Query psy17084
Match_columns 721
No_of_seqs 521 out of 2731
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 21:27:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17084.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17084hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fbr_A Lectin, myxobacterial h 99.9 4.4E-31 1.5E-35 261.7 -15.8 247 378-714 5-266 (267)
2 4fbr_A Lectin, myxobacterial h 99.9 1.7E-29 5.7E-34 250.4 -17.7 252 277-636 5-265 (267)
3 1z1y_A Ookinete surface protei 99.9 2.1E-23 7.1E-28 202.0 4.7 146 570-718 9-176 (186)
4 2vj3_A Neurogenic locus notch 99.9 3.1E-22 1.1E-26 182.8 11.6 124 564-688 3-128 (135)
5 2vj3_A Neurogenic locus notch 99.9 1.5E-21 5.3E-26 178.1 12.0 122 173-306 2-125 (135)
6 1z1y_A Ookinete surface protei 99.8 7.1E-22 2.4E-26 191.2 5.0 147 509-678 9-175 (186)
7 4d90_A EGF-like repeat and dis 99.8 1.4E-19 4.8E-24 167.2 10.0 126 567-719 1-135 (143)
8 4d90_A EGF-like repeat and dis 99.8 3E-19 1E-23 165.0 9.9 105 547-677 21-132 (143)
9 2ygq_A WIF-1, WNT inhibitory f 99.8 8E-20 2.8E-24 191.1 6.6 162 506-719 149-310 (324)
10 2vj2_A Jagged-1; signalling, p 99.8 6.1E-20 2.1E-24 174.1 3.5 149 548-717 16-169 (169)
11 2ygq_A WIF-1, WNT inhibitory f 99.8 2.6E-19 9E-24 187.2 8.0 155 17-260 153-307 (324)
12 2vj2_A Jagged-1; signalling, p 99.7 3.5E-19 1.2E-23 168.8 3.2 149 486-677 15-168 (169)
13 3fcs_B Integrin beta-3; beta p 99.7 6.5E-18 2.2E-22 191.6 10.9 172 507-716 436-627 (690)
14 1uzk_A Fibrillin-1; glycoprote 99.7 1.2E-18 4.1E-23 164.4 -0.2 137 8-209 1-156 (162)
15 3fcs_B Integrin beta-3; beta p 99.7 2.5E-17 8.4E-22 186.9 9.6 168 12-260 436-627 (690)
16 2gy5_A Angiopoietin-1 receptor 99.6 2.1E-16 7E-21 171.0 10.2 157 488-677 185-349 (423)
17 2bou_A EGF-like module contain 99.6 1.9E-16 6.4E-21 146.0 6.4 122 117-260 7-133 (143)
18 1uzk_A Fibrillin-1; glycoprote 99.6 1.9E-17 6.4E-22 156.2 -1.5 133 565-714 2-156 (162)
19 1yo8_A Thrombospondin-2; EGF, 99.6 9.3E-16 3.2E-20 171.3 10.7 139 565-709 2-176 (634)
20 2bou_A EGF-like module contain 99.6 4.9E-16 1.7E-20 143.2 5.5 114 572-717 7-134 (143)
21 1yo8_A Thrombospondin-2; EGF, 99.6 2.6E-15 9E-20 167.7 12.3 138 175-330 2-177 (634)
22 2gy5_A Angiopoietin-1 receptor 99.6 4.2E-15 1.4E-19 160.8 11.0 199 484-718 135-351 (423)
23 3k6s_B Integrin beta-2; cell r 99.6 4.1E-15 1.4E-19 168.1 9.2 155 509-696 433-607 (687)
24 1dx5_I Thrombomodulin; serine 99.5 2.4E-15 8.2E-20 133.3 4.2 103 603-714 3-112 (118)
25 4aqs_A Laminin subunit beta-1; 99.5 3.7E-15 1.3E-19 167.4 6.2 240 281-601 275-524 (525)
26 2w86_A Fibrillin-1, fibrillin1 99.5 6.6E-16 2.3E-20 143.0 -0.9 128 564-714 2-141 (147)
27 4aqs_A Laminin subunit beta-1; 99.5 5.2E-15 1.8E-19 166.2 4.1 245 189-540 271-524 (525)
28 1dx5_I Thrombomodulin; serine 99.5 5.2E-15 1.8E-19 131.1 2.3 102 564-675 2-112 (118)
29 2w86_A Fibrillin-1, fibrillin1 99.5 1E-15 3.4E-20 141.8 -2.8 135 503-675 2-141 (147)
30 1tpg_A T-plasminogen activator 99.5 2.8E-14 9.6E-19 119.8 5.7 85 549-643 2-89 (91)
31 1tpg_A T-plasminogen activator 99.5 3.2E-14 1.1E-18 119.4 4.9 82 586-677 1-85 (91)
32 3k6s_B Integrin beta-2; cell r 99.4 7E-14 2.4E-18 158.1 6.1 132 570-717 433-592 (687)
33 1emn_A Fibrillin; extracellula 99.3 1.1E-12 3.8E-17 107.8 5.8 72 7-82 2-76 (82)
34 1klo_A Laminin; glycoprotein; 99.3 8.9E-13 3E-17 123.4 3.7 136 346-562 2-156 (162)
35 1x7a_L Coagulation factor IX, 99.2 2.5E-12 8.6E-17 118.0 4.3 80 3-85 41-125 (146)
36 1klo_A Laminin; glycoprotein; 99.2 2.1E-12 7.3E-17 120.8 3.7 125 410-601 2-145 (162)
37 1emn_A Fibrillin; extracellula 99.2 3.9E-12 1.3E-16 104.6 4.8 73 172-258 1-77 (82)
38 1z6c_A Vitamin K-dependent pro 99.2 2.5E-12 8.7E-17 107.0 2.9 81 175-267 2-84 (87)
39 1lmj_A Fibrillin 1; EGF, calci 99.2 4.1E-12 1.4E-16 105.5 3.6 70 8-82 1-79 (86)
40 1aut_L Activated protein C; se 99.2 9E-12 3.1E-16 109.5 5.9 74 7-82 3-86 (114)
41 1nfu_B Coagulation factor XA, 99.2 2.4E-12 8.3E-17 123.0 1.4 80 2-85 34-120 (195)
42 1z6c_A Vitamin K-dependent pro 99.2 7.4E-12 2.5E-16 104.2 3.4 71 8-85 1-77 (87)
43 2vh0_B Activated factor XA lig 99.2 4E-12 1.4E-16 115.1 1.4 79 3-85 35-120 (134)
44 2c4f_L Coagulation factor VII 99.2 2.4E-11 8.4E-16 111.1 6.1 79 564-642 45-131 (142)
45 2c4f_L Coagulation factor VII 99.2 2.3E-11 7.8E-16 111.3 5.9 88 602-689 45-140 (142)
46 1aut_L Activated protein C; se 99.1 3.5E-11 1.2E-15 105.7 6.0 88 565-658 5-108 (114)
47 1lmj_A Fibrillin 1; EGF, calci 99.1 2.7E-11 9.1E-16 100.6 3.8 70 641-714 2-80 (86)
48 1x7a_L Coagulation factor IX, 99.1 1.3E-10 4.4E-15 106.6 6.6 72 603-677 47-125 (146)
49 2vh0_B Activated factor XA lig 99.0 4.7E-11 1.6E-15 108.0 2.2 68 565-634 41-111 (134)
50 1nfu_B Coagulation factor XA, 99.0 6.9E-11 2.4E-15 112.9 2.2 84 564-653 40-130 (195)
51 2w2n_E LDL receptor, low-densi 99.0 1.6E-10 5.4E-15 99.8 2.5 77 630-714 19-101 (107)
52 3h5c_B Vitamin K-dependent pro 98.9 1.1E-09 3.8E-14 114.8 6.1 71 8-82 3-76 (317)
53 2p28_B Integrin beta-2; hybrid 98.9 7.4E-10 2.5E-14 107.9 4.2 95 571-677 95-213 (217)
54 2w2n_E LDL receptor, low-densi 98.8 1.2E-09 4E-14 94.4 3.1 75 593-674 20-100 (107)
55 2p28_B Integrin beta-2; hybrid 98.8 1.6E-09 5.5E-14 105.5 3.9 97 610-719 96-216 (217)
56 1n7d_A LDL receptor, low-densi 98.8 1.7E-08 5.7E-13 117.3 12.0 170 18-257 182-365 (699)
57 3u7u_G Neuregulin 1; signaling 98.7 4.8E-09 1.6E-13 77.6 3.7 46 559-604 1-51 (55)
58 3u7u_G Neuregulin 1; signaling 98.7 8.7E-09 3E-13 76.2 3.4 43 43-85 1-48 (55)
59 3h5c_B Vitamin K-dependent pro 98.7 1.4E-08 4.9E-13 106.3 6.5 70 603-674 4-76 (317)
60 1n7d_A LDL receptor, low-densi 98.6 6E-08 2.1E-12 112.6 10.5 132 573-713 221-365 (699)
61 3m0c_C LDL receptor, low-densi 98.6 5.3E-08 1.8E-12 113.8 7.3 119 161-295 255-382 (791)
62 1edm_B Factor IX; epidermal gr 98.5 8.3E-08 2.8E-12 66.2 4.2 38 8-47 1-38 (39)
63 3m0c_C LDL receptor, low-densi 98.5 8.5E-08 2.9E-12 112.1 6.2 132 573-713 239-383 (791)
64 1edm_B Factor IX; epidermal gr 98.4 1.9E-07 6.6E-12 64.3 4.5 37 680-716 2-38 (39)
65 2k2s_B Micronemal protein 6; m 98.3 7.3E-08 2.5E-12 72.9 0.4 43 4-48 5-50 (61)
66 1egf_A Epidermal growth factor 98.3 6.1E-07 2.1E-11 66.3 4.6 42 9-52 2-48 (53)
67 3v65_B Low-density lipoprotein 98.3 1.4E-07 4.8E-12 101.6 1.0 76 175-260 2-82 (386)
68 3v65_B Low-density lipoprotein 98.2 1.6E-07 5.4E-12 101.2 0.8 73 8-85 1-82 (386)
69 3p5b_L Low density lipoprotein 98.2 4.9E-07 1.7E-11 97.8 4.7 67 11-82 1-71 (400)
70 3p5b_L Low density lipoprotein 98.2 5.8E-07 2E-11 97.2 4.7 67 605-674 1-71 (400)
71 1a3p_A Epidermal growth factor 98.2 1.3E-06 4.5E-11 62.1 3.9 39 12-51 2-44 (45)
72 1a3p_A Epidermal growth factor 98.1 2.7E-06 9.3E-11 60.4 3.8 30 573-602 10-41 (45)
73 1hae_A Heregulin-alpha; growth 98.0 1.3E-06 4.5E-11 67.2 2.1 46 9-55 5-54 (63)
74 1egf_A Epidermal growth factor 98.0 4.6E-06 1.6E-10 61.6 4.9 41 224-264 2-47 (53)
75 2k2s_B Micronemal protein 6; m 98.0 1E-06 3.5E-11 66.6 0.8 39 222-260 8-49 (61)
76 2wg3_C Hedgehog-interacting pr 98.0 7.9E-07 2.7E-11 97.5 -0.1 77 589-678 379-455 (463)
77 2wg3_C Hedgehog-interacting pr 98.0 7.8E-07 2.7E-11 97.5 -0.5 80 626-719 378-457 (463)
78 3ca7_A Protein spitz; argos, E 97.9 1.1E-06 3.7E-11 64.7 -0.4 41 33-85 3-47 (52)
79 1k36_A Epiregulin; EGF-like fo 97.9 7.3E-06 2.5E-10 58.3 3.3 36 49-85 2-42 (46)
80 1hae_A Heregulin-alpha; growth 97.9 5.8E-06 2E-10 63.5 2.8 44 403-446 6-54 (63)
81 3ca7_A Protein spitz; argos, E 97.9 9.3E-07 3.2E-11 65.0 -1.7 16 662-677 32-47 (52)
82 1k36_A Epiregulin; EGF-like fo 97.8 1.2E-05 4.2E-10 57.1 3.2 38 680-718 2-44 (46)
83 3zyj_B Netrin-G1; cell adhesio 97.8 6.1E-06 2.1E-10 87.4 2.3 118 574-709 299-419 (426)
84 3zyj_B Netrin-G1; cell adhesio 97.6 1.9E-05 6.7E-10 83.6 3.4 112 233-358 299-412 (426)
85 1nql_B Epidermal growth factor 97.4 5.5E-05 1.9E-09 55.5 1.9 33 17-50 12-46 (53)
86 1nql_B Epidermal growth factor 97.3 8.9E-05 3E-09 54.4 2.4 32 54-85 10-43 (53)
87 2jkh_L Factor X light chain; p 97.3 6.8E-05 2.3E-09 55.7 1.8 43 177-229 2-46 (55)
88 2fd6_A Urokinase-type plasmino 97.2 0.00019 6.6E-09 62.9 4.1 59 18-85 2-62 (122)
89 1kli_L Factor VIIA; extrinsic 97.1 0.00016 5.3E-09 56.3 1.9 48 174-229 3-51 (69)
90 1apq_A Complement protease C1R 97.1 0.00027 9.3E-09 51.9 2.9 33 175-209 3-45 (53)
91 2fd6_A Urokinase-type plasmino 97.0 0.00055 1.9E-08 60.0 4.9 59 410-503 2-63 (122)
92 1ob1_C Major merozoite surface 97.0 0.00046 1.6E-08 56.6 3.7 70 645-714 7-86 (99)
93 1apq_A Complement protease C1R 97.0 0.00058 2E-08 50.1 3.8 34 679-714 2-45 (53)
94 1n1i_A Merozoite surface prote 96.7 0.0022 7.6E-08 52.9 5.6 69 644-712 12-85 (105)
95 2kl7_A Fibulin-4; secreted, ca 96.7 0.001 3.5E-08 52.0 3.5 33 175-207 2-37 (71)
96 1kig_L Factor XA; glycoprotein 96.6 0.0006 2.1E-08 49.5 1.4 33 188-228 10-42 (51)
97 2kl7_A Fibulin-4; secreted, ca 96.5 0.0013 4.3E-08 51.5 3.0 60 641-713 2-64 (71)
98 3ltf_D Protein spitz; receptor 96.5 0.0011 3.7E-08 49.6 2.2 29 57-85 15-47 (58)
99 1ob1_C Major merozoite surface 96.5 0.0033 1.1E-07 51.6 5.0 68 12-80 6-83 (99)
100 1g1s_A P-selectin; selectin, l 96.3 0.0013 4.5E-08 60.9 2.2 35 607-641 122-156 (162)
101 1g1s_A P-selectin; selectin, l 96.3 0.0014 4.8E-08 60.7 2.4 42 567-609 120-161 (162)
102 4aqt_A Laminin subunit gamma-1 96.3 0.0023 8E-08 67.2 4.2 26 526-562 334-360 (375)
103 1gl4_A Nidogen-1, entactin; im 96.2 0.00073 2.5E-08 67.4 -0.2 43 175-227 4-48 (285)
104 2bz6_L Blood coagulation facto 96.2 0.0014 4.9E-08 47.9 1.4 35 187-229 10-45 (53)
105 4aqt_A Laminin subunit gamma-1 96.2 0.004 1.4E-07 65.4 5.2 26 360-399 334-360 (375)
106 1n1i_A Merozoite surface prote 96.1 0.0087 3E-07 49.3 5.7 67 179-255 13-84 (105)
107 3ltf_D Protein spitz; receptor 96.1 0.0024 8.1E-08 47.7 2.1 31 688-718 15-49 (58)
108 2y38_A Laminin subunit alpha-5 96.0 0.017 5.8E-07 60.9 8.8 77 285-400 286-384 (403)
109 2y38_A Laminin subunit alpha-5 96.0 0.01 3.5E-07 62.6 7.1 28 524-562 355-383 (403)
110 2i9a_A Urokinase-type plasmino 95.9 0.0053 1.8E-07 55.3 4.2 59 17-85 13-74 (145)
111 2jkh_L Factor X light chain; p 95.9 0.0033 1.1E-07 46.4 2.2 39 226-267 2-46 (55)
112 3nt1_A Prostaglandin-endoperox 95.9 0.0031 1.1E-07 70.1 3.0 35 51-85 2-38 (587)
113 1kli_L Factor VIIA; extrinsic 95.3 0.0087 3E-07 46.3 2.6 41 223-266 3-50 (69)
114 1q4g_A Prostaglandin G/H synth 95.3 0.0077 2.6E-07 66.9 3.2 36 50-85 2-39 (553)
115 1q4g_A Prostaglandin G/H synth 95.1 0.009 3.1E-07 66.3 3.2 38 604-641 2-41 (553)
116 1gl4_A Nidogen-1, entactin; im 95.1 0.0051 1.8E-07 61.3 1.0 41 224-265 4-48 (285)
117 2i9a_A Urokinase-type plasmino 95.0 0.026 8.9E-07 50.8 5.2 33 410-442 14-49 (145)
118 3nt1_A Prostaglandin-endoperox 94.9 0.014 4.6E-07 65.0 3.9 37 10-47 1-38 (587)
119 1iox_A Betacellulin; EGF-like 94.0 0.029 9.9E-07 40.2 2.5 30 55-85 13-44 (50)
120 2wph_E Coagulation factor IXA 93.9 0.023 7.9E-07 42.4 2.0 42 187-241 10-52 (59)
121 3cfw_A L-selectin; EGF, cell a 93.7 0.037 1.3E-06 51.0 3.4 35 51-85 120-154 (164)
122 1g1t_A E-selectin; EGF, adhesi 93.6 0.022 7.5E-07 52.1 1.6 35 568-602 121-155 (157)
123 1g1t_A E-selectin; EGF, adhesi 93.5 0.024 8.3E-07 51.8 1.8 35 51-85 120-154 (157)
124 1iox_A Betacellulin; EGF-like 93.3 0.034 1.2E-06 39.9 1.9 16 662-677 29-44 (50)
125 3e50_C Protransforming growth 93.2 0.056 1.9E-06 38.6 2.9 28 649-677 15-44 (50)
126 1szb_A Mannose binding lectin- 93.2 0.029 1E-06 52.1 1.9 40 39-80 113-157 (170)
127 2p26_A Integrin beta-2; hybrid 93.2 0.045 1.5E-06 54.9 3.3 59 573-639 197-274 (280)
128 1xdt_R Hbegf, heparin-binding 93.2 0.037 1.3E-06 43.5 2.1 34 51-85 38-76 (79)
129 3e50_C Protransforming growth 93.2 0.063 2.2E-06 38.3 3.1 30 55-85 13-44 (50)
130 3cfw_A L-selectin; EGF, cell a 93.2 0.049 1.7E-06 50.2 3.3 39 228-267 122-160 (164)
131 2rnl_A Amphiregulin; AR, color 93.2 0.077 2.6E-06 37.9 3.5 29 56-85 18-48 (50)
132 1szb_A Mannose binding lectin- 93.1 0.042 1.4E-06 51.0 2.8 36 171-208 119-159 (170)
133 2rnl_A Amphiregulin; AR, color 92.6 0.15 5.1E-06 36.4 4.4 30 687-717 18-49 (50)
134 1kig_L Factor XA; glycoprotein 91.5 0.069 2.4E-06 38.5 1.6 20 693-712 10-29 (51)
135 1xdt_R Hbegf, heparin-binding 91.5 0.077 2.6E-06 41.7 1.9 36 681-717 37-77 (79)
136 2bz6_L Blood coagulation facto 91.1 0.1 3.5E-06 37.9 2.2 29 237-266 11-44 (53)
137 1b9w_A Protein (merozoite surf 90.9 0.4 1.4E-05 38.4 5.6 69 645-713 7-81 (95)
138 2p26_A Integrin beta-2; hybrid 90.1 0.16 5.4E-06 50.9 3.3 60 650-717 198-275 (280)
139 3asi_A Neurexin-1-alpha; beta- 89.8 0.23 7.7E-06 53.2 4.5 42 44-85 179-221 (410)
140 3asi_A Neurexin-1-alpha; beta- 89.3 0.26 9E-06 52.7 4.6 42 561-602 180-222 (410)
141 2ygo_A WIF-1, WNT inhibitory f 89.0 0.26 9E-06 45.6 3.6 32 303-337 149-180 (188)
142 2ygo_A WIF-1, WNT inhibitory f 88.9 0.24 8.3E-06 45.8 3.3 30 644-677 150-179 (188)
143 1nzi_A Complement C1S componen 86.7 0.41 1.4E-05 43.5 3.5 36 171-208 112-150 (159)
144 2wph_E Coagulation factor IXA 86.2 0.36 1.2E-05 35.8 2.3 20 693-712 11-31 (59)
145 3qcw_A Neurexin-1-alpha; synap 84.2 0.6 2.1E-05 57.4 4.3 43 562-604 1013-1056(1245)
146 3f1s_B Vitamin K-dependent pro 82.8 0.51 1.8E-05 47.5 2.4 46 176-229 2-48 (283)
147 1nzi_A Complement C1S componen 82.4 0.55 1.9E-05 42.6 2.3 40 39-80 106-148 (159)
148 2e26_A Reelin, reeler protein; 82.3 0.3 1E-05 54.8 0.4 44 36-85 521-564 (725)
149 3qcw_A Neurexin-1-alpha; synap 81.9 1 3.4E-05 55.5 4.9 41 45-85 1012-1053(1245)
150 2e26_A Reelin, reeler protein; 81.1 0.33 1.1E-05 54.4 0.3 44 628-677 521-564 (725)
151 3v64_C Agrin; beta propeller, 76.4 0.76 2.6E-05 47.8 1.3 32 176-208 1-32 (349)
152 1b9w_A Protein (merozoite surf 73.0 12 0.0004 30.1 6.9 72 606-677 6-89 (95)
153 3fl7_A Ephrin receptor; ATP-bi 58.4 5.7 0.00019 43.7 3.5 69 513-599 252-322 (536)
154 3fl7_A Ephrin receptor; ATP-bi 56.3 5.7 0.0002 43.7 3.1 69 58-145 252-322 (536)
155 3v64_C Agrin; beta propeller, 55.2 3.8 0.00013 42.3 1.4 29 50-80 1-30 (349)
156 3f1s_B Vitamin K-dependent pro 49.4 6.6 0.00022 39.2 2.0 31 50-80 2-33 (283)
157 3t5o_A Complement component C6 39.3 24 0.00084 41.5 5.1 48 566-615 497-544 (913)
158 3fby_A COMP, cartilage oligome 38.5 15 0.00052 39.7 2.8 27 687-713 27-54 (551)
159 3t5o_A Complement component C6 38.3 22 0.00076 41.9 4.5 28 546-575 515-542 (913)
160 3sov_A LRP-6, low-density lipo 36.8 24 0.00081 35.7 3.9 23 187-209 278-302 (318)
161 3fby_A COMP, cartilage oligome 34.1 23 0.00078 38.4 3.3 39 9-47 17-59 (551)
162 4a0p_A LRP6, LRP-6, low-densit 33.6 18 0.00062 40.6 2.6 35 175-209 264-299 (628)
163 1ijq_A LDL receptor, low-densi 32.7 23 0.00078 35.7 3.0 34 175-208 266-308 (316)
164 4a0p_A LRP6, LRP-6, low-densit 28.2 28 0.00095 39.1 2.9 32 681-712 265-297 (628)
165 1ijq_A LDL receptor, low-densi 27.2 36 0.0012 34.1 3.4 31 681-713 267-308 (316)
166 3sov_A LRP-6, low-density lipo 22.6 50 0.0017 33.2 3.4 31 682-712 268-300 (318)
No 1
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.94 E-value=4.4e-31 Score=261.69 Aligned_cols=247 Identities=15% Similarity=0.146 Sum_probs=192.7
Q ss_pred eeeccCCccccccCCC---CCCCCCCcCCCCCCCCCCCCCCEEeeCCCceEEecCCCccCCCCcccCcc------cCCCC
Q psy17084 378 TCVNTGDLYSCICKEG---FEGPDCGQDINDCSPQPCYNGGKCVDGVNWFLCECAPGFAGPDCRININE------CASNP 448 (721)
Q Consensus 378 ~C~~~~~~~~C~C~~G---~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~------C~~~~ 448 (721)
++.|..+.+++.+.+| |.|..+++++..+.. +|.++|+|++..++|+|+|++||+|++|+++|++ |...|
T Consensus 5 ~~~n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~~-~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~p 83 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPGGLWLIGARDKQNVVALDI-KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAP 83 (267)
T ss_dssp EEEEECSSTTSCCEEEEEEECCCCSSCCEEEEEE-ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSC
T ss_pred eEeecCCcccCCcCCCCceeeccccccccccCCC-CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCc
Confidence 3556777888888888 677777777766554 7889999999999999999999999999999999 55555
Q ss_pred CCCCceeeccCCCCCCCCccccCCCccccceeeecCCCceEeccCCCCCCCcccccCCCCCCCCCCCCCEEecCCCCeee
Q psy17084 449 CGYGKEILTVQSRSRSPAYLCVSNPAYLVARCVSQSGGSFKCSCDAGFSGKYCHENINDCKHNPCQNGGTCVDKVNSFQC 528 (721)
Q Consensus 449 C~~g~~~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C 528 (721)
|.++ ++| |.|..|+. +++|.+.||.++|+|++..++|+|
T Consensus 84 C~ng-----------------------------------gtc-----~~G~~c~~-~~eC~s~pC~ngG~C~~~~~sy~C 122 (267)
T 4fbr_A 84 WQPG-----------------------------------GVW-----VLGARDKQ-NIVAVSIKSNDGGKTLTGTTTYNG 122 (267)
T ss_dssp EEEE-----------------------------------EEE-----ECCCCSSC-CEEEEEEECSSTTSEEEEEEEETT
T ss_pred ccCC-----------------------------------Cee-----eccCcccc-ccccCCCCCCCCCEEecCCccEEe
Confidence 5544 232 46777764 468999999999999999999888
Q ss_pred ecCCCcccccccCCCCCCCCceeeCCCCccCCccccCCCC------CCCCCCCCCCEEeecCCCeEEeccCCCccCcccc
Q psy17084 529 ICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYCHENIND------CKHNPCQNGGTCVDKVNSFQCICRDGWEGEICAN 602 (721)
Q Consensus 529 ~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C~~~~~~------C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~ 602 (721)
.|++||+|..|+. ++++ |...||.++++| |.|.+|+.
T Consensus 123 ~C~~Gf~G~~Ce~-----------------------~~d~C~n~~~c~s~pC~ngg~c--------------~~G~~c~~ 165 (267)
T 4fbr_A 123 EGPIGFKSEVTDG-----------------------DTYSVENQWGGSAAPWHSGGVW--------------VLGTRGKQ 165 (267)
T ss_dssp SCCEEEEEEECCC-----------------------CEEEEEEECSSTTSCCEEEEEE--------------ECCSSTTS
T ss_pred eCCCCccccCCCC-----------------------CcccccccCCcCCccccCCcce--------------eccccccc
Confidence 8888888776654 4555 444556555444 34677776
Q ss_pred cCCCCCCCCCCCCcEEeeCCCCeEEecCCCCccccccCCCCCCCCCCCCCCCeeeecCCCceeeCCCCCCCCccccCccC
Q psy17084 603 NKNECEPNPCKNNGTCIDGHADFTCLCKNGWKGKTCTSKNGHCDRGTCKHGGTCADLGSSFFCHCPPDWEGTSCHIGKLN 682 (721)
Q Consensus 603 ~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~ 682 (721)
.++ +...||.++|+|++..++|+|+|++||+|.+|+.+++++...+....+.|++. +.+.+.|+.++.+..++.
T Consensus 166 ~i~-c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~g-G~~~~~C~~g~n~~~c~~---- 239 (267)
T 4fbr_A 166 NVI-NVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPG-GFWMIGARNGQNVVALNV---- 239 (267)
T ss_dssp CEE-EEEEECSSTTSEEEEEEEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEE-EEEECCCCTTCCEEEEEE----
T ss_pred ccc-cCCCCCCCCCEeeCCCCCeEEeCCCCccccccccccceeccCCCccCCcccCC-CeEEEecCCCCccccCCc----
Confidence 653 66778999999999999999999999999999999888654444444445443 345677999988777662
Q ss_pred CCCCCCCCCCCeEeeCCCceeeecCCCCccCC
Q psy17084 683 ACKSNPCKNGGTCVNTGDLYSCICKEGFVHAL 714 (721)
Q Consensus 683 ~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~ 714 (721)
||.++++|++...+|.|+||+||+|.+
T Consensus 240 -----~c~ngGtC~dg~~sy~CeCp~GF~G~~ 266 (267)
T 4fbr_A 240 -----ASSDGGKTLAGTMIYNGEGPIGFRARL 266 (267)
T ss_dssp -----ECSSTTSEEEEEEEETTSCCEEEEEEE
T ss_pred -----CCCCCCEeeCCCcceeecCCCCccccC
Confidence 788999999999999999999999864
No 2
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.92 E-value=1.7e-29 Score=250.40 Aligned_cols=252 Identities=14% Similarity=0.146 Sum_probs=179.3
Q ss_pred ceEecCCCcEEeCCCC---CccCCCCcCCCCCCCCCCCCCEEeeCCCCeeeecCCCCcCCCcccCCCc------cCCCCC
Q psy17084 277 GCTNLVGDYRCNCSPG---WTGHNCDVNINDCVGQCRHGSTCIDLVNDFHCACLPGYTGRTCQTDIND------CESSPC 347 (721)
Q Consensus 277 ~C~~~~g~~~C~C~~G---~~G~~C~~~~~~c~~~C~~~~~C~~~~~~~~C~C~~Gy~G~~C~~~~~~------C~~~~C 347 (721)
.+.|..|.|++.+.+| |.|.+++..+..+..+|.++++|++..++|+|.|++||+|..|++++++ |.+.||
T Consensus 5 ~~~n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC 84 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPGGLWLIGARDKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPW 84 (267)
T ss_dssp EEEEECSSTTSCCEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCE
T ss_pred eEeecCCcccCCcCCCCceeeccccccccccCCCCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcc
Confidence 4567788888888888 6788888777777678999999999999999999999999999999998 555566
Q ss_pred CCCCEEeeCCCCceEecCCCCcCCccCCCCeeeccCCccccccCCCCCCCCCCcCCCCCCCCCCCCCCEEeeCCCceEEe
Q psy17084 348 VNGGECVDQVNGFRCICPVGFAGQLCENGGTCVNTGDLYSCICKEGFEGPDCGQDINDCSPQPCYNGGKCVDGVNWFLCE 427 (721)
Q Consensus 348 ~~~g~C~~~~~~~~C~C~~gy~g~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~ 427 (721)
.++++|+ . |..|+ .+++|.+.||.++++|++...+|+|+
T Consensus 85 ~nggtc~--------------~--------------------------G~~c~-~~~eC~s~pC~ngG~C~~~~~sy~C~ 123 (267)
T 4fbr_A 85 QPGGVWV--------------L--------------------------GARDK-QNIVAVSIKSNDGGKTLTGTTTYNGE 123 (267)
T ss_dssp EEEEEEE--------------C--------------------------CCCSS-CCEEEEEEECSSTTSEEEEEEEETTS
T ss_pred cCCCeee--------------c--------------------------cCccc-cccccCCCCCCCCCEEecCCccEEee
Confidence 5555442 2 23333 34578889999999999999999999
Q ss_pred cCCCccCCCCcccCcccCCCCCCCCceeeccCCCCCCCCccccCCCccccceeeecCCCceEeccCCCCCCCcccccCCC
Q psy17084 428 CAPGFAGPDCRININECASNPCGYGKEILTVQSRSRSPAYLCVSNPAYLVARCVSQSGGSFKCSCDAGFSGKYCHENIND 507 (721)
Q Consensus 428 C~~Gy~G~~C~~~~~~C~~~~C~~g~~~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~~~~C~C~~G~~G~~C~~~~~~ 507 (721)
|++||+|..|++++++|...++... +.|.+ +..+|.|.+|+++|+
T Consensus 124 C~~Gf~G~~Ce~~~d~C~n~~~c~s-------------------------~pC~n---------gg~c~~G~~c~~~i~- 168 (267)
T 4fbr_A 124 GPIGFKSEVTDGDTYSVENQWGGSA-------------------------APWHS---------GGVWVLGTRGKQNVI- 168 (267)
T ss_dssp CCEEEEEEECCCCEEEEEEECSSTT-------------------------SCCEE---------EEEEECCSSTTSCEE-
T ss_pred CCCCccccCCCCCcccccccCCcCC-------------------------ccccC---------Ccceecccccccccc-
Confidence 9999999999999998765443322 11111 111234666766553
Q ss_pred CCCCCCCCCCEEecCCCCeeeecCCCcccccccCCCCCCCCceeeCCCCccCCccccCCCCCCCCCCCCCCEEeecCCCe
Q psy17084 508 CKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYCHENINDCKHNPCQNGGTCVDKVNSF 587 (721)
Q Consensus 508 C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~ 587 (721)
+.+.||.++|+|++..++|+|.|++||+|..|+. ++++++..+....+.|.+. +.+
T Consensus 169 c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~-----------------------~i~ec~~~~~c~~~~c~~g-G~~ 224 (267)
T 4fbr_A 169 NVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSP-----------------------DTYTVENQWGGSTAPWNPG-GFW 224 (267)
T ss_dssp EEEEECSSTTSEEEEEEEETTSCCEEEEEEEEET-----------------------TEEEEEEECSCTTSCCEEE-EEE
T ss_pred cCCCCCCCCCEeeCCCCCeEEeCCCCcccccccc-----------------------ccceeccCCCccCCcccCC-CeE
Confidence 5567888888888888887777777777665543 4444322222222233322 234
Q ss_pred EEeccCCCccCcccccCCCCCCCCCCCCcEEeeCCCCeEEecCCCCccc
Q psy17084 588 QCICRDGWEGEICANNKNECEPNPCKNNGTCIDGHADFTCLCKNGWKGK 636 (721)
Q Consensus 588 ~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~ 636 (721)
.+.|++++.+..++. ||.++|+|++...+|+|+|++||+|+
T Consensus 225 ~~~C~~g~n~~~c~~--------~c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 225 MIGARNGQNVVALNV--------ASSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp ECCCCTTCCEEEEEE--------ECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred EEecCCCCccccCCc--------CCCCCCEeeCCCcceeecCCCCcccc
Confidence 555777777666542 57788888888788888888888875
No 3
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.87 E-value=2.1e-23 Score=201.96 Aligned_cols=146 Identities=27% Similarity=0.597 Sum_probs=129.6
Q ss_pred CCCCCCCCCEEeecCCCeEEeccCCCccC---cccccCCCCC----CCCCCCCcEEeeCC-----CCeEEecCCCCcccc
Q psy17084 570 KHNPCQNGGTCVDKVNSFQCICRDGWEGE---ICANNKNECE----PNPCKNNGTCIDGH-----ADFTCLCKNGWKGKT 637 (721)
Q Consensus 570 ~~~~C~~~g~C~~~~~~~~C~C~~G~~G~---~C~~~~~~C~----~~~C~~~g~C~~~~-----~~~~C~C~~G~~G~~ 637 (721)
..+||.+ ++|++..++|+|+|++||+|. .|+ ++++|. .+||.++++|++.. ++|+|+|++||+|..
T Consensus 9 ~~~pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~ 86 (186)
T 1z1y_A 9 VDTICXN-GQLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE 86 (186)
T ss_dssp TTCCCBT-EEEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET
T ss_pred CCCCCCC-CEeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC
Confidence 4678985 599999999999999999988 886 689998 78999999999998 899999999999985
Q ss_pred ccCCCCCCCCCCCCCCCeee----ecCCCceeeCCCCCCC-----CccccCccCCCCCCCC-CCCCeEeeCCCceeeecC
Q psy17084 638 CTSKNGHCDRGTCKHGGTCA----DLGSSFFCHCPPDWEG-----TSCHIGKLNACKSNPC-KNGGTCVNTGDLYSCICK 707 (721)
Q Consensus 638 C~~~~~~C~~~~C~~~~~C~----~~~~~~~C~C~~G~~G-----~~C~~~~~~~C~~~~C-~~~~~C~~~~~~~~C~C~ 707 (721)
++-.+++|...+|.++++|+ ++.++|+|+|++||+| ..|+..++++|. ++| .++++|+++.++|+|+|+
T Consensus 87 ~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~-~~C~~~~~~C~n~~g~y~C~C~ 165 (186)
T 1z1y_A 87 DTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ-LXCNTDNEVCXNVEGVYXCQCM 165 (186)
T ss_dssp TEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC-CCCCTTTEEEEEETTEEEEEEC
T ss_pred CCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc-ccccccCcceecCCCCeeeECC
Confidence 54347899999999999999 7888999999999998 778854468997 499 899999999999999999
Q ss_pred CCCccCCcccC
Q psy17084 708 EGFVHALLFTR 718 (721)
Q Consensus 708 ~G~~g~~c~~~ 718 (721)
+||+|+.++..
T Consensus 166 ~G~~g~~~~~~ 176 (186)
T 1z1y_A 166 EGFTFDXEXNV 176 (186)
T ss_dssp TTCEEETTTTE
T ss_pred CCCccCccccc
Confidence 99999987754
No 4
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.87 E-value=3.1e-22 Score=182.76 Aligned_cols=124 Identities=34% Similarity=0.955 Sum_probs=111.9
Q ss_pred cCCCCCC--CCCCCCCCEEeecCCCeEEeccCCCccCcccccCCCCCCCCCCCCcEEeeCCCCeEEecCCCCccccccCC
Q psy17084 564 ENINDCK--HNPCQNGGTCVDKVNSFQCICRDGWEGEICANNKNECEPNPCKNNGTCIDGHADFTCLCKNGWKGKTCTSK 641 (721)
Q Consensus 564 ~~~~~C~--~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~ 641 (721)
.++++|+ .+||.++|+|++..++|+|+|++||+|..|+.++++|..+||.++++|++..++|+|+|++||+|..|+.+
T Consensus 3 ~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~ 82 (135)
T 2vj3_A 3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 82 (135)
T ss_dssp CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred cccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceec
Confidence 4789998 67999999999999999999999999999998899999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCCeeeecCCCceeeCCCCCCCCccccCccCCCCCCC
Q psy17084 642 NGHCDRGTCKHGGTCADLGSSFFCHCPPDWEGTSCHIGKLNACKSNP 688 (721)
Q Consensus 642 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~~C~~~~ 688 (721)
+++|...+|.++++|+++.++|+|+|++||+|..|+ .++++|..++
T Consensus 83 ~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~-~~i~~C~~~~ 128 (135)
T 2vj3_A 83 TDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ-VDLHHILDAQ 128 (135)
T ss_dssp CCTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSC-EECC------
T ss_pred CCcccCCCcCCCCEeECCCCCeEEECCCCCcCCccC-ccCccccCCC
Confidence 899999999999999999999999999999999998 5789997654
No 5
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.86 E-value=1.5e-21 Score=178.13 Aligned_cols=122 Identities=38% Similarity=1.034 Sum_probs=102.2
Q ss_pred eccCCCCC--CCCCCCCCceeeCCCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCCCCCCCCCCEEeeCCCCeEeec
Q psy17084 173 CVDHDHCN--PNPCLNGAPCFNTQADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECVSNPCQNGGTCVDLVDGYKCEC 250 (721)
Q Consensus 173 C~~~~~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C 250 (721)
|+|+|+|+ .+||.++++|+++.++|+|+|++||+|..|+. ++++|..+||.++++|++..++|+|+|
T Consensus 2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~-----------~~~~C~~~~C~~~~~C~~~~g~~~C~C 70 (135)
T 2vj3_A 2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI-----------DVNECVSNPCQNDATCLDQIGEFQCIC 70 (135)
T ss_dssp -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCE-----------ECCTTTTCCCCSSCEEEECSSCEEEEC
T ss_pred CcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccc-----------cCccCCCCCCCCCCEEeCCCCCceeeC
Confidence 56888887 57899899999999999999999999988764 678888889998899999888999999
Q ss_pred CCCCccCCCccCCCCCCCCCCCCCCcceEecCCCcEEeCCCCCccCCCCcCCCCCC
Q psy17084 251 TQAWEGSNCQYDADECQKSPCVNAALGCTNLVGDYRCNCSPGWTGHNCDVNINDCV 306 (721)
Q Consensus 251 ~~G~~G~~C~~~~~~C~~~~C~~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~ 306 (721)
++||+|..|+.++++|...+|.+. +.|++..++|+|.|++||+|..|++++++|.
T Consensus 71 ~~G~~G~~C~~~~~~C~~~~C~~~-g~C~~~~g~~~C~C~~G~~G~~C~~~i~~C~ 125 (135)
T 2vj3_A 71 MPGYEGVHCEVNTDECASSPCLHN-GRCLDKINEFQCECPTGFTGHLCQVDLHHIL 125 (135)
T ss_dssp CTTEESSSSCEECCTTTTCCSTTT-CEEEECSSCEEEECCTTEESSSSCEECC---
T ss_pred CCCCcCCcceecCCcccCCCcCCC-CEeECCCCCeEEECCCCCcCCccCccCcccc
Confidence 999999999888888988888776 6788888888888888888888887777765
No 6
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.84 E-value=7.1e-22 Score=191.15 Aligned_cols=147 Identities=23% Similarity=0.565 Sum_probs=127.4
Q ss_pred CCCCCCCCCEEecCCCCeeeecCCCcccccccCCCCCCCCceeeCCCCccCCccccCCCCCC----CCCCCCCCEEeecC
Q psy17084 509 KHNPCQNGGTCVDKVNSFQCICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYCHENINDCK----HNPCQNGGTCVDKV 584 (721)
Q Consensus 509 ~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~----~~~C~~~g~C~~~~ 584 (721)
..+||.+ |+|++..++|+|.|++||+|.. +..|+ ++++|. .+||.++++|++..
T Consensus 9 ~~~pC~n-g~C~~~~g~~~C~C~~G~~g~~--------------------~~~C~-~id~C~~~~~~~~C~~~~~C~~~~ 66 (186)
T 1z1y_A 9 VDTICXN-GQLVQMSNHFXCMCNEGLVHLS--------------------ENTCE-EXNECXXETLGXACGEFGQCIENP 66 (186)
T ss_dssp TTCCCBT-EEEEECSSCEEEEECTTEEEEE--------------------TTEEE-ECCCCSGGGTTSEEETTEEEEECS
T ss_pred CCCCCCC-CEeECCCCCeEeECCCCCccCC--------------------CCccC-CCCcccCCCCCCCCCCCCEeecCC
Confidence 4678985 5999999999999999998751 23444 678898 77899999999998
Q ss_pred -----CCeEEeccCCCccCcccccCCCCCCCCCCCCcEEe----eCCCCeEEecCCCCcc-----ccccCC-CCCCCCCC
Q psy17084 585 -----NSFQCICRDGWEGEICANNKNECEPNPCKNNGTCI----DGHADFTCLCKNGWKG-----KTCTSK-NGHCDRGT 649 (721)
Q Consensus 585 -----~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~----~~~~~~~C~C~~G~~G-----~~C~~~-~~~C~~~~ 649 (721)
++|+|+|++||+|..+.-.+++|..+||.++|+|+ +..++|+|+|++||+| ..|+.+ +++|.. +
T Consensus 67 ~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~-~ 145 (186)
T 1z1y_A 67 DPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQL-X 145 (186)
T ss_dssp STTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCC-C
T ss_pred CCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccc-c
Confidence 89999999999998554447899999999999999 7788999999999998 889764 578874 9
Q ss_pred C-CCCCeeeecCCCceeeCCCCCCCCcccc
Q psy17084 650 C-KHGGTCADLGSSFFCHCPPDWEGTSCHI 678 (721)
Q Consensus 650 C-~~~~~C~~~~~~~~C~C~~G~~G~~C~~ 678 (721)
| .++++|+++.++|+|+|++||+|+.++.
T Consensus 146 C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 146 CNTDNEVCXNVEGVYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp CCTTTEEEEEETTEEEEEECTTCEEETTTT
T ss_pred ccccCcceecCCCCeeeECCCCCccCcccc
Confidence 9 8999999999999999999999998773
No 7
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.79 E-value=1.4e-19 Score=167.23 Aligned_cols=126 Identities=34% Similarity=0.851 Sum_probs=79.3
Q ss_pred CCCCCCCCCCCCEEeecC--CCeEEeccCCCccCcccccCCCCCCCCCCCCcEEeeCCCCeEEecCCCCccccccCCCCC
Q psy17084 567 NDCKHNPCQNGGTCVDKV--NSFQCICRDGWEGEICANNKNECEPNPCKNNGTCIDGHADFTCLCKNGWKGKTCTSKNGH 644 (721)
Q Consensus 567 ~~C~~~~C~~~g~C~~~~--~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~ 644 (721)
|+|..+||.++++|++.. ++|+|+|++||+|..|+..+ ++... ...| ..++.
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~-~~~~~------------------------~~~c-~~~~~ 54 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVV-EVASD------------------------EEEP-TSAGP 54 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCC-CCTTT------------------------TTSC-CCCCT
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCc-ccccc------------------------cccc-ccCCc
Confidence 356666676666776654 45667777777766665321 11000 0011 13456
Q ss_pred CCCCCCCCCCeee-------ecCCCceeeCCCCCCCCccccCccCCCCCCCCCCCCeEeeCCCceeeecCCCCccCCccc
Q psy17084 645 CDRGTCKHGGTCA-------DLGSSFFCHCPPDWEGTSCHIGKLNACKSNPCKNGGTCVNTGDLYSCICKEGFVHALLFT 717 (721)
Q Consensus 645 C~~~~C~~~~~C~-------~~~~~~~C~C~~G~~G~~C~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~c~~ 717 (721)
|...+|.++++|+ ++.++|+|+|++||+|..|+ .++++|..+||.++++|+++.++|+|+|++||+|+.++.
T Consensus 55 C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~-~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 55 CTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQ-HNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp TSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSC-EECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred CCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcc-cCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCcee
Confidence 6667777777777 55567778888888887776 467778777787778888877788888888888877765
Q ss_pred CC
Q psy17084 718 RR 719 (721)
Q Consensus 718 ~~ 719 (721)
..
T Consensus 134 ~~ 135 (143)
T 4d90_A 134 KG 135 (143)
T ss_dssp C-
T ss_pred cC
Confidence 43
No 8
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.78 E-value=3e-19 Score=165.04 Aligned_cols=105 Identities=35% Similarity=0.951 Sum_probs=62.8
Q ss_pred CCceeeCCCCccCCccccCCCCCCCCCCCCCCEEeecCCCeEEeccCCCccCcccccCCCCCCCCCCCCcEEe-------
Q psy17084 547 GSFKCSCDAGFSGKYCHENINDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANNKNECEPNPCKNNGTCI------- 619 (721)
Q Consensus 547 ~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~------- 619 (721)
++|+|+|++||+|..|+..+ ++.. . ...| ..+++|..+||.++++|+
T Consensus 21 g~~~C~C~~G~~G~~C~~~~-~~~~----~--------------------~~~c-~~~~~C~~~~C~~~g~C~~~~~~~~ 74 (143)
T 4d90_A 21 GSFSCECPDGFTDPNCSSVV-EVAS----D--------------------EEEP-TSAGPCTPNPCHNGGTCEISEAYRG 74 (143)
T ss_dssp -CCEEECCTTCCTTTTCSCC-CCTT----T--------------------TTSC-CCCCTTSSCCCCTTCEEEECCCEET
T ss_pred CCEEeECCCCCCCCCCccCc-cccc----c--------------------cccc-ccCCcCCCCCCCCCCEecCCCcccc
Confidence 57999999999999997522 1110 0 0011 134455555666666665
Q ss_pred eCCCCeEEecCCCCccccccCCCCCCCCCCCCCCCeeeecCCCceeeCCCCCCCCccc
Q psy17084 620 DGHADFTCLCKNGWKGKTCTSKNGHCDRGTCKHGGTCADLGSSFFCHCPPDWEGTSCH 677 (721)
Q Consensus 620 ~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~ 677 (721)
+..++|+|+|++||+|..|+.++++|...+|.++++|+++.++|+|+|++||+|++++
T Consensus 75 ~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 132 (143)
T 4d90_A 75 DTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQ 132 (143)
T ss_dssp TEECCEEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSC
T ss_pred CCCCCeEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCce
Confidence 3345566666666666666555566666666666666666666666666666666655
No 9
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.78 E-value=8e-20 Score=191.08 Aligned_cols=162 Identities=34% Similarity=0.865 Sum_probs=75.1
Q ss_pred CCCCCCCCCCCCEEecCCCCeeeecCCCcccccccCCCCCCCCceeeCCCCccCCccccCCCCCCCCCCCCCCEEeecCC
Q psy17084 506 NDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYCHENINDCKHNPCQNGGTCVDKVN 585 (721)
Q Consensus 506 ~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~ 585 (721)
..| +++|.++|+|++ .++|.|++||+|..|+. +.|. .+|.++|+|++
T Consensus 149 ~~C-~~~C~~~G~C~~---~~~C~C~~G~~G~~C~~-------------------------~~C~-~~C~~~G~C~~--- 195 (324)
T 2ygq_A 149 AEC-PGGCRNGGFCNE---RRICECPDGFHGPHCEK-------------------------ALCT-PRCMNGGLCVT--- 195 (324)
T ss_dssp CCC-SSCCCSSCEECT---TSCEECCTTEESSSSCE-------------------------ESSS-SCCCTTCEECS---
T ss_pred CCC-CCCCCCCCEECC---CCeEECCCCCcCCCCCC-------------------------CCCC-CCCCCCCEEcC---
Confidence 345 468999999986 36788888888776653 1233 36899999976
Q ss_pred CeEEeccCCCccCcccccCCCCCCCCCCCCcEEeeCCCCeEEecCCCCccccccCCCCCCCCCCCCCCCeeeecCCCcee
Q psy17084 586 SFQCICRDGWEGEICANNKNECEPNPCKNNGTCIDGHADFTCLCKNGWKGKTCTSKNGHCDRGTCKHGGTCADLGSSFFC 665 (721)
Q Consensus 586 ~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C 665 (721)
.++|+|++||+|..|+. +.|. .+|.++|+|++ .++|.|++||+|..|+. +.|. .+|.++|+|+. .++|
T Consensus 196 ~~~C~C~~G~~G~~C~~--~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~~--~~C~-~~C~~~g~C~~---~~~C 263 (324)
T 2ygq_A 196 PGFCICPPGFYGVNCDK--ANCS-TTCFNGGTCFY---PGKCICPPGLEGEQCEI--SKCP-QPCRNGGKCIG---KSKC 263 (324)
T ss_dssp SCCEECCTTCBTTTTCB--CCCS-SCCCSSCCBSC---SSCBCCCTTCCTTTTC--------------------------
T ss_pred CCEEeCCCCccCCCccc--CcCC-CCCCCCCeeCC---CCeeeCCCCccCCCCCc--CcCC-CcCCCCCEECC---CCEE
Confidence 46899999999999975 3465 68999999985 46999999999999974 4565 68999999984 5789
Q ss_pred eCCCCCCCCccccCccCCCCCCCCCCCCeEeeCCCceeeecCCCCccCCcccCC
Q psy17084 666 HCPPDWEGTSCHIGKLNACKSNPCKNGGTCVNTGDLYSCICKEGFVHALLFTRR 719 (721)
Q Consensus 666 ~C~~G~~G~~C~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~c~~~~ 719 (721)
+|++||+|+.|+ +++|. .+|.++|+|++ .++|+|++||+|..|+.+.
T Consensus 264 ~C~~G~~G~~C~---~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~~~~ 310 (324)
T 2ygq_A 264 KCSKGYQGDLCS---KPVCE-PGCGAHGTCHE---PNKCQCQEGWHGRHCNKRY 310 (324)
T ss_dssp ------------------------------------------------------
T ss_pred ECCCCCcCCCCc---CCCCC-CCCCCCCEECC---CCEeECCCCCcCCCCCCCC
Confidence 999999999998 36775 68999999996 5799999999999998654
No 10
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.77 E-value=6.1e-20 Score=174.10 Aligned_cols=149 Identities=33% Similarity=0.808 Sum_probs=113.3
Q ss_pred CceeeCCCCccCCccccCCCCCCC-CCCCCCCEEeecCCCeEEeccCCCccCcccccCCCCCCCCCC-CCcEEeeCCCCe
Q psy17084 548 SFKCSCDAGFSGKYCHENINDCKH-NPCQNGGTCVDKVNSFQCICRDGWEGEICANNKNECEPNPCK-NNGTCIDGHADF 625 (721)
Q Consensus 548 ~~~C~C~~G~~G~~C~~~~~~C~~-~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~-~~g~C~~~~~~~ 625 (721)
.++|+|++||+|..|+. .|.. ..|..+++|+. .++|+|++||+|+.|+.. +|. .+|. .+|+|++ +|
T Consensus 16 ~~~c~C~~g~~G~~C~~---~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~~C~~~--~C~-~~C~~~~g~C~~---~~ 83 (169)
T 2vj2_A 16 RSAVTCDDYYYGFGCNK---FCRPRDDFFGHYACDQ---NGNKTCMEGWMGPECNRA--ICR-QGCSPKHGSCKL---PG 83 (169)
T ss_dssp -----CCTTEETTTTCE---ECCCEEETTEEEEECS---SCCEEECTTEESTTSCEE--CCC-TTCCTTTEECSS---TT
T ss_pred CeeeeCCCcCcCCCccc---ccCCCCCcCCCCEeCC---CCeeECCCCCcCCCCCCC--CCC-CCCCCCCcccCC---CC
Confidence 34555555555655542 2332 24777889964 347999999999999753 465 3576 6788975 58
Q ss_pred EEecCCCCccccccCCCCCCCCCC-CCCCCeeeecCCCceeeCCCCCCCCccccCccCCCCC-CCCCCCCeEeeC-CCce
Q psy17084 626 TCLCKNGWKGKTCTSKNGHCDRGT-CKHGGTCADLGSSFFCHCPPDWEGTSCHIGKLNACKS-NPCKNGGTCVNT-GDLY 702 (721)
Q Consensus 626 ~C~C~~G~~G~~C~~~~~~C~~~~-C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~~C~~-~~C~~~~~C~~~-~~~~ 702 (721)
+|+|++||+|..|+. |...+ |.+ ++|+ ++|+|+|++||+|..|+ .++++|.. ++|.++++|+++ +++|
T Consensus 84 ~C~C~~G~~G~~C~~----C~~~~~C~~-g~C~---~~~~C~C~~G~~G~~C~-~~~~~C~~~~~C~~~g~C~~~~~~~~ 154 (169)
T 2vj2_A 84 DCRCQYGWQGLYCDK----CIPHPGCVH-GICN---EPWQCLCETNWGGQLCD-KDLNYCGTHQPCLNGGTCSNTGPDKY 154 (169)
T ss_dssp CCEECTTEESSSSCE----ECCCTTCSS-EECS---STTCCEECTTEETTTTC-EESCHHHHTCCCCTTCEEEECSTTCE
T ss_pred eeECCCCCCCCCccc----CCCCCCCCC-CCcC---CCCEEeCCCCCCCCccc-CCCCCCCCCCCCCCCCEEcCCCCCCc
Confidence 999999999999963 55555 775 4887 57899999999999998 46889974 899999999997 8999
Q ss_pred eeecCCCCccCCccc
Q psy17084 703 SCICKEGFVHALLFT 717 (721)
Q Consensus 703 ~C~C~~G~~g~~c~~ 717 (721)
+|+|++||+|..|+.
T Consensus 155 ~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 155 QCSCPEGYSGPNCEI 169 (169)
T ss_dssp EEECCTTCCSTTSCC
T ss_pred EeECCCCCcCcCcCC
Confidence 999999999999863
No 11
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.77 E-value=2.6e-19 Score=187.20 Aligned_cols=155 Identities=39% Similarity=1.040 Sum_probs=56.9
Q ss_pred CCCCCCCEeccCCCCceeEeCCCCCccCccCCCCCCCCCCCCCCCCeeeecCCceEEecCCCCCCCccCccCCCCCcccc
Q psy17084 17 EPCQNGGTCENTAPDQYLCTCPEGFSGINCEVVDNPCMMGPCGNGGQCKETAGQFQCVCAPGWTGPTCKIKHNFFPYLQF 96 (721)
Q Consensus 17 ~~C~~~g~C~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~~~~~~c 96 (721)
++|.++|+|++ .++|+|++||+|..|+. +.|. .+|.++|+|++ .++|.|++||+|..|+
T Consensus 153 ~~C~~~G~C~~----~~~C~C~~G~~G~~C~~--~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~----------- 211 (324)
T 2ygq_A 153 GGCRNGGFCNE----RRICECPDGFHGPHCEK--ALCT-PRCMNGGLCVT---PGFCICPPGFYGVNCD----------- 211 (324)
T ss_dssp SCCCSSCEECT----TSCEECCTTEESSSSCE--ESSS-SCCCTTCEECS---SCCEECCTTCBTTTTC-----------
T ss_pred CCCCCCCEECC----CCeEECCCCCcCCCCCC--CCCC-CCCCCCCEEcC---CCEEeCCCCccCCCcc-----------
Confidence 46777777763 36777777777777764 3454 35777777765 2457777777777664
Q ss_pred cccccCccccccCCCCCCCCCCCCCCCeeccCCCCceeeeCCCCCcCCcccccCCCCCCCCCCCCCeeeecCCceeeccC
Q psy17084 97 IPLTTSLFRLLSDLNYCGTHEPCQNGGTCENTAPDQYLCTCPEGFSGINCEVVDNPCMMGPCGNGGQCKETAGQFQCVDH 176 (721)
Q Consensus 97 ~c~~~~~~~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~~~ 176 (721)
...|. .+|.++|+|++ .++|.|++||+|..|++ +.|.
T Consensus 212 -------------~~~C~--~~C~~~G~C~~----~~~C~C~~G~~G~~C~~--~~C~---------------------- 248 (324)
T 2ygq_A 212 -------------KANCS--TTCFNGGTCFY----PGKCICPPGLEGEQCEI--SKCP---------------------- 248 (324)
T ss_dssp -------------BCCCS--SCCCSSCCBSC----SSCBCCCTTCCTTTTC-----------------------------
T ss_pred -------------cCcCC--CCCCCCCeeCC----CCeeeCCCCccCCCCCc--CcCC----------------------
Confidence 01232 35666677754 25677777777776653 1221
Q ss_pred CCCCCCCCCCCCceeeCCCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCCCCCCCCCCEEeeCCCCeEeecCCCCcc
Q psy17084 177 DHCNPNPCLNGAPCFNTQADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECVSNPCQNGGTCVDLVDGYKCECTQAWEG 256 (721)
Q Consensus 177 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G 256 (721)
.+|.++++|+. .++|.|++||+|..|+. ++|. .+|.++|+|++ .++|+|++||+|
T Consensus 249 -----~~C~~~g~C~~---~~~C~C~~G~~G~~C~~-------------~~C~-~~C~~~g~C~~---~~~C~C~~G~~G 303 (324)
T 2ygq_A 249 -----QPCRNGGKCIG---KSKCKCSKGYQGDLCSK-------------PVCE-PGCGAHGTCHE---PNKCQCQEGWHG 303 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----CcCCCCCEECC---CCEEECCCCCcCCCCcC-------------CCCC-CCCCCCCEECC---CCEeECCCCCcC
Confidence 23333444432 35567777777766642 3343 45666667764 356777777777
Q ss_pred CCCc
Q psy17084 257 SNCQ 260 (721)
Q Consensus 257 ~~C~ 260 (721)
..|+
T Consensus 304 ~~C~ 307 (324)
T 2ygq_A 304 RHCN 307 (324)
T ss_dssp ----
T ss_pred CCCC
Confidence 7665
No 12
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.74 E-value=3.5e-19 Score=168.83 Aligned_cols=149 Identities=30% Similarity=0.866 Sum_probs=112.6
Q ss_pred CceEeccCCCCCCCcccccCCCCCC-CCCCCCCEEecCCCCeeeecCCCcccccccCCCCCCCCceeeCCCCccCCcccc
Q psy17084 486 GSFKCSCDAGFSGKYCHENINDCKH-NPCQNGGTCVDKVNSFQCICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYCHE 564 (721)
Q Consensus 486 ~~~~C~C~~G~~G~~C~~~~~~C~~-~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C~~ 564 (721)
..++|+|++||+|..|+. +|.. .+|..+++|+. .++|+|++||+|..|+.
T Consensus 15 ~~~~c~C~~g~~G~~C~~---~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~~C~~----------------------- 65 (169)
T 2vj2_A 15 GRSAVTCDDYYYGFGCNK---FCRPRDDFFGHYACDQ---NGNKTCMEGWMGPECNR----------------------- 65 (169)
T ss_dssp ------CCTTEETTTTCE---ECCCEEETTEEEEECS---SCCEEECTTEESTTSCE-----------------------
T ss_pred cCeeeeCCCcCcCCCccc---ccCCCCCcCCCCEeCC---CCeeECCCCCcCCCCCC-----------------------
Confidence 348899999999999864 3553 35777888864 33788888888776653
Q ss_pred CCCCCCCCCCC-CCCEEeecCCCeEEeccCCCccCcccccCCCCCCCC-CCCCcEEeeCCCCeEEecCCCCccccccCCC
Q psy17084 565 NINDCKHNPCQ-NGGTCVDKVNSFQCICRDGWEGEICANNKNECEPNP-CKNNGTCIDGHADFTCLCKNGWKGKTCTSKN 642 (721)
Q Consensus 565 ~~~~C~~~~C~-~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~-C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~ 642 (721)
+.|.. .|. .+|.|++ .|+|+|++||+|..|+. |...+ |.+ |+|+ ++|+|+|++||+|..|+.++
T Consensus 66 --~~C~~-~C~~~~g~C~~---~~~C~C~~G~~G~~C~~----C~~~~~C~~-g~C~---~~~~C~C~~G~~G~~C~~~~ 131 (169)
T 2vj2_A 66 --AICRQ-GCSPKHGSCKL---PGDCRCQYGWQGLYCDK----CIPHPGCVH-GICN---EPWQCLCETNWGGQLCDKDL 131 (169)
T ss_dssp --ECCCT-TCCTTTEECSS---TTCCEECTTEESSSSCE----ECCCTTCSS-EECS---STTCCEECTTEETTTTCEES
T ss_pred --CCCCC-CCCCCCcccCC---CCeeECCCCCCCCCccc----CCCCCCCCC-CCcC---CCCEEeCCCCCCCCcccCCC
Confidence 11322 354 5677865 57899999999999963 66666 775 6897 57899999999999998778
Q ss_pred CCCCC-CCCCCCCeeeec-CCCceeeCCCCCCCCccc
Q psy17084 643 GHCDR-GTCKHGGTCADL-GSSFFCHCPPDWEGTSCH 677 (721)
Q Consensus 643 ~~C~~-~~C~~~~~C~~~-~~~~~C~C~~G~~G~~C~ 677 (721)
++|.. .+|.++|+|+++ .++|+|+|++||+|+.|+
T Consensus 132 ~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 132 NYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168 (169)
T ss_dssp CHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSC
T ss_pred CCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcC
Confidence 88875 799999999996 789999999999999987
No 13
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.72 E-value=6.5e-18 Score=191.64 Aligned_cols=172 Identities=27% Similarity=0.653 Sum_probs=137.4
Q ss_pred CCCCCCCCCCCEEecCCCCee---eecCCCcccccccCCCCCCCCceeeCCCCccCCccccCCCCCCC----CCCCCCCE
Q psy17084 507 DCKHNPCQNGGTCVDKVNSFQ---CICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYCHENINDCKH----NPCQNGGT 579 (721)
Q Consensus 507 ~C~~~~C~~~g~C~~~~g~~~---C~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~----~~C~~~g~ 579 (721)
+|..+||.++++|.+..|+|. |.|++||+|..|+. ..++.+.. ..++|.. .+|.++|+
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~------------~~~~~~~~---~~~~C~~~~~~~~Cs~~G~ 500 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCEC------------SEEDYRPS---QQDECSPREGQPVCSQRGE 500 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCC------------SCC---------CCCCSSSSSSCGGGGSEE
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceee------------ccCccCCc---cCCcCCCCCCCCCCCCCCE
Confidence 567788999999988888887 99999999988753 33333322 2345654 35999999
Q ss_pred EeecCCCeEEecc----CCCccCcccccCCCCCC---CCCCCCcEEeeCCCCeEEecCCCCcccccc--CCCCCCCC---
Q psy17084 580 CVDKVNSFQCICR----DGWEGEICANNKNECEP---NPCKNNGTCIDGHADFTCLCKNGWKGKTCT--SKNGHCDR--- 647 (721)
Q Consensus 580 C~~~~~~~~C~C~----~G~~G~~C~~~~~~C~~---~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~--~~~~~C~~--- 647 (721)
|++ ++|.|+ +||+|..|+.++++|.. .+|.++|+|++ ++|.|++||+|..|+ ..++.|..
T Consensus 501 C~~----g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~CeC~~~~~~C~~~~g 572 (690)
T 3fcs_B 501 CLC----GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCNCTTRTDTCMSSNG 572 (690)
T ss_dssp ECS----SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSCEECCCTTTBCTTS
T ss_pred EEC----CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCccCCCCCcccCCCC
Confidence 984 489999 99999999988888975 47999999986 699999999999998 56678875
Q ss_pred CCCCCCCeeeecCCCceeeC-CCCCCCCccccCccCCCCCCCCCCCCeEeeCCCceeeecCCCCccCCcc
Q psy17084 648 GTCKHGGTCADLGSSFFCHC-PPDWEGTSCHIGKLNACKSNPCKNGGTCVNTGDLYSCICKEGFVHALLF 716 (721)
Q Consensus 648 ~~C~~~~~C~~~~~~~~C~C-~~G~~G~~C~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~c~ 716 (721)
.+|.++|+|++ .+|.| ++||+|..|+. ...| +++|.++++|++ |+.||+|..|+
T Consensus 573 ~~C~~~G~C~~----g~C~C~~~Gy~G~~Ce~--C~~C-~~~C~~~g~Cv~--------C~~g~tG~~C~ 627 (690)
T 3fcs_B 573 LLCSGRGKCEC----GSCVCIQPGSYGDTCEK--CPTC-PDACTFKKECVE--------CKKFDRGALHD 627 (690)
T ss_dssp SBTSSSCEEET----TEEECCSTTCBSTTSCB--CTTS-CCTTTSCCGGGT--------TTTTCCSSSSS
T ss_pred CCCCCCCEEeC----CEEECCCCCccCCCcCc--CCCC-CCCCCCCCCccc--------CCCCCccCCCC
Confidence 57999999975 38999 99999999983 2456 578999999985 99999999654
No 14
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.70 E-value=1.2e-18 Score=164.37 Aligned_cols=137 Identities=28% Similarity=0.721 Sum_probs=103.3
Q ss_pred cCCCCCCCCCCCCCCCEeccCCCCceeEeCCCCCc----cCccCCCCCC--CCCC--CC--CCCCeeeecCC----ceEE
Q psy17084 8 SDLNYCGTHEPCQNGGTCENTAPDQYLCTCPEGFS----GINCEVVDNP--CMMG--PC--GNGGQCKETAG----QFQC 73 (721)
Q Consensus 8 ~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~----G~~C~~~~~~--C~~~--~C--~~~g~C~~~~g----~~~C 73 (721)
+|||||++.+||. +|+|++ .+++|+|.|++||+ |..|+ ++++ |... +| .++++|+++.+ +|+|
T Consensus 1 ~dideC~~~~~C~-~~~C~n-~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C 77 (162)
T 1uzk_A 1 TDVNECLDPTTCI-SGNCVN-TPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASC 77 (162)
T ss_dssp CCCCGGGSTTSSB-TSEEEE-ETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHH
T ss_pred CccccCCCCCCCC-CCEeEC-CCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCcee
Confidence 5899998658997 799999 57999999999998 89998 5665 8653 34 35789999887 8999
Q ss_pred ecCCCCC-CCccCccCCCCCcccccccccCccccccCCCCCCCCCCCCCCCeeccCCCCceeeeCCC--CCcCCcccccC
Q psy17084 74 VCAPGWT-GPTCKIKHNFFPYLQFIPLTTSLFRLLSDLNYCGTHEPCQNGGTCENTAPDQYLCTCPE--GFSGINCEVVD 150 (721)
Q Consensus 74 ~C~~Gy~-G~~C~~~~~~~~~~~c~c~~~~~~~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~--Gy~G~~C~~~~ 150 (721)
.|++||+ |..|+ +|.....++|+|+|++ ||+|..
T Consensus 78 ~C~~G~~~~~~C~--------------------------------------~C~~~~~~~y~C~C~~g~G~~~~~----- 114 (162)
T 1uzk_A 78 CCSLGKAWGTPCE--------------------------------------MCPAVNTSEYKILCPGGEGFRPNP----- 114 (162)
T ss_dssp HTTTCCEETTTTE--------------------------------------ECCCTTSHHHHHHCTTCTTEEECT-----
T ss_pred eCCCCCCcCCCcc--------------------------------------cCCCCCCCCceeECCCCCCcccCC-----
Confidence 9999997 44442 1332245789999998 898742
Q ss_pred CCCCCCCCCCCCeeeecCCceeeccCCCCCC--CCCCCCCceeeCCCCeEeeCCCCCccCc
Q psy17084 151 NPCMMGPCGNGGQCKETAGQFQCVDHDHCNP--NPCLNGAPCFNTQADYYCHCTEDWEGKN 209 (721)
Q Consensus 151 ~~C~~~~C~~~~~C~~~~~~~~C~~~~~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~G~~ 209 (721)
....|++||||+. ++|.+ ++|+|+.++|+|.|++||+|..
T Consensus 115 ------------------~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 115 ------------------ITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp ------------------TTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred ------------------CCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 1235778888875 45874 7999999999999999999965
No 15
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.69 E-value=2.5e-17 Score=186.93 Aligned_cols=168 Identities=27% Similarity=0.638 Sum_probs=128.8
Q ss_pred CCCCCCCCCCCCEeccCCCCcee---EeCCCCCccCccCCCC--------CCCCCC----CCCCCCeeeecCCceEEecC
Q psy17084 12 YCGTHEPCQNGGTCENTAPDQYL---CTCPEGFSGINCEVVD--------NPCMMG----PCGNGGQCKETAGQFQCVCA 76 (721)
Q Consensus 12 ~C~~~~~C~~~g~C~~~~~~~~~---C~C~~G~~G~~C~~~~--------~~C~~~----~C~~~g~C~~~~g~~~C~C~ 76 (721)
+|.. +||.++++|.+ ..+.|. |.|++||+|..|+..+ ++|... +|.++|+|++ ++|.|+
T Consensus 436 ~C~~-~pc~n~~~C~~-g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~ 509 (690)
T 3fcs_B 436 ACQA-QAEPNSHRCNN-GNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCH 509 (690)
T ss_dssp GGGT-TCCTTCTTTTT-TSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEEC
T ss_pred CCcC-CCCCCCCcccC-CCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEee
Confidence 6777 89999999986 457777 9999999999998765 678753 5999999984 489999
Q ss_pred ----CCCCCCccCccCCCCCcccccccccCccccccCCCCCCCC--CCCCCCCeeccCCCCceeeeCCCCCcCCccc--c
Q psy17084 77 ----PGWTGPTCKIKHNFFPYLQFIPLTTSLFRLLSDLNYCGTH--EPCQNGGTCENTAPDQYLCTCPEGFSGINCE--V 148 (721)
Q Consensus 77 ----~Gy~G~~C~~~~~~~~~~~c~c~~~~~~~~~~~~~~C~~~--~~C~~~g~C~~~~~~~~~C~C~~Gy~G~~C~--~ 148 (721)
+||+|..|+ .+.++|... .+|.++|+|++ ++|.|++||+|..|+ .
T Consensus 510 ~~~~~Gy~G~~Ce----------------------~~~~~C~~~~~~~C~~~G~C~~-----g~C~C~~Gy~G~~CeC~~ 562 (690)
T 3fcs_B 510 SSDFGKITGKYCE----------------------CDDFSCVRYKGEMCSGHGQCSC-----GDCLCDSDWTGYYCNCTT 562 (690)
T ss_dssp CCSSCCCBSTTSC----------------------BCSSCCCBSSSSBGGGSEEEET-----TEEEECTTEESSSSCEEC
T ss_pred cCCCCCeeCCCcC----------------------cccCcCcCCCCCCCCCCCEecC-----CeeECcCCCcCCCCccCC
Confidence 999999997 234556532 57999999976 689999999999998 3
Q ss_pred cCCCCCCCCCCCCCeeeecCCceeeccCCCCCCCCCCCCCceeeCCCCeEeeC-CCCCccCcCCCCCccCCCCCCCCCCC
Q psy17084 149 VDNPCMMGPCGNGGQCKETAGQFQCVDHDHCNPNPCLNGAPCFNTQADYYCHC-TEDWEGKNCSFPRYKCDNPPCDDIDE 227 (721)
Q Consensus 149 ~~~~C~~~~C~~~~~C~~~~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C-~~G~~G~~C~~~~~~c~~~~C~~~~~ 227 (721)
..+.|.... ..+|.+++.|++ .+|.| ++||+|..|+. | ..
T Consensus 563 ~~~~C~~~~-----------------------g~~C~~~G~C~~----g~C~C~~~Gy~G~~Ce~---------C---~~ 603 (690)
T 3fcs_B 563 RTDTCMSSN-----------------------GLLCSGRGKCEC----GSCVCIQPGSYGDTCEK---------C---PT 603 (690)
T ss_dssp CCTTTBCTT-----------------------SSBTSSSCEEET----TEEECCSTTCBSTTSCB---------C---TT
T ss_pred CCCcccCCC-----------------------CCCCCCCCEEeC----CEEECCCCCccCCCcCc---------C---CC
Confidence 344443210 134555666654 27999 99999998873 1 23
Q ss_pred CCCCCCCCCCEEeeCCCCeEeecCCCCccCCCc
Q psy17084 228 CVSNPCQNGGTCVDLVDGYKCECTQAWEGSNCQ 260 (721)
Q Consensus 228 C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~ 260 (721)
| +.+|.++++|++ |.++|+|..|+
T Consensus 604 C-~~~C~~~g~Cv~--------C~~g~tG~~C~ 627 (690)
T 3fcs_B 604 C-PDACTFKKECVE--------CKKFDRGALHD 627 (690)
T ss_dssp S-CCTTTSCCGGGT--------TTTTCCSSSSS
T ss_pred C-CCCCCCCCCccc--------CCCCCccCCCC
Confidence 4 478999999975 99999999875
No 16
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.65 E-value=2.1e-16 Score=171.05 Aligned_cols=157 Identities=26% Similarity=0.683 Sum_probs=109.9
Q ss_pred eEeccCCCCCCCcccccCCCCCCCCCCCCCEEecCCCCeeeecCCCcccccccCCCCCCCCceeeCCCCccCCccccCCC
Q psy17084 488 FKCSCDAGFSGKYCHENINDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYCHENIN 567 (721)
Q Consensus 488 ~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C~~~~~ 567 (721)
+.|.|++||+|+.|+. .| .||.++|+|++ ++++|+|++||+|..|+.. |.++|+|..|..
T Consensus 185 ~~c~C~~g~~G~~C~~---~C--~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~----------C~~g~~g~~C~~--- 244 (423)
T 2gy5_A 185 IVRRCEAQKWGPECNH---LC--TACMNNGVCHE--DTGECICPPGFMGRTCEKA----------CELHTFGRTCKE--- 244 (423)
T ss_dssp EECSSCTTEESTTSCE---EC--CCCCTTCEECT--TTCCEECCTTEESTTSCEE----------CCTTEESTTSCE---
T ss_pred cCCcCCCCCCCCCCCC---CC--CCCCCCCEEEC--CCCcEeCCCCccCCCcccc----------cCCCCCCCCcCc---
Confidence 6799999999999874 24 37999999987 4579999999999999863 889999998863
Q ss_pred CCC-CCCCCCCCEEeecCCCeEEeccCCCccCccccc------CCCCC-CCCCCCCcEEeeCCCCeEEecCCCCcccccc
Q psy17084 568 DCK-HNPCQNGGTCVDKVNSFQCICRDGWEGEICANN------KNECE-PNPCKNNGTCIDGHADFTCLCKNGWKGKTCT 639 (721)
Q Consensus 568 ~C~-~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~------~~~C~-~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~ 639 (721)
+|. ..+|.++++|. .++|+|.|++||+|..|+.. -+.|. .-+|.++|+|++.. .|.|++||+|.+|+
T Consensus 245 ~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~G~~Ce 319 (423)
T 2gy5_A 245 RCSGQEGCKSYVFCL--PDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQGLQCE 319 (423)
T ss_dssp ECCSTTTTTTCCEEE--TTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCBSTTSC
T ss_pred cCCCCCCCCCCCEEC--CCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCcCCCCc
Confidence 454 45799999996 45789999999999999741 01222 12577777776543 37777777777776
Q ss_pred CCCCCCCCCCCCCCCeeeecCCCceeeCCCCCCCCccc
Q psy17084 640 SKNGHCDRGTCKHGGTCADLGSSFFCHCPPDWEGTSCH 677 (721)
Q Consensus 640 ~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~ 677 (721)
...... ..+ ...+ ....|.|++||.|..|+
T Consensus 320 ~~~~~~-~~~-----~~~~--~~~~~~c~~g~~g~~C~ 349 (423)
T 2gy5_A 320 REGIPR-MTP-----KIVD--LPDHIEVNSGKFNPICK 349 (423)
T ss_dssp BCSSCC-CCC-----EECS--CCSBCCEESEEECCEEE
T ss_pred cCccCC-cCc-----ceec--CCCeEEeCCCccCCccc
Confidence 532211 011 1111 12236777777776665
No 17
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.63 E-value=1.9e-16 Score=146.03 Aligned_cols=122 Identities=28% Similarity=0.669 Sum_probs=98.0
Q ss_pred CCCCCCCeeccCCCCceeeeCCCCCcCCcccccCCCCCCCCCCCCCeeeecCCceeeccCCCCCCC---CCCCCCceeeC
Q psy17084 117 EPCQNGGTCENTAPDQYLCTCPEGFSGINCEVVDNPCMMGPCGNGGQCKETAGQFQCVDHDHCNPN---PCLNGAPCFNT 193 (721)
Q Consensus 117 ~~C~~~g~C~~~~~~~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~~~~~C~~~---~C~~~~~C~~~ 193 (721)
.+|.++++|++. |+|+|++||+|.. ++ .......|+++|+|+.. +|.++++|+++
T Consensus 7 ~~C~~~~~C~~~----~~C~C~~G~~g~~-~~-----------------~~~~~~~C~dideC~~~~~~~C~~~~~C~n~ 64 (143)
T 2bou_A 7 RWCPQDSSCVNA----TACRCNPGFSSFS-EI-----------------ITTPMETCDDINECATLSKVSCGKFSDCWNT 64 (143)
T ss_dssp TTCCTTEEESSS----SCEEECTTEECSS-SS-----------------BCSTTCCCEECCGGGC----CCCTTEEEEEC
T ss_pred CcCCCCCEEcCC----CEEeCCCCCcCcc-cc-----------------ccCCCCcCCccccccCCCCCCCCCCCEEEcC
Confidence 579999999873 8999999999864 21 11233467789999864 89999999999
Q ss_pred CCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCCC--CCCCCCCEEeeCCCCeEeecCCCCccCCCc
Q psy17084 194 QADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECVS--NPCQNGGTCVDLVDGYKCECTQAWEGSNCQ 260 (721)
Q Consensus 194 ~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~ 260 (721)
.++|+|.|++||+|..++......+...|++||||.. ++|.++++|+++.++|+|+|++||+|....
T Consensus 65 ~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 65 EGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp SSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTC
T ss_pred CCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCC
Confidence 9999999999999987654322233557889999984 889999999999999999999999987653
No 18
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.62 E-value=1.9e-17 Score=156.17 Aligned_cols=133 Identities=24% Similarity=0.659 Sum_probs=100.9
Q ss_pred CCCCCCC-CCCCCCCEEeecCCCeEEeccCCCc----cCcccccCCC--CCCC--CC--CCCcEEeeCCC----CeEEec
Q psy17084 565 NINDCKH-NPCQNGGTCVDKVNSFQCICRDGWE----GEICANNKNE--CEPN--PC--KNNGTCIDGHA----DFTCLC 629 (721)
Q Consensus 565 ~~~~C~~-~~C~~~g~C~~~~~~~~C~C~~G~~----G~~C~~~~~~--C~~~--~C--~~~g~C~~~~~----~~~C~C 629 (721)
+|++|+. +||. +++|+++.++|+|+|++||+ |..|+ ++++ |... +| .++++|++..+ +|+|.|
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C 79 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCC 79 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHHT
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeC
Confidence 6899984 8997 69999999999999999998 88997 5665 7543 34 35789998776 799999
Q ss_pred CCCCc-cccccCCCCCCCCCCCCCCCeeeecCCCceeeCCC--CCCCCc--cccCccCCCCC--CCCCCCCeEeeCCCce
Q psy17084 630 KNGWK-GKTCTSKNGHCDRGTCKHGGTCADLGSSFFCHCPP--DWEGTS--CHIGKLNACKS--NPCKNGGTCVNTGDLY 702 (721)
Q Consensus 630 ~~G~~-G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~--G~~G~~--C~~~~~~~C~~--~~C~~~~~C~~~~~~~ 702 (721)
++||. |..|+. |.. +..++|+|+|++ ||+|+. -...+||||+. ++|.+ ++|+|+.++|
T Consensus 80 ~~G~~~~~~C~~---------C~~-----~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy 144 (162)
T 1uzk_A 80 SLGKAWGTPCEM---------CPA-----VNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSF 144 (162)
T ss_dssp TTCCEETTTTEE---------CCC-----TTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCE
T ss_pred CCCCCcCCCccc---------CCC-----CCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCE
Confidence 99998 666641 221 235689999998 999862 11248999975 45985 7999999999
Q ss_pred eeecCCCCccCC
Q psy17084 703 SCICKEGFVHAL 714 (721)
Q Consensus 703 ~C~C~~G~~g~~ 714 (721)
+|+|++||+|+.
T Consensus 145 ~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 145 QCRCPTGYYLNE 156 (162)
T ss_dssp EEECCTTCCBCT
T ss_pred EeeCCCCccCCC
Confidence 999999999864
No 19
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.61 E-value=9.3e-16 Score=171.32 Aligned_cols=139 Identities=26% Similarity=0.726 Sum_probs=113.3
Q ss_pred CCCCCCCCCCCCCCEEeecCCC-eEE-eccCCCcc--CcccccCCCCCCCC--CCCCc---EEeeCCCCeEEe-cCCCCc
Q psy17084 565 NINDCKHNPCQNGGTCVDKVNS-FQC-ICRDGWEG--EICANNKNECEPNP--CKNNG---TCIDGHADFTCL-CKNGWK 634 (721)
Q Consensus 565 ~~~~C~~~~C~~~g~C~~~~~~-~~C-~C~~G~~G--~~C~~~~~~C~~~~--C~~~g---~C~~~~~~~~C~-C~~G~~ 634 (721)
+|++|..+||.++++|++..++ |+| .|++||+| ..|+ .+++|..+| |.+++ +|+++.++|+|. |++||+
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~ 80 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYR 80 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEE
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCCcc
Confidence 6789999999999999999854 999 99999998 7896 799999888 99999 999999999999 999999
Q ss_pred ccccc--------------CCCCCCCC--CCCCCCCeeeecC----CCceeeCCCCCCC--Ccccc-CccCCCCCCCCCC
Q psy17084 635 GKTCT--------------SKNGHCDR--GTCKHGGTCADLG----SSFFCHCPPDWEG--TSCHI-GKLNACKSNPCKN 691 (721)
Q Consensus 635 G~~C~--------------~~~~~C~~--~~C~~~~~C~~~~----~~~~C~C~~G~~G--~~C~~-~~~~~C~~~~C~~ 691 (721)
|..|+ .++++|.. .+|.++++|+++. ++|+|+|++||+| ..|+. .++++|...+
T Consensus 81 G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC~~~~--- 157 (634)
T 1yo8_A 81 GNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLN--- 157 (634)
T ss_dssp ECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEECTTSSSSCSSC---
T ss_pred cCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCcccccccCcccccCCC---
Confidence 98754 45788985 4899999999998 8999999999998 67863 4788885321
Q ss_pred CCeEeeCCCceeee---cCCC
Q psy17084 692 GGTCVNTGDLYSCI---CKEG 709 (721)
Q Consensus 692 ~~~C~~~~~~~~C~---C~~G 709 (721)
+.|.. .++|.|. |+.+
T Consensus 158 -~~C~~-~~~y~C~~dnC~~~ 176 (634)
T 1yo8_A 158 -LVCAT-NATYHCIKDNCPHL 176 (634)
T ss_dssp -CTTTT-TCSSSCSCCSSTTS
T ss_pred -CcccC-CCCccccccccccc
Confidence 23332 1466666 6664
No 20
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.60 E-value=4.9e-16 Score=143.21 Aligned_cols=114 Identities=24% Similarity=0.669 Sum_probs=80.3
Q ss_pred CCCCCCCEEeecCCCeEEeccCCCcc---------CcccccCCCCCCC---CCCCCcEEeeCCCCeEEecCCCCcccccc
Q psy17084 572 NPCQNGGTCVDKVNSFQCICRDGWEG---------EICANNKNECEPN---PCKNNGTCIDGHADFTCLCKNGWKGKTCT 639 (721)
Q Consensus 572 ~~C~~~g~C~~~~~~~~C~C~~G~~G---------~~C~~~~~~C~~~---~C~~~g~C~~~~~~~~C~C~~G~~G~~C~ 639 (721)
++|.++++|++. |+|+|++||+| ..|+ ++++|... +|.++++|+++.++|+|+|++||+|..++
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence 468888888763 78888888887 4563 57777764 77777788877778888888888776553
Q ss_pred CCCCCCCCCCCCCCCeeeecCCCceeeCCCCCCCCccccCccCCCC--CCCCCCCCeEeeCCCceeeecCCCCccCCccc
Q psy17084 640 SKNGHCDRGTCKHGGTCADLGSSFFCHCPPDWEGTSCHIGKLNACK--SNPCKNGGTCVNTGDLYSCICKEGFVHALLFT 717 (721)
Q Consensus 640 ~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~~g~~c~~ 717 (721)
... ....+..|+ ++++|. .++|.++++|+++.++|+|+|++||+|.....
T Consensus 83 ~~~--------------------------~~~~~~~C~--dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~ 134 (143)
T 2bou_A 83 KTF--------------------------KNESENTCQ--DVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIP 134 (143)
T ss_dssp SCB--------------------------SSGGGCCEE--ECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCC
T ss_pred ccc--------------------------ccCCCCCcC--CccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCc
Confidence 210 011233454 678886 36788888888888888888888888876543
No 21
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.59 E-value=2.6e-15 Score=167.71 Aligned_cols=138 Identities=28% Similarity=0.736 Sum_probs=111.7
Q ss_pred cCCCCCCCCCCCCCceeeCCC-CeEe-eCCCCCccCcCCCCCccCCCCCCCCCCCCCCCC--CCCCC---EEeeCCCCeE
Q psy17084 175 DHDHCNPNPCLNGAPCFNTQA-DYYC-HCTEDWEGKNCSFPRYKCDNPPCDDIDECVSNP--CQNGG---TCVDLVDGYK 247 (721)
Q Consensus 175 ~~~~C~~~~C~~~~~C~~~~g-~~~C-~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~~~~--C~~~~---~C~~~~g~~~ 247 (721)
++++|+.+||.++++|+++.+ +|+| .|++||+|. +..|++++||..+| |.+++ +|+++.++|+
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGd----------g~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~ 71 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGN----------GTHCEDLDECALVPDICFSTSKVPRCVNTQPGFH 71 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSC----------SSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEE
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCC----------CCCccccccccCCCCcccCCccccceeeccCcee
Confidence 678898899999999999885 5999 999999983 34577999999888 99998 9999999999
Q ss_pred ee-cCCCCccCCCc--------------cCCCCCCC--CCCCCCCcceEecC----CCcEEeCCCCCcc--CCCCc--CC
Q psy17084 248 CE-CTQAWEGSNCQ--------------YDADECQK--SPCVNAALGCTNLV----GDYRCNCSPGWTG--HNCDV--NI 302 (721)
Q Consensus 248 C~-C~~G~~G~~C~--------------~~~~~C~~--~~C~~~~~~C~~~~----g~~~C~C~~G~~G--~~C~~--~~ 302 (721)
|. |++||+|..++ .++++|.. .+|.+. +.|+++. ++|+|.|++||+| ..|+. ++
T Consensus 72 C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~-~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~Di 150 (634)
T 1yo8_A 72 CLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKH-AECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDL 150 (634)
T ss_dssp ECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTT-EEEEECCTTCSSSEEEEECTTEEESSSSEEECTTS
T ss_pred cccCCCCcccCccccccccccccCCCcccccccccCCCcccccC-ccccccccccccceeeeccCCccccCcccccccCc
Confidence 99 99999998764 47899985 589876 7899998 9999999999998 78873 67
Q ss_pred CCCC---CCCCCCCEEeeCCCCeeee---cCCCC
Q psy17084 303 NDCV---GQCRHGSTCIDLVNDFHCA---CLPGY 330 (721)
Q Consensus 303 ~~c~---~~C~~~~~C~~~~~~~~C~---C~~Gy 330 (721)
++|. ..|.. .++|.|. |+.++
T Consensus 151 DeC~~~~~~C~~-------~~~y~C~~dnC~~~p 177 (634)
T 1yo8_A 151 DGWPNLNLVCAT-------NATYHCIKDNCPHLP 177 (634)
T ss_dssp SSSCSSCCTTTT-------TCSSSCSCCSSTTSC
T ss_pred ccccCCCCcccC-------CCCcccccccccccc
Confidence 7775 33542 2456665 66643
No 22
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.57 E-value=4.2e-15 Score=160.78 Aligned_cols=199 Identities=23% Similarity=0.518 Sum_probs=135.8
Q ss_pred CCCceEeccCCCCCCCcccccCCCCCCCCCCCCCEEecCCCCeeeecCCCcccccccCCCCCCCCceeeCCCCccCCccc
Q psy17084 484 SGGSFKCSCDAGFSGKYCHENINDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYCH 563 (721)
Q Consensus 484 ~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C~ 563 (721)
..|+|.+.++.+|.++.++..+..+ .+.+ .+.|.+.+..|+.-... ....+.|.|++||+|..|+
T Consensus 135 ~nGs~~~~~p~~~~~~~~~~~~~~~---------~~~d-~g~y~~~~~~g~~~~~~-----~~~~~~c~C~~g~~G~~C~ 199 (423)
T 2gy5_A 135 KNGSFIHSVPRHEVPDILEVHLPHA---------QPQD-AGVYSARYIGGNLFTSA-----FTRLIVRRCEAQKWGPECN 199 (423)
T ss_dssp ETTEEEEEECGGGCCSEEEEEETTC---------CGGG-CEEEEEEETTCCGGGCE-----EEEEEECSSCTTEESTTSC
T ss_pred cCCeEeeccCccccCCeEEeccCcC---------CCCC-CCeEeeEECCCcEeccc-----cccccCCcCCCCCCCCCCC
Confidence 4567999999999988765433222 1222 34567777766542110 1224568899999999987
Q ss_pred cCCCCCCCCCCCCCCEEeecCCCeEEeccCCCccCcccccC----------CCCC-CCCCCCCcEEeeCCCCeEEecCCC
Q psy17084 564 ENINDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANNK----------NECE-PNPCKNNGTCIDGHADFTCLCKNG 632 (721)
Q Consensus 564 ~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~----------~~C~-~~~C~~~g~C~~~~~~~~C~C~~G 632 (721)
.. | .||.++|+|++ ++|+|+|++||+|..|+... ++|. ..+|.++++|. .++|+|.|++|
T Consensus 200 ~~---C--~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G 270 (423)
T 2gy5_A 200 HL---C--TACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--PDPYGCSCATG 270 (423)
T ss_dssp EE---C--CCCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE--TTTTEEECCBT
T ss_pred CC---C--CCCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC--CCCCeEEeCCC
Confidence 52 4 37999999987 45799999999999998532 2344 45788889996 57899999999
Q ss_pred CccccccCCC------CCCC-CCCCCCCCeeeecCCCceeeCCCCCCCCccccCccCCCCCCCCCCCCeEeeCCCceeee
Q psy17084 633 WKGKTCTSKN------GHCD-RGTCKHGGTCADLGSSFFCHCPPDWEGTSCHIGKLNACKSNPCKNGGTCVNTGDLYSCI 705 (721)
Q Consensus 633 ~~G~~C~~~~------~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~~C~~~~C~~~~~C~~~~~~~~C~ 705 (721)
|+|.+|+..- ..|. .-+|.++++|.+.. .|.|++||+|..|+... .. ...+ ...+. .-.|.
T Consensus 271 ~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~G~~Ce~~~-~~-~~~~-----~~~~~--~~~~~ 338 (423)
T 2gy5_A 271 WKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQGLQCEREG-IP-RMTP-----KIVDL--PDHIE 338 (423)
T ss_dssp CBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCBSTTSCBCS-SC-CCCC-----EECSC--CSBCC
T ss_pred cccccccCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCcCCCCccCc-cC-CcCc-----ceecC--CCeEE
Confidence 9999997521 1232 12688999998764 39999999999998421 11 1111 12211 22489
Q ss_pred cCCCCccCCcccC
Q psy17084 706 CKEGFVHALLFTR 718 (721)
Q Consensus 706 C~~G~~g~~c~~~ 718 (721)
|++||.|..|..+
T Consensus 339 c~~g~~g~~C~~~ 351 (423)
T 2gy5_A 339 VNSGKFNPICKAS 351 (423)
T ss_dssp EESEEECCEEEEE
T ss_pred eCCCccCCccccc
Confidence 9999999877643
No 23
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.55 E-value=4.1e-15 Score=168.12 Aligned_cols=155 Identities=26% Similarity=0.659 Sum_probs=119.9
Q ss_pred CCCCCCCCCEEecCCCCeeeecCCCcccccccCCCCCCCCceeeCCCCccCCccccCCCCCCC----CCCCCCCEEeecC
Q psy17084 509 KHNPCQNGGTCVDKVNSFQCICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYCHENINDCKH----NPCQNGGTCVDKV 584 (721)
Q Consensus 509 ~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~----~~C~~~g~C~~~~ 584 (721)
.+.+|.++|+|.. .+|.|++||+|..|+ |..++++.... ...|.. .+|.++|+|+..
T Consensus 433 ~s~~Cs~~G~C~~----g~C~C~~Gy~G~~Ce------------c~~~~~~~~~~--~~~C~~~~~~~~Cs~~G~C~~G- 493 (687)
T 3k6s_B 433 DRSLCHGKGFLEC----GICRCDTGYIGKNCE------------CQTQGRSSQEL--EGSCRKDNNSIICSGLGDCVCG- 493 (687)
T ss_dssp CSSTGGGSEEESS----SSEEECSSEESTTSC------------EESSSCCCSGG--GSTTSSSTTSCGGGSSEEEETT-
T ss_pred CCCCCCCCCEEeC----CEeEcCCCCcCCccc------------ccCCcCCcccc--CCCCCCCCCCCcCCCCCEEeCC-
Confidence 5678999999984 379999999999876 23333322110 112432 359999999943
Q ss_pred CCeEEecc------CCCccCcccccCCCCCC---CCCCC--CcEEeeCCCCeEEecCCCCccccccC--CCCCCCCC---
Q psy17084 585 NSFQCICR------DGWEGEICANNKNECEP---NPCKN--NGTCIDGHADFTCLCKNGWKGKTCTS--KNGHCDRG--- 648 (721)
Q Consensus 585 ~~~~C~C~------~G~~G~~C~~~~~~C~~---~~C~~--~g~C~~~~~~~~C~C~~G~~G~~C~~--~~~~C~~~--- 648 (721)
+|.|+ +||+|..|+.+...|.. .+|.+ +|+|+.+ +|.|++||+|..|+. ..+.|...
T Consensus 494 ---~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g----~C~C~~G~~G~~Cec~~~~~~C~~~~g~ 566 (687)
T 3k6s_B 494 ---QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGFEGSACQCERTTEGCLNPRRV 566 (687)
T ss_dssp ---EEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEETT----EEEECTTCCSTTSCSCCSSCTTBCTTCS
T ss_pred ---EEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEECC----EEEcCCCCcCCCCccCCCCCCCCCCCCC
Confidence 89999 99999999877788874 46998 9999953 899999999999983 34677654
Q ss_pred CCCCCCeeeecCCCceeeCCCCCCCCccccCccCCCCCCCCCCCCeEe
Q psy17084 649 TCKHGGTCADLGSSFFCHCPPDWEGTSCHIGKLNACKSNPCKNGGTCV 696 (721)
Q Consensus 649 ~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~~C~~~~C~~~~~C~ 696 (721)
+|.++|+|+. ++|.|++||+|..|+. ...| +++|.+++.|+
T Consensus 567 ~Cs~~G~C~~----g~C~C~~Gy~G~~Ce~--c~~C-~~~C~~~g~Cv 607 (687)
T 3k6s_B 567 ECSGRGRCRC----NVCECHSGYQLPLCQE--CPGC-PSPCGKYISCA 607 (687)
T ss_dssp BTSSSCCBCS----SCBCCSTTCCTTTTCC--CTTS-CCCCTTTHHHH
T ss_pred CCCCCCcCCC----CEEECCCCCcCCCCCC--CCCC-CcccCCCCCCC
Confidence 7999999986 5799999999999983 2467 46899999998
No 24
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.54 E-value=2.4e-15 Score=133.27 Aligned_cols=103 Identities=22% Similarity=0.653 Sum_probs=71.8
Q ss_pred cCCCCCCCCCCCCcEEeeC-CCCeEEecCCCCccccccCC--CCCCCCCCCCCCCeeeecCCCceeeCCCCCC---CCcc
Q psy17084 603 NKNECEPNPCKNNGTCIDG-HADFTCLCKNGWKGKTCTSK--NGHCDRGTCKHGGTCADLGSSFFCHCPPDWE---GTSC 676 (721)
Q Consensus 603 ~~~~C~~~~C~~~g~C~~~-~~~~~C~C~~G~~G~~C~~~--~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~---G~~C 676 (721)
++++|..+||.+ +|++. .++|+|+|++||+|..++.+ .+.|...+|. ++|++ .++|+|+|++||+ |..|
T Consensus 3 dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g~~C 77 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACP--ADCDP-NTQASCECPEGYILDDGFIC 77 (118)
T ss_dssp CCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEEETTTEE
T ss_pred ccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCC--CcccC-CCCeEeECCCCccCCCCCcc
Confidence 456666666653 66666 66666666666666532100 0123444554 67877 4788899999998 7778
Q ss_pred ccCccCCCCC-CCCCCCCeEeeCCCceeeecCCCCccCC
Q psy17084 677 HIGKLNACKS-NPCKNGGTCVNTGDLYSCICKEGFVHAL 714 (721)
Q Consensus 677 ~~~~~~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~g~~ 714 (721)
+ ++++|.. +|| +++|+++.++|+|+|++||+|..
T Consensus 78 ~--dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 78 T--DIDECENGGFC--SGVCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp E--ECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCEE
T ss_pred c--cccccCCCCCC--cCeEEeCCCCEEEECCCCCccCC
Confidence 5 7888876 788 68899999999999999998754
No 25
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.53 E-value=3.7e-15 Score=167.35 Aligned_cols=240 Identities=23% Similarity=0.386 Sum_probs=102.4
Q ss_pred cCCCcEEeCCCCCccCCCCcCCCCCC-CCCCCCCEEeeCCCCeeeecCCCCcCCCcccCCCccCCCCCCCCCEEeeCCCC
Q psy17084 281 LVGDYRCNCSPGWTGHNCDVNINDCV-GQCRHGSTCIDLVNDFHCACLPGYTGRTCQTDINDCESSPCVNGGECVDQVNG 359 (721)
Q Consensus 281 ~~g~~~C~C~~G~~G~~C~~~~~~c~-~~C~~~~~C~~~~~~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~g~C~~~~~~ 359 (721)
....++|.|++||+|.+|+..++.+. .++. .+.+......+.|.|.. .+..|..+...+...++..++.|
T Consensus 275 g~~~g~C~C~~G~~G~~Ce~C~~g~~~~p~~-~~~c~~~~~~~~C~C~~--~~~~C~~d~~~c~~~~~~~gg~C------ 345 (525)
T 4aqs_A 275 GMVHGHCMCRHNTKGLNCELCMDFYHDLPWR-PAEGRNSNACKKCNCNE--HSSSCHFDMAVFLATGNVSGGVC------ 345 (525)
T ss_dssp SCCCCEECCCTTEESSSSCEECTTCCSSCCC-CCBTTBCCCCCCCCCTT--SCSEEEECHHHHHHTTSSCCEEE------
T ss_pred CCcCccccCcCCCcCCCCcCCCCccCCCccC-CCcccCCCcccccccCC--CCCCCCCCcccccccCccCCCcc------
Confidence 34467788888888888887666665 3333 33555555556666653 35555544444444555555554
Q ss_pred ceEecCCCCcCCccCCCCeeeccCCccccccCCCCCCCCCCcCCCCCCCCCCCCCCEEeeCCCceEEecCCCcc--CCCC
Q psy17084 360 FRCICPVGFAGQLCENGGTCVNTGDLYSCICKEGFEGPDCGQDINDCSPQPCYNGGKCVDGVNWFLCECAPGFA--GPDC 437 (721)
Q Consensus 360 ~~C~C~~gy~g~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~--G~~C 437 (721)
+.|..+|.|..|+ .|.+||++..+....... ....|.|...+. +..|
T Consensus 346 --~~C~~g~~G~~Ce--------------~C~~g~~~~~~~~~~~~~---------------~~~~C~C~~~~~~~~~~C 394 (525)
T 4aqs_A 346 --DNCQHNTMGRNCE--------------QCKPFYFQHPERDIRDPN---------------LCEPCTCDPAGSENGGIC 394 (525)
T ss_dssp --ESCCTTEESTTSC--------------EECTTEEECSSSCTTCTT---------------CEEECCCCTTTBSGGGCC
T ss_pred --cCCCCCCCCCCcc--------------cccCcccccCCCCCCCCC---------------CCcCCCCCCCCCCCCccc
Confidence 4677777777765 456666554332111100 011233332221 2222
Q ss_pred cccCcccCCCCCCCCceeeccCCCCCCCCccccCCCccccceeeecCCCceEe-ccCCCCCCCcccccCCCCCCCCCCCC
Q psy17084 438 RININECASNPCGYGKEILTVQSRSRSPAYLCVSNPAYLVARCVSQSGGSFKC-SCDAGFSGKYCHENINDCKHNPCQNG 516 (721)
Q Consensus 438 ~~~~~~C~~~~C~~g~~~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~~~~C-~C~~G~~G~~C~~~~~~C~~~~C~~~ 516 (721)
....+... .+ .... ..|.....| ++| +|++||+|..+. ..+.|...+|.++
T Consensus 395 ~~~~~~~~-~~----------------~~~~---------C~C~~g~~G-~~C~~C~~Gy~G~~c~-~~~~C~~C~C~~~ 446 (525)
T 4aqs_A 395 DGYTDFSV-GL----------------IAGQ---------CRCKLHVEG-ERCDVCKEGFYDLSAE-DPYGCKSCACNPL 446 (525)
T ss_dssp CCSCBGGG-TB----------------CSSC---------CCBCTTEET-TTTCEECTTEECCCTT-STTSSEECCCCTT
T ss_pred cCCCCCCc-CC----------------CCCc---------cCCCCCCCC-CcccCCCCCCcCCCCC-CCCCCccCCCCCC
Confidence 21100000 00 0000 111111112 234 688899988775 4566777777777
Q ss_pred CEEecC----CCCeeeecCCCcccccccCCCCCCCCceeeCCCCccCCccccCCCCCCCCCCCCCCEEeec--CCCeEEe
Q psy17084 517 GTCVDK----VNSFQCICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYCHENINDCKHNPCQNGGTCVDK--VNSFQCI 590 (721)
Q Consensus 517 g~C~~~----~g~~~C~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~--~~~~~C~ 590 (721)
++|.+. ..+++|+|++||+|..|+. |.+||+|... +++.|...+|.+++.+.+. ..+++|+
T Consensus 447 gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~-----------C~~G~~g~~~--~~~~C~~C~C~~~gs~~~~C~~~tG~C~ 513 (525)
T 4aqs_A 447 GTIPGGNPCDSETGYCYCKRLVTGQRCDQ-----------CLPQHWGLSN--DLDGCRPCDCDLGGALNNSCSEDSGQCS 513 (525)
T ss_dssp TBCCSSCCBCTTTCCBCBCTTCCSTTTCC---------------------------------------------------
T ss_pred ceecCCCcccCCCCEEECCCCCcCCCccc-----------CCCCccCCCC--CCCCCcCCCCCCCCccCCccCCCCCeeE
Confidence 666543 2356899999999999976 8999998743 4667877788887766543 2234788
Q ss_pred ccCCCccCccc
Q psy17084 591 CRDGWEGEICA 601 (721)
Q Consensus 591 C~~G~~G~~C~ 601 (721)
|++||+|.+|+
T Consensus 514 C~~G~~G~~Ce 524 (525)
T 4aqs_A 514 CLPHMIGRQCN 524 (525)
T ss_dssp -----------
T ss_pred CCCCCcCCCCC
Confidence 88888888875
No 26
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.52 E-value=6.6e-16 Score=142.98 Aligned_cols=128 Identities=27% Similarity=0.600 Sum_probs=95.0
Q ss_pred cCCCCCCCCCCCCCCEEeecCCCeEEeccCCCccCcccccCCCCCCCCCCCCcEEeeCCCCeEEecCCCCccccccCCCC
Q psy17084 564 ENINDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANNKNECEPNPCKNNGTCIDGHADFTCLCKNGWKGKTCTSKNG 643 (721)
Q Consensus 564 ~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~ 643 (721)
.+|++|+.+||.+ ++|+++.++|+|+|++||+|+.+. .+|++.. ...|.++|.|..|+..++
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~--------------~~C~~~~---~~~C~~~~~g~~C~~~~~ 63 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTK--------------TICIETI---KGTCWQTVIDGRCEININ 63 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTS--------------SBEEECC---CEEEEEEEETTEEEEEEE
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCC--------------CeecCCC---CCcccCCCCCCccccCCC
Confidence 5789999999986 799999999999999999987642 3455432 246667788888876555
Q ss_pred CCCCC-------CCCCCCeeeecCCCceeeCCCCCC---CCccccCccCCCCCCC--CCCCCeEeeCCCceeeecCCCCc
Q psy17084 644 HCDRG-------TCKHGGTCADLGSSFFCHCPPDWE---GTSCHIGKLNACKSNP--CKNGGTCVNTGDLYSCICKEGFV 711 (721)
Q Consensus 644 ~C~~~-------~C~~~~~C~~~~~~~~C~C~~G~~---G~~C~~~~~~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~~ 711 (721)
.|... ....++.|.. -.|.|+|++||+ |..|+ +|++|+.+| |.+ ++|+++.++|+|+|++||+
T Consensus 64 ~c~~~~~C~~~~g~~~g~~C~~--c~~~C~C~~Gy~~~~g~~C~--dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~ 138 (147)
T 2w86_A 64 GATLKSQCCSSLGAAWGSPCTL--CQVDPICGKGYSRIKGTQCE--DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMT 138 (147)
T ss_dssp EEECHHHHHTTTCSEETTTTEE--CCCCTTTCTTEEEEETTEEE--ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCC
T ss_pred ccccCCccccCcCcccCCCccc--CCCcccCCCccccCCCCccC--ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCc
Confidence 44211 1111122221 237899999995 89997 899997544 985 6999999999999999999
Q ss_pred cCC
Q psy17084 712 HAL 714 (721)
Q Consensus 712 g~~ 714 (721)
|+.
T Consensus 139 g~~ 141 (147)
T 2w86_A 139 LDA 141 (147)
T ss_dssp BCT
T ss_pred cCC
Confidence 875
No 27
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.50 E-value=5.2e-15 Score=166.15 Aligned_cols=245 Identities=23% Similarity=0.408 Sum_probs=108.8
Q ss_pred ceeeCCCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCCCCCCCCCCEEeeCCCCeEeecCCCCccCCCccCCCCCCC
Q psy17084 189 PCFNTQADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECVSNPCQNGGTCVDLVDGYKCECTQAWEGSNCQYDADECQK 268 (721)
Q Consensus 189 ~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~ 268 (721)
.++.....++|.|++||+|..|+. .++.+...|+. .+++.+....+.|.|+. .+..|..+...+..
T Consensus 271 ~~~~g~~~g~C~C~~G~~G~~Ce~-----------C~~g~~~~p~~-~~~c~~~~~~~~C~C~~--~~~~C~~d~~~c~~ 336 (525)
T 4aqs_A 271 EEVEGMVHGHCMCRHNTKGLNCEL-----------CMDFYHDLPWR-PAEGRNSNACKKCNCNE--HSSSCHFDMAVFLA 336 (525)
T ss_dssp --CCSCCCCEECCCTTEESSSSCE-----------ECTTCCSSCCC-CCBTTBCCCCCCCCCTT--SCSEEEECHHHHHH
T ss_pred cCCCCCcCccccCcCCCcCCCCcC-----------CCCccCCCccC-CCcccCCCcccccccCC--CCCCCCCCcccccc
Confidence 344445567888888888888875 44556666664 34555555556666653 34555544433333
Q ss_pred CCCCCCCcceEecCCCcEEeCCCCCccCCCCcCCCCCC-CCCCCCCEEeeCCCCeeeecCCCCc--CCCcccCCCccCCC
Q psy17084 269 SPCVNAALGCTNLVGDYRCNCSPGWTGHNCDVNINDCV-GQCRHGSTCIDLVNDFHCACLPGYT--GRTCQTDINDCESS 345 (721)
Q Consensus 269 ~~C~~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~-~~C~~~~~C~~~~~~~~C~C~~Gy~--G~~C~~~~~~C~~~ 345 (721)
.++.+. + .-+.|..+|.|.+|+....... ..+... ........|.|...+. +..|.....
T Consensus 337 ~~~~~g-g--------~C~~C~~g~~G~~Ce~C~~g~~~~~~~~~---~~~~~~~~C~C~~~~~~~~~~C~~~~~----- 399 (525)
T 4aqs_A 337 TGNVSG-G--------VCDNCQHNTMGRNCEQCKPFYFQHPERDI---RDPNLCEPCTCDPAGSENGGICDGYTD----- 399 (525)
T ss_dssp TTSSCC-E--------EEESCCTTEESTTSCEECTTEEECSSSCT---TCTTCEEECCCCTTTBSGGGCCCCSCB-----
T ss_pred cCccCC-C--------cccCCCCCCCCCCcccccCcccccCCCCC---CCCCCCcCCCCCCCCCCCCccccCCCC-----
Confidence 333222 2 2246788888877763222111 000000 0011122344444332 233321100
Q ss_pred CCCCCCEEeeCCCCceEecCCCCcCCccCCCCeeeccCCccccccCCCCCCCCCCcCCCCCCCCCCCCCCEEeeC----C
Q psy17084 346 PCVNGGECVDQVNGFRCICPVGFAGQLCENGGTCVNTGDLYSCICKEGFEGPDCGQDINDCSPQPCYNGGKCVDG----V 421 (721)
Q Consensus 346 ~C~~~g~C~~~~~~~~C~C~~gy~g~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~----~ 421 (721)
.........|.|.++|.|..|+ +|++||+|..+. ....|.+.+|.++++|.+. .
T Consensus 400 -------~~~~~~~~~C~C~~g~~G~~C~--------------~C~~Gy~G~~c~-~~~~C~~C~C~~~gtc~~~~~Cd~ 457 (525)
T 4aqs_A 400 -------FSVGLIAGQCRCKLHVEGERCD--------------VCKEGFYDLSAE-DPYGCKSCACNPLGTIPGGNPCDS 457 (525)
T ss_dssp -------GGGTBCSSCCCBCTTEETTTTC--------------EECTTEECCCTT-STTSSEECCCCTTTBCCSSCCBCT
T ss_pred -------CCcCCCCCccCCCCCCCCCccc--------------CCCCCCcCCCCC-CCCCCccCCCCCCceecCCCcccC
Confidence 0111123467888888887775 689999998876 4556777777777666542 2
Q ss_pred CceEEecCCCccCCCCcccCcccCCCCCCCCceeeccCCCCCCCCccccCCCccccceeeecCCCceEeccCCCCCCCcc
Q psy17084 422 NWFLCECAPGFAGPDCRININECASNPCGYGKEILTVQSRSRSPAYLCVSNPAYLVARCVSQSGGSFKCSCDAGFSGKYC 501 (721)
Q Consensus 422 g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~g~~~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~~~~C~C~~G~~G~~C 501 (721)
.+++|.|++||+|..|+ +|.+||+|...
T Consensus 458 ~tg~C~C~~g~~G~~Ce----------------------------------------------------~C~~G~~g~~~ 485 (525)
T 4aqs_A 458 ETGYCYCKRLVTGQRCD----------------------------------------------------QCLPQHWGLSN 485 (525)
T ss_dssp TTCCBCBCTTCCSTTTC----------------------------------------------------C----------
T ss_pred CCCEEECCCCCcCCCcc----------------------------------------------------cCCCCccCCCC
Confidence 34589999999998885 36677776542
Q ss_pred cccCCCCCCCCCCCCCEEecC--CCCeeeecCCCccccccc
Q psy17084 502 HENINDCKHNPCQNGGTCVDK--VNSFQCICRDGWEGEICA 540 (721)
Q Consensus 502 ~~~~~~C~~~~C~~~g~C~~~--~g~~~C~C~~G~~G~~C~ 540 (721)
++++|.+.+|.+++.+... ..+++|+|++||+|..|+
T Consensus 486 --~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 486 --DLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp -----------------------------------------
T ss_pred --CCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence 4677888888888776543 234478888888888775
No 28
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.49 E-value=5.2e-15 Score=131.07 Aligned_cols=102 Identities=27% Similarity=0.750 Sum_probs=86.2
Q ss_pred cCCCCCCCCCCCCCCEEeec-CCCeEEeccCCCccCcccccCCC----CCCCCCCCCcEEeeCCCCeEEecCCCCc---c
Q psy17084 564 ENINDCKHNPCQNGGTCVDK-VNSFQCICRDGWEGEICANNKNE----CEPNPCKNNGTCIDGHADFTCLCKNGWK---G 635 (721)
Q Consensus 564 ~~~~~C~~~~C~~~g~C~~~-~~~~~C~C~~G~~G~~C~~~~~~----C~~~~C~~~g~C~~~~~~~~C~C~~G~~---G 635 (721)
.+|++|..+||.+ +|++. .++|+|+|++||+|...+ +++ |...+|. ++|++ .++|+|+|++||+ |
T Consensus 2 ~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~--~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g 74 (118)
T 1dx5_I 2 EPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHE--PHRCQMFCNQTACP--ADCDP-NTQASCECPEGYILDDG 74 (118)
T ss_dssp CCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTE--EEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEEETT
T ss_pred CccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCC--CCccccccCCCCCC--CcccC-CCCeEeECCCCccCCCC
Confidence 4789999999984 99999 899999999999998542 233 4455565 78988 5899999999999 8
Q ss_pred ccccCCCCCCCC-CCCCCCCeeeecCCCceeeCCCCCCCCc
Q psy17084 636 KTCTSKNGHCDR-GTCKHGGTCADLGSSFFCHCPPDWEGTS 675 (721)
Q Consensus 636 ~~C~~~~~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~G~~ 675 (721)
..|+ ++++|.. ++| +++|+++.++|+|+|++||+|..
T Consensus 75 ~~C~-dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 75 FICT-DIDECENGGFC--SGVCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp TEEE-ECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCEE
T ss_pred Cccc-cccccCCCCCC--cCeEEeCCCCEEEECCCCCccCC
Confidence 8994 7888987 889 78999999999999999999754
No 29
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.48 E-value=1e-15 Score=141.79 Aligned_cols=135 Identities=24% Similarity=0.563 Sum_probs=75.2
Q ss_pred ccCCCCCCCCCCCCCEEecCCCCeeeecCCCcccccccCCCCCCCCceeeCCCCccCCccccCCCCCCCCCCCCCCEEee
Q psy17084 503 ENINDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYCHENINDCKHNPCQNGGTCVD 582 (721)
Q Consensus 503 ~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~ 582 (721)
++||+|..+||.+ |+|+++.++|+|+|++||+|..+...+.... ...|..+|.|..|+.++++|.. ++.|.+
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~--~~~C~~~~~g~~C~~~~~~c~~-----~~~C~~ 73 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETI--KGTCWQTVIDGRCEININGATL-----KSQCCS 73 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEECC--CEEEEEEEETTEEEEEEEEEEC-----HHHHHT
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecCCC--CCcccCCCCCCccccCCCcccc-----CCcccc
Confidence 5799999999985 7999999999999999999875432221111 1233344444444433332211 011111
Q ss_pred cCCCeEEeccCCCccCcccccCCCCCCCCCCCCcEEeeCCCCeEEecCCCCc---cccccCCCCCCCCC--CCCCCCeee
Q psy17084 583 KVNSFQCICRDGWEGEICANNKNECEPNPCKNNGTCIDGHADFTCLCKNGWK---GKTCTSKNGHCDRG--TCKHGGTCA 657 (721)
Q Consensus 583 ~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~---G~~C~~~~~~C~~~--~C~~~~~C~ 657 (721)
..++ ..++.|. .-.|+|+|++||+ |..|+ ++++|... +|.+ ++|+
T Consensus 74 ~~g~--------------------------~~g~~C~--~c~~~C~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~ 123 (147)
T 2w86_A 74 SLGA--------------------------AWGSPCT--LCQVDPICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCV 123 (147)
T ss_dssp TTCS--------------------------EETTTTE--ECCCCTTTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEE
T ss_pred CcCc--------------------------ccCCCcc--cCCCcccCCCccccCCCCccC-ccccccCCCCCCCC-CEEE
Confidence 1111 0001111 0125666777773 66665 56666533 3664 4677
Q ss_pred ecCCCceeeCCCCCCCCc
Q psy17084 658 DLGSSFFCHCPPDWEGTS 675 (721)
Q Consensus 658 ~~~~~~~C~C~~G~~G~~ 675 (721)
++.++|+|+|++||+|+.
T Consensus 124 n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 124 NTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp EETTEEEEECCTTCCBCT
T ss_pred CCCCCEEeeCCCCCccCC
Confidence 777777777777776653
No 30
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.48 E-value=2.8e-14 Score=119.76 Aligned_cols=85 Identities=24% Similarity=0.554 Sum_probs=53.3
Q ss_pred ceeeCCCCccCCccccCCCCCCCCCCCCCCEEeecCCCeEEeccCCCccCccc-ccCCCCCCCCCCCCcEEeeCC--CCe
Q psy17084 549 FKCSCDAGFSGKYCHENINDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICA-NNKNECEPNPCKNNGTCIDGH--ADF 625 (721)
Q Consensus 549 ~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~-~~~~~C~~~~C~~~g~C~~~~--~~~ 625 (721)
|.|+|.+||.|..|+ +++|...||.+ ..++|+|+|++||+ .|+ .++++|.++||.++|+|++.. ++|
T Consensus 2 y~C~C~~g~~g~~c~--~~~c~~~pC~n------~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~ 71 (91)
T 1tpg_A 2 YQVICRDEKTQMIYQ--QHQSWLRPVLR------SNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDF 71 (91)
T ss_dssp CCCCCBCSSSCCBCC--SSCEEEEECSS------SSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCE
T ss_pred eeeECCCCCcCCeEC--CCcccCCcccc------CCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCe
Confidence 455555555555552 45555545443 35567777777776 665 456677777777777777665 667
Q ss_pred EEecCCCCccccccCCCC
Q psy17084 626 TCLCKNGWKGKTCTSKNG 643 (721)
Q Consensus 626 ~C~C~~G~~G~~C~~~~~ 643 (721)
+|+|++||+|.+|+.+++
T Consensus 72 ~C~C~~G~~G~~Ce~~id 89 (91)
T 1tpg_A 72 VCQCPEGFAGKSCEIDTR 89 (91)
T ss_dssp EEECCTTCBSSSCCBCSS
T ss_pred EeECCCCCcCCcCCcCCC
Confidence 777777777777765544
No 31
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.46 E-value=3.2e-14 Score=119.43 Aligned_cols=82 Identities=32% Similarity=0.690 Sum_probs=50.5
Q ss_pred CeEEeccCCCccCcccccCCCCCCCCCCCCcEEeeCCCCeEEecCCCCcccccc-CCCCCCCCCCCCCCCeeeecC--CC
Q psy17084 586 SFQCICRDGWEGEICANNKNECEPNPCKNNGTCIDGHADFTCLCKNGWKGKTCT-SKNGHCDRGTCKHGGTCADLG--SS 662 (721)
Q Consensus 586 ~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~-~~~~~C~~~~C~~~~~C~~~~--~~ 662 (721)
+|+|+|.+||+|..|+ +++|...||.+ ..++|+|+|++||+ .|+ .++++|.++||.++|+|++.. ++
T Consensus 1 sy~C~C~~g~~g~~c~--~~~c~~~pC~n------~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~ 70 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQ--QHQSWLRPVLR------SNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSD 70 (91)
T ss_dssp CCCCCCBCSSSCCBCC--SSCEEEEECSS------SSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSC
T ss_pred CeeeECCCCCcCCeEC--CCcccCCcccc------CCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCC
Confidence 4666677777766663 45555544433 34566666666665 665 355666666666666666655 66
Q ss_pred ceeeCCCCCCCCccc
Q psy17084 663 FFCHCPPDWEGTSCH 677 (721)
Q Consensus 663 ~~C~C~~G~~G~~C~ 677 (721)
|+|+|++||+|..|+
T Consensus 71 ~~C~C~~G~~G~~Ce 85 (91)
T 1tpg_A 71 FVCQCPEGFAGKSCE 85 (91)
T ss_dssp EEEECCTTCBSSSCC
T ss_pred eEeECCCCCcCCcCC
Confidence 666666666666666
No 32
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.42 E-value=7e-14 Score=158.10 Aligned_cols=132 Identities=27% Similarity=0.693 Sum_probs=109.5
Q ss_pred CCCCCCCCCEEeecCCCeEEeccCCCccCcccccCC---------CCCCC----CCCCCcEEeeCCCCeEEecC------
Q psy17084 570 KHNPCQNGGTCVDKVNSFQCICRDGWEGEICANNKN---------ECEPN----PCKNNGTCIDGHADFTCLCK------ 630 (721)
Q Consensus 570 ~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~---------~C~~~----~C~~~g~C~~~~~~~~C~C~------ 630 (721)
.+++|.++|+|+. ++|.|++||+|..|+..++ .|... +|.++|+|+.+ +|.|+
T Consensus 433 ~s~~Cs~~G~C~~----g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G----~C~C~~~~~~~ 504 (687)
T 3k6s_B 433 DRSLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPG 504 (687)
T ss_dssp CSSTGGGSEEESS----SSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETT----EEEECCCCSTT
T ss_pred CCCCCCCCCEEeC----CEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCC----EEEcCCCCCCC
Confidence 5668999999984 3799999999999985443 57653 49999999943 99999
Q ss_pred CCCccccccCCCCCCCC---CCCCC--CCeeeecCCCceeeCCCCCCCCccccC-ccCCCCCC---CCCCCCeEeeCCCc
Q psy17084 631 NGWKGKTCTSKNGHCDR---GTCKH--GGTCADLGSSFFCHCPPDWEGTSCHIG-KLNACKSN---PCKNGGTCVNTGDL 701 (721)
Q Consensus 631 ~G~~G~~C~~~~~~C~~---~~C~~--~~~C~~~~~~~~C~C~~G~~G~~C~~~-~~~~C~~~---~C~~~~~C~~~~~~ 701 (721)
+||+|..|+.+...|.. .+|.+ +|+|.. .+|.|++||+|..|++. .++.|..+ +|.++|+|+.
T Consensus 505 ~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~---- 576 (687)
T 3k6s_B 505 KLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC---- 576 (687)
T ss_dssp CCEESTTSCEESSCSCEETTEETSHHHHEEEET----TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS----
T ss_pred CCccccccccccccccCCCCcCcCCCCCCeEEC----CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC----
Confidence 99999999877777874 36988 899984 37999999999999953 36788764 7999999986
Q ss_pred eeeecCCCCccCCccc
Q psy17084 702 YSCICKEGFVHALLFT 717 (721)
Q Consensus 702 ~~C~C~~G~~g~~c~~ 717 (721)
++|+|++||+|..|+.
T Consensus 577 g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 577 NVCECHSGYQLPLCQE 592 (687)
T ss_dssp SCBCCSTTCCTTTTCC
T ss_pred CEEECCCCCcCCCCCC
Confidence 4799999999999986
No 33
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.33 E-value=1.1e-12 Score=107.83 Aligned_cols=72 Identities=36% Similarity=0.950 Sum_probs=63.9
Q ss_pred ccCCCCCCCCCCCCCCCEeccCCCCceeEeCCCCCc--cCccCCCCCCCC-CCCCCCCCeeeecCCceEEecCCCCCCC
Q psy17084 7 LSDLNYCGTHEPCQNGGTCENTAPDQYLCTCPEGFS--GINCEVVDNPCM-MGPCGNGGQCKETAGQFQCVCAPGWTGP 82 (721)
Q Consensus 7 ~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~--G~~C~~~~~~C~-~~~C~~~g~C~~~~g~~~C~C~~Gy~G~ 82 (721)
.+|||+|...+||.+ |+|++ .+++|+|.|++||+ |..|+ ++++|. ..||.+ ++|+++.|+|+|.|++||+|+
T Consensus 2 C~dideC~~~~~C~~-g~C~n-~~g~y~C~C~~Gy~~~g~~C~-dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 2 AVDMDECKEPDVCKH-GQCIN-TDGSYRCECPFGYILAGNECV-DTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPG 76 (82)
T ss_dssp CCCCCSSSSTTSCSS-SEECC-CSSCCCEECCTTEEEETTEEE-ECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCC
T ss_pred CCccccCCCCCCcCC-CEEEe-cCCCEEEECCCCeECCCCccC-CcccccCCCCCCC-CEeECCCCCEEeECCCCeEeC
Confidence 468999986589975 99999 57899999999997 99996 789997 789986 799999999999999999975
No 34
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.29 E-value=8.9e-13 Score=123.35 Aligned_cols=136 Identities=32% Similarity=0.741 Sum_probs=97.1
Q ss_pred CCCCCCEEeeCC--CCceE-ecCCCCcCCccCCCCeeeccCCccccccCCCCCCCCCCc--CCCCCCCCCCCCC------
Q psy17084 346 PCVNGGECVDQV--NGFRC-ICPVGFAGQLCENGGTCVNTGDLYSCICKEGFEGPDCGQ--DINDCSPQPCYNG------ 414 (721)
Q Consensus 346 ~C~~~g~C~~~~--~~~~C-~C~~gy~g~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~--~~~~C~~~~C~~~------ 414 (721)
||.++++|+... +.++| .|+++|+|..|+ .|++||+|..+.. ....|.+-.|.++
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce--------------~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~ 67 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE--------------LCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAV 67 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSC--------------EECTTEEEETTCTTSSCEEEEECCSTTCBCTTCS
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc--------------CCCCCCcCCcccccCCCCCCeeCcCCCCCCcccC
Confidence 577778887655 46788 688888888887 5888888865531 1234444456554
Q ss_pred CEEeeCCCceEEe-cCCCccCCCCcccCcccCCCCCCCCceeeccCCCCCCCCccccCCCccccceeeecCCCceEeccC
Q psy17084 415 GKCVDGVNWFLCE-CAPGFAGPDCRININECASNPCGYGKEILTVQSRSRSPAYLCVSNPAYLVARCVSQSGGSFKCSCD 493 (721)
Q Consensus 415 g~C~~~~g~~~C~-C~~Gy~G~~C~~~~~~C~~~~C~~g~~~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~~~~C~C~ 493 (721)
++|....+ +|. |+++|+|..|+ +|+
T Consensus 68 ~~C~~~tG--~C~~C~~g~~G~~Ce----------------------------------------------------~C~ 93 (162)
T 1klo_A 68 GNCNRLTG--ECLKCIYNTAGFYCD----------------------------------------------------RCK 93 (162)
T ss_dssp CCBCTTTC--CBCCBCTTEETTTTC----------------------------------------------------EEC
T ss_pred CcccCCCC--cccCCCCCCcCCCcC----------------------------------------------------cCc
Confidence 46754444 894 99999999886 367
Q ss_pred CCCCCCccc-ccCCCCCCCCCCCCC------EEecCCCCeeeecCCCcccccccCCCCCCCCceeeCCCCccCCcc
Q psy17084 494 AGFSGKYCH-ENINDCKHNPCQNGG------TCVDKVNSFQCICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYC 562 (721)
Q Consensus 494 ~G~~G~~C~-~~~~~C~~~~C~~~g------~C~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C 562 (721)
+||+|..+. ...+.|.+-+|.+.+ +|....| +|+|++||+|..|+. |.+||+|...
T Consensus 94 ~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG--~C~C~~g~~G~~Cd~-----------C~~g~~g~~~ 156 (162)
T 1klo_A 94 EGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTG--QCQCLPHVSGRDCGT-----------CDPGYYNLQS 156 (162)
T ss_dssp TTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTC--CCCBCTTEESTTCCE-----------ECTTCBCGGG
T ss_pred hhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCC--EeECCCCCcCCCCCC-----------CCCCcccCCC
Confidence 788877665 233456666676654 7876554 899999999999986 9999998764
No 35
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.25 E-value=2.5e-12 Score=118.05 Aligned_cols=80 Identities=31% Similarity=0.797 Sum_probs=60.8
Q ss_pred ceeeccCCCCCCCCCCCCCCCEeccCCCCceeEeCCCCCccCccCCCCCCCCCCCCCCCCee-eecCCceEEecCCCCC-
Q psy17084 3 LFRLLSDLNYCGTHEPCQNGGTCENTAPDQYLCTCPEGFSGINCEVVDNPCMMGPCGNGGQC-KETAGQFQCVCAPGWT- 80 (721)
Q Consensus 3 ~~~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C-~~~~g~~~C~C~~Gy~- 80 (721)
++...+|||+|.+ +||+++|+|++ .+++|+|.|++||+|..|+. +++|...+....++| +++.|+|+|.|++||+
T Consensus 41 ~~~~c~dideC~~-~pC~n~g~C~~-~~~~y~C~C~~G~~G~~C~~-~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l 117 (146)
T 1x7a_L 41 FWKQYVDGDQCEP-NPCLNGGLCKD-DINSYECWCQVGFEGKNCEL-DATCNIKNGRCKQFCKTGADSKVLCSCTTGYRL 117 (146)
T ss_dssp ---------CCSS-CSSCTTCEEEE-CSSCEEEECCSSEESTTTCE-ECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEE
T ss_pred hhccCCCcCcCCC-CCCCCCCEeEC-CCCCEEEecCCCCcCCcCCC-CccccCCCCCCcCCCCCCCCCCEEeEcCCCcEe
Confidence 5778899999997 99999999999 57899999999999999984 589987543323499 9999999999999999
Q ss_pred ---CCccC
Q psy17084 81 ---GPTCK 85 (721)
Q Consensus 81 ---G~~C~ 85 (721)
|..|+
T Consensus 118 ~~dG~~C~ 125 (146)
T 1x7a_L 118 APDQKSCK 125 (146)
T ss_dssp CTTSSSEE
T ss_pred CCCCCcCC
Confidence 66664
No 36
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.25 E-value=2.1e-12 Score=120.77 Aligned_cols=125 Identities=29% Similarity=0.713 Sum_probs=82.7
Q ss_pred CCCCCCEEeeCC--CceEE-ecCCCccCCCCcccCcccCCCCCCCCceeeccCCCCCCCCccccCCCccccceeeecCCC
Q psy17084 410 PCYNGGKCVDGV--NWFLC-ECAPGFAGPDCRININECASNPCGYGKEILTVQSRSRSPAYLCVSNPAYLVARCVSQSGG 486 (721)
Q Consensus 410 ~C~~~g~C~~~~--g~~~C-~C~~Gy~G~~C~~~~~~C~~~~C~~g~~~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~ 486 (721)
||.++++|+... +.++| .|++||+|..|+.
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~----------------------------------------------- 34 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL----------------------------------------------- 34 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSCE-----------------------------------------------
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC-----------------------------------------------
Confidence 588899998765 57899 7999999999972
Q ss_pred ceEeccCCCCCCCcccc--cCCCCCCCCCCCC------CEEecCCCCeeee-cCCCcccccccCCCCCCCCceeeCCCCc
Q psy17084 487 SFKCSCDAGFSGKYCHE--NINDCKHNPCQNG------GTCVDKVNSFQCI-CRDGWEGEICANSNQSGGSFKCSCDAGF 557 (721)
Q Consensus 487 ~~~C~C~~G~~G~~C~~--~~~~C~~~~C~~~------g~C~~~~g~~~C~-C~~G~~G~~C~~~~~~~~~~~C~C~~G~ 557 (721)
|++||+|..+.. ....|.+-.|.++ +.|....| +|+ |+++|+|..|+. |++||
T Consensus 35 -----C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG--~C~~C~~g~~G~~Ce~-----------C~~Gy 96 (162)
T 1klo_A 35 -----CDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTG--ECLKCIYNTAGFYCDR-----------CKEGF 96 (162)
T ss_dssp -----ECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTC--CBCCBCTTEETTTTCE-----------ECTTE
T ss_pred -----CCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCC--cccCCCCCCcCCCcCc-----------Cchhh
Confidence 334444332210 0112222233333 45654444 895 999999999986 99999
Q ss_pred cCCccc-cCCCCCCCCCCCCCC------EEeecCCCeEEeccCCCccCccc
Q psy17084 558 SGKYCH-ENINDCKHNPCQNGG------TCVDKVNSFQCICRDGWEGEICA 601 (721)
Q Consensus 558 ~G~~C~-~~~~~C~~~~C~~~g------~C~~~~~~~~C~C~~G~~G~~C~ 601 (721)
+|..+. ...+.|..-+|.+.+ +|....+ +|+|++||+|.+|+
T Consensus 97 ~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG--~C~C~~g~~G~~Cd 145 (162)
T 1klo_A 97 FGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTG--QCQCLPHVSGRDCG 145 (162)
T ss_dssp EECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTC--CCCBCTTEESTTCC
T ss_pred cCCccccCCCCCCeeccCCCCCccCCCCCCCCCCC--EeECCCCCcCCCCC
Confidence 998875 223445555566644 6765443 78888888888874
No 37
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.25 E-value=3.9e-12 Score=104.56 Aligned_cols=73 Identities=38% Similarity=0.997 Sum_probs=63.0
Q ss_pred eeccCCCCCC-CCCCCCCceeeCCCCeEeeCCCCCc--cCcCCCCCccCCCCCCCCCCCCC-CCCCCCCCEEeeCCCCeE
Q psy17084 172 QCVDHDHCNP-NPCLNGAPCFNTQADYYCHCTEDWE--GKNCSFPRYKCDNPPCDDIDECV-SNPCQNGGTCVDLVDGYK 247 (721)
Q Consensus 172 ~C~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~--G~~C~~~~~~c~~~~C~~~~~C~-~~~C~~~~~C~~~~g~~~ 247 (721)
+|+|+|+|+. ++|.+ ++|+++.++|+|.|++||+ |.. |++||+|. .+||.+ ++|+++.++|+
T Consensus 1 sC~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~------------C~dideC~~~~~C~~-~~C~n~~g~y~ 66 (82)
T 1emn_A 1 SAVDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNE------------CVDTDECSVGNPCGN-GTCKNVIGGFE 66 (82)
T ss_dssp CCCCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTE------------EEECCGGGTCCTTSS-SCEEECSSSEE
T ss_pred CCCccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCc------------cCCcccccCCCCCCC-CEeECCCCCEE
Confidence 3678999985 88975 8999999999999999998 544 45899997 789985 69999999999
Q ss_pred eecCCCCccCC
Q psy17084 248 CECTQAWEGSN 258 (721)
Q Consensus 248 C~C~~G~~G~~ 258 (721)
|+|++||+|..
T Consensus 67 C~C~~G~~g~~ 77 (82)
T 1emn_A 67 CTCEEGFEPGP 77 (82)
T ss_dssp ECCSSSSCCCS
T ss_pred eECCCCeEeCC
Confidence 99999999863
No 38
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.23 E-value=2.5e-12 Score=107.00 Aligned_cols=81 Identities=36% Similarity=0.837 Sum_probs=67.3
Q ss_pred cCCCCCCCC--CCCCCceeeCCCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCCCCCCCCCCEEeeCCCCeEeecCC
Q psy17084 175 DHDHCNPNP--CLNGAPCFNTQADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECVSNPCQNGGTCVDLVDGYKCECTQ 252 (721)
Q Consensus 175 ~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~ 252 (721)
++|||+.+| | ++++|+++.++|+|.|++||++.. ++..|++||||..+||. ++|+++.++|+|+|+
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~--------~g~~C~dideC~~~~C~--~~C~n~~g~y~C~C~- 69 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNL--------KSKSCEDIDECSENMCA--QLCVNYPGGYTCYCD- 69 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEET--------TTTEEECCCHHHHSCCS--SEECCCSSSCCEECC-
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECC--------CCCcCCCcCeeCCCCCC--CEEEccCCCEEEECC-
Confidence 688898777 8 789999999999999999999542 33456699999989997 699999999999998
Q ss_pred CCccCCCccCCCCCC
Q psy17084 253 AWEGSNCQYDADECQ 267 (721)
Q Consensus 253 G~~G~~C~~~~~~C~ 267 (721)
||.|..++.+...|.
T Consensus 70 g~~G~~~~~~~~~C~ 84 (87)
T 1z6c_A 70 GKKGFKLAQDQKSCE 84 (87)
T ss_dssp SSSCCBCCTTSSSCB
T ss_pred CCcCCcccCCCCcce
Confidence 888877776666554
No 39
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.22 E-value=4.1e-12 Score=105.53 Aligned_cols=70 Identities=37% Similarity=0.987 Sum_probs=60.7
Q ss_pred cCCCCCCCCCC--CCCCCEeccCCCCceeEeCCCCCc-----cCccCCCCCCCCCCC--CCCCCeeeecCCceEEecCCC
Q psy17084 8 SDLNYCGTHEP--CQNGGTCENTAPDQYLCTCPEGFS-----GINCEVVDNPCMMGP--CGNGGQCKETAGQFQCVCAPG 78 (721)
Q Consensus 8 ~~~~~C~~~~~--C~~~g~C~~~~~~~~~C~C~~G~~-----G~~C~~~~~~C~~~~--C~~~g~C~~~~g~~~C~C~~G 78 (721)
+|||||+. +| |.+ ++|++ .+++|+|.|++||+ |..|+ +++||...| |. +++|+++.|+|+|.|++|
T Consensus 1 ~dideC~~-~~~~C~~-g~C~n-~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G 75 (86)
T 1lmj_A 1 TDIDECRI-SPDLCGR-GQCVN-TPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPG 75 (86)
T ss_dssp CCCCTTTT-CSSTTTT-SCEEE-ETTEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTT
T ss_pred CccccccC-CCCCCCC-CEEEC-CCCCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCC
Confidence 48999987 55 965 69999 57899999999998 78897 789998777 65 589999999999999999
Q ss_pred CCCC
Q psy17084 79 WTGP 82 (721)
Q Consensus 79 y~G~ 82 (721)
|++.
T Consensus 76 ~~~~ 79 (86)
T 1lmj_A 76 HQLS 79 (86)
T ss_dssp SCCC
T ss_pred cccC
Confidence 9875
No 40
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.22 E-value=9e-12 Score=109.47 Aligned_cols=74 Identities=30% Similarity=0.623 Sum_probs=58.5
Q ss_pred ccCCCCCCCCCC--------CCCCCEeccCCCCceeEeCCCCCccCccCCCC--CCCCCCCCCCCCeeeecCCceEEecC
Q psy17084 7 LSDLNYCGTHEP--------CQNGGTCENTAPDQYLCTCPEGFSGINCEVVD--NPCMMGPCGNGGQCKETAGQFQCVCA 76 (721)
Q Consensus 7 ~~~~~~C~~~~~--------C~~~g~C~~~~~~~~~C~C~~G~~G~~C~~~~--~~C~~~~C~~~g~C~~~~g~~~C~C~ 76 (721)
.+|+|+|+. +| |.++|+|++ ..++|+|.|++||+|..|+.++ ++|...+.+..++|+++.++|+|.|+
T Consensus 3 ~~d~d~C~~-~p~~~~C~~~C~~~g~C~~-~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~ 80 (114)
T 1aut_L 3 HVDGDQCLV-LPLEHPCASLCCGHGTCID-GIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCA 80 (114)
T ss_dssp -----CCCC-CSSCCSSSSTTTTSEEECC-CSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECC
T ss_pred ceecccccC-CCccccccccCCCcCCCCC-CCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECC
Confidence 478999998 88 999999998 5789999999999999998654 37875433333499999999999999
Q ss_pred CCCCCC
Q psy17084 77 PGWTGP 82 (721)
Q Consensus 77 ~Gy~G~ 82 (721)
+||+|.
T Consensus 81 ~G~~~~ 86 (114)
T 1aut_L 81 PGYKLG 86 (114)
T ss_dssp TTEEEC
T ss_pred CCeeEC
Confidence 999954
No 41
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.20 E-value=2.4e-12 Score=122.98 Aligned_cols=80 Identities=39% Similarity=0.936 Sum_probs=27.9
Q ss_pred cceeeccCCCCCCCCCCCCCCCEeccCCCCceeEeCCCCCccCccCCCC-CCCCCC--CCCCCCeeeecCCceEEecCCC
Q psy17084 2 SLFRLLSDLNYCGTHEPCQNGGTCENTAPDQYLCTCPEGFSGINCEVVD-NPCMMG--PCGNGGQCKETAGQFQCVCAPG 78 (721)
Q Consensus 2 ~~~~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~C~~~~-~~C~~~--~C~~~g~C~~~~g~~~C~C~~G 78 (721)
.|+...+|+|+|.+ +||+++|+|++ ..++|+|.|++||+|..|+.++ ++|... +|.+ +|+++.|+|+|.|++|
T Consensus 34 ~fw~~c~dideC~~-~pC~ngg~C~n-~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~G 109 (195)
T 1nfu_B 34 EFWNKYKDGDQCET-SPCQNQGKCKD-GLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARG 109 (195)
T ss_dssp -------------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTT
T ss_pred cccccCCCCcccCC-CCCCCCCEeEC-CCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCC
Confidence 36677899999997 99999999998 5789999999999999999766 889764 4654 9999999999999999
Q ss_pred CC----CCccC
Q psy17084 79 WT----GPTCK 85 (721)
Q Consensus 79 y~----G~~C~ 85 (721)
|+ |..|+
T Consensus 110 y~l~~dG~~C~ 120 (195)
T 1nfu_B 110 YTLADNGKACI 120 (195)
T ss_dssp EEECTTSSCEE
T ss_pred ceeCCCCCccc
Confidence 99 77775
No 42
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.18 E-value=7.4e-12 Score=104.17 Aligned_cols=71 Identities=31% Similarity=0.842 Sum_probs=61.6
Q ss_pred cCCCCCCCCCC--CCCCCEeccCCCCceeEeCCCCCc----cCccCCCCCCCCCCCCCCCCeeeecCCceEEecCCCCCC
Q psy17084 8 SDLNYCGTHEP--CQNGGTCENTAPDQYLCTCPEGFS----GINCEVVDNPCMMGPCGNGGQCKETAGQFQCVCAPGWTG 81 (721)
Q Consensus 8 ~~~~~C~~~~~--C~~~g~C~~~~~~~~~C~C~~G~~----G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~G 81 (721)
+|||||.. +| | ++++|++ .+++|+|.|++||+ |..|+ ++++|...||. ++|+++.|+|+|.|+ ||.|
T Consensus 1 ~dideC~~-~~~~C-~~~~C~n-~~g~y~C~C~~G~~~~~~g~~C~-dideC~~~~C~--~~C~n~~g~y~C~C~-g~~G 73 (87)
T 1z6c_A 1 KDVDECSL-KPSIC-GTAVCKN-IPGDFECECPEGYRYNLKSKSCE-DIDECSENMCA--QLCVNYPGGYTCYCD-GKKG 73 (87)
T ss_dssp CCSCSSSS-SSSSB-TTSSCCC-BTTBCCCSSSTTCEEETTTTEEE-CCCHHHHSCCS--SEECCCSSSCCEECC-SSSC
T ss_pred CccccccC-CCCCC-CCCEeEC-CCCCEEEECCCCceECCCCCcCC-CcCeeCCCCCC--CEEEccCCCEEEECC-CCcC
Confidence 48999988 66 9 8899999 57899999999998 88996 78999888997 799999999999997 7766
Q ss_pred CccC
Q psy17084 82 PTCK 85 (721)
Q Consensus 82 ~~C~ 85 (721)
..++
T Consensus 74 ~~~~ 77 (87)
T 1z6c_A 74 FKLA 77 (87)
T ss_dssp CBCC
T ss_pred Cccc
Confidence 5553
No 43
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.17 E-value=4e-12 Score=115.12 Aligned_cols=79 Identities=39% Similarity=0.947 Sum_probs=27.6
Q ss_pred ceeeccCCCCCCCCCCCCCCCEeccCCCCceeEeCCCCCccCccCCCC-CCCCCC--CCCCCCeeeecCCceEEecCCCC
Q psy17084 3 LFRLLSDLNYCGTHEPCQNGGTCENTAPDQYLCTCPEGFSGINCEVVD-NPCMMG--PCGNGGQCKETAGQFQCVCAPGW 79 (721)
Q Consensus 3 ~~~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~C~~~~-~~C~~~--~C~~~g~C~~~~g~~~C~C~~Gy 79 (721)
++...+|+|+|.+ +||+++|+|++ ..++|+|.|++||+|..|+.++ ++|... +|.+ +|+++.|+|+|.|++||
T Consensus 35 ~~~~c~d~d~C~~-~pC~n~g~C~~-~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy 110 (134)
T 2vh0_B 35 FWNKYKDGDQCET-SPCQNQGKCKD-GLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGY 110 (134)
T ss_dssp ------------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTE
T ss_pred ccccCCCcCcCCC-CCCCCcCCccc-CCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCc
Confidence 5667889999997 99999999998 5688999999999999999766 889764 4654 99999999999999999
Q ss_pred C----CCccC
Q psy17084 80 T----GPTCK 85 (721)
Q Consensus 80 ~----G~~C~ 85 (721)
+ |..|+
T Consensus 111 ~l~~~g~~C~ 120 (134)
T 2vh0_B 111 TLADNGKACI 120 (134)
T ss_dssp EECTTSSCEE
T ss_pred EECCCCCccC
Confidence 9 66664
No 44
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.16 E-value=2.4e-11 Score=111.14 Aligned_cols=79 Identities=33% Similarity=0.810 Sum_probs=61.9
Q ss_pred cCCCCCCCCCCCCCCEEeecCCCeEEeccCCCccCcccccCCCCCCCCCCCCc---EEeeCCC-CeEEecCCCCc----c
Q psy17084 564 ENINDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANNKNECEPNPCKNNG---TCIDGHA-DFTCLCKNGWK----G 635 (721)
Q Consensus 564 ~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g---~C~~~~~-~~~C~C~~G~~----G 635 (721)
.++++|..+||.++|+|++..++|+|.|++||+|..|+..+++|...++.+++ +|++..+ +|+|.|++||+ |
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG 124 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG 124 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTS
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCC
Confidence 36788888889888899888888999999999998887666666555565555 8888887 88888888888 7
Q ss_pred ccccCCC
Q psy17084 636 KTCTSKN 642 (721)
Q Consensus 636 ~~C~~~~ 642 (721)
..|+..+
T Consensus 125 ~~C~~~~ 131 (142)
T 2c4f_L 125 VSCTPTV 131 (142)
T ss_dssp SCEEESS
T ss_pred CCCCCCC
Confidence 7776543
No 45
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.16 E-value=2.3e-11 Score=111.34 Aligned_cols=88 Identities=25% Similarity=0.685 Sum_probs=72.9
Q ss_pred ccCCCCCCCCCCCCcEEeeCCCCeEEecCCCCccccccCCCCCCCCCCCCCCC---eeeecCC-CceeeCCCCCC----C
Q psy17084 602 NNKNECEPNPCKNNGTCIDGHADFTCLCKNGWKGKTCTSKNGHCDRGTCKHGG---TCADLGS-SFFCHCPPDWE----G 673 (721)
Q Consensus 602 ~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~---~C~~~~~-~~~C~C~~G~~----G 673 (721)
.++++|.++||.++|+|++..++|+|.|++||+|..|+..++.+...++.+++ +|+++.+ +|+|+|++||+ |
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG 124 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG 124 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTS
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCC
Confidence 46889999999999999999999999999999999998755666545555555 9999999 99999999999 8
Q ss_pred CccccCccCCCCCCCC
Q psy17084 674 TSCHIGKLNACKSNPC 689 (721)
Q Consensus 674 ~~C~~~~~~~C~~~~C 689 (721)
..|+..+..+|...|.
T Consensus 125 ~~C~~~~e~pCg~~p~ 140 (142)
T 2c4f_L 125 VSCTPTVEYPCGKIPI 140 (142)
T ss_dssp SCEEESSSSCTTCCTT
T ss_pred CCCCCCCccCCCCCCC
Confidence 8898554445665553
No 46
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.14 E-value=3.5e-11 Score=105.66 Aligned_cols=88 Identities=30% Similarity=0.727 Sum_probs=54.8
Q ss_pred CCCCCCCCC--------CCCCCEEeecCCCeEEeccCCCccCcccccC--CCCCCC--CCCCCcEEeeCCCCeEEecCCC
Q psy17084 565 NINDCKHNP--------CQNGGTCVDKVNSFQCICRDGWEGEICANNK--NECEPN--PCKNNGTCIDGHADFTCLCKNG 632 (721)
Q Consensus 565 ~~~~C~~~~--------C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~--~~C~~~--~C~~~g~C~~~~~~~~C~C~~G 632 (721)
++++|..+| |.++|+|++..++|+|.|++||+|..|+..+ ++|..+ .|.+ +|+++.++|+|+|++|
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G 82 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPG 82 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTT
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCC
Confidence 566777777 7788888888888888888888888887543 356542 2332 7887777888888888
Q ss_pred Ccc----ccccCCCCCCCCCCCCCCCeeee
Q psy17084 633 WKG----KTCTSKNGHCDRGTCKHGGTCAD 658 (721)
Q Consensus 633 ~~G----~~C~~~~~~C~~~~C~~~~~C~~ 658 (721)
|+| ..|+.. ...+|..+++|+.
T Consensus 83 ~~~~~~g~~C~~~----~~~pC~~~~~~i~ 108 (114)
T 1aut_L 83 YKLGDDLLQCHPA----VKFPCGRPWKRME 108 (114)
T ss_dssp EEECTTSSCEEEC----SSSCTTCCC----
T ss_pred eeECCCCCccCcC----cccCCCCCCccCC
Confidence 873 445432 2346666665554
No 47
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.12 E-value=2.7e-11 Score=100.57 Aligned_cols=70 Identities=30% Similarity=0.833 Sum_probs=51.6
Q ss_pred CCCCCCCCC--CCCCCeeeecCCCceeeCCCCCC-----CCccccCccCCCCCCC--CCCCCeEeeCCCceeeecCCCCc
Q psy17084 641 KNGHCDRGT--CKHGGTCADLGSSFFCHCPPDWE-----GTSCHIGKLNACKSNP--CKNGGTCVNTGDLYSCICKEGFV 711 (721)
Q Consensus 641 ~~~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~~-----G~~C~~~~~~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~~ 711 (721)
++++|...+ |.+ ++|+++.++|+|+|++||+ |..|+ +++||..+| |. +++|+++.++|+|+|++||+
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~--dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~ 77 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM--DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQ 77 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEE--ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSC
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccC--CcccccCCCCcCC-CCEeEcCCCCEEEECcCCcc
Confidence 456666554 754 4777777777788888776 56675 788887666 54 47899888889999999988
Q ss_pred cCC
Q psy17084 712 HAL 714 (721)
Q Consensus 712 g~~ 714 (721)
+..
T Consensus 78 ~~~ 80 (86)
T 1lmj_A 78 LSP 80 (86)
T ss_dssp CCS
T ss_pred cCC
Confidence 753
No 48
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.07 E-value=1.3e-10 Score=106.64 Aligned_cols=72 Identities=35% Similarity=0.965 Sum_probs=40.8
Q ss_pred cCCCCCCCCCCCCcEEeeCCCCeEEecCCCCccccccCCCCCCCCC--CCCCCCee-eecCCCceeeCCCCCC----CCc
Q psy17084 603 NKNECEPNPCKNNGTCIDGHADFTCLCKNGWKGKTCTSKNGHCDRG--TCKHGGTC-ADLGSSFFCHCPPDWE----GTS 675 (721)
Q Consensus 603 ~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~--~C~~~~~C-~~~~~~~~C~C~~G~~----G~~ 675 (721)
++++|.++||.++|+|++..++|+|.|++||+|..|+.+ ++|... +|.+ +| +++.++|+|+|++||+ |..
T Consensus 47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~-deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~ 123 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD-ATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKS 123 (146)
T ss_dssp ---CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEE-CCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSS
T ss_pred CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCC-ccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCc
Confidence 455566666666666666666666666666666666443 555543 3433 66 6666666666666666 555
Q ss_pred cc
Q psy17084 676 CH 677 (721)
Q Consensus 676 C~ 677 (721)
|+
T Consensus 124 C~ 125 (146)
T 1x7a_L 124 CK 125 (146)
T ss_dssp EE
T ss_pred CC
Confidence 55
No 49
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.04 E-value=4.7e-11 Score=107.99 Aligned_cols=68 Identities=29% Similarity=0.868 Sum_probs=13.6
Q ss_pred CCCCCCCCCCCCCCEEeecCCCeEEeccCCCccCcccccC-CCCCCC--CCCCCcEEeeCCCCeEEecCCCCc
Q psy17084 565 NINDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANNK-NECEPN--PCKNNGTCIDGHADFTCLCKNGWK 634 (721)
Q Consensus 565 ~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~-~~C~~~--~C~~~g~C~~~~~~~~C~C~~G~~ 634 (721)
++++|..+||.++|+|++..++|+|.|++||+|..|+..+ ++|..+ +|.+ +|++..++|+|.|++||+
T Consensus 41 d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT 111 (134)
T ss_dssp ----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred CcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcE
Confidence 4555555555555555555555555555555555555434 445432 2333 555555555555555555
No 50
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.01 E-value=6.9e-11 Score=112.91 Aligned_cols=84 Identities=29% Similarity=0.816 Sum_probs=28.3
Q ss_pred cCCCCCCCCCCCCCCEEeecCCCeEEeccCCCccCcccccC-CCCCCC--CCCCCcEEeeCCCCeEEecCCCCc----cc
Q psy17084 564 ENINDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANNK-NECEPN--PCKNNGTCIDGHADFTCLCKNGWK----GK 636 (721)
Q Consensus 564 ~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~-~~C~~~--~C~~~g~C~~~~~~~~C~C~~G~~----G~ 636 (721)
.++++|..+||.++|+|++..++|+|.|++||+|..|+..+ ++|..+ +|.+ +|++..++|+|.|++||+ |.
T Consensus 40 ~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~ 117 (195)
T 1nfu_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGK 117 (195)
T ss_dssp -----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSS
T ss_pred CCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCCCCC
Confidence 36777877788877888877777888888888888887656 677653 4654 777777777788888877 77
Q ss_pred cccCCCCCCCCCCCCCC
Q psy17084 637 TCTSKNGHCDRGTCKHG 653 (721)
Q Consensus 637 ~C~~~~~~C~~~~C~~~ 653 (721)
.|+..+ ..||.+.
T Consensus 118 ~C~~~~----~~PC~~~ 130 (195)
T 1nfu_B 118 ACIPTG----PYPCGKQ 130 (195)
T ss_dssp CEEESS----SSCTTCC
T ss_pred ccccCC----CCCCCCC
Confidence 776542 3456544
No 51
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.96 E-value=1.6e-10 Score=99.82 Aligned_cols=77 Identities=27% Similarity=0.679 Sum_probs=30.2
Q ss_pred CCCCccccccCCCCCCCCC--CCCCCCeeeecCCCceeeCCCCCCC---CccccCccCCCCC-CCCCCCCeEeeCCCcee
Q psy17084 630 KNGWKGKTCTSKNGHCDRG--TCKHGGTCADLGSSFFCHCPPDWEG---TSCHIGKLNACKS-NPCKNGGTCVNTGDLYS 703 (721)
Q Consensus 630 ~~G~~G~~C~~~~~~C~~~--~C~~~~~C~~~~~~~~C~C~~G~~G---~~C~~~~~~~C~~-~~C~~~~~C~~~~~~~~ 703 (721)
..||+|+.| ++++|..+ .|. ++|+++.++|+|+|++||+| ..|+ +|+||.. ++|. ++|+++.++|+
T Consensus 19 ~~~~~~~~C--d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~--dideC~~~~~C~--~~C~n~~gsy~ 90 (107)
T 2w2n_E 19 ENLYFQGAM--GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE--DIDECQDPDTCS--QLCVNLEGGYK 90 (107)
T ss_dssp -CCCCSCCB--SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE--C------------------------
T ss_pred CCCcCCCCC--cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc--cccccCCCCCcC--CeeecCCCCEE
Confidence 456777777 34566543 343 57888778888888888876 6676 7788863 6775 68888888888
Q ss_pred eecCCCCccCC
Q psy17084 704 CICKEGFVHAL 714 (721)
Q Consensus 704 C~C~~G~~g~~ 714 (721)
|+|++||+++.
T Consensus 91 C~C~~Gy~~~~ 101 (107)
T 2w2n_E 91 CQCEEGFQLDP 101 (107)
T ss_dssp -----------
T ss_pred EECCCCceECC
Confidence 88888888753
No 52
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.89 E-value=1.1e-09 Score=114.80 Aligned_cols=71 Identities=31% Similarity=0.789 Sum_probs=63.2
Q ss_pred cCCCCCCCCCCCCCCCEeccCCCCceeEeCCCCCccCccCCCCCCCCC---CCCCCCCeeeecCCceEEecCCCCCCC
Q psy17084 8 SDLNYCGTHEPCQNGGTCENTAPDQYLCTCPEGFSGINCEVVDNPCMM---GPCGNGGQCKETAGQFQCVCAPGWTGP 82 (721)
Q Consensus 8 ~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~---~~C~~~g~C~~~~g~~~C~C~~Gy~G~ 82 (721)
+|+|+|.+ +||.++|+|++ ..++|+|.|++||+|..|+.++++|.. .+|.+ .|+++.++|+|.|++||+|.
T Consensus 3 ~d~~~C~~-~pC~~~g~C~~-~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 3 KGGSPCIS-QPCLHNGSCQD-SIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp ---CCTTS-CCCTTTCCCCC-CSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred ccCCcCCC-CCCCCCCEeEC-CCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 57899998 99999999998 568899999999999999988999986 78986 99999999999999999874
No 53
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.88 E-value=7.4e-10 Score=107.85 Aligned_cols=95 Identities=29% Similarity=0.742 Sum_probs=59.0
Q ss_pred CCCCCCCCEEeecCCCeEEeccCCCccCcccccCC---------CCC----CCCCCCCcEEeeCCCCeEEecCCC-----
Q psy17084 571 HNPCQNGGTCVDKVNSFQCICRDGWEGEICANNKN---------ECE----PNPCKNNGTCIDGHADFTCLCKNG----- 632 (721)
Q Consensus 571 ~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~---------~C~----~~~C~~~g~C~~~~~~~~C~C~~G----- 632 (721)
...|.++|+|+. .+|+|.+||+|..|+.... .|. ..+|+++|+|+.. +|+|.+|
T Consensus 95 ~~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g----~C~C~~gw~~~~ 166 (217)
T 2p28_B 95 RSLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGK 166 (217)
T ss_dssp -CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEETT----EEEECCCCSTTC
T ss_pred CCccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeCC----ceECCCCCCCcc
Confidence 346889999985 3899999999999974432 243 2456666666632 5666666
Q ss_pred -CccccccCCCCCCCCC---CCCCC--CeeeecCCCceeeCCCCCCCCccc
Q psy17084 633 -WKGKTCTSKNGHCDRG---TCKHG--GTCADLGSSFFCHCPPDWEGTSCH 677 (721)
Q Consensus 633 -~~G~~C~~~~~~C~~~---~C~~~--~~C~~~~~~~~C~C~~G~~G~~C~ 677 (721)
|+|..|+.++..|... +|.++ |+|.. .+|.|.+||+|..|+
T Consensus 167 ~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~C~ 213 (217)
T 2p28_B 167 LIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQ 213 (217)
T ss_dssp CEESTTSCEESSCSCEETTEETTCTTTEEEET----TEEEECTTEESTTSC
T ss_pred cEECCCcccCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCCcC
Confidence 4666665444445433 45555 56652 256666666666555
No 54
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.83 E-value=1.2e-09 Score=94.35 Aligned_cols=75 Identities=25% Similarity=0.666 Sum_probs=21.9
Q ss_pred CCCccCcccccCCCCCCC--CCCCCcEEeeCCCCeEEecCCCCcc---ccccCCCCCCCC-CCCCCCCeeeecCCCceee
Q psy17084 593 DGWEGEICANNKNECEPN--PCKNNGTCIDGHADFTCLCKNGWKG---KTCTSKNGHCDR-GTCKHGGTCADLGSSFFCH 666 (721)
Q Consensus 593 ~G~~G~~C~~~~~~C~~~--~C~~~g~C~~~~~~~~C~C~~G~~G---~~C~~~~~~C~~-~~C~~~~~C~~~~~~~~C~ 666 (721)
.+|+|+.| ++++|..+ +|. ++|++..++|+|.|++||+| ..|+ ++++|.. .+|. ++|+++.++|+|.
T Consensus 20 ~~~~~~~C--d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C~ 92 (107)
T 2w2n_E 20 NLYFQGAM--GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQ 92 (107)
T ss_dssp CCCCSCCB--SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE-C--------------------------
T ss_pred CCcCCCCC--cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--CeeecCCCCEEEE
Confidence 34555555 24445432 232 35555555555555555555 4554 4555542 4553 4566666666666
Q ss_pred CCCCCCCC
Q psy17084 667 CPPDWEGT 674 (721)
Q Consensus 667 C~~G~~G~ 674 (721)
|++||+++
T Consensus 93 C~~Gy~~~ 100 (107)
T 2w2n_E 93 CEEGFQLD 100 (107)
T ss_dssp --------
T ss_pred CCCCceEC
Confidence 66666543
No 55
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.81 E-value=1.6e-09 Score=105.48 Aligned_cols=97 Identities=25% Similarity=0.551 Sum_probs=78.6
Q ss_pred CCCCCCcEEeeCCCCeEEecCCCCccccccCCCC---------CCC----CCCCCCCCeeeecCCCceeeCCCC------
Q psy17084 610 NPCKNNGTCIDGHADFTCLCKNGWKGKTCTSKNG---------HCD----RGTCKHGGTCADLGSSFFCHCPPD------ 670 (721)
Q Consensus 610 ~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~---------~C~----~~~C~~~~~C~~~~~~~~C~C~~G------ 670 (721)
..|+++|+|+. .+|+|.+||+|.+|+...+ .|. ..+|.++|+|+. .+|+|++|
T Consensus 96 ~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~ 167 (217)
T 2p28_B 96 SLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKL 167 (217)
T ss_dssp CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCC
T ss_pred CccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCccc
Confidence 45899999985 4899999999999985432 354 357999999984 47999999
Q ss_pred CCCCccccCccCCCCCC---CCCCC--CeEeeCCCceeeecCCCCccCCcccCC
Q psy17084 671 WEGTSCHIGKLNACKSN---PCKNG--GTCVNTGDLYSCICKEGFVHALLFTRR 719 (721)
Q Consensus 671 ~~G~~C~~~~~~~C~~~---~C~~~--~~C~~~~~~~~C~C~~G~~g~~c~~~~ 719 (721)
|+|..|++ +++.|..+ +|..+ |+|+. .+|+|++||+|..|+...
T Consensus 168 ~~G~~Ce~-~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~C~~~~ 216 (217)
T 2p28_B 168 IYGQYCEC-DTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQHHH 216 (217)
T ss_dssp EESTTSCE-ESSCSCEETTEETTCTTTEEEET----TEEEECTTEESTTSCEEC
T ss_pred EECCCccc-CCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCCcCCCC
Confidence 69999984 56788765 69988 99995 289999999999998643
No 56
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.79 E-value=1.7e-08 Score=117.30 Aligned_cols=170 Identities=26% Similarity=0.630 Sum_probs=108.8
Q ss_pred CCCCCCEeccCCCCceeE----eCCCCCccCccCCCCCCCCCC--CCCCCCeeeecCCceEEe----cCCCCCCCccCcc
Q psy17084 18 PCQNGGTCENTAPDQYLC----TCPEGFSGINCEVVDNPCMMG--PCGNGGQCKETAGQFQCV----CAPGWTGPTCKIK 87 (721)
Q Consensus 18 ~C~~~g~C~~~~~~~~~C----~C~~G~~G~~C~~~~~~C~~~--~C~~~g~C~~~~g~~~C~----C~~Gy~G~~C~~~ 87 (721)
+|.+ |.|+. ..++| .|..|.-..+|.. .+|... .|. ++.|++. ++.|. |..|..+..|.
T Consensus 182 ~C~~-g~Ci~---~~~~CDg~~dC~dgsDE~~C~~--~~C~~~~f~C~-~g~Ci~~--~~~Cdg~~dC~dgsde~~C~-- 250 (699)
T 1n7d_A 182 HCLS-GECIH---SSWRCDGGPDCKDKSDEENCAV--ATCRPDEFQCS-DGNCIHG--SRQCDREYDCKDMSDEVGCV-- 250 (699)
T ss_dssp CCSS-SCCCS---TTCTTSSSCCSTTSCSSCSCCC--CCCCSSEEESS-SSCEEET--TCCSSSCCCSSSSCSSSSTT--
T ss_pred ecCC-CceEe---chhccCCCCCCCCCcccccCCC--cccCCCcEecC-CCceeee--ecccCCCCCCCCCCccCCCC--
Confidence 4654 47875 46778 7888877777752 456543 576 4788873 56675 77777655553
Q ss_pred CCCCCcccccccccCccccccCCCCCCC--CCCCCCCCeeccCCC-CceeeeCCCCCcCCcccccCCCCCCCCCCCCCee
Q psy17084 88 HNFFPYLQFIPLTTSLFRLLSDLNYCGT--HEPCQNGGTCENTAP-DQYLCTCPEGFSGINCEVVDNPCMMGPCGNGGQC 164 (721)
Q Consensus 88 ~~~~~~~~c~c~~~~~~~~~~~~~~C~~--~~~C~~~g~C~~~~~-~~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C 164 (721)
.+..|.. ...|.+ ++|+.... -.+.+.|+.|+.+...+
T Consensus 251 ---------------------~~~~C~~~~~~~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~----------------- 291 (699)
T 1n7d_A 251 ---------------------NVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKE----------------- 291 (699)
T ss_dssp ---------------------CCCCCCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCSS-----------------
T ss_pred ---------------------CCCcccCCCceecCC-CcEeCCcccccccceecCcccccccc-----------------
Confidence 1123311 134544 55654211 12455666665442211
Q ss_pred eecCCceeeccCCCCCCCCCCCCCceeeCCCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCC-CCCCCCCCEEeeCC
Q psy17084 165 KETAGQFQCVDHDHCNPNPCLNGAPCFNTQADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECV-SNPCQNGGTCVDLV 243 (721)
Q Consensus 165 ~~~~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~-~~~C~~~~~C~~~~ 243 (721)
| +++||..++-...+.|+++.++|+|.|++||++. ++..|++|+||. ..+|. ++|+++.
T Consensus 292 --------C-~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~---------~~~~C~dideC~~~~~C~--~~C~n~~ 351 (699)
T 1n7d_A 292 --------C-GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV---------AQRRCEDIDECQDPDTCS--QLCVNLE 351 (699)
T ss_dssp --------C-CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCC---------SSSCCCCCCCCSSSSSCT--TTCCBCS
T ss_pred --------c-ccccccccccCcCCCcccCCCCcEEeCCCCeEcC---------CCCcccCccccCCCCccc--cccccCC
Confidence 2 3455544332224689999999999999999962 456788999998 57786 4899999
Q ss_pred CCeEeecCCCCccC
Q psy17084 244 DGYKCECTQAWEGS 257 (721)
Q Consensus 244 g~~~C~C~~G~~G~ 257 (721)
++|+|.|++||++.
T Consensus 352 g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 352 GGYKCQCEEGFQLD 365 (699)
T ss_dssp SCBCCCCCSSCBCC
T ss_pred CCeeeeeecccccC
Confidence 99999999999864
No 57
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.75 E-value=4.8e-09 Score=77.64 Aligned_cols=46 Identities=24% Similarity=0.618 Sum_probs=29.6
Q ss_pred CCccccCCCCCCCCCCCCCCEE-----eecCCCeEEeccCCCccCcccccC
Q psy17084 559 GKYCHENINDCKHNPCQNGGTC-----VDKVNSFQCICRDGWEGEICANNK 604 (721)
Q Consensus 559 G~~C~~~~~~C~~~~C~~~g~C-----~~~~~~~~C~C~~G~~G~~C~~~~ 604 (721)
|..|+.++++|+++||+++|+| ++..++|+|.|++||+|++|+..+
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v 51 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYV 51 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEEC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccC
Confidence 4456667777777777777777 345566777777777777776554
No 58
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.68 E-value=8.7e-09 Score=76.24 Aligned_cols=43 Identities=28% Similarity=0.596 Sum_probs=34.4
Q ss_pred cCccCCCCCCCCCCCCCCCCee-----eecCCceEEecCCCCCCCccC
Q psy17084 43 GINCEVVDNPCMMGPCGNGGQC-----KETAGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 43 G~~C~~~~~~C~~~~C~~~g~C-----~~~~g~~~C~C~~Gy~G~~C~ 85 (721)
|++|+.+++||.++||.++|+| ++..++|+|.|++||+|..||
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE 48 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ 48 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence 5778888899999999999999 456778999999999999887
No 59
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.68 E-value=1.4e-08 Score=106.34 Aligned_cols=70 Identities=29% Similarity=0.786 Sum_probs=55.0
Q ss_pred cCCCCCCCCCCCCcEEeeCCCCeEEecCCCCccccccCCCCCCCC---CCCCCCCeeeecCCCceeeCCCCCCCC
Q psy17084 603 NKNECEPNPCKNNGTCIDGHADFTCLCKNGWKGKTCTSKNGHCDR---GTCKHGGTCADLGSSFFCHCPPDWEGT 674 (721)
Q Consensus 603 ~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~---~~C~~~~~C~~~~~~~~C~C~~G~~G~ 674 (721)
++++|..+||.++|+|++..++|+|.|++||+|..|+.++++|.. .+|.+ .|+++.++|+|.|++||.|.
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 567888888888888888778888888888888888777788876 67775 88888888888888888775
No 60
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.64 E-value=6e-08 Score=112.60 Aligned_cols=132 Identities=27% Similarity=0.655 Sum_probs=95.0
Q ss_pred CCCCCCEEeecCCCeEEe----ccCCCccCcccccCCCCC---CCCCCCCcEEeeCCC--CeEEecCCCCccccccCCCC
Q psy17084 573 PCQNGGTCVDKVNSFQCI----CRDGWEGEICANNKNECE---PNPCKNNGTCIDGHA--DFTCLCKNGWKGKTCTSKNG 643 (721)
Q Consensus 573 ~C~~~g~C~~~~~~~~C~----C~~G~~G~~C~~~~~~C~---~~~C~~~g~C~~~~~--~~~C~C~~G~~G~~C~~~~~ 643 (721)
.|.+ +.|++. +++|. |.+|.....|.. +..|. ..+|.+ |+|++... .+.+.|+.|+.+...+-.++
T Consensus 221 ~C~~-g~Ci~~--~~~Cdg~~dC~dgsde~~C~~-~~~C~~~~~~~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~ 295 (699)
T 1n7d_A 221 QCSD-GNCIHG--SRQCDREYDCKDMSDEVGCVN-VTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKECGTN 295 (699)
T ss_dssp ESSS-SCEEET--TCCSSSCCCSSSSCSSSSTTC-CCCCCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCSSCCCC
T ss_pred ecCC-Cceeee--ecccCCCCCCCCCCccCCCCC-CCcccCCCceecCC-CcEeCCcccccccceecCcccccccccccc
Confidence 3553 678774 56776 888888777853 45563 245765 78876432 35678888876654333456
Q ss_pred CCCCCCCCCCCeeeecCCCceeeCCCCCC---CCccccCccCCCC-CCCCCCCCeEeeCCCceeeecCCCCccC
Q psy17084 644 HCDRGTCKHGGTCADLGSSFFCHCPPDWE---GTSCHIGKLNACK-SNPCKNGGTCVNTGDLYSCICKEGFVHA 713 (721)
Q Consensus 644 ~C~~~~C~~~~~C~~~~~~~~C~C~~G~~---G~~C~~~~~~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~~g~ 713 (721)
+|..++-.-.++|+++.++|+|.|++||+ |..|+ +++||. +.+|. ++|+|+.++|+|.|++||++.
T Consensus 296 eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~--dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 296 ECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE--DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp CTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCC--CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred cccccccCcCCCcccCCCCcEEeCCCCeEcCCCCccc--CccccCCCCccc--cccccCCCCeeeeeecccccC
Confidence 67654311236899999999999999998 67787 899997 56785 489999999999999999974
No 61
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.56 E-value=5.3e-08 Score=113.83 Aligned_cols=119 Identities=29% Similarity=0.699 Sum_probs=67.8
Q ss_pred CCeeeecCCceeeccCCCCC---CCCCCCCCceeeCCC--CeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCCCCCCCC
Q psy17084 161 GGQCKETAGQFQCVDHDHCN---PNPCLNGAPCFNTQA--DYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECVSNPCQN 235 (721)
Q Consensus 161 ~~~C~~~~~~~~C~~~~~C~---~~~C~~~~~C~~~~g--~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~~~~C~~ 235 (721)
...|.+..+...|..+.+|. ..+|.+ +.|++... .+.+.|..|+.... ..| ++++|..++...
T Consensus 255 ~~dC~dgsDE~~C~~~~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~----------~~C-~~~~C~~~~~~C 322 (791)
T 3m0c_C 255 EYDCKDMSDEVGCVNVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPI----------KEC-GTNECLDNNGGC 322 (791)
T ss_dssp ------------------CCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCC----------TTB-SCCSTTTGGGGC
T ss_pred hhccccccccCcccccccccCCCccccCC-CcccccccccCCccccccccCccc----------ccc-ccccccccccCc
Confidence 33566666667777666674 235664 57776543 34566777764422 112 235555332222
Q ss_pred CCEEeeCCCCeEeecCCCCc---cCCCccCCCCCC-CCCCCCCCcceEecCCCcEEeCCCCCcc
Q psy17084 236 GGTCVDLVDGYKCECTQAWE---GSNCQYDADECQ-KSPCVNAALGCTNLVGDYRCNCSPGWTG 295 (721)
Q Consensus 236 ~~~C~~~~g~~~C~C~~G~~---G~~C~~~~~~C~-~~~C~~~~~~C~~~~g~~~C~C~~G~~G 295 (721)
.++|+++.++|+|.|++||. |..|+ +++||. ..+|. +.|+|+.|+|+|.|.+||++
T Consensus 323 ~~~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC~~~~~C~---~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 323 SHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS---QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp SSEEEECSBSEEEECCTTCEEETTTEEE-CCCCCSSSSSCT---TTCCBCSSCBCCCCCSSEEC
T ss_pred cccccCCCCCcccCCCCCCccCCCCccc-cCcccCCCCCCC---CeeecCCCCceeecCCCCEe
Confidence 34899999999999999995 78887 899997 33453 46999999999999999975
No 62
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.51 E-value=8.3e-08 Score=66.19 Aligned_cols=38 Identities=47% Similarity=1.128 Sum_probs=26.0
Q ss_pred cCCCCCCCCCCCCCCCEeccCCCCceeEeCCCCCccCccC
Q psy17084 8 SDLNYCGTHEPCQNGGTCENTAPDQYLCTCPEGFSGINCE 47 (721)
Q Consensus 8 ~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~C~ 47 (721)
+|+|+|.+ +||+++|+|++ ..++|+|.|++||+|..|+
T Consensus 1 ~d~d~C~~-~pC~ngg~C~~-~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 1 VDGDQCES-NPCLNGGSCKD-DINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCCTTTT-CCCCTTCEEEE-ETTEEEEECCTTCCSTTSC
T ss_pred CccccCCC-CCCCCCCEeEc-CCCceEeECCCCCcCCccC
Confidence 35677765 67777777776 3566777777777777665
No 63
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.49 E-value=8.5e-08 Score=112.09 Aligned_cols=132 Identities=27% Similarity=0.656 Sum_probs=72.4
Q ss_pred CCCCCCEEeecCCCeEE----eccCCCccCcccccCCCCC---CCCCCCCcEEeeCCC--CeEEecCCCCccccccCCCC
Q psy17084 573 PCQNGGTCVDKVNSFQC----ICRDGWEGEICANNKNECE---PNPCKNNGTCIDGHA--DFTCLCKNGWKGKTCTSKNG 643 (721)
Q Consensus 573 ~C~~~g~C~~~~~~~~C----~C~~G~~G~~C~~~~~~C~---~~~C~~~g~C~~~~~--~~~C~C~~G~~G~~C~~~~~ 643 (721)
.|.+ +.|++. ++.| .|.+|+.+..|.. +++|. ..+|.+ |.|++... .+.+.|+.|+.+...+-.++
T Consensus 239 ~C~~-g~Ci~~--~~~Cdg~~dC~dgsDE~~C~~-~~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~ 313 (791)
T 3m0c_C 239 QCSD-GNCIHG--SRQCDREYDCKDMSDEVGCVN-VTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKECGTN 313 (791)
T ss_dssp --------------------------------------CCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCTTBSCC
T ss_pred eecC-CceEec--ceecCChhccccccccCcccc-cccccCCCccccCC-CcccccccccCCccccccccCccccccccc
Confidence 3543 456543 3455 5788887777753 44553 246775 78886533 34568888876543222334
Q ss_pred CCCCCCCCCCCeeeecCCCceeeCCCCCC---CCccccCccCCCC-CCCCCCCCeEeeCCCceeeecCCCCccC
Q psy17084 644 HCDRGTCKHGGTCADLGSSFFCHCPPDWE---GTSCHIGKLNACK-SNPCKNGGTCVNTGDLYSCICKEGFVHA 713 (721)
Q Consensus 644 ~C~~~~C~~~~~C~~~~~~~~C~C~~G~~---G~~C~~~~~~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~~g~ 713 (721)
+|..++....++|+++.++|+|.|++||. |..|+ +++||. +.+| .++|+|+.++|+|.|++||.+.
T Consensus 314 ~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~--dideC~~~~~C--~~~C~n~~gsy~C~C~~Gy~l~ 383 (791)
T 3m0c_C 314 ECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE--DIDECQDPDTC--SQLCVNLEGGYKCQCEEGFQLD 383 (791)
T ss_dssp STTTGGGGCSSEEEECSBSEEEECCTTCEEETTTEEE--CCCCCSSSSSC--TTTCCBCSSCBCCCCCSSEECC
T ss_pred cccccccCccccccCCCCCcccCCCCCCccCCCCccc--cCcccCCCCCC--CCeeecCCCCceeecCCCCEeC
Confidence 55433222234899999999999999995 78887 899997 3345 4589999999999999999863
No 64
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.43 E-value=1.9e-07 Score=64.31 Aligned_cols=37 Identities=38% Similarity=0.775 Sum_probs=30.2
Q ss_pred ccCCCCCCCCCCCCeEeeCCCceeeecCCCCccCCcc
Q psy17084 680 KLNACKSNPCKNGGTCVNTGDLYSCICKEGFVHALLF 716 (721)
Q Consensus 680 ~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~c~ 716 (721)
++++|.++||.++++|++..++|+|.|++||+|..|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 5678888888888888888888888888888888775
No 65
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.33 E-value=7.3e-08 Score=72.93 Aligned_cols=43 Identities=26% Similarity=0.753 Sum_probs=37.4
Q ss_pred eeeccCCCCCCCCCCCCCC--CEeccCCCCceeEeCCCCCc-cCccCC
Q psy17084 4 FRLLSDLNYCGTHEPCQNG--GTCENTAPDQYLCTCPEGFS-GINCEV 48 (721)
Q Consensus 4 ~~~~~~~~~C~~~~~C~~~--g~C~~~~~~~~~C~C~~G~~-G~~C~~ 48 (721)
-.|..++|+|.+ +||+++ |+|++ .+++|+|.|++||+ |.+|+.
T Consensus 5 ~~~~~~~d~C~s-nPC~nga~gtC~~-~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 5 VQLSETPAACSS-NPCGPEAAGTCKE-TNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp --CTTSCCHHHH-CSSCSSSCCEEEE-CSSEEEEECCTTEEEEECSSS
T ss_pred hhhcCCCCcCcC-CCCcCCCcccccc-CCCceEeECCCCCccCCCCCC
Confidence 456899999998 999999 89999 57899999999999 999974
No 66
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.29 E-value=6.1e-07 Score=66.32 Aligned_cols=42 Identities=36% Similarity=0.790 Sum_probs=35.4
Q ss_pred CCCCCCCCC---CCCCCCEec--cCCCCceeEeCCCCCccCccCCCCCC
Q psy17084 9 DLNYCGTHE---PCQNGGTCE--NTAPDQYLCTCPEGFSGINCEVVDNP 52 (721)
Q Consensus 9 ~~~~C~~~~---~C~~~g~C~--~~~~~~~~C~C~~G~~G~~C~~~~~~ 52 (721)
|||+|.+ + ||+++|+|+ + ..++|+|.|++||+|.+|+..+.+
T Consensus 2 ~i~~C~~-~~~~pC~ngg~C~~~~-~~~~~~C~C~~G~~G~~Ce~~~~~ 48 (53)
T 1egf_A 2 SYPGCPS-SYDGYCLNGGVCMHIE-SLDSYTCNCVIGYSGDRCQTRDLR 48 (53)
T ss_dssp EECCCCT-TSSCSSCSSCEEEEES-SSSCEEEECCTTCCSSSSCCCSCC
T ss_pred CcccCCC-CCCCcCCCCcEEEeeC-CCCCEEEECCCCCcCCcCCccCcc
Confidence 6889987 5 999999998 5 568899999999999999876543
No 67
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.27 E-value=1.4e-07 Score=101.63 Aligned_cols=76 Identities=22% Similarity=0.648 Sum_probs=18.1
Q ss_pred cCCCCCCCCCCCCCceeeCCCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCC-CCCCCCCCEEeeCCCCeEeecCCC
Q psy17084 175 DHDHCNPNPCLNGAPCFNTQADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECV-SNPCQNGGTCVDLVDGYKCECTQA 253 (721)
Q Consensus 175 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~G 253 (721)
++|||..+++...+.|.+..++|+|.|++||++.. ++..|.+++||. ..+|.+ .|+++.++|+|.|++|
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~--------~~~~C~d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g 71 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTE--------DGRTCQDVNECAEEGYCSQ--GCTNSEGAFQCWCEAG 71 (386)
T ss_dssp ----------------------------------------------------------CCTT--EEC-----CCEECCTT
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECC--------CCCccCccceeCCcCcccC--cCCCCCCCCeEEECCC
Confidence 57888888776677999999999999999998432 445677999997 578985 4999999999999999
Q ss_pred Cc----cCCCc
Q psy17084 254 WE----GSNCQ 260 (721)
Q Consensus 254 ~~----G~~C~ 260 (721)
|+ |..|.
T Consensus 72 ~~l~~d~~~C~ 82 (386)
T 3v65_B 72 YELRPDRRSCK 82 (386)
T ss_dssp EEECTTSSCEE
T ss_pred ceEcCCCCeEC
Confidence 98 55554
No 68
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.25 E-value=1.6e-07 Score=101.23 Aligned_cols=73 Identities=29% Similarity=0.741 Sum_probs=18.0
Q ss_pred cCCCCCCCCCCCCCCCEeccCCCCceeEeCCCCCc----cCccCCCCCCCC-CCCCCCCCeeeecCCceEEecCCCCC--
Q psy17084 8 SDLNYCGTHEPCQNGGTCENTAPDQYLCTCPEGFS----GINCEVVDNPCM-MGPCGNGGQCKETAGQFQCVCAPGWT-- 80 (721)
Q Consensus 8 ~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~----G~~C~~~~~~C~-~~~C~~~g~C~~~~g~~~C~C~~Gy~-- 80 (721)
+|+|||.. +++...++|++ ..++|+|.|++||+ |..|+ +++||. ..+|.+ .|+++.|+|+|.|++||+
T Consensus 1 ~~~~~C~~-~~~~c~~~C~~-~~g~~~C~C~~G~~l~~~~~~C~-d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~l~ 75 (386)
T 3v65_B 1 TGEENCNV-NNGGCAQKCQM-IRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYELR 75 (386)
T ss_dssp ------------------------------------------------------CCTT--EEC-----CCEECCTTEEEC
T ss_pred CCcCcccC-CCCCCCCCCcC-CCCCcEeECCCCceECCCCCccC-ccceeCCcCcccC--cCCCCCCCCeEEECCCceEc
Confidence 47899987 66555569987 57889999999998 89995 789996 578985 499999999999999998
Q ss_pred --CCccC
Q psy17084 81 --GPTCK 85 (721)
Q Consensus 81 --G~~C~ 85 (721)
|..|+
T Consensus 76 ~d~~~C~ 82 (386)
T 3v65_B 76 PDRRSCK 82 (386)
T ss_dssp TTSSCEE
T ss_pred CCCCeEC
Confidence 55554
No 69
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.25 E-value=4.9e-07 Score=97.80 Aligned_cols=67 Identities=27% Similarity=0.673 Sum_probs=58.9
Q ss_pred CCCCCCCCCCCCCEeccCCCCceeEeCCCCCc---cCccCCCCCCCC-CCCCCCCCeeeecCCceEEecCCCCCCC
Q psy17084 11 NYCGTHEPCQNGGTCENTAPDQYLCTCPEGFS---GINCEVVDNPCM-MGPCGNGGQCKETAGQFQCVCAPGWTGP 82 (721)
Q Consensus 11 ~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~---G~~C~~~~~~C~-~~~C~~~g~C~~~~g~~~C~C~~Gy~G~ 82 (721)
|||.. +++..+++|++ .+++|.|.|++||+ |..|+ +++||. ..+|.+ .|+|+.|+|+|.|.+||++.
T Consensus 1 ~eC~~-~~~~c~~~C~~-~~~~y~C~C~~G~~~~~~~~C~-dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 1 NECLD-NNGGCSHVCND-LKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp CCTTT-TGGGCSSEEEE-CSSSEEEECCTTEEECSSSCEE-ECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred CcccC-CCCCCCCEeEC-CCCCeEEECCCCCCcCCCCccc-CchhhhccCCCCC--ccCCCccceeeecccccccc
Confidence 68987 78888899999 57899999999998 89997 789997 467865 89999999999999999864
No 70
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.23 E-value=5.8e-07 Score=97.20 Aligned_cols=67 Identities=27% Similarity=0.734 Sum_probs=41.9
Q ss_pred CCCCCCCCCCCcEEeeCCCCeEEecCCCCc---cccccCCCCCCC-CCCCCCCCeeeecCCCceeeCCCCCCCC
Q psy17084 605 NECEPNPCKNNGTCIDGHADFTCLCKNGWK---GKTCTSKNGHCD-RGTCKHGGTCADLGSSFFCHCPPDWEGT 674 (721)
Q Consensus 605 ~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~---G~~C~~~~~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~~G~ 674 (721)
+||..+++...++|+++.++|+|.|++||+ |..|+ ++++|. ..+|.+ +|+++.++|.|.|++||.+.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCccc-CchhhhccCCCCC--ccCCCccceeeecccccccc
Confidence 456666655556676666667777777766 56664 456665 245543 66666666666666666654
No 71
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.16 E-value=1.3e-06 Score=62.08 Aligned_cols=39 Identities=33% Similarity=0.664 Sum_probs=30.0
Q ss_pred CCCCCC---CCCCCCEecc-CCCCceeEeCCCCCccCccCCCCC
Q psy17084 12 YCGTHE---PCQNGGTCEN-TAPDQYLCTCPEGFSGINCEVVDN 51 (721)
Q Consensus 12 ~C~~~~---~C~~~g~C~~-~~~~~~~C~C~~G~~G~~C~~~~~ 51 (721)
+|.+ + ||+++|+|+. ...++|+|.|++||+|.+|+.+++
T Consensus 2 ~C~~-~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~ 44 (45)
T 1a3p_A 2 GXPS-SYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRDL 44 (45)
T ss_dssp CCTT-CCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCEECC
T ss_pred Cccc-CCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcccC
Confidence 5665 5 8999999972 145789999999999999986554
No 72
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.06 E-value=2.7e-06 Score=60.44 Aligned_cols=30 Identities=33% Similarity=0.925 Sum_probs=15.7
Q ss_pred CCCCCCEEe--ecCCCeEEeccCCCccCcccc
Q psy17084 573 PCQNGGTCV--DKVNSFQCICRDGWEGEICAN 602 (721)
Q Consensus 573 ~C~~~g~C~--~~~~~~~C~C~~G~~G~~C~~ 602 (721)
||.++|+|+ +..++|+|.|++||+|.+|+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 555555554 344455555555555555543
No 73
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.05 E-value=1.3e-06 Score=67.16 Aligned_cols=46 Identities=30% Similarity=0.613 Sum_probs=38.5
Q ss_pred CCCCCCCCCCCCCCCEeccC----CCCceeEeCCCCCccCccCCCCCCCCC
Q psy17084 9 DLNYCGTHEPCQNGGTCENT----APDQYLCTCPEGFSGINCEVVDNPCMM 55 (721)
Q Consensus 9 ~~~~C~~~~~C~~~g~C~~~----~~~~~~C~C~~G~~G~~C~~~~~~C~~ 55 (721)
..|+|.+ +||+|+|+|++. ..++|+|.|++||+|.+|+.+++++..
T Consensus 5 ~c~~C~~-~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 5 KCAEKEK-TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQ 54 (63)
T ss_dssp ECCHHHH-TTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCT
T ss_pred ccCCCCC-CcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccc
Confidence 4578877 999999999851 357899999999999999988887754
No 74
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.04 E-value=4.6e-06 Score=61.57 Aligned_cols=41 Identities=34% Similarity=0.856 Sum_probs=35.2
Q ss_pred CCCCCCCC---CCCCCCEEe--eCCCCeEeecCCCCccCCCccCCC
Q psy17084 224 DIDECVSN---PCQNGGTCV--DLVDGYKCECTQAWEGSNCQYDAD 264 (721)
Q Consensus 224 ~~~~C~~~---~C~~~~~C~--~~~g~~~C~C~~G~~G~~C~~~~~ 264 (721)
+|++|.++ ||.++|+|+ +..++|+|.|++||+|..|+.++.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~ 47 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDL 47 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccCc
Confidence 67888876 999999999 778899999999999999986553
No 75
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.01 E-value=1e-06 Score=66.61 Aligned_cols=39 Identities=33% Similarity=0.802 Sum_probs=36.0
Q ss_pred CCCCCCCCCCCCCCC--CEEeeCCCCeEeecCCCCc-cCCCc
Q psy17084 222 CDDIDECVSNPCQNG--GTCVDLVDGYKCECTQAWE-GSNCQ 260 (721)
Q Consensus 222 C~~~~~C~~~~C~~~--~~C~~~~g~~~C~C~~G~~-G~~C~ 260 (721)
+.++|+|.++||.++ |+|++..++|+|.|++||+ |..|+
T Consensus 8 ~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 8 SETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp TTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred cCCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 457899999999998 8999999999999999999 99987
No 76
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.99 E-value=7.9e-07 Score=97.50 Aligned_cols=77 Identities=31% Similarity=0.834 Sum_probs=26.6
Q ss_pred EeccCCCccCcccccCCCCCCCCCCCCcEEeeCCCCeEEecCCCCccccccCCCCCCCCCCCCCCCeeeecCCCceeeCC
Q psy17084 589 CICRDGWEGEICANNKNECEPNPCKNNGTCIDGHADFTCLCKNGWKGKTCTSKNGHCDRGTCKHGGTCADLGSSFFCHCP 668 (721)
Q Consensus 589 C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~ 668 (721)
..|..+|.|..|+. ++|.. +|.+ |+|++. ++|.|++||+|..|+. +.|.+ +|.++|+|++. +.|.|+
T Consensus 379 ~~C~~~~~g~~c~~--~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~~C~~--~~C~~-~C~~~g~C~~~---~~C~C~ 445 (463)
T 2wg3_C 379 EECRATVQPAQTLT--SECSR-LCRN-GYCTPT---GKCCCSPGWEGDFCRT--AKCEP-ACRHGGVCVRP---NKCLCK 445 (463)
T ss_dssp GGGCCCCCCCCCCC--CHHHH-HCCS-EEECTT---SCEEECTTEESTTSCE--ECC-----------------------
T ss_pred ccCCCCCcCCCCcc--ccccC-CCCC-CccCCC---CeECCCCCcCCCcCCc--CcCCC-CCCCCCEECCC---CEEECC
Confidence 45666666666542 34543 4654 666532 3666666666666642 34554 66666666643 456666
Q ss_pred CCCCCCcccc
Q psy17084 669 PDWEGTSCHI 678 (721)
Q Consensus 669 ~G~~G~~C~~ 678 (721)
+||+|..|+.
T Consensus 446 ~G~~G~~C~~ 455 (463)
T 2wg3_C 446 KGYLGPQCEQ 455 (463)
T ss_dssp ----------
T ss_pred CCcccCCCCC
Confidence 6666666663
No 77
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.98 E-value=7.8e-07 Score=97.54 Aligned_cols=80 Identities=29% Similarity=0.801 Sum_probs=39.3
Q ss_pred EEecCCCCccccccCCCCCCCCCCCCCCCeeeecCCCceeeCCCCCCCCccccCccCCCCCCCCCCCCeEeeCCCceeee
Q psy17084 626 TCLCKNGWKGKTCTSKNGHCDRGTCKHGGTCADLGSSFFCHCPPDWEGTSCHIGKLNACKSNPCKNGGTCVNTGDLYSCI 705 (721)
Q Consensus 626 ~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~~C~~~~C~~~~~C~~~~~~~~C~ 705 (721)
..+|..+|.|..|+. +.|.. +|.+ ++|++. ++|+|++||+|..|+ +++|.+ +|.++++|++. ++|+
T Consensus 378 p~~C~~~~~g~~c~~--~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~~C~---~~~C~~-~C~~~g~C~~~---~~C~ 443 (463)
T 2wg3_C 378 PEECRATVQPAQTLT--SECSR-LCRN-GYCTPT---GKCCCSPGWEGDFCR---TAKCEP-ACRHGGVCVRP---NKCL 443 (463)
T ss_dssp CGGGCCCCCCCCCCC--CHHHH-HCCS-EEECTT---SCEEECTTEESTTSC---EECC---------------------
T ss_pred cccCCCCCcCCCCcc--ccccC-CCCC-CccCCC---CeECCCCCcCCCcCC---cCcCCC-CCCCCCEECCC---CEEE
Confidence 358889999999864 46764 5886 899853 479999999999997 468977 99999999975 6999
Q ss_pred cCCCCccCCcccCC
Q psy17084 706 CKEGFVHALLFTRR 719 (721)
Q Consensus 706 C~~G~~g~~c~~~~ 719 (721)
|++||+|..|+...
T Consensus 444 C~~G~~G~~C~~~~ 457 (463)
T 2wg3_C 444 CKKGYLGPQCEQVD 457 (463)
T ss_dssp --------------
T ss_pred CCCCcccCCCCCCc
Confidence 99999999998754
No 78
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.93 E-value=1.1e-06 Score=64.69 Aligned_cols=41 Identities=32% Similarity=0.714 Sum_probs=34.0
Q ss_pred eeEeCCCCCccCccCCCCCCCCCCCCCCCCeeee----cCCceEEecCCCCCCCccC
Q psy17084 33 YLCTCPEGFSGINCEVVDNPCMMGPCGNGGQCKE----TAGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 33 ~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~----~~g~~~C~C~~Gy~G~~C~ 85 (721)
++|.|++||+ ++||.++|+|++ ..++|+|.|++||+|..|+
T Consensus 3 ~~C~C~~g~~------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 3 PTYKCPETFD------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (52)
T ss_dssp CCBCCCHHHH------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred eeeECCCCCc------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence 4688888887 458889999987 3567999999999999887
No 79
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.89 E-value=7.3e-06 Score=58.28 Aligned_cols=36 Identities=36% Similarity=0.726 Sum_probs=26.9
Q ss_pred CCCCCCC---CCCCCCCeeeecC--CceEEecCCCCCCCccC
Q psy17084 49 VDNPCMM---GPCGNGGQCKETA--GQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 49 ~~~~C~~---~~C~~~g~C~~~~--g~~~C~C~~Gy~G~~C~ 85 (721)
++++|.+ +||.+ |+|++.. ++|+|.|++||+|..|+
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce 42 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE 42 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCC
Confidence 3566766 78887 7888644 57888888888888876
No 80
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.87 E-value=5.8e-06 Score=63.51 Aligned_cols=44 Identities=32% Similarity=0.765 Sum_probs=38.4
Q ss_pred CCCCCCCCCCCCCEEee-----CCCceEEecCCCccCCCCcccCcccCC
Q psy17084 403 INDCSPQPCYNGGKCVD-----GVNWFLCECAPGFAGPDCRININECAS 446 (721)
Q Consensus 403 ~~~C~~~~C~~~g~C~~-----~~g~~~C~C~~Gy~G~~C~~~~~~C~~ 446 (721)
.++|.+.||.++|+|++ ..++|+|.|++||+|..|+++++++..
T Consensus 6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQ 54 (63)
T ss_dssp CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCT
T ss_pred cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccc
Confidence 45677889999999986 678999999999999999988888764
No 81
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.87 E-value=9.3e-07 Score=65.01 Aligned_cols=16 Identities=25% Similarity=0.883 Sum_probs=7.0
Q ss_pred CceeeCCCCCCCCccc
Q psy17084 662 SFFCHCPPDWEGTSCH 677 (721)
Q Consensus 662 ~~~C~C~~G~~G~~C~ 677 (721)
+|+|+|++||+|.+|+
T Consensus 32 ~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 32 VYSCECAIGFMGQRCE 47 (52)
T ss_dssp EEEEECCTTEESTTSC
T ss_pred CEEEECCCCCcCCCCc
Confidence 3444444444444444
No 82
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.79 E-value=1.2e-05 Score=57.10 Aligned_cols=38 Identities=21% Similarity=0.481 Sum_probs=30.1
Q ss_pred ccCCCCC---CCCCCCCeEeeCC--CceeeecCCCCccCCcccC
Q psy17084 680 KLNACKS---NPCKNGGTCVNTG--DLYSCICKEGFVHALLFTR 718 (721)
Q Consensus 680 ~~~~C~~---~~C~~~~~C~~~~--~~~~C~C~~G~~g~~c~~~ 718 (721)
++++|.+ +||.+ |+|++.. ++|.|.|++||+|..|+..
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 4677877 88888 7898644 6788999999999888764
No 83
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.79 E-value=6.1e-06 Score=87.40 Aligned_cols=118 Identities=23% Similarity=0.528 Sum_probs=37.0
Q ss_pred CCCC-CEEeecCCCeEEeccCCCccCcccccCCCCCCCCCCCCcEE-eeCCCCeEEe-cCCCCccccccCCCCCCCCCCC
Q psy17084 574 CQNG-GTCVDKVNSFQCICRDGWEGEICANNKNECEPNPCKNNGTC-IDGHADFTCL-CKNGWKGKTCTSKNGHCDRGTC 650 (721)
Q Consensus 574 C~~~-g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C-~~~~~~~~C~-C~~G~~G~~C~~~~~~C~~~~C 650 (721)
|..+ ..|....++++|.|+++|+|..|+.........|+.++..+ +.....+.|+ |+-++.|..|+... .+|
T Consensus 299 CnGHas~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t-----~~C 373 (426)
T 3zyj_B 299 CNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNEL-----LHC 373 (426)
T ss_dssp CSSSCSCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-------------------
T ss_pred CCCchhhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCc-----ccC
Confidence 4443 47887777799999999999999865554444566654322 2223345664 45556688886543 588
Q ss_pred CCCCeeeecCCCceeeCCCCCCCCccccCccCCCCCCCCCCCCeEeeCCCceeeecCCC
Q psy17084 651 KHGGTCADLGSSFFCHCPPDWEGTSCHIGKLNACKSNPCKNGGTCVNTGDLYSCICKEG 709 (721)
Q Consensus 651 ~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G 709 (721)
.++|+|.+.. +|+|++||+|..|+ ..+|.++|+|....| +|.=+.|
T Consensus 374 ~ngg~C~~~~---~C~C~~G~~G~~Ce--------~c~C~~~g~C~~~~G--qc~~~~~ 419 (426)
T 3zyj_B 374 QNGGTCHNNV---RCLCPAAYTGILCE--------KLRCEEAGSCGSDSG--QGAPPHG 419 (426)
T ss_dssp -----------------------------------------------------------
T ss_pred CCCCCcCCCC---CCcCCCCCcCCCCc--------CCCCCCCCcccCCCC--ccCCCCC
Confidence 9999998765 79999999999887 235777888987655 4544444
No 84
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.64 E-value=1.9e-05 Score=83.56 Aligned_cols=112 Identities=24% Similarity=0.496 Sum_probs=34.8
Q ss_pred CCCC-CEEeeCCCCeEeecCCCCccCCCccCCCCCCCCCCCCCCcceEecCCCcEEe-CCCCCccCCCCcCCCCCCCCCC
Q psy17084 233 CQNG-GTCVDLVDGYKCECTQAWEGSNCQYDADECQKSPCVNAALGCTNLVGDYRCN-CSPGWTGHNCDVNINDCVGQCR 310 (721)
Q Consensus 233 C~~~-~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~~~~C~~~~g~~~C~-C~~G~~G~~C~~~~~~c~~~C~ 310 (721)
|..+ ..|....++++|.|+.+|+|..|+.-.......|+..+....+.....+.|. |+-++.|..|+... .+|.
T Consensus 299 CnGHas~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t----~~C~ 374 (426)
T 3zyj_B 299 CNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNEL----LHCQ 374 (426)
T ss_dssp CSSSCSCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-------------------
T ss_pred CCCchhhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCc----ccCC
Confidence 5544 4788877789999999999999974333333344443311112223345663 55556677776443 5788
Q ss_pred CCCEEeeCCCCeeeecCCCCcCCCcccCCCccCCCCCCCCCEEeeCCC
Q psy17084 311 HGSTCIDLVNDFHCACLPGYTGRTCQTDINDCESSPCVNGGECVDQVN 358 (721)
Q Consensus 311 ~~~~C~~~~~~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~g~C~~~~~ 358 (721)
++++|.+.. +|.|++||+|..|+ ..+|.++|.|+...|
T Consensus 375 ngg~C~~~~---~C~C~~G~~G~~Ce-------~c~C~~~g~C~~~~G 412 (426)
T 3zyj_B 375 NGGTCHNNV---RCLCPAAYTGILCE-------KLRCEEAGSCGSDSG 412 (426)
T ss_dssp ------------------------------------------------
T ss_pred CCCCcCCCC---CCcCCCCCcCCCCc-------CCCCCCCCcccCCCC
Confidence 888887765 89999999998775 345777788876655
No 85
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.39 E-value=5.5e-05 Score=55.54 Aligned_cols=33 Identities=36% Similarity=0.867 Sum_probs=28.1
Q ss_pred CCCCCCCEec--cCCCCceeEeCCCCCccCccCCCC
Q psy17084 17 EPCQNGGTCE--NTAPDQYLCTCPEGFSGINCEVVD 50 (721)
Q Consensus 17 ~~C~~~g~C~--~~~~~~~~C~C~~G~~G~~C~~~~ 50 (721)
+||.|+|+|+ + ..++|+|+|++||+|.+|+..+
T Consensus 12 ~pC~nGG~C~~~~-~~~~~~C~C~~GytG~~Ce~~~ 46 (53)
T 1nql_B 12 GYCLHDGVCMYIE-ALDKYACNCVVGYIGERCQYRD 46 (53)
T ss_dssp CEECTTCEEEEET-TTTEEEEEECTTEESTTSCEEC
T ss_pred CCCCCCeEEeeec-CCCCEEEecCCCCcCCCCCcCC
Confidence 7999999997 4 4578999999999999998644
No 86
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.32 E-value=8.9e-05 Score=54.40 Aligned_cols=32 Identities=31% Similarity=0.837 Sum_probs=28.7
Q ss_pred CCCCCCCCCeee--ecCCceEEecCCCCCCCccC
Q psy17084 54 MMGPCGNGGQCK--ETAGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 54 ~~~~C~~~g~C~--~~~g~~~C~C~~Gy~G~~C~ 85 (721)
..+||.++|+|+ +..++|+|.|++||+|..|+
T Consensus 10 ~~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce 43 (53)
T 1nql_B 10 HDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43 (53)
T ss_dssp TCCEECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred CCCCCCCCeEEeeecCCCCEEEecCCCCcCCCCC
Confidence 357899999998 67789999999999999997
No 87
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.32 E-value=6.8e-05 Score=55.67 Aligned_cols=43 Identities=16% Similarity=0.450 Sum_probs=33.2
Q ss_pred CCCCCC--CCCCCCceeeCCCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCC
Q psy17084 177 DHCNPN--PCLNGAPCFNTQADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECV 229 (721)
Q Consensus 177 ~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~ 229 (721)
|||... +|. +.|+|+.|+|+|.|++||+... ++++|.++++|.
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~--------d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLAD--------NGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECT--------TSSCEEESSSSC
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECC--------CCCeeccCcccc
Confidence 566542 354 5899999999999999998653 567788888875
No 88
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.24 E-value=0.00019 Score=62.94 Aligned_cols=59 Identities=29% Similarity=0.697 Sum_probs=44.6
Q ss_pred CCCCCCEeccCC-CCce-eEeCCCCCccCccCCCCCCCCCCCCCCCCeeeecCCceEEecCCCCCCCccC
Q psy17084 18 PCQNGGTCENTA-PDQY-LCTCPEGFSGINCEVVDNPCMMGPCGNGGQCKETAGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 18 ~C~~~g~C~~~~-~~~~-~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~ 85 (721)
||+|+|+|++.. ..+| +|.|++||+|..|+++++ .+|..+ ....|++.+..+++|..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~----~~C~~g-----~G~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS----KTCYEG-----NGHFYRGKASTDTMGRPCL 62 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS----CCSBCS-----SCTTCCSCCCBBTTSCBBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc----CCCccc-----ccccceeeccccccCCccc
Confidence 799999998732 2455 999999999999997654 123321 2336899999999999886
No 89
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.12 E-value=0.00016 Score=56.31 Aligned_cols=48 Identities=19% Similarity=0.263 Sum_probs=37.2
Q ss_pred ccCCCCCCCCCCCCCceeeCCC-CeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCC
Q psy17084 174 VDHDHCNPNPCLNGAPCFNTQA-DYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECV 229 (721)
Q Consensus 174 ~~~~~C~~~~C~~~~~C~~~~g-~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~ 229 (721)
+|+++|..+.-.....|+++.| +|+|.|++||+... |+++|.+++||.
T Consensus 3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~--------D~~tC~d~dec~ 51 (69)
T 1kli_L 3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLA--------DGVSCTPTVEYP 51 (69)
T ss_dssp SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECT--------TSSCEEECSSSC
T ss_pred cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECC--------CCCcccCccccc
Confidence 4677886544333568999999 89999999998754 677888998874
No 90
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.08 E-value=0.00027 Score=51.93 Aligned_cols=33 Identities=30% Similarity=0.792 Sum_probs=27.2
Q ss_pred cCCCCCC----------CCCCCCCceeeCCCCeEeeCCCCCccCc
Q psy17084 175 DHDHCNP----------NPCLNGAPCFNTQADYYCHCTEDWEGKN 209 (721)
Q Consensus 175 ~~~~C~~----------~~C~~~~~C~~~~g~~~C~C~~G~~G~~ 209 (721)
|||||.. .+|. +.|+|+.|+|+|.|++||++..
T Consensus 3 DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQE 45 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECT
T ss_pred ccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECC
Confidence 6778864 4675 5999999999999999999753
No 91
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.04 E-value=0.00055 Score=60.05 Aligned_cols=59 Identities=27% Similarity=0.682 Sum_probs=44.3
Q ss_pred CCCCCCEEeeCC--Cce-EEecCCCccCCCCcccCcccCCCCCCCCceeeccCCCCCCCCccccCCCccccceeeecCCC
Q psy17084 410 PCYNGGKCVDGV--NWF-LCECAPGFAGPDCRININECASNPCGYGKEILTVQSRSRSPAYLCVSNPAYLVARCVSQSGG 486 (721)
Q Consensus 410 ~C~~~g~C~~~~--g~~-~C~C~~Gy~G~~C~~~~~~C~~~~C~~g~~~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~ 486 (721)
||.++|+|++.. .+| +|.|++||+|..|+++++ .+|.. ..+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~----~~C~~-------------------------------g~G~ 46 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS----KTCYE-------------------------------GNGH 46 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS----CCSBC-------------------------------SSCT
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc----CCCcc-------------------------------cccc
Confidence 799999999874 556 999999999999998764 12222 1233
Q ss_pred ceEeccCCCCCCCcccc
Q psy17084 487 SFKCSCDAGFSGKYCHE 503 (721)
Q Consensus 487 ~~~C~C~~G~~G~~C~~ 503 (721)
+|++.+..++.|..|+.
T Consensus 47 ~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 47 FYRGKASTDTMGRPCLP 63 (122)
T ss_dssp TCCSCCCBBTTSCBBCC
T ss_pred cceeeccccccCCcccC
Confidence 48888888888888763
No 92
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.99 E-value=0.00046 Score=56.58 Aligned_cols=70 Identities=20% Similarity=0.534 Sum_probs=50.2
Q ss_pred CCCCCCCCCCeeee-cCCCceeeCCCCCCCC--ccccCccCCCCCCC--CCCCCeEeeCC-----CceeeecCCCCccCC
Q psy17084 645 CDRGTCKHGGTCAD-LGSSFFCHCPPDWEGT--SCHIGKLNACKSNP--CKNGGTCVNTG-----DLYSCICKEGFVHAL 714 (721)
Q Consensus 645 C~~~~C~~~~~C~~-~~~~~~C~C~~G~~G~--~C~~~~~~~C~~~~--C~~~~~C~~~~-----~~~~C~C~~G~~g~~ 714 (721)
|....|..+|.|.. .++...|+|.+||.|+ .|.....+.|+.++ |..+|.|+.+. +...|+|++||.-++
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~~~ 86 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPL 86 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCCEE
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcccc
Confidence 44456777888876 4677888888888755 34422226787654 99999998874 568999999987443
No 93
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.96 E-value=0.00058 Score=50.12 Aligned_cols=34 Identities=29% Similarity=0.618 Sum_probs=27.9
Q ss_pred CccCCCCC----------CCCCCCCeEeeCCCceeeecCCCCccCC
Q psy17084 679 GKLNACKS----------NPCKNGGTCVNTGDLYSCICKEGFVHAL 714 (721)
Q Consensus 679 ~~~~~C~~----------~~C~~~~~C~~~~~~~~C~C~~G~~g~~ 714 (721)
.+|+||.. .+|. ++|+|++|+|+|.|++||++..
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQE 45 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECT
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECC
Confidence 46788864 5685 5999999999999999999753
No 94
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=96.71 E-value=0.0022 Score=52.85 Aligned_cols=69 Identities=14% Similarity=0.324 Sum_probs=48.8
Q ss_pred CCCCCCCCCCCeeee-cCCCceeeCCCCCCCCccccCccCC-CCCCC--CCCCCeEeeCC-CceeeecCCCCcc
Q psy17084 644 HCDRGTCKHGGTCAD-LGSSFFCHCPPDWEGTSCHIGKLNA-CKSNP--CKNGGTCVNTG-DLYSCICKEGFVH 712 (721)
Q Consensus 644 ~C~~~~C~~~~~C~~-~~~~~~C~C~~G~~G~~C~~~~~~~-C~~~~--C~~~~~C~~~~-~~~~C~C~~G~~g 712 (721)
.|....|..++.|.. .++...|+|..||.++.=.+..+++ |..+. |..+|.|+.+. ..-.|.|+++|.-
T Consensus 12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~ 85 (105)
T 1n1i_A 12 KCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSE 85 (105)
T ss_dssp SCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCC
T ss_pred EecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCc
Confidence 455556777888877 5677788888888755322234466 76544 88899998884 6778999998663
No 95
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.70 E-value=0.001 Score=52.01 Aligned_cols=33 Identities=21% Similarity=0.498 Sum_probs=24.0
Q ss_pred cCCCCCC--CCCCCCCceeeCCCCeEee-CCCCCcc
Q psy17084 175 DHDHCNP--NPCLNGAPCFNTQADYYCH-CTEDWEG 207 (721)
Q Consensus 175 ~~~~C~~--~~C~~~~~C~~~~g~~~C~-C~~G~~G 207 (721)
|||||.. ++|..+++|+|+.|+|+|. +..||.+
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccc
Confidence 5777864 5687778888888888887 4456664
No 96
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.60 E-value=0.0006 Score=49.53 Aligned_cols=33 Identities=15% Similarity=0.471 Sum_probs=28.0
Q ss_pred CceeeCCCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCCC
Q psy17084 188 APCFNTQADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDEC 228 (721)
Q Consensus 188 ~~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C 228 (721)
+.|+|+.|+|+|.|++||+... |+++|.+++|+
T Consensus 10 ~~C~n~~gs~~C~C~~Gy~L~~--------d~~tC~dide~ 42 (51)
T 1kig_L 10 QFCREERSEVRCSCAHGYVLGD--------DSKSCVSTERF 42 (51)
T ss_dssp SCCCEETTEECCCCCTTEEECT--------TSSCEEECSSS
T ss_pred CEeEcCCCCeEEeCCCCcEECC--------CCCccccCCcc
Confidence 5799999999999999998654 66788888886
No 97
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.55 E-value=0.0013 Score=51.53 Aligned_cols=60 Identities=13% Similarity=0.231 Sum_probs=39.6
Q ss_pred CCCCCCC--CCCCCCCeeeecCCCceee-CCCCCCCCccccCccCCCCCCCCCCCCeEeeCCCceeeecCCCCccC
Q psy17084 641 KNGHCDR--GTCKHGGTCADLGSSFFCH-CPPDWEGTSCHIGKLNACKSNPCKNGGTCVNTGDLYSCICKEGFVHA 713 (721)
Q Consensus 641 ~~~~C~~--~~C~~~~~C~~~~~~~~C~-C~~G~~G~~C~~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~ 713 (721)
++++|.. .+|..+++|+|+.++|+|. +..||.++.=. +.+. .++. .+.....|++||.++
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~----~~~~-~~~~--------~~~~~~~C~~Gy~~~ 64 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHG----EGPP-PPVP--------PAQHPNPCPPGYEPD 64 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSC----SSCC-CSSC--------SCSSCCCSCTTEEEE
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccC----Cccc-cccc--------cCccccCCCCCeeeC
Confidence 5789986 4698889999999999998 55788765322 1111 1111 122245899999864
No 98
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.49 E-value=0.0011 Score=49.57 Aligned_cols=29 Identities=31% Similarity=0.784 Sum_probs=24.4
Q ss_pred CCCCCCeeee----cCCceEEecCCCCCCCccC
Q psy17084 57 PCGNGGQCKE----TAGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 57 ~C~~~g~C~~----~~g~~~C~C~~Gy~G~~C~ 85 (721)
||.++|+|+. ..++|.|.|++||+|..|+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence 7999999983 3457899999999999987
No 99
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.46 E-value=0.0033 Score=51.57 Aligned_cols=68 Identities=19% Similarity=0.522 Sum_probs=55.2
Q ss_pred CCCCCCCCCCCCEeccCCCCceeEeCCCCCc--cCccCCCC-CCCCCC--CCCCCCeeeecC-----CceEEecCCCCC
Q psy17084 12 YCGTHEPCQNGGTCENTAPDQYLCTCPEGFS--GINCEVVD-NPCMMG--PCGNGGQCKETA-----GQFQCVCAPGWT 80 (721)
Q Consensus 12 ~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~--G~~C~~~~-~~C~~~--~C~~~g~C~~~~-----g~~~C~C~~Gy~ 80 (721)
.|+. ..|..++.|....++..+|+|.+||. |..|..+. +.|+.+ .|..++.|.... +...|.|.+||.
T Consensus 6 ~C~~-~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 6 QCVK-KQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCCS-CCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred Eecc-CCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 4665 67889999988778999999999998 46776543 578764 499999999875 578999999986
No 100
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.31 E-value=0.0013 Score=60.89 Aligned_cols=35 Identities=29% Similarity=0.895 Sum_probs=18.5
Q ss_pred CCCCCCCCCcEEeeCCCCeEEecCCCCccccccCC
Q psy17084 607 CEPNPCKNNGTCIDGHADFTCLCKNGWKGKTCTSK 641 (721)
Q Consensus 607 C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~ 641 (721)
|.++||.++|+|++..++|+|.|++||+|..||.+
T Consensus 122 c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 122 CQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp CCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 44445555555555555555555555555555443
No 101
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.30 E-value=0.0014 Score=60.66 Aligned_cols=42 Identities=21% Similarity=0.752 Sum_probs=34.7
Q ss_pred CCCCCCCCCCCCEEeecCCCeEEeccCCCccCcccccCCCCCC
Q psy17084 567 NDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANNKNECEP 609 (721)
Q Consensus 567 ~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~ 609 (721)
++|..+||.++++|++..++|+|.|++||+|..|+.. ++|.+
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~-~~c~~ 161 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV-RDDDD 161 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE-CC---
T ss_pred CCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC-cccCC
Confidence 4577889999999999999999999999999999864 46653
No 102
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=96.30 E-value=0.0023 Score=67.17 Aligned_cols=26 Identities=31% Similarity=0.621 Sum_probs=21.8
Q ss_pred eee-ecCCCcccccccCCCCCCCCceeeCCCCccCCcc
Q psy17084 526 FQC-ICRDGWEGEICANSNQSGGSFKCSCDAGFSGKYC 562 (721)
Q Consensus 526 ~~C-~C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C 562 (721)
.+| .|++||+|..|+. |.+||+|...
T Consensus 334 G~C~~C~~n~~G~~Ce~-----------C~~Gyyg~~~ 360 (375)
T 4aqt_A 334 GHCTNCRDNTDGAKCER-----------CRENFFRLGN 360 (375)
T ss_dssp EEECSCTTTEESTTSCE-----------ECSSEECCTT
T ss_pred CCCCCCCCCCcCCCCCC-----------CCcCcccCcC
Confidence 367 4999999999986 9999998753
No 103
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.21 E-value=0.00073 Score=67.40 Aligned_cols=43 Identities=19% Similarity=0.594 Sum_probs=33.3
Q ss_pred cCCCCC--CCCCCCCCceeeCCCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCC
Q psy17084 175 DHDHCN--PNPCLNGAPCFNTQADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDE 227 (721)
Q Consensus 175 ~~~~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~ 227 (721)
|+|||. .++|..++.|+|+.|+|.|.|++||+|+ +..|.++|+
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~Gn----------G~~C~d~d~ 48 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGN----------GRQCVAEGS 48 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEEEC----------SSSEEETTC
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCC----------CCcCCCCCC
Confidence 678887 4789999999999999999999999973 345666665
No 104
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=96.20 E-value=0.0014 Score=47.92 Aligned_cols=35 Identities=20% Similarity=0.388 Sum_probs=29.1
Q ss_pred CCceeeCCC-CeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCC
Q psy17084 187 GAPCFNTQA-DYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECV 229 (721)
Q Consensus 187 ~~~C~~~~g-~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~ 229 (721)
.+.|+++.+ +|+|.|++||+... |+++|+++|||.
T Consensus 10 ~~~C~n~~ggs~~C~C~~Gy~L~~--------Dg~tC~d~dec~ 45 (53)
T 2bz6_L 10 EQYCSDHTGTKRSCRCHEGYSLLA--------DGVSCTPTVEYP 45 (53)
T ss_dssp SSEEEEETTTEEEEECCTTEEECT--------TSSCEEECSSSC
T ss_pred CCEeEcCCCCCEEeeCCCCCEECC--------CCCcccCCcccc
Confidence 357999998 79999999998654 677888999874
No 105
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=96.16 E-value=0.004 Score=65.40 Aligned_cols=26 Identities=31% Similarity=0.552 Sum_probs=21.1
Q ss_pred ceE-ecCCCCcCCccCCCCeeeccCCccccccCCCCCCCCC
Q psy17084 360 FRC-ICPVGFAGQLCENGGTCVNTGDLYSCICKEGFEGPDC 399 (721)
Q Consensus 360 ~~C-~C~~gy~g~~C~~~~~C~~~~~~~~C~C~~G~~G~~C 399 (721)
.+| .|+++|+|..|+ .|.+||+|...
T Consensus 334 G~C~~C~~n~~G~~Ce--------------~C~~Gyyg~~~ 360 (375)
T 4aqt_A 334 GHCTNCRDNTDGAKCE--------------RCRENFFRLGN 360 (375)
T ss_dssp EEECSCTTTEESTTSC--------------EECSSEECCTT
T ss_pred CCCCCCCCCCcCCCCC--------------CCCcCcccCcC
Confidence 366 499999999997 68999998754
No 106
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=96.09 E-value=0.0087 Score=49.35 Aligned_cols=67 Identities=18% Similarity=0.405 Sum_probs=51.9
Q ss_pred CCCCCCCCCCceee-CCCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCC-CCCC--CCCCCCEEeeCC-CCeEeecCCC
Q psy17084 179 CNPNPCLNGAPCFN-TQADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDE-CVSN--PCQNGGTCVDLV-DGYKCECTQA 253 (721)
Q Consensus 179 C~~~~C~~~~~C~~-~~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~-C~~~--~C~~~~~C~~~~-g~~~C~C~~G 253 (721)
|....|..+|.|+. ..|..+|+|..||.++ +..|+.++. |..+ -|..++.|+.+. ..-.|.|.++
T Consensus 13 C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~d----------g~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~ 82 (105)
T 1n1i_A 13 CIDTNVPENAACYRYLDGTEEWRCLLGFKEV----------GGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKE 82 (105)
T ss_dssp CCSSCCCTTEEEEECTTSCEEEEECTTEEEC----------SSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCST
T ss_pred ecCCCCCCCCCeEECCCCCEeEEEECCeecc----------CCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCC
Confidence 44445788899998 7788999999999984 455666676 6543 389999999885 6789999988
Q ss_pred Cc
Q psy17084 254 WE 255 (721)
Q Consensus 254 ~~ 255 (721)
|.
T Consensus 83 ~~ 84 (105)
T 1n1i_A 83 GS 84 (105)
T ss_dssp TC
T ss_pred CC
Confidence 64
No 107
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.09 E-value=0.0024 Score=47.69 Aligned_cols=31 Identities=29% Similarity=0.564 Sum_probs=17.2
Q ss_pred CCCCCCeEee----CCCceeeecCCCCccCCcccC
Q psy17084 688 PCKNGGTCVN----TGDLYSCICKEGFVHALLFTR 718 (721)
Q Consensus 688 ~C~~~~~C~~----~~~~~~C~C~~G~~g~~c~~~ 718 (721)
||.|+|+|+. ..++|.|.|++||+|..|+..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 5666666652 233456666666666666543
No 108
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=95.97 E-value=0.017 Score=60.93 Aligned_cols=77 Identities=29% Similarity=0.680 Sum_probs=55.4
Q ss_pred cEEeCCCCCccCCCCcCCCCCCCCCCCCCEEeeCCCCeeeecCCCCcCCCcc----cCCCccCCCCCCCCC-EEee----
Q psy17084 285 YRCNCSPGWTGHNCDVNINDCVGQCRHGSTCIDLVNDFHCACLPGYTGRTCQ----TDINDCESSPCVNGG-ECVD---- 355 (721)
Q Consensus 285 ~~C~C~~G~~G~~C~~~~~~c~~~C~~~~~C~~~~~~~~C~C~~Gy~G~~C~----~~~~~C~~~~C~~~g-~C~~---- 355 (721)
.+|.|..++.|.+|+ .|.+||.|..-. ...+.|...+|..++ .|..
T Consensus 286 g~C~C~hnT~G~~CE-------------------------rC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~ 340 (403)
T 2y38_A 286 LQCACQHNTCGGSCD-------------------------RCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEV 340 (403)
T ss_dssp EEECCCTTEESSSCC-------------------------EECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHH
T ss_pred eEeECcCcCcCCCCC-------------------------CCCccccCCcccccccCCCccccccccCCCCcccccCccc
Confidence 468999999999887 578888875321 123567777777665 4741
Q ss_pred ------------CCCCceEe-cCCCCcCCccCCCCeeeccCCccccccCCCCCCCCCC
Q psy17084 356 ------------QVNGFRCI-CPVGFAGQLCENGGTCVNTGDLYSCICKEGFEGPDCG 400 (721)
Q Consensus 356 ------------~~~~~~C~-C~~gy~g~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~ 400 (721)
..++.+|. |..+++|..|+ .|.+||+|+.-.
T Consensus 341 ~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CE--------------rC~~GYyg~p~~ 384 (403)
T 2y38_A 341 DRREASQNQDNVYQGGGVCLDCQHHTTGINCE--------------RCLPGFFRAPDQ 384 (403)
T ss_dssp HHTTCCCCTTSCSCCCEEESSCCSSEESTTSC--------------EECTTCEECTTS
T ss_pred ccccccccccccCCCCCCCCCCcCcCcCCCCC--------------cCCCCccCCCCC
Confidence 12456896 99999999998 789999987643
No 109
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=95.96 E-value=0.01 Score=62.59 Aligned_cols=28 Identities=25% Similarity=0.484 Sum_probs=23.9
Q ss_pred CCeeee-cCCCcccccccCCCCCCCCceeeCCCCccCCcc
Q psy17084 524 NSFQCI-CRDGWEGEICANSNQSGGSFKCSCDAGFSGKYC 562 (721)
Q Consensus 524 g~~~C~-C~~G~~G~~C~~~~~~~~~~~C~C~~G~~G~~C 562 (721)
++.+|. |+.+++|..|+. |.+||+|..-
T Consensus 355 ~~G~C~~C~~nt~G~~CEr-----------C~~GYyg~p~ 383 (403)
T 2y38_A 355 GGGVCLDCQHHTTGINCER-----------CLPGFFRAPD 383 (403)
T ss_dssp CCEEESSCCSSEESTTSCE-----------ECTTCEECTT
T ss_pred CCCCCCCCcCcCcCCCCCc-----------CCCCccCCCC
Confidence 466996 999999999996 9999998754
No 110
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.94 E-value=0.0053 Score=55.35 Aligned_cols=59 Identities=31% Similarity=0.702 Sum_probs=41.7
Q ss_pred CCCCCCCEeccCC-CCce-eEeCCCCCccCccCCCCCCCCCCCCCCCCeeeecCC-ceEEecCCCCCCCccC
Q psy17084 17 EPCQNGGTCENTA-PDQY-LCTCPEGFSGINCEVVDNPCMMGPCGNGGQCKETAG-QFQCVCAPGWTGPTCK 85 (721)
Q Consensus 17 ~~C~~~g~C~~~~-~~~~-~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g-~~~C~C~~Gy~G~~C~ 85 (721)
-||+|+|+|+... ...+ +|.|++||.|..|++++++ .|.+..| .|+......+.|..|.
T Consensus 13 cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~----------~C~~g~G~~YrG~~s~T~sG~~Cq 74 (145)
T 2i9a_A 13 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK----------TCYEGNGHFYRGKASTDTMGRPCL 74 (145)
T ss_dssp CCCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSC----------CEECTTCTTCCSCCCBBTTSCBCC
T ss_pred CCCCCCCCcCCCccccCCccccCCCCCCCCceeccccc----------cCCCCCccccccceecCCcCCccc
Confidence 3899999998621 2456 8999999999999876542 3554444 4666666666677664
No 111
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=95.91 E-value=0.0033 Score=46.39 Aligned_cols=39 Identities=18% Similarity=0.576 Sum_probs=28.3
Q ss_pred CCCCC--CCCCCCCEEeeCCCCeEeecCCCCc----cCCCccCCCCCC
Q psy17084 226 DECVS--NPCQNGGTCVDLVDGYKCECTQAWE----GSNCQYDADECQ 267 (721)
Q Consensus 226 ~~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~~~~~C~ 267 (721)
|||.. .+|. +.|++++|+|+|.|++||+ |..|. ++++|.
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~-didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGKACI-PTGPYP 46 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSSCEE-ESSSSC
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCCeec-cCcccc
Confidence 55653 3465 4899999999999999996 45564 666663
No 112
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=95.91 E-value=0.0031 Score=70.07 Aligned_cols=35 Identities=40% Similarity=1.083 Sum_probs=23.0
Q ss_pred CCCCCCCCCCCCeeee-cCCceEEecC-CCCCCCccC
Q psy17084 51 NPCMMGPCGNGGQCKE-TAGQFQCVCA-PGWTGPTCK 85 (721)
Q Consensus 51 ~~C~~~~C~~~g~C~~-~~g~~~C~C~-~Gy~G~~C~ 85 (721)
++|.++||.++|+|++ ..++|+|.|+ +||+|..|+
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 5566666766667764 3466677776 677776666
No 113
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=95.29 E-value=0.0087 Score=46.33 Aligned_cols=41 Identities=29% Similarity=0.687 Sum_probs=30.9
Q ss_pred CCCCCCCCC--CCCCCCEEeeCCC-CeEeecCCCCc----cCCCccCCCCC
Q psy17084 223 DDIDECVSN--PCQNGGTCVDLVD-GYKCECTQAWE----GSNCQYDADEC 266 (721)
Q Consensus 223 ~~~~~C~~~--~C~~~~~C~~~~g-~~~C~C~~G~~----G~~C~~~~~~C 266 (721)
+|+++|..+ .|+ ..|+++.+ +|+|.|++||. |..|. ++++|
T Consensus 3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~-d~dec 50 (69)
T 1kli_L 3 DDQLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEY 50 (69)
T ss_dssp SCCCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTSSCEE-ECSSS
T ss_pred cccccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCCCccc-Ccccc
Confidence 378888753 354 48999998 79999999996 55665 66665
No 114
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=95.27 E-value=0.0077 Score=66.88 Aligned_cols=36 Identities=39% Similarity=1.059 Sum_probs=33.7
Q ss_pred CCCCCCCCCCCCCeeee-cCCceEEecC-CCCCCCccC
Q psy17084 50 DNPCMMGPCGNGGQCKE-TAGQFQCVCA-PGWTGPTCK 85 (721)
Q Consensus 50 ~~~C~~~~C~~~g~C~~-~~g~~~C~C~-~Gy~G~~C~ 85 (721)
+++|.++||.++|+|++ ..++|+|.|+ +||+|..|+
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence 47899999999999999 8899999999 999999998
No 115
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=95.12 E-value=0.009 Score=66.30 Aligned_cols=38 Identities=34% Similarity=0.930 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCCcEEee-CCCCeEEecC-CCCccccccCC
Q psy17084 604 KNECEPNPCKNNGTCID-GHADFTCLCK-NGWKGKTCTSK 641 (721)
Q Consensus 604 ~~~C~~~~C~~~g~C~~-~~~~~~C~C~-~G~~G~~C~~~ 641 (721)
+++|.++||.++|+|++ ..++|+|.|+ +||+|.+|+..
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 46788888888888888 7788888888 88888888753
No 116
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.08 E-value=0.0051 Score=61.30 Aligned_cols=41 Identities=22% Similarity=0.705 Sum_probs=31.5
Q ss_pred CCCCCC--CCCCCCCCEEeeCCCCeEeecCCCCcc--CCCccCCCC
Q psy17084 224 DIDECV--SNPCQNGGTCVDLVDGYKCECTQAWEG--SNCQYDADE 265 (721)
Q Consensus 224 ~~~~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~G--~~C~~~~~~ 265 (721)
|+|||. ..+|..++.|+|+.|+|+|.|++||.| ..|. ++++
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~-d~d~ 48 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV-AEGS 48 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE-ETTC
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC-CCCC
Confidence 789997 578999999999999999999999984 4564 4444
No 117
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=94.97 E-value=0.026 Score=50.78 Aligned_cols=33 Identities=36% Similarity=0.960 Sum_probs=28.1
Q ss_pred CCCCCCEEeeC--CCce-EEecCCCccCCCCcccCc
Q psy17084 410 PCYNGGKCVDG--VNWF-LCECAPGFAGPDCRININ 442 (721)
Q Consensus 410 ~C~~~g~C~~~--~g~~-~C~C~~Gy~G~~C~~~~~ 442 (721)
||.|+|+|+.. ...+ +|.|++||+|..|+++++
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~ 49 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS 49 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESS
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceecccc
Confidence 79999999876 3455 899999999999997764
No 118
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=94.93 E-value=0.014 Score=64.97 Aligned_cols=37 Identities=51% Similarity=1.071 Sum_probs=33.3
Q ss_pred CCCCCCCCCCCCCCEeccCCCCceeEeCC-CCCccCccC
Q psy17084 10 LNYCGTHEPCQNGGTCENTAPDQYLCTCP-EGFSGINCE 47 (721)
Q Consensus 10 ~~~C~~~~~C~~~g~C~~~~~~~~~C~C~-~G~~G~~C~ 47 (721)
||+|.+ +||+|+|+|++...++|.|.|+ +||+|.+|+
T Consensus 1 vd~C~s-~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 1 ANPCCS-NPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CCTTTT-CCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCC-CCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 689998 9999999999634578999999 999999996
No 119
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=94.01 E-value=0.029 Score=40.23 Aligned_cols=30 Identities=30% Similarity=0.815 Sum_probs=23.6
Q ss_pred CCCCCCCCeee--ecCCceEEecCCCCCCCccC
Q psy17084 55 MGPCGNGGQCK--ETAGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 55 ~~~C~~~g~C~--~~~g~~~C~C~~Gy~G~~C~ 85 (721)
.+.|.+ |+|. ...+.+.|.|++||+|+.|+
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCE 44 (50)
T ss_dssp TTSCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred cCcccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence 356887 7886 45567889999999999887
No 120
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=93.91 E-value=0.023 Score=42.44 Aligned_cols=42 Identities=24% Similarity=0.536 Sum_probs=30.0
Q ss_pred CCceeeCC-CCeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCCCCCCCCCCEEee
Q psy17084 187 GAPCFNTQ-ADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECVSNPCQNGGTCVD 241 (721)
Q Consensus 187 ~~~C~~~~-g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~~~~C~~~~~C~~ 241 (721)
.+.|+++. |+|+|.|++||.... |+++|.++++ .||.. .|++
T Consensus 10 ~~~C~n~~~gs~~C~C~~Gy~L~~--------D~~tC~d~~~---~pC~~--~c~n 52 (59)
T 2wph_E 10 EQFCKNSADNKVVCSCTEGYRLAE--------NQKSCEPAVP---FPCGR--VSVS 52 (59)
T ss_dssp SSEEEECSTTCEEEECCTTEEECT--------TSSCEEESSS---SCTTC--CCSC
T ss_pred CCEeEeCCCCCEEeeCCCCcEECC--------CCCcccCCCC---CCCCC--cccc
Confidence 35799999 699999999998654 5667777653 45542 4544
No 121
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=93.68 E-value=0.037 Score=50.97 Aligned_cols=35 Identities=31% Similarity=0.920 Sum_probs=32.2
Q ss_pred CCCCCCCCCCCCeeeecCCceEEecCCCCCCCccC
Q psy17084 51 NPCMMGPCGNGGQCKETAGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 51 ~~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~ 85 (721)
..|...+|..+++|++..++|+|.|++||+|..|+
T Consensus 120 ~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~ 154 (164)
T 3cfw_A 120 ASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ 154 (164)
T ss_dssp CCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSC
T ss_pred CCCCCCcCCCCCeecccCCCceeeeCCCccccccc
Confidence 45777899999999999999999999999999987
No 122
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=93.58 E-value=0.022 Score=52.09 Aligned_cols=35 Identities=31% Similarity=1.003 Sum_probs=21.8
Q ss_pred CCCCCCCCCCCEEeecCCCeEEeccCCCccCcccc
Q psy17084 568 DCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICAN 602 (721)
Q Consensus 568 ~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~ 602 (721)
+|..+||.+++.|.+...+|.|.|.+||+|++|+.
T Consensus 121 ~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 121 ACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp CCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCCCCCEeecCCCCeeEECCCCccCccccc
Confidence 34445666666666666666666666666666654
No 123
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=93.50 E-value=0.024 Score=51.78 Aligned_cols=35 Identities=34% Similarity=1.008 Sum_probs=32.8
Q ss_pred CCCCCCCCCCCCeeeecCCceEEecCCCCCCCccC
Q psy17084 51 NPCMMGPCGNGGQCKETAGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 51 ~~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~ 85 (721)
++|...||.+++.|.+..+.|.|.|.+||+|+.||
T Consensus 120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce 154 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154 (157)
T ss_dssp CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred CCCCCCCCCCCCEeecCCCCeeEECCCCccCcccc
Confidence 67888899999999999999999999999999997
No 124
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=93.33 E-value=0.034 Score=39.87 Aligned_cols=16 Identities=25% Similarity=0.731 Sum_probs=8.6
Q ss_pred CceeeCCCCCCCCccc
Q psy17084 662 SFFCHCPPDWEGTSCH 677 (721)
Q Consensus 662 ~~~C~C~~G~~G~~C~ 677 (721)
.+.|+|++||+|.+|+
T Consensus 29 ~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 29 TPSCVCDEGYIGARCE 44 (50)
T ss_dssp EEEECCCTTEETTTTC
T ss_pred CeEEECCCCcccCCCC
Confidence 3455555555555555
No 125
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.24 E-value=0.056 Score=38.60 Aligned_cols=28 Identities=36% Similarity=0.764 Sum_probs=15.5
Q ss_pred CCCCCCeeeecC--CCceeeCCCCCCCCccc
Q psy17084 649 TCKHGGTCADLG--SSFFCHCPPDWEGTSCH 677 (721)
Q Consensus 649 ~C~~~~~C~~~~--~~~~C~C~~G~~G~~C~ 677 (721)
.|.++ +|..+. +.+.|.|++||+|.+|+
T Consensus 15 yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 15 FCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred cccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 45544 565322 34566666666666665
No 126
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=93.22 E-value=0.029 Score=52.12 Aligned_cols=40 Identities=28% Similarity=0.803 Sum_probs=33.1
Q ss_pred CCCccCccCCCCCCCCCCC-----CCCCCeeeecCCceEEecCCCCC
Q psy17084 39 EGFSGINCEVVDNPCMMGP-----CGNGGQCKETAGQFQCVCAPGWT 80 (721)
Q Consensus 39 ~G~~G~~C~~~~~~C~~~~-----C~~~g~C~~~~g~~~C~C~~Gy~ 80 (721)
.||.+.....++++|...+ |.+ .|+++.|+|+|.|++||+
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred cCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence 6777777666789997654 764 899999999999999998
No 127
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=93.22 E-value=0.045 Score=54.91 Aligned_cols=59 Identities=29% Similarity=0.749 Sum_probs=42.8
Q ss_pred CCCCCCEEeecCCCeEEeccCCCccCcccccCC---------CCCCC----CCCCCcEEeeCCCCeEEecCCCC------
Q psy17084 573 PCQNGGTCVDKVNSFQCICRDGWEGEICANNKN---------ECEPN----PCKNNGTCIDGHADFTCLCKNGW------ 633 (721)
Q Consensus 573 ~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~---------~C~~~----~C~~~g~C~~~~~~~~C~C~~G~------ 633 (721)
+|..+|+|.-. .|.|.+||+|+.|+-..+ .|... .|+.+|+|+-+ +|.|..+|
T Consensus 197 ~C~g~G~~~CG----~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~~~~~~ 268 (280)
T 2p26_A 197 LCHGKGFLECG----ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGKLI 268 (280)
T ss_dssp GGGGSEEEETT----EEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSSTTCEE
T ss_pred ccCCCCeECCC----ceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCCCCeeE
Confidence 37777888754 799999999999873221 57532 49999999865 89998776
Q ss_pred cccccc
Q psy17084 634 KGKTCT 639 (721)
Q Consensus 634 ~G~~C~ 639 (721)
+|..|+
T Consensus 269 ~G~~~~ 274 (280)
T 2p26_A 269 YGQYCE 274 (280)
T ss_dssp ESTTSC
T ss_pred eeEecc
Confidence 455664
No 128
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=93.19 E-value=0.037 Score=43.50 Aligned_cols=34 Identities=35% Similarity=1.006 Sum_probs=23.9
Q ss_pred CCCC---CCCCCCCCeeee--cCCceEEecCCCCCCCccC
Q psy17084 51 NPCM---MGPCGNGGQCKE--TAGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 51 ~~C~---~~~C~~~g~C~~--~~g~~~C~C~~Gy~G~~C~ 85 (721)
++|. .+.|.+ |+|+- ..+.|.|.|++||+|..|+
T Consensus 38 ~pC~~~~~~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 38 DPCLRKYKDFCIH-GECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp -CTTTTTTTCCSS-EEECCBGGGTBCCEEECTTEESTTCC
T ss_pred CCCCccccCcCCC-CEeeeecCCCCeEEEcCCCccccccc
Confidence 4565 567887 48843 3456889999999888886
No 129
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.18 E-value=0.063 Score=38.35 Aligned_cols=30 Identities=30% Similarity=0.793 Sum_probs=23.1
Q ss_pred CCCCCCCCeeeec--CCceEEecCCCCCCCccC
Q psy17084 55 MGPCGNGGQCKET--AGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 55 ~~~C~~~g~C~~~--~g~~~C~C~~Gy~G~~C~ 85 (721)
.+.|.++ +|... .+.+.|.|++||+|+.|+
T Consensus 13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred cCcccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 3568874 88753 367899999999999886
No 130
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=93.16 E-value=0.049 Score=50.15 Aligned_cols=39 Identities=28% Similarity=0.819 Sum_probs=29.2
Q ss_pred CCCCCCCCCCEEeeCCCCeEeecCCCCccCCCccCCCCCC
Q psy17084 228 CVSNPCQNGGTCVDLVDGYKCECTQAWEGSNCQYDADECQ 267 (721)
Q Consensus 228 C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~ 267 (721)
|.+++|..+++|++..++|+|.|.+||.|..|+ .+.+|.
T Consensus 122 ~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~-~~~~c~ 160 (164)
T 3cfw_A 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ-FVQVDP 160 (164)
T ss_dssp CCTTSSCSSEEEEEETTEEEEEECTTCBSSSSC-BC----
T ss_pred CCCCcCCCCCeecccCCCceeeeCCCccccccc-ccccCc
Confidence 455778888899988888999999999999887 445553
No 131
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=93.15 E-value=0.077 Score=37.92 Aligned_cols=29 Identities=31% Similarity=0.773 Sum_probs=22.1
Q ss_pred CCCCCCCeee--ecCCceEEecCCCCCCCccC
Q psy17084 56 GPCGNGGQCK--ETAGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 56 ~~C~~~g~C~--~~~g~~~C~C~~Gy~G~~C~ 85 (721)
+.|.+ |+|. ...+.+.|.|++||+|+.|+
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCccccccc
Confidence 56776 6887 45567889999999988886
No 132
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=93.13 E-value=0.042 Score=51.00 Aligned_cols=36 Identities=28% Similarity=0.780 Sum_probs=29.3
Q ss_pred eeeccCCCCCCCC-----CCCCCceeeCCCCeEeeCCCCCccC
Q psy17084 171 FQCVDHDHCNPNP-----CLNGAPCFNTQADYYCHCTEDWEGK 208 (721)
Q Consensus 171 ~~C~~~~~C~~~~-----C~~~~~C~~~~g~~~C~C~~G~~G~ 208 (721)
|.++++++|...+ |.. .|+++.|+|+|.|++||++.
T Consensus 119 ~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~ 159 (170)
T 1szb_A 119 YAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLH 159 (170)
T ss_dssp EEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEEC
T ss_pred eeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEEC
Confidence 4577888887654 654 79999999999999999854
No 133
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=92.59 E-value=0.15 Score=36.44 Aligned_cols=30 Identities=20% Similarity=0.480 Sum_probs=22.5
Q ss_pred CCCCCCCeEe--eCCCceeeecCCCCccCCccc
Q psy17084 687 NPCKNGGTCV--NTGDLYSCICKEGFVHALLFT 717 (721)
Q Consensus 687 ~~C~~~~~C~--~~~~~~~C~C~~G~~g~~c~~ 717 (721)
+.|.+ |+|+ ...+.+.|.|+.||+|..|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 45776 5886 445567888888888888875
No 134
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=91.50 E-value=0.069 Score=38.46 Aligned_cols=20 Identities=25% Similarity=0.615 Sum_probs=17.3
Q ss_pred CeEeeCCCceeeecCCCCcc
Q psy17084 693 GTCVNTGDLYSCICKEGFVH 712 (721)
Q Consensus 693 ~~C~~~~~~~~C~C~~G~~g 712 (721)
+.|+|++++|+|.|++||+.
T Consensus 10 ~~C~n~~gs~~C~C~~Gy~L 29 (51)
T 1kig_L 10 QFCREERSEVRCSCAHGYVL 29 (51)
T ss_dssp SCCCEETTEECCCCCTTEEE
T ss_pred CEeEcCCCCeEEeCCCCcEE
Confidence 47999999999999999973
No 135
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=91.50 E-value=0.077 Score=41.70 Aligned_cols=36 Identities=25% Similarity=0.531 Sum_probs=24.7
Q ss_pred cCCCC---CCCCCCCCeEee--CCCceeeecCCCCccCCccc
Q psy17084 681 LNACK---SNPCKNGGTCVN--TGDLYSCICKEGFVHALLFT 717 (721)
Q Consensus 681 ~~~C~---~~~C~~~~~C~~--~~~~~~C~C~~G~~g~~c~~ 717 (721)
.++|. .+.|.++ +|+. ..+.+.|.|++||+|..|+.
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcccccccc
Confidence 35665 5678775 8843 34567899999999888874
No 136
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=91.12 E-value=0.1 Score=37.91 Aligned_cols=29 Identities=24% Similarity=0.637 Sum_probs=22.6
Q ss_pred CEEeeCCC-CeEeecCCCCc----cCCCccCCCCC
Q psy17084 237 GTCVDLVD-GYKCECTQAWE----GSNCQYDADEC 266 (721)
Q Consensus 237 ~~C~~~~g-~~~C~C~~G~~----G~~C~~~~~~C 266 (721)
..|+++.+ +|+|.|++||+ |..|. +++||
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~-d~dec 44 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEY 44 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEECTTSSCEE-ECSSS
T ss_pred CEeEcCCCCCEEeeCCCCCEECCCCCccc-CCccc
Confidence 37999888 79999999996 55665 67766
No 137
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=90.95 E-value=0.4 Score=38.43 Aligned_cols=69 Identities=14% Similarity=0.331 Sum_probs=48.3
Q ss_pred CCCCCCCCCCeeeec-CCCceeeCCCCCC--CCccccCccCCCCCCC--CCCCCeEeeCC-CceeeecCCCCccC
Q psy17084 645 CDRGTCKHGGTCADL-GSSFFCHCPPDWE--GTSCHIGKLNACKSNP--CKNGGTCVNTG-DLYSCICKEGFVHA 713 (721)
Q Consensus 645 C~~~~C~~~~~C~~~-~~~~~C~C~~G~~--G~~C~~~~~~~C~~~~--C~~~~~C~~~~-~~~~C~C~~G~~g~ 713 (721)
|....|..++.|... .+.-.|+|..+|. |..|.......|..+. |..+|.|.... ..-.|+|++.+.-+
T Consensus 7 C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~~~ 81 (95)
T 1b9w_A 7 CIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGSEP 81 (95)
T ss_dssp CSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTEEE
T ss_pred cccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCCCc
Confidence 444566777777764 3566788888874 5566654455676654 88899998776 56789999986643
No 138
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=90.12 E-value=0.16 Score=50.88 Aligned_cols=60 Identities=22% Similarity=0.580 Sum_probs=41.9
Q ss_pred CCCCCeeeecCCCceeeCCCCCCCCccccCccC--------CCCCC----CCCCCCeEeeCCCceeeecCCCC------c
Q psy17084 650 CKHGGTCADLGSSFFCHCPPDWEGTSCHIGKLN--------ACKSN----PCKNGGTCVNTGDLYSCICKEGF------V 711 (721)
Q Consensus 650 C~~~~~C~~~~~~~~C~C~~G~~G~~C~~~~~~--------~C~~~----~C~~~~~C~~~~~~~~C~C~~G~------~ 711 (721)
|..+|+|. -..|.|.+||+|+.|++.... .|... .|+.+|+|+-. +|+|.+++ .
T Consensus 198 C~g~G~~~----CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~~~~~~~ 269 (280)
T 2p26_A 198 CHGKGFLE----CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPGKLIY 269 (280)
T ss_dssp GGGSEEEE----TTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSSTTCEEE
T ss_pred cCCCCeEC----CCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCCCCeeEe
Confidence 66566665 346899999999998864322 68532 38888999854 79998875 5
Q ss_pred cCCccc
Q psy17084 712 HALLFT 717 (721)
Q Consensus 712 g~~c~~ 717 (721)
|..|+.
T Consensus 270 G~~~~~ 275 (280)
T 2p26_A 270 GQYCEH 275 (280)
T ss_dssp STTSCE
T ss_pred eEeccc
Confidence 556653
No 139
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=89.84 E-value=0.23 Score=53.21 Aligned_cols=42 Identities=31% Similarity=0.803 Sum_probs=36.4
Q ss_pred CccCCCCCCCCCCCCCCCCeeeecCCceEEecCC-CCCCCccC
Q psy17084 44 INCEVVDNPCMMGPCGNGGQCKETAGQFQCVCAP-GWTGPTCK 85 (721)
Q Consensus 44 ~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~-Gy~G~~C~ 85 (721)
..|+...++|...||.++|+|++..++|+|.|+. ||+|..|+
T Consensus 179 ~gC~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~ 221 (410)
T 3asi_A 179 RGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 221 (410)
T ss_dssp ESCCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred CCCCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence 3465455789999999999999999999999996 99999987
No 140
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=89.33 E-value=0.26 Score=52.67 Aligned_cols=42 Identities=26% Similarity=0.852 Sum_probs=27.9
Q ss_pred ccccCCCCCCCCCCCCCCEEeecCCCeEEeccC-CCccCcccc
Q psy17084 561 YCHENINDCKHNPCQNGGTCVDKVNSFQCICRD-GWEGEICAN 602 (721)
Q Consensus 561 ~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~-G~~G~~C~~ 602 (721)
.|....+.|..+||.++|+|++..++|.|.|+. +|+|..|+.
T Consensus 180 gC~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 180 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp SCCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred CCCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 354445667777777777777777777777764 777777654
No 141
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=89.01 E-value=0.26 Score=45.56 Aligned_cols=32 Identities=34% Similarity=0.976 Sum_probs=26.6
Q ss_pred CCCCCCCCCCCEEeeCCCCeeeecCCCCcCCCccc
Q psy17084 303 NDCVGQCRHGSTCIDLVNDFHCACLPGYTGRTCQT 337 (721)
Q Consensus 303 ~~c~~~C~~~~~C~~~~~~~~C~C~~Gy~G~~C~~ 337 (721)
..|...|.++|.|+... +|.|++||+|..|++
T Consensus 149 ~~C~~~C~ngG~Cv~P~---~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 149 AECPGGCRNGGFCNERR---ICECPDGFHGPHCEG 180 (188)
T ss_dssp CCCTTCCCTTCEECTTS---CEECCTTCBTTTTCB
T ss_pred CccCCCCCCCCEeCCCC---cccCcCCCCCCCCcC
Confidence 45678899999997643 899999999999985
No 142
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=88.87 E-value=0.24 Score=45.80 Aligned_cols=30 Identities=37% Similarity=1.164 Sum_probs=18.9
Q ss_pred CCCCCCCCCCCeeeecCCCceeeCCCCCCCCccc
Q psy17084 644 HCDRGTCKHGGTCADLGSSFFCHCPPDWEGTSCH 677 (721)
Q Consensus 644 ~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~ 677 (721)
.|. .+|.++|.|+ +..+|.|++||+|..|+
T Consensus 150 ~C~-~~C~ngG~Cv---~P~~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 150 ECP-GGCRNGGFCN---ERRICECPDGFHGPHCE 179 (188)
T ss_dssp CCT-TCCCTTCEEC---TTSCEECCTTCBTTTTC
T ss_pred ccC-CCCCCCCEeC---CCCcccCcCCCCCCCCc
Confidence 344 4666666666 34567777777776666
No 143
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=86.72 E-value=0.41 Score=43.50 Aligned_cols=36 Identities=25% Similarity=0.683 Sum_probs=29.2
Q ss_pred eeeccCCCCCC---CCCCCCCceeeCCCCeEeeCCCCCccC
Q psy17084 171 FQCVDHDHCNP---NPCLNGAPCFNTQADYYCHCTEDWEGK 208 (721)
Q Consensus 171 ~~C~~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~G~~G~ 208 (721)
|.++++++|.. .+|. +.|.+..++|+|.|++||++.
T Consensus 112 y~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~ 150 (159)
T 1nzi_A 112 YVATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLH 150 (159)
T ss_dssp EEEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEEC
T ss_pred eecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEEC
Confidence 56788899975 2454 589999999999999999864
No 144
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=86.19 E-value=0.36 Score=35.81 Aligned_cols=20 Identities=30% Similarity=0.718 Sum_probs=16.2
Q ss_pred CeEeeCC-CceeeecCCCCcc
Q psy17084 693 GTCVNTG-DLYSCICKEGFVH 712 (721)
Q Consensus 693 ~~C~~~~-~~~~C~C~~G~~g 712 (721)
+.|++++ ++|.|.|++||..
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L 31 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRL 31 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEE
T ss_pred CEeEeCCCCCEEeeCCCCcEE
Confidence 4788888 5889999998874
No 145
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=84.24 E-value=0.6 Score=57.45 Aligned_cols=43 Identities=26% Similarity=0.871 Sum_probs=34.0
Q ss_pred cccCCCCCCCCCCCCCCEEeecCCCeEEecc-CCCccCcccccC
Q psy17084 562 CHENINDCKHNPCQNGGTCVDKVNSFQCICR-DGWEGEICANNK 604 (721)
Q Consensus 562 C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~-~G~~G~~C~~~~ 604 (721)
|....+.|..+||.++|+|+...++|.|.|+ +||+|..|+...
T Consensus 1013 C~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~~ 1056 (1245)
T 3qcw_A 1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPG 1056 (1245)
T ss_dssp SSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBCC
T ss_pred eecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCCC
Confidence 4444567888889988999888888999998 589998887544
No 146
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=82.81 E-value=0.51 Score=47.55 Aligned_cols=46 Identities=24% Similarity=0.609 Sum_probs=32.6
Q ss_pred CCCCCCC-CCCCCCceeeCCCCeEeeCCCCCccCcCCCCCccCCCCCCCCCCCCC
Q psy17084 176 HDHCNPN-PCLNGAPCFNTQADYYCHCTEDWEGKNCSFPRYKCDNPPCDDIDECV 229 (721)
Q Consensus 176 ~~~C~~~-~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~c~~~~C~~~~~C~ 229 (721)
.|||..+ +-.....|.++.++|+|.|.+||.... +.++|...++|.
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~--------d~~sC~p~~~c~ 48 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGE--------DHKQCVPHDQCA 48 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECT--------TSSCEEECSTTC
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCC--------CCCccccccccc
Confidence 5677654 434457899999999999999997653 455666666654
No 147
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=82.43 E-value=0.55 Score=42.64 Aligned_cols=40 Identities=28% Similarity=0.659 Sum_probs=29.9
Q ss_pred CCCccCccCCCCCCCCC---CCCCCCCeeeecCCceEEecCCCCC
Q psy17084 39 EGFSGINCEVVDNPCMM---GPCGNGGQCKETAGQFQCVCAPGWT 80 (721)
Q Consensus 39 ~G~~G~~C~~~~~~C~~---~~C~~~g~C~~~~g~~~C~C~~Gy~ 80 (721)
.||.......++++|.. .+|. +.|++..++|+|.|++||+
T Consensus 106 ~GF~~~y~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 106 TGFAAYYVATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp CEEEEEEEEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCE
T ss_pred ccceeeeecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcE
Confidence 45554444446788864 3464 5899999999999999998
No 148
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=82.25 E-value=0.3 Score=54.83 Aligned_cols=44 Identities=25% Similarity=0.678 Sum_probs=37.5
Q ss_pred eCCCCCccCccCCCCCCCCCCCCCCCCeeeecCCceEEecCCCCCCCccC
Q psy17084 36 TCPEGFSGINCEVVDNPCMMGPCGNGGQCKETAGQFQCVCAPGWTGPTCK 85 (721)
Q Consensus 36 ~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~ 85 (721)
.|.+||.|.+|.. ...|.. .|+.||+|++. +|+|.+||+|+.|.
T Consensus 521 ~C~~gw~g~dc~i-~~~Cp~-~C~ghG~C~~G----~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDNVYI-GDGCLD-MCSGHGRCVQG----SCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEEEEEEE-ESCSSG-GGGGSEEEETT----EEEECTTEESTTSC
T ss_pred ccCCCcccccccc-cCCCCc-ccCCCcEECCC----CEeeCCCccCCCcC
Confidence 7899999999972 255754 79999999985 79999999999986
No 149
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=81.89 E-value=1 Score=55.52 Aligned_cols=41 Identities=32% Similarity=0.862 Sum_probs=35.5
Q ss_pred ccCCCCCCCCCCCCCCCCeeeecCCceEEecC-CCCCCCccC
Q psy17084 45 NCEVVDNPCMMGPCGNGGQCKETAGQFQCVCA-PGWTGPTCK 85 (721)
Q Consensus 45 ~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~-~Gy~G~~C~ 85 (721)
.|....+.|...||.++|+|+....+|+|.|+ +||+|..|+
T Consensus 1012 gC~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~ 1053 (1245)
T 3qcw_A 1012 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 1053 (1245)
T ss_dssp SSSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSC
T ss_pred eeecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCcc
Confidence 45544578999999999999999999999999 699999986
No 150
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=81.05 E-value=0.33 Score=54.45 Aligned_cols=44 Identities=23% Similarity=0.577 Sum_probs=28.2
Q ss_pred ecCCCCccccccCCCCCCCCCCCCCCCeeeecCCCceeeCCCCCCCCccc
Q psy17084 628 LCKNGWKGKTCTSKNGHCDRGTCKHGGTCADLGSSFFCHCPPDWEGTSCH 677 (721)
Q Consensus 628 ~C~~G~~G~~C~~~~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~G~~C~ 677 (721)
.|.+||.|+.|.. ...|. ..|..+|+|++ .+|+|.+||.|..|.
T Consensus 521 ~C~~gw~g~dc~i-~~~Cp-~~C~ghG~C~~----G~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDNVYI-GDGCL-DMCSGHGRCVQ----GSCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEEEEEEE-ESCSS-GGGGGSEEEET----TEEEECTTEESTTSC
T ss_pred ccCCCcccccccc-cCCCC-cccCCCcEECC----CCEeeCCCccCCCcC
Confidence 5677777777742 24444 36777777763 377777777777666
No 151
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=76.43 E-value=0.76 Score=47.82 Aligned_cols=32 Identities=19% Similarity=0.575 Sum_probs=17.1
Q ss_pred CCCCCCCCCCCCCceeeCCCCeEeeCCCCCccC
Q psy17084 176 HDHCNPNPCLNGAPCFNTQADYYCHCTEDWEGK 208 (721)
Q Consensus 176 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~ 208 (721)
+|||. .+-...+.|+|+.|+|+|.|.+||...
T Consensus 1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~ 32 (349)
T 3v64_C 1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELR 32 (349)
T ss_dssp ---------CCSSEECCC---CCEECCTTEEEC
T ss_pred CcccC-CCCCCcCeeecCCCCeEEECCCCccCC
Confidence 35564 222224589999999999999999864
No 152
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=72.99 E-value=12 Score=30.06 Aligned_cols=72 Identities=19% Similarity=0.445 Sum_probs=48.5
Q ss_pred CCCCCCCCCCcEEeeC-CCCeEEecCCCCc--cccccCCC-CCCCCC--CCCCCCeeeecC-CCceeeCCCCC-----CC
Q psy17084 606 ECEPNPCKNNGTCIDG-HADFTCLCKNGWK--GKTCTSKN-GHCDRG--TCKHGGTCADLG-SSFFCHCPPDW-----EG 673 (721)
Q Consensus 606 ~C~~~~C~~~g~C~~~-~~~~~C~C~~G~~--G~~C~~~~-~~C~~~--~C~~~~~C~~~~-~~~~C~C~~G~-----~G 673 (721)
.|....|..++.|... .+.-+|+|..+|. |..|..+. ..|..+ -|..+|.|+... ..-.|+|...+ .|
T Consensus 6 ~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~~~~~~g 85 (95)
T 1b9w_A 6 RCIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGSEPLFEG 85 (95)
T ss_dssp SCSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTEEEEGGG
T ss_pred ccccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCCCcceee
Confidence 4555567778888764 3567888888886 55665332 245433 488889999877 57889998875 45
Q ss_pred Cccc
Q psy17084 674 TSCH 677 (721)
Q Consensus 674 ~~C~ 677 (721)
-.|+
T Consensus 86 vf~~ 89 (95)
T 1b9w_A 86 VFCS 89 (95)
T ss_dssp TEEE
T ss_pred EEec
Confidence 5554
No 153
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=58.41 E-value=5.7 Score=43.74 Aligned_cols=69 Identities=23% Similarity=0.607 Sum_probs=44.0
Q ss_pred CCCCCEEecCCCCeeeecCCCcc--cccccCCCCCCCCceeeCCCCccCCccccCCCCCCCCCCCCCCEEeecCCCeEEe
Q psy17084 513 CQNGGTCVDKVNSFQCICRDGWE--GEICANSNQSGGSFKCSCDAGFSGKYCHENINDCKHNPCQNGGTCVDKVNSFQCI 590 (721)
Q Consensus 513 C~~~g~C~~~~g~~~C~C~~G~~--G~~C~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~ 590 (721)
|...|......| +|+|.+||+ +..|+. |++||+..... ...|. +|..+.. ....+++.|.
T Consensus 252 C~~dG~w~~p~G--~C~C~~G~e~~~~~C~a-----------C~~g~~k~~~~--~~~C~--~CP~~S~-s~~~Gs~~C~ 313 (536)
T 3fl7_A 252 CAVDGEWLVPIG--QCLCQAGYEKVEDACQA-----------CSPGFFKFEAS--ESPCL--ECPEHTL-PSPEGATSCE 313 (536)
T ss_dssp ECTTSCBCCCBC--CCEECTTEEEETTEEEE-----------CCTTEECCSCC--SSCCE--ECCSSEE-CCCTTCSSCE
T ss_pred EcCCCCEecccC--cEeccCccccCCceeee-----------cCCCCCcccCC--CCccc--cCCCCCC-CCCCCccEEE
Confidence 666677766655 899999998 334443 88998754322 12232 3444333 3346789999
Q ss_pred ccCCCccCc
Q psy17084 591 CRDGWEGEI 599 (721)
Q Consensus 591 C~~G~~G~~ 599 (721)
|..||.-..
T Consensus 314 C~ng~~ra~ 322 (536)
T 3fl7_A 314 CEEGFFRAP 322 (536)
T ss_dssp ECTTCBCCT
T ss_pred EeccccccC
Confidence 999997543
No 154
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=56.29 E-value=5.7 Score=43.72 Aligned_cols=69 Identities=23% Similarity=0.565 Sum_probs=44.9
Q ss_pred CCCCCeeeecCCceEEecCCCCC--CCccCccCCCCCcccccccccCccccccCCCCCCCCCCCCCCCeeccCCCCceee
Q psy17084 58 CGNGGQCKETAGQFQCVCAPGWT--GPTCKIKHNFFPYLQFIPLTTSLFRLLSDLNYCGTHEPCQNGGTCENTAPDQYLC 135 (721)
Q Consensus 58 C~~~g~C~~~~g~~~C~C~~Gy~--G~~C~~~~~~~~~~~c~c~~~~~~~~~~~~~~C~~~~~C~~~g~C~~~~~~~~~C 135 (721)
|+..|......| +|.|.+||. +..|+ .|. +|+++.......|. +|..+.. ....+++.|
T Consensus 252 C~~dG~w~~p~G--~C~C~~G~e~~~~~C~-----------aC~-~g~~k~~~~~~~C~---~CP~~S~--s~~~Gs~~C 312 (536)
T 3fl7_A 252 CAVDGEWLVPIG--QCLCQAGYEKVEDACQ-----------ACS-PGFFKFEASESPCL---ECPEHTL--PSPEGATSC 312 (536)
T ss_dssp ECTTSCBCCCBC--CCEECTTEEEETTEEE-----------ECC-TTEECCSCCSSCCE---ECCSSEE--CCCTTCSSC
T ss_pred EcCCCCEecccC--cEeccCccccCCceee-----------ecC-CCCCcccCCCCccc---cCCCCCC--CCCCCccEE
Confidence 777788877666 699999997 44454 233 66666544344453 3544432 224588999
Q ss_pred eCCCCCcCCc
Q psy17084 136 TCPEGFSGIN 145 (721)
Q Consensus 136 ~C~~Gy~G~~ 145 (721)
+|..||.-..
T Consensus 313 ~C~ng~~ra~ 322 (536)
T 3fl7_A 313 ECEEGFFRAP 322 (536)
T ss_dssp EECTTCBCCT
T ss_pred EEeccccccC
Confidence 9999997543
No 155
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=55.24 E-value=3.8 Score=42.35 Aligned_cols=29 Identities=38% Similarity=0.965 Sum_probs=16.6
Q ss_pred CCCCC-CCCCCCCCeeeecCCceEEecCCCCC
Q psy17084 50 DNPCM-MGPCGNGGQCKETAGQFQCVCAPGWT 80 (721)
Q Consensus 50 ~~~C~-~~~C~~~g~C~~~~g~~~C~C~~Gy~ 80 (721)
++||. ...|. ..|+|+.|+|+|.|++||.
T Consensus 1 i~ec~~~~~C~--~~C~n~~g~~~C~C~~g~~ 30 (349)
T 3v64_C 1 VNECAEEGYCS--QGCTNSEGAFQCWCEAGYE 30 (349)
T ss_dssp --------CCS--SEECCC---CCEECCTTEE
T ss_pred CcccCCCCCCc--CeeecCCCCeEEECCCCcc
Confidence 35675 23465 5899999999999999997
No 156
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=49.42 E-value=6.6 Score=39.21 Aligned_cols=31 Identities=26% Similarity=0.584 Sum_probs=24.1
Q ss_pred CCCCCCC-CCCCCCeeeecCCceEEecCCCCC
Q psy17084 50 DNPCMMG-PCGNGGQCKETAGQFQCVCAPGWT 80 (721)
Q Consensus 50 ~~~C~~~-~C~~~g~C~~~~g~~~C~C~~Gy~ 80 (721)
.|||... +-+..+.|+++.++|+|.|++||.
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~ 33 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYR 33 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEE
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcc
Confidence 4778655 333347899999999999999996
No 157
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=39.33 E-value=24 Score=41.51 Aligned_cols=48 Identities=23% Similarity=0.528 Sum_probs=37.8
Q ss_pred CCCCCCCCCCCCCEEeecCCCeEEeccCCCccCcccccCCCCCCCCCCCC
Q psy17084 566 INDCKHNPCQNGGTCVDKVNSFQCICRDGWEGEICANNKNECEPNPCKNN 615 (721)
Q Consensus 566 ~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~ 615 (721)
.+.|.-+||.++++++.......|.|++||.|..|+..+ +...++..+
T Consensus 497 ~~~c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~~--~~~~~~~v~ 544 (913)
T 3t5o_A 497 FDPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQS--PDYKSNAVD 544 (913)
T ss_dssp TCGGGSCCBTTTBEEEEETTEEEEECCTTBCSTTSCCBC--SSCCCCCBC
T ss_pred cccccCCCCCCCCEeecCCCceEEEccCCccccCccCcc--ccccccccC
Confidence 466777799999999987778899999999999998765 655555443
No 158
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=38.49 E-value=15 Score=39.71 Aligned_cols=27 Identities=26% Similarity=0.682 Sum_probs=16.7
Q ss_pred CCCCCCCeEeeC-CCceeeecCCCCccC
Q psy17084 687 NPCKNGGTCVNT-GDLYSCICKEGFVHA 713 (721)
Q Consensus 687 ~~C~~~~~C~~~-~~~~~C~C~~G~~g~ 713 (721)
+||+.++.|+.+ .+.|.|+|+.||.|.
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~~G~ag~ 54 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCAVGWAGN 54 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEESS
T ss_pred CCCCCCCeeEeCCCCCEecCCCCCCCCC
Confidence 455666666655 445667777777654
No 159
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=38.34 E-value=22 Score=41.88 Aligned_cols=28 Identities=21% Similarity=0.502 Sum_probs=20.3
Q ss_pred CCCceeeCCCCccCCccccCCCCCCCCCCC
Q psy17084 546 GGSFKCSCDAGFSGKYCHENINDCKHNPCQ 575 (721)
Q Consensus 546 ~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~ 575 (721)
+....|+|++||.|..|+... +...++.
T Consensus 515 g~~C~C~C~~g~~G~~Ce~~~--~~~~~~~ 542 (913)
T 3t5o_A 515 GTECLCVCQSGTYGENCEKQS--PDYKSNA 542 (913)
T ss_dssp TTEEEEECCTTBCSTTSCCBC--SSCCCCC
T ss_pred CCceEEEccCCccccCccCcc--ccccccc
Confidence 345679999999999998765 5544443
No 160
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=36.84 E-value=24 Score=35.72 Aligned_cols=23 Identities=17% Similarity=0.391 Sum_probs=18.2
Q ss_pred CCceeeCCC--CeEeeCCCCCccCc
Q psy17084 187 GAPCFNTQA--DYYCHCTEDWEGKN 209 (721)
Q Consensus 187 ~~~C~~~~g--~~~C~C~~G~~G~~ 209 (721)
...|....+ +|+|.|+.||+...
T Consensus 278 s~~C~~~~~~~~~~C~C~~g~~l~~ 302 (318)
T 3sov_A 278 SHLCLMSPVKPFYQCACPTGVKLLE 302 (318)
T ss_dssp SSEEEECSSTTSEEEECSTTCCBCT
T ss_pred ceEEecCCCCCCeEEECCCCCEECC
Confidence 457887765 79999999998754
No 161
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=34.08 E-value=23 Score=38.35 Aligned_cols=39 Identities=23% Similarity=0.658 Sum_probs=25.1
Q ss_pred CCCCCCCC--CCCCCCCEeccCCCCceeEeCCCCCcc--CccC
Q psy17084 9 DLNYCGTH--EPCQNGGTCENTAPDQYLCTCPEGFSG--INCE 47 (721)
Q Consensus 9 ~~~~C~~~--~~C~~~g~C~~~~~~~~~C~C~~G~~G--~~C~ 47 (721)
.++.|... +||..++.|+.+..+.|.|+|+.||.| ..|.
T Consensus 17 ~~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 17 AQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp BCCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred ccccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCCCcccC
Confidence 34456543 577777777765556677777777764 4454
No 162
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=33.61 E-value=18 Score=40.63 Aligned_cols=35 Identities=11% Similarity=0.432 Sum_probs=26.0
Q ss_pred cCCCCCCCCCCCCCceeeCC-CCeEeeCCCCCccCc
Q psy17084 175 DHDHCNPNPCLNGAPCFNTQ-ADYYCHCTEDWEGKN 209 (721)
Q Consensus 175 ~~~~C~~~~C~~~~~C~~~~-g~~~C~C~~G~~G~~ 209 (721)
.+++|..+.-.....|.+.. ++|+|.|++||....
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~ 299 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNA 299 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECT
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecc
Confidence 45677654333456899988 999999999998653
No 163
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=32.72 E-value=23 Score=35.66 Aligned_cols=34 Identities=12% Similarity=0.300 Sum_probs=22.8
Q ss_pred cCCCCCCC---CCCCCCceeeCC------CCeEeeCCCCCccC
Q psy17084 175 DHDHCNPN---PCLNGAPCFNTQ------ADYYCHCTEDWEGK 208 (721)
Q Consensus 175 ~~~~C~~~---~C~~~~~C~~~~------g~~~C~C~~G~~G~ 208 (721)
..++|..+ .-.....|.+.+ ++|+|.|+.||+..
T Consensus 266 ~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~ 308 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLA 308 (316)
T ss_dssp CCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEEC
T ss_pred ccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEEC
Confidence 34566544 212245788764 68999999999864
No 164
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=28.17 E-value=28 Score=39.07 Aligned_cols=32 Identities=19% Similarity=0.426 Sum_probs=21.6
Q ss_pred cCCCCCCCCCCCCeEeeCC-CceeeecCCCCcc
Q psy17084 681 LNACKSNPCKNGGTCVNTG-DLYSCICKEGFVH 712 (721)
Q Consensus 681 ~~~C~~~~C~~~~~C~~~~-~~~~C~C~~G~~g 712 (721)
+++|..++=.....|++++ ++|+|.|++||..
T Consensus 265 ~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l 297 (628)
T 4a0p_A 265 WNECASSNGHCSHLCLAVPVGGFVCGCPAHYSL 297 (628)
T ss_dssp CCTTTTTGGGCSSEEEEETTTEEEEECSTTCEE
T ss_pred ceEeccCCCCcchhhhcCCCCCeeEEcCCCcEe
Confidence 4666654322235788887 8888888888875
No 165
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=27.16 E-value=36 Score=34.12 Aligned_cols=31 Identities=26% Similarity=0.764 Sum_probs=22.4
Q ss_pred cCCCCCC-----CCCCCCeEeeCC------CceeeecCCCCccC
Q psy17084 681 LNACKSN-----PCKNGGTCVNTG------DLYSCICKEGFVHA 713 (721)
Q Consensus 681 ~~~C~~~-----~C~~~~~C~~~~------~~~~C~C~~G~~g~ 713 (721)
.++|..+ .|. +.|++++ ++|+|.|++||...
T Consensus 267 ~n~C~~~~~~ng~Cs--~~C~~~p~~~~~~~~~~C~C~~g~~l~ 308 (316)
T 1ijq_A 267 VNWCERTTLSNGGCQ--YLCLPAPQINPHSPKFTCACPDGMLLA 308 (316)
T ss_dssp CCTTSSSSSGGGGCS--SEEEECCCCSTTCCSEEEECCTTCEEC
T ss_pred cccccccccCCCCcC--cccCCCccccCCCCCeEeeCCCCCEEC
Confidence 4667654 253 5899875 58999999999853
No 166
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=22.60 E-value=50 Score=33.22 Aligned_cols=31 Identities=23% Similarity=0.533 Sum_probs=20.3
Q ss_pred CCCCCCCCCCCCeEeeCCC--ceeeecCCCCcc
Q psy17084 682 NACKSNPCKNGGTCVNTGD--LYSCICKEGFVH 712 (721)
Q Consensus 682 ~~C~~~~C~~~~~C~~~~~--~~~C~C~~G~~g 712 (721)
++|..++-+....|+..++ +|+|.|++||..
T Consensus 268 n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l 300 (318)
T 3sov_A 268 NPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKL 300 (318)
T ss_dssp CTTTTTGGGCSSEEEECSSTTSEEEECSTTCCB
T ss_pred cccccCCCCcceEEecCCCCCCeEEECCCCCEE
Confidence 5554433122347888765 689999999974
Done!