Query psy17083
Match_columns 60
No_of_seqs 146 out of 1072
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 21:25:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17083.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17083hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vj3_A Neurogenic locus notch 99.1 1.4E-10 4.8E-15 60.8 4.6 49 10-59 65-120 (135)
2 4d90_A EGF-like repeat and dis 99.1 4.1E-10 1.4E-14 59.1 5.7 49 10-59 22-96 (143)
3 2vj2_A Jagged-1; signalling, p 99.1 5.3E-11 1.8E-15 64.6 2.0 46 11-57 83-128 (169)
4 2vj3_A Neurogenic locus notch 99.0 5.3E-10 1.8E-14 58.6 4.7 50 9-59 26-82 (135)
5 4d90_A EGF-like repeat and dis 99.0 9.7E-10 3.3E-14 57.7 4.9 48 10-58 79-133 (143)
6 1tpg_A T-plasminogen activator 98.9 1.5E-09 5E-14 53.8 4.6 49 9-60 30-88 (91)
7 2ygq_A WIF-1, WNT inhibitory f 98.8 9.5E-09 3.2E-13 60.6 5.4 54 4-58 157-212 (324)
8 3u7u_G Neuregulin 1; signaling 98.7 1.3E-08 4.3E-13 46.5 3.5 36 24-60 8-51 (55)
9 2p28_B Integrin beta-2; hybrid 98.7 1E-08 3.6E-13 57.7 3.4 55 2-58 98-175 (217)
10 2wg3_C Hedgehog-interacting pr 98.7 2.9E-09 9.9E-14 65.1 0.9 51 5-58 401-455 (463)
11 3fcs_B Integrin beta-3; beta p 98.7 2E-08 7E-13 64.0 4.2 54 3-58 537-600 (690)
12 2vj2_A Jagged-1; signalling, p 98.7 1.2E-08 4.1E-13 55.2 2.7 49 9-58 112-169 (169)
13 2ygq_A WIF-1, WNT inhibitory f 98.6 4.1E-08 1.4E-12 57.8 4.6 48 10-58 196-244 (324)
14 3k6s_B Integrin beta-2; cell r 98.6 1.2E-08 4.2E-13 65.0 2.0 52 5-58 532-592 (687)
15 2gy5_A Angiopoietin-1 receptor 98.6 7.6E-08 2.6E-12 58.5 5.0 56 3-58 206-278 (423)
16 2p28_B Integrin beta-2; hybrid 98.6 2.3E-08 7.7E-13 56.4 2.3 54 3-59 146-215 (217)
17 3k6s_B Integrin beta-2; cell r 98.6 4E-08 1.4E-12 62.7 3.5 54 3-58 438-514 (687)
18 1emn_A Fibrillin; extracellula 98.5 3.4E-08 1.2E-12 47.9 2.1 46 9-55 24-77 (82)
19 3fcs_B Integrin beta-3; beta p 98.5 1E-07 3.4E-12 60.9 3.4 53 3-57 496-559 (690)
20 1a3p_A Epidermal growth factor 98.4 2.6E-07 8.8E-12 40.3 3.5 29 31-60 10-43 (45)
21 1k36_A Epiregulin; EGF-like fo 98.4 2E-07 6.7E-12 41.0 3.0 29 30-59 12-44 (46)
22 2gy5_A Angiopoietin-1 receptor 98.4 4.5E-07 1.6E-11 55.1 5.5 50 9-59 261-321 (423)
23 1edm_B Factor IX; epidermal gr 98.4 3.9E-07 1.3E-11 38.4 3.3 32 26-58 5-39 (39)
24 1hae_A Heregulin-alpha; growth 98.4 8E-08 2.7E-12 44.6 1.2 37 23-60 5-49 (63)
25 1x7a_L Coagulation factor IX, 98.4 1.7E-07 5.9E-12 49.8 2.0 49 9-58 67-126 (146)
26 1egf_A Epidermal growth factor 98.3 1.2E-06 4.1E-11 39.3 4.1 29 31-60 13-46 (53)
27 1nfu_B Coagulation factor XA, 98.3 1.5E-07 5E-12 52.4 1.1 49 9-58 61-121 (195)
28 3ca7_A Protein spitz; argos, E 98.3 3.9E-08 1.3E-12 44.2 -1.3 40 11-59 3-49 (52)
29 2bou_A EGF-like module contain 98.3 8.9E-07 3.1E-11 46.4 3.6 48 8-56 16-81 (143)
30 1aut_L Activated protein C; se 98.3 6.8E-07 2.3E-11 45.5 2.9 44 9-53 33-85 (114)
31 2c4f_L Coagulation factor VII 98.2 1E-06 3.5E-11 46.4 3.6 49 9-58 66-129 (142)
32 2vh0_B Activated factor XA lig 98.2 2.7E-07 9.2E-12 48.3 1.1 49 9-58 61-121 (134)
33 3h5c_B Vitamin K-dependent pro 98.2 2.5E-06 8.5E-11 49.5 4.9 44 9-54 24-76 (317)
34 1z6c_A Vitamin K-dependent pro 98.2 3.4E-07 1.2E-11 44.7 0.9 47 9-58 23-78 (87)
35 1lmj_A Fibrillin 1; EGF, calci 98.2 2.7E-07 9.1E-12 45.0 0.1 47 9-55 23-80 (86)
36 1nql_B Epidermal growth factor 98.1 1.5E-06 5E-11 39.2 1.8 35 24-59 6-45 (53)
37 1z1y_A Ookinete surface protei 98.1 5.9E-07 2E-11 48.9 0.3 44 9-53 72-126 (186)
38 4aqs_A Laminin subunit beta-1; 98.0 1.5E-06 5.1E-11 53.7 1.7 50 9-58 458-525 (525)
39 1dx5_I Thrombomodulin; serine 98.0 9.3E-07 3.2E-11 45.3 0.6 44 9-54 59-111 (118)
40 2bou_A EGF-like module contain 98.0 1.5E-06 5.2E-11 45.5 1.4 48 9-57 66-133 (143)
41 1tpg_A T-plasminogen activator 98.0 7.2E-07 2.5E-11 44.0 0.1 42 10-57 1-44 (91)
42 4fbr_A Lectin, myxobacterial h 98.0 1.9E-08 6.5E-13 58.2 -6.6 52 9-60 51-137 (267)
43 2k2s_B Micronemal protein 6; m 98.0 7E-07 2.4E-11 41.4 -0.2 32 26-58 13-50 (61)
44 1dx5_I Thrombomodulin; serine 98.0 1.4E-06 5E-11 44.6 0.8 46 9-56 22-77 (118)
45 2p26_A Integrin beta-2; hybrid 97.9 9.3E-06 3.2E-10 47.3 3.4 53 3-57 199-274 (280)
46 1z1y_A Ookinete surface protei 97.9 2.2E-06 7.4E-11 46.7 0.7 47 10-58 115-175 (186)
47 2w2n_E LDL receptor, low-densi 97.9 2.4E-06 8.1E-11 43.3 0.3 45 9-55 48-101 (107)
48 1yo8_A Thrombospondin-2; EGF, 97.8 1.7E-05 5.9E-10 50.5 3.7 48 10-57 24-85 (634)
49 2ygo_A WIF-1, WNT inhibitory f 97.8 2.3E-05 7.7E-10 43.4 3.7 29 30-59 152-181 (188)
50 1klo_A Laminin; glycoprotein; 97.8 5.1E-06 1.8E-10 44.7 1.0 50 9-58 73-146 (162)
51 2w86_A Fibrillin-1, fibrillin1 97.8 3.2E-06 1.1E-10 44.5 -0.2 45 11-55 88-141 (147)
52 2wg3_C Hedgehog-interacting pr 97.7 5.1E-06 1.7E-10 50.9 0.4 45 12-59 378-424 (463)
53 4fbr_A Lectin, myxobacterial h 97.7 6.7E-08 2.3E-12 56.0 -7.7 52 9-60 118-204 (267)
54 1yo8_A Thrombospondin-2; EGF, 97.7 2.4E-05 8.2E-10 49.8 2.5 49 9-58 68-146 (634)
55 3v65_B Low-density lipoprotein 97.6 1.8E-05 6E-10 47.0 1.1 47 10-57 23-82 (386)
56 2c4f_L Coagulation factor VII 97.5 4E-05 1.4E-09 40.2 1.8 32 26-58 49-83 (142)
57 3p5b_L Low density lipoprotein 97.5 5.2E-05 1.8E-09 45.2 2.2 45 9-54 19-71 (400)
58 1xdt_R Hbegf, heparin-binding 97.5 9.4E-05 3.2E-09 35.8 2.7 27 33-59 48-78 (79)
59 1g1s_A P-selectin; selectin, l 97.5 5E-05 1.7E-09 40.2 1.8 32 27-59 122-156 (162)
60 2e26_A Reelin, reeler protein; 97.5 2.1E-05 7.1E-10 50.7 0.3 44 13-58 520-565 (725)
61 3e50_C Protransforming growth 97.4 0.00014 4.9E-09 32.3 2.6 26 33-58 16-45 (50)
62 1klo_A Laminin; glycoprotein; 97.4 6.8E-05 2.3E-09 40.3 1.8 48 11-58 18-91 (162)
63 1x7a_L Coagulation factor IX, 97.4 0.00017 5.9E-09 38.1 3.3 32 26-58 50-84 (146)
64 3h5c_B Vitamin K-dependent pro 97.3 9.8E-05 3.4E-09 42.7 2.2 34 26-60 7-43 (317)
65 1nfu_B Coagulation factor XA, 97.3 3.5E-05 1.2E-09 42.8 0.0 33 26-59 44-79 (195)
66 1g1t_A E-selectin; EGF, adhesi 97.3 7.9E-05 2.7E-09 39.1 1.4 33 27-60 122-157 (157)
67 3ltf_D Protein spitz; receptor 97.3 0.00014 4.8E-09 33.1 1.9 26 33-58 16-48 (58)
68 1aut_L Activated protein C; se 97.3 0.00026 9E-09 35.8 3.0 26 33-58 22-50 (114)
69 1iox_A Betacellulin; EGF-like 97.2 0.00012 4.2E-09 32.5 1.2 27 33-59 16-46 (50)
70 2vh0_B Activated factor XA lig 97.2 5.6E-05 1.9E-09 39.4 0.0 32 26-58 44-78 (134)
71 1emn_A Fibrillin; extracellula 97.1 0.00031 1.1E-08 33.7 2.3 30 26-56 7-41 (82)
72 3zyj_B Netrin-G1; cell adhesio 97.1 0.00012 4.1E-09 44.8 0.9 18 10-27 312-329 (426)
73 1uzk_A Fibrillin-1; glycoprote 97.1 3E-05 1E-09 41.3 -1.6 23 33-55 132-156 (162)
74 3nt1_A Prostaglandin-endoperox 97.1 0.00034 1.2E-08 44.3 2.8 33 26-59 3-40 (587)
75 2rnl_A Amphiregulin; AR, color 97.1 0.00043 1.5E-08 30.7 2.4 26 33-58 20-49 (50)
76 1k36_A Epiregulin; EGF-like fo 97.0 0.00026 8.8E-09 30.8 1.5 17 10-26 27-43 (46)
77 1q4g_A Prostaglandin G/H synth 97.0 0.00034 1.2E-08 44.0 2.0 33 26-59 4-41 (553)
78 3u7u_G Neuregulin 1; signaling 97.0 0.00031 1E-08 31.7 1.3 18 9-26 32-49 (55)
79 2ygo_A WIF-1, WNT inhibitory f 97.0 0.00065 2.2E-08 37.6 2.9 24 3-26 156-180 (188)
80 2w86_A Fibrillin-1, fibrillin1 96.8 0.00057 2E-08 35.7 2.1 30 25-55 5-36 (147)
81 1a3p_A Epidermal growth factor 96.8 0.00052 1.8E-08 29.4 1.5 18 9-26 24-41 (45)
82 1edm_B Factor IX; epidermal gr 96.8 0.00061 2.1E-08 28.2 1.6 17 9-25 22-38 (39)
83 3cfw_A L-selectin; EGF, cell a 96.7 0.0012 4E-08 34.9 2.7 27 33-59 127-156 (164)
84 2fd6_A Urokinase-type plasmino 96.6 0.0018 6.2E-08 33.3 2.9 42 12-57 20-62 (122)
85 1egf_A Epidermal growth factor 96.5 0.0015 5.1E-08 28.9 2.0 18 9-26 27-44 (53)
86 2w2n_E LDL receptor, low-densi 96.4 0.0017 5.9E-08 32.6 2.1 42 15-57 18-67 (107)
87 1nql_B Epidermal growth factor 96.4 0.00095 3.2E-08 29.8 1.0 17 10-26 28-44 (53)
88 1hae_A Heregulin-alpha; growth 96.4 0.0014 4.9E-08 29.9 1.5 17 9-25 30-46 (63)
89 1uzk_A Fibrillin-1; glycoprote 96.4 0.0016 5.6E-08 34.5 1.8 31 26-57 5-42 (162)
90 1n7d_A LDL receptor, low-densi 96.3 0.0022 7.6E-08 40.9 2.5 44 9-53 313-364 (699)
91 4aqt_A Laminin subunit gamma-1 96.3 0.0047 1.6E-07 37.3 3.7 50 9-58 270-350 (375)
92 2e26_A Reelin, reeler protein; 96.3 0.00087 3E-08 43.4 0.4 26 1-26 540-565 (725)
93 3ca7_A Protein spitz; argos, E 96.3 0.0017 5.7E-08 28.7 1.2 17 10-26 32-48 (52)
94 1lmj_A Fibrillin 1; EGF, calci 96.2 0.0019 6.4E-08 31.0 1.5 32 26-57 5-44 (86)
95 2fd6_A Urokinase-type plasmino 96.2 0.0012 4.2E-08 34.0 0.8 27 33-59 3-35 (122)
96 4aqs_A Laminin subunit beta-1; 96.2 0.0035 1.2E-07 38.8 2.9 22 37-58 454-475 (525)
97 3ltf_D Protein spitz; receptor 96.0 0.0022 7.7E-08 29.0 1.1 17 10-26 32-48 (58)
98 3e50_C Protransforming growth 96.0 0.0042 1.4E-07 27.5 1.8 18 9-26 28-45 (50)
99 1z6c_A Vitamin K-dependent pro 95.9 0.0015 5.2E-08 31.5 0.3 32 26-57 5-43 (87)
100 2i9a_A Urokinase-type plasmino 95.9 0.0074 2.5E-07 32.0 2.9 27 33-59 15-47 (145)
101 3asi_A Neurexin-1-alpha; beta- 95.5 0.011 3.7E-07 35.4 2.9 32 26-58 187-222 (410)
102 3m0c_C LDL receptor, low-densi 95.2 0.0067 2.3E-07 39.5 1.3 44 9-53 331-382 (791)
103 3qcw_A Neurexin-1-alpha; synap 94.7 0.026 8.9E-07 38.2 3.2 33 26-59 1019-1055(1245)
104 2y38_A Laminin subunit alpha-5 94.6 0.031 1.1E-06 34.1 3.0 48 11-58 286-373 (403)
105 1apq_A Complement protease C1R 94.5 0.038 1.3E-06 23.8 2.6 20 33-53 22-43 (53)
106 1xdt_R Hbegf, heparin-binding 94.4 0.018 6.1E-07 27.8 1.4 17 10-26 61-77 (79)
107 1g1s_A P-selectin; selectin, l 94.2 0.018 6.2E-07 30.1 1.4 18 9-26 138-155 (162)
108 2ddu_A Reelin; beta-jelly-roll 94.2 0.0048 1.6E-07 37.5 -1.1 23 1-23 197-219 (387)
109 3zyj_B Netrin-G1; cell adhesio 93.8 0.011 3.9E-07 36.3 0.0 46 10-58 351-398 (426)
110 3qcw_A Neurexin-1-alpha; synap 93.7 0.044 1.5E-06 37.1 2.7 32 26-58 621-656 (1245)
111 3cfw_A L-selectin; EGF, cell a 92.8 0.038 1.3E-06 28.9 1.1 17 10-26 139-155 (164)
112 3t3p_B Integrin beta-3; integr 92.6 0.037 1.3E-06 34.5 1.0 15 43-57 458-472 (472)
113 3p5b_L Low density lipoprotein 91.0 0.12 4.1E-06 30.8 1.9 22 36-57 12-38 (400)
114 3v4v_B Integrin beta-7; cell a 90.5 0.05 1.7E-06 34.2 0.0 21 4-24 472-492 (503)
115 3v65_B Low-density lipoprotein 88.4 0.088 3E-06 31.1 0.0 20 37-56 16-41 (386)
116 2p26_A Integrin beta-2; hybrid 88.4 0.29 9.8E-06 28.5 2.1 23 33-57 198-221 (280)
117 1gl4_A Nidogen-1, entactin; im 87.5 0.28 9.5E-06 28.8 1.7 24 33-56 15-43 (285)
118 1n7d_A LDL receptor, low-densi 87.4 0.44 1.5E-05 30.5 2.7 21 37-57 307-332 (699)
119 3fl7_A Ephrin receptor; ATP-bi 86.1 0.35 1.2E-05 30.3 1.8 50 4-53 254-320 (536)
120 3g5c_A ADAM 22; alpha/beta fol 83.7 0.38 1.3E-05 30.2 1.1 23 4-26 458-481 (510)
121 3nt1_A Prostaglandin-endoperox 82.7 0.42 1.4E-05 30.5 1.0 17 10-26 22-39 (587)
122 2jkh_L Factor X light chain; p 82.3 0.54 1.8E-05 20.5 1.1 19 33-52 11-31 (55)
123 1q4g_A Prostaglandin G/H synth 82.2 0.45 1.6E-05 30.1 1.0 17 10-26 23-40 (553)
124 3m0c_C LDL receptor, low-densi 81.5 1.1 3.7E-05 29.4 2.6 21 37-57 325-350 (791)
125 3t5o_A Complement component C6 80.9 1.1 3.6E-05 29.9 2.4 26 33-58 505-533 (913)
126 1szb_A Mannose binding lectin- 79.0 1.6 5.4E-05 22.9 2.4 24 33-57 137-166 (170)
127 3t3p_B Integrin beta-3; integr 78.4 0.87 3E-05 28.5 1.4 22 4-25 451-472 (472)
128 3g5c_A ADAM 22; alpha/beta fol 78.1 2.7 9.2E-05 26.4 3.5 25 33-58 456-481 (510)
129 2kl7_A Fibulin-4; secreted, ca 75.2 2 6.8E-05 19.7 1.9 6 47-52 57-62 (71)
130 2pe4_A Hyaluronidase-1; hyalur 73.6 1.9 6.6E-05 26.7 1.9 18 42-59 396-413 (424)
131 2bz6_L Blood coagulation facto 69.2 2 6.9E-05 18.5 1.1 16 37-52 12-30 (53)
132 2pe4_A Hyaluronidase-1; hyalur 66.9 2.9 9.8E-05 25.9 1.7 17 10-26 396-412 (424)
133 1ext_A Tumor necrosis factor r 64.9 2.6 8.8E-05 22.3 1.1 41 11-52 84-134 (162)
134 1kli_L Factor VIIA; extrinsic 64.4 2.8 9.5E-05 19.2 1.1 16 37-52 18-36 (69)
135 2wph_E Coagulation factor IXA 62.1 3.2 0.00011 18.3 1.0 16 37-52 12-30 (59)
136 1kig_L Factor XA; glycoprotein 59.9 0.8 2.7E-05 19.7 -1.2 12 41-52 17-28 (51)
137 1nzi_A Complement C1S componen 56.1 4.5 0.00015 20.7 1.1 24 33-57 128-157 (159)
138 3fby_A COMP, cartilage oligome 54.5 11 0.00037 24.2 2.7 27 30-57 27-59 (551)
139 3qd6_R CD40L receptor, tumor n 53.7 5.5 0.00019 21.3 1.2 25 11-35 81-107 (177)
140 3v64_C Agrin; beta propeller, 53.5 7.6 0.00026 22.5 1.9 16 37-52 13-30 (349)
141 3me4_A Tumor necrosis factor r 48.6 17 0.00059 20.2 2.7 43 11-53 109-159 (216)
142 1ob1_C Major merozoite surface 44.7 28 0.00095 17.3 2.8 19 35-53 15-36 (99)
143 3k51_B Decoy receptor 3; DCR3, 41.7 22 0.00074 19.1 2.4 41 11-52 84-131 (176)
144 3alq_R Tumor necrosis factor r 38.7 19 0.00064 19.1 1.8 43 11-53 84-138 (173)
145 3urf_Z Tumor necrosis factor r 38.3 22 0.00075 19.0 2.1 42 11-53 82-130 (171)
146 2lkq_A Immunoglobulin lambda-l 35.5 14 0.00049 13.4 0.7 8 18-25 18-25 (26)
147 1n1i_A Merozoite surface prote 34.9 35 0.0012 17.1 2.3 20 35-54 21-43 (105)
148 2uwi_A CRME protein; receptor, 31.6 13 0.00044 19.2 0.4 27 11-37 79-111 (142)
No 1
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.09 E-value=1.4e-10 Score=60.78 Aligned_cols=49 Identities=35% Similarity=0.941 Sum_probs=34.3
Q ss_pred CCeeEcCCCCcCCCCC----CCCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083 10 RASVQCRPGWRGEFCD----QCKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~----~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~ 59 (60)
.+.|.|++||+|..|+ +|...+ |. +++|++ +.++|.|++||.|..|+.+
T Consensus 65 ~~~C~C~~G~~G~~C~~~~~~C~~~~-C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~ 120 (135)
T 2vj3_A 65 EFQCICMPGYEGVHCEVNTDECASSP-CLHNGRCLDKINEFQCECPTGFTGHLCQVD 120 (135)
T ss_dssp CEEEECCTTEESSSSCEECCTTTTCC-STTTCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred CceeeCCCCCcCCcceecCCcccCCC-cCCCCEeECCCCCeEEECCCCCcCCccCcc
Confidence 4577888888887775 355555 76 467775 5577888888888887654
No 2
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.07 E-value=4.1e-10 Score=59.13 Aligned_cols=49 Identities=31% Similarity=0.895 Sum_probs=39.3
Q ss_pred CCeeEcCCCCcCCCCCC----------------CCCCCCCC-CCeEE-------c--CCCeEEeCCCcccCCCCcC
Q psy17083 10 RASVQCRPGWRGEFCDQ----------------CKPYPGCK-HGYCN-------G--SSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~~----------------c~~~~~C~-~g~C~-------~--~~~~C~C~~g~~G~~C~~~ 59 (60)
.+.|.|++||+|..|+. |...| |. +++|+ + +.+.|.|++||.|..|+.+
T Consensus 22 ~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~-C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~ 96 (143)
T 4d90_A 22 SFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNP-CHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHN 96 (143)
T ss_dssp CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCC-CCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEE
T ss_pred CEEeECCCCCCCCCCccCccccccccccccCCcCCCCC-CCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccC
Confidence 57899999999999864 44445 76 47898 3 5789999999999999744
No 3
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.06 E-value=5.3e-11 Score=64.56 Aligned_cols=46 Identities=59% Similarity=1.630 Sum_probs=19.1
Q ss_pred CeeEcCCCCcCCCCCCCCCCCCCCCCeEEcCCCeEEeCCCcccCCCC
Q psy17083 11 ASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCD 57 (60)
Q Consensus 11 ~~C~C~~g~~g~~C~~c~~~~~C~~g~C~~~~~~C~C~~g~~G~~C~ 57 (60)
++|+|++||+|..|++|...+.|.+|+|+ ..++|.|++||.|..|+
T Consensus 83 ~~C~C~~G~~G~~C~~C~~~~~C~~g~C~-~~~~C~C~~G~~G~~C~ 128 (169)
T 2vj2_A 83 GDCRCQYGWQGLYCDKCIPHPGCVHGICN-EPWQCLCETNWGGQLCD 128 (169)
T ss_dssp TCCEECTTEESSSSCEECCCTTCSSEECS-STTCCEECTTEETTTTC
T ss_pred CeeECCCCCCCCCcccCCCCCCCCCCCcC-CCCEEeCCCCCCCCccc
Confidence 44444444444444443333333333343 33444444444444443
No 4
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.01 E-value=5.3e-10 Score=58.57 Aligned_cols=50 Identities=30% Similarity=0.846 Sum_probs=41.5
Q ss_pred CCCeeEcCCCCcCCCCC----CCCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083 9 IRASVQCRPGWRGEFCD----QCKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~----~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~ 59 (60)
..+.|.|++||+|..|+ +|...+ |. +++|++ +.+.|.|++||.|..|+.+
T Consensus 26 g~~~C~C~~Gy~G~~C~~~~~~C~~~~-C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~ 82 (135)
T 2vj3_A 26 GSFECQCLQGYTGPRCEIDVNECVSNP-CQNDATCLDQIGEFQCICMPGYEGVHCEVN 82 (135)
T ss_dssp SSEEEECCTTEESTTSCEECCTTTTCC-CCSSCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred CCEEEECCCCCcCCcccccCccCCCCC-CCCCCEEeCCCCCceeeCCCCCcCCcceec
Confidence 34699999999999996 476666 87 579986 6689999999999999754
No 5
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.98 E-value=9.7e-10 Score=57.68 Aligned_cols=48 Identities=29% Similarity=0.834 Sum_probs=41.2
Q ss_pred CCeeEcCCCCcCCCCC----CCCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCc
Q psy17083 10 RASVQCRPGWRGEFCD----QCKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~----~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~ 58 (60)
.+.|.|++||+|.+|+ +|...+ |. +++|++ +.|+|.|++||.|..|+.
T Consensus 79 ~~~C~C~~G~~G~~C~~~i~~C~~~~-C~~~~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 79 GYVCKCPRGFNGIHCQHNINECEVEP-CKNGGICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp CEEEECCTTEESTTSCEECCTTTTCC-SCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred CeEeECcCCCcCCCcccCCCcCCCCC-CCCCCEeECCCCCeEeECCCCCccCCcee
Confidence 6799999999999996 477677 87 579986 668999999999999975
No 6
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.95 E-value=1.5e-09 Score=53.84 Aligned_cols=49 Identities=24% Similarity=0.637 Sum_probs=40.5
Q ss_pred CCCeeEcCCCCcCCCCC-----CCCCCCCCCC-CeEEc----CCCeEEeCCCcccCCCCcCC
Q psy17083 9 IRASVQCRPGWRGEFCD-----QCKPYPGCKH-GYCNG----SSWQCICDTNWGGILCDQGH 60 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~-----~c~~~~~C~~-g~C~~----~~~~C~C~~g~~G~~C~~~~ 60 (60)
..+.|.|++||+ .|+ .|...| |.+ |+|++ +.+.|.|++||.|..|+++|
T Consensus 30 ~~y~C~C~~G~~--~C~~~~~~~C~~~p-C~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~i 88 (91)
T 1tpg_A 30 RVEYCWCNSGRA--QCHSVPVKSCSEPR-CFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 88 (91)
T ss_dssp CEEEEECSSSCC--BCCEECEEECSSCC-SCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred CCcEeECCCCCc--ccccCcCCcccCCC-CCCCCEeecCCCCCCeEeECCCCCcCCcCCcCC
Confidence 357899999998 785 377777 985 79985 56899999999999998765
No 7
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.80 E-value=9.5e-09 Score=60.57 Aligned_cols=54 Identities=30% Similarity=0.691 Sum_probs=34.8
Q ss_pred CCCcc-CCCeeEcCCCCcCCCCCCCCCCCCCC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083 4 RLGRN-IRASVQCRPGWRGEFCDQCKPYPGCK-HGYCNGSSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 4 ~~g~~-~~~~C~C~~g~~g~~C~~c~~~~~C~-~g~C~~~~~~C~C~~g~~G~~C~~ 58 (60)
.+|.+ ..+.|.|++||+|..|+.-...+.|. +|+|+ ..+.|.|++||.|..|+.
T Consensus 157 ~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~-~~~~C~C~~G~~G~~C~~ 212 (324)
T 2ygq_A 157 NGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLCV-TPGFCICPPGFYGVNCDK 212 (324)
T ss_dssp SSCEECTTSCEECCTTEESSSSCEESSSSCCCTTCEEC-SSCCEECCTTCBTTTTCB
T ss_pred CCCEECCCCeEECCCCCcCCCCCCCCCCCCCCCCCEEc-CCCEEeCCCCccCCCccc
Confidence 34443 35778888888888876422223366 46777 357777877887777764
No 8
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.73 E-value=1.3e-08 Score=46.51 Aligned_cols=36 Identities=25% Similarity=0.602 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCC-CeEE-----c--CCCeEEeCCCcccCCCCcCC
Q psy17083 24 CDQCKPYPGCKH-GYCN-----G--SSWQCICDTNWGGILCDQGH 60 (60)
Q Consensus 24 C~~c~~~~~C~~-g~C~-----~--~~~~C~C~~g~~G~~C~~~~ 60 (60)
+++|...| |+| |+|. + ..|+|.|++||+|..|+..|
T Consensus 8 ~~eC~s~p-C~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v 51 (55)
T 3u7u_G 8 CAEKEKTF-CVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYV 51 (55)
T ss_dssp CCSTTTTT-SCTTCEEEEECCC--CCCEEEEECTTEESTTSCEEC
T ss_pred CCCCcCCC-CCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccC
Confidence 35788888 995 7994 2 57899999999999999764
No 9
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.71 E-value=1e-08 Score=57.74 Aligned_cols=55 Identities=27% Similarity=0.573 Sum_probs=42.4
Q ss_pred CCCCCccCCCeeEcCCCCcCCCCCC-------------CCC---CCCCC-CCeEEcCCCeEEeCCC------cccCCCCc
Q psy17083 2 SNRLGRNIRASVQCRPGWRGEFCDQ-------------CKP---YPGCK-HGYCNGSSWQCICDTN------WGGILCDQ 58 (60)
Q Consensus 2 ~~~~g~~~~~~C~C~~g~~g~~C~~-------------c~~---~~~C~-~g~C~~~~~~C~C~~g------~~G~~C~~ 58 (60)
.+.||.+..+.|.|.+||+|.+|+- |.. ...|. +|+|+. ++|.|.++ |+|..|+.
T Consensus 98 Csg~G~C~~g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~--g~C~C~~gw~~~~~~~G~~Ce~ 175 (217)
T 2p28_B 98 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--GQCLCHTSDVPGKLIYGQYCEC 175 (217)
T ss_dssp TTTSEEEETTEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET--TEEEECCCCSTTCCEESTTSCE
T ss_pred cCCCceEECCEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC--CceECCCCCCCcccEECCCccc
Confidence 3567887789999999999999961 321 12266 589995 78999999 69999974
No 10
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.69 E-value=2.9e-09 Score=65.12 Aligned_cols=51 Identities=37% Similarity=1.074 Sum_probs=18.0
Q ss_pred CCccC-CCeeEcCCCCcCCCCCC--CCCCCCCCC-CeEEcCCCeEEeCCCcccCCCCc
Q psy17083 5 LGRNI-RASVQCRPGWRGEFCDQ--CKPYPGCKH-GYCNGSSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 5 ~g~~~-~~~C~C~~g~~g~~C~~--c~~~~~C~~-g~C~~~~~~C~C~~g~~G~~C~~ 58 (60)
||.+. .++|.|++||+|..|+. |.. + |.+ |+|+ ..+.|.|++||+|..|+.
T Consensus 401 nG~C~~~~~C~C~~G~~G~~C~~~~C~~-~-C~~~g~C~-~~~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 401 NGYCTPTGKCCCSPGWEGDFCRTAKCEP-A-CRHGGVCV-RPNKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp SEEECTTSCEEECTTEESTTSCEECC--------------------------------
T ss_pred CCccCCCCeECCCCCcCCCcCCcCcCCC-C-CCCCCEEC-CCCEEECCCCcccCCCCC
Confidence 35443 47999999999999973 654 4 985 7999 458999999999999975
No 11
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.67 E-value=2e-08 Score=64.04 Aligned_cols=54 Identities=24% Similarity=0.684 Sum_probs=42.8
Q ss_pred CCCCccCCCeeEcCCCCcCCCCC------CCCCC--CCCC-CCeEEcCCCeEEe-CCCcccCCCCc
Q psy17083 3 NRLGRNIRASVQCRPGWRGEFCD------QCKPY--PGCK-HGYCNGSSWQCIC-DTNWGGILCDQ 58 (60)
Q Consensus 3 ~~~g~~~~~~C~C~~g~~g~~C~------~c~~~--~~C~-~g~C~~~~~~C~C-~~g~~G~~C~~ 58 (60)
..||.+..+.|.|++||+|..|+ .|... ..|. +|+|+. +.|.| ++||.|..|+.
T Consensus 537 ~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~--g~C~C~~~Gy~G~~Ce~ 600 (690)
T 3fcs_B 537 SGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC--GSCVCIQPGSYGDTCEK 600 (690)
T ss_dssp GGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET--TEEECCSTTCBSTTSCB
T ss_pred CCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC--CEEECCCCCccCCCcCc
Confidence 34677777999999999999997 35431 1277 589985 79999 99999999985
No 12
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.66 E-value=1.2e-08 Score=55.21 Aligned_cols=49 Identities=31% Similarity=0.904 Sum_probs=39.9
Q ss_pred CCCeeEcCCCCcCCCCCC----CCC-CCCCC-CCeEEc---CCCeEEeCCCcccCCCCc
Q psy17083 9 IRASVQCRPGWRGEFCDQ----CKP-YPGCK-HGYCNG---SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~----c~~-~~~C~-~g~C~~---~~~~C~C~~g~~G~~C~~ 58 (60)
..++|.|++||+|..|+. |.. .+ |. +|+|++ +.++|.|++||+|..|++
T Consensus 112 ~~~~C~C~~G~~G~~C~~~~~~C~~~~~-C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 112 EPWQCLCETNWGGQLCDKDLNYCGTHQP-CLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp STTCCEECTTEETTTTCEESCHHHHTCC-CCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred CCCEEeCCCCCCCCcccCCCCCCCCCCC-CCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 468999999999999972 443 45 88 479985 458999999999999974
No 13
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.63 E-value=4.1e-08 Score=57.85 Aligned_cols=48 Identities=29% Similarity=0.638 Sum_probs=28.1
Q ss_pred CCeeEcCCCCcCCCCCCCCCCCCCC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083 10 RASVQCRPGWRGEFCDQCKPYPGCK-HGYCNGSSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~~c~~~~~C~-~g~C~~~~~~C~C~~g~~G~~C~~ 58 (60)
++.|.|++||+|..|+.-.....|. +|+|+ ..+.|.|++||.|..|+.
T Consensus 196 ~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~-~~~~C~C~~G~~G~~C~~ 244 (324)
T 2ygq_A 196 PGFCICPPGFYGVNCDKANCSTTCFNGGTCF-YPGKCICPPGLEGEQCEI 244 (324)
T ss_dssp SCCEECCTTCBTTTTCBCCCSSCCCSSCCBS-CSSCBCCCTTCCTTTTC-
T ss_pred CCEEeCCCCccCCCcccCcCCCCCCCCCeeC-CCCeeeCCCCccCCCCCc
Confidence 4677777777777775321112255 35665 345666666666666653
No 14
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.61 E-value=1.2e-08 Score=65.01 Aligned_cols=52 Identities=27% Similarity=0.698 Sum_probs=41.5
Q ss_pred CCccCCCeeEcCCCCcCCCCC------CCCCC--CCCC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083 5 LGRNIRASVQCRPGWRGEFCD------QCKPY--PGCK-HGYCNGSSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 5 ~g~~~~~~C~C~~g~~g~~C~------~c~~~--~~C~-~g~C~~~~~~C~C~~g~~G~~C~~ 58 (60)
||.+..+.|.|.+||+|..|+ .|... ..|. +|+|.. ++|.|.+||.|..|++
T Consensus 532 ~G~C~~g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~--g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 532 RGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC--NVCECHSGYQLPLCQE 592 (687)
T ss_dssp HEEEETTEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS--SCBCCSTTCCTTTTCC
T ss_pred CCeEECCEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC--CEEECCCCCcCCCCCC
Confidence 666777899999999999997 24432 1276 578885 7899999999999985
No 15
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.59 E-value=7.6e-08 Score=58.46 Aligned_cols=56 Identities=30% Similarity=0.843 Sum_probs=42.1
Q ss_pred CCCCccC--CCeeEcCCCCcCCCCCC-CCC-------------CCCCC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083 3 NRLGRNI--RASVQCRPGWRGEFCDQ-CKP-------------YPGCK-HGYCNGSSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 3 ~~~g~~~--~~~C~C~~g~~g~~C~~-c~~-------------~~~C~-~g~C~~~~~~C~C~~g~~G~~C~~ 58 (60)
..+|.+. .+.|.|++||+|.+|+. |.. ...|. ++.|....++|.|++||.|..|+.
T Consensus 206 ~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~ 278 (423)
T 2gy5_A 206 MNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNE 278 (423)
T ss_dssp CTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCB
T ss_pred CCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCcccccccC
Confidence 3456544 58999999999999984 421 22255 368877789999999999998874
No 16
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.58 E-value=2.3e-08 Score=56.38 Aligned_cols=54 Identities=26% Similarity=0.762 Sum_probs=42.8
Q ss_pred CCCCccCCCeeEcCCC------CcCCCCC----CCCCC---CCCC-C--CeEEcCCCeEEeCCCcccCCCCcC
Q psy17083 3 NRLGRNIRASVQCRPG------WRGEFCD----QCKPY---PGCK-H--GYCNGSSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 3 ~~~g~~~~~~C~C~~g------~~g~~C~----~c~~~---~~C~-~--g~C~~~~~~C~C~~g~~G~~C~~~ 59 (60)
+.||.+..+.|.|.+| |+|.+|+ .|... + |. + |+|.. ++|.|.+||+|..|+..
T Consensus 146 sg~G~C~~g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~-C~~~~~G~C~~--g~C~C~~G~~G~~C~~~ 215 (217)
T 2p28_B 146 SGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQV-CGGPGRGLCFC--GKCRCHPGFEGSACQHH 215 (217)
T ss_dssp GGTEEEETTEEEECCCCSTTCCEESTTSCEESSCSCEETTEE-TTCTTTEEEET--TEEEECTTEESTTSCEE
T ss_pred CCCCEEeCCceECCCCCCCcccEECCCcccCCccCCCCCCCC-CCCCCCcEEeC--CeeECCCCCccCCcCCC
Confidence 4567777889999999 5999997 25433 3 76 5 89995 79999999999999853
No 17
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.57 E-value=4e-08 Score=62.71 Aligned_cols=54 Identities=26% Similarity=0.565 Sum_probs=42.8
Q ss_pred CCCCccCCCeeEcCCCCcCCCCC-------------CCCCCC---CCC-CCeEEcCCCeEEeC------CCcccCCCCc
Q psy17083 3 NRLGRNIRASVQCRPGWRGEFCD-------------QCKPYP---GCK-HGYCNGSSWQCICD------TNWGGILCDQ 58 (60)
Q Consensus 3 ~~~g~~~~~~C~C~~g~~g~~C~-------------~c~~~~---~C~-~g~C~~~~~~C~C~------~g~~G~~C~~ 58 (60)
+.||.+..+.|.|.+||+|.+|+ .|...+ .|. +|+|+. ++|.|+ +||.|..|+.
T Consensus 438 s~~G~C~~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~--G~C~C~~~~~~~~G~~G~~Ce~ 514 (687)
T 3k6s_B 438 HGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--GQCLCHTSDVPGKLIYGQYCEC 514 (687)
T ss_dssp GGSEEESSSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET--TEEEECCCCSTTCCEESTTSCE
T ss_pred CCCCEEeCCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC--CEEEcCCCCCCCCCcccccccc
Confidence 45677778999999999999997 254321 276 589994 799999 9999999973
No 18
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.54 E-value=3.4e-08 Score=47.89 Aligned_cols=46 Identities=24% Similarity=0.686 Sum_probs=37.2
Q ss_pred CCCeeEcCCCCc--CCCCC---CCC-CCCCCCCCeEEc--CCCeEEeCCCcccCC
Q psy17083 9 IRASVQCRPGWR--GEFCD---QCK-PYPGCKHGYCNG--SSWQCICDTNWGGIL 55 (60)
Q Consensus 9 ~~~~C~C~~g~~--g~~C~---~c~-~~~~C~~g~C~~--~~~~C~C~~g~~G~~ 55 (60)
..|.|.|++||. |..|+ +|. ..+ |.+++|++ +.|.|.|++||.|..
T Consensus 24 g~y~C~C~~Gy~~~g~~C~dideC~~~~~-C~~~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 24 GSYRCECPFGYILAGNECVDTDECSVGNP-CGNGTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp SCCCEECCTTEEEETTEEEECCGGGTCCT-TSSSCEEECSSSEEECCSSSSCCCS
T ss_pred CCEEEECCCCeECCCCccCCcccccCCCC-CCCCEeECCCCCEEeECCCCeEeCC
Confidence 468999999997 88884 465 455 88789987 779999999998754
No 19
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.47 E-value=1e-07 Score=60.92 Aligned_cols=53 Identities=30% Similarity=0.938 Sum_probs=42.9
Q ss_pred CCCCccCCCeeEcC----CCCcCCCCC----CCCCC--CCCC-CCeEEcCCCeEEeCCCcccCCCC
Q psy17083 3 NRLGRNIRASVQCR----PGWRGEFCD----QCKPY--PGCK-HGYCNGSSWQCICDTNWGGILCD 57 (60)
Q Consensus 3 ~~~g~~~~~~C~C~----~g~~g~~C~----~c~~~--~~C~-~g~C~~~~~~C~C~~g~~G~~C~ 57 (60)
+.+|.+..+.|.|+ +||+|.+|+ .|... ..|. +|+|.. +.|.|++||.|..|+
T Consensus 496 s~~G~C~~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~--g~C~C~~Gy~G~~Ce 559 (690)
T 3fcs_B 496 SQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC--GDCLCDSDWTGYYCN 559 (690)
T ss_dssp GGSEEECSSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET--TEEEECTTEESSSSC
T ss_pred CCCCEEECCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC--CeeECcCCCcCCCCc
Confidence 45677778999999 999999996 25432 2377 689985 999999999999998
No 20
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.45 E-value=2.6e-07 Score=40.25 Aligned_cols=29 Identities=24% Similarity=0.582 Sum_probs=24.3
Q ss_pred CCCCC-CeEE--c--CCCeEEeCCCcccCCCCcCC
Q psy17083 31 PGCKH-GYCN--G--SSWQCICDTNWGGILCDQGH 60 (60)
Q Consensus 31 ~~C~~-g~C~--~--~~~~C~C~~g~~G~~C~~~~ 60 (60)
| |.+ |+|+ + +.+.|.|++||+|..|+.+|
T Consensus 10 p-C~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 10 Y-CLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp C-CSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred C-CCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 6 885 7997 3 67899999999999998754
No 21
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.44 E-value=2e-07 Score=40.98 Aligned_cols=29 Identities=31% Similarity=0.683 Sum_probs=24.8
Q ss_pred CCCCCCCeEEc----CCCeEEeCCCcccCCCCcC
Q psy17083 30 YPGCKHGYCNG----SSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 30 ~~~C~~g~C~~----~~~~C~C~~g~~G~~C~~~ 59 (60)
.| |.||+|.. +.+.|.|++||+|..|+.+
T Consensus 12 ~p-C~nG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 12 GY-CLHGQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp SS-CSSEEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred CC-CCCCEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 66 99899984 3689999999999999865
No 22
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.44 E-value=4.5e-07 Score=55.09 Aligned_cols=50 Identities=28% Similarity=0.925 Sum_probs=38.9
Q ss_pred CCCeeEcCCCCcCCCCCC-CCCC--------C-CCC-CCeEEcCCCeEEeCCCcccCCCCcC
Q psy17083 9 IRASVQCRPGWRGEFCDQ-CKPY--------P-GCK-HGYCNGSSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~-c~~~--------~-~C~-~g~C~~~~~~C~C~~g~~G~~C~~~ 59 (60)
..+.|.|++||+|.+|+. |... + .|. +|+|.. ...|.|++||.|..|+..
T Consensus 261 ~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~-~~~C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 261 DPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDR-FQGCLCSPGWQGLQCERE 321 (423)
T ss_dssp TTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEET-TTEEECCTTCBSTTSCBC
T ss_pred CCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecC-CCceECCCCCcCCCCccC
Confidence 468999999999999985 5432 0 265 468984 456999999999999864
No 23
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.40 E-value=3.9e-07 Score=38.39 Aligned_cols=32 Identities=34% Similarity=0.980 Sum_probs=26.1
Q ss_pred CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCc
Q psy17083 26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~ 58 (60)
+|...| |.+ |+|++ +.+.|.|++||.|..|+.
T Consensus 5 ~C~~~p-C~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 5 QCESNP-CLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp TTTTCC-CCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred cCCCCC-CCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 466677 885 79986 678999999999999973
No 24
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.39 E-value=8e-08 Score=44.60 Aligned_cols=37 Identities=24% Similarity=0.595 Sum_probs=28.8
Q ss_pred CCCCCCCCCCCCC-CeEEc-------CCCeEEeCCCcccCCCCcCC
Q psy17083 23 FCDQCKPYPGCKH-GYCNG-------SSWQCICDTNWGGILCDQGH 60 (60)
Q Consensus 23 ~C~~c~~~~~C~~-g~C~~-------~~~~C~C~~g~~G~~C~~~~ 60 (60)
.|+.|...| |.+ |+|+. +.+.|.|++||+|..|+.+|
T Consensus 5 ~c~~C~~~p-C~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i 49 (63)
T 1hae_A 5 KCAEKEKTF-CVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49 (63)
T ss_dssp ECCHHHHTT-SCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEEC
T ss_pred ccCCCCCCc-CCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCc
Confidence 355666677 985 79973 56899999999999998653
No 25
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.35 E-value=1.7e-07 Score=49.78 Aligned_cols=49 Identities=29% Similarity=0.750 Sum_probs=37.3
Q ss_pred CCCeeEcCCCCcCCCCC---CCCCCC-CCCCCeE-Ec--CCCeEEeCCCcc----cCCCCc
Q psy17083 9 IRASVQCRPGWRGEFCD---QCKPYP-GCKHGYC-NG--SSWQCICDTNWG----GILCDQ 58 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~---~c~~~~-~C~~g~C-~~--~~~~C~C~~g~~----G~~C~~ 58 (60)
..|.|.|++||+|..|+ +|...+ .|.+ +| ++ +.|.|.|++||. |..|+.
T Consensus 67 ~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~ 126 (146)
T 1x7a_L 67 NSYECWCQVGFEGKNCELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQKSCKP 126 (146)
T ss_dssp SCEEEECCSSEESTTTCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEECTTSSSEEE
T ss_pred CCEEEecCCCCcCCcCCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEeCCCCCcCCC
Confidence 36799999999999996 355432 2554 78 55 779999999999 777753
No 26
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.31 E-value=1.2e-06 Score=39.32 Aligned_cols=29 Identities=28% Similarity=0.716 Sum_probs=24.4
Q ss_pred CCCCC-CeEE--c--CCCeEEeCCCcccCCCCcCC
Q psy17083 31 PGCKH-GYCN--G--SSWQCICDTNWGGILCDQGH 60 (60)
Q Consensus 31 ~~C~~-g~C~--~--~~~~C~C~~g~~G~~C~~~~ 60 (60)
| |.+ |+|+ . +.+.|.|++||+|..|+.++
T Consensus 13 p-C~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 13 Y-CLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46 (53)
T ss_dssp S-SCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred c-CCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence 6 885 7998 4 67899999999999998753
No 27
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.30 E-value=1.5e-07 Score=52.36 Aligned_cols=49 Identities=24% Similarity=0.692 Sum_probs=22.5
Q ss_pred CCCeeEcCCCCcCCCCCC-----CCCCC-CCCCCeEEc--CCCeEEeCCCcc----cCCCCc
Q psy17083 9 IRASVQCRPGWRGEFCDQ-----CKPYP-GCKHGYCNG--SSWQCICDTNWG----GILCDQ 58 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~-----c~~~~-~C~~g~C~~--~~~~C~C~~g~~----G~~C~~ 58 (60)
..|.|.|++||+|..|+. |...+ .|.+ +|++ +.|.|.|++||. |..|+.
T Consensus 61 g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 61 GEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp --------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CCeeEeCCCCceeccccccccccccCCCCCCCC-EeECCCCCeEEECCCCceeCCCCCcccc
Confidence 458999999999999963 54321 2655 8886 678999999999 888864
No 28
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=98.28 E-value=3.9e-08 Score=44.20 Aligned_cols=40 Identities=18% Similarity=0.593 Sum_probs=30.7
Q ss_pred CeeEcCCCCcCCCCCCCCCCCCCCC-CeEEc------CCCeEEeCCCcccCCCCcC
Q psy17083 11 ASVQCRPGWRGEFCDQCKPYPGCKH-GYCNG------SSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 11 ~~C~C~~g~~g~~C~~c~~~~~C~~-g~C~~------~~~~C~C~~g~~G~~C~~~ 59 (60)
.+|.|+++|+ ..| |.| |+|+. ..+.|.|++||+|..|+..
T Consensus 3 ~~C~C~~g~~--------~~p-C~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 3 PTYKCPETFD--------AWY-CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp CCBCCCHHHH--------HHT-SCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred eeeECCCCCc--------CCc-CCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 3688888887 345 875 68983 3579999999999999853
No 29
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.27 E-value=8.9e-07 Score=46.42 Aligned_cols=48 Identities=25% Similarity=0.763 Sum_probs=36.5
Q ss_pred cCCCeeEcCCCCcC---------CCCC---CCCCC---CCCC-CCeEEc--CCCeEEeCCCcccCCC
Q psy17083 8 NIRASVQCRPGWRG---------EFCD---QCKPY---PGCK-HGYCNG--SSWQCICDTNWGGILC 56 (60)
Q Consensus 8 ~~~~~C~C~~g~~g---------~~C~---~c~~~---~~C~-~g~C~~--~~~~C~C~~g~~G~~C 56 (60)
...+.|.|++||+| ..|+ +|... + |. +++|++ +.|.|.|++||.|..+
T Consensus 16 ~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~-C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 16 VNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVS-CGKFSDCWNTEGSYDCVCSPGYEPVSG 81 (143)
T ss_dssp SSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----C-CCTTEEEEECSSCEEEEECTTEEETTC
T ss_pred cCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCC-CCCCCEEEcCCCCeEeECCCCcccCcC
Confidence 34589999999998 4663 46554 4 87 478986 6789999999998744
No 30
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.26 E-value=6.8e-07 Score=45.53 Aligned_cols=44 Identities=36% Similarity=0.939 Sum_probs=32.6
Q ss_pred CCCeeEcCCCCcCCCCCC------CCCCC-CCCCCeEEc--CCCeEEeCCCccc
Q psy17083 9 IRASVQCRPGWRGEFCDQ------CKPYP-GCKHGYCNG--SSWQCICDTNWGG 53 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~------c~~~~-~C~~g~C~~--~~~~C~C~~g~~G 53 (60)
..|.|.|++||+|..|+. |...+ .|.+ +|++ +.|.|.|++||.+
T Consensus 33 ~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~ 85 (114)
T 1aut_L 33 GSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKL 85 (114)
T ss_dssp SCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEE
T ss_pred CCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeE
Confidence 457999999999999974 32211 1322 7886 7799999999984
No 31
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.25 E-value=1e-06 Score=46.44 Aligned_cols=49 Identities=22% Similarity=0.631 Sum_probs=36.4
Q ss_pred CCCeeEcCCCCcCCCCCC----CCCCCCCCC-C---eEEc--C-CCeEEeCCCcc----cCCCCc
Q psy17083 9 IRASVQCRPGWRGEFCDQ----CKPYPGCKH-G---YCNG--S-SWQCICDTNWG----GILCDQ 58 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~----c~~~~~C~~-g---~C~~--~-~~~C~C~~g~~----G~~C~~ 58 (60)
..|.|.|++||+|..|+. +..-+ +.+ + +|++ + .|.|.|++||. |..|+.
T Consensus 66 g~y~C~C~~G~~G~~C~~~~~~c~~c~-~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 66 QSYICFCLPAFEGRNCETHKDDQLICV-NENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp TEEEEECCTTEESTTSCEEGGGCCSTT-TGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred CCEEeeCCCCccCCccccCcccccccc-CCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCC
Confidence 357999999999999974 21122 332 3 7886 5 89999999999 888753
No 32
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.23 E-value=2.7e-07 Score=48.31 Aligned_cols=49 Identities=24% Similarity=0.692 Sum_probs=21.7
Q ss_pred CCCeeEcCCCCcCCCCCC-----CCCCC-CCCCCeEEc--CCCeEEeCCCcc----cCCCCc
Q psy17083 9 IRASVQCRPGWRGEFCDQ-----CKPYP-GCKHGYCNG--SSWQCICDTNWG----GILCDQ 58 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~-----c~~~~-~C~~g~C~~--~~~~C~C~~g~~----G~~C~~ 58 (60)
..|.|.|++||+|..|+. |...+ .|.+ +|++ +.|.|.|++||. |..|+.
T Consensus 61 ~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 61 GEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp --------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CCEEeeCCCCccCCccccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcEECCCCCccCc
Confidence 357999999999999964 43321 2554 8876 678999999999 888853
No 33
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.21 E-value=2.5e-06 Score=49.47 Aligned_cols=44 Identities=30% Similarity=0.866 Sum_probs=36.3
Q ss_pred CCCeeEcCCCCcCCCCC----CCCC---CCCCCCCeEEc--CCCeEEeCCCcccC
Q psy17083 9 IRASVQCRPGWRGEFCD----QCKP---YPGCKHGYCNG--SSWQCICDTNWGGI 54 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~----~c~~---~~~C~~g~C~~--~~~~C~C~~g~~G~ 54 (60)
..+.|.|++||.|..|+ +|.. .+ |.+ +|++ +.+.|.|++||.+.
T Consensus 24 ~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~-C~~-~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 24 WGYTCTCSPGYEGSNCELAKNECHPERTDG-CQH-FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp SSCCCCCSSSCCSSSSCCCSSSCCTTCTTS-CSS-EEECCSSSCEEECCTTEECC
T ss_pred CCeEEECCCCCcCCccccCcccCCCCCCCC-CcC-ccccCCCeeEEecccccccc
Confidence 35799999999999996 4765 44 877 8987 77999999999874
No 34
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.20 E-value=3.4e-07 Score=44.72 Aligned_cols=47 Identities=26% Similarity=0.682 Sum_probs=34.4
Q ss_pred CCCeeEcCCCCc----CCCCC---CCCCCCCCCCCeEEc--CCCeEEeCCCcccCCCCc
Q psy17083 9 IRASVQCRPGWR----GEFCD---QCKPYPGCKHGYCNG--SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 9 ~~~~C~C~~g~~----g~~C~---~c~~~~~C~~g~C~~--~~~~C~C~~g~~G~~C~~ 58 (60)
..|.|.|++||+ |..|+ +|...+ |. ++|++ +.|.|.|+ ++.|..++.
T Consensus 23 g~y~C~C~~G~~~~~~g~~C~dideC~~~~-C~-~~C~n~~g~y~C~C~-g~~G~~~~~ 78 (87)
T 1z6c_A 23 GDFECECPEGYRYNLKSKSCEDIDECSENM-CA-QLCVNYPGGYTCYCD-GKKGFKLAQ 78 (87)
T ss_dssp TBCCCSSSTTCEEETTTTEEECCCHHHHSC-CS-SEECCCSSSCCEECC-SSSCCBCCT
T ss_pred CCEEEECCCCceECCCCCcCCCcCeeCCCC-CC-CEEEccCCCEEEECC-CCcCCcccC
Confidence 458999999998 67774 355555 76 68886 77999997 666655543
No 35
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.16 E-value=2.7e-07 Score=44.97 Aligned_cols=47 Identities=23% Similarity=0.590 Sum_probs=35.3
Q ss_pred CCCeeEcCCCCc-----CCCCC---CCCCCC-CCCCCeEEc--CCCeEEeCCCcccCC
Q psy17083 9 IRASVQCRPGWR-----GEFCD---QCKPYP-GCKHGYCNG--SSWQCICDTNWGGIL 55 (60)
Q Consensus 9 ~~~~C~C~~g~~-----g~~C~---~c~~~~-~C~~g~C~~--~~~~C~C~~g~~G~~ 55 (60)
..|.|.|++||. |..|+ +|...+ .|.+++|++ +.|.|.|++||.+..
T Consensus 23 g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 23 GDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp TEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCS
T ss_pred CCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCC
Confidence 358999999998 66664 354433 266689987 779999999998754
No 36
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=98.09 E-value=1.5e-06 Score=39.20 Aligned_cols=35 Identities=26% Similarity=0.617 Sum_probs=26.1
Q ss_pred CCCCCCCCCCCC-CeEE--c--CCCeEEeCCCcccCCCCcC
Q psy17083 24 CDQCKPYPGCKH-GYCN--G--SSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 24 C~~c~~~~~C~~-g~C~--~--~~~~C~C~~g~~G~~C~~~ 59 (60)
|..-...| |.+ |+|+ + +.+.|.|++||+|..|+.+
T Consensus 6 C~~~~~~p-C~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 6 CPLSHDGY-CLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CCSTTCCE-ECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred cCCCCCCC-CCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 33333456 886 7997 3 5689999999999999864
No 37
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.06 E-value=5.9e-07 Score=48.93 Aligned_cols=44 Identities=20% Similarity=0.329 Sum_probs=36.1
Q ss_pred CCCeeEcCCCCcCCCCC----CCCCCCCCC-CCeEE----c--CCCeEEeCCCccc
Q psy17083 9 IRASVQCRPGWRGEFCD----QCKPYPGCK-HGYCN----G--SSWQCICDTNWGG 53 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~----~c~~~~~C~-~g~C~----~--~~~~C~C~~g~~G 53 (60)
..|.|.|++||+|..++ +|...| |. +++|+ + +.++|.|++||.|
T Consensus 72 g~y~C~C~~G~~g~~~~C~~d~C~~~~-C~~~g~C~~~~~~~~g~~~C~C~~Gy~g 126 (186)
T 1z1y_A 72 NMYXCGCIEGYTLXEDTCVLDVCQYXN-CGESGECIVEYLSEIQSAGCSCAIGXVP 126 (186)
T ss_dssp CSEEEEECTTEEEETTEEEEGGGTTCC-CCTTEEEEEEEETTEEEEEEEECTEEEE
T ss_pred CCEECCCCCCCccCCCCCCCCcCcCCC-CCCCCEEeeCCcCCCCCceEECCCCCcc
Confidence 46799999999998652 577777 88 57898 4 4689999999998
No 38
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.03 E-value=1.5e-06 Score=53.67 Aligned_cols=50 Identities=34% Similarity=0.706 Sum_probs=15.9
Q ss_pred CCCeeEcCCCCcCCCCCCCCCC------------C-CCCC-C----eEEcCCCeEEeCCCcccCCCCc
Q psy17083 9 IRASVQCRPGWRGEFCDQCKPY------------P-GCKH-G----YCNGSSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~c~~~------------~-~C~~-g----~C~~~~~~C~C~~g~~G~~C~~ 58 (60)
..+.|.|++||+|.+|++|... + .|.+ | .|....++|.|++||.|..|++
T Consensus 458 ~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 458 ETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp TTCCBCBCTTCCSTTTCC--------------------------------------------------
T ss_pred CCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 4578999999999999865321 1 1332 3 3433456899999999999974
No 39
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.03 E-value=9.3e-07 Score=45.32 Aligned_cols=44 Identities=30% Similarity=0.795 Sum_probs=30.7
Q ss_pred CCCeeEcCCCCc---CCCCC---CCCC-CCCCCCCeEEc--CCCeEEeCCCcccC
Q psy17083 9 IRASVQCRPGWR---GEFCD---QCKP-YPGCKHGYCNG--SSWQCICDTNWGGI 54 (60)
Q Consensus 9 ~~~~C~C~~g~~---g~~C~---~c~~-~~~C~~g~C~~--~~~~C~C~~g~~G~ 54 (60)
..+.|.|++||+ |..|+ +|.. .+ | +++|++ +.|+|.|++||.|.
T Consensus 59 ~~y~C~C~~Gy~~~~g~~C~dideC~~~~~-C-~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 59 TQASCECPEGYILDDGFICTDIDECENGGF-C-SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp STTCEECCTTEEEETTTEEEECCHHHHCSS-C-SSEEEECSSSEEEEECSSSSCE
T ss_pred CCeEeECCCCccCCCCCccccccccCCCCC-C-cCeEEeCCCCEEEECCCCCccC
Confidence 357788888888 66663 3544 44 7 677875 66888888888764
No 40
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.02 E-value=1.5e-06 Score=45.53 Aligned_cols=48 Identities=23% Similarity=0.605 Sum_probs=35.9
Q ss_pred CCCeeEcCCCCcCCC------------CC---CCCC--CCCCC-CCeEEc--CCCeEEeCCCcccCCCC
Q psy17083 9 IRASVQCRPGWRGEF------------CD---QCKP--YPGCK-HGYCNG--SSWQCICDTNWGGILCD 57 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~------------C~---~c~~--~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~ 57 (60)
..|.|.|++||.|.. |+ +|.. .+ |. +++|++ +.|+|.|++||.|....
T Consensus 66 g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~-C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 66 GSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQ-CDSSTVCFNTVGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp SCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCC-CCTTSEEEECSSCEEEECCSSSCBCTTC
T ss_pred CCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCC-CCCCCEEECCCCCEEeeCCCCcccCCCC
Confidence 457999999999874 32 2432 44 87 478987 77899999999987653
No 41
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.02 E-value=7.2e-07 Score=44.00 Aligned_cols=42 Identities=19% Similarity=0.290 Sum_probs=31.1
Q ss_pred CCeeEcCCCCcCCCCC--CCCCCCCCCCCeEEcCCCeEEeCCCcccCCCC
Q psy17083 10 RASVQCRPGWRGEFCD--QCKPYPGCKHGYCNGSSWQCICDTNWGGILCD 57 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~--~c~~~~~C~~g~C~~~~~~C~C~~g~~G~~C~ 57 (60)
+|.|.|.+||+|..|+ +|...| |.++. ..+.|.|++||. .|+
T Consensus 1 sy~C~C~~g~~g~~c~~~~c~~~p-C~n~~---~~y~C~C~~G~~--~C~ 44 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQHQSWLRP-VLRSN---RVEYCWCNSGRA--QCH 44 (91)
T ss_dssp CCCCCCBCSSSCCBCCSSCEEEEE-CSSSS---CEEEEECSSSCC--BCC
T ss_pred CeeeECCCCCcCCeECCCcccCCc-cccCC---CCcEeECCCCCc--ccc
Confidence 4789999999999885 244444 55431 458999999997 675
No 42
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.01 E-value=1.9e-08 Score=58.23 Aligned_cols=52 Identities=12% Similarity=0.163 Sum_probs=38.4
Q ss_pred CCCeeEcCCCCcCCCCCC----------CCCCC----------------------CCC-CCeEEc--CCCeEEeCCCccc
Q psy17083 9 IRASVQCRPGWRGEFCDQ----------CKPYP----------------------GCK-HGYCNG--SSWQCICDTNWGG 53 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~----------c~~~~----------------------~C~-~g~C~~--~~~~C~C~~g~~G 53 (60)
..|.|.|++||+|.+|+. +...| .|. .|+|++ ..|+|.|++||+|
T Consensus 51 ~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G 130 (267)
T 4fbr_A 51 MTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKS 130 (267)
T ss_dssp EEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred CCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCccEEeeCCCCccc
Confidence 468999999999999963 33322 144 256665 6689999999999
Q ss_pred CCCCcCC
Q psy17083 54 ILCDQGH 60 (60)
Q Consensus 54 ~~C~~~~ 60 (60)
..|+.+|
T Consensus 131 ~~Ce~~~ 137 (267)
T 4fbr_A 131 EVTDGDT 137 (267)
T ss_dssp EECCCCE
T ss_pred cCCCCCc
Confidence 9998753
No 43
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.00 E-value=7e-07 Score=41.42 Aligned_cols=32 Identities=25% Similarity=0.738 Sum_probs=26.2
Q ss_pred CCCCCCCCCC---CeEEc--CCCeEEeCCCcc-cCCCCc
Q psy17083 26 QCKPYPGCKH---GYCNG--SSWQCICDTNWG-GILCDQ 58 (60)
Q Consensus 26 ~c~~~~~C~~---g~C~~--~~~~C~C~~g~~-G~~C~~ 58 (60)
+|...| |.+ |+|++ +.|.|.|++||. |..|+.
T Consensus 13 ~C~snP-C~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 13 ACSSNP-CGPEAAGTCKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp HHHHCS-SCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred cCcCCC-CcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence 466677 985 59987 668999999999 999975
No 44
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.98 E-value=1.4e-06 Score=44.58 Aligned_cols=46 Identities=20% Similarity=0.579 Sum_probs=33.1
Q ss_pred CCCeeEcCCCCcCCCCC--CCC----CCCCCCCCeEEc-CCCeEEeCCCcc---cCCC
Q psy17083 9 IRASVQCRPGWRGEFCD--QCK----PYPGCKHGYCNG-SSWQCICDTNWG---GILC 56 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~--~c~----~~~~C~~g~C~~-~~~~C~C~~g~~---G~~C 56 (60)
..|+|.|++||.|..++ +|. ..+ |. ++|++ +.+.|.|++||. |..|
T Consensus 22 g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~-C~-~~C~~~~~y~C~C~~Gy~~~~g~~C 77 (118)
T 1dx5_I 22 TSYLCVCAEGFAPIPHEPHRCQMFCNQTA-CP-ADCDPNTQASCECPEGYILDDGFIC 77 (118)
T ss_dssp SCEEEECCTTEEEETTEEEEEEECCCSSE-EE-CEECTTSTTCEECCTTEEEETTTEE
T ss_pred CCEEeECCCCccccCCCCCccccccCCCC-CC-CcccCCCCeEeECCCCccCCCCCcc
Confidence 46899999999998543 232 222 33 56665 678999999999 7777
No 45
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=97.91 E-value=9.3e-06 Score=47.29 Aligned_cols=53 Identities=28% Similarity=0.598 Sum_probs=39.1
Q ss_pred CCCCccCCCeeEcCCCCcCCCCC-------------CCCCC---CCCC-CCeEEcCCCeEEeCCCc------ccCCCC
Q psy17083 3 NRLGRNIRASVQCRPGWRGEFCD-------------QCKPY---PGCK-HGYCNGSSWQCICDTNW------GGILCD 57 (60)
Q Consensus 3 ~~~g~~~~~~C~C~~g~~g~~C~-------------~c~~~---~~C~-~g~C~~~~~~C~C~~g~------~G~~C~ 57 (60)
++||...-+.|.|.+||+|..|+ .|... +.|. +|.|+- ++|.|...| .|.+|+
T Consensus 199 ~g~G~~~CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C--G~C~C~~~~~~~~~~~G~~~~ 274 (280)
T 2p26_A 199 HGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--GQCLCHTSDVPGKLIYGQYCE 274 (280)
T ss_dssp GGSEEEETTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET--TEEEECCCSSTTCEEESTTSC
T ss_pred CCCCeECCCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC--CeeECcCCCCCCeeEeeEecc
Confidence 45677778899999999999996 24321 2366 588885 899997775 677775
No 46
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=97.91 E-value=2.2e-06 Score=46.66 Aligned_cols=47 Identities=19% Similarity=0.524 Sum_probs=37.1
Q ss_pred CCeeEcCCCCcC-----CCCC-----CCCCCCCC-C-CCeEEc--CCCeEEeCCCcccCCCCc
Q psy17083 10 RASVQCRPGWRG-----EFCD-----QCKPYPGC-K-HGYCNG--SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 10 ~~~C~C~~g~~g-----~~C~-----~c~~~~~C-~-~g~C~~--~~~~C~C~~g~~G~~C~~ 58 (60)
.+.|.|++||.| ..|+ +|. .+ | . +++|++ +.|+|.|++||.|..++.
T Consensus 115 ~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~-~~-C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 115 SAGCSCAIGXVPNPEDEXXCTXTGETACQ-LX-CNTDNEVCXNVEGVYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp EEEEEECTEEEEETTTTTEEEEEECCCCC-CC-CCTTTEEEEEETTEEEEEECTTCEEETTTT
T ss_pred CceEECCCCCcccCCCCCcceEcCCCccc-cc-ccccCcceecCCCCeeeECCCCCccCcccc
Confidence 579999999998 6664 354 34 8 6 578986 678999999999988764
No 47
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.86 E-value=2.4e-06 Score=43.29 Aligned_cols=45 Identities=20% Similarity=0.609 Sum_probs=14.0
Q ss_pred CCCeeEcCCCCcC---CCCC---CCCC-CCCCCCCeEEc--CCCeEEeCCCcccCC
Q psy17083 9 IRASVQCRPGWRG---EFCD---QCKP-YPGCKHGYCNG--SSWQCICDTNWGGIL 55 (60)
Q Consensus 9 ~~~~C~C~~g~~g---~~C~---~c~~-~~~C~~g~C~~--~~~~C~C~~g~~G~~ 55 (60)
..|.|.|++||.| ..|+ +|.. .+ |. ++|++ +.|.|.|++||.+..
T Consensus 48 g~y~C~C~~Gy~g~~g~~C~dideC~~~~~-C~-~~C~n~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 48 IGYECLCPDGFQLVAQRRCEDIDECQDPDT-CS-QLCVNLEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp BSCEEECCTTCEEETTTEEEC-----------------------------------
T ss_pred CCeEEECCCCccccCCCccccccccCCCCC-cC-CeeecCCCCEEEECCCCceECC
Confidence 4689999999998 6664 4543 33 65 67876 779999999998653
No 48
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.81 E-value=1.7e-05 Score=50.46 Aligned_cols=48 Identities=25% Similarity=0.642 Sum_probs=37.9
Q ss_pred CCee-EcCCCCcC--CCCC---CCCCCC-CCCC-C---eEEc--CCCeEE-eCCCcccCCCC
Q psy17083 10 RASV-QCRPGWRG--EFCD---QCKPYP-GCKH-G---YCNG--SSWQCI-CDTNWGGILCD 57 (60)
Q Consensus 10 ~~~C-~C~~g~~g--~~C~---~c~~~~-~C~~-g---~C~~--~~~~C~-C~~g~~G~~C~ 57 (60)
+|+| .|++||+| ..|+ +|...| .|.+ + +|++ +.|+|. |++||.|..|+
T Consensus 24 sy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~ 85 (634)
T 1yo8_A 24 SWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPV 85 (634)
T ss_dssp CEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCE
T ss_pred CeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccc
Confidence 3799 99999998 7886 576544 2874 5 7986 678998 99999998764
No 49
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.81 E-value=2.3e-05 Score=43.44 Aligned_cols=29 Identities=31% Similarity=0.887 Sum_probs=24.5
Q ss_pred CCCCCC-CeEEcCCCeEEeCCCcccCCCCcC
Q psy17083 30 YPGCKH-GYCNGSSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 30 ~~~C~~-g~C~~~~~~C~C~~g~~G~~C~~~ 59 (60)
.+.|.+ |.|+ .+.+|.|++||.|..|++.
T Consensus 152 ~~~C~ngG~Cv-~P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 152 PGGCRNGGFCN-ERRICECPDGFHGPHCEGT 181 (188)
T ss_dssp TTCCCTTCEEC-TTSCEECCTTCBTTTTCBC
T ss_pred CCCCCCCCEeC-CCCcccCcCCCCCCCCcCC
Confidence 345884 7999 7899999999999999863
No 50
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.80 E-value=5.1e-06 Score=44.71 Aligned_cols=50 Identities=30% Similarity=0.642 Sum_probs=37.0
Q ss_pred CCCeeE-cCCCCcCCCCCCCCCC---------------C-CCC-CC------eEEcCCCeEEeCCCcccCCCCc
Q psy17083 9 IRASVQ-CRPGWRGEFCDQCKPY---------------P-GCK-HG------YCNGSSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 9 ~~~~C~-C~~g~~g~~C~~c~~~---------------~-~C~-~g------~C~~~~~~C~C~~g~~G~~C~~ 58 (60)
.+++|. |.++|+|.+|+.|... + .|. .| +|....++|.|+++|+|..|++
T Consensus 73 ~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~ 146 (162)
T 1klo_A 73 LTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGT 146 (162)
T ss_dssp TTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCE
T ss_pred CCCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCCC
Confidence 568995 9999999999876431 1 132 12 5665578999999999999974
No 51
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.76 E-value=3.2e-06 Score=44.53 Aligned_cols=45 Identities=29% Similarity=0.801 Sum_probs=34.6
Q ss_pred CeeEcCCCCc---CCCCC---CCCCCC-CCCCCeEEc--CCCeEEeCCCcccCC
Q psy17083 11 ASVQCRPGWR---GEFCD---QCKPYP-GCKHGYCNG--SSWQCICDTNWGGIL 55 (60)
Q Consensus 11 ~~C~C~~g~~---g~~C~---~c~~~~-~C~~g~C~~--~~~~C~C~~g~~G~~ 55 (60)
+.|.|++||. |..|+ +|...| .|.+++|++ +.|+|.|++||.|..
T Consensus 88 ~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CCTTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCT
T ss_pred CcccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCC
Confidence 6778999995 88885 354322 288789987 779999999998764
No 52
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.74 E-value=5.1e-06 Score=50.90 Aligned_cols=45 Identities=27% Similarity=0.801 Sum_probs=35.8
Q ss_pred eeEcCCCCcCCCCCC--CCCCCCCCCCeEEcCCCeEEeCCCcccCCCCcC
Q psy17083 12 SVQCRPGWRGEFCDQ--CKPYPGCKHGYCNGSSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 12 ~C~C~~g~~g~~C~~--c~~~~~C~~g~C~~~~~~C~C~~g~~G~~C~~~ 59 (60)
...|..+|.|..|+. |.. + |.+|+|+ ..+.|.|++||+|..|+.+
T Consensus 378 p~~C~~~~~g~~c~~~~C~~-~-C~nG~C~-~~~~C~C~~G~~G~~C~~~ 424 (463)
T 2wg3_C 378 PEECRATVQPAQTLTSECSR-L-CRNGYCT-PTGKCCCSPGWEGDFCRTA 424 (463)
T ss_dssp CGGGCCCCCCCCCCCCHHHH-H-CCSEEEC-TTSCEEECTTEESTTSCEE
T ss_pred cccCCCCCcCCCCccccccC-C-CCCCccC-CCCeECCCCCcCCCcCCcC
Confidence 357888999998863 543 4 8889999 4679999999999999753
No 53
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=97.71 E-value=6.7e-08 Score=55.96 Aligned_cols=52 Identities=13% Similarity=0.157 Sum_probs=37.6
Q ss_pred CCCeeEcCCCCcCCCCCC----------CCCCC----------------------CCC-CCeEEc--CCCeEEeCCCccc
Q psy17083 9 IRASVQCRPGWRGEFCDQ----------CKPYP----------------------GCK-HGYCNG--SSWQCICDTNWGG 53 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~----------c~~~~----------------------~C~-~g~C~~--~~~~C~C~~g~~G 53 (60)
..|+|.|++||+|.+|+. +...| .|. +|+|++ ..|+|.|++||+|
T Consensus 118 ~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G 197 (267)
T 4fbr_A 118 TTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRG 197 (267)
T ss_dssp EEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred ccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCccc
Confidence 458899999999998862 22212 133 356765 5688999999999
Q ss_pred CCCCcCC
Q psy17083 54 ILCDQGH 60 (60)
Q Consensus 54 ~~C~~~~ 60 (60)
.+|+.+|
T Consensus 198 ~~c~~~i 204 (267)
T 4fbr_A 198 TLTSPDT 204 (267)
T ss_dssp EEEETTE
T ss_pred ccccccc
Confidence 9987654
No 54
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.66 E-value=2.4e-05 Score=49.82 Aligned_cols=49 Identities=29% Similarity=0.730 Sum_probs=36.9
Q ss_pred CCCeeE-cCCCCcCCCCC------------------CCCC--CCCCC-CCeEEc------CCCeEEeCCCccc--CCCCc
Q psy17083 9 IRASVQ-CRPGWRGEFCD------------------QCKP--YPGCK-HGYCNG------SSWQCICDTNWGG--ILCDQ 58 (60)
Q Consensus 9 ~~~~C~-C~~g~~g~~C~------------------~c~~--~~~C~-~g~C~~------~~~~C~C~~g~~G--~~C~~ 58 (60)
..|+|. |++||+|..|+ +|.. .+ |. +++|+. +.|+|.|++||.| ..|++
T Consensus 68 gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~p-C~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~ 146 (634)
T 1yo8_A 68 PGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHN-CHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGE 146 (634)
T ss_dssp SSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCC-CCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEE
T ss_pred CceecccCCCCcccCccccccccccccCCCcccccccccCCCcc-cccCccccccccccccceeeeccCCccccCccccc
Confidence 457898 99999988753 3554 24 87 468975 3689999999998 77863
No 55
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.58 E-value=1.8e-05 Score=46.98 Aligned_cols=47 Identities=28% Similarity=0.870 Sum_probs=17.1
Q ss_pred CCeeEcCCCCc----CCCCC---CCCCCCCCCCCeEEc--CCCeEEeCCCcc----cCCCC
Q psy17083 10 RASVQCRPGWR----GEFCD---QCKPYPGCKHGYCNG--SSWQCICDTNWG----GILCD 57 (60)
Q Consensus 10 ~~~C~C~~g~~----g~~C~---~c~~~~~C~~g~C~~--~~~~C~C~~g~~----G~~C~ 57 (60)
.+.|.|++||. |..|+ +|.....|.++ |++ +.|.|.|++||. |..|.
T Consensus 23 ~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~-C~~~~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 23 AVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG-CTNSEGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp -----------------------------CCTTE-EC-----CCEECCTTEEECTTSSCEE
T ss_pred CcEeECCCCceECCCCCccCccceeCCcCcccCc-CCCCCCCCeEEECCCceEcCCCCeEC
Confidence 47999999998 88885 46522227654 876 779999999997 66664
No 56
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.50 E-value=4e-05 Score=40.25 Aligned_cols=32 Identities=34% Similarity=0.976 Sum_probs=26.8
Q ss_pred CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCc
Q psy17083 26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~ 58 (60)
+|...| |.+ |+|++ +.|.|.|++||.|..|+.
T Consensus 49 ~C~~~p-C~n~g~C~~~~g~y~C~C~~G~~G~~C~~ 83 (142)
T 2c4f_L 49 QCASSP-CQNGGSCKDQLQSYICFCLPAFEGRNCET 83 (142)
T ss_dssp GGGGCC-CCTTCEEEEETTEEEEECCTTEESTTSCE
T ss_pred cCcCCC-cCCCCEEeCCCCCEEeeCCCCccCCcccc
Confidence 466677 985 79987 678999999999999975
No 57
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.47 E-value=5.2e-05 Score=45.24 Aligned_cols=45 Identities=20% Similarity=0.651 Sum_probs=33.7
Q ss_pred CCCeeEcCCCCc---CCCCC---CCCCCCCCCCCeEEc--CCCeEEeCCCcccC
Q psy17083 9 IRASVQCRPGWR---GEFCD---QCKPYPGCKHGYCNG--SSWQCICDTNWGGI 54 (60)
Q Consensus 9 ~~~~C~C~~g~~---g~~C~---~c~~~~~C~~g~C~~--~~~~C~C~~g~~G~ 54 (60)
..|.|.|++||. |..|+ +|.....|.+ .|++ +.|.|.|.+||.+.
T Consensus 19 ~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~-~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 19 IGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ-LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp SSEEEECCTTEEECSSSCEEECCCCSTTSSCSS-CCBCCSSSCBCCCCTTCCCC
T ss_pred CCeEEECCCCCCcCCCCcccCchhhhccCCCCC-ccCCCccceeeecccccccc
Confidence 468999999998 77784 4653223654 6776 77999999999754
No 58
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=97.47 E-value=9.4e-05 Score=35.83 Aligned_cols=27 Identities=33% Similarity=0.771 Sum_probs=22.8
Q ss_pred CCCCeEEc----CCCeEEeCCCcccCCCCcC
Q psy17083 33 CKHGYCNG----SSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 33 C~~g~C~~----~~~~C~C~~g~~G~~C~~~ 59 (60)
|.||+|.. ..+.|.|++||+|..|+..
T Consensus 48 ClnG~C~~i~~~~~~~C~C~~GYtG~RCE~l 78 (79)
T 1xdt_R 48 CIHGECKYVKELRAPSCICHPGYHGERCHGL 78 (79)
T ss_dssp CSSEEECCBGGGTBCCEEECTTEESTTCCEE
T ss_pred CCCCEeeeecCCCCeEEEcCCCccccccccc
Confidence 89999952 4578999999999999864
No 59
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=97.46 E-value=5e-05 Score=40.18 Aligned_cols=32 Identities=25% Similarity=0.742 Sum_probs=25.8
Q ss_pred CCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083 27 CKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 27 c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~ 59 (60)
|...| |. +|+|.+ +.++|.|++||.|..|+.+
T Consensus 122 c~~~~-C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 122 CQDMS-CSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp CCTTG-GGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CcCCC-CCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 44455 77 478987 6789999999999999864
No 60
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=97.45 E-value=2.1e-05 Score=50.73 Aligned_cols=44 Identities=30% Similarity=0.743 Sum_probs=32.8
Q ss_pred eEcCCCCcCCCCC-CCCCCCCCC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083 13 VQCRPGWRGEFCD-QCKPYPGCK-HGYCNGSSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 13 C~C~~g~~g~~C~-~c~~~~~C~-~g~C~~~~~~C~C~~g~~G~~C~~ 58 (60)
..|.++|.|..|. .-.+...|. ||+|+. ++|+|.+||.|..|++
T Consensus 520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~--G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQ--GSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CCTTCCEEEEEEEEESCSSGGGGGSEEEET--TEEEECTTEESTTSCE
T ss_pred CccCCCcccccccccCCCCcccCCCcEECC--CCEeeCCCccCCCcCc
Confidence 3678999998886 222222376 789995 7899999999998864
No 61
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=97.40 E-value=0.00014 Score=32.31 Aligned_cols=26 Identities=31% Similarity=0.885 Sum_probs=22.2
Q ss_pred CCCCeEEc----CCCeEEeCCCcccCCCCc
Q psy17083 33 CKHGYCNG----SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 33 C~~g~C~~----~~~~C~C~~g~~G~~C~~ 58 (60)
|.||+|.. ....|.|++||+|..|+.
T Consensus 16 C~nG~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 16 CFHGTCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred ccCCEEeeccCCCCeEEECCCCCcccCCCc
Confidence 88888873 567999999999999974
No 62
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.39 E-value=6.8e-05 Score=40.29 Aligned_cols=48 Identities=33% Similarity=0.839 Sum_probs=34.4
Q ss_pred Cee-EcCCCCcCCCCCCCCCC----C-------------CCC-C------CeEEcCCCeEE-eCCCcccCCCCc
Q psy17083 11 ASV-QCRPGWRGEFCDQCKPY----P-------------GCK-H------GYCNGSSWQCI-CDTNWGGILCDQ 58 (60)
Q Consensus 11 ~~C-~C~~g~~g~~C~~c~~~----~-------------~C~-~------g~C~~~~~~C~-C~~g~~G~~C~~ 58 (60)
++| .|+++|+|.+|+.|... | .|. + +.|....++|. |+++|.|..|++
T Consensus 18 ~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce~ 91 (162)
T 1klo_A 18 VVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDR 91 (162)
T ss_dssp EEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTCE
T ss_pred EEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcCc
Confidence 689 69999999999976431 1 122 1 35655568894 999999998864
No 63
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.38 E-value=0.00017 Score=38.11 Aligned_cols=32 Identities=38% Similarity=1.114 Sum_probs=26.6
Q ss_pred CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCc
Q psy17083 26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~ 58 (60)
+|...| |.+ |+|++ +.|.|.|++||.|..|+.
T Consensus 50 eC~~~p-C~n~g~C~~~~~~y~C~C~~G~~G~~C~~ 84 (146)
T 1x7a_L 50 QCEPNP-CLNGGLCKDDINSYECWCQVGFEGKNCEL 84 (146)
T ss_dssp CCSSCS-SCTTCEEEECSSCEEEECCSSEESTTTCE
T ss_pred cCCCCC-CCCCCEeECCCCCEEEecCCCCcCCcCCC
Confidence 477777 985 79986 678999999999999863
No 64
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.34 E-value=9.8e-05 Score=42.75 Aligned_cols=34 Identities=29% Similarity=0.894 Sum_probs=27.4
Q ss_pred CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCcCC
Q psy17083 26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQGH 60 (60)
Q Consensus 26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~~~ 60 (60)
+|...| |.+ |+|.+ +.+.|.|++||.|..|+.||
T Consensus 7 ~C~~~p-C~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~ 43 (317)
T 3h5c_B 7 PCISQP-CLHNGSCQDSIWGYTCTCSPGYEGSNCELAK 43 (317)
T ss_dssp CTTSCC-CTTTCCCCCCSSSCCCCCSSSCCSSSSCCCS
T ss_pred cCCCCC-CCCCCEeECCCCCeEEECCCCCcCCccccCc
Confidence 466677 885 78886 66899999999999998553
No 65
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.30 E-value=3.5e-05 Score=42.81 Aligned_cols=33 Identities=30% Similarity=0.882 Sum_probs=0.0
Q ss_pred CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083 26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~~ 59 (60)
+|...| |.+ |+|++ +.|.|.|++||.|..|+.+
T Consensus 44 eC~~~p-C~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~ 79 (195)
T 1nfu_B 44 QCETSP-CQNQGKCKDGLGEYTCTCLEGFEGKNCELF 79 (195)
T ss_dssp -------------------------------------
T ss_pred ccCCCC-CCCCCEeECCCCCeeEeCCCCceecccccc
Confidence 577777 985 78986 6789999999999999753
No 66
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=97.30 E-value=7.9e-05 Score=39.11 Aligned_cols=33 Identities=33% Similarity=0.938 Sum_probs=26.7
Q ss_pred CCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcCC
Q psy17083 27 CKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQGH 60 (60)
Q Consensus 27 c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~~ 60 (60)
|...| |. +|.|.+ ..+.|.|.++|.|..|+++|
T Consensus 122 ~~~~p-c~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~~ 157 (157)
T 1g1t_A 122 CTNTS-CSGHGECVETINNYTCKCDPGFSGLKCEQIV 157 (157)
T ss_dssp CCTTG-GGGSEEEEEETTEEEEEECTTEESTTSCEEC
T ss_pred CCCCC-CCCCCEeecCCCCeeEECCCCccCccccccC
Confidence 44445 76 478987 67899999999999999876
No 67
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=97.27 E-value=0.00014 Score=33.12 Aligned_cols=26 Identities=23% Similarity=0.723 Sum_probs=21.1
Q ss_pred CCC-CeEEc------CCCeEEeCCCcccCCCCc
Q psy17083 33 CKH-GYCNG------SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 33 C~~-g~C~~------~~~~C~C~~g~~G~~C~~ 58 (60)
|.| |+|.. ..+.|.|++||+|..|+.
T Consensus 16 C~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp SCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred CCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 885 68972 346899999999999975
No 68
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.25 E-value=0.00026 Score=35.81 Aligned_cols=26 Identities=38% Similarity=1.138 Sum_probs=21.7
Q ss_pred CC-CCeEEc--CCCeEEeCCCcccCCCCc
Q psy17083 33 CK-HGYCNG--SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 33 C~-~g~C~~--~~~~C~C~~g~~G~~C~~ 58 (60)
|. +|+|++ +.|+|.|++||.|..|+.
T Consensus 22 C~~~g~C~~~~~~y~C~C~~G~~G~~C~~ 50 (114)
T 1aut_L 22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQR 50 (114)
T ss_dssp TTTSEEECCCSSCCCEEECTTEESTTSCE
T ss_pred CCCcCCCCCCCCCcEeeCCCCCcCCCcCc
Confidence 54 578986 678999999999999874
No 69
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=97.20 E-value=0.00012 Score=32.48 Aligned_cols=27 Identities=30% Similarity=0.802 Sum_probs=22.0
Q ss_pred CCCCeEEc----CCCeEEeCCCcccCCCCcC
Q psy17083 33 CKHGYCNG----SSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 33 C~~g~C~~----~~~~C~C~~g~~G~~C~~~ 59 (60)
|.||+|.- ....|+|++||+|..|+..
T Consensus 16 C~nG~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 16 CIKGRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp CTTCCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred ccCCEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 88888852 4568999999999999853
No 70
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.18 E-value=5.6e-05 Score=39.38 Aligned_cols=32 Identities=31% Similarity=0.964 Sum_probs=0.0
Q ss_pred CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCc
Q psy17083 26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~ 58 (60)
.|...| |.+ |+|++ +.|.|.|++||.|..|+.
T Consensus 44 ~C~~~p-C~n~g~C~~~~~~y~C~C~~G~~G~~C~~ 78 (134)
T 2vh0_B 44 QCETSP-CQNQGKCKDGLGEYTCTCLEGFEGKNCEL 78 (134)
T ss_dssp ------------------------------------
T ss_pred cCCCCC-CCCcCCcccCCCCEEeeCCCCccCCcccc
Confidence 466677 885 78986 678999999999999975
No 71
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.12 E-value=0.00031 Score=33.66 Aligned_cols=30 Identities=40% Similarity=0.934 Sum_probs=23.7
Q ss_pred CCCC-CCCCCCCeEEc--CCCeEEeCCCcc--cCCC
Q psy17083 26 QCKP-YPGCKHGYCNG--SSWQCICDTNWG--GILC 56 (60)
Q Consensus 26 ~c~~-~~~C~~g~C~~--~~~~C~C~~g~~--G~~C 56 (60)
+|.. .+ |.+++|++ +.|.|.|++||. |..|
T Consensus 7 eC~~~~~-C~~g~C~n~~g~y~C~C~~Gy~~~g~~C 41 (82)
T 1emn_A 7 ECKEPDV-CKHGQCINTDGSYRCECPFGYILAGNEC 41 (82)
T ss_dssp SSSSTTS-CSSSEECCCSSCCCEECCTTEEEETTEE
T ss_pred cCCCCCC-cCCCEEEecCCCEEEECCCCeECCCCcc
Confidence 4554 45 88889987 779999999997 7776
No 72
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.11 E-value=0.00012 Score=44.83 Aligned_cols=18 Identities=22% Similarity=0.711 Sum_probs=15.3
Q ss_pred CCeeEcCCCCcCCCCCCC
Q psy17083 10 RASVQCRPGWRGEFCDQC 27 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~~c 27 (60)
.+.|.|+.++.|+.|+.|
T Consensus 312 ~~~C~C~~~ttG~~CE~C 329 (426)
T 3zyj_B 312 KLTCECEHNTTGPDCGKC 329 (426)
T ss_dssp EEEECCCTTEESSSSCEE
T ss_pred CceeeCCCCCcCCCcccc
Confidence 368999999999999865
No 73
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.10 E-value=3e-05 Score=41.32 Aligned_cols=23 Identities=35% Similarity=0.681 Sum_probs=19.8
Q ss_pred CCCCeEEc--CCCeEEeCCCcccCC
Q psy17083 33 CKHGYCNG--SSWQCICDTNWGGIL 55 (60)
Q Consensus 33 C~~g~C~~--~~~~C~C~~g~~G~~ 55 (60)
|.+++|++ ++|+|.|++||.|..
T Consensus 132 C~~g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 132 CQGGKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp GBTSEEEECSSCEEEECCTTCCBCT
T ss_pred cCCCEeEcCCCCEEeeCCCCccCCC
Confidence 77789987 789999999998865
No 74
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=97.09 E-value=0.00034 Score=44.33 Aligned_cols=33 Identities=30% Similarity=0.825 Sum_probs=27.6
Q ss_pred CCCCCCCCCC-CeEEc---CCCeEEeC-CCcccCCCCcC
Q psy17083 26 QCKPYPGCKH-GYCNG---SSWQCICD-TNWGGILCDQG 59 (60)
Q Consensus 26 ~c~~~~~C~~-g~C~~---~~~~C~C~-~g~~G~~C~~~ 59 (60)
.|...| |.| |+|++ +.|.|.|+ +||+|..|+..
T Consensus 3 ~C~s~P-C~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 3 PCCSNP-CQNRGECMSTGFDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp TTTTCC-CCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCC-CCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence 477788 996 69984 57899999 99999999863
No 75
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=97.08 E-value=0.00043 Score=30.73 Aligned_cols=26 Identities=31% Similarity=0.806 Sum_probs=22.0
Q ss_pred CCCCeEEc----CCCeEEeCCCcccCCCCc
Q psy17083 33 CKHGYCNG----SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 33 C~~g~C~~----~~~~C~C~~g~~G~~C~~ 58 (60)
|.||+|.- ....|+|+.+|+|..|+.
T Consensus 20 C~nG~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 20 CIHGECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp CSSSEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CCCCEEEEecCCCCeeEECCCCcccccccc
Confidence 88899972 456899999999999985
No 76
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.04 E-value=0.00026 Score=30.78 Aligned_cols=17 Identities=24% Similarity=0.751 Sum_probs=15.2
Q ss_pred CCeeEcCCCCcCCCCCC
Q psy17083 10 RASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~~ 26 (60)
.+.|.|++||+|.+|+.
T Consensus 27 ~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 27 QNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EEEEEECTTCSSTTSCC
T ss_pred CEEEECCCCCccCCCCc
Confidence 57899999999999974
No 77
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.97 E-value=0.00034 Score=43.97 Aligned_cols=33 Identities=39% Similarity=0.976 Sum_probs=27.4
Q ss_pred CCCCCCCCCC-CeEEc---CCCeEEeC-CCcccCCCCcC
Q psy17083 26 QCKPYPGCKH-GYCNG---SSWQCICD-TNWGGILCDQG 59 (60)
Q Consensus 26 ~c~~~~~C~~-g~C~~---~~~~C~C~-~g~~G~~C~~~ 59 (60)
+|...| |+| |+|.+ +.|.|.|+ +||.|..|+..
T Consensus 4 ~C~~~P-C~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 4 PCCYYP-CQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp GGGGCC-CCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred cCCCCC-CCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 467788 995 79986 46899999 99999999864
No 78
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=96.96 E-value=0.00031 Score=31.74 Aligned_cols=18 Identities=22% Similarity=0.586 Sum_probs=16.0
Q ss_pred CCCeeEcCCCCcCCCCCC
Q psy17083 9 IRASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~ 26 (60)
..|.|.|++||+|.+|+.
T Consensus 32 ~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 32 SRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp CCEEEEECTTEESTTSCE
T ss_pred CCEeEeCCCCCcCCCcCc
Confidence 468999999999999974
No 79
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=96.95 E-value=0.00065 Score=37.64 Aligned_cols=24 Identities=29% Similarity=0.620 Sum_probs=19.8
Q ss_pred CCCCc-cCCCeeEcCCCCcCCCCCC
Q psy17083 3 NRLGR-NIRASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 3 ~~~g~-~~~~~C~C~~g~~g~~C~~ 26 (60)
.++|. ..++.|.|++||+|.+|+.
T Consensus 156 ~ngG~Cv~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 156 RNGGFCNERRICECPDGFHGPHCEG 180 (188)
T ss_dssp CTTCEECTTSCEECCTTCBTTTTCB
T ss_pred CCCCEeCCCCcccCcCCCCCCCCcC
Confidence 45566 5689999999999999975
No 80
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.85 E-value=0.00057 Score=35.75 Aligned_cols=30 Identities=30% Similarity=0.740 Sum_probs=21.9
Q ss_pred CCCCCCCCCCCCeEEc--CCCeEEeCCCcccCC
Q psy17083 25 DQCKPYPGCKHGYCNG--SSWQCICDTNWGGIL 55 (60)
Q Consensus 25 ~~c~~~~~C~~g~C~~--~~~~C~C~~g~~G~~ 55 (60)
++|...| |.+|+|++ +.|+|.|++||.|..
T Consensus 5 deC~~~p-C~ng~C~n~~g~y~C~C~~G~~g~~ 36 (147)
T 2w86_A 5 DECESSP-CINGVCKNSPGSFICECSSESTLDP 36 (147)
T ss_dssp CGGGGCC-SBTSEEEEETTEEEEECCTTEEECT
T ss_pred ccCcCCC-CCCCEeECCCCCEEeECCCCcccCC
Confidence 3455566 87778876 668888888888754
No 81
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.84 E-value=0.00052 Score=29.45 Aligned_cols=18 Identities=22% Similarity=0.591 Sum_probs=15.6
Q ss_pred CCCeeEcCCCCcCCCCCC
Q psy17083 9 IRASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~ 26 (60)
..+.|.|++||+|.+|+.
T Consensus 24 ~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 24 DSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp SSEEEECCTTEETTTTCE
T ss_pred CCEEEEcCCCCcCCcCCc
Confidence 468999999999999963
No 82
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=96.80 E-value=0.00061 Score=28.18 Aligned_cols=17 Identities=24% Similarity=0.561 Sum_probs=14.9
Q ss_pred CCCeeEcCCCCcCCCCC
Q psy17083 9 IRASVQCRPGWRGEFCD 25 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~ 25 (60)
..+.|.|++||+|.+|+
T Consensus 22 ~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 22 NSYECWCPFGFEGKNCE 38 (39)
T ss_dssp TEEEEECCTTCCSTTSC
T ss_pred CceEeECCCCCcCCccC
Confidence 35789999999999986
No 83
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=96.72 E-value=0.0012 Score=34.86 Aligned_cols=27 Identities=33% Similarity=0.866 Sum_probs=23.2
Q ss_pred CC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083 33 CK-HGYCNG--SSWQCICDTNWGGILCDQG 59 (60)
Q Consensus 33 C~-~g~C~~--~~~~C~C~~g~~G~~C~~~ 59 (60)
|. +|+|.. ..+.|.|.+||.|..|+.+
T Consensus 127 C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 127 CSGHGECVEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp SCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred CCCCCeecccCCCceeeeCCCccccccccc
Confidence 76 688985 6789999999999999865
No 84
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.63 E-value=0.0018 Score=33.32 Aligned_cols=42 Identities=21% Similarity=0.430 Sum_probs=24.0
Q ss_pred eeEcCCCCcCCCCCCCCCCC-CCCCCeEEcCCCeEEeCCCcccCCCC
Q psy17083 12 SVQCRPGWRGEFCDQCKPYP-GCKHGYCNGSSWQCICDTNWGGILCD 57 (60)
Q Consensus 12 ~C~C~~g~~g~~C~~c~~~~-~C~~g~C~~~~~~C~C~~g~~G~~C~ 57 (60)
.|.|+++|+|.+|+. ... .|..+. ...|++.+...++|..|+
T Consensus 20 ~C~Cp~g~~G~~Ce~--~~~~~C~~g~--G~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 20 WCNCPKKFGGQHCEI--DKSKTCYEGN--GHFYRGKASTDTMGRPCL 62 (122)
T ss_dssp EEECCTTEESTTSCE--ESSCCSBCSS--CTTCCSCCCBBTTSCBBC
T ss_pred CccCCCCCCCccccc--cCcCCCcccc--cccceeeccccccCCccc
Confidence 678888888877753 112 122211 034666776677777664
No 85
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=96.53 E-value=0.0015 Score=28.93 Aligned_cols=18 Identities=22% Similarity=0.591 Sum_probs=15.6
Q ss_pred CCCeeEcCCCCcCCCCCC
Q psy17083 9 IRASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~ 26 (60)
..+.|.|++||+|.+|+.
T Consensus 27 ~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 27 DSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp SCEEEECCTTCCSSSSCC
T ss_pred CCEEEECCCCCcCCcCCc
Confidence 357899999999999974
No 86
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.44 E-value=0.0017 Score=32.60 Aligned_cols=42 Identities=19% Similarity=0.516 Sum_probs=27.0
Q ss_pred cCCCCcCCCCC--CCCCCC-CCCCCeEEc--CCCeEEeCCCccc---CCCC
Q psy17083 15 CRPGWRGEFCD--QCKPYP-GCKHGYCNG--SSWQCICDTNWGG---ILCD 57 (60)
Q Consensus 15 C~~g~~g~~C~--~c~~~~-~C~~g~C~~--~~~~C~C~~g~~G---~~C~ 57 (60)
...+|.+..|+ +|...+ .|. .+|++ +.|.|.|++||.| ..|+
T Consensus 18 ~~~~~~~~~Cd~neC~~~~~~C~-~~C~n~~g~y~C~C~~Gy~g~~g~~C~ 67 (107)
T 2w2n_E 18 TENLYFQGAMGTNECLDNNGGCS-YVCNDLKIGYECLCPDGFQLVAQRRCE 67 (107)
T ss_dssp --CCCCSCCBSCCGGGTGGGGCS-SEEECCSBSCEEECCTTCEEETTTEEE
T ss_pred cCCCcCCCCCcCccCcCCCCCCC-CEeEeCCCCeEEECCCCccccCCCccc
Confidence 35678888874 243211 132 37876 6799999999998 5664
No 87
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.43 E-value=0.00095 Score=29.76 Aligned_cols=17 Identities=29% Similarity=0.706 Sum_probs=15.2
Q ss_pred CCeeEcCCCCcCCCCCC
Q psy17083 10 RASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~~ 26 (60)
.+.|.|++||+|.+|+.
T Consensus 28 ~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 28 KYACNCVVGYIGERCQY 44 (53)
T ss_dssp EEEEEECTTEESTTSCE
T ss_pred CEEEecCCCCcCCCCCc
Confidence 47899999999999974
No 88
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.39 E-value=0.0014 Score=29.89 Aligned_cols=17 Identities=35% Similarity=0.894 Sum_probs=15.2
Q ss_pred CCCeeEcCCCCcCCCCC
Q psy17083 9 IRASVQCRPGWRGEFCD 25 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~ 25 (60)
..+.|.|++||+|.+|+
T Consensus 30 ~~y~C~C~~Gf~G~~Ce 46 (63)
T 1hae_A 30 SRYLCKCQPGFTGARCT 46 (63)
T ss_dssp CCEEEECCTTEESTTSC
T ss_pred CCEEEECCCCCcCCccC
Confidence 35789999999999996
No 89
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.36 E-value=0.0016 Score=34.48 Aligned_cols=31 Identities=26% Similarity=0.725 Sum_probs=21.9
Q ss_pred CCCC-CCCCCCCeEEc--CCCeEEeCCCcc----cCCCC
Q psy17083 26 QCKP-YPGCKHGYCNG--SSWQCICDTNWG----GILCD 57 (60)
Q Consensus 26 ~c~~-~~~C~~g~C~~--~~~~C~C~~g~~----G~~C~ 57 (60)
+|.. .| |.+++|++ +.|+|.|++||. |..|+
T Consensus 5 eC~~~~~-C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~ 42 (162)
T 1uzk_A 5 ECLDPTT-CISGNCVNTPGSYICDCPPDFELNPTRVGCV 42 (162)
T ss_dssp GGGSTTS-SBTSEEEEETTEEEEECCTTCEECTTSSBEE
T ss_pred cCCCCCC-CCCCEeECCCCCEEEeCCCCCeECCCCCccc
Confidence 4542 45 76778876 678888888887 66664
No 90
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.32 E-value=0.0022 Score=40.87 Aligned_cols=44 Identities=20% Similarity=0.678 Sum_probs=31.9
Q ss_pred CCCeeEcCCCCc---CCCCC---CCCCCCCCCCCeEEc--CCCeEEeCCCccc
Q psy17083 9 IRASVQCRPGWR---GEFCD---QCKPYPGCKHGYCNG--SSWQCICDTNWGG 53 (60)
Q Consensus 9 ~~~~C~C~~g~~---g~~C~---~c~~~~~C~~g~C~~--~~~~C~C~~g~~G 53 (60)
..|.|.|++||. |..|+ +|.....|. ..|++ +.|.|.|++||.+
T Consensus 313 ~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~-~~C~n~~g~y~C~C~~G~~~ 364 (699)
T 1n7d_A 313 IGYECLCPDGFQLVAQRRCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQL 364 (699)
T ss_dssp TCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCT-TTCCBCSSCBCCCCCSSCBC
T ss_pred CCcEEeCCCCeEcCCCCcccCccccCCCCccc-cccccCCCCeeeeeeccccc
Confidence 468999999998 66775 454222254 35665 7899999999975
No 91
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=96.30 E-value=0.0047 Score=37.30 Aligned_cols=50 Identities=28% Similarity=0.761 Sum_probs=33.4
Q ss_pred CCCeeEcCCCCcCCCCCCCCCC----C----------C---CC---CC-eEE---------cCCCeE-EeCCCcccCCCC
Q psy17083 9 IRASVQCRPGWRGEFCDQCKPY----P----------G---CK---HG-YCN---------GSSWQC-ICDTNWGGILCD 57 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~c~~~----~----------~---C~---~g-~C~---------~~~~~C-~C~~g~~G~~C~ 57 (60)
..+.|.|.++|.|.+|+.|... | . |. ++ .|. ...++| .|.++|.|..|+
T Consensus 270 ~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~Ce 349 (375)
T 4aqt_A 270 DKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCE 349 (375)
T ss_dssp SCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTTEESTTSC
T ss_pred CCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCCCCCCCCCcCCCCC
Confidence 3457899999999999976431 1 1 21 12 232 144678 499999999997
Q ss_pred c
Q psy17083 58 Q 58 (60)
Q Consensus 58 ~ 58 (60)
+
T Consensus 350 ~ 350 (375)
T 4aqt_A 350 R 350 (375)
T ss_dssp E
T ss_pred C
Confidence 4
No 92
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=96.26 E-value=0.00087 Score=43.42 Aligned_cols=26 Identities=35% Similarity=0.864 Sum_probs=23.4
Q ss_pred CCCCCCccCCCeeEcCCCCcCCCCCC
Q psy17083 1 MSNRLGRNIRASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 1 ~~~~~g~~~~~~C~C~~g~~g~~C~~ 26 (60)
+++.||.++.+.|+|++||.|..|+.
T Consensus 540 ~C~ghG~C~~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 540 MCSGHGRCVQGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp GGGGSEEEETTEEEECTTEESTTSCE
T ss_pred ccCCCcEECCCCEeeCCCccCCCcCc
Confidence 46789999999999999999999974
No 93
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.25 E-value=0.0017 Score=28.68 Aligned_cols=17 Identities=29% Similarity=0.669 Sum_probs=14.9
Q ss_pred CCeeEcCCCCcCCCCCC
Q psy17083 10 RASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~~ 26 (60)
.+.|.|++||+|.+|+.
T Consensus 32 ~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 32 VYSCECAIGFMGQRCEY 48 (52)
T ss_dssp EEEEECCTTEESTTSCE
T ss_pred CEEEECCCCCcCCCCcc
Confidence 46899999999999973
No 94
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.24 E-value=0.0019 Score=31.05 Aligned_cols=32 Identities=28% Similarity=0.786 Sum_probs=22.8
Q ss_pred CCCCCC-CCCCCeEEc--CCCeEEeCCCcc-----cCCCC
Q psy17083 26 QCKPYP-GCKHGYCNG--SSWQCICDTNWG-----GILCD 57 (60)
Q Consensus 26 ~c~~~~-~C~~g~C~~--~~~~C~C~~g~~-----G~~C~ 57 (60)
+|...+ .|.+++|++ +.|.|.|++||. |..|+
T Consensus 5 eC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~ 44 (86)
T 1lmj_A 5 ECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44 (86)
T ss_dssp TTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEE
T ss_pred cccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccC
Confidence 454332 277778986 778999999998 56663
No 95
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.22 E-value=0.0012 Score=33.96 Aligned_cols=27 Identities=30% Similarity=0.840 Sum_probs=21.7
Q ss_pred CCC-CeEEcC----CC-eEEeCCCcccCCCCcC
Q psy17083 33 CKH-GYCNGS----SW-QCICDTNWGGILCDQG 59 (60)
Q Consensus 33 C~~-g~C~~~----~~-~C~C~~g~~G~~C~~~ 59 (60)
|+| |+|++. .+ .|.|+++|+|..|+++
T Consensus 3 C~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~ 35 (122)
T 2fd6_A 3 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID 35 (122)
T ss_dssp CCSSCEEEECTTTTTCEEEECCTTEESTTSCEE
T ss_pred CCCcCCcCCCcccCCCCCccCCCCCCCcccccc
Confidence 775 689752 34 8999999999999865
No 96
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=96.21 E-value=0.0035 Score=38.78 Aligned_cols=22 Identities=32% Similarity=0.671 Sum_probs=17.1
Q ss_pred eEEcCCCeEEeCCCcccCCCCc
Q psy17083 37 YCNGSSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 37 ~C~~~~~~C~C~~g~~G~~C~~ 58 (60)
.|....++|.|+++|.|..|++
T Consensus 454 ~Cd~~tg~C~C~~g~~G~~Ce~ 475 (525)
T 4aqs_A 454 PCDSETGYCYCKRLVTGQRCDQ 475 (525)
T ss_dssp CBCTTTCCBCBCTTCCSTTTCC
T ss_pred cccCCCCEEECCCCCcCCCccc
Confidence 3443567899999999999963
No 97
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.01 E-value=0.0022 Score=29.03 Aligned_cols=17 Identities=29% Similarity=0.669 Sum_probs=14.9
Q ss_pred CCeeEcCCCCcCCCCCC
Q psy17083 10 RASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~~ 26 (60)
.+.|.|++||+|.+|+.
T Consensus 32 ~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 32 VYSCECAIGFMGQRCEY 48 (58)
T ss_dssp EEEEEECTTEESSSSCE
T ss_pred CEEeECCCCCccCCCcc
Confidence 35899999999999974
No 98
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=95.98 E-value=0.0042 Score=27.49 Aligned_cols=18 Identities=22% Similarity=0.719 Sum_probs=15.4
Q ss_pred CCCeeEcCCCCcCCCCCC
Q psy17083 9 IRASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~ 26 (60)
....|.|++||+|.+|+.
T Consensus 28 ~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 28 DKPACVCHSGYVGARCEH 45 (50)
T ss_pred CCeEEECCCCCcccCCCc
Confidence 346899999999999974
No 99
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.92 E-value=0.0015 Score=31.46 Aligned_cols=32 Identities=22% Similarity=0.820 Sum_probs=21.6
Q ss_pred CCCCCCC-CCCCeEEc--CCCeEEeCCCcc----cCCCC
Q psy17083 26 QCKPYPG-CKHGYCNG--SSWQCICDTNWG----GILCD 57 (60)
Q Consensus 26 ~c~~~~~-C~~g~C~~--~~~~C~C~~g~~----G~~C~ 57 (60)
+|...|. |.+++|++ +.|.|.|++||. |..|+
T Consensus 5 eC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~ 43 (87)
T 1z6c_A 5 ECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCE 43 (87)
T ss_dssp SSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEE
T ss_pred cccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCC
Confidence 3444442 54467765 678999999998 66663
No 100
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.91 E-value=0.0074 Score=31.97 Aligned_cols=27 Identities=30% Similarity=0.840 Sum_probs=19.6
Q ss_pred CCC-CeEEcC----CC-eEEeCCCcccCCCCcC
Q psy17083 33 CKH-GYCNGS----SW-QCICDTNWGGILCDQG 59 (60)
Q Consensus 33 C~~-g~C~~~----~~-~C~C~~g~~G~~C~~~ 59 (60)
|+| |+|+.. .+ .|.|+++|.|..|+++
T Consensus 15 C~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~ 47 (145)
T 2i9a_A 15 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID 47 (145)
T ss_dssp CCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred CCCCCCcCCCccccCCccccCCCCCCCCceecc
Confidence 775 688642 23 7889999999888764
No 101
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=95.54 E-value=0.011 Score=35.39 Aligned_cols=32 Identities=28% Similarity=0.908 Sum_probs=26.1
Q ss_pred CCCCCCCCCC-CeEEc--CCCeEEeCC-CcccCCCCc
Q psy17083 26 QCKPYPGCKH-GYCNG--SSWQCICDT-NWGGILCDQ 58 (60)
Q Consensus 26 ~c~~~~~C~~-g~C~~--~~~~C~C~~-g~~G~~C~~ 58 (60)
.|...| |.+ |+|++ ..+.|.|+. +|.|+.|+.
T Consensus 187 ~C~~~p-C~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 187 TCQEDS-CSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp CCCTTS-SSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred Cccccc-CCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 466677 885 79987 678999996 999999975
No 102
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.18 E-value=0.0067 Score=39.46 Aligned_cols=44 Identities=20% Similarity=0.678 Sum_probs=31.1
Q ss_pred CCCeeEcCCCCc---CCCCC---CCCCCCCCCCCeEEc--CCCeEEeCCCccc
Q psy17083 9 IRASVQCRPGWR---GEFCD---QCKPYPGCKHGYCNG--SSWQCICDTNWGG 53 (60)
Q Consensus 9 ~~~~C~C~~g~~---g~~C~---~c~~~~~C~~g~C~~--~~~~C~C~~g~~G 53 (60)
..|.|.|++||. |..|+ +|.....|. ..|++ +.|.|.|++||..
T Consensus 331 ~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~-~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 331 IGYECLCPDGFQLVAQRRCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp BSEEEECCTTCEEETTTEEECCCCCSSSSSCT-TTCCBCSSCBCCCCCSSEEC
T ss_pred CCcccCCCCCCccCCCCccccCcccCCCCCCC-CeeecCCCCceeecCCCCEe
Confidence 468999999995 67774 454222243 35765 7899999999964
No 103
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=94.73 E-value=0.026 Score=38.18 Aligned_cols=33 Identities=30% Similarity=0.895 Sum_probs=26.7
Q ss_pred CCCCCCCCCC-CeEEc--CCCeEEeC-CCcccCCCCcC
Q psy17083 26 QCKPYPGCKH-GYCNG--SSWQCICD-TNWGGILCDQG 59 (60)
Q Consensus 26 ~c~~~~~C~~-g~C~~--~~~~C~C~-~g~~G~~C~~~ 59 (60)
.|...| |.+ |+|.. ..+.|.|+ ++|.|+.|+.+
T Consensus 1019 ~C~~~p-C~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1019 TCQEDS-CSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp CCCTTS-SSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred ceECCc-CCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 466677 885 79986 66899999 69999999764
No 104
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=94.56 E-value=0.031 Score=34.09 Aligned_cols=48 Identities=29% Similarity=0.698 Sum_probs=33.2
Q ss_pred CeeEcCCCCcCCCCCCCCCCC--------------CC---C-C--C-eEE------------------cCCCeEE-eCCC
Q psy17083 11 ASVQCRPGWRGEFCDQCKPYP--------------GC---K-H--G-YCN------------------GSSWQCI-CDTN 50 (60)
Q Consensus 11 ~~C~C~~g~~g~~C~~c~~~~--------------~C---~-~--g-~C~------------------~~~~~C~-C~~g 50 (60)
+.|.|..++.|.+|+.|.... .| . + + .|. ...+.|. |..+
T Consensus 286 g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~n 365 (403)
T 2y38_A 286 LQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHH 365 (403)
T ss_dssp EEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSS
T ss_pred eEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCc
Confidence 569999999999999764310 12 2 2 2 463 1357895 9999
Q ss_pred cccCCCCc
Q psy17083 51 WGGILCDQ 58 (60)
Q Consensus 51 ~~G~~C~~ 58 (60)
+.|..|++
T Consensus 366 t~G~~CEr 373 (403)
T 2y38_A 366 TTGINCER 373 (403)
T ss_dssp EESTTSCE
T ss_pred CcCCCCCc
Confidence 99999874
No 105
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=94.53 E-value=0.038 Score=23.84 Aligned_cols=20 Identities=20% Similarity=0.788 Sum_probs=16.3
Q ss_pred CCCCeEEc--CCCeEEeCCCccc
Q psy17083 33 CKHGYCNG--SSWQCICDTNWGG 53 (60)
Q Consensus 33 C~~g~C~~--~~~~C~C~~g~~G 53 (60)
|. .+|++ +.|.|.|++||.+
T Consensus 22 C~-~~C~n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 22 CQ-HLCHNYVGGYFCSCRPGYEL 43 (53)
T ss_dssp TS-SEEEEETTEEEEECSTTCEE
T ss_pred CC-CEeECCCCCeEEECCCCCeE
Confidence 65 47876 7799999999975
No 106
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=94.37 E-value=0.018 Score=27.78 Aligned_cols=17 Identities=41% Similarity=0.958 Sum_probs=14.7
Q ss_pred CCeeEcCCCCcCCCCCC
Q psy17083 10 RASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~~ 26 (60)
.+.|.|++||+|.+|+.
T Consensus 61 ~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 61 APSCICHPGYHGERCHG 77 (79)
T ss_dssp BCCEEECTTEESTTCCE
T ss_pred CeEEEcCCCcccccccc
Confidence 46799999999999963
No 107
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=94.25 E-value=0.018 Score=30.15 Aligned_cols=18 Identities=28% Similarity=0.661 Sum_probs=15.8
Q ss_pred CCCeeEcCCCCcCCCCCC
Q psy17083 9 IRASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 9 ~~~~C~C~~g~~g~~C~~ 26 (60)
..+.|.|++||.|..|+.
T Consensus 138 ~~~~c~C~~g~~G~~Ce~ 155 (162)
T 1g1s_A 138 GNYTCSCYPGFYGPECEY 155 (162)
T ss_dssp SSEEEEECTTEESTTSCE
T ss_pred CCceEeCCCCCcCccccc
Confidence 468999999999999974
No 108
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=94.18 E-value=0.0048 Score=37.51 Aligned_cols=23 Identities=17% Similarity=0.297 Sum_probs=20.4
Q ss_pred CCCCCCccCCCeeEcCCCCcCCC
Q psy17083 1 MSNRLGRNIRASVQCRPGWRGEF 23 (60)
Q Consensus 1 ~~~~~g~~~~~~C~C~~g~~g~~ 23 (60)
|+++||.++.+.|.|++||.|..
T Consensus 197 ~CsGhG~C~~g~C~Cd~G~~g~d 219 (387)
T 2ddu_A 197 YCSGHGDCISGVCFCDLGYTAAQ 219 (387)
T ss_dssp GGGGSEEEETTEEEECTTEEEET
T ss_pred ccCCCceecCCeEEecCCcccCC
Confidence 46789999999999999999975
No 109
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=93.75 E-value=0.011 Score=36.27 Aligned_cols=46 Identities=24% Similarity=0.699 Sum_probs=4.1
Q ss_pred CCeeE-cCCCCcCCCCCCCCCCCCCCC-CeEEcCCCeEEeCCCcccCCCCc
Q psy17083 10 RASVQ-CRPGWRGEFCDQCKPYPGCKH-GYCNGSSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 10 ~~~C~-C~~g~~g~~C~~c~~~~~C~~-g~C~~~~~~C~C~~g~~G~~C~~ 58 (60)
.+.|+ |.-.+.|..|+.- ..+ |.+ |+|.+.. +|.|++||.|..|++
T Consensus 351 ~~~C~pC~Cn~~g~~CD~~-t~~-C~ngg~C~~~~-~C~C~~G~~G~~Ce~ 398 (426)
T 3zyj_B 351 ANACIPSISSIGTNVCDNE-LLH-CQNGGTCHNNV-RCLCPAAYTGILCEK 398 (426)
T ss_dssp CCCCCCCCC------------------------------------------
T ss_pred CCcccCCCCCCCcCccccC-ccc-CCCCCCcCCCC-CCcCCCCCcCCCCcC
Confidence 45564 4445567778642 235 874 5788633 899999999988864
No 110
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=93.72 E-value=0.044 Score=37.15 Aligned_cols=32 Identities=34% Similarity=0.972 Sum_probs=26.3
Q ss_pred CCCCCCCCCC-CeEEc--CCCeEEeC-CCcccCCCCc
Q psy17083 26 QCKPYPGCKH-GYCNG--SSWQCICD-TNWGGILCDQ 58 (60)
Q Consensus 26 ~c~~~~~C~~-g~C~~--~~~~C~C~-~g~~G~~C~~ 58 (60)
.|...| |.+ |.|.+ ..+.|.|+ ++|.|..|+.
T Consensus 621 ~C~~~p-C~ngg~C~~~~~~~~C~C~~~g~~G~~C~~ 656 (1245)
T 3qcw_A 621 PCLSNP-CKNNGMCRDGWNRYVCDCSGTGYLGRSCER 656 (1245)
T ss_dssp GGGSCC-CCTTCEEEECSSSEEEECTTTTEESTTSCE
T ss_pred CCCccC-CCCCCEEeCCCCCeEEECCCCCcccccCcc
Confidence 466677 984 79987 66899999 7999999975
No 111
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=92.79 E-value=0.038 Score=28.92 Aligned_cols=17 Identities=24% Similarity=0.626 Sum_probs=15.2
Q ss_pred CCeeEcCCCCcCCCCCC
Q psy17083 10 RASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~~ 26 (60)
.+.|.|.+||.|..|+.
T Consensus 139 ~~~c~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 139 NYTCNCDVGYYGPQCQF 155 (164)
T ss_dssp EEEEEECTTCBSSSSCB
T ss_pred CceeeeCCCcccccccc
Confidence 57999999999999974
No 112
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=92.58 E-value=0.037 Score=34.46 Aligned_cols=15 Identities=33% Similarity=0.953 Sum_probs=5.0
Q ss_pred CeEEeCCCcccCCCC
Q psy17083 43 WQCICDTNWGGILCD 57 (60)
Q Consensus 43 ~~C~C~~g~~G~~C~ 57 (60)
+.|.|.+||.|..|+
T Consensus 458 G~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 458 GVCRCGPGWLGSQCE 472 (472)
T ss_dssp TEEEECTTC------
T ss_pred CceECcCCCCCCCCC
Confidence 455555555555553
No 113
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=90.95 E-value=0.12 Score=30.77 Aligned_cols=22 Identities=23% Similarity=0.818 Sum_probs=17.7
Q ss_pred CeEEc--CCCeEEeCCCcc---cCCCC
Q psy17083 36 GYCNG--SSWQCICDTNWG---GILCD 57 (60)
Q Consensus 36 g~C~~--~~~~C~C~~g~~---G~~C~ 57 (60)
+.|++ +.|.|.|++||. |..|+
T Consensus 12 ~~C~~~~~~y~C~C~~G~~~~~~~~C~ 38 (400)
T 3p5b_L 12 HVCNDLKIGYECLCPDGFQLVAQRRCE 38 (400)
T ss_dssp SEEEECSSSEEEECCTTEEECSSSCEE
T ss_pred CEeECCCCCeEEECCCCCCcCCCCccc
Confidence 47876 678999999998 67674
No 114
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=90.47 E-value=0.05 Score=34.15 Aligned_cols=21 Identities=29% Similarity=0.620 Sum_probs=0.0
Q ss_pred CCCccCCCeeEcCCCCcCCCC
Q psy17083 4 RLGRNIRASVQCRPGWRGEFC 24 (60)
Q Consensus 4 ~~g~~~~~~C~C~~g~~g~~C 24 (60)
.+|...-|.|.|.+||.|..|
T Consensus 472 g~G~~~CG~C~C~~G~~G~~C 492 (503)
T 3v4v_B 472 GQGHLQCGVCSCAPGRLGRLC 492 (503)
T ss_dssp ---------------------
T ss_pred CCeeEeCCceECcCCCcCCCC
Confidence 455555567777777777777
No 115
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=88.43 E-value=0.088 Score=31.12 Aligned_cols=20 Identities=35% Similarity=0.856 Sum_probs=0.0
Q ss_pred eEEc--CCCeEEeCCCcc----cCCC
Q psy17083 37 YCNG--SSWQCICDTNWG----GILC 56 (60)
Q Consensus 37 ~C~~--~~~~C~C~~g~~----G~~C 56 (60)
.|.+ +.+.|.|++||. |..|
T Consensus 16 ~C~~~~g~~~C~C~~G~~l~~~~~~C 41 (386)
T 3v65_B 16 KCQMIRGAVQCTCHTGYRLTEDGRTC 41 (386)
T ss_dssp --------------------------
T ss_pred CCcCCCCCcEeECCCCceECCCCCcc
Confidence 5654 568999999998 7777
No 116
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=88.43 E-value=0.29 Score=28.53 Aligned_cols=23 Identities=35% Similarity=0.860 Sum_probs=19.0
Q ss_pred CC-CCeEEcCCCeEEeCCCcccCCCC
Q psy17083 33 CK-HGYCNGSSWQCICDTNWGGILCD 57 (60)
Q Consensus 33 C~-~g~C~~~~~~C~C~~g~~G~~C~ 57 (60)
|. +|+|.- +.|.|.+||.|..|+
T Consensus 198 C~g~G~~~C--G~C~C~~g~~G~~Ce 221 (280)
T 2p26_A 198 CHGKGFLEC--GICRCDTGYIGKNCE 221 (280)
T ss_dssp GGGSEEEET--TEEEECTTEESTTSC
T ss_pred cCCCCeECC--CceeCCCCCcCCcce
Confidence 55 577773 789999999999986
No 117
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=87.47 E-value=0.28 Score=28.76 Aligned_cols=24 Identities=33% Similarity=0.966 Sum_probs=19.3
Q ss_pred CC-CCeEEc--CCCeEEeCCCcc--cCCC
Q psy17083 33 CK-HGYCNG--SSWQCICDTNWG--GILC 56 (60)
Q Consensus 33 C~-~g~C~~--~~~~C~C~~g~~--G~~C 56 (60)
|. ++.|++ ++|.|.|.+||. |..|
T Consensus 15 C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C 43 (285)
T 1gl4_A 15 CSVHAECRDYATGFCCRCVANYTGNGRQC 43 (285)
T ss_dssp SCTTEEEEECSSCEEEEECTTEEECSSSE
T ss_pred CCCCCEeEcCCCCeEEEcCCCCCCCCCcC
Confidence 65 568887 889999999998 5556
No 118
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=87.44 E-value=0.44 Score=30.50 Aligned_cols=21 Identities=24% Similarity=0.879 Sum_probs=16.3
Q ss_pred eEEc--CCCeEEeCCCcc---cCCCC
Q psy17083 37 YCNG--SSWQCICDTNWG---GILCD 57 (60)
Q Consensus 37 ~C~~--~~~~C~C~~g~~---G~~C~ 57 (60)
.|++ +.|.|.|++||. |..|+
T Consensus 307 ~C~~~~~~~~C~C~~G~~~~~~~~C~ 332 (699)
T 1n7d_A 307 VCNDLKIGYECLCPDGFQLVAQRRCE 332 (699)
T ss_dssp TCCCCTTCCCCCCCSSSCCCSSSCCC
T ss_pred CcccCCCCcEEeCCCCeEcCCCCccc
Confidence 4654 679999999998 66674
No 119
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=86.15 E-value=0.35 Score=30.34 Aligned_cols=50 Identities=18% Similarity=0.422 Sum_probs=29.6
Q ss_pred CCCcc--CCCeeEcCCCCc--CCCCCCCCCC---CCCCCCeEE----------cCCCeEEeCCCccc
Q psy17083 4 RLGRN--IRASVQCRPGWR--GEFCDQCKPY---PGCKHGYCN----------GSSWQCICDTNWGG 53 (60)
Q Consensus 4 ~~g~~--~~~~C~C~~g~~--g~~C~~c~~~---~~C~~g~C~----------~~~~~C~C~~g~~G 53 (60)
.+|.. ..+.|.|.+||. +..|+.|... +....+.|. .+.+.|.|..+|..
T Consensus 254 ~dG~w~~p~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~r 320 (536)
T 3fl7_A 254 VDGEWLVPIGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFR 320 (536)
T ss_dssp TTSCBCCCBCCCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCBC
T ss_pred CCCCEecccCcEeccCccccCCceeeecCCCCCcccCCCCccccCCCCCCCCCCCccEEEEeccccc
Confidence 44542 458999999997 4556555332 101122222 16678999998863
No 120
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=83.70 E-value=0.38 Score=30.18 Aligned_cols=23 Identities=22% Similarity=0.491 Sum_probs=12.5
Q ss_pred CCCc-cCCCeeEcCCCCcCCCCCC
Q psy17083 4 RLGR-NIRASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 4 ~~g~-~~~~~C~C~~g~~g~~C~~ 26 (60)
.||. +....|.|.+||..+.|+.
T Consensus 458 ~~GVCNn~~~CHC~~GwaPP~C~~ 481 (510)
T 3g5c_A 458 GNGVCSNELKCVCNRHWIGSDCNT 481 (510)
T ss_dssp GTEEEBTTSCEEECTTEESTTSCE
T ss_pred CCCeeCCCCCcCCCCCCCCCCCCC
Confidence 3443 2344566666666666653
No 121
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=82.70 E-value=0.42 Score=30.52 Aligned_cols=17 Identities=29% Similarity=0.759 Sum_probs=15.3
Q ss_pred CCeeEcC-CCCcCCCCCC
Q psy17083 10 RASVQCR-PGWRGEFCDQ 26 (60)
Q Consensus 10 ~~~C~C~-~g~~g~~C~~ 26 (60)
.|.|.|+ +||+|.+|+.
T Consensus 22 ~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 22 QYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp EEEEECTTSSEETTTTCE
T ss_pred CeEEecCCCCccCCCCCC
Confidence 5899999 9999999973
No 122
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=82.29 E-value=0.54 Score=20.49 Aligned_cols=19 Identities=26% Similarity=0.934 Sum_probs=14.8
Q ss_pred CCCCeEEc--CCCeEEeCCCcc
Q psy17083 33 CKHGYCNG--SSWQCICDTNWG 52 (60)
Q Consensus 33 C~~g~C~~--~~~~C~C~~g~~ 52 (60)
|.+ .|++ ++|.|.|++||.
T Consensus 11 C~~-~C~nt~Gsy~C~C~~Gy~ 31 (55)
T 2jkh_L 11 CDQ-FCHEEQNSVVCSCARGYT 31 (55)
T ss_dssp CSS-EEEEETTEEEEECCTTEE
T ss_pred cCc-EeEcCCCCeEEeCCCCCE
Confidence 543 6775 778999999996
No 123
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=82.15 E-value=0.45 Score=30.06 Aligned_cols=17 Identities=29% Similarity=0.747 Sum_probs=15.4
Q ss_pred CCeeEcC-CCCcCCCCCC
Q psy17083 10 RASVQCR-PGWRGEFCDQ 26 (60)
Q Consensus 10 ~~~C~C~-~g~~g~~C~~ 26 (60)
.|.|.|+ +||+|.+|+.
T Consensus 23 ~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 23 RYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp EEEEECTTSSEETTTTCE
T ss_pred ceEeeCCCCCcCCCCCCC
Confidence 5899999 9999999974
No 124
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=81.55 E-value=1.1 Score=29.41 Aligned_cols=21 Identities=24% Similarity=0.879 Sum_probs=16.3
Q ss_pred eEEc--CCCeEEeCCCcc---cCCCC
Q psy17083 37 YCNG--SSWQCICDTNWG---GILCD 57 (60)
Q Consensus 37 ~C~~--~~~~C~C~~g~~---G~~C~ 57 (60)
.|++ +.|.|.|++||. |..|+
T Consensus 325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~ 350 (791)
T 3m0c_C 325 VCNDLKIGYECLCPDGFQLVAQRRCE 350 (791)
T ss_dssp EEEECSBSEEEECCTTCEEETTTEEE
T ss_pred cccCCCCCcccCCCCCCccCCCCccc
Confidence 6775 678999999995 66663
No 125
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=80.95 E-value=1.1 Score=29.90 Aligned_cols=26 Identities=23% Similarity=0.603 Sum_probs=14.2
Q ss_pred CC-CCeEEc--CCCeEEeCCCcccCCCCc
Q psy17083 33 CK-HGYCNG--SSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 33 C~-~g~C~~--~~~~C~C~~g~~G~~C~~ 58 (60)
|. +|.++. ....|.|+++|.|..|+.
T Consensus 505 C~ngg~~~l~g~~C~C~C~~g~~G~~Ce~ 533 (913)
T 3t5o_A 505 CPNNGRPTLSGTECLCVCQSGTYGENCEK 533 (913)
T ss_dssp BTTTBEEEEETTEEEEECCTTBCSTTSCC
T ss_pred CCCCCEeecCCCceEEEccCCccccCccC
Confidence 65 345542 233456666666666654
No 126
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=78.98 E-value=1.6 Score=22.92 Aligned_cols=24 Identities=25% Similarity=0.854 Sum_probs=17.9
Q ss_pred CCCCeEEc--CCCeEEeCCCcc----cCCCC
Q psy17083 33 CKHGYCNG--SSWQCICDTNWG----GILCD 57 (60)
Q Consensus 33 C~~g~C~~--~~~~C~C~~g~~----G~~C~ 57 (60)
|.+ .|++ +.+.|.|++||. +..|.
T Consensus 137 C~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 137 CDH-HCHNHLGGFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp SSS-EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCC-ccccCCCCEEEeCCCCcEECCCCCccc
Confidence 654 6876 678999999997 55553
No 127
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=78.36 E-value=0.87 Score=28.47 Aligned_cols=22 Identities=32% Similarity=0.765 Sum_probs=13.0
Q ss_pred CCCccCCCeeEcCCCCcCCCCC
Q psy17083 4 RLGRNIRASVQCRPGWRGEFCD 25 (60)
Q Consensus 4 ~~g~~~~~~C~C~~g~~g~~C~ 25 (60)
.||...-|.|.|.+||.|..|+
T Consensus 451 g~G~~~CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 451 GNGTFECGVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTEEEETTEEEECTTC------
T ss_pred CCeeEeCCceECcCCCCCCCCC
Confidence 4666677899999999999885
No 128
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=78.08 E-value=2.7 Score=26.43 Aligned_cols=25 Identities=32% Similarity=1.147 Sum_probs=21.4
Q ss_pred CC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083 33 CK-HGYCNGSSWQCICDTNWGGILCDQ 58 (60)
Q Consensus 33 C~-~g~C~~~~~~C~C~~g~~G~~C~~ 58 (60)
|. +|.|. ....|.|..||..+.|+.
T Consensus 456 C~~~GVCN-n~~~CHC~~GwaPP~C~~ 481 (510)
T 3g5c_A 456 CSGNGVCS-NELKCVCNRHWIGSDCNT 481 (510)
T ss_dssp GGGTEEEB-TTSCEEECTTEESTTSCE
T ss_pred cCCCCeeC-CCCCcCCCCCCCCCCCCC
Confidence 76 68898 567899999999999975
No 129
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=75.21 E-value=2 Score=19.75 Aligned_cols=6 Identities=17% Similarity=0.811 Sum_probs=4.1
Q ss_pred eCCCcc
Q psy17083 47 CDTNWG 52 (60)
Q Consensus 47 C~~g~~ 52 (60)
|++||.
T Consensus 57 C~~Gy~ 62 (71)
T 2kl7_A 57 CPPGYE 62 (71)
T ss_dssp SCTTEE
T ss_pred CCCCee
Confidence 777774
No 130
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=73.57 E-value=1.9 Score=26.66 Aligned_cols=18 Identities=22% Similarity=0.900 Sum_probs=15.3
Q ss_pred CCeEEeCCCcccCCCCcC
Q psy17083 42 SWQCICDTNWGGILCDQG 59 (60)
Q Consensus 42 ~~~C~C~~g~~G~~C~~~ 59 (60)
.+.|.|..||.|..|+..
T Consensus 396 ~F~C~Cy~gw~G~~C~~~ 413 (424)
T 2pe4_A 396 EFKCRCYPGWQAPWCERK 413 (424)
T ss_dssp HEEEEECTTBCTTTTCSB
T ss_pred CcEeeccCCCCcccccCC
Confidence 468999999999999753
No 131
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=69.23 E-value=2 Score=18.52 Aligned_cols=16 Identities=25% Similarity=0.941 Sum_probs=12.5
Q ss_pred eEEc--C-CCeEEeCCCcc
Q psy17083 37 YCNG--S-SWQCICDTNWG 52 (60)
Q Consensus 37 ~C~~--~-~~~C~C~~g~~ 52 (60)
.|++ + ++.|.|++||.
T Consensus 12 ~C~n~~ggs~~C~C~~Gy~ 30 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGYS 30 (53)
T ss_dssp EEEEETTTEEEEECCTTEE
T ss_pred EeEcCCCCCEEeeCCCCCE
Confidence 4665 4 58999999996
No 132
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=66.85 E-value=2.9 Score=25.91 Aligned_cols=17 Identities=29% Similarity=1.148 Sum_probs=15.2
Q ss_pred CCeeEcCCCCcCCCCCC
Q psy17083 10 RASVQCRPGWRGEFCDQ 26 (60)
Q Consensus 10 ~~~C~C~~g~~g~~C~~ 26 (60)
.+.|+|-.||.|..|++
T Consensus 396 ~F~C~Cy~gw~G~~C~~ 412 (424)
T 2pe4_A 396 EFKCRCYPGWQAPWCER 412 (424)
T ss_dssp HEEEEECTTBCTTTTCS
T ss_pred CcEeeccCCCCcccccC
Confidence 46899999999999975
No 133
>1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R
Probab=64.86 E-value=2.6 Score=22.30 Aligned_cols=41 Identities=22% Similarity=0.319 Sum_probs=24.6
Q ss_pred CeeEcCCCCcC----CCCCCCCCCCCCCCCeEEc------CCCeEEeCCCcc
Q psy17083 11 ASVQCRPGWRG----EFCDQCKPYPGCKHGYCNG------SSWQCICDTNWG 52 (60)
Q Consensus 11 ~~C~C~~g~~g----~~C~~c~~~~~C~~g~C~~------~~~~C~C~~g~~ 52 (60)
-.|.|++||+- ..++.|..-..|..|. +. ....|.|++||.
T Consensus 84 t~C~C~~G~y~~~~~~~~~~C~~C~~C~~G~-v~~~ct~~~dtvC~C~~G~y 134 (162)
T 1ext_A 84 TVCGCRKNQYRHYWSENLFQCFNCSLCLNGT-VHLSCQEKQNTVCTCHAGFF 134 (162)
T ss_dssp CEEECCTTEEEEEEETTEEEEEECCCCTTEE-EEECCBTTBCCEEEECTTEE
T ss_pred CCccCCCCceeccCCCCcccccCCCcCCCCE-EeccccCCCCccccCCCCee
Confidence 47899999864 2333343322366565 21 345788998875
No 134
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=64.44 E-value=2.8 Score=19.19 Aligned_cols=16 Identities=25% Similarity=0.941 Sum_probs=12.6
Q ss_pred eEEc--C-CCeEEeCCCcc
Q psy17083 37 YCNG--S-SWQCICDTNWG 52 (60)
Q Consensus 37 ~C~~--~-~~~C~C~~g~~ 52 (60)
.|++ + ++.|.|++||.
T Consensus 18 ~C~n~~g~s~~C~C~~Gy~ 36 (69)
T 1kli_L 18 YCSDHTGTKRSCRCHEGYS 36 (69)
T ss_dssp EEEEETTTEEEEECCTTEE
T ss_pred EeEcCCCCCEEEeCCCCCe
Confidence 5665 4 68999999995
No 135
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=62.08 E-value=3.2 Score=18.30 Aligned_cols=16 Identities=19% Similarity=0.819 Sum_probs=12.3
Q ss_pred eEEc---CCCeEEeCCCcc
Q psy17083 37 YCNG---SSWQCICDTNWG 52 (60)
Q Consensus 37 ~C~~---~~~~C~C~~g~~ 52 (60)
.|++ +.+.|.|++||.
T Consensus 12 ~C~n~~~gs~~C~C~~Gy~ 30 (59)
T 2wph_E 12 FCKNSADNKVVCSCTEGYR 30 (59)
T ss_dssp EEEECSTTCEEEECCTTEE
T ss_pred EeEeCCCCCEEeeCCCCcE
Confidence 4654 378999999995
No 136
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=59.86 E-value=0.8 Score=19.66 Aligned_cols=12 Identities=25% Similarity=0.642 Sum_probs=10.2
Q ss_pred CCCeEEeCCCcc
Q psy17083 41 SSWQCICDTNWG 52 (60)
Q Consensus 41 ~~~~C~C~~g~~ 52 (60)
+.+.|.|++||.
T Consensus 17 gs~~C~C~~Gy~ 28 (51)
T 1kig_L 17 SEVRCSCAHGYV 28 (51)
T ss_dssp TEECCCCCTTEE
T ss_pred CCeEEeCCCCcE
Confidence 668899999995
No 137
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=56.05 E-value=4.5 Score=20.74 Aligned_cols=24 Identities=25% Similarity=0.787 Sum_probs=17.4
Q ss_pred CCCCeEEc--CCCeEEeCCCcc----cCCCC
Q psy17083 33 CKHGYCNG--SSWQCICDTNWG----GILCD 57 (60)
Q Consensus 33 C~~g~C~~--~~~~C~C~~g~~----G~~C~ 57 (60)
|. ..|.+ +.+.|.|.+||. |..|+
T Consensus 128 C~-~~C~n~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 128 CS-HFCNNFIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp SS-SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred CC-CcccCcCCCEEEecCCCcEECCCCCccc
Confidence 54 36765 668999999997 55553
No 138
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=54.55 E-value=11 Score=24.20 Aligned_cols=27 Identities=41% Similarity=1.068 Sum_probs=19.5
Q ss_pred CCCCC-CCeEEc---CCCeEEeCCCccc--CCCC
Q psy17083 30 YPGCK-HGYCNG---SSWQCICDTNWGG--ILCD 57 (60)
Q Consensus 30 ~~~C~-~g~C~~---~~~~C~C~~g~~G--~~C~ 57 (60)
++ |. +..|+. +.+.|.|+.||.| ..|.
T Consensus 27 ~~-c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 27 SE-CHEHADCVLERDGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp CC-CCTTEEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred CC-CCCCCeeEeCCCCCEecCCCCCCCCCCcccC
Confidence 34 76 567875 5679999999976 4554
No 139
>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}
Probab=53.74 E-value=5.5 Score=21.33 Aligned_cols=25 Identities=28% Similarity=0.808 Sum_probs=13.9
Q ss_pred CeeEcCCCCcC--CCCCCCCCCCCCCC
Q psy17083 11 ASVQCRPGWRG--EFCDQCKPYPGCKH 35 (60)
Q Consensus 11 ~~C~C~~g~~g--~~C~~c~~~~~C~~ 35 (60)
-.|.|.+||+- ..|+.|.....|..
T Consensus 81 ~~C~C~~G~~~~~~~c~~C~~~~~C~p 107 (177)
T 3qd6_R 81 TICTCEEGWHCTSEACESCVLHRSCSP 107 (177)
T ss_dssp CEEEECTTEEESSSSCCCEEECCCC--
T ss_pred ceeecCCCcEECCCCCccccccCcCCC
Confidence 46889999863 44555544333443
No 140
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=53.54 E-value=7.6 Score=22.47 Aligned_cols=16 Identities=25% Similarity=0.924 Sum_probs=10.4
Q ss_pred eEEc--CCCeEEeCCCcc
Q psy17083 37 YCNG--SSWQCICDTNWG 52 (60)
Q Consensus 37 ~C~~--~~~~C~C~~g~~ 52 (60)
.|.+ +.+.|.|++||.
T Consensus 13 ~C~n~~g~~~C~C~~g~~ 30 (349)
T 3v64_C 13 GCTNSEGAFQCWCEAGYE 30 (349)
T ss_dssp EECCC---CCEECCTTEE
T ss_pred eeecCCCCeEEECCCCcc
Confidence 4544 678899999885
No 141
>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B
Probab=48.60 E-value=17 Score=20.19 Aligned_cols=43 Identities=19% Similarity=0.501 Sum_probs=24.2
Q ss_pred CeeEcCCCCcC-CCCCCCCCCCCCCCCeE-----Ec-CCCeEE-eCCCccc
Q psy17083 11 ASVQCRPGWRG-EFCDQCKPYPGCKHGYC-----NG-SSWQCI-CDTNWGG 53 (60)
Q Consensus 11 ~~C~C~~g~~g-~~C~~c~~~~~C~~g~C-----~~-~~~~C~-C~~g~~G 53 (60)
-.|.|.+||+- ..|+.|.....|..|.- .. ....|. |++|+..
T Consensus 109 tvC~C~~G~y~~~~c~~C~~cs~C~pG~~v~~~ct~~~Dt~C~~C~~GtFs 159 (216)
T 3me4_A 109 RRCACTAGYHWNSDCECCRRNTECAPGFGAQHPLQLNKDTVCTPCLLGFFS 159 (216)
T ss_dssp CEEEECTTEEEETTTTEEEECCCBCTTEEECSSEETTSCCCEEECCTTEEC
T ss_pred ccccCCCCeEccCCCcchhccccCCCCccccccCccCCCCccccCCCceec
Confidence 47889999752 34555543333655532 22 334675 8777653
No 142
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=44.74 E-value=28 Score=17.26 Aligned_cols=19 Identities=21% Similarity=0.419 Sum_probs=12.8
Q ss_pred CCeEEc---CCCeEEeCCCccc
Q psy17083 35 HGYCNG---SSWQCICDTNWGG 53 (60)
Q Consensus 35 ~g~C~~---~~~~C~C~~g~~G 53 (60)
+..|.. +...|+|.+||.+
T Consensus 15 NA~C~r~~~g~e~C~C~~gy~g 36 (99)
T 1ob1_C 15 NSGCFRHLDEREECKCLLNYKQ 36 (99)
T ss_dssp TEEEECCTTSCCEEEECTTEEE
T ss_pred CCCeEEcCCCCEEEEecCCeec
Confidence 445654 5568888888865
No 143
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=41.69 E-value=22 Score=19.11 Aligned_cols=41 Identities=22% Similarity=0.404 Sum_probs=21.4
Q ss_pred CeeEcCCCCcCCCCCCCCCCCCCCCCeEEc------CCCeEE-eCCCcc
Q psy17083 11 ASVQCRPGWRGEFCDQCKPYPGCKHGYCNG------SSWQCI-CDTNWG 52 (60)
Q Consensus 11 ~~C~C~~g~~g~~C~~c~~~~~C~~g~C~~------~~~~C~-C~~g~~ 52 (60)
-.|.|.+||+=. ++.|.....|..|.=+. ....|. |++|+.
T Consensus 84 tvC~C~~G~~~~-~~~C~~~s~C~pG~~v~~~~t~~~Dt~C~~C~~GtF 131 (176)
T 3k51_B 84 RACRCRTGFFAH-AGFCLEHASCPPGAGVIAPGTPSQNTQCQPCPPGTF 131 (176)
T ss_dssp CEEEECTTEEEE-TTEEEECCCCCTTEEEEECCCSSSCCEEEECCTTEE
T ss_pred ceeeccCCeeEC-CCcccccccCCCCcEEeecCcccCCCccccCCCCcc
Confidence 468888888632 33343333355443221 234565 777764
No 144
>3alq_R Tumor necrosis factor receptor superfamily member; ligand-receptor complex, cytokine, cytokine-cytokine recepto; 3.00A {Homo sapiens}
Probab=38.70 E-value=19 Score=19.06 Aligned_cols=43 Identities=33% Similarity=0.741 Sum_probs=23.2
Q ss_pred CeeEcCCCCcC-----CCCCCCCCCCCCCCCeEEc------CCCeEE-eCCCccc
Q psy17083 11 ASVQCRPGWRG-----EFCDQCKPYPGCKHGYCNG------SSWQCI-CDTNWGG 53 (60)
Q Consensus 11 ~~C~C~~g~~g-----~~C~~c~~~~~C~~g~C~~------~~~~C~-C~~g~~G 53 (60)
-.|.|.+||+- ..|..|.....|..|.=+. ....|. |+.|+..
T Consensus 84 ~~C~C~~G~y~~~~~~~~c~~C~~~~~C~~G~~v~~~~t~~~dt~C~~C~~Gtfs 138 (173)
T 3alq_R 84 RICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFS 138 (173)
T ss_dssp CEEEECTTEEEEEECSSSEEEEEECCCBCTTEEEEECCTTTSCCEEEECCTTEEC
T ss_pred CeeECCCCeEeccCCCCCCCcccccCcCCCCeeEecCCcCCCCCcccCCCCCeec
Confidence 46889998862 2344454333365553221 234564 7777643
No 145
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=38.26 E-value=22 Score=19.00 Aligned_cols=42 Identities=19% Similarity=0.401 Sum_probs=21.7
Q ss_pred CeeEcCCCCcCCCCCCCCCCCCCCCCeEEc------CCCeEE-eCCCccc
Q psy17083 11 ASVQCRPGWRGEFCDQCKPYPGCKHGYCNG------SSWQCI-CDTNWGG 53 (60)
Q Consensus 11 ~~C~C~~g~~g~~C~~c~~~~~C~~g~C~~------~~~~C~-C~~g~~G 53 (60)
-.|.|.+||+-. ++.|.....|..|.=+. ....|. |++|+..
T Consensus 82 tvC~C~~G~~~~-~~~C~~ct~C~~G~~v~~~~t~~~dt~C~~C~~Gtfs 130 (171)
T 3urf_Z 82 RVCECKEGRYLE-IEFCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFS 130 (171)
T ss_dssp CEEEECTTEEEE-TTEEEECCCBCTTEEEEECCCSSSCCEEEECCTTEEC
T ss_pred ccccCCCCcEEC-CccCcccCcCCCCceEeecCccCCCcccccCCCCccc
Confidence 468888888642 23343333355443211 234565 7777643
No 146
>2lkq_A Immunoglobulin lambda-like polypeptide 1; PRE-BCR, B cell development, immune system; NMR {Homo sapiens}
Probab=35.45 E-value=14 Score=13.42 Aligned_cols=8 Identities=38% Similarity=1.219 Sum_probs=4.9
Q ss_pred CCcCCCCC
Q psy17083 18 GWRGEFCD 25 (60)
Q Consensus 18 g~~g~~C~ 25 (60)
.|+|+.|.
T Consensus 18 swtgprc~ 25 (26)
T 2lkq_A 18 SWTGPRCX 25 (26)
T ss_dssp TCCCSCC-
T ss_pred CccCCCCC
Confidence 47777763
No 147
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=34.85 E-value=35 Score=17.08 Aligned_cols=20 Identities=10% Similarity=0.267 Sum_probs=13.8
Q ss_pred CCeEEc---CCCeEEeCCCcccC
Q psy17083 35 HGYCNG---SSWQCICDTNWGGI 54 (60)
Q Consensus 35 ~g~C~~---~~~~C~C~~g~~G~ 54 (60)
+..|.. +...|+|..+|.+.
T Consensus 21 NA~C~r~~~G~e~CrCl~gY~~d 43 (105)
T 1n1i_A 21 NAACYRYLDGTEEWRCLLGFKEV 43 (105)
T ss_dssp TEEEEECTTSCEEEEECTTEEEC
T ss_pred CCCeEECCCCCEeEEEECCeecc
Confidence 456654 55688999998753
No 148
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=31.55 E-value=13 Score=19.25 Aligned_cols=27 Identities=26% Similarity=0.636 Sum_probs=16.6
Q ss_pred CeeEcCCCCc------CCCCCCCCCCCCCCCCe
Q psy17083 11 ASVQCRPGWR------GEFCDQCKPYPGCKHGY 37 (60)
Q Consensus 11 ~~C~C~~g~~------g~~C~~c~~~~~C~~g~ 37 (60)
-.|.|.+||+ ...|+.|.....|..|.
T Consensus 79 tvC~C~~G~yc~~~~~~~~C~~C~~~t~C~pG~ 111 (142)
T 2uwi_A 79 RICHCDSNSYCLLKASDGNCVTCAPKTKCGRGY 111 (142)
T ss_dssp CEEEECTTEEEEEECTTSCEEEEEECCCCCTTE
T ss_pred CEeeCCCCcEecccCCCCCCCCCcCCCcCCcCE
Confidence 4788999987 23455565444466553
Done!