----------------INIHFPMGLLGVVGVLGGLSVLLLPDTT 528 (565)
Q Consensus 497 --~~~~----------------~~~~~~~~~~~~~~~i~~~~~~~l~et~ 528 (565)
.... ..|+..|++.+++.++.++..+..|+..
T Consensus 204 yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~l 253 (539)
T PF03137_consen 204 YVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKL 253 (539)
T ss_dssp --------------------------------------------------
T ss_pred eeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 0100 1366778888888888887777776643
No 284
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.91 E-value=0.58 Score=47.21 Aligned_cols=107 Identities=11% Similarity=0.064 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHHH--hhcCCch------HHHHHHHHHHHHHHHHHHHHHHHhcccccchh---hhhhHHHHHHHHH
Q psy17080 417 RPLCLTTLGAGLACLMT--LGFAPGS------FITISLAMVGKFAISSSNVIIPIYTAELFPTK---MRNLGVGASSVPA 485 (565)
Q Consensus 417 ~~l~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~g~~~~~~ 485 (565)
+.+.++.++..++.+++ ....+.. ....+.+.+..+|.|..-+....+..|.++++ .|...+.......
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 34556666666666652 2122222 45566666778888888899999999999876 3666777778888
Q ss_pred HHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHHHHHHhh
Q psy17080 486 GVALILIPYL--WHMQSINIHFPMGLLGVVGVLGGLSVLL 523 (565)
Q Consensus 486 ~lg~~i~p~i--~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 523 (565)
++|..+++.+ ..-++.++...|.+.++..+++.+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999998877 3345678888898888888877665544
No 285
>KOG3626|consensus
Probab=92.28 E-value=0.4 Score=51.54 Aligned_cols=133 Identities=13% Similarity=0.062 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc-------------------CC-------------------
Q psy17080 397 IVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF-------------------AP------------------- 438 (565)
Q Consensus 397 ~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~-------------------~~------------------- 438 (565)
++..+......+...|..|-+.+.++.++++++.++.++- .+
T Consensus 143 ig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 222 (735)
T KOG3626|consen 143 IGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPS 222 (735)
T ss_pred cchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCC
Confidence 3444555556677778888888888888888888877621 00
Q ss_pred --------c-h---H-HHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH------HH
Q psy17080 439 --------G-S---F-ITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYLWH------MQ 499 (565)
Q Consensus 439 --------~-~---~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i~~------~~ 499 (565)
. . + .+++..++.|+|....++...+|+-|...++.-...+|+...+..+|.++|=++.. .+
T Consensus 223 ~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD 302 (735)
T KOG3626|consen 223 PENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVD 302 (735)
T ss_pred CCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeec
Confidence 0 0 1 12223344566666667888899999999998899999999888888777655511 11
Q ss_pred H---------------hhhhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 500 S---------------INIHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 500 ~---------------~~~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
- ..|+..|++.+.+.++.++..+++|++..
T Consensus 303 ~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 303 FGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred cccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 1 23677899999999999999999988765
No 286
>KOG3880|consensus
Probab=90.90 E-value=0.98 Score=42.97 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=80.4
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhcccccccchh------hHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhh
Q psy17080 155 SLESLAEMVFLLGVAFGGFFSGLVSDKFGRKK------ALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFS 228 (565)
Q Consensus 155 ~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~------~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 228 (565)
.|.-|.+..|.+|..+..--. |+=|-+ ++..-.+++.+......+.++++..++.-+.-|+-.|..++-
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~-----~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVN 362 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSI-----NLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVN 362 (409)
T ss_pred hcchhhheeeeeeEEEEeccc-----eEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHH
Confidence 345566777766655443222 222222 112223344445556667899999999999999998999998
Q ss_pred hhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhcch
Q psy17080 229 GFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSHNW 270 (565)
Q Consensus 229 ~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~~W 270 (565)
.+--+.+-.++++|-.+++....+-++|..+++.++..+.+|
T Consensus 363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh~~ 404 (409)
T KOG3880|consen 363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLHNW 404 (409)
T ss_pred HHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccchhh
Confidence 888888888999999999999999999999999888776655
No 287
>KOG0637|consensus
Probab=90.82 E-value=0.45 Score=47.82 Aligned_cols=98 Identities=15% Similarity=0.034 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHhh----cCChHHHHHHHH-HHHHHHHHHhhcCCc--------h---------HHHHHHHHHHHHHH
Q psy17080 397 IVEFPAIVISIFILLK----MGRRRPLCLTTL-GAGLACLMTLGFAPG--------S---------FITISLAMVGKFAI 454 (565)
Q Consensus 397 ~~~~~~~~~~~~l~dr----~grr~~l~~~~~-~~~~~~~~~~~~~~~--------~---------~~~~~~~~~~~~~~ 454 (565)
+..++..++.|..+|| +|||+..+.... ...++++++. +..+ . ...++...+.-+..
T Consensus 78 i~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig-~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~ 156 (498)
T KOG0637|consen 78 LSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIG-YAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVAN 156 (498)
T ss_pred cccceecccccccccccccccccccchHHHhhHHHHHHHhhhh-hHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhh
Confidence 3445566777888885 788877665544 4444554443 3211 1 11222223334444
Q ss_pred HHHHHHHHHhcccccchhhhhh-HHHHHHHHHHHHHHHHHHH
Q psy17080 455 SSSNVIIPIYTAELFPTKMRNL-GVGASSVPAGVALILIPYL 495 (565)
Q Consensus 455 ~~~~~~~~~~~~e~~p~~~r~~-~~g~~~~~~~lg~~i~p~i 495 (565)
.......-++..++...+.+.+ +.+....+..+|+.++-.+
T Consensus 157 n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~ 198 (498)
T KOG0637|consen 157 NTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYAL 198 (498)
T ss_pred hhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeec
Confidence 4555666788888887777666 8888888888888776444
No 288
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=90.71 E-value=24 Score=36.92 Aligned_cols=97 Identities=8% Similarity=-0.030 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhc-C-------Cch----------------------HHHHHHHH
Q psy17080 399 EFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGF-A-------PGS----------------------FITISLAM 448 (565)
Q Consensus 399 ~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~-~-------~~~----------------------~~~~~~~~ 448 (565)
.++..++-.++.++++|+++.-+..........+++.+ . ++. |...++.+
T Consensus 72 a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv 151 (491)
T PF03219_consen 72 AILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYV 151 (491)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Confidence 34455667788999999887665544443333333211 1 111 11222222
Q ss_pred HHHHHHHHHHH-HHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 449 VGKFAISSSNV-IIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 449 ~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
..-..-....+ ..+.+++|.++.++..+..++....+++|.++++.+
T Consensus 152 ~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~ 199 (491)
T PF03219_consen 152 MAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQL 199 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333233334 468999999999999999999999999999988777
No 289
>KOG3097|consensus
Probab=89.17 E-value=23 Score=34.46 Aligned_cols=97 Identities=14% Similarity=0.109 Sum_probs=66.5
Q ss_pred HHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhcccccc--chh-
Q psy17080 166 LGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGG--KWL- 242 (565)
Q Consensus 166 lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~--~~r- 242 (565)
+..+..+++.+.+..++|-|+++.++....... +..-+-+.+..++-.-.+.|++.+..+..--+|+++.-.. +.|
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~ 147 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRG 147 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhh
Confidence 344455555568889999999998887766543 2233447788999999999999999998888888777542 223
Q ss_pred ------------HHHHHHhhhhhHHHHHHHHHH
Q psy17080 243 ------------TIMGVMYLFPVPVGYIAISGI 263 (565)
Q Consensus 243 ------------~~~~~~~~~~~~lG~~~~~~l 263 (565)
+....+++....+|.++...+
T Consensus 148 ~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 148 EQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred hhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 334455555556665554433
No 290
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=88.32 E-value=5.7 Score=40.65 Aligned_cols=118 Identities=13% Similarity=-0.089 Sum_probs=85.0
Q ss_pred cccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHh---c---c----hhHHHHHHHH
Q psy17080 147 WDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAI---S---P----WFELYLVVRF 216 (565)
Q Consensus 147 ~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~---~---~----~~~~l~~~r~ 216 (565)
-|+ +...+|..-+.-.+..+.|.+...++.+|+|..+.-+++.........++.. . + +...++.+-.
T Consensus 288 ~G~---s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~ 364 (432)
T PF06963_consen 288 QGY---SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIA 364 (432)
T ss_pred CCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHH
Confidence 366 7788899999999999999999999999999988877776655443333322 2 2 2233444444
Q ss_pred HHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHHh
Q psy17080 217 FLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYS 267 (565)
Q Consensus 217 l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~ 267 (565)
+.=+|.=+.-....-++-|..|+++||...+.-....++-.++...++...
T Consensus 365 ~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 365 LSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444454455666778889999999999999998888777777766655544
No 291
>KOG1479|consensus
Probab=87.50 E-value=5.3 Score=40.00 Aligned_cols=114 Identities=13% Similarity=0.042 Sum_probs=81.6
Q ss_pred cchhhHHHHHH-HHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHH-------HhcchhHHHHHHHHHHhhhhhh
Q psy17080 153 NSSLESLAEMV-FLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLV-------AISPWFELYLVVRFFLGFFCVS 224 (565)
Q Consensus 153 ~~~~~~l~~s~-~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~-------~~~~~~~~l~~~r~l~G~~~~~ 224 (565)
+.+..-+...+ |.+.-.+|.+...++-++=.|+..+...+=+..+-.+.. .+-.+-+++++.-.+.|+..|-
T Consensus 280 ~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 280 GDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred chhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch
Confidence 45666777777 899999997777776655433332222222222222221 2245677888999999999999
Q ss_pred hHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHH
Q psy17080 225 IVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY 266 (565)
Q Consensus 225 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~ 266 (565)
.....+.+..+-.+++++..+..+.......|...|..+++.
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 999999999999999999999888888888888888777654
No 292
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=87.47 E-value=6.9 Score=40.29 Aligned_cols=111 Identities=14% Similarity=0.086 Sum_probs=79.1
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhcccccccch--hhHHHHH--HHHHHHHHHHHh---------cchhHHHHHHHHHHhhh
Q psy17080 155 SLESLAEMVFLLGVAFGGFFSGLVSDKFGRK--KALMGSL--VFQLVLGVLVAI---------SPWFELYLVVRFFLGFF 221 (565)
Q Consensus 155 ~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr--~~l~~~~--~l~~~~~~~~~~---------~~~~~~l~~~r~l~G~~ 221 (565)
+..-+...+|.+|-.+|..+..+.. .-++| ++++.+. +++.-..++|.. -++-+..++..++.|+.
T Consensus 307 ~~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 307 FYPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHh
Confidence 4667778888899999888665431 12223 3333221 222222233332 24666778889999999
Q ss_pred hhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHH
Q psy17080 222 CVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY 266 (565)
Q Consensus 222 ~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~ 266 (565)
.|-....++.+..+..++++|..+..+...+..+|..+|..++..
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999888877654
No 293
>KOG2601|consensus
Probab=83.11 E-value=23 Score=35.07 Aligned_cols=47 Identities=13% Similarity=0.147 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 449 VGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
...+|.=..-....-...|..|.+.|+.+.|+.|.....-.++.-++
T Consensus 395 aaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~il 441 (503)
T KOG2601|consen 395 AARLGLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDIL 441 (503)
T ss_pred HHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhE
Confidence 33444444445566778999999999999999999888776665544
No 294
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=82.53 E-value=11 Score=35.33 Aligned_cols=103 Identities=25% Similarity=0.370 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHHhhhhhhhhccccc-ccchhhHH----HHHHHHHHHHHHHHh-cc----hhHHHHHHHHHHhhhhhhhH
Q psy17080 157 ESLAEMVFLLGVAFGGFFSGLVSDK-FGRKKALM----GSLVFQLVLGVLVAI-SP----WFELYLVVRFFLGFFCVSIV 226 (565)
Q Consensus 157 ~~l~~s~~~lg~~ig~~~~G~l~Dr-~Grr~~l~----~~~~l~~~~~~~~~~-~~----~~~~l~~~r~l~G~~~~~~~ 226 (565)
.....-++..|..+|.+..|++... +-||+.+. .++++..++.++..+ .. ++..+++.-|+.|++.=+..
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 4556777888888999999999875 56666444 234444444444212 21 35667788888888764444
Q ss_pred hhhhhhhccccccchhHHHHHHhhhhhHHHHHHH
Q psy17080 227 FSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAI 260 (565)
Q Consensus 227 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~ 260 (565)
++...+--|. +...+.+..-.++..|++|.++-
T Consensus 223 ~ViL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 223 GVILNLPHEY-KGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHHhcChhhh-cCCCcceehhHHHHHHHHHHHHH
Confidence 4443333333 33334445555666777777653
No 295
>KOG4332|consensus
Probab=81.51 E-value=12 Score=35.21 Aligned_cols=120 Identities=17% Similarity=0.093 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHH-hcccc-----cchh
Q psy17080 399 EFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPI-YTAEL-----FPTK 472 (565)
Q Consensus 399 ~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~-----~p~~ 472 (565)
.++...+.|-++||.|||+.-+...+...++|+.= ..+.....++.-.++|+..+..++..-+ ++.|. +|.+
T Consensus 85 smLFGtivgSLaDkqGRKracvtycitYiLsCiTK--hSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Feqq 162 (454)
T KOG4332|consen 85 SMLFGTIVGSLADKQGRKRACVTYCITYILSCITK--HSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQ 162 (454)
T ss_pred HHHHHHHHHHHHhhhccccceeeehHHHHHHHHhh--cCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHh
Confidence 34455667789999999987665555555555432 2344344455566677766666665443 33443 3443
Q ss_pred hhhhHHHHHH-----HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q psy17080 473 MRNLGVGASS-----VPAGVALILIPYLWHMQSINIHFPMGLLGVVGVLGGLS 520 (565)
Q Consensus 473 ~r~~~~g~~~-----~~~~lg~~i~p~i~~~~~~~~~~~~~~~~~~~~i~~~~ 520 (565)
.....++=.. ...-+.+..+.++...-..|+..||-..+.+..++..+
T Consensus 163 Wls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAv 215 (454)
T KOG4332|consen 163 WLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAV 215 (454)
T ss_pred hhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHH
Confidence 3332222221 11223333344443334457777887666655554433
No 296
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=70.73 E-value=1.4e+02 Score=31.06 Aligned_cols=97 Identities=9% Similarity=-0.063 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhh--c------CCc-------------h----------HHHHHHH
Q psy17080 399 EFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLG--F------APG-------------S----------FITISLA 447 (565)
Q Consensus 399 ~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~--~------~~~-------------~----------~~~~~~~ 447 (565)
.++..++-.++.+++.++++..+.........++.+. + .++ . |......
T Consensus 75 avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Y 154 (509)
T COG3202 75 AVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFY 154 (509)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHH
Confidence 4455666777888888888765554444433333331 1 011 0 3333333
Q ss_pred HHHHHHHHHHHH-HHHHhcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 448 MVGKFAISSSNV-IIPIYTAELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 448 ~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
...-.--....+ ..+..+.|+...++..+-.++.++.++++..++..+
T Consensus 155 i~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~ 203 (509)
T COG3202 155 IMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEV 203 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 333333333344 567899999999999999999999999998887766
No 297
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=70.62 E-value=20 Score=27.15 Aligned_cols=50 Identities=10% Similarity=-0.096 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCc
Q psy17080 389 YLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPG 439 (565)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~ 439 (565)
........++.++|.+...++.++.++++.+..+.+...+..+.+. +..+
T Consensus 30 g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma-~~~~ 79 (85)
T PF06779_consen 30 GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMA-LTHS 79 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-HHhc
Confidence 3445556677788888888888887778888888888888777776 4444
No 298
>KOG3574|consensus
Probab=66.98 E-value=97 Score=31.13 Aligned_cols=31 Identities=23% Similarity=0.255 Sum_probs=19.2
Q ss_pred HHHHHHHh-----hcCChHHHH-HHHHHHHHHHHHHh
Q psy17080 404 VISIFILL-----KMGRRRPLC-LTTLGAGLACLMTL 434 (565)
Q Consensus 404 ~~~~~l~d-----r~grr~~l~-~~~~~~~~~~~~~~ 434 (565)
++...++| |+|||+..+ -+..+.+..+.++.
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs 117 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLS 117 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHh
Confidence 45556677 999987644 34455555555555
No 299
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=66.19 E-value=2.2 Score=41.63 Aligned_cols=108 Identities=15% Similarity=0.162 Sum_probs=3.8
Q ss_pred HHHHHHHHHHhhhhhhhhccccc-ccchhhHHHHH--HHHHHHHHHH----------HhcchhHHHHHHHHHHhhhhhhh
Q psy17080 159 LAEMVFLLGVAFGGFFSGLVSDK-FGRKKALMGSL--VFQLVLGVLV----------AISPWFELYLVVRFFLGFFCVSI 225 (565)
Q Consensus 159 l~~s~~~lg~~ig~~~~G~l~Dr-~Grr~~l~~~~--~l~~~~~~~~----------~~~~~~~~l~~~r~l~G~~~~~~ 225 (565)
....+|.+|-.+|..+.++.-=+ -.+|++.+.+. +++.-..++| .+.+|-+.+++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 35667888888888877754211 13444443321 1222222222 12345567788899999999999
Q ss_pred HhhhhhhhccccccchhHHHHHHhhhhhHHHHHHHHHHHHH
Q psy17080 226 VFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYY 266 (565)
Q Consensus 226 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~ 266 (565)
....+.+..+..++++|..+..+...+..+|..+|..++..
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888888888877654
No 300
>KOG3810|consensus
Probab=62.12 E-value=24 Score=34.70 Aligned_cols=120 Identities=13% Similarity=0.067 Sum_probs=65.7
Q ss_pred HHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhhHHHHHHHHHHH
Q psy17080 408 FILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAELFPTKMRNLGVGASSVPAGV 487 (565)
Q Consensus 408 ~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~l 487 (565)
.+.|...-|++++.-.+.......++. +.++.+..-++-++.|.... .--.-++|+-+..+++.+.++.|.+....-.
T Consensus 64 lLTD~lrYKPvivlq~ls~v~~w~~lv-~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~ 141 (433)
T KOG3810|consen 64 LLTDYLRYKPVVVLQALSGVPVWIMLV-FGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLV 141 (433)
T ss_pred HHhhhhhcceeeeeeccchhHHHHHHH-hcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHH
Confidence 456777777766554443333333333 55555444333333333222 2344567888888999988888887665544
Q ss_pred HHHHH----HHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhcccCCC
Q psy17080 488 ALILI----PYLWHMQSINIHFPMGLLGVVGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 488 g~~i~----p~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~et~~ 529 (565)
|-..+ .++...+..++...-.+-.....++.++.+++|..++
T Consensus 142 g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~r 187 (433)
T KOG3810|consen 142 GKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKR 187 (433)
T ss_pred HhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCch
Confidence 44444 3333344444443333333444455566678887664
No 301
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=61.40 E-value=1.5e+02 Score=30.40 Aligned_cols=22 Identities=18% Similarity=0.255 Sum_probs=12.2
Q ss_pred HHHHHHhcccccchhhhhhHHH
Q psy17080 458 NVIIPIYTAELFPTKMRNLGVG 479 (565)
Q Consensus 458 ~~~~~~~~~e~~p~~~r~~~~g 479 (565)
......|+.-++....|+..++
T Consensus 363 i~Li~~Y~~~vl~~~k~~~~~~ 384 (430)
T PF06123_consen 363 IGLISLYLSSVLKSWKRGLIFA 384 (430)
T ss_pred HHHHHHHHHHHHhcchHHHHHH
Confidence 3444556666666666655544
No 302
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=59.42 E-value=1.4e+02 Score=27.06 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=15.8
Q ss_pred HHHHHHHHhhhhhhhhcc---cccccchhhHHHHHHH
Q psy17080 161 EMVFLLGVAFGGFFSGLV---SDKFGRKKALMGSLVF 194 (565)
Q Consensus 161 ~s~~~lg~~ig~~~~G~l---~Dr~Grr~~l~~~~~l 194 (565)
.....+++.+|..+.+.+ .++..+|+.....+++
T Consensus 52 ~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~ 88 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLL 88 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHH
Confidence 344445555556565555 2334444444444333
No 303
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=59.23 E-value=1.1e+02 Score=30.79 Aligned_cols=18 Identities=22% Similarity=0.427 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHhhcC
Q psy17080 397 IVEFPAIVISIFILLKMG 414 (565)
Q Consensus 397 ~~~~~~~~~~~~l~dr~g 414 (565)
+..+...++.|++..|.+
T Consensus 6 i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 444555556667666654
No 304
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=58.14 E-value=1.3e+02 Score=28.94 Aligned_cols=37 Identities=24% Similarity=0.401 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHhc-chhHHHHHHHHHHhhhhhhh
Q psy17080 189 MGSLVFQLVLGVLVAIS-PWFELYLVVRFFLGFFCVSI 225 (565)
Q Consensus 189 ~~~~~l~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~ 225 (565)
+.+++.+++++++..+. ++.+.+.+.-++.+++.++.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 44555555555555554 44555555566666665443
No 305
>PRK11715 inner membrane protein; Provisional
Probab=57.81 E-value=1.8e+02 Score=29.84 Aligned_cols=22 Identities=23% Similarity=0.347 Sum_probs=12.6
Q ss_pred HHHHHhcccccchhhhhhHHHH
Q psy17080 459 VIIPIYTAELFPTKMRNLGVGA 480 (565)
Q Consensus 459 ~~~~~~~~e~~p~~~r~~~~g~ 480 (565)
.....|+.-+.....|+..++.
T Consensus 370 ~li~~Y~~~vl~~~k~g~~~~~ 391 (436)
T PRK11715 370 LLIGFYLSAVLRSWKRGLLFAA 391 (436)
T ss_pred HHHHHHHHHHHhcchHHHHHHH
Confidence 4445566666666666665543
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.95 E-value=27 Score=27.45 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhhhhhhhhcccccc-cchhhHHHHH
Q psy17080 158 SLAEMVFLLGVAFGGFFSGLVSDKF-GRKKALMGSL 192 (565)
Q Consensus 158 ~l~~s~~~lg~~ig~~~~G~l~Dr~-Grr~~l~~~~ 192 (565)
+.-.+.-+++..+.....||+.||| |.++..++..
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 4445555666666666789999985 5666544433
No 307
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=52.03 E-value=3.3e+02 Score=30.13 Aligned_cols=52 Identities=17% Similarity=0.079 Sum_probs=34.5
Q ss_pred hhhccccc----ccchhhHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHhhhhhhh
Q psy17080 174 FSGLVSDK----FGRKKALMGSLVFQLVLGVLVAISP-WFELYLVVRFFLGFFCVSI 225 (565)
Q Consensus 174 ~~G~l~Dr----~Grr~~l~~~~~l~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~ 225 (565)
+.+-++|. -||.+-++++.+++.++++...+.. ..+.+...-++.+++.++.
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 34556664 4677778888888888888877654 4455556666666664443
No 308
>KOG1237|consensus
Probab=51.59 E-value=96 Score=33.25 Aligned_cols=125 Identities=13% Similarity=0.099 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHhh-cCChHHHHHHHHHHHHHHHHHhh------cCC-------c-----h------HHHHHHHHHHH
Q psy17080 397 IVEFPAIVISIFILLK-MGRRRPLCLTTLGAGLACLMTLG------FAP-------G-----S------FITISLAMVGK 451 (565)
Q Consensus 397 ~~~~~~~~~~~~l~dr-~grr~~l~~~~~~~~~~~~~~~~------~~~-------~-----~------~~~~~~~~~~~ 451 (565)
.......+++++++|- +||-+.+.++.++..++.+++.. +.+ . . ..+.....+..
T Consensus 84 G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia 163 (571)
T KOG1237|consen 84 GTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIA 163 (571)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHhe
Confidence 3445566788899996 58888877777766665443321 111 0 0 11222222333
Q ss_pred HHHHHHHHHHHHhcccccchhh----hh--hHHHHHHHHHHHHHHHHHHH-HHH-HHhhhhhHHHHHHHHHHHHHHHH
Q psy17080 452 FAISSSNVIIPIYTAELFPTKM----RN--LGVGASSVPAGVALILIPYL-WHM-QSINIHFPMGLLGVVGVLGGLSV 521 (565)
Q Consensus 452 ~~~~~~~~~~~~~~~e~~p~~~----r~--~~~g~~~~~~~lg~~i~p~i-~~~-~~~~~~~~~~~~~~~~~i~~~~~ 521 (565)
++.+..-+....+-+|-++... +. .-+.......++|..++-.+ ... +..+|...|.+..++.+++.+++
T Consensus 164 ~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 164 LGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred eccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 4555556677788888887322 22 33444455566676666555 333 45677777877777776665554
No 309
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=48.93 E-value=2.7e+02 Score=30.81 Aligned_cols=53 Identities=21% Similarity=0.116 Sum_probs=35.5
Q ss_pred hhhccccc----ccchhhHHHHHHHHHHHHHHHHhcch-hHHHHHHHHHHhhhhhhhH
Q psy17080 174 FSGLVSDK----FGRKKALMGSLVFQLVLGVLVAISPW-FELYLVVRFFLGFFCVSIV 226 (565)
Q Consensus 174 ~~G~l~Dr----~Grr~~l~~~~~l~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~ 226 (565)
+.+-++|. -||.+-++++.++++++++...+... .+.+...-++.+++.++..
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlg 99 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLG 99 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 34456664 36678888899999998888876644 4455556666666654443
No 310
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=47.11 E-value=3.1e+02 Score=27.48 Aligned_cols=40 Identities=13% Similarity=0.180 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhcccccchhh----hhhHHHHHHHHHHHHHHHHHHH
Q psy17080 453 AISSSNVIIPIYTAELFPTKM----RNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 453 ~~~~~~~~~~~~~~e~~p~~~----r~~~~g~~~~~~~lg~~i~p~i 495 (565)
..-...++.+....|.+=.+. -|-..|.. ...+.+.-|.+
T Consensus 247 ~~F~vl~ii~~i~~E~~L~~Yv~v~~G~~~G~l---ia~~~l~~p~~ 290 (374)
T PF01528_consen 247 NVFAVLSIIYLIVIEVVLARYVKVQFGPHLGTL---IACGILGLPAI 290 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchHHHH---HHHHHHHHHHH
Confidence 333445666666777654443 23333433 23444455655
No 311
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=44.11 E-value=63 Score=23.87 Aligned_cols=40 Identities=8% Similarity=0.159 Sum_probs=26.6
Q ss_pred HHhhhhhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Q psy17080 247 VMYLFPVPVGYIAISGIAYYSHNWRLLQWVITIPTIFFLT 286 (565)
Q Consensus 247 ~~~~~~~~lG~~~~~~l~~~~~~Wr~~~~~~~~~~~~~~~ 286 (565)
-+.+....++.+++-.+++...+.+..+++.++..++.++
T Consensus 11 ~l~~~il~~~~iisfi~Gy~~q~~~~~~~~~~~g~~~~~l 50 (76)
T PF06645_consen 11 KLMQYILIISAIISFIVGYITQSFSYTFYIYGAGVVLTLL 50 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455566677777777788877888887776655444433
No 312
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=43.07 E-value=3.8e+02 Score=27.31 Aligned_cols=30 Identities=10% Similarity=-0.077 Sum_probs=15.0
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 466 AELFPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 466 ~e~~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.+..+-+.---+..+-...+-+|.+..++.
T Consensus 301 ~~~~~iDD~~~~~~vHg~~Gi~G~i~~glf 330 (403)
T TIGR00836 301 KKKLKIDDPLDAFAVHGVGGIWGLIATGLF 330 (403)
T ss_pred HHHcCCCCCcccchhhhhhHHHHHHHHHHh
Confidence 333333333334555555556666666655
No 313
>PF08802 CytB6-F_Fe-S: Cytochrome B6-F complex Fe-S subunit ; InterPro: IPR014909 The cytochrome b6-f complex mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. The cytochrome b6-f complex has 4 large subunits, these are: cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are: PetG, PetL, PetM and PetN. The complex functions as a dimer. This protein corresponds to the alpha helical transmembrane domain of the cytochrome b6-f complex Rieske iron-sulphur subunit. ; GO: 0009496 plastoquinol-plastocyanin reductase activity, 0051537 2 iron, 2 sulfur cluster binding, 0055114 oxidation-reduction process, 0042651 thylakoid membrane; PDB: 1Q90_R 1VF5_D 2E75_D 2E74_D 2E76_D 2D2C_Q 2ZT9_D.
Probab=42.54 E-value=33 Score=21.53 Aligned_cols=36 Identities=11% Similarity=0.124 Sum_probs=23.9
Q ss_pred cCCCChHHHHHHHHHHhhhHHHHHHHHHhhhhccCC
Q psy17080 35 IGDFGKWQFQLTLFLSLLNIPCTWHIFALTFQGASQ 70 (565)
Q Consensus 35 ~g~~G~~Q~~~~~~~~~~~~~~~~~~~~~~f~~~~p 70 (565)
+.++||-|.+-+++......+.+...+-++-.+.+|
T Consensus 3 VPdm~RR~lmN~ll~Gava~~a~~~lyP~~~ffvPP 38 (39)
T PF08802_consen 3 VPDMSRRQLMNLLLGGAVAVPAGGMLYPYVKFFVPP 38 (39)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred CCChhHHHHHHHHHHhhHHHHHHHHhhhheeEecCC
Confidence 677899999999999888888776666555444433
No 314
>KOG2881|consensus
Probab=42.15 E-value=2.1e+02 Score=26.80 Aligned_cols=28 Identities=11% Similarity=0.046 Sum_probs=16.5
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHHHH
Q psy17080 402 AIVISIFILLKMGRRRPLCLTTLGAGLA 429 (565)
Q Consensus 402 ~~~~~~~l~dr~grr~~l~~~~~~~~~~ 429 (565)
+.+.+-+++.|+..|.+.+++.++..+.
T Consensus 256 AVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 256 AVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 3334445677888777666655544443
No 315
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=41.18 E-value=85 Score=26.80 Aligned_cols=34 Identities=6% Similarity=-0.153 Sum_probs=25.9
Q ss_pred HHHHHHhcccccchhhhhhHHHHHHHHHHHHHHH
Q psy17080 458 NVIIPIYTAELFPTKMRNLGVGASSVPAGVALIL 491 (565)
Q Consensus 458 ~~~~~~~~~e~~p~~~r~~~~g~~~~~~~lg~~i 491 (565)
..+.|-..+-...++.-|+..|+-.+-.+++-+.
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 4677777787888887899999988777766543
No 316
>COG3619 Predicted membrane protein [Function unknown]
Probab=40.26 E-value=3e+02 Score=25.36 Aligned_cols=65 Identities=22% Similarity=0.293 Sum_probs=31.8
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhcccccccc-hhh--HHHHHHHHHHHHHHHHhc----chhHHHHHHHHHHh
Q psy17080 155 SLESLAEMVFLLGVAFGGFFSGLVSDKFGR-KKA--LMGSLVFQLVLGVLVAIS----PWFELYLVVRFFLG 219 (565)
Q Consensus 155 ~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Gr-r~~--l~~~~~l~~~~~~~~~~~----~~~~~l~~~r~l~G 219 (565)
...........+..++|......+..|..| ..+ ...+.++.....+..++. ++....+..-+..|
T Consensus 55 ~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg 126 (226)
T COG3619 55 AALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMG 126 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 334555666667777776655555555554 222 222333333333344443 35544444445544
No 317
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=36.91 E-value=1.3e+02 Score=24.02 Aligned_cols=6 Identities=17% Similarity=0.445 Sum_probs=2.2
Q ss_pred cCChHH
Q psy17080 413 MGRRRP 418 (565)
Q Consensus 413 ~grr~~ 418 (565)
+.|-+.
T Consensus 8 iN~~R~ 13 (114)
T PF11023_consen 8 INKIRT 13 (114)
T ss_pred HHHHHH
Confidence 333333
No 318
>PRK02935 hypothetical protein; Provisional
Probab=36.23 E-value=1.4e+02 Score=23.38 Aligned_cols=13 Identities=23% Similarity=0.383 Sum_probs=5.3
Q ss_pred hhcCChHHHHHHH
Q psy17080 411 LKMGRRRPLCLTT 423 (565)
Q Consensus 411 dr~grr~~l~~~~ 423 (565)
.|+.|-+.....+
T Consensus 7 sKINkiRt~aL~l 19 (110)
T PRK02935 7 NKINKIRTFALSL 19 (110)
T ss_pred hHHHHHHHHHHHH
Confidence 3444444433333
No 319
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=34.39 E-value=3.5e+02 Score=27.79 Aligned_cols=49 Identities=4% Similarity=-0.029 Sum_probs=26.2
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhh
Q psy17080 241 WLTIMGVMYLFPVPVGYIAISGIAYYSHNWRLLQWVITIPTIFFLTLWW 289 (565)
Q Consensus 241 ~r~~~~~~~~~~~~lG~~~~~~l~~~~~~Wr~~~~~~~~~~~~~~~~~~ 289 (565)
|-+...+..-++.+.-.+++......+.+||....+.++++++..+++.
T Consensus 348 hi~F~~AYliAa~a~i~Li~~Y~~~vl~~~k~~~~~~~~L~~LY~~Ly~ 396 (430)
T PF06123_consen 348 HIGFNLAYLIAALACIGLISLYLSSVLKSWKRGLIFAGLLAALYGFLYV 396 (430)
T ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444444555556777776666666555555443
No 320
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=34.03 E-value=4.9e+02 Score=25.97 Aligned_cols=27 Identities=7% Similarity=0.058 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy17080 441 FITISLAMVGKFAISSSNVIIPIYTAE 467 (565)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~e 467 (565)
+...+...+.|...|.-.|..+.+...
T Consensus 106 ~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 106 LVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 555566666777777777777766655
No 321
>PRK10929 putative mechanosensitive channel protein; Provisional
Probab=32.87 E-value=8.8e+02 Score=28.55 Aligned_cols=21 Identities=19% Similarity=0.233 Sum_probs=12.0
Q ss_pred hhHHHHHHHHHHHHHhcchhH
Q psy17080 252 PVPVGYIAISGIAYYSHNWRL 272 (565)
Q Consensus 252 ~~~lG~~~~~~l~~~~~~Wr~ 272 (565)
..++..++...+||+...++.
T Consensus 679 ~~P~~l~~l~~~GY~yTa~~L 699 (1109)
T PRK10929 679 GAPLVAALASALGYLATAQAL 699 (1109)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345555556667776654443
No 322
>PRK11715 inner membrane protein; Provisional
Probab=32.69 E-value=3.8e+02 Score=27.57 Aligned_cols=51 Identities=4% Similarity=0.019 Sum_probs=28.9
Q ss_pred chhHHHHHHhhhhhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhh
Q psy17080 240 KWLTIMGVMYLFPVPVGYIAISGIAYYSHNWRLLQWVITIPTIFFLTLWWI 290 (565)
Q Consensus 240 ~~r~~~~~~~~~~~~lG~~~~~~l~~~~~~Wr~~~~~~~~~~~~~~~~~~~ 290 (565)
+|.+...++.-++.+.-.+++..+...+.+||....+.+.++.+..+++..
T Consensus 353 EHigF~~AYliAa~a~v~li~~Y~~~vl~~~k~g~~~~~~L~~LYg~Ly~l 403 (436)
T PRK11715 353 EHIGFTLAYLIAALACVLLIGFYLSAVLRSWKRGLLFAAALAALYGVLYGL 403 (436)
T ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 445555555544444444445555555667777777666666555555443
No 323
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=32.39 E-value=1.1e+02 Score=25.66 Aligned_cols=22 Identities=0% Similarity=-0.165 Sum_probs=16.6
Q ss_pred hccccccchhHHHHHHhhhhhH
Q psy17080 233 CMELVGGKWLTIMGVMYLFPVP 254 (565)
Q Consensus 233 i~e~~~~~~r~~~~~~~~~~~~ 254 (565)
+.|++|++.|..+.+.+.....
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~ 81 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSS 81 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHH
Confidence 5799999999988776664433
No 324
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=31.62 E-value=5.4e+02 Score=25.71 Aligned_cols=82 Identities=13% Similarity=0.123 Sum_probs=55.0
Q ss_pred chhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHH-----HHHHHh----cchhHHHHHHHHHHhhhhhh
Q psy17080 154 SSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVL-----GVLVAI----SPWFELYLVVRFFLGFFCVS 224 (565)
Q Consensus 154 ~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~-----~~~~~~----~~~~~~l~~~r~l~G~~~~~ 224 (565)
-.+.+++.+.|.....+|+...-++.|.--.-+.+..-+++..++ .+-..| .++-+.++++-++.|.-.|.
T Consensus 42 Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~ 121 (508)
T COG4262 42 ILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGA 121 (508)
T ss_pred eeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhc
Confidence 345688999999999999999988888643322222222222211 111123 24677888899999999999
Q ss_pred hHhhhhhhhcc
Q psy17080 225 IVFSGFVLCME 235 (565)
Q Consensus 225 ~~~~~~~~i~e 235 (565)
..|..+.++..
T Consensus 122 EiPL~mrml~~ 132 (508)
T COG4262 122 EIPLLMRMLQR 132 (508)
T ss_pred chHHHHHHHHH
Confidence 99999888765
No 325
>PF08997 UCR_6-4kD: Ubiquinol-cytochrome C reductase complex, 6.4kD protein; InterPro: IPR015089 The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4 kDa protein, which may be closely linked to the iron-sulphur protein in the complex and function as an iron-sulphur protein-binding factor []. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0009055 electron carrier activity; PDB: 1NTM_K 1SQV_K 1SQB_K 1NU1_K 1SQQ_K 1BE3_K 1BGY_W 2YBB_k 2FYU_K 1L0N_K ....
Probab=31.00 E-value=1.6e+02 Score=20.27 Aligned_cols=40 Identities=18% Similarity=0.410 Sum_probs=24.3
Q ss_pred hccccccchhHHHHHHhhhhhHHHHHHHHHHHHHhcchhHH
Q psy17080 233 CMELVGGKWLTIMGVMYLFPVPVGYIAISGIAYYSHNWRLL 273 (565)
Q Consensus 233 i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~~Wr~~ 273 (565)
+..+..+++...+-.+.......|...+-.+.++ .+||.+
T Consensus 2 ~~r~~G~k~~~lak~w~ps~~~~G~~~~l~lvy~-TDWklI 41 (56)
T PF08997_consen 2 LSRLIGPKYIELAKNWIPSAAAWGAAGGLALVYF-TDWKLI 41 (56)
T ss_dssp GGGG-SHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTHHH
T ss_pred chhhhcHHHHHHHHHhchhHHHHhhhhhhheeee-cchHhh
Confidence 3455667777777777766666666554444444 478864
No 326
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=29.38 E-value=6.3e+02 Score=25.77 Aligned_cols=27 Identities=7% Similarity=0.060 Sum_probs=13.9
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHH
Q psy17080 469 FPTKMRNLGVGASSVPAGVALILIPYL 495 (565)
Q Consensus 469 ~p~~~r~~~~g~~~~~~~lg~~i~p~i 495 (565)
.+-+.---+..+-...+-.|.+..++.
T Consensus 317 ~~iDD~~~~~~vHg~~Gi~G~i~~glf 343 (404)
T TIGR03644 317 LKIDDPVGAISVHGVAGIWGTLVVPIT 343 (404)
T ss_pred CCCCCCcCchHhhhHHHHHHHHHHHHh
Confidence 333333344555555556666666555
No 327
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=29.18 E-value=1.6e+02 Score=26.94 Aligned_cols=71 Identities=11% Similarity=0.037 Sum_probs=38.6
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHhhhc--ccchhHHHhcCCHHHHHHHHHHHHH
Q psy17080 246 GVMYLFPVPVGYIAISGIAYYSHNWRLLQWVITIPTIFFLTLWWIM--PESPRWLVSMGRNKEAMKILGDAAK 316 (565)
Q Consensus 246 ~~~~~~~~~lG~~~~~~l~~~~~~Wr~~~~~~~~~~~~~~~~~~~~--pesp~~l~~~~~~~~a~~~l~~~~~ 316 (565)
..++..+..++.++...+.+++.++.|.+++.+++..+++..+.|- -|.-.|-...|+.-.|..+++.+.+
T Consensus 27 l~~~ml~a~l~~~~v~v~ig~l~~~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~lr~ 99 (224)
T PF13829_consen 27 LPWLMLGAFLGPIAVFVLIGLLFGSWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLRR 99 (224)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhhcC
Confidence 3445555555555554444444455566777777654444443332 2333455556666666666766554
No 328
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=29.03 E-value=5.8e+02 Score=25.28 Aligned_cols=109 Identities=10% Similarity=0.132 Sum_probs=62.5
Q ss_pred hhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHH---HHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhh
Q psy17080 156 LESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQL---VLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVL 232 (565)
Q Consensus 156 ~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~---~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 232 (565)
..|....+..++..+. ++.+++..++|--+.+..+.++.. --.+....+.|......+-.+.|.-.|....-....
T Consensus 48 m~GI~~laP~la~~l~-~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPV 126 (354)
T PF04346_consen 48 MAGIMALAPVLAAFLS-PVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPV 126 (354)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhh
Confidence 4555555666655554 456789999999999988777642 234555677777766666666665544443333333
Q ss_pred hccccccchh-HHHHHHh--hhhhHHHHHHHHHHHH
Q psy17080 233 CMELVGGKWL-TIMGVMY--LFPVPVGYIAISGIAY 265 (565)
Q Consensus 233 i~e~~~~~~r-~~~~~~~--~~~~~lG~~~~~~l~~ 265 (565)
.-...+++.| -.+.++. -...++|.++++.+..
T Consensus 127 aLgii~k~D~~y~a~Gil~GiitIPiG~~vggl~~g 162 (354)
T PF04346_consen 127 ALGIIEKEDHKYLAKGILAGIITIPIGCFVGGLIAG 162 (354)
T ss_pred hhhhcChhhhHHHHHHHHHHHhhhCHHHHHHHHHHh
Confidence 3333444433 2333332 2344567666666554
No 329
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=28.61 E-value=1.2e+02 Score=26.99 Aligned_cols=24 Identities=25% Similarity=0.587 Sum_probs=20.3
Q ss_pred HHHHHHHHhhhhhhhhcccccccc
Q psy17080 161 EMVFLLGVAFGGFFSGLVSDKFGR 184 (565)
Q Consensus 161 ~s~~~lg~~ig~~~~G~l~Dr~Gr 184 (565)
+.-|.+++.+++.+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 345888999999999999999875
No 330
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=28.27 E-value=1.2e+02 Score=25.82 Aligned_cols=25 Identities=24% Similarity=0.598 Sum_probs=20.7
Q ss_pred HHHHHHHhhhhhhhhcccccccchh
Q psy17080 162 MVFLLGVAFGGFFSGLVSDKFGRKK 186 (565)
Q Consensus 162 s~~~lg~~ig~~~~G~l~Dr~Grr~ 186 (565)
.-|.+|+.+.+.+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 3478888899999999999988764
No 331
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=28.08 E-value=2.9e+02 Score=21.51 Aligned_cols=22 Identities=18% Similarity=0.193 Sum_probs=13.9
Q ss_pred HhhhhhHHHHHHHHHHHHHHHH
Q psy17080 500 SINIHFPMGLLGVVGVLGGLSV 521 (565)
Q Consensus 500 ~~~~~~~~~~~~~~~~i~~~~~ 521 (565)
...|--+|.+++++.+.+....
T Consensus 49 alQWIFAFvI~avlfv~sl~va 70 (97)
T PF08611_consen 49 ALQWIFAFVIAAVLFVLSLVVA 70 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567777777776665543
No 332
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=28.03 E-value=6e+02 Score=25.11 Aligned_cols=18 Identities=22% Similarity=0.338 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHhhcccC
Q psy17080 510 LGVVGVLGGLSVLLLPDT 527 (565)
Q Consensus 510 ~~~~~~i~~~~~~~l~et 527 (565)
.+.+.++.+++...+.++
T Consensus 291 ~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 291 LAFALIIIGFVVYNLAES 308 (334)
T ss_pred HHHHHHHHHhheEEccCC
Confidence 333333334443434333
No 333
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=28.00 E-value=1.2e+02 Score=25.39 Aligned_cols=20 Identities=10% Similarity=-0.114 Sum_probs=15.5
Q ss_pred hccccccchhHHHHHHhhhh
Q psy17080 233 CMELVGGKWLTIMGVMYLFP 252 (565)
Q Consensus 233 i~e~~~~~~r~~~~~~~~~~ 252 (565)
+.|++|+..|..+...+...
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t 77 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTT 77 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHH
Confidence 57999999998877665544
No 334
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=27.55 E-value=16 Score=34.04 Aligned_cols=17 Identities=24% Similarity=0.098 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcccCCC
Q psy17080 513 VGVLGGLSVLLLPDTTG 529 (565)
Q Consensus 513 ~~~i~~~~~~~l~et~~ 529 (565)
+.+++.++++++-+++.
T Consensus 174 ~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 174 LLFLAILIWLYVHDQRH 190 (381)
T ss_dssp -----------------
T ss_pred HHHHHHHHHHHhcCCCC
Confidence 34455566677766654
No 335
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=27.33 E-value=5.6e+02 Score=24.57 Aligned_cols=83 Identities=14% Similarity=0.108 Sum_probs=37.7
Q ss_pred hhhccccHHHHHHHHHHHHHHHHHHHhhhhhhhccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHH
Q psy17080 347 VMDLWRTPLIRLISFVQYIIWFSVYLVYYGLVLNLSNIGGDVYLNTIISGIVEFPAIVISIFILLKMGRRRPLCLTTLGA 426 (565)
Q Consensus 347 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~grr~~l~~~~~~~ 426 (565)
.+++.|+|+..............+...|..-..+-. ..+..+-..+.-+.+++-. .-++-+|+.|-..+.++....
T Consensus 62 ~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~--~leaSLGY~InPL~~VllG--~lflkErls~~Q~iAV~lA~~ 137 (293)
T COG2962 62 LKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGH--VLEASLGYFINPLVNVLLG--RLFLKERLSRLQWIAVGLAAA 137 (293)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCc--hhHHHhHHHHHHHHHHHHH--HHHHHhhccHHHHHHHHHHHH
Confidence 455677776555554444333333333322211111 1223333334333332211 124568888877666665555
Q ss_pred HHHHHHH
Q psy17080 427 GLACLMT 433 (565)
Q Consensus 427 ~~~~~~~ 433 (565)
++.....
T Consensus 138 GV~~~~~ 144 (293)
T COG2962 138 GVLIQTW 144 (293)
T ss_pred HHHHHHH
Confidence 5544433
No 336
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=27.07 E-value=3.2e+02 Score=22.28 Aligned_cols=48 Identities=13% Similarity=-0.079 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHhhhhhhhHhhhhhhhccccc
Q psy17080 191 SLVFQLVLGVLVAISPWFELYLVVRFFLGFFCVSIVFSGFVLCMELVG 238 (565)
Q Consensus 191 ~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~ 238 (565)
..++-.+++++.++......---.|.+.+.|.-+.+..-.++..|...
T Consensus 36 Tl~VNi~GsfllG~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~e~~~ 83 (119)
T PRK14230 36 NLFANWTGALLIGIFAETVNHPQWKLLLITGFLGSLTTLSGFSLETVT 83 (119)
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHhchHhhHHHHHHHHHH
Confidence 344455555555443211100012444455555556666666666654
No 337
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=27.03 E-value=2.8e+02 Score=22.08 Aligned_cols=24 Identities=17% Similarity=-0.184 Sum_probs=14.4
Q ss_pred HHHHhhhhhhhHhhhhhhhccccc
Q psy17080 215 RFFLGFFCVSIVFSGFVLCMELVG 238 (565)
Q Consensus 215 r~l~G~~~~~~~~~~~~~i~e~~~ 238 (565)
|.+.+.|.-+.+..-.++..|...
T Consensus 56 ~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 56 YAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHhhHccccccHHHHHHHHHH
Confidence 444455555566666677777664
No 338
>PRK10263 DNA translocase FtsK; Provisional
Probab=26.97 E-value=1.2e+03 Score=28.08 Aligned_cols=16 Identities=13% Similarity=0.341 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHhhcC
Q psy17080 399 EFPAIVISIFILLKMG 414 (565)
Q Consensus 399 ~~~~~~~~~~l~dr~g 414 (565)
+.+|..+...+..-+|
T Consensus 65 GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 65 GMPGAWLADTLFFIFG 80 (1355)
T ss_pred chHHHHHHHHHHHHHh
Confidence 3334444443333334
No 339
>PF07556 DUF1538: Protein of unknown function (DUF1538); InterPro: IPR011435 This family of protenis of unknown function contains several conserved glycines and phenylalanines.
Probab=26.93 E-value=2.3e+02 Score=25.78 Aligned_cols=87 Identities=22% Similarity=0.235 Sum_probs=49.4
Q ss_pred chhHHHHHHHHHHhhhhhhhHhhhhhhhccc--cccchhHHHHHHhhhhhHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Q psy17080 206 PWFELYLVVRFFLGFFCVSIVFSGFVLCMEL--VGGKWLTIMGVMYLFPVPVGYIAISGIAYYSHNWRLLQWVITIPTIF 283 (565)
Q Consensus 206 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~--~~~~~r~~~~~~~~~~~~lG~~~~~~l~~~~~~Wr~~~~~~~~~~~~ 283 (565)
.+.+.++..-++.|+......|...++..+. ..+.+-.+..-....+..+|..+.-.+...+.+|...+++...-.+.
T Consensus 60 ~~~~~l~~~gf~lGf~~t~AEPal~vL~~qve~vs~G~i~~~~l~~~vaiGVg~~i~lg~lRIi~g~~l~~~l~~~Y~l~ 139 (212)
T PF07556_consen 60 GSLWLLLLFGFVLGFLVTIAEPALRVLADQVEEVSGGSIPKSVLILAVAIGVGIFIALGMLRIIFGIPLWYFLIPGYILV 139 (212)
T ss_pred CCcEEeHHHHHHHHHHHHhhCcHHHHHHHHHHHhCcCCcchhHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 5677778888889998888888887775433 22322233333444555555555555555556777655544333332
Q ss_pred HHHHhhhccc
Q psy17080 284 FLTLWWIMPE 293 (565)
Q Consensus 284 ~~~~~~~~pe 293 (565)
+++.++.||
T Consensus 140 -~~l~~f~p~ 148 (212)
T PF07556_consen 140 -LILTFFSPE 148 (212)
T ss_pred -HHHHHhcCH
Confidence 233344443
No 340
>PRK11469 hypothetical protein; Provisional
Probab=26.79 E-value=4.6e+02 Score=23.37 Aligned_cols=47 Identities=11% Similarity=0.188 Sum_probs=24.3
Q ss_pred cHHHHHHHHHHHHHHHH----HHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Q psy17080 387 DVYLNTIISGIVEFPAI----VISIFILLKMGRRRPLCLTTLGAGLACLMT 433 (565)
Q Consensus 387 ~~~~~~~~~~~~~~~~~----~~~~~l~dr~grr~~l~~~~~~~~~~~~~~ 433 (565)
+........++..++.. .++.++.++++||.-+..+.++..++.-.+
T Consensus 132 ~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 132 NIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444433 344444556677766666666665555433
No 341
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=25.51 E-value=3.4e+02 Score=21.49 Aligned_cols=38 Identities=16% Similarity=0.209 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHH-HhhcCChHHHHHHHHHHHHHHH
Q psy17080 394 ISGIVEFPAIVISIFI-LLKMGRRRPLCLTTLGAGLACL 431 (565)
Q Consensus 394 ~~~~~~~~~~~~~~~l-~dr~grr~~l~~~~~~~~~~~~ 431 (565)
+.+..-+...+++..+ -+|+.+|+.........++..+
T Consensus 66 i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li 104 (113)
T PF13536_consen 66 IFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILI 104 (113)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 3333333344443333 3567777666555544444433
No 342
>PRK15086 ethanolamine utilization protein EutH; Provisional
Probab=25.19 E-value=6.9e+02 Score=24.88 Aligned_cols=106 Identities=9% Similarity=0.147 Sum_probs=58.0
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHH---HHHHHHHhcchhHHHHHHHHHHhhhhhhh----Hh
Q psy17080 155 SLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQL---VLGVLVAISPWFELYLVVRFFLGFFCVSI----VF 227 (565)
Q Consensus 155 ~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~---~~~~~~~~~~~~~~l~~~r~l~G~~~~~~----~~ 227 (565)
..+|....+..+...+.. +.+++.+..|--+.+..+.++.. --.+...++.|......+-.+.|.-.|.. .|
T Consensus 48 sm~GI~~laP~ls~~l~~-ii~Pi~~~lgaDpsmfa~siLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIP 126 (372)
T PRK15086 48 AMVGIMALAPVLAHVLGP-VIIPIYEALGADPSMFATTLLAVDMGGYQLAKELAGDPEAWLFSGLILGSMMGATIVFTIP 126 (372)
T ss_pred HHHHHHHHHHHHHHHHhh-hHHHHHHHhCCCHHHHHHHHHHhcCcCHHHHHHHhcChhhHHHHHHHHHHhccceEEeeHH
Confidence 345666666666655554 45788889999999888777642 22345556666666555555555444433 33
Q ss_pred hhhhhhccccccchhHHHHHHh--hhhhHHHHHHHHHHH
Q psy17080 228 SGFVLCMELVGGKWLTIMGVMY--LFPVPVGYIAISGIA 264 (565)
Q Consensus 228 ~~~~~i~e~~~~~~r~~~~~~~--~~~~~lG~~~~~~l~ 264 (565)
+....+-+ ++++-.+.++. -...++|.++++.+.
T Consensus 127 VaLgii~k---~D~~yla~Gil~GiitIPiG~~vggl~~ 162 (372)
T PRK15086 127 VALGIIEK---EDRKYLALGVLAGIITIPIGCLIGGLVA 162 (372)
T ss_pred hhHhhcch---hhHHHHHHHHHHHhHhhcHHHHHHHHHH
Confidence 33333322 22332333332 234456666666554
No 343
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.53 E-value=3.5e+02 Score=21.26 Aligned_cols=29 Identities=17% Similarity=0.217 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHhhcCChHHHHHHHHHHHH
Q psy17080 400 FPAIVISIFILLKMGRRRPLCLTTLGAGL 428 (565)
Q Consensus 400 ~~~~~~~~~l~dr~grr~~l~~~~~~~~~ 428 (565)
++|.+++-|+=.+++-.+.+.+.+++.++
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 44555555555567765544444444433
No 344
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=23.63 E-value=2.2e+02 Score=24.34 Aligned_cols=51 Identities=14% Similarity=0.009 Sum_probs=30.4
Q ss_pred chhHHHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHH
Q psy17080 206 PWFELYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIA 259 (565)
Q Consensus 206 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~ 259 (565)
+++..+++.-.+.|+|. ..+.|..++--.++++-|...|+-.+-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 44555555555555553 3344555666666777777777777666665543
No 345
>KOG3097|consensus
Probab=23.55 E-value=7.3e+02 Score=24.61 Aligned_cols=68 Identities=10% Similarity=0.099 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy17080 399 EFPAIVISIFILLKMGRRRPLCLTTLGAGLACLMTLGFAPGSFITISLAMVGKFAISSSNVIIPIYTAEL 468 (565)
Q Consensus 399 ~~~~~~~~~~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 468 (565)
.+..+++.+.+++++|-|+.+.++..........- +.+.....+....+.|++.+..+..--+|+++.
T Consensus 71 l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N--l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 71 LIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN--LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPM 138 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh--cchhHHhhccHHHhhccccccccccCcceecHH
Confidence 34455666689999999998877665544332221 122223334445556666666665555555554
No 346
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=22.83 E-value=9.2e+02 Score=25.87 Aligned_cols=9 Identities=33% Similarity=0.936 Sum_probs=4.1
Q ss_pred hHHHHHHHH
Q psy17080 505 FPMGLLGVV 513 (565)
Q Consensus 505 ~~~~~~~~~ 513 (565)
++|.+.+++
T Consensus 165 YpfGvig~i 173 (562)
T TIGR03802 165 YIFGTIGVI 173 (562)
T ss_pred hhhHHHHHH
Confidence 344444444
No 347
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=22.21 E-value=1.3e+02 Score=27.67 Aligned_cols=95 Identities=12% Similarity=0.076 Sum_probs=52.4
Q ss_pred ccceeeccccccCcchhhHHHHHHHHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHh
Q psy17080 140 GHTIISEWDLVCSNSSLESLAEMVFLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLG 219 (565)
Q Consensus 140 ~~~i~~~~~l~c~~~~~~~l~~s~~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G 219 (565)
..-|.+.|++ |++.-.| +.+.|..|..+|.++++.++- ++..+ +.-.-...-.-.|
T Consensus 127 laiI~ekYGl--dSpEgrG-Vl~~Yi~GTvfGtiffsllas-------------------~~a~~--~~fhP~ALAMasG 182 (241)
T PF11299_consen 127 LAIISEKYGL--DSPEGRG-VLGVYIIGTVFGTIFFSLLAS-------------------LLASL--GIFHPYALAMASG 182 (241)
T ss_pred eeeeehhcCC--CCccccc-eEEEeeehhhHHHHHHHHHHH-------------------HHHhc--cCCCHHHHHHHcC
Confidence 4556667777 2333333 455666666666666554331 11111 1111234445679
Q ss_pred hhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHHHH
Q psy17080 220 FFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGYIA 259 (565)
Q Consensus 220 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~ 259 (565)
+|.|....++..-+.+.+| +......++......+..+.
T Consensus 183 vGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~ 221 (241)
T PF11299_consen 183 VGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVT 221 (241)
T ss_pred CcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888886 44444545544444444333
No 348
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=21.78 E-value=5.7e+02 Score=22.66 Aligned_cols=26 Identities=0% Similarity=-0.354 Sum_probs=17.0
Q ss_pred hhhHhhhhhhhccccccchhHHHHHH
Q psy17080 223 VSIVFSGFVLCMELVGGKWLTIMGVM 248 (565)
Q Consensus 223 ~~~~~~~~~~i~e~~~~~~r~~~~~~ 248 (565)
+.-.....+.+.+..|+++|.++.-+
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~ 36 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFW 36 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHH
Confidence 34445566677777998888766433
No 349
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=21.73 E-value=5.5e+02 Score=24.63 Aligned_cols=31 Identities=26% Similarity=0.379 Sum_probs=21.7
Q ss_pred HHHHHHHHhhhhhhhHhhhhhhhccccccchh
Q psy17080 211 YLVVRFFLGFFCVSIVFSGFVLCMELVGGKWL 242 (565)
Q Consensus 211 l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r 242 (565)
.-..|.+.|+-. ..+..+++++.-.+|++++
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~ 52 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHD 52 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCC
Confidence 456788888774 4556678888888885543
No 350
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=21.47 E-value=2.1e+02 Score=23.23 Aligned_cols=16 Identities=13% Similarity=0.324 Sum_probs=10.1
Q ss_pred HHHHHHhhhcccchhH
Q psy17080 282 IFFLTLWWIMPESPRW 297 (565)
Q Consensus 282 ~~~~~~~~~~pesp~~ 297 (565)
++.+++++++|+.|..
T Consensus 54 ~~Yi~l~~~lp~~P~~ 69 (118)
T PRK10697 54 VAYIILSFALDPMPDN 69 (118)
T ss_pred HHHHHHHHhccCCccc
Confidence 3345567778877753
No 351
>PRK00720 tatA twin arginine translocase protein A; Provisional
Probab=21.04 E-value=1e+02 Score=22.89 Aligned_cols=18 Identities=33% Similarity=0.844 Sum_probs=13.2
Q ss_pred cCCCChHHHHHHHHHHhh
Q psy17080 35 IGDFGKWQFQLTLFLSLL 52 (565)
Q Consensus 35 ~g~~G~~Q~~~~~~~~~~ 52 (565)
+|++|.+|+++++++.+.
T Consensus 1 Mgg~g~~ellIIlvIvll 18 (78)
T PRK00720 1 MGSFSIWHWLIVLAVVLL 18 (78)
T ss_pred CCCCcHHHHHHHHHHHHH
Confidence 467899998887665544
No 352
>COG4769 Predicted membrane protein [Function unknown]
Probab=20.95 E-value=1.1e+02 Score=26.39 Aligned_cols=53 Identities=15% Similarity=0.084 Sum_probs=35.9
Q ss_pred HHHHHhhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHhhhh
Q psy17080 164 FLLGVAFGGFFSGLVSDKFGRKKALMGSLVFQLVLGVLVAISPWFELYLVVRFFLGFFC 222 (565)
Q Consensus 164 ~~lg~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 222 (565)
+.....+.+...-++..++|.|.+-+++.- ..-+|.+|..++.+.+++.|-..
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~~~ 134 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFTTS 134 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhcch
Confidence 334444555566677888998886444432 23467799999999999987653
No 353
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=20.70 E-value=3.8e+02 Score=28.17 Aligned_cols=48 Identities=6% Similarity=0.030 Sum_probs=38.2
Q ss_pred HHHHHHHHHhhhhhhhHhhhhhhhccccccchhHHHHHHhhhhhHHHH
Q psy17080 210 LYLVVRFFLGFFCVSIVFSGFVLCMELVGGKWLTIMGVMYLFPVPVGY 257 (565)
Q Consensus 210 ~l~~~r~l~G~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~ 257 (565)
.+++.-.+.-+..-..+++..++=+.+.+|.--|..+.+.+...++|.
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGG 454 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGG 454 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCC
Confidence 344455677777777888888888999999999999999988888774
Done!