BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17083
(60 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18168|SERR_DROME Protein serrate OS=Drosophila melanogaster GN=Ser PE=1 SV=3
Length = 1404
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 40/45 (88%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+CRPGWRG C++C YPGCKHG CNGS+W+C+CDTNWGGILCDQ
Sbjct: 302 ECRPGWRGPLCNECMVYPGCKHGSCNGSAWKCVCDTNWGGILCDQ 346
>sp|Q90Y57|JAG1A_DANRE Protein jagged-1a OS=Danio rerio GN=jag1a PE=2 SV=1
Length = 1242
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 9 IRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+ + +C GW+GE+CDQC P+PGC HG C WQC+CDTNWGG LCD+
Sbjct: 248 VPGNCRCLYGWQGEYCDQCIPHPGCVHGTCI-EPWQCLCDTNWGGQLCDK 296
>sp|Q9Y219|JAG2_HUMAN Protein jagged-2 OS=Homo sapiens GN=JAG2 PE=1 SV=3
Length = 1238
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 6 GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
G + +C GW+G FCD+C PYPGC HG C WQC C+TNWGG+LCD+
Sbjct: 255 GCTVPGECRCSYGWQGRFCDECVPYPGCVHGSCV-EPWQCNCETNWGGLLCDK 306
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 15 CRPGWRGEFC-----DQCKPYPGCKHGYC--NGSSWQCICDTNWGGILC 56
C PGW+G C C P P G C +G+S+ CIC W G C
Sbjct: 738 CPPGWKGSTCAVAKNSSCLPNPCVNGGTCVGSGASFSCICRDGWEGRTC 786
>sp|P78504|JAG1_HUMAN Protein jagged-1 OS=Homo sapiens GN=JAG1 PE=1 SV=3
Length = 1218
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+C+ GW+G +CD+C P+PGC HG CN WQC+C+TNWGG LCD+
Sbjct: 252 RCQYGWQGLYCDKCIPHPGCVHGICN-EPWQCLCETNWGGQLCDK 295
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Query: 15 CRPGWRGEFCD-----QCKPYPGCKHGYC--NGSSWQCICDTNWGGILCDQ 58
C GW G C+ C P P G C NG S+ C+C W G +C Q
Sbjct: 731 CPGGWEGTTCNIARNSSCLPNPCHNGGTCVVNGESFTCVCKEGWEGPICAQ 781
>sp|Q9QXX0|JAG1_MOUSE Protein jagged-1 OS=Mus musculus GN=Jag1 PE=1 SV=1
Length = 1218
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+C+ GW+G +CD+C P+PGC HG CN WQC+C+TNWGG LCD+
Sbjct: 252 RCQYGWQGLYCDKCIPHPGCVHGTCN-EPWQCLCETNWGGQLCDK 295
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Query: 15 CRPGWRGEFCD-----QCKPYPGCKHGYC--NGSSWQCICDTNWGGILCDQ 58
C GW G C+ C P P G C NG S+ C+C W G +C Q
Sbjct: 731 CPGGWEGTTCNIARNSSCLPNPCHNGGTCVVNGDSFTCVCKEGWEGPICTQ 781
>sp|Q9QYE5|JAG2_MOUSE Protein jagged-2 OS=Mus musculus GN=Jag2 PE=2 SV=2
Length = 1247
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 6 GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
G + +C GW+G+FCD+C PYPGC HG C W C C+TNWGG+LCD+
Sbjct: 255 GCTVPGECRCSYGWQGKFCDECVPYPGCVHGSCV-EPWHCDCETNWGGLLCDK 306
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Query: 15 CRPGWRGEFC-----DQCKPYPGCKHGYCNGS--SWQCICDTNWGGILC 56
C PGW+G C C P P G C GS S+ CIC W G C
Sbjct: 738 CPPGWKGSTCTIAKNSSCVPNPCVNGGTCVGSGDSFSCICRDGWEGRTC 786
>sp|P97607|JAG2_RAT Protein jagged-2 (Fragment) OS=Rattus norvegicus GN=Jag2 PE=2 SV=1
Length = 1202
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 6 GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
G + +C GW+G+FCD+C PYPGC HG C W C C+TNWGG+LCD+
Sbjct: 209 GCTVPGECRCSYGWQGKFCDECVPYPGCVHGSCV-EPWHCDCETNWGGLLCDK 260
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Query: 15 CRPGWRGEFC-----DQCKPYPGCKHGYCNGS--SWQCICDTNWGGILC 56
C PGW+G C C P P G C GS S+ CIC W G C
Sbjct: 693 CPPGWKGSTCTIAKNSSCVPNPCVNGGTCVGSGDSFSCICRDGWEGRTC 741
>sp|Q63722|JAG1_RAT Protein jagged-1 OS=Rattus norvegicus GN=Jag1 PE=1 SV=2
Length = 1219
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+C+ GW+G +CD+C P+PGC HG CN WQC+C+TNWGG LCD+
Sbjct: 252 RCQYGWQGLYCDKCIPHPGCVHGTCN-EPWQCLCETNWGGQLCDK 295
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Query: 15 CRPGWRGEFCD-----QCKPYPGCKHGYC--NGSSWQCICDTNWGGILCDQ 58
C GW G C+ C P P G C NG S+ C+C W G +C Q
Sbjct: 731 CPGGWEGTTCNIARNSSCLPNPCHNGGTCVVNGDSFTCVCKEGWEGPICTQ 781
>sp|Q9NR61|DLL4_HUMAN Delta-like protein 4 OS=Homo sapiens GN=DLL4 PE=1 SV=1
Length = 685
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 11 ASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
A CRPGW+G C++C P+ GC+HG C+ + WQC CD WGG+ CDQ
Sbjct: 237 AECLCRPGWQGRLCNECIPHNGCRHGTCS-TPWQCTCDEGWGGLFCDQ 283
>sp|Q90Y54|JAG1B_DANRE Protein jagged-1b OS=Danio rerio GN=jag1b PE=2 SV=1
Length = 1213
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+C GW+G +CD+C P+PGC HG C WQC+CDTNWGG LCD+
Sbjct: 249 KCLYGWQGPYCDKCIPHPGCVHGTC-VEPWQCLCDTNWGGQLCDK 292
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Query: 14 QCRPGWRGEFCD-----QCKPYPGCKHGYC--NGSSWQCICDTNWGGILCDQ 58
+C PGW G C+ C P P G C NG S+ C+C W G C +
Sbjct: 727 RCSPGWEGATCNIAKNSSCLPNPCENGGTCVVNGDSFNCVCKEGWEGSTCTE 778
>sp|Q9JI71|DLL4_MOUSE Delta-like protein 4 OS=Mus musculus GN=Dll4 PE=2 SV=2
Length = 686
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 15 CRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
CRPGW+G C++C P+ GC+HG C+ WQC CD WGG+ CDQ
Sbjct: 242 CRPGWQGRLCNECIPHNGCRHGTCS-IPWQCACDEGWGGLFCDQ 284
>sp|P97677|DLL1_RAT Delta-like protein 1 OS=Rattus norvegicus GN=Dll1 PE=2 SV=1
Length = 714
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+CR GW+G +CD+C YPGC HG C WQC C WGG+ C+Q
Sbjct: 243 KCRVGWQGRYCDECIRYPGCLHGTCQ-QPWQCNCQEGWGGLFCNQ 286
>sp|Q61483|DLL1_MOUSE Delta-like protein 1 OS=Mus musculus GN=Dll1 PE=1 SV=2
Length = 722
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+CR GW+G +CD+C YPGC HG C WQC C WGG+ C+Q
Sbjct: 243 KCRVGWQGRYCDECIRYPGCLHGTCQ-QPWQCNCQEGWGGLFCNQ 286
>sp|O00548|DLL1_HUMAN Delta-like protein 1 OS=Homo sapiens GN=DLL1 PE=2 SV=2
Length = 723
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+CR GW+G +CD+C YPGC HG C WQC C WGG+ C+Q
Sbjct: 244 KCRVGWQGRYCDECIRYPGCLHGTCQ-QPWQCNCQEGWGGLFCNQ 287
>sp|P80370|DLK1_HUMAN Protein delta homolog 1 OS=Homo sapiens GN=DLK1 PE=1 SV=3
Length = 383
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+C+PGW+G CDQC PGC HG C G QCIC W G LCD+
Sbjct: 44 RCQPGWQGPLCDQCVTSPGCLHGLC-GEPGQCICTDGWDGELCDR 87
>sp|Q6DI48|DLLA_DANRE Delta-like protein A OS=Danio rerio GN=dla PE=1 SV=1
Length = 772
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+CR G++G +CD+C YPGC HG C WQC C WGG+ C+Q
Sbjct: 246 KCRVGFKGRYCDECIRYPGCLHGTCQ-QPWQCNCQEGWGGLFCNQ 289
>sp|O57409|DLLB_DANRE Delta-like protein B OS=Danio rerio GN=dlb PE=1 SV=1
Length = 615
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+CR GW+G C +C YPGC HG C+ WQC+C WGG+ C+Q
Sbjct: 226 KCRLGWQGPSCSECVHYPGCLHGTCS-QPWQCVCKEGWGGLFCNQ 269
>sp|Q9IAT6|DLLC_DANRE Delta-like protein C OS=Danio rerio GN=dlc PE=2 SV=1
Length = 664
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+CR GW G CD+C +PGC HG CN +QC C WGG+ C++
Sbjct: 221 KCRIGWEGPLCDECTRHPGCLHGTCN-QPFQCTCKEGWGGLFCNE 264
>sp|A4FV93|DLK2_BOVIN Protein delta homolog 2 OS=Bos taurus GN=DLK2 PE=2 SV=1
Length = 383
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 SVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
S +C PGW G C++C PGC+HG C+ WQCIC T W G CD+
Sbjct: 45 SCRCDPGWEGLHCERCVRMPGCQHGTCH-QPWQCICHTGWAGKFCDK 90
>sp|Q8UWJ4|DLLD_DANRE Delta-like protein D OS=Danio rerio GN=dld PE=1 SV=2
Length = 717
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+CR G+ G++CD C YPGC HG C WQC C WGG+ C+Q
Sbjct: 242 KCRVGFSGKYCDDCIRYPGCLHGTCQ-QPWQCNCQEGWGGLFCNQ 285
>sp|D3ZUK3|DLK2_RAT Protein delta homolog 2 OS=Rattus norvegicus GN=Dlk2 PE=2 SV=1
Length = 382
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 SVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
S +C PGW G C++C PGC+HG C+ WQCIC + W G CD+
Sbjct: 45 SCRCDPGWEGLHCERCVRMPGCQHGTCH-QPWQCICHSGWAGKFCDK 90
>sp|Q8K1E3|DLK2_MOUSE Protein delta homolog 2 OS=Mus musculus GN=Dlk2 PE=2 SV=3
Length = 382
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 SVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
S +C PGW G C++C PGC+HG C+ WQCIC + W G CD+
Sbjct: 45 SCRCDPGWEGLHCERCVRMPGCQHGTCH-QPWQCICHSGWAGKFCDK 90
>sp|B2LW77|DLK2_PIG Protein delta homolog 2 OS=Sus scrofa GN=DLK2 PE=2 SV=2
Length = 383
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 SVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
S +C PGW G C++C PGC+HG C+ WQCIC + W G CD+
Sbjct: 45 SCRCDPGWEGLHCERCVRMPGCQHGTCH-QPWQCICHSGWAGKFCDK 90
>sp|Q6UY11|DLK2_HUMAN Protein delta homolog 2 OS=Homo sapiens GN=DLK2 PE=2 SV=1
Length = 383
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 SVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
S +C PGW G C++C PGC+HG C+ WQCIC + W G CD+
Sbjct: 45 SCRCDPGWEGLHCERCVRMPGCQHGTCH-QPWQCICHSGWAGKFCDK 90
>sp|P10041|DL_DROME Neurogenic locus protein delta OS=Drosophila melanogaster GN=Dl
PE=1 SV=2
Length = 833
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 15 CRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
C+ GW+G C++C P C HG CN W CIC+ WGG+ C+Q
Sbjct: 248 CQLGWKGALCNECVLEPNCIHGTCN-KPWTCICNEGWGGLYCNQ 290
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 12 SVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
+ C GW+G++C K GC+HG+C+ + QC+C W G LC++
Sbjct: 214 EIICLTGWQGDYCHIPKCAKGCEHGHCDKPN-QCVCQLGWKGALCNE 259
>sp|Q09163|DLK1_MOUSE Protein delta homolog 1 OS=Mus musculus GN=Dlk1 PE=1 SV=1
Length = 385
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCD 57
+C GW G CD+C PGC +G C WQCIC W G C+
Sbjct: 44 RCHVGWEGPLCDKCVTAPGCVNGVCK-EPWQCICKDGWDGKFCE 86
>sp|Q9WVB4|SLIT3_MOUSE Slit homolog 3 protein OS=Mus musculus GN=Slit3 PE=2 SV=2
Length = 1523
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 14 QCRPGWRGEFCDQCKPYP----GCKHGYC--NGSSWQCICDTNWGGILCDQ 58
+C PGW G CDQ P C+HG C G S+ C C +GG LCDQ
Sbjct: 1354 ECHPGWTGPLCDQEARDPCLGHSCRHGTCMATGDSYVCKCAEGYGGALCDQ 1404
>sp|O75094|SLIT3_HUMAN Slit homolog 3 protein OS=Homo sapiens GN=SLIT3 PE=2 SV=3
Length = 1523
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 14 QCRPGWRGEFCDQCKPYP----GCKHGYC--NGSSWQCICDTNWGGILCD 57
+CRPGW G CDQ P C HG C G+S+ C C +GG LCD
Sbjct: 1354 ECRPGWTGPLCDQEARDPCLGHRCHHGKCVATGTSYMCKCAEGYGGDLCD 1403
>sp|O88280|SLIT3_RAT Slit homolog 3 protein OS=Rattus norvegicus GN=Slit3 PE=2 SV=1
Length = 1523
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 14 QCRPGWRGEFCDQCKPYP----GCKHGYC--NGSSWQCICDTNWGGILCDQ 58
+C PGW G CDQ P C HG C G+S+ C C + G LCDQ
Sbjct: 1354 ECHPGWTGPLCDQEAQDPCLGHSCSHGTCVATGNSYVCKCAEGYEGPLCDQ 1404
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 12 SVQCRPGWRGEFC----DQCKPYPGCKHGYCN--GSSWQCICDTNWGGILCDQ 58
S QC G+ GE C D C P P C GS +QC+C N G C++
Sbjct: 3998 SCQCTSGFSGEQCSRRQDPCLPNPCHSQVQCRRLGSDFQCMCPANRDGKHCEK 4050
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 15 CRPGWRGEFC----DQCKPYPGCKHGYCNG--SSWQCICDTNWGGILCDQ 58
CRPG+RG C D C+P P G C ++C C G C++
Sbjct: 4080 CRPGFRGNQCESVSDSCRPNPCLHGGLCVSLKPGYKCNCTPGRYGRHCER 4129
>sp|Q80Z71|TENN_MOUSE Tenascin-N OS=Mus musculus GN=Tnn PE=1 SV=2
Length = 1560
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 12 SVQCRPGWRGEFCDQCKPYPGCKHGYCNGS----SWQCICDTNWGGILC 56
S C GW G CDQ P C G CNG QC+CD + G+ C
Sbjct: 154 SCHCDQGWEGADCDQ----PTCP-GACNGHGRCVDGQCVCDAPYVGVDC 197
>sp|Q96QV1|HHIP_HUMAN Hedgehog-interacting protein OS=Homo sapiens GN=HHIP PE=1 SV=3
Length = 700
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 15 CRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
C PGW G+FC K P C+HG +C+C + G C+Q
Sbjct: 625 CSPGWEGDFCRTAKCEPACRHGGVCVRPNKCLCKKGYLGPQCEQ 668
>sp|O94813|SLIT2_HUMAN Slit homolog 2 protein OS=Homo sapiens GN=SLIT2 PE=1 SV=1
Length = 1529
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 14 QCRPGWRGEFCDQCKPYP----GCKHGYC---NGSSWQCICDTNWGGILCDQ 58
+C+ GW G CDQ P C HG C N S+ C C GG+LCD+
Sbjct: 1357 ECQEGWMGPLCDQRTNDPCLGNKCVHGTCLPINAFSYSCKCLEGHGGVLCDE 1408
>sp|Q9R1B9|SLIT2_MOUSE Slit homolog 2 protein OS=Mus musculus GN=Slit2 PE=2 SV=2
Length = 1521
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 14 QCRPGWRGEFCDQCKPYP----GCKHGYC---NGSSWQCICDTNWGGILCDQ 58
+C GW G CDQ P C HG C N S+ C C GG+LCD+
Sbjct: 1349 ECEEGWMGPLCDQRTNDPCLGNKCVHGTCLPINAFSYSCKCLEGHGGVLCDE 1400
>sp|Q7TN16|HHIP_MOUSE Hedgehog-interacting protein OS=Mus musculus GN=Hhip PE=1 SV=2
Length = 700
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 15 CRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
C PGW G+FC K P C+HG +C+C + G C+Q
Sbjct: 625 CSPGWEGDFCRIAKCEPACRHGGVCVRPNKCLCKKGYLGPQCEQ 668
>sp|Q54JE1|SIBB_DICDI Integrin beta-like protein B OS=Dictyostelium discoideum GN=sibB
PE=1 SV=1
Length = 1941
Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNG---SSWQCICDTNWGGILC 56
+C+ G+ G D+C P CK+G NG +C+C+ W G C
Sbjct: 414 ECKDGFYG---DKCTVLPPCKNGVPNGGVNGDGKCLCNNGWTGSDC 456
>sp|G5EGQ6|TEN1_CAEEL Teneurin-1 OS=Caenorhabditis elegans GN=ten-1 PE=1 SV=1
Length = 2684
Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 11 ASVQCRPGWRGEFCDQCKPYPGCK-HGYCNGSSWQCICDTNWGGILC 56
S QC GWRG C K GC+ G C S C C + W G C
Sbjct: 670 GSCQCWKGWRGSNCTDKKCAIGCEDRGKC-ASDGSCKCSSGWNGENC 715
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 14 QCRPGWRGEFCD-QCKPYPGC-KHGYC-NGSSWQCICDTNWGGILC 56
+C PGW GE C+ + P+ C G C NG+ C C W G C
Sbjct: 523 RCNPGWTGEACELRACPHASCHDRGVCVNGT---CYCMDGWRGNDC 565
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 3 NRLGRNIRASVQCRPGWRGEFCDQCK-PYPGCKHGYCNGSSWQCICDTNWGGILCDQGH 60
N+ G + C PG+ G CD+ P +G +G C+C + + G C+ H
Sbjct: 446 NQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSGGI--CVCKSGFKGKECEMRH 502
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 12 SVQCRPGWRGEFCD----QCKPYPGCKHG-YCNG--SSWQCICDTNWGGILCD 57
S C G+ G C+ +C P P CKHG C + C+C T + G +C+
Sbjct: 3887 SCSCPEGFTGRACERDINECLPSP-CKHGAVCQNFPGGFNCVCKTGYTGKMCE 3938
>sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN=Lama5 PE=1 SV=4
Length = 3718
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 18/68 (26%)
Query: 4 RLGRNIRASVQCRPGWRGEFCDQCKP-------------YPGCKHGYCNGSSWQCICDTN 50
RLGR + C+P +RG C+ C P PG + C+ S QC+C T
Sbjct: 517 RLGRCV-----CKPNFRGAHCELCAPGFHGPSCHPCQCSSPGVANSLCDPESGQCMCRTG 571
Query: 51 WGGILCDQ 58
+ G CD
Sbjct: 572 FEGDRCDH 579
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 14/58 (24%)
Query: 14 QCRPGWRGEFCDQCKP----YPGC----------KHGYCNGSSWQCICDTNWGGILCD 57
CRPG+ G C +C P +P C H C+ ++ QC C G+ CD
Sbjct: 657 HCRPGYTGATCQECSPGFYGFPSCIPCHCSADGSLHTTCDPTTGQCRCRPRVTGLHCD 714
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 14/59 (23%)
Query: 14 QCRPGWRGEFCDQCKP----YPGCK----------HGYCNGSSWQCICDTNWGGILCDQ 58
+CRP G CD C P YP C+ C+ + QC C N G CDQ
Sbjct: 1556 RCRPNVAGRRCDTCAPGFYGYPSCRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCDQ 1614
>sp|P14585|LIN12_CAEEL Protein lin-12 OS=Caenorhabditis elegans GN=lin-12 PE=1 SV=1
Length = 1429
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 14 QCRPGWRGEFC------DQCKPYPGCKHGYCNGSS--WQCICDTNWGGILCDQG 59
QC PG+ G C D C P C HG C S +QCICD + G C +G
Sbjct: 235 QCPPGYHGSTCELLEKEDSCASNP-CSHGVCISFSGGFQCICDDGYSGSYCQEG 287
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 15 CRPGWRGEFCDQ--CKPYPG-CKHGYCNGS-----SWQCICDTNWGGILCDQ 58
C P G +C++ C P C HG C S +++C C+ + GILC+Q
Sbjct: 313 CPPERTGPYCEKMDCSAIPDICNHGTCIDSPLSEKAFECQCEPGYEGILCEQ 364
>sp|Q8JZM4|DNER_MOUSE Delta and Notch-like epidermal growth factor-related receptor
OS=Mus musculus GN=Dner PE=1 SV=1
Length = 737
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 9 IRASVQCRPGWRGEFCDQCKPY---PGCKHGYCN--GSSWQCICDTNWGGILCDQGH 60
+ + C PG+ G C Q + C HG C G+S++C+CD + G+ C++ +
Sbjct: 450 VHFTCSCSPGFTGPTCAQLVDFCALSPCAHGMCRSVGTSYKCLCDPGYHGLYCEEEY 506
>sp|Q8NFT8|DNER_HUMAN Delta and Notch-like epidermal growth factor-related receptor
OS=Homo sapiens GN=DNER PE=1 SV=1
Length = 737
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 9 IRASVQCRPGWRGEFCDQ----CKPYPGCKHGYCN--GSSWQCICDTNWGGILCDQGH 60
+ + C PG+ G C Q C P C HG C G+S++C+CD + G+ C++ +
Sbjct: 450 VHFTCNCSPGFTGPTCAQLIDFCALSP-CAHGTCRSVGTSYKCLCDPGYHGLYCEEEY 506
>sp|Q00546|TENR_CHICK Tenascin-R OS=Gallus gallus GN=TNR PE=1 SV=1
Length = 1353
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 15 CRPGWRGEFCDQCKPYPGCK-HGYCNGSSWQCICDTNWGGILCDQ 58
C GW G C + + GC G C QC+CD ++GG C Q
Sbjct: 189 CSEGWAGSNCSEPRCPRGCSSRGVC--LEGQCVCDNDYGGEDCSQ 231
>sp|O61307|TENM_DROME Teneurin-m OS=Drosophila melanogaster GN=Ten-m PE=1 SV=2
Length = 2731
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 14 QCRPGWRGEFCDQCK-PYPGCK-HGYCNGSSWQCICDTNWGGILC 56
QC G++G+FC++ P+P C HG+C + CIC W G C
Sbjct: 595 QCMRGYKGKFCEEVDCPHPNCSGHGFC--ADGTCICKKGWKGPDC 637
>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis elegans GN=lam-2 PE=1
SV=3
Length = 1633
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 16/61 (26%)
Query: 14 QCRPGWRGEFCDQCK----------------PYPGCKHGYCNGSSWQCICDTNWGGILCD 57
QC+PG G+ CD+C Y G ++ C+ +S QC+C N G CD
Sbjct: 966 QCKPGVTGQRCDRCADYHFGFSANGCQPCDCEYIGSENQQCDVNSGQCLCKENVEGRRCD 1025
Query: 58 Q 58
Q
Sbjct: 1026 Q 1026
>sp|O75093|SLIT1_HUMAN Slit homolog 1 protein OS=Homo sapiens GN=SLIT1 PE=2 SV=4
Length = 1534
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 9 IRASVQCRPGWRGEFCDQC----KPYPG--CKHGYCNGSSWQ---CICDTNWGGILCDQ 58
+ S QC+ G+ G C+Q +P G C HG+C S + C+CD + G LC+Q
Sbjct: 1397 LSYSCQCQDGYSGALCNQAGALAEPCRGLQCLHGHCQASGTKGAHCVCDPGFSGELCEQ 1455
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 14 QCRPGWRGEFCDQCKPYP----GCKHGYC---NGSSWQCICDTNWGGILCDQG 59
C GW G CDQ P C HG C + S+ C C + G LC+Q
Sbjct: 1363 HCEAGWVGLHCDQPADGPCHGHKCVHGQCVPLDALSYSCQCQDGYSGALCNQA 1415
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 14/58 (24%)
Query: 14 QCRPGWRGEFCDQCKP----YPGCK----------HGYCNGSSWQCICDTNWGGILCD 57
+CRPG+ G C +C P +P C H C+ S QC C G+ CD
Sbjct: 651 RCRPGYTGTACQECSPGFHGFPSCVPCHCSAEGSLHAACDPRSGQCSCRPRVTGLRCD 708
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 14/59 (23%)
Query: 14 QCRPGWRGEFCDQCKP----YPGCKH----------GYCNGSSWQCICDTNWGGILCDQ 58
+CRP G CD C P YP C+ G C+ + QC C N G CDQ
Sbjct: 1551 KCRPNVTGRRCDTCSPGFHGYPRCRPCDCHEAGTAPGVCDPLTGQCYCKENVQGPKCDQ 1609
>sp|A0JM12|MEG10_XENTR Multiple epidermal growth factor-like domains protein 10 OS=Xenopus
tropicalis GN=megf10 PE=2 SV=1
Length = 1114
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 11/61 (18%)
Query: 9 IRASVQCRPGWRGEFCDQCKPY----PGCKH-------GYCNGSSWQCICDTNWGGILCD 57
I + QC PGW G C Q P P C H YC+ +C C W G+ C
Sbjct: 683 IDGTCQCYPGWIGNDCSQACPPGHWGPNCIHTCNCHNGAYCSAYDGECKCSPGWTGLYCT 742
Query: 58 Q 58
Q
Sbjct: 743 Q 743
>sp|Q9VYN8|TENA_DROME Teneurin-a OS=Drosophila melanogaster GN=Ten-a PE=1 SV=2
Length = 3004
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 15 CRPGWRGEFCDQCKP-----YPGC-KHGYCNGSSWQCICDTNWGGILCDQG 59
C+ GW+GE C PGC +HG + + QC+C+ +W G C Q
Sbjct: 674 CKAGWQGEDCGTIDQQVYQCLPGCSEHGTYDLETGQCVCERHWTGPDCSQA 724
>sp|P82279|CRUM1_HUMAN Protein crumbs homolog 1 OS=Homo sapiens GN=CRB1 PE=1 SV=2
Length = 1406
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 14 QCRPGWRGEFC----DQCKPYPGCKHGYCNG--SSWQCICDTNWGGILCD 57
CRPG+ GE+C D+C P G C + +QC+CD + G C+
Sbjct: 1284 MCRPGFTGEWCEKDIDECASDPCVNGGLCQDLLNKFQCLCDVAFAGERCE 1333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.144 0.569
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,819,660
Number of Sequences: 539616
Number of extensions: 890552
Number of successful extensions: 4556
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 211
Number of HSP's that attempted gapping in prelim test: 2830
Number of HSP's gapped (non-prelim): 1619
length of query: 60
length of database: 191,569,459
effective HSP length: 33
effective length of query: 27
effective length of database: 173,762,131
effective search space: 4691577537
effective search space used: 4691577537
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)