RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17085
(826 letters)
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo
sapiens), beta isoform [TaxId: 9606]}
Length = 294
Score = 256 bits (654), Expect = 2e-79
Identities = 156/205 (76%), Positives = 180/205 (87%), Gaps = 1/205 (0%)
Query: 7 LNLDSIINRLIDI-DARSGRNVNLHESEISALCRVSREIFLSEPMLLELGTPLKICGDIH 65
LN+DSII RL+++ ++ G+NV L E+EI LC SREIFLS+P+LLEL PLKICGDIH
Sbjct: 2 LNIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 61
Query: 66 GQYLDLLMLFDYGKYPPKSRYLFLGDYVDRGSNSLETICLLLAYKIKYPGMFHLLRGNHE 125
GQY DLL LF+YG +PP+S YLFLGDYVDRG SLETICLLLAYKIKYP F LLRGNHE
Sbjct: 62 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 121
Query: 126 CANINKVYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPYLSSIDQI 185
CA+IN++YGFYDECKRRYN+KLWKTFT+CFNC+P+AAIVDEKIFCCHGGLSP L S++QI
Sbjct: 122 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 181
Query: 186 RRISRPTRVPEQGLLCDLLWSDPEK 210
RRI RPT VP+QGLLCDLLWSDP+K
Sbjct: 182 RRIMRPTDVPDQGLLCDLLWSDPDK 206
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A
subunit) {Human (Homo sapiens) [TaxId: 9606]}
Length = 473
Score = 251 bits (643), Expect = 1e-75
Identities = 81/201 (40%), Positives = 122/201 (60%), Gaps = 7/201 (3%)
Query: 8 NLDSIINRLIDIDARSGRNVNLHESEISALCRVSREIFLSEPMLLELGTPLKICGDIHGQ 67
+D + L+ + L ES + I E LL++ P+ +CGDIHGQ
Sbjct: 29 RVDILKAHLM-------KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQ 81
Query: 68 YLDLLMLFDYGKYPPKSRYLFLGDYVDRGSNSLETICLLLAYKIKYPGMFHLLRGNHECA 127
+ DL+ LF+ G P +RYLFLGDYVDRG S+E + L A KI YP LLRGNHEC
Sbjct: 82 FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 141
Query: 128 NINKVYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPYLSSIDQIRR 187
++ + + F ECK +Y+ +++ + F+C+P+AA+++++ C HGGLSP ++++D IR+
Sbjct: 142 HLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRK 201
Query: 188 ISRPTRVPEQGLLCDLLWSDP 208
+ R P G +CD+LWSDP
Sbjct: 202 LDRFKEPPAYGPMCDILWSDP 222
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic
subunit alpha isoform, PP2A-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 288
Score = 230 bits (588), Expect = 5e-70
Identities = 95/203 (46%), Positives = 133/203 (65%), Gaps = 8/203 (3%)
Query: 8 NLDSIINRLIDIDARSGRNVNLHESEISALCRVSREIFLSEPMLLELGTPLKICGDIHGQ 67
LD I +L + L ES++ +LC ++EI E + E+ P+ +CGD+HGQ
Sbjct: 4 ELDQWIEQL-----NECKQ--LSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQ 56
Query: 68 YLDLLMLFDYGKYPPKSRYLFLGDYVDRGSNSLETICLLLAYKIKYPGMFHLLRGNHECA 127
+ DL+ LF G P + YLF+GDYVDRG S+ET+ LL+A K++Y +LRGNHE
Sbjct: 57 FHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESR 116
Query: 128 NINKVYGFYDECKRRY-NVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPYLSSIDQIR 186
I +VYGFYDEC R+Y N +WK FT+ F+ +P+ A+VD +IFC HGGLSP + ++D IR
Sbjct: 117 QITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIR 176
Query: 187 RISRPTRVPEQGLLCDLLWSDPE 209
+ R VP +G +CDLLWSDP+
Sbjct: 177 ALDRLQEVPHEGPMCDLLWSDPD 199
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5
{Human (Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 217 bits (555), Expect = 6e-65
Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 13/207 (6%)
Query: 9 LDSIINRLIDIDARSGRNVNLHESEISALCRVSREIFLSEPMLLELGT----PLKICGDI 64
+ ++ D LH + +E+ L+E + +CGD
Sbjct: 16 MKELMQWYKD-------QKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDT 68
Query: 65 HGQYLDLLMLFDYGKYPPKSR-YLFLGDYVDRGSNSLETICLLLAYKIKYPGMFHLLRGN 123
HGQ+ DLL +F+ P ++ Y+F GD+VDRGS S+E I L +K+ YP FHLLRGN
Sbjct: 69 HGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGN 128
Query: 124 HECANINKVYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHGGLSPY-LSSI 182
HE N+N++YGF E K +Y ++++ F+E F +P+A ++ K+ HGGL ++
Sbjct: 129 HETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTL 188
Query: 183 DQIRRISRPTRVPEQGLLCDLLWSDPE 209
D IR+I R + P+ G +CDLLWSDP+
Sbjct: 189 DDIRKIERNRQPPDSGPMCDLLWSDPQ 215
>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase
{Bacteriophage lambda [TaxId: 10710]}
Length = 219
Score = 73.0 bits (178), Expect = 4e-15
Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 22/134 (16%)
Query: 60 ICGDIHGQYLDLLMLFDYGKYPPKS-RYLFLGDYVDRGSNSLETICLLLAYKIKYPGMFH 118
+ GD+HG Y +L+ D + K + +GD VDRG+ ++E + L F
Sbjct: 17 VVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLEL------ITFPWFR 70
Query: 119 LLRGNHECANINKVYGFYDECKRRYNVKLW------------KTFTECFNCMPVA---AI 163
+RGNHE I+ + + N W K + +P+
Sbjct: 71 AVRGNHEQMMIDGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVS 130
Query: 164 VDEKIFCCHGGLSP 177
D+K CH
Sbjct: 131 KDKKYVICHADYPF 144
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 251
Score = 64.3 bits (155), Expect = 6e-12
Identities = 16/136 (11%), Positives = 33/136 (24%), Gaps = 24/136 (17%)
Query: 60 ICGDIHGQYLDLLML-----FDYGKYPPKSRYLFLGDYVDRGSNSLETICLLLAYKIKYP 114
+ +I G L + +Y LG+ V E I ++ +
Sbjct: 5 VLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVI--KDLTKK 62
Query: 115 GMFHLLRGNHECANINKVYGFYDECK-----------------RRYNVKLWKTFTECFNC 157
++RG ++ D + +
Sbjct: 63 ENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPI 122
Query: 158 MPVAAIVDEKIFCCHG 173
V I ++F +G
Sbjct: 123 YLVDKIGGNEVFGVYG 138
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 51.5 bits (122), Expect = 5e-08
Identities = 17/137 (12%), Positives = 36/137 (26%), Gaps = 8/137 (5%)
Query: 60 ICGDIHGQYLDLLMLFDYGKYPPKSRYLFLGDYVDRGSNSLETICL----LLAYKIKYPG 115
DIHG + + + LGD ++ G + ++ +
Sbjct: 6 FASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAH 65
Query: 116 MFHLLRGNHECANINKVYGFYDECKRRYNVKLWK----TFTECFNCMPVAAIVDEKIFCC 171
+RGN + + F + + + T F + A+ +
Sbjct: 66 KVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPALNQNDVLVY 125
Query: 172 HGGLSPYLSSIDQIRRI 188
P +I
Sbjct: 126 GHTHLPVAEQRGEIFHF 142
>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish
(Pontastacus leptodactylus) [TaxId: 6717]}
Length = 237
Score = 42.3 bits (98), Expect = 1e-04
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 243 VYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIATVA 302
+ V K LHE +D + +DI+LLKL + F + + PI Q A V
Sbjct: 76 IITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIA----LPEQGHTATGDVIVT 131
Query: 303 GWGYYTYTTAISNAKNTLKFPGMS 326
GWG + + + P +S
Sbjct: 132 GWGTTSEGGNTPDVLQKVTVPLVS 155
>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos
taurus) [TaxId: 9913]}
Length = 251
Score = 40.5 bits (93), Expect = 5e-04
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 243 VYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIATVA 302
V+ F+HEK++ +++DIAL+KL V+ + IQ CLP + T
Sbjct: 85 YVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVT-- 142
Query: 303 GWGYYTYTTAISNAKNTLKFPGMSLQ 328
GWG I+ P +
Sbjct: 143 GWGRLYTNGPIAAELQQGLQPVVDYA 168
>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 38.9 bits (89), Expect = 0.001
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 243 VYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIATVA 302
+++ H ++ DIALL+L + ++++ ++PICLP + T
Sbjct: 77 ERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPICLPDASHVFPAGKAIWVTGW 136
Query: 303 GWGYYTY 309
G Y
Sbjct: 137 GHTQYGG 143
>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 235
Score = 37.0 bits (84), Expect = 0.005
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 243 VYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIATVA 302
+++ ++ Y+K +DIA++ L KV +T++IQPICLP + Q I ++A
Sbjct: 72 TRLIDQIVINPHYNKRRKNNDIAMMHLEMKVNYTDYIQPICLP--EENQVFPPGRICSIA 129
Query: 303 GWGYYTYTTAISNAKNTLKFPGMSLQILQWFVDSYHSIHLENYA 346
GWG Y + ++ P +S + Q + Y+ A
Sbjct: 130 GWGALIYQGSTADVLQEADVPLLSNEKCQQQMPEYNITENMVCA 173
>g2pka.1 b.47.1.2 (A:,B:) Kallikrein A {Pig (Sus scrofa) [TaxId:
9823]}
Length = 232
Score = 36.5 bits (83), Expect = 0.007
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 473 GKDPKLSTVLRKLKVKVWSQAECLDYDPEV--EKQICAGGEKGNVDV 517
D + ++ +++ + C D P+ E +CAG G D
Sbjct: 133 PDDFEFPDEIQCVQLTLLQNTFCADAHPDKVTESMLCAGYLPGGKDT 179
Score = 34.6 bits (78), Expect = 0.034
Identities = 16/121 (13%), Positives = 40/121 (33%), Gaps = 4/121 (3%)
Query: 224 FHAEVKLGAHYLSSQLNNAVYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPIC 283
+ L + ++Q + D + D+ LL+L + T+ ++ +
Sbjct: 50 WLGRHNLFENENTAQFFGVTADFPHPGFNLSADGKDYSHDLMLLRLQSPAKITDAVKVLE 109
Query: 284 LPIKQYWQHDFAQAIATVAGWGYYTYTTAISNAKNTLKFPGMSLQILQWFVDSYHSIHLE 343
L Q + +GWG + ++ ++L + D++ E
Sbjct: 110 L----PTQEPELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVTE 165
Query: 344 N 344
+
Sbjct: 166 S 166
>g1h8d.1 b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [TaxId:
9606]}
Length = 289
Score = 37.0 bits (84), Expect = 0.008
Identities = 15/106 (14%), Positives = 35/106 (33%)
Query: 252 HEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIATVAGWGYYTYTT 311
+ + DIAL+KL + V F+++I P+CLP ++ T
Sbjct: 117 PRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET 176
Query: 312 AISNAKNTLKFPGMSLQILQWFVDSYHSIHLENYATEAAISNANNT 357
+ + P + + + + ++ + +
Sbjct: 177 GQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDA 222
>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 228
Score = 36.2 bits (82), Expect = 0.009
Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Query: 243 VYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIATVA 302
+ + H + + +D+ LL+L + T+ ++PI LP ++ +
Sbjct: 67 DFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGST----CLAS 122
Query: 303 GWGYYTYTT-AISNAKNTLKFPGMSLQILQWFVDSYHSIH 341
GWG T + + + + + +
Sbjct: 123 GWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDA 162
>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 240
Score = 36.3 bits (82), Expect = 0.009
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 230 LGAHYLSSQLNNAVY-PVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQ 288
LG + L + +++ F+H Y K+ +DIALL L + + I PICLP
Sbjct: 54 LGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSG 113
Query: 289 YWQHDFAQA--IATVAGWGYYTYTTAISNAKNTLKFPGMSLQILQW 332
+ + QA V GWGY++ + T + + ++
Sbjct: 114 LAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPH 159
>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId:
9606]}
Length = 287
Score = 36.2 bits (82), Expect = 0.013
Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 9/100 (9%)
Query: 244 YPVEKTFLHEKYDKAEIK---------SDIALLKLGRKVQFTNFIQPICLPIKQYWQHDF 294
+E H Y+ K D+AL+KL K+++ I+PICLP +
Sbjct: 71 LEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRAL 130
Query: 295 AQAIATVAGWGYYTYTTAISNAKNTLKFPGMSLQILQWFV 334
T A + L + ++
Sbjct: 131 RLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYI 170
>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo
salar) [TaxId: 8030]}
Length = 222
Score = 35.3 bits (80), Expect = 0.020
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 233 HYLSSQLNNAVYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQH 292
+ ++ + + H Y I +DI L+KL + ++QP+ LP
Sbjct: 54 NIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALP----TSC 109
Query: 293 DFAQAIATVAGWGYYTYTTAISNAKNTLKFPGMSLQ 328
A + TV+GWG +TA SN L P +S
Sbjct: 110 APAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYS 145
Score = 29.2 bits (64), Expect = 1.5
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 462 TRHRFTTIIVPGKDPKLSTVLRKLKVKVWSQAECLDYDPE--VEKQICAGGEKGNVD 516
T + S L+ L + + S ++C + P CAG +G D
Sbjct: 114 TMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKD 170
>d1giqa1 d.166.1.1 (A:3-209) Enzymatic component (Ia) of iota-toxin
{Clostridium perfringens [TaxId: 1502]}
Length = 207
Score = 34.8 bits (80), Expect = 0.023
Identities = 14/122 (11%), Positives = 36/122 (29%), Gaps = 14/122 (11%)
Query: 566 KEEDEFNIKYTLKQDDLNRIKQGLSGKPLKVEEIVDEENAGNNEEIVGHNKKALSEMDKK 625
KE + + + +E + +N
Sbjct: 20 KEAERVEKNLDTLEKEA-------------LELYKKDSEQISNYSQTRQYFYDYQIESNP 66
Query: 626 IKENIEMLKNDLGKMKKTPEIIKYRDMIAKYLPVKISNMEELKSLLNKE-FDQFKMSDLN 684
++ + L+N + K K I Y + E ++ ++ E F++ K + +
Sbjct: 67 REKEYKNLRNAISKNKIDKPINVYYFESPEKFAFNKEIRTENQNEISLEKFNELKETIQD 126
Query: 685 QV 686
++
Sbjct: 127 KL 128
>d1qsda_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Baker's yeast
(Saccharomyces cerevisiae), Rbl2p [TaxId: 4932]}
Length = 102
Score = 30.8 bits (70), Expect = 0.14
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 594 LKVEEIVDEENAGNNEEIVGHNKKALSEMDKKIKENIEMLKNDLGKMKKTPEIIKYRDMI 653
LK ++ VD + EE++ K+ L + +KI+E E L+ L + T ++ R I
Sbjct: 34 LKEDKSVDPYDLKKQEEVLDDTKRLLPTLYEKIREFKEDLEQFLKTYQGTEDVSDARSAI 93
Query: 654 AK 655
Sbjct: 94 TS 95
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus
thermophilus [TaxId: 274]}
Length = 228
Score = 32.4 bits (72), Expect = 0.17
Identities = 5/66 (7%), Positives = 16/66 (24%), Gaps = 1/66 (1%)
Query: 60 ICGDIHGQYLDLLMLFDYGKYPPKSRYLFLGDYVDRGSNSLETICLLLAYKIKYPGMFHL 119
+ G L +G+ + + + S + + ++
Sbjct: 10 ATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYV 69
Query: 120 LRGNHE 125
G +
Sbjct: 70 P-GPQD 74
>d2p61a1 a.24.29.1 (A:34-152) Hypothetical protein TM1646
{Thermotoga maritima [TaxId: 2336]}
Length = 119
Score = 30.8 bits (70), Expect = 0.23
Identities = 7/46 (15%), Positives = 21/46 (45%)
Query: 624 KKIKENIEMLKNDLGKMKKTPEIIKYRDMIAKYLPVKISNMEELKS 669
++ E + N+L + + +Y++ I ++L + + +L
Sbjct: 19 EEAVEEVIDSGNELVRSPTPSNLKRYKNAIKEFLKLIEKKIYKLAG 64
>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 227
Score = 31.6 bits (70), Expect = 0.31
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
Query: 240 NNAVYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIA 299
+ PV K H Y+ I +DI LLKL K + ++ ++P+ + + +
Sbjct: 66 MQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLN--LPRRNVKVKPGDVC 123
Query: 300 TVAGWGYYTYTTAISNAKNTLKFPGMSLQILQWFVDSYHSIHLENYA 346
VAGWG S+ ++ Q + ++ +Y E A
Sbjct: 124 YVAGWGKLGPMGKYSDTLQEVELTVQEDQKCESYLKNYFDKANEICA 170
>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 30.1 bits (66), Expect = 0.92
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Query: 243 VYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIA-TV 301
V+ VE H ++ K DIA+L+L + F + P CLP + + + V
Sbjct: 68 VHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIV 127
Query: 302 AGWGYYTYTTAISNAKNTLKFPGMS 326
+G+G S L+ P +
Sbjct: 128 SGFGRTHEKGRQSTRLKMLEVPYVD 152
>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 235
Score = 29.7 bits (65), Expect = 1.2
Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 5/117 (4%)
Query: 243 VYPVEKTFLHEKYDKAEIKSD--IALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIAT 300
V + H Y+ A K + IALL+L + +++ PIC+ K+Y
Sbjct: 67 KRNVIRIIPHHNYNAAINKYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGY 126
Query: 301 VAGWGYYTYTTAISNAKNTLKFPGMSLQILQWFVDSYHSIHLENYATEAAISNANNT 357
V+GW + L++ + L + S N ++
Sbjct: 127 VSGW---GRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTIYNNMFCAGFHEGGRDS 180
>d1go3f_ a.60.8.2 (F:) RNA polymerase II subunit RBP4 (RpoF)
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 107
Score = 28.2 bits (63), Expect = 1.6
Identities = 16/103 (15%), Positives = 37/103 (35%), Gaps = 10/103 (9%)
Query: 585 IKQGLSGKPLKVEEIVDE-ENAGNNEEIVGHNKKALSEMDK--KIK-ENIEMLKNDLGKM 640
K+ L + + V E + N E+ AL + K K+ E + L +L +
Sbjct: 3 GKKILGERYVTVSEAAEIMYNRAQIGELSYEQGCALDYLQKFAKLDKEEAKKLVEELISL 62
Query: 641 KKTPEIIKYRDMIAKYLPVKISNMEELKSLLNKEFDQFKMSDL 683
+ K + ++++L+++ K ++
Sbjct: 63 GIDEKTA------VKIADILPEDLDDLRAIYYKRELPENAEEI 99
>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen
E) {Cow (Bos taurus) [TaxId: 9913]}
Length = 232
Score = 29.3 bits (64), Expect = 1.6
Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 7/120 (5%)
Query: 227 EVKLGAHYLSSQLNNAVYP---VEKTFLHEKYDKAEIKSD--IALLKLGRKVQFTNFIQP 281
+V LG + S + F+H ++ + IAL+KL R Q + +Q
Sbjct: 44 QVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQL 103
Query: 282 ICLPIKQYWQHDFAQAIATVAGWGYYTYTTAISNAKNTLKFPGMSLQILQWFVDSYHSIH 341
LP + A + GWG + + P + + + ++
Sbjct: 104 ANLPPAGDILPNEAPCYIS--GWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVK 161
>g1fiw.1 b.47.1.2 (L:,A:) Beta-acrosin {Sheep (Ovis aries) [TaxId:
9940]}
Length = 274
Score = 28.6 bits (62), Expect = 2.9
Identities = 30/157 (19%), Positives = 47/157 (29%)
Query: 221 QVRFHAEVKLGAHYLSSQLNNAVYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQ 280
++ F A+ + VEK +HEKY + +DIAL+K+ V +FI
Sbjct: 73 RLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIG 132
Query: 281 PICLPIKQYWQHDFAQAIATVAGWGYYTYTTAISNAKNTLKFPGMSLQILQWFVDSYHSI 340
P CLP + Q S + + L + I
Sbjct: 133 PGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRI 192
Query: 341 HLENYATEAAISNANNTLKFPGMSLQILQWFVDSYKL 377
N + G L +SY +
Sbjct: 193 RSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVV 229
>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 243
Score = 28.5 bits (62), Expect = 2.9
Identities = 20/87 (22%), Positives = 34/87 (39%)
Query: 243 VYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIATVA 302
+ PV + +H ++ A+I +DIALL+L V+ ++ + + LP T
Sbjct: 71 LLPVSRIIVHPQFYTAQIGADIALLELEEPVKVSSHVHTVTLPPASETFPPGMPCWVTGW 130
Query: 303 GWGYYTYTTAISNAKNTLKFPGMSLQI 329
G +K P M I
Sbjct: 131 GDVDNDERLPPPFPLKQVKVPIMENHI 157
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4
[TaxId: 9606]}
Length = 144
Score = 27.9 bits (62), Expect = 3.0
Identities = 15/117 (12%), Positives = 43/117 (36%), Gaps = 14/117 (11%)
Query: 555 SQQTKPGTKDTKEEDEFNIKYTLKQDDLNRIKQGLSGKPLKVEEIVDEENAGNNEEIVGH 614
+Q+ + +T +E + ++ L + + + K + + E++ G
Sbjct: 36 TQELRALMDETMKELKAYKSEL--EEQLTPVAEETRARLSKELQAAQARLGADMEDVRGR 93
Query: 615 NKKALSEMDKKIKENIEMLKNDLGKMKKTPEIIKYRDMIAKYLPVKISNMEELKSLL 671
+ E+ + ++ E L+ L + K R + + + ++L+ L
Sbjct: 94 LVQYRGEVQAMLGQSTEELRVRL-----ASHLRKLRKRLLR-------DADDLQKRL 138
>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens)
[TaxId: 9606]}
Length = 237
Score = 28.1 bits (61), Expect = 3.5
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 243 VYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIATVA 302
+ V++ +H++Y AE DIALLKL V +T+ +PIC + + V
Sbjct: 73 FFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPIC--LPSKGDRNVIYTDCWVT 130
Query: 303 GWGYYTYTTAISNAKNTLKFPGMS 326
GWGY I N K P ++
Sbjct: 131 GWGYRKLRDKIQNTLQKAKIPLVT 154
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936
{Methanococcus jannaschii [TaxId: 2190]}
Length = 165
Score = 27.1 bits (59), Expect = 5.3
Identities = 14/114 (12%), Positives = 27/114 (23%), Gaps = 20/114 (17%)
Query: 60 ICGDIHGQYLDLLMLFDYGKYPPKSRYLFLGDYVDRGSNSLETICLLLAYKIKYPGMFHL 119
I D H ++ + + GD+V +
Sbjct: 5 IMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLFV---------IKEFENLNANIIA 55
Query: 120 LRGNHECANINKVYGFYDECKRRYNVKLWKTFTECFNCMPVAAIVDEKIFCCHG 173
GN++ + ++ + + I D K F HG
Sbjct: 56 TYGNNDGERC-------KLKEWLKDINEENIIDDFISVE----IDDLKFFITHG 98
>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 255
Score = 26.9 bits (58), Expect = 8.6
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 243 VYPVEKTFLHEKYDKAEIKSDIALLKLGRKVQFTNFIQPICLPIKQYWQHDFAQAIATVA 302
V + E +DIAL+ L + T +IQP+CLP Q I TV
Sbjct: 75 VVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLP--AAGQALVDGKICTVT 132
Query: 303 GWGYYTYTTAISNAKNTLKFPGMS 326
GWG Y + + P +S
Sbjct: 133 GWGNTQYYGQQAGVLQEARVPIIS 156
>g1gg6.1 b.47.1.2 (A:,B:,C:) (alpha,gamma)-chymotrypsin(ogen) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 238
Score = 27.0 bits (58), Expect = 8.6
Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 10/89 (11%)
Query: 474 KDPKLSTVLRKLKVKVWSQAECLD-YDPEVEKQICAGGEKGNVDVKEDLRFEEVDSSRRL 532
+ L++ + + S C + +++ + G G D S
Sbjct: 140 RYANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAGASGVSSCMGD--------SGGP 191
Query: 533 TVCQFNDVHHSESFTTIWRNFCSQQTKPG 561
VC+ N + W + + PG
Sbjct: 192 LVCKKNGAWTLVGIVS-WGSSTCSTSTPG 219
>d1nb5i_ d.17.1.2 (I:) Cystatin A (stefin A) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 98
Score = 25.8 bits (57), Expect = 8.9
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 205 WSDPEKAAESQLTIVRQVRFHAEVKLGAHY 234
S+ + A IV +V+ E K Y
Sbjct: 6 LSEAKPATPEIQEIVDKVKPQLEEKTNETY 35
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.405
Gapped
Lambda K H
0.267 0.0432 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,039,740
Number of extensions: 145880
Number of successful extensions: 355
Number of sequences better than 10.0: 1
Number of HSP's gapped: 347
Number of HSP's successfully gapped: 42
Length of query: 826
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 733
Effective length of database: 1,130,706
Effective search space: 828807498
Effective search space used: 828807498
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.5 bits)