BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17089
(419 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|398836196|ref|ZP_10593542.1| ribosome-associated GTPase EngA [Herbaspirillum sp. YR522]
gi|398213200|gb|EJM99794.1| ribosome-associated GTPase EngA [Herbaspirillum sp. YR522]
Length = 446
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 259/420 (61%), Positives = 333/420 (79%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GIMHEM KQTKQA++E+D+++FIVDGRQGL DK IT+FLRK G+P++LV+NK
Sbjct: 61 EPVAKEGIMHEMAKQTKQAVVEADVVVFIVDGRQGLTPHDKTITDFLRKCGRPVLLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE + +S++ DFYELG+G+P++ISA +G+G+ + +E L + + + E
Sbjct: 121 SEGMKYTSVTADFYELGMGDPYVISAAHGDGVADLVEEALNV---VEANRPEAEPEPEGQ 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+ FE + ++Y LIDTAG
Sbjct: 178 VRGIKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFERDGQQYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+V
Sbjct: 238 IRRRGKVFEAIEKFSVVKTLQSISDANVVLLLLDAQQDISEQDAHIAGFILESGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +QR IKN+I +KLNFLSFA +F+SA+K + I M+SIN Y ++ +L
Sbjct: 298 VNKWDGLQSDQRDAIKNDIDRKLNFLSFANTHFVSALKNSGIGPVMKSINSAYAAATANL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST R+TRAL A+++ P RK IRPKLRYAHQGG+NPP++VIHGN L I ++YKRYLE
Sbjct: 358 STPRLTRALEQAVEHQQPPRKGSIRPKLRYAHQGGQNPPVVVIHGNALDAINDNYKRYLE 417
>gi|300312253|ref|YP_003776345.1| GTP-binding protein [Herbaspirillum seropedicae SmR1]
gi|300075038|gb|ADJ64437.1| GTP-binding protein [Herbaspirillum seropedicae SmR1]
Length = 447
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/420 (60%), Positives = 330/420 (78%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GIM+EM KQTKQA++E+D+++FIVDGRQGL DK IT+FLRK G+P++LV+NK
Sbjct: 61 EPVAKDGIMYEMAKQTKQAVVEADVVVFIVDGRQGLTPHDKTITDFLRKCGRPVLLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE + +S++ DFYELG+G+P++ISA +G+G+ + + L + + + E T +
Sbjct: 121 SEGMKYTSVTADFYELGMGDPYVISAAHGDGVADLVTEALDVAEAQRTPEPEPEETAVRG 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
K+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+ FE + Y LIDTAG
Sbjct: 181 T---KIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFEREGRHYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K FE IEKFSV+KTLKSI +ANVV+LLLDAQQ+IS QD +IA F+ ESGR+L+V
Sbjct: 238 IRRRGKVFEAIEKFSVVKTLKSISDANVVLLLLDAQQDISEQDAHIAGFVLESGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +QR IK ++++KLNFLSFA F+FISA+K I M+SI+ Y +++ L
Sbjct: 298 VNKWDGMESDQRNQIKMDLERKLNFLSFAKFHFISALKSTGIGPLMKSIDSAYAAAMAKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST R+TRAL A+++ P RK IRPKLRYAHQGG+NPP++VIHGN L+ I ++YKRYLE
Sbjct: 358 STPRLTRALEEALEHQQPRRKGSIRPKLRYAHQGGQNPPVVVIHGNALEAIDDNYKRYLE 417
>gi|340787109|ref|YP_004752574.1| GTP-binding protein [Collimonas fungivorans Ter331]
gi|340552376|gb|AEK61751.1| GTP-binding protein [Collimonas fungivorans Ter331]
Length = 447
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/420 (61%), Positives = 331/420 (78%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GIMHEM KQTKQA+ E+DI+IFIVDGRQGL DK IT+FLRKSG+ ++LV+NK
Sbjct: 61 EPVAKDGIMHEMAKQTKQAVAEADIVIFIVDGRQGLTPHDKTITDFLRKSGRSVMLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE + +S++ +FYELG+G+P++ISA +G+G+ + +E L + + +E
Sbjct: 121 SEGMKYTSVTAEFYELGMGDPYVISAAHGDGVTDLVEESLDLAFSQRP---SEEPEPEDK 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+ FE + KKY LIDTAG
Sbjct: 178 ERGIKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFERDGKKYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K FE IEKFSV+KTL+SI EANVV+LLLDAQQ+IS QD +IA F+ E+GR+L+V
Sbjct: 238 IRRRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDISEQDAHIAGFVLETGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + ++R IK ++ +KLNFLSFA F+FISA+K I M+SI+ Y +++ +L
Sbjct: 298 VNKWDGLTSDRRDEIKMDMDRKLNFLSFAKFHFISALKSTGITPLMKSIDSAYAAAMSNL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T ++TRALI A+++ P RK IRPKLRYAHQGG NPPI+VIHGN L+ I ++YKRYLE
Sbjct: 358 TTPKLTRALIEAVEHQQPRRKGSIRPKLRYAHQGGMNPPIVVIHGNALESIEDNYKRYLE 417
>gi|409406674|ref|ZP_11255136.1| GTP-binding protein [Herbaspirillum sp. GW103]
gi|386435223|gb|EIJ48048.1| GTP-binding protein [Herbaspirillum sp. GW103]
Length = 447
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 257/421 (61%), Positives = 332/421 (78%), Gaps = 6/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG+G +G++ F++IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGQGRVGERPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GIM+EM KQTKQA++E+DI++FIVDGRQGL DK IT+FLRK G+ ++LV+NK
Sbjct: 61 EPVAKDGIMYEMAKQTKQAVVEADIVVFIVDGRQGLTPHDKTITDFLRKCGRSVLLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
SE + +S++ DFYELG+G+P++ISA +G+G+ + +E L IE + + +E
Sbjct: 121 SEGMKYTSVTADFYELGMGDPYVISAAHGDGVADLVEEALDQIEAQRAQEPEAEE----P 176
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
++ K+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+ FE + Y LIDTA
Sbjct: 177 AMRGTKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFEREGRHYTLIDTA 236
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRRR K FE IEKFSV+KTLKSI +ANVV+LLLDAQQ+IS QD +IA F+ ESGR+L+V
Sbjct: 237 GIRRRGKVFEAIEKFSVVKTLKSISDANVVLLLLDAQQDISEQDAHIAGFVLESGRALVV 296
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + +QR IK ++++KLNFLSFA F+FISA+K I M+SI+ Y +++
Sbjct: 297 GVNKWDGMESDQRNQIKMDLERKLNFLSFAKFHFISALKSTGIGPLMKSIDSAYAAAMAK 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
LST R+TRAL A+++ P RK IRPKLRYAHQGG+NPP++VIHGN L+ I ++YKRYL
Sbjct: 357 LSTPRLTRALEEALEHQQPRRKGSIRPKLRYAHQGGQNPPVVVIHGNALEAIDDNYKRYL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|152981185|ref|YP_001353813.1| GTP-binding protein EngA [Janthinobacterium sp. Marseille]
gi|166198722|sp|A6SZW6.1|DER_JANMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|151281262|gb|ABR89672.1| GTP-binding protein EngA [Janthinobacterium sp. Marseille]
Length = 447
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 255/420 (60%), Positives = 334/420 (79%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1 MKPVIALIGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GIMHEM KQTKQA+ E+D++IFIVDGRQGL DK IT+FLRKSG+ ++LV+NK
Sbjct: 61 EPVAKEGIMHEMAKQTKQAVAEADVVIFIVDGRQGLTPHDKTITDFLRKSGRSVMLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P++ISA +G+G+ + +E L I + ++ +N S
Sbjct: 121 AEGMKYTTVTADFYELGMGDPYVISAAHGDGVNDLVEEALNIAFAQRPPEEEAPASNDRS 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I K+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+ FE + K Y LIDTAG
Sbjct: 181 I---KLAIVGRPNVGKSTLVNTLLGEERVIAFDLPGTTRDSIEIPFERDGKHYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K FE IEKFSV+KTL+SI EANVV+LLLDAQQ+IS QD +IA FI ESGR+L+V
Sbjct: 238 IRRRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDISEQDAHIAGFILESGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + ++R IK ++++KL+FLSFA +F+SA+K + I M+S++ Y +++ +L
Sbjct: 298 VNKWDGLTSDRRDEIKMDLERKLSFLSFAKTHFVSALKSSGIGPMMKSVDGAYAAAMSNL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TRALI A+++ P RK IRPKLRYAHQGG NPPI+VIHGN L+ I +YKR+LE
Sbjct: 358 STPKLTRALIEAVEHQQPRRKGSIRPKLRYAHQGGMNPPIVVIHGNALEAIDANYKRFLE 417
>gi|399018047|ref|ZP_10720233.1| ribosome-associated GTPase EngA [Herbaspirillum sp. CF444]
gi|398102012|gb|EJL92204.1| ribosome-associated GTPase EngA [Herbaspirillum sp. CF444]
Length = 447
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 251/420 (59%), Positives = 334/420 (79%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GIM+EM KQTKQA++E+D+++FIVDGRQGL DK IT+FLRKSG+ ++LV+NK
Sbjct: 61 EPVAKEGIMYEMAKQTKQAVVEADVVVFIVDGRQGLTPHDKTITDFLRKSGRSVMLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +S++ DFYELG+G+P++ISA +G+G+ + ++ L I + + ++ +
Sbjct: 121 AEGMKYTSVTADFYELGLGDPYVISAAHGDGVADLVDEALDIAVAQRPDLGEE----VDV 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+ FE + K+Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFERDGKQYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K FE IEKFSV+KTL+SI E NVV+LLLDAQQ+IS QD +IA F+ ESGR+L+V
Sbjct: 237 IRRRGKVFEAIEKFSVVKTLQSISETNVVLLLLDAQQDISEQDAHIAGFVLESGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + ++R IK ++++KL+FLSFA F+FISA+K I M+SI+ Y +++ +L
Sbjct: 297 VNKWDGLQSDRRDEIKMDLERKLSFLSFAKFHFISALKSTGIGPLMKSIDSAYAAAMSNL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T ++TRALI A+++ P RK IRPKLRYAHQGG NPP++VIHGN L+ + + YKRYLE
Sbjct: 357 TTPKLTRALIEAVEHQQPRRKGSIRPKLRYAHQGGMNPPVVVIHGNALEGVDDSYKRYLE 416
>gi|445498326|ref|ZP_21465181.1| GTP-binding protein EngA [Janthinobacterium sp. HH01]
gi|444788321|gb|ELX09869.1| GTP-binding protein EngA [Janthinobacterium sp. HH01]
Length = 448
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 249/421 (59%), Positives = 326/421 (77%), Gaps = 6/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GIMHEM KQTKQA+ E+DI++F+VDGRQGL DK IT+FLRKSG+P++LV+NK
Sbjct: 61 EPVAKEGIMHEMAKQTKQAVAEADIVVFLVDGRQGLTPHDKTITDFLRKSGRPVMLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE + +++ DFYELG+G P+ IS+ +G+G+ + ++ L + + ++ +
Sbjct: 121 SEGMRYTAVVADFYELGLGEPYSISSAHGDGVADLVDEALDLAFAQRP----EDAAELEK 176
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
++ IK+A+VG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI+ FE + K+Y LIDTA
Sbjct: 177 TDHGIKIALVGRPNVGKSTLINTLVGEERVIAFDMPGTTRDSIEIPFERDGKQYTLIDTA 236
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRRR K FE IEKFSV+KTL+SI EANVV+L+LDAQQ+IS QD +IA F+ E+GR+L++
Sbjct: 237 GIRRRGKVFEAIEKFSVVKTLQSISEANVVVLMLDAQQDISEQDAHIAGFVLETGRALVI 296
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + ++R IK +I +KL+FL FA +FISA+K I M+S++ Y ++
Sbjct: 297 AVNKWDGLRTDERDEIKIDIDRKLDFLGFAKMHFISALKAQGIGPLMKSLDQAYAAAFAD 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
LST ++TRALI A++ P RK IRPKLRYAHQGG NPP+IVIHGN L +G YKRYL
Sbjct: 357 LSTPKLTRALIEAVEKQEPRRKGSIRPKLRYAHQGGMNPPVIVIHGNALDAVGEPYKRYL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|395763286|ref|ZP_10443955.1| GTP-binding protein Der [Janthinobacterium lividum PAMC 25724]
Length = 448
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 253/421 (60%), Positives = 328/421 (77%), Gaps = 6/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GIMH+M QTKQA+ E+D+++FIVDGRQGL DK I +FLRKSG+P++LV+NK
Sbjct: 61 EPVAKEGIMHQMALQTKQAVAEADVVVFIVDGRQGLTPHDKTIVDFLRKSGRPVLLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE + +++ +FYELG+G+P+ IS+ +G+G+ + +E +L + + E +
Sbjct: 121 SEGMRYTAVVSEFYELGMGDPYAISSAHGDGVNDLVEVMLDLAFAQRP----DEPEELEK 176
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ IK+A+VG+PNVGKSTLIN+LLGE RVI +D PGTTRDSI+ FE + ++Y LIDTA
Sbjct: 177 TDRGIKIALVGRPNVGKSTLINTLLGEERVIAFDMPGTTRDSIEIPFERDGQQYTLIDTA 236
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRRR K FE IEKFSV+KTL+SI EANVV+L+LDAQQ+IS QD +IA FI ESGR+L+V
Sbjct: 237 GIRRRGKVFEAIEKFSVVKTLQSISEANVVVLMLDAQQDISEQDAHIAGFILESGRALVV 296
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + ++R IK +I +KL+FLSFA +FISA+K NI M+S+N Y +++
Sbjct: 297 AVNKWDGLQSHERDEIKIDIDRKLDFLSFAQMHFISALKGTNIAPLMKSLNAAYAAAMCD 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
LST ++TRALI A++ P RK IRPKLRYAHQGG NPP+IVIHGN L +G+ YKRYL
Sbjct: 357 LSTPKLTRALIEAVEKQEPRRKGSIRPKLRYAHQGGMNPPVIVIHGNALDAVGDPYKRYL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|134094495|ref|YP_001099570.1| GTP-binding protein EngA [Herminiimonas arsenicoxydans]
gi|166198721|sp|A4G4K6.1|DER_HERAR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|133738398|emb|CAL61443.1| GTP-binding protein EngA [Herminiimonas arsenicoxydans]
Length = 447
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 254/420 (60%), Positives = 328/420 (78%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRMGERPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GIMHEM KQTKQA+ E+D++IFIVDGRQGL DK IT+FLRKSG+ ++LV+NK
Sbjct: 61 EPVAKEGIMHEMAKQTKQAVAEADVVIFIVDGRQGLTPHDKTITDFLRKSGRSVMLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + + ++ DFYELG+G+P++ISA +G+G+ + +E L I + +E
Sbjct: 121 AEGMKYTMVTADFYELGLGDPYVISAAHGDGVSDLVEESLDIAFAQRP---PEEEVPESK 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI+ FE K Y LIDTAG
Sbjct: 178 DRSIRLAIVGRPNVGKSTLVNTLLGEERVIAFDLPGTTRDSIEIPFEREGKLYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K FE IEKFSV+KTL+SI EANVV+LLLDAQQ+IS QD +IA FI ESGR+L+V
Sbjct: 238 IRRRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDISEQDAHIAGFILESGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + ++R IK ++++KL FLSFA +F+SA+K + I M+S+++ Y +++ +L
Sbjct: 298 VNKWDGLTSDRRDEIKIDLERKLGFLSFAKTHFVSALKSSGIGPMMKSVDNAYAAAMSNL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TRALI A+++ P RK IRPKLRYAHQGG NPPI+VIHGN L I +YKR+LE
Sbjct: 358 STPKLTRALIEAVEHQQPRRKGSIRPKLRYAHQGGMNPPIVVIHGNALDAIDANYKRFLE 417
>gi|427401453|ref|ZP_18892525.1| GTPase Der [Massilia timonae CCUG 45783]
gi|425719562|gb|EKU82494.1| GTPase Der [Massilia timonae CCUG 45783]
Length = 445
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/421 (59%), Positives = 325/421 (77%), Gaps = 6/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG IG++ F++IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRIGERPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GIMHEM QT+QA+ E+D+++FIVDGRQGL DK IT++LRKSG+ ++LV+NK
Sbjct: 61 EPVAKEGIMHEMALQTRQAVAEADVVVFIVDGRQGLTPHDKTITDYLRKSGRKVMLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE + +S++ DFYELG+G+P++ISA +G+G+ + + L I + E +
Sbjct: 121 SEGMKYTSVTADFYELGMGDPYVISAAHGDGVHDLVNEALDIAFAQRP----DEPEELEP 176
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
++ K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+ FE + KKY LIDTA
Sbjct: 177 ADHGFKIAIVGRPNVGKSTLINTLVGEQRVIAFDMPGTTRDAIEVPFERDGKKYTLIDTA 236
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRRR K FE IEKFSV+KT++SI +ANVVILLLDAQQ+IS QD +IA FI ESGR+L+V
Sbjct: 237 GIRRRGKIFEAIEKFSVVKTMQSISDANVVILLLDAQQDISEQDAHIAGFILESGRALVV 296
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + +QR +KN++ +KL+FL FA +F+SA++ I+ ++S+ Y ++ +
Sbjct: 297 AVNKWDGLQTDQRDQVKNDLDRKLDFLGFAKTHFVSALRGTGISQLLKSVESAYAAATAN 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
LST R+TRAL A++ P RK RPK+RYAHQGG+NPPIIVIHGN L+ I YKRYL
Sbjct: 357 LSTPRLTRALQEAVEKQEPKRKGTSRPKMRYAHQGGQNPPIIVIHGNALEGITEPYKRYL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|237747713|ref|ZP_04578193.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13]
gi|229379075|gb|EEO29166.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13]
Length = 446
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 245/422 (58%), Positives = 332/422 (78%), Gaps = 6/422 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SR ALVA+YPGLTRDRHYGEG +G + F++IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRAALVADYPGLTRDRHYGEGRMGDRPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP VK+G+M EM KQTKQA+ E+D++IFIVDGRQG+ DK IT++LRKSG+P++L +NK
Sbjct: 61 EPVVKEGVMQEMAKQTKQAVAEADVVIFIVDGRQGITPHDKAITDYLRKSGRPVILAVNK 120
Query: 121 SENIN-SSISLDFYELGIG-NPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
+E + +++ DFYELG+G +P +IS+ +G+G+ L+ L + +P + E +
Sbjct: 121 AEGMKYTAVVADFYELGLGSDPLVISSAHGDGVHTLLDEALKM-VPLSPAETEDEIES-- 177
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
++IK+AIVG+PNVGKST+IN+LLGE RVI +D PGTTRD+I+ FE + K+Y L+DTA
Sbjct: 178 GQKHIKLAIVGRPNVGKSTMINALLGEERVIAFDLPGTTRDAIEIPFERDGKQYTLVDTA 237
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+R+R K F+ IEKFSV+KTL++I EANVV+LL+DAQQ+IS QD +IA F+ ESGR+L+V
Sbjct: 238 GLRKRGKVFQAIEKFSVVKTLQAISEANVVLLLMDAQQDISEQDAHIAGFVLESGRALVV 297
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + ++RK IK+ +++KL+FLSFA F+++SA+K I++ M SI+ Y +++
Sbjct: 298 GINKWDGLDQDKRKEIKSEVERKLHFLSFAKFHYVSALKSTGISALMRSIDSAYAAAMAK 357
Query: 359 LSTSRITRALISAIKNHPPCRKK-LIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
LST R+TR L A+++ P RK+ RPKLRYAHQGG+NPPIIVIHGN L I +DYKRY
Sbjct: 358 LSTPRLTRVLEEAVEHQQPPRKQGGTRPKLRYAHQGGQNPPIIVIHGNSLDAISDDYKRY 417
Query: 418 LE 419
LE
Sbjct: 418 LE 419
>gi|237745515|ref|ZP_04575995.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS]
gi|229376866|gb|EEO26957.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS]
Length = 445
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/421 (57%), Positives = 330/421 (78%), Gaps = 5/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SR ALVA+YPGLTRDRHYGEG +G + F++IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRAALVADYPGLTRDRHYGEGRMGDRPFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP VK+G++ EM KQTKQA+ ESD+++F+VDGRQG+ DK IT++LRK G+P++LV+NK
Sbjct: 61 EPVVKEGVLQEMAKQTKQAVAESDVVVFMVDGRQGITPHDKAITDYLRKCGRPVILVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +++ DFYELG+G+P +IS+ +G+G+ LE L ++PY + E
Sbjct: 121 AEGMKYTAVVADFYELGLGDPLVISSAHGDGVHTLLEEALG-KVPYAP--AETEDGIAGE 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++A+VG+PNVGKST+IN+LLGE RVI +D PGTTRD+I+ FE + K Y L+DTAG
Sbjct: 178 QRPVRLAVVGRPNVGKSTMINALLGEERVIAFDLPGTTRDAIEIPFERDGKHYTLVDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K F+ IEKFSV+KTL++I EANVV+LLLDAQQ+IS QD +IA F+ ESGR+L+V
Sbjct: 238 LRKRGKVFQAIEKFSVVKTLQAISEANVVLLLLDAQQDISEQDAHIAGFVLESGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++R+ +K +++KL+FLSFA F+++SA+K I + M S++ Y +++ L
Sbjct: 298 INKWDGLPPDKRREVKAEVERKLHFLSFAKFHYVSALKATGIGALMRSVDAAYAAAMAKL 357
Query: 360 STSRITRALISAIKNH-PPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST R+TR L A+++ PP R+ IRPKLRYAHQGG+NPPIIVIHGN L+ +G+DYKRYL
Sbjct: 358 STPRLTRVLEEAVEHQAPPRRQGSIRPKLRYAHQGGQNPPIIVIHGNSLENVGDDYKRYL 417
Query: 419 E 419
E
Sbjct: 418 E 418
>gi|393778490|ref|ZP_10366763.1| EngA protein [Ralstonia sp. PBA]
gi|392714528|gb|EIZ02129.1| EngA protein [Ralstonia sp. PBA]
Length = 447
Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/420 (57%), Positives = 321/420 (76%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG IG++ FI+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRIGERPFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GIM EM KQT+QA++E+D ++FIVDGR GL QD++I ++LRK+G+ ++LV+NK
Sbjct: 61 EPVAKDGIMAEMAKQTRQAVVEADTVVFIVDGRLGLAPQDRVIADYLRKTGRQVMLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + SS++ DFYELG+G+P +ISA +G+G+ ++ + + + K ++
Sbjct: 121 AEGMKYSSVTADFYELGLGDPLVISAAHGDGVAELVDEAIDLAIQQKPELAEEPDDGTQG 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRD+I FE K Y LIDTAG
Sbjct: 181 I---KIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDAIYVPFERGGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDA+Q++S QD +IA FI ESGR+L+V
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDARQDVSEQDAHIAGFIVESGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK ++++KL FLSFA F+FISA++ I M+SI+ Y ++++ L
Sbjct: 298 VNKWDGLDGHTRDRIKADMERKLKFLSFANFHFISAVERTGIGPLMKSIDAAYAAAMVKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST R+TR ++ A++ P R + RPKLRYAHQGG NPPII+IHGN L I + YKRYLE
Sbjct: 358 STPRLTRVMMEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIIIIHGNALSAIPDTYKRYLE 417
>gi|416938396|ref|ZP_11934270.1| GTP-binding protein Der [Burkholderia sp. TJI49]
gi|325524779|gb|EGD02753.1| GTP-binding protein Der [Burkholderia sp. TJI49]
Length = 445
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/420 (57%), Positives = 318/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKTIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAD--QPEEEDENDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA +FISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDEHARERAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|161723167|ref|YP_442759.2| GTP-binding protein EngA [Burkholderia thailandensis E264]
gi|167581710|ref|ZP_02374584.1| GTP-binding protein EngA [Burkholderia thailandensis TXDOH]
gi|167619826|ref|ZP_02388457.1| GTP-binding protein EngA [Burkholderia thailandensis Bt4]
gi|257138969|ref|ZP_05587231.1| GTP-binding protein EngA [Burkholderia thailandensis E264]
Length = 445
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/420 (57%), Positives = 319/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAA 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K+Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKQYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA F+FISA + I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|254252261|ref|ZP_04945579.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
gi|124894870|gb|EAY68750.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
Length = 445
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 241/420 (57%), Positives = 318/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAD--QPEEEDDNDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGVKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA +FISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDEHARERAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|83652896|gb|ABC36959.1| GTPase family protein [Burkholderia thailandensis E264]
Length = 460
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/420 (57%), Positives = 319/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 16 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 75
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 76 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 135
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 136 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAA 191
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K+Y LIDTAG
Sbjct: 192 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKQYTLIDTAG 251
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V
Sbjct: 252 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVG 311
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA F+FISA + I + M S++ Y +++ L
Sbjct: 312 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 371
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 372 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 431
>gi|254248074|ref|ZP_04941395.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
gi|124872850|gb|EAY64566.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
Length = 445
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 243/420 (57%), Positives = 317/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++I+DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLIVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADEDDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R K ++ +KL FL FA +FISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|221198076|ref|ZP_03571122.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2M]
gi|221204366|ref|ZP_03577383.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2]
gi|221212773|ref|ZP_03585749.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD1]
gi|421470062|ref|ZP_15918471.1| ribosome-associated GTPase EngA [Burkholderia multivorans ATCC
BAA-247]
gi|421478068|ref|ZP_15925839.1| ribosome-associated GTPase EngA [Burkholderia multivorans CF2]
gi|221166986|gb|EED99456.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD1]
gi|221175223|gb|EEE07653.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2]
gi|221182008|gb|EEE14409.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2M]
gi|400225314|gb|EJO55489.1| ribosome-associated GTPase EngA [Burkholderia multivorans CF2]
gi|400228569|gb|EJO58494.1| ribosome-associated GTPase EngA [Burkholderia multivorans ATCC
BAA-247]
Length = 445
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/420 (57%), Positives = 318/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAD--QPEEEDDNDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA +FISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDEHARERAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|107029013|ref|YP_626108.1| GTP-binding protein EngA [Burkholderia cenocepacia AU 1054]
gi|116689829|ref|YP_835452.1| GTP-binding protein EngA [Burkholderia cenocepacia HI2424]
gi|170733168|ref|YP_001765115.1| GTP-binding protein EngA [Burkholderia cenocepacia MC0-3]
gi|123370031|sp|Q1BGX0.1|DER_BURCA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224312|sp|A0K7T2.1|DER_BURCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238688579|sp|B1JT88.1|DER_BURCC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|105898177|gb|ABF81135.1| Small GTP-binding protein domain protein [Burkholderia cenocepacia
AU 1054]
gi|116647918|gb|ABK08559.1| small GTP-binding protein [Burkholderia cenocepacia HI2424]
gi|169816410|gb|ACA90993.1| small GTP-binding protein [Burkholderia cenocepacia MC0-3]
Length = 445
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/420 (57%), Positives = 317/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADEDDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R K ++ +KL FL FA +FISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|444371762|ref|ZP_21171295.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia
K56-2Valvano]
gi|443594661|gb|ELT63296.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia
K56-2Valvano]
Length = 445
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/420 (57%), Positives = 317/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEAEEDDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R K ++ +KL FL FA +FISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMSKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|444357828|ref|ZP_21159312.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia BC7]
gi|443605518|gb|ELT73366.1| ribosome-associated GTPase EngA [Burkholderia cenocepacia BC7]
Length = 445
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/420 (57%), Positives = 317/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEAEEDDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R K ++ +KL FL FA +FISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDDHARDHAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMSKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|167836401|ref|ZP_02463284.1| GTP-binding protein EngA [Burkholderia thailandensis MSMB43]
Length = 445
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/420 (57%), Positives = 318/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAA 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K+Y LIDTAG
Sbjct: 177 ARGTKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKQYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA F+FISA + I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERTKADLARKLKFLDFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|206560243|ref|YP_002231007.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315]
gi|238693091|sp|B4EAW5.1|DER_BURCJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|198036284|emb|CAR52180.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315]
Length = 445
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/420 (57%), Positives = 316/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEAEEDDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + R K ++ +KL FL FA +FISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGFDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMSKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|78066578|ref|YP_369347.1| GTP-binding protein EngA [Burkholderia sp. 383]
gi|123728977|sp|Q39FR3.1|DER_BURS3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|77967323|gb|ABB08703.1| Small GTP-binding protein [Burkholderia sp. 383]
Length = 445
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/420 (57%), Positives = 317/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADEDDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R K ++ +KL FL FA ++ISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDEHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPP+IVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTETYKRYLE 416
>gi|172060768|ref|YP_001808420.1| GTP-binding protein EngA [Burkholderia ambifaria MC40-6]
gi|238689149|sp|B1YR40.1|DER_BURA4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|171993285|gb|ACB64204.1| small GTP-binding protein [Burkholderia ambifaria MC40-6]
Length = 445
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/420 (56%), Positives = 319/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+H+M +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHQMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADDDDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R K ++ +KL FL FA ++ISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPP+IVIHGN L + + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTDTYKRYLE 416
>gi|238027075|ref|YP_002911306.1| GTP-binding protein Der [Burkholderia glumae BGR1]
gi|237876269|gb|ACR28602.1| GTP-binding protein EngA [Burkholderia glumae BGR1]
Length = 448
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/420 (57%), Positives = 317/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGARPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVAADFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEDAAQ 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K Y LIDTAG
Sbjct: 177 SRGVKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA F+FISA + I + S++ Y +++ L
Sbjct: 297 VNKWDGLDSHARERTKADLTRKLKFLEFAKFHFISAAEKTGIGPLLRSVDDAYAAAMKKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTDTYKRYLE 416
>gi|413962510|ref|ZP_11401737.1| GTP-binding protein Der [Burkholderia sp. SJ98]
gi|413928342|gb|EKS67630.1| GTP-binding protein Der [Burkholderia sp. SJ98]
Length = 446
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/421 (57%), Positives = 323/421 (76%), Gaps = 6/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G ++ ++++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
FEP K GI+HEM +QT+QA+ E+DI++FIVDGR GL QDK I ++LRK+G+P+ LV+N
Sbjct: 61 FEPVAKDGILHEMARQTRQAVEEADIVVFIVDGRNGLAPQDKAIADYLRKTGRPLFLVVN 120
Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K+E + S+++ DFYELG+G+P ISA +G+G+ + + L I YK + +E +
Sbjct: 121 KAEGMKYSAVAADFYELGLGDPRAISAAHGDGVVEMINDALDIA--YKD--QPEESEDEK 176
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRDSI FE +KY LIDTA
Sbjct: 177 AKHGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDSIYVDFERQGRKYTLIDTA 236
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V
Sbjct: 237 GLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISEQDAHIAGFVVEQGRALVV 296
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + + R+ K+++ +KL FL FA F+++SA++ I + M+S++ Y +++
Sbjct: 297 GVNKWDGLDSHVRERTKSDLTRKLKFLDFAKFHYVSALEKTGIGALMKSVDDAYAAAMAK 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
L T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIV+HGN L I + YKRYL
Sbjct: 357 LPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVVHGNALDAITDTYKRYL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|53719151|ref|YP_108137.1| GTP-binding protein EngA [Burkholderia pseudomallei K96243]
gi|124383522|ref|YP_001026075.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10229]
gi|126439512|ref|YP_001059220.1| GTP-binding protein EngA [Burkholderia pseudomallei 668]
gi|126449445|ref|YP_001080656.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10247]
gi|126454834|ref|YP_001066487.1| GTP-binding protein EngA [Burkholderia pseudomallei 1106a]
gi|161579520|ref|YP_103001.2| GTP-binding protein EngA [Burkholderia mallei ATCC 23344]
gi|162210023|ref|YP_333745.2| GTP-binding protein EngA [Burkholderia pseudomallei 1710b]
gi|167719273|ref|ZP_02402509.1| GTP-binding protein EngA [Burkholderia pseudomallei DM98]
gi|167738270|ref|ZP_02411044.1| GTP-binding protein EngA [Burkholderia pseudomallei 14]
gi|167815459|ref|ZP_02447139.1| GTP-binding protein EngA [Burkholderia pseudomallei 91]
gi|167823871|ref|ZP_02455342.1| GTP-binding protein EngA [Burkholderia pseudomallei 9]
gi|167845410|ref|ZP_02470918.1| GTP-binding protein EngA [Burkholderia pseudomallei B7210]
gi|167902402|ref|ZP_02489607.1| GTP-binding protein EngA [Burkholderia pseudomallei NCTC 13177]
gi|167910644|ref|ZP_02497735.1| GTP-binding protein EngA [Burkholderia pseudomallei 112]
gi|167918673|ref|ZP_02505764.1| GTP-binding protein EngA [Burkholderia pseudomallei BCC215]
gi|254177966|ref|ZP_04884621.1| GTPase family protein [Burkholderia mallei ATCC 10399]
gi|254189054|ref|ZP_04895565.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237]
gi|254259698|ref|ZP_04950752.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a]
gi|254297432|ref|ZP_04964885.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e]
gi|254358306|ref|ZP_04974579.1| GTP-binding protein EngA [Burkholderia mallei 2002721280]
gi|81824774|sp|Q63US9.1|DER_BURPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224313|sp|A3MK70.1|DER_BURM7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224314|sp|A2S2A6.1|DER_BURM9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224315|sp|A3NVW6.1|DER_BURP0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224316|sp|A3NA49.1|DER_BURP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|52209565|emb|CAH35518.1| putative GTPase [Burkholderia pseudomallei K96243]
gi|124291542|gb|ABN00811.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10229]
gi|126219005|gb|ABN82511.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 668]
gi|126228476|gb|ABN92016.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106a]
gi|126242315|gb|ABO05408.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10247]
gi|148027433|gb|EDK85454.1| GTP-binding protein EngA [Burkholderia mallei 2002721280]
gi|157808014|gb|EDO85184.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e]
gi|157936733|gb|EDO92403.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237]
gi|160699005|gb|EDP88975.1| GTPase family protein [Burkholderia mallei ATCC 10399]
gi|254218387|gb|EET07771.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a]
Length = 445
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/420 (57%), Positives = 318/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVNDMINEAL--EVAYAG--EPQESEEAAA 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA F+FISA + I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|402566392|ref|YP_006615737.1| GTP-binding protein EngA [Burkholderia cepacia GG4]
gi|402247589|gb|AFQ48043.1| GTP-binding protein EngA [Burkholderia cepacia GG4]
Length = 445
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/420 (57%), Positives = 317/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADEDDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R K ++ +KL FL FA ++ISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPP+IVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTETYKRYLE 416
>gi|134295839|ref|YP_001119574.1| GTP-binding protein EngA [Burkholderia vietnamiensis G4]
gi|166224317|sp|A4JEN6.1|DER_BURVG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|134138996|gb|ABO54739.1| small GTP-binding protein [Burkholderia vietnamiensis G4]
Length = 445
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/420 (57%), Positives = 318/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADDNDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R K ++ +KL FL FA ++ISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPP+IVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTETYKRYLE 416
>gi|121598397|ref|YP_993149.1| GTP-binding protein EngA [Burkholderia mallei SAVP1]
gi|217421388|ref|ZP_03452892.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576]
gi|237812544|ref|YP_002896995.1| GTP-binding protein EngA [Burkholderia pseudomallei MSHR346]
gi|238563546|ref|ZP_00438709.2| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4]
gi|242314802|ref|ZP_04813818.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b]
gi|251767656|ref|ZP_02268028.2| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20]
gi|254197870|ref|ZP_04904292.1| GTP-binding protein EngA [Burkholderia pseudomallei S13]
gi|254199946|ref|ZP_04906312.1| GTP-binding protein EngA [Burkholderia mallei FMH]
gi|254206279|ref|ZP_04912631.1| GTP-binding protein EngA [Burkholderia mallei JHU]
gi|52426961|gb|AAU47554.1| GTPase family protein [Burkholderia mallei ATCC 23344]
gi|76581515|gb|ABA50990.1| GTPase family protein [Burkholderia pseudomallei 1710b]
gi|121227207|gb|ABM49725.1| GTPase family protein [Burkholderia mallei SAVP1]
gi|147749542|gb|EDK56616.1| GTP-binding protein EngA [Burkholderia mallei FMH]
gi|147753722|gb|EDK60787.1| GTP-binding protein EngA [Burkholderia mallei JHU]
gi|169654611|gb|EDS87304.1| GTP-binding protein EngA [Burkholderia pseudomallei S13]
gi|217395130|gb|EEC35148.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576]
gi|237503777|gb|ACQ96095.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei MSHR346]
gi|238520490|gb|EEP83949.1| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4]
gi|242138041|gb|EES24443.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b]
gi|243062055|gb|EES44241.1| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20]
Length = 460
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/420 (57%), Positives = 318/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 16 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 75
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 76 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 135
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 136 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVNDMINEAL--EVAYAG--EPQESEEAAA 191
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K Y LIDTAG
Sbjct: 192 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAG 251
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 252 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 311
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA F+FISA + I + M S++ Y +++ L
Sbjct: 312 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 371
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 372 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 431
>gi|161524640|ref|YP_001579652.1| GTP-binding protein EngA [Burkholderia multivorans ATCC 17616]
gi|189350604|ref|YP_001946232.1| GTP-binding protein EngA [Burkholderia multivorans ATCC 17616]
gi|238687037|sp|A9AH00.1|DER_BURM1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|160342069|gb|ABX15155.1| small GTP-binding protein [Burkholderia multivorans ATCC 17616]
gi|189334626|dbj|BAG43696.1| GTP-binding protein [Burkholderia multivorans ATCC 17616]
Length = 445
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/420 (57%), Positives = 317/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAD--QPEEEDDNDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRSGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA +FISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDEHARERAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|254179556|ref|ZP_04886155.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655]
gi|184210096|gb|EDU07139.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655]
Length = 445
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/420 (57%), Positives = 318/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISATHGDGVNDMINEAL--EVAYAG--EPQESEEAAA 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA F+FISA + I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|330817163|ref|YP_004360868.1| GTPase family protein [Burkholderia gladioli BSR3]
gi|327369556|gb|AEA60912.1| GTPase family protein [Burkholderia gladioli BSR3]
Length = 448
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 238/420 (56%), Positives = 316/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRAGARPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E + +
Sbjct: 121 AEGMKYTAVASDFYELGMGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADDTQA 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K Y LIDTAG
Sbjct: 177 SRGVKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R K ++ +KL FL FA F+FISA + I + S++ Y +++ L
Sbjct: 297 VNKWDGLDAHTRDRTKADLTRKLKFLEFAKFHFISAAEKTGIGPLLRSVDDAYAAAMKKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPP+IV+HGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPVIVVHGNALDAVTETYKRYLE 416
>gi|73541770|ref|YP_296290.1| GTP-binding protein EngA [Ralstonia eutropha JMP134]
gi|123732900|sp|Q46ZI7.1|DER_RALEJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|72119183|gb|AAZ61446.1| Small GTP-binding protein protein domain:GTP-binding protein
[Ralstonia eutropha JMP134]
Length = 447
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/420 (56%), Positives = 320/420 (76%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG + FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGDRPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP VK+GI+ EM KQT+QA++E+D++IFIVDGR GL QD+ I ++LRK+G+ ++L +NK
Sbjct: 61 EPVVKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRVMLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +S++ DFYELG+G+P+ ISA +G+G++ ++ L + + + ++ + S
Sbjct: 121 AEGMKYTSVAADFYELGMGDPYAISAAHGDGVRELVDEALELAVQERPELAEE---DADS 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE K Y LIDTAG
Sbjct: 178 GKGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA FI ESGR+L+V
Sbjct: 238 LRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFIVESGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK+++++KL FLSFA F+F+SA + I + M S++ Y ++++ L
Sbjct: 298 VNKWDGLDGHTRDRIKHDLERKLQFLSFANFHFVSARERTGIGALMRSVDDAYAAAMVKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L A++ P R + RPKLRYAHQGG NPPIIVIHGN L + Y+RYLE
Sbjct: 358 PTPQLTRVLQEAVEFQQPKRAGVSRPKLRYAHQGGSNPPIIVIHGNALSSVSETYRRYLE 417
>gi|323526574|ref|YP_004228727.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001]
gi|407714021|ref|YP_006834586.1| GTPase Der [Burkholderia phenoliruptrix BR3459a]
gi|323383576|gb|ADX55667.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001]
gi|407236205|gb|AFT86404.1| GTPase Der [Burkholderia phenoliruptrix BR3459a]
Length = 445
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/420 (57%), Positives = 314/420 (74%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ ESDI++FIVDGR GL QDK+I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKVIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S+++ DFYELG+G+P ISA +G+G+ + L + + +E +
Sbjct: 121 AEGMKYSAVAADFYELGLGDPRAISAAHGDGVTEMINEALGVAYAGQP----EESDEEKA 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI FE K Y LIDTAG
Sbjct: 177 AHGIKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERQGKPYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++++KL FL FA F+FISA + I M S++ Y +++ L
Sbjct: 297 VNKWDGLDSHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYAAAMSKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L I YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416
>gi|115351797|ref|YP_773636.1| GTP-binding protein EngA [Burkholderia ambifaria AMMD]
gi|170702835|ref|ZP_02893684.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10]
gi|171321331|ref|ZP_02910290.1| small GTP-binding protein [Burkholderia ambifaria MEX-5]
gi|122323095|sp|Q0BEX1.1|DER_BURCM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|115281785|gb|ABI87302.1| small GTP-binding protein [Burkholderia ambifaria AMMD]
gi|170132253|gb|EDT00732.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10]
gi|171093388|gb|EDT38576.1| small GTP-binding protein [Burkholderia ambifaria MEX-5]
Length = 445
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/420 (56%), Positives = 317/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+H+M +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHQMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADEDDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG
Sbjct: 177 SRGIKIAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R K ++ +KL FL FA ++ISA K I + M S++ Y +++ L
Sbjct: 297 VNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPP+IVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTETYKRYLE 416
>gi|415943453|ref|ZP_11556062.1| GTP-binding protein [Herbaspirillum frisingense GSF30]
gi|407758693|gb|EKF68483.1| GTP-binding protein [Herbaspirillum frisingense GSF30]
Length = 430
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/404 (59%), Positives = 316/404 (78%), Gaps = 6/404 (1%)
Query: 18 LFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEMTKQTK 77
+FNRLT SRDALVA+ PGLTRDRHYGEG +G++ F++IDTGGFEP K GIM+EM KQTK
Sbjct: 1 MFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFLVIDTGGFEPVAKDGIMYEMAKQTK 60
Query: 78 QAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLDFYELG 136
QA++E+D+++FIVDGRQGL DK IT+FLRK G+ ++LV+NKSE + +S++ DFYELG
Sbjct: 61 QAVVEADVVVFIVDGRQGLTPHDKTITDFLRKCGRSVMLVVNKSEGMKYTSVTADFYELG 120
Query: 137 IGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGK 195
+G+P++ISA +G+G+ + +E L IE + + +E ++ K+AIVG+PNVGK
Sbjct: 121 MGDPYVISAAHGDGVADLVEEALDQIEAQRAQEPEPEE----AAVRGTKIAIVGRPNVGK 176
Query: 196 STLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSV 255
STL+N+LLGE RVI +D PGTTRDSI+ FE + Y LIDTAGIRRR K FE IEKFSV
Sbjct: 177 STLVNTLLGEERVIAFDMPGTTRDSIEIPFEREGRHYTLIDTAGIRRRGKVFEAIEKFSV 236
Query: 256 IKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIK 315
+KTLKSI +ANVV+LLLDAQQ+IS QD +IA F+ ESGR+L+V VNKWD + +QR IK
Sbjct: 237 VKTLKSISDANVVLLLLDAQQDISEQDAHIAGFVLESGRALVVGVNKWDGMQSDQRDQIK 296
Query: 316 NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNH 375
++++KLNFLSFA F+FISA+K I M+SI+ Y +++ LST R+TRAL A+++
Sbjct: 297 MDLERKLNFLSFAKFHFISALKSTGIGPLMKSIDSAYAAAMAKLSTPRLTRALEEALEHQ 356
Query: 376 PPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
P RK IRPKLRYAHQGG+NPP++VIHGN L+ I ++YKRYLE
Sbjct: 357 QPRRKGSIRPKLRYAHQGGQNPPVVVIHGNALEAIDDNYKRYLE 400
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 36/177 (20%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRD----------RHYGEGYIGKKSFII 54
+ +VGRPNVGKSTL N L + + PG TRD RHY +
Sbjct: 166 IAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDSIEIPFEREGRHY----------TL 215
Query: 55 IDTGGFEPEVKKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK 109
IDT G ++G + E + +T ++I ++++++ ++D +Q + EQD I F+ +
Sbjct: 216 IDTAGIR---RRGKVFEAIEKFSVVKTLKSISDANVVLLLLDAQQDISEQDAHIAGFVLE 272
Query: 110 SGQPIVLVINKSENINS----SISLDFYE----LGIGNPHIISALYGNGIKNFLENI 158
SG+ +V+ +NK + + S I +D L H ISAL GI +++I
Sbjct: 273 SGRALVVGVNKWDGMQSDQRDQIKMDLERKLNFLSFAKFHFISALKSTGIGPLMKSI 329
>gi|377820986|ref|YP_004977357.1| small GTP-binding protein [Burkholderia sp. YI23]
gi|357935821|gb|AET89380.1| small GTP-binding protein [Burkholderia sp. YI23]
Length = 446
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/421 (57%), Positives = 321/421 (76%), Gaps = 6/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G ++ ++++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
FEP K GI+HEM +QT+QA+ E+DI++FIVDGR GL QDK I ++LRK+G+P+ LV+N
Sbjct: 61 FEPIAKDGILHEMARQTRQAVEEADIVVFIVDGRNGLAPQDKAIADYLRKTGRPLFLVVN 120
Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K+E + S+++ DFYELG+G+P ISA +G+G+ + + L I YK + +E
Sbjct: 121 KAEGMKYSAVAADFYELGLGDPRAISAAHGDGVVEMINDALDIA--YKD--QPEETEEEK 176
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRDSI FE +KY LIDTA
Sbjct: 177 AKHGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDSIYVDFERQGRKYTLIDTA 236
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V
Sbjct: 237 GLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFVVEQGRALVV 296
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + + R+ K ++ +KL FL FA F+++SA++ I + M+S++ Y +++
Sbjct: 297 GVNKWDGLDSHVRERTKADLSRKLKFLDFAKFHYVSALEKTGIGALMKSVDDAYAAAMAK 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
L T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIV+HGN L I + YKRYL
Sbjct: 357 LPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVVHGNALDAITDTYKRYL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|307729253|ref|YP_003906477.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003]
gi|307583788|gb|ADN57186.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003]
Length = 445
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/420 (57%), Positives = 313/420 (74%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ ESDI++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S+++ DFYELG+G+P ISA +G+G+ + L + + +E +
Sbjct: 121 AEGMKYSAVAADFYELGLGDPRAISAAHGDGVTEMINEALGVAYA----GQPEESDDDKE 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI FE K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERQGKPYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++++KL FL FA F+FISA + I M S++ Y +++ L
Sbjct: 297 VNKWDGLDSHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYTAAMSKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L I YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416
>gi|385209022|ref|ZP_10035890.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1]
gi|385181360|gb|EIF30636.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1]
Length = 445
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/420 (58%), Positives = 315/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ ESDI++FIVDGR GL QDK I ++LRK G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S+++ DFYELG+G+P ISA +G+G+ + L E+ Y + +E + +
Sbjct: 121 AEGMKYSTVAADFYELGLGDPRAISAAHGDGVTEMINEAL--EVAYAG--QPEENDDEKA 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI FE K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERGGKPYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++++KL FL FA F+FISA + I M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L I YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416
>gi|91784203|ref|YP_559409.1| GTP-binding protein EngA [Burkholderia xenovorans LB400]
gi|123168328|sp|Q13X32.1|DER_BURXL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|91688157|gb|ABE31357.1| Small GTP-binding protein [Burkholderia xenovorans LB400]
Length = 445
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/420 (58%), Positives = 315/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ ESDI++FIVDGR GL QDK I ++LRK G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S+++ DFYELG+G+P ISA +G+G+ + L E+ Y + +E + +
Sbjct: 121 AEGMKYSTVAADFYELGLGDPRAISAAHGDGVTEMINEAL--EVAYAG--QPEENDDEKA 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI FE K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERGGKPYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++++KL FL FA F+FISA + I M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L I YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416
>gi|194290002|ref|YP_002005909.1| gtp-binding protein enga [Cupriavidus taiwanensis LMG 19424]
gi|238692737|sp|B3R1J8.1|DER_CUPTR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|193223837|emb|CAQ69846.1| Ribosome-Associated GTP-binding protein protein [Cupriavidus
taiwanensis LMG 19424]
Length = 447
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/422 (58%), Positives = 320/422 (75%), Gaps = 8/422 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG++ FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP VK+GI+ EM KQTKQA++E+D++IFIVDGR GL QD+ I ++LRK+G+ I+L +NK
Sbjct: 61 EPVVKEGIVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRIMLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +S++ DFYELG+G+P+ ISA +G+G++ ++ IEL ++ + E S
Sbjct: 121 AEGMKYTSVAADFYELGMGDPYAISAAHGDGVRELVDE--AIELAVQE---RPELAEEAS 175
Query: 180 IEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
E +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE K Y LIDT
Sbjct: 176 DEGKGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDT 235
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA FI ESGR+L+
Sbjct: 236 AGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFIVESGRALV 295
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V VNKWD + + R IK+++++KL FLSFA F+F+SA + I + M S++ Y ++++
Sbjct: 296 VGVNKWDGLDGHTRDRIKHDLERKLQFLSFANFHFVSARERTGIGALMRSVDDAYAAAMV 355
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L T ++TR L A++ P R RPKLRYAHQGG NPPIIVIHGN L + Y+RY
Sbjct: 356 KLPTPQLTRVLQEAVEFQQPKRVGASRPKLRYAHQGGSNPPIIVIHGNALSGVAETYRRY 415
Query: 418 LE 419
LE
Sbjct: 416 LE 417
>gi|295676899|ref|YP_003605423.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002]
gi|295436742|gb|ADG15912.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002]
Length = 445
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/420 (57%), Positives = 316/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ ESD+++FIVDGR GL QDK I ++LRK G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEESDVVVFIVDGRNGLAPQDKSIADYLRKVGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E
Sbjct: 121 AEGMKYTNVAADFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDKE 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI FE N K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++++KL FL FA F+FISA + I M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYTAAMSKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L I + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITDTYKRYLE 416
>gi|170694783|ref|ZP_02885934.1| small GTP-binding protein [Burkholderia graminis C4D1M]
gi|170140414|gb|EDT08591.1| small GTP-binding protein [Burkholderia graminis C4D1M]
Length = 445
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/420 (57%), Positives = 312/420 (74%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRTGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ ESDI++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S+++ DFYELG+G+P ISA +G+G+ + L + + +E
Sbjct: 121 AEGMKYSTVAADFYELGLGDPRAISAAHGDGVTEMINEALGVAYA----GQPEESDEDKE 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI FE K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERQGKPYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++++KL FL FA F+FISA + I M S++ Y +++ L
Sbjct: 297 VNKWDGLDSHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYAAAMSKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L I YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416
>gi|350544506|ref|ZP_08914103.1| GTP-binding protein EngA [Candidatus Burkholderia kirkii UZHbot1]
gi|350527722|emb|CCD37535.1| GTP-binding protein EngA [Candidatus Burkholderia kirkii UZHbot1]
Length = 463
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/422 (56%), Positives = 322/422 (76%), Gaps = 8/422 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G ++ ++++DTGG
Sbjct: 18 MKPVIALVGRPNVGKSTLFNRLTRSRDALVAHLPGLTRDRHYGEGRMGGERPYLVVDTGG 77
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
FEP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+P+ LV+N
Sbjct: 78 FEPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPLFLVVN 137
Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K+E + ++++ DFYELG+G+P ISA +G+G+ + + L I + + E T
Sbjct: 138 KAEGMKYTAVASDFYELGLGDPRAISAAHGDGVVEMINDALDI-----AYADQPEETEEE 192
Query: 179 SIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
++ IK+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRDSI FE +KY LIDT
Sbjct: 193 KAQHGIKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDSIYVDFERQGRKYTLIDT 252
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+
Sbjct: 253 AGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISEQDAHIAGFVVEQGRALV 312
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V VNKWD + + R+ K ++ +KL FL FA F+++SA++ I + M+S++ Y ++++
Sbjct: 313 VGVNKWDGLDSHVRERTKADLTRKLKFLDFAKFHYVSALEKTGIGALMKSVDEAYAAAMV 372
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIV+HGN L + + YKRY
Sbjct: 373 KLPTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVVHGNALDAVTDTYKRY 432
Query: 418 LE 419
LE
Sbjct: 433 LE 434
>gi|167587055|ref|ZP_02379443.1| GTP-binding protein EngA [Burkholderia ubonensis Bu]
Length = 445
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/420 (56%), Positives = 315/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE + ++++ DFYELG+G+P ISA +G+G+ + L + + +E +
Sbjct: 121 SEGMKYTAVASDFYELGLGDPRAISAAHGDGVTEMINEALGVAYA----GQPEEEDEDKA 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K Y LIDTAG
Sbjct: 177 SRGTKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA F+FISA + I M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERTKADLTRKLKFLEFAKFHFISAAEKTGIGPLMRSVDDAYGAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPP+IVIHGN L + + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPVIVIHGNALDAVTDTYKRYLE 416
>gi|390568827|ref|ZP_10249119.1| GTP-binding protein Der [Burkholderia terrae BS001]
gi|420254110|ref|ZP_14757131.1| ribosome-associated GTPase EngA [Burkholderia sp. BT03]
gi|389939176|gb|EIN01013.1| GTP-binding protein Der [Burkholderia terrae BS001]
gi|398050089|gb|EJL42477.1| ribosome-associated GTPase EngA [Burkholderia sp. BT03]
Length = 446
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/422 (56%), Positives = 320/422 (75%), Gaps = 8/422 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G ++ ++++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
FEP K GI+HEM +QT+QA+ ESDI++FIVDGR GL QDK I ++LRK+G+PI LV+N
Sbjct: 61 FEPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVN 120
Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
KSE + +S++ DFYELG+G+P +SA +G+G+ + L + + + E ++
Sbjct: 121 KSEGMKYTSVAADFYELGLGDPRAVSAAHGDGVTEMINEALDV-----AYAGQPEESDEE 175
Query: 179 SIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
++ +K+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE KKY LIDT
Sbjct: 176 KAQHGVKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERQGKKYTLIDT 235
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+R K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+
Sbjct: 236 AGLRKRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALV 295
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V VNKWD + + R+ K ++++KL FL FA F+FISA + I M S++ Y +++
Sbjct: 296 VGVNKWDGLDPHVRERTKADLQRKLKFLEFAKFHFISAAEKTGIGPLMRSVDDAYKAAMT 355
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + + YKRY
Sbjct: 356 KLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTDTYKRY 415
Query: 418 LE 419
LE
Sbjct: 416 LE 417
>gi|167569736|ref|ZP_02362610.1| GTP-binding protein EngA [Burkholderia oklahomensis C6786]
Length = 445
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/420 (57%), Positives = 317/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAA 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K+Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKRYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA +FISA + I M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERAKADLARKLKFLDFAKSHFISAAEKTGIGPLMRSVDDAYAAAMKKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|94311040|ref|YP_584250.1| GTP-binding protein Der [Cupriavidus metallidurans CH34]
gi|123383733|sp|Q1LLJ5.1|DER_RALME RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|93354892|gb|ABF08981.1| GTP-binding protein [Cupriavidus metallidurans CH34]
Length = 447
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 235/420 (55%), Positives = 320/420 (76%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG + FI+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGDRPFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IF+VDGR GL QD++I ++LRK+G+ ++L INK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFLVDGRLGLAPQDRVIADYLRKTGRRVMLAINK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +S++ DFYELG+G+P+ IS+ +G+G++ ++ L + + + +E H
Sbjct: 121 AEGMKYTSVAADFYELGMGDPYAISSTHGDGVRELVDEALDLAVQERPELADQEDAGQHG 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE K Y LIDTAG
Sbjct: 181 V---KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+V
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISEQDAHIAGFIVESGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +QR +K+++++KL FLSFA +F+SA + I + + S++ Y +++I L
Sbjct: 298 VNKWDGLDGHQRDRVKHDLERKLQFLSFANIHFVSARERTGIGALLRSVDDAYAAAMIKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T +ITR L A++ P R + RPKLRYAHQGG NPPIIV+HGN L + + Y+RYLE
Sbjct: 358 PTPQITRVLQEAVEFQQPKRVGVSRPKLRYAHQGGSNPPIIVVHGNALSGVTDAYRRYLE 417
>gi|167562554|ref|ZP_02355470.1| GTP-binding protein EngA [Burkholderia oklahomensis EO147]
Length = 445
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/420 (57%), Positives = 317/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGVRPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E +
Sbjct: 121 AEGMKYTAVASDFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAA 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K+Y LIDTAG
Sbjct: 177 ARGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKRYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA +FISA + I M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERAKADLARKLKFLDFAKSHFISAAEKTGIGPLMRSVDDAYAAAMKKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 416
>gi|430806176|ref|ZP_19433291.1| GTP-binding protein Der [Cupriavidus sp. HMR-1]
gi|429501556|gb|EKZ99887.1| GTP-binding protein Der [Cupriavidus sp. HMR-1]
Length = 447
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 235/420 (55%), Positives = 319/420 (75%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG + FI+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGDRPFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IF+VDGR GL QD++I ++LRK+G+ ++L INK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFLVDGRLGLAPQDRVIADYLRKTGRRVMLAINK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +S++ DFYELG+G+P+ IS+ +G+G+ ++ L + + + +E H
Sbjct: 121 AEGMKYTSVAADFYELGMGDPYAISSTHGDGVHELVDEALDLAVQERPELADQEDAGQHG 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE K Y LIDTAG
Sbjct: 181 V---KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+V
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISEQDAHIAGFIVESGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +QR +K+++++KL FLSFA +F+SA + I + + S++ Y +++I L
Sbjct: 298 VNKWDGLDGHQRDRVKHDLERKLQFLSFANLHFVSARERTGIGALLRSVDDAYAAAMIKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T +ITR L A++ P R + RPKLRYAHQGG NPPIIV+HGN L + + Y+RYLE
Sbjct: 358 PTPQITRVLQEAVEFQQPKRVGVSRPKLRYAHQGGSNPPIIVVHGNALSGVTDAYRRYLE 417
>gi|187924514|ref|YP_001896156.1| GTP-binding protein EngA [Burkholderia phytofirmans PsJN]
gi|238689579|sp|B2SXS6.1|DER_BURPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|187715708|gb|ACD16932.1| small GTP-binding protein [Burkholderia phytofirmans PsJN]
Length = 445
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/420 (57%), Positives = 312/420 (74%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYGEG G + ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRTRDALVADLPGLTRDRHYGEGRAGDRPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ ESDI++FIVDGR GL QDK I ++LRK G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S+++ DFYELG+G+P ISA +G+G+ + L E+ Y + +E
Sbjct: 121 AEGMKYSNVAADFYELGLGDPRAISAAHGDGVTEMINEAL--EVAYAG--QPEESDEEKQ 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI FE K Y LIDTAG
Sbjct: 177 TRGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERGGKPYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++++KL FL FA F+FISA + I M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYAAAMAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L I YKRYLE
Sbjct: 357 PTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITETYKRYLE 416
>gi|209521123|ref|ZP_03269851.1| small GTP-binding protein [Burkholderia sp. H160]
gi|209498433|gb|EDZ98560.1| small GTP-binding protein [Burkholderia sp. H160]
Length = 445
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/420 (57%), Positives = 316/420 (75%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRAGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ ESD+++FIVDGR GL QDK I ++LRK G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEESDVVVFIVDGRNGLAPQDKSIADYLRKVGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L E+ Y + +E
Sbjct: 121 AEGMKYANVAADFYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDEE 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRDSI FE N K Y LIDTAG
Sbjct: 177 ARGVKIAIVGRPNVGKSTLINALVGEERVIAFDMPGTTRDSIYVDFERNGKPYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V
Sbjct: 237 LRRRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVG 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++++KL FL FA F+FISA + I M S++ Y +++ L
Sbjct: 297 VNKWDGLDPHVRERTKADLERKLKFLDFAKFHFISAAEKTGIGPLMRSVDDAYTAAMSKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L I + YKRYLE
Sbjct: 357 PTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITDTYKRYLE 416
>gi|339326391|ref|YP_004686084.1| GTPase Der [Cupriavidus necator N-1]
gi|338166548|gb|AEI77603.1| GTPase Der [Cupriavidus necator N-1]
Length = 456
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/422 (57%), Positives = 319/422 (75%), Gaps = 8/422 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG++ FI IDTGGF
Sbjct: 10 MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP VK+GI+ EM KQTKQA++E+D++IFIVDGR GL QD+ I ++LRK+G+ I+L +NK
Sbjct: 70 EPVVKEGIVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRIMLAVNK 129
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +S++ DFYELG+G+P+ ISA +G+G+ ++ IEL ++ + E S
Sbjct: 130 AEGMKYTSVAADFYELGMGDPYAISAAHGDGVSELVDE--AIELAVQE---RPELAEEIS 184
Query: 180 IEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
E +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE K Y LIDT
Sbjct: 185 DEGKGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDT 244
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA FI ESGR+L+
Sbjct: 245 AGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISEQDAHIAGFIVESGRALV 304
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V VNKWD + + R IK+++++KL FLSFA F+F+SA + I + M S++ + ++++
Sbjct: 305 VGVNKWDGLDGHTRDRIKHDLERKLQFLSFANFHFVSARERTGIGALMRSVDDAFAAAMV 364
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L T ++TR L A++ P R RPKLRYAHQGG NPPIIVIHGN L + Y+RY
Sbjct: 365 KLPTPQLTRVLQEAVEFQQPKRVGASRPKLRYAHQGGSNPPIIVIHGNALSGVAETYRRY 424
Query: 418 LE 419
LE
Sbjct: 425 LE 426
>gi|113868334|ref|YP_726823.1| GTP-binding protein EngA [Ralstonia eutropha H16]
gi|113527110|emb|CAJ93455.1| GTP-binding protein [Ralstonia eutropha H16]
Length = 456
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/420 (57%), Positives = 318/420 (75%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG++ FI IDTGGF
Sbjct: 10 MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP VK+GI+ EM KQTKQA++E+D++IFIVDGR GL QD+ I ++LRK+G+ I+L +NK
Sbjct: 70 EPVVKEGIVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRIMLAVNK 129
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +S++ DFYELG+G+P+ ISA +G+G+ ++ IEL ++ + E
Sbjct: 130 AEGMKYTSVAADFYELGMGDPYAISAAHGDGVSELVDE--AIELAVQERPELGEEIPDEG 187
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE K Y LIDTAG
Sbjct: 188 -KGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 246
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA FI ESGR+L+V
Sbjct: 247 LRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFIVESGRALVVG 306
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK+++++KL FLSFA F+F+SA + I + M S++ + ++++ L
Sbjct: 307 VNKWDGLDGHTRDRIKHDLERKLQFLSFANFHFVSARERTGIGALMRSVDDAFAAAMVKL 366
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L A++ P R RPKLRYAHQGG NPPIIVIHGN L + Y+RYLE
Sbjct: 367 PTPQLTRVLQEAVEFQQPKRVGASRPKLRYAHQGGSNPPIIVIHGNALSGVAETYRRYLE 426
>gi|186476174|ref|YP_001857644.1| GTP-binding protein EngA [Burkholderia phymatum STM815]
gi|238691310|sp|B2JIU7.1|DER_BURP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|184192633|gb|ACC70598.1| small GTP-binding protein [Burkholderia phymatum STM815]
Length = 446
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/422 (56%), Positives = 320/422 (75%), Gaps = 8/422 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G ++ ++++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
FEP K GI+ EM +QT+QA+ ESD+I+FIVDGR GL QDK I ++LRK+G+PI LV+N
Sbjct: 61 FEPVAKDGILFEMARQTRQAVEESDVIVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVN 120
Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K+E + ++++ DFYELG+G+P ISA +G+G+ + L + + + E ++
Sbjct: 121 KAEGMKYTNVAADFYELGLGDPRAISAAHGDGVTEMINEALDV-----AYAGQPEESDEE 175
Query: 179 SIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
++ IK+AIVG+PNVGKSTL+N+L+GE+RVI +D PGTTRDSI FE KKY LIDT
Sbjct: 176 KAQHGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERQGKKYTLIDT 235
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+R K FE IEKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+
Sbjct: 236 AGLRKRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALV 295
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V VNKWD + + R+ K+++++KL FL FA F+FISA + I M S++ Y +++
Sbjct: 296 VGVNKWDGLDPHVRERTKSDLQRKLKFLEFAKFHFISAAEKTGIGPLMRSVDDAYKAAMS 355
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + + YKRY
Sbjct: 356 KLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTDTYKRY 415
Query: 418 LE 419
LE
Sbjct: 416 LE 417
>gi|241662759|ref|YP_002981119.1| GTP-binding protein EngA [Ralstonia pickettii 12D]
gi|404378009|ref|ZP_10983109.1| GTPase Der [Ralstonia sp. 5_2_56FAA]
gi|240864786|gb|ACS62447.1| small GTP-binding protein [Ralstonia pickettii 12D]
gi|348615940|gb|EGY65448.1| GTPase Der [Ralstonia sp. 5_2_56FAA]
Length = 447
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 235/420 (55%), Positives = 319/420 (75%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IFIVDGR GL QD++I ++LRK+G+ I+L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L +L + + + E + H
Sbjct: 121 AEGMRYTAVASDFYELGLGDPAAISAAHGDGVNDLVAEAL--DLAFAERPELAEAADAHD 178
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE N K Y LIDTAG
Sbjct: 179 -HGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+L+LDAQQ+IS QD +IA FI ESGR+L++
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK+++++KL FLSFA ++ISA + I + M+S++ Y ++++ L
Sbjct: 298 VNKWDGLTGHARDRIKHDMERKLQFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L+ A++ P R + RPKLRYAHQGG NPPI+VIHGN L I Y+RYLE
Sbjct: 358 PTPKLTRVLMEAVEYQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRYLE 417
>gi|312796097|ref|YP_004029019.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454]
gi|312167872|emb|CBW74875.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454]
Length = 444
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 232/420 (55%), Positives = 314/420 (74%), Gaps = 6/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT+QA+ E+D+++F+VDGR GL QDK I ++LRK+G+PI LV+NK
Sbjct: 61 EPVAKDGILHEMARQTRQAVEEADVVVFVVDGRNGLAPQDKTIADYLRKTGRPIFLVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S+++ DFYELG+G+P ISA +G+G+ + L + + + H+
Sbjct: 121 AEGMKYSAVAADFYELGLGDPRAISAAHGDGVSEMIGQALAV-----AYADRAPHDEAHA 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI FE + Y LIDTAG
Sbjct: 176 GHGVKIAIVGRPNVGKSTLVNALLGEERVIAFDLPGTTRDSIYIDFERQGRPYTLIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE +EKFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L++
Sbjct: 236 LRKRGKVFEAVEKFSVVKTLQSIADANVVILLLDARQDISEQDAHIAGFVVEQGRALVIG 295
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ K ++ +KL FL FA ++ISA + I + + S++ Y +++ L
Sbjct: 296 VNKWDGLDEHVRERTKADLARKLKFLDFAKSHYISAAEKTGIGALLRSVDAAYAAAMAKL 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRALI A++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L I + YKRYLE
Sbjct: 356 PTPKLTRALIDAVQFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAITDTYKRYLE 415
>gi|187928156|ref|YP_001898643.1| GTP-binding protein EngA [Ralstonia pickettii 12J]
gi|238691801|sp|B2U9V3.1|DER_RALPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|187725046|gb|ACD26211.1| small GTP-binding protein [Ralstonia pickettii 12J]
Length = 447
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/420 (55%), Positives = 319/420 (75%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGDRPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IFIVDGR GL QD++I ++LRK+G+ I+L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P ISA +G+G+ + + L +L + + + E + H
Sbjct: 121 AEGMRYTAVASDFYELGLGDPAAISAAHGDGVNDLVAEAL--DLAFAERPELAEAADAHD 178
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE N K Y LIDTAG
Sbjct: 179 -HGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+L+LDAQQ+IS QD +IA FI ESGR+L++
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK+++++KL FLSFA ++ISA + I + M+S++ Y ++++ L
Sbjct: 298 VNKWDGLTGHARDRIKHDMERKLQFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L+ A++ P R + RPKLRYAHQGG NPPI+VIHGN L I Y+R+LE
Sbjct: 358 PTPKLTRVLMEAVEYQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417
>gi|344171684|emb|CCA84304.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
syzygii R24]
Length = 447
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/420 (55%), Positives = 319/420 (75%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IFIVDGR GL QD++I ++LRK+G+ I+L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P IS+ +G+G+++ ++ L + + + + H
Sbjct: 121 AEGMKYTTVATDFYELGLGDPRAISSAHGDGVRDLVDEALDLAFAERPELAEAAEGHDHG 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE N K Y LIDTAG
Sbjct: 181 T---RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L++
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK+++++KL FLSFA ++ISA + + I + M+S++ Y ++++ L
Sbjct: 298 VNKWDGLDGHARDRIKHDLERKLQFLSFANVHYISAKQRSGIGALMKSVDDAYAAAMVKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L A++ P R + RPKLRYAHQGG NPPI+VIHGN L I Y+R+LE
Sbjct: 358 PTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417
>gi|299067270|emb|CBJ38467.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum CMR15]
Length = 447
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/420 (55%), Positives = 317/420 (75%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IFIVDGR GL QD++I ++LRK+G+ I+L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P IS+ +G+G++ ++ L + + + + H
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRELVDEALDLAFAERPELAEAAEGHDHG 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE N K Y LIDTAG
Sbjct: 181 T---RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L++
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK+++++KL FLSFA ++ISA + I + M+S++ Y ++++ L
Sbjct: 298 VNKWDGLDGHARDRIKHDMERKLQFLSFANVHYISAKQRTGIGALMKSVDDAYAAAMVKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L A++ P R + RPKLRYAHQGG NPPI+VIHGN L I Y+R+LE
Sbjct: 358 PTPKLTRVLQDAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417
>gi|421888527|ref|ZP_16319618.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum K60-1]
gi|378966147|emb|CCF96366.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum K60-1]
Length = 447
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 233/422 (55%), Positives = 319/422 (75%), Gaps = 8/422 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IFIVDGR GL QD++I ++LRK+G+ I+L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P IS+ +G+G+++ ++ L + F ++ E +
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEALD-----QAFSERPELADAAQ 175
Query: 180 IE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE N K Y LIDT
Sbjct: 176 AHDHGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDT 235
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+
Sbjct: 236 AGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALV 295
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ VNKWD + + R IK+++++KL FLSFA ++ISA + I + M+S++ Y ++++
Sbjct: 296 IGVNKWDGLDGHARDRIKHDLERKLQFLSFANVHYISAKQRTGIGALMKSVDDAYAAAMV 355
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L T ++TR L A++ P R + RPKLRYAHQGG NPPI+VIHGN L I Y+R+
Sbjct: 356 KLPTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRF 415
Query: 418 LE 419
LE
Sbjct: 416 LE 417
>gi|17545938|ref|NP_519340.1| GTP-binding protein EngA [Ralstonia solanacearum GMI1000]
gi|26006721|sp|Q8Y026.1|DER_RALSO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|17428233|emb|CAD14921.1| putative gtp-binding protein [Ralstonia solanacearum GMI1000]
Length = 447
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/420 (55%), Positives = 317/420 (75%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IFIVDGR GL QD++I ++LRK+G+ I+L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P IS+ +G+G++ ++ L + + + + H
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRELVDEALDLAFAERPELAEAAEGHDHG 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE N K Y LIDTAG
Sbjct: 181 T---RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L++
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK+++++KL FLSFA ++ISA + I + M+S++ Y ++++ L
Sbjct: 298 VNKWDGLDGHARDRIKHDMERKLQFLSFANVHYISAKQRTGIGALMKSVDDAYAAAMVKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L A++ P R + RPKLRYAHQGG NPPI+VIHGN L I Y+R+LE
Sbjct: 358 PTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417
>gi|83747951|ref|ZP_00944982.1| GTP-binding protein [Ralstonia solanacearum UW551]
gi|421897156|ref|ZP_16327524.1| gtp-binding protein [Ralstonia solanacearum MolK2]
gi|83725369|gb|EAP72516.1| GTP-binding protein [Ralstonia solanacearum UW551]
gi|206588362|emb|CAQ35325.1| gtp-binding protein [Ralstonia solanacearum MolK2]
Length = 447
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 231/420 (55%), Positives = 317/420 (75%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IFIVDGR GL QD++I ++LRK+G+ I+L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P IS+ +G+G+++ ++ L + + + H
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEALDQAFSERPELAEAAQAHDHG 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE N K Y LIDTAG
Sbjct: 181 T---RIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L++
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK+++++KL FL+FA ++ISA + I + M+S++ Y ++++ L
Sbjct: 298 VNKWDGLDGHARDRIKHDLERKLQFLAFANVHYISAKQRTGIGALMKSVDDAYAAAMVKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L A++ P R + RPKLRYAHQGG NPPI+VIHGN L I Y+R+LE
Sbjct: 358 PTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417
>gi|300691802|ref|YP_003752797.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum PSI07]
gi|299078862|emb|CBJ51523.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum PSI07]
gi|344166991|emb|CCA79182.1| GTPase involved in ribosome synthesis and maintenance [blood
disease bacterium R229]
Length = 447
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/420 (55%), Positives = 321/420 (76%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADIPGLTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IFIVDGR GL QD++I ++LRK+G+ I+L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P IS+ +G+G+++ ++ L +L + + + E H
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEAL--DLAFAERPELAEAAEDHG 178
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE N K Y LIDTAG
Sbjct: 179 YG-TRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L++
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK+++++KL FLSFA ++ISA + + I + M+S++ Y ++++ L
Sbjct: 298 VNKWDGLDGHARDRIKHDLERKLQFLSFANVHYISAKQRSGIGALMKSVDDAYAAAMVKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L A++ P R + RPKLRYAHQGG NPPI+VIHGN L I Y+R+LE
Sbjct: 358 PTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 417
>gi|386333812|ref|YP_006029983.1| GTPase [Ralstonia solanacearum Po82]
gi|334196262|gb|AEG69447.1| GTPase [Ralstonia solanacearum Po82]
Length = 447
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/422 (54%), Positives = 319/422 (75%), Gaps = 8/422 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IFIVDGR GL QD++I ++LRK+G+ I+L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P IS+ +G+G+++ ++ L + F ++ E +
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEALD-----QAFSERPELADAAQ 175
Query: 180 IE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE N K Y LIDT
Sbjct: 176 AHDHGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDT 235
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+
Sbjct: 236 AGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALV 295
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ VNKWD + + R IK+++++KL FL+FA ++ISA + I + M+S++ Y ++++
Sbjct: 296 IGVNKWDGLDGHARDRIKHDLERKLQFLAFANVHYISAKQRTGIGALMKSVDDAYAAAMV 355
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L T ++TR L A++ P R + RPKLRYAHQGG NPPI+VIHGN L I Y+R+
Sbjct: 356 KLPTPKLTRVLQEAVEFQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRF 415
Query: 418 LE 419
LE
Sbjct: 416 LE 417
>gi|300704410|ref|YP_003746013.1| GTPase [Ralstonia solanacearum CFBP2957]
gi|299072074|emb|CBJ43406.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia
solanacearum CFBP2957]
Length = 447
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/422 (54%), Positives = 319/422 (75%), Gaps = 8/422 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADMPGLTRDRHYGEGRVGERPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IFIVDGR GL QD++I ++LRK+G+ I+L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P IS+ +G+G+++ ++ L + F ++ E +
Sbjct: 121 AEGMKYTAVATDFYELGLGDPRAISSAHGDGVRDLVDEALD-----QAFSERPELADAAQ 175
Query: 180 IE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
++AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE N K Y LIDT
Sbjct: 176 AHDHGTRIAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDT 235
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ+IS QD +IA FI ESGR+L+
Sbjct: 236 AGLRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALV 295
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ VNKWD + + R IK+++++KL FL+FA ++ISA + I + M+S++ Y ++++
Sbjct: 296 IGVNKWDGLDGHARDRIKHDLERKLQFLAFANVHYISAKQRTGIGALMKSVDDAYAAAMV 355
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L T ++TR L A++ P R + RPKLRYAHQGG NPPI+VIHGN L I Y+R+
Sbjct: 356 KLPTPKLTRVLQEAVEFQQPRRAGISRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRF 415
Query: 418 LE 419
LE
Sbjct: 416 LE 417
>gi|374366363|ref|ZP_09624444.1| GTP-binding protein Der [Cupriavidus basilensis OR16]
gi|373102147|gb|EHP43187.1| GTP-binding protein Der [Cupriavidus basilensis OR16]
Length = 447
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 227/420 (54%), Positives = 319/420 (75%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNR+T SRDALVA+ PGLTRDRHYGEG IG++ FI IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IF+VDGR GL QD++I ++LRK+G+ ++L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFLVDGRLGLAPQDRVIADYLRKTGRRVMLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +++ +FYELG+G+P+ IS+ +G+G++ ++ L + + + +++ +
Sbjct: 121 AEGMKYTNVVSEFYELGMGDPYAISSTHGDGVRELVDEALELAVKERPELAEEDEGDQRG 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE K Y LIDTAG
Sbjct: 181 V---KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ++S QD +IA FI ESGR+L+V
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDVSEQDAHIAGFIVESGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK+++++KL FL FA F+F+SA + I++ + S++ Y ++++ L
Sbjct: 298 VNKWDGLDGHSRDRIKHDLERKLQFLDFANFHFVSAQQRTGISALLRSVDDAYAAAMVKL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L A++ P R RPKLRYAHQGG NPPII++HGN L I + Y+RYLE
Sbjct: 358 PTPQLTRILQEAVEFQQPRRVGATRPKLRYAHQGGSNPPIIIVHGNSLSGIADTYRRYLE 417
>gi|421747045|ref|ZP_16184794.1| GTP-binding protein Der [Cupriavidus necator HPC(L)]
gi|409774363|gb|EKN55994.1| GTP-binding protein Der [Cupriavidus necator HPC(L)]
Length = 447
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 229/420 (54%), Positives = 310/420 (73%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYGEG + +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRGADRPYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GI+ EM KQT+QA++E+D++IFIVDGR GL QD +I ++LRK+G+ ++L +NK
Sbjct: 61 EPVAKEGIVAEMAKQTRQAVVEADVVIFIVDGRLGLAPQDLVIADYLRKTGRRVMLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++++ DFYELG+G+P+ ISA +G+G++ +E L + + + E N
Sbjct: 121 AEGMKYTAVAADFYELGMGDPYAISATHGDGVRELVEEALEAAVEQRPELAEPEDQNTRG 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
K+AIVG+PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE K Y LIDTAG
Sbjct: 181 T---KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVV+LLLDAQQ++S QD +IA FI ESGR+L+V
Sbjct: 238 LRKRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDVSEQDAHIAGFIVESGRALVVG 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R IK+++++KL FL FA F+FISA + I + S++ Y ++++ +
Sbjct: 298 VNKWDGLDGHTRDRIKHDLQRKLQFLDFANFHFISARERTGIGPLLRSVDEAYAAAMLKM 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L A+ P R RPK+RYAHQGG NPPIIV+HGN L + Y+R+LE
Sbjct: 358 PTPKLTRVLHDAVAFQQPRRVGATRPKMRYAHQGGSNPPIIVVHGNSLNAVPETYRRFLE 417
>gi|339483558|ref|YP_004695344.1| GTP-binding protein engA [Nitrosomonas sp. Is79A3]
gi|338805703|gb|AEJ01945.1| GTP-binding protein engA [Nitrosomonas sp. Is79A3]
Length = 465
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/420 (55%), Positives = 313/420 (74%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP LVLVGRPNVGKSTLFNRLT +RDA+VA+ PGLTRDRHYG+G IG+K ++++DTGGF
Sbjct: 1 MKPTLVLVGRPNVGKSTLFNRLTRTRDAIVADIPGLTRDRHYGQGRIGEKPYLVMDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP VK+GI+H M KQT QAI E+D ++FIVDGRQG+ DK+I LRKSGQ I+LV+NK
Sbjct: 61 EPVVKEGILHAMAKQTLQAIDEADKVLFIVDGRQGVTAHDKIIAEQLRKSGQKILLVVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +++ + +FYELG+G+P +SA++G+ IK + L F E + S
Sbjct: 121 TEGMATAVVTAEFYELGLGDPCAVSAIHGDNIKELADYALAD-------FPDVEEEPLES 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+Y K+AIVG+PNVGKSTLIN+LLGE RVI +D PGTTRDSI F + +K Y LIDTAG
Sbjct: 174 -KYPKIAIVGRPNVGKSTLINTLLGEERVIAFDQPGTTRDSIYIDFAHKDKHYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR FE IEKFSVIKTL++I +ANV +L+LDA+ IS QD +IA FI E+GR+L++
Sbjct: 233 LRRRGHVFETIEKFSVIKTLQAIEDANVAVLILDAKNEISDQDAHIAGFILETGRALVIA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + QR IK + +KL FLSFA ++ISA+ + + + + SI+ Y +++ L
Sbjct: 293 VNKWDGLDEYQRDTIKRELTRKLAFLSFAQLHYISALHGSGMKNLLPSIDQAYAAAMADL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TRALI+AI+ HPP R + RPK+RYAHQGG NPP+I++HG L ++ Y+RYLE
Sbjct: 353 STPKLTRALIAAIEKHPPPRGGMSRPKMRYAHQGGSNPPLIIVHGTMLNHVPETYRRYLE 412
>gi|394987681|ref|ZP_10380520.1| ribosome-associated GTPase EngA [Sulfuricella denitrificans skB26]
gi|393792900|dbj|GAB70159.1| ribosome-associated GTPase EngA [Sulfuricella denitrificans skB26]
Length = 465
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 228/420 (54%), Positives = 310/420 (73%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP LVLVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G + ++++DTGGF
Sbjct: 1 MKPTLVLVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGHGRVGDRPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+HEM +QT QA+ E+D I+F+VD RQGL QDK+I + LRK G+P+ L +NK
Sbjct: 61 EPVAKDGILHEMARQTLQAVAEADAIVFLVDARQGLAAQDKIIADQLRKMGRPLFLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + + + +FYELG+G+P +IS +G G+ + +EL + F + +
Sbjct: 121 AEGMRRDVVAAEFYELGLGDPLVISGAHGEGVHDL------VELALESF--PLDEVDEEE 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ K+AIVG+PNVGKSTL+NSLLGE RVI +D PGTTRDSI FE ++K Y LIDTAG
Sbjct: 173 DDHPKIAIVGRPNVGKSTLVNSLLGEERVIAFDQPGTTRDSIYIDFERDSKYYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR+R K FE IEKFSV+KTL+++ +ANVV+L+LDA+Q++S QD +IA FI ESGR+L+V
Sbjct: 233 IRKRGKVFEAIEKFSVVKTLQAVEDANVVVLVLDARQDVSEQDAHIAGFILESGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + ++R+++K++I +KL FL FA F++ISA++ + + +SI+ Y S++I +
Sbjct: 293 VNKWDDLSADRREVVKSDIARKLQFLDFAKFHYISALQGSGVGGLFKSIDGAYASAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T R+TR L+ A H P + RPKLRYAHQGG NPP+++IHG L + YKRYLE
Sbjct: 353 PTPRLTRILMEATTQHQPPKSGPFRPKLRYAHQGGSNPPLVIIHGTSLSSLSASYKRYLE 412
>gi|421866987|ref|ZP_16298649.1| GTP-binding protein EngA [Burkholderia cenocepacia H111]
gi|358073151|emb|CCE49527.1| GTP-binding protein EngA [Burkholderia cenocepacia H111]
Length = 433
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/408 (56%), Positives = 306/408 (75%), Gaps = 5/408 (1%)
Query: 13 VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
+GKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGFEP K GI+HEM
Sbjct: 1 MGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGFEPVAKDGILHEM 60
Query: 73 TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLD 131
+QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK+E + ++++ D
Sbjct: 61 ARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVATD 120
Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
FYELG+G+P ISA +G+G+ + + L E+ Y + +E IK+AIVG+P
Sbjct: 121 FYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEAEEDDPSRGIKIAIVGRP 176
Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
NVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG+RRR K FE IE
Sbjct: 177 NVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIE 236
Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
KFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ VNKWD + + R
Sbjct: 237 KFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHAR 296
Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
K ++ +KL FL FA +FISA K I + M S++ Y +++ L T ++TRALI A
Sbjct: 297 DRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSVDDAYAAAMSKLPTPKLTRALIEA 356
Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 VEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 404
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N L + + PG TRD Y + K + +IDT G
Sbjct: 170 IAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLR--- 226
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
++G + E + +T Q+I +++++I ++D +Q + +QD I F+ + G+ +V+ +N
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVN 286
Query: 120 KSENIN--------SSISLDFYELGIGNPHIISALYGNGIKNFLENI 158
K + ++ + ++ L H ISA GI + ++
Sbjct: 287 KWDGLDDHARDRAKADLTRKLKFLDFAKSHFISAAKKTGIGALMRSV 333
>gi|424904619|ref|ZP_18328129.1| GTP-binding protein EngA [Burkholderia thailandensis MSMB43]
gi|390930597|gb|EIP87999.1| GTP-binding protein EngA [Burkholderia thailandensis MSMB43]
Length = 433
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/408 (56%), Positives = 307/408 (75%), Gaps = 5/408 (1%)
Query: 13 VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
+GKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGFEP K GI+HEM
Sbjct: 1 MGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGFEPVAKDGILHEM 60
Query: 73 TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLD 131
+QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK+E + ++++ D
Sbjct: 61 ARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVASD 120
Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
FYELG+G+P ISA +G+G+ + + L E+ Y + +E + K+AIVG+P
Sbjct: 121 FYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEESEEDAAARGTKIAIVGRP 176
Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
NVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K+Y LIDTAG+RRR K FE IE
Sbjct: 177 NVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKQYTLIDTAGLRRRGKVFEAIE 236
Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
KFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L+V VNKWD + + R
Sbjct: 237 KFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVGVNKWDGLDPHVR 296
Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
+ K ++ +KL FL FA F+FISA + I + M S++ Y +++ L T ++TRALI A
Sbjct: 297 ERTKADLARKLKFLDFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIEA 356
Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 VEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 404
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 26/172 (15%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N L + + PG TRD Y + K + +IDT G
Sbjct: 170 IAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKQYTLIDTAGLR--- 226
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
++G + E + +T Q+I +++++I ++D +Q + +QD I F+ + G+ +V+ +N
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVVGVN 286
Query: 120 KSENINSSIS-------------LDFYELGIGNPHIISALYGNGIKNFLENI 158
K + ++ + LDF + H ISA GI + ++
Sbjct: 287 KWDGLDPHVRERTKADLARKLKFLDFAKF-----HFISAAEKTGIGALMRSV 333
>gi|134277744|ref|ZP_01764459.1| GTP-binding protein EngA [Burkholderia pseudomallei 305]
gi|226197301|ref|ZP_03792878.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei Pakistan
9]
gi|386861538|ref|YP_006274487.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026b]
gi|403518915|ref|YP_006653048.1| GTP-binding protein EngA [Burkholderia pseudomallei BPC006]
gi|418383003|ref|ZP_12966921.1| GTP-binding protein EngA [Burkholderia pseudomallei 354a]
gi|418539390|ref|ZP_13104986.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026a]
gi|418540682|ref|ZP_13106207.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258a]
gi|418546927|ref|ZP_13112113.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258b]
gi|418553146|ref|ZP_13117984.1| GTP-binding protein EngA [Burkholderia pseudomallei 354e]
gi|134251394|gb|EBA51473.1| GTP-binding protein EngA [Burkholderia pseudomallei 305]
gi|225930680|gb|EEH26690.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei Pakistan
9]
gi|385346014|gb|EIF52707.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026a]
gi|385360816|gb|EIF66723.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258a]
gi|385362726|gb|EIF68531.1| GTP-binding protein EngA [Burkholderia pseudomallei 1258b]
gi|385372080|gb|EIF77212.1| GTP-binding protein EngA [Burkholderia pseudomallei 354e]
gi|385376774|gb|EIF81410.1| GTP-binding protein EngA [Burkholderia pseudomallei 354a]
gi|385658666|gb|AFI66089.1| GTP-binding protein EngA [Burkholderia pseudomallei 1026b]
gi|403074557|gb|AFR16137.1| GTP-binding protein EngA [Burkholderia pseudomallei BPC006]
Length = 433
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/408 (56%), Positives = 307/408 (75%), Gaps = 5/408 (1%)
Query: 13 VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
+GKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGFEP K GI+HEM
Sbjct: 1 MGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGFEPVAKDGILHEM 60
Query: 73 TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLD 131
+QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK+E + ++++ D
Sbjct: 61 ARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVASD 120
Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
FYELG+G+P ISA +G+G+ + + L E+ Y + +E + IK+AIVG+P
Sbjct: 121 FYELGLGDPRAISAAHGDGVNDMINEAL--EVAYAG--EPQESEEAAAARGIKIAIVGRP 176
Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
NVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K Y LIDTAG+RRR K FE IE
Sbjct: 177 NVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAGLRRRGKVFEAIE 236
Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
KFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V VNKWD + + R
Sbjct: 237 KFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVGVNKWDGLDPHVR 296
Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
+ K ++ +KL FL FA F+FISA + I + M S++ Y +++ L T ++TRALI A
Sbjct: 297 ERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIEA 356
Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 VEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 404
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 20/169 (11%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N L + + PG TRD Y + K + +IDT G
Sbjct: 170 IAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAGLR--- 226
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
++G + E + +T Q+I +++++I ++D RQ + +QD I F+ + G+ +V+ +N
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVGVN 286
Query: 120 KSENINSSI----------SLDFYELGIGNPHIISALYGNGIKNFLENI 158
K + ++ + L F E H ISA GI + ++
Sbjct: 287 KWDGLDPHVRERTKADLARKLKFLEF--AKFHFISAAEKTGIGALMRSV 333
>gi|167893952|ref|ZP_02481354.1| GTP-binding protein EngA [Burkholderia pseudomallei 7894]
Length = 454
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/408 (56%), Positives = 307/408 (75%), Gaps = 5/408 (1%)
Query: 13 VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
+GKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G + ++++DTGGFEP K GI+HEM
Sbjct: 1 MGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGARPYLVVDTGGFEPVAKDGILHEM 60
Query: 73 TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLD 131
+QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK+E + ++++ D
Sbjct: 61 ARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVASD 120
Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
FYELG+G+P ISA +G+G+ + + L E+ Y + +E + IK+AIVG+P
Sbjct: 121 FYELGLGDPRAISAAHGDGVNDMINEAL--EVAYAG--EPQESEEAAAARGIKIAIVGRP 176
Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
NVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N K Y LIDTAG+RRR K FE IE
Sbjct: 177 NVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAGLRRRGKVFEAIE 236
Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
KFSV+KTL+SI +ANVVILLLDA+Q+IS QD +IA F+ E GR+L+V VNKWD + + R
Sbjct: 237 KFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVGVNKWDGLDPHVR 296
Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
+ K ++ +KL FL FA F+FISA + I + M S++ Y +++ L T ++TRALI A
Sbjct: 297 ERTKADLARKLKFLEFAKFHFISAAEKTGIGALMRSVDDAYAAAMKKLPTPKLTRALIEA 356
Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
++ P R+ +RPKLRYAHQGG+NPPIIVIHGN L + YKRYLE
Sbjct: 357 VEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTETYKRYLE 404
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 20/169 (11%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N L + + PG TRD Y + K + +IDT G
Sbjct: 170 IAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERNGKHYTLIDTAGLR--- 226
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
++G + E + +T Q+I +++++I ++D RQ + +QD I F+ + G+ +V+ +N
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGRALVVGVN 286
Query: 120 KSENINSSI----------SLDFYELGIGNPHIISALYGNGIKNFLENI 158
K + ++ + L F E H ISA GI + ++
Sbjct: 287 KWDGLDPHVRERTKADLARKLKFLEF--AKFHFISAAEKTGIGALMRSV 333
>gi|387902351|ref|YP_006332690.1| GTP-binding protein EngA [Burkholderia sp. KJ006]
gi|387577243|gb|AFJ85959.1| GTP-binding protein EngA [Burkholderia sp. KJ006]
Length = 433
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/408 (56%), Positives = 307/408 (75%), Gaps = 5/408 (1%)
Query: 13 VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
+GKSTLFNRLT SRDALVA+ PGLTRDRHYGEG +G++ ++++DTGGFEP K GI+HEM
Sbjct: 1 MGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGERPYLVVDTGGFEPVAKDGILHEM 60
Query: 73 TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLD 131
+QT+QA+ E+D+++FIVDGR GL QDK I ++LRK+G+PI LV+NK+E + ++++ D
Sbjct: 61 ARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTAVATD 120
Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
FYELG+G+P ISA +G+G+ + + L E+ Y + +E + IK+AIVG+P
Sbjct: 121 FYELGLGDPRAISAAHGDGVTDMINEAL--EVAYAG--QPEEADDNDPSRGIKIAIVGRP 176
Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
NVGKSTL+N+L+GE+RVI +D PGTTRDSI FE N KKY LIDTAG+RRR K FE IE
Sbjct: 177 NVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLRRRGKVFEAIE 236
Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
KFSV+KTL+SI +ANVVILLLDAQQ+IS QD +IA F+ E GR+L++ VNKWD + + R
Sbjct: 237 KFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVNKWDGLDDHAR 296
Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
K ++ +KL FL FA ++ISA K I + M S++ Y +++ L T ++TRALI A
Sbjct: 297 DRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSVDDAYAAAMAKLPTPKLTRALIEA 356
Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
++ P R+ +RPKLRYAHQGG+NPP+IVIHGN L + YKRYLE
Sbjct: 357 VEFQQPRRRGPVRPKLRYAHQGGQNPPLIVIHGNALDAVTETYKRYLE 404
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 16/167 (9%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N L + + PG TRD Y + K + +IDT G
Sbjct: 170 IAIVGRPNVGKSTLVNALIGEDRVIAFDMPGTTRDSIYVDFERNGKKYTLIDTAGLR--- 226
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
++G + E + +T Q+I +++++I ++D +Q + +QD I F+ + G+ +V+ +N
Sbjct: 227 RRGKVFEAIEKFSVVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGRALVIGVN 286
Query: 120 KSENIN--------SSISLDFYELGIGNPHIISALYGNGIKNFLENI 158
K + ++ + ++ L H ISA GI + ++
Sbjct: 287 KWDGLDDHARDRAKADLTRKLKFLDFAKSHYISAAKKTGIGALMRSV 333
>gi|71908594|ref|YP_286181.1| GTP-binding protein EngA [Dechloromonas aromatica RCB]
gi|123760409|sp|Q47BS0.1|DER_DECAR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71848215|gb|AAZ47711.1| Small GTP-binding protein protein domain:GTP-binding protein
[Dechloromonas aromatica RCB]
Length = 443
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/420 (55%), Positives = 309/420 (73%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP LVLVGRPNVGKSTLFNRLT SRDA+VA+ PGLTRDRHYG G +GKK ++++DTGGF
Sbjct: 1 MKPTLVLVGRPNVGKSTLFNRLTKSRDAIVADMPGLTRDRHYGHGKLGKKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP VK+GI+HEM +QT+QAI E+D IIF+VDGR GL DK I N LR+ +P+ + +NK
Sbjct: 61 EPLVKEGILHEMARQTEQAIAEADAIIFVVDGRSGLTPHDKEIANKLRRIDRPVFVAVNK 120
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E +NS + +F+ELG+G P+ ISA +G GI+ +E L + F + E HS
Sbjct: 121 AEGMNSGMVEAEFHELGLGEPNAISAAHGEGIRGLVEMAL-------ESFPEPEEDEWHS 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++VAIVG+PNVGKSTLIN+LLGE RVI +D PGTTRDSI+ FE +KY+L+DTAG
Sbjct: 174 -DSVRVAIVGRPNVGKSTLINTLLGEERVIAFDAPGTTRDSIEIDFERGGRKYVLVDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSV+KTL+SI +ANVVIL++DAQ ++S QD +IA+FI +SGR+L+V
Sbjct: 233 MRKRGKVFESIEKFSVVKTLQSIEDANVVILMVDAQADVSDQDAHIADFILQSGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + R+ + +++KL FL FA F+FISA + + S++ Y +++ +
Sbjct: 293 VNKWDGLDAYTREQTRQILQRKLKFLDFAKFHFISARDNIGLGNMFRSVDSAYAAAMAKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T R+TR LI A+ P + L RPK RYAHQGG NPPIIV+HGN + + + Y+RYLE
Sbjct: 353 TTPRLTRVLIDAVAKQAPAKHGLFRPKPRYAHQGGSNPPIIVVHGNAVDQVTDSYRRYLE 412
>gi|358635852|dbj|BAL23149.1| GTP-binding protein [Azoarcus sp. KH32C]
Length = 442
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/420 (53%), Positives = 312/420 (74%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G++ ++++DT GF
Sbjct: 1 MKPTIVLVGRPNVGKSTLFNRLTRTRDALVADQPGLTRDRHYGIGRVGERDYLVVDTAGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+P K GIMHEM +Q +QAI E+D ++F+VDGR GL D+ I LR++G+P+ L++NK
Sbjct: 61 DPVAKTGIMHEMARQAEQAIAEADALLFLVDGRMGLTPHDEQIAERLRRAGRPVHLIVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE ++ +I + +F+ LG+G+P ISA +G+G+K ++++L E P +++
Sbjct: 121 SEGMDRAIVAAEFHALGLGDPLPISAAHGDGVKQLVDHVLA-EFPTDGEDEEQASGGP-- 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVG+PNVGKSTL+NSLLGE RVI +D PGTTRD+I FE + Y LIDTAG
Sbjct: 178 ----RIAIVGRPNVGKSTLVNSLLGEERVIAFDMPGTTRDAIAIPFERGGRDYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE IEKFSVIKTL++I +ANV +L+LDA Q+IS QD +IA FI +SGR+L+V
Sbjct: 234 LRRRGKVFEAIEKFSVIKTLQAIEQANVAVLVLDASQDISDQDAHIAGFILDSGRALVVA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWDS+ +R++IK +I KL FLSFA F++ISA+K + + M+S++ Y ++ ++L
Sbjct: 294 VNKWDSVDDYRRELIKRDIAHKLGFLSFARFHYISALKGAGVAAVMKSVDGAYAAATVNL 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST R+TR L +A+ P R + RPK+RYAHQGG NPPI+VIHG L+++ N Y RYLE
Sbjct: 354 STPRLTRTLQAALTKQAPPRHGIFRPKMRYAHQGGSNPPIVVIHGAALEHVPNSYVRYLE 413
>gi|372489746|ref|YP_005029311.1| ribosome-associated GTPase EngA [Dechlorosoma suillum PS]
gi|359356299|gb|AEV27470.1| ribosome-associated GTPase EngA [Dechlorosoma suillum PS]
Length = 461
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/421 (54%), Positives = 309/421 (73%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP LVLVGRPNVGKSTLFNRLT +RDA+VA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTLVLVGRPNVGKSTLFNRLTKTRDAIVADLPGLTRDRHYGHGKVGSKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI HEM +QT+QAI E+D ++F+VDGR G+ QDK I N LRK +P+++ +NK
Sbjct: 61 EPLAKDGIFHEMARQTEQAIAEADAVVFVVDGRVGITAQDKEIANKLRKLERPVLVAVNK 120
Query: 121 SENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++ ++ DFYELG+G P +SA +G+G+++ +E L + P K+
Sbjct: 121 AEGMKHTVVAADFYELGLGEPFPVSATHGDGVRDLVEMALA-DFPEPDEDDAKD------ 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E +VAIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I FE N +KY LIDTAG
Sbjct: 174 -ETPRVAIVGRPNVGKSTLINALMGEERVIAFDMPGTTRDAIFVDFERNGRKYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE +EKFSV+KTL+SI +ANVV+L+LDA Q+IS QD +IA F+ ESGRSL+V
Sbjct: 233 LRRRGKVFEAVEKFSVVKTLQSIEDANVVVLVLDADQDISDQDAHIAGFVVESGRSLVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWDS+ +R+ IK +++ KL FLSFA F++ISA+K + S++ Y +++ L
Sbjct: 293 VNKWDSLDAYRRERIKVDLEHKLKFLSFATFHYISALKGLGLEKLFTSVDRAYAAAMAKL 352
Query: 360 STSRITRALISAI-KNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T ++TR L+ A+ + PP + RPKLRYAHQGG NPP+IVIHGN L + Y+RYL
Sbjct: 353 PTPKLTRVLLDAVARQAPPRHGGIFRPKLRYAHQGGSNPPLIVIHGNALDSLPESYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|119897222|ref|YP_932435.1| GTP-binding protein EngA [Azoarcus sp. BH72]
gi|166224303|sp|A1K3Z3.1|DER_AZOSB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|119669635|emb|CAL93548.1| probable GTP-binding protein [Azoarcus sp. BH72]
Length = 442
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 307/420 (73%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G + ++++DT GF
Sbjct: 1 MKPTIVLVGRPNVGKSTLFNRLTKTRDALVADQPGLTRDRHYGVGRVGDRDYLVVDTAGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+P K GIMHEM +Q +QAI E+D+++F+VDGR G D I LR++G+P+V+V+NK
Sbjct: 61 DPVAKDGIMHEMARQAEQAIAEADVLLFLVDGRAGRTPHDDQIAAHLRRAGRPVVVVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E ++ ++++ DF+ LG+G P +SA +G+G+K +E +L P + E
Sbjct: 121 AEGLDRATVAADFHALGLGAPLAVSAAHGDGVKALVELVLA-PFPADDEVEAAEDAGP-- 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+VAIVG+PNVGKSTL+N+LLGE RVI +D PGTTRD+I FE K+Y LIDTAG
Sbjct: 178 ----RVAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDAIAIPFERGGKQYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE +EKFSVIKTL++I EANVV+L+LDA Q+IS QD +IA F+ ++GR+L+V
Sbjct: 234 LRRRGKVFEAVEKFSVIKTLQAIQEANVVVLVLDAAQDISDQDAHIAGFVLDTGRALVVA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ +R +K ++ +KL FLSFA F+ ISA++ I + ++S++ Y +++ +L
Sbjct: 294 INKWDAVDDYRRARLKEDMARKLAFLSFARFHQISALRAEGIAALLKSVDGAYAAAMSNL 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST R+TR + +A+ P R RPKLRYAHQGG NPP+IVIHGN L +I N Y R+LE
Sbjct: 354 STPRLTRTMQAAVAKQAPPRHGSARPKLRYAHQGGMNPPVIVIHGNALDHIPNSYVRFLE 413
>gi|56476106|ref|YP_157695.1| GTP-binding protein EngA [Aromatoleum aromaticum EbN1]
gi|81821192|sp|Q5P7B7.1|DER_AZOSE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56312149|emb|CAI06794.1| GTP-binding protein engA [Aromatoleum aromaticum EbN1]
Length = 442
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 309/420 (73%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G + ++++DT GF
Sbjct: 1 MKPTIVLVGRPNVGKSTLFNRLTKTRDALVADQPGLTRDRHYGIGRVGDRDYLVVDTAGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+P K GIMHEM +Q +QAI E+D ++F+VDGR GL D+ I LR++G+P+ LV+NK
Sbjct: 61 DPVAKDGIMHEMARQAEQAIAEADALLFMVDGRSGLTPHDEQIAARLRRAGRPVYLVVNK 120
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE + + ++ +F+ LG+G+P +SA +G G+K L+ +L P + + + T
Sbjct: 121 SEGMERTMVAAEFHALGLGDPLPVSASHGEGVKQLLDLVLGAFPPDVEPEEDEGRTP--- 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVG+PNVGKST +NSLLGE RVI +D PGTTRD+I FE + + Y LIDTAG
Sbjct: 178 ----RIAIVGRPNVGKSTFVNSLLGEERVIAFDMPGTTRDAIAIPFERDGRHYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE +EKFSVIKTL++I +ANVV+L+LDA Q+IS QD +IA FI E+GR+L+V
Sbjct: 234 LRRRGKVFEAVEKFSVIKTLQAIEQANVVVLVLDASQDISDQDAHIAGFILEAGRALVVA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +R++IK ++ +KLNFLSFA F++ISA+K + + M+S++ Y +++++L
Sbjct: 294 VNKWDDVDDYRRELIKQDLTRKLNFLSFARFHYISALKGAGVAAVMKSVDAAYAAAMVNL 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST R+TR + +A+ P R + RPK+RYAHQGG NPP++VIHG L ++ Y RYLE
Sbjct: 354 STPRLTRTMQAALAKQAPPRHGVFRPKMRYAHQGGNNPPVVVIHGAALDHVPTSYVRYLE 413
>gi|114332129|ref|YP_748351.1| GTP-binding protein EngA [Nitrosomonas eutropha C91]
gi|122313190|sp|Q0AE46.1|DER_NITEC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|114309143|gb|ABI60386.1| small GTP-binding protein [Nitrosomonas eutropha C91]
Length = 468
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 310/420 (73%), Gaps = 6/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP LVLVGRPNVGKSTLFNRLT SRDA+VA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTLVLVGRPNVGKSTLFNRLTRSRDAIVADIPGLTRDRHYGHGRLGLKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP VK GI+H M +QT QA+ E+D+++FIVDGRQGL QDK+I + LRK+G+ I+LV+NK
Sbjct: 61 EPVVKSGILHAMARQTLQAVDEADVVLFIVDGRQGLASQDKIIADQLRKTGRKIILVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S+ +++F+ELG+G P ++SAL+G + ++ L + PY + + + H
Sbjct: 121 AEGMPYSTAAVEFHELGLGTPCVVSALHGEHLGELIDFALE-DYPYAEDIEAEPGQEKHP 179
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +AI G+PNVGKSTLIN+LLGE R+I +D PGTTRDSI FEY ++Y LIDTAG
Sbjct: 180 V----IAIAGRPNVGKSTLINTLLGEERMIAFDQPGTTRDSIYIDFEYGQRRYTLIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR K +E +EKFSV+KTL+SI ANVV+L+LDAQ IS QD +IA FI E+GR+L++
Sbjct: 236 LRRSGKVWETVEKFSVVKTLQSIEAANVVVLVLDAQSGISEQDAHIAGFILETGRALVIA 295
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + QR K ++KL FL+FA ++ISA+ N + + M S++ Y +++ H+
Sbjct: 296 INKWDGMDDYQRDTTKREFERKLAFLNFANLHYISALYGNGVKALMPSVDAAYTAAMAHI 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR +++A+ P R + RPKLRYAHQGG+NPP+I++HG+ L ++ Y+RYLE
Sbjct: 356 PTPKLTRVMLAAVAKQQPPRGGVSRPKLRYAHQGGENPPLIIVHGSMLDHVPQTYRRYLE 415
>gi|30248179|ref|NP_840249.1| GTP-binding protein EngA [Nitrosomonas europaea ATCC 19718]
gi|37999533|sp|Q82XU6.1|DER_NITEU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|30180064|emb|CAD84064.1| GTP-binding protein (HSR1-related):AAA ATPase superfamily
[Nitrosomonas europaea ATCC 19718]
Length = 467
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/420 (55%), Positives = 308/420 (73%), Gaps = 6/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP LVLVGRPNVGKSTLFNRLT SRDA+VA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTLVLVGRPNVGKSTLFNRLTRSRDAIVADIPGLTRDRHYGHGRLGLKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP VK GI+H M KQT QA+ E+DI++FIVDGRQGL QDK+I LRK+GQ I+LV+NK
Sbjct: 61 EPVVKSGILHAMAKQTLQAVDEADIVLFIVDGRQGLAAQDKIIAEQLRKTGQKIILVVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + SS++ +F+ELG+G P +SAL+G+ + ++ L PY++ +
Sbjct: 121 TEGMPYSSVTAEFHELGLGTPCAVSALHGDHLGELIDFALE-GYPYEEETAAEPGQEKCP 179
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +AI G+PNVGKSTLIN+LLGE RVI +D PGTTRDSI FEY + Y LIDTAG
Sbjct: 180 V----IAIAGRPNVGKSTLINTLLGEERVIAFDQPGTTRDSIYVDFEYGQRSYTLIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR K +E +EKFSV+KTL+SI ANVVIL+LDA IS QD +IA FI E+GRSL+V
Sbjct: 236 LRRSGKVWETVEKFSVVKTLQSIEAANVVILVLDAHHEISDQDAHIAGFILETGRSLVVA 295
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + QR+IIK ++KL FLSFA ++ISA+ N + M S++ Y ++ H+
Sbjct: 296 INKWDGLDDYQREIIKREFERKLGFLSFANLHYISALYGNGVKGLMPSVDAAYAAARAHI 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRA+++A+ P R + RPKLRYAHQGG+NPP+I++HG+ L+++ Y+RYLE
Sbjct: 356 PTPKLTRAMLAAVAKQQPPRGGMSRPKLRYAHQGGENPPLIIVHGSMLEHVPQTYRRYLE 415
>gi|348590095|ref|YP_004874557.1| GTP-binding protein EngA [Taylorella asinigenitalis MCE3]
gi|347973999|gb|AEP36534.1| GTP-binding protein EngA [Taylorella asinigenitalis MCE3]
Length = 459
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/433 (53%), Positives = 315/433 (72%), Gaps = 21/433 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR+A+VA+Y GLTRDRHYGEG +G + F++IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRNAIVADYSGLTRDRHYGEGRVGDRPFLVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+VK GIM EM +QT+ AI ESD++IF+VD R G+ D I LRK G P++L +NK+
Sbjct: 64 PKVKTGIMKEMARQTELAISESDVVIFLVDARSGINAHDHEIAVKLRKVGVPVILAVNKA 123
Query: 122 ENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
E + +S S +F+ELG+G P IS+ +G+G+ N +E L+ K + ++ T+I S
Sbjct: 124 EGLQASQASAEFHELGLGEPLAISSAHGDGVANLIEVALS------KIPQVEDETSISSE 177
Query: 181 E--------------YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ IK+A+VG+PNVGKSTLINSLLGE RVI +D PGTTRD+I+ FE
Sbjct: 178 DEVDSDSNETEFKDHRIKLAVVGRPNVGKSTLINSLLGEQRVIAFDMPGTTRDAIEIDFE 237
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N KKY LIDTAG+R+R K FE IEKFSVIKTL++I NVV+L+LDAQ IS QD +IA
Sbjct: 238 SNGKKYKLIDTAGLRKRGKVFESIEKFSVIKTLQAIEACNVVVLILDAQSEISEQDAHIA 297
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
FI ESGR+L+V +NKWD + ++R+ + +++KL FLSFA ++ISA+K I S ++
Sbjct: 298 GFILESGRALVVAINKWDGLSEDKREWVIRELERKLRFLSFAKVHYISALKAYGIKSLLK 357
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+N ++++ L+T ++TR L SA++ PP RK + RPK+RYAHQGG+NPP+++IHGN
Sbjct: 358 SVNQAHEAAFRKLATPKLTRELQSAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVIIHGNA 417
Query: 407 LKYIGNDYKRYLE 419
L I + Y+RYLE
Sbjct: 418 LDAIPDSYRRYLE 430
>gi|399116777|emb|CCG19586.1| GTPp-binding protein EngA [Taylorella asinigenitalis 14/45]
Length = 459
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/433 (53%), Positives = 314/433 (72%), Gaps = 21/433 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR+A+VA+Y GLTRDRHYGEG +G + F++IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRNAIVADYSGLTRDRHYGEGRVGDRPFLVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+VK GIM EM +QT+ AI ESD++IF+VD R G+ D I LRK G P++L +NK+
Sbjct: 64 PKVKTGIMKEMARQTELAISESDVVIFLVDTRSGINAHDHEIAVKLRKVGVPVILAVNKA 123
Query: 122 ENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
E + +S S +F+ELG+G P IS+ +G+G+ N +E L+ K + ++ T+I S
Sbjct: 124 EGLQASQASAEFHELGLGEPLAISSAHGDGVANLIEAALS------KIPQVEDETSISSE 177
Query: 181 E--------------YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ IK+A+VG+PNVGKSTLINSLLGE RVI +D PGTTRD+I+ FE
Sbjct: 178 DEVDSESNETEFKDHRIKLAVVGRPNVGKSTLINSLLGEQRVIAFDMPGTTRDAIEIDFE 237
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N KKY LIDTAG+R+R K FE IEKFSVIKTL++I NVV+L+LDAQ IS QD +IA
Sbjct: 238 SNGKKYKLIDTAGLRKRGKVFESIEKFSVIKTLQAIEACNVVVLILDAQSEISEQDAHIA 297
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
FI ESGR+L+V +NKWD + ++R+ + ++KL FLSFA ++ISA+K I S ++
Sbjct: 298 GFILESGRALVVAINKWDGLSEDKREWVIREFERKLRFLSFAKVHYISALKAYGIKSLLK 357
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+N ++++ L+T ++TR L SA++ PP RK + RPK+RYAHQGG+NPP+++IHGN
Sbjct: 358 SVNQAHEAAFRKLATPKLTRELQSAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVIIHGNA 417
Query: 407 LKYIGNDYKRYLE 419
L I + Y+RYLE
Sbjct: 418 LDAIPDSYRRYLE 430
>gi|325981901|ref|YP_004294303.1| ribosome-associated GTPase EngA [Nitrosomonas sp. AL212]
gi|325531420|gb|ADZ26141.1| ribosome-associated GTPase EngA [Nitrosomonas sp. AL212]
Length = 464
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/420 (53%), Positives = 311/420 (74%), Gaps = 10/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP LVLVGRPNVGKSTLFNRLT +RDA+VA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTLVLVGRPNVGKSTLFNRLTRTRDAIVADIPGLTRDRHYGAGRVGDKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP +K+G+++ M KQT QAI E+D ++FIVDGRQGL DK+I LRKSGQ I+LV+NK
Sbjct: 61 EPVIKEGVLYAMAKQTIQAIDEADKVLFIVDGRQGLTAHDKIIAEQLRKSGQKILLVVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +++ + +F+ELG+G+P +SA++G+ I L ++ + P E +
Sbjct: 121 TEGMTTTVVTAEFFELGLGDPCAVSAMHGDNIHE-LADLALADFP--------EVVEESA 171
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ K+AIVG+PNVGKSTLIN+LLGE RVI +D PGTTRDSI F + +K+Y LIDTAG
Sbjct: 172 SKHPKIAIVGRPNVGKSTLINTLLGEERVIAFDQPGTTRDSIYVDFTHKDKQYTLIDTAG 231
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + E IEKFS IKTL++I +ANVV+L+LDA+ IS QD +IA FI E+GR+L++
Sbjct: 232 LRRRGQVHETIEKFSAIKTLQAIEDANVVVLILDARNEISDQDAHIAGFILETGRALVIA 291
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + QR IK+++ +KL FLSFA ++ISA+ + + SI+ Y +++ L
Sbjct: 292 INKWDGLDEYQRATIKSDLSRKLAFLSFAQLHYISALHGTGMKKLLPSIDIAYAAAMADL 351
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR LI+A++ HPP R + RPK+RYAHQGG NPP+I++HG+ L ++ Y+RYLE
Sbjct: 352 PTPKLTRVLIAAVEKHPPPRGGMSRPKMRYAHQGGSNPPLIIVHGSMLNHVPETYRRYLE 411
>gi|74316616|ref|YP_314356.1| GTP-binding protein EngA [Thiobacillus denitrificans ATCC 25259]
gi|123773049|sp|Q3SL66.1|DER_THIDA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|74056111|gb|AAZ96551.1| GTP-binding protein [Thiobacillus denitrificans ATCC 25259]
Length = 469
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/420 (53%), Positives = 306/420 (72%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P LVLVGRPNVGKSTLFNRLT +RDALV + PG+TRDRHYG G IG K ++++DTGG
Sbjct: 1 MLPTLVLVGRPNVGKSTLFNRLTGTRDALVHDLPGMTRDRHYGRGRIGGKPYLVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP VK GI+ EM +QT QAI E+D IIF+VD R G+ QDK+I + LR+ P++L +NK
Sbjct: 61 EPVVKDGILAEMARQTLQAIDEADAIIFMVDARAGVTPQDKVIADRLRRVTSPVLLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E +N ++ + +F+ELG+G P IS +G+GI + + L F +++E ++
Sbjct: 121 AEGMNRAVVTAEFHELGLGEPLAISGAHGDGIADLVAEALA------PFPEEEEASDDFG 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ K+A+VG+PNVGKSTL+N+L+G RVI +D PGTTRDSI FE K Y+LIDTAG
Sbjct: 175 VP--KIALVGRPNVGKSTLVNALVGAERVIAFDQPGTTRDSIYVDFERGGKPYVLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE +EKFSVIKTL++I +ANVV+L+LDA++NIS QD ++A F+ E+GR+L+V
Sbjct: 233 VRRRGKVFETVEKFSVIKTLQAIEDANVVVLVLDARENISEQDAHLAGFVLETGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + QR +K +I +KL FL FA FN+ISA+K + + ++ I + ++ I L
Sbjct: 293 INKWDGLSAEQRDDVKRDIGRKLAFLDFARFNYISALKAKGLENLLKDIEAAHAAAFIKL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TR L A++ H P + L RPK RYAHQGGKNPP+IV+HGN L+ + +DYKRYLE
Sbjct: 353 STPKLTRVLEMAVEQHAPPKNGLFRPKPRYAHQGGKNPPVIVLHGNALEGLRDDYKRYLE 412
>gi|224826453|ref|ZP_03699555.1| small GTP-binding protein [Pseudogulbenkiania ferrooxidans 2002]
gi|224601554|gb|EEG07735.1| small GTP-binding protein [Pseudogulbenkiania ferrooxidans 2002]
Length = 463
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/420 (53%), Positives = 306/420 (72%), Gaps = 10/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGHGRVGDKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V +GI+ EM +QT QA+ E+D I+F+VDGR G+ QDK+I N LR++ +P+ LV+NK
Sbjct: 61 EPVVDEGILFEMARQTLQAVDEADAIVFLVDGRTGITPQDKIIANRLRQNDRPVFLVVNK 120
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E I+ SI+ +F+EL +G P ISA +G+G++ +E +L P+ +KE
Sbjct: 121 AEGISQSIAGAEFHELALGEPLAISAAHGDGVRELMEMVLE---PFPAATDEKE------ 171
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ + K A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE ++ Y +IDTAG
Sbjct: 172 VRHPKFAVIGRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFERDDHTYTIIDTAG 231
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E IEKFSVIKT+K+I +ANV +L+LDAQ +IS QD IA F E+GR+L+V
Sbjct: 232 VRRRGKVNETIEKFSVIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAGRALVVA 291
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD+I Q++++K+ I +KL FL FA F+FISAI+ I +SI+ Y ++++ L
Sbjct: 292 VNKWDNIDTEQKELVKHEIARKLGFLDFAKFHFISAIEGRGIADLFKSIDEAYRAAMVKL 351
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T ++TR L A++ P R +RPK+RYAHQGG NPPIIVIHGN L + + Y RYLE
Sbjct: 352 ATPKLTRVLEVAVERQAPPRVGQVRPKMRYAHQGGMNPPIIVIHGNALAKVPDSYTRYLE 411
>gi|399114892|emb|CCG17688.1| GTPp-binding protein EngA [Taylorella equigenitalis 14/56]
Length = 452
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/425 (54%), Positives = 313/425 (73%), Gaps = 12/425 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR+A+VA+Y GLTRDRHYGEG IG + F++IDTGGFE
Sbjct: 4 KPVIALVGRPNVGKSTLFNRLTRSRNAIVADYSGLTRDRHYGEGRIGDRPFLVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+VK GI+ EM +QT+ AI ESD++IF+VD R G+ QD I LRK G P++L +NK+
Sbjct: 64 PKVKTGILKEMARQTELAISESDVVIFLVDARSGINAQDHDIATKLRKVGVPVLLAVNKA 123
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF------KKKEF 174
E + + + +F+ELG+G P IS+ +G+G+ N ++ L+ ++P + +EF
Sbjct: 124 EGLQPNQANAEFHELGLGEPLAISSAHGDGVANLIDIALS-KIPQSEEELNSEPDADREF 182
Query: 175 TNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYIL 234
T+ IK+AIVG+PNVGKSTLINSL+GE RVI +D PGTTRD+I+ FE+NNKKY L
Sbjct: 183 TD----HKIKLAIVGRPNVGKSTLINSLIGEQRVIAFDLPGTTRDAIEIDFEHNNKKYKL 238
Query: 235 IDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGR 294
IDTAG+R+R + FE IEKFSVIKTL++I NVV+L+LDAQ IS QD +IA FI ESGR
Sbjct: 239 IDTAGLRKRGRVFESIEKFSVIKTLQAIEACNVVVLVLDAQSEISEQDAHIAGFILESGR 298
Query: 295 SLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
+L+V +NKWD + ++R + ++KL FLSFA +FISA+K I S ++S+N +++
Sbjct: 299 ALVVAINKWDGLDEDKRDWVIREFERKLRFLSFAKVHFISALKSQGIKSLLKSVNLAHEA 358
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ L T ++TR L +A+ PP RK + RPK+RYAHQGG+NPP+++IHGN L I + Y
Sbjct: 359 AFRKLPTPKLTRELQAAVDQQPPPRKGIFRPKMRYAHQGGQNPPLVIIHGNALDAIPDSY 418
Query: 415 KRYLE 419
+RYLE
Sbjct: 419 RRYLE 423
>gi|347540915|ref|YP_004848340.1| GTP-binding protein EngA [Pseudogulbenkiania sp. NH8B]
gi|345644093|dbj|BAK77926.1| GTP-binding protein EngA [Pseudogulbenkiania sp. NH8B]
Length = 463
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/420 (53%), Positives = 305/420 (72%), Gaps = 10/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGHGRVGDKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V +GI+ EM +QT QA+ E+D I+F+VDGR G+ QDK+I N LR++ +P+ LV+NK
Sbjct: 61 EPVVDEGILFEMARQTLQAVDEADAIVFLVDGRTGITPQDKIIANRLRQNDRPVFLVVNK 120
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E I+ SI+ +F+EL +G P ISA +G+G++ +E +L P+ +KE
Sbjct: 121 AEGISQSIAGAEFHELALGEPLAISAAHGDGVRELMEMVLE---PFPAATDEKE------ 171
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ + K A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE ++ Y +IDTAG
Sbjct: 172 VRHPKFAVIGRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFERDDHTYTIIDTAG 231
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E IEKFSVIKT+K+I +ANV +L+LDAQ +IS QD IA F E+GR+L+V
Sbjct: 232 VRRRGKVNETIEKFSVIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAGRALVVA 291
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD+I Q++++K I +KL FL FA F+FISAI+ I +SI+ Y ++++ L
Sbjct: 292 VNKWDNIDTEQKELVKREIARKLGFLDFAKFHFISAIEGRGIADLFKSIDEAYRAAMVKL 351
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T ++TR L A++ P R +RPK+RYAHQGG NPPIIVIHGN L + + Y RYLE
Sbjct: 352 ATPKLTRVLEVAVERQAPPRVGQVRPKMRYAHQGGMNPPIIVIHGNALTKVPDSYTRYLE 411
>gi|319779671|ref|YP_004130584.1| GTP-binding protein EngA [Taylorella equigenitalis MCE9]
gi|397661898|ref|YP_006502598.1| GTPp-binding protein EngA [Taylorella equigenitalis ATCC 35865]
gi|317109695|gb|ADU92441.1| GTP-binding protein EngA [Taylorella equigenitalis MCE9]
gi|394350077|gb|AFN35991.1| GTPp-binding protein EngA [Taylorella equigenitalis ATCC 35865]
Length = 452
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/425 (54%), Positives = 313/425 (73%), Gaps = 12/425 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR+A+VA+Y GLTRDRHYGEG IG + F++IDTGGFE
Sbjct: 4 KPVIALVGRPNVGKSTLFNRLTRSRNAIVADYSGLTRDRHYGEGRIGDRPFLVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+VK GI+ EM +QT+ AI ESD++IF+VD R G+ QD I LRK G P++L +NK+
Sbjct: 64 PKVKTGILKEMARQTELAISESDVVIFLVDARSGINAQDHDIATKLRKVGVPVLLAVNKA 123
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF------KKKEF 174
E + + + +F+ELG+G P IS+ +G+G+ N ++ L+ ++P + +EF
Sbjct: 124 EGLQPNQANAEFHELGLGEPLAISSAHGDGVANLIDIALS-KIPQSEEELNSEPDADQEF 182
Query: 175 TNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYIL 234
T+ IK+AIVG+PNVGKSTLINSL+GE RVI +D PGTTRD+I+ FE+NNKKY L
Sbjct: 183 TD----HKIKLAIVGRPNVGKSTLINSLIGEQRVIAFDLPGTTRDAIEIDFEHNNKKYKL 238
Query: 235 IDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGR 294
IDTAG+R+R + FE IEKFSVIKTL++I NVV+L+LDAQ IS QD +IA FI ESGR
Sbjct: 239 IDTAGLRKRGRVFESIEKFSVIKTLQAIEACNVVVLVLDAQSEISEQDAHIAGFILESGR 298
Query: 295 SLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
+L+V +NKWD + ++R + ++KL FLSFA +FISA+K I S ++S+N +++
Sbjct: 299 ALVVAINKWDGLDEDKRDWVIREFERKLRFLSFAKVHFISALKSQGIKSLLKSVNLAHEA 358
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ L T ++TR L +A+ PP RK + RPK+RYAHQGG+NPP+++IHGN L I + Y
Sbjct: 359 AFRKLPTPKLTRELQAAVDQQPPPRKGIFRPKMRYAHQGGQNPPLVIIHGNALDAIPDSY 418
Query: 415 KRYLE 419
+RYLE
Sbjct: 419 RRYLE 423
>gi|149926362|ref|ZP_01914623.1| GTP-binding protein EngA [Limnobacter sp. MED105]
gi|149824725|gb|EDM83939.1| GTP-binding protein EngA [Limnobacter sp. MED105]
Length = 441
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/420 (54%), Positives = 310/420 (73%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDALVAN PGLTRDRHYG G IG + ++++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRTRDALVANQPGLTRDRHYGVGRIGPREYLVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI EM KQ++QAI+ESD+++F+VDGRQG+ D +I LRK+ + ++LV+NK
Sbjct: 61 EPVAKDGIYAEMAKQSRQAIVESDLVLFLVDGRQGVTPHDHVIAAELRKAKREVILVVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E S++ DF+ELG+G P ISA +G+G++ + +I +LP + E
Sbjct: 121 TEGYTHSMAAADFFELGLGEPETISASHGDGVRQLM-DIACEKLP---VLPEDEAGG--- 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAI G+PNVGKST++N+LLGE RVI +D PGTTRDSI FE N+K Y LIDTAG
Sbjct: 174 -RRIKVAIAGRPNVGKSTMVNTLLGEERVIAFDLPGTTRDSIYIDFERNDKPYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE +EKFSVIKTL++I +ANVVIL+LDAQQ+IS QD +IA FI E+GRSL++
Sbjct: 233 LRKRGKVFESVEKFSVIKTLQAIEDANVVILMLDAQQDISDQDASIAGFIVEAGRSLVLA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWDS+ +++ IK + +KL FL++A F+++SA K I + M+S++ + ++ L
Sbjct: 293 VNKWDSLDDYRKERIKAEVGRKLTFLNYAKFHYVSATKPFGIAAMMKSVDEAHAAAFAKL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TR + +++ P RK + RPKLRYAHQGG+NPPI+++HG L I ++YKRYLE
Sbjct: 353 STPKLTRLIQECVEHQQPPRKGIFRPKLRYAHQGGQNPPIVIVHGTALDAIPDNYKRYLE 412
>gi|349575218|ref|ZP_08887139.1| ribosome-associated GTPase EngA [Neisseria shayeganii 871]
gi|348013226|gb|EGY52149.1| ribosome-associated GTPase EngA [Neisseria shayeganii 871]
Length = 487
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 217/419 (51%), Positives = 304/419 (72%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGRVGSKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VD R GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQSPRPVFLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E N ++ + +FYEL +G P++IS +G+G+ + +E+IL +F +E S
Sbjct: 121 AEGGNQAVLAAEFYELALGEPYVISGAHGDGVYDLMEDILG------RFPDAEE--EGES 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE + + + +IDTAG
Sbjct: 173 AKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERHGRPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVEEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ IK +I +KL FL FA F++ISA+K I+ +SI YD+++I++
Sbjct: 293 VNKWDGIDEERREQIKRDIARKLYFLDFARFHYISALKEKGIDGLFDSIQAAYDAAMINM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SA++ P R L+RPK+RYAHQGG NPP+IV+HGN L++I + Y RYL
Sbjct: 353 PTPKITRVLQSAVERQAPPRAGLVRPKMRYAHQGGMNPPVIVVHGNALQHISDSYTRYL 411
>gi|82703488|ref|YP_413054.1| GTP-binding protein EngA [Nitrosospira multiformis ATCC 25196]
gi|123768150|sp|Q2Y6F9.1|DER_NITMU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|82411553|gb|ABB75662.1| Small GTP-binding protein domain [Nitrosospira multiformis ATCC
25196]
Length = 466
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/421 (53%), Positives = 305/421 (72%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP LVLVGR NVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G + ++++DTGGF
Sbjct: 1 MKPTLVLVGRSNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGHGKLGDRPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP +GI+HEM KQT QAI E+D+++FIVDGR GL QDK++ LR+SG+ +L +NK
Sbjct: 61 EPMATEGILHEMAKQTLQAIDEADVVLFIVDGRSGLTAQDKIVAEQLRRSGRRTLLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S+ + +F+ELG+G P ISA +G+ + N L + + P + ++K+
Sbjct: 121 TEGMAVSVVTAEFHELGLGEPCAISAAHGDNV-NELVTLALQDFPDEPEQERKD------ 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ K+AIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI FE N + Y LIDTAG
Sbjct: 174 -DHPKIAIVGRPNVGKSTLVNTLLGEERVIAFDQPGTTRDSIYIDFERNGRTYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSV+KTL++I +ANVVIL+LDA IS QD +I FI E+GR+L++
Sbjct: 233 LRRRGKVQETVEKFSVVKTLQAIEDANVVILVLDAASEISDQDAHIGGFILEAGRALVLA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLS-FAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWDS+ QR +IK +I +KL FL FA F++ISA+ + S++ Y +++ H
Sbjct: 293 VNKWDSLDEYQRDMIKRDINRKLPFLQNFARFHYISALHGTGTKGLLPSVDAAYGAAMAH 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
L T R+TR L++A++ PP R + RPKLRYAHQGG NPP+I+IHG+ L + Y+RYL
Sbjct: 353 LPTPRLTRTLLAAVEKQPPPRAGMSRPKLRYAHQGGSNPPLIIIHGSALNAVPQTYQRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|348618426|ref|ZP_08884952.1| GTP-binding protein EngA [Candidatus Glomeribacter gigasporarum
BEG34]
gi|347816302|emb|CCD29695.1| GTP-binding protein EngA [Candidatus Glomeribacter gigasporarum
BEG34]
Length = 449
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/422 (52%), Positives = 296/422 (70%), Gaps = 3/422 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDALVA++ G TRDRHYGEG G + + I+DTGGF
Sbjct: 1 MKPVITLVGRPNVGKSTLFNRLTRSRDALVADFAGTTRDRHYGEGRAGSRPYWIVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP ++GI+ +M +QT+QA+ ESD I+FIVD RQGL QD+ I +LRK+G+P+ +++NK
Sbjct: 61 EPAARRGIIRQMAQQTRQAVDESDCILFIVDARQGLTPQDEWIAAWLRKTGRPLCVILNK 120
Query: 121 SENINSS--ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKF-FKKKEFTNI 177
+E ++ ++ DFY LG+G H ISA +GNG+ +E L ++ +E
Sbjct: 121 AEGNAAAYVLAADFYALGLGELHPISAAHGNGVSAMIEAALEAACQGREAQTDTEEEGED 180
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
I++A+ G+PNVGKSTLIN+LLGE RVI D PGTTRDSI F++ + Y LIDT
Sbjct: 181 RQGRGIRIAVAGRPNVGKSTLINALLGEERVIASDAPGTTRDSIAIDFQWQGRDYQLIDT 240
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR + E IEKFSVIKT++SI A+VV+LLLDA+Q IS QD ++A F+ E GR+L+
Sbjct: 241 AGVRRRARVSEAIEKFSVIKTMQSIAAAHVVVLLLDARQEISEQDAHLAGFVVEQGRALV 300
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ VNKWD + QR+ K +++KL FL FA F+FISA++ + M S++ Y + +
Sbjct: 301 IGVNKWDGLDSYQRERAKVALRRKLPFLDFAEFHFISALRKTGLEPLMRSVDAAYQAGMC 360
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L T ++T AL +A PP R LIRPKLRYAHQGG NPP IVIHGN L + Y+RY
Sbjct: 361 KLPTPKLTLALRAAAGFQPPRRSGLIRPKLRYAHQGGHNPPAIVIHGNALDALTPAYQRY 420
Query: 418 LE 419
LE
Sbjct: 421 LE 422
>gi|350571830|ref|ZP_08940146.1| ribosome-associated GTPase EngA [Neisseria wadsworthii 9715]
gi|349791015|gb|EGZ44908.1| ribosome-associated GTPase EngA [Neisseria wadsworthii 9715]
Length = 486
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/419 (52%), Positives = 301/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALVA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVADMPGLTRDRHYGHGKVGSKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM K T QAI E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKHTLQAIDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVFLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N S+ + +FYEL +G+P+++S +G+G+ +E++L +KF +E I
Sbjct: 121 GEGANRSVLAAEFYELALGDPYVVSGAHGDGVYGLIEDVL------EKFPHAEETEEI-- 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 173 AKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ +NV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVEEAVEKFSVIKAMQAVEASNVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +++ IK +I +KL FL FA F++ISA+K I+ SI YD+++I +
Sbjct: 293 VNKWDDIDEDRKAQIKRDIARKLYFLDFAKFHYISALKEKGIDGLFASIQAAYDAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IVIHGN L++I Y RYL
Sbjct: 353 PTPKITRVLQSAIERQAPPRAGLVRPKMRYAHQGGMNPPVIVIHGNALQHIPEAYTRYL 411
>gi|237654043|ref|YP_002890357.1| GTP-binding protein EngA [Thauera sp. MZ1T]
gi|237625290|gb|ACR01980.1| small GTP-binding protein [Thauera sp. MZ1T]
Length = 442
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/420 (53%), Positives = 306/420 (72%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G + ++++DT GF
Sbjct: 1 MKPTIVLVGRPNVGKSTLFNRLTRTRDALVADQPGLTRDRHYGIGRVGDRDYLVVDTAGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+P K GIMHEM +Q +QAI E+D+++F+VDGR G D+ I LR++G+P+ +V+NK
Sbjct: 61 DPVAKDGIMHEMARQAEQAIAEADVLLFLVDGRAGRTPHDENIAARLRRAGRPVHVVVNK 120
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E I+ + ++ DF+ LG+G+P +SA +G+G+K +E +L P+ +K+ +
Sbjct: 121 AEGIDRAMVAADFHALGLGDPLPVSAAHGDGVKQLVELVLA---PFPADDEKEHSDD--- 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E KVAIVG+PNVGKSTL+N+LLGE RVI +D PGTTRD+I FE K+Y LIDTAG
Sbjct: 175 -EGPKVAIVGRPNVGKSTLVNTLLGEERVIAFDMPGTTRDAISIPFERGGKRYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE +EKFSVIKTL+++ E NVV+L+LDA Q+IS QD +IA F E+GR+L+V
Sbjct: 234 LRRRGKVFEAVEKFSVIKTLQAVQECNVVVLVLDAAQDISDQDAHIAGFALEAGRALVVA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ +R +K +I +KL FLSFA F+ ISA+K I ++S++ Y ++ +L
Sbjct: 294 INKWDAVDDYRRDRLKADIARKLAFLSFARFHQISALKAEGIAGLLKSVDAAYAAATANL 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T R+TRAL A+ P R L RPK+RYAHQGG NPP+IVIHGN L I Y RYLE
Sbjct: 354 ATPRLTRALQQAVARQAPPRHGLARPKMRYAHQGGMNPPVIVIHGNALDDIPQSYVRYLE 413
>gi|452126153|ref|ZP_21938736.1| GTP-binding protein Der [Bordetella holmesii F627]
gi|452129521|ref|ZP_21942096.1| GTP-binding protein Der [Bordetella holmesii H558]
gi|451921248|gb|EMD71393.1| GTP-binding protein Der [Bordetella holmesii F627]
gi|451923156|gb|EMD73298.1| GTP-binding protein Der [Bordetella holmesii H558]
Length = 451
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/422 (54%), Positives = 309/422 (73%), Gaps = 8/422 (1%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR ALVA+Y GLTRDRHYGEG +G FI+IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDIPFIVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
P K GI+ EM +QT+QAI E+D+++F+VD R GL D I LRKSGQ ++L +NK
Sbjct: 64 PVAKDGILAEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIARLLRKSGQQRVLLAVNK 123
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E +N ++ +FYELG+G PH ISA +G+GI + +E L + P ++ E +
Sbjct: 124 AEGMNEGKAISEFYELGLGEPHPISAAHGDGIGDLIEVALQDLAAPEEEV----EPSEQD 179
Query: 179 SIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+E+ IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+ FE + +KY LIDT
Sbjct: 180 GVEHRIKLAIVGRPNVGKSTLINTLMGEERVIAFDLPGTTRDAIEIDFERDGRKYTLIDT 239
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+R K FE +EKFSVIKTL++I +NVV+L+LDAQ IS QD +IA F+ E+GR+++
Sbjct: 240 AGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQSEISEQDAHIAGFVLETGRAVV 299
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V +NKWD + QR+ I+ ++KL FLSFA + ISA+K I ++S+N + ++
Sbjct: 300 VAINKWDGLDDEQRERIEREFQRKLRFLSFARMHTISALKGQGIRPLLKSVNAAHAAAFA 359
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
LST ++TR L +A++ P RK + RPK+RYAHQGG+NPP+IV+HG+ L I + Y+RY
Sbjct: 360 KLSTPKLTRELQAAVEQQQPPRKGIFRPKMRYAHQGGQNPPLIVVHGSALDAIPDSYRRY 419
Query: 418 LE 419
LE
Sbjct: 420 LE 421
>gi|91775967|ref|YP_545723.1| GTP-binding protein EngA [Methylobacillus flagellatus KT]
gi|91709954|gb|ABE49882.1| Small GTP-binding protein domain [Methylobacillus flagellatus KT]
Length = 499
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/419 (53%), Positives = 301/419 (71%), Gaps = 7/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 2 MLPTIVLVGRPNVGKSTLFNRLTKTRDALVADLPGLTRDRHYGRGVVGSKPYLVVDTGGF 61
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+ EM +QT AI E+D++IF+VDGR GL QDK+I LRKS +PI+L +NK
Sbjct: 62 EPLVDSGILKEMARQTLLAIDEADVVIFLVDGRNGLAPQDKVIAERLRKSQRPILLAVNK 121
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +I S +F+ELG+G+P IS+ +G G+++ +EL + F + E
Sbjct: 122 TEGMQRAIASAEFHELGLGHPLSISSAHGEGVRDL------VELALENFPEPGEEEESQG 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ KVAIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI E N K+Y +IDTAG
Sbjct: 176 NQVPKVAIVGRPNVGKSTLVNALLGEERVIAFDQPGTTRDSIYLDLERNGKRYTIIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE +EKFSVIKT+++I EANV IL++DAQ+ I+ QD +++ +I +SGR+L+V
Sbjct: 236 VRRRGKVFEAVEKFSVIKTMQAIEEANVAILVVDAQEGITEQDAHVSAYILDSGRALVVA 295
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + ++R+ IK I +KL FL FA F++ISA++ + S++ Y +++ L
Sbjct: 296 VNKWDGLEDDKREWIKREIDRKLQFLDFAKFHYISALRKKGLGELFHSVDAAYKAAMAKL 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST ++TR L A H P K IRPKLRYAHQGG NPPI+VIHGN + I Y+RYL
Sbjct: 356 STPQLTRVLEDATMQHQPPISKGIRPKLRYAHQGGSNPPIVVIHGNHVDGIKESYRRYL 414
>gi|253999419|ref|YP_003051482.1| GTP-binding protein EngA [Methylovorus glucosetrophus SIP3-4]
gi|313201441|ref|YP_004040099.1| small GTP-binding protein [Methylovorus sp. MP688]
gi|253986098|gb|ACT50955.1| small GTP-binding protein [Methylovorus glucosetrophus SIP3-4]
gi|312440757|gb|ADQ84863.1| small GTP-binding protein [Methylovorus sp. MP688]
Length = 523
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/420 (54%), Positives = 300/420 (71%), Gaps = 7/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P +VLVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G G K F+++DTGGF
Sbjct: 1 MLPTIVLVGRPNVGKSTLFNRLTKSRDALVADLPGLTRDRHYGRGIGGDKPFLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+ EM KQT AI E+D++IF+VDGR GL QDK+I + LRKS +P++L +NK
Sbjct: 61 EPLVDSGILKEMAKQTLLAIDEADVVIFMVDGRNGLAPQDKVIADRLRKSQRPVLLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +I S +F+ELG+G+P IS+ +G G+++ +EL F + +
Sbjct: 121 TEGMQRAIVSAEFHELGLGDPLSISSAHGEGVRDL------VELALADFPEPEPEEENDG 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
KVAIVG+PNVGKSTL+N+LLG+ RVI +D PGTTRDSI E N K Y +IDTAG
Sbjct: 175 SRTPKVAIVGRPNVGKSTLVNALLGQERVIAFDQPGTTRDSIHIDLERNGKHYTIIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE IEKFSVIKT+++I EANV IL++DAQ+ I+ QD ++A +I E+GR+L+V
Sbjct: 235 VRKRGKVFEAIEKFSVIKTIQAIEEANVAILVVDAQEGITEQDAHVAAYILEAGRALVVA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++R IK I +KL FL FA F++ISA++ + S++ Y +++ L
Sbjct: 295 INKWDGLKEDERDWIKREIDRKLQFLDFAKFHYISALRKKGLPELFTSVDGAYKAAMAKL 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TR L AI H P K IRPKLRYAHQGG NPPI+VIHGN + + + YKRYLE
Sbjct: 355 STPQLTRVLEDAIIQHQPPISKGIRPKLRYAHQGGSNPPIVVIHGNHVDGVKDSYKRYLE 414
>gi|257093699|ref|YP_003167340.1| GTP-binding protein EngA [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046223|gb|ACV35411.1| small GTP-binding protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 492
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/420 (53%), Positives = 305/420 (72%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MK +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKTSIVLVGRPNVGKSTLFNRLTRTRDALVADLPGLTRDRHYGHGKLGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GIM+ M +QT+QAI E+D++I +VDGR GL DK I N LRK +P+++ +NK
Sbjct: 61 EPLAKDGIMYHMARQTEQAIDEADVVILVVDGRSGLTALDKEIANRLRKVDRPVLVAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE ++ + + DF+ELG+G P ISA +G G++ ++ L +E P + + + +++
Sbjct: 121 SEGMSVGVVVSDFHELGLGEPLAISAAHGEGVRALID--LALE-PCAEAVESEPESDV-- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+KVAIVG+PNVGKSTLIN+LLGE+RVI +D PGTTRD+I+ FE KKY LIDTAG
Sbjct: 176 ---VKVAIVGRPNVGKSTLINALLGEDRVIAFDQPGTTRDAIEVDFERGGKKYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + FE IEKFSVIKTL+++ +A VVIL+LDA+Q+I+ QD +IA FI ESGR+L+V
Sbjct: 233 LRRRGRVFETIEKFSVIKTLQAVEDAQVVILVLDARQDIAEQDAHIAAFIRESGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + R+ IK ++ +L F+ FA F+++SA++ + S++ Y ++I L
Sbjct: 293 VNKWDGLDSYVREQIKGALEGQLGFIDFARFHYVSALRGQGLEPLFRSVDAAYRAAIADL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L A+ P R L RPKLRYAHQGG+NPP+IVIHGN L + Y+RYLE
Sbjct: 353 PTPQLTRTLSEAVARQAPPRSGLFRPKLRYAHQGGRNPPLIVIHGNALDKVPESYRRYLE 412
>gi|294670887|ref|ZP_06735743.1| hypothetical protein NEIELOOT_02591 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307374|gb|EFE48617.1| hypothetical protein NEIELOOT_02591 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 491
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/419 (52%), Positives = 298/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGRLGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VD R GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + + +FYEL +G PH+IS +G+G+ + +E +L + F KE +N
Sbjct: 121 GEGGRHDVLAAEFYELALGEPHVISGAHGDGVYHLIEKVL------EHFPDAKEESN--E 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L++
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVIA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R IK +I +KL FL FA F++ISA+K I+ +SI YD++ I +
Sbjct: 293 VNKWDGISEERRNDIKRDIARKLYFLDFAKFHYISALKERGIDGLFDSIQAAYDAAFIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IVIHGN L++I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPARAGLVRPKMRYAHQGGMNPPVIVIHGNSLQHIPDSYTRYL 411
>gi|261365613|ref|ZP_05978496.1| ribosome-associated GTPase EngA [Neisseria mucosa ATCC 25996]
gi|288565845|gb|EFC87405.1| ribosome-associated GTPase EngA [Neisseria mucosa ATCC 25996]
Length = 485
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/419 (53%), Positives = 298/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G PH+IS +G+G+ +E IL + F + E
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------EKFPEPEAEET-E 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I R+ IK +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEEWREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 STPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|187478830|ref|YP_786854.1| GTP-binding protein EngA, partial [Bordetella avium 197N]
gi|115423416|emb|CAJ49950.1| GTP-binding protein [Bordetella avium 197N]
Length = 451
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 222/420 (52%), Positives = 305/420 (72%), Gaps = 4/420 (0%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR ALVA+Y GLTRDRHYGEG +G FI+IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDIPFIVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
P K GI+ EM +QT+QAI E+D+++F+VD R G+ D I LRKSGQ ++L +NK
Sbjct: 64 PVAKDGILAEMARQTRQAIAEADVVVFLVDARAGINAHDHEIARLLRKSGQQRVLLAVNK 123
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E +N + DF+ELG+G PH ISA +G+G+ + +E+ L +P E +
Sbjct: 124 AEGMNEGKATSDFFELGLGEPHPISAAHGDGVVDLIESALADLVPPADEIADAEEGEVQ- 182
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+ FE + ++Y LIDTAG
Sbjct: 183 -HRIKLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIEFERDGRQYTLIDTAG 241
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE +EKFSVIKTL++I +NVV+L+LDAQ IS QD +IA F+ E+GR+++V
Sbjct: 242 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQSEISEQDAHIAGFVLETGRAVVVA 301
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +QR+ I+ ++KL FL+FA + ISA+K I ++S+N + ++ L
Sbjct: 302 INKWDGLDDDQRERIEREFQRKLRFLTFARMHTISALKGQGIRPLLKSVNAAHAAAFAKL 361
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TR L +A++ P RK + RPK+RYAHQGG+NPP+I++HG+ L I + Y+RYLE
Sbjct: 362 STPKLTRELQAAVEQQQPPRKGIFRPKMRYAHQGGQNPPLIIVHGSALDAIPDSYRRYLE 421
>gi|298368463|ref|ZP_06979781.1| ribosome-associated GTPase EngA [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282466|gb|EFI23953.1| ribosome-associated GTPase EngA [Neisseria sp. oral taxon 014 str.
F0314]
Length = 492
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/419 (52%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 8 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 67
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 68 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSQRPVYLAVNK 127
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G PH+IS +G+G+ +E IL +KF + +
Sbjct: 128 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL------EKFPEPE--AEEAD 179
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 180 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 239
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 240 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 299
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ IK +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 300 VNKWDGISEERREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 359
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 360 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 418
>gi|291613885|ref|YP_003524042.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1]
gi|291583997|gb|ADE11655.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1]
Length = 465
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/420 (51%), Positives = 308/420 (73%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P LVLVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G++ ++++DTGG
Sbjct: 1 MLPTLVLVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGRGRVGERPYLVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K+GIMHEM KQT+QA+ E+D+++FIVDGR GL QD++I LRK+G+P++L++NK
Sbjct: 61 EPVAKEGIMHEMAKQTRQAVDEADLVLFIVDGRDGLTPQDRIIATQLRKTGRPVMLLVNK 120
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++ DF+ELG+G P IS+ +G+ + +E L ELP E
Sbjct: 121 AEGMRRERVTADFHELGLGEPIPISSAHGDNVAEMIEVALD-ELP------AAEVEAEEK 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ K+AIVG+PNVGKSTL+N++LGE RVI +D PGTTRDSI FE ++Y +IDTAG
Sbjct: 174 SDHPKLAIVGRPNVGKSTLVNAILGEERVIAFDQPGTTRDSIYIDFERAGRQYTIIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K E IEKFSV+KTL++I +ANVV+L++DA+ I+ QD ++A+F+ ++GR+L++
Sbjct: 234 IRRRGKIDEAIEKFSVVKTLQAIEDANVVVLVVDARDQITEQDAHLADFVLQAGRALVLA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +R +K +I++KL+FLSFA +FISA+ +++ ++S+N Y +++ +
Sbjct: 294 VNKWDGLDEYKRDTVKRDIERKLHFLSFAKHHFISALNGTGVDALLKSVNQAYTAAMTKM 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L A++ P R RPK+RYAHQGG NPP+I+IHG+ L I + Y RYLE
Sbjct: 354 PTPQLTRVLEEALQKQQPPRVGSFRPKMRYAHQGGSNPPLIIIHGSALDKIPDSYTRYLE 413
>gi|145589468|ref|YP_001156065.1| GTP-binding protein EngA [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189037153|sp|A4SYD7.1|DER_POLSQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|145047874|gb|ABP34501.1| small GTP-binding protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 454
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/423 (54%), Positives = 308/423 (72%), Gaps = 10/423 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGRPNVGKSTLFNRLT SRDALVA++ GLTRDRHYG+G IG+++FI +DTGGF
Sbjct: 1 MNPVITIVGRPNVGKSTLFNRLTRSRDALVADFSGLTRDRHYGKGRIGERAFICVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+ EM KQTKQA+ ESDI+IF+VDGR G+ QD++I +FLRK+G+P++L +NK
Sbjct: 61 EPVAKTGIVAEMAKQTKQAVAESDIVIFLVDGRLGMAPQDRVIADFLRKTGRPVILAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILT---IELPYKKFFKKKEFTN 176
+E + S I + DF+ELG+G P IS+ +G+G+K +++ L I P + E N
Sbjct: 121 TEGMQSGIVTADFHELGLGEPFPISSAHGDGVKGLIDDALDSLGIAEP-----DEDELAN 175
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ +K+A+VG+PNVGKSTLIN L+GE RVI +D PGTTRD+I+ FE N K YIL+D
Sbjct: 176 DPN-RPMKIAVVGRPNVGKSTLINKLIGEERVIAFDMPGTTRDAIEVPFERNGKPYILVD 234
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RRR K FE IEKFSV+KTL++I + NVVIL+LDAQQ+IS QD +IA FI E+GR+L
Sbjct: 235 TAGLRRRGKVFEAIEKFSVVKTLQAIADCNVVILMLDAQQDISEQDAHIAGFIVEAGRAL 294
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+V VNKWD + ++ + I +KL FL FA + ISA K + + ++ Y +++
Sbjct: 295 VVAVNKWDGLDAYVKERARLEIAQKLRFLDFANVHPISAKKGTGLKDLFKDVDAAYAAAM 354
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
L T R+TR L AI++ P R + RPKLRYAHQGG NPPI+VIHG L + + YKR
Sbjct: 355 AKLPTPRLTRILQEAIEHQQPKRVGMGRPKLRYAHQGGMNPPIVVIHGTSLSGVTDSYKR 414
Query: 417 YLE 419
YLE
Sbjct: 415 YLE 417
>gi|456063405|ref|YP_007502375.1| small GTP-binding protein [beta proteobacterium CB]
gi|455440702|gb|AGG33640.1| small GTP-binding protein [beta proteobacterium CB]
Length = 454
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/421 (53%), Positives = 310/421 (73%), Gaps = 6/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGRPNVGKSTLFNRLT SRDALVA++ GLTRDRHYG+G IG+++FI +DTGGF
Sbjct: 1 MNPVITIVGRPNVGKSTLFNRLTRSRDALVADFSGLTRDRHYGKGRIGERAFICVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+ EM KQTKQA+ ESDI+IF+VDGR G+ QD++I +FLRK+G+P++L +NK
Sbjct: 61 EPVAKTGIVAEMAKQTKQAVAESDIVIFLVDGRLGMAPQDRVIADFLRKTGRPVILAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
+E + + + + DF+ELG+G P IS+ +G+G++ +++ L ++ +P + + + N
Sbjct: 121 TEGMQAGVVTADFHELGLGEPFPISSAHGDGVRGLIDDALDSLGVPEPEPEELENDPN-- 178
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+K+A+VG+PNVGKSTLIN L+GE RVI +D PGTTRD+I+ FE N K YIL+DTA
Sbjct: 179 --RPMKIAVVGRPNVGKSTLINKLIGEERVIAFDMPGTTRDAIEVPFERNGKPYILVDTA 236
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K FE IEKFSV+KTL++I + NVVIL+LDAQQ+IS QD +IA FI E+GR+L+V
Sbjct: 237 GLRRRGKVFEAIEKFSVVKTLQAIADCNVVILMLDAQQDISEQDAHIAGFIVEAGRALVV 296
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + ++ + I +KL FL FA + ISA K + + ++ Y +++
Sbjct: 297 AVNKWDGLDAYVKERARLEIAQKLRFLDFANVHPISAKKGTGLKELFKDVDLAYAAAMAK 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
L T ++TR L AI++ P R + RPKLRYAHQGG NPPI+VIHG L + + YKRYL
Sbjct: 357 LPTPKLTRILQEAIEHQQPKRVGMGRPKLRYAHQGGMNPPIVVIHGTSLSGVTDSYKRYL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|225024393|ref|ZP_03713585.1| hypothetical protein EIKCOROL_01268 [Eikenella corrodens ATCC
23834]
gi|224942774|gb|EEG23983.1| hypothetical protein EIKCOROL_01268 [Eikenella corrodens ATCC
23834]
Length = 485
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/419 (52%), Positives = 297/419 (70%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D +IF+VD R GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + + +FYEL +G PH+IS +G+G+ +E +L + F + E +
Sbjct: 121 GEGGRRDVLAAEFYELALGEPHVISGAHGDGVYYLMEEVL------ENFPEATEEDS--E 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE + K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERDGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ +NV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVEEAVEKFSVIKAMQAVEASNVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R IK +I+ KL+FL FA F+FISA+K I+ SI YD++ I +
Sbjct: 293 VNKWDGISEERRNTIKKDIEHKLHFLDFAKFHFISALKERGIDGLFASIQSAYDAAFIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IVIHGN L+++ + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPARAGLVRPKMRYAHQGGMNPPVIVIHGNSLQHVADSYTRYL 411
>gi|255065190|ref|ZP_05317045.1| ribosome-associated GTPase EngA [Neisseria sicca ATCC 29256]
gi|255050611|gb|EET46075.1| ribosome-associated GTPase EngA [Neisseria sicca ATCC 29256]
Length = 535
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/419 (52%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 51 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 110
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 111 EPVVDSGILHEMAKQTFQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 170
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G PH+IS +G+G+ +E IL +KF + +
Sbjct: 171 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL------EKFPEPE--AEEAD 222
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 223 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 282
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 283 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 342
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ IK +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 343 VNKWDGISEERREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 402
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 403 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 461
>gi|419795877|ref|ZP_14321457.1| ribosome-associated GTPase EngA [Neisseria sicca VK64]
gi|385700090|gb|EIG30347.1| ribosome-associated GTPase EngA [Neisseria sicca VK64]
Length = 485
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/419 (52%), Positives = 298/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G PH+IS +G+G+ +E IL + F + E
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------ENFPEPEAEEA-D 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ IK +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|349609886|ref|ZP_08889255.1| GTP-binding protein engA [Neisseria sp. GT4A_CT1]
gi|348611082|gb|EGY60753.1| GTP-binding protein engA [Neisseria sp. GT4A_CT1]
Length = 485
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/419 (52%), Positives = 298/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G PH+IS +G+G+ +E IL + F + E
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------ENFPEPEAEEA-D 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ IK +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|412338299|ref|YP_006967054.1| GTP-binding protein [Bordetella bronchiseptica 253]
gi|408768133|emb|CCJ52892.1| putative GTP-binding protein [Bordetella bronchiseptica 253]
Length = 451
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/422 (53%), Positives = 308/422 (72%), Gaps = 7/422 (1%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G F++IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGDTPFLVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
P K GI+ EM +QT+QAI E+D+++F+VD R G+ D I LRKSGQ ++L +NK
Sbjct: 64 PVAKDGILAEMARQTRQAIAEADVVVFLVDARAGVNAHDHEIARLLRKSGQQRVLLAVNK 123
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNI 177
+E + + + DF+ELG+G PH ISA +G+GI + +E L+ + P + ++
Sbjct: 124 AEGMGVGNATSDFHELGLGEPHPISAAHGDGIVDLIEVALSGLVAPPVDTGEQLEQDVVD 183
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
H I K+AIVG+PNVGKSTLIN+LLGE RVI +D PGTTRD+I+ FE + +KY LIDT
Sbjct: 184 HRI---KLAIVGRPNVGKSTLINTLLGEERVIAFDMPGTTRDAIEIDFERDGRKYTLIDT 240
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+R K FE IEKFSVIKTL++I +NVV+L++DAQ +S QD +IA F+ E+GR+++
Sbjct: 241 AGLRKRGKVFEAIEKFSVIKTLQAIEASNVVLLMIDAQAEVSEQDAHIAGFVLETGRAVV 300
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V +NKWD + +QR+ I+ ++KL FLSFA + ISA+K + ++S+N + ++
Sbjct: 301 VAINKWDGLDSDQRERIEREFQRKLRFLSFARMHTISALKGQGVKPLLKSVNAAHAAAFA 360
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
LST R+TR L +A++ PP RK + RPK+RYAHQGG+NPP+IVIHGN L + + Y+RY
Sbjct: 361 KLSTPRLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLIVIHGNALDAVPDSYRRY 420
Query: 418 LE 419
LE
Sbjct: 421 LE 422
>gi|340362433|ref|ZP_08684818.1| ribosome-associated GTPase EngA [Neisseria macacae ATCC 33926]
gi|339887441|gb|EGQ76997.1| ribosome-associated GTPase EngA [Neisseria macacae ATCC 33926]
Length = 485
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/419 (52%), Positives = 298/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G PH+IS +G+G+ +E IL + F + E
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEKIL-------ENFPESEAEEA-D 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 173 VKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ IK +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SA++ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|15676748|ref|NP_273893.1| GTP-binding protein EngA [Neisseria meningitidis MC58]
gi|385853467|ref|YP_005899981.1| GTP-binding protein [Neisseria meningitidis H44/76]
gi|416197331|ref|ZP_11618541.1| GTP-binding protein [Neisseria meningitidis CU385]
gi|421540026|ref|ZP_15986179.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93004]
gi|427827899|ref|ZP_18994920.1| small GTP-binding domain protein [Neisseria meningitidis H44/76]
gi|433464834|ref|ZP_20422319.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM422]
gi|433488083|ref|ZP_20445251.1| ribosome-associated GTPase EngA [Neisseria meningitidis M13255]
gi|433490203|ref|ZP_20447332.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM418]
gi|433504645|ref|ZP_20461585.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9506]
gi|433506871|ref|ZP_20463783.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9757]
gi|433508979|ref|ZP_20465852.1| ribosome-associated GTPase EngA [Neisseria meningitidis 12888]
gi|433511116|ref|ZP_20467948.1| ribosome-associated GTPase EngA [Neisseria meningitidis 4119]
gi|26006741|sp|Q9JZY1.1|DER_NEIMB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|7226088|gb|AAF41263.1| essential GTPase [Neisseria meningitidis MC58]
gi|316984259|gb|EFV63235.1| small GTP-binding domain protein [Neisseria meningitidis H44/76]
gi|325140003|gb|EGC62532.1| GTP-binding protein [Neisseria meningitidis CU385]
gi|325200471|gb|ADY95926.1| GTP-binding protein [Neisseria meningitidis H44/76]
gi|402320310|gb|EJU55801.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93004]
gi|432204321|gb|ELK60366.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM422]
gi|432224549|gb|ELK80314.1| ribosome-associated GTPase EngA [Neisseria meningitidis M13255]
gi|432228111|gb|ELK83812.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM418]
gi|432242160|gb|ELK97684.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9506]
gi|432242660|gb|ELK98178.1| ribosome-associated GTPase EngA [Neisseria meningitidis 9757]
gi|432247793|gb|ELL03228.1| ribosome-associated GTPase EngA [Neisseria meningitidis 12888]
gi|432248607|gb|ELL04032.1| ribosome-associated GTPase EngA [Neisseria meningitidis 4119]
Length = 485
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/419 (52%), Positives = 301/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL + P + +E H
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILE-KFPEPE---AEEADARHP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVIT+D GTTRDSI FE K + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEERVITFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|303257594|ref|ZP_07343606.1| ribosome-associated GTPase EngA [Burkholderiales bacterium 1_1_47]
gi|330999635|ref|ZP_08323344.1| ribosome biogenesis GTPase Der [Parasutterella excrementihominis
YIT 11859]
gi|302859564|gb|EFL82643.1| ribosome-associated GTPase EngA [Burkholderiales bacterium 1_1_47]
gi|329574141|gb|EGG55717.1| ribosome biogenesis GTPase Der [Parasutterella excrementihominis
YIT 11859]
Length = 443
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 305/420 (72%), Gaps = 7/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDRHYG+G IG K +++IDTGGF
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRHYGDGRIGDKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP +GI+ EMT Q + AI ESD+++F+VDGR GL QD+ I LR+SG+ LV+NK
Sbjct: 61 EPIRTEGIVKEMTGQAQLAITESDVVLFLVDGRAGLTPQDQRIAQNLRESGKKTYLVVNK 120
Query: 121 SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+E + + +FYEL +G P+ ISA +G G+K ++ +L + F +KE
Sbjct: 121 AEGLTETAKAEFYELALGEPYTISAAHGEGVKALMDLVL------EPFPTEKEIDEEEDF 174
Query: 181 EY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ IKVAI G+PN GKSTLIN+L+GE+R+I +D PGTTRD+I+ F+Y ++ Y LIDTAG
Sbjct: 175 KHKIKVAIAGRPNAGKSTLINALIGEDRLIAFDMPGTTRDAIEVEFQYKDRDYTLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K FE IEKFSVIKTL++I +NVV+LLLDA I+ QD NIA +I ESGR+L+V
Sbjct: 235 LRRKGKVFEAIEKFSVIKTLQAIESSNVVVLLLDAHAGIAEQDANIAGYILESGRALVVG 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWDS+ +R+ +K +++KL+FL +A +ISA++ ++ + ++N + ++ + L
Sbjct: 295 VNKWDSLDDYERRRVKEELERKLHFLRWAKIVYISALEKRGLHHLLNAVNDAHTAAFMKL 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TRALI A P R RPK+RYAHQGG+NPP+IV+HGN L+ + Y+RYLE
Sbjct: 355 STPKLTRALIEATTRQLPPRAGGGRPKMRYAHQGGQNPPVIVVHGNALQDVPESYRRYLE 414
>gi|421537871|ref|ZP_15984053.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93003]
gi|402317908|gb|EJU53435.1| ribosome-associated GTPase EngA [Neisseria meningitidis 93003]
Length = 485
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/419 (52%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E IL P + +E H
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEILE-NFPEPE---AEEADAKHP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERKGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+S ESI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDSLFESIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|345875075|ref|ZP_08826871.1| ribosome-associated GTPase EngA [Neisseria weaveri LMG 5135]
gi|417958224|ref|ZP_12601140.1| ribosome-associated GTPase EngA [Neisseria weaveri ATCC 51223]
gi|343967286|gb|EGV35535.1| ribosome-associated GTPase EngA [Neisseria weaveri ATCC 51223]
gi|343969502|gb|EGV37714.1| ribosome-associated GTPase EngA [Neisseria weaveri LMG 5135]
Length = 495
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/419 (52%), Positives = 302/419 (72%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALVA+ PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 11 MKPTIALVGRPNVGKSTLFNRLTKTKDALVADLPGLTRDRHYGHGRVGSKPYLVVDTGGF 70
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM K T QAI E+D ++F+VD R GL QDK+I + LR+S +P+ L +NK
Sbjct: 71 EPVVDSGILHEMAKHTLQAIDEADAVVFLVDCRTGLTPQDKIIADRLRQSSRPVFLAVNK 130
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ S +FYEL +G+P++IS +G+G+ +E++L + + ++ E H
Sbjct: 131 GEGANHAVLSAEFYELALGDPYVISGAHGDGVYYLIEDVLA---HFPEAVEEDEQPR-HP 186
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE + K + +IDTAG
Sbjct: 187 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERDGKPFTIIDTAG 242
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK +++I ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 243 VRRRGKVDEAVEKFSVIKAMQAIEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 302
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD+I +++ IK +I +KL FL FA F++ISA+K I +SI YD+++I +
Sbjct: 303 VNKWDNIDEDRKNQIKRDIARKLYFLDFAKFHYISALKERGIEGLFDSIQAAYDAAMIKM 362
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SA++ P R L+RPK+RYAHQGG NPP+IV+HGN L++I + Y RYL
Sbjct: 363 PTPKITRVLQSAVERQQPARAGLVRPKMRYAHQGGMNPPVIVVHGNSLQHISDAYTRYL 421
>gi|121634628|ref|YP_974873.1| GTP-binding protein EngA [Neisseria meningitidis FAM18]
gi|385324412|ref|YP_005878851.1| putative GTP-binding protein EngA [Neisseria meningitidis 8013]
gi|385339808|ref|YP_005893680.1| GTP-binding protein [Neisseria meningitidis G2136]
gi|385854979|ref|YP_005901492.1| GTP-binding protein [Neisseria meningitidis M01-240355]
gi|416205468|ref|ZP_11620559.1| GTP-binding protein [Neisseria meningitidis 961-5945]
gi|421542253|ref|ZP_15988363.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM255]
gi|421558880|ref|ZP_16004758.1| ribosome-associated GTPase EngA [Neisseria meningitidis 92045]
gi|433466987|ref|ZP_20424444.1| ribosome-associated GTPase EngA [Neisseria meningitidis 87255]
gi|433468993|ref|ZP_20426422.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98080]
gi|433494417|ref|ZP_20451487.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM762]
gi|433496601|ref|ZP_20453642.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7089]
gi|433498661|ref|ZP_20455670.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7124]
gi|433500629|ref|ZP_20457615.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM174]
gi|433536535|ref|ZP_20493043.1| ribosome-associated GTPase EngA [Neisseria meningitidis 77221]
gi|166225830|sp|A1KT93.1|DER_NEIMF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|120866334|emb|CAM10076.1| putative GTP-binding protein [Neisseria meningitidis FAM18]
gi|261392799|emb|CAX50375.1| putative GTP-binding protein EngA [Neisseria meningitidis 8013]
gi|325142105|gb|EGC64531.1| GTP-binding protein [Neisseria meningitidis 961-5945]
gi|325198052|gb|ADY93508.1| GTP-binding protein [Neisseria meningitidis G2136]
gi|325203920|gb|ADY99373.1| GTP-binding protein [Neisseria meningitidis M01-240355]
gi|402318189|gb|EJU53714.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM255]
gi|402337623|gb|EJU72871.1| ribosome-associated GTPase EngA [Neisseria meningitidis 92045]
gi|432203563|gb|ELK59614.1| ribosome-associated GTPase EngA [Neisseria meningitidis 87255]
gi|432205386|gb|ELK61416.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98080]
gi|432231091|gb|ELK86761.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM762]
gi|432234495|gb|ELK90115.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7124]
gi|432235301|gb|ELK90917.1| ribosome-associated GTPase EngA [Neisseria meningitidis M7089]
gi|432235920|gb|ELK91529.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM174]
gi|432274485|gb|ELL29573.1| ribosome-associated GTPase EngA [Neisseria meningitidis 77221]
Length = 485
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 300/420 (71%), Gaps = 11/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL T P + +E H
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILETFPEP-----EAEEADAKH 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTA
Sbjct: 176 PV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTA 231
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 232 GVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVV 291
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I
Sbjct: 292 AVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIK 351
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 352 MPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|304387839|ref|ZP_07370013.1| ribosome-associated GTPase EngA [Neisseria meningitidis ATCC 13091]
gi|304338104|gb|EFM04240.1| ribosome-associated GTPase EngA [Neisseria meningitidis ATCC 13091]
Length = 536
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 300/420 (71%), Gaps = 11/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL T P + +E H
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILETFPEP-----EAEEADAKH 226
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTA
Sbjct: 227 PV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTA 282
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 283 GVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVV 342
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I
Sbjct: 343 AVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIK 402
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 403 MPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 462
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 12/139 (8%)
Query: 171 KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
++ T SI +A+VG+PNVGKSTL N L + +D PG TRD + +K
Sbjct: 42 ERHLTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSK 101
Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVI-----KTLKSILEANVVILLLDAQQNISAQDINI 285
Y++IDT G FE + ++ +TL+++ EA+ V+ L+D + ++ QD I
Sbjct: 102 PYLVIDTGG-------FEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKII 154
Query: 286 ANFIYESGRSLIVCVNKWD 304
A+ + +S R + + VNK +
Sbjct: 155 ADRLRQSPRPVYLAVNKGE 173
>gi|161869787|ref|YP_001598955.1| GTP-binding protein EngA [Neisseria meningitidis 053442]
gi|161595340|gb|ABX73000.1| GTP-binding protein engA [Neisseria meningitidis 053442]
Length = 536
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 300/420 (71%), Gaps = 11/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL T P + +E H
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILETFPEP-----EAEEADAKH 226
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTA
Sbjct: 227 PV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTA 282
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 283 GVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVV 342
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I
Sbjct: 343 AVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIK 402
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 403 MPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 462
>gi|421548595|ref|ZP_15994620.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2781]
gi|402326256|gb|EJU61661.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2781]
Length = 485
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/419 (52%), Positives = 298/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E IL P + +E H
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEILE-NFPEPE---AEEADAKHP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|416172242|ref|ZP_11608722.1| GTP-binding protein [Neisseria meningitidis OX99.30304]
gi|325130014|gb|EGC52808.1| GTP-binding protein [Neisseria meningitidis OX99.30304]
Length = 485
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/419 (52%), Positives = 298/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E IL P + +E H
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEILE-NFPEPE---AEEADAKHP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|416188151|ref|ZP_11614620.1| GTP-binding protein [Neisseria meningitidis M0579]
gi|325135934|gb|EGC58544.1| GTP-binding protein [Neisseria meningitidis M0579]
Length = 536
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 300/420 (71%), Gaps = 11/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL T P + +E H
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILETFPEP-----EAEEADAKH 226
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTA
Sbjct: 227 PV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTA 282
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 283 GVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVV 342
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I
Sbjct: 343 AVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIK 402
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 403 MPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 462
>gi|329120372|ref|ZP_08249039.1| ribosome-associated GTPase EngA [Neisseria bacilliformis ATCC
BAA-1200]
gi|327462327|gb|EGF08653.1| ribosome-associated GTPase EngA [Neisseria bacilliformis ATCC
BAA-1200]
Length = 490
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/419 (52%), Positives = 295/419 (70%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT S+DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRSKDALVHDLPGLTRDRHYGHGRLGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VD R GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + + +FYEL +G P +IS +G+G+ + +E+IL F +E T
Sbjct: 121 GEGGRHDVLAAEFYELALGEPRVISGAHGDGVYHLIEDILD------SFPDAQEETATE- 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ +NV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEASNVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R IK +I +KL FL FA F+FISA+K I+ +SI YD+++I +
Sbjct: 293 VNKWDGISEERRNDIKRDIARKLYFLDFAKFHFISALKEKGIDGLFDSIQAAYDAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SA++ P R L+RPK+RYAHQGG NPP+IVIHGN L++I Y RYL
Sbjct: 353 PTPKITRVLQSAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVIHGNALQHISESYTRYL 411
>gi|33593199|ref|NP_880843.1| GTP-binding protein EngA [Bordetella pertussis Tohama I]
gi|33597408|ref|NP_885051.1| GTP-binding protein EngA [Bordetella parapertussis 12822]
gi|33602148|ref|NP_889708.1| GTP-binding protein EngA [Bordetella bronchiseptica RB50]
gi|384204496|ref|YP_005590235.1| GTP-binding protein EngA [Bordetella pertussis CS]
gi|408415647|ref|YP_006626354.1| GTP-binding protein [Bordetella pertussis 18323]
gi|410419768|ref|YP_006900217.1| GTP-binding protein [Bordetella bronchiseptica MO149]
gi|410473477|ref|YP_006896758.1| GTP-binding protein [Bordetella parapertussis Bpp5]
gi|427814227|ref|ZP_18981291.1| putative GTP-binding protein [Bordetella bronchiseptica 1289]
gi|427821304|ref|ZP_18988367.1| putative GTP-binding protein [Bordetella bronchiseptica D445]
gi|427821832|ref|ZP_18988894.1| putative GTP-binding protein [Bordetella bronchiseptica Bbr77]
gi|41017018|sp|Q7VWL4.1|DER_BORPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|41017021|sp|Q7W6Q0.1|DER_BORPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|41017022|sp|Q7WHN4.1|DER_BORBR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|33563574|emb|CAE42473.1| putative GTP-binding protein [Bordetella pertussis Tohama I]
gi|33573835|emb|CAE38143.1| putative GTP-binding protein [Bordetella parapertussis]
gi|33576586|emb|CAE33664.1| putative GTP-binding protein [Bordetella bronchiseptica RB50]
gi|332382610|gb|AEE67457.1| GTP-binding protein EngA [Bordetella pertussis CS]
gi|401777817|emb|CCJ63158.1| putative GTP-binding protein [Bordetella pertussis 18323]
gi|408443587|emb|CCJ50257.1| putative GTP-binding protein [Bordetella parapertussis Bpp5]
gi|408447063|emb|CCJ58735.1| putative GTP-binding protein [Bordetella bronchiseptica MO149]
gi|410565227|emb|CCN22780.1| putative GTP-binding protein [Bordetella bronchiseptica 1289]
gi|410572304|emb|CCN20576.1| putative GTP-binding protein [Bordetella bronchiseptica D445]
gi|410587097|emb|CCN02127.1| putative GTP-binding protein [Bordetella bronchiseptica Bbr77]
Length = 451
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/422 (53%), Positives = 307/422 (72%), Gaps = 7/422 (1%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G F++IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGDTPFLVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
P K GI+ EM +QT+QAI E+D+++F+VD R G+ D I LRKSGQ ++L +NK
Sbjct: 64 PVAKDGILAEMARQTRQAIAEADVVVFLVDARAGVNAHDHEIARLLRKSGQQRVLLAVNK 123
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNI 177
+E + + + DF+ELG+G PH ISA +G+GI + +E L+ + P + ++
Sbjct: 124 AEGMGVGNATGDFHELGLGEPHPISAAHGDGIVDLIEIALSGLVAPPADTGEQLEQDVVD 183
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
H I K+AIVG+PNVGKSTLIN+LLGE RVI +D PGTTRD+I+ FE + +KY LIDT
Sbjct: 184 HRI---KLAIVGRPNVGKSTLINTLLGEERVIAFDMPGTTRDAIEIDFERDGRKYTLIDT 240
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+R K FE IEKFSVIKTL++I +NVV+L++DAQ +S QD +IA F+ E+GR+++
Sbjct: 241 AGLRKRGKVFEAIEKFSVIKTLQAIEASNVVLLMIDAQAEVSEQDAHIAGFVLETGRAVV 300
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V +NKWD + +QR+ I+ ++KL FL FA + ISA+K + ++S+N + ++
Sbjct: 301 VAINKWDGLDSDQRERIEREFQRKLRFLGFARMHTISALKGQGVKPLLKSVNAAHAAAFA 360
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
LST R+TR L +A++ PP RK + RPK+RYAHQGG+NPP+IVIHGN L + + Y+RY
Sbjct: 361 KLSTPRLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLIVIHGNALDAVPDSYRRY 420
Query: 418 LE 419
LE
Sbjct: 421 LE 422
>gi|421557066|ref|ZP_16002975.1| ribosome-associated GTPase EngA [Neisseria meningitidis 80179]
gi|402335751|gb|EJU71015.1| ribosome-associated GTPase EngA [Neisseria meningitidis 80179]
Length = 485
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 299/420 (71%), Gaps = 11/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL T P + +E H
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILETFPEP-----EAEEADAKH 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ A++G+PNVGKSTL+N +LGE RVI +D GTTRDSI FE K + +IDTA
Sbjct: 176 PV----FAVIGRPNVGKSTLVNVILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTA 231
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 232 GVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVV 291
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I
Sbjct: 292 AVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIK 351
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 352 MPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|313668681|ref|YP_004048965.1| GTP-binding protein [Neisseria lactamica 020-06]
gi|313006143|emb|CBN87604.1| putative GTP-binding protein [Neisseria lactamica 020-06]
Length = 485
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/419 (52%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G PH+IS +G+G+ +E IL + F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL-------ENFPEPEAEEADA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K + I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKEHGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L +A++ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQTAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|385342155|ref|YP_005896026.1| GTP-binding protein [Neisseria meningitidis M01-240149]
gi|385851494|ref|YP_005898009.1| GTP-binding protein [Neisseria meningitidis M04-240196]
gi|385856998|ref|YP_005903510.1| GTP-binding protein [Neisseria meningitidis NZ-05/33]
gi|416162703|ref|ZP_11606805.1| GTP-binding protein [Neisseria meningitidis N1568]
gi|416183658|ref|ZP_11612671.1| GTP-binding protein [Neisseria meningitidis M13399]
gi|433473252|ref|ZP_20430616.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97021]
gi|433481802|ref|ZP_20439067.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2006087]
gi|433483787|ref|ZP_20441015.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2002038]
gi|433485987|ref|ZP_20443188.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97014]
gi|325127951|gb|EGC50852.1| GTP-binding protein [Neisseria meningitidis N1568]
gi|325134015|gb|EGC56670.1| GTP-binding protein [Neisseria meningitidis M13399]
gi|325202361|gb|ADY97815.1| GTP-binding protein [Neisseria meningitidis M01-240149]
gi|325206317|gb|ADZ01770.1| GTP-binding protein [Neisseria meningitidis M04-240196]
gi|325207887|gb|ADZ03339.1| GTP-binding protein [Neisseria meningitidis NZ-05/33]
gi|432210853|gb|ELK66809.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97021]
gi|432217633|gb|ELK73501.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2006087]
gi|432221490|gb|ELK77300.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2002038]
gi|432223033|gb|ELK78815.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97014]
Length = 485
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E IL + F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEVEEADA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|254804723|ref|YP_003082944.1| GTP-binding protein EngA [Neisseria meningitidis alpha14]
gi|416177695|ref|ZP_11610064.1| GTP-binding protein [Neisseria meningitidis M6190]
gi|416192597|ref|ZP_11616703.1| GTP-binding protein [Neisseria meningitidis ES14902]
gi|421544217|ref|ZP_15990295.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM140]
gi|421546327|ref|ZP_15992376.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM183]
gi|421552621|ref|ZP_15998595.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM576]
gi|421561020|ref|ZP_16006873.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2657]
gi|421567289|ref|ZP_16013025.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3001]
gi|433492340|ref|ZP_20449434.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM586]
gi|433502681|ref|ZP_20459646.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM126]
gi|254668265|emb|CBA05137.1| putative GTP-binding protein [Neisseria meningitidis alpha14]
gi|254673335|emb|CBA08527.1| putative GTP-binding protein [Neisseria meningitidis alpha275]
gi|325132265|gb|EGC54958.1| GTP-binding protein [Neisseria meningitidis M6190]
gi|325137764|gb|EGC60339.1| GTP-binding protein [Neisseria meningitidis ES14902]
gi|402324062|gb|EJU59500.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM183]
gi|402324329|gb|EJU59765.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM140]
gi|402331253|gb|EJU66594.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM576]
gi|402339500|gb|EJU74716.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2657]
gi|402344300|gb|EJU79441.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3001]
gi|432229129|gb|ELK84822.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM586]
gi|432240777|gb|ELK96308.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM126]
Length = 485
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 298/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E IL + F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEVEEADA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 KHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|296314652|ref|ZP_06864593.1| ribosome-associated GTPase EngA [Neisseria polysaccharea ATCC
43768]
gi|296838560|gb|EFH22498.1| ribosome-associated GTPase EngA [Neisseria polysaccharea ATCC
43768]
Length = 485
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/419 (52%), Positives = 295/419 (70%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G PH+IS +G+G+ +E+IL P +
Sbjct: 121 GEGGNRAVLAAEFYELALGEPHVISGAHGDGVYYLIEDILET-FPESE-------KEEEE 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 173 AKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I R+ IK +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEEHREQIKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|385328173|ref|YP_005882476.1| putative GTP-binding protein EngA [Neisseria meningitidis alpha710]
gi|308389025|gb|ADO31345.1| putative GTP-binding protein EngA [Neisseria meningitidis alpha710]
gi|389606059|emb|CCA44972.1| GTP-binding protein engA [Neisseria meningitidis alpha522]
Length = 485
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 298/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E IL + F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEVEEADA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 KHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERKGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|381401188|ref|ZP_09926102.1| GTP-binding protein Der [Kingella kingae PYKK081]
gi|380833803|gb|EIC13657.1| GTP-binding protein Der [Kingella kingae PYKK081]
Length = 489
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 297/419 (70%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTKTKDALVHDLPGLTRDRHYGHGKVGSKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D +IF+VD R GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQSPRPVFLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N + + +FYEL +G P++IS +G+G+ +E++L P +E N H
Sbjct: 121 GEGGNRPVLAAEFYELALGEPYVISGAHGDGVYYLIEDVLE-NFPDAS---DEEPENKHP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE +NK + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERDNKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L++
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVIA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA +FISA+K I+ +SI Y+++ I +
Sbjct: 293 VNKWDGISDERREQVKRDIARKLYFLDFAKLHFISALKEKGIDGLFDSIQAAYNAAFIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SA++ P R L+RPK+RYAHQGG NPP+IVIHGN L IG+ Y RYL
Sbjct: 353 PTPKITRVLQSAVERQQPPRAGLVRPKMRYAHQGGSNPPVIVIHGNSLHAIGDSYTRYL 411
>gi|404378735|ref|ZP_10983820.1| GTPase Der [Simonsiella muelleri ATCC 29453]
gi|404294960|gb|EFG31543.2| GTPase Der [Simonsiella muelleri ATCC 29453]
Length = 501
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/421 (52%), Positives = 297/421 (70%), Gaps = 13/421 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 13 MKPTIALVGRPNVGKSTLFNRLTKTKDALVHDLPGLTRDRHYGHGRVGSKPYLVVDTGGF 72
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D +IF+VD R GL QDK+I + LR+S +P+ L +NK
Sbjct: 73 EPVVDSGILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQSSRPVFLAVNK 132
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKF--FKKKEFTNI 177
E N I + +FYEL +G P++IS +G+G+ +E++L +KF ++ N
Sbjct: 133 GEGGNRPILAAEFYELALGEPYVISGAHGDGVYYLIEDVL------EKFPDTSDEQPENK 186
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
H + A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDT
Sbjct: 187 HPV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDT 242
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+R K E +EKFSVIK +++I ANV +L+LDAQQ+I+ QD IA F E+GR+L+
Sbjct: 243 AGVRKRGKVDEAVEKFSVIKAMQAIEAANVAVLVLDAQQDIADQDATIAGFALEAGRALV 302
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ VNKWD I +R IK +I +KL FL FA F++ISA+K I+ +SI YD++ I
Sbjct: 303 IAVNKWDGISEERRNDIKRDIARKLYFLDFAKFHYISALKEKGIDGLFDSIQAAYDAAFI 362
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IVIHGN L IG+ Y RY
Sbjct: 363 KMPTPKITRVLQSAIERQQPPRAGLMRPKMRYAHQGGMNPPVIVIHGNSLHAIGDSYTRY 422
Query: 418 L 418
L
Sbjct: 423 L 423
>gi|261379855|ref|ZP_05984428.1| ribosome-associated GTPase EngA [Neisseria subflava NJ9703]
gi|284797551|gb|EFC52898.1| ribosome-associated GTPase EngA [Neisseria subflava NJ9703]
Length = 485
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/419 (52%), Positives = 300/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILET-------FPEPEKEEEEA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F+ E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFVLEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|416213868|ref|ZP_11622561.1| GTP-binding protein [Neisseria meningitidis M01-240013]
gi|325144121|gb|EGC66428.1| GTP-binding protein [Neisseria meningitidis M01-240013]
Length = 536
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E IL + F + E +
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEVEEADA 224
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 225 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 283
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 284 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 343
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 344 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 403
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 404 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 462
>gi|254670450|emb|CBA06089.1| putative GTP-binding protein [Neisseria meningitidis alpha153]
Length = 536
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E IL + F + E +
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL-------ENFPEPEVEEADA 224
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 225 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 283
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 284 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 343
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 344 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 403
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 404 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 462
>gi|59800867|ref|YP_207579.1| GTP-binding protein EngA [Neisseria gonorrhoeae FA 1090]
gi|8134430|sp|O87407.1|DER_NEIG1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|3722226|gb|AAC63508.1| essential Gc protein [Neisseria gonorrhoeae]
gi|59717762|gb|AAW89167.1| putative GTP-binding protein [Neisseria gonorrhoeae FA 1090]
Length = 485
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/419 (52%), Positives = 296/419 (70%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + L+GRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K + +IDTGGF
Sbjct: 1 MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYFVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + ++ + +FYEL +G PH+IS +G+G+ +E IL P + +E H
Sbjct: 121 GEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEILE-NFPEPE---AEEADAKHP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L +A++ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQTAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|421563067|ref|ZP_16008889.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2795]
gi|421906633|ref|ZP_16336526.1| GTP-binding protein engA [Neisseria meningitidis alpha704]
gi|393292381|emb|CCI72468.1| GTP-binding protein engA [Neisseria meningitidis alpha704]
gi|402341774|gb|EJU76947.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM2795]
Length = 485
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/419 (52%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILET-------FPEPEKEEEEA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRSGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|268594476|ref|ZP_06128643.1| GTP-binding protein engA [Neisseria gonorrhoeae 35/02]
gi|268596471|ref|ZP_06130638.1| GTP-binding protein engA [Neisseria gonorrhoeae FA19]
gi|291044231|ref|ZP_06569940.1| GTP-binding protein engA [Neisseria gonorrhoeae DGI2]
gi|293399430|ref|ZP_06643583.1| ribosome-associated GTPase EngA [Neisseria gonorrhoeae F62]
gi|268547865|gb|EEZ43283.1| GTP-binding protein engA [Neisseria gonorrhoeae 35/02]
gi|268550259|gb|EEZ45278.1| GTP-binding protein engA [Neisseria gonorrhoeae FA19]
gi|291011125|gb|EFE03121.1| GTP-binding protein engA [Neisseria gonorrhoeae DGI2]
gi|291609999|gb|EFF39121.1| ribosome-associated GTPase EngA [Neisseria gonorrhoeae F62]
Length = 502
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/419 (52%), Positives = 295/419 (70%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + L+GRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K + +IDTGGF
Sbjct: 18 MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYFVIDTGGF 77
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 78 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 137
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + ++ + +FYEL +G PH+IS +G+G+ +E IL P + +E H
Sbjct: 138 GEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEILE-NFPEPE---AEEADAKHP 193
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 194 V----FAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 249
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 250 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 309
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 310 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 369
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L +A+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 370 PTPKITRVLQTAVGRQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 428
>gi|325265768|ref|ZP_08132455.1| ribosome-associated GTPase EngA [Kingella denitrificans ATCC 33394]
gi|324982751|gb|EGC18376.1| ribosome-associated GTPase EngA [Kingella denitrificans ATCC 33394]
Length = 489
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 294/419 (70%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM +QT QAI E+D +IF+VD R GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMARQTLQAIDEADAVIFLVDARTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + + +FYEL +G PH+IS +G+G+ +E +L P + +++ N H
Sbjct: 121 GEGGRRDVLAAEFYELALGEPHVISGAHGDGVYYLMEEVLE-NFPEAE---EEQPENKHP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L++
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVIA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R IK +I +KL FL FA F++ISA+K I+ +SI YD++ I +
Sbjct: 293 VNKWDGISEERRNDIKRDIARKLYFLDFAKFHYISALKERGIDGLFDSIQAAYDAAFIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IVIHGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQAPPRAGLVRPKMRYAHQGGMNPPVIVIHGNSLSAISDSYTRYL 411
>gi|254493337|ref|ZP_05106508.1| GTP-binding protein engA [Neisseria gonorrhoeae 1291]
gi|268598604|ref|ZP_06132771.1| GTP-binding protein engA [Neisseria gonorrhoeae MS11]
gi|268600957|ref|ZP_06135124.1| GTP-binding protein engA [Neisseria gonorrhoeae PID18]
gi|268603264|ref|ZP_06137431.1| GTP-binding protein engA [Neisseria gonorrhoeae PID1]
gi|268681744|ref|ZP_06148606.1| GTP-binding protein engA [Neisseria gonorrhoeae PID332]
gi|268683971|ref|ZP_06150833.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-92-679]
gi|268686216|ref|ZP_06153078.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-93-1035]
gi|226512377|gb|EEH61722.1| GTP-binding protein engA [Neisseria gonorrhoeae 1291]
gi|268582735|gb|EEZ47411.1| GTP-binding protein engA [Neisseria gonorrhoeae MS11]
gi|268585088|gb|EEZ49764.1| GTP-binding protein engA [Neisseria gonorrhoeae PID18]
gi|268587395|gb|EEZ52071.1| GTP-binding protein engA [Neisseria gonorrhoeae PID1]
gi|268622028|gb|EEZ54428.1| GTP-binding protein engA [Neisseria gonorrhoeae PID332]
gi|268624255|gb|EEZ56655.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-92-679]
gi|268626500|gb|EEZ58900.1| GTP-binding protein engA [Neisseria gonorrhoeae SK-93-1035]
Length = 500
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/419 (52%), Positives = 295/419 (70%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + L+GRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K + +IDTGGF
Sbjct: 16 MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYFVIDTGGF 75
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 76 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 135
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + ++ + +FYEL +G PH+IS +G+G+ +E IL P + +E H
Sbjct: 136 GEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEILE-NFPEPE---AEEADAKHP 191
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 192 V----FAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 247
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 248 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 307
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 308 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 367
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L +A+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 368 PTPKITRVLQTAVGRQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 426
>gi|269214116|ref|ZP_05983629.2| ribosome-associated GTPase EngA [Neisseria cinerea ATCC 14685]
gi|269144512|gb|EEZ70930.1| ribosome-associated GTPase EngA [Neisseria cinerea ATCC 14685]
Length = 537
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 300/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 53 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 112
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 113 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 172
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL +K ++ + H
Sbjct: 173 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILEKFPEPEKEEEEAK----HP 228
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 229 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 284
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+++ QD IA F E+GR+L+V
Sbjct: 285 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDVADQDATIAGFALEAGRALVVA 344
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 345 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 404
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 405 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 463
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 174 FTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
T SI +A+VG+PNVGKSTL N L + +D PG TRD + +K Y+
Sbjct: 46 LTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYL 105
Query: 234 LIDTAGIRRRNKTFEVIEKFSVI-----KTLKSILEANVVILLLDAQQNISAQDINIANF 288
+IDT G FE + ++ +TL+++ EA+ V+ L+D + ++ QD IA+
Sbjct: 106 VIDTGG-------FEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADR 158
Query: 289 IYESGRSLIVCVNKWD 304
+ +S R + + VNK +
Sbjct: 159 LRQSPRPVYLAVNKGE 174
>gi|225077176|ref|ZP_03720375.1| hypothetical protein NEIFLAOT_02231 [Neisseria flavescens
NRL30031/H210]
gi|224951524|gb|EEG32733.1| hypothetical protein NEIFLAOT_02231 [Neisseria flavescens
NRL30031/H210]
Length = 486
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/419 (52%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 2 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 61
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 62 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 121
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL + F + E +
Sbjct: 122 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEAA 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 175 KHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 234 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 294 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 354 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 412
>gi|319637814|ref|ZP_07992580.1| GTP-binding protein engA [Neisseria mucosa C102]
gi|317400969|gb|EFV81624.1| GTP-binding protein engA [Neisseria mucosa C102]
Length = 485
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/419 (52%), Positives = 301/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILET-------FPEPEKEEEEA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE + K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERDGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K +V+EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDKVVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|194098169|ref|YP_002001217.1| GTP-binding protein EngA [Neisseria gonorrhoeae NCCP11945]
gi|240013743|ref|ZP_04720656.1| GTP-binding protein EngA [Neisseria gonorrhoeae DGI18]
gi|240016181|ref|ZP_04722721.1| GTP-binding protein EngA [Neisseria gonorrhoeae FA6140]
gi|240120813|ref|ZP_04733775.1| GTP-binding protein EngA [Neisseria gonorrhoeae PID24-1]
gi|385335350|ref|YP_005889297.1| GTP-binding protein EngA [Neisseria gonorrhoeae TCDC-NG08107]
gi|238690187|sp|B4RKD2.1|DER_NEIG2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|193933459|gb|ACF29283.1| essential Gc protein [Neisseria gonorrhoeae NCCP11945]
gi|317163893|gb|ADV07434.1| GTP-binding protein EngA [Neisseria gonorrhoeae TCDC-NG08107]
Length = 485
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/419 (52%), Positives = 295/419 (70%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + L+GRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K + +IDTGGF
Sbjct: 1 MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYFVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + ++ + +FYEL +G PH+IS +G+G+ +E IL P + +E H
Sbjct: 121 GEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEILE-NFPEPE---AEEADAKHP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L +A+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQTAVGRQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|319794354|ref|YP_004155994.1| ribosome-associated GTPase enga [Variovorax paradoxus EPS]
gi|315596817|gb|ADU37883.1| ribosome-associated GTPase EngA [Variovorax paradoxus EPS]
Length = 447
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 300/420 (71%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA+Y GLTRDRHYG G +GK FI+IDTGGF
Sbjct: 1 MKPVVALVGRPNVGKSTLFNRLTQTRDAIVADYAGLTRDRHYGNGRLGKHEFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R+GL QD I N LR+ G+P VL NK
Sbjct: 61 EPDAGSGIYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLGKPCVLAANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E ++ L DFYELG G+ H +SA +G G+++ +E L +E P E
Sbjct: 121 AEGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVE--LALE-PLNLPDPDDETDEDDV 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +++ LIDTAG
Sbjct: 178 NKPIKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQRFELIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 238 LRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVIA 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ QR+ I+ I+ +L FL FA +FISAIK + ++I + S+ +
Sbjct: 298 INKWDAVDSYQREQIQRQIETRLPFLKFASLHFISAIKRQGLGPVWQAIAQAHKSATRKM 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST +TR L+ A++ P R + RPKLRYAHQGG NPP+I+IHGN L+++ + YKR+LE
Sbjct: 358 STPVLTRLLLEAVQFQAPQRGGMFRPKLRYAHQGGMNPPVIIIHGNSLEHVTDAYKRFLE 417
>gi|365093278|ref|ZP_09330344.1| GTP-binding protein Der [Acidovorax sp. NO-1]
gi|363414452|gb|EHL21601.1| GTP-binding protein Der [Acidovorax sp. NO-1]
Length = 447
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/421 (52%), Positives = 304/421 (72%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R G+ QD I N+LR+ G+P VLV NK
Sbjct: 61 EPDASTGIYKEMAKQTQQAVAEADVVIFVVDARAGVSAQDHDIANYLRRLGKPCVLVANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E + + L +FYELG+G+ + +SA +G GI++ +E L ++LP E +
Sbjct: 121 AEGMLEGVQLAEFYELGLGDVYPVSAAHGQGIRSLVEIALEPLQLPDPD---DSEVESDK 177
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
SI IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +++ L+DTA
Sbjct: 178 SI--IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR+++V
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVV 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR++++ +I+ +L FL FA +FISA K + SI + ++
Sbjct: 296 AVNKWDAVDDYQRQLLERSIETRLAFLKFASLHFISAKKRQGLGPLWASIAQAHKAATCK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST +TR L+ A++ P R + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MSTPVLTRLLLEAVQFQSPKRAGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|333375652|ref|ZP_08467458.1| ribosome-associated GTPase EngA [Kingella kingae ATCC 23330]
gi|332969954|gb|EGK08954.1| ribosome-associated GTPase EngA [Kingella kingae ATCC 23330]
Length = 489
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/419 (52%), Positives = 296/419 (70%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG +G K ++++DTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTKTKDALVHDLPGLTRDRHYGHAKVGSKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D +IF+VD R GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVIFLVDARTGLTPQDKIIADRLRQSPRPVFLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N + + +FYEL +G P++IS +G+G+ +E++L P +E N H
Sbjct: 121 GEGGNRPVLAAEFYELALGEPYVISGAHGDGVYYLIEDVLE-NFPDAS---DEEPENKHP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE +NK + +IDTAG
Sbjct: 177 V----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFERDNKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L++
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVIA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA +FISA+K I+ +SI Y+++ I +
Sbjct: 293 VNKWDGISDERREQVKRDIARKLYFLDFAKLHFISALKEKGIDGLFDSIQAAYNAAFIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SA++ P R L+RPK+RYAHQGG NPP+IVIHGN L IG+ Y RYL
Sbjct: 353 PTPKITRVLQSAVERQQPPRAGLVRPKMRYAHQGGSNPPVIVIHGNSLHAIGDSYTRYL 411
>gi|218767960|ref|YP_002342472.1| GTP-binding protein EngA [Neisseria meningitidis Z2491]
gi|421550399|ref|ZP_15996404.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69166]
gi|433471007|ref|ZP_20428398.1| ribosome-associated GTPase EngA [Neisseria meningitidis 68094]
gi|433475455|ref|ZP_20432796.1| ribosome-associated GTPase EngA [Neisseria meningitidis 88050]
gi|433477334|ref|ZP_20434657.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70012]
gi|433479360|ref|ZP_20436654.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63041]
gi|433513205|ref|ZP_20469999.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63049]
gi|433515350|ref|ZP_20472122.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2004090]
gi|433517351|ref|ZP_20474100.1| ribosome-associated GTPase EngA [Neisseria meningitidis 96023]
gi|433519572|ref|ZP_20476293.1| ribosome-associated GTPase EngA [Neisseria meningitidis 65014]
gi|433521676|ref|ZP_20478371.1| ribosome-associated GTPase EngA [Neisseria meningitidis 61103]
gi|433523737|ref|ZP_20480402.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97020]
gi|433525877|ref|ZP_20482511.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69096]
gi|433527961|ref|ZP_20484572.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3652]
gi|433530135|ref|ZP_20486728.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3642]
gi|433532392|ref|ZP_20488958.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2007056]
gi|433533995|ref|ZP_20490540.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2001212]
gi|433538726|ref|ZP_20495206.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70030]
gi|433540705|ref|ZP_20497160.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63006]
gi|26006740|sp|Q9JV01.1|DER_NEIMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|121051968|emb|CAM08277.1| putative GTP-binding protein [Neisseria meningitidis Z2491]
gi|402330614|gb|EJU65961.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69166]
gi|432209496|gb|ELK65463.1| ribosome-associated GTPase EngA [Neisseria meningitidis 68094]
gi|432211273|gb|ELK67228.1| ribosome-associated GTPase EngA [Neisseria meningitidis 88050]
gi|432216556|gb|ELK72437.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70012]
gi|432217163|gb|ELK73032.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63041]
gi|432248882|gb|ELL04306.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63049]
gi|432253938|gb|ELL09274.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2004090]
gi|432254360|gb|ELL09695.1| ribosome-associated GTPase EngA [Neisseria meningitidis 96023]
gi|432255563|gb|ELL10892.1| ribosome-associated GTPase EngA [Neisseria meningitidis 65014]
gi|432260449|gb|ELL15708.1| ribosome-associated GTPase EngA [Neisseria meningitidis 61103]
gi|432260636|gb|ELL15894.1| ribosome-associated GTPase EngA [Neisseria meningitidis 97020]
gi|432262068|gb|ELL17313.1| ribosome-associated GTPase EngA [Neisseria meningitidis 69096]
gi|432266268|gb|ELL21456.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3652]
gi|432268063|gb|ELL23235.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3642]
gi|432268337|gb|ELL23508.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2007056]
gi|432272505|gb|ELL27612.1| ribosome-associated GTPase EngA [Neisseria meningitidis 2001212]
gi|432274734|gb|ELL29821.1| ribosome-associated GTPase EngA [Neisseria meningitidis 70030]
gi|432277720|gb|ELL32766.1| ribosome-associated GTPase EngA [Neisseria meningitidis 63006]
Length = 485
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 300/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL + F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|421565128|ref|ZP_16010914.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3081]
gi|402345457|gb|EJU80574.1| ribosome-associated GTPase EngA [Neisseria meningitidis NM3081]
Length = 485
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILET-------FPEPEKEEEEA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|421863088|ref|ZP_16294789.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379417|emb|CBX21984.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 485
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/419 (52%), Positives = 300/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL + F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L +A++ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQTAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|418288058|ref|ZP_12900578.1| GTP-binding protein [Neisseria meningitidis NM233]
gi|418290324|ref|ZP_12902487.1| GTP-binding protein [Neisseria meningitidis NM220]
gi|372201766|gb|EHP15649.1| GTP-binding protein [Neisseria meningitidis NM220]
gi|372202661|gb|EHP16442.1| GTP-binding protein [Neisseria meningitidis NM233]
Length = 536
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 300/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL + F + E +
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 224
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 225 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 283
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 284 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 343
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 344 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 403
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 404 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 462
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 12/139 (8%)
Query: 171 KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
++ T SI +A+VG+PNVGKSTL N L + +D PG TRD + +K
Sbjct: 42 ERHLTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSK 101
Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVI-----KTLKSILEANVVILLLDAQQNISAQDINI 285
Y++IDT G FE + ++ +TL+++ EA+ V+ L+D + ++ QD I
Sbjct: 102 PYLVIDTGG-------FEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKII 154
Query: 286 ANFIYESGRSLIVCVNKWD 304
A+ + +S R + + VNK +
Sbjct: 155 ADRLRQSPRPVYLAVNKGE 173
>gi|34498989|ref|NP_903204.1| GTP-binding protein EngA [Chromobacterium violaceum ATCC 12472]
gi|41017007|sp|Q7NS92.1|DER_CHRVO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|34104839|gb|AAQ61196.1| probable GTP-binding protein [Chromobacterium violaceum ATCC 12472]
Length = 469
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/420 (52%), Positives = 303/420 (72%), Gaps = 10/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG+G +G+K ++++DTGGF
Sbjct: 1 MKPTVALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGQGRVGEKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V +GI+ EM KQT QA+ E+D ++F+VDGR GL QDK+I N LR+ +P+ L +NK
Sbjct: 61 EPVVDEGILFEMAKQTLQAVDEADAVVFLVDGRAGLTPQDKIIANRLRQLDRPVFLAVNK 120
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + +I+ +F+EL +G P +ISA +G+G++ +E +L + F + E +
Sbjct: 121 AEGMKHAIAGAEFHELALGEPLVISAAHGDGVRELMELVL------EGFPDEVEEEDSR- 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ K A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE Y +IDTAG
Sbjct: 174 --HPKFAVIGRPNVGKSTLVNAILGEERVIAFDQAGTTRDSIYIDFEREGHTYTIIDTAG 231
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E++EKFSVIKT+K+I +ANV +L+LDAQ +IS QD IA F E+GR+L+V
Sbjct: 232 VRRRAKVNEMLEKFSVIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAGRALVVA 291
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD++ Q++ ++ I +KLNFL FA F++ISAI+ + +SI+ Y +++ L
Sbjct: 292 VNKWDNLDGEQKENVRREIARKLNFLDFAKFHYISAIEGRGVADLFKSIDEAYRAAMSKL 351
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T ++TR L A++ P R LIRPK+RYAHQGG+NPP+IV+HGN L I Y RYLE
Sbjct: 352 ATPKLTRVLQVALERQQPPRSGLIRPKMRYAHQGGQNPPVIVVHGNALDSIPASYTRYLE 411
>gi|385337795|ref|YP_005891668.1| GTP-binding protein engA [Neisseria meningitidis WUE 2594]
gi|319410209|emb|CBY90548.1| GTP-binding protein engA [Neisseria meningitidis WUE 2594]
Length = 536
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/419 (52%), Positives = 300/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 52 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 111
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 112 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 171
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL + F + E +
Sbjct: 172 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEEA 224
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 225 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 283
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 284 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 343
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 344 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 403
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 404 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 462
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 12/139 (8%)
Query: 171 KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
++ T SI +A+VG+PNVGKSTL N L + +D PG TRD + +K
Sbjct: 42 ERHLTQKDSIMKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSK 101
Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVI-----KTLKSILEANVVILLLDAQQNISAQDINI 285
Y++IDT G FE + ++ +TL+++ EA+ V+ L+D + ++ QD I
Sbjct: 102 PYLVIDTGG-------FEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKII 154
Query: 286 ANFIYESGRSLIVCVNKWD 304
A+ + +S R + + VNK +
Sbjct: 155 ADRLRQSPRPVYLAVNKGE 173
>gi|241758625|ref|ZP_04756739.1| ribosome-associated GTPase EngA [Neisseria flavescens SK114]
gi|241321136|gb|EER57332.1| ribosome-associated GTPase EngA [Neisseria flavescens SK114]
Length = 485
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/419 (52%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G IG K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKIGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDILET-------FPEPEKEEEEA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI ++ GTTRDSI FE K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFNMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ ESI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGIDGLFESIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L SAI+ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|421554603|ref|ZP_16000544.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98008]
gi|402332563|gb|EJU67888.1| ribosome-associated GTPase EngA [Neisseria meningitidis 98008]
Length = 485
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 216/419 (51%), Positives = 300/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL + F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGTHGDGVYYLIEDIL-------ETFPEPEKEEEEA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 -KHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+++ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDVADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L +A++ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQTAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|398807433|ref|ZP_10566311.1| ribosome-associated GTPase EngA [Variovorax sp. CF313]
gi|398089443|gb|EJL79959.1| ribosome-associated GTPase EngA [Variovorax sp. CF313]
Length = 447
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/420 (52%), Positives = 300/420 (71%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA++ GLTRDRHYG G +GK FI+IDTGGF
Sbjct: 1 MKPVVALVGRPNVGKSTLFNRLTQTRDAIVADFAGLTRDRHYGNGRLGKHEFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R+GL QD I N LR+ G+P VL NK
Sbjct: 61 EPDAGSGIYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLGKPCVLAANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E ++ L DFYELG G+ H +SA +G G+++ +E L +E P E
Sbjct: 121 AEGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVE--LALE-PLNLPDPDDEADEDEV 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +++ LIDTAG
Sbjct: 178 NKPIKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQRFELIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ + FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 238 LRRKGRVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVIA 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ QR+ I+ I+ +L FL FA +FISAIK + ++I + S+ +
Sbjct: 298 INKWDAVDSYQREQIQRQIETRLPFLKFAALHFISAIKRQGLGPVWQAIAQAHKSATRKM 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST +TR L+ A++ P R + RPKLRYAHQGG NPP+IVIHGN L+++ + YKR+LE
Sbjct: 358 STPVLTRLLLEAVQFQAPKRGGMYRPKLRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFLE 417
>gi|261400171|ref|ZP_05986296.1| ribosome-associated GTPase EngA [Neisseria lactamica ATCC 23970]
gi|269210170|gb|EEZ76625.1| ribosome-associated GTPase EngA [Neisseria lactamica ATCC 23970]
Length = 485
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/419 (51%), Positives = 299/419 (71%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K +++IDTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VDGR GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E N ++ + +FYEL +G+P++IS +G+G+ +E+IL + F + E +
Sbjct: 121 GEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL-------ETFPEPEKEEEAA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDTAG
Sbjct: 174 KHPV-FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSVIK ++++ ANV +L+LDAQQ+I+ QD IA F E+GR+L+V
Sbjct: 233 VRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDATIAGFALEAGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD I +R+ +K +I +KL FL FA F+FISA+K I+ +SI Y++++I +
Sbjct: 293 VNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGIDGLFDSIQAAYNAAMIKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +ITR L +A++ P R L+RPK+RYAHQGG NPP+IV+HGN L I + Y RYL
Sbjct: 353 PTPKITRVLQTAVERQQPPRAGLVRPKMRYAHQGGMNPPVIVVHGNSLHAISDSYTRYL 411
>gi|332284650|ref|YP_004416561.1| GTP-binding protein [Pusillimonas sp. T7-7]
gi|330428603|gb|AEC19937.1| GTP-binding protein [Pusillimonas sp. T7-7]
Length = 478
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/443 (51%), Positives = 306/443 (69%), Gaps = 25/443 (5%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGR NVGKSTLFNR+T SR ALVA++ GLTRDRHYGEG +G+ FI +DTGGFE
Sbjct: 7 KPVVALVGRANVGKSTLFNRITRSRAALVADFSGLTRDRHYGEGRVGEHPFIAVDTGGFE 66
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P K GI+ EM +QT+QAI ESD++IF+VD R G+ D I LRKSGQ + L +NK+
Sbjct: 67 PVAKDGILLEMARQTQQAIAESDVVIFLVDARAGVNAHDHEIARLLRKSGQRVFLAVNKA 126
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTI--ELPYKKFFKKKEF---- 174
E + S + +F+ELG+G PH ISA +G+G+ +E L+ +LP + +F
Sbjct: 127 EGMRYGSATAEFHELGLGEPHAISASHGDGVVELIERALSYMDDLPDAGTDDEPDFMPDD 186
Query: 175 --------------TNIHSIE----YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGT 216
TN E IK+AIVG+PNVGKSTLIN+LLGE+RVI +D PGT
Sbjct: 187 AEPVLADGDLAEQDTNQEPEEPVSHRIKLAIVGRPNVGKSTLINTLLGEDRVIAFDMPGT 246
Query: 217 TRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
TRD+I+ FE N Y LIDTAG+RRR K FE IEKFSVIKTL++I NVV+L+LDAQ
Sbjct: 247 TRDAIEIEFERNGVSYTLIDTAGLRRRGKVFEAIEKFSVIKTLQAIEACNVVVLMLDAQT 306
Query: 277 NISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAI 336
IS QD +IA F+ E+GR+L+V +NKWD + QR+ I+ + +KL+FLSFA + +SA+
Sbjct: 307 EISDQDAHIAGFVLETGRALVVAINKWDGLDSEQRERIQRDFDRKLHFLSFAKMHTVSAL 366
Query: 337 KLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKN 396
K +N ++S+N + ++ LST ++TR L +A++ P RK + RPK+RYAHQGG+N
Sbjct: 367 KGQGVNVLIKSVNAAHAAAFAKLSTPKLTRVLHAAVEQQQPPRKGIFRPKMRYAHQGGQN 426
Query: 397 PPIIVIHGNRLKYIGNDYKRYLE 419
PP+I+IHGN + I + Y+RYLE
Sbjct: 427 PPLIIIHGNAIDAISDSYRRYLE 449
>gi|239815182|ref|YP_002944092.1| GTP-binding protein EngA [Variovorax paradoxus S110]
gi|259645888|sp|C5CXH0.1|DER_VARPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|239801759|gb|ACS18826.1| small GTP-binding protein [Variovorax paradoxus S110]
Length = 447
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/420 (51%), Positives = 297/420 (70%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA++ GLTRDRHYG G +GK FI+IDTGGF
Sbjct: 1 MKPVVALVGRPNVGKSTLFNRLTQTRDAIVADFAGLTRDRHYGNGRLGKHEFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R+GL QD I N LR+ G+P VL NK
Sbjct: 61 EPDAGSGIYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLGKPCVLAANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E ++ L DFYELG G+ H +SA +G G+++ +E L P E
Sbjct: 121 AEGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVELALA---PLNLPDPDDEADEDDV 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +++ LIDTAG
Sbjct: 178 NKPIKLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFERNGQRFELIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K FE IEKFSV+KTL++I A+VV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 238 LRRKGKVFEAIEKFSVVKTLQAIESASVVLLLLDATQGVTDQDAHIAGYILESGRAVVIA 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ QR+ I+ I+ +L FL FA +FISAIK + ++I + S+ +
Sbjct: 298 INKWDAVDSYQREQIQRQIETRLPFLKFASLHFISAIKRQGLGPVWQAIAQAHKSATRKM 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST +TR L+ A++ P R + RPKLRYAHQGG NPP+I+IHGN L+++ YKR+LE
Sbjct: 358 STPVLTRLLLEAVQFQSPKRAGMFRPKLRYAHQGGMNPPVIIIHGNSLEHVTEAYKRFLE 417
>gi|253996245|ref|YP_003048309.1| GTP-binding protein EngA [Methylotenera mobilis JLW8]
gi|253982924|gb|ACT47782.1| small GTP-binding protein [Methylotenera mobilis JLW8]
Length = 484
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/420 (52%), Positives = 299/420 (71%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P +VLVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDRHYG G + ++++DTGGF
Sbjct: 1 MIPTIVLVGRPNVGKSTLFNRLTKTRDALVADLPGLTRDRHYGRGIGASQPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP GI+ M KQT QAI E+D IIF+VDGRQG+ QD I N LR+S P++L +NK
Sbjct: 61 EPHTDSGILKAMAKQTLQAIDEADAIIFLVDGRQGVSPQDMEIANRLRRSKCPVLLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++ S DF+ELG+G P IS+ +G G+++ +E + L K + + T+
Sbjct: 121 TEGMQKAVVSADFHELGLGYPLSISSAHGEGVRDIVE----LALENFKEVEDEPVTDYTG 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
KVAIVG+PNVGKSTL+N+LLGE RVI YD PGTTRDSI E N K Y LIDTAG
Sbjct: 177 DRIPKVAIVGRPNVGKSTLVNALLGEERVIAYDEPGTTRDSIHIDLEKNGKHYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R + FE IEKFSVIKT+++I EANVVIL++DAQ+ I+ QD ++A +I ++GR+L+V
Sbjct: 237 VRKRGRVFEAIEKFSVIKTIQAIEEANVVILVVDAQEGITEQDAHVAAYILDAGRALVVA 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++R IK I +KL FL FA F++ISA++ + +S++ Y ++ L
Sbjct: 297 INKWDGLKEDERDWIKREIDRKLQFLDFAEFHYISALRKKGLPELFKSVDVAYKAAFAKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T ++TR LI A++ H P K IRPKLRYAHQGG NPPI+VIHG+ + + + Y R+LE
Sbjct: 357 ATPQLTRVLIDALQQHQPPISKGIRPKLRYAHQGGSNPPIVVIHGSHVDGVKDAYTRFLE 416
>gi|393757568|ref|ZP_10346392.1| GTP-binding protein Der [Alcaligenes faecalis subsp. faecalis NCIB
8687]
gi|393165260|gb|EJC65309.1| GTP-binding protein Der [Alcaligenes faecalis subsp. faecalis NCIB
8687]
Length = 452
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/423 (52%), Positives = 304/423 (71%), Gaps = 11/423 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGR NVGKSTLFNRLT SR ALVAN+PGLTRDRHYGEG +G + +I++DTGGFE
Sbjct: 7 KPVVALVGRANVGKSTLFNRLTRSRAALVANFPGLTRDRHYGEGRVGSRPYIVVDTGGFE 66
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P K G++ EM +QT+QAI E+D+++F+VD R+G+ D I LRK GQ ++L +NK+
Sbjct: 67 PVAKTGMLLEMARQTQQAIAEADVVVFLVDAREGVNALDLEIAQLLRKLGQKVLLAVNKA 126
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNF----LENILTIELPYKKFFKKKEFTN 176
E + + ++F+ELG+G P++ISA +G+G++ LE + + E P + ++F +
Sbjct: 127 EGMRYEAGGVEFHELGLGQPYLISASHGDGVEELINLALEQVPSPE-PDQDGQDDEQFQH 185
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+ FE N +Y LID
Sbjct: 186 -----RIKLAIVGRPNVGKSTLINTLVGEERVIAFDQPGTTRDAIEIEFERNGVEYTLID 240
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K FE +EKFSVIKTL++I NVV+L++DA IS QD +IA F+ E+GR+L
Sbjct: 241 TAGLRKRGKVFEAVEKFSVIKTLQAIEACNVVLLMIDAHTEISDQDASIAGFVVETGRAL 300
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+V +NKWD + QR+ IK +KL FL+FA + +SA+K IN ++S+N + ++
Sbjct: 301 VVGINKWDGLDEYQREWIKREFDRKLRFLNFAKMHTLSALKGQGINPLLKSVNEAHAAAF 360
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
LST ++TR + A++ P RK + RPKLRYAHQGG NPPI+VIHGN L I + Y+R
Sbjct: 361 SKLSTPKLTRVMQEAVEQQQPPRKGIFRPKLRYAHQGGMNPPIVVIHGNALDAISDSYRR 420
Query: 417 YLE 419
YLE
Sbjct: 421 YLE 423
>gi|171463406|ref|YP_001797519.1| GTP-binding protein EngA [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|238689056|sp|B1XU78.1|DER_POLNS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|171192944|gb|ACB43905.1| small GTP-binding protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 454
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/423 (53%), Positives = 305/423 (72%), Gaps = 10/423 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGR NVGKSTLFNRLT SRDALVA++ GLTRDRHYG+ IG+++FI +DTGGF
Sbjct: 1 MNPVITIVGRSNVGKSTLFNRLTRSRDALVADFSGLTRDRHYGKCRIGERAFICVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GI+ EM KQTKQ + ESDI+IF+VDGR G+ QD++I +FLRK+G+P++L +NK
Sbjct: 61 EPVAKTGIVAEMAKQTKQVVAESDIVIFLVDGRLGMAPQDRVIADFLRKTGRPVILAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILT---IELPYKKFFKKKEFTN 176
+E + +S+ + DF+ELG+G P IS+ +G+G++ +++ L + P + E N
Sbjct: 121 TEGMQASVVTADFHELGLGEPFPISSAHGDGVRGLIDDALDSLGVAEP-----DEDELVN 175
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ +K+A+VG+PNVGKSTLIN L+GE RVI +D PGTTRD+I+ FE N K YIL+D
Sbjct: 176 DPN-RPMKIAVVGRPNVGKSTLINKLIGEERVIAFDMPGTTRDAIEVPFERNGKPYILVD 234
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RRR K FE IEKFSV+KTL++I + NVVIL+LDAQQ+IS QD +IA FI E+GR+L
Sbjct: 235 TAGLRRRGKVFEAIEKFSVVKTLQAIADCNVVILMLDAQQDISEQDAHIAGFIVEAGRAL 294
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+V VNKWD I ++ + I +KL FL FA + ISA K + + ++ Y +++
Sbjct: 295 VVAVNKWDGIDTYVKERARLEIAQKLRFLDFANVHPISAKKGTGLKDLFKDVDAAYAAAM 354
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
L R+TR L AI++ P R + RPKLRYAHQGG NPPI+VIHG L + + YKR
Sbjct: 355 AKLPAPRLTRILQEAIEHQQPKRVGMGRPKLRYAHQGGMNPPIVVIHGTSLSGVTDSYKR 414
Query: 417 YLE 419
YLE
Sbjct: 415 YLE 417
>gi|238021706|ref|ZP_04602132.1| hypothetical protein GCWU000324_01609 [Kingella oralis ATCC 51147]
gi|237866320|gb|EEP67362.1| hypothetical protein GCWU000324_01609 [Kingella oralis ATCC 51147]
Length = 489
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/421 (51%), Positives = 293/421 (69%), Gaps = 13/421 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + LVGRPNVGKSTLFNRLT ++DALV + PGLTRDRHYG G +G K ++++DTGGF
Sbjct: 1 MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGHGKVGSKPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+HEM KQT QA+ E+D ++F+VD R GL QDK+I + LR+S +P+ L +NK
Sbjct: 61 EPVVDSGILHEMAKQTLQAVDEADAVVFLVDARTGLTPQDKIIADRLRQSPRPVYLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFT--NI 177
E + + +FYEL +G PH+IS +G+G+ +E IL + F E N
Sbjct: 121 GEGGRRDVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL------ENFPDADETQPENK 174
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
H + A++G+PNVGKSTL+N++LGE RVI +D GTTRDSI FE K + +IDT
Sbjct: 175 HPV----FAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDFEREGKPFTIIDT 230
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR K E +EKFSVIK +++I AN+ +L+LDAQQ+I+ QD IA F E+GR+L+
Sbjct: 231 AGVRRRGKVDEAVEKFSVIKAMQAIEAANIAVLVLDAQQDIADQDATIAGFALEAGRALV 290
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ VNKWD I +R IK +I +KL FL FA F++ISA+K I+ +SI Y+++ I
Sbjct: 291 IAVNKWDGISEERRNDIKRDIARKLYFLDFAKFHYISALKERGIDGLFDSIQAAYNAAFI 350
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++ T +ITR L SA++ P R L+RPK+RYAHQGG NPP+IVIHGN L I + Y RY
Sbjct: 351 NMPTPKITRVLQSAVERQAPPRAGLVRPKMRYAHQGGMNPPVIVIHGNSLGAISDSYTRY 410
Query: 418 L 418
L
Sbjct: 411 L 411
>gi|319763709|ref|YP_004127646.1| ribosome-associated gtpase enga [Alicycliphilus denitrificans BC]
gi|330824028|ref|YP_004387331.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans K601]
gi|317118270|gb|ADV00759.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans BC]
gi|329309400|gb|AEB83815.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans K601]
Length = 447
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/421 (52%), Positives = 298/421 (70%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G GK FI+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGRQGKHEFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R GL QD I +LR+ G+P VL NK
Sbjct: 61 EPDASSGIYREMAKQTQQAVAEADVVIFVVDVRGGLSAQDHDIAKYLRRLGKPCVLAGNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
+E + S L +FYELG+G H +SA +G G+++ +E L ++ LP + E +
Sbjct: 121 AEGMQDSAHLAEFYELGLGEVHPVSAAHGQGVRSLVELALKSLALP-----EAGEGDVVA 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +K+ LIDTA
Sbjct: 176 EANVIRLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQKFELIDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVI 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ R+ ++ +I+ +L+FL FA +FISA+K I SI Y S+
Sbjct: 296 AVNKWDAVDDYGRQQLERSIETRLSFLKFAPLHFISAMKRQGIGPLWASIVQAYKSANRK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +TR L A++ P R + RPKLRYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MPTPVLTRLLQEAVQFQSPKRSGMFRPKLRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|422321708|ref|ZP_16402753.1| GTP-binding protein engA [Achromobacter xylosoxidans C54]
gi|317403342|gb|EFV83855.1| GTP-binding protein engA [Achromobacter xylosoxidans C54]
Length = 451
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/420 (52%), Positives = 304/420 (72%), Gaps = 3/420 (0%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G+ FI+IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGEIPFIVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
P K GI+ EM +QT+QAI E+D+++F+VD R GL D I LRKSGQ ++L +NK
Sbjct: 64 PVAKDGILLEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIATLLRKSGQQRVLLAVNK 123
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + + ++ +F+ELG+G P+ ISA +G+GI + +E L ++ H
Sbjct: 124 AEGMGAGAAIAEFHELGLGQPYPISAAHGDGIVDLIELALQDLAEPPAEEEEPAEEGEHD 183
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+ FE + ++Y LIDTAG
Sbjct: 184 -HRIKLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAG 242
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE +EKFSVIKTL++I +NVV+L+LDAQ IS QD +IA F+ E+GR+++V
Sbjct: 243 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQTEISEQDAHIAGFVLETGRAVVVA 302
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +++ I+ +KL FLSFA + ISA++ I ++S+N + ++ L
Sbjct: 303 VNKWDGLDGEEKERIEREFMRKLRFLSFARVHTISALRGQGIKPLLKSVNAAHAAAFAKL 362
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TR L +A++ PP RK + RPK+RYAHQGG+NPP++VIHGN L + + Y+RYLE
Sbjct: 363 STPKLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDAVPDSYRRYLE 422
>gi|424776097|ref|ZP_18203082.1| GTP-binding protein Der [Alcaligenes sp. HPC1271]
gi|422888557|gb|EKU30943.1| GTP-binding protein Der [Alcaligenes sp. HPC1271]
Length = 452
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/423 (52%), Positives = 303/423 (71%), Gaps = 11/423 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGR NVGKSTLFNRLT SR ALVAN+PGLTRDRHYGEG +G + +I++DTGGFE
Sbjct: 7 KPVVALVGRANVGKSTLFNRLTRSRAALVANFPGLTRDRHYGEGRVGSRPYIVVDTGGFE 66
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P K G++ EM +QT+QAI E+D+++F+VD R+G+ D I LRK GQ ++L +NK+
Sbjct: 67 PVAKTGMLLEMARQTQQAIAEADVVVFLVDAREGVNALDLEIAQLLRKLGQKVLLAVNKA 126
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNF----LENILTIELPYKKFFKKKEFTN 176
E + + ++F+ELG+G P++ISA +G+G++ LE + E P + EF +
Sbjct: 127 EGMRYEAGGVEFHELGLGQPYLISASHGDGVEELINLALEQVPNPE-PEEDGQDDDEFQH 185
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
IK+AIVG+PNVGKSTLIN+L+GE+RVI +D PGTTRD+I+ FE N +Y LID
Sbjct: 186 -----RIKLAIVGRPNVGKSTLINTLVGEDRVIAFDQPGTTRDAIEIEFERNGVEYTLID 240
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K FE +EKFSVIKTL++I NVV+L++DA IS QD +IA F+ E+GR+L
Sbjct: 241 TAGLRKRGKVFEAVEKFSVIKTLQAIEACNVVLLMIDAHTEISDQDASIAGFVVETGRAL 300
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+V +NKWD + QR+ IK +KL FL+FA + +SA+K IN ++S+N + ++
Sbjct: 301 VVGINKWDGLDEYQREWIKREFDRKLRFLNFAKMHTLSALKGQGINPLLKSVNAAHAAAF 360
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
LST ++TR + A++ P RK + RPKLRYAHQGG NPPI+VIHGN L I + Y+R
Sbjct: 361 SKLSTPKLTRVMQEAVEQQQPPRKGIFRPKLRYAHQGGMNPPIVVIHGNALDAISDSYRR 420
Query: 417 YLE 419
YLE
Sbjct: 421 YLE 423
>gi|351731464|ref|ZP_08949155.1| GTP-binding protein Der [Acidovorax radicis N35]
Length = 447
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/421 (51%), Positives = 300/421 (71%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R G+ QD I N+LR+ G+P VLV NK
Sbjct: 61 EPDASSGIYKEMAKQTQQAVAEADVVIFVVDARAGVSAQDHDIANYLRRLGKPCVLVANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E + + L +FYELG+G + +SA +G GI++ ++ L ++LP I
Sbjct: 121 AEGMLEGVQLAEFYELGLGEVYPVSAAHGQGIRSLVDIALEPLQLPEPDDSDGDPDKGI- 179
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +++ L+DTA
Sbjct: 180 ----IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR+++V
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVV 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR++++ +I+ +L FL FA +FISA K + SI + ++
Sbjct: 296 AVNKWDAVDDYQRQLLERSIETRLAFLKFASLHFISAKKRQGLGPLWTSIAQAHKAATCK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST +TR L+ A++ P R + RPKLRYAHQGG NPP+IV+HGN L+++ + YKR+L
Sbjct: 356 MSTPILTRLLLEAVQFQSPKRAGMFRPKLRYAHQGGMNPPVIVVHGNSLEHVTDAYKRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|359798964|ref|ZP_09301533.1| GTP-binding protein Der [Achromobacter arsenitoxydans SY8]
gi|359363102|gb|EHK64830.1| GTP-binding protein Der [Achromobacter arsenitoxydans SY8]
Length = 450
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/420 (52%), Positives = 302/420 (71%), Gaps = 4/420 (0%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR ALVA+Y GLTRDRHYGEG +G FI IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDIPFIAIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
P K GI+ EM +QT+QAI E+D+++F+VD R G+ D I LRKSGQ ++L +NK
Sbjct: 64 PVAKDGILLEMARQTRQAIAEADVVVFLVDARAGINAHDHEIAQLLRKSGQQRVLLAVNK 123
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++ +F+ELG+G P+ ISA +G+GI + +E L +L ++ H
Sbjct: 124 AEGMGLGPAISEFHELGLGQPYPISAAHGDGIVDLIELALK-DLAEPPAEEEPAEEGEHD 182
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTLIN+ +GE RVI +D PGTTRD+I+ FE + ++Y LIDTAG
Sbjct: 183 -HRIKLAIVGRPNVGKSTLINTFMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAG 241
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE +EKFSVIKTL++I +NVV+L+LDAQ IS QD +IA F+ E+GR+++V
Sbjct: 242 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQTEISEQDAHIAGFVLETGRAVVVA 301
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +++ I+ +KL FLSFA + ISA++ I ++SIN + ++ L
Sbjct: 302 VNKWDGLDGEEKERIEREFNRKLRFLSFARVHTISALRGQGIKPLLKSINSAHAAAFAKL 361
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TR L +A++ PP RK + RPK+RYAHQGG+NPP++VIHGN L I + Y+RYLE
Sbjct: 362 STPKLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDAIPDSYRRYLE 421
>gi|124267181|ref|YP_001021185.1| GTP-binding protein EngA [Methylibium petroleiphilum PM1]
gi|166225824|sp|A2SHB1.1|DER_METPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|124259956|gb|ABM94950.1| putative GTP-binding protein EngA [Methylibium petroleiphilum PM1]
Length = 446
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/420 (51%), Positives = 302/420 (71%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPVL LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G +G++ FI++DTGGF
Sbjct: 1 MKPVLALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGDGRLGEREFIVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + GI EM KQT+QA+ ESD++IF+VD R G+ QD I +LR +G+ ++L NK
Sbjct: 61 EPTAESGIYKEMAKQTRQAVAESDVVIFVVDVRAGVTGQDHDIARYLRTAGKKVLLAANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + I L +FYELG+G P +S+ +G GI++ +LT L F + +
Sbjct: 121 AEGMLEGIQLAEFYELGMGEPLAVSSAHGQGIRS----LLTAALEDFAFDEPDDLALDDP 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +K+ LIDTAG
Sbjct: 177 ERPIRLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFERNGQKFELIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K FE IEKFSV+KTL++I +ANVV+LLLDA Q ++ QD +IA +I +SGR++++
Sbjct: 237 LRRKGKVFESIEKFSVVKTLQAIADANVVLLLLDATQGVTDQDAHIAGYILDSGRAVVLA 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD++ QR++++ +I+++L FL FA ISAIK + ++I + S+ L
Sbjct: 297 VNKWDAVDSYQRELLQRSIEQRLAFLKFAPVLHISAIKRQGLGPVWKAIADAWASATKKL 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T +TR L+ A++ P R RPKLRYAHQGG+NPP+IVIHGN L+++ + YKR+LE
Sbjct: 357 ATPVLTRVLLEAVQFQQPKRAGAFRPKLRYAHQGGQNPPVIVIHGNSLEHVTDAYKRFLE 416
>gi|293604545|ref|ZP_06686950.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553]
gi|292817126|gb|EFF76202.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553]
Length = 454
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/424 (52%), Positives = 308/424 (72%), Gaps = 6/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G+ FI IDTGGF
Sbjct: 3 FKPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGEIPFIAIDTGGF 62
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVIN 119
EP K GI+ EM +QT+QAI E+D+++F+VD R GL D I LRKSGQ ++L +N
Sbjct: 63 EPVAKDGILLEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIAQLLRKSGQQRVLLAVN 122
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYK-KFFKKKEFT 175
K+E + ++ +F+ELG+G P+ ISA +G+GI + +E L E P + + F++ E
Sbjct: 123 KAEGMGLGPAISEFHELGLGQPYPISAAHGDGIVDLIELALKDLAEPPAEAEPFEEGE-G 181
Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
++ IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+ F+ + ++Y LI
Sbjct: 182 DLEHDHRIKLAIVGRPNVGKSTLINTLMGEERVIAFDLPGTTRDAIEIDFDRDGRRYTLI 241
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG+R+R K FE +EKFSVIKTL++I +NVV+L+LDA IS QD +IA F+ E+GR+
Sbjct: 242 DTAGLRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAHTEISEQDAHIAGFVLETGRA 301
Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
++V +NKWD + +++ I+ ++KL FLSFA + ISA++ I ++SIN + ++
Sbjct: 302 VVVAINKWDGLDGEEKERIEREFQRKLRFLSFARVHTISALRGQGIKPLLKSINSAHAAA 361
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
LST ++TR L +AI+ P RK + RPK+RYAHQGG+NPP++VIHGN L I + Y+
Sbjct: 362 FAKLSTPKLTRELQAAIEQQQPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDAIPDSYR 421
Query: 416 RYLE 419
RYLE
Sbjct: 422 RYLE 425
>gi|406975213|gb|EKD98045.1| hypothetical protein ACD_23C00611G0002 [uncultured bacterium]
Length = 447
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/421 (51%), Positives = 301/421 (71%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R G+ QD I N+LR+ G+P VLV NK
Sbjct: 61 EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGVSAQDHDIANYLRRLGKPCVLVANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E + I L +FYELG+G+ + +SA +G GI+ ++ L + LP ++ +
Sbjct: 121 AEGMLQGIQLAEFYELGLGDVYPVSAAHGQGIRGLVDLALEPLHLPDPDDTEESVDKGV- 179
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +++ L+DTA
Sbjct: 180 ----IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR++++ +I+ +L FL FA +FISA K + SI + ++
Sbjct: 296 AVNKWDAVDDYQRQLLERSIETRLAFLKFAAMHFISAKKRQGLGPLWVSIAQAHKAATCK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST +TR L+ A++ P R + RPK+RYAHQGG NPP+IVIHGN L+++ + +KR+L
Sbjct: 356 MSTPVLTRVLLEAVQFQAPKRAGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAFKRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|120610115|ref|YP_969793.1| GTP-binding protein EngA [Acidovorax citrulli AAC00-1]
gi|166224298|sp|A1TM31.1|DER_ACIAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|120588579|gb|ABM32019.1| small GTP-binding protein [Acidovorax citrulli AAC00-1]
Length = 447
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/421 (50%), Positives = 303/421 (71%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G +GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKLGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R GL QD I N+LR+ G+P +LV NK
Sbjct: 61 EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGLSAQDHDIANYLRRLGKPCLLVGNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
+E + + L +FYELG+G +SA +G G+++ LE+ L T++L + ++
Sbjct: 121 AEGMREGVQLAEFYELGLGEVLPVSAAHGQGVRSMLESALDTLQL-----PEPEDEPEDG 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +++ LIDTA
Sbjct: 176 EDKPIRLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQQFELIDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ R++++ +I+ +L+FL FA +FISA K + SI + ++
Sbjct: 296 AVNKWDAVDDYGRQMLERSIETRLSFLKFASLHFISAKKRQGLGPLWTSIAQAHKAATCK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +TR L+ A++ P R + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MPTPVLTRLLLEAVQFQAPKRSGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|241764499|ref|ZP_04762520.1| small GTP-binding protein [Acidovorax delafieldii 2AN]
gi|241366083|gb|EER60680.1| small GTP-binding protein [Acidovorax delafieldii 2AN]
Length = 462
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/421 (51%), Positives = 298/421 (70%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G GK +I+IDTGGF
Sbjct: 16 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 75
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R G+ QD I N+LR+ G+P VLV NK
Sbjct: 76 EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGVSAQDHDIANYLRRLGKPCVLVANK 135
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E + L +FYELG+G + +SA +G GI+ ++ L + LP + +
Sbjct: 136 AEGMLQGGQLAEFYELGLGEVYPVSAAHGQGIRGLVDLALEPLHLP-----EPDDAEQAA 190
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +++ L+DTA
Sbjct: 191 DKGTIKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTA 250
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 251 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 310
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR++++ +I+ +L FL FA +FISA K + SI + ++
Sbjct: 311 AVNKWDAVDEYQRQLLERSIETRLAFLKFAALHFISAKKRQGLGPLWASIVQAHKAATCK 370
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST +TR L+ A++ P R + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 371 MSTPVLTRLLLEAVQFQTPKRAGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 430
Query: 419 E 419
E
Sbjct: 431 E 431
>gi|311105363|ref|YP_003978216.1| GTP-binding protein EngA [Achromobacter xylosoxidans A8]
gi|310760052|gb|ADP15501.1| GTP-binding protein EngA [Achromobacter xylosoxidans A8]
Length = 450
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/420 (52%), Positives = 305/420 (72%), Gaps = 4/420 (0%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR ALVA+Y GLTRDRHYGEG +G+ FI+IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGEIPFIVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
P K GI+ EM +QT+QAI E+D+++F+VD R G+ D I LRKSGQ ++L +NK
Sbjct: 64 PVAKDGILLEMARQTRQAIAEADVVVFLVDARAGINAHDHEIAQLLRKSGQQRVLLAVNK 123
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + + ++ +F+ELG+G P+ ISA +G+GI + +E L +L ++ H
Sbjct: 124 AEGMGAGSAISEFHELGLGQPYPISAAHGDGIVDLIELALQ-DLAEPPAEEESPEEGEHD 182
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+ FE + ++Y LIDTAG
Sbjct: 183 -HRIKLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAG 241
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE +EKFSVIKTL++I +NVV+L+LDAQ IS QD +IA F+ E+GR+++V
Sbjct: 242 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQTEISEQDAHIAGFVLETGRAVVVA 301
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++ I+ ++KL FLSFA + ISA++ + ++SIN + ++ L
Sbjct: 302 INKWDGLDGEAKERIEREFQRKLRFLSFARMHTISALRGQGVKPLLKSINAAHAAAFAKL 361
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TR L +A++ P RK + RPK+RYAHQGG+NPP++VIHGN L I + Y+RYLE
Sbjct: 362 STPKLTRELQTAVEQQQPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDAIPDSYRRYLE 421
>gi|326316284|ref|YP_004233956.1| ribosome-associated GTPase EngA [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323373120|gb|ADX45389.1| ribosome-associated GTPase EngA [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 447
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/421 (51%), Positives = 301/421 (71%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G +GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKLGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R GL QD I N+LR+ G+P +LV NK
Sbjct: 61 EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGLSAQDHDIANYLRRLGKPCLLVGNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
+E + L +FYELG+G +SA +G G+++ LE L T++L + ++
Sbjct: 121 AEGMREGAQLAEFYELGLGEVLPVSAAHGQGVRSLLETALETLQL-----PEPEDEPEDG 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +++ LIDTA
Sbjct: 176 EDKPIRLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQQFELIDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ R++++ +I+ +L+FL FA +FISA K + SI + S+
Sbjct: 296 AVNKWDAVDDYGRQMLERSIETRLSFLKFASLHFISAKKRQGLGPLWTSIAQAHKSATCK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +TR L+ A++ P R + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MPTPVLTRLLLEAVQFQTPKRSGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|423016755|ref|ZP_17007476.1| GTP-binding protein Der [Achromobacter xylosoxidans AXX-A]
gi|338780183|gb|EGP44598.1| GTP-binding protein Der [Achromobacter xylosoxidans AXX-A]
Length = 451
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/420 (51%), Positives = 302/420 (71%), Gaps = 3/420 (0%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G FI IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGDIPFIAIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
P K GI+ EM +QT+QAI E+D+++F+VD R GL D I LRKSGQ ++L +NK
Sbjct: 64 PVAKDGILLEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIATLLRKSGQQRVLLAVNK 123
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + + ++ +F+ELG+G P+ ISA +G+GI + +E L ++ H
Sbjct: 124 AEGMGAGAAIAEFHELGLGQPYPISAAHGDGIVDLIELALQDLAEPPAEEEEAAEEGEHD 183
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+ FE + ++Y LIDTAG
Sbjct: 184 -HRIKLAIVGRPNVGKSTLINTLMGEERVIAFDMPGTTRDAIEIDFERDGRRYTLIDTAG 242
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE +EKFSVIKTL++I +NVV+L+LDAQ IS QD +IA F+ E+GR++++
Sbjct: 243 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQTEISEQDAHIAGFVLETGRAVVLA 302
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +++ I+ +KL FLSFA + ISA++ I ++S+N + ++ L
Sbjct: 303 INKWDGLDGEEKERIEREFMRKLRFLSFARVHTISALRGQGIKPLLKSVNAAHAAAFAKL 362
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TR L +A++ PP RK + RPK+RYAHQGG+NPP++VIHGN L + + Y+RYLE
Sbjct: 363 STPKLTRELQAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDSVPDSYRRYLE 422
>gi|407938384|ref|YP_006854025.1| GTP-binding protein Der [Acidovorax sp. KKS102]
gi|407896178|gb|AFU45387.1| GTP-binding protein Der [Acidovorax sp. KKS102]
Length = 447
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/421 (50%), Positives = 300/421 (71%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R G+ QD I N+LR+ G+P VLV NK
Sbjct: 61 EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGVSAQDHDIANYLRRLGKPCVLVANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-ELPYKKFFKKKEFTNIH 178
+E + + L +FYELG+G + +SA +G GI++ ++ L + LP + +
Sbjct: 121 AEGMLQGVQLAEFYELGLGEVYPVSAAHGQGIRSLVDIALELLNLP-----EPDDSDATL 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +++ L+DTA
Sbjct: 176 DKGVIKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I A+VV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESAHVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR++++ +I+ +L FL FA +FISA K + SI + ++
Sbjct: 296 AVNKWDAVDDYQRQLLERSIETRLAFLKFASLHFISAKKRQGLGPLWTSIAQAHRAATCK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST +TR L+ A++ P R + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MSTPVLTRLLLEAVQFQSPKRAGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|89901081|ref|YP_523552.1| GTP-binding protein EngA [Rhodoferax ferrireducens T118]
gi|122479081|sp|Q21W32.1|DER_RHOFD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|89345818|gb|ABD70021.1| Small GTP-binding protein domain [Rhodoferax ferrireducens T118]
Length = 447
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/421 (50%), Positives = 296/421 (70%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG GK FI+IDTGGF
Sbjct: 1 MKPVVALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNAKQGKHEFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT QA+ E+D++IF+VD R+G+ QD I +LR+ G+P VL NK
Sbjct: 61 EPDAAGGIFKEMAKQTTQAVAEADVVIFVVDAREGISAQDHEIAKYLRRLGKPCVLAANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E + + L +F+ELG+G H ISA +G GI+ ++ L + L + ++ I
Sbjct: 121 AEGMLAGAQLVEFFELGLGEVHAISAAHGQGIRTLVDLALAPLHLEDQDDADEQREPGI- 179
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +K+ L+DTA
Sbjct: 180 ----IKLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFERNGQKFELVDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K FE IEKFSV+KTL++I +NVV+LL+DA Q ++ QD +IA +I E+GR++++
Sbjct: 236 GLRRRGKVFEAIEKFSVVKTLQAIESSNVVLLLIDATQGVTDQDAHIAGYILENGRAVVI 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR+++K +I+ +L FL FA + ISA K + SI Y ++
Sbjct: 296 AVNKWDAVDEYQRELVKRSIETRLPFLKFATMHLISATKRQGLGPLWASIAQAYKAANCK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST +TR L+ A++ P R + RPKLRYAHQGG NPP+I+IHGN L+++ + YKR+L
Sbjct: 356 MSTPILTRLLLEAVQFQSPKRSGMFRPKLRYAHQGGMNPPVIIIHGNSLEHVTDAYKRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|421482982|ref|ZP_15930561.1| GTP-binding protein Der [Achromobacter piechaudii HLE]
gi|400198786|gb|EJO31743.1| GTP-binding protein Der [Achromobacter piechaudii HLE]
Length = 450
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/420 (52%), Positives = 303/420 (72%), Gaps = 4/420 (0%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR ALVA++ GLTRDRHYGEG +G+ FI IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRAALVADFSGLTRDRHYGEGRVGEIPFIAIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
P K GI+ EM +QT+QAI E+D+++F+VD R G+ D I LRKSGQ ++L +NK
Sbjct: 64 PVAKDGILLEMARQTRQAIAEADVVVFLVDARAGINAHDHEIAQLLRKSGQQRVLLAVNK 123
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++ +F+ELG+G P+ ISA +G+GI + +E L +L ++ H
Sbjct: 124 AEGMGLGPAISEFHELGLGQPYPISAAHGDGIVDLIELALK-DLAEPPVEEEVFEEGDHD 182
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTLIN+L+GE RVI +D PGTTRD+I+ F+ + ++Y LIDTAG
Sbjct: 183 -HRIKLAIVGRPNVGKSTLINTLMGEERVIAFDLPGTTRDAIEIDFDRDGRRYTLIDTAG 241
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE +EKFSVIKTL++I +NVV+L+LDA IS QD +IA F+ E+GR+++V
Sbjct: 242 LRKRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAHTEISEQDAHIAGFVLETGRAVVVA 301
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +++ I+ ++KL FLSFA + ISA++ I ++SIN + ++ L
Sbjct: 302 INKWDGLDGEEKERIEREFQRKLRFLSFARMHTISALRGQGIKPLLKSINSAHAAAFAKL 361
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TR L +AI+ P RK + RPK+RYAHQGG+NPP++VIHGN L I + Y+RYLE
Sbjct: 362 STPKLTRELQAAIEQQQPPRKGIFRPKMRYAHQGGQNPPLVVIHGNALDAIPDSYRRYLE 421
>gi|163856334|ref|YP_001630632.1| GTP-binding protein EngA [Bordetella petrii DSM 12804]
gi|229710727|sp|A9IK66.1|DER_BORPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|163260062|emb|CAP42363.1| putative GTP-binding protein [Bordetella petrii]
Length = 451
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/420 (53%), Positives = 305/420 (72%), Gaps = 3/420 (0%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRLT SR ALVA+Y GLTRDRHYGEG +G FI+IDTGGFE
Sbjct: 4 KPVVALVGRPNVGKSTLFNRLTRSRAALVADYSGLTRDRHYGEGRVGDTPFIVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQP-IVLVINK 120
P K GI+ EM +QT+QAI E+D+++F+VD R G+ D I LRKSGQ +VL +NK
Sbjct: 64 PVAKTGILREMARQTRQAIAEADVVVFLVDARAGVNAHDHEIAQLLRKSGQQRVVLAVNK 123
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + + + +F+ELG+G P+ ISA +G+GI + + L +L + + ++
Sbjct: 124 AEGMGVGNATSEFHELGLGTPYPISAAHGDGIVDLIGLALQ-DLVEPEPEPAPDAADLPP 182
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKSTLIN+LLGE RVI +D PGTTRD+I+ FE + +KY LIDTAG
Sbjct: 183 DHRIKLAIVGRPNVGKSTLINTLLGEERVIAFDLPGTTRDAIEIDFERDGRKYTLIDTAG 242
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K FE +EKFSVIKTL++I +NVV+L+LDAQ +S QD +IA F+ E+GR+++V
Sbjct: 243 LRRRGKVFEAVEKFSVIKTLQAIEASNVVLLMLDAQTEVSEQDAHIAGFVLETGRAVVVA 302
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +QR+ I+ ++KL FLSFA + ISA+K I ++S+ + ++ L
Sbjct: 303 INKWDGLDIDQRERIEREFRRKLRFLSFAPTHTISALKGQGIKPVLKSVVAAHAAAFAKL 362
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST ++TR L +A++ PP RK + RPK+RYAHQGG+NPP+++IHGN L I + Y+RYLE
Sbjct: 363 STPKLTRELHAAVEQQPPPRKGIFRPKMRYAHQGGQNPPLVIIHGNALDAIPDSYRRYLE 422
>gi|302878616|ref|YP_003847180.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans
ES-2]
gi|302581405|gb|ADL55416.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans
ES-2]
Length = 470
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/421 (50%), Positives = 313/421 (74%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P LVLVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G +G++ ++++DTGG
Sbjct: 1 MLPTLVLVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRHYGRGRVGERPYLVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K GIM EM +Q++QA+ E+D+++F+VDGR G QD +I LRK+G+PI+L++NK
Sbjct: 61 EPVAKDGIMFEMARQSRQAVDEADVVLFLVDGRAGCTPQDLIIATQLRKTGKPILLLVNK 120
Query: 121 SENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-KEFTNIH 178
+E + + ++ +F+ELG+G P+ IS+ +G+ + + IE+ + F ++ E +
Sbjct: 121 AEGMARARVTAEFFELGLGEPYPISSAHGDNV------VEVIEIALENFPEEIVEEDAVV 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ K+AIVG+PNVGKSTL+N++LGE RVI +D PGTTRDSI FE + K+Y +IDTA
Sbjct: 175 EDKPPKLAIVGRPNVGKSTLVNAILGEQRVIAFDQPGTTRDSIYIDFERDGKQYTIIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E IEKFSVIKT+++I +ANVV+L++DA+ I+ QD ++A+F+ ++GR+L++
Sbjct: 235 GVRRRGKVEEAIEKFSVIKTMQAIEDANVVVLVVDARDQITEQDAHVADFVLQAGRALVL 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + ++QR+++K++I++KL+FL FA ++ISA+ N I++ ++S + Y +++
Sbjct: 295 AVNKWDGLDNHQREMVKSDIERKLHFLGFAKRHYISALNGNGISNVLKSADDAYAAAMSK 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST ++TRAL+ A + P + PK+RYAHQGG NPP+IVIHG+ L I Y RYL
Sbjct: 355 MSTPKLTRALLGATEKQAPPKVGRFLPKMRYAHQGGSNPPLIVIHGSGLDNIPASYARYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|451812243|ref|YP_007448697.1| GTP-binding protein [Candidatus Kinetoplastibacterium galatii
TCC219]
gi|451778145|gb|AGF49093.1| GTP-binding protein [Candidatus Kinetoplastibacterium galatii
TCC219]
Length = 449
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/420 (54%), Positives = 308/420 (73%), Gaps = 2/420 (0%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+VLVGRPNVGKSTLFNR T S+DALVAN+ GLTRDR YG+G G FIIIDTGGFE
Sbjct: 4 KPVIVLVGRPNVGKSTLFNRFTKSKDALVANFSGLTRDRIYGDGTFGNHEFIIIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLVINK 120
P K + ++ QT QAI+E+DI+IF+VDG+ GL D I NFLRK S I+LV+NK
Sbjct: 64 PSSKDQMYVKVANQTNQAILEADIVIFLVDGKDGLCSTDYDIANFLRKLSITNILLVVNK 123
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE N S+++ +F+ELG G+P +ISA +G+G+ +E+I +L + + N +
Sbjct: 124 SEGKNISAMASEFHELGFGSPFLISASHGDGVGLLIESIFESKLNFIDYKNDDVLQNDNL 183
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I+++IVG+PNVGKSTLINS+LGE R+IT+D+PGTTRDSI F + ++ Y+LIDTAG
Sbjct: 184 DRKIRLSIVGQPNVGKSTLINSMLGEERLITFDSPGTTRDSINVDFGFLDRSYVLIDTAG 243
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR++ + IEKFSV+KTL+SI ++NVV+LLLDA IS QD IA++I ESG+++++
Sbjct: 244 LRRRSRVSDYIEKFSVVKTLQSIEKSNVVLLLLDANIGISDQDARIASYILESGKAIVIA 303
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWDSI + R ++ K+KL+FLSFA +FISA++ NI + S+N YD++ L
Sbjct: 304 INKWDSISVDSRSTVEKEFKRKLHFLSFANMHFISALRKTNIKRLLFSVNDAYDAAFAKL 363
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRAL++AIK PP +K + PKLRYAHQGG NPP+IVIHGN L I + Y RYLE
Sbjct: 364 PTPKVTRALLNAIKQQPPPKKGIFVPKLRYAHQGGHNPPVIVIHGNCLTNIQDSYIRYLE 423
>gi|347820229|ref|ZP_08873663.1| GTP-binding protein Der [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 447
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/422 (49%), Positives = 304/422 (72%), Gaps = 9/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ +VGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G G+ +I+IDTGGF
Sbjct: 1 MKPVIAIVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGRQGRYEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM +QT+QA+ E+D++IF+VD R G+ QD+ I N+LR+SG+P VLV NK
Sbjct: 61 EPDASDGIYREMARQTQQAVAEADVVIFVVDARAGVCAQDQDIANYLRRSGRPCVLVANK 120
Query: 121 SEN-INSSISLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
+E + + FYELG+G + +SA +G G+++ +E L + LP +++ ++ +
Sbjct: 121 AEGMLEGAQPAQFYELGLGTVYPVSASHGQGVRDLVEVALDPLHLP------EQDASDAN 174
Query: 179 SIE-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ + I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE + +++ L+DT
Sbjct: 175 ADKGTIRLAVAGRPNVGKSTLINTWLGEERLVVFDMPGTTRDAIVVPFERSGQRFELVDT 234
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RR+ K F +EKFSV+KTL++I A+VV+L+LDA Q ++ QD +IA +I ESGRS+
Sbjct: 235 AGLRRKGKVFAAVEKFSVVKTLQAIESAHVVLLVLDATQGVTDQDAHIAGYILESGRSVT 294
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ VNKWD++ QR++++ +I+ +L FL FA +FISA K + SI Y S+
Sbjct: 295 LAVNKWDAVDAYQRQLLQRSIESRLAFLKFAALHFISAQKRQGLGPLWASIVQAYRSANC 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST +TR L+ A++ P R + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+
Sbjct: 355 KMSTPVLTRLLLEAVQFQSPKRAGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRF 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|383758605|ref|YP_005437590.1| GTP-binding protein EngA [Rubrivivax gelatinosus IL144]
gi|381379274|dbj|BAL96091.1| GTP-binding protein EngA [Rubrivivax gelatinosus IL144]
Length = 447
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/420 (49%), Positives = 297/420 (70%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNR+T SRDA+VA++ GLTRDRHYG+ +G + FI++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRITKSRDAIVADFAGLTRDRHYGDARLGGREFIVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE G++ EM KQTKQA+ E+D+++F+ D R GL QD I FLR + ++L +NK
Sbjct: 61 EPEKPSGVVAEMAKQTKQAVAEADVVVFVTDLRAGLSAQDHDIARFLRTQQKKVILAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S L +F+ELGIG PH +SA +G G+++ LE L + + +E +
Sbjct: 121 AEGMAESPLLAEFHELGIGEPHPLSASHGQGVRSLLETALE---DFDFGDEDEEGGEPDA 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+IK E +++ LIDTAG
Sbjct: 178 DAPIRLAVAGRPNVGKSTLINAWLGEERLVAFDQPGTTRDAIKVSLEREGRRFELIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K FE IEKFSV+KTL++I +ANVV+L++DA +S QD +IA ++ ESGR++++
Sbjct: 238 LRRKGKVFEAIEKFSVVKTLQAIADANVVVLMVDATVGVSEQDAHIAGYVLESGRAVVLA 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD+ QR+ ++ +I+ +L FL FA ISA K + + ++I H + S+ + +
Sbjct: 298 LNKWDATDDYQRQQLQRSIESRLAFLKFAPVLQISAKKRTGLTALWKAILHAHASATVKM 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T +TR LI A+++ P R+ RPK+RYAHQGG NPP++VIHGN L +I + YKRYLE
Sbjct: 358 PTPVLTRLLIDAVQHQAPRREGAFRPKMRYAHQGGMNPPLVVIHGNSLDHITDAYKRYLE 417
>gi|451936483|ref|YP_007460337.1| GTP-binding protein [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
gi|451777406|gb|AGF48381.1| GTP-binding protein [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
Length = 450
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/422 (54%), Positives = 312/422 (73%), Gaps = 5/422 (1%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+VLVGRPNVGKSTLFNR T S+DALVAN+ GLTRDR YG+G G+ FIIIDTGGFE
Sbjct: 4 KPVIVLVGRPNVGKSTLFNRFTKSKDALVANFSGLTRDRIYGDGAFGQHEFIIIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLVINK 120
P K + ++ QT QAI+ESDI+IF++DG+ GL D I NFLRK S + I+LV+NK
Sbjct: 64 PLSKDQMYMKVANQTNQAILESDIVIFLLDGKDGLCNTDYEIANFLRKLSIKNILLVVNK 123
Query: 121 SE--NINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-KKFFKKKEFTNI 177
SE I++ IS +F+ELG G+P +ISA +G+G+ + +E+I +L + + + +I
Sbjct: 124 SEGKTIDTVIS-EFHELGFGSPFLISASHGDGVGHLIESIFESKLNFIDQKYDNDVIQDI 182
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ I+++IVG+PNVGKSTLINS+LGE R+IT+D+PGTTRDSI F+++ + YI IDT
Sbjct: 183 DLDKKIRLSIVGQPNVGKSTLINSILGEERLITFDSPGTTRDSINVNFDFSGRSYIFIDT 242
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AGIRRR++ + IEKFSV+KTL SI ++NVV+L+LDA IS QD IA++I ESG++++
Sbjct: 243 AGIRRRSRVSDYIEKFSVVKTLHSIEKSNVVMLVLDANIGISDQDARIASYILESGKAIV 302
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ +NKWDSI +R I+ K+KL+FLSFA +FISA++ NIN + S+N YD++
Sbjct: 303 IAINKWDSISIERRSDIEREFKRKLHFLSFANMHFISALRKTNINRLLFSVNDAYDAAFA 362
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
LST ++TR L++A K PP + + PKLRYAHQGG+NPP+IVIHGN L I + Y RY
Sbjct: 363 KLSTPKVTRVLLNATKQQPPRKNGIFVPKLRYAHQGGQNPPVIVIHGNCLTNIQDSYMRY 422
Query: 418 LE 419
LE
Sbjct: 423 LE 424
>gi|264679419|ref|YP_003279326.1| small GTP-binding protein [Comamonas testosteroni CNB-2]
gi|262209932|gb|ACY34030.1| small GTP-binding protein [Comamonas testosteroni CNB-2]
Length = 446
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/423 (49%), Positives = 303/423 (71%), Gaps = 10/423 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGQGRQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ +GI EM KQT+QA+ E+D++IF++D R GL QD I N+LR+ G+P +LV NK
Sbjct: 61 EPDASRGIFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLGKPTILVANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLE---NILTIELPYKKFFKKKEFTN 176
+E + + L +FYELG+G +SA +G G+++ ++ +L + P + F +++
Sbjct: 121 AEGMKDGVQLSEFYELGLGEVVPVSAAHGQGVRSLVDAALGLLNLPEPEDEVFGEED--- 177
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ +++A+ G+PN GKSTLIN+ LGE R++ +D PGTTRD+I FE N +K+ LID
Sbjct: 178 ---QKPVRLAVAGRPNAGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQKFELID 234
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RR+ K FE IEKFSV+KTL++I ANVV+LL+DA Q ++ QD +IA +I ESGRS+
Sbjct: 235 TAGLRRKGKVFEAIEKFSVVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYILESGRSV 294
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
++ +NKWD++ QR++++ +I+ +L+FL FA +FISA K + +SI + ++
Sbjct: 295 VLGINKWDAVDDYQRQMLERSIETRLSFLKFAPLHFISAQKRQGLEPLWKSIIQAHRAAT 354
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ T +TR L+ +I+ P + RPK+RYAHQGG NPPIIVIHGN L+ + + YKR
Sbjct: 355 CKMPTPVLTRILMESIQFQTPKKVGAYRPKMRYAHQGGMNPPIIVIHGNSLELVTDAYKR 414
Query: 417 YLE 419
+LE
Sbjct: 415 FLE 417
>gi|121604778|ref|YP_982107.1| GTP-binding protein EngA [Polaromonas naphthalenivorans CJ2]
gi|166225835|sp|A1VNF8.1|DER_POLNA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|120593747|gb|ABM37186.1| small GTP-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 445
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/421 (51%), Positives = 295/421 (70%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA++ GLTRDRHYG G +G +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKTRDAIVADFAGLTRDRHYGNGKLGPHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM +QT+QA+ ESD++IF+VD R G+ QD I N+LRK G+P VL NK
Sbjct: 61 EPDAVTGIYKEMARQTRQAVAESDVVIFVVDARAGISAQDYDIANYLRKLGKPTVLAANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E + + +F+ELG+G +SA +G G++ ++ L + LP E T
Sbjct: 121 AEGLPEGTQVSEFFELGLGEMLAVSASHGQGMRMLVDLALAPLNLP-----DPAEETEQE 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE+ +K+ LIDTA
Sbjct: 176 DPAVIKLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFEHAGQKFELIDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIENANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR++++ +I+ +L FL FA + ISAIK + +SI + S+
Sbjct: 296 AVNKWDAVDAYQRELLQRSIETRLGFLKFASIHHISAIKRQGLGPVWKSIIQAHASANRK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST +TR L+ A++ P R + RPKLRYAHQGG NPPI++IHGN L ++ YKRYL
Sbjct: 356 MSTPVLTRLLMEAVQFQQPQRSGVFRPKLRYAHQGGMNPPIVIIHGNSLDHVTESYKRYL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|398805484|ref|ZP_10564457.1| ribosome-associated GTPase EngA [Polaromonas sp. CF318]
gi|398091520|gb|EJL81961.1| ribosome-associated GTPase EngA [Polaromonas sp. CF318]
Length = 447
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/421 (51%), Positives = 294/421 (69%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA++ GLTRDRHYG G +G +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKTRDAIVADFAGLTRDRHYGNGKLGPHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R GL QD I +LRK G+P VL NK
Sbjct: 61 EPDAASGIYKEMAKQTRQAVAEADVVIFVVDARAGLNAQDHDIAKYLRKLGKPTVLTANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E + + L +F+ELG+G +SA +G G++ ++ L + LP +E
Sbjct: 121 AEGMTEGVQLSEFFELGLGEVLPVSASHGQGMRTLVDTALAPLNLP-----DPEEEAEPQ 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE +KY LIDTA
Sbjct: 176 DPSVIRLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDTISVPFERAGQKYELIDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGRS++V
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIENANVVLLLLDATQGVTDQDAHIAGYILESGRSVVV 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNK D++ QR++++ +I+ +L FL FA + ISAIK + +SI + S+
Sbjct: 296 AVNKSDAVDSYQRELLERSIETRLGFLKFASIHAISAIKRQGLGPVWKSIVQAHASANRK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST +TR L+ A++ P R + RPKLRYAHQGG NPPII+IHGN L+++ YKRYL
Sbjct: 356 MSTPVLTRLLLEAVQFQQPQRSGVFRPKLRYAHQGGMNPPIIIIHGNSLEHVTESYKRYL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|332527857|ref|ZP_08403894.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2]
gi|332112434|gb|EGJ12227.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2]
Length = 447
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/420 (48%), Positives = 296/420 (70%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNR+T SRDA+VA++ GLTRDRHYG+ +G + FI++DTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRITKSRDAIVADFAGLTRDRHYGDARLGGREFIVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE G++ EM KQT+QA+ E+D+++F+ D R G+ QD I FLR + ++L +NK
Sbjct: 61 EPEKPSGVVAEMAKQTRQAVAEADVVVFVADLRAGVSAQDHDIARFLRTQQKKVILAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S L +F+ELGIG PH +SA +G G+++ LE L + + +E +
Sbjct: 121 AEGMAESPLLAEFHELGIGEPHPLSASHGQGVRSLLEAALE---DFDFGDEDEEGAEPDA 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+IK E +++ LIDTAG
Sbjct: 178 DAPIRLAVAGRPNVGKSTLINAWLGEERLVAFDQPGTTRDAIKVSLEREGRRFELIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K FE IEKFSV+KTL++I +ANVV+L++DA +S QD +IA ++ ESGR++++
Sbjct: 238 LRRKGKVFEAIEKFSVVKTLQAIADANVVVLMVDATVGVSEQDAHIAGYVLESGRAVVLA 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD+ QR+ ++ +I+ +L FL FA ISA K + + ++I H + S+ + +
Sbjct: 298 LNKWDATDEYQRQQLQRSIESRLAFLKFAPLLQISAKKRTGLTALWKAILHAHASATVKM 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T +TR LI A+++ P R RPK+RYAHQGG NPP++VIHGN L +I + YKRYLE
Sbjct: 358 PTPVLTRLLIDAVQHQAPRRDGAFRPKMRYAHQGGMNPPLVVIHGNSLDHITDAYKRYLE 417
>gi|438000040|ref|YP_007183773.1| GTP-binding protein [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451812969|ref|YP_007449422.1| GTP-binding protein [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|429339274|gb|AFZ83696.1| GTP-binding protein [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451778938|gb|AGF49818.1| GTP-binding protein [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 451
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/422 (54%), Positives = 305/422 (72%), Gaps = 4/422 (0%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP +VLVGRPNVGKSTLFNR T S+DALVAN+ GLTRDR YG+G G+ +FI+IDTGGFE
Sbjct: 4 KPAIVLVGRPNVGKSTLFNRFTKSKDALVANFSGLTRDRIYGDGMFGEYNFIVIDTGGFE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLVINK 120
P K + ++ QT QAI+++DI+IF+VDG+ GL D I NFLRK S + LVINK
Sbjct: 64 PLSKDKMYMKIANQTNQAILDADIVIFLVDGKDGLCNTDYDIANFLRKLSVTNVFLVINK 123
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE + +I+ +F+ELG G P +ISA +G+GI +E+I +L K+ K + +
Sbjct: 124 SEGRSIDTIASEFHELGFGAPFLISASHGDGIGFLIESIFKSKLYIDKYSKNDNVDSQND 183
Query: 180 IEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
Y I+++IVG+PNVGKSTLINS+LGE R+IT+D+PGTTRDSI F ++ + Y+LIDT
Sbjct: 184 DLYKKIRLSIVGQPNVGKSTLINSILGEERLITFDSPGTTRDSINIDFNFSGRSYVLIDT 243
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR++ + IEKFSVIKT++SI ++NVVIL LDA IS QD IA+FI ESG++++
Sbjct: 244 AGLRRRSRVSDCIEKFSVIKTIQSIEKSNVVILTLDANTGISDQDARIASFILESGKAIV 303
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ +NKWDSI + R I+ K+KL+FLSFA FISA++ NI + S+N YD++ +
Sbjct: 304 IAINKWDSISLDSRSAIEREFKRKLHFLSFANMYFISALRKTNIKRLLFSVNDAYDAAFV 363
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L T ++TR L+ A K PP +K + PKLRYAHQGG+NPP+IVIHGN L I + Y RY
Sbjct: 364 KLPTPKVTRVLLDATKQQPPPKKGIFVPKLRYAHQGGQNPPVIVIHGNCLTSIQDSYVRY 423
Query: 418 LE 419
LE
Sbjct: 424 LE 425
>gi|297538116|ref|YP_003673885.1| ribosome-associated GTPase EngA [Methylotenera versatilis 301]
gi|297257463|gb|ADI29308.1| ribosome-associated GTPase EngA [Methylotenera versatilis 301]
Length = 484
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/422 (51%), Positives = 297/422 (70%), Gaps = 9/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P +VLVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDRHYG G + ++++DTGGF
Sbjct: 1 MLPTVVLVGRPNVGKSTLFNRLTKSRDALVADLPGLTRDRHYGRGIGASQPYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP GI+ M QT AI E+D+IIF+VDGRQG QD I N LR+S P++L +NK
Sbjct: 61 EPNTDSGILKAMAVQTLLAIDEADVIIFLVDGRQGATPQDMEIANRLRRSKCPVLLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E +N ++ S +F+ELG+G+P IS+ +G G+K+ I+L + F + +E +
Sbjct: 121 TEGMNKAVVSAEFHELGLGDPLSISSAHGEGVKDI------IDLALESFHEVEEEPELDQ 174
Query: 180 I--EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
KVAIVG+PNVGKSTL+N+LLGE RVI +D PGTTRDSI E N K Y LIDT
Sbjct: 175 TGDRIPKVAIVGRPNVGKSTLVNALLGEERVIAFDEPGTTRDSISIDLEKNGKHYTLIDT 234
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+R + E IEKFSVIKT++SI EANVVIL++DAQ+ I+ QD ++A +I ++GR+L+
Sbjct: 235 AGVRKRGRVLEAIEKFSVIKTIQSIEEANVVILVVDAQEGITEQDAHVAAYILDAGRALV 294
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V +NKWD + +R +K I +KL FL FA F++ISA++ + +S++ + ++
Sbjct: 295 VAINKWDGLKEEERDWVKREIDRKLMFLDFAEFHYISALRKKGLPELFKSVDIAFKAAFA 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L+T ++TR LI A++ H P K IRPKLRYAHQGG NPPI+VIHGN + + + Y R+
Sbjct: 355 KLATPQLTRVLIDALQQHQPPISKGIRPKLRYAHQGGSNPPIVVIHGNHVDGVKDAYTRF 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|91788466|ref|YP_549418.1| GTP-binding protein EngA [Polaromonas sp. JS666]
gi|123355649|sp|Q12AC2.1|DER_POLSJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|91697691|gb|ABE44520.1| Small GTP-binding protein domain [Polaromonas sp. JS666]
Length = 447
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/420 (50%), Positives = 293/420 (69%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKST+FNRLT +RDA+VA++ GLTRDRHYG G +G +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTIFNRLTKTRDAIVADFAGLTRDRHYGNGKLGSHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D++IF+VD R G+ QD I NFLRK G+P VL NK
Sbjct: 61 EPDAASGIYKEMAKQTRQAVAEADVVIFVVDARAGISAQDHDIANFLRKLGKPTVLTANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + + +F+ELG+G +SA +G G+++ ++ + L E
Sbjct: 121 AEGMTEGVQFSEFFELGLGEVLPVSASHGQGMRSLVD----LALAPLHLADPDEEAEPQD 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++A+ G+PNVGKSTLIN+ LGE R++++D PGTTRD+I FE +K+ LIDTAG
Sbjct: 177 PSVIRLAVAGRPNVGKSTLINTWLGEERLVSFDLPGTTRDAISVPFERAGQKFELIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 237 LRRKGKVFEAIEKFSVVKTLQAIEGANVVLLLLDATQGVTDQDAHIAGYILESGRAVVLA 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ QR+ ++ +I+ +L FL FA + ISAIK + +SI + S+ +
Sbjct: 297 INKWDAVDAYQRETLERSIETRLAFLKFASIHKISAIKRQGLAPVWKSIVQAHASANRKM 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST +TR L+ A++ P R + RPK+RYAHQGG NPPII+IHGN L+++ YKRYLE
Sbjct: 357 STPVLTRLLLEAVQFQQPQRSGMFRPKMRYAHQGGMNPPIIIIHGNSLEHVTEAYKRYLE 416
>gi|319941508|ref|ZP_08015835.1| GTP-binding protein engA [Sutterella wadsworthensis 3_1_45B]
gi|319804982|gb|EFW01821.1| GTP-binding protein engA [Sutterella wadsworthensis 3_1_45B]
Length = 451
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/422 (48%), Positives = 298/422 (70%), Gaps = 6/422 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST FNRLT SRDA+VA++PGLTRDR YG+G +G +I++DTGGF
Sbjct: 1 MLPVIALVGRPNVGKSTFFNRLTRSRDAIVADFPGLTRDRQYGQGRVGPGPYIVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP +GI+ M Q + AI E+D+++F+ D R GL QD I LR++ +P+VL++NK
Sbjct: 61 EPVRTEGIVQAMAGQAELAIEEADVVLFLTDARAGLTPQDIRIAQHLRRADRPVVLLVNK 120
Query: 121 SENINSSISLDFYELGIGNPHIISALYGNGIKNFLE---NILTIELPYKKFFKKKEFTNI 177
+E + + +FYELG+G PH++S +G G+++ L+ + L + P F + + +
Sbjct: 121 AEGLTETAKAEFYELGLGEPHLVSGAHGQGVRDALDLAFSCLPEDFP---FDEPEAEEDD 177
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
IKV + G+PN GKSTLIN+L+GE RVI +D PGTTRD+IK FEY+ + Y L+DT
Sbjct: 178 DGPRRIKVTLAGRPNAGKSTLINALVGEERVIAFDMPGTTRDAIKIDFEYDGRPYELVDT 237
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R++ + FE +EKFSV+KTL++I +ANVVIL++DA++ +S D +IA ++ E+GR+L+
Sbjct: 238 AGLRKKGRVFEAVEKFSVVKTLQAIEDANVVILVVDAKEGVSEGDAHIAGYVLEAGRALV 297
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V VNKWD + +R+ ++++KL+FL +A ISA+K N +N M +++ + ++
Sbjct: 298 VAVNKWDLLDSYERERFNLDLERKLHFLRWARMIRISALKRNGLNHLMRAVDEAHAAAYA 357
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L T ++TRAL+ A++ P R K RPK RYAHQGG NPP+IVIHGN L+ IG Y+RY
Sbjct: 358 KLPTPKLTRALLEAVQRQQPPRAKGGRPKPRYAHQGGSNPPVIVIHGNALEDIGESYRRY 417
Query: 418 LE 419
LE
Sbjct: 418 LE 419
>gi|221066038|ref|ZP_03542143.1| small GTP-binding protein [Comamonas testosteroni KF-1]
gi|220711061|gb|EED66429.1| small GTP-binding protein [Comamonas testosteroni KF-1]
Length = 446
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/421 (50%), Positives = 299/421 (71%), Gaps = 6/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGQGRQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ +GI EM KQT+QA+ E+D++IF++D R GL QD I N+LR+ G+P +LV NK
Sbjct: 61 EPDASRGIFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLGKPTILVANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-ELPYKKFFKKKEFTNIH 178
+E + L +FYELG+G +SA +G G+++ ++ L + LP + E
Sbjct: 121 AEGMKDGAQLSEFYELGLGEVVPVSAAHGQGVRSLVDAALGLLNLPEPEEEAFGEEDQ-- 178
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++A+ G+PN GKSTLIN+ LGE R++ +D PGTTRD+I FE N +K+ LIDTA
Sbjct: 179 --KPVRLAVAGRPNAGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQKFELIDTA 236
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LL+DA Q ++ QD +IA +I ESGRS+++
Sbjct: 237 GLRRKGKVFEAIEKFSVVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYILESGRSVVL 296
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ QR++++ +I+ +L+FL FA +FISA K + +SI + ++
Sbjct: 297 AINKWDAVDDYQRQMLERSIETRLSFLKFAPLHFISAQKRQGLEPLWKSIIQAHRAATCK 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +TR L+ +I+ P + RPK+RYAHQGG NPPIIVIHGN L+ + + YKR+L
Sbjct: 357 MPTPVLTRILMESIQFQTPKKVGAYRPKMRYAHQGGMNPPIIVIHGNSLELVTDAYKRFL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|299530502|ref|ZP_07043922.1| GTP-binding protein EngA [Comamonas testosteroni S44]
gi|298721478|gb|EFI62415.1| GTP-binding protein EngA [Comamonas testosteroni S44]
Length = 446
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/421 (50%), Positives = 300/421 (71%), Gaps = 6/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGQGRQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ +GI EM KQT+QA+ E+D++IF++D R GL QD I N+LR+ G+P +LV NK
Sbjct: 61 EPDASRGIFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLGKPTILVANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-ELPYKKFFKKKEFTNIH 178
+E + + L +FYELG+G +SA +G G+++ ++ L + LP + E
Sbjct: 121 AEGMKDGVQLSEFYELGLGEVVPVSAAHGQGVRSLVDAALGLLNLPEPEEEVFGEEDQ-- 178
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++A+ G+PN GKSTLIN+ LGE R++ +D PGTTRD+I FE N +K+ LIDTA
Sbjct: 179 --KPVRLAVAGRPNAGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQKFELIDTA 236
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LL+DA Q ++ QD +IA +I ESGRS+++
Sbjct: 237 GLRRKGKVFEAIEKFSVVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYILESGRSVVL 296
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ QR++++ +I+ +L+FL FA +FISA K + +SI + ++
Sbjct: 297 GINKWDAVDDYQRQMLERSIETRLSFLKFAPLHFISAQKRQGLEPLWKSIIQAHRAATCK 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +TR L+ +I+ P + RPK+RYAHQGG NPPIIVIHGN L+ + + YKR+L
Sbjct: 357 MPTPVLTRILMESIQFQTPKKVGAYRPKMRYAHQGGMNPPIIVIHGNSLELVTDAYKRFL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|296136228|ref|YP_003643470.1| ribosome-associated GTPase EngA [Thiomonas intermedia K12]
gi|295796350|gb|ADG31140.1| ribosome-associated GTPase EngA [Thiomonas intermedia K12]
Length = 457
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/428 (49%), Positives = 300/428 (70%), Gaps = 9/428 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P++ LVGRPNVGKSTLFNR+T SRDA+VA+ PGLTRDRHYG + + I++DTGGF
Sbjct: 1 MTPIVSLVGRPNVGKSTLFNRMTRSRDAIVADMPGLTRDRHYGMLRMADRPVIVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP V GI+H+M +QT+QAI ESD+++F+VD R GL QD I LRK+G+PI+L +NK
Sbjct: 61 EPVVDTGIVHQMARQTRQAIAESDLVVFLVDLRTGLSPQDLHIAAELRKTGKPILLAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-------ELPYKKFFKKK 172
+E + +L +F+ELG+G P ISA +G+ + + L+ IL +P + +
Sbjct: 121 AEGRHGHAALAEFHELGLGEPFSISAAHGDSVPDLLDRILQALPSEPSEGIPETEAASEV 180
Query: 173 EFTNIHSIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKK 231
E+ +++AI G+PNVGKSTL+N+L+GE RVI +D PGTTRD+I+ FE + +K
Sbjct: 181 AAETTKPREHSLRLAIAGRPNVGKSTLVNALVGEERVIAFDMPGTTRDAIEVPFERDGRK 240
Query: 232 YILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYE 291
+ILIDTAG+RR+ K FE +EKFSVIKTL++I +ANVV+LLLDA + +S QD +IA+F E
Sbjct: 241 FILIDTAGLRRKGKVFEAVEKFSVIKTLQAIEQANVVVLLLDATEGVSDQDAHIASFAVE 300
Query: 292 SGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHV 351
+GR+L++ NKWD++ R+ + I+++L F+SFA F+ ISA + +N M+S+
Sbjct: 301 AGRALVLAANKWDAVDTYGRERLMVAIRQRLPFVSFAKFHSISARTGSGLNGLMKSVIAA 360
Query: 352 YDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIG 411
+ ++ L T ++TRA+I A+ P R +RPKLRYAHQGG NPPII+IHG+ L +
Sbjct: 361 HAAAYRKLPTPKLTRAIIEAVAQQQPPRSGPVRPKLRYAHQGGTNPPIIIIHGSALDRVP 420
Query: 412 NDYKRYLE 419
Y RYLE
Sbjct: 421 ATYTRYLE 428
>gi|418531060|ref|ZP_13096979.1| GTP-binding protein Der [Comamonas testosteroni ATCC 11996]
gi|371451769|gb|EHN64802.1| GTP-binding protein Der [Comamonas testosteroni ATCC 11996]
Length = 446
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/421 (50%), Positives = 299/421 (71%), Gaps = 6/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGQGRQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ +GI EM KQT+QA+ E+D++IF++D R GL QD I N+LR+ G+P +LV NK
Sbjct: 61 EPDASRGIFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLGKPTILVANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-ELPYKKFFKKKEFTNIH 178
+E + L +FYELG+G +SA +G G+++ ++ L + LP + E
Sbjct: 121 AEGMKDGAQLSEFYELGLGEVVPVSAAHGQGVRSLVDAALGLLNLPEPEEETFGEEDQ-- 178
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++A+ G+PN GKSTLIN+ LGE R++ +D PGTTRD+I FE N +K+ LIDTA
Sbjct: 179 --KPVRLAVAGRPNAGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQKFELIDTA 236
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LL+DA Q ++ QD +IA +I ESGRS+++
Sbjct: 237 GLRRKGKVFEAIEKFSVVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYILESGRSVVL 296
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ QR++++ +I+ +L+FL FA +FISA K + +SI + ++
Sbjct: 297 GINKWDAVDDYQRQMLERSIETRLSFLKFAPLHFISAQKRQGLEPLWKSIIQAHRAATCK 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +TR L+ +I+ P + RPK+RYAHQGG NPPIIVIHGN L+ + + YKR+L
Sbjct: 357 MPTPVLTRILMESIQFQTPKKVGAYRPKMRYAHQGGMNPPIIVIHGNSLELVTDAYKRFL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|374852463|dbj|BAL55395.1| GTP-binding protein EngA [uncultured beta proteobacterium]
Length = 455
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/424 (49%), Positives = 292/424 (68%), Gaps = 10/424 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P LVLVGRPNVGKSTLFNRLT SRDALVAN PGLTRDR YG G +G + ++++DT GF+P
Sbjct: 6 PTLVLVGRPNVGKSTLFNRLTRSRDALVANVPGLTRDRRYGRGKVGGRPYLVVDTAGFDP 65
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
K+G+ EM +Q + AI E+D+++F+VDGR GL D+ I ++LR G + +++NK+E
Sbjct: 66 TAKEGLTAEMVRQAELAIREADLVLFVVDGRAGLTPHDEAIADYLRALGVAVRVLVNKTE 125
Query: 123 NINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-FTNIHSI 180
++ +I+ +FY LG G P ISA +G+G++ + +L P+ K KE + S
Sbjct: 126 GLDRAIARAEFYALGFGEPLPISASHGDGVREMIHEVLA---PFPKPKPNKEPLAEMQSE 182
Query: 181 EY-----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
E I+VA++G+PNVGKSTLIN+LLGENR+I YD PGTTRD+I FE+N + Y L+
Sbjct: 183 ETGDEDGIRVAVLGRPNVGKSTLINALLGENRLIAYDMPGTTRDAIDVPFEHNGRAYTLV 242
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG+R++ + + IEKFSVIK L+++ +ANVVIL LDA Q + QD ++ FI E+GR+
Sbjct: 243 DTAGVRKKGRVTDTIEKFSVIKALQAVEQANVVILTLDATQEVGEQDAHLGGFILETGRA 302
Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
L++ VNKWD+ QR+ IK + KL FLSFA F+SA +++ M +++ + ++
Sbjct: 303 LVIAVNKWDAADAYQRQRIKTQLAHKLAFLSFAPVVFLSAKTGKGLDALMRAVDQAFAAA 362
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ L T ++TR L +K P R L RPK RYAHQGG NPPIIVIHGN L+++ Y
Sbjct: 363 MKKLPTPQLTRVLQELVKRQAPPRHGLFRPKPRYAHQGGSNPPIIVIHGNALEHLPKSYL 422
Query: 416 RYLE 419
RYLE
Sbjct: 423 RYLE 426
>gi|388567425|ref|ZP_10153859.1| GTP-binding protein Der [Hydrogenophaga sp. PBC]
gi|388265447|gb|EIK91003.1| GTP-binding protein Der [Hydrogenophaga sp. PBC]
Length = 446
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/421 (49%), Positives = 293/421 (69%), Gaps = 5/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA+ GLTRDRHYG G +GK+ +I+IDTGGF
Sbjct: 1 MKPVVALVGRPNVGKSTLFNRLTGTRDAIVADLAGLTRDRHYGNGRLGKQEYIVIDTGGF 60
Query: 61 EPEVKKG-IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
EP+ +G I EM +QT+QA+ ESD+++F+VD R GL QD I +LR+ G+P VLV N
Sbjct: 61 EPDAGEGSIYREMAQQTRQAVAESDVVLFVVDARAGLSAQDHDIATYLRRLGKPCVLVAN 120
Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K+E + ++F+ELG+G +S +G G+++ +E +L LP + E
Sbjct: 121 KAEGMTQGAQFVEFFELGLGEVLPVSGAHGQGVRSMIEAVLE-RLP--GLAEPDEDEAQA 177
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ + I++ + G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I+ FE N +++ L+DTA
Sbjct: 178 APDTIRLTVAGRPNVGKSTLINAWLGEERLVAFDMPGTTRDAIRVPFERNGQRFELVDTA 237
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ + FE IEKFSVIKTL++I A+VV+LLLDA Q ++ QD +IA +I ESGR+++V
Sbjct: 238 GLRRKGRVFEAIEKFSVIKTLQAIESAHVVLLLLDATQGVTDQDAHIAGYILESGRAVVV 297
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ QR+ I+ I+ +L FL FA + ISA K + SI + S++
Sbjct: 298 AINKWDAVDSYQREQIERQIETRLAFLKFAALHRISARKRQGLAPLWASIAQAHASAMRK 357
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST +TR L A+ P R RPK+RYAHQGG NPP+IVIHGN L + + Y+R+L
Sbjct: 358 MSTPVLTRLLQEAVAFQAPSRGGQARPKMRYAHQGGMNPPVIVIHGNSLDRVPDAYRRFL 417
Query: 419 E 419
E
Sbjct: 418 E 418
>gi|389700023|ref|ZP_10185135.1| ribosome-associated GTPase EngA [Leptothrix ochracea L12]
gi|388591284|gb|EIM31541.1| ribosome-associated GTPase EngA [Leptothrix ochracea L12]
Length = 449
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/421 (49%), Positives = 292/421 (69%), Gaps = 4/421 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA+YPGLTRDRHYG+G + +FI+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTGSRDAIVADYPGLTRDRHYGDGKLAGHAFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ +GI EM +QT+QA+ E+D ++F+VD R GL QD I +LR + + +VL NK
Sbjct: 61 EPDCTEGIFKEMARQTRQAVAEADAVVFVVDLRAGLSAQDHDIAKYLRSANKRVVLAANK 120
Query: 121 SEN-INSSISLDFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E IN+ +FYELGIG P IS+ +G GI++ +E L +ELP
Sbjct: 121 AEGMINAPQLAEFYELGIGQPVAISSAHGQGIRSLVELALEGVELPDDDDEASGPIGG-- 178
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I++A+ G+PN GKSTLIN+ LGE R++ +D PGTTRD+I FE N + + LIDTA
Sbjct: 179 AARPIRLAVAGRPNAGKSTLINAWLGEERLVAFDLPGTTRDTIHVPFERNGQHFELIDTA 238
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I +ANVV+L++DA + +S QD +IA +I E+GR+++V
Sbjct: 239 GLRRKGKVFEAIEKFSVVKTLQAIADANVVLLVVDATEGVSDQDAHIAGYILEAGRAVVV 298
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD+I QR+ + +I+ +L FL FA ISA + + ++I + +++
Sbjct: 299 AINKWDAIDRYQRERLDRSIELRLPFLKFAPILQISATRRQGLGPLWQAITGAWAAAMAK 358
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +TR L A++ P R RPKLRYAHQGG+NPP++VIHGN + + + YKRYL
Sbjct: 359 MPTPVLTRLLQEAVQFQQPKRVGSTRPKLRYAHQGGQNPPLVVIHGNAVDQVTDVYKRYL 418
Query: 419 E 419
E
Sbjct: 419 E 419
>gi|332530165|ref|ZP_08406113.1| GTP-binding protein Der [Hylemonella gracilis ATCC 19624]
gi|332040357|gb|EGI76735.1| GTP-binding protein Der [Hylemonella gracilis ATCC 19624]
Length = 444
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/421 (50%), Positives = 293/421 (69%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPVL LVGRPNVGKSTLFNRLT +RDA+VA+Y GLTRDRHYG G G++ FI+IDTGGF
Sbjct: 1 MKPVLALVGRPNVGKSTLFNRLTQTRDAIVADYAGLTRDRHYGNGRQGRREFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + GI EM QT+QA+ E+D +IF+VD R GL QD I N+LRK G+P VL NK
Sbjct: 61 EPTAETGIYKEMANQTRQAVAEADAVIFVVDARAGLSAQDHDIANYLRKLGKPCVLTANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E + L +FYELG+G +SA +G G++ ++ L + LP +++ +
Sbjct: 121 AEGMQEGAQLAEFYELGLGEVLPVSAAHGQGLRTLVDQALEPLNLP------QEDEEDAV 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I+ A+ G+PNVGKSTLIN+ LGE R+I +D PGTTRD+I+ FE +K+ LIDTA
Sbjct: 175 EPGVIRFAVAGRPNVGKSTLINTWLGEERLIAFDMPGTTRDAIRVPFERQGQKFELIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ + FE +EKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 235 GLRRKGRVFEAVEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR+ ++ ++ +L FL FA + ISA K + +S+ + ++
Sbjct: 295 AVNKWDAVDDYQRQQLQRQLETRLTFLKFANLHLISARKRQGLEPLWKSMLKAHQAANRK 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST +TR L A++ P + + RPKLRYAHQGG NPP+IV+HGN L+++ + YKRYL
Sbjct: 355 MSTPVLTRLLQQAVQFQTPKKSGMYRPKLRYAHQGGMNPPVIVVHGNSLEHVSDAYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|378823405|ref|ZP_09846045.1| ribosome biogenesis GTPase Der [Sutterella parvirubra YIT 11816]
gi|378597776|gb|EHY31024.1| ribosome biogenesis GTPase Der [Sutterella parvirubra YIT 11816]
Length = 487
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/419 (48%), Positives = 299/419 (71%), Gaps = 3/419 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+VA+YPGLTRDR YG+G +G + ++++DTGGF
Sbjct: 41 MLPVIALVGRPNVGKSTLFNRLTRSRDAIVADYPGLTRDRQYGQGRVGPRPYLVVDTGGF 100
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP +GI+ M Q + AI E+D+++F+ D R GL D I LR SG+ + L++NK
Sbjct: 101 EPVKSEGIVQAMAGQAELAIEEADVVLFVCDARAGLTPHDARIAQRLRVSGRKVFLLVNK 160
Query: 121 SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+E ++ +FYELG+G P++ISA +G G++ ++ L +E + + + +E + +
Sbjct: 161 AEGLSDVAKAEFYELGLGEPYLISAAHGQGVRAVID--LALE-GFPEEEEDEEPEDPDAP 217
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ +KV + G+PN GKSTLIN+L+GE R+I +D PGTTRD+IK FEYN + Y L+DTAG+
Sbjct: 218 KRLKVTLAGRPNAGKSTLINALIGEERLIAFDMPGTTRDAIKVDFEYNGRPYELVDTAGL 277
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K FE IEKFSV+KTL++I ANVVIL++DA+ I+ D +IA ++ ESGR+L+V V
Sbjct: 278 RKKGKVFEAIEKFSVVKTLQAIDGANVVILVIDAKNGIADHDAHIAGYVLESGRALVVAV 337
Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD + +R++ +++KL+FL +A ISA+K N +N M++++ + ++ +
Sbjct: 338 NKWDLMSEYEREMFGLELERKLHFLRWARMIRISALKRNGLNHLMKAVDEAHAAAYRKIP 397
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRAL+ A++ P R + RPK R+AHQGG NPP+IV+HGN L+ IG Y+RYLE
Sbjct: 398 TPKLTRALLEAVERQQPPRARGGRPKPRFAHQGGSNPPVIVVHGNALEDIGESYRRYLE 456
>gi|422348558|ref|ZP_16429451.1| ribosome-associated GTPase EngA [Sutterella wadsworthensis
2_1_59BFAA]
gi|404659192|gb|EKB32047.1| ribosome-associated GTPase EngA [Sutterella wadsworthensis
2_1_59BFAA]
Length = 448
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/419 (48%), Positives = 301/419 (71%), Gaps = 3/419 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+VA++PGLTRDR YG+G +G+ +I++DTGGF
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRSRDAIVADFPGLTRDRQYGQGRVGRMPYIVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP +GI+ M Q + AI E+D++IF+ D R GL D+ I LR+SG+ ++LV+NK
Sbjct: 61 EPVKSEGIVKAMASQAELAIDEADVVIFVCDARSGLTPHDQRIAVRLRQSGRKVILVVNK 120
Query: 121 SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+E +++ + +FYELG G P +ISA +G G+ ++ L +E +++ + +E + +
Sbjct: 121 AEGLSAVAAAEFYELGFGEPWLISAAHGQGVNAVMD--LALE-GFEEEPEDEEDDDPDAP 177
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ +KV + G+PN GKSTLIN+L+GE R+I +D PGTTRD+I+ FEYN + Y L+DTAG+
Sbjct: 178 KRLKVTLAGRPNAGKSTLINALIGEERLIAFDMPGTTRDAIRVDFEYNGRPYELVDTAGL 237
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K FE IEKFSV+KTL++I +ANVVIL++DA+ I+ D +IA ++ +SGR+L+V V
Sbjct: 238 RKKGKVFEAIEKFSVVKTLQAIEDANVVILVVDAKNGIADHDAHIAGYVLDSGRALVVAV 297
Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD + R++ +++KL+FL +A ISA+K N +N M++++ + ++ +
Sbjct: 298 NKWDLMSDYDREMFNLELERKLHFLRWARMIRISALKRNGLNHLMKAVDEAHAAAYRKIP 357
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TRAL A++ P R + RPK R+AHQGG NPP+IVIHGN L+ IG Y+RYLE
Sbjct: 358 TPKLTRALFEAVERQQPPRARGGRPKPRFAHQGGSNPPVIVIHGNALEDIGESYRRYLE 416
>gi|334129946|ref|ZP_08503749.1| GTP-binding protein EngA [Methyloversatilis universalis FAM5]
gi|333444982|gb|EGK72925.1| GTP-binding protein EngA [Methyloversatilis universalis FAM5]
Length = 430
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/408 (49%), Positives = 295/408 (72%), Gaps = 9/408 (2%)
Query: 13 VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
+GKSTLFNRLT +RDALVA++PGLTRDRHYG G +G + F+++DTGGFEP + GIM EM
Sbjct: 1 MGKSTLFNRLTKTRDALVADFPGLTRDRHYGNGRLGDRPFLVVDTGGFEPTARDGIMVEM 60
Query: 73 TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINSSI-SLD 131
+Q +QAI E+D+++FIVDGR GL D+ I LR++G+P+VL +NK+E + I + +
Sbjct: 61 AQQAEQAIAEADVLVFIVDGRAGLTAHDREIAARLRRAGKPLVLAVNKAEGMRREIVAAE 120
Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKP 191
F+ELG+G+ H+IS+ +G G++N +E L P+ + ++ + K+A+ G+P
Sbjct: 121 FHELGLGDIHVISSAHGEGVRNLVEVCLA---PFPLDPEDED-----DLRGPKIAVAGRP 172
Query: 192 NVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIE 251
NVGKSTLIN+LLGE RVI +D GTTRD+I F+ K+Y LIDTAG+RR+ + FE IE
Sbjct: 173 NVGKSTLINALLGEERVIAFDQAGTTRDAISIPFQRGGKEYTLIDTAGLRRKGRVFESIE 232
Query: 252 KFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQR 311
KFSVIKT+++I ++N+ IL+LDA Q +S QD +I FI ESGR+L++ +NKWD++ +R
Sbjct: 233 KFSVIKTVQAIEQSNICILVLDATQEVSDQDAHIGGFIVESGRALVLVINKWDAVDSYRR 292
Query: 312 KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISA 371
+I K + +KL+FL FA +ISA++ ++ +++ Y +++I L T R+TRAL +A
Sbjct: 293 EIFKREVARKLSFLGFARQLYISALEGQGVSGIFGAVDAAYAAAMIKLPTPRLTRALQAA 352
Query: 372 IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
++ P + L RPK+RYAHQGG NPP+IVIHG L+++ + Y+R+LE
Sbjct: 353 VEKQAPPKHGLFRPKMRYAHQGGMNPPVIVIHGTALEHVSDSYRRFLE 400
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P + + GRPNVGKSTL N L + + G TRD G K + +IDT G
Sbjct: 164 PKIAVAGRPNVGKSTLINALLGEERVIAFDQAGTTRDAISIPFQRGGKEYTLIDTAGLR- 222
Query: 63 EVKKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
+KG + E + +T QAI +S+I I ++D Q + +QD I F+ +SG+ +VLV
Sbjct: 223 --RKGRVFESIEKFSVIKTVQAIEQSNICILVLDATQEVSDQDAHIGGFIVESGRALVLV 280
Query: 118 INKSENINS--------SISLDFYELGIGNPHIISALYGNGIKN 153
INK + ++S ++ LG ISAL G G+
Sbjct: 281 INKWDAVDSYRREIFKREVARKLSFLGFARQLYISALEGQGVSG 324
>gi|222110307|ref|YP_002552571.1| GTP-binding protein enga [Acidovorax ebreus TPSY]
gi|254783151|sp|B9MFY0.1|DER_ACIET RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|221729751|gb|ACM32571.1| Miro domain protein [Acidovorax ebreus TPSY]
Length = 447
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/421 (51%), Positives = 298/421 (70%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGRQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM +QT+QA+ E+D+++F+VD R GL QD I N+LR+ G+P VL NK
Sbjct: 61 EPDASSGIYREMARQTQQAVAEADVVVFVVDVRGGLSAQDHDIANYLRRLGKPCVLAGNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
+E + S+ L +FYELG+G H +SA +G G+++ ++ L + LP + N+
Sbjct: 121 AEGMQDSMHLAEFYELGLGEVHPVSAAHGQGVRSLVDLALKPLALPEIEEEDAAAEKNV- 179
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +K+ LIDTA
Sbjct: 180 ----IRLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQKFELIDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVI 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ R+ ++ +I+ +L+FL FA +FISA K I SI Y S+
Sbjct: 296 AVNKWDAVDDYGRQQLERSIETRLSFLKFAPLHFISAKKRQGIGPLWSSIIQAYKSANRK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +TR L A++ P R + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MPTPVLTRLLQEAVQFQSPKRSGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|337279536|ref|YP_004619008.1| GTP-binding protein engA [Ramlibacter tataouinensis TTB310]
gi|334730613|gb|AEG92989.1| candidate GTP-binding protein engA [Ramlibacter tataouinensis
TTB310]
Length = 462
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/421 (50%), Positives = 294/421 (69%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G+ FI+IDTGGF
Sbjct: 18 MKPVMALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNARQGRHEFIVIDTGGF 77
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + GI EM KQT+QA+ E+D+++F+VD R GL QD I +LRK G+P VL NK
Sbjct: 78 EPTAEGGIYMEMAKQTRQAVAEADVVVFVVDARGGLSAQDHDIAGYLRKLGKPTVLAANK 137
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-ELPYKKFFKKKEFTNIH 178
+E + L +FYELG+G +SA +G GI++ ++ L + +LP + E
Sbjct: 138 AEGMQEGAQLAEFYELGLGEVLPVSAAHGQGIRSLVDTALGLLQLP-----EPGEEGEAG 192
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE +K+ LIDTA
Sbjct: 193 PDGTIKLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFERAGQKFELIDTA 252
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ + FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 253 GLRRKGRVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 312
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR+ ++ I+ +L FL FA +FISA K + +SI + S+ +
Sbjct: 313 AVNKWDAVDDYQREQLQRQIESRLAFLKFAKLHFISARKRQGLGPVWQSIAEAHRSATVK 372
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +TR L+ A++ P R + RPKLRYAHQGG NPP+IV+HGN L+++ + YKR+L
Sbjct: 373 MPTPVLTRLLLEAVQFQSPKRAGMFRPKLRYAHQGGMNPPVIVVHGNSLEHVTDAYKRFL 432
Query: 419 E 419
E
Sbjct: 433 E 433
>gi|121593586|ref|YP_985482.1| GTP-binding protein EngA [Acidovorax sp. JS42]
gi|166224299|sp|A1W581.1|DER_ACISJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|120605666|gb|ABM41406.1| small GTP-binding protein [Acidovorax sp. JS42]
Length = 447
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/421 (51%), Positives = 297/421 (70%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGRQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM +QT+QA+ E+D+++F+VD R GL QD I N+LR+ G+P VL NK
Sbjct: 61 EPDASSGIYREMARQTQQAVAEADVVVFVVDVRGGLSAQDHDIANYLRRLGKPCVLAGNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
+E + S+ L +FYELG+G H +SA +G G+++ ++ L + LP + N+
Sbjct: 121 AEGMQDSMHLAEFYELGLGEVHPVSAAHGQGVRSLVDLALKPLALPEIEEEDAAAEKNV- 179
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +K+ LIDTA
Sbjct: 180 ----IRLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQKFELIDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVI 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ R+ ++ +I+ L+FL FA +FISA K I SI Y S+
Sbjct: 296 AVNKWDAVDDYGRQQLERSIETCLSFLKFAPLHFISAKKRQGIGPLWSSIIQAYKSANRK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +TR L A++ P R + RPK+RYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MPTPVLTRLLQEAVQFQSPKRSGMFRPKMRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|395003895|ref|ZP_10387992.1| ribosome-associated GTPase EngA [Acidovorax sp. CF316]
gi|394318179|gb|EJE54639.1| ribosome-associated GTPase EngA [Acidovorax sp. CF316]
Length = 447
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/421 (51%), Positives = 302/421 (71%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNGKQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D+++F+VD R G+ QD I N+LR+ +P VLV NK
Sbjct: 61 EPDASTGIYREMAKQTQQAVAEADVVVFVVDARAGVSAQDHDIANYLRRLSKPCVLVANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E + + L +FYELG+G +SA +G GI++ +E L + LP + + ++
Sbjct: 121 AEGMVEGVQLAEFYELGLGEVFPVSAAHGQGIRSLVEIALEPLNLPDPD---EADASDDK 177
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
S+ IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE N +++ L+DTA
Sbjct: 178 SV--IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAITVPFERNGQRFELVDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 236 GLRRKGKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVL 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR +++ +I+ +L+FL FA +FISA K + SI + ++
Sbjct: 296 AVNKWDAVDEYQRTLLERSIESRLSFLKFASMHFISAKKRQGLGPLWTSIVQAHKAATCK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST +TR L+ A++ P R + RPKLRYAHQGG NPP+IVIHGN L+++ + YKR+L
Sbjct: 356 MSTPVLTRLLLEAVQFQAPKRSGMFRPKLRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|451823100|ref|YP_007459374.1| GTP-binding protein [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
gi|451775900|gb|AGF46941.1| GTP-binding protein [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
Length = 444
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/420 (51%), Positives = 298/420 (70%), Gaps = 7/420 (1%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGR NVGKSTLFNRLT +R+A+VA++PGLTRDRHYGE I FI+IDTGG E
Sbjct: 4 KPVISLVGRTNVGKSTLFNRLTKTRNAIVADFPGLTRDRHYGEANIAFHKFIVIDTGGLE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLVINK 120
P K ++ QT QAI+ESD+IIF++D R G+ QD I LRK + + I + INK
Sbjct: 64 PNSKDVFSAKIASQTNQAILESDVIIFLLDARSGICNQDYEIAKMLRKIANKRIFMAINK 123
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
SE ++ DFY++G+G P++IS+ +G+GI N E+ L+ + P + +N
Sbjct: 124 SEGMSLEKFDSDFYKMGLGKPYLISSSHGDGIYNLFESALS-DFPTENDLDIDPPSN--- 179
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++AIVGKPNVGKSTLINS++GE R+I +D PGTT+DSI F ++ Y+L+DTAG
Sbjct: 180 -NNIRLAIVGKPNVGKSTLINSIIGEERLIAFDMPGTTKDSIDVDFSIKDRNYVLVDTAG 238
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR+++K F+ +EKFSV+KTL+SI +NVV+L+LDA +IS QD +IA FI ESG+++++
Sbjct: 239 IRKKSKVFDYVEKFSVVKTLQSIESSNVVLLVLDACSDISEQDAHIAGFILESGKAIVIA 298
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NK DS+ + K I+ ++K++FLSFA + ISAIK NI S +SIN Y+S+ +L
Sbjct: 299 INKCDSVKPEEMKNIERTFQRKMHFLSFARMHMISAIKKYNIRSLFDSINEAYESTFANL 358
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST +I R L A++ PP +K ++RPK+RYAHQGG+NPP+IVIHGN L I Y R+LE
Sbjct: 359 STPKINRLLKLAVEKQPPPKKNILRPKMRYAHQGGQNPPVIVIHGNSLDLIPKSYVRFLE 418
>gi|451811518|ref|YP_007447973.1| GTP-binding protein [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|451776676|gb|AGF47675.1| GTP-binding protein [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 445
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/423 (51%), Positives = 306/423 (72%), Gaps = 12/423 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGR NVGKSTLFNRLT +++ALVA++PGLTRDRHYGE + +FI+IDTGG +
Sbjct: 4 KPIVSIVGRANVGKSTLFNRLTKTKNALVADFPGLTRDRHYGEAHFASYNFIVIDTGGLD 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLVINK 120
K ++ QT QAI+ESDIIIF++DGR G+ QD I LRK S + I+L INK
Sbjct: 64 VHSKDQFSLKIASQTNQAILESDIIIFLLDGRSGICSQDYEIAKLLRKFSDKRILLAINK 123
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTN--- 176
SE +N S+ S +FYELG+G P++IS+ +G+GI + +E+ L+ F + +
Sbjct: 124 SEGMNLSNFSNEFYELGLGKPYLISSSHGDGIYHLIEDSLS-------GFSQTDVDENSI 176
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ S IK+AI+GKPNVGKSTLINS LGE R+I +D PGTT+DSI F+++++KYIL+D
Sbjct: 177 VESNSSIKLAIIGKPNVGKSTLINSFLGEERLIAFDMPGTTKDSINVDFKFDDRKYILVD 236
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RR+++ IEKFSVIKT+++I ++VV+L++DA + IS QD ++A FI ESG+++
Sbjct: 237 TAGMRRKSRVINYIEKFSVIKTIQAIESSDVVLLVIDANEEISDQDAHMAGFILESGKAI 296
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
++ NK D+I + K ++ + ++K++FLSFA + ISA+K +IN SIN YDSS
Sbjct: 297 VIAFNKCDTIEKEKLKNLEKSFRRKMHFLSFAKLHMISALKKYHINDIFYSINEAYDSSF 356
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+LST ++ + L AI PP +K +IRPK+RYAHQGG+NPPIIVIHGN L++I + Y R
Sbjct: 357 ANLSTPKLNKLLKIAITKQPPPKKNIIRPKMRYAHQGGQNPPIIVIHGNSLEHISSSYIR 416
Query: 417 YLE 419
YLE
Sbjct: 417 YLE 419
>gi|160900447|ref|YP_001566029.1| GTP-binding protein EngA [Delftia acidovorans SPH-1]
gi|333913255|ref|YP_004486987.1| ribosome-associated GTPase EngA [Delftia sp. Cs1-4]
gi|238687162|sp|A9BMU9.1|DER_DELAS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|160366031|gb|ABX37644.1| small GTP-binding protein [Delftia acidovorans SPH-1]
gi|333743455|gb|AEF88632.1| ribosome-associated GTPase EngA [Delftia sp. Cs1-4]
Length = 448
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/421 (49%), Positives = 302/421 (71%), Gaps = 5/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+G GK +I+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGQGRQGKHEYIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM +QT+QA+ E+D+++F+VD R G+ QD I +LR+ G+P VLV NK
Sbjct: 61 EPDASSGIFKEMARQTQQAVAEADVVVFVVDARLGMSAQDHDIAKYLRRLGKPCVLVANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
+E + + L +FYELG+G+ +SA +G G+++ L+ L + LP + + F ++
Sbjct: 121 AEGMKEGVQLTEFYELGLGDVLPVSAAHGQGVRDLLDLALGQLNLPEPE--EDDPFDDV- 177
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ + I++ + G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE +K+ LIDTA
Sbjct: 178 AQKPIRLTVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERAGQKFELIDTA 237
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ + FE IEKFSV+KTL++I ANVV+LL+DA Q ++ QD +IA ++ ESGR++++
Sbjct: 238 GLRRKGRVFEAIEKFSVVKTLQAIESANVVLLLIDATQGVTDQDAHIAGYVLESGRAVVL 297
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR++++ +I+ +L+FL FA +FISA K + SI + ++
Sbjct: 298 AVNKWDAVDDYQRQMLERSIETRLSFLKFAPMHFISAEKRQGLGPLWNSIIQAHKAATCK 357
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T +TR L+ A++ P + + RPK+RYAHQGG NPP+IVIHGN L+++ YKR+L
Sbjct: 358 MPTPVLTRLLMEAVQFQTPKKTGIYRPKMRYAHQGGMNPPVIVIHGNSLEHVTEAYKRFL 417
Query: 419 E 419
E
Sbjct: 418 E 418
>gi|171059545|ref|YP_001791894.1| GTP-binding protein EngA [Leptothrix cholodnii SP-6]
gi|238689085|sp|B1XXK9.1|DER_LEPCP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|170776990|gb|ACB35129.1| small GTP-binding protein [Leptothrix cholodnii SP-6]
Length = 448
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/420 (48%), Positives = 294/420 (70%), Gaps = 3/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ +VGRPNVGKSTLFNRLT RDA+VA++ GLTRDRHYG+G + FI+IDTGGF
Sbjct: 1 MKPVIAIVGRPNVGKSTLFNRLTGRRDAIVADFAGLTRDRHYGDGKLDNHEFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D ++F+VD R GL QD I +LR +G+ ++L NK
Sbjct: 61 EPDSTSGIYKEMAKQTRQAVAEADAVVFVVDVRAGLSAQDHDIARYLRATGKRVLLAANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + L +FYELG+G P +S+ +G G+++ +E + +E ++
Sbjct: 121 AEGMKDGPQLAEFYELGMGEPLAVSSAHGQGVRSLIE--MALEGIEPPEPEEGYSEEELR 178
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE +KKY LIDTAG
Sbjct: 179 NRPTRLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAIHVPFERGDKKYELIDTAG 238
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K FE IEKFSV+KTL++I +ANVV+LL+DA + +S QD +IA ++ ++GR++++
Sbjct: 239 LRRKGKVFESIEKFSVVKTLQAISDANVVLLLIDATEGVSDQDAHIAGYVLDAGRAVVIA 298
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD+I QR+ ++ +I+++L FL FA ISA K + ++I+ + S+ L
Sbjct: 299 INKWDAIDSYQRETLQRSIEQRLAFLKFAPVLMISAKKRQGLGPLWKAIDDAWASATRKL 358
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T ++TR L+ A++ P R +RPKLRYAHQGG+NPPIIVIHGN ++++ YKRYLE
Sbjct: 359 PTPQLTRLLLEAVEYQQPKRAGAVRPKLRYAHQGGQNPPIIVIHGNAVEHVTEVYKRYLE 418
>gi|260221255|emb|CBA29636.1| GTP-binding protein engA [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 445
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/423 (49%), Positives = 297/423 (70%), Gaps = 11/423 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDA+VA+Y GLTRDRHYG G GK+ FI+IDTGGF
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKTRDAIVADYAGLTRDRHYGNGKHGKQEFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ E+D+++F+VD R GL QD I N+LRK G+P ++V NK
Sbjct: 61 EPDAGSGIFKEMAKQTRQAVAEADVVVFVVDARAGLSAQDHDIGNYLRKLGKPCLVVANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLE---NILTIELPYKKFFKKKEFTN 176
+E + + L +F+ELG+G +SA +G G+++ +E + L +E P ++
Sbjct: 121 AEGMKAGSQLAEFFELGLGEVFPVSAAHGQGMRSLIEMALDALHLEEP-------EDDPE 173
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
IK+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE +K+ L+D
Sbjct: 174 PSDPSVIKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFEREGQKFELVD 233
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R++ K FE IEKFSV+KTL++I A+VV+LL+DA+Q ++ QD +IA +I ESGR++
Sbjct: 234 TAGLRKKGKVFEAIEKFSVVKTLQAIESASVVLLLIDAEQGVTDQDAHIAGYILESGRAV 293
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+V VNKWD+I QR+++K +++ +L FL FA + ISA K + +I + ++
Sbjct: 294 VVAVNKWDAIDEYQRELVKRSLETRLGFLKFAALHLISAKKRQGLGPLWGAIAQAHKAAN 353
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ T +TR L+ A++ P + RPKLRYAHQGG NPPIIVIHGN L+++ YKR
Sbjct: 354 CKMPTPVLTRLLLEAVQFQTPKKTGAYRPKLRYAHQGGMNPPIIVIHGNSLEHVTEAYKR 413
Query: 417 YLE 419
+LE
Sbjct: 414 FLE 416
>gi|326794518|ref|YP_004312338.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1]
gi|326545282|gb|ADZ90502.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1]
Length = 445
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/421 (46%), Positives = 298/421 (70%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA+YPGLTRDR YG+G +G+ FI+IDTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTKSRDALVADYPGLTRDRKYGDGKLGEHDFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M Q+ QAI E+D ++F+VDGR GL D++I N LR+S +P LV+NK
Sbjct: 61 TGD-EQGIDEKMASQSLQAIEEADAVLFLVDGRHGLNPADEMIANHLRRSSKPTYLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-KKFFKKKEFTNIH 178
++ IN I+L DFY +G+G+ + I+A +G G+++ ++ L P+ ++ + ++ +
Sbjct: 120 TDGINEDIALADFYSVGLGSLYPIAAAHGKGVRSLIDTALA---PFAEQVAEARDQIQLE 176
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
S + I++ +VG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+ ++ ++K+Y LIDTA
Sbjct: 177 S-KGIRIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYQRHDKEYTLIDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR E +EKFS++KTL++I +ANVVI ++DA +++ QD+++ ++ ++GR L++
Sbjct: 236 GVRRRKHVKEAVEKFSIVKTLQAIQDANVVICVIDAHEDLVEQDLHMIGYVLDAGRGLVI 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + ++R+ IK ++++L F+ +A ++ISA+ + ++I YDS
Sbjct: 296 AINKWDGMQKDEREHIKKEVERRLGFVPYAKVHYISALHGTAVGDLYDTIEETYDSCYSK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+R+T+ L A+ H P K R KLRYAHQGG NPP IV+HGN+ + YKRYL
Sbjct: 356 WSTNRLTKILEDAVSEHQPPMVKGRRIKLRYAHQGGSNPPRIVVHGNQTDALPGSYKRYL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|375106257|ref|ZP_09752518.1| ribosome-associated GTPase EngA [Burkholderiales bacterium
JOSHI_001]
gi|374666988|gb|EHR71773.1| ribosome-associated GTPase EngA [Burkholderiales bacterium
JOSHI_001]
Length = 447
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/420 (49%), Positives = 300/420 (71%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPVL LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG+ +G FI+IDTGGF
Sbjct: 1 MKPVLALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGDAKLGGHEFIVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE GI+ EM +QT+QA+ E+D+++F+VD R GL QD I +LR + ++L +NK
Sbjct: 61 EPENPTGIVKEMARQTRQAVAEADVVVFVVDARAGLSAQDHDIARYLRSVNKRVLLAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + S + +F+ELGIG+P+ +SA +G GI++ + L + + +E +
Sbjct: 121 AEGMLESPQVAEFHELGIGDPNPVSAAHGQGIRSLADAALEL---LNLPDEPEEEVEEAA 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++A+ G+PNVGKSTLIN+ LGE R+I +D PGTTRD+I FE N K++ LIDTAG
Sbjct: 178 DKPIRLAVAGRPNVGKSTLINAWLGEERLIAFDMPGTTRDAIHVPFERNGKRFELIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K FE IEKFSV+KTL++I +ANVV+L++DA Q +S QD +IA +I ESGR++++
Sbjct: 238 LRRKGKVFEAIEKFSVVKTLQAIADANVVVLMVDATQGVSEQDAHIAGYILESGRAVVIA 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD++ QR++ ++++++ FL FA ISAIK + ++I+ + S+ +
Sbjct: 298 VNKWDAVDAYQREMFNRSLEQRMAFLRFADVLHISAIKRAGLAPLWKAISAAHASATCKM 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T +TR + A+++ P R + RPKLRYAHQGG NPPI+V+HGN L++I + YKR+LE
Sbjct: 358 PTPVLTRLVQEAVEHQAPRRAGMFRPKLRYAHQGGMNPPIVVVHGNALEHITDTYKRFLE 417
>gi|390951008|ref|YP_006414767.1| ribosome-associated GTPase EngA [Thiocystis violascens DSM 198]
gi|390427577|gb|AFL74642.1| ribosome-associated GTPase EngA [Thiocystis violascens DSM 198]
Length = 465
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/419 (48%), Positives = 285/419 (68%), Gaps = 7/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ L+GRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG G IG K ++I+DTGG
Sbjct: 1 MLPVITLIGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRQYGVGQIGPKPYVIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+G+ M +Q +AI E+D ++F+VD R G +D I+ LR+ G+PI LV+NK
Sbjct: 61 G-TAPEGVEALMERQVLRAIDEADHLLFMVDARDGCSPEDIEISQRLRRLGKPITLVVNK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
S++ + + + DF+ LG+G+P +S+ GNG++ ++ + +LP + E T
Sbjct: 120 SDSTDPTFATADFHRLGLGDPWPVSSTQGNGVRELIDRVFE-QLPEAEGSIDGEDTQ--- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E I+VA+VG+PN GKSTLIN LLGE R++T+D PGTTRDSI FE + Y LIDTAG
Sbjct: 176 -EGIRVAVVGRPNAGKSTLINRLLGEERLVTFDLPGTTRDSIFIPFERLGRHYTLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + E IEKFSVIKTL++I ANV+IL++DA Q I QD +A I ESGR+L+V
Sbjct: 235 LRRRARVHEAIEKFSVIKTLQAIAAANVIILVIDAHQGIGEQDATLAGHIIESGRALVVA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +QR+ +K+ ++KL FL FA + ISA+ + + ++ + H Y ++ L
Sbjct: 295 INKWDGLDTDQREQVKSQFQRKLAFLDFAKLHLISALHGSGVGLLLDEVEHAYANATRDL 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +TR L +A++ H P R KLRYAHQGG+NPPIIVIHGN+ + + Y+RYL
Sbjct: 355 GTPVLTRLLEAAVQEHQPPIVHGRRIKLRYAHQGGRNPPIIVIHGNQTEAVPETYRRYL 413
>gi|329904161|ref|ZP_08273691.1| GTP-binding protein EngA [Oxalobacteraceae bacterium IMCC9480]
gi|327548117|gb|EGF32835.1| GTP-binding protein EngA [Oxalobacteraceae bacterium IMCC9480]
Length = 340
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/343 (55%), Positives = 265/343 (77%), Gaps = 4/343 (1%)
Query: 47 IGKKSFIIIDTGGFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNF 106
+G++ F++IDTGGFEP K+GIMHEM KQT+QA+ E+D++IFIVDGRQG+ DK IT+F
Sbjct: 1 MGERPFLVIDTGGFEPVAKEGIMHEMAKQTRQAVAEADMVIFIVDGRQGMTPHDKTITDF 60
Query: 107 LRKSGQPIVLVINKSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY 165
LRKSG+ ++LV+NK+E + S+++ DFYELG+G+P++ISA +G+G+ + +E L + L
Sbjct: 61 LRKSGRQVMLVVNKAEGMRYSAVTADFYELGMGDPYVISAAHGDGVMDLVEEALNLALAQ 120
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
K E + + I++AIVG+PNVGKST++N+LLGE RVI +D PGTTRDSI+ F
Sbjct: 121 KPV---DEEVAVDLGKAIRIAIVGRPNVGKSTMVNTLLGEERVIAFDMPGTTRDSIEIPF 177
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E + ++Y LIDTAGIRRR K FE IEKFSV+KTL+SI EANVV+LLLDAQQ+IS QD +I
Sbjct: 178 ERSGQQYTLIDTAGIRRRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDISEQDAHI 237
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
A FI ESGR+L+V VNKWD + ++R IK ++ +KL+FLSFA F++ISA+K ++ M
Sbjct: 238 AGFILESGRALVVGVNKWDGLTSSRRDEIKIDLDRKLDFLSFAKFHYISALKATGVDQLM 297
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLR 388
+SIN Y +++ LST ++TRALI A+++ P RK IRPKLR
Sbjct: 298 KSINSAYAAAMSDLSTPKLTRALIEAVEHQQPRRKGSIRPKLR 340
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 20/169 (11%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKST+ N L + + PG TRD + + +IDT G
Sbjct: 137 IAIVGRPNVGKSTMVNTLLGEERVIAFDMPGTTRDSIEIPFERSGQQYTLIDTAGIR--- 193
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
++G + E + +T Q+I E+++++ ++D +Q + EQD I F+ +SG+ +V+ +N
Sbjct: 194 RRGKVFEAIEKFSVVKTLQSISEANVVLLLLDAQQDISEQDAHIAGFILESGRALVVGVN 253
Query: 120 KSENINSS----------ISLDFYELGIGNPHIISALYGNGIKNFLENI 158
K + + SS LDF L H ISAL G+ +++I
Sbjct: 254 KWDGLTSSRRDEIKIDLDRKLDF--LSFAKFHYISALKATGVDQLMKSI 300
>gi|335043517|ref|ZP_08536544.1| putative GTPase [Methylophaga aminisulfidivorans MP]
gi|333790131|gb|EGL56013.1| putative GTPase [Methylophaga aminisulfidivorans MP]
Length = 468
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/420 (50%), Positives = 284/420 (67%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKST+FNRLT SRDALVA+Y GLTRDR YG+ FI+IDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTIFNRLTRSRDALVADYAGLTRDRIYGKVKEPGFDFILIDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + M KQ K AI E+D+I+FIVDGR GL+ D + LR G+P+ LVINK
Sbjct: 61 TDQTDN-MSDLMRKQAKLAIDEADLILFIVDGRAGLMPTDSDVAQQLRNDGKPVCLVINK 119
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E I S +FY LG+G P +ISA G GI + L I +P + + E +
Sbjct: 120 TEGERREIISAEFYALGLGEPQVISATQGRGIDSLLAEIKQ-RIPAVEKIEADE-AEVFD 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++A++G+PNVGKSTLIN LLGE RV+ +D PGTTRDSI FE + Y LIDTAG
Sbjct: 178 ENEIRLAVLGRPNVGKSTLINRLLGEERVVAFDEPGTTRDSIHIPFEKDGVNYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR+K E +EKFSV+KTL+++ +ANVV+L+LDA + I QD+++A I ESGR++++
Sbjct: 238 VRRRSKVSEKLEKFSVLKTLQALEDANVVMLVLDAHEGIVEQDLHLAGLIVESGRAVVIA 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + ++R+ + NI+++L FL+FA +FISA+ + + +S+ + S++ +
Sbjct: 298 VNKWDGLEKSEREWVTTNIERRLPFLNFAKTHFISALHGSGVGLLFKSVRQAFQSAMTKV 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
TSR+TR L AI +HPP + R K RYAH GGKNPP I+IHGN+ + N YKRYLE
Sbjct: 358 PTSRLTRVLEDAIADHPPPLVRGRRIKFRYAHLGGKNPPRIIIHGNQTESTPNSYKRYLE 417
>gi|254492694|ref|ZP_05105865.1| putative GTPase [Methylophaga thiooxidans DMS010]
gi|224462215|gb|EEF78493.1| putative GTPase [Methylophaga thiooxydans DMS010]
Length = 468
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/421 (48%), Positives = 284/421 (67%), Gaps = 4/421 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKST+FNRLT SRDALVA+Y GLTRDR YG FI+IDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTIFNRLTRSRDALVADYAGLTRDRIYGTVREENLDFILIDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + M KQ K AI E+D+++FIVDGR GL+ D + LR G+P+ LVINK
Sbjct: 61 TDQTDN-MSDLMRKQAKLAIDEADLVLFIVDGRAGLMPSDTDVAQQLRSDGKPVRLVINK 119
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK-FFKKKEFTNIH 178
+E ++ DFY LG+G P +ISA G G LE I + LP + F++++
Sbjct: 120 TEGEQREMVAADFYSLGLGEPQVISATQGRGFTELLEEI-KVCLPQAEVLFEEEDEATDD 178
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I++A++G+PNVGKSTLIN LLGE RV+ +D PGTTRDSI FE + Y LIDTA
Sbjct: 179 RPDDIRLAVLGRPNVGKSTLINRLLGEERVVAFDEPGTTRDSIHIPFEKDGVNYTLIDTA 238
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR+K E +EKFSV+KTL+++ +ANV +L+LDA + I QD+++A I ESGR++++
Sbjct: 239 GVRRRSKVSEKLEKFSVLKTLQALEDANVALLVLDAHEGIVEQDLHLAGLILESGRAVVL 298
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + ++R+ + NI+++L F++FA +FISA+ + + ++++ Y S++
Sbjct: 299 AVNKWDGLEKSEREWVATNIERRLPFMNFAKTHFISALHGSGVGLLLKTVRQAYQSAMTK 358
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ TSR+TR L A+ +H P + R K RYAH GGKNPP I+IHGN+ N YKRYL
Sbjct: 359 VPTSRLTRVLEDAVSDHQPPLVRGRRIKFRYAHLGGKNPPRIIIHGNQTDATPNSYKRYL 418
Query: 419 E 419
E
Sbjct: 419 E 419
>gi|89095338|ref|ZP_01168256.1| GTP-binding protein EngA [Neptuniibacter caesariensis]
gi|89080413|gb|EAR59667.1| GTP-binding protein EngA [Oceanospirillum sp. MED92]
Length = 479
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/423 (46%), Positives = 298/423 (70%), Gaps = 9/423 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG--KKSFIIIDTG 58
M PV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDR YGEG + ++ +I++DTG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRKYGEGRLANEEQDYIVVDTG 60
Query: 59 GFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
G + ++GI +EM KQ+ QA+ E+D+++FIVDGR G+ D++I N+LR+S +P LV+
Sbjct: 61 GITGD-EQGIDYEMAKQSLQAVDEADVVLFIVDGRAGINPADEMIANYLRRSEKPFYLVV 119
Query: 119 NKSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
NK++ +N I + DFYELG G P I+A +G G+ +E +L ++ ++ +
Sbjct: 120 NKTDGLNPDIVVADFYELGFGQPFPIAASHGRGVTQLIEMVLEELPEPEEESQE----TM 175
Query: 178 HSIE-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+E IK+A+VG+PNVGKSTL+N +LGE+RV+ +D GTTRDS+ + ++K Y LID
Sbjct: 176 DEVEKSIKIAVVGRPNVGKSTLVNRMLGEDRVVVFDKAGTTRDSVYIPYVRDDKNYTLID 235
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RRR E EKFS++KTL+++ +A+VV+ ++DA++ ++ QD+++ +F+ ++GRSL
Sbjct: 236 TAGVRRRKNITEAAEKFSIVKTLQAVNDAHVVVFVIDAREGVTEQDMHMLSFVIDTGRSL 295
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
++ +NKWD + ++ +K +++KL F FA +FISA+ +N+ + +S++ Y+ ++
Sbjct: 296 VIALNKWDGMNGEEKARVKEQVERKLEFAEFADMHFISALHGSNVGNMYDSVDEAYEYAM 355
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
STS++TR L + +H P K R KLRYAHQGG NPPIIV+HGN+ + YKR
Sbjct: 356 AKWSTSKLTRLLEDVVADHQPPMVKGRRIKLRYAHQGGSNPPIIVVHGNQTNALPGSYKR 415
Query: 417 YLE 419
YLE
Sbjct: 416 YLE 418
>gi|345863296|ref|ZP_08815508.1| GTP-binding protein EngA [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345125757|gb|EGW55625.1| GTP-binding protein EngA [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 461
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/423 (47%), Positives = 286/423 (67%), Gaps = 19/423 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDR YG G +G ++++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRSRDALVADQPGLTRDRKYGMGRLGPGPYVVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E G+ M +Q +QAI E+D ++ ++D R+G D +I LR++G+P+ V+NK
Sbjct: 61 SGE--DGVDLLMEQQVRQAIGEADHVLLLLDAREGCTGGDAIIAEQLRRTGKPVTAVVNK 118
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNF----LENILTIELPYKKFFKKKEFT 175
SE ++ + +F+ LG+G P I+A +G G+ LE++ +E+P +E
Sbjct: 119 SEGLSRDAAANEFFSLGLGEPKAIAAAHGQGVHGLIVEVLESLPPVEMP-------EELP 171
Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
E I++A+VG+PNVGKSTL+N +LGE RV+ +D PGTTRDSI F +++K Y LI
Sbjct: 172 -----EGIQIAVVGRPNVGKSTLVNRMLGEERVVAFDQPGTTRDSIFIPFVHDDKHYTLI 226
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG+RRR + EVIEKFSVIKTL+++ +ANV +L+LDAQQ + QD N+A I ESGR+
Sbjct: 227 DTAGVRRRARVNEVIEKFSVIKTLQALEQANVALLVLDAQQGVGEQDANLAGHILESGRA 286
Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
L++ +NKWD + QR+ ++ I++KL FL FA ++ISA+ + + ++ Y ++
Sbjct: 287 LVLVINKWDGLDQGQRQQVREEIERKLPFLDFATHHYISALHGSGVGDLYRLVDRAYANA 346
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
L+T +TR L ++ H P + R KLRYAHQGGKNPPIIVIHGN+ +++ + Y+
Sbjct: 347 TRDLATPELTRLLELLVQEHQPPLVRGRRIKLRYAHQGGKNPPIIVIHGNQTEHVPSTYR 406
Query: 416 RYL 418
RYL
Sbjct: 407 RYL 409
>gi|292492503|ref|YP_003527942.1| small GTP-binding protein [Nitrosococcus halophilus Nc4]
gi|291581098|gb|ADE15555.1| small GTP-binding protein [Nitrosococcus halophilus Nc4]
Length = 464
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/419 (47%), Positives = 292/419 (69%), Gaps = 8/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MK ++ LVGRPNVGKSTLFNRLT SRDALVA+ PG+TRDR YG G++SF+++DTGG
Sbjct: 1 MKALVALVGRPNVGKSTLFNRLTRSRDALVADQPGVTRDRKYGIARYGEQSFLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + G+ M Q + AI E+DII+F+VDGR+GL D+ I LR++ +P+ LVINK
Sbjct: 61 T-EQESGVGELMRVQAQLAIEEADIILFLVDGREGLSALDETIAEQLRRAQKPLKLVINK 119
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++ +FY LG+G P ISA G G+ L+++ T+ LP + KE I +
Sbjct: 120 TEGRDQELVASEFYRLGLGEPATISAQQGQGVGGLLQDLSTL-LP----LEGKEEAGIQA 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ A+VG+PNVGKSTL+N LLGE RV++++ PGTTRDSI F + + Y L+DTAG
Sbjct: 175 -RGLQFAVVGRPNVGKSTLVNRLLGEERVLSFEAPGTTRDSIAIPFCHQGQDYTLVDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR+K +++EKFS+ KTL++I A VVIL++DA++ + QD+++A I ESG+++++
Sbjct: 234 IRRRSKILDMLEKFSIAKTLEAIEAAQVVILVIDAREGVVEQDLHLAGLILESGKAVVIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +QR+ +K ++ ++L FL FA +FISA+ + + SI+ Y S+ HL
Sbjct: 294 VNKWDGLSSDQRRKVKADLDRRLPFLDFARVHFISALHGSGVGELFPSIDKAYRSANCHL 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T+ + +AL +A++ HPP K R KLRYAHQGG NPP I+IHG++ + + +YKRYL
Sbjct: 354 PTAELNQALAAAVEKHPPPVVKGRRIKLRYAHQGGHNPPKIIIHGSQAEAVPVNYKRYL 412
>gi|372270400|ref|ZP_09506448.1| GTP-binding protein engA [Marinobacterium stanieri S30]
Length = 477
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/420 (46%), Positives = 287/420 (68%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA+ PGLTRDR YGEG +G +I+IDTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRKYGEGRLGNCDYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + GI M +Q+ QAI E++I++F+VDGR GL D++I + LR+ + LV+NK
Sbjct: 61 SGD-EDGIDQRMAEQSLQAIDEANIVLFLVDGRAGLNPADEMIADHLRRQEKECWLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ I+ +++ DFY LGIG P I+A +G + ++ +L P+ ++
Sbjct: 120 TDGIDPDVAMADFYALGIGQPVPIAASHGRNVTMLMDEVLA---PFIVEEDEEAEGEQEH 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++AIVG+PNVGKSTL+N +LGE+RV+ YD GTTRDSI +E + + Y LIDTAG
Sbjct: 177 DDSIRIAIVGRPNVGKSTLVNRMLGEDRVVVYDQAGTTRDSIYIPYERDGQDYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E +EKFS++KTL++I +ANVV+ ++DA++ ++ QD+++ F+ +SGR+L+V
Sbjct: 237 VRRRKNIKEAVEKFSIVKTLQAIKDANVVVSVIDAREGVTEQDLSMLGFVIDSGRALVVT 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + R+ +K ++++L F FA F+FISA+ + + +SIN YD ++
Sbjct: 297 LNKWDGMTAEDREHVKTQVERRLEFAGFARFHFISALHGTGVGNLYDSINEAYDCAMAKW 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+++T+ L + +H P R KLRYAHQGG NPPIIV+HGN+ + YKRYLE
Sbjct: 357 STNQLTKLLEDVVADHQPPAVNNRRIKLRYAHQGGSNPPIIVVHGNQTNALPGSYKRYLE 416
>gi|387127022|ref|YP_006295627.1| GTP-binding protein EngA [Methylophaga sp. JAM1]
gi|386274084|gb|AFI83982.1| GTP-binding protein EngA [Methylophaga sp. JAM1]
Length = 469
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/422 (49%), Positives = 289/422 (68%), Gaps = 6/422 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +R+ALVA++ GLTRDR YG + FI+IDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTKTRNALVADHAGLTRDRIYGNARHDEAEFILIDTGGL 60
Query: 61 EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
V+ M + M KQ + AI+E+D+I+F+VDG+ G+V D+LI LR G+P++LVIN
Sbjct: 61 T--VQGDDMSDLMRKQAELAIVEADLILFVVDGKTGVVPADELIAKQLRNVGKPVLLVIN 118
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K+E+ ++ DFY LG+G P +ISA G GI N + N L +LP + + E
Sbjct: 119 KTESEQKELAAADFYRLGLGEPEVISATQGRGISNLM-NTLMRDLPAIRIVETDEEEAEE 177
Query: 179 SIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
I +A+VG+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE + YILIDT
Sbjct: 178 DTSGDICLAVVGRPNVGKSTLVNRLLGEDRVVAFDEPGTTRDSIYIPFEKDGTNYILIDT 237
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR+K E +EKFS++KTL++I ANVV+L+LDA Q + QD+++A I ESGR+++
Sbjct: 238 AGVRRRSKVSEALEKFSIVKTLQAIEAANVVLLVLDAHQGVVDQDLHLAGLIIESGRAVV 297
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ VNKWD + +R+ + NI+++L FLSFA +FISA+ + + ++S+ Y S++
Sbjct: 298 IAVNKWDGLEKQEREWVATNIERRLPFLSFAKTHFISALHGSGVGLLLKSVKRAYGSALA 357
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T ++TR L A+ +H P R K RYAH GGKNPP I+IHGN+ + N Y+RY
Sbjct: 358 KIPTPQLTRVLEEAVADHQPPLVNGRRIKYRYAHLGGKNPPRIIIHGNQTEATPNSYRRY 417
Query: 418 LE 419
LE
Sbjct: 418 LE 419
>gi|333908807|ref|YP_004482393.1| GTP-binding protein engA [Marinomonas posidonica IVIA-Po-181]
gi|333478813|gb|AEF55474.1| GTP-binding protein engA [Marinomonas posidonica IVIA-Po-181]
Length = 446
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/420 (45%), Positives = 293/420 (69%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN+LT SRDALVA+YPGLTRDR YG+G +G FI+IDTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGKVGGHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D ++F+VDGR GL D++I N LR+S +P+ LV+NK
Sbjct: 61 SGD-EQGIDEKMARQSLLAIEEADTVLFLVDGRHGLNPADEMIANHLRRSNKPVTLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ IN I+L DFY LG G I+A +G G+ +++++ LP+ + ++ +
Sbjct: 120 TDGINEDIALADFYSLGFGELQPIAAAHGKGVHVLIDHVM---LPFAEQVEEAKNQIDLD 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++ +VG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+ + ++K+Y LIDTAG
Sbjct: 177 SRGIRIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYLRHDKEYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR E +EKFS++KTL++I +ANVVI+++D+ +++ QD+++ ++ ++GR +++
Sbjct: 237 IRRRKHVKEAVEKFSIVKTLQAIQDANVVIVVIDSHEDLVEQDLHMIGYVLDAGRGVVIA 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++R+ IK+ ++++L F+ +A ++ISA+ + ++I Y+S
Sbjct: 297 INKWDGLQKDEREHIKSEVERRLGFVPYAKVHYISALHGTAVGDLYDTIETTYESCYAKW 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+R+TR L A+ H P R KLRYAHQGG NPP IV+HGN++ + YKRYLE
Sbjct: 357 STNRLTRILEDAVSEHQPPMVNSRRIKLRYAHQGGSNPPRIVVHGNQVNSLPGSYKRYLE 416
>gi|152995389|ref|YP_001340224.1| small GTP-binding protein [Marinomonas sp. MWYL1]
gi|189037150|sp|A6VV10.1|DER_MARMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|150836313|gb|ABR70289.1| small GTP-binding protein [Marinomonas sp. MWYL1]
Length = 445
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/422 (46%), Positives = 295/422 (69%), Gaps = 9/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN+LT SRDALVA+YPGLTRDR YG+G +G+ FI+IDTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+VDGR GL D++I + LR+S + + LV+NK
Sbjct: 61 SGD-EQGIDEKMARQSLLAIEEADVVLFLVDGRHGLNPADEMIASHLRRSNKQVSLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ IN I+L DFY LG G H I+A +G G+ ++ ++ LP+ + + +E N S
Sbjct: 120 TDGINEDIALADFYSLGFGELHPIAASHGKGVHVLIDKVM---LPFAE--RVEEAKNQIS 174
Query: 180 IEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
IE I++ +VG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+ + N+K+Y LIDT
Sbjct: 175 IESRGIRIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYVRNDKEYTLIDT 234
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AGIRRR E +EKFS++K L++I +ANVVI+++D+ +N+ QD+++ ++ ++GR +I
Sbjct: 235 AGIRRRKHVKEAVEKFSIVKALQAIQDANVVIVVIDSHENLVEQDLHMIGYVLDAGRGVI 294
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ +NKWD + + R+ IK+ ++++L F+ +A ++ISA+ + ++I Y+S
Sbjct: 295 IAINKWDGLKKDDREHIKSEVERRLGFVPYAKVHYISALHGTGVGDLYDTIESTYESCYA 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+T+R+TR L +I H P R KLRYAHQGG NPP IV+HGN+ + YKRY
Sbjct: 355 KWTTNRLTRILEDSIAEHQPPMVNSRRIKLRYAHQGGSNPPRIVVHGNQTDSLPGSYKRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|344338106|ref|ZP_08769039.1| GTP-binding protein engA [Thiocapsa marina 5811]
gi|343802160|gb|EGV20101.1| GTP-binding protein engA [Thiocapsa marina 5811]
Length = 466
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/419 (46%), Positives = 281/419 (67%), Gaps = 6/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ L+GRPNVGKSTLFNRLT++RDALVA++PGLTRDR YG G +G ++I+DTGG
Sbjct: 1 MLPVITLIGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRQYGIGVVGPSRYVIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G+ M +Q + AI E+D ++F+VD R G D I LR+ G+P+ LV+NK
Sbjct: 61 SQAID-GVEALMERQVRLAIDEADHLLFLVDARDGCTPGDIEIAARLRRMGKPVSLVVNK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
S+ ++ ++ DF+ LG+G P +SA +G G+++ ++ + P + +
Sbjct: 120 SDTMDPVLATADFHRLGLGEPMAVSATHGRGVQDLIDAVFA-RFP---LVDDEGIGAAET 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E I+VAIVG+PN GKSTLIN +LG++R++T+D+PGTTRDSI FE + Y LIDTAG
Sbjct: 176 EEGIRVAIVGRPNAGKSTLINRILGDDRLVTFDSPGTTRDSIFVPFEQQGRHYTLIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR++ +VIEKFSVIKTL++I ANVVIL+LDA + + QD +A I E GR+L+V
Sbjct: 236 MRRRSRVDDVIEKFSVIKTLQAIDAANVVILVLDAHEGVGEQDATLAGHIIERGRALVVA 295
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +QR+ IK +KL FL FA + +SA+ + + ++ + Y ++ +L
Sbjct: 296 INKWDGLAPDQREQIKTQFARKLAFLDFAKMHLVSALHGSGVGLLLDEVEKAYTNATRNL 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST +TR L A++ H P R KLRYAHQGG+NPPII+IHGN+ + + Y+RYL
Sbjct: 356 STPELTRLLEDAVQEHQPPLVHGRRIKLRYAHQGGRNPPIIIIHGNQTDSVPDTYRRYL 414
>gi|407695036|ref|YP_006819824.1| GTPase Der [Alcanivorax dieselolei B5]
gi|407252374|gb|AFT69481.1| GTPase Der [Alcanivorax dieselolei B5]
Length = 465
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/420 (44%), Positives = 281/420 (66%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+G +G + +I++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGDGRMGDRPYIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E ++GI MT Q A+ E+D ++F+VDGR GL D+ + + LRK +P+ LV+NK
Sbjct: 61 G-ESEEGIDRPMTDQALLAVGEADAVLFMVDGRAGLTAADQQVASELRKLPKPVFLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+ I+A +G G++ ++ +L + + + + E
Sbjct: 120 TDGLDPDSAMADFYALGLTQVLPIAAAHGRGVRALMDEVLAV---FPEPEETGEEEEPED 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++VA++G+PNVGKSTLIN +LGE RV+ +D GTTRDSI+ FE N + Y+LIDTAG
Sbjct: 177 PDTVRVAVLGRPNVGKSTLINRILGEERVVVFDQAGTTRDSIEVPFERNGRPYVLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E IEKFSVIK L+++ A VV+L++DA+ IS QD+++ ++ E+GR+L++
Sbjct: 237 VRRRGKVHETIEKFSVIKALQAVDAAQVVLLVVDARDGISDQDLHLLGYVLEAGRALVIA 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + + + +K + ++L F+ +A FISA+ + + +DS+ I +
Sbjct: 297 MNKWDGLESDHKDWVKQQLDRRLQFVPWAKIKFISALHGTGVGDLFGLVERAWDSAFIKI 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
++ +TR L HPP R R KLRYAH GG NPP++VIHGNR + Y+RYLE
Sbjct: 357 GSNALTRMLEDITHAHPPPRSGRFRAKLRYAHLGGSNPPVVVIHGNRTDSLPVSYRRYLE 416
>gi|304414053|ref|ZP_07395421.1| GTP-binding protein [Candidatus Regiella insecticola LSR1]
gi|304283267|gb|EFL91663.1| GTP-binding protein [Candidatus Regiella insecticola LSR1]
Length = 491
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/441 (46%), Positives = 290/441 (65%), Gaps = 24/441 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN LT +R ALV+++PGLTRDR YG FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNHLTRTRSALVSDFPGLTRDRQYGRAEFESHEFIVIDTGGV 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M Q AI E+DI++FIVDGR G++ D+ IT LR + L++NK
Sbjct: 61 DG-TEQGVETLMASQALLAIEEADIVLFIVDGRAGMLPADQEITQHLRNRQKSTFLLVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
++ INS ++ DFY LG+G + I+A +G G+ LE ++ +P K+
Sbjct: 120 TDGINSDSAIADFYSLGLGEVYAIAASHGRGVAQLLERVMAPFIPAKEPVVLTDEQLNAA 179
Query: 168 -FFKKKEFTNIHSIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTT 217
+ ++E + +E IK+AIVG+PNVGKSTL N +LGE RVI YD PGTT
Sbjct: 180 YWATQEEKNDETGLEEDNFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVIVYDLPGTT 239
Query: 218 RDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN 277
RDSI N ++YILIDTAG+R+R K + +EKFSVIKTLK+I ++NVV+L++DAQ
Sbjct: 240 RDSIYIPMTRNERQYILIDTAGVRKRGKVTQTVEKFSVIKTLKAIEDSNVVLLVIDAQDG 299
Query: 278 ISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIK 337
IS QD+++ FI SGRSL++ +NKWD I R+ +KN + +LNF+ FA +FISA++
Sbjct: 300 ISDQDLSLLGFILNSGRSLVIVINKWDGIQAEDRQRVKNELDLRLNFIDFARIHFISALR 359
Query: 338 LNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNP 397
++ + + +S+ YDSS ++TS +TR + A + HPP R + R KL+YAH GG NP
Sbjct: 360 VSGVGNLFKSVCEAYDSSTKRVNTSLLTRIMQMAEEEHPPARIQGRRVKLKYAHAGGYNP 419
Query: 398 PIIVIHGNRLKYIGNDYKRYL 418
PIIVIHGN++ + + YKRYL
Sbjct: 420 PIIVIHGNQVSSLTDAYKRYL 440
>gi|114319757|ref|YP_741440.1| GTP-binding protein EngA [Alkalilimnicola ehrlichii MLHE-1]
gi|122312352|sp|Q0AB37.1|DER_ALHEH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|114226151|gb|ABI55950.1| small GTP-binding protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 467
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/429 (45%), Positives = 289/429 (67%), Gaps = 21/429 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN+LT SRDALVA++PGLTRDR YG G +G++ +I++DTGG
Sbjct: 1 MDPVIALVGRPNVGKSTLFNQLTRSRDALVADHPGLTRDRQYGVGKVGERPYIVVDTGGL 60
Query: 61 --EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
+PE G+ M +Q AI E+D I+F+VDGR G D+ + LR+ G+P+ LV+
Sbjct: 61 GDDPE---GVEQGMHQQALAAIEEADAILFLVDGRSGPTAADEELAAHLRRQGKPVWLVV 117
Query: 119 NKSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
NK++ ++ ++ +F+ LG+G P I+A +G GI ++++L LP + FT+
Sbjct: 118 NKTDGVDHRLATAEFHALGLGEPLPIAAAHGRGIAGLMDHVLA-GLP-------EGFTSA 169
Query: 178 HSIEYI-------KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
H+ + ++AIVG+PNVGKSTL+N LLGE RV+ YD PGTTRDS+ E + +
Sbjct: 170 HAALQVEEAEGATRIAIVGRPNVGKSTLVNRLLGEERVLVYDMPGTTRDSVFIPLERDGR 229
Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
Y LIDTAG+RRR + E +EKFSVI+TLK++ A+VVIL++DA++ ++ QD ++ +
Sbjct: 230 PYTLIDTAGMRRRARVHETVEKFSVIQTLKAMEAAHVVILVIDAREGVTDQDTHLIGHVL 289
Query: 291 ESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
ESGR+L++ +NKWD + QR+ +K +++KL FL+FA +FISA+ + + +++
Sbjct: 290 ESGRALVLAINKWDGLTAEQREAVKAGLERKLTFLNFARRHFISALHGSGVGLLFGAVDK 349
Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYI 410
+++ L T + L A+ H P + R KLRYAHQGGKNPP+IVIHGN++K +
Sbjct: 350 ALEAARRDLPTPILNEILADAVAAHAPPLVQGRRIKLRYAHQGGKNPPVIVIHGNQVKKL 409
Query: 411 GNDYKRYLE 419
YKRYLE
Sbjct: 410 PGAYKRYLE 418
>gi|358450419|ref|ZP_09160882.1| GTP-binding protein EngA [Marinobacter manganoxydans MnI7-9]
gi|357225350|gb|EHJ03852.1| GTP-binding protein EngA [Marinobacter manganoxydans MnI7-9]
Length = 473
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/420 (46%), Positives = 288/420 (68%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN++T SRDALVA++PGLTRDR YGEG + FI+IDTGG
Sbjct: 1 MTPVIALVGRPNVGKSTLFNQMTRSRDALVADFPGLTRDRKYGEGSYEGQRFIVIDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ EM +Q+ QA+ E+DI++F+VDGR GL D+LI + LR+SG+ LV+NK
Sbjct: 61 TGD-EQGLDLEMARQSMQAVEEADIVLFLVDGRAGLTAGDELIADSLRRSGKQARLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + I+ DFY LG + +I+A + GI++ LE +L E ++ + + I
Sbjct: 120 TDGQDPDIAASDFYSLGFESTFLIAASHNRGIRSMLEILLPSEEEREEEDRADRYPGI-- 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++ +VG+PNVGKSTL+N +LGE RV+ YD PGTTRDS+ +E +Y LIDTAG
Sbjct: 178 ----RIGVVGRPNVGKSTLVNRMLGEERVVVYDMPGTTRDSVHIPYERQGSQYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR EV+EKFS+IKTL++I +A+VVIL++DA++ + QD+++ F+ ++GRSL++
Sbjct: 234 VRRRKNVSEVVEKFSIIKTLQAIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRSLVIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + R +K ++++L+FL +A ++ISA+ + + ES+ Y+S++
Sbjct: 294 VNKWDGMDPEDRARVKEQVQRRLDFLDYADKHYISALHGSGVGVMYESVQACYESAMAKW 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+R+T L AI H P R KLRYAHQGG NPP+IV+HGN++ + YKRYLE
Sbjct: 354 PTNRLTAILQDAIAQHQPPMVHGRRIKLRYAHQGGSNPPVIVVHGNQVDSLPGAYKRYLE 413
>gi|406975066|gb|EKD97949.1| GTP-binding protein engA, partial [uncultured bacterium]
Length = 412
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/386 (49%), Positives = 267/386 (69%), Gaps = 6/386 (1%)
Query: 35 GLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQ 94
GLTRDRHYG G +GK +I+IDTGGFEP+ GI EM KQT+QA+ E+D++IF+VD R
Sbjct: 1 GLTRDRHYGNGKLGKHEYIVIDTGGFEPDASAGIYKEMAKQTRQAVAEADVVIFVVDARA 60
Query: 95 GLVEQDKLITNFLRKSGQPIVLVINKSENINSSISL-DFYELGIGNPHIISALYGNGIKN 153
G+ QD I N+LR+ G+P V+V NK+E + + L +FYELG G +SA +G GI+
Sbjct: 61 GVSAQDHDIANYLRRLGKPCVMVANKAEGMVAGSQLVEFYELGFGEVLAVSAAHGQGIRE 120
Query: 154 FLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
L+ L P + ++ E + IK+A+ G+PNVGKSTLIN LGE R++ +D
Sbjct: 121 LLDLALLPLQPGEDEIQEAEQPGV-----IKLAVAGRPNVGKSTLINVWLGEERLVAFDL 175
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRD+I FE N +K+ LIDTAG+RRR K FE IEKFSV+KTL++I A+VV+LL+D
Sbjct: 176 PGTTRDAISVPFERNGQKFELIDTAGLRRRGKVFEAIEKFSVVKTLQAIESAHVVLLLID 235
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A Q ++ QD +IA +I E+GR++++ VNKWD++ QR+++K +++ +L FL FA +FI
Sbjct: 236 ATQGVTDQDAHIAGYILENGRAVVLAVNKWDAVDDYQRELVKRSVETRLPFLKFANMHFI 295
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA K + SI Y ++ +ST +TR L+ A++ P R + RPKLRYAHQG
Sbjct: 296 SAQKRQGLGPLWASIAQAYKAATCKMSTPVLTRLLLEAVQFQSPQRSGMFRPKLRYAHQG 355
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYLE 419
G NPP+IVIHGN L+++ + YKR+LE
Sbjct: 356 GMNPPVIVIHGNSLEHVTDAYKRFLE 381
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
L + GRPNVGKSTL N + + PG TRD + F +IDT G
Sbjct: 147 LAVAGRPNVGKSTLINVWLGEERLVAFDLPGTTRDAISVPFERNGQKFELIDTAGLR--- 203
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
++G + E + +T QAI + +++ ++D QG+ +QD I ++ ++G+ +VL +N
Sbjct: 204 RRGKVFEAIEKFSVVKTLQAIESAHVVLLLIDATQGVTDQDAHIAGYILENGRAVVLAVN 263
Query: 120 KSENINS--------SISLDFYELGIGNPHIISALYGNGIKNFLENI 158
K + ++ S+ L N H ISA G+ +I
Sbjct: 264 KWDAVDDYQRELVKRSVETRLPFLKFANMHFISAQKRQGLGPLWASI 310
>gi|291085040|ref|ZP_06570912.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220]
gi|291071734|gb|EFE09843.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220]
Length = 504
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/443 (46%), Positives = 290/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 15 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 74
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 75 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRARQKPTFLVANK 133
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ + +DFY LG+G H I+A +G G+ + LE++L LP+ +E +
Sbjct: 134 TDGLDPDQAVIDFYSLGLGEIHPIAASHGRGVLSLLEHVL---LPWMDDVAPQEEVD-ED 189
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE+RV+ YD PG
Sbjct: 190 AEYWAKLAAEENGEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPG 249
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 250 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITEAVEKFSVIKTLQAIEDANVVMLVIDAR 309
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 310 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLTQEVKEQVKETLDFRLGFIDFARVHFISA 369
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS +ST+ +TR + A+++H P + R KL+YAH GG
Sbjct: 370 LHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 429
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 430 NPPIVVIHGNQVKDLPDSYKRYL 452
>gi|88799909|ref|ZP_01115481.1| predicted GTPase [Reinekea blandensis MED297]
gi|88777340|gb|EAR08543.1| predicted GTPase [Reinekea sp. MED297]
Length = 458
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/420 (45%), Positives = 283/420 (67%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNR T +RDALVA++ GLTRDR YG+G +G++ FI+IDTGG
Sbjct: 1 MTPVIALVGRPNVGKSTLFNRFTRTRDALVADWSGLTRDRKYGDGKLGERPFIVIDTGGV 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
++G+ M +Q+ AI E+D ++F+VDG+ G+ D + LRK+ + + LV+NK
Sbjct: 61 S-GFEEGLDEAMARQSFAAIDEADAVLFLVDGQSGITSADSFLAEHLRKTQKSVTLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +++ DFYELG+G P I+A G+++ LE++L ++F + E +
Sbjct: 120 TDGRDPDVAVADFYELGLGEPVAIAASQNRGVRSLLEDVL------EQFPEPIEQIDPME 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++AI+G+PNVGKSTL+N +LGE+RV+ YD PGTT DSI +E + K Y LIDTAG
Sbjct: 174 DDSIRLAIIGRPNVGKSTLVNRMLGEDRVVVYDHPGTTMDSIYIPYERHGKAYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E +EKFS++KTL++I +ANVV+L++DAQ + QD+++ F ESGR+L++
Sbjct: 234 VRRRKNITEAVEKFSIVKTLQAIQDANVVVLVIDAQDGLVDQDMHMLGFALESGRALVIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++ IK I +++ FL +A +FISA+ N+ ES+ YD +
Sbjct: 294 INKWDGLSEEKKDSIKTAIDRRMPFLDWADMHFISALHGTNVGHLYESVEEAYDGARSKW 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+ +T + ++ H P R KLRYAHQGG NPPI+VIHGN+L + YKRYLE
Sbjct: 354 STNHLTNLMQGVVEMHQPPMVGGRRIKLRYAHQGGSNPPIVVIHGNQLNKLPGSYKRYLE 413
>gi|157144555|ref|YP_001451874.1| GTP-binding protein EngA [Citrobacter koseri ATCC BAA-895]
gi|166224326|sp|A8AD75.1|DER_CITK8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157081760|gb|ABV11438.1| hypothetical protein CKO_00275 [Citrobacter koseri ATCC BAA-895]
Length = 490
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/443 (45%), Positives = 290/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ + +DFY LG+G H I+A +G G+ + LE++L LP+ +E +
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIHPIAASHGRGVLSLLEHVL---LPWMDDVAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE+RV+ YD PG
Sbjct: 176 AEYWAKLAAEENGEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDEREYVLIDTAGVRKRGKVTDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLTQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS +ST+ +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMAMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|87118473|ref|ZP_01074372.1| GTPase EngA [Marinomonas sp. MED121]
gi|86166107|gb|EAQ67373.1| GTPase EngA [Marinomonas sp. MED121]
Length = 454
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/421 (46%), Positives = 293/421 (69%), Gaps = 7/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN+LT SRDALVA+YPGLTRDR YG+G IG+ FI+IDTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTRSRDALVADYPGLTRDRKYGDGRIGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + GI +M +Q+ AI E+D ++F+VDGR GL D++I N LR+S +P +V+NK
Sbjct: 61 SGD-EMGIDEKMARQSLLAIEEADTVLFLVDGRHGLNPADEMIANHLRRSNKPTFMVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-KEFTNIH 178
++ IN ++L DFY +G+G+ H I+A +G G+ ++ + LP+ + ++ K +I
Sbjct: 120 TDGINEDVALADFYSIGLGDLHPIAASHGKGVHKLIDICM---LPFAEQVQEAKGQIDIE 176
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
S + ++ ++G+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+ + N K+Y LIDTA
Sbjct: 177 S-KGTRIGVIGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYIRNEKEYTLIDTA 235
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR E +EKFS++KTLK+I +ANVVI+++D +++ QD+++ ++ ++GR L++
Sbjct: 236 GVRRRKHIKEAVEKFSIVKTLKAIQDANVVIVVIDGHEDLVEQDLHMIGYVIDAGRGLVI 295
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + ++ IK ++++L F+ +A ++ISA+ + + ++I+ Y+S
Sbjct: 296 AVNKWDGLDQYSKERIKTEVERRLGFVPYAKVHYISALHGTAVGNLYDTIDETYESCYAK 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+R+TR + I H P + R KLRYAHQGG NPP IVIHGN++ + YK+YL
Sbjct: 356 WSTNRLTRIMEDIISEHQPPLVRGRRIKLRYAHQGGSNPPRIVIHGNQVDALPGSYKKYL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|387129675|ref|YP_006292565.1| GTP-binding protein EngA [Methylophaga sp. JAM7]
gi|386270964|gb|AFJ01878.1| GTP-binding protein EngA [Methylophaga sp. JAM7]
Length = 469
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/424 (48%), Positives = 284/424 (66%), Gaps = 10/424 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MK V+ L+GRPNVGKSTLFNRLT SRDALVA++ GLTRDR YG FI+IDTGG
Sbjct: 1 MKSVIALLGRPNVGKSTLFNRLTRSRDALVADHAGLTRDRIYGHVRDDNAQFILIDTGGL 60
Query: 61 EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E M E M KQ AI E+D+++F+VDGR GL+ D+ I LR G+P++LVIN
Sbjct: 61 TNETDS--MSELMRKQAALAIDEADLMVFLVDGRAGLLPADEEIARLLRNVGKPVLLVIN 118
Query: 120 KSENINSS-ISLDFYELGIGNPHIISALYGNGIK---NFLENILTIELPYKKFFKKKEFT 175
KSE ++ +FY +G+G P +ISA G GI N + NIL LP + +
Sbjct: 119 KSEGEQRELVAAEFYSMGLGEPVVISATQGRGIDRLLNHITNILPETLPELIVESEPDEE 178
Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
+I ++AIVG+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE + +Y I
Sbjct: 179 EDSTI---RLAIVGRPNVGKSTLVNRLLGEERVVAFDAPGTTRDSIYIPFEKDGTQYTFI 235
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG+RRR+K E +EKFSV+KTL+++ ANVV+L++DAQ+ I QD+++A I ESGR+
Sbjct: 236 DTAGVRRRSKVSEALEKFSVVKTLQAVEAANVVMLVVDAQEGIVDQDLHLAGLIIESGRA 295
Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+++ VNKWD + +R+ + +NI+++L FL+FA +FISA+ + + ++S+ Y ++
Sbjct: 296 VVIAVNKWDGLEKQEREWVASNIERRLPFLTFAKTHFISALHGSGVGLLLKSVKQAYQAA 355
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ + TSR+TR L AI +HPP R K R+AH GGKNPP ++IHGN+ + Y+
Sbjct: 356 LTKIPTSRLTRVLEDAIADHPPPLVNGRRIKYRFAHLGGKNPPRVIIHGNQTEATPQSYR 415
Query: 416 RYLE 419
RYLE
Sbjct: 416 RYLE 419
>gi|120554059|ref|YP_958410.1| GTP-binding protein EngA [Marinobacter aquaeolei VT8]
gi|387814562|ref|YP_005430048.1| ribosome synthesis and maintenance GTPase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|166225823|sp|A1TZQ4.1|DER_MARAV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|120323908|gb|ABM18223.1| small GTP-binding protein [Marinobacter aquaeolei VT8]
gi|381339578|emb|CCG95625.1| GTPase involved in ribosome synthesis and maintenance [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 473
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/420 (45%), Positives = 287/420 (68%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN++T SRDALVA++PGLTRDR YGEG + FI+IDTGG
Sbjct: 1 MTPVIALVGRPNVGKSTLFNQMTRSRDALVADFPGLTRDRKYGEGNYEGQKFIVIDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + GI EM +Q+ QA+ E+DI++F+VDGR GL D++I ++LRKSG+ LV+NK
Sbjct: 61 TGD-EAGIDAEMARQSMQAVEEADIVLFLVDGRAGLTAGDEMIADYLRKSGKQAHLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + ++ DFY LG + +I+A + GI + LE +L P + + ++ + +
Sbjct: 120 TDGQDPDVAAADFYSLGFESTFLIAAAHNRGILSLLEALL----PEPENPEDQDRADRYP 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++ +VG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+ +E +Y LIDTAG
Sbjct: 176 --GIRIGVVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYERQGHEYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E +EKFS+IKTL++I +A+VVIL++DA++ + QD+++ F+ ++GRSL++
Sbjct: 234 VRRRKNVREAVEKFSIIKTLQAIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRSLVIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + R +K + ++L+FL +A +ISA+ + + ES+ Y+S++
Sbjct: 294 INKWDGMDPEDRDRVKEQVARRLDFLDYADKYYISALHGTGVGTMYESVQACYESAMSKW 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+R+T L A+ H P R KLRYAHQGG NPP++V+HGN++ + YKRYLE
Sbjct: 354 PTNRLTAILQDAVAQHQPPMVHGRRIKLRYAHQGGSNPPVVVVHGNQVDSLPGAYKRYLE 413
>gi|323499818|ref|ZP_08104777.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326]
gi|323315059|gb|EGA68111.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326]
Length = 494
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/444 (44%), Positives = 294/444 (66%), Gaps = 28/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIAQHLRKLEKPSMLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGI-------------------KNFLENILT 160
+ I++ + S +F++LG+ N + I+A +G G+ K LE++
Sbjct: 120 VDGIDADAASAEFWQLGVENMYQIAAAHGRGVTALIDLALNPFAEKLLEESKGELEDLTG 179
Query: 161 IE------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
E L Y + ++EF + + IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 FEDEEQDKLDYTEEEAEQEFNRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 238
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 239 GTTRDSIYIPMERDGREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVMLVIDA 298
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +FIS
Sbjct: 299 RENISDQDLSLLGFALNAGRSIVIAVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHFIS 358
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH GG
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGG 418
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++ + + YKRYL
Sbjct: 419 YNPPIVVIHGNQVNELPDSYKRYL 442
>gi|432388021|ref|ZP_19630908.1| GTPase Der [Escherichia coli KTE16]
gi|432514817|ref|ZP_19752039.1| GTPase Der [Escherichia coli KTE224]
gi|432699945|ref|ZP_19935098.1| GTPase Der [Escherichia coli KTE169]
gi|432746510|ref|ZP_19981175.1| GTPase Der [Escherichia coli KTE43]
gi|433145114|ref|ZP_20330255.1| GTPase Der [Escherichia coli KTE168]
gi|430905524|gb|ELC27133.1| GTPase Der [Escherichia coli KTE16]
gi|431041203|gb|ELD51734.1| GTPase Der [Escherichia coli KTE224]
gi|431242921|gb|ELF37311.1| GTPase Der [Escherichia coli KTE169]
gi|431291048|gb|ELF81571.1| GTPase Der [Escherichia coli KTE43]
gi|431660743|gb|ELJ27606.1| GTPase Der [Escherichia coli KTE168]
Length = 490
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/443 (45%), Positives = 290/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ MT+Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMTEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|205353618|ref|YP_002227419.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|375124468|ref|ZP_09769632.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|445136906|ref|ZP_21383589.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|238690507|sp|B5RCY8.1|DER_SALG2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|205273399|emb|CAR38374.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326628718|gb|EGE35061.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|444844672|gb|ELX69902.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
Length = 490
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/439 (45%), Positives = 291/439 (66%), Gaps = 22/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIEL----PYKKFFKKKEFT 175
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L + P ++ + E+
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQEEVDEDAEYW 179
Query: 176 NIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
+E IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 180 AQFEVEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 239
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 240 SIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGIS 299
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA+ +
Sbjct: 300 DQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGS 359
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
++ + ES+ YDSS +ST+ +TR + A+++H P + R KL+YAH GG NPPI
Sbjct: 360 DVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPI 419
Query: 400 IVIHGNRLKYIGNDYKRYL 418
+VIHGN++K + + YKRYL
Sbjct: 420 VVIHGNQVKDLPDSYKRYL 438
>gi|420321401|ref|ZP_14823229.1| GTPase Der [Shigella flexneri 2850-71]
gi|391247472|gb|EIQ06721.1| GTPase Der [Shigella flexneri 2850-71]
Length = 490
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/443 (45%), Positives = 290/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K +V+EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|56480123|ref|NP_708350.2| GTP-binding protein Der [Shigella flexneri 2a str. 301]
gi|161984887|ref|YP_408907.2| GTP-binding protein EngA [Shigella boydii Sb227]
gi|56383674|gb|AAN44057.2| putative GTP-binding factor [Shigella flexneri 2a str. 301]
Length = 490
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 290/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV+NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|30063903|ref|NP_838074.1| GTP-binding protein EngA [Shigella flexneri 2a str. 2457T]
gi|110806442|ref|YP_689962.1| GTP-binding protein EngA [Shigella flexneri 5 str. 8401]
gi|384544127|ref|YP_005728190.1| GTP-binding protein engA [Shigella flexneri 2002017]
gi|415853751|ref|ZP_11529681.1| small GTP-binding domain protein [Shigella flexneri 2a str. 2457T]
gi|417703044|ref|ZP_12352155.1| small GTP-binding domain protein [Shigella flexneri K-218]
gi|417724132|ref|ZP_12372936.1| small GTP-binding domain protein [Shigella flexneri K-304]
gi|417729436|ref|ZP_12378134.1| small GTP-binding domain protein [Shigella flexneri K-671]
gi|417734231|ref|ZP_12382882.1| small GTP-binding domain protein [Shigella flexneri 2747-71]
gi|417739382|ref|ZP_12387961.1| small GTP-binding domain protein [Shigella flexneri 4343-70]
gi|417744403|ref|ZP_12392929.1| small GTP-binding domain protein [Shigella flexneri 2930-71]
gi|418257516|ref|ZP_12881184.1| small GTP-binding domain protein [Shigella flexneri 6603-63]
gi|420342837|ref|ZP_14844310.1| GTPase Der [Shigella flexneri K-404]
gi|424838837|ref|ZP_18263474.1| GTP-binding protein EngA [Shigella flexneri 5a str. M90T]
gi|123146827|sp|Q0T208.1|DER_SHIF8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|30042158|gb|AAP17884.1| putative GTP-binding factor [Shigella flexneri 2a str. 2457T]
gi|110615990|gb|ABF04657.1| putative GTP-binding factor [Shigella flexneri 5 str. 8401]
gi|281601913|gb|ADA74897.1| GTP-binding protein engA [Shigella flexneri 2002017]
gi|313650997|gb|EFS15397.1| small GTP-binding domain protein [Shigella flexneri 2a str. 2457T]
gi|332754198|gb|EGJ84566.1| small GTP-binding domain protein [Shigella flexneri 4343-70]
gi|332755561|gb|EGJ85925.1| small GTP-binding domain protein [Shigella flexneri K-671]
gi|332756305|gb|EGJ86656.1| small GTP-binding domain protein [Shigella flexneri 2747-71]
gi|332766344|gb|EGJ96554.1| small GTP-binding domain protein [Shigella flexneri 2930-71]
gi|333001904|gb|EGK21470.1| small GTP-binding domain protein [Shigella flexneri K-218]
gi|333016427|gb|EGK35758.1| small GTP-binding domain protein [Shigella flexneri K-304]
gi|383467889|gb|EID62910.1| GTP-binding protein EngA [Shigella flexneri 5a str. M90T]
gi|391265910|gb|EIQ24877.1| GTPase Der [Shigella flexneri K-404]
gi|397897138|gb|EJL13549.1| small GTP-binding domain protein [Shigella flexneri 6603-63]
Length = 490
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 290/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV+NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|254506757|ref|ZP_05118897.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16]
gi|219550338|gb|EED27323.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16]
Length = 494
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 296/443 (66%), Gaps = 27/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIAKHLRKLEKPSMLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGI-------------------KNFLENILT 160
+ I++ + S +F++LG+ N + I+A +G G+ K LE++
Sbjct: 120 VDGIDADAASAEFWQLGVENMYQIAAAHGRGVTALIELALNPFAEKLLDESKGELEDLTE 179
Query: 161 IE-----LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
E L Y + ++EFT + + IK+AI+G+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 FEDEEEKLDYSEEEAEEEFTRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG 238
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++DA+
Sbjct: 239 TTRDSIYIPMERDGREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVLLVIDAR 298
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +FISA
Sbjct: 299 ENISDQDLSLLGFALNAGRSIVIAVNKWDGLDMDVKEHVKKELDRRLGFVDFARIHFISA 358
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + ES+ Y S+ + TS +TR + A ++H P + R KL+YAH GG
Sbjct: 359 LHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAHAGGY 418
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++ + + YKRYL
Sbjct: 419 NPPIVVIHGNQVNDLPDSYKRYL 441
>gi|440286602|ref|YP_007339367.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium
strain FGI 57]
gi|440046124|gb|AGB77182.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium
strain FGI 57]
Length = 492
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/444 (45%), Positives = 295/444 (66%), Gaps = 30/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M +Q+ AI E+D+++F+VD R GL+ DK I LR +P LV NK
Sbjct: 61 D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADKAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------- 164
++ +++ ++ DF+ LG+G+ + I+A +G G+ + LE++L LP
Sbjct: 120 TDGVDADQAIADFWSLGLGDIYPIAASHGRGVTSLLEHVL---LPFVDDVNPPEEVDEDA 176
Query: 165 --YKKFFKKKEFTNIHSIE--------YIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
+ KF ++ + E IK+AIVG+PNVGKSTL N +LGE+RV+ YD P
Sbjct: 177 EYWAKFEAEQNGEPLEEPEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMP 236
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI + + ++Y+LIDTAG+R+R K +V+EKFSVIKTL++I +ANVV+L++DA
Sbjct: 237 GTTRDSIYIPMQRDEREYVLIDTAGVRKRGKITDVVEKFSVIKTLQAIEDANVVLLVIDA 296
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++ IS QD+++ FI SGRSL++ VNKWD + + R+ +K + +L F+ FA +FIS
Sbjct: 297 REGISDQDLSLLGFILNSGRSLVIVVNKWDGLSNEVREQVKETLDYRLGFIDFARVHFIS 356
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + + + ES+ YDSS + T+ +TR + A+++H P + R KL+YAH GG
Sbjct: 357 ALHGSGVGNLFESVREAYDSSTRRVGTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGG 416
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 417 YNPPIVVIHGNQVKDLPDSYKRYL 440
>gi|419701355|ref|ZP_14228956.1| GTP-binding protein Der [Escherichia coli SCI-07]
gi|380347556|gb|EIA35843.1| GTP-binding protein Der [Escherichia coli SCI-07]
Length = 490
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYALGLGETYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|254449216|ref|ZP_05062665.1| GTP-binding protein EngA [gamma proteobacterium HTCC5015]
gi|198261193|gb|EDY85489.1| GTP-binding protein EngA [gamma proteobacterium HTCC5015]
Length = 472
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/419 (46%), Positives = 283/419 (67%), Gaps = 6/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ +VGRPNVGKSTLFN LT +RDALVA+ PGLTRDR YG G +G ++++++DTGG
Sbjct: 1 MKPVIAIVGRPNVGKSTLFNCLTRTRDALVADMPGLTRDRKYGNGKLGDRAYVVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + + + M Q +QA+ E+DI++F+VD R+G+ D+ I +RK G+P+ LV NK
Sbjct: 61 STD-QDEMDNLMASQAQQAMDEADILLFMVDSREGINPIDENIAREIRKKGKPVFLVANK 119
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + I DFY+LG+G P I+A + G+ + +E + LP F + E +
Sbjct: 120 MDGCDPDVIRADFYQLGLGEPLTIAASHNRGVHSLIETLFET-LP--DHFDE-EIPDKEH 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +++A+VG+PNVGKSTLIN +LGE RV+ YD PGTTRDSI FE +Y LIDTAG
Sbjct: 176 DDSVRIAVVGRPNVGKSTLINRILGETRVLAYDAPGTTRDSIFVPFESELGRYTLIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K E +EKFSV+K L++I EA+VV+ ++DA++ ++ QD+ + + G +L+
Sbjct: 236 VRKRGKIHETVEKFSVVKALQAIAEAHVVLQVIDARRGVAEQDLTLLREVLHQGSALVFV 295
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +R IK ++ ++LNF+SF F+FISA+ + +E++N YDS++I L
Sbjct: 296 INKWDGLSPEERDFIKEDLSRRLNFISFPEFHFISALHGTGVGHILEAVNRAYDSAMIKL 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T ++T L A H P R KLRYAHQGGKNPP IV+HGNR++++ N YKRYL
Sbjct: 356 GTKQLTDVLEEATVAHQPPLVGRYRTKLRYAHQGGKNPPRIVVHGNRVEHLSNSYKRYL 414
>gi|419920349|ref|ZP_14438467.1| GTP-binding protein EngA [Escherichia coli KD2]
gi|388384881|gb|EIL46587.1| GTP-binding protein EngA [Escherichia coli KD2]
Length = 490
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 290/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQDVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|198283717|ref|YP_002220038.1| GTP-binding protein EngA [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667499|ref|YP_002426346.1| GTP-binding protein EngA [Acidithiobacillus ferrooxidans ATCC
23270]
gi|226741127|sp|B7JC34.1|DER_ACIF2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238690897|sp|B5EJF7.1|DER_ACIF5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|198248238|gb|ACH83831.1| small GTP-binding protein [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519712|gb|ACK80298.1| ribosome-associated GTPase EngA [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 449
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/420 (45%), Positives = 280/420 (66%), Gaps = 7/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M V+ LVGRPNVGKST FNRLT +R+ALVA+ PGLTRDRHYG + ++++DTGGF
Sbjct: 1 MTAVIALVGRPNVGKSTFFNRLTRTREALVADLPGLTRDRHYGTAQFEGRQYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE ++G++ M QT+ AI E+D I F+VD ++GL QD I LR+ G+PI LV+NK
Sbjct: 61 EPEEREGLVAAMAAQTRLAITEADAICFLVDAKEGLSTQDAEIAQELRRGGKPIYLVVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + L +FY LG+G P+ ISA +G+G++ LE I + +LP ++ T +
Sbjct: 121 MDAKGAVSELPEFYRLGLGTPYTISAAHGHGVEPLLEAIFS-DLP-----TSEDDTADAA 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++A++G+PNVGKSTL+N++LGE RV+ +D PGTTRDSI+ +E K Y++IDTAG
Sbjct: 175 RKGPRIAMLGRPNVGKSTLVNTMLGEKRVLVFDEPGTTRDSIRIPYERQGKPYVMIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + E +EK SV+KTL ++ EA+VV+L+LDA+ I+ QD ++ E GR ++V
Sbjct: 235 MRRRARVGEGLEKLSVLKTLSALREADVVLLVLDARLGIAEQDAHLVGVAVELGRPIVVV 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +RK +K ++++L+F+ +A ISA+ + +SI+ ++ S H
Sbjct: 295 VNKWDGMTPEERKAVKQELERRLDFIRYAPVYTISALHGTGVGDLYKSIDQLWIDSRRHF 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+ + RAL I+ H P R KLRY HQGG+NP +V HGN+L + YKRYLE
Sbjct: 355 STAELNRALADVIETHQPPMVGGRRIKLRYCHQGGENPITLVFHGNQLTRLPGTYKRYLE 414
>gi|170767411|ref|ZP_02901864.1| GTP-binding protein EngA [Escherichia albertii TW07627]
gi|170123745|gb|EDS92676.1| GTP-binding protein EngA [Escherichia albertii TW07627]
Length = 499
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 290/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE +L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLERVL---LPWMEELAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE+RV+ YD PG
Sbjct: 185 AEYWAQFEAQENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|419921567|ref|ZP_14439619.1| GTP-binding protein EngA [Escherichia coli 541-15]
gi|432534832|ref|ZP_19771804.1| GTPase Der [Escherichia coli KTE234]
gi|388397518|gb|EIL58496.1| GTP-binding protein EngA [Escherichia coli 541-15]
gi|431059587|gb|ELD68940.1| GTPase Der [Escherichia coli KTE234]
Length = 490
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAACHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|301024743|ref|ZP_07188383.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1]
gi|300396412|gb|EFJ79950.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1]
Length = 499
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 290/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQDVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|215487861|ref|YP_002330292.1| GTP-binding protein EngA [Escherichia coli O127:H6 str. E2348/69]
gi|254783152|sp|B7UGV7.1|DER_ECO27 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|215265933|emb|CAS10342.1| predicted GTP-binding protein [Escherichia coli O127:H6 str.
E2348/69]
Length = 490
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLSDSYKRYL 438
>gi|345872012|ref|ZP_08823952.1| GTP-binding protein engA [Thiorhodococcus drewsii AZ1]
gi|343919546|gb|EGV30292.1| GTP-binding protein engA [Thiorhodococcus drewsii AZ1]
Length = 463
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/419 (46%), Positives = 287/419 (68%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ L+GRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG G +G +II+DTGG
Sbjct: 1 MLPVITLIGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRQYGIGRVGPGPYIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+G+ M +Q ++AI E+D ++F+VD + G +D I LR+ G+PI LV+NK
Sbjct: 61 G-TAAEGVEALMERQVQRAIEEADHLLFLVDAKDGATPEDIEIVQRLRRLGKPIALVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
S+ + ++++ DF+ LG+G+P ISA G G+ +E++ +LP E +
Sbjct: 120 SDTTDPNLAVADFHGLGLGDPWAISASQGLGVNKLIEHVFG-QLP----IDTDETAD--D 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I+VA+VG+PN GKST+IN LLGE R++T+D+PGTTRDSI FE ++Y LIDTAG
Sbjct: 173 DQGIRVALVGRPNAGKSTMINRLLGEERLVTFDSPGTTRDSIFIPFERLGRRYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + + IEKFSVIKTL++I E+NVVIL++DA + + QD +A I ESGR+L+V
Sbjct: 233 LRRRARVQDAIEKFSVIKTLQAIEESNVVILVIDAHEGVGEQDATLAGHIIESGRALVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++R+ ++ +KL FL FA + +SA+ + + ++ ++ Y ++ +L
Sbjct: 293 INKWDGLQPDEREHVREQFSRKLAFLDFAKLHLVSALHGSGVGLLLDEVDKAYANATRNL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+T +TR L SA++ H P + R KLRYAHQGG+NPPIIVIHGN+ + + Y+RYL
Sbjct: 353 ATPELTRLLESAVQEHQPPLVRGRRIKLRYAHQGGRNPPIIVIHGNQTEDVPETYRRYL 411
>gi|207857927|ref|YP_002244578.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|378954146|ref|YP_005211633.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|421357052|ref|ZP_15807365.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421361378|ref|ZP_15811642.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421367131|ref|ZP_15817332.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421372689|ref|ZP_15822837.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421375733|ref|ZP_15825845.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421381049|ref|ZP_15831105.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421383731|ref|ZP_15833762.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421388658|ref|ZP_15838646.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421396293|ref|ZP_15846224.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421401586|ref|ZP_15851461.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421402012|ref|ZP_15851876.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421408909|ref|ZP_15858706.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421413715|ref|ZP_15863467.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421415477|ref|ZP_15865203.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421423614|ref|ZP_15873269.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421424838|ref|ZP_15874476.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421429356|ref|ZP_15878953.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421437188|ref|ZP_15886710.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421437856|ref|ZP_15887366.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446296|ref|ZP_15895712.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421449722|ref|ZP_15899104.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|436592281|ref|ZP_20512135.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436720342|ref|ZP_20518985.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436802860|ref|ZP_20525559.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436811038|ref|ZP_20530034.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436817151|ref|ZP_20534233.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436845485|ref|ZP_20538812.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436853350|ref|ZP_20543310.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436859561|ref|ZP_20547474.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436863732|ref|ZP_20550027.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436868432|ref|ZP_20553192.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436882800|ref|ZP_20561425.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436887158|ref|ZP_20563558.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436898925|ref|ZP_20570560.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436901136|ref|ZP_20572060.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436909409|ref|ZP_20576133.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436921344|ref|ZP_20583747.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436930037|ref|ZP_20588548.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436938069|ref|ZP_20592981.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436945334|ref|ZP_20597488.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436949498|ref|ZP_20599479.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436960756|ref|ZP_20604393.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436974659|ref|ZP_20611158.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436983922|ref|ZP_20614242.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436991126|ref|ZP_20617305.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437007427|ref|ZP_20623280.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437016652|ref|ZP_20626068.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437033320|ref|ZP_20632514.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437037924|ref|ZP_20634334.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437049630|ref|ZP_20640222.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437054928|ref|ZP_20643228.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437066399|ref|ZP_20649477.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437072818|ref|ZP_20652660.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437080640|ref|ZP_20657190.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437088897|ref|ZP_20661802.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437111626|ref|ZP_20668213.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437118558|ref|ZP_20670392.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437133441|ref|ZP_20678414.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437139483|ref|ZP_20681816.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437143575|ref|ZP_20684399.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437149977|ref|ZP_20688487.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437160247|ref|ZP_20694523.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437172210|ref|ZP_20701008.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437180349|ref|ZP_20706072.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437185731|ref|ZP_20709152.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437206835|ref|ZP_20712561.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437262195|ref|ZP_20718915.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437270383|ref|ZP_20723179.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437275164|ref|ZP_20725710.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437284182|ref|ZP_20729435.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437315440|ref|ZP_20737129.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437330761|ref|ZP_20741788.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437336088|ref|ZP_20742910.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437377378|ref|ZP_20750033.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437420452|ref|ZP_20754626.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437439224|ref|ZP_20757164.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437461317|ref|ZP_20762266.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437472198|ref|ZP_20765433.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437489924|ref|ZP_20770706.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437510812|ref|ZP_20776890.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437524983|ref|ZP_20779550.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437549555|ref|ZP_20783354.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437576694|ref|ZP_20790765.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437593485|ref|ZP_20795418.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437606108|ref|ZP_20799642.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437613330|ref|ZP_20801514.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437627607|ref|ZP_20805890.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437662554|ref|ZP_20813519.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437676517|ref|ZP_20816978.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437695098|ref|ZP_20822068.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437713639|ref|ZP_20827519.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437721448|ref|ZP_20829066.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437753120|ref|ZP_20834008.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437814545|ref|ZP_20842367.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437868880|ref|ZP_20848283.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|437991323|ref|ZP_20853795.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|438082436|ref|ZP_20857781.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438100707|ref|ZP_20863974.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438109160|ref|ZP_20867223.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|438131971|ref|ZP_20873738.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|445173601|ref|ZP_21396742.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445191687|ref|ZP_21399861.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445232243|ref|ZP_21406014.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445275219|ref|ZP_21410555.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445334897|ref|ZP_21415277.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445344441|ref|ZP_21417617.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445361956|ref|ZP_21424019.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|238690463|sp|B5R578.1|DER_SALEP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|206709730|emb|CAR34082.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|357204757|gb|AET52803.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|395988763|gb|EJH97909.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395992354|gb|EJI01472.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395993381|gb|EJI02476.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395999605|gb|EJI08623.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396002143|gb|EJI11148.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396004648|gb|EJI13630.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|396009902|gb|EJI18817.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396019641|gb|EJI28493.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396020968|gb|EJI29801.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396021114|gb|EJI29945.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396026468|gb|EJI35235.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396033288|gb|EJI41998.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396036335|gb|EJI44996.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396038856|gb|EJI47490.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396047714|gb|EJI56285.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396050613|gb|EJI59136.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396058920|gb|EJI67379.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396059013|gb|EJI67471.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396063225|gb|EJI71626.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396069230|gb|EJI77570.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396075029|gb|EJI83306.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|434941368|gb|ELL47819.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434956964|gb|ELL50646.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434964569|gb|ELL57567.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434971600|gb|ELL64103.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434978454|gb|ELL70487.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434978685|gb|ELL70682.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434984079|gb|ELL75840.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434984211|gb|ELL75955.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|434987721|gb|ELL79353.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434997215|gb|ELL88480.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435003002|gb|ELL94041.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435004114|gb|ELL95107.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435011061|gb|ELM01798.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435013341|gb|ELM03995.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435021717|gb|ELM12085.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435025438|gb|ELM15586.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435028833|gb|ELM18893.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435032861|gb|ELM22784.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435034520|gb|ELM24389.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435036112|gb|ELM25934.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435052567|gb|ELM42058.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435052662|gb|ELM42150.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435053252|gb|ELM42705.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435064565|gb|ELM53692.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435068649|gb|ELM57660.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435068836|gb|ELM57846.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435077334|gb|ELM66089.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435082634|gb|ELM71246.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435087924|gb|ELM76397.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435096074|gb|ELM84348.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435098295|gb|ELM86538.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435099276|gb|ELM87487.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435109502|gb|ELM97449.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435112294|gb|ELN00163.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435116320|gb|ELN04066.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435118035|gb|ELN05716.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435120671|gb|ELN08236.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435131371|gb|ELN18584.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435132094|gb|ELN19295.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435139660|gb|ELN26643.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435145210|gb|ELN32034.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435147161|gb|ELN33940.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435147664|gb|ELN34421.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435149141|gb|ELN35854.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435159282|gb|ELN45634.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435162120|gb|ELN48316.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435171114|gb|ELN56757.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435175087|gb|ELN60515.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435180905|gb|ELN66005.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435186169|gb|ELN71018.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435189371|gb|ELN74005.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435197804|gb|ELN82060.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435201130|gb|ELN85062.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435204105|gb|ELN87817.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435206324|gb|ELN89863.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435212618|gb|ELN95587.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435220375|gb|ELO02672.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435226430|gb|ELO08008.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435231134|gb|ELO12392.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435231954|gb|ELO13099.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435243387|gb|ELO23653.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435246738|gb|ELO26728.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435248684|gb|ELO28540.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435251799|gb|ELO31397.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435256377|gb|ELO35686.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435264585|gb|ELO43497.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435267465|gb|ELO46163.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435276254|gb|ELO54266.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435278051|gb|ELO55927.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435285831|gb|ELO63193.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435286583|gb|ELO63836.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435294467|gb|ELO71100.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435295610|gb|ELO72059.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435311372|gb|ELO85549.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435320625|gb|ELO93192.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435324978|gb|ELO96871.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435332737|gb|ELP03640.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|435335300|gb|ELP05566.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|435336745|gb|ELP06553.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|444859841|gb|ELX84777.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444862593|gb|ELX87441.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444867875|gb|ELX92548.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444874989|gb|ELX99221.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444880202|gb|ELY04282.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444884402|gb|ELY08235.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|444887705|gb|ELY11395.1| GTP-binding protein Der [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
Length = 490
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/439 (45%), Positives = 290/439 (66%), Gaps = 22/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIEL----PYKKFFKKKEFT 175
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L + P ++ + E+
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQEEVDEDAEYW 179
Query: 176 NIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
+E IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 180 AQFEVEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 239
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 240 SIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGIS 299
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA+ +
Sbjct: 300 DQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGS 359
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ + ES+ YDSS +ST+ +TR + A+++H P + R KL+YAH GG NPPI
Sbjct: 360 GVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPI 419
Query: 400 IVIHGNRLKYIGNDYKRYL 418
+VIHGN++K + + YKRYL
Sbjct: 420 VVIHGNQVKDLPDSYKRYL 438
>gi|432486293|ref|ZP_19728208.1| GTPase Der [Escherichia coli KTE212]
gi|433174413|ref|ZP_20358935.1| GTPase Der [Escherichia coli KTE232]
gi|431015502|gb|ELD29057.1| GTPase Der [Escherichia coli KTE212]
gi|431691625|gb|ELJ57083.1| GTPase Der [Escherichia coli KTE232]
Length = 490
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLTQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|300920666|ref|ZP_07137077.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1]
gi|300412347|gb|EFJ95657.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1]
Length = 499
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAACHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|81246371|gb|ABB67079.1| putative GTP-binding factor [Shigella boydii Sb227]
Length = 503
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 290/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 14 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV+NK
Sbjct: 74 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVVNK 132
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYL 451
>gi|62181086|ref|YP_217503.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224582944|ref|YP_002636742.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|375115427|ref|ZP_09760597.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|81309623|sp|Q57LJ0.1|DER_SALCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783165|sp|C0PYN4.1|DER_SALPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|62128719|gb|AAX66422.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224467471|gb|ACN45301.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322715573|gb|EFZ07144.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 490
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/439 (45%), Positives = 289/439 (65%), Gaps = 22/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIEL----PYKKFFKKKEFT 175
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L + P +K + E+
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQEKVDEDAEYW 179
Query: 176 NIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
E IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 180 AQFEAEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 239
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 240 SIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGIS 299
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA+ +
Sbjct: 300 DQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGS 359
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ + ES+ YDSS +ST+ +TR + A+++H P + R KL+YAH GG NPPI
Sbjct: 360 GVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPI 419
Query: 400 IVIHGNRLKYIGNDYKRYL 418
+VIHGN++K + + YKRYL
Sbjct: 420 VVIHGNQVKDLPDSYKRYL 438
>gi|420337230|ref|ZP_14838796.1| GTPase Der [Shigella flexneri K-315]
gi|391260108|gb|EIQ19173.1| GTPase Der [Shigella flexneri K-315]
Length = 490
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 290/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT++RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEKEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|417286436|ref|ZP_12073725.1| ribosome-associated GTPase EngA [Escherichia coli TW07793]
gi|386249895|gb|EII96064.1| ribosome-associated GTPase EngA [Escherichia coli TW07793]
Length = 490
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-QD 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|417342951|ref|ZP_12123630.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|357955994|gb|EHJ81605.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
Length = 504
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/439 (45%), Positives = 290/439 (66%), Gaps = 22/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI IDTGG
Sbjct: 15 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 74
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 75 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 133
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIEL----PYKKFFKKKEFT 175
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L + P ++ + E+
Sbjct: 134 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQEEVDEDAEYW 193
Query: 176 NIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
+E IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 194 AQFEVEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 253
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 254 SIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGIS 313
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA+ +
Sbjct: 314 DQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGS 373
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ + ES+ YDSS +ST+ +TR + A+++H P + R KL+YAH GG NPPI
Sbjct: 374 GVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPI 433
Query: 400 IVIHGNRLKYIGNDYKRYL 418
+VIHGN++K + + YKRYL
Sbjct: 434 VVIHGNQVKDLPDSYKRYL 452
>gi|432802706|ref|ZP_20036675.1| GTPase Der [Escherichia coli KTE84]
gi|431347848|gb|ELG34725.1| GTPase Der [Escherichia coli KTE84]
Length = 490
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEADDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|300904315|ref|ZP_07122172.1| ribosome-associated GTPase EngA, partial [Escherichia coli MS 84-1]
gi|300403747|gb|EFJ87285.1| ribosome-associated GTPase EngA [Escherichia coli MS 84-1]
Length = 492
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|170681267|ref|YP_001744699.1| GTP-binding protein EngA [Escherichia coli SMS-3-5]
gi|218706014|ref|YP_002413533.1| GTP-binding protein EngA [Escherichia coli UMN026]
gi|293405952|ref|ZP_06649944.1| GTP-binding protein engA [Escherichia coli FVEC1412]
gi|298381753|ref|ZP_06991352.1| GTP-binding protein engA [Escherichia coli FVEC1302]
gi|331664074|ref|ZP_08364984.1| ribosome-associated GTPase EngA [Escherichia coli TA143]
gi|387608161|ref|YP_006097017.1| GTP-binding protein [Escherichia coli 042]
gi|417587510|ref|ZP_12238279.1| small GTP-binding domain protein [Escherichia coli STEC_C165-02]
gi|419933195|ref|ZP_14450463.1| GTP-binding protein EngA [Escherichia coli 576-1]
gi|422787128|ref|ZP_16839867.1| ribosome GTPase EngA [Escherichia coli H489]
gi|422829998|ref|ZP_16878160.1| GTP-binding protein engA [Escherichia coli B093]
gi|422972908|ref|ZP_16975520.1| GTPase Der [Escherichia coli TA124]
gi|425306241|ref|ZP_18695943.1| ribosome-associated GTPase EngA [Escherichia coli N1]
gi|432354427|ref|ZP_19597698.1| GTPase Der [Escherichia coli KTE2]
gi|432402776|ref|ZP_19645528.1| GTPase Der [Escherichia coli KTE26]
gi|432427042|ref|ZP_19669541.1| GTPase Der [Escherichia coli KTE181]
gi|432461508|ref|ZP_19703655.1| GTPase Der [Escherichia coli KTE204]
gi|432476732|ref|ZP_19718729.1| GTPase Der [Escherichia coli KTE208]
gi|432490279|ref|ZP_19732148.1| GTPase Der [Escherichia coli KTE213]
gi|432518610|ref|ZP_19755796.1| GTPase Der [Escherichia coli KTE228]
gi|432538733|ref|ZP_19775633.1| GTPase Der [Escherichia coli KTE235]
gi|432603142|ref|ZP_19839386.1| GTPase Der [Escherichia coli KTE66]
gi|432632272|ref|ZP_19868197.1| GTPase Der [Escherichia coli KTE80]
gi|432641988|ref|ZP_19877820.1| GTPase Der [Escherichia coli KTE83]
gi|432666937|ref|ZP_19902516.1| GTPase Der [Escherichia coli KTE116]
gi|432681121|ref|ZP_19916494.1| GTPase Der [Escherichia coli KTE143]
gi|432719659|ref|ZP_19954627.1| GTPase Der [Escherichia coli KTE9]
gi|432771463|ref|ZP_20005788.1| GTPase Der [Escherichia coli KTE50]
gi|432775591|ref|ZP_20009860.1| GTPase Der [Escherichia coli KTE54]
gi|432793702|ref|ZP_20027786.1| GTPase Der [Escherichia coli KTE78]
gi|432799661|ref|ZP_20033682.1| GTPase Der [Escherichia coli KTE79]
gi|432840303|ref|ZP_20073768.1| GTPase Der [Escherichia coli KTE140]
gi|432852169|ref|ZP_20082211.1| GTPase Der [Escherichia coli KTE144]
gi|432863374|ref|ZP_20087421.1| GTPase Der [Escherichia coli KTE146]
gi|432887488|ref|ZP_20101541.1| GTPase Der [Escherichia coli KTE158]
gi|432913728|ref|ZP_20119361.1| GTPase Der [Escherichia coli KTE190]
gi|432962776|ref|ZP_20152308.1| GTPase Der [Escherichia coli KTE202]
gi|433019574|ref|ZP_20207774.1| GTPase Der [Escherichia coli KTE105]
gi|433054155|ref|ZP_20241329.1| GTPase Der [Escherichia coli KTE122]
gi|433063951|ref|ZP_20250870.1| GTPase Der [Escherichia coli KTE125]
gi|433068801|ref|ZP_20255587.1| GTPase Der [Escherichia coli KTE128]
gi|433159556|ref|ZP_20344391.1| GTPase Der [Escherichia coli KTE177]
gi|433179346|ref|ZP_20363741.1| GTPase Der [Escherichia coli KTE82]
gi|433204180|ref|ZP_20387947.1| GTPase Der [Escherichia coli KTE95]
gi|226741139|sp|B7N699.1|DER_ECOLU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226741140|sp|B1LNG6.1|DER_ECOSM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|170518985|gb|ACB17163.1| GTP-binding protein EngA [Escherichia coli SMS-3-5]
gi|218433111|emb|CAR14008.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
coli UMN026]
gi|284922461|emb|CBG35548.1| GTP-binding protein [Escherichia coli 042]
gi|291428160|gb|EFF01187.1| GTP-binding protein engA [Escherichia coli FVEC1412]
gi|298279195|gb|EFI20709.1| GTP-binding protein engA [Escherichia coli FVEC1302]
gi|323961327|gb|EGB56939.1| ribosome GTPase EngA [Escherichia coli H489]
gi|331059873|gb|EGI31850.1| ribosome-associated GTPase EngA [Escherichia coli TA143]
gi|345335540|gb|EGW67978.1| small GTP-binding domain protein [Escherichia coli STEC_C165-02]
gi|371597541|gb|EHN86362.1| GTPase Der [Escherichia coli TA124]
gi|371607185|gb|EHN95763.1| GTP-binding protein engA [Escherichia coli B093]
gi|388414225|gb|EIL74191.1| GTP-binding protein EngA [Escherichia coli 576-1]
gi|408227873|gb|EKI51442.1| ribosome-associated GTPase EngA [Escherichia coli N1]
gi|430874834|gb|ELB98386.1| GTPase Der [Escherichia coli KTE2]
gi|430925247|gb|ELC45920.1| GTPase Der [Escherichia coli KTE26]
gi|430954741|gb|ELC73596.1| GTPase Der [Escherichia coli KTE181]
gi|430988329|gb|ELD04823.1| GTPase Der [Escherichia coli KTE204]
gi|431004550|gb|ELD19764.1| GTPase Der [Escherichia coli KTE208]
gi|431019731|gb|ELD33125.1| GTPase Der [Escherichia coli KTE213]
gi|431050404|gb|ELD60154.1| GTPase Der [Escherichia coli KTE228]
gi|431068613|gb|ELD77087.1| GTPase Der [Escherichia coli KTE235]
gi|431141716|gb|ELE43481.1| GTPase Der [Escherichia coli KTE66]
gi|431169850|gb|ELE70065.1| GTPase Der [Escherichia coli KTE80]
gi|431181251|gb|ELE81122.1| GTPase Der [Escherichia coli KTE83]
gi|431199763|gb|ELE98490.1| GTPase Der [Escherichia coli KTE116]
gi|431219851|gb|ELF17240.1| GTPase Der [Escherichia coli KTE143]
gi|431261852|gb|ELF53875.1| GTPase Der [Escherichia coli KTE9]
gi|431313929|gb|ELG01884.1| GTPase Der [Escherichia coli KTE50]
gi|431317595|gb|ELG05373.1| GTPase Der [Escherichia coli KTE54]
gi|431339365|gb|ELG26427.1| GTPase Der [Escherichia coli KTE78]
gi|431342769|gb|ELG29740.1| GTPase Der [Escherichia coli KTE79]
gi|431388337|gb|ELG72073.1| GTPase Der [Escherichia coli KTE140]
gi|431399425|gb|ELG82832.1| GTPase Der [Escherichia coli KTE144]
gi|431403972|gb|ELG87232.1| GTPase Der [Escherichia coli KTE146]
gi|431415837|gb|ELG98332.1| GTPase Der [Escherichia coli KTE158]
gi|431438993|gb|ELH20362.1| GTPase Der [Escherichia coli KTE190]
gi|431472650|gb|ELH52537.1| GTPase Der [Escherichia coli KTE202]
gi|431529882|gb|ELI06573.1| GTPase Der [Escherichia coli KTE105]
gi|431569584|gb|ELI42526.1| GTPase Der [Escherichia coli KTE122]
gi|431580737|gb|ELI53294.1| GTPase Der [Escherichia coli KTE125]
gi|431582684|gb|ELI54696.1| GTPase Der [Escherichia coli KTE128]
gi|431677048|gb|ELJ43130.1| GTPase Der [Escherichia coli KTE177]
gi|431700229|gb|ELJ65211.1| GTPase Der [Escherichia coli KTE82]
gi|431720127|gb|ELJ84161.1| GTPase Der [Escherichia coli KTE95]
Length = 490
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|162138394|ref|YP_541823.2| GTP-binding protein EngA [Escherichia coli UTI89]
gi|218559437|ref|YP_002392350.1| GTP-binding protein EngA [Escherichia coli S88]
gi|218690631|ref|YP_002398843.1| GTP-binding protein EngA [Escherichia coli ED1a]
gi|222157217|ref|YP_002557356.1| GTP-binding protein engA [Escherichia coli LF82]
gi|306814419|ref|ZP_07448581.1| GTP-binding protein EngA [Escherichia coli NC101]
gi|386600489|ref|YP_006101995.1| ribosome-associated GTPase EngA [Escherichia coli IHE3034]
gi|386603449|ref|YP_006109749.1| GTP-binding protein EngA [Escherichia coli UM146]
gi|387617827|ref|YP_006120849.1| GTP-binding protein EngA [Escherichia coli O83:H1 str. NRG 857C]
gi|417085911|ref|ZP_11953221.1| GTP-binding protein EngA [Escherichia coli cloneA_i1]
gi|419947488|ref|ZP_14463834.1| GTP-binding protein EngA [Escherichia coli HM605]
gi|422752149|ref|ZP_16806053.1| ribosome GTPase EngA [Escherichia coli H252]
gi|422755893|ref|ZP_16809717.1| ribosome GTPase EngA [Escherichia coli H263]
gi|422837418|ref|ZP_16885391.1| GTP-binding protein engA [Escherichia coli H397]
gi|432358852|ref|ZP_19602072.1| GTPase Der [Escherichia coli KTE4]
gi|432363610|ref|ZP_19606774.1| GTPase Der [Escherichia coli KTE5]
gi|432382206|ref|ZP_19625149.1| GTPase Der [Escherichia coli KTE15]
gi|432574611|ref|ZP_19811089.1| GTPase Der [Escherichia coli KTE55]
gi|432588793|ref|ZP_19825149.1| GTPase Der [Escherichia coli KTE58]
gi|432598517|ref|ZP_19834791.1| GTPase Der [Escherichia coli KTE62]
gi|432612376|ref|ZP_19848538.1| GTPase Der [Escherichia coli KTE72]
gi|432647039|ref|ZP_19882828.1| GTPase Der [Escherichia coli KTE86]
gi|432656674|ref|ZP_19892377.1| GTPase Der [Escherichia coli KTE93]
gi|432733253|ref|ZP_19968082.1| GTPase Der [Escherichia coli KTE45]
gi|432755345|ref|ZP_19989893.1| GTPase Der [Escherichia coli KTE22]
gi|432760335|ref|ZP_19994829.1| GTPase Der [Escherichia coli KTE46]
gi|432779415|ref|ZP_20013648.1| GTPase Der [Escherichia coli KTE59]
gi|432788417|ref|ZP_20022547.1| GTPase Der [Escherichia coli KTE65]
gi|432821863|ref|ZP_20055554.1| GTPase Der [Escherichia coli KTE118]
gi|432828001|ref|ZP_20061650.1| GTPase Der [Escherichia coli KTE123]
gi|432905840|ref|ZP_20114640.1| GTPase Der [Escherichia coli KTE194]
gi|432938853|ref|ZP_20137096.1| GTPase Der [Escherichia coli KTE183]
gi|432972670|ref|ZP_20161536.1| GTPase Der [Escherichia coli KTE207]
gi|432986227|ref|ZP_20174948.1| GTPase Der [Escherichia coli KTE215]
gi|433005974|ref|ZP_20194402.1| GTPase Der [Escherichia coli KTE227]
gi|433008570|ref|ZP_20196986.1| GTPase Der [Escherichia coli KTE229]
gi|433039516|ref|ZP_20227114.1| GTPase Der [Escherichia coli KTE113]
gi|433083425|ref|ZP_20269881.1| GTPase Der [Escherichia coli KTE133]
gi|433102051|ref|ZP_20288131.1| GTPase Der [Escherichia coli KTE145]
gi|433154592|ref|ZP_20339530.1| GTPase Der [Escherichia coli KTE176]
gi|433164405|ref|ZP_20349140.1| GTPase Der [Escherichia coli KTE179]
gi|433169479|ref|ZP_20354104.1| GTPase Der [Escherichia coli KTE180]
gi|433189251|ref|ZP_20373348.1| GTPase Der [Escherichia coli KTE88]
gi|226741136|sp|B7MHZ6.1|DER_ECO45 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783154|sp|B7MYE6.1|DER_ECO81 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218366206|emb|CAR03954.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
coli S88]
gi|218428195|emb|CAR09112.2| GTPase involved in ribosome synthesis and maintenance [Escherichia
coli ED1a]
gi|222034222|emb|CAP76963.1| GTP-binding protein engA [Escherichia coli LF82]
gi|294491525|gb|ADE90281.1| ribosome-associated GTPase EngA [Escherichia coli IHE3034]
gi|305851813|gb|EFM52265.1| GTP-binding protein EngA [Escherichia coli NC101]
gi|307625933|gb|ADN70237.1| GTP-binding protein EngA [Escherichia coli UM146]
gi|312947088|gb|ADR27915.1| GTP-binding protein EngA [Escherichia coli O83:H1 str. NRG 857C]
gi|323949171|gb|EGB45062.1| ribosome GTPase EngA [Escherichia coli H252]
gi|323955752|gb|EGB51510.1| ribosome GTPase EngA [Escherichia coli H263]
gi|355350889|gb|EHG00084.1| GTP-binding protein EngA [Escherichia coli cloneA_i1]
gi|371615234|gb|EHO03662.1| GTP-binding protein engA [Escherichia coli H397]
gi|388410496|gb|EIL70720.1| GTP-binding protein EngA [Escherichia coli HM605]
gi|430876272|gb|ELB99791.1| GTPase Der [Escherichia coli KTE4]
gi|430885815|gb|ELC08685.1| GTPase Der [Escherichia coli KTE5]
gi|430907681|gb|ELC29179.1| GTPase Der [Escherichia coli KTE15]
gi|431107058|gb|ELE11246.1| GTPase Der [Escherichia coli KTE55]
gi|431121126|gb|ELE24124.1| GTPase Der [Escherichia coli KTE58]
gi|431130030|gb|ELE32139.1| GTPase Der [Escherichia coli KTE62]
gi|431148550|gb|ELE49841.1| GTPase Der [Escherichia coli KTE72]
gi|431179694|gb|ELE79586.1| GTPase Der [Escherichia coli KTE86]
gi|431190540|gb|ELE89939.1| GTPase Der [Escherichia coli KTE93]
gi|431274462|gb|ELF65519.1| GTPase Der [Escherichia coli KTE45]
gi|431301775|gb|ELF90976.1| GTPase Der [Escherichia coli KTE22]
gi|431307989|gb|ELF96279.1| GTPase Der [Escherichia coli KTE46]
gi|431326231|gb|ELG13593.1| GTPase Der [Escherichia coli KTE59]
gi|431336612|gb|ELG23720.1| GTPase Der [Escherichia coli KTE65]
gi|431367515|gb|ELG53992.1| GTPase Der [Escherichia coli KTE118]
gi|431371489|gb|ELG57198.1| GTPase Der [Escherichia coli KTE123]
gi|431431911|gb|ELH13685.1| GTPase Der [Escherichia coli KTE194]
gi|431462839|gb|ELH43046.1| GTPase Der [Escherichia coli KTE183]
gi|431480808|gb|ELH60524.1| GTPase Der [Escherichia coli KTE207]
gi|431499121|gb|ELH78302.1| GTPase Der [Escherichia coli KTE215]
gi|431513672|gb|ELH91754.1| GTPase Der [Escherichia coli KTE227]
gi|431523185|gb|ELI00329.1| GTPase Der [Escherichia coli KTE229]
gi|431550628|gb|ELI24617.1| GTPase Der [Escherichia coli KTE113]
gi|431601549|gb|ELI71065.1| GTPase Der [Escherichia coli KTE133]
gi|431618330|gb|ELI87304.1| GTPase Der [Escherichia coli KTE145]
gi|431673114|gb|ELJ39344.1| GTPase Der [Escherichia coli KTE176]
gi|431686680|gb|ELJ52240.1| GTPase Der [Escherichia coli KTE179]
gi|431686827|gb|ELJ52383.1| GTPase Der [Escherichia coli KTE180]
gi|431705168|gb|ELJ69766.1| GTPase Der [Escherichia coli KTE88]
Length = 490
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|432393023|ref|ZP_19635853.1| GTPase Der [Escherichia coli KTE21]
gi|430918179|gb|ELC39218.1| GTPase Der [Escherichia coli KTE21]
Length = 490
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|425289649|ref|ZP_18680489.1| ribosome-associated GTPase EngA [Escherichia coli 3006]
gi|432527273|ref|ZP_19764365.1| GTPase Der [Escherichia coli KTE233]
gi|408213024|gb|EKI37528.1| ribosome-associated GTPase EngA [Escherichia coli 3006]
gi|431063093|gb|ELD72350.1| GTPase Der [Escherichia coli KTE233]
Length = 490
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDLQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|193068430|ref|ZP_03049393.1| ribosome-associated GTPase EngA [Escherichia coli E110019]
gi|192958382|gb|EDV88822.1| ribosome-associated GTPase EngA [Escherichia coli E110019]
Length = 490
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|288941004|ref|YP_003443244.1| ribosome-associated GTPase EngA [Allochromatium vinosum DSM 180]
gi|288896376|gb|ADC62212.1| ribosome-associated GTPase EngA [Allochromatium vinosum DSM 180]
Length = 467
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/421 (47%), Positives = 287/421 (68%), Gaps = 9/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ L+GRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG G IG + ++I+DTGG
Sbjct: 1 MLPVITLIGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRQYGIGRIGPRPYVIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+GI M +Q ++A+ E+D ++F+VD R G +D I LR+ G+PI LV+NK
Sbjct: 61 G-TAAEGIEALMERQVQRAVEEADHLLFMVDTRDGCTPEDIDIAQRLRRLGKPITLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
S+ ++ ++++ DF+ LG+G+P SA G G++ ++++ LP +++ +I
Sbjct: 120 SDTMDPTLAVTDFHRLGLGDPWAASATQGLGVRGLIDHVFE-HLPESA---EEDAADIEH 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY--NNKKYILIDT 237
+ IKVA+VG+PN GKSTLIN LLGE R +T+D+PGTTRDSI FE ++++Y LIDT
Sbjct: 176 -DRIKVAVVGRPNAGKSTLINRLLGEERQVTFDSPGTTRDSIFIPFERPGHDQRYTLIDT 234
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR + + IEKFSVIKTL++I EANV+IL++DA + I QD +A I ESGR+L+
Sbjct: 235 AGLRRRARVHDPIEKFSVIKTLQAIEEANVIILVIDAHEGIGEQDATLAGHIIESGRALV 294
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V +NKWD + + R +++ +KL FL FA + +SA+ + + ++ ++ Y ++
Sbjct: 295 VAINKWDGLDPDARNRVRDQFARKLAFLDFAKLHRVSALYGSGVGHVLDDVDLAYANATR 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
LST +TR L +A+ H P R KLRYAHQGG+NPPIIVIHGN+ + YKRY
Sbjct: 355 DLSTPELTRLLEAAVMEHQPPLVHGRRIKLRYAHQGGRNPPIIVIHGNQTDVVPETYKRY 414
Query: 418 L 418
L
Sbjct: 415 L 415
>gi|218548052|ref|YP_002381843.1| GTP-binding protein EngA [Escherichia fergusonii ATCC 35469]
gi|331684159|ref|ZP_08384755.1| ribosome-associated GTPase EngA [Escherichia coli H299]
gi|416898704|ref|ZP_11928250.1| small GTP-binding domain protein [Escherichia coli STEC_7v]
gi|417115520|ref|ZP_11966656.1| ribosome-associated GTPase EngA [Escherichia coli 1.2741]
gi|422799824|ref|ZP_16848323.1| ribosome GTPase EngA [Escherichia coli M863]
gi|450191393|ref|ZP_21891202.1| GTP-binding protein Der [Escherichia coli SEPT362]
gi|226741141|sp|B7LKC7.1|DER_ESCF3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218355593|emb|CAQ88204.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
fergusonii ATCC 35469]
gi|323967959|gb|EGB63371.1| ribosome GTPase EngA [Escherichia coli M863]
gi|327252218|gb|EGE63890.1| small GTP-binding domain protein [Escherichia coli STEC_7v]
gi|331079111|gb|EGI50313.1| ribosome-associated GTPase EngA [Escherichia coli H299]
gi|386140939|gb|EIG82091.1| ribosome-associated GTPase EngA [Escherichia coli 1.2741]
gi|449319540|gb|EMD09589.1| GTP-binding protein Der [Escherichia coli SEPT362]
Length = 490
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|422358126|ref|ZP_16438787.1| ribosome-associated GTPase EngA [Escherichia coli MS 110-3]
gi|422380260|ref|ZP_16460439.1| ribosome-associated GTPase EngA [Escherichia coli MS 57-2]
gi|315288063|gb|EFU47463.1| ribosome-associated GTPase EngA [Escherichia coli MS 110-3]
gi|324008519|gb|EGB77738.1| ribosome-associated GTPase EngA [Escherichia coli MS 57-2]
Length = 499
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|300898385|ref|ZP_07116728.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1]
gi|300940238|ref|ZP_07154836.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1]
gi|300357925|gb|EFJ73795.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1]
gi|300454934|gb|EFK18427.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1]
Length = 499
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|432441977|ref|ZP_19684317.1| GTPase Der [Escherichia coli KTE189]
gi|432447083|ref|ZP_19689382.1| GTPase Der [Escherichia coli KTE191]
gi|432617653|ref|ZP_19853766.1| GTPase Der [Escherichia coli KTE75]
gi|432899588|ref|ZP_20110177.1| GTPase Der [Escherichia coli KTE192]
gi|433014793|ref|ZP_20203135.1| GTPase Der [Escherichia coli KTE104]
gi|433024365|ref|ZP_20212346.1| GTPase Der [Escherichia coli KTE106]
gi|433029449|ref|ZP_20217305.1| GTPase Der [Escherichia coli KTE109]
gi|433199168|ref|ZP_20383065.1| GTPase Der [Escherichia coli KTE94]
gi|433322943|ref|ZP_20400332.1| GTP-binding protein Der [Escherichia coli J96]
gi|430966431|gb|ELC83839.1| GTPase Der [Escherichia coli KTE189]
gi|430973356|gb|ELC90324.1| GTPase Der [Escherichia coli KTE191]
gi|431153641|gb|ELE54545.1| GTPase Der [Escherichia coli KTE75]
gi|431425717|gb|ELH07785.1| GTPase Der [Escherichia coli KTE192]
gi|431529779|gb|ELI06474.1| GTPase Der [Escherichia coli KTE104]
gi|431534426|gb|ELI10909.1| GTPase Der [Escherichia coli KTE106]
gi|431542501|gb|ELI17668.1| GTPase Der [Escherichia coli KTE109]
gi|431720553|gb|ELJ84580.1| GTPase Der [Escherichia coli KTE94]
gi|432348516|gb|ELL42966.1| GTP-binding protein Der [Escherichia coli J96]
Length = 490
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEADDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|110642676|ref|YP_670406.1| GTP-binding protein EngA [Escherichia coli 536]
gi|161486155|ref|NP_754915.2| GTP-binding protein EngA [Escherichia coli CFT073]
gi|191172582|ref|ZP_03034121.1| ribosome-associated GTPase EngA [Escherichia coli F11]
gi|218701021|ref|YP_002408650.1| GTP-binding protein EngA [Escherichia coli IAI39]
gi|312965427|ref|ZP_07779659.1| small GTP-binding domain protein [Escherichia coli 2362-75]
gi|386620118|ref|YP_006139698.1| putative GTP-binding protein [Escherichia coli NA114]
gi|386625248|ref|YP_006144976.1| GTPase, multicopy suppressor of ftsJ [Escherichia coli O7:K1 str.
CE10]
gi|386640042|ref|YP_006106840.1| GTP-binding protein EngA [Escherichia coli ABU 83972]
gi|387830408|ref|YP_003350345.1| putative GTP-binding protein [Escherichia coli SE15]
gi|415840210|ref|ZP_11521699.1| small GTP-binding domain protein [Escherichia coli RN587/1]
gi|416335665|ref|ZP_11672358.1| GTP-binding protein EngA [Escherichia coli WV_060327]
gi|417281586|ref|ZP_12068886.1| ribosome-associated GTPase EngA [Escherichia coli 3003]
gi|417663068|ref|ZP_12312649.1| GTP-binding protein EngA [Escherichia coli AA86]
gi|417756768|ref|ZP_12404842.1| small GTP-binding domain protein [Escherichia coli DEC2B]
gi|418997396|ref|ZP_13544990.1| small GTP-binding domain protein [Escherichia coli DEC1A]
gi|419003065|ref|ZP_13550589.1| small GTP-binding domain protein [Escherichia coli DEC1B]
gi|419008748|ref|ZP_13556179.1| small GTP-binding domain protein [Escherichia coli DEC1C]
gi|419014422|ref|ZP_13561770.1| GTPase Der [Escherichia coli DEC1D]
gi|419019440|ref|ZP_13566746.1| small GTP-binding domain protein [Escherichia coli DEC1E]
gi|419024940|ref|ZP_13572166.1| GTPase Der [Escherichia coli DEC2A]
gi|419029977|ref|ZP_13577138.1| small GTP-binding domain protein [Escherichia coli DEC2C]
gi|419035402|ref|ZP_13582488.1| small GTP-binding domain protein [Escherichia coli DEC2D]
gi|419040663|ref|ZP_13587691.1| small GTP-binding domain protein [Escherichia coli DEC2E]
gi|419914739|ref|ZP_14433127.1| GTP-binding protein EngA [Escherichia coli KD1]
gi|425278912|ref|ZP_18670150.1| ribosome-associated GTPase EngA [Escherichia coli ARS4.2123]
gi|425301366|ref|ZP_18691257.1| ribosome-associated GTPase EngA [Escherichia coli 07798]
gi|432398467|ref|ZP_19641246.1| GTPase Der [Escherichia coli KTE25]
gi|432407592|ref|ZP_19650300.1| GTPase Der [Escherichia coli KTE28]
gi|432412684|ref|ZP_19655346.1| GTPase Der [Escherichia coli KTE39]
gi|432422863|ref|ZP_19665407.1| GTPase Der [Escherichia coli KTE178]
gi|432432760|ref|ZP_19675187.1| GTPase Der [Escherichia coli KTE187]
gi|432437243|ref|ZP_19679631.1| GTPase Der [Escherichia coli KTE188]
gi|432457583|ref|ZP_19699765.1| GTPase Der [Escherichia coli KTE201]
gi|432466700|ref|ZP_19708787.1| GTPase Der [Escherichia coli KTE205]
gi|432471838|ref|ZP_19713882.1| GTPase Der [Escherichia coli KTE206]
gi|432496579|ref|ZP_19738375.1| GTPase Der [Escherichia coli KTE214]
gi|432501003|ref|ZP_19742760.1| GTPase Der [Escherichia coli KTE216]
gi|432505322|ref|ZP_19747045.1| GTPase Der [Escherichia coli KTE220]
gi|432524716|ref|ZP_19761843.1| GTPase Der [Escherichia coli KTE230]
gi|432554558|ref|ZP_19791279.1| GTPase Der [Escherichia coli KTE47]
gi|432559726|ref|ZP_19796395.1| GTPase Der [Escherichia coli KTE49]
gi|432569605|ref|ZP_19806115.1| GTPase Der [Escherichia coli KTE53]
gi|432584726|ref|ZP_19821118.1| GTPase Der [Escherichia coli KTE57]
gi|432593737|ref|ZP_19830052.1| GTPase Der [Escherichia coli KTE60]
gi|432608405|ref|ZP_19844589.1| GTPase Der [Escherichia coli KTE67]
gi|432652045|ref|ZP_19887798.1| GTPase Der [Escherichia coli KTE87]
gi|432695330|ref|ZP_19930528.1| GTPase Der [Escherichia coli KTE162]
gi|432711531|ref|ZP_19946589.1| GTPase Der [Escherichia coli KTE6]
gi|432714251|ref|ZP_19949288.1| GTPase Der [Escherichia coli KTE8]
gi|432723987|ref|ZP_19958904.1| GTPase Der [Escherichia coli KTE17]
gi|432728568|ref|ZP_19963446.1| GTPase Der [Escherichia coli KTE18]
gi|432742252|ref|ZP_19976971.1| GTPase Der [Escherichia coli KTE23]
gi|432784436|ref|ZP_20018615.1| GTPase Der [Escherichia coli KTE63]
gi|432845473|ref|ZP_20078273.1| GTPase Der [Escherichia coli KTE141]
gi|432895485|ref|ZP_20107205.1| GTPase Der [Escherichia coli KTE165]
gi|432920490|ref|ZP_20124125.1| GTPase Der [Escherichia coli KTE173]
gi|432928087|ref|ZP_20129340.1| GTPase Der [Escherichia coli KTE175]
gi|432974672|ref|ZP_20163509.1| GTPase Der [Escherichia coli KTE209]
gi|432981890|ref|ZP_20170665.1| GTPase Der [Escherichia coli KTE211]
gi|432991618|ref|ZP_20180282.1| GTPase Der [Escherichia coli KTE217]
gi|432996227|ref|ZP_20184813.1| GTPase Der [Escherichia coli KTE218]
gi|433000798|ref|ZP_20189322.1| GTPase Der [Escherichia coli KTE223]
gi|433058997|ref|ZP_20246040.1| GTPase Der [Escherichia coli KTE124]
gi|433073740|ref|ZP_20260391.1| GTPase Der [Escherichia coli KTE129]
gi|433078691|ref|ZP_20265219.1| GTPase Der [Escherichia coli KTE131]
gi|433088204|ref|ZP_20274574.1| GTPase Der [Escherichia coli KTE137]
gi|433097332|ref|ZP_20283515.1| GTPase Der [Escherichia coli KTE139]
gi|433106776|ref|ZP_20292748.1| GTPase Der [Escherichia coli KTE148]
gi|433111752|ref|ZP_20297613.1| GTPase Der [Escherichia coli KTE150]
gi|433116410|ref|ZP_20302199.1| GTPase Der [Escherichia coli KTE153]
gi|433121070|ref|ZP_20306740.1| GTPase Der [Escherichia coli KTE157]
gi|433126080|ref|ZP_20311635.1| GTPase Der [Escherichia coli KTE160]
gi|433140148|ref|ZP_20325401.1| GTPase Der [Escherichia coli KTE167]
gi|433150065|ref|ZP_20335083.1| GTPase Der [Escherichia coli KTE174]
gi|433184215|ref|ZP_20368460.1| GTPase Der [Escherichia coli KTE85]
gi|433208644|ref|ZP_20392318.1| GTPase Der [Escherichia coli KTE97]
gi|433213428|ref|ZP_20397018.1| GTPase Der [Escherichia coli KTE99]
gi|442608257|ref|ZP_21023017.1| GTP-binding protein EngA [Escherichia coli Nissle 1917]
gi|31563151|sp|Q8FF59.2|DER_ECOL6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123147831|sp|Q0TEX4.1|DER_ECOL5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226741137|sp|B7NQW0.1|DER_ECO7I RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|110344268|gb|ABG70505.1| probable GTP-binding protein EngA [Escherichia coli 536]
gi|190907055|gb|EDV66655.1| ribosome-associated GTPase EngA [Escherichia coli F11]
gi|218371007|emb|CAR18835.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
coli IAI39]
gi|281179565|dbj|BAI55895.1| putative GTP-binding protein [Escherichia coli SE15]
gi|307554534|gb|ADN47309.1| GTP-binding protein EngA [Escherichia coli ABU 83972]
gi|312289847|gb|EFR17735.1| small GTP-binding domain protein [Escherichia coli 2362-75]
gi|320196348|gb|EFW70972.1| GTP-binding protein EngA [Escherichia coli WV_060327]
gi|323188371|gb|EFZ73663.1| small GTP-binding domain protein [Escherichia coli RN587/1]
gi|330912286|gb|EGH40796.1| GTP-binding protein EngA [Escherichia coli AA86]
gi|333970619|gb|AEG37424.1| putative GTP-binding protein [Escherichia coli NA114]
gi|349738985|gb|AEQ13691.1| GTPase, multicopy suppressor of ftsJ [Escherichia coli O7:K1 str.
CE10]
gi|377843223|gb|EHU08263.1| small GTP-binding domain protein [Escherichia coli DEC1A]
gi|377844266|gb|EHU09303.1| small GTP-binding domain protein [Escherichia coli DEC1C]
gi|377846668|gb|EHU11675.1| small GTP-binding domain protein [Escherichia coli DEC1B]
gi|377856390|gb|EHU21250.1| GTPase Der [Escherichia coli DEC1D]
gi|377859443|gb|EHU24274.1| small GTP-binding domain protein [Escherichia coli DEC1E]
gi|377863724|gb|EHU28529.1| GTPase Der [Escherichia coli DEC2A]
gi|377873342|gb|EHU37979.1| small GTP-binding domain protein [Escherichia coli DEC2B]
gi|377876977|gb|EHU41575.1| small GTP-binding domain protein [Escherichia coli DEC2C]
gi|377879758|gb|EHU44330.1| small GTP-binding domain protein [Escherichia coli DEC2D]
gi|377890703|gb|EHU55160.1| small GTP-binding domain protein [Escherichia coli DEC2E]
gi|386245915|gb|EII87645.1| ribosome-associated GTPase EngA [Escherichia coli 3003]
gi|388385709|gb|EIL47380.1| GTP-binding protein EngA [Escherichia coli KD1]
gi|408200544|gb|EKI25721.1| ribosome-associated GTPase EngA [Escherichia coli ARS4.2123]
gi|408212758|gb|EKI37271.1| ribosome-associated GTPase EngA [Escherichia coli 07798]
gi|430914715|gb|ELC35810.1| GTPase Der [Escherichia coli KTE25]
gi|430929066|gb|ELC49587.1| GTPase Der [Escherichia coli KTE28]
gi|430934539|gb|ELC54894.1| GTPase Der [Escherichia coli KTE39]
gi|430943599|gb|ELC63706.1| GTPase Der [Escherichia coli KTE178]
gi|430952128|gb|ELC71335.1| GTPase Der [Escherichia coli KTE187]
gi|430962574|gb|ELC80431.1| GTPase Der [Escherichia coli KTE188]
gi|430981590|gb|ELC98317.1| GTPase Der [Escherichia coli KTE201]
gi|430992983|gb|ELD09342.1| GTPase Der [Escherichia coli KTE205]
gi|430997580|gb|ELD13841.1| GTPase Der [Escherichia coli KTE206]
gi|431023837|gb|ELD37032.1| GTPase Der [Escherichia coli KTE214]
gi|431028580|gb|ELD41624.1| GTPase Der [Escherichia coli KTE216]
gi|431037672|gb|ELD48648.1| GTPase Der [Escherichia coli KTE220]
gi|431051167|gb|ELD60842.1| GTPase Der [Escherichia coli KTE230]
gi|431083223|gb|ELD89530.1| GTPase Der [Escherichia coli KTE47]
gi|431090946|gb|ELD96697.1| GTPase Der [Escherichia coli KTE49]
gi|431099095|gb|ELE04396.1| GTPase Der [Escherichia coli KTE53]
gi|431115480|gb|ELE18983.1| GTPase Der [Escherichia coli KTE57]
gi|431127065|gb|ELE29380.1| GTPase Der [Escherichia coli KTE60]
gi|431137349|gb|ELE39196.1| GTPase Der [Escherichia coli KTE67]
gi|431189900|gb|ELE89317.1| GTPase Der [Escherichia coli KTE87]
gi|431233418|gb|ELF29009.1| GTPase Der [Escherichia coli KTE162]
gi|431248483|gb|ELF42677.1| GTPase Der [Escherichia coli KTE6]
gi|431256101|gb|ELF49178.1| GTPase Der [Escherichia coli KTE8]
gi|431264579|gb|ELF56284.1| GTPase Der [Escherichia coli KTE17]
gi|431273120|gb|ELF64218.1| GTPase Der [Escherichia coli KTE18]
gi|431283943|gb|ELF74802.1| GTPase Der [Escherichia coli KTE23]
gi|431328859|gb|ELG16163.1| GTPase Der [Escherichia coli KTE63]
gi|431394329|gb|ELG77865.1| GTPase Der [Escherichia coli KTE141]
gi|431421852|gb|ELH04064.1| GTPase Der [Escherichia coli KTE165]
gi|431441692|gb|ELH22800.1| GTPase Der [Escherichia coli KTE173]
gi|431443052|gb|ELH24130.1| GTPase Der [Escherichia coli KTE175]
gi|431488404|gb|ELH68039.1| GTPase Der [Escherichia coli KTE209]
gi|431491199|gb|ELH70806.1| GTPase Der [Escherichia coli KTE211]
gi|431495700|gb|ELH75286.1| GTPase Der [Escherichia coli KTE217]
gi|431505257|gb|ELH83879.1| GTPase Der [Escherichia coli KTE218]
gi|431508190|gb|ELH86464.1| GTPase Der [Escherichia coli KTE223]
gi|431568530|gb|ELI41503.1| GTPase Der [Escherichia coli KTE124]
gi|431587108|gb|ELI58489.1| GTPase Der [Escherichia coli KTE129]
gi|431595815|gb|ELI65802.1| GTPase Der [Escherichia coli KTE131]
gi|431603981|gb|ELI73397.1| GTPase Der [Escherichia coli KTE137]
gi|431614913|gb|ELI84047.1| GTPase Der [Escherichia coli KTE139]
gi|431626484|gb|ELI95033.1| GTPase Der [Escherichia coli KTE148]
gi|431627495|gb|ELI95897.1| GTPase Der [Escherichia coli KTE150]
gi|431633231|gb|ELJ01512.1| GTPase Der [Escherichia coli KTE153]
gi|431641770|gb|ELJ09504.1| GTPase Der [Escherichia coli KTE157]
gi|431643592|gb|ELJ11283.1| GTPase Der [Escherichia coli KTE160]
gi|431659152|gb|ELJ26050.1| GTPase Der [Escherichia coli KTE167]
gi|431669859|gb|ELJ36224.1| GTPase Der [Escherichia coli KTE174]
gi|431705312|gb|ELJ69909.1| GTPase Der [Escherichia coli KTE85]
gi|431729929|gb|ELJ93548.1| GTPase Der [Escherichia coli KTE97]
gi|431734453|gb|ELJ97854.1| GTPase Der [Escherichia coli KTE99]
gi|441710862|emb|CCQ08994.1| GTP-binding protein EngA [Escherichia coli Nissle 1917]
Length = 490
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|417624466|ref|ZP_12274765.1| small GTP-binding domain protein [Escherichia coli STEC_H.1.8]
gi|345377427|gb|EGX09359.1| small GTP-binding domain protein [Escherichia coli STEC_H.1.8]
Length = 490
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 291/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E + ++
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVDEYA 176
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 177 -EYWEQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|416299203|ref|ZP_11652284.1| GTP-binding protein EngA [Shigella flexneri CDC 796-83]
gi|417683132|ref|ZP_12332482.1| small GTP-binding domain protein [Shigella boydii 3594-74]
gi|420326668|ref|ZP_14828419.1| GTPase Der [Shigella flexneri CCH060]
gi|420353927|ref|ZP_14855027.1| GTPase Der [Shigella boydii 4444-74]
gi|421683595|ref|ZP_16123388.1| small GTP-binding domain protein [Shigella flexneri 1485-80]
gi|320185211|gb|EFW59991.1| GTP-binding protein EngA [Shigella flexneri CDC 796-83]
gi|332092745|gb|EGI97814.1| small GTP-binding domain protein [Shigella boydii 3594-74]
gi|391250185|gb|EIQ09408.1| GTPase Der [Shigella flexneri CCH060]
gi|391277260|gb|EIQ36010.1| GTPase Der [Shigella boydii 4444-74]
gi|404337951|gb|EJZ64399.1| small GTP-binding domain protein [Shigella flexneri 1485-80]
Length = 490
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEVEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|90111450|ref|NP_417006.2| GTPase; multicopy suppressor of ftsJ [Escherichia coli str. K-12
substr. MG1655]
gi|157156728|ref|YP_001463833.1| GTP-binding protein EngA [Escherichia coli E24377A]
gi|157161986|ref|YP_001459304.1| GTP-binding protein EngA [Escherichia coli HS]
gi|161367551|ref|NP_289064.2| GTP-binding protein EngA [Escherichia coli O157:H7 str. EDL933]
gi|162139766|ref|NP_311400.2| GTP-binding protein EngA [Escherichia coli O157:H7 str. Sakai]
gi|168748430|ref|ZP_02773452.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4113]
gi|168756283|ref|ZP_02781290.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4401]
gi|168761121|ref|ZP_02786128.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4501]
gi|168768603|ref|ZP_02793610.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4486]
gi|168773575|ref|ZP_02798582.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4196]
gi|168778477|ref|ZP_02803484.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4076]
gi|168787857|ref|ZP_02812864.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC869]
gi|168798882|ref|ZP_02823889.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC508]
gi|170019206|ref|YP_001724160.1| GTP-binding protein EngA [Escherichia coli ATCC 8739]
gi|170082121|ref|YP_001731441.1| GTP-binding protein EngA [Escherichia coli str. K-12 substr. DH10B]
gi|188494621|ref|ZP_03001891.1| GTP-binding protein EngA [Escherichia coli 53638]
gi|191167672|ref|ZP_03029481.1| ribosome-associated GTPase EngA [Escherichia coli B7A]
gi|193064026|ref|ZP_03045111.1| ribosome-associated GTPase EngA [Escherichia coli E22]
gi|194427302|ref|ZP_03059852.1| ribosome-associated GTPase EngA [Escherichia coli B171]
gi|194437572|ref|ZP_03069668.1| ribosome-associated GTPase EngA [Escherichia coli 101-1]
gi|195936653|ref|ZP_03082035.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC4024]
gi|208814338|ref|ZP_03255667.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4045]
gi|208821434|ref|ZP_03261754.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4042]
gi|209399678|ref|YP_002271981.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC4115]
gi|209919988|ref|YP_002294072.1| GTP-binding protein EngA [Escherichia coli SE11]
gi|217326913|ref|ZP_03442996.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
TW14588]
gi|218555036|ref|YP_002387949.1| GTP-binding protein EngA [Escherichia coli IAI1]
gi|218696138|ref|YP_002403805.1| GTP-binding protein EngA [Escherichia coli 55989]
gi|238901676|ref|YP_002927472.1| GTP-binding protein EngA [Escherichia coli BW2952]
gi|251785836|ref|YP_003000140.1| 50S ribosomal subunit stability factor [Escherichia coli BL21(DE3)]
gi|253772595|ref|YP_003035426.1| GTP-binding protein EngA [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254162485|ref|YP_003045593.1| GTP-binding protein EngA [Escherichia coli B str. REL606]
gi|254289246|ref|YP_003054994.1| GTP-binding protein EngA [Escherichia coli BL21(DE3)]
gi|254794457|ref|YP_003079294.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. TW14359]
gi|260845141|ref|YP_003222919.1| GTP-binding protein Der [Escherichia coli O103:H2 str. 12009]
gi|260856605|ref|YP_003230496.1| GTP-binding protein EngA [Escherichia coli O26:H11 str. 11368]
gi|260869200|ref|YP_003235602.1| putative GTP-binding protein Der [Escherichia coli O111:H- str.
11128]
gi|261223057|ref|ZP_05937338.1| 50S ribosome associated factor involved in the biogenesis and
stability of 50S ribosomal subunits [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259392|ref|ZP_05951925.1| putative GTP-binding protein Der [Escherichia coli O157:H7 str.
FRIK966]
gi|291283732|ref|YP_003500550.1| GTP-binding protein engA [Escherichia coli O55:H7 str. CB9615]
gi|293415776|ref|ZP_06658419.1| ribosome-associated GTPase EngA [Escherichia coli B185]
gi|293446864|ref|ZP_06663286.1| ribosome-associated GTPase EngA [Escherichia coli B088]
gi|301022369|ref|ZP_07186258.1| ribosome-associated GTPase EngA [Escherichia coli MS 196-1]
gi|307312494|ref|ZP_07592127.1| ribosome-associated GTPase EngA [Escherichia coli W]
gi|312973248|ref|ZP_07787420.1| small GTP-binding domain protein [Escherichia coli 1827-70]
gi|331669257|ref|ZP_08370105.1| ribosome-associated GTPase EngA [Escherichia coli TA271]
gi|378712028|ref|YP_005276921.1| ribosome-associated GTPase EngA [Escherichia coli KO11FL]
gi|386281578|ref|ZP_10059240.1| GTPase Der [Escherichia sp. 4_1_40B]
gi|386594720|ref|YP_006091120.1| small GTP-binding protein [Escherichia coli DH1]
gi|386609913|ref|YP_006125399.1| GTP-binding protein [Escherichia coli W]
gi|386615214|ref|YP_006134880.1| hypothetical protein UMNK88_3161 [Escherichia coli UMNK88]
gi|386700543|ref|YP_006164380.1| GTP-binding protein Der [Escherichia coli KO11FL]
gi|386705776|ref|YP_006169623.1| GTP-binding protein engA [Escherichia coli P12b]
gi|386710401|ref|YP_006174122.1| GTP-binding protein Der [Escherichia coli W]
gi|387613107|ref|YP_006116223.1| GTP-binding protein [Escherichia coli ETEC H10407]
gi|387622211|ref|YP_006129839.1| GTP-binding protein engA [Escherichia coli DH1]
gi|387883705|ref|YP_006314007.1| GTP-binding protein EngA [Escherichia coli Xuzhou21]
gi|388478547|ref|YP_490739.1| GTP-binding protein [Escherichia coli str. K-12 substr. W3110]
gi|404375852|ref|ZP_10981032.1| GTPase Der [Escherichia sp. 1_1_43]
gi|407470407|ref|YP_006783150.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407480931|ref|YP_006778080.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2011C-3493]
gi|410481497|ref|YP_006769043.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415778567|ref|ZP_11489613.1| small GTP-binding domain protein [Escherichia coli 3431]
gi|415784561|ref|ZP_11492382.1| small GTP-binding domain protein [Escherichia coli EPECa14]
gi|415803706|ref|ZP_11500685.1| small GTP-binding domain protein [Escherichia coli E128010]
gi|415815177|ref|ZP_11506697.1| small GTP-binding domain protein [Escherichia coli LT-68]
gi|415822432|ref|ZP_11511060.1| small GTP-binding domain protein [Escherichia coli OK1180]
gi|415828724|ref|ZP_11515196.1| small GTP-binding domain protein [Escherichia coli OK1357]
gi|416283491|ref|ZP_11646833.1| GTP-binding protein EngA [Shigella boydii ATCC 9905]
gi|416309997|ref|ZP_11656196.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1044]
gi|416321664|ref|ZP_11663512.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC1212]
gi|416329938|ref|ZP_11669065.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1125]
gi|416344043|ref|ZP_11677943.1| GTP-binding protein EngA [Escherichia coli EC4100B]
gi|416775875|ref|ZP_11874611.1| GTP-binding protein Der [Escherichia coli O157:H7 str. G5101]
gi|416787459|ref|ZP_11879523.1| GTP-binding protein Der [Escherichia coli O157:H- str. 493-89]
gi|416799089|ref|ZP_11884438.1| GTP-binding protein Der [Escherichia coli O157:H- str. H 2687]
gi|416809521|ref|ZP_11889123.1| GTP-binding protein Der [Escherichia coli O55:H7 str. 3256-97]
gi|416820192|ref|ZP_11893681.1| GTP-binding protein Der [Escherichia coli O55:H7 str. USDA 5905]
gi|416831012|ref|ZP_11898971.1| GTP-binding protein Der [Escherichia coli O157:H7 str. LSU-61]
gi|417122159|ref|ZP_11971417.1| ribosome-associated GTPase EngA [Escherichia coli 97.0246]
gi|417134397|ref|ZP_11979182.1| ribosome-associated GTPase EngA [Escherichia coli 5.0588]
gi|417140800|ref|ZP_11983911.1| ribosome-associated GTPase EngA [Escherichia coli 97.0259]
gi|417145952|ref|ZP_11986910.1| ribosome-associated GTPase EngA [Escherichia coli 1.2264]
gi|417154959|ref|ZP_11993088.1| ribosome-associated GTPase EngA [Escherichia coli 96.0497]
gi|417163678|ref|ZP_11998866.1| ribosome-associated GTPase EngA [Escherichia coli 99.0741]
gi|417176086|ref|ZP_12005882.1| ribosome-associated GTPase EngA [Escherichia coli 3.2608]
gi|417185144|ref|ZP_12010640.1| ribosome-associated GTPase EngA [Escherichia coli 93.0624]
gi|417189178|ref|ZP_12012736.1| ribosome-associated GTPase EngA [Escherichia coli 4.0522]
gi|417207703|ref|ZP_12019924.1| ribosome-associated GTPase EngA [Escherichia coli JB1-95]
gi|417221201|ref|ZP_12024641.1| ribosome-associated GTPase EngA [Escherichia coli 96.154]
gi|417231348|ref|ZP_12032746.1| ribosome-associated GTPase EngA [Escherichia coli 5.0959]
gi|417237685|ref|ZP_12035416.1| ribosome-associated GTPase EngA [Escherichia coli 9.0111]
gi|417251795|ref|ZP_12043560.1| ribosome-associated GTPase EngA [Escherichia coli 4.0967]
gi|417261490|ref|ZP_12048978.1| ribosome-associated GTPase EngA [Escherichia coli 2.3916]
gi|417269294|ref|ZP_12056654.1| ribosome-associated GTPase EngA [Escherichia coli 3.3884]
gi|417272940|ref|ZP_12060289.1| ribosome-associated GTPase EngA [Escherichia coli 2.4168]
gi|417278163|ref|ZP_12065479.1| ribosome-associated GTPase EngA [Escherichia coli 3.2303]
gi|417290760|ref|ZP_12078041.1| ribosome-associated GTPase EngA [Escherichia coli B41]
gi|417299962|ref|ZP_12087189.1| ribosome-associated GTPase EngA [Escherichia coli 900105 (10e)]
gi|417308996|ref|ZP_12095837.1| GTPase Der [Escherichia coli PCN033]
gi|417582014|ref|ZP_12232816.1| small GTP-binding domain protein [Escherichia coli STEC_B2F1]
gi|417592846|ref|ZP_12243541.1| small GTP-binding domain protein [Escherichia coli 2534-86]
gi|417597817|ref|ZP_12248453.1| small GTP-binding domain protein [Escherichia coli 3030-1]
gi|417609136|ref|ZP_12259639.1| small GTP-binding domain protein [Escherichia coli STEC_DG131-3]
gi|417613977|ref|ZP_12264435.1| small GTP-binding domain protein [Escherichia coli STEC_EH250]
gi|417619095|ref|ZP_12269509.1| small GTP-binding domain protein [Escherichia coli G58-1]
gi|417629810|ref|ZP_12280047.1| small GTP-binding domain protein [Escherichia coli STEC_MHI813]
gi|417635483|ref|ZP_12285695.1| small GTP-binding domain protein [Escherichia coli STEC_S1191]
gi|417640264|ref|ZP_12290405.1| small GTP-binding domain protein [Escherichia coli TX1999]
gi|417667913|ref|ZP_12317458.1| small GTP-binding domain protein [Escherichia coli STEC_O31]
gi|417708568|ref|ZP_12357599.1| small GTP-binding domain protein [Shigella flexneri VA-6]
gi|417806062|ref|ZP_12453008.1| GTP-binding protein Der [Escherichia coli O104:H4 str. LB226692]
gi|417833805|ref|ZP_12480252.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 01-09591]
gi|417863150|ref|ZP_12508198.1| engA [Escherichia coli O104:H4 str. C227-11]
gi|417943685|ref|ZP_12586932.1| GTP-binding protein Der [Escherichia coli XH140A]
gi|417975808|ref|ZP_12616605.1| GTP-binding protein Der [Escherichia coli XH001]
gi|418303960|ref|ZP_12915754.1| small GTP-binding domain protein [Escherichia coli UMNF18]
gi|418941808|ref|ZP_13495120.1| GTP-binding protein Der [Escherichia coli O157:H43 str. T22]
gi|419046239|ref|ZP_13593176.1| small GTP-binding domain protein [Escherichia coli DEC3A]
gi|419052222|ref|ZP_13599093.1| small GTP-binding domain protein [Escherichia coli DEC3B]
gi|419058257|ref|ZP_13605062.1| small GTP-binding domain protein [Escherichia coli DEC3C]
gi|419063724|ref|ZP_13610451.1| small GTP-binding domain protein [Escherichia coli DEC3D]
gi|419070622|ref|ZP_13616243.1| small GTP-binding domain protein [Escherichia coli DEC3E]
gi|419076590|ref|ZP_13622104.1| small GTP-binding domain protein [Escherichia coli DEC3F]
gi|419081703|ref|ZP_13627151.1| small GTP-binding domain protein [Escherichia coli DEC4A]
gi|419087558|ref|ZP_13632914.1| small GTP-binding domain protein [Escherichia coli DEC4B]
gi|419093314|ref|ZP_13638599.1| small GTP-binding domain protein [Escherichia coli DEC4C]
gi|419099259|ref|ZP_13644456.1| small GTP-binding domain protein [Escherichia coli DEC4D]
gi|419105075|ref|ZP_13650204.1| small GTP-binding domain protein [Escherichia coli DEC4E]
gi|419110535|ref|ZP_13655591.1| small GTP-binding domain protein [Escherichia coli DEC4F]
gi|419115894|ref|ZP_13660910.1| small GTP-binding domain protein [Escherichia coli DEC5A]
gi|419121465|ref|ZP_13666421.1| small GTP-binding domain protein [Escherichia coli DEC5B]
gi|419137561|ref|ZP_13682356.1| GTPase Der [Escherichia coli DEC5E]
gi|419143461|ref|ZP_13688199.1| GTPase Der [Escherichia coli DEC6A]
gi|419149140|ref|ZP_13693793.1| small GTP-binding domain protein [Escherichia coli DEC6B]
gi|419154910|ref|ZP_13699471.1| GTPase Der [Escherichia coli DEC6C]
gi|419160197|ref|ZP_13704702.1| GTPase Der [Escherichia coli DEC6D]
gi|419165314|ref|ZP_13709770.1| small GTP-binding domain protein [Escherichia coli DEC6E]
gi|419171180|ref|ZP_13715066.1| GTPase Der [Escherichia coli DEC7A]
gi|419176082|ref|ZP_13719898.1| small GTP-binding domain protein [Escherichia coli DEC7B]
gi|419181811|ref|ZP_13725424.1| small GTP-binding domain protein [Escherichia coli DEC7C]
gi|419187258|ref|ZP_13730772.1| small GTP-binding domain protein [Escherichia coli DEC7D]
gi|419192557|ref|ZP_13736009.1| GTPase Der [Escherichia coli DEC7E]
gi|419198011|ref|ZP_13741397.1| GTPase Der [Escherichia coli DEC8A]
gi|419204462|ref|ZP_13747642.1| small GTP-binding domain protein [Escherichia coli DEC8B]
gi|419210740|ref|ZP_13753817.1| small GTP-binding domain protein [Escherichia coli DEC8C]
gi|419216601|ref|ZP_13759600.1| small GTP-binding domain protein [Escherichia coli DEC8D]
gi|419222520|ref|ZP_13765441.1| small GTP-binding domain protein [Escherichia coli DEC8E]
gi|419227866|ref|ZP_13770717.1| small GTP-binding domain protein [Escherichia coli DEC9A]
gi|419233455|ref|ZP_13776230.1| small GTP-binding domain protein [Escherichia coli DEC9B]
gi|419238879|ref|ZP_13781594.1| small GTP-binding domain protein [Escherichia coli DEC9C]
gi|419244356|ref|ZP_13786994.1| small GTP-binding domain protein [Escherichia coli DEC9D]
gi|419250167|ref|ZP_13792746.1| small GTP-binding domain protein [Escherichia coli DEC9E]
gi|419255993|ref|ZP_13798506.1| small GTP-binding domain protein [Escherichia coli DEC10A]
gi|419262303|ref|ZP_13804717.1| small GTP-binding domain protein [Escherichia coli DEC10B]
gi|419268213|ref|ZP_13810565.1| small GTP-binding domain protein [Escherichia coli DEC10C]
gi|419273743|ref|ZP_13816038.1| small GTP-binding domain protein [Escherichia coli DEC10D]
gi|419279044|ref|ZP_13821290.1| small GTP-binding domain protein [Escherichia coli DEC10E]
gi|419285211|ref|ZP_13827382.1| small GTP-binding domain protein [Escherichia coli DEC10F]
gi|419290439|ref|ZP_13832531.1| small GTP-binding domain protein [Escherichia coli DEC11A]
gi|419295833|ref|ZP_13837876.1| small GTP-binding domain protein [Escherichia coli DEC11B]
gi|419301228|ref|ZP_13843227.1| GTPase Der [Escherichia coli DEC11C]
gi|419307356|ref|ZP_13849255.1| GTPase Der [Escherichia coli DEC11D]
gi|419312366|ref|ZP_13854228.1| GTPase Der [Escherichia coli DEC11E]
gi|419317802|ref|ZP_13859604.1| GTPase Der [Escherichia coli DEC12A]
gi|419323951|ref|ZP_13865644.1| small GTP-binding domain protein [Escherichia coli DEC12B]
gi|419329940|ref|ZP_13871544.1| GTPase Der [Escherichia coli DEC12C]
gi|419335573|ref|ZP_13877098.1| small GTP-binding domain protein [Escherichia coli DEC12D]
gi|419340950|ref|ZP_13882414.1| small GTP-binding domain protein [Escherichia coli DEC12E]
gi|419370995|ref|ZP_13912114.1| GTPase Der [Escherichia coli DEC14A]
gi|419376443|ref|ZP_13917467.1| small GTP-binding domain protein [Escherichia coli DEC14B]
gi|419381780|ref|ZP_13922730.1| small GTP-binding domain protein [Escherichia coli DEC14C]
gi|419387124|ref|ZP_13928002.1| small GTP-binding domain protein [Escherichia coli DEC14D]
gi|419392629|ref|ZP_13933436.1| small GTP-binding domain protein [Escherichia coli DEC15A]
gi|419397614|ref|ZP_13938382.1| small GTP-binding domain protein [Escherichia coli DEC15B]
gi|419402956|ref|ZP_13943680.1| small GTP-binding domain protein [Escherichia coli DEC15C]
gi|419408075|ref|ZP_13948764.1| small GTP-binding domain protein [Escherichia coli DEC15D]
gi|419413664|ref|ZP_13954316.1| small GTP-binding domain protein [Escherichia coli DEC15E]
gi|419810220|ref|ZP_14335102.1| GTP-binding protein Der [Escherichia coli O32:H37 str. P4]
gi|419865997|ref|ZP_14388368.1| GTP-binding protein Der [Escherichia coli O103:H25 str. CVM9340]
gi|419868346|ref|ZP_14390627.1| GTP-binding protein Der [Escherichia coli O103:H2 str. CVM9450]
gi|419878639|ref|ZP_14400103.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9534]
gi|419885689|ref|ZP_14406377.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9545]
gi|419887602|ref|ZP_14408176.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9570]
gi|419894063|ref|ZP_14414003.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9574]
gi|419899544|ref|ZP_14419047.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM9942]
gi|419906605|ref|ZP_14425495.1| ribosome-associated GTPase EngA [Escherichia coli O26:H11 str.
CVM10026]
gi|419931187|ref|ZP_14448775.1| GTP-binding protein EngA [Escherichia coli 541-1]
gi|419939148|ref|ZP_14455949.1| GTP-binding protein EngA [Escherichia coli 75]
gi|419950853|ref|ZP_14467058.1| GTP-binding protein EngA [Escherichia coli CUMT8]
gi|420087417|ref|ZP_14599387.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9602]
gi|420097596|ref|ZP_14608891.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9634]
gi|420105083|ref|ZP_14615664.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9455]
gi|420111504|ref|ZP_14621335.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9553]
gi|420112679|ref|ZP_14622466.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM10021]
gi|420119928|ref|ZP_14629171.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM10030]
gi|420124629|ref|ZP_14633476.1| GTP-binding protein EngA [Escherichia coli O26:H11 str. CVM10224]
gi|420134520|ref|ZP_14642625.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM9952]
gi|420270738|ref|ZP_14773096.1| ribosome-associated GTPase EngA [Escherichia coli PA22]
gi|420276513|ref|ZP_14778797.1| ribosome-associated GTPase EngA [Escherichia coli PA40]
gi|420281704|ref|ZP_14783940.1| ribosome-associated GTPase EngA [Escherichia coli TW06591]
gi|420287788|ref|ZP_14789974.1| ribosome-associated GTPase EngA [Escherichia coli TW10246]
gi|420293541|ref|ZP_14795657.1| ribosome-associated GTPase EngA [Escherichia coli TW11039]
gi|420299383|ref|ZP_14801432.1| ribosome-associated GTPase EngA [Escherichia coli TW09109]
gi|420305395|ref|ZP_14807389.1| ribosome-associated GTPase EngA [Escherichia coli TW10119]
gi|420310816|ref|ZP_14812749.1| ribosome-associated GTPase EngA [Escherichia coli EC1738]
gi|420316126|ref|ZP_14818001.1| ribosome-associated GTPase EngA [Escherichia coli EC1734]
gi|420331948|ref|ZP_14833605.1| GTPase Der [Shigella flexneri K-1770]
gi|420386564|ref|ZP_14885913.1| GTPase Der [Escherichia coli EPECa12]
gi|420392257|ref|ZP_14891508.1| small GTP-binding domain protein [Escherichia coli EPEC C342-62]
gi|421774679|ref|ZP_16211291.1| ribosome-associated GTPase EngA [Escherichia coli AD30]
gi|421813498|ref|ZP_16249216.1| ribosome-associated GTPase EngA [Escherichia coli 8.0416]
gi|421819313|ref|ZP_16254809.1| ribosome-associated GTPase EngA [Escherichia coli 10.0821]
gi|421825307|ref|ZP_16260665.1| ribosome-associated GTPase EngA [Escherichia coli FRIK920]
gi|421832040|ref|ZP_16267327.1| ribosome-associated GTPase EngA [Escherichia coli PA7]
gi|422761957|ref|ZP_16815714.1| ribosome GTPase EngA [Escherichia coli E1167]
gi|422767160|ref|ZP_16820887.1| ribosome-associated GTPase EngA [Escherichia coli E1520]
gi|422771585|ref|ZP_16825274.1| ribosome GTPase EngA [Escherichia coli E482]
gi|422777770|ref|ZP_16831422.1| ribosome-associated GTPase EngA [Escherichia coli H120]
gi|422792453|ref|ZP_16845153.1| ribosome GTPase EngA [Escherichia coli TA007]
gi|422819337|ref|ZP_16867548.1| GTPase Der [Escherichia coli M919]
gi|422835603|ref|ZP_16883657.1| GTP-binding protein engA [Escherichia coli E101]
gi|422956110|ref|ZP_16968584.1| GTPase Der [Escherichia coli H494]
gi|422988637|ref|ZP_16979410.1| GTPase Der [Escherichia coli O104:H4 str. C227-11]
gi|422995529|ref|ZP_16986293.1| GTPase Der [Escherichia coli O104:H4 str. C236-11]
gi|423000674|ref|ZP_16991428.1| GTPase Der [Escherichia coli O104:H4 str. 09-7901]
gi|423004346|ref|ZP_16995092.1| GTPase Der [Escherichia coli O104:H4 str. 04-8351]
gi|423010846|ref|ZP_17001580.1| GTPase Der [Escherichia coli O104:H4 str. 11-3677]
gi|423020074|ref|ZP_17010783.1| GTPase Der [Escherichia coli O104:H4 str. 11-4404]
gi|423025240|ref|ZP_17015937.1| GTPase Der [Escherichia coli O104:H4 str. 11-4522]
gi|423031060|ref|ZP_17021748.1| GTPase Der [Escherichia coli O104:H4 str. 11-4623]
gi|423038886|ref|ZP_17029560.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423044006|ref|ZP_17034673.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045734|ref|ZP_17036394.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423054273|ref|ZP_17043080.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423061248|ref|ZP_17050044.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423704110|ref|ZP_17678535.1| GTPase Der [Escherichia coli H730]
gi|423706631|ref|ZP_17681014.1| GTPase Der [Escherichia coli B799]
gi|423726222|ref|ZP_17700283.1| ribosome-associated GTPase EngA [Escherichia coli PA31]
gi|424078599|ref|ZP_17815590.1| ribosome-associated GTPase EngA [Escherichia coli FDA505]
gi|424085064|ref|ZP_17821567.1| ribosome-associated GTPase EngA [Escherichia coli FDA517]
gi|424091473|ref|ZP_17827418.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1996]
gi|424098095|ref|ZP_17833417.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1985]
gi|424104328|ref|ZP_17839109.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1990]
gi|424111000|ref|ZP_17845244.1| ribosome-associated GTPase EngA [Escherichia coli 93-001]
gi|424116939|ref|ZP_17850787.1| ribosome-associated GTPase EngA [Escherichia coli PA3]
gi|424123121|ref|ZP_17856452.1| ribosome-associated GTPase EngA [Escherichia coli PA5]
gi|424135559|ref|ZP_17868031.1| ribosome-associated GTPase EngA [Escherichia coli PA10]
gi|424148554|ref|ZP_17879938.1| ribosome-associated GTPase EngA [Escherichia coli PA15]
gi|424154371|ref|ZP_17885335.1| ribosome-associated GTPase EngA [Escherichia coli PA24]
gi|424250483|ref|ZP_17890898.1| ribosome-associated GTPase EngA [Escherichia coli PA25]
gi|424328678|ref|ZP_17896810.1| ribosome-associated GTPase EngA [Escherichia coli PA28]
gi|424450805|ref|ZP_17902520.1| ribosome-associated GTPase EngA [Escherichia coli PA32]
gi|424457005|ref|ZP_17908151.1| ribosome-associated GTPase EngA [Escherichia coli PA33]
gi|424463442|ref|ZP_17913890.1| ribosome-associated GTPase EngA [Escherichia coli PA39]
gi|424469782|ref|ZP_17919615.1| ribosome-associated GTPase EngA [Escherichia coli PA41]
gi|424476307|ref|ZP_17925632.1| ribosome-associated GTPase EngA [Escherichia coli PA42]
gi|424482060|ref|ZP_17931050.1| ribosome-associated GTPase EngA [Escherichia coli TW07945]
gi|424488220|ref|ZP_17936797.1| ribosome-associated GTPase EngA [Escherichia coli TW09098]
gi|424494784|ref|ZP_17942519.1| ribosome-associated GTPase EngA [Escherichia coli TW09195]
gi|424501590|ref|ZP_17948496.1| ribosome-associated GTPase EngA [Escherichia coli EC4203]
gi|424507837|ref|ZP_17954242.1| ribosome-associated GTPase EngA [Escherichia coli EC4196]
gi|424515158|ref|ZP_17959852.1| ribosome-associated GTPase EngA [Escherichia coli TW14313]
gi|424521378|ref|ZP_17965515.1| ribosome-associated GTPase EngA [Escherichia coli TW14301]
gi|424527271|ref|ZP_17970996.1| ribosome-associated GTPase EngA [Escherichia coli EC4421]
gi|424533419|ref|ZP_17976778.1| ribosome-associated GTPase EngA [Escherichia coli EC4422]
gi|424539519|ref|ZP_17982471.1| ribosome-associated GTPase EngA [Escherichia coli EC4013]
gi|424545570|ref|ZP_17987985.1| ribosome-associated GTPase EngA [Escherichia coli EC4402]
gi|424551810|ref|ZP_17993678.1| ribosome-associated GTPase EngA [Escherichia coli EC4439]
gi|424557996|ref|ZP_17999422.1| ribosome-associated GTPase EngA [Escherichia coli EC4436]
gi|424564342|ref|ZP_18005352.1| ribosome-associated GTPase EngA [Escherichia coli EC4437]
gi|424570475|ref|ZP_18011038.1| ribosome-associated GTPase EngA [Escherichia coli EC4448]
gi|424582461|ref|ZP_18022115.1| ribosome-associated GTPase EngA [Escherichia coli EC1863]
gi|424754449|ref|ZP_18182363.1| GTP-binding protein EngA [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424764622|ref|ZP_18192041.1| GTP-binding protein EngA [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424772063|ref|ZP_18199178.1| GTP-binding protein EngA [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425099168|ref|ZP_18501907.1| ribosome-associated GTPase EngA [Escherichia coli 3.4870]
gi|425105227|ref|ZP_18507553.1| ribosome-associated GTPase EngA [Escherichia coli 5.2239]
gi|425111242|ref|ZP_18513169.1| ribosome-associated GTPase EngA [Escherichia coli 6.0172]
gi|425115988|ref|ZP_18517787.1| ribosome-associated GTPase EngA [Escherichia coli 8.0566]
gi|425120753|ref|ZP_18522449.1| ribosome-associated GTPase EngA [Escherichia coli 8.0569]
gi|425127167|ref|ZP_18528344.1| ribosome-associated GTPase EngA [Escherichia coli 8.0586]
gi|425132900|ref|ZP_18533757.1| ribosome-associated GTPase EngA [Escherichia coli 8.2524]
gi|425139407|ref|ZP_18539796.1| ribosome-associated GTPase EngA [Escherichia coli 10.0833]
gi|425151310|ref|ZP_18550931.1| ribosome-associated GTPase EngA [Escherichia coli 88.0221]
gi|425163532|ref|ZP_18562427.1| ribosome-associated GTPase EngA [Escherichia coli FDA506]
gi|425169272|ref|ZP_18567756.1| ribosome-associated GTPase EngA [Escherichia coli FDA507]
gi|425175337|ref|ZP_18573466.1| ribosome-associated GTPase EngA [Escherichia coli FDA504]
gi|425181364|ref|ZP_18579070.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1999]
gi|425194406|ref|ZP_18591185.1| ribosome-associated GTPase EngA [Escherichia coli NE1487]
gi|425200882|ref|ZP_18597100.1| ribosome-associated GTPase EngA [Escherichia coli NE037]
gi|425207264|ref|ZP_18603073.1| ribosome-associated GTPase EngA [Escherichia coli FRIK2001]
gi|425213023|ref|ZP_18608433.1| ribosome-associated GTPase EngA [Escherichia coli PA4]
gi|425219143|ref|ZP_18614120.1| ribosome-associated GTPase EngA [Escherichia coli PA23]
gi|425225693|ref|ZP_18620170.1| ribosome-associated GTPase EngA [Escherichia coli PA49]
gi|425231957|ref|ZP_18626006.1| ribosome-associated GTPase EngA [Escherichia coli PA45]
gi|425237876|ref|ZP_18631605.1| ribosome-associated GTPase EngA [Escherichia coli TT12B]
gi|425244091|ref|ZP_18637409.1| ribosome-associated GTPase EngA [Escherichia coli MA6]
gi|425250255|ref|ZP_18643201.1| ribosome-associated GTPase EngA [Escherichia coli 5905]
gi|425256084|ref|ZP_18648612.1| ribosome-associated GTPase EngA [Escherichia coli CB7326]
gi|425262344|ref|ZP_18654361.1| ribosome-associated GTPase EngA [Escherichia coli EC96038]
gi|425268341|ref|ZP_18659979.1| ribosome-associated GTPase EngA [Escherichia coli 5412]
gi|425273661|ref|ZP_18665072.1| ribosome-associated GTPase EngA [Escherichia coli TW15901]
gi|425284206|ref|ZP_18675244.1| ribosome-associated GTPase EngA [Escherichia coli TW00353]
gi|425295775|ref|ZP_18685986.1| ribosome-associated GTPase EngA [Escherichia coli PA38]
gi|425312481|ref|ZP_18701674.1| ribosome-associated GTPase EngA [Escherichia coli EC1735]
gi|425318475|ref|ZP_18707273.1| ribosome-associated GTPase EngA [Escherichia coli EC1736]
gi|425324543|ref|ZP_18712921.1| ribosome-associated GTPase EngA [Escherichia coli EC1737]
gi|425330908|ref|ZP_18718773.1| ribosome-associated GTPase EngA [Escherichia coli EC1846]
gi|425337084|ref|ZP_18724466.1| ribosome-associated GTPase EngA [Escherichia coli EC1847]
gi|425343426|ref|ZP_18730325.1| ribosome-associated GTPase EngA [Escherichia coli EC1848]
gi|425349235|ref|ZP_18735712.1| ribosome-associated GTPase EngA [Escherichia coli EC1849]
gi|425355529|ref|ZP_18741604.1| ribosome-associated GTPase EngA [Escherichia coli EC1850]
gi|425361492|ref|ZP_18747149.1| ribosome-associated GTPase EngA [Escherichia coli EC1856]
gi|425367674|ref|ZP_18752844.1| ribosome-associated GTPase EngA [Escherichia coli EC1862]
gi|425374024|ref|ZP_18758674.1| ribosome-associated GTPase EngA [Escherichia coli EC1864]
gi|425380687|ref|ZP_18764704.1| ribosome-associated GTPase EngA [Escherichia coli EC1865]
gi|425386913|ref|ZP_18770479.1| ribosome-associated GTPase EngA [Escherichia coli EC1866]
gi|425393600|ref|ZP_18776715.1| ribosome-associated GTPase EngA [Escherichia coli EC1868]
gi|425399699|ref|ZP_18782413.1| ribosome-associated GTPase EngA [Escherichia coli EC1869]
gi|425405788|ref|ZP_18788019.1| ribosome-associated GTPase EngA [Escherichia coli EC1870]
gi|425412178|ref|ZP_18793949.1| ribosome-associated GTPase EngA [Escherichia coli NE098]
gi|425418499|ref|ZP_18799778.1| ribosome-associated GTPase EngA [Escherichia coli FRIK523]
gi|425423355|ref|ZP_18804523.1| ribosome-associated GTPase EngA [Escherichia coli 0.1288]
gi|425429760|ref|ZP_18810380.1| ribosome-associated GTPase EngA [Escherichia coli 0.1304]
gi|428954276|ref|ZP_19026085.1| ribosome-associated GTPase EngA [Escherichia coli 88.1042]
gi|428960241|ref|ZP_19031559.1| ribosome-associated GTPase EngA [Escherichia coli 89.0511]
gi|428966865|ref|ZP_19037594.1| ribosome-associated GTPase EngA [Escherichia coli 90.0091]
gi|428979063|ref|ZP_19048899.1| ribosome-associated GTPase EngA [Escherichia coli 90.2281]
gi|428984875|ref|ZP_19054281.1| ribosome-associated GTPase EngA [Escherichia coli 93.0055]
gi|428990989|ref|ZP_19059990.1| ribosome-associated GTPase EngA [Escherichia coli 93.0056]
gi|428996855|ref|ZP_19065464.1| ribosome-associated GTPase EngA [Escherichia coli 94.0618]
gi|429003101|ref|ZP_19071238.1| ribosome-associated GTPase EngA [Escherichia coli 95.0183]
gi|429009186|ref|ZP_19076713.1| ribosome-associated GTPase EngA [Escherichia coli 95.1288]
gi|429015715|ref|ZP_19082620.1| ribosome-associated GTPase EngA [Escherichia coli 95.0943]
gi|429021544|ref|ZP_19088079.1| ribosome-associated GTPase EngA [Escherichia coli 96.0428]
gi|429027648|ref|ZP_19093663.1| ribosome-associated GTPase EngA [Escherichia coli 96.0427]
gi|429033836|ref|ZP_19099372.1| ribosome-associated GTPase EngA [Escherichia coli 96.0939]
gi|429039894|ref|ZP_19105015.1| ribosome-associated GTPase EngA [Escherichia coli 96.0932]
gi|429045701|ref|ZP_19110427.1| ribosome-associated GTPase EngA [Escherichia coli 96.0107]
gi|429051224|ref|ZP_19115795.1| ribosome-associated GTPase EngA [Escherichia coli 97.0003]
gi|429056598|ref|ZP_19120924.1| ribosome-associated GTPase EngA [Escherichia coli 97.1742]
gi|429062095|ref|ZP_19126122.1| ribosome-associated GTPase EngA [Escherichia coli 97.0007]
gi|429068370|ref|ZP_19131848.1| ribosome-associated GTPase EngA [Escherichia coli 99.0672]
gi|429074318|ref|ZP_19137574.1| ribosome-associated GTPase EngA [Escherichia coli 99.0678]
gi|429079512|ref|ZP_19142652.1| ribosome-associated GTPase EngA [Escherichia coli 99.0713]
gi|429720101|ref|ZP_19255030.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772002|ref|ZP_19304023.1| GTPase Der [Escherichia coli O104:H4 str. 11-02030]
gi|429776947|ref|ZP_19308923.1| GTPase Der [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785674|ref|ZP_19317570.1| GTPase Der [Escherichia coli O104:H4 str. 11-02092]
gi|429791564|ref|ZP_19323419.1| GTPase Der [Escherichia coli O104:H4 str. 11-02093]
gi|429792412|ref|ZP_19324262.1| GTPase Der [Escherichia coli O104:H4 str. 11-02281]
gi|429798988|ref|ZP_19330787.1| GTPase Der [Escherichia coli O104:H4 str. 11-02318]
gi|429807501|ref|ZP_19339226.1| GTPase Der [Escherichia coli O104:H4 str. 11-02913]
gi|429812401|ref|ZP_19344085.1| GTPase Der [Escherichia coli O104:H4 str. 11-03439]
gi|429817922|ref|ZP_19349561.1| GTPase Der [Escherichia coli O104:H4 str. 11-04080]
gi|429823134|ref|ZP_19354729.1| GTPase Der [Escherichia coli O104:H4 str. 11-03943]
gi|429827528|ref|ZP_19358582.1| ribosome-associated GTPase EngA [Escherichia coli 96.0109]
gi|429833889|ref|ZP_19364251.1| ribosome-associated GTPase EngA [Escherichia coli 97.0010]
gi|429904509|ref|ZP_19370488.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908647|ref|ZP_19374611.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914518|ref|ZP_19380466.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919548|ref|ZP_19385480.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925368|ref|ZP_19391282.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929305|ref|ZP_19395207.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935844|ref|ZP_19401730.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941524|ref|ZP_19407398.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-5603]
gi|429944204|ref|ZP_19410067.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951763|ref|ZP_19417609.1| GTPase Der [Escherichia coli O104:H4 str. Ec12-0465]
gi|429955112|ref|ZP_19420944.1| GTPase Der [Escherichia coli O104:H4 str. Ec12-0466]
gi|432370734|ref|ZP_19613819.1| GTPase Der [Escherichia coli KTE10]
gi|432377721|ref|ZP_19620710.1| GTPase Der [Escherichia coli KTE12]
gi|432417992|ref|ZP_19660590.1| GTPase Der [Escherichia coli KTE44]
gi|432450643|ref|ZP_19692905.1| GTPase Der [Escherichia coli KTE193]
gi|432481861|ref|ZP_19723816.1| GTPase Der [Escherichia coli KTE210]
gi|432544096|ref|ZP_19780938.1| GTPase Der [Escherichia coli KTE236]
gi|432549587|ref|ZP_19786353.1| GTPase Der [Escherichia coli KTE237]
gi|432564801|ref|ZP_19801381.1| GTPase Der [Escherichia coli KTE51]
gi|432576774|ref|ZP_19813231.1| GTPase Der [Escherichia coli KTE56]
gi|432622742|ref|ZP_19858770.1| GTPase Der [Escherichia coli KTE76]
gi|432628135|ref|ZP_19864111.1| GTPase Der [Escherichia coli KTE77]
gi|432637753|ref|ZP_19873622.1| GTPase Der [Escherichia coli KTE81]
gi|432661722|ref|ZP_19897362.1| GTPase Der [Escherichia coli KTE111]
gi|432671616|ref|ZP_19907144.1| GTPase Der [Escherichia coli KTE119]
gi|432675635|ref|ZP_19911091.1| GTPase Der [Escherichia coli KTE142]
gi|432686337|ref|ZP_19921632.1| GTPase Der [Escherichia coli KTE156]
gi|432692459|ref|ZP_19927686.1| GTPase Der [Escherichia coli KTE161]
gi|432705289|ref|ZP_19940388.1| GTPase Der [Escherichia coli KTE171]
gi|432738002|ref|ZP_19972759.1| GTPase Der [Escherichia coli KTE42]
gi|432765869|ref|ZP_20000307.1| GTPase Der [Escherichia coli KTE48]
gi|432806691|ref|ZP_20040619.1| GTPase Der [Escherichia coli KTE91]
gi|432810180|ref|ZP_20044073.1| GTPase Der [Escherichia coli KTE101]
gi|432816238|ref|ZP_20050021.1| GTPase Der [Escherichia coli KTE115]
gi|432832568|ref|ZP_20066140.1| GTPase Der [Escherichia coli KTE135]
gi|432835465|ref|ZP_20069003.1| GTPase Der [Escherichia coli KTE136]
gi|432869847|ref|ZP_20090440.1| GTPase Der [Escherichia coli KTE147]
gi|432876256|ref|ZP_20094296.1| GTPase Der [Escherichia coli KTE154]
gi|432935408|ref|ZP_20134762.1| GTPase Der [Escherichia coli KTE184]
gi|432948358|ref|ZP_20143514.1| GTPase Der [Escherichia coli KTE196]
gi|432956065|ref|ZP_20147884.1| GTPase Der [Escherichia coli KTE197]
gi|432968590|ref|ZP_20157504.1| GTPase Der [Escherichia coli KTE203]
gi|433034337|ref|ZP_20222046.1| GTPase Der [Escherichia coli KTE112]
gi|433044063|ref|ZP_20231557.1| GTPase Der [Escherichia coli KTE117]
gi|433048927|ref|ZP_20236274.1| GTPase Der [Escherichia coli KTE120]
gi|433092885|ref|ZP_20279149.1| GTPase Der [Escherichia coli KTE138]
gi|433131053|ref|ZP_20316488.1| GTPase Der [Escherichia coli KTE163]
gi|433135721|ref|ZP_20321062.1| GTPase Der [Escherichia coli KTE166]
gi|433194568|ref|ZP_20378554.1| GTPase Der [Escherichia coli KTE90]
gi|442592530|ref|ZP_21010505.1| GTP-binding protein EngA [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442599042|ref|ZP_21016777.1| GTP-binding protein EngA [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|443618566|ref|YP_007382422.1| GTP-binding protein Der [Escherichia coli APEC O78]
gi|444926063|ref|ZP_21245366.1| ribosome-associated GTPase EngA [Escherichia coli 09BKT078844]
gi|444931773|ref|ZP_21250818.1| ribosome-associated GTPase EngA [Escherichia coli 99.0814]
gi|444937223|ref|ZP_21256004.1| ribosome-associated GTPase EngA [Escherichia coli 99.0815]
gi|444942854|ref|ZP_21261376.1| ribosome-associated GTPase EngA [Escherichia coli 99.0816]
gi|444948232|ref|ZP_21266547.1| ribosome-associated GTPase EngA [Escherichia coli 99.0839]
gi|444959407|ref|ZP_21277264.1| ribosome-associated GTPase EngA [Escherichia coli 99.1753]
gi|444975826|ref|ZP_21292954.1| ribosome-associated GTPase EngA [Escherichia coli 99.1805]
gi|444981209|ref|ZP_21298125.1| ribosome-associated GTPase EngA [Escherichia coli ATCC 700728]
gi|444986604|ref|ZP_21303389.1| ribosome-associated GTPase EngA [Escherichia coli PA11]
gi|444991919|ref|ZP_21308566.1| ribosome-associated GTPase EngA [Escherichia coli PA19]
gi|444997225|ref|ZP_21313727.1| ribosome-associated GTPase EngA [Escherichia coli PA13]
gi|445002802|ref|ZP_21319195.1| ribosome-associated GTPase EngA [Escherichia coli PA2]
gi|445008240|ref|ZP_21324483.1| ribosome-associated GTPase EngA [Escherichia coli PA47]
gi|445013335|ref|ZP_21329446.1| ribosome-associated GTPase EngA [Escherichia coli PA48]
gi|445019200|ref|ZP_21335169.1| ribosome-associated GTPase EngA [Escherichia coli PA8]
gi|445024656|ref|ZP_21340484.1| ribosome-associated GTPase EngA [Escherichia coli 7.1982]
gi|445029991|ref|ZP_21345670.1| ribosome-associated GTPase EngA [Escherichia coli 99.1781]
gi|445035459|ref|ZP_21350995.1| ribosome-associated GTPase EngA [Escherichia coli 99.1762]
gi|445041083|ref|ZP_21356460.1| ribosome-associated GTPase EngA [Escherichia coli PA35]
gi|445051825|ref|ZP_21366876.1| ribosome-associated GTPase EngA [Escherichia coli 95.0083]
gi|445057597|ref|ZP_21372459.1| ribosome-associated GTPase EngA [Escherichia coli 99.0670]
gi|450219663|ref|ZP_21896205.1| GTP-binding protein EngA [Escherichia coli O08]
gi|450246564|ref|ZP_21901001.1| GTP-binding protein EngA [Escherichia coli S17]
gi|452971711|ref|ZP_21969938.1| GTP-binding protein Der [Escherichia coli O157:H7 str. EC4009]
gi|68566316|sp|P0A6P5.1|DER_ECOLI RecName: Full=GTPase Der; AltName: Full=Double era-like domain
protein; AltName: Full=GTP-binding protein EngA
gi|68566317|sp|P0A6P6.1|DER_ECO57 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166920098|sp|A7ZPV4.1|DER_ECO24 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166920099|sp|A8A317.1|DER_ECOHS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037147|sp|B1IWF0.1|DER_ECOLC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226741138|sp|B7M7L5.1|DER_ECO8A RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|229784133|sp|B1XAY6.1|DER_ECODH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238058973|sp|B5Z0Y0.1|DER_ECO5E RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238058974|sp|B6I583.1|DER_ECOSE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783153|sp|B7LCQ1.1|DER_ECO55 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|259645873|sp|C4ZX86.1|DER_ECOBW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|85675433|dbj|BAA16397.2| predicted GTP-binding protein [Escherichia coli str. K12 substr.
W3110]
gi|87082120|gb|AAC75564.2| GTPase; multicopy suppressor of ftsJ [Escherichia coli str. K-12
substr. MG1655]
gi|157067666|gb|ABV06921.1| GTP-binding protein EngA [Escherichia coli HS]
gi|157078758|gb|ABV18466.1| GTP-binding protein EngA [Escherichia coli E24377A]
gi|169754134|gb|ACA76833.1| small GTP-binding protein [Escherichia coli ATCC 8739]
gi|169889956|gb|ACB03663.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr.
DH10B]
gi|187770576|gb|EDU34420.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4196]
gi|188017037|gb|EDU55159.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4113]
gi|188489820|gb|EDU64923.1| GTP-binding protein EngA [Escherichia coli 53638]
gi|189003270|gb|EDU72256.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4076]
gi|189356591|gb|EDU75010.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4401]
gi|189362188|gb|EDU80607.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4486]
gi|189368460|gb|EDU86876.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4501]
gi|189372347|gb|EDU90763.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC869]
gi|189378586|gb|EDU97002.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC508]
gi|190902271|gb|EDV62011.1| ribosome-associated GTPase EngA [Escherichia coli B7A]
gi|192929261|gb|EDV82870.1| ribosome-associated GTPase EngA [Escherichia coli E22]
gi|194414623|gb|EDX30895.1| ribosome-associated GTPase EngA [Escherichia coli B171]
gi|194423378|gb|EDX39369.1| ribosome-associated GTPase EngA [Escherichia coli 101-1]
gi|208735615|gb|EDZ84302.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4045]
gi|208741557|gb|EDZ89239.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4042]
gi|209161078|gb|ACI38511.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
EC4115]
gi|209913247|dbj|BAG78321.1| putative GTP-binding protein [Escherichia coli SE11]
gi|217319280|gb|EEC27705.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str.
TW14588]
gi|218352870|emb|CAU98669.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
coli 55989]
gi|218361804|emb|CAQ99403.1| GTPase involved in ribosome synthesis and maintenance [Escherichia
coli IAI1]
gi|238862452|gb|ACR64450.1| predicted GTP-binding protein [Escherichia coli BW2952]
gi|242378109|emb|CAQ32882.1| 50S ribosomal subunit stability factor [Escherichia coli BL21(DE3)]
gi|253323639|gb|ACT28241.1| small GTP-binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974386|gb|ACT40057.1| GTP-binding protein EngA [Escherichia coli B str. REL606]
gi|253978553|gb|ACT44223.1| GTP-binding protein EngA [Escherichia coli BL21(DE3)]
gi|254593857|gb|ACT73218.1| 50S ribosome associated factor involved in the biogenesis and
stability of 50S ribosomal subunits [Escherichia coli
O157:H7 str. TW14359]
gi|257755254|dbj|BAI26756.1| predicted GTP-binding protein Der [Escherichia coli O26:H11 str.
11368]
gi|257760288|dbj|BAI31785.1| predicted GTP-binding protein Der [Escherichia coli O103:H2 str.
12009]
gi|257765556|dbj|BAI37051.1| predicted GTP-binding protein Der [Escherichia coli O111:H- str.
11128]
gi|260448409|gb|ACX38831.1| small GTP-binding protein [Escherichia coli DH1]
gi|290763605|gb|ADD57566.1| GTP-binding protein engA [Escherichia coli O55:H7 str. CB9615]
gi|291323694|gb|EFE63122.1| ribosome-associated GTPase EngA [Escherichia coli B088]
gi|291433424|gb|EFF06403.1| ribosome-associated GTPase EngA [Escherichia coli B185]
gi|299881282|gb|EFI89493.1| ribosome-associated GTPase EngA [Escherichia coli MS 196-1]
gi|306907417|gb|EFN37921.1| ribosome-associated GTPase EngA [Escherichia coli W]
gi|309702843|emb|CBJ02174.1| GTP-binding protein [Escherichia coli ETEC H10407]
gi|310331843|gb|EFP99078.1| small GTP-binding domain protein [Escherichia coli 1827-70]
gi|315061830|gb|ADT76157.1| predicted GTP-binding protein [Escherichia coli W]
gi|315137135|dbj|BAJ44294.1| GTP-binding protein engA [Escherichia coli DH1]
gi|315615770|gb|EFU96402.1| small GTP-binding domain protein [Escherichia coli 3431]
gi|320180501|gb|EFW55432.1| GTP-binding protein EngA [Shigella boydii ATCC 9905]
gi|320188844|gb|EFW63503.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC1212]
gi|320200075|gb|EFW74664.1| GTP-binding protein EngA [Escherichia coli EC4100B]
gi|320640855|gb|EFX10343.1| GTP-binding protein Der [Escherichia coli O157:H7 str. G5101]
gi|320646298|gb|EFX15225.1| GTP-binding protein Der [Escherichia coli O157:H- str. 493-89]
gi|320651803|gb|EFX20183.1| GTP-binding protein Der [Escherichia coli O157:H- str. H 2687]
gi|320657189|gb|EFX24998.1| GTP-binding protein Der [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320662795|gb|EFX30127.1| GTP-binding protein Der [Escherichia coli O55:H7 str. USDA 5905]
gi|320667599|gb|EFX34514.1| GTP-binding protein Der [Escherichia coli O157:H7 str. LSU-61]
gi|323156165|gb|EFZ42324.1| small GTP-binding domain protein [Escherichia coli EPECa14]
gi|323159381|gb|EFZ45366.1| small GTP-binding domain protein [Escherichia coli E128010]
gi|323170218|gb|EFZ55871.1| small GTP-binding domain protein [Escherichia coli LT-68]
gi|323177365|gb|EFZ62953.1| small GTP-binding domain protein [Escherichia coli OK1180]
gi|323184428|gb|EFZ69803.1| small GTP-binding domain protein [Escherichia coli OK1357]
gi|323377589|gb|ADX49857.1| ribosome-associated GTPase EngA [Escherichia coli KO11FL]
gi|323936404|gb|EGB32694.1| ribosome-associated GTPase EngA [Escherichia coli E1520]
gi|323941227|gb|EGB37412.1| ribosome GTPase EngA [Escherichia coli E482]
gi|323944733|gb|EGB40800.1| ribosome-associated GTPase EngA [Escherichia coli H120]
gi|323971076|gb|EGB66324.1| ribosome GTPase EngA [Escherichia coli TA007]
gi|324118145|gb|EGC12042.1| ribosome GTPase EngA [Escherichia coli E1167]
gi|326340309|gb|EGD64113.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1125]
gi|326344993|gb|EGD68737.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1044]
gi|331064451|gb|EGI36362.1| ribosome-associated GTPase EngA [Escherichia coli TA271]
gi|332344383|gb|AEE57717.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|333000699|gb|EGK20275.1| small GTP-binding domain protein [Shigella flexneri VA-6]
gi|338769624|gb|EGP24403.1| GTPase Der [Escherichia coli PCN033]
gi|339416058|gb|AEJ57730.1| small GTP-binding domain protein [Escherichia coli UMNF18]
gi|340733449|gb|EGR62580.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 01-09591]
gi|340739357|gb|EGR73592.1| GTP-binding protein Der [Escherichia coli O104:H4 str. LB226692]
gi|341916439|gb|EGT66056.1| engA [Escherichia coli O104:H4 str. C227-11]
gi|342364547|gb|EGU28647.1| GTP-binding protein Der [Escherichia coli XH140A]
gi|344194577|gb|EGV48650.1| GTP-binding protein Der [Escherichia coli XH001]
gi|345337021|gb|EGW69454.1| small GTP-binding domain protein [Escherichia coli 2534-86]
gi|345337785|gb|EGW70217.1| small GTP-binding domain protein [Escherichia coli STEC_B2F1]
gi|345352614|gb|EGW84860.1| small GTP-binding domain protein [Escherichia coli 3030-1]
gi|345358345|gb|EGW90533.1| small GTP-binding domain protein [Escherichia coli STEC_DG131-3]
gi|345362171|gb|EGW94328.1| small GTP-binding domain protein [Escherichia coli STEC_EH250]
gi|345372557|gb|EGX04521.1| small GTP-binding domain protein [Escherichia coli STEC_MHI813]
gi|345375809|gb|EGX07756.1| small GTP-binding domain protein [Escherichia coli G58-1]
gi|345387023|gb|EGX16852.1| small GTP-binding domain protein [Escherichia coli STEC_S1191]
gi|345393266|gb|EGX23044.1| small GTP-binding domain protein [Escherichia coli TX1999]
gi|354862364|gb|EHF22802.1| GTPase Der [Escherichia coli O104:H4 str. C236-11]
gi|354867648|gb|EHF28070.1| GTPase Der [Escherichia coli O104:H4 str. C227-11]
gi|354868749|gb|EHF29162.1| GTPase Der [Escherichia coli O104:H4 str. 04-8351]
gi|354873645|gb|EHF34022.1| GTPase Der [Escherichia coli O104:H4 str. 09-7901]
gi|354880329|gb|EHF40665.1| GTPase Der [Escherichia coli O104:H4 str. 11-3677]
gi|354889118|gb|EHF49371.1| GTPase Der [Escherichia coli O104:H4 str. 11-4404]
gi|354893348|gb|EHF53552.1| GTPase Der [Escherichia coli O104:H4 str. 11-4522]
gi|354894299|gb|EHF54495.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354897091|gb|EHF57252.1| GTPase Der [Escherichia coli O104:H4 str. 11-4623]
gi|354898455|gb|EHF58609.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354912223|gb|EHF72224.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354915179|gb|EHF75159.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354917413|gb|EHF77379.1| GTPase Der [Escherichia coli O104:H4 str. 11-4632 C4]
gi|359332820|dbj|BAL39267.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr.
MDS42]
gi|371600408|gb|EHN89182.1| GTPase Der [Escherichia coli H494]
gi|371612215|gb|EHO00731.1| GTP-binding protein engA [Escherichia coli E101]
gi|375322865|gb|EHS68598.1| GTP-binding protein Der [Escherichia coli O157:H43 str. T22]
gi|377892851|gb|EHU57291.1| small GTP-binding domain protein [Escherichia coli DEC3B]
gi|377893069|gb|EHU57508.1| small GTP-binding domain protein [Escherichia coli DEC3A]
gi|377904844|gb|EHU69122.1| small GTP-binding domain protein [Escherichia coli DEC3C]
gi|377909364|gb|EHU73566.1| small GTP-binding domain protein [Escherichia coli DEC3D]
gi|377911596|gb|EHU75765.1| small GTP-binding domain protein [Escherichia coli DEC3E]
gi|377920987|gb|EHU85001.1| small GTP-binding domain protein [Escherichia coli DEC3F]
gi|377926333|gb|EHU90268.1| small GTP-binding domain protein [Escherichia coli DEC4A]
gi|377929813|gb|EHU93701.1| small GTP-binding domain protein [Escherichia coli DEC4B]
gi|377941375|gb|EHV05115.1| small GTP-binding domain protein [Escherichia coli DEC4D]
gi|377941756|gb|EHV05493.1| small GTP-binding domain protein [Escherichia coli DEC4C]
gi|377947558|gb|EHV11225.1| small GTP-binding domain protein [Escherichia coli DEC4E]
gi|377956791|gb|EHV20334.1| small GTP-binding domain protein [Escherichia coli DEC4F]
gi|377960003|gb|EHV23494.1| small GTP-binding domain protein [Escherichia coli DEC5A]
gi|377966689|gb|EHV30100.1| small GTP-binding domain protein [Escherichia coli DEC5B]
gi|377983978|gb|EHV47219.1| GTPase Der [Escherichia coli DEC5E]
gi|377992262|gb|EHV55409.1| small GTP-binding domain protein [Escherichia coli DEC6B]
gi|377993974|gb|EHV57105.1| GTPase Der [Escherichia coli DEC6A]
gi|377995843|gb|EHV58954.1| GTPase Der [Escherichia coli DEC6C]
gi|378007541|gb|EHV70510.1| GTPase Der [Escherichia coli DEC6D]
gi|378009766|gb|EHV72720.1| small GTP-binding domain protein [Escherichia coli DEC6E]
gi|378015224|gb|EHV78121.1| GTPase Der [Escherichia coli DEC7A]
gi|378023444|gb|EHV86121.1| small GTP-binding domain protein [Escherichia coli DEC7C]
gi|378029250|gb|EHV91866.1| small GTP-binding domain protein [Escherichia coli DEC7D]
gi|378032054|gb|EHV94636.1| small GTP-binding domain protein [Escherichia coli DEC7B]
gi|378037910|gb|EHW00432.1| GTPase Der [Escherichia coli DEC7E]
gi|378046568|gb|EHW08947.1| GTPase Der [Escherichia coli DEC8A]
gi|378047583|gb|EHW09945.1| small GTP-binding domain protein [Escherichia coli DEC8B]
gi|378053436|gb|EHW15736.1| small GTP-binding domain protein [Escherichia coli DEC8C]
gi|378060792|gb|EHW22980.1| small GTP-binding domain protein [Escherichia coli DEC8D]
gi|378065095|gb|EHW27245.1| small GTP-binding domain protein [Escherichia coli DEC8E]
gi|378073264|gb|EHW35317.1| small GTP-binding domain protein [Escherichia coli DEC9A]
gi|378076514|gb|EHW38518.1| small GTP-binding domain protein [Escherichia coli DEC9B]
gi|378083918|gb|EHW45849.1| small GTP-binding domain protein [Escherichia coli DEC9C]
gi|378090292|gb|EHW52132.1| small GTP-binding domain protein [Escherichia coli DEC9D]
gi|378094142|gb|EHW55944.1| small GTP-binding domain protein [Escherichia coli DEC9E]
gi|378099459|gb|EHW61165.1| small GTP-binding domain protein [Escherichia coli DEC10A]
gi|378104983|gb|EHW66631.1| small GTP-binding domain protein [Escherichia coli DEC10B]
gi|378110864|gb|EHW72458.1| small GTP-binding domain protein [Escherichia coli DEC10C]
gi|378116230|gb|EHW77763.1| small GTP-binding domain protein [Escherichia coli DEC10D]
gi|378127745|gb|EHW89133.1| small GTP-binding domain protein [Escherichia coli DEC10E]
gi|378130240|gb|EHW91610.1| small GTP-binding domain protein [Escherichia coli DEC11A]
gi|378130555|gb|EHW91919.1| small GTP-binding domain protein [Escherichia coli DEC10F]
gi|378140558|gb|EHX01781.1| small GTP-binding domain protein [Escherichia coli DEC11B]
gi|378148339|gb|EHX09479.1| GTPase Der [Escherichia coli DEC11D]
gi|378150844|gb|EHX11959.1| GTPase Der [Escherichia coli DEC11C]
gi|378157994|gb|EHX19025.1| GTPase Der [Escherichia coli DEC11E]
gi|378165027|gb|EHX25968.1| small GTP-binding domain protein [Escherichia coli DEC12B]
gi|378168495|gb|EHX29399.1| GTPase Der [Escherichia coli DEC12A]
gi|378170256|gb|EHX31142.1| GTPase Der [Escherichia coli DEC12C]
gi|378181005|gb|EHX41682.1| small GTP-binding domain protein [Escherichia coli DEC12D]
gi|378187861|gb|EHX48472.1| small GTP-binding domain protein [Escherichia coli DEC12E]
gi|378217589|gb|EHX77868.1| GTPase Der [Escherichia coli DEC14A]
gi|378219166|gb|EHX79435.1| small GTP-binding domain protein [Escherichia coli DEC14B]
gi|378227423|gb|EHX87595.1| small GTP-binding domain protein [Escherichia coli DEC14C]
gi|378231651|gb|EHX91762.1| small GTP-binding domain protein [Escherichia coli DEC14D]
gi|378236823|gb|EHX96862.1| small GTP-binding domain protein [Escherichia coli DEC15A]
gi|378243735|gb|EHY03681.1| small GTP-binding domain protein [Escherichia coli DEC15B]
gi|378247490|gb|EHY07409.1| small GTP-binding domain protein [Escherichia coli DEC15C]
gi|378254454|gb|EHY14318.1| small GTP-binding domain protein [Escherichia coli DEC15D]
gi|378259096|gb|EHY18912.1| small GTP-binding domain protein [Escherichia coli DEC15E]
gi|383103944|gb|AFG41453.1| GTP-binding protein engA [Escherichia coli P12b]
gi|383392070|gb|AFH17028.1| GTP-binding protein Der [Escherichia coli KO11FL]
gi|383406093|gb|AFH12336.1| GTP-binding protein Der [Escherichia coli W]
gi|385156942|gb|EIF18936.1| GTP-binding protein Der [Escherichia coli O32:H37 str. P4]
gi|385537116|gb|EIF83999.1| GTPase Der [Escherichia coli M919]
gi|385707226|gb|EIG44258.1| GTPase Der [Escherichia coli H730]
gi|385711596|gb|EIG48554.1| GTPase Der [Escherichia coli B799]
gi|386121717|gb|EIG70332.1| GTPase Der [Escherichia sp. 4_1_40B]
gi|386147439|gb|EIG93879.1| ribosome-associated GTPase EngA [Escherichia coli 97.0246]
gi|386152251|gb|EIH03540.1| ribosome-associated GTPase EngA [Escherichia coli 5.0588]
gi|386156133|gb|EIH12480.1| ribosome-associated GTPase EngA [Escherichia coli 97.0259]
gi|386163404|gb|EIH25199.1| ribosome-associated GTPase EngA [Escherichia coli 1.2264]
gi|386168048|gb|EIH34564.1| ribosome-associated GTPase EngA [Escherichia coli 96.0497]
gi|386172903|gb|EIH44917.1| ribosome-associated GTPase EngA [Escherichia coli 99.0741]
gi|386178778|gb|EIH56257.1| ribosome-associated GTPase EngA [Escherichia coli 3.2608]
gi|386183206|gb|EIH65957.1| ribosome-associated GTPase EngA [Escherichia coli 93.0624]
gi|386192723|gb|EIH81447.1| ribosome-associated GTPase EngA [Escherichia coli 4.0522]
gi|386197017|gb|EIH91225.1| ribosome-associated GTPase EngA [Escherichia coli JB1-95]
gi|386201003|gb|EIH99993.1| ribosome-associated GTPase EngA [Escherichia coli 96.154]
gi|386204347|gb|EII08858.1| ribosome-associated GTPase EngA [Escherichia coli 5.0959]
gi|386213463|gb|EII23888.1| ribosome-associated GTPase EngA [Escherichia coli 9.0111]
gi|386218644|gb|EII35127.1| ribosome-associated GTPase EngA [Escherichia coli 4.0967]
gi|386224617|gb|EII46952.1| ribosome-associated GTPase EngA [Escherichia coli 2.3916]
gi|386228099|gb|EII55455.1| ribosome-associated GTPase EngA [Escherichia coli 3.3884]
gi|386236640|gb|EII68616.1| ribosome-associated GTPase EngA [Escherichia coli 2.4168]
gi|386239131|gb|EII76065.1| ribosome-associated GTPase EngA [Escherichia coli 3.2303]
gi|386253082|gb|EIJ02772.1| ribosome-associated GTPase EngA [Escherichia coli B41]
gi|386256797|gb|EIJ12291.1| ribosome-associated GTPase EngA [Escherichia coli 900105 (10e)]
gi|386797163|gb|AFJ30197.1| GTP-binding protein EngA [Escherichia coli Xuzhou21]
gi|388334444|gb|EIL01035.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9534]
gi|388336178|gb|EIL02725.1| GTP-binding protein Der [Escherichia coli O103:H25 str. CVM9340]
gi|388344972|gb|EIL10768.1| GTP-binding protein Der [Escherichia coli O103:H2 str. CVM9450]
gi|388348465|gb|EIL14060.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9545]
gi|388362470|gb|EIL26477.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9570]
gi|388365269|gb|EIL29072.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9574]
gi|388378699|gb|EIL41413.1| ribosome-associated GTPase EngA [Escherichia coli O26:H11 str.
CVM10026]
gi|388379681|gb|EIL42328.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM9942]
gi|388398922|gb|EIL59733.1| GTP-binding protein EngA [Escherichia coli 541-1]
gi|388408639|gb|EIL68980.1| GTP-binding protein EngA [Escherichia coli 75]
gi|388415959|gb|EIL75866.1| GTP-binding protein EngA [Escherichia coli CUMT8]
gi|390641260|gb|EIN20692.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1996]
gi|390642790|gb|EIN22179.1| ribosome-associated GTPase EngA [Escherichia coli FDA517]
gi|390643578|gb|EIN22917.1| ribosome-associated GTPase EngA [Escherichia coli FDA505]
gi|390659988|gb|EIN37725.1| ribosome-associated GTPase EngA [Escherichia coli 93-001]
gi|390661291|gb|EIN38950.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1985]
gi|390663144|gb|EIN40669.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1990]
gi|390676905|gb|EIN52983.1| ribosome-associated GTPase EngA [Escherichia coli PA3]
gi|390680256|gb|EIN56111.1| ribosome-associated GTPase EngA [Escherichia coli PA5]
gi|390695820|gb|EIN70331.1| ribosome-associated GTPase EngA [Escherichia coli PA10]
gi|390700299|gb|EIN74610.1| ribosome-associated GTPase EngA [Escherichia coli PA15]
gi|390714250|gb|EIN87164.1| ribosome-associated GTPase EngA [Escherichia coli PA22]
gi|390722195|gb|EIN94884.1| ribosome-associated GTPase EngA [Escherichia coli PA25]
gi|390723587|gb|EIN96175.1| ribosome-associated GTPase EngA [Escherichia coli PA24]
gi|390726637|gb|EIN99075.1| ribosome-associated GTPase EngA [Escherichia coli PA28]
gi|390741714|gb|EIO12768.1| ribosome-associated GTPase EngA [Escherichia coli PA31]
gi|390742180|gb|EIO13196.1| ribosome-associated GTPase EngA [Escherichia coli PA32]
gi|390744867|gb|EIO15708.1| ribosome-associated GTPase EngA [Escherichia coli PA33]
gi|390757923|gb|EIO27393.1| ribosome-associated GTPase EngA [Escherichia coli PA40]
gi|390766952|gb|EIO36061.1| ribosome-associated GTPase EngA [Escherichia coli PA41]
gi|390768087|gb|EIO37135.1| ribosome-associated GTPase EngA [Escherichia coli PA39]
gi|390768587|gb|EIO37618.1| ribosome-associated GTPase EngA [Escherichia coli PA42]
gi|390781041|gb|EIO48730.1| ribosome-associated GTPase EngA [Escherichia coli TW06591]
gi|390789527|gb|EIO56976.1| ribosome-associated GTPase EngA [Escherichia coli TW10246]
gi|390789906|gb|EIO57335.1| ribosome-associated GTPase EngA [Escherichia coli TW07945]
gi|390795864|gb|EIO63141.1| ribosome-associated GTPase EngA [Escherichia coli TW11039]
gi|390805353|gb|EIO72300.1| ribosome-associated GTPase EngA [Escherichia coli TW09098]
gi|390807078|gb|EIO73980.1| ribosome-associated GTPase EngA [Escherichia coli TW09109]
gi|390815700|gb|EIO82228.1| ribosome-associated GTPase EngA [Escherichia coli TW10119]
gi|390825566|gb|EIO91485.1| ribosome-associated GTPase EngA [Escherichia coli EC4203]
gi|390830037|gb|EIO95614.1| ribosome-associated GTPase EngA [Escherichia coli TW09195]
gi|390830268|gb|EIO95815.1| ribosome-associated GTPase EngA [Escherichia coli EC4196]
gi|390845669|gb|EIP09297.1| ribosome-associated GTPase EngA [Escherichia coli TW14301]
gi|390845928|gb|EIP09548.1| ribosome-associated GTPase EngA [Escherichia coli TW14313]
gi|390850219|gb|EIP13607.1| ribosome-associated GTPase EngA [Escherichia coli EC4421]
gi|390860941|gb|EIP23223.1| ribosome-associated GTPase EngA [Escherichia coli EC4422]
gi|390864871|gb|EIP26940.1| ribosome-associated GTPase EngA [Escherichia coli EC4013]
gi|390870209|gb|EIP31768.1| ribosome-associated GTPase EngA [Escherichia coli EC4402]
gi|390878231|gb|EIP39106.1| ribosome-associated GTPase EngA [Escherichia coli EC4439]
gi|390883310|gb|EIP43752.1| ribosome-associated GTPase EngA [Escherichia coli EC4436]
gi|390892967|gb|EIP52537.1| ribosome-associated GTPase EngA [Escherichia coli EC4437]
gi|390895487|gb|EIP54952.1| ribosome-associated GTPase EngA [Escherichia coli EC4448]
gi|390900095|gb|EIP59331.1| ribosome-associated GTPase EngA [Escherichia coli EC1738]
gi|390907490|gb|EIP66343.1| ribosome-associated GTPase EngA [Escherichia coli EC1734]
gi|390918705|gb|EIP77094.1| ribosome-associated GTPase EngA [Escherichia coli EC1863]
gi|391251508|gb|EIQ10723.1| GTPase Der [Shigella flexneri K-1770]
gi|391304851|gb|EIQ62653.1| GTPase Der [Escherichia coli EPECa12]
gi|391312024|gb|EIQ69647.1| small GTP-binding domain protein [Escherichia coli EPEC C342-62]
gi|394383758|gb|EJE61345.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9634]
gi|394393288|gb|EJE69977.1| GTP-binding protein Der [Escherichia coli O111:H8 str. CVM9602]
gi|394396705|gb|EJE73037.1| GTP-binding protein EngA [Escherichia coli O26:H11 str. CVM10224]
gi|394398237|gb|EJE74425.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9553]
gi|394400235|gb|EJE76171.1| GTP-binding protein Der [Escherichia coli O111:H11 str. CVM9455]
gi|394413803|gb|EJE87797.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM10021]
gi|394421290|gb|EJE94766.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM9952]
gi|394430596|gb|EJF02910.1| GTP-binding protein Der [Escherichia coli O26:H11 str. CVM10030]
gi|397785059|gb|EJK95912.1| small GTP-binding domain protein [Escherichia coli STEC_O31]
gi|404290615|gb|EJZ47522.1| GTPase Der [Escherichia sp. 1_1_43]
gi|406776659|gb|AFS56083.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407053228|gb|AFS73279.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2011C-3493]
gi|407066442|gb|AFS87489.1| GTP-binding protein Der [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408064412|gb|EKG98894.1| ribosome-associated GTPase EngA [Escherichia coli PA7]
gi|408066321|gb|EKH00780.1| ribosome-associated GTPase EngA [Escherichia coli FRIK920]
gi|408079120|gb|EKH13248.1| ribosome-associated GTPase EngA [Escherichia coli FDA506]
gi|408082586|gb|EKH16552.1| ribosome-associated GTPase EngA [Escherichia coli FDA507]
gi|408090997|gb|EKH24234.1| ribosome-associated GTPase EngA [Escherichia coli FDA504]
gi|408097389|gb|EKH30288.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1999]
gi|408108266|gb|EKH40283.1| ribosome-associated GTPase EngA [Escherichia coli NE1487]
gi|408114668|gb|EKH46194.1| ribosome-associated GTPase EngA [Escherichia coli NE037]
gi|408120606|gb|EKH51582.1| ribosome-associated GTPase EngA [Escherichia coli FRIK2001]
gi|408127198|gb|EKH57702.1| ribosome-associated GTPase EngA [Escherichia coli PA4]
gi|408137506|gb|EKH67207.1| ribosome-associated GTPase EngA [Escherichia coli PA23]
gi|408139737|gb|EKH69334.1| ribosome-associated GTPase EngA [Escherichia coli PA49]
gi|408145794|gb|EKH74944.1| ribosome-associated GTPase EngA [Escherichia coli PA45]
gi|408154827|gb|EKH83157.1| ribosome-associated GTPase EngA [Escherichia coli TT12B]
gi|408159589|gb|EKH87642.1| ribosome-associated GTPase EngA [Escherichia coli MA6]
gi|408163438|gb|EKH91304.1| ribosome-associated GTPase EngA [Escherichia coli 5905]
gi|408173192|gb|EKI00238.1| ribosome-associated GTPase EngA [Escherichia coli CB7326]
gi|408179701|gb|EKI06355.1| ribosome-associated GTPase EngA [Escherichia coli EC96038]
gi|408182460|gb|EKI08966.1| ribosome-associated GTPase EngA [Escherichia coli 5412]
gi|408192938|gb|EKI18497.1| ribosome-associated GTPase EngA [Escherichia coli TW15901]
gi|408201383|gb|EKI26538.1| ribosome-associated GTPase EngA [Escherichia coli TW00353]
gi|408217242|gb|EKI41518.1| ribosome-associated GTPase EngA [Escherichia coli PA38]
gi|408226772|gb|EKI50396.1| ribosome-associated GTPase EngA [Escherichia coli EC1735]
gi|408237946|gb|EKI60781.1| ribosome-associated GTPase EngA [Escherichia coli EC1736]
gi|408241897|gb|EKI64502.1| ribosome-associated GTPase EngA [Escherichia coli EC1737]
gi|408246279|gb|EKI68577.1| ribosome-associated GTPase EngA [Escherichia coli EC1846]
gi|408255113|gb|EKI76576.1| ribosome-associated GTPase EngA [Escherichia coli EC1847]
gi|408258544|gb|EKI79804.1| ribosome-associated GTPase EngA [Escherichia coli EC1848]
gi|408265063|gb|EKI85818.1| ribosome-associated GTPase EngA [Escherichia coli EC1849]
gi|408273772|gb|EKI93812.1| ribosome-associated GTPase EngA [Escherichia coli EC1850]
gi|408276714|gb|EKI96598.1| ribosome-associated GTPase EngA [Escherichia coli EC1856]
gi|408285841|gb|EKJ04824.1| ribosome-associated GTPase EngA [Escherichia coli EC1862]
gi|408290648|gb|EKJ09352.1| ribosome-associated GTPase EngA [Escherichia coli EC1864]
gi|408295558|gb|EKJ13863.1| ribosome-associated GTPase EngA [Escherichia coli EC1865]
gi|408307336|gb|EKJ24677.1| ribosome-associated GTPase EngA [Escherichia coli EC1868]
gi|408307656|gb|EKJ24985.1| ribosome-associated GTPase EngA [Escherichia coli EC1866]
gi|408318656|gb|EKJ34859.1| ribosome-associated GTPase EngA [Escherichia coli EC1869]
gi|408324641|gb|EKJ40567.1| ribosome-associated GTPase EngA [Escherichia coli EC1870]
gi|408325856|gb|EKJ41701.1| ribosome-associated GTPase EngA [Escherichia coli NE098]
gi|408336096|gb|EKJ50895.1| ribosome-associated GTPase EngA [Escherichia coli FRIK523]
gi|408343247|gb|EKJ57651.1| ribosome-associated GTPase EngA [Escherichia coli 0.1288]
gi|408345971|gb|EKJ60282.1| ribosome-associated GTPase EngA [Escherichia coli 0.1304]
gi|408460427|gb|EKJ84206.1| ribosome-associated GTPase EngA [Escherichia coli AD30]
gi|408549140|gb|EKK26502.1| ribosome-associated GTPase EngA [Escherichia coli 3.4870]
gi|408549248|gb|EKK26609.1| ribosome-associated GTPase EngA [Escherichia coli 5.2239]
gi|408550420|gb|EKK27749.1| ribosome-associated GTPase EngA [Escherichia coli 6.0172]
gi|408567700|gb|EKK43754.1| ribosome-associated GTPase EngA [Escherichia coli 8.0566]
gi|408568503|gb|EKK44534.1| ribosome-associated GTPase EngA [Escherichia coli 8.0569]
gi|408568604|gb|EKK44633.1| ribosome-associated GTPase EngA [Escherichia coli 8.0586]
gi|408578461|gb|EKK53979.1| ribosome-associated GTPase EngA [Escherichia coli 10.0833]
gi|408580906|gb|EKK56279.1| ribosome-associated GTPase EngA [Escherichia coli 8.2524]
gi|408596059|gb|EKK70251.1| ribosome-associated GTPase EngA [Escherichia coli 88.0221]
gi|408600693|gb|EKK74526.1| ribosome-associated GTPase EngA [Escherichia coli 8.0416]
gi|408612234|gb|EKK85579.1| ribosome-associated GTPase EngA [Escherichia coli 10.0821]
gi|421933096|gb|EKT90890.1| GTP-binding protein EngA [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421937588|gb|EKT95197.1| GTP-binding protein EngA [Escherichia coli O111:H11 str.
CFSAN001630]
gi|421939051|gb|EKT96582.1| GTP-binding protein EngA [Escherichia coli O111:H8 str.
CFSAN001632]
gi|427204355|gb|EKV74632.1| ribosome-associated GTPase EngA [Escherichia coli 88.1042]
gi|427206408|gb|EKV76621.1| ribosome-associated GTPase EngA [Escherichia coli 89.0511]
gi|427220495|gb|EKV89415.1| ribosome-associated GTPase EngA [Escherichia coli 90.0091]
gi|427223920|gb|EKV92645.1| ribosome-associated GTPase EngA [Escherichia coli 90.2281]
gi|427241480|gb|EKW08911.1| ribosome-associated GTPase EngA [Escherichia coli 93.0056]
gi|427241980|gb|EKW09399.1| ribosome-associated GTPase EngA [Escherichia coli 93.0055]
gi|427245639|gb|EKW12920.1| ribosome-associated GTPase EngA [Escherichia coli 94.0618]
gi|427260554|gb|EKW26537.1| ribosome-associated GTPase EngA [Escherichia coli 95.0183]
gi|427261059|gb|EKW27009.1| ribosome-associated GTPase EngA [Escherichia coli 95.0943]
gi|427264271|gb|EKW29961.1| ribosome-associated GTPase EngA [Escherichia coli 95.1288]
gi|427276125|gb|EKW40704.1| ribosome-associated GTPase EngA [Escherichia coli 96.0428]
gi|427278854|gb|EKW43309.1| ribosome-associated GTPase EngA [Escherichia coli 96.0427]
gi|427282986|gb|EKW47224.1| ribosome-associated GTPase EngA [Escherichia coli 96.0939]
gi|427291466|gb|EKW54868.1| ribosome-associated GTPase EngA [Escherichia coli 96.0932]
gi|427298916|gb|EKW61906.1| ribosome-associated GTPase EngA [Escherichia coli 96.0107]
gi|427300124|gb|EKW63076.1| ribosome-associated GTPase EngA [Escherichia coli 97.0003]
gi|427311959|gb|EKW74129.1| ribosome-associated GTPase EngA [Escherichia coli 97.1742]
gi|427315037|gb|EKW77052.1| ribosome-associated GTPase EngA [Escherichia coli 97.0007]
gi|427319316|gb|EKW81138.1| ribosome-associated GTPase EngA [Escherichia coli 99.0672]
gi|427327384|gb|EKW88773.1| ribosome-associated GTPase EngA [Escherichia coli 99.0678]
gi|427328844|gb|EKW90195.1| ribosome-associated GTPase EngA [Escherichia coli 99.0713]
gi|429253328|gb|EKY37818.1| ribosome-associated GTPase EngA [Escherichia coli 96.0109]
gi|429254899|gb|EKY39256.1| ribosome-associated GTPase EngA [Escherichia coli 97.0010]
gi|429348252|gb|EKY85022.1| GTPase Der [Escherichia coli O104:H4 str. 11-02092]
gi|429358998|gb|EKY95664.1| GTPase Der [Escherichia coli O104:H4 str. 11-02030]
gi|429361329|gb|EKY97984.1| GTPase Der [Escherichia coli O104:H4 str. 11-02093]
gi|429361636|gb|EKY98289.1| GTPase Der [Escherichia coli O104:H4 str. 11-02033-1]
gi|429364276|gb|EKZ00896.1| GTPase Der [Escherichia coli O104:H4 str. 11-02318]
gi|429375125|gb|EKZ11663.1| GTPase Der [Escherichia coli O104:H4 str. 11-02913]
gi|429376282|gb|EKZ12811.1| GTPase Der [Escherichia coli O104:H4 str. 11-02281]
gi|429378591|gb|EKZ15099.1| GTPase Der [Escherichia coli O104:H4 str. 11-03439]
gi|429379455|gb|EKZ15955.1| GTPase Der [Escherichia coli O104:H4 str. 11-03943]
gi|429391158|gb|EKZ27563.1| GTPase Der [Escherichia coli O104:H4 str. 11-04080]
gi|429405522|gb|EKZ41788.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4984]
gi|429406058|gb|EKZ42319.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9990]
gi|429409963|gb|EKZ46188.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9450]
gi|429413875|gb|EKZ50055.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4987]
gi|429420653|gb|EKZ56778.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4986]
gi|429428825|gb|EKZ64900.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-5604]
gi|429432378|gb|EKZ68418.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-4988]
gi|429436584|gb|EKZ72600.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-5603]
gi|429438789|gb|EKZ74782.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-6006]
gi|429447158|gb|EKZ83082.1| GTPase Der [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451411|gb|EKZ87302.1| GTPase Der [Escherichia coli O104:H4 str. Ec11-9941]
gi|429458069|gb|EKZ93907.1| GTPase Der [Escherichia coli O104:H4 str. Ec12-0466]
gi|430884538|gb|ELC07477.1| GTPase Der [Escherichia coli KTE10]
gi|430897741|gb|ELC19935.1| GTPase Der [Escherichia coli KTE12]
gi|430938097|gb|ELC58340.1| GTPase Der [Escherichia coli KTE44]
gi|430979135|gb|ELC95921.1| GTPase Der [Escherichia coli KTE193]
gi|431006383|gb|ELD21389.1| GTPase Der [Escherichia coli KTE210]
gi|431073846|gb|ELD81484.1| GTPase Der [Escherichia coli KTE236]
gi|431079219|gb|ELD86189.1| GTPase Der [Escherichia coli KTE237]
gi|431092772|gb|ELD98453.1| GTPase Der [Escherichia coli KTE51]
gi|431114448|gb|ELE17990.1| GTPase Der [Escherichia coli KTE56]
gi|431158402|gb|ELE59001.1| GTPase Der [Escherichia coli KTE76]
gi|431162746|gb|ELE63187.1| GTPase Der [Escherichia coli KTE77]
gi|431170493|gb|ELE70686.1| GTPase Der [Escherichia coli KTE81]
gi|431198681|gb|ELE97464.1| GTPase Der [Escherichia coli KTE111]
gi|431209898|gb|ELF07965.1| GTPase Der [Escherichia coli KTE119]
gi|431213442|gb|ELF11316.1| GTPase Der [Escherichia coli KTE142]
gi|431221057|gb|ELF18379.1| GTPase Der [Escherichia coli KTE156]
gi|431226389|gb|ELF23554.1| GTPase Der [Escherichia coli KTE161]
gi|431242171|gb|ELF36592.1| GTPase Der [Escherichia coli KTE171]
gi|431281791|gb|ELF72690.1| GTPase Der [Escherichia coli KTE42]
gi|431310044|gb|ELF98237.1| GTPase Der [Escherichia coli KTE48]
gi|431354833|gb|ELG41559.1| GTPase Der [Escherichia coli KTE91]
gi|431362948|gb|ELG49526.1| GTPase Der [Escherichia coli KTE101]
gi|431363653|gb|ELG50206.1| GTPase Der [Escherichia coli KTE115]
gi|431374846|gb|ELG60191.1| GTPase Der [Escherichia coli KTE135]
gi|431384629|gb|ELG68675.1| GTPase Der [Escherichia coli KTE136]
gi|431410433|gb|ELG93595.1| GTPase Der [Escherichia coli KTE147]
gi|431419778|gb|ELH02118.1| GTPase Der [Escherichia coli KTE154]
gi|431452191|gb|ELH32640.1| GTPase Der [Escherichia coli KTE184]
gi|431458336|gb|ELH38673.1| GTPase Der [Escherichia coli KTE196]
gi|431466916|gb|ELH46932.1| GTPase Der [Escherichia coli KTE197]
gi|431470006|gb|ELH49930.1| GTPase Der [Escherichia coli KTE203]
gi|431549729|gb|ELI23805.1| GTPase Der [Escherichia coli KTE112]
gi|431555369|gb|ELI29211.1| GTPase Der [Escherichia coli KTE117]
gi|431563704|gb|ELI36902.1| GTPase Der [Escherichia coli KTE120]
gi|431609568|gb|ELI78885.1| GTPase Der [Escherichia coli KTE138]
gi|431645850|gb|ELJ13394.1| GTPase Der [Escherichia coli KTE163]
gi|431655649|gb|ELJ22680.1| GTPase Der [Escherichia coli KTE166]
gi|431715068|gb|ELJ79237.1| GTPase Der [Escherichia coli KTE90]
gi|441607801|emb|CCP95952.1| GTP-binding protein EngA [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441652212|emb|CCQ02274.1| GTP-binding protein EngA [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|443423074|gb|AGC87978.1| GTP-binding protein Der [Escherichia coli APEC O78]
gi|444537773|gb|ELV17682.1| ribosome-associated GTPase EngA [Escherichia coli 99.0814]
gi|444539334|gb|ELV19100.1| ribosome-associated GTPase EngA [Escherichia coli 09BKT078844]
gi|444547143|gb|ELV25771.1| ribosome-associated GTPase EngA [Escherichia coli 99.0815]
gi|444556933|gb|ELV34298.1| ribosome-associated GTPase EngA [Escherichia coli 99.0839]
gi|444557758|gb|ELV35083.1| ribosome-associated GTPase EngA [Escherichia coli 99.0816]
gi|444572585|gb|ELV49007.1| ribosome-associated GTPase EngA [Escherichia coli 99.1753]
gi|444592921|gb|ELV68159.1| ribosome-associated GTPase EngA [Escherichia coli PA11]
gi|444593192|gb|ELV68423.1| ribosome-associated GTPase EngA [Escherichia coli ATCC 700728]
gi|444594764|gb|ELV69919.1| ribosome-associated GTPase EngA [Escherichia coli 99.1805]
gi|444606364|gb|ELV80983.1| ribosome-associated GTPase EngA [Escherichia coli PA13]
gi|444606769|gb|ELV81375.1| ribosome-associated GTPase EngA [Escherichia coli PA19]
gi|444615308|gb|ELV89514.1| ribosome-associated GTPase EngA [Escherichia coli PA2]
gi|444622830|gb|ELV96774.1| ribosome-associated GTPase EngA [Escherichia coli PA47]
gi|444623674|gb|ELV97591.1| ribosome-associated GTPase EngA [Escherichia coli PA48]
gi|444629348|gb|ELW03052.1| ribosome-associated GTPase EngA [Escherichia coli PA8]
gi|444638189|gb|ELW11540.1| ribosome-associated GTPase EngA [Escherichia coli 7.1982]
gi|444640514|gb|ELW13773.1| ribosome-associated GTPase EngA [Escherichia coli 99.1781]
gi|444644874|gb|ELW17969.1| ribosome-associated GTPase EngA [Escherichia coli 99.1762]
gi|444653962|gb|ELW26657.1| ribosome-associated GTPase EngA [Escherichia coli PA35]
gi|444663950|gb|ELW36154.1| ribosome-associated GTPase EngA [Escherichia coli 95.0083]
gi|444669401|gb|ELW41384.1| ribosome-associated GTPase EngA [Escherichia coli 99.0670]
gi|449316968|gb|EMD07064.1| GTP-binding protein EngA [Escherichia coli O08]
gi|449319211|gb|EMD09266.1| GTP-binding protein EngA [Escherichia coli S17]
Length = 490
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|424815436|ref|ZP_18240587.1| putative GTP-binding factor [Escherichia fergusonii ECD227]
gi|325496456|gb|EGC94315.1| putative GTP-binding factor [Escherichia fergusonii ECD227]
Length = 499
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|194432132|ref|ZP_03064421.1| ribosome-associated GTPase EngA [Shigella dysenteriae 1012]
gi|417673220|ref|ZP_12322675.1| small GTP-binding domain protein [Shigella dysenteriae 155-74]
gi|420348427|ref|ZP_14849813.1| GTPase Der [Shigella boydii 965-58]
gi|194419661|gb|EDX35741.1| ribosome-associated GTPase EngA [Shigella dysenteriae 1012]
gi|332089695|gb|EGI94796.1| small GTP-binding domain protein [Shigella dysenteriae 155-74]
gi|391268903|gb|EIQ27822.1| GTPase Der [Shigella boydii 965-58]
Length = 490
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLLRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|422780588|ref|ZP_16833373.1| ribosome GTPase EngA [Escherichia coli TW10509]
gi|323977306|gb|EGB72392.1| ribosome GTPase EngA [Escherichia coli TW10509]
Length = 490
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDIAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|417713564|ref|ZP_12362529.1| small GTP-binding domain protein [Shigella flexneri K-272]
gi|417718403|ref|ZP_12367300.1| small GTP-binding domain protein [Shigella flexneri K-227]
gi|333002306|gb|EGK21870.1| small GTP-binding domain protein [Shigella flexneri K-272]
gi|333016129|gb|EGK35461.1| small GTP-binding domain protein [Shigella flexneri K-227]
Length = 490
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|227887546|ref|ZP_04005351.1| GTP-binding protein [Escherichia coli 83972]
gi|300981973|ref|ZP_07175819.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1]
gi|300998067|ref|ZP_07181927.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1]
gi|301047143|ref|ZP_07194239.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1]
gi|422364844|ref|ZP_16445354.1| ribosome-associated GTPase EngA [Escherichia coli MS 153-1]
gi|422377488|ref|ZP_16457727.1| ribosome-associated GTPase EngA [Escherichia coli MS 60-1]
gi|227835896|gb|EEJ46362.1| GTP-binding protein [Escherichia coli 83972]
gi|300300945|gb|EFJ57330.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1]
gi|300304046|gb|EFJ58566.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1]
gi|300408868|gb|EFJ92406.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1]
gi|315292449|gb|EFU51801.1| ribosome-associated GTPase EngA [Escherichia coli MS 153-1]
gi|324011217|gb|EGB80436.1| ribosome-associated GTPase EngA [Escherichia coli MS 60-1]
Length = 499
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|422806467|ref|ZP_16854899.1| ribosome GTPase EngA [Escherichia fergusonii B253]
gi|324113005|gb|EGC06981.1| ribosome GTPase EngA [Escherichia fergusonii B253]
Length = 490
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLTPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|300820819|ref|ZP_07100969.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7]
gi|300927126|ref|ZP_07142874.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1]
gi|300930151|ref|ZP_07145572.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1]
gi|300951784|ref|ZP_07165599.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1]
gi|300958859|ref|ZP_07170967.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1]
gi|301302868|ref|ZP_07208996.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1]
gi|301330398|ref|ZP_07223040.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1]
gi|301648266|ref|ZP_07248009.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1]
gi|309794442|ref|ZP_07688865.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7]
gi|415862459|ref|ZP_11535925.1| ribosome-associated GTPase EngA [Escherichia coli MS 85-1]
gi|419803534|ref|ZP_14328704.1| ribosome-associated GTPase EngA [Escherichia coli AI27]
gi|422351893|ref|ZP_16432698.1| ribosome-associated GTPase EngA [Escherichia coli MS 117-3]
gi|300314511|gb|EFJ64295.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1]
gi|300416896|gb|EFK00207.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1]
gi|300448981|gb|EFK12601.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1]
gi|300461957|gb|EFK25450.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1]
gi|300526572|gb|EFK47641.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7]
gi|300841803|gb|EFK69563.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1]
gi|300843627|gb|EFK71387.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1]
gi|301073653|gb|EFK88459.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1]
gi|308121898|gb|EFO59160.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7]
gi|315256531|gb|EFU36499.1| ribosome-associated GTPase EngA [Escherichia coli MS 85-1]
gi|324020071|gb|EGB89290.1| ribosome-associated GTPase EngA [Escherichia coli MS 117-3]
gi|384473446|gb|EIE57487.1| ribosome-associated GTPase EngA [Escherichia coli AI27]
Length = 499
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|301632619|ref|XP_002945379.1| PREDICTED: hypothetical protein LOC100487340 [Xenopus (Silurana)
tropicalis]
Length = 937
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/379 (49%), Positives = 265/379 (69%), Gaps = 5/379 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT SRDA+VA++ GLTRDRHYG G GK ++I+IDTGGF
Sbjct: 8 MKPVIALVGRPNVGKSTLFNRLTRSRDAIVADFAGLTRDRHYGNGRQGKHAYIVIDTGGF 67
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ GI EM KQT+QA+ ESD+++F+VD R G+ QD I+N+LR+ G+P +LV NK
Sbjct: 68 EPDASSGIFREMAKQTRQAVAESDVVLFVVDARAGVSAQDHGISNYLRRLGKPCLLVANK 127
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E + S L +FYELG+G + +SA +G G++ +E L + LP + +
Sbjct: 128 AEGMQSGAQLSEFYELGLGEVYPVSAAHGQGVRGLVERALEPLNLPDPDAGAAELQEGLG 187
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ K+A+ G+PNVGKSTLIN+ LGE R++ +D PGTTRD+I FE +K+ LIDTA
Sbjct: 188 PV---KLAVAGRPNVGKSTLINTWLGEERLVAFDLPGTTRDAISVPFERQGQKFELIDTA 244
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ + FE IEKFSV+KTL++I ANVV+LLLDA Q ++ QD +IA +I ESGR++++
Sbjct: 245 GLRRKGRVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVI 304
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ QR+++ +I+ +L+FL FA +FISA K + SI + ++
Sbjct: 305 AVNKWDAVDDYQRQMLGRSIEARLSFLKFANLHFISAQKRQGLGPLWTSIMQAHKAAGCK 364
Query: 359 LSTSRITRALISAIKNHPP 377
+ T +TR L+ +++ P
Sbjct: 365 MPTPILTRLLLESVQFQTP 383
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 7 LVGRPNVGKSTLFNRLTNSR----DALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
LVG N GKSTLFN L +R D L A TR + + +S + DT GF
Sbjct: 751 LVGYTNAGKSTLFNALVKARAYAADQLFATLDTTTRQLYLQD---AGRSVSLSDTVGFIR 807
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQG----LVEQDKLITNFLRKSGQPIVLVI 118
++ G++ + + T Q +++D+++ +VD ++Q + + + P +LV
Sbjct: 808 DLPHGLV-DAFQATLQEAVDADLLLHVVDAANPHFPEQIQQVQTVLADIDAVDIPQLLVF 866
Query: 119 NKSENI---NSSISL-DFYEL-GIGNPHI-ISALYGNGIKNFLENI 158
NK + + S+ L D YE+ G P + +SA G G++ + +
Sbjct: 867 NKLDALAPEQRSLQLQDSYEMDGRPVPRVFLSARTGEGLQALRQQL 912
>gi|417828922|ref|ZP_12475473.1| small GTP-binding domain protein [Shigella flexneri J1713]
gi|335574777|gb|EGM61095.1| small GTP-binding domain protein [Shigella flexneri J1713]
Length = 490
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 ADGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|220935213|ref|YP_002514112.1| GTP-binding protein EngA [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254783176|sp|B8GTN1.1|DER_THISH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219996523|gb|ACL73125.1| GTP-binding protein EngA [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 464
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/419 (46%), Positives = 282/419 (67%), Gaps = 7/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN+LT SRDALVA++PGLTRDR YG G +G ++++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNQLTRSRDALVADFPGLTRDRQYGPGRVGGFPYMVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + + + M +QT+QAI ESD+++F+VDGR+GL D+ I LR G+ ++LV+NK
Sbjct: 61 SGEAET-LDNLMARQTQQAIDESDVVLFLVDGREGLTAADQAIARSLRTQGKKVLLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ +++ ++ +F+ LG G P I+A +G G+ + + + LP + +
Sbjct: 120 TDGVDADQAMAEFHALGFGAPIPIAATHGRGVLGLMNAVHAL-LPEVEEIQ----AEAER 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++A VG+PN GKSTLIN +LGE RV+ + PGTTRDSI FE + ++Y LIDTAG
Sbjct: 175 WPGIRIAFVGRPNAGKSTLINRILGEERVVATEIPGTTRDSIFIPFERDGQQYTLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR++ E IEKFSV+KTL++I A+VV+++LDA++ IS QD ++ + ++GR+L+V
Sbjct: 235 VRRRSRVHEAIEKFSVVKTLQAIDAAHVVVMVLDAREGISEQDAHLLGVVLDAGRALVVA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +QR I++ + KL FL FA FISA+ + + YDS+ I +
Sbjct: 295 INKWDGLDPDQRDRIRHELDLKLPFLDFAEKRFISALHGTGVGDLFAHVKRAYDSAFIKV 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+ +T+ L SA+ H P R KLRYAHQGG+NPPIIVIHGN + + YKRYL
Sbjct: 355 STNHLTKLLESAMVAHQPPLVSGRRVKLRYAHQGGQNPPIIVIHGNMTERLPGSYKRYL 413
>gi|417690635|ref|ZP_12339855.1| small GTP-binding domain protein [Shigella boydii 5216-82]
gi|332087958|gb|EGI93083.1| small GTP-binding domain protein [Shigella boydii 5216-82]
Length = 490
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|293410925|ref|ZP_06654501.1| ribosome-associated GTPase EngA [Escherichia coli B354]
gi|291471393|gb|EFF13877.1| ribosome-associated GTPase EngA [Escherichia coli B354]
Length = 499
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTENGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|387507876|ref|YP_006160132.1| GTP-binding protein Der [Escherichia coli O55:H7 str. RM12579]
gi|419127034|ref|ZP_13671918.1| small GTP-binding domain protein [Escherichia coli DEC5C]
gi|419132525|ref|ZP_13677362.1| small GTP-binding domain protein [Escherichia coli DEC5D]
gi|374359870|gb|AEZ41577.1| GTP-binding protein Der [Escherichia coli O55:H7 str. RM12579]
gi|377974090|gb|EHV37419.1| small GTP-binding domain protein [Escherichia coli DEC5C]
gi|377975488|gb|EHV38809.1| small GTP-binding domain protein [Escherichia coli DEC5D]
Length = 490
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLRQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|117624740|ref|YP_853653.1| GTP-binding protein EngA [Escherichia coli APEC O1]
gi|237705021|ref|ZP_04535502.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA]
gi|91073411|gb|ABE08292.1| probable GTP-binding protein EngA [Escherichia coli UTI89]
gi|115513864|gb|ABJ01939.1| putative GTP-binding protein EngA [Escherichia coli APEC O1]
gi|226901387|gb|EEH87646.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA]
Length = 503
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 14 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 74 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 132
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 133 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYL 451
>gi|260776629|ref|ZP_05885524.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450]
gi|260607852|gb|EEX34117.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450]
Length = 495
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/444 (44%), Positives = 294/444 (66%), Gaps = 28/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D I+N LRK +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDIAISNHLRKIEKPSMLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL-------------TIE---- 162
+ I++ + S DF++LG+ + + I+A +G G+ ++ L IE
Sbjct: 120 VDGIDADAASADFWQLGVESMYQIAAAHGRGVGALIDRALNPFAEKMAEEARGEIEDLTD 179
Query: 163 --------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
L Y + + EF + + IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 FIDEDEEKLDYTEEEAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 238
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 239 GTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVVKTLKAVEDANVVLLVIDA 298
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +FIS
Sbjct: 299 RENISDQDLSLLGFALNAGRSIVIAVNKWDGLDMDVKEHVKKELDRRLGFVDFARIHFIS 358
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + ES+ Y S+ + TS +TR + A ++H P + R KL+YAH GG
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATEDHQPPLVRGRRVKLKYAHAGG 418
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++ + + YKRYL
Sbjct: 419 YNPPIVVIHGNQVNELPDSYKRYL 442
>gi|331643131|ref|ZP_08344266.1| ribosome-associated GTPase EngA [Escherichia coli H736]
gi|331653939|ref|ZP_08354940.1| ribosome-associated GTPase EngA [Escherichia coli M718]
gi|331678502|ref|ZP_08379177.1| ribosome-associated GTPase EngA [Escherichia coli H591]
gi|332278336|ref|ZP_08390749.1| conserved hypothetical protein [Shigella sp. D9]
gi|418957117|ref|ZP_13509041.1| ribosome-associated GTPase EngA [Escherichia coli J53]
gi|427805692|ref|ZP_18972759.1| putative GTP-binding factor [Escherichia coli chi7122]
gi|427810188|ref|ZP_18977253.1| putative GTP-binding factor [Escherichia coli]
gi|25328223|pir||E91050 probable GTP-binding factor [imported] - Escherichia coli (strain
O157:H7, substrain RIMD 0509952)
gi|25328252|pir||A85895 probable GTP-binding factor Z3774 [imported] - Escherichia coli
(strain O157:H7, substrain EDL933)
gi|12516902|gb|AAG57621.1|AE005480_8 putative GTP-binding factor [Escherichia coli O157:H7 str. EDL933]
gi|13362843|dbj|BAB36796.1| putative GTP-binding factor [Escherichia coli O157:H7 str. Sakai]
gi|209763418|gb|ACI80021.1| putative GTP-binding factor [Escherichia coli]
gi|209763420|gb|ACI80022.1| putative GTP-binding factor [Escherichia coli]
gi|209763422|gb|ACI80023.1| putative GTP-binding factor [Escherichia coli]
gi|209763426|gb|ACI80025.1| putative GTP-binding factor [Escherichia coli]
gi|331039929|gb|EGI12149.1| ribosome-associated GTPase EngA [Escherichia coli H736]
gi|331048788|gb|EGI20864.1| ribosome-associated GTPase EngA [Escherichia coli M718]
gi|331074962|gb|EGI46282.1| ribosome-associated GTPase EngA [Escherichia coli H591]
gi|332100688|gb|EGJ04034.1| conserved hypothetical protein [Shigella sp. D9]
gi|384379764|gb|EIE37631.1| ribosome-associated GTPase EngA [Escherichia coli J53]
gi|412963874|emb|CCK47800.1| putative GTP-binding factor [Escherichia coli chi7122]
gi|412970367|emb|CCJ45013.1| putative GTP-binding factor [Escherichia coli]
Length = 503
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 14 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 74 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYL 451
>gi|331648208|ref|ZP_08349298.1| ribosome-associated GTPase EngA [Escherichia coli M605]
gi|386630281|ref|YP_006150001.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i2']
gi|386635201|ref|YP_006154920.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i14']
gi|26109281|gb|AAN81483.1|AE016764_165 Probable GTP-binding protein engA [Escherichia coli CFT073]
gi|331043068|gb|EGI15208.1| ribosome-associated GTPase EngA [Escherichia coli M605]
gi|355421180|gb|AER85377.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i2']
gi|355426100|gb|AER90296.1| GTP-binding protein EngA [Escherichia coli str. 'clone D i14']
Length = 503
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 14 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 74 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 133 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYL 451
>gi|343509880|ref|ZP_08747142.1| GTP-binding protein EngA [Vibrio scophthalmi LMG 19158]
gi|343515692|ref|ZP_08752743.1| GTP-binding protein EngA [Vibrio sp. N418]
gi|342797862|gb|EGU33499.1| GTP-binding protein EngA [Vibrio sp. N418]
gi|342803677|gb|EGU39027.1| GTP-binding protein EngA [Vibrio scophthalmi LMG 19158]
Length = 497
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/446 (45%), Positives = 296/446 (66%), Gaps = 30/446 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFLVDGRAGLTPADQAIAAHLRKIEKPAMLVVNK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENIL---------------TIE-- 162
+ I+ + S DF++LG+G+ + I+A +G G+ ++ L IE
Sbjct: 120 VDGIDPDAASADFWQLGMGDMYQIAAAHGRGVGQLIDLALNPFAEKMIEDQKGEGEIEDL 179
Query: 163 ----------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
L Y + ++EF + + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 TDFIDEDEEKLDYTEEEAEEEFKRLQD-QPIKMAIIGRPNVGKSTLTNRILGEERVVVYD 238
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI E + ++Y+LIDTAGIRRR E +EKFSV+KTLK+I +ANVV+L++
Sbjct: 239 MPGTTRDSIYIPMERDGREYVLIDTAGIRRRKNINETVEKFSVVKTLKAIEDANVVLLVI 298
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F SGRS+++ VNKWD + ++ ++ +K + ++L F+ FA +F
Sbjct: 299 DARENISDQDLSLLGFALNSGRSIVLAVNKWDGLNNDVKEQVKKELDRRLGFVDFARIHF 358
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ES+ Y+S+ + TS +TR + +A +H P + R KL+YAH
Sbjct: 359 ISALHGTGVGHLFESVQEAYNSATTRVGTSVLTRIMKNATDDHQPPMVRGRRVKLKYAHA 418
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPIIVIHGN++K + + YKR+L
Sbjct: 419 GGYNPPIIVIHGNQVKELPDSYKRFL 444
>gi|300817719|ref|ZP_07097934.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1]
gi|300529707|gb|EFK50769.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1]
Length = 499
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 288/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA
Sbjct: 245 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAH 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|432750960|ref|ZP_19985562.1| GTPase Der [Escherichia coli KTE29]
gi|431295978|gb|ELF85708.1| GTPase Der [Escherichia coli KTE29]
Length = 490
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDSVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|343503632|ref|ZP_08741442.1| GTP-binding protein EngA [Vibrio ichthyoenteri ATCC 700023]
gi|342814424|gb|EGU49368.1| GTP-binding protein EngA [Vibrio ichthyoenteri ATCC 700023]
Length = 497
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/446 (45%), Positives = 296/446 (66%), Gaps = 30/446 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFLVDGRAGLTPADQAIATHLRKIEKPAMLVVNK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILT---------------IE-- 162
+ I+ + S DF++LG+G+ + I+A +G G+ ++ L IE
Sbjct: 120 VDGIDPDAASADFWQLGMGDMYQIAAAHGRGVGQLIDLALNPFAEKMIEDSKGEGEIEDL 179
Query: 163 ----------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
L Y + ++EF + + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 TDFIDEDEEKLDYTEEEAEEEFKRLQD-QPIKMAIIGRPNVGKSTLTNRILGEERVVVYD 238
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI E + ++Y+LIDTAGIRRR E +EKFSV+KTLK+I +ANVV+L++
Sbjct: 239 MPGTTRDSIYIPMERDGREYVLIDTAGIRRRKNINETVEKFSVVKTLKAIEDANVVLLVI 298
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F SGRS+++ VNKWD + ++ ++ +K + ++L F+ FA +F
Sbjct: 299 DARENISDQDLSLLGFALNSGRSIVLAVNKWDGLNNDVKEQVKKELDRRLGFVDFARIHF 358
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ES+ Y+S+ + TS +TR + +A +H P + R KL+YAH
Sbjct: 359 ISALHGTGVGHLFESVQEAYNSATTRVGTSVLTRIMKNATDDHQPPMVRGRRVKLKYAHA 418
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPIIVIHGN++K + + YKR+L
Sbjct: 419 GGYNPPIIVIHGNQVKELPDSYKRFL 444
>gi|422333543|ref|ZP_16414553.1| GTPase Der [Escherichia coli 4_1_47FAA]
gi|373245514|gb|EHP64982.1| GTPase Der [Escherichia coli 4_1_47FAA]
Length = 490
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMKMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|374623557|ref|ZP_09696064.1| GTP-binding protein EngA [Ectothiorhodospira sp. PHS-1]
gi|373942665|gb|EHQ53210.1| GTP-binding protein EngA [Ectothiorhodospira sp. PHS-1]
Length = 466
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/419 (46%), Positives = 283/419 (67%), Gaps = 7/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFN+LT SRDALVA+ PGLTRDR YG G +G ++++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNQLTRSRDALVADLPGLTRDRQYGTGRVGGYGYMVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + M +QT+QAI E+D+++F+VDGR GL D+ I LR +PIVLV+NK
Sbjct: 61 SGESDT-LDTLMAQQTRQAIREADLVMFLVDGRAGLCGADETIAQELRGFNKPIVLVVNK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ +++++F+ LG+G P I+A +G GI+ + ++ ++ LP + + E
Sbjct: 120 TDGVDPQAVTVEFHRLGLGEPRSIAASHGRGIQALMASVRSL-LP-EAMDDEDEGERWPG 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I ++A VG+PN GKSTLIN +LGE R++ D PGTTRDS+ FE + + Y LIDTAG
Sbjct: 178 I---RIAFVGRPNAGKSTLINRILGEERMVATDIPGTTRDSVFVPFERDGQVYTLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR++ E +EKFSV+KT+++I A+VVI LLDA++ I+ QD ++ + ++GR+L+V
Sbjct: 235 VRRRSRVKETVEKFSVVKTIQAIDAAHVVIFLLDAREGIAEQDAHLLGMVMDAGRALVVA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +QR +K ++ KL FL FA FISA+ + ++ ++S+ +
Sbjct: 295 INKWDGLTPDQRDRVKTDLLLKLPFLDFAERRFISALHGTGVGDLFGAVQRAHESAFRDM 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
TS +TR L SA+ H P + R KLRYAHQGG+NPP+IVIHGN+ + YKRYL
Sbjct: 355 GTSVLTRLLESAVVAHQPPLVRGRRIKLRYAHQGGRNPPVIVIHGNQTDALPGAYKRYL 413
>gi|419346158|ref|ZP_13887532.1| small GTP-binding domain protein [Escherichia coli DEC13A]
gi|419350618|ref|ZP_13891955.1| small GTP-binding domain protein [Escherichia coli DEC13B]
gi|419356041|ref|ZP_13897298.1| small GTP-binding domain protein [Escherichia coli DEC13C]
gi|419361135|ref|ZP_13902352.1| small GTP-binding domain protein [Escherichia coli DEC13D]
gi|378185606|gb|EHX46231.1| small GTP-binding domain protein [Escherichia coli DEC13A]
gi|378199879|gb|EHX60338.1| small GTP-binding domain protein [Escherichia coli DEC13B]
gi|378200303|gb|EHX60759.1| small GTP-binding domain protein [Escherichia coli DEC13C]
gi|378202782|gb|EHX63209.1| small GTP-binding domain protein [Escherichia coli DEC13D]
Length = 490
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKEMLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|209763424|gb|ACI80024.1| putative GTP-binding factor [Escherichia coli]
Length = 503
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 14 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 74 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLRQEVKEQVKETLDFRLGFIDFARVHFISA 368
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYL 451
>gi|343494444|ref|ZP_08732706.1| GTP-binding protein Der [Vibrio nigripulchritudo ATCC 27043]
gi|342825349|gb|EGU59848.1| GTP-binding protein Der [Vibrio nigripulchritudo ATCC 27043]
Length = 495
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/444 (44%), Positives = 290/444 (65%), Gaps = 28/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAQLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPADEAIAQHLRKIEKPAMLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNF-------------------LENILT 160
+ I++ S DF++LG+ + + I+A +G G+ LE++
Sbjct: 120 VDGIDADSACADFWKLGVDDMYQIAAAHGRGVAALIDRALNPFAEEFAAKTEGELEDLTE 179
Query: 161 IELP------YKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
E P Y + + EF + + IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 FEDPEEEKLDYTEEEAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 238
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 239 GTTRDSIYIPMERDEREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVLLVIDA 298
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +FIS
Sbjct: 299 RENISDQDLSLLGFALNAGRSIVIAVNKWDGLDTDVKEQVKKELDRRLGFVDFARIHFIS 358
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH GG
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMAQDDHQPPMVRGRRVKLKYAHAGG 418
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+V+HGN + + + YKRYL
Sbjct: 419 YNPPIVVVHGNLVHELPDSYKRYL 442
>gi|32455227|gb|AAP83329.1| putative GTP-binding protein [Salmonella enterica subsp. enterica
serovar Enteritidis]
Length = 490
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/439 (45%), Positives = 289/439 (65%), Gaps = 22/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIEL----PYKKFFKKKEFT 175
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L + P ++ + E+
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMDDVAPQEEVDEDAEYW 179
Query: 176 NIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
+E IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 180 AQFEVEQNGEEAPEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 239
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 240 SIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGIS 299
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA+ +
Sbjct: 300 DQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGS 359
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ + ES+ YDSS +ST+ +TR + A+++H P + R KL+YAH GG NPP
Sbjct: 360 GVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPT 419
Query: 400 IVIHGNRLKYIGNDYKRYL 418
+VIHGN++K + + YKRYL
Sbjct: 420 VVIHGNQVKDLPDSYKRYL 438
>gi|336451633|ref|ZP_08622070.1| ribosome-associated GTPase EngA [Idiomarina sp. A28L]
gi|336281446|gb|EGN74726.1| ribosome-associated GTPase EngA [Idiomarina sp. A28L]
Length = 483
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/434 (44%), Positives = 290/434 (66%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+G+ + F+++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTQSRDALVADFPGLTRDRQYGQGHYEEYKFVVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M +Q+ QA+ E+D+++F+VD R G+ D+ I ++LRK + I LV+NK
Sbjct: 61 HGK-EEGLDLMMARQSLQAVDEADVVLFLVDARDGITAADEFIADYLRKQNKKIHLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLE---NILTIELPY----KKFFKKK 172
+ I+ + S DF+ LG+G I+A +G G+ L+ + L E P ++ +
Sbjct: 120 VDGIDGNAASADFFSLGLGEIWQIAAAHGRGVTQLLQATLDPLANEFPDMLANEEQTEAT 179
Query: 173 EFTNIHS--------IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
E T + + IK+AI+G+PNVGKSTL N +LGE RV+ +D PGTTRDS+
Sbjct: 180 ELTEADAEAEIARLQAQPIKLAIIGRPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIP 239
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
E ++Y+LIDTAG+RRR + IEK+SV+KTL++I ANVVIL++DA++ IS QD+N
Sbjct: 240 MEREGREYVLIDTAGVRRRGRIDMAIEKYSVVKTLQAIESANVVILVIDARETISDQDLN 299
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ +GRS+++ VNKWD + ++ R+ IK + ++L F+ FA +FISA+ N+
Sbjct: 300 LLGFVLNAGRSVVIAVNKWDGLDNDAREWIKTELDRRLGFVDFARLHFISALHGTNVGHL 359
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
ES+ Y S+ +ST+++TR + SA H P + R KL++AH GG NPP+IV+HG
Sbjct: 360 FESVQEAYASATQRVSTAQLTRIMESAQDEHQPPLVRGRRVKLKFAHAGGYNPPLIVVHG 419
Query: 405 NRLKYIGNDYKRYL 418
N++ + N YKRYL
Sbjct: 420 NQVTDLPNSYKRYL 433
>gi|161486654|ref|NP_933563.2| GTP-binding protein EngA [Vibrio vulnificus YJ016]
gi|41016999|sp|Q7MNE7.2|DER_VIBVY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
Length = 496
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/444 (43%), Positives = 295/444 (66%), Gaps = 27/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK + +LV+NK
Sbjct: 61 DGS-EEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKN--------FLENILTI---------- 161
+ I++ + S DF++LG+ + I+A +G G+ F +N+L+
Sbjct: 120 VDGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERALDPFFDNLLSTNSEGEIEDLT 179
Query: 162 -----ELPYKKFFKKKEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
E +++ ++ ++ ++ IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 NMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 239
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI E + ++Y+LIDTAG+RRR K E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 240 GTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVVLLVIDA 299
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +FIS
Sbjct: 300 RENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 359
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + ES+ Y S+ + TS +TR + A ++H P + R KL+YAH GG
Sbjct: 360 ALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAHAGG 419
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN+++ + + YKRYL
Sbjct: 420 YNPPIVVIHGNQVRELPDSYKRYL 443
>gi|91225135|ref|ZP_01260357.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01]
gi|269965174|ref|ZP_06179308.1| GTP-binding protein [Vibrio alginolyticus 40B]
gi|91190078|gb|EAS76349.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01]
gi|269830160|gb|EEZ84387.1| GTP-binding protein [Vibrio alginolyticus 40B]
Length = 498
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/447 (44%), Positives = 294/447 (65%), Gaps = 31/447 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
K + I++ + DF++LG+ + + I+A +G G+ LE L+
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALSPFFDDLLTSESEDGEIED 179
Query: 162 ------ELP----YKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
E P Y + + EF + + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTGFEDEEPLVEDYTEEDAEAEFKRLQE-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDSDVKESVKKELDRRLGFVDFARIH 358
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + ESI Y+S+ + TS +TR + A+ +H P + R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYNSATTRVGTSVLTRIMKMAVDDHQPPMVRGRRIKLKYAH 418
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN ++ + + YKRYL
Sbjct: 419 AGGYNPPIVVIHGNMVRELPDSYKRYL 445
>gi|296113385|ref|YP_003627323.1| GTP-binding protein EngA [Moraxella catarrhalis RH4]
gi|416157010|ref|ZP_11604856.1| GTP-binding protein EngA [Moraxella catarrhalis 101P30B1]
gi|416218211|ref|ZP_11624759.1| GTP-binding protein EngA [Moraxella catarrhalis 7169]
gi|416231831|ref|ZP_11628897.1| GTP-binding protein EngA [Moraxella catarrhalis 46P47B1]
gi|416237500|ref|ZP_11631010.1| GTP-binding protein EngA [Moraxella catarrhalis BC1]
gi|416242280|ref|ZP_11633316.1| GTP-binding protein EngA [Moraxella catarrhalis BC7]
gi|416246888|ref|ZP_11635257.1| GTP-binding protein EngA [Moraxella catarrhalis BC8]
gi|416255358|ref|ZP_11639195.1| GTP-binding protein EngA [Moraxella catarrhalis O35E]
gi|295921079|gb|ADG61430.1| GTP-binding protein EngA [Moraxella catarrhalis BBH18]
gi|326559230|gb|EGE09661.1| GTP-binding protein EngA [Moraxella catarrhalis 46P47B1]
gi|326559869|gb|EGE10269.1| GTP-binding protein EngA [Moraxella catarrhalis 7169]
gi|326569645|gb|EGE19697.1| GTP-binding protein EngA [Moraxella catarrhalis BC1]
gi|326570126|gb|EGE20171.1| GTP-binding protein EngA [Moraxella catarrhalis BC8]
gi|326570864|gb|EGE20888.1| GTP-binding protein EngA [Moraxella catarrhalis BC7]
gi|326574414|gb|EGE24356.1| GTP-binding protein EngA [Moraxella catarrhalis 101P30B1]
gi|326576405|gb|EGE26314.1| GTP-binding protein EngA [Moraxella catarrhalis O35E]
Length = 472
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/422 (45%), Positives = 286/422 (67%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+KPV+ L+GRPNVGKSTLFN+LT SR ALVA+ GLTRDR YG+ + KSFI++DTGG
Sbjct: 3 IKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAGLTRDRQYGDAHFENKSFIVVDTGGI 62
Query: 61 EPEVKKG---IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
E+ G I M Q+ AI E+DI++F+VD R GL+ D I +FL G+P+ LV
Sbjct: 63 G-EMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLGKPVFLV 121
Query: 118 INKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
NK + ++ + +F+ LG G P+ +A +G G+ N LE+ LT ++P + K E +
Sbjct: 122 ANKMDGVHEAAYAEFFALGFGEPYATAASHGRGVTNLLES-LTADMP--EDMPKDELDS- 177
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ +K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE + Y+LIDT
Sbjct: 178 ---KTLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPFEREGRSYVLIDT 234
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR + E +EKFSV+KTL++I +ANVV+L++DA++ I QD+++ + ++GR+++
Sbjct: 235 AGVRRRGRIDEKVEKFSVVKTLQAIKDANVVVLVIDAKEGIVDQDLHMLGYALDAGRAIV 294
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V +NKWD + +Q+ +K I ++ NF+ + + ISA+ N + SI+ Y++S+
Sbjct: 295 VAINKWDGLSQDQKDFVKIEIDRRFNFVPWVKIHLISALYGNGVGKLYPSIHKAYEASMF 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST+++TR L A+ +HPP R KLRYAH GG NPP+IVIHGN+ + Y+RY
Sbjct: 355 KVSTNQLTRILEDAVASHPPPMVGGRRIKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|320157270|ref|YP_004189649.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O]
gi|319932582|gb|ADV87446.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O]
Length = 496
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/444 (43%), Positives = 295/444 (66%), Gaps = 27/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK + +LV+NK
Sbjct: 61 DGS-EEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKN--------FLENILTI---------- 161
+ I++ + S DF++LG+ + I+A +G G+ F +N+L+
Sbjct: 120 VDGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERALDPFFDNLLSANSEGEIEDLT 179
Query: 162 -----ELPYKKFFKKKEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
E +++ ++ ++ ++ IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 NMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 239
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI E + ++Y+LIDTAG+RRR K E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 240 GTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVVLLVIDA 299
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +FIS
Sbjct: 300 RENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 359
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + ES+ Y S+ + TS +TR + A ++H P + R KL+YAH GG
Sbjct: 360 ALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAHAGG 419
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN+++ + + YKRYL
Sbjct: 420 YNPPIVVIHGNQVRELPDSYKRYL 443
>gi|37197696|dbj|BAC93534.1| predicted GTP-binding protein [Vibrio vulnificus YJ016]
Length = 511
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/444 (43%), Positives = 295/444 (66%), Gaps = 27/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 16 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI 75
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK + +LV+NK
Sbjct: 76 DGS-EEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNK 134
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKN--------FLENILTI---------- 161
+ I++ + S DF++LG+ + I+A +G G+ F +N+L+
Sbjct: 135 VDGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERALDPFFDNLLSTNSEGEIEDLT 194
Query: 162 -----ELPYKKFFKKKEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
E +++ ++ ++ ++ IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 195 NMEDEEAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 254
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI E + ++Y+LIDTAG+RRR K E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 255 GTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVVLLVIDA 314
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +FIS
Sbjct: 315 RENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHFIS 374
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + ES+ Y S+ + TS +TR + A ++H P + R KL+YAH GG
Sbjct: 375 ALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAHAGG 434
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN+++ + + YKRYL
Sbjct: 435 YNPPIVVIHGNQVRELPDSYKRYL 458
>gi|416268570|ref|ZP_11642199.1| GTP-binding protein EngA [Shigella dysenteriae CDC 74-1112]
gi|320175074|gb|EFW50187.1| GTP-binding protein EngA [Shigella dysenteriae CDC 74-1112]
Length = 490
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-EG 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS Q++++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQELSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|421780191|ref|ZP_16216681.1| GTP-binding protein EngA [Moraxella catarrhalis RH4]
gi|407812985|gb|EKF83769.1| GTP-binding protein EngA [Moraxella catarrhalis RH4]
Length = 472
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/422 (45%), Positives = 286/422 (67%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+KPV+ L+GRPNVGKSTLFN+LT SR ALVA+ GLTRDR YG+ + KSFI++DTGG
Sbjct: 3 IKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAGLTRDRQYGDAHFENKSFIVVDTGGI 62
Query: 61 EPEVKKG---IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
E+ G I M Q+ AI E+DI++F+VD R GL+ D I +FL G+P+ LV
Sbjct: 63 G-EMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLGKPVFLV 121
Query: 118 INKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
NK + ++ + +F+ LG G P+ +A +G G+ N LE+ LT ++P + K E +
Sbjct: 122 ANKMDGVHEAAYAEFFALGFGEPYATAASHGRGVTNLLES-LTADMP--EDMPKDELDS- 177
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ +K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE + Y+LIDT
Sbjct: 178 ---KTLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPFEREGRSYVLIDT 234
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR + E +EKFSV+KTL++I +ANVV+L++DA++ I QD+++ + ++GR+++
Sbjct: 235 AGVRRRGRIDEKVEKFSVVKTLQAIKDANVVVLVIDAKEGIVDQDLHMLRYALDAGRAIV 294
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V +NKWD + +Q+ +K I ++ NF+ + + ISA+ N + SI+ Y++S+
Sbjct: 295 VAINKWDGLSQDQKDFVKIEIDRRFNFVPWVKIHLISALYGNGVGKLYPSIHKAYEASMF 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST+++TR L A+ +HPP R KLRYAH GG NPP+IVIHGN+ + Y+RY
Sbjct: 355 KVSTNQLTRILEDAVASHPPPMVGGRRIKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|221133872|ref|ZP_03560177.1| GTP-binding protein EngA [Glaciecola sp. HTCC2999]
Length = 481
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/435 (45%), Positives = 288/435 (66%), Gaps = 22/435 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PVL LVGRPNVGKSTLFNRLTN+RDALVA++PGLTRDR YG+ + + FI+IDTGG
Sbjct: 1 MLPVLALVGRPNVGKSTLFNRLTNTRDALVADFPGLTRDRKYGQAKVEDRQFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + GI M +Q+ AI E+D+++F+VD R GL D+ I +LRK + + +V NK
Sbjct: 61 TGD-EAGIDAAMAEQSLLAIDEADVVLFLVDARAGLTAADQGIAEYLRKQEKTVYVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I+ S S DFY LG+GN I+A +G G+ L+ L+ P + F
Sbjct: 120 VDGIDGDSESADFYALGMGNVQQIAAAHGRGVAQLLDLTLS---PLAENFPDMIAVEPER 176
Query: 170 ------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKS 223
+K+ + ++ IK+A+VGKPNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 177 NDDDEDAEKQLERLQNLP-IKLAVVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSIFI 235
Query: 224 LFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDI 283
E + ++YILIDTAG+R+R K E +EKFS++KTL++I EANVV+L++DA++ IS QD+
Sbjct: 236 PMERDEREYILIDTAGVRKRRKINEAVEKFSIVKTLQAIEEANVVLLVIDAREGISDQDL 295
Query: 284 NIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINS 343
++ FI +GRSL++ VNKWD + + + IK + ++L F+ FA +FISA+ +
Sbjct: 296 SLLGFILNAGRSLVLAVNKWDGLQAHVKDEIKRELDRRLGFVDFARLHFISALHGTGVGH 355
Query: 344 FMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIH 403
ES+ Y+S+ ++TS +TR + A ++H P + R K++YAH GG NPP++VIH
Sbjct: 356 LFESVQEAYESATRRINTSMLTRIMEMAQEDHNPPLVRSRRVKMKYAHAGGYNPPVVVIH 415
Query: 404 GNRLKYIGNDYKRYL 418
GN++ + + YKRYL
Sbjct: 416 GNQVDDLPDSYKRYL 430
>gi|420381495|ref|ZP_14880942.1| GTPase Der [Shigella dysenteriae 225-75]
gi|391299814|gb|EIQ57753.1| GTPase Der [Shigella dysenteriae 225-75]
Length = 490
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS Q++++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQELSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|254228662|ref|ZP_04922086.1| GTP-binding protein EngA [Vibrio sp. Ex25]
gi|262395114|ref|YP_003286968.1| GTP-binding protein EngA [Vibrio sp. Ex25]
gi|451970701|ref|ZP_21923926.1| GTP-binding protein EngA [Vibrio alginolyticus E0666]
gi|151938841|gb|EDN57675.1| GTP-binding protein EngA [Vibrio sp. Ex25]
gi|262338708|gb|ACY52503.1| GTP-binding protein EngA [Vibrio sp. Ex25]
gi|451933429|gb|EMD81098.1| GTP-binding protein EngA [Vibrio alginolyticus E0666]
Length = 498
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/447 (44%), Positives = 293/447 (65%), Gaps = 31/447 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDAAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
K + I++ + DF++LG+ + + I+A +G G+ LE L+
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALSPFFDDLLTSESEEGEIED 179
Query: 162 ------ELP----YKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
E P Y + + EF + + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTGFEDEEPLVEDYTEEDAEAEFKRLQE-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDSDVKESVKKELDRRLGFVDFARIH 358
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + ESI Y+S+ + TS +TR + A+ +H P + R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYNSATTRVGTSVLTRIMKMAVDDHQPPMVRGRRIKLKYAH 418
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN ++ + + YKRYL
Sbjct: 419 AGGYNPPIVVIHGNMVRELPDSYKRYL 445
>gi|431931237|ref|YP_007244283.1| ribosome-associated GTPase EngA [Thioflavicoccus mobilis 8321]
gi|431829540|gb|AGA90653.1| ribosome-associated GTPase EngA [Thioflavicoccus mobilis 8321]
Length = 470
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/419 (46%), Positives = 274/419 (65%), Gaps = 2/419 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDR YG G +G ++++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRTRDALVADTPGLTRDRQYGIGRLGPVPYVVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + M Q ++AI E+D ++F+VD G V D I LR+ G+ + LV+NK
Sbjct: 61 GGETTD-LAERMAGQVERAIAEADHLLFLVDAHDGCVPGDAEIATRLRRLGKSLTLVVNK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + ++ DF+ LG+G+P I+A+ G G+ +E +LT +
Sbjct: 120 TDQRDPDLATADFHLLGLGDPVPIAAVQGRGVAALMERVLTGLANDDAVGGAEAADADED 179
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E I+VAIVG+PN GKSTLIN LLGE RV+TYD+PGTTRD++ F+ + +Y LIDTAG
Sbjct: 180 PERIQVAIVGRPNAGKSTLINRLLGEERVVTYDSPGTTRDTVFIPFDRLDGRYTLIDTAG 239
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + + IEKFSVIKTL++I +VVIL++DA+ I D +A I ESGR+L+V
Sbjct: 240 VRRRARVQDTIEKFSVIKTLQAIAACHVVILVVDARAGIGEHDATLAGHILESGRALVVA 299
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + R+ +K+++ +KL FL FA ++FISA+ + + + ++ VY ++ L
Sbjct: 300 VNKWDGLDPQARQAVKDDLGRKLAFLDFAAYHFISALHGSGVGLLFDEVDRVYANATRDL 359
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST +TR L +A++ H P R KLRYAHQGG+NPP+IVIHG + + Y+RYL
Sbjct: 360 STPELTRLLEAAVQEHQPPLVHGRRIKLRYAHQGGRNPPLIVIHGTQTDAVPASYQRYL 418
>gi|331673966|ref|ZP_08374729.1| ribosome-associated GTPase EngA [Escherichia coli TA280]
gi|331069239|gb|EGI40631.1| ribosome-associated GTPase EngA [Escherichia coli TA280]
Length = 503
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 288/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 14 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 74 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 309 EGISDQDLSQLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYL 451
>gi|422367772|ref|ZP_16448198.1| ribosome-associated GTPase EngA [Escherichia coli MS 16-3]
gi|315300482|gb|EFU59711.1| ribosome-associated GTPase EngA [Escherichia coli MS 16-3]
Length = 499
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 10 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 70 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 129 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 184
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 185 AEYWAQFEAEENGEEEEADDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 244
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTR+SI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 245 TTRESIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 304
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 305 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 364
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 365 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 424
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 425 NPPIVVIHGNQVKDLPDSYKRYL 447
>gi|187731692|ref|YP_001881302.1| GTP-binding protein EngA [Shigella boydii CDC 3083-94]
gi|238691721|sp|B2TXT6.1|DER_SHIB3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|187428684|gb|ACD07958.1| ribosome-associated GTPase EngA [Shigella boydii CDC 3083-94]
Length = 490
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 288/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 IDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|408372882|ref|ZP_11170581.1| GTP-binding protein [Alcanivorax hongdengensis A-11-3]
gi|407767234|gb|EKF75672.1| GTP-binding protein [Alcanivorax hongdengensis A-11-3]
Length = 466
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/430 (43%), Positives = 284/430 (66%), Gaps = 24/430 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+G +G + ++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGDGRLGDYPYTVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + GI MT Q+ A E+D+I+F+VDGR GL D+ I + LRK +P LV+NK
Sbjct: 61 G-ESEDGIDAPMTSQSLLAAGEADVILFMVDGRAGLTAADEQIASELRKLPKPTYLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ +++ ++ +FY LG+ + I+A +G G+++ +E ++ + F ++
Sbjct: 120 TDGVDADAAMAEFYALGLTDVMPIAAAHGRGVRSMIETVM------------EGFPDLQP 167
Query: 180 IEY----------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
++ I++A++G+PNVGKSTL+N +LGE+RV+ +D GTTRD+I+ FE +
Sbjct: 168 LDDDQPQEDDEGRIRIAVLGRPNVGKSTLVNRMLGEDRVVVFDHAGTTRDAIEVPFERDG 227
Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
K Y LIDTAG+RRR K FE++EKFSVIK L+++ A VV+L++DA++ I+ QD+++ +I
Sbjct: 228 KPYTLIDTAGVRRRGKVFEMVEKFSVIKALQAMEAAQVVVLVIDAREGITDQDLHLLGYI 287
Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
+SGR+L++ VNKWD + + ++ ++ + ++L F + FISA+ + +
Sbjct: 288 LDSGRALMIAVNKWDGLEADHKERVRAEMGRRLEFAPWVKIKFISALHGTGVGDLWAMVE 347
Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
+DS+ I +S++ +TR + + HPP R R KLRYAH GG NPP IV+HGNR
Sbjct: 348 KAWDSAFIRVSSNEMTRIMEAICAGHPPPRNGRFRAKLRYAHLGGNNPPTIVLHGNRTDS 407
Query: 410 IGNDYKRYLE 419
+ YKRYLE
Sbjct: 408 LPASYKRYLE 417
>gi|27363891|ref|NP_759419.1| GTP-binding protein Der [Vibrio vulnificus CMCP6]
gi|31340067|sp|Q8DF02.1|DER_VIBVU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|27360008|gb|AAO08946.1| GTP-binding protein EngA [Vibrio vulnificus CMCP6]
Length = 496
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 293/447 (65%), Gaps = 33/447 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKVGEHDFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK + +LV+NK
Sbjct: 61 DGS-EEGVETKMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKIEKATMLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
+ I++ + S DF++LG+ + I+A +G G+ +E L P+
Sbjct: 120 VDGIDADAASADFWQLGVDEMYQIAAAHGRGVTALIERALD---PFFDNLLSANNEGEIE 176
Query: 166 ------KKFFKKKEFTNIHSIEY--------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
+ +++E++ + E IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 177 DLTDMEDEDAEQQEYSEEDAEESLKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVY 236
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+RRR K E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGKVHETVEKFSVVKTLKAVEDANVVLLV 296
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +
Sbjct: 297 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 356
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + ES+ Y S+ + TS +TR + A ++H P + R KL+YAH
Sbjct: 357 FISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAH 416
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN+++ + + YKRYL
Sbjct: 417 AGGYNPPIVVIHGNQVRELPDSYKRYL 443
>gi|161986480|ref|YP_311456.2| GTP-binding protein EngA [Shigella sonnei Ss046]
gi|383179521|ref|YP_005457526.1| GTP-binding protein Der [Shigella sonnei 53G]
gi|414577232|ref|ZP_11434411.1| GTPase Der [Shigella sonnei 3233-85]
gi|415844089|ref|ZP_11523893.1| small GTP-binding domain protein [Shigella sonnei 53G]
gi|418267007|ref|ZP_12886450.1| small GTP-binding domain protein [Shigella sonnei str. Moseley]
gi|420359711|ref|ZP_14860681.1| GTPase Der [Shigella sonnei 3226-85]
gi|420363965|ref|ZP_14864848.1| small GTP-binding domain protein [Shigella sonnei 4822-66]
gi|323169045|gb|EFZ54722.1| small GTP-binding domain protein [Shigella sonnei 53G]
gi|391281281|gb|EIQ39933.1| GTPase Der [Shigella sonnei 3226-85]
gi|391283874|gb|EIQ42483.1| GTPase Der [Shigella sonnei 3233-85]
gi|391293628|gb|EIQ51887.1| small GTP-binding domain protein [Shigella sonnei 4822-66]
gi|397899124|gb|EJL15500.1| small GTP-binding domain protein [Shigella sonnei str. Moseley]
Length = 490
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/443 (45%), Positives = 287/443 (64%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE +L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLERVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I + NVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDTNVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|261252182|ref|ZP_05944755.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417955681|ref|ZP_12598690.1| GTP-binding protein Der [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260935573|gb|EEX91562.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342812335|gb|EGU47339.1| GTP-binding protein Der [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 495
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/446 (44%), Positives = 295/446 (66%), Gaps = 32/446 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D I+N LRK +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDIAISNHLRKIEKPSMLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
+ I++ + S DF++LG+ N + I+A +G G+ ++ L P+ + ++
Sbjct: 120 VDGIDADAASADFWQLGVENMYQIAAAHGRGVGALIDRALN---PFAEKMAEEAKGEIED 176
Query: 173 --EFTNI--HSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
EF ++ ++Y IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 LTEFEDLDEEKLDYTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 236
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVVKTLKAVEDANVVLLVI 296
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +F
Sbjct: 297 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHF 356
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 357 ISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPLVRGRRVKLKYAHA 416
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++ + + YKRYL
Sbjct: 417 GGYNPPIVVIHGNQVNELPDSYKRYL 442
>gi|161950068|ref|YP_404245.2| GTP-binding protein EngA [Shigella dysenteriae Sd197]
gi|309784738|ref|ZP_07679371.1| small GTP-binding domain protein [Shigella dysenteriae 1617]
gi|308927108|gb|EFP72582.1| small GTP-binding domain protein [Shigella dysenteriae 1617]
Length = 490
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 355
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A++++ P + R KL+YAH GG
Sbjct: 356 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDYQPPLVRGRRVKLKYAHAGGY 415
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 416 NPPIVVIHGNQVKDLPDSYKRYL 438
>gi|312884308|ref|ZP_07744017.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368081|gb|EFP95624.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122]
Length = 495
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/446 (43%), Positives = 291/446 (65%), Gaps = 32/446 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D I+N LRK +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPADIAISNHLRKLAKPSMLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ I++ + S DF++LG+ + + I+A +G G+ ++ L P+ + +E I
Sbjct: 120 VDGIDADAASADFWQLGVDDMYQIAAAHGRGVGALIDRALN---PFAEEMIAQEQGVIED 176
Query: 180 I---------------------------EYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
+ + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 LTDFVDQDEEVLEYTEEEAEQEFQRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 236
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK+I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVVKTLKAIEDANVVLLVI 296
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +F
Sbjct: 297 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDMDVKEHVKKELDRRLGFVDFARLHF 356
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 357 ISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHA 416
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPP++VIHGN++ + + YKRYL
Sbjct: 417 GGYNPPLVVIHGNQVNELPDSYKRYL 442
>gi|73856514|gb|AAZ89221.1| putative GTP-binding factor [Shigella sonnei Ss046]
Length = 503
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/443 (45%), Positives = 287/443 (64%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 14 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 74 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE +L LP+ + +E +
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLERVL---LPWMEDLAPQEEVD-ED 188
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I + NVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDTNVVMLVIDAR 308
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGY 428
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYL 451
>gi|343501753|ref|ZP_08739622.1| GTP-binding protein Der [Vibrio tubiashii ATCC 19109]
gi|418481164|ref|ZP_13050212.1| GTP-binding protein Der [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342816878|gb|EGU51770.1| GTP-binding protein Der [Vibrio tubiashii ATCC 19109]
gi|384571116|gb|EIF01654.1| GTP-binding protein Der [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 495
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/444 (44%), Positives = 294/444 (66%), Gaps = 28/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D I+N LRK +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDIAISNHLRKIEKPSMLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL-------------TIE---- 162
+ I++ + S DF++LG+ N + I+A +G G+ ++ L IE
Sbjct: 120 VDGIDADAASADFWQLGVENMYQIAAAHGRGVGALIDRALNPFAEKMAEEAQGEIEDLTE 179
Query: 163 --------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
L Y + ++EF + + IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 FVDEEEEKLDYTEEEAEEEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 238
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++DA
Sbjct: 239 GTTRDSIYIPMERDGREYVLIDTAGVRRRKRINETVEKFSVVKTLKAVEDANVVLLVIDA 298
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +FIS
Sbjct: 299 RENISDQDLSLLGFALNAGRSIVLAVNKWDGLDMDVKEHVKKELDRRLGFVDFARIHFIS 358
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH GG
Sbjct: 359 ALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPLVRGRRVKLKYAHAGG 418
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++ + + YKRYL
Sbjct: 419 YNPPIVVIHGNQVNELPDSYKRYL 442
>gi|256823051|ref|YP_003147014.1| small GTP-binding protein [Kangiella koreensis DSM 16069]
gi|256796590|gb|ACV27246.1| small GTP-binding protein [Kangiella koreensis DSM 16069]
Length = 467
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/419 (45%), Positives = 285/419 (68%), Gaps = 4/419 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVAN PGLTRDR YG+ + + FI++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTKSRDALVANLPGLTRDRQYGQATLKGQKFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M Q+ AI E++I++F+VD R G+ D+ + + LR+ +PI++++NK
Sbjct: 61 AGD-EEGIDGLMAGQSLLAITEANIVLFLVDARTGMTAADEFVADHLRRQNKPIIVLVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ I++ +L D+Y LG ++A +G G+ ++ I EL + + + +
Sbjct: 120 VDGIHADAALSDYYSLGYQTVLPLAAAHGRGVNTLVDTIFD-EL-HLESNDEDQLIGYEK 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +K+AIVG+PNVGKSTL+N LGE RV+ YD PGTTRDSI E +KKY LIDTAG
Sbjct: 178 AQGLKLAIVGRPNVGKSTLVNRFLGEERVVVYDLPGTTRDSIYIEMERRDKKYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E +EKFSV+KTL++I ++NV I+++DA++ I+ QD+++ ++I +SGRS+++
Sbjct: 238 VRRRGKVKETVEKFSVLKTLQAIDDSNVSIMVMDAREPITDQDLSLISYIIDSGRSMVIA 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + QR +K+ I ++L F+ FA +FISA+ +N+ ES++ + S+ + +
Sbjct: 298 INKWDGMTEEQRDTVKHEIDRRLGFIDFARIHFISALHGSNVGHLWESVDEAWASAQVEM 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
S S++TR L A + H P + R KLRYAH GG NPP+IVIHGN+ + YKR+L
Sbjct: 358 SASKLTRLLEEASEKHQPPTVRGRRVKLRYAHPGGHNPPLIVIHGNQCSKLPESYKRFL 416
>gi|81242044|gb|ABB62754.1| putative GTP-binding factor [Shigella dysenteriae Sd197]
Length = 503
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/443 (45%), Positives = 289/443 (65%), Gaps = 30/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 14 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 74 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 132
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 133 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ YDSS + TS +TR + A++++ P + R KL+YAH GG
Sbjct: 369 LHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDYQPPLVRGRRVKLKYAHAGGY 428
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 429 NPPIVVIHGNQVKDLPDSYKRYL 451
>gi|407790351|ref|ZP_11137446.1| GTP-binding protein Der [Gallaecimonas xiamenensis 3-C-1]
gi|407204973|gb|EKE74952.1| GTP-binding protein Der [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/443 (44%), Positives = 284/443 (64%), Gaps = 26/443 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTNSRDALVA+YPGLTRDR YG+ G+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNSRDALVADYPGLTRDRKYGQARYGEYDFILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + +KGI M KQ+ A+ E+D+++ +VD R GL D I +R+ G+P+ LV NK
Sbjct: 61 EGD-EKGIDAAMAKQSLLAMEEADVVMLLVDARDGLTAADDAIARHIRQLGKPVFLVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL---TIELPYKKFFKKKEFTN 176
+ I++ S +F+ L +G I+A +G G+ L+N L EL + + +
Sbjct: 120 VDGIDADSACAEFWGLSLGEVWQIAAAHGRGVTQLLDNALIPVVAELAQAEDEASEALAD 179
Query: 177 IHSIEYI---------------------KVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
+ E I K+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 VLGQELIDVDAIEDEEEAEAIPYADLPVKIAIVGRPNVGKSTLTNRILGEERVVVYDMPG 239
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDS+ E +K YILIDTAG+RRR + + +EKFSV+KTL++I +ANVV+L +DA+
Sbjct: 240 TTRDSVYIPMERGDKHYILIDTAGVRRRGRIDDAVEKFSVVKTLQAIEDANVVLLTMDAR 299
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ +S QD+N+ + +GR+L++ VNKWD + + R+ IK + ++L F+ FA +FISA
Sbjct: 300 EGLSDQDLNLLGHVLNAGRALVLVVNKWDGLSQDDREEIKRELDRRLGFIDFARLHFISA 359
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES++ + S+ +STS++TR L A +H P R KL+YAH GG
Sbjct: 360 LHGSGVGNLFESVDEAFASATQRVSTSKLTRILQMAQDDHQPPLVSGRRVKLKYAHAGGY 419
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPP I++HGN+++ + N YKRYL
Sbjct: 420 NPPRIIVHGNQVEKLPNSYKRYL 442
>gi|254283197|ref|ZP_04958165.1| GTP-binding protein EngA [gamma proteobacterium NOR51-B]
gi|219679400|gb|EED35749.1| GTP-binding protein EngA [gamma proteobacterium NOR51-B]
Length = 472
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/420 (45%), Positives = 281/420 (66%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN+LT +RDALVAN GLTRDR YG+G +G +I+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNQLTRTRDALVANLSGLTRDRQYGDGKVGAVPYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + GI M Q++ AI E+DI++ +VDGR G+ D+ + ++LR+ +P LVINK
Sbjct: 61 SGD-ESGIDAAMAGQSQTAIEEADIVLLMVDGRAGIQAGDEALVSYLRRKSKPFHLVINK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + +L DFY GI H I+A + GI + ++++L+ Y + + E ++
Sbjct: 120 IDGVGEEAALSDFYGFGIDGMHAIAASHNRGISSMMQSVLS---DYSQGDESLERSD--- 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I+VA +G+PNVGKSTLIN LLG++RV+ +D PGTTRDSI FE + Y LIDTAG
Sbjct: 174 -GGIRVAAIGRPNVGKSTLINRLLGDDRVVVFDEPGTTRDSIYIDFERRGQAYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E +EKFS++KTLK+I +A+VVILL+DA + + QD+++ ++GR L++
Sbjct: 233 VRRRKNVRETVEKFSIVKTLKAIADAHVVILLMDAHEGVVEQDLHLLGQCIDAGRGLVIA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + ++R I++ ++++L F+ +A +FISA+ + ES+ Y ++I L
Sbjct: 293 VNKWDGVDPDERDWIRSELQRRLQFVDYADIHFISALHGTGVGHLYESVGRAYSAAIKSL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+R+TR L A+ HPP R KLRYAH GG+NPP+IVIHG + + + + Y RYLE
Sbjct: 353 STNRLTRILEDAVSTHPPPMVNGRRIKLRYAHAGGQNPPLIVIHGTQTEALPSSYSRYLE 412
>gi|416249821|ref|ZP_11636918.1| GTP-binding protein EngA [Moraxella catarrhalis CO72]
gi|326575993|gb|EGE25916.1| GTP-binding protein EngA [Moraxella catarrhalis CO72]
Length = 472
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/422 (45%), Positives = 286/422 (67%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+KPV+ L+GRPNVGKSTLFN+LT SR ALVA+ GLTRDR YG+ + KSFI++DTGG
Sbjct: 3 IKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAGLTRDRQYGDAHFENKSFIVVDTGGI 62
Query: 61 EPEVKKG---IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
E+ G I M Q+ AI E+DI++F+VD R GL+ D I +FL G+P+ LV
Sbjct: 63 G-EMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLGKPVFLV 121
Query: 118 INKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
NK + ++ + +F+ LG G P+ +A +G G+ N LE+ LT ++P + K E +
Sbjct: 122 ANKMDGVHEAAYAEFFALGFGEPYATAASHGRGVTNLLES-LTADMP--EDMPKDELDS- 177
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ +K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE + Y+LIDT
Sbjct: 178 ---KTLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPFEREGRSYVLIDT 234
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR + E +EKFSV+KTL++I +ANVV++++DA++ I QD+++ + ++GR+++
Sbjct: 235 AGVRRRGRIDEKVEKFSVVKTLQAIKDANVVMVVIDAKEGIVDQDLHMLGYALDAGRAIV 294
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V +NKWD + +Q+ +K I ++ NF+ + + ISA+ N + SI+ Y++S+
Sbjct: 295 VAINKWDGLSQDQKDFVKIEIDRRFNFVPWVKIHLISALYGNGVGKLYPSIHKAYEASMF 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST+++TR L A+ +HPP R KLRYAH GG NPP+IVIHGN+ + Y+RY
Sbjct: 355 KVSTNQLTRILEDAVASHPPPMVGGRRIKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|329897033|ref|ZP_08271805.1| GTP-binding protein EngA [gamma proteobacterium IMCC3088]
gi|328921473|gb|EGG28859.1| GTP-binding protein EngA [gamma proteobacterium IMCC3088]
Length = 463
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/420 (46%), Positives = 282/420 (67%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN+LT SRDALVA++ GLTRDR YGEG +G++ +++IDTGG
Sbjct: 1 MKPVIALMGRPNVGKSTLFNQLTRSRDALVADFSGLTRDRKYGEGKVGERPYVVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + GI M +Q+ A E+DI++ I+D R GL D+ + + LR+ P +V+NK
Sbjct: 61 TGD-ENGIDLPMAQQSMAAADEADIVLLILDARAGLTGVDQELVSLLRRQSIPFHVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +NS ++ DFY LGI + I+A + G+++ +E +L F + E T
Sbjct: 120 IDGMNSDTAMGDFYSLGIDPLYRIAASHNRGVRSMIEEVLAP-------FPEDEITAEEQ 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAIVG+PNVGKSTL+N +LGE RV+ YD PGTTRDS+ FE ++Y LIDTAG
Sbjct: 173 AHGIKVAIVGRPNVGKSTLVNRMLGEERVVVYDHPGTTRDSVYIDFEREGEQYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E +EKFS++KTLK+I ++NVV+LL+DA + I QD+++ E+GR+L+V
Sbjct: 233 VRRRKNVKESVEKFSIVKTLKAIDDSNVVLLLMDAHEGIVDQDMHLLGHCIEAGRALVVV 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + Q+ IK++I ++L F+ FA +FISA+ + + ++I+ Y ++ L
Sbjct: 293 VNKWDGLDDYQKDRIKDSISRRLKFVEFAQMHFISALHGSGVGHLYQAIHTAYLAATQKL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+ +TR L A+ +HPP R KLRYAH GG+NPP IV+HGN+ + Y+RYLE
Sbjct: 353 STNYLTRILEGAVSDHPPPMVNGRRIKLRYAHAGGQNPPRIVVHGNQTTKVPASYERYLE 412
>gi|410618492|ref|ZP_11329437.1| GTP-binding protein [Glaciecola polaris LMG 21857]
gi|410162034|dbj|GAC33575.1| GTP-binding protein [Glaciecola polaris LMG 21857]
Length = 482
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/434 (45%), Positives = 283/434 (65%), Gaps = 20/434 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ +KGI M +Q+ AI E+D+++F+VD R GL D+ I LRK + + +V NK
Sbjct: 61 SGD-EKGIDVAMAQQSLMAIDEADVVLFLVDARAGLTAADQGIAEHLRKQNKSVYVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ I+ S S DF+ LG+G+ I+A +G G+ L + L +P + F +
Sbjct: 120 VDGIDGDSESADFFALGLGDVSQIAAAHGRGVTQLLTHTL---MPLSEQFPDMQVPEDEG 176
Query: 180 IEY---------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
++ IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDS+
Sbjct: 177 VDQELDAEKQLEKLLASPIKLAIVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSVFIP 236
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
E + ++Y+LIDTAG+RRR E +EKFS++KTL++I EANVV+L++DAQ+ ++ QD++
Sbjct: 237 MERDGREYVLIDTAGVRRRRNISEAVEKFSIVKTLQAIEEANVVLLIIDAQEGVTDQDLS 296
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ SGRSL+V VNKWD + + ++ IK + ++L F+ FA +FISA+ N+
Sbjct: 297 LLGFVLNSGRSLVVAVNKWDGLAKDVKEEIKRELDRRLGFIDFARLHFISALHGTNVGHL 356
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
ES+ Y+S+ ++TS +TR + A +H P + R K++YAH GG NPPIIVIHG
Sbjct: 357 FESVQEAYNSATKRINTSMLTRIMDMAQADHQPPVVRGRRVKMKYAHAGGYNPPIIVIHG 416
Query: 405 NRLKYIGNDYKRYL 418
N++K + + YKRY+
Sbjct: 417 NQVKDLPDSYKRYM 430
>gi|323491635|ref|ZP_08096814.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546]
gi|323314211|gb|EGA67296.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546]
Length = 494
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/443 (44%), Positives = 295/443 (66%), Gaps = 27/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I + LRK +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIASHLRKIEKPSMLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKN--------FLENILT-----IE---- 162
+ I++ + S +F++LG+ N + I+A +G G+ F E ++ IE
Sbjct: 120 VDGIDADAASAEFWQLGVENMYQIAAAHGRGVTALIDLALNPFAEKLMEETSGEIEDLTD 179
Query: 163 -------LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
L Y + ++EF + + IK+AI+G+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 FIDEDEKLDYSEEEAEEEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG 238
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++DA+
Sbjct: 239 TTRDSIYIPMERDGREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVMLVIDAR 298
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +FISA
Sbjct: 299 ENISDQDLSLLGFALNAGRSIVIAVNKWDGLDMDVKEQVKKELDRRLGFVDFARIHFISA 358
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH GG
Sbjct: 359 LHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPLVRGRRVKLKYAHAGGY 418
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++ + + YKRYL
Sbjct: 419 NPPIVVIHGNQVNELPDSYKRYL 441
>gi|386815061|ref|ZP_10102279.1| GTP-binding protein engA [Thiothrix nivea DSM 5205]
gi|386419637|gb|EIJ33472.1| GTP-binding protein engA [Thiothrix nivea DSM 5205]
Length = 473
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/420 (47%), Positives = 279/420 (66%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPVL L+GRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G + +++IDTGG
Sbjct: 1 MKPVLALIGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGTGDHHGRGYMLIDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + GI M KQT+ AI ES I+F+VDGRQGL D+ I +R++G+P+ L++NK
Sbjct: 61 SGE-ETGIDEYMAKQTRAAIAESSAILFLVDGRQGLTAADEQIARDIRQTGKPVFLLVNK 119
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ S +FY LG +I+A G G+ + +++IL + ++
Sbjct: 120 IDGVDADQASAEFYALGFTEVFMIAASQGRGVTSMIDDILD-----HLGAEFEDEEEQED 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+A +G+PNVGKSTLIN +LGE RVI +D PGTTRDSI FE + +Y LIDTAG
Sbjct: 175 DGSIKIAFIGRPNVGKSTLINRILGEERVIAFDQPGTTRDSIFIPFERDGLRYTLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E IEKFS+IKTL +I A+VV++L+DA I+ QD ++ E+GR+LI+
Sbjct: 235 VRRRRSVDEAIEKFSIIKTLDAIQRAHVVVMLVDAHDAITDQDAHLLGLALEAGRALIIA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNF-LSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + ++R IK ++ KL F L FA FISA+ +N+ ++ YDS+++
Sbjct: 295 VNKWDGLESDERDWIKQQLEVKLPFVLDFAEVFFISALHGSNVGLLYAAVKRAYDSAMLK 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
++TSR+TR L A++ H P + R KLRYAHQGG NP ++IHGNR +Y+ + Y RYL
Sbjct: 355 VATSRLTRILEMAVQQHQPPLTRGQRIKLRYAHQGGSNPFRLIIHGNRTEYVPDSYTRYL 414
>gi|384085560|ref|ZP_09996735.1| GTP-binding protein Der [Acidithiobacillus thiooxidans ATCC 19377]
Length = 445
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/420 (45%), Positives = 282/420 (67%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M V+ LVGRPNVGKST FNRLT +R+ALVA++PGLTRDRHYG + +++IDTGGF
Sbjct: 1 MTAVIALVGRPNVGKSTFFNRLTRTREALVADFPGLTRDRHYGTAQFEGRQYLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE ++G++ M QT+ AI E+D I F+VD ++GL QD+ I LR+ G+PI LV+NK
Sbjct: 61 EPEEREGLVAAMAIQTRLAIQEADAICFLVDAKEGLSAQDEEIAMELRRGGKPIYLVVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + L +F+ LG+G P+ ISA +G+G++ LE + + +LP +E +
Sbjct: 121 MDAKGAVSELPEFHRLGLGMPYTISAAHGHGVETLLEAVFS-DLP------SEEIAQQDA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++A++G+PNVGKSTL+N++LGE RV+ +D PGTTRDSI+ +E + K Y++IDTAG
Sbjct: 174 GKGPRIAMLGRPNVGKSTLVNAMLGEKRVLVFDEPGTTRDSIRIPYERDGKPYVMIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + E +EK SV+KTL ++ EA+VV+L+LDA+ I+ QD ++ E GR ++V
Sbjct: 234 MRRRARVGEGLEKLSVLKTLGALREADVVLLVLDARVGIAEQDSHLVGVAVELGRPIVVV 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++RK +K ++++L+F+ +A ISA+ + +SI+ ++ S H
Sbjct: 294 INKWDGMSPHERKAVKQELERRLSFIQYAPVYTISALHGTGVGDLYKSIDRLWQDSRKHF 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST + RAL I+ H P R KLRY HQGG+NP +V HGN+L + YKRYLE
Sbjct: 354 STGELNRALGEIIETHQPPMVGGRRIKLRYCHQGGENPVTLVFHGNQLTRLPGSYKRYLE 413
>gi|307543972|ref|YP_003896451.1| GTP-binding protein EngA [Halomonas elongata DSM 2581]
gi|307215996|emb|CBV41266.1| GTP-binding protein EngA [Halomonas elongata DSM 2581]
Length = 467
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/419 (45%), Positives = 279/419 (66%), Gaps = 7/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G K++ +IDTGG
Sbjct: 1 MNPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGGKAYTVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ QAI E+DI++F+VDGR GL D+ I N LR + + LV+NK
Sbjct: 61 SGD-EEGIDAAMAEQSLQAIDEADIVLFMVDGRSGLNVADEAIANHLRVNQKKTWLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + S DF++LGIG P I+A +G + + +E +L P+ + + +
Sbjct: 120 TDGLEEHSAMADFWQLGIGEPRSIAAAHGRNVTSLIEEVLD---PFPE--RDPDIPADTG 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I + ++G+PNVGKSTL+N LLGE+RV+ +D GTTRD+I+ FE K Y+L+DTAG
Sbjct: 175 ASGIHIGVIGRPNVGKSTLVNRLLGEDRVVVFDEAGTTRDAIEIPFERRGKPYVLVDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR EV EKFS+IKTL++I E +V +++LDA+ + QD+++ +++ SGR+L++
Sbjct: 235 VRRRKNVREVAEKFSIIKTLEAIKECHVAVMVLDARSGLVEQDLHLLDYVLTSGRALVLA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + H ++ ++ IK++L F +A +FISA+ + SI ++S+ H
Sbjct: 295 VNKWDGLEHEAKEKMRAEIKRRLGFADYAELHFISALHGTAVGDLYPSIERAFESANSHW 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+R+T L A++ H P R KLR AHQGG NPPIIV+HGN+ + YKRYL
Sbjct: 355 STNRLTNILRDAVEQHQPPMIHGRRIKLRMAHQGGTNPPIIVVHGNQTDSLPEAYKRYL 413
>gi|54294416|ref|YP_126831.1| GTP-binding protein EngA [Legionella pneumophila str. Lens]
gi|81822385|sp|Q5WWG8.1|DER_LEGPL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|53754248|emb|CAH15725.1| hypothetical protein lpl1485 [Legionella pneumophila str. Lens]
Length = 462
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/425 (49%), Positives = 288/425 (67%), Gaps = 22/425 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG KSFII+DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+++ + M+KQ++ A+ E+++I+F+VDGR GL D+ I LRK + + LV+N
Sbjct: 61 GVDDIEVDTL--MSKQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKLNKKVHLVVN 118
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K++ IN I+ DF LGI + H ISA +G GI + LE IL P+ T +H
Sbjct: 119 KTDGINEDIACADFQSLGITDIHAISASHGGGISSLLEEILE---PF--------ITEMH 167
Query: 179 SI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
+ IK+A G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI F +K+Y+LI
Sbjct: 168 EATDDKAIKIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLI 227
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG+RR+++ E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+ FI ESG++
Sbjct: 228 DTAGVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKA 287
Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
L++ VNKWD + ++ IK+ + ++L+F +FA FISA+ + + + IN Y S+
Sbjct: 288 LVIAVNKWDGLEEEHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSA 347
Query: 356 IIHLSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
I ST ++TR L ISA K+ PPC R KLRYAH GG NPP+IVIHGN+L +
Sbjct: 348 IQSFSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPES 405
Query: 414 YKRYL 418
YKRYL
Sbjct: 406 YKRYL 410
>gi|340782115|ref|YP_004748722.1| GTP-binding protein EngA [Acidithiobacillus caldus SM-1]
gi|340556268|gb|AEK58022.1| GTP-binding protein EngA [Acidithiobacillus caldus SM-1]
Length = 447
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/420 (45%), Positives = 277/420 (65%), Gaps = 7/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M V+ LVGRPNVGKSTLFNRLT SR+ALVA+ PGLTRDRHYG G + F++IDTGGF
Sbjct: 1 MAAVIALVGRPNVGKSTLFNRLTRSREALVADLPGLTRDRHYGVAQHGTQRFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE ++G++ M QT+QAI E+D + F+VD ++GL QD+ I LR+SG+ + LV+NK
Sbjct: 61 EPEEREGLVAAMAAQTRQAIAEADAVCFLVDAKEGLSAQDEEIAAELRRSGKTVYLVVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + L +F+ LG+G P+ I+A +G+G++ L+ I + +E S
Sbjct: 121 MDVRGAVAELPEFHRLGLGMPYTIAASHGHGVETLLDAI------FADLAVPEEAAAELS 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++A++G+PNVGKSTL+N++LGE RVI YD PGTTRDSI+ +E + Y++IDTAG
Sbjct: 175 LSGPRIAVLGRPNVGKSTLVNAMLGEQRVIVYDAPGTTRDSIRIPYERAGRPYVMIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR + E +EK SV+KTL ++ EA+VV++LLDA+ ++ QD ++ E R +I+
Sbjct: 235 IRRRARVGEGLEKLSVLKTLAALKEADVVLMLLDARDGVTDQDAHLVGVAAELWRPMILL 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + R++ K +++ L FLS+A ISA+ + + SI+ ++ + H
Sbjct: 295 LNKWDGLDARARQMAKAALERHLGFLSYAPVYTISALHGSGVGDLYPSIDRLWRDARRHF 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+ + R L I++H P R KLRY HQGG+NP +V HGN+L + YKRYLE
Sbjct: 355 STAELNRVLAQIIESHQPPMVGGRRIKLRYCHQGGENPITLVFHGNQLNRLPGAYKRYLE 414
>gi|410641935|ref|ZP_11352454.1| GTP-binding protein [Glaciecola chathamensis S18K6]
gi|410138837|dbj|GAC10641.1| GTP-binding protein [Glaciecola chathamensis S18K6]
Length = 482
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/431 (46%), Positives = 284/431 (65%), Gaps = 14/431 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M Q+ AI E+D+++F+VD R GL D+ I LRK + + +V NK
Sbjct: 61 SGD-EQGIDMAMANQSLMAIDEADVVLFLVDARVGLTGADQGIAEHLRKQNKSVYVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENIL---TIELPYKKFFKKKEFTN 176
+ I+ S S DF+ LG+G+ + I+A +G G+ L + L + P + +++E T
Sbjct: 120 VDGIDGDSESADFFALGLGDVNQIAAAHGRGVTQLLTHTLMPLAEQFPDMQVPEEEEITQ 179
Query: 177 IHSIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY 227
E IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI E
Sbjct: 180 EQDAEKQLEKLLASPIKLAIVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSIFIPMER 239
Query: 228 NNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIAN 287
+ ++Y+LIDTAG+RRR E +EKFS++KTL++I EANVV+L++DAQ+ I+ QD+++
Sbjct: 240 DGREYVLIDTAGVRRRRSISEAVEKFSIVKTLQAIEEANVVLLVIDAQEGITDQDLSLLG 299
Query: 288 FIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMES 347
F+ SGRSL++ VNKWD + + + IK + ++L F+ FA +FISA+ N+ ES
Sbjct: 300 FVLNSGRSLVLAVNKWDGLDKDVKDEIKRELDRRLGFIDFARLHFISALHGTNVGHLFES 359
Query: 348 INHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRL 407
+ Y+S+ ++TS +TR + A +H P + R K++YAH GG NPPIIVIHGN++
Sbjct: 360 VQEAYNSATKRINTSMLTRIMDMAQADHQPPVVRGRRVKMKYAHAGGYNPPIIVIHGNQV 419
Query: 408 KYIGNDYKRYL 418
K + + YKRY+
Sbjct: 420 KDLPDSYKRYM 430
>gi|317049132|ref|YP_004116780.1| ribosome-associated GTPase EngA [Pantoea sp. At-9b]
gi|316950749|gb|ADU70224.1| ribosome-associated GTPase EngA [Pantoea sp. At-9b]
Length = 496
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/447 (44%), Positives = 286/447 (63%), Gaps = 33/447 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ + M +Q+ AI E+D+++F+VD R G++ D+ I N LR + LV NK
Sbjct: 61 D-GTEEGVENRMAEQSLLAIEEADVVLFLVDARAGVMPADQQIANHLRSRQKATFLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ + LDFY LG+G H I+A +G G+ + LE L LP+ E +
Sbjct: 120 TDGLDPEAAVLDFYALGLGEIHAIAASHGRGVTSLLETAL---LPWMDEVAPLEVSEEDE 176
Query: 180 IEY----------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
E IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NEAYWAALAAEENGEELEEEEEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E ++++YILIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDDREYILIDTAGVRKRGKITDTVEKFSVIKTLQAIEDANVVMLV 296
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA+ IS QD+++ FI SGRSL++ VNKWD + + +K + +L F+ FA +
Sbjct: 297 IDARAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKDEVKETLDFRLGFIDFARVH 356
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + + + ES+ YD S ++TS +TR + A ++H P + R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESVTEAYDCSTKRVNTSMLTRIMNMAAEDHQPPLVRGRRVKLKYAH 416
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++K + + YKRYL
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYL 443
>gi|332305588|ref|YP_004433439.1| ribosome-associated GTPase EngA [Glaciecola sp. 4H-3-7+YE-5]
gi|410646691|ref|ZP_11357141.1| GTP-binding protein [Glaciecola agarilytica NO2]
gi|332172917|gb|AEE22171.1| ribosome-associated GTPase EngA [Glaciecola sp. 4H-3-7+YE-5]
gi|410133863|dbj|GAC05540.1| GTP-binding protein [Glaciecola agarilytica NO2]
Length = 482
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/431 (46%), Positives = 284/431 (65%), Gaps = 14/431 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M Q+ AI E+D+++F+VD R GL D+ I LRK + + +V NK
Sbjct: 61 SGD-EQGIDMAMANQSLMAIDEADVVLFLVDARVGLTGADQGIAEHLRKQNKSVYVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENIL---TIELPYKKFFKKKEFTN 176
+ I+ S S DF+ LG+G+ + I+A +G G+ L + L + P + +++E T
Sbjct: 120 VDGIDGDSESADFFALGLGDVNQIAAAHGRGVTQLLTHTLMPLAEQFPDMQVPEEEEVTQ 179
Query: 177 IHSIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY 227
E IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI E
Sbjct: 180 EQDAEKQLEKLLASPIKLAIVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSIFIPMER 239
Query: 228 NNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIAN 287
+ ++Y+LIDTAG+RRR E +EKFS++KTL++I EANVV+L++DAQ+ I+ QD+++
Sbjct: 240 DGREYVLIDTAGVRRRRSISEAVEKFSIVKTLQAIEEANVVLLVIDAQEGITDQDLSLLG 299
Query: 288 FIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMES 347
F+ SGRSL++ VNKWD + + + IK + ++L F+ FA +FISA+ N+ ES
Sbjct: 300 FVLNSGRSLVLAVNKWDGLDKDVKDEIKRELDRRLGFIDFARLHFISALHGTNVGHLFES 359
Query: 348 INHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRL 407
+ Y+S+ ++TS +TR + A +H P + R K++YAH GG NPPIIVIHGN++
Sbjct: 360 VQEAYNSATKRINTSMLTRIMDMAQADHQPPVVRGRRVKMKYAHAGGYNPPIIVIHGNQV 419
Query: 408 KYIGNDYKRYL 418
K + + YKRY+
Sbjct: 420 KDLPDSYKRYM 430
>gi|397663982|ref|YP_006505520.1| GTPase involved in ribosome synthesis and maintenance [Legionella
pneumophila subsp. pneumophila]
gi|395127393|emb|CCD05585.1| GTPase involved in ribosome synthesis and maintenance [Legionella
pneumophila subsp. pneumophila]
Length = 462
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/422 (50%), Positives = 290/422 (68%), Gaps = 16/422 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG KSFII+DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+++ + M++Q++ A+ E+++I+F+VDGR GL D+ I LRK + + LV+N
Sbjct: 61 GVDDIEVDTL--MSRQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKLNKKVHLVVN 118
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K++ IN I+ DF LGI + H ISA +G GI + LE IL P+ + E T+
Sbjct: 119 KTDGINEDIACADFQSLGITDIHAISASHGGGISSLLEEILE---PFTT--ETHEATDDK 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+I K+A G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI F +K+Y+LIDTA
Sbjct: 174 AI---KIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLIDTA 230
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+++ E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+ FI ESG++L++
Sbjct: 231 GVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKALVI 290
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + + ++ IK+ + ++L+F +FA FISA+ + + + IN Y S+I
Sbjct: 291 AVNKWDGLEEDHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSAIQS 350
Query: 359 LSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
ST ++TR L ISA K+ PPC R KLRYAH GG NPP+IVIHGN+L + YKR
Sbjct: 351 FSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPESYKR 408
Query: 417 YL 418
YL
Sbjct: 409 YL 410
>gi|307610240|emb|CBW99801.1| hypothetical protein LPW_15641 [Legionella pneumophila 130b]
Length = 462
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/425 (49%), Positives = 288/425 (67%), Gaps = 22/425 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG KSFII+DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+++ + M++Q++ A+ E+++I+F+VDGR GL D+ I LRK + + LV+N
Sbjct: 61 GVDDIEVDTL--MSRQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKLNKKVHLVVN 118
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K++ IN I+ DF LGI + H ISA +G GI + LE IL P+ T +H
Sbjct: 119 KTDGINEDIACADFQSLGITDIHAISASHGGGISSLLEEILE---PF--------ITEMH 167
Query: 179 SI---EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
+ IK+A G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI F +K+Y+LI
Sbjct: 168 EATDDKAIKIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLI 227
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG+RR+++ E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+ FI ESG++
Sbjct: 228 DTAGVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKA 287
Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
L++ VNKWD + ++ IK+ + ++L+F +FA FISA+ + + + IN Y S+
Sbjct: 288 LVIAVNKWDGLEEEHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSA 347
Query: 356 IIHLSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
I ST ++TR L ISA K+ PPC R KLRYAH GG NPP+IVIHGN+L +
Sbjct: 348 IQSFSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPES 405
Query: 414 YKRYL 418
YKRYL
Sbjct: 406 YKRYL 410
>gi|54297453|ref|YP_123822.1| GTP-binding protein EngA [Legionella pneumophila str. Paris]
gi|148359075|ref|YP_001250282.1| GTP-binding protein EngA [Legionella pneumophila str. Corby]
gi|296107123|ref|YP_003618823.1| GTP-binding protein EngA [Legionella pneumophila 2300/99 Alcoy]
gi|81822576|sp|Q5X522.1|DER_LEGPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225822|sp|A5IC36.1|DER_LEGPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|53751238|emb|CAH12649.1| hypothetical protein lpp1498 [Legionella pneumophila str. Paris]
gi|148280848|gb|ABQ54936.1| GTP-binding protein EngA [Legionella pneumophila str. Corby]
gi|295649024|gb|ADG24871.1| GTP-binding protein EngA [Legionella pneumophila 2300/99 Alcoy]
Length = 462
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/422 (49%), Positives = 290/422 (68%), Gaps = 16/422 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG KSFII+DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+++ + M++Q++ A+ E+++I+F+VDGR GL D+ I LRK + + LV+N
Sbjct: 61 GVDDIEVDTL--MSRQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKLNKKVHLVVN 118
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K++ +N I+ DF LGI + H ISA +G GI + LE IL P+ + E T+
Sbjct: 119 KTDGMNEDIACADFQSLGITDVHAISASHGGGISSLLEEILE---PFTT--ETHEATDDK 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+I K+A G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI F +K+Y+LIDTA
Sbjct: 174 AI---KIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLIDTA 230
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+++ E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+ FI ESG++L++
Sbjct: 231 GVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKALVI 290
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + + ++ IK+ + ++L+F +FA FISA+ + + + IN Y S+I
Sbjct: 291 AVNKWDGLEEDHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSAIQS 350
Query: 359 LSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
ST ++TR L ISA K+ PPC R KLRYAH GG NPP+IVIHGN+L + YKR
Sbjct: 351 FSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPESYKR 408
Query: 417 YL 418
YL
Sbjct: 409 YL 410
>gi|257453876|ref|ZP_05619154.1| ribosome-associated GTPase EngA [Enhydrobacter aerosaccus SK60]
gi|257448803|gb|EEV23768.1| ribosome-associated GTPase EngA [Enhydrobacter aerosaccus SK60]
Length = 467
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/422 (45%), Positives = 285/422 (67%), Gaps = 12/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN+LT SR ALVA+ GLTRDR YG+ +KSFI+IDTGG
Sbjct: 1 MKPVVALIGRPNVGKSTLFNQLTRSRQALVADLAGLTRDRQYGDATFEEKSFIVIDTGGI 60
Query: 61 EPEVKKG---IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
EV +G I M+ Q+ AI E+DII+F+VD R G+ D++I L G+P+ L
Sbjct: 61 G-EVDEGDGTIDDYMSHQSHTAIHEADIIVFVVDSRAGITGADEVIAKQLHTLGKPVFLA 119
Query: 118 INKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
NK + ++ + +FY LG G P ++A +G G+ N LE + T +P ++E
Sbjct: 120 ANKMDGVHEAAIHEFYALGFGEPFPMAASHGRGVGNLLEAV-TANMPTDD---QEE---- 171
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ + +++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI +E +N+ Y+LIDT
Sbjct: 172 QAPDGLRIAIIGRPNVGKSTLVNRLLGEERVVVFDMPGTTRDSIYIPYERDNRHYVLIDT 231
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR + E +EKFSV+KTL++I +A+VVI+++DAQ+ I+ QD+N+ + E+GR+++
Sbjct: 232 AGVRRRGRIDEKVEKFSVVKTLQAIKDAHVVIVVIDAQEGITDQDLNLLGYALEAGRAMV 291
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ +NKWD + +Q+ +K + ++ NF+ + + ISA+ + + SI+ YD+++
Sbjct: 292 LAINKWDGLDQDQKNFVKIEMDRRFNFIPYVKVHLISALHGTGVGNLYPSIHRAYDAAMF 351
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+STSR+T+ L A+ H P R KLR+AH GG NPPIIVIHGN+ + N Y+RY
Sbjct: 352 DISTSRLTQILQDAVTAHQPPMVGGRRIKLRFAHLGGHNPPIIVIHGNQTSQVPNSYRRY 411
Query: 418 LE 419
LE
Sbjct: 412 LE 413
>gi|269962406|ref|ZP_06176756.1| GTP-binding protein [Vibrio harveyi 1DA3]
gi|424045074|ref|ZP_17782641.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-03]
gi|269832902|gb|EEZ87011.1| GTP-binding protein [Vibrio harveyi 1DA3]
gi|408886928|gb|EKM25578.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-03]
Length = 498
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 293/447 (65%), Gaps = 31/447 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAQQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
K + I++ + DF++LG+ + + I+A +G G+ LE L
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179
Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
EL + + ++ EF + + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAVEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++NIS QD+++ F +GRS+++ VNKWD + ++ ++ +K + ++L F+ FA +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNDVKENVKKELDRRLGFVDFARIH 358
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+V+HGN ++ + + YKRYL
Sbjct: 419 AGGYNPPIVVVHGNMVRDLPDSYKRYL 445
>gi|416225549|ref|ZP_11626897.1| GTP-binding protein EngA [Moraxella catarrhalis 103P14B1]
gi|416235991|ref|ZP_11630386.1| GTP-binding protein EngA [Moraxella catarrhalis 12P80B1]
gi|326560782|gb|EGE11149.1| GTP-binding protein EngA [Moraxella catarrhalis 103P14B1]
gi|326563523|gb|EGE13782.1| GTP-binding protein EngA [Moraxella catarrhalis 12P80B1]
Length = 472
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/422 (45%), Positives = 285/422 (67%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+KPV+ L+GRPNVGKSTLFN+LT SR ALVA+ GLTRDR YG+ + KSFI++DTGG
Sbjct: 3 IKPVVALIGRPNVGKSTLFNQLTKSRQALVADLAGLTRDRQYGDAHFENKSFIVVDTGGI 62
Query: 61 EPEVKKG---IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
E+ G I M Q+ AI E+DI++F+VD R GL+ D I +FL G+P+ LV
Sbjct: 63 G-EMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLGKPVFLV 121
Query: 118 INKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
NK + ++ + +F+ LG G P+ +A +G G+ N LE+ LT ++P + + E
Sbjct: 122 ANKMDGVHEAAYAEFFALGFGEPYATAASHGRGVTNLLES-LTADMP--EDMPEDELDG- 177
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ +K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE + Y+LIDT
Sbjct: 178 ---KALKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPFEREGRSYVLIDT 234
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR + E +EKFSV+KTL++I +ANVV++++DA++ I QD+++ + ++GR+++
Sbjct: 235 AGVRRRGRIDEKVEKFSVVKTLQAIKDANVVVVVIDAKEGIVDQDLHMLGYALDAGRAIV 294
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
V +NKWD + +Q+ +K I ++ NF+ + + ISA+ N + SI+ Y++S+
Sbjct: 295 VAINKWDGLSQDQKDSVKIEIDRRFNFVPWVKIHLISALYGNGVGKLYPSIHKAYEASMF 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST+++TR L A+ +HPP R KLRYAH GG NPP+IVIHGN+ + Y+RY
Sbjct: 355 KVSTNQLTRILEDAVASHPPPMVGGRRIKLRYAHLGGHNPPVIVIHGNQTSSLPKSYQRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|153833535|ref|ZP_01986202.1| GTP-binding protein EngA [Vibrio harveyi HY01]
gi|148870186|gb|EDL69127.1| GTP-binding protein EngA [Vibrio harveyi HY01]
Length = 498
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/448 (43%), Positives = 292/448 (65%), Gaps = 33/448 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL------------------- 159
K + I++ + DF++LG+ + + I+A +G G+ LE L
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179
Query: 160 ---------TIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVIT 210
T+E Y + + EF + + IK+AI+G+PNVGKSTL N +LGE RV+
Sbjct: 180 LTEFEDEELTVE-DYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVV 237
Query: 211 YDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVIL 270
YD PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L
Sbjct: 238 YDMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLL 297
Query: 271 LLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMF 330
++DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA
Sbjct: 298 VIDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARI 357
Query: 331 NFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYA 390
+FISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YA
Sbjct: 358 HFISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYA 417
Query: 391 HQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
H GG NPPI+V+HGN ++ + + YKRYL
Sbjct: 418 HAGGYNPPIVVVHGNMVRDLPDSYKRYL 445
>gi|410612521|ref|ZP_11323598.1| GTP-binding protein [Glaciecola psychrophila 170]
gi|410167862|dbj|GAC37487.1| GTP-binding protein [Glaciecola psychrophila 170]
Length = 483
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/433 (45%), Positives = 286/433 (66%), Gaps = 17/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKYEGLQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AIIE+D+++F+VD R G+ D+ I LR+ +P+ +V NK
Sbjct: 61 SGD-EQGIDVVMAEQSLLAIIEADVVLFLVDARTGMTAADQGIAEHLRRQEKPVYVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILT---IELP-----------Y 165
+ I+ S S DF+ LG+G + I+A +G G+ L+N L E P
Sbjct: 120 VDGIDGDSESADFFALGLGGVNQIAAAHGRGVTQLLQNALAPIASEFPDMHIPEESDEAL 179
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
++ ++ + ++ IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 180 EEIDADEQLARLQALP-IKLAIVGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIFIPM 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E ++++YILIDTAG+RRR E +EKFS++KTL++I E+NVV+ ++DAQ+ I+ QD+++
Sbjct: 239 ERDDREYILIDTAGVRRRRNISEAVEKFSIVKTLQAIEESNVVLFVVDAQEGITDQDLSL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
FI +GRSL+V VNKWD + ++ IK + ++L F+ FA +FISA+ +
Sbjct: 299 LGFILNAGRSLVVAVNKWDGLDKTVKEDIKRELDRRLGFIDFARLHFISALHGTGVGHLF 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
ES+ Y S+ ++TS +TR + A ++H P + R K++YAH GG NPP+IVIHGN
Sbjct: 359 ESVQEAYASATKRVNTSMLTRIMDMAQEDHQPPVVRGRRVKMKYAHAGGYNPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYL 418
+LK + + YKRYL
Sbjct: 419 QLKDLPDSYKRYL 431
>gi|410633389|ref|ZP_11344035.1| GTP-binding protein [Glaciecola arctica BSs20135]
gi|410147104|dbj|GAC20902.1| GTP-binding protein [Glaciecola arctica BSs20135]
Length = 483
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/433 (45%), Positives = 288/433 (66%), Gaps = 17/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGTAKYEGLQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AIIE+D+++F+VD R G+ D+ I LRK +P+ +V NK
Sbjct: 61 SGD-EQGIDVVMAEQSLLAIIEADVVLFLVDARTGMTAADQGIAEHLRKQEKPVYVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILT--------IELP------Y 165
+ I+ S S DF+ LG+G+ + I+A +G G+ L++ L + +P
Sbjct: 120 VDGIDGDSESADFFALGLGDVNQIAAAHGRGVTQLLQSALAPIAEQFPDMHIPEESDEEL 179
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
++ ++ N+ ++ IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 180 QEIDADEQLANLQALP-IKLAIVGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIFIPM 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E + ++YILIDTAG+RRR E IEKFS++KTL++I E+NVV+ ++DAQ+ I+ QD+++
Sbjct: 239 ERDGREYILIDTAGVRRRRNISEAIEKFSIVKTLQAIEESNVVLFVVDAQEGITDQDLSL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
FI +GRSL+V VNKWD + + ++ IK + ++L F+ FA +FISA+ +
Sbjct: 299 LGFILNAGRSLVVAVNKWDGLNKDVKEEIKRELDRRLGFIDFARLHFISALHGTGVGHLF 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
ES+ Y S+ ++TS +TR + A ++H P + R K++YAH GG NPP+IVIHGN
Sbjct: 359 ESVQEAYASATKRVNTSMLTRIMDMAQEDHQPPVVRGRRVKMKYAHAGGYNPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYL 418
+LK + + YKRYL
Sbjct: 419 QLKDLPDSYKRYL 431
>gi|397667163|ref|YP_006508700.1| GTPase involved in ribosome synthesis and maintenance [Legionella
pneumophila subsp. pneumophila]
gi|395130574|emb|CCD08819.1| GTPase involved in ribosome synthesis and maintenance [Legionella
pneumophila subsp. pneumophila]
Length = 462
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/422 (49%), Positives = 290/422 (68%), Gaps = 16/422 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG KSFII+DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQYENKSFIIVDTGGI 60
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+++ + M++Q++ A+ E+++I+F+VDGR GL D+ I LRK + + LV+N
Sbjct: 61 GVDDIEVDTL--MSRQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKLNKKVHLVVN 118
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K++ +N I+ DF LGI + H ISA +G GI + LE IL P+ + E T+
Sbjct: 119 KTDGMNEDIACADFQSLGITDIHAISASHGGGISSLLEEILE---PFTT--ETHEATDDK 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+I K+A G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI F +K+Y+LIDTA
Sbjct: 174 AI---KIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLIDTA 230
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+++ E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+ FI ESG++L++
Sbjct: 231 GVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKALVI 290
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + + ++ IK+ + ++L+F +FA FISA+ + + + IN Y S+I
Sbjct: 291 AVNKWDGLEEDHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSAIQS 350
Query: 359 LSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
ST ++TR L ISA K+ PPC R KLRYAH GG NPP+IVIHGN+L + YKR
Sbjct: 351 FSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPESYKR 408
Query: 417 YL 418
YL
Sbjct: 409 YL 410
>gi|421464672|ref|ZP_15913362.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens
WC-A-157]
gi|400205425|gb|EJO36406.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens
WC-A-157]
Length = 469
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/420 (45%), Positives = 289/420 (68%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E ++GI M +Q+K AI E+D+IIF+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 -GESEQGIDSYMAEQSKTAIHEADLIIFVVDARAGLLASDEQIARELRTLGKKVFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ ++ +FY+LG+G P ++A +G G+ LE +L ++P + ++E
Sbjct: 120 VDGVHAEAAVVEFYKLGLGEPMHVAASHGRGVAQMLEEVLA-DVPEDE--NREEHDKATG 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AI+G+PNVGKSTL+N LLGE RV+ YD PGTTRDS+ FE + ++Y LIDTAG
Sbjct: 177 L---RLAIIGRPNVGKSTLVNRLLGEERVVAYDEPGTTRDSVYIPFERDGRQYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E+IEKFSV+KTL+++ +A+VV+++LDA++ + QD+++ + E+GR++++
Sbjct: 234 VRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVLDAREGVVEQDLHLIGYALEAGRAMVIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ RK K ++ ++ +F+ +A + ISA+ + SI+ YDSS + +
Sbjct: 294 INKWDNMSEYDRKQCKLDVDRRFDFIPWARIHLISALHGTGVGDLYPSIHRAYDSSHLKV 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYLE
Sbjct: 354 SPAKLTQILNDATEAHQPPMVGGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413
>gi|418041593|ref|ZP_12679812.1| ribosome-associated GTPase EngA [Escherichia coli W26]
gi|424129285|ref|ZP_17862201.1| ribosome-associated GTPase EngA [Escherichia coli PA9]
gi|424142124|ref|ZP_17874020.1| ribosome-associated GTPase EngA [Escherichia coli PA14]
gi|424576622|ref|ZP_18016706.1| ribosome-associated GTPase EngA [Escherichia coli EC1845]
gi|425145201|ref|ZP_18545203.1| ribosome-associated GTPase EngA [Escherichia coli 10.0869]
gi|425157173|ref|ZP_18556446.1| ribosome-associated GTPase EngA [Escherichia coli PA34]
gi|425187634|ref|ZP_18584917.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1997]
gi|428948180|ref|ZP_19020474.1| ribosome-associated GTPase EngA [Escherichia coli 88.1467]
gi|428972540|ref|ZP_19042891.1| ribosome-associated GTPase EngA [Escherichia coli 90.0039]
gi|444953882|ref|ZP_21271982.1| ribosome-associated GTPase EngA [Escherichia coli 99.0848]
gi|444970538|ref|ZP_21287905.1| ribosome-associated GTPase EngA [Escherichia coli 99.1793]
gi|445046306|ref|ZP_21361561.1| ribosome-associated GTPase EngA [Escherichia coli 3.4880]
gi|383475452|gb|EID67412.1| ribosome-associated GTPase EngA [Escherichia coli W26]
gi|390683364|gb|EIN59060.1| ribosome-associated GTPase EngA [Escherichia coli PA9]
gi|390700767|gb|EIN75048.1| ribosome-associated GTPase EngA [Escherichia coli PA14]
gi|390919977|gb|EIP78297.1| ribosome-associated GTPase EngA [Escherichia coli EC1845]
gi|408069878|gb|EKH04260.1| ribosome-associated GTPase EngA [Escherichia coli PA34]
gi|408103688|gb|EKH36018.1| ribosome-associated GTPase EngA [Escherichia coli FRIK1997]
gi|408590980|gb|EKK65432.1| ribosome-associated GTPase EngA [Escherichia coli 10.0869]
gi|427208152|gb|EKV78289.1| ribosome-associated GTPase EngA [Escherichia coli 88.1467]
gi|427227685|gb|EKV96216.1| ribosome-associated GTPase EngA [Escherichia coli 90.0039]
gi|444563073|gb|ELV40108.1| ribosome-associated GTPase EngA [Escherichia coli 99.0848]
gi|444578971|gb|ELV54992.1| ribosome-associated GTPase EngA [Escherichia coli 99.1793]
gi|444659365|gb|ELW31783.1| ribosome-associated GTPase EngA [Escherichia coli 3.4880]
Length = 487
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/440 (45%), Positives = 287/440 (65%), Gaps = 30/440 (6%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
++ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG +
Sbjct: 1 MVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGID-G 59
Query: 64 VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSEN 123
+ G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK++
Sbjct: 60 TEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDG 119
Query: 124 INSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY 182
++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E + EY
Sbjct: 120 LDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-EDAEY 175
Query: 183 ------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTR 218
IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTR
Sbjct: 176 WAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTR 235
Query: 219 DSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNI 278
DSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA++ I
Sbjct: 236 DSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGI 295
Query: 279 SAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKL 338
S QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA+
Sbjct: 296 SDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHG 355
Query: 339 NNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPP 398
+ + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG NPP
Sbjct: 356 SGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPP 415
Query: 399 IIVIHGNRLKYIGNDYKRYL 418
I+VIHGN++K + + YKRYL
Sbjct: 416 IVVIHGNQVKDLPDSYKRYL 435
>gi|52841771|ref|YP_095570.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|378777406|ref|YP_005185843.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|81823403|sp|Q5ZV99.1|DER_LEGPH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|52628882|gb|AAU27623.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|364508220|gb|AEW51744.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila
ATCC 43290]
Length = 462
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/422 (49%), Positives = 290/422 (68%), Gaps = 16/422 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNR+T ++DALVA++PGLTRDR YG KSFII+DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRITKTQDALVADFPGLTRDRQYGHAQHENKSFIIVDTGGI 60
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+++ + M++Q++ A+ E+++I+F+VDGR GL D+ I LRK + + LV+N
Sbjct: 61 GVDDIEVDTL--MSRQSQVALNEANVILFLVDGRSGLTGIDQQIAQALRKFNKKVHLVVN 118
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K++ +N I+ DF LGI + H ISA +G GI + LE IL P+ + E T+
Sbjct: 119 KTDGMNEDIACADFQSLGITDIHAISASHGGGISSLLEEILE---PFTT--ETHEATDDK 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+I K+A G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI F +K+Y+LIDTA
Sbjct: 174 AI---KIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSISIPFTREDKQYVLIDTA 230
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+++ E IEKFSVIKTL++I EA+V +LLLDA + I+ QD+N+ FI ESG++L++
Sbjct: 231 GVRRKSRIDEKIEKFSVIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGKALVI 290
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + + ++ IK+ + ++L+F +FA FISA+ + + + IN Y S+I
Sbjct: 291 AVNKWDGLEEDHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLFKDINEAYHSAIQS 350
Query: 359 LSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
ST ++TR L ISA K+ PPC R KLRYAH GG NPP+IVIHGN+L + YKR
Sbjct: 351 FSTPKLTRLLQDISA-KHTPPCINGR-RIKLRYAHLGGHNPPVIVIHGNQLDALPESYKR 408
Query: 417 YL 418
YL
Sbjct: 409 YL 410
>gi|388601634|ref|ZP_10160030.1| GTP-binding protein Der [Vibrio campbellii DS40M4]
Length = 498
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 293/447 (65%), Gaps = 31/447 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
K + I++ + DF++LG+ + + I+A +G G+ LE L
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179
Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
EL + + +++ EF + + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAVEDYTEEEAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+V+HGN ++ + + YKRYL
Sbjct: 419 AGGYNPPIVVVHGNMVRDLPDSYKRYL 445
>gi|255021269|ref|ZP_05293318.1| GTP-binding protein EngA [Acidithiobacillus caldus ATCC 51756]
gi|254969280|gb|EET26793.1| GTP-binding protein EngA [Acidithiobacillus caldus ATCC 51756]
Length = 447
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/420 (45%), Positives = 277/420 (65%), Gaps = 7/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M V+ LVGRPNVGKSTLFNRLT SR+ALVA+ PGLTRDRHYG G + F++IDTGGF
Sbjct: 1 MAAVIALVGRPNVGKSTLFNRLTRSREALVADLPGLTRDRHYGVAQHGTQRFLVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE ++G++ M QT+QAI E+D + F+VD ++GL QD+ I LR+SG+ + LV+NK
Sbjct: 61 EPEEREGLVAAMAAQTRQAIAEADAVCFLVDAKEGLSAQDEEIAAELRRSGKTVYLVVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + L +F+ LG+G P+ I+A +G+G++ L+ I + +E S
Sbjct: 121 MDVRGAVAELPEFHRLGLGMPYTIAASHGHGVETLLDAI------FADLAVPEEAAAELS 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++A++G+PNVGKSTL+N++LGE RVI YD PGTTRDSI+ +E + Y++IDTAG
Sbjct: 175 LSGPRIAVLGRPNVGKSTLVNAMLGEQRVIVYDAPGTTRDSIRIPYERAGRPYVMIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR + E +EK SV+KTL ++ EA+VV+++LDA+ ++ QD ++ E R +I+
Sbjct: 235 IRRRARVGEGLEKLSVLKTLAALKEADVVLMVLDARDGVTDQDAHLVGVAAELWRPMILL 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + R++ K +++ L FLS+A ISA+ + + SI+ ++ + H
Sbjct: 295 LNKWDGLDARARQMAKAALERHLGFLSYAPVYTISALHGSGVGDLYPSIDRLWRDARRHF 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+ + R L I++H P R KLRY HQGG+NP +V HGN+L + YKRYLE
Sbjct: 355 STAELNRVLAQIIESHQPPMVGGRRIKLRYCHQGGENPITLVFHGNQLNRLPGAYKRYLE 414
>gi|255321133|ref|ZP_05362299.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SK82]
gi|262380178|ref|ZP_06073333.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens
SH164]
gi|421855022|ref|ZP_16287404.1| GTPase Der [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
gi|255301687|gb|EET80938.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SK82]
gi|262298372|gb|EEY86286.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens
SH164]
gi|403189522|dbj|GAB73605.1| GTPase Der [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
Length = 469
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/420 (44%), Positives = 289/420 (68%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E ++GI M +Q+K AI E+D+IIF+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 -GESEQGIDSYMAEQSKTAIHEADLIIFVVDARAGLLASDEQIARELRTLGKKVFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ ++ +FY+LG+G P ++A +G G+ LE +L ++P + ++ +
Sbjct: 120 VDGVHAEAAVVEFYKLGLGEPMHVAASHGRGVAQMLEEVLA-DVPEDENPEEHDKAT--- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++AI+G+PNVGKSTL+N LLGE RV+ YD PGTTRDS+ FE + ++Y LIDTAG
Sbjct: 176 --GLRLAIIGRPNVGKSTLVNRLLGEERVVAYDEPGTTRDSVYIPFERDGRQYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E+IEKFSV+KTL+++ +A+VV+++LDA++ + QD+++ + E+GR++++
Sbjct: 234 VRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVLDAREGVVEQDLHLIGYALEAGRAMVIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ RK K ++ ++ +F+ +A + ISA+ + SI+ YDSS + +
Sbjct: 294 INKWDNMSEYDRKQCKLDVDRRFDFIPWARIHLISALHGTGVGDLYPSIHRAYDSSHLKV 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYLE
Sbjct: 354 SPAKLTQILNDATEAHQPPMVGGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413
>gi|148653556|ref|YP_001280649.1| GTP-binding protein EngA [Psychrobacter sp. PRwf-1]
gi|172048545|sp|A5WGA8.1|DER_PSYWF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|148572640|gb|ABQ94699.1| small GTP-binding protein [Psychrobacter sp. PRwf-1]
Length = 473
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 284/421 (67%), Gaps = 11/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKST+FN++T +R ALVA+ GLTRDR YG+ KSF++IDTGG
Sbjct: 3 MKPVVALIGRPNVGKSTIFNQMTKTRQALVADLSGLTRDRQYGDATYNNKSFVVIDTGGI 62
Query: 61 -EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
E + +G + + M+ Q+ AI E+DI++F+VD R G++ D I L G+P+ LV
Sbjct: 63 GEADDGRGSIDDYMSAQSHTAIHEADILVFVVDARAGMIGADAEIGKMLHTLGKPVYLVA 122
Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
NK + ++ + +FY LG+G P+ ++A +G GI N L++ LT ++P E
Sbjct: 123 NKIDGVHDAAPAEFYALGLGEPYPMTASHGRGIANLLDD-LTADMP--------EDVEEE 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+K+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE N K Y+LIDTA
Sbjct: 174 DQGGLKLAIIGRPNVGKSTLVNRMLGEERVVVYDMPGTTRDSIYIPFERNGKNYVLIDTA 233
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR + E +EKFSVIK L++I +ANVV+ ++DAQ+ I QD+++ + ++GR+++V
Sbjct: 234 GVRRRGRIDEKVEKFSVIKALQAIKDANVVVAVIDAQEGIVDQDLHMLGYALDAGRAMVV 293
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + +++++I+ + ++ NF+ + +FISA+ N+ + SI+ Y SS+
Sbjct: 294 AINKWDGLSEDKKEMIRIELDRRFNFIPYVKVHFISALHGTNVGNLYPSIHKAYASSMFK 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST+R+T+ L A+ +PP R KLRYAH GG NPPIIVIHGN+ + Y+RYL
Sbjct: 354 VSTNRLTQILEDAVAANPPPMSGGRRIKLRYAHLGGHNPPIIVIHGNQTGSLPKSYQRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|329297578|ref|ZP_08254914.1| GTP-binding protein Der [Plautia stali symbiont]
Length = 496
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/447 (44%), Positives = 286/447 (63%), Gaps = 33/447 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ + M +Q+ AI E+D+++F+VD R G++ D+ I N LR + V NK
Sbjct: 61 D-GTEEGVENRMAEQSLLAIEEADVVLFLVDARAGVMPADQQIANHLRSRDKATFFVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ + LDFY LG+G H I+A +G G+ + LE L LP+ +E +
Sbjct: 120 TDGLDPDAAVLDFYALGLGEIHPIAASHGRGVTSLLETAL---LPWMDDIAPREVSEEDE 176
Query: 180 IEY----------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
E IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NEAYWATLAAEENGEALEEEEEEAFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E ++++YILIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDDREYILIDTAGVRKRGKITDTVEKFSVIKTLQAIEDANVVMLV 296
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA+ IS QD+++ FI SGRSL++ VNKWD + + +K+ + +L F+ FA +
Sbjct: 297 IDARAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEIKDEVKDTLDFRLGFIDFARVH 356
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + + + ES+ YD S ++TS +TR + A +H P + R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESVTEAYDCSTKRVNTSMLTRIMNMAADDHQPPLVRGRRVKLKYAH 416
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++K + + YKRYL
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYL 443
>gi|90408609|ref|ZP_01216764.1| GTP-binding protein EngA [Psychromonas sp. CNPT3]
gi|90310301|gb|EAS38431.1| GTP-binding protein EngA [Psychromonas sp. CNPT3]
Length = 488
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/436 (45%), Positives = 285/436 (65%), Gaps = 19/436 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ + + FI+IDTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLDEDEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M Q+ AI E+D ++F+VD R GL+ D+ I + LRK + + +V NK
Sbjct: 61 TGD-EEGIDSLMAGQSLLAIDEADAVLFMVDARVGLMVADQAIADHLRKQEKKVFIVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFT-NIH 178
++ I++ S +FY LG+G + I+A +G G++ ++ L + + EF +
Sbjct: 120 TDGIDADSACAEFYALGLGEVYHIAAAHGKGVRKMIDTALDGFFDHSEDLDDAEFDLDPE 179
Query: 179 SIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIK 222
IE IK+AI+GKPNVGKSTLIN +LGE RV+ +D PGTTRDSI
Sbjct: 180 LIEDDEEKLLREQQRLADLPIKLAIIGKPNVGKSTLINRILGEERVVVFDQPGTTRDSIY 239
Query: 223 SLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQD 282
++++YILIDTAG+R+R K E +EKFSVIKTLK+I +ANVV+L++DA+ I+ QD
Sbjct: 240 IPMSRDDREYILIDTAGVRKRKKVNETVEKFSVIKTLKAIEDANVVLLVIDARDGIAEQD 299
Query: 283 INIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNIN 342
+ + + SGRSL++ VNKWD + ++ +K + ++L F+ FA +FISA+ +
Sbjct: 300 LCLLGYTLNSGRSLVIAVNKWDGMTDYDKERVKTELDRRLGFIDFAKIHFISALHGTGVG 359
Query: 343 SFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVI 402
ES+ YDSS +STS +TR + A+ +H P + R KLRYAH GG NPP+IVI
Sbjct: 360 HLYESVEEAYDSSTKRISTSMLTRIMTMAVDDHNPPMVQSRRVKLRYAHAGGYNPPLIVI 419
Query: 403 HGNRLKYIGNDYKRYL 418
HGN++K + + YKRYL
Sbjct: 420 HGNQVKKLPDSYKRYL 435
>gi|333369528|ref|ZP_08461640.1| ribosome-associated GTPase EngA [Psychrobacter sp. 1501(2011)]
gi|332970913|gb|EGK09889.1| ribosome-associated GTPase EngA [Psychrobacter sp. 1501(2011)]
Length = 473
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 284/421 (67%), Gaps = 11/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+KPV+ L+GRPNVGKST+FN++T +R ALVA+ GLTRDR YG+ KSF++IDTGG
Sbjct: 3 IKPVVALIGRPNVGKSTIFNQMTKTRQALVADLSGLTRDRQYGDATYNNKSFVVIDTGGI 62
Query: 61 --EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
+ + GI M+ Q+ AI E+DII+F+VD R G++ D I L G+P+ LV
Sbjct: 63 GEADDGRGGIDDYMSAQSHTAIHEADIIVFVVDARAGMIGADAEIGKMLHTLGKPVYLVA 122
Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
NK + ++ + +FY LG+G P+ ++A +G GI N L++ LT +P E
Sbjct: 123 NKIDGVHDAAPAEFYALGLGEPYPMTASHGRGIGNLLDD-LTENMP--------EDVEEE 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+K+AI+G+PNVGKSTL+N +LGE+RV+ YD PGTTRDSI +E N K Y+LIDTA
Sbjct: 174 DQGGLKLAIIGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSIYIPYERNGKNYVLIDTA 233
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR + E +EKFSV+KTL++I ++NVV+ ++DAQ+ I QD+++ + ++GR+++V
Sbjct: 234 GVRRRGRIDEKVEKFSVVKTLQAIKDSNVVVAVIDAQEGIVDQDLHMLGYALDAGRAIVV 293
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + +Q+ +I+ I+++ NF+ + +FISA+ N+ + SI+ Y+SS+
Sbjct: 294 AINKWDGLSDDQKDLIRFEIERRFNFIPYVKVHFISALHGTNVGNLYPSIHKAYESSMFK 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST+R+T+ L A+ +PP R KLRYAH GG NPPI+VIHGN+ + Y+RYL
Sbjct: 354 VSTNRLTQILEDAVAANPPPMSGGRRIKLRYAHLGGHNPPIVVIHGNQTGSLPKSYQRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|444426825|ref|ZP_21222229.1| GTP-binding protein Der [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444239923|gb|ELU51476.1| GTP-binding protein Der [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 498
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 292/447 (65%), Gaps = 31/447 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
K + I++ + DF++LG+ + + I+A +G G+ LE L
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESGEGEIED 179
Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
EL + + ++ EF + + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAVEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+V+HGN ++ + + YKRYL
Sbjct: 419 AGGYNPPIVVVHGNMVRDLPDSYKRYL 445
>gi|424032156|ref|ZP_17771576.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-01]
gi|424042347|ref|ZP_17780087.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-02]
gi|408876161|gb|EKM15290.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-01]
gi|408889698|gb|EKM28043.1| ribosome-associated GTPase EngA [Vibrio cholerae HENC-02]
Length = 498
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/447 (44%), Positives = 292/447 (65%), Gaps = 31/447 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
K + I++ + DF++LG+ + + I+A +G G+ LE L
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179
Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
EL + + ++ EF + + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAIEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN ++ + + YKRYL
Sbjct: 419 AGGYNPPIVVIHGNMVRDLPDSYKRYL 445
>gi|156973384|ref|YP_001444291.1| GTP-binding protein EngA [Vibrio harveyi ATCC BAA-1116]
gi|166225933|sp|A7MZE5.1|DER_VIBHB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|156524978|gb|ABU70064.1| hypothetical protein VIBHAR_01071 [Vibrio harveyi ATCC BAA-1116]
Length = 498
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 292/447 (65%), Gaps = 31/447 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
K + I++ + DF++LG+ + + I+A +G G+ LE L
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEDGEIED 179
Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
EL + + ++ EF + + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAVEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+V+HGN ++ + + YKRYL
Sbjct: 419 AGGYNPPIVVVHGNMVRDLPDSYKRYL 445
>gi|344343052|ref|ZP_08773922.1| GTP-binding protein engA [Marichromatium purpuratum 984]
gi|343805604|gb|EGV23500.1| GTP-binding protein engA [Marichromatium purpuratum 984]
Length = 466
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/419 (46%), Positives = 275/419 (65%), Gaps = 6/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG G IG ++I+DTGG
Sbjct: 1 MLPVITLVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRQYGVGRIGPGPYVIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+G+ M +Q + AI E+D ++F+VD R G +D I LR+ G+P+ LV+NK
Sbjct: 61 A-TATEGVETLMERQVQLAIEEADHLLFVVDARDGCTPEDIAIAERLRRIGKPMTLVVNK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
S+ + ++ +F+ LG+G P +SA G I+ +E++ ++E
Sbjct: 120 SDTFDPLLATAEFHALGLGEPRAVSATQGMAIRPLVEHVFA----LLPEPAEEEAAEEDD 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+KVAIVG+PN GKSTLIN L+GE RV+ +D+PGTTRDS+ FE + ++Y LIDTAG
Sbjct: 176 ERGVKVAIVGRPNAGKSTLINRLVGEERVVAFDSPGTTRDSVFIPFERDGRRYTLIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E IEKFSVIKTL++I ANVV+L++DA I QD +A + +SGR+++V
Sbjct: 236 LRRRAKVKEAIEKFSVIKTLQAIEAANVVVLVIDAHAGIGEQDATLAGHVIDSGRAVVVA 295
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + R+ +K +KL FL FA + ISA+ + + ++ ++ Y ++ +L
Sbjct: 296 INKWDGLDAEAREQVKAQFTRKLGFLDFAKLHRISALHGSGVGLLLDDVDLAYANATRNL 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST +TR L +A++ H P + R KLRYAHQGG+NPP++VIHGN+ + YKRYL
Sbjct: 356 STPELTRLLEAAVQEHQPPLVRGRRIKLRYAHQGGRNPPVVVIHGNQTEETPASYKRYL 414
>gi|149190086|ref|ZP_01868363.1| GTP-binding protein EngA [Vibrio shilonii AK1]
gi|148836116|gb|EDL53076.1| GTP-binding protein EngA [Vibrio shilonii AK1]
Length = 494
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/445 (43%), Positives = 292/445 (65%), Gaps = 32/445 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P LVINK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTSADEAIAQHLRKIEKPSFLVINK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
+ I++ + S +F++LG+ + + I+A +G G+ +E L P+ + F ++
Sbjct: 120 VDGIDADAASAEFWQLGVEDMYHIAAAHGRGVTALIERALN---PFAESFVEQGEIEDLT 176
Query: 173 -------------------EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
EF + + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 EFEDEEEEKLDYTEEEAEEEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 235
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + ++++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++D
Sbjct: 236 PGTTRDSIYIPMQRDDREYVLIDTAGVRRRRRINETVEKFSVVKTLKAVEDANVVLLVID 295
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F SGRS+++ VNKWD + + ++ +K + ++L F+ FA +FI
Sbjct: 296 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLDTDVKEHVKKELDRRLGFVDFARIHFI 355
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A ++H P + R KL+YAH G
Sbjct: 356 SALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATEDHQPPMVRGRRVKLKYAHAG 415
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPI+V+HGN + + + YKRYL
Sbjct: 416 GYNPPIVVVHGNLVNELPDSYKRYL 440
>gi|419365946|ref|ZP_13907107.1| small GTP-binding domain protein [Escherichia coli DEC13E]
gi|378212255|gb|EHX72578.1| small GTP-binding domain protein [Escherichia coli DEC13E]
Length = 487
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/440 (45%), Positives = 287/440 (65%), Gaps = 30/440 (6%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
++ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG +
Sbjct: 1 MVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGID-G 59
Query: 64 VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSEN 123
+ G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK++
Sbjct: 60 TEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDG 119
Query: 124 INSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY 182
++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E + EY
Sbjct: 120 LDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-EDAEY 175
Query: 183 ------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTR 218
IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTR
Sbjct: 176 WAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTR 235
Query: 219 DSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNI 278
DSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA++ I
Sbjct: 236 DSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGI 295
Query: 279 SAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKL 338
S QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA+
Sbjct: 296 SDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKEMLDFRLGFIDFARVHFISALHG 355
Query: 339 NNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPP 398
+ + + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG NPP
Sbjct: 356 SGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPP 415
Query: 399 IIVIHGNRLKYIGNDYKRYL 418
I+VIHGN++K + + YKRYL
Sbjct: 416 IVVIHGNQVKDLPDSYKRYL 435
>gi|344199661|ref|YP_004783987.1| GTP-binding protein engA [Acidithiobacillus ferrivorans SS3]
gi|343775105|gb|AEM47661.1| GTP-binding protein engA [Acidithiobacillus ferrivorans SS3]
Length = 449
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/420 (45%), Positives = 278/420 (66%), Gaps = 6/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ LVGRPNVGKST FNRLT +R+ALVA++PGLTRDRHYG ++++DTGGF
Sbjct: 1 MTAIIALVGRPNVGKSTFFNRLTRTREALVADFPGLTRDRHYGTAQFEGHQYLVVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE ++G++ M QT+ AI E+D + F+VD ++GL QD I LR+ G+PI LV+NK
Sbjct: 61 EPEEREGLVAAMAVQTRLAITEADAVCFLVDAKEGLSAQDAEIAEELRRGGKPIYLVVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + L +F+ LG+G P+ ISA +G+G++ LE I + +LP + E +
Sbjct: 121 MDAKGAVSELPEFHRLGLGMPYTISAAHGHGVEPLLEAIFS-DLPNPE----DEAAAAAA 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++A++G+PNVGKSTL+N++LGE RV+ +D PGTTRDSI+ +E K Y++IDTAG
Sbjct: 176 GKGPRIAMLGRPNVGKSTLVNAMLGEKRVLVFDEPGTTRDSIRIPYERQGKPYVMIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + E +EK SV+KTL ++ EA+VV+L+LDA+ I+ QD ++ E GR ++V
Sbjct: 236 MRRRARVGEGLEKLSVLKTLSALREADVVLLVLDARLGIAEQDSHLVGVAVELGRPIVVV 295
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + QRK +K ++++LNF+ +A ISA+ + +SI+ ++ S H
Sbjct: 296 VNKWDGMNPEQRKAVKQELERRLNFIKYAPIYTISALHGTGVGDLYKSIDQLWIDSRRHF 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST + RAL I+ H P R KLRY HQGG+NP +V HGN++ + YKRYLE
Sbjct: 356 STGELNRALADVIETHQPPMVGGRRIKLRYCHQGGENPITLVFHGNQVARLPGTYKRYLE 415
>gi|119505385|ref|ZP_01627459.1| predicted GTPase [marine gamma proteobacterium HTCC2080]
gi|119458840|gb|EAW39941.1| predicted GTPase [marine gamma proteobacterium HTCC2080]
Length = 472
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/420 (46%), Positives = 279/420 (66%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN+LT SRDALVAN GLTRDR YGEG IG FI+IDTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNQLTRSRDALVANLSGLTRDRKYGEGKIGDAPFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + GI M Q++ AI E+DI++ +VDGR GL D+ + ++LR+ +P LV+NK
Sbjct: 61 SGE-ELGIDAAMADQSRVAIDEADIVLLLVDGRAGLHPGDESLVSYLRQRSKPFHLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + I+ DFY LG H I+A + G+ + +++ LP + + +
Sbjct: 120 IDGVGEDIAASDFYRLGCSQLHTIAASHNRGVLQLITSVID-ALP------QAAPADALN 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I+VA+VG+PNVGKSTL+N LLGE+RV+ +D PGTTRDS+ +E +++ Y LIDTAG
Sbjct: 173 DPSIRVAVVGRPNVGKSTLVNRLLGEDRVVVFDKPGTTRDSVYIRYERHDQAYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR EV+EKFS++KTLK+I EA+VVILL+DA + + QD+++ ++GR L+V
Sbjct: 233 VRRRKNVREVVEKFSIVKTLKAINEAHVVILLMDAHEGLVEQDLHLLGQCIDAGRGLVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD I ++R I++ + ++L F+ +A +FISA+ + ESI+ + ++ L
Sbjct: 293 INKWDGIASDERDWIRSELNRRLQFVDYADVHFISALHGTGVGHLYESIHQAHRAATTSL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T+++TR L A+ HPP R KLRYAH GG+NPPI+VIHG++ + Y RYLE
Sbjct: 353 NTNKLTRILEDAVATHPPPLVNGRRVKLRYAHAGGQNPPIVVIHGSQTDALPASYARYLE 412
>gi|399908771|ref|ZP_10777323.1| GTP-binding protein EngA [Halomonas sp. KM-1]
Length = 467
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/419 (45%), Positives = 279/419 (66%), Gaps = 7/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G K++ +IDTGG
Sbjct: 1 MTPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGDKAYTVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+DI++F+VD R GL D+ I N LR + + LV+NK
Sbjct: 61 SGD-EEGIDAAMAEQSLAAIDEADIVLFLVDARAGLNVADEAIANHLRVNQKKTWLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + S DF++LG+G+P I+A +G + + +E +L P+ + +
Sbjct: 120 TDGLEEHSAMADFWQLGLGDPRPIAAAHGRNVTSLIEEVLA---PFPE--RDLSIPADTG 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++ ++G+PNVGKSTL+N LLGE RV+ +D GTTRD+I+ FE K Y+LIDTAG
Sbjct: 175 TKGIRIGVIGRPNVGKSTLVNRLLGEERVVVFDEAGTTRDAIEIPFERRGKPYVLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E+ EKFS+IKTL++I E +V I++LDA+ + QD+++ +++ +GR+L++
Sbjct: 235 VRRRKNVSEIAEKFSIIKTLEAIKECHVAIMVLDARSGLVEQDLHLLDYVLTTGRALVLA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + H ++ ++ +IK++L F +A +FISA+ + SI + S+ H
Sbjct: 295 VNKWDGLEHEAKEKMRADIKRRLGFADYADLHFISALHGTAVGDLYPSIERAFASANSHW 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+R+T L A+ HPP R KLR AHQGG NPPIIV+HGN+ + + YKR+L
Sbjct: 355 STNRLTTLLQDAVSQHPPPLVHGRRIKLRMAHQGGSNPPIIVVHGNQTEALPESYKRFL 413
>gi|163802477|ref|ZP_02196370.1| GTP-binding protein EngA [Vibrio sp. AND4]
gi|159173778|gb|EDP58593.1| GTP-binding protein EngA [Vibrio sp. AND4]
Length = 498
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 292/447 (65%), Gaps = 31/447 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQASLGEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
K + I++ + DF++LG+ + + I+A +G G+ LE L
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYHIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179
Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
EL + + ++ EF + + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTGFEDEELAIEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+V+HGN ++ + + YKRYL
Sbjct: 419 AGGYNPPIVVVHGNMVRELPDSYKRYL 445
>gi|350530365|ref|ZP_08909306.1| GTP-binding protein Der [Vibrio rotiferianus DAT722]
Length = 498
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 292/447 (65%), Gaps = 31/447 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLGEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI----------------- 161
K + I++ + DF++LG+ + + I+A +G G+ LE L
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLASESEEGEIED 179
Query: 162 -------ELPYKKFFKKK---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
EL + + ++ EF + + IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 LTEFEDEELAIEDYTEEDAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVY 238
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L+
Sbjct: 239 DMPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLV 298
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +
Sbjct: 299 IDARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIH 358
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 359 FISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAH 418
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+V+HGN ++ + + YKRYL
Sbjct: 419 AGGYNPPIVVVHGNMVRDLPDSYKRYL 445
>gi|94501121|ref|ZP_01307644.1| predicted GTPase [Oceanobacter sp. RED65]
gi|94426697|gb|EAT11682.1| predicted GTPase [Oceanobacter sp. RED65]
Length = 482
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/419 (44%), Positives = 286/419 (68%), Gaps = 3/419 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA+ GLTRDR +G G +G++ +I++DTGG
Sbjct: 1 MNPVIALVGRPNVGKSTLFNRLTRTRDALVADLAGLTRDRKFGAGKVGERDYIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+++G+ +M +Q+ QA+ E+DI++F+VD R GL DK+I LR + + +V+NK
Sbjct: 61 SG-MEQGLDAKMAEQSFQAMDEADIVLFLVDARAGLTSADKMIAQHLRATEKKTYVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +N ++ +FYELG+G I+A + GI ++++L ELP + + S
Sbjct: 120 IDGLNPDVATSEFYELGLGELQTIAATHNRGINVLMDHVLN-ELPPEFQIDEDADEEDES 178
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +++++VG+PNVGKSTL+N +LGE+RV+ YD PGTT DSI+ +E N K Y LIDTAG
Sbjct: 179 EKGVRISVVGRPNVGKSTLVNRMLGEDRVVVYDHPGTTMDSIEIPYERNEKPYTLIDTAG 238
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E EKFS++K L++I +ANV I+++DA++ I QD+ + +F+ SG+ L++
Sbjct: 239 VRRRKNIKEAAEKFSIVKALQAIQDANVCIVVIDAREGIVEQDLTMLSFVLNSGKGLVIA 298
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + Q+ +K ++++L+F+ +A +FISA + ES++ Y S+ ++L
Sbjct: 299 LNKWDGMDIEQKDFVKKELERRLSFVDWADMHFISAKHGTGVGHLYESVDEAYKSAYMNL 358
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS++TR L A+ +H P R KLRYAHQGG NPP+IV+HGN+ + + YKRYL
Sbjct: 359 STSQLTRILEDAVMDHQPPLVGGRRIKLRYAHQGGMNPPVIVVHGNKTASLPDSYKRYL 417
>gi|398795011|ref|ZP_10554953.1| ribosome-associated GTPase EngA [Pantoea sp. YR343]
gi|398207290|gb|EJM94040.1| ribosome-associated GTPase EngA [Pantoea sp. YR343]
Length = 496
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/447 (44%), Positives = 285/447 (63%), Gaps = 33/447 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ + M +Q+ AI E+D+++F+VD R G++ D+ I N LR + +V NK
Sbjct: 61 D-GTEEGVENRMAEQSLLAIEEADVVLFMVDARAGVMPADQQIANHLRAREKATFVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK-----------F 168
++ I+ + LDFY LG+G H I+A +G G+ + LE L LP+ +
Sbjct: 120 TDGIDPEAAVLDFYALGLGEIHAIAASHGRGVNSLLETAL---LPWMEEIVPEVELTEEE 176
Query: 169 FKKKEFTNIHSIEY-----------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
+ ++ IK+AIVG+PNVGKSTL N +LGE+RV+ +
Sbjct: 177 ENAAYWADLEEETEKALEEEEEEDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVF 236
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E ++++Y+LIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDDREYVLIDTAGVRKRGKITETVEKFSVIKTLQAIEDANVVMLV 296
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA+ IS QD+++ FI SGRSL++ VNKWD + R +K + +L F+ FA +
Sbjct: 297 IDARAGISDQDLSLLGFILNSGRSLVIVVNKWDGMTQEARDEVKEMLDFRLGFIDFARIH 356
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + + + ES+ YD S + T+ +TR + A +H P + R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESVTEAYDCSTKRVGTAMLTRIMTMAADDHQPPLVRGRRVKLKYAH 416
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++K + + YKRYL
Sbjct: 417 AGGYNPPIVVIHGNQVKDLADSYKRYL 443
>gi|350552159|ref|ZP_08921365.1| GTP-binding protein engA [Thiorhodospira sibirica ATCC 700588]
gi|349795024|gb|EGZ48830.1| GTP-binding protein engA [Thiorhodospira sibirica ATCC 700588]
Length = 467
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/420 (45%), Positives = 278/420 (66%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M V+ LVGRPNVGKSTLFN+LT SRDALVA+ PGLTRDR YG G +G ++++DTGG
Sbjct: 1 MSAVIALVGRPNVGKSTLFNQLTRSRDALVADLPGLTRDRQYGIGKVGDFPYMVVDTGGL 60
Query: 61 EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E + +M + M QT+QAI ESD+++ ++D R+GL D+ I LR+S +P+++V N
Sbjct: 61 SGEAE--VMDQLMAAQTRQAIAESDLVLLMLDTREGLNSVDEAIAEQLRRSAKPVLVVAN 118
Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
KS+ ++ + +L+F+ LG G P+ I+A++G GI + + LP +
Sbjct: 119 KSDGLDVTQATLEFHALGFGAPYAIAAVHGRGIAGLMAEVKQ-RLPQAAVVSTESQALDM 177
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A+VG+PNVGKSTL+N +LGE RV+ D PGTTRDSI FE + + Y LIDTA
Sbjct: 178 DWPGIRIALVGRPNVGKSTLLNRILGEERVLACDLPGTTRDSIFVPFERDGQDYTLIDTA 237
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR + + IEKFSVIKTL++I A+VVI+L+DA Q I QD ++ I E+GR+++V
Sbjct: 238 GVRRRARVHDGIEKFSVIKTLQAIEAAHVVIMLVDAHQGIVEQDAHLLGLILEAGRAVVV 297
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + + R+ +++++ +L F+ FA FISA+ + S+ Y S+ +
Sbjct: 298 AINKWDGLSPDARERLRDDLGLRLGFMDFAEQRFISALHGTGVGDLFGSVQRAYASAQLK 357
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST+ +TR L A+ H P + R KLRYAHQGG+NPP+IVIHG + + + YKRYL
Sbjct: 358 VSTAELTRLLEMALVEHQPPLVRGRRIKLRYAHQGGQNPPLIVIHGKQTESLPGAYKRYL 417
>gi|291618407|ref|YP_003521149.1| EngA [Pantoea ananatis LMG 20103]
gi|378766159|ref|YP_005194620.1| GTP-binding protein EngA [Pantoea ananatis LMG 5342]
gi|386016727|ref|YP_005935017.1| GTP-binding protein EngA [Pantoea ananatis AJ13355]
gi|386078393|ref|YP_005991918.1| GTP-binding protein EngA [Pantoea ananatis PA13]
gi|291153437|gb|ADD78021.1| EngA [Pantoea ananatis LMG 20103]
gi|327394799|dbj|BAK12221.1| GTP-binding protein EngA [Pantoea ananatis AJ13355]
gi|354987574|gb|AER31698.1| GTP-binding protein EngA [Pantoea ananatis PA13]
gi|365185633|emb|CCF08583.1| GTP-binding protein EngA [Pantoea ananatis LMG 5342]
Length = 494
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/445 (44%), Positives = 283/445 (63%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R G++ D+ I LR + LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ + +DFY LG+G H I+A +G G+ + LE L LP+ + E T
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIHAIAASHGRGVTSLLETAL---LPWMEKVDPVEVTEEDE 176
Query: 180 IEY--------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
E IK+AIVG+PNVGKSTL N +LGE+RV+ YD
Sbjct: 177 NEAYWAALAAEENGEEEEEEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDTVEKFSVIKTLQAIEDANVVMLVID 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A+ IS QD+++ FI SGRSL++ VNKWD + R +K + +L F+ FA +FI
Sbjct: 297 ARAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARVHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + + + ES+ YD S ++TS +TR + A ++H P + R KL+YAH G
Sbjct: 357 SALHGSGVGNLFESVTEAYDCSTKRVNTSLLTRIMNMAAEDHQPPLVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPI+VIHGN++K + + YKRYL
Sbjct: 417 GYNPPIVVIHGNQVKDLPDSYKRYL 441
>gi|383189018|ref|YP_005199146.1| ribosome-associated GTPase EngA [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371587276|gb|AEX51006.1| ribosome-associated GTPase EngA [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 494
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/446 (45%), Positives = 285/446 (63%), Gaps = 32/446 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I FII+DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTKTRDALVADFPGLTRDRKYGRAEIEGNEFIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M Q+ AI E+DI++F+VD R GL+ D+ I LR + LV NK
Sbjct: 61 D-GTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSREKATFLVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
++ ++ S + DFY LG+G+ + I+A +G G+ +E++L +P+
Sbjct: 120 TDGLDPDSATGDFYSLGLGDVYAIAASHGRGVTQLIEHVL---IPFIGEKPEEVELTEEE 176
Query: 166 --KKFFKKKEFTNIHSIE-----------YIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
++ ++E T E IK+AIVG+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 ANAAYWAEQEATGDEIPEDEEDNFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYD 236
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI ++++YILIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMNRDDREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVMLVI 296
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++ IS QD+++ FI SGRSL++ VNKWD + R +K+ + +L F+ FA +F
Sbjct: 297 DAREGISDQDLSLLGFILNSGRSLVIVVNKWDGMSEEARAQVKDQLDLRLGFVDFARIHF 356
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + + + ES+N Y + +STS +TR + A +H P R KL+YAH
Sbjct: 357 ISALHGSGVGNLFESVNEAYTCATTRVSTSLLTRIMQMAADDHQPPLVNGRRVKLKYAHA 416
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++K + + YKRYL
Sbjct: 417 GGYNPPIVVIHGNQVKDLADSYKRYL 442
>gi|300114862|ref|YP_003761437.1| ribosome-associated GTPase EngA [Nitrosococcus watsonii C-113]
gi|299540799|gb|ADJ29116.1| ribosome-associated GTPase EngA [Nitrosococcus watsonii C-113]
Length = 464
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/420 (46%), Positives = 287/420 (68%), Gaps = 10/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGG- 59
MK ++ LVGRPNVGKSTLFNRLT SRDALVA+ PG+TRDR YG Y G++SF ++DTGG
Sbjct: 1 MKALVALVGRPNVGKSTLFNRLTRSRDALVADQPGVTRDRQYGLAYCGEQSFFVVDTGGI 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E E + G + M Q + AI E+D+I F+VD R+GL D+ I +LR + +P+ LVIN
Sbjct: 61 MEQESEIGSL--MRGQAQLAIEEADVIFFLVDAREGLSSLDEEIAEWLRCTEKPLKLVIN 118
Query: 120 KSENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K+E + ++ +FY LG+G P IISA G G++ +L L +E + I
Sbjct: 119 KAEGRDEDLVASEFYCLGLGEPAIISARQGQGVE-----VLLQALLTLLPVAGREESEIQ 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ + +++A++G+PNVGKSTL+N +LGE RV++ + PGTTRDSI F ++ + Y L+DTA
Sbjct: 174 A-KGLQLAVIGRPNVGKSTLVNRILGEERVLSSEIPGTTRDSISIPFRHHGRDYTLVDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRRR++ + +EKFSVI++L+SI A VVIL++DA ++ QD+++A I ESG+ +++
Sbjct: 233 GIRRRSRILDRVEKFSVIQSLQSIAIAQVVILVIDAHDSVVEQDLHLAGVILESGKGVVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + QR+ +K ++ ++L FL FA +FISA+ + + SI+ Y S+
Sbjct: 293 AVNKWDGLPLEQRQRVKKDLDRRLPFLVFARIHFISALHGSGVGDLFPSIDEAYQSANSQ 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
L T + RAL++A++ HPP K R KLRYAHQGG+NPP I+IHGN+ + + +Y+RYL
Sbjct: 353 LPTGELNRALLAAVEKHPPPIVKGRRIKLRYAHQGGQNPPKIIIHGNQAEAVSANYRRYL 412
>gi|261856783|ref|YP_003264066.1| ribosome-associated GTPase EngA [Halothiobacillus neapolitanus c2]
gi|261837252|gb|ACX97019.1| ribosome-associated GTPase EngA [Halothiobacillus neapolitanus c2]
Length = 567
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/420 (47%), Positives = 277/420 (65%), Gaps = 5/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFN++T SR ALVA+Y GLTRDR YG + FI+IDTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNQMTRSRAALVADYAGLTRDRQYGSAEHEGRDFIVIDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + GI M Q AI E+D ++F+VD R GL D+ I LR+S +PI LV+NK
Sbjct: 61 TGE-RGGIEALMQDQAWAAIEEADCVVFMVDARAGLTVADQEIAEKLRRSSKPIQLVVNK 119
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ S + +F LG+G P +A +G GI + +L + L K +E +
Sbjct: 120 VDGVDESLVQAEFARLGLGEPVFTTASHGRGISTLWDAVL-VRLADKLAVMDEEPE--YD 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I+VA++G+PNVGKSTL N LLGE+RV+ +D PGTTRDSI FE N K Y LIDTAG
Sbjct: 177 EKTIRVALIGRPNVGKSTLTNRLLGEDRVLAFDQPGTTRDSIYIPFEQNGKAYTLIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + E+IEKFS++KTL++I ANVVIL+ DA + IS QD ++ FI++ GR+L++
Sbjct: 237 VRRRARVNEMIEKFSIVKTLQAIEAANVVILVCDAHEGISEQDQHLLGFIHDRGRALVIA 296
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ R +K I +L+F+++A +FISA+ + ES++ Y +++ +
Sbjct: 297 INKWDNLTDYARAEVKRQIDLRLDFINYAEMHFISALHGTGVGHLFESVDKAYLAAMRDI 356
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+ +TR+L +A+ H P R KLRYAHQGG NPPIIVIHG + + +Y RYLE
Sbjct: 357 STNVLTRSLEAAVFAHQPPLIHGRRIKLRYAHQGGSNPPIIVIHGKQTDRLPGNYSRYLE 416
>gi|433656890|ref|YP_007274269.1| GTP-binding protein EngA [Vibrio parahaemolyticus BB22OP]
gi|432507578|gb|AGB09095.1| GTP-binding protein EngA [Vibrio parahaemolyticus BB22OP]
Length = 498
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/446 (44%), Positives = 292/446 (65%), Gaps = 29/446 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ + ++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLDEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTSADEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLE--------NILTIELPYKKFFK 170
K + I++ + DF++LG+ + + I+A +G G+ LE ++LT E +
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLTSESEEGEIED 179
Query: 171 KKEF--TNIHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
EF +I EY IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 LTEFEDADIAPDEYTEEEAEAEFQRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 239
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI E + ++Y++IDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 240 MPGTTRDSIYIPMERDGREYVIIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLVI 299
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +F
Sbjct: 300 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHF 359
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 360 ISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAHA 419
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN ++ + + YKRYL
Sbjct: 420 GGYNPPIVVIHGNMVRELPDSYKRYL 445
>gi|417320643|ref|ZP_12107186.1| GTP-binding protein Der [Vibrio parahaemolyticus 10329]
gi|328472592|gb|EGF43455.1| GTP-binding protein Der [Vibrio parahaemolyticus 10329]
Length = 498
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/446 (44%), Positives = 292/446 (65%), Gaps = 29/446 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ + ++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLDEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTSADEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLE--------NILTIELPYKKFFK 170
K + I++ + DF++LG+ + + I+A +G G+ LE ++LT E +
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLTSESEEGEIED 179
Query: 171 KKEFTN--IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
EF + I EY IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 LTEFEDAEIAPDEYTEEEAEAEFQRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 239
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI E + ++Y++IDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 240 MPGTTRDSIYIPMERDGREYVIIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLVI 299
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +F
Sbjct: 300 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHF 359
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 360 ISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAHA 419
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN ++ + + YKRYL
Sbjct: 420 GGYNPPIVVIHGNMVRELPDSYKRYL 445
>gi|410663501|ref|YP_006915872.1| GTP-binding protein Der [Simiduia agarivorans SA1 = DSM 21679]
gi|409025858|gb|AFU98142.1| GTP-binding protein Der [Simiduia agarivorans SA1 = DSM 21679]
Length = 523
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/420 (46%), Positives = 277/420 (65%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PVL LVGRPNVGKSTLFN LT SRDALVA+Y GLTRDR YGEG +G +SF++IDTGG
Sbjct: 1 MVPVLALVGRPNVGKSTLFNCLTRSRDALVADYAGLTRDRKYGEGEVGGRSFMVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E ++GI M Q+ QAI ESD ++F+VD + GL D++I LR +P +V NK
Sbjct: 61 SGE-EEGIDSVMAGQSLQAIEESDAVLFLVDCKAGLTPADEMIARHLRTRNKPTFVVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ N I+L FYE+G+G +A + G++ L+ +L+ F + E + +
Sbjct: 120 VDGTNPDIALAPFYEMGLGKIFPTTATHRKGVRAMLDAVLS-------EFPEPEAEEVET 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +K+A+VG+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI +E + Y LIDTAG
Sbjct: 173 PQGVKIAVVGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYINYERHGANYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR E +EKFS++KTL++I +ANVV+LL DA + + QD+++ E+GR+L++
Sbjct: 233 IRRRKNVKETVEKFSIVKTLQAIDDANVVVLLCDASEGLVEQDLHLLGHTIEAGRALVIA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + + ++ +KN + ++L F+ FA ++ISA + +SI Y ++ +
Sbjct: 293 LNKWDGLEDSHKEYVKNELDRRLRFIDFADIHYISAKHGTGVGHLYDSIERAYQAATEKM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+ +TR L A++ H P + R KLRYAH GG NPPIIVIHGN+ + + Y +YLE
Sbjct: 353 STNFLTRVLQDAVREHQPPMIRGHRIKLRYAHPGGNNPPIIVIHGNQTGELPDAYVKYLE 412
>gi|119944927|ref|YP_942607.1| GTP-binding protein EngA [Psychromonas ingrahamii 37]
gi|166225845|sp|A1SU43.1|DER_PSYIN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|119863531|gb|ABM03008.1| small GTP-binding protein [Psychromonas ingrahamii 37]
Length = 489
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/439 (44%), Positives = 289/439 (65%), Gaps = 24/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ I + FI+IDTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKIDEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M Q+ AI E+D ++F+VD R G+ D+ I + LRK + + +V NK
Sbjct: 61 TGD-EEGIDALMAGQSLLAIDEADAVLFLVDARAGMTIADEAIADHLRKQDKKVFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ +++ S+ +FY LG+G + I+A G G++ +E + ++ + ++ +F+++ +
Sbjct: 120 TDGVDADSVCAEFYALGLGEVYHIAAAQGKGVRQMIE--IALDGFFDDVEQEDDFSDLET 177
Query: 180 -IEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
+E+ IK+A++G+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 178 GLEFVEEDEALLLKEQERLAALPIKLALIGRPNVGKSTLTNRILGEERVLVYDLPGTTRD 237
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI ++++YILIDTAG+R+R K E +EKFSVIKTL++I + NVV+L++DA+ IS
Sbjct: 238 SIYIPMSRDDREYILIDTAGVRKRKKVNETVEKFSVIKTLQAIEDCNVVLLIIDARDGIS 297
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+++ F +GRSL++ VNKWD + ++ +K+ + ++L F+ FA +FISA+
Sbjct: 298 DQDLSLLGFTLNAGRSLVIAVNKWDGMTEYDKERVKSELDRRLGFIDFAKIHFISALHGT 357
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ ES+ YDSS +STS +TR + A +H P R KLRYAH GG NPP+
Sbjct: 358 GVGHLYESVEEAYDSSTKRISTSILTRIMTMAAADHEPPMVGSRRVKLRYAHAGGYNPPL 417
Query: 400 IVIHGNRLKYIGNDYKRYL 418
IVIHGN++K + + YKRYL
Sbjct: 418 IVIHGNQVKKLADSYKRYL 436
>gi|28897386|ref|NP_796991.1| GTP-binding protein EngA [Vibrio parahaemolyticus RIMD 2210633]
gi|308094331|ref|ZP_05888700.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AN-5034]
gi|308095608|ref|ZP_05907112.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus Peru-466]
gi|308125630|ref|ZP_05776379.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus K5030]
gi|308126072|ref|ZP_05907679.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AQ4037]
gi|31340057|sp|Q87S12.1|DER_VIBPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|28805598|dbj|BAC58875.1| GTP-binding protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308086906|gb|EFO36601.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus Peru-466]
gi|308092889|gb|EFO42584.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AN-5034]
gi|308106660|gb|EFO44200.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AQ4037]
gi|308113011|gb|EFO50551.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus K5030]
Length = 498
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/446 (44%), Positives = 292/446 (65%), Gaps = 29/446 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ + ++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLDEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPADEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLE--------NILTIELPYKKFFK 170
K + I++ + DF++LG+ + + I+A +G G+ LE ++LT E +
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLTSESEEGEIED 179
Query: 171 KKEFTN--IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
EF + I EY IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 LTEFEDAEIAPDEYTEEEAEAEFQRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 239
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI E + ++Y++IDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 240 MPGTTRDSIYIPMERDGREYVIIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLVI 299
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +F
Sbjct: 300 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHF 359
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 360 ISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAHA 419
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN ++ + + YKRYL
Sbjct: 420 GGYNPPIVVIHGNMVRELPDSYKRYL 445
>gi|153838555|ref|ZP_01991222.1| GTP-binding protein EngA [Vibrio parahaemolyticus AQ3810]
gi|149748070|gb|EDM58929.1| GTP-binding protein EngA [Vibrio parahaemolyticus AQ3810]
Length = 498
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/446 (44%), Positives = 292/446 (65%), Gaps = 29/446 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ + ++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQARLDEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPADEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLE--------NILTIELPYKKFFK 170
K + I++ + DF++LG+ + + I+A +G G+ LE ++LT E +
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLTSESEEGEIED 179
Query: 171 KKEFTN--IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
EF + I EY IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 LTEFEDAEIAPDEYTEEEAEAEFQRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 239
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI E + ++Y++IDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 240 MPGTTRDSIYIPMERDGREYVIIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLVI 299
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +F
Sbjct: 300 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLGFVDFARIHF 359
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ESI Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 360 ISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRIKLKYAHA 419
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN ++ + + YKRYL
Sbjct: 420 GGYNPPIVVIHGNMVRELPDSYKRYL 445
>gi|365540816|ref|ZP_09365991.1| GTP-binding protein Der [Vibrio ordalii ATCC 33509]
Length = 495
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/443 (44%), Positives = 289/443 (65%), Gaps = 26/443 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D++I LRK + +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEMIAQHLRKIEKRAILVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL------TIELPYKKFFKKKE 173
+ I++ + S +F++LG+ + I+A +G G+ ++ L IE + E
Sbjct: 120 VDGIDADAASAEFWQLGVDQMYQIAAAHGRGVGILIDRALNPLAEEMIEQAEGEIEDLSE 179
Query: 174 FTNIHS--IEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
F + ++Y IK+AI+G+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 FEDAEEEKLDYTEEEAEAEYKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG 239
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++DA+
Sbjct: 240 TTRDSIYIPMMRDEREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVLLVIDAR 299
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+NIS QD+++ F SGRS+++ VNKWD + ++ ++ +K + ++L F+ FA +FISA
Sbjct: 300 ENISDQDLSLLGFALNSGRSIVLAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHFISA 359
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + ES+ Y S+ + TS +TR L A +H P + R KL+YAH GG
Sbjct: 360 LHGTGVGHLFESVQEAYKSATTRVGTSVLTRILKMATDDHQPPMVRSRRVKLKYAHAGGY 419
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPIIV+HGN + + + YKRYL
Sbjct: 420 NPPIIVVHGNLVNELPDSYKRYL 442
>gi|15640782|ref|NP_230412.1| GTP-binding protein EngA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121585667|ref|ZP_01675462.1| GTP-binding protein [Vibrio cholerae 2740-80]
gi|121726039|ref|ZP_01679338.1| GTP-binding protein [Vibrio cholerae V52]
gi|147675115|ref|YP_001216248.1| GTP-binding protein EngA [Vibrio cholerae O395]
gi|153817276|ref|ZP_01969943.1| GTP-binding protein [Vibrio cholerae NCTC 8457]
gi|153821375|ref|ZP_01974042.1| GTP-binding protein [Vibrio cholerae B33]
gi|227080942|ref|YP_002809493.1| GTP-binding protein EngA [Vibrio cholerae M66-2]
gi|227117137|ref|YP_002819033.1| GTP-binding protein [Vibrio cholerae O395]
gi|229505623|ref|ZP_04395133.1| GTP-binding protein EngA [Vibrio cholerae BX 330286]
gi|229510705|ref|ZP_04400184.1| GTP-binding protein EngA [Vibrio cholerae B33]
gi|229517827|ref|ZP_04407271.1| GTP-binding protein EngA [Vibrio cholerae RC9]
gi|229608641|ref|YP_002879289.1| GTP-binding protein EngA [Vibrio cholerae MJ-1236]
gi|254847900|ref|ZP_05237250.1| GTP-binding protein EngA [Vibrio cholerae MO10]
gi|255744569|ref|ZP_05418520.1| GTP-binding protein EngA [Vibrio cholera CIRS 101]
gi|262161296|ref|ZP_06030407.1| GTP-binding protein EngA [Vibrio cholerae INDRE 91/1]
gi|262168789|ref|ZP_06036484.1| GTP-binding protein EngA [Vibrio cholerae RC27]
gi|298499104|ref|ZP_07008911.1| ribosome-associated GTPase EngA [Vibrio cholerae MAK 757]
gi|360034670|ref|YP_004936433.1| GTP-binding protein EngA [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740610|ref|YP_005332579.1| GTP-binding protein Der [Vibrio cholerae IEC224]
gi|417812806|ref|ZP_12459463.1| GTPase Der [Vibrio cholerae HC-49A2]
gi|417815671|ref|ZP_12462303.1| GTPase Der [Vibrio cholerae HCUF01]
gi|418331805|ref|ZP_12942745.1| GTPase Der [Vibrio cholerae HC-06A1]
gi|418336569|ref|ZP_12945467.1| GTPase Der [Vibrio cholerae HC-23A1]
gi|418343062|ref|ZP_12949856.1| GTPase Der [Vibrio cholerae HC-28A1]
gi|418348231|ref|ZP_12952965.1| GTPase Der [Vibrio cholerae HC-43A1]
gi|418354767|ref|ZP_12957488.1| GTPase Der [Vibrio cholerae HC-61A1]
gi|419825223|ref|ZP_14348728.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1033(6)]
gi|421316576|ref|ZP_15767147.1| GTPase Der [Vibrio cholerae CP1032(5)]
gi|421320401|ref|ZP_15770958.1| GTPase Der [Vibrio cholerae CP1038(11)]
gi|421324397|ref|ZP_15774923.1| GTPase Der [Vibrio cholerae CP1041(14)]
gi|421328058|ref|ZP_15778572.1| GTPase Der [Vibrio cholerae CP1042(15)]
gi|421331076|ref|ZP_15781556.1| GTPase Der [Vibrio cholerae CP1046(19)]
gi|421334651|ref|ZP_15785118.1| GTPase Der [Vibrio cholerae CP1048(21)]
gi|421338544|ref|ZP_15788979.1| GTPase Der [Vibrio cholerae HC-20A2]
gi|421347329|ref|ZP_15797711.1| GTPase Der [Vibrio cholerae HC-46A1]
gi|422890866|ref|ZP_16933274.1| GTPase Der [Vibrio cholerae HC-40A1]
gi|422901741|ref|ZP_16937101.1| GTPase Der [Vibrio cholerae HC-48A1]
gi|422905966|ref|ZP_16940808.1| GTPase Der [Vibrio cholerae HC-70A1]
gi|422912561|ref|ZP_16947084.1| GTPase Der [Vibrio cholerae HFU-02]
gi|422925042|ref|ZP_16958071.1| GTPase Der [Vibrio cholerae HC-38A1]
gi|423144362|ref|ZP_17131975.1| GTPase Der [Vibrio cholerae HC-19A1]
gi|423149014|ref|ZP_17136372.1| GTPase Der [Vibrio cholerae HC-21A1]
gi|423152859|ref|ZP_17140056.1| GTPase Der [Vibrio cholerae HC-22A1]
gi|423155668|ref|ZP_17142776.1| GTPase Der [Vibrio cholerae HC-32A1]
gi|423159499|ref|ZP_17146470.1| GTPase Der [Vibrio cholerae HC-33A2]
gi|423164186|ref|ZP_17150971.1| GTPase Der [Vibrio cholerae HC-48B2]
gi|423730318|ref|ZP_17703635.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A1]
gi|423749162|ref|ZP_17711649.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-50A2]
gi|423892036|ref|ZP_17725722.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62A1]
gi|423926811|ref|ZP_17730338.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-77A1]
gi|424001366|ref|ZP_17744454.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A2]
gi|424005522|ref|ZP_17748505.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-37A1]
gi|424023533|ref|ZP_17763196.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62B1]
gi|424026336|ref|ZP_17765951.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-69A1]
gi|424585661|ref|ZP_18025254.1| GTPase Der [Vibrio cholerae CP1030(3)]
gi|424590001|ref|ZP_18029447.1| GTPase Der [Vibrio cholerae CP1037(10)]
gi|424594357|ref|ZP_18033694.1| GTPase Der [Vibrio cholerae CP1040(13)]
gi|424598222|ref|ZP_18037419.1| GTPase Der [Vibrio Cholerae CP1044(17)]
gi|424600975|ref|ZP_18040131.1| GTPase Der [Vibrio cholerae CP1047(20)]
gi|424605955|ref|ZP_18044919.1| GTPase Der [Vibrio cholerae CP1050(23)]
gi|424609788|ref|ZP_18048645.1| GTPase Der [Vibrio cholerae HC-39A1]
gi|424612591|ref|ZP_18051397.1| GTPase Der [Vibrio cholerae HC-41A1]
gi|424616412|ref|ZP_18055102.1| GTPase Der [Vibrio cholerae HC-42A1]
gi|424621350|ref|ZP_18059877.1| GTPase Der [Vibrio cholerae HC-47A1]
gi|424644327|ref|ZP_18082080.1| GTPase Der [Vibrio cholerae HC-56A2]
gi|424651971|ref|ZP_18089492.1| GTPase Der [Vibrio cholerae HC-57A2]
gi|424655918|ref|ZP_18093219.1| GTPase Der [Vibrio cholerae HC-81A2]
gi|440709050|ref|ZP_20889708.1| GTP-binding protein EngA [Vibrio cholerae 4260B]
gi|443502864|ref|ZP_21069852.1| GTPase Der [Vibrio cholerae HC-64A1]
gi|443506777|ref|ZP_21073566.1| GTPase Der [Vibrio cholerae HC-65A1]
gi|443510884|ref|ZP_21077547.1| GTPase Der [Vibrio cholerae HC-67A1]
gi|443514446|ref|ZP_21080984.1| GTPase Der [Vibrio cholerae HC-68A1]
gi|443518259|ref|ZP_21084675.1| GTPase Der [Vibrio cholerae HC-71A1]
gi|443523126|ref|ZP_21089365.1| GTPase Der [Vibrio cholerae HC-72A2]
gi|443530758|ref|ZP_21096773.1| GTPase Der [Vibrio cholerae HC-7A1]
gi|443534515|ref|ZP_21100426.1| GTPase Der [Vibrio cholerae HC-80A1]
gi|443538107|ref|ZP_21103962.1| GTPase Der [Vibrio cholerae HC-81A1]
gi|449056713|ref|ZP_21735381.1| GTP-binding protein EngA [Vibrio cholerae O1 str. Inaba G4222]
gi|26006742|sp|Q9KTW7.1|DER_VIBCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|172047436|sp|A5F3E6.1|DER_VIBC3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783177|sp|C3LT16.1|DER_VIBCM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|9655209|gb|AAF93928.1| GTP-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121550030|gb|EAX60046.1| GTP-binding protein [Vibrio cholerae 2740-80]
gi|121631521|gb|EAX63891.1| GTP-binding protein [Vibrio cholerae V52]
gi|126512192|gb|EAZ74786.1| GTP-binding protein [Vibrio cholerae NCTC 8457]
gi|126521085|gb|EAZ78308.1| GTP-binding protein [Vibrio cholerae B33]
gi|146316998|gb|ABQ21537.1| GTP-binding protein [Vibrio cholerae O395]
gi|227008830|gb|ACP05042.1| GTP-binding protein [Vibrio cholerae M66-2]
gi|227012587|gb|ACP08797.1| GTP-binding protein [Vibrio cholerae O395]
gi|229344542|gb|EEO09516.1| GTP-binding protein EngA [Vibrio cholerae RC9]
gi|229350670|gb|EEO15611.1| GTP-binding protein EngA [Vibrio cholerae B33]
gi|229357846|gb|EEO22763.1| GTP-binding protein EngA [Vibrio cholerae BX 330286]
gi|229371296|gb|ACQ61719.1| GTP-binding protein EngA [Vibrio cholerae MJ-1236]
gi|254843605|gb|EET22019.1| GTP-binding protein EngA [Vibrio cholerae MO10]
gi|255737600|gb|EET92994.1| GTP-binding protein EngA [Vibrio cholera CIRS 101]
gi|262022907|gb|EEY41613.1| GTP-binding protein EngA [Vibrio cholerae RC27]
gi|262029046|gb|EEY47699.1| GTP-binding protein EngA [Vibrio cholerae INDRE 91/1]
gi|297543437|gb|EFH79487.1| ribosome-associated GTPase EngA [Vibrio cholerae MAK 757]
gi|340041397|gb|EGR02363.1| GTPase Der [Vibrio cholerae HCUF01]
gi|340042110|gb|EGR03075.1| GTPase Der [Vibrio cholerae HC-49A2]
gi|341624726|gb|EGS50210.1| GTPase Der [Vibrio cholerae HC-70A1]
gi|341625943|gb|EGS51364.1| GTPase Der [Vibrio cholerae HC-48A1]
gi|341626538|gb|EGS51911.1| GTPase Der [Vibrio cholerae HC-40A1]
gi|341640347|gb|EGS64937.1| GTPase Der [Vibrio cholerae HFU-02]
gi|341648039|gb|EGS72106.1| GTPase Der [Vibrio cholerae HC-38A1]
gi|356419967|gb|EHH73497.1| GTPase Der [Vibrio cholerae HC-06A1]
gi|356420915|gb|EHH74423.1| GTPase Der [Vibrio cholerae HC-21A1]
gi|356425764|gb|EHH79110.1| GTPase Der [Vibrio cholerae HC-19A1]
gi|356432147|gb|EHH85344.1| GTPase Der [Vibrio cholerae HC-23A1]
gi|356433750|gb|EHH86935.1| GTPase Der [Vibrio cholerae HC-22A1]
gi|356437500|gb|EHH90589.1| GTPase Der [Vibrio cholerae HC-28A1]
gi|356442569|gb|EHH95408.1| GTPase Der [Vibrio cholerae HC-32A1]
gi|356446970|gb|EHH99760.1| GTPase Der [Vibrio cholerae HC-43A1]
gi|356449798|gb|EHI02536.1| GTPase Der [Vibrio cholerae HC-33A2]
gi|356453169|gb|EHI05832.1| GTPase Der [Vibrio cholerae HC-61A1]
gi|356456131|gb|EHI08742.1| GTPase Der [Vibrio cholerae HC-48B2]
gi|356645824|gb|AET25879.1| GTP-binding protein EngA [Vibrio cholerae O1 str. 2010EL-1786]
gi|378794120|gb|AFC57591.1| GTP-binding protein Der [Vibrio cholerae IEC224]
gi|395920067|gb|EJH30889.1| GTPase Der [Vibrio cholerae CP1041(14)]
gi|395921533|gb|EJH32353.1| GTPase Der [Vibrio cholerae CP1032(5)]
gi|395923383|gb|EJH34194.1| GTPase Der [Vibrio cholerae CP1038(11)]
gi|395929564|gb|EJH40313.1| GTPase Der [Vibrio cholerae CP1042(15)]
gi|395932340|gb|EJH43083.1| GTPase Der [Vibrio cholerae CP1046(19)]
gi|395936512|gb|EJH47235.1| GTPase Der [Vibrio cholerae CP1048(21)]
gi|395943492|gb|EJH54166.1| GTPase Der [Vibrio cholerae HC-20A2]
gi|395946389|gb|EJH57053.1| GTPase Der [Vibrio cholerae HC-46A1]
gi|395961840|gb|EJH72150.1| GTPase Der [Vibrio cholerae HC-56A2]
gi|395963277|gb|EJH73549.1| GTPase Der [Vibrio cholerae HC-57A2]
gi|395965959|gb|EJH76095.1| GTPase Der [Vibrio cholerae HC-42A1]
gi|395974215|gb|EJH83748.1| GTPase Der [Vibrio cholerae HC-47A1]
gi|395977209|gb|EJH86628.1| GTPase Der [Vibrio cholerae CP1030(3)]
gi|395978642|gb|EJH88017.1| GTPase Der [Vibrio cholerae CP1047(20)]
gi|408009248|gb|EKG47163.1| GTPase Der [Vibrio cholerae HC-39A1]
gi|408016028|gb|EKG53589.1| GTPase Der [Vibrio cholerae HC-41A1]
gi|408035824|gb|EKG72279.1| GTPase Der [Vibrio cholerae CP1037(10)]
gi|408036560|gb|EKG72985.1| GTPase Der [Vibrio cholerae CP1040(13)]
gi|408044449|gb|EKG80367.1| GTPase Der [Vibrio Cholerae CP1044(17)]
gi|408046043|gb|EKG81764.1| GTPase Der [Vibrio cholerae CP1050(23)]
gi|408056517|gb|EKG91395.1| GTPase Der [Vibrio cholerae HC-81A2]
gi|408610760|gb|EKK84125.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1033(6)]
gi|408626831|gb|EKK99665.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A1]
gi|408639980|gb|EKL11782.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-50A2]
gi|408657812|gb|EKL28888.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-77A1]
gi|408658868|gb|EKL29926.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62A1]
gi|408847957|gb|EKL88013.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-37A1]
gi|408848885|gb|EKL88921.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-17A2]
gi|408872901|gb|EKM12109.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-62B1]
gi|408880923|gb|EKM19838.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-69A1]
gi|439975350|gb|ELP51473.1| GTP-binding protein EngA [Vibrio cholerae 4260B]
gi|443432761|gb|ELS75283.1| GTPase Der [Vibrio cholerae HC-64A1]
gi|443436586|gb|ELS82704.1| GTPase Der [Vibrio cholerae HC-65A1]
gi|443440148|gb|ELS89838.1| GTPase Der [Vibrio cholerae HC-67A1]
gi|443444242|gb|ELS97517.1| GTPase Der [Vibrio cholerae HC-68A1]
gi|443448080|gb|ELT04716.1| GTPase Der [Vibrio cholerae HC-71A1]
gi|443450854|gb|ELT11119.1| GTPase Der [Vibrio cholerae HC-72A2]
gi|443457841|gb|ELT25237.1| GTPase Der [Vibrio cholerae HC-7A1]
gi|443462299|gb|ELT33339.1| GTPase Der [Vibrio cholerae HC-80A1]
gi|443465696|gb|ELT40355.1| GTPase Der [Vibrio cholerae HC-81A1]
gi|448263881|gb|EMB01121.1| GTP-binding protein EngA [Vibrio cholerae O1 str. Inaba G4222]
Length = 494
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 291/445 (65%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR+ +P +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
+ I++ + S +F++LG+ + I+A +G G+ ++ +L P+ + + ++
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLN---PFAEQMESEQAQLEDL 176
Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
TN E IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F SGRS+++ VNKWD + + ++ +K + ++L F+ FA +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN++ + + YKRYL
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYL 441
>gi|238753871|ref|ZP_04615231.1| GTP-binding protein engA [Yersinia ruckeri ATCC 29473]
gi|238707859|gb|EEQ00217.1| GTP-binding protein engA [Yersinia ruckeri ATCC 29473]
Length = 496
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/446 (45%), Positives = 280/446 (62%), Gaps = 29/446 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT++RDALVA++PGLTRDR YG + FI+IDTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEVEGHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M Q+ AI E+DI++F+VD R GL+ D+ I LR + LV NK
Sbjct: 61 D-GTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSRQKATFLVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENI-------------LTIELPYK 166
++ + + + DFY LG+G H I+A +G G+ +E + LT E
Sbjct: 120 TDGMEPEAAAADFYSLGMGEVHPIAASHGRGVAQLIEEVMAPYMEPEAPEVELTEEEANA 179
Query: 167 KFFKKKEFTNIHSIEY--------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
++ +E EY IK+AIVG+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 AYWAAQEAEGQDPAEYEDPEEDDFDPRSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYD 239
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI + ++YILIDTAG+R+R K E +EKFSVIKTL++I ++NVV+L++
Sbjct: 240 MPGTTRDSIYIPMIRDEREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDSNVVLLVI 299
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA+ IS QD+++ FI SGRSL++ VNKWD + R +K+ ++ +L F+ FA +F
Sbjct: 300 DARDGISDQDLSLLGFILNSGRSLVIAVNKWDGMTEEARTQVKDMLELRLGFVDFARIHF 359
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + + + ESI YD S + TS +TR + A ++H P + R KL+YAH
Sbjct: 360 ISALHGSGVGNLFESILEAYDCSTKRVGTSMLTRIMQMAEEDHQPPLVRGRRVKLKYAHA 419
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++ + + YKRYL
Sbjct: 420 GGYNPPIVVIHGNQVTDLADSYKRYL 445
>gi|119476373|ref|ZP_01616724.1| predicted GTPase [marine gamma proteobacterium HTCC2143]
gi|119450237|gb|EAW31472.1| predicted GTPase [marine gamma proteobacterium HTCC2143]
Length = 466
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/420 (45%), Positives = 282/420 (67%), Gaps = 7/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVAN PGLTRDR YGE +G + FI+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKTRDALVANLPGLTRDRKYGEARVGSRRFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E ++GI M +Q+ A+ E+D + F+ D R GL D + N LR+S +P+ + NK
Sbjct: 61 TGE-EEGIDVAMAQQSMLAVDEADAVFFLCDSRAGLTAGDHALANKLRQSDKPVYYIANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ ++++ DFY+LGI + ++A +G G++N L+++L L + +++E + H
Sbjct: 120 IDGVDPNVAMADFYQLGIEKLYPMTATHGKGVRNLLDDML---LQFPDSNQEEEEQDKH- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
K+AI+G+PNVGKSTL+N LLGE RVI +D PGTTRDSI +E + Y LIDTAG
Sbjct: 176 -RGTKIAIIGRPNVGKSTLVNRLLGEERVIVFDHPGTTRDSIYIDYEREGQPYTLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E +EKFS++K LK+I +ANVV+L++DA + + QD+++ ++GR+L++
Sbjct: 235 VRRRKNVRETVEKFSIVKALKAIDDANVVVLVMDAAEGLVDQDLHLLGHAIDAGRALVIA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + + + +K ++++L F+ FA +FISA+ + ES++ Y SS+ L
Sbjct: 295 LNKWDGLDIDHKTWVKRELERRLQFIDFAEIHFISALHGTGVGHLYESVDKAYRSSMEKL 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+++T+ L A+ +H P R KLRYAH GG NPPIIVIHGN+ + Y+RYLE
Sbjct: 355 QTNKLTQILEGAVFDHAPPMINGRRIKLRYAHAGGSNPPIIVIHGNQTAKVPASYRRYLE 414
>gi|430377492|ref|ZP_19431625.1| GTP-binding protein Der [Moraxella macacae 0408225]
gi|429540629|gb|ELA08658.1| GTP-binding protein Der [Moraxella macacae 0408225]
Length = 467
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/421 (45%), Positives = 285/421 (67%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKST+FN++T SR ALVA+ GLTRDR YG+ K+FI++DTGG
Sbjct: 1 MKPVVALIGRPNVGKSTIFNQITKSRQALVADLAGLTRDRQYGDALFEDKAFIVVDTGGI 60
Query: 61 -EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
E + G + + M Q+ AI E+DI++F+VD R GLV D++I L G+P+ LV
Sbjct: 61 GEDDDGSGNIDDYMATQSYTAIHEADILVFVVDARAGLVGSDEVIAKQLHTLGKPVFLVA 120
Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
NK + ++ + +F+ LG G P +A +G GI N LE+ LT ++P +K
Sbjct: 121 NKVDGVHEASIGEFFALGFGKPFATTASHGRGITNLLEH-LTADMPSTAVEEK------- 172
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ + +K+AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE + Y+LIDTA
Sbjct: 173 APDGLKLAIIGRPNVGKSTLVNRLLGEERVVVFDMPGTTRDSIYIPFEREGQNYVLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR + E +EKFSVIKTL++I +ANVV+L++DAQ+ I+ QD++I + ++GR++++
Sbjct: 233 GVRRRGRIDEKVEKFSVIKTLQAIKDANVVVLVIDAQEGITDQDLHILGYALDAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ +++ +K +++++ NF+ + + ISA+ + SI+ Y S+++
Sbjct: 293 AINKWDNLDQDKKDWVKIDMERRFNFIPYVKIHLISALHGTGTGNLYPSIHKAYASAMLS 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+STSR+T+ L A+ H P R KLR+AH GG NPPIIV+HGN+ I N YKRYL
Sbjct: 353 ISTSRLTQILQDAVSAHQPPMVSGRRIKLRFAHMGGHNPPIIVVHGNQTGQIPNSYKRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|109899427|ref|YP_662682.1| GTP-binding protein EngA [Pseudoalteromonas atlantica T6c]
gi|123170868|sp|Q15R60.1|DER_PSEA6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|109701708|gb|ABG41628.1| small GTP-binding protein [Pseudoalteromonas atlantica T6c]
Length = 482
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/434 (45%), Positives = 282/434 (64%), Gaps = 20/434 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M Q+ AI E+D+++F+VD R GL D+ I LRK + + +V NK
Sbjct: 61 SGD-EQGIDMAMANQSLMAIDEADVVLFLVDARAGLTAADQGIAEHLRKQNKSVYVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ I+ S S DF+ LG+G+ + I+A +G G+ L + L +P + F +
Sbjct: 120 VDGIDGDSESADFFALGLGDVNQIAAAHGRGVTQLLTHTL---MPLSEQFPDMQVPEDEE 176
Query: 180 IEY---------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+ IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 177 ADEEIDAEKQLEKLLASPIKLAIVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSIFIP 236
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
E ++++Y+LIDTAG+RRR E +EKFS++KTL++I EANVV+L++DAQ+ ++ QD++
Sbjct: 237 MERDDREYVLIDTAGVRRRRSISEAVEKFSIVKTLQAIEEANVVLLVIDAQEGVTDQDLS 296
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ SGRSL+V VNKWD + + + IK + ++L F+ FA ++ISA+ N+
Sbjct: 297 LLGFVLNSGRSLVVAVNKWDGLAKDVKDEIKRELDRRLGFIDFARLHYISALHGTNVGHL 356
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
ES+ Y+S+ ++TS +TR + A +H P + R K++YAH GG NPPIIVIHG
Sbjct: 357 FESVQEAYNSATKRINTSMLTRIMDMAQADHQPPVVRGRRVKMKYAHAGGYNPPIIVIHG 416
Query: 405 NRLKYIGNDYKRYL 418
N++K + + YKRY+
Sbjct: 417 NQVKDLPDSYKRYM 430
>gi|381393552|ref|ZP_09919273.1| GTP-binding protein [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330768|dbj|GAB54406.1| GTP-binding protein [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 481
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/434 (45%), Positives = 288/434 (66%), Gaps = 20/434 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTN+RDALVA++PGLTRDR YG + FI++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTNTRDALVADFPGLTRDRKYGTATFELRQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
++GI M Q+ AI E+D+++F+VD R GL D I+ LRK +P+ +V+NK
Sbjct: 61 SGN-EQGIDARMAHQSLLAIEEADVVLFLVDARDGLTPTDIGISEHLRKQEKPVHIVVNK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
+ ++ S S DFY LG+G+ I+A +G G+ +E +L+ P K FK
Sbjct: 120 VDGLDGDSESADFYTLGMGSLLQIAAAHGRGVSKLIEAVLS---PLDKIFKDMHVAPPSI 176
Query: 173 EFTNIHSIEY--------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
E I + E IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 177 EEETIDAQEKLKQLQAQPIKLAIVGKPNVGKSTLTNRILGEERVVVYDLPGTTRDSIFIP 236
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
+ + ++Y+LIDTAG+R+R K +V+EKFS++KTL++I EANVV+L++DA++ ++ QD++
Sbjct: 237 MQRDGREYVLIDTAGVRKRKKVSDVVEKFSIVKTLQAIEEANVVLLVVDAREGVAEQDLS 296
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ FI SGRSL++ VNKWD + ++ + +K + ++L F+ FA +FISA+ + +
Sbjct: 297 LLGFILNSGRSLVIAVNKWDGLDNHVKDQVKKELDRRLGFVDFARLHFISALHGSGVGHL 356
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
ES+ Y+S+ ++TS +T + A +H P + R K++YAH GG NPP+IVIHG
Sbjct: 357 FESVQEAYESATKRINTSMLTDIMEMAQHDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHG 416
Query: 405 NRLKYIGNDYKRYL 418
N++K + + YKR+L
Sbjct: 417 NQVKDLPDAYKRFL 430
>gi|118594978|ref|ZP_01552325.1| GTP-binding protein EngA [Methylophilales bacterium HTCC2181]
gi|118440756|gb|EAV47383.1| GTP-binding protein EngA [Methylophilales bacterium HTCC2181]
Length = 474
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/416 (48%), Positives = 281/416 (67%), Gaps = 8/416 (1%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKS+LFNRLT SRDALVA+ PGLTRDRHYG+ I FI++DTGGFEP+
Sbjct: 4 VAIVGRPNVGKSSLFNRLTKSRDALVADLPGLTRDRHYGKITIEDAQFILVDTGGFEPKK 63
Query: 65 KKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENI 124
K GI +M QT AI E D+I+F+VDGR+GL D+ I + +RK+ + +L+INK+E +
Sbjct: 64 KIGIAKKMALQTLLAIDECDVILFVVDGREGLHPIDQHIADVIRKNDKEKILLINKTEGM 123
Query: 125 NSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYI 183
I DFY LG N IS+ +G G+ E L ++L ++ + F
Sbjct: 124 QHEIVGADFYSLGFKNILSISSAHGEGVGLLKE--LLVDLNHQDSEPQSIFKGAP----- 176
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRR 243
K+ IVG+PNVGKSTL+N+L+GE R I +D GTTRD++ F++N +++L DTAGIR++
Sbjct: 177 KITIVGRPNVGKSTLVNALVGEERFIVFDQAGTTRDAVSVDFDFNGDRFVLTDTAGIRKK 236
Query: 244 NKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKW 303
K FE +EKFSV+KTL ++ ++V+IL++D+ I+ QD+++ FI E+G+S+++ +NKW
Sbjct: 237 GKVFETVEKFSVLKTLAAVESSDVIILVIDSSGGIATQDMHLIGFILETGKSIVIAINKW 296
Query: 304 DSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSR 363
DS+ +R+ IKN+I KL F++FA FISA+K + M S+ Y+SS ST +
Sbjct: 297 DSVSAYEREAIKNDIDLKLPFVNFAEKVFISALKETGLKGLMRSVIKAYESSSRKFSTPQ 356
Query: 364 ITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
I L +AI +H P K IRPKL++AHQGG NPP I+IHGN L I DY RYLE
Sbjct: 357 INEVLANAILSHQPKIIKGIRPKLKFAHQGGLNPPTIIIHGNHLTDIRKDYVRYLE 412
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P + +VGRPNVGKSTL N L +V + G TRD + F++ DT G
Sbjct: 176 PKITIVGRPNVGKSTLVNALVGEERFIVFDQAGTTRDAVSVDFDFNGDRFVLTDTAGIR- 234
Query: 63 EVKKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
KKG + E + +T A+ SD+II ++D G+ QD + F+ ++G+ IV+
Sbjct: 235 --KKGKVFETVEKFSVLKTLAAVESSDVIILVIDSSGGIATQDMHLIGFILETGKSIVIA 292
Query: 118 INK--------SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKF 168
INK E I + I L + ISAL G+K + +++ E +KF
Sbjct: 293 INKWDSVSAYEREAIKNDIDLKLPFVNFAEKVFISALKETGLKGLMRSVIKAYESSSRKF 352
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
I VAIVG+PNVGKS+L N L + D PG TRD + ++IL+DT G
Sbjct: 2 ISVAIVGRPNVGKSSLFNRLTKSRDALVADLPGLTRDRHYGKITIEDAQFILVDTGGFEP 61
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
+ K I K ++TL +I E +V++ ++D ++ + D +IA+ I ++ + I+ +NK
Sbjct: 62 KKKIG--IAKKMALQTLLAIDECDVILFVVDGREGLHPIDQHIADVIRKNDKEKILLINK 119
Query: 303 WDSIIH 308
+ + H
Sbjct: 120 TEGMQH 125
>gi|88810613|ref|ZP_01125870.1| GTP-binding protein EngA [Nitrococcus mobilis Nb-231]
gi|88792243|gb|EAR23353.1| GTP-binding protein EngA [Nitrococcus mobilis Nb-231]
Length = 476
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/428 (46%), Positives = 282/428 (65%), Gaps = 20/428 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M+PV+VLVGRPNVGKSTLFN LT SRDALVA++P LTRDR YG G IG ++I++DTGG
Sbjct: 1 MEPVIVLVGRPNVGKSTLFNCLTRSRDALVADFPELTRDRQYGRGRIGPCAYIVVDTGGM 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ I + Q +QAI ++D ++F+VD R G D+ + LR G+ + LV NK
Sbjct: 61 G-QGNGAISEGVQAQARQAIAQADAVLFLVDARSGPTAADEALAGELRAQGKQLFLVPNK 119
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENIL---------TIELPYKKFFK 170
+ +++ + + DFY LG+G+PH I+A +G G+ + ++L +E PY++
Sbjct: 120 VDGLDARVVAADFYTLGLGDPHPIAAAHGTGVARLMASVLQGMTAAVNEVVEPPYRR--- 176
Query: 171 KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
++E I+VAIVG+PNVGKSTLIN LLGE RV+ +D PGTTRDSI FE +
Sbjct: 177 ------DTAVERIRVAIVGRPNVGKSTLINRLLGEERVLVHDQPGTTRDSIFIPFERDGF 230
Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
Y LIDTAG+RRR++ +E +EKFS IKTL+++ A VVILLLDA ++I+ QD+ I ++
Sbjct: 231 AYTLIDTAGMRRRSRVYEAVEKFSAIKTLQAVTAAQVVILLLDAHESITEQDVRIIGYVL 290
Query: 291 ESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
++GR+L++ VNKWD + ++R+ I+ +++KL FL FA FISA+ + ++
Sbjct: 291 DAGRALVLAVNKWDGLEPSRREQIRRGLERKLGFLDFAKLYFISALYGTGVGLLYGAVQQ 350
Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYI 410
Y SS L T ++ R L A+ H P + R KLRYAHQGG+NPP+IVIHGN+ +
Sbjct: 351 AYASSCRKLDTPQLNRILTEAVAAHQPPLVRGRRVKLRYAHQGGRNPPVIVIHGNQTARL 410
Query: 411 GNDYKRYL 418
+ Y+RYL
Sbjct: 411 TSAYRRYL 418
>gi|410627445|ref|ZP_11338184.1| GTP-binding protein [Glaciecola mesophila KMM 241]
gi|410152937|dbj|GAC24953.1| GTP-binding protein [Glaciecola mesophila KMM 241]
Length = 482
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/434 (45%), Positives = 282/434 (64%), Gaps = 20/434 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGLQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M Q+ AI E+D+++F+VD R GL D+ I + LRK + + +V NK
Sbjct: 61 SGD-EQGIDMAMANQSLMAIDEADVVLFLVDARAGLTAADQGIADHLRKQNKSVYVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ I+ S S DF+ LG+G+ + I+A +G G+ L + L +P + F +
Sbjct: 120 VDGIDGDSESADFFALGLGDVNQIAAAHGRGVTQLLTHTL---MPLSEQFPDMQVPEDEE 176
Query: 180 IEY---------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+ IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDSI
Sbjct: 177 ADEEIDAEKQLEKLLASPIKLAIVGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSIFIP 236
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
E + ++Y+LIDTAG+RRR E +EKFS++KTL++I EANVV+L++DAQ+ ++ QD++
Sbjct: 237 MERDGREYVLIDTAGVRRRRSISEAVEKFSIVKTLQAIEEANVVLLVIDAQEGVTDQDLS 296
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ SGRSL+V VNKWD + + + IK + ++L F+ FA ++ISA+ N+
Sbjct: 297 LLGFVLNSGRSLVVAVNKWDGLAKDVKDEIKRELDRRLGFIDFARLHYISALHGTNVGHL 356
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
ES+ Y+S+ ++TS +TR + A +H P + R K++YAH GG NPPIIVIHG
Sbjct: 357 FESVQEAYNSATKRINTSMLTRIMDMAQADHQPPVVRGRRVKMKYAHAGGYNPPIIVIHG 416
Query: 405 NRLKYIGNDYKRYL 418
N++K + + YKRY+
Sbjct: 417 NQVKDLPDSYKRYM 430
>gi|417950299|ref|ZP_12593423.1| GTP-binding protein Der [Vibrio splendidus ATCC 33789]
gi|342806778|gb|EGU41990.1| GTP-binding protein Der [Vibrio splendidus ATCC 33789]
Length = 493
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 289/446 (64%), Gaps = 33/446 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAQLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D I LR+ +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFK--------- 170
+ I+ + S DF++LG+ + + I+A +G G+ ++ L P+ + K
Sbjct: 120 VDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN---PFAEALKAEQGEISDL 176
Query: 171 ------------------KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
++EF + + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TEFEDEEAEQVDFTEEEAEQEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 235
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI + ++Y+LIDTAG+RRR E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 236 MPGTTRDSIYIPMSRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAVEDANVVLLVI 295
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F +GRS+++ VNKWD + ++ ++ +K + ++L F+ FA +F
Sbjct: 296 DARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHF 355
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 356 ISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHA 415
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPIIVIHGN+++ + + YKR+L
Sbjct: 416 GGYNPPIIVIHGNQVRDLPDSYKRFL 441
>gi|83647146|ref|YP_435581.1| GTP-binding protein EngA [Hahella chejuensis KCTC 2396]
gi|123531965|sp|Q2SDW8.1|DER_HAHCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|83635189|gb|ABC31156.1| predicted GTPase [Hahella chejuensis KCTC 2396]
Length = 472
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/420 (43%), Positives = 279/420 (66%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNR+T SRDA+VAN PGLTRDR YGEG + K +I++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRMTRSRDAIVANLPGLTRDRKYGEGELEGKHYIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E ++GI M Q+ A+ E+D+++F+VD + G+ D++I LR G+P +LV+NK
Sbjct: 61 TGE-EQGIDAAMAGQSFTAMNEADVVLFVVDAQAGVTPADEMIAKELRVRGKPTILVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + ++ DF+ +G +A + G+++ LE L + F ++E
Sbjct: 120 IDGMQPEVAAADFFAMGFQEYMYTAAAHNRGVRSLLEKAL-------EPFPEQEPLEGED 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++ I+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDS+ +E ++Y LIDTAG
Sbjct: 173 DSGIRIGIIGRPNVGKSTLVNRLLGEDRVVVFDQPGTTRDSVYIPYERLGERYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E +EKFS++KTL++I +A+VV+L+LDA++ I QD+++ F E+GR+L++
Sbjct: 233 VRRRKNVSEAVEKFSIVKTLQAIKDAHVVVLVLDAREGIVDQDLHLLGFAIEAGRALVLA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + + + ++ I +++ F+ +A +FISA+ + ES++ +DS++
Sbjct: 293 INKWDGMSQDDKDEVRREIDRRMGFVEYAQIHFISALHGTGVGHLYESVHECFDSAMAKW 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+++T L A+ H P R KLRYAHQGG NPP+I++HGN+ + N YKRYLE
Sbjct: 353 STNQLTTLLEDAVSQHQPPMVNGRRIKLRYAHQGGSNPPLIIVHGNQTDALPNSYKRYLE 412
>gi|126668584|ref|ZP_01739538.1| GTP-binding protein EngA [Marinobacter sp. ELB17]
gi|126626989|gb|EAZ97632.1| GTP-binding protein EngA [Marinobacter sp. ELB17]
Length = 474
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/420 (46%), Positives = 285/420 (67%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M V+ LVGRPNVGKSTLFN++T SRDALVA++PGLTRDR YGEG + FI+IDTGG
Sbjct: 1 MNLVIALVGRPNVGKSTLFNQMTRSRDALVADFPGLTRDRKYGEGNYENQRFIVIDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M KQ+ QA+ E+DI++FIVDGR G++ D+++ + LR+SG LVINK
Sbjct: 61 MGD-ELGLDAAMAKQSLQAVEEADIVLFIVDGRAGVMPGDQVLADQLRRSGTQAHLVINK 119
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + + ++ DFY LG + I+A + G+++ LE I LP + + + H+
Sbjct: 120 TDGQDPNLVASDFYALGFQSQFRIAASHNRGVRSMLE----ILLPTPE--EDADIDGAHN 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++ IVG+PNVGKSTL+N +LGE RV+ YD PGTTRDSI +E ++Y LIDTAG
Sbjct: 174 HPGIRIGIVGRPNVGKSTLVNRMLGEERVVVYDLPGTTRDSIYIPYERLGQEYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR EV+EKFS+IKTL++I +A+VVIL++DA++ + QD+++ F+ +GRSL++
Sbjct: 234 VRRRKNVREVVEKFSIIKTLQAIDDAHVVILVIDAREGLVDQDMHLMGFVLSAGRSLVIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + R +K I+++L+FL +A ++ISA+ + + +S+N Y+S++
Sbjct: 294 INKWDGMNGEDRDKVKEQIRRRLDFLDYADKHYISALHGSGVGVMYQSVNACYESAMAKW 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+R+T L AI H P R KLRYAHQGG NPP IV+HGN+ + YKRYLE
Sbjct: 354 PTNRLTTILEDAIAQHQPPMVHGRRIKLRYAHQGGSNPPTIVVHGNQTDSLPGAYKRYLE 413
>gi|148979611|ref|ZP_01815616.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3]
gi|145961696|gb|EDK26993.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3]
Length = 493
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 289/446 (64%), Gaps = 33/446 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAQLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D I LR+ +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFK--------- 170
+ I+ + S DF++LG+ + + I+A +G G+ ++ L P+ + K
Sbjct: 120 VDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN---PFAEALKAEQGKISDL 176
Query: 171 ------------------KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
++EF + + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TEFEDEEAEQVDFTEEEAEQEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 235
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI + ++Y+LIDTAG+RRR E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 236 MPGTTRDSIYIPMSRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAVEDANVVLLVI 295
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F +GRS+++ VNKWD + ++ ++ +K + ++L F+ FA +F
Sbjct: 296 DARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHF 355
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH
Sbjct: 356 ISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHA 415
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPIIVIHGN+++ + + YKR+L
Sbjct: 416 GGYNPPIIVIHGNQVRDLPDSYKRFL 441
>gi|375264590|ref|YP_005022033.1| GTP-binding protein Der [Vibrio sp. EJY3]
gi|369839914|gb|AEX21058.1| GTP-binding protein Der [Vibrio sp. EJY3]
Length = 498
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/446 (43%), Positives = 293/446 (65%), Gaps = 29/446 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G++ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEEHEFIVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LRK +P +LV+N
Sbjct: 61 IDG-TEEGVETKMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKIEKPAMLVVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLE--------NILTIELPYKKFFK 170
K + I++ + DF++LG+ + + I+A +G G+ LE ++L E +
Sbjct: 120 KIDGIDADAACADFWQLGVDDMYQIAAAHGRGVTALLERALAPFFDDLLGSESEEGEIED 179
Query: 171 KKEFTNIHSI------------------EYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
EF + + + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 LTEFEDAEILEEEYSEEEAEQEFQRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 239
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI E + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++
Sbjct: 240 MPGTTRDSIYIPMERDGREYVLIDTAGVRRRGRINETVEKFSVVKTLKAVEDANVVLLVI 299
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F +GRS+++ VNKWD + ++ ++ +K + ++L F+ FA +F
Sbjct: 300 DARENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNDVKENVKKELDRRLGFVDFARIHF 359
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ESI Y S+ + TS +TR + A+ +H P + R KL+YAH
Sbjct: 360 ISALHGTGVGHLFESIQEAYKSATTRVGTSVLTRIMKMAVDDHQPPMIRGRRIKLKYAHA 419
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN ++ + + YKRYL
Sbjct: 420 GGYNPPIVVIHGNMVRELPDSYKRYL 445
>gi|399544725|ref|YP_006558033.1| GTPase Der [Marinobacter sp. BSs20148]
gi|399160057|gb|AFP30620.1| GTPase Der [Marinobacter sp. BSs20148]
Length = 474
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/420 (46%), Positives = 285/420 (67%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M V+ LVGRPNVGKSTLFN++T SRDALVA++PGLTRDR YGEG + FI+IDTGG
Sbjct: 1 MNLVIALVGRPNVGKSTLFNQMTRSRDALVADFPGLTRDRKYGEGNYENQRFIVIDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M KQ+ QA+ E+DI++FIVDGR G++ D+++ + LR+SG LVINK
Sbjct: 61 MGD-ELGLDAAMAKQSLQAVEEADIVLFIVDGRAGVMPGDQVLADQLRRSGTQAHLVINK 119
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + + ++ DFY LG + I+A + G+++ LE I LP + + + H+
Sbjct: 120 TDGQDPNLVASDFYALGFQSQFRIAASHNRGVRSMLE----ILLPTPE--EDADVDGAHN 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++ IVG+PNVGKSTL+N +LGE RV+ YD PGTTRDSI +E ++Y LIDTAG
Sbjct: 174 HPGIRIGIVGRPNVGKSTLVNRMLGEERVVVYDLPGTTRDSIYIPYERLGQEYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR EV+EKFS+IKTL++I +A+VVIL++DA++ + QD+++ F+ +GRSL++
Sbjct: 234 VRRRKNVREVVEKFSIIKTLQAIDDAHVVILVIDAREGLVDQDMHLMGFVLSAGRSLVIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + R +K I+++L+FL +A ++ISA+ + + +S+N Y+S++
Sbjct: 294 INKWDGMNGEDRDKVKEQIRRRLDFLDYADKHYISALHGSGVGVMYQSVNACYESAMAKW 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+R+T L AI H P R KLRYAHQGG NPP IV+HGN+ + YKRYLE
Sbjct: 354 PTNRLTTILEDAIAQHQPPMVHGRRIKLRYAHQGGSNPPTIVVHGNQTDSLPGAYKRYLE 413
>gi|322831770|ref|YP_004211797.1| ribosome-associated GTPase EngA [Rahnella sp. Y9602]
gi|384256886|ref|YP_005400820.1| GTP-binding protein Der [Rahnella aquatilis HX2]
gi|321166971|gb|ADW72670.1| ribosome-associated GTPase EngA [Rahnella sp. Y9602]
gi|380752862|gb|AFE57253.1| GTP-binding protein Der [Rahnella aquatilis HX2]
Length = 494
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/446 (45%), Positives = 284/446 (63%), Gaps = 32/446 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I FII+DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTKTRDALVADFPGLTRDRKYGRAEIEGNEFIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M Q+ AI E+DI++F+VD R GL+ D+ I LR + LV NK
Sbjct: 61 D-GTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSREKATFLVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
++ ++ S + DFY LG+G+ + I+A +G G+ +E++L +P+
Sbjct: 120 TDGLDPDSATGDFYSLGLGDVYAIAASHGRGVTQLIEHVL---IPFVGEKPEEVELTEEE 176
Query: 166 --KKFFKKKEFTNIHSIE-----------YIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
++ ++E T E IK+AIVG+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 ANAAYWAEQEATGDEIPEDEEDNFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYD 236
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI + ++Y+LIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVMLVI 296
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++ IS QD+++ FI SGRSL++ VNKWD + R +K+ + +L F+ FA +F
Sbjct: 297 DAREGISDQDLSLLGFILNSGRSLVIVVNKWDGMSEEARAQVKDQLDLRLGFVDFARIHF 356
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + + + ES+N Y + +STS +TR + A +H P R KL+YAH
Sbjct: 357 ISALHGSGVGNLFESVNEAYTCATTRVSTSLLTRIMQMAADDHQPPLVNGRRVKLKYAHA 416
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++K + + YKRYL
Sbjct: 417 GGYNPPIVVIHGNQVKDLADSYKRYL 442
>gi|378580965|ref|ZP_09829617.1| 50S ribosome biogenesis/stability factor [Pantoea stewartii subsp.
stewartii DC283]
gi|377816444|gb|EHT99547.1| 50S ribosome biogenesis/stability factor [Pantoea stewartii subsp.
stewartii DC283]
Length = 494
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 284/445 (63%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R G++ D+ I LR + LV NK
Sbjct: 61 D-GTEDGVETRMAEQSLLAIEEADVVLFMVDARAGMMPADQQIAKHLRARQKATFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE L LP+ + E T
Sbjct: 120 TDGLDPDQAIVDFYSLGLGEIYAIAASHGRGVTSLLETAL---LPWMEKVDPVEVTEEDE 176
Query: 180 IEY--------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
E IK+AIVG+PNVGKSTL N +LGE+RV+ YD
Sbjct: 177 NEAYWAALAAEENGEEEEEEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI E ++++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMERDDREYVLIDTAGVRKRGKITDTVEKFSVIKTLQAIEDANVVMLVID 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A+ IS QD+++ FI SGRSL++ VNKWD + R +K + +L F+ FA +FI
Sbjct: 297 ARAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARVHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + + + ES+ YD S ++TS +TR + A ++H P + R KL+YAH G
Sbjct: 357 SALHGSGVGNLFESVTEAYDCSTKRVNTSLLTRIMNMAAEDHQPPLVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPI+VIHGN++K + + YKRYL
Sbjct: 417 GYNPPIVVIHGNQVKDLPDSYKRYL 441
>gi|113969576|ref|YP_733369.1| GTP-binding protein EngA [Shewanella sp. MR-4]
gi|117919682|ref|YP_868874.1| GTP-binding protein EngA [Shewanella sp. ANA-3]
gi|123029832|sp|Q0HKV5.1|DER_SHESM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225858|sp|A0KUJ9.1|DER_SHESA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|113884260|gb|ABI38312.1| small GTP-binding protein [Shewanella sp. MR-4]
gi|117612014|gb|ABK47468.1| small GTP-binding protein [Shewanella sp. ANA-3]
Length = 488
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/438 (44%), Positives = 281/438 (64%), Gaps = 24/438 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
+ I++ S +F+ LG+G + ++A G G+ N +E LT PY + ++ E
Sbjct: 120 IDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALT---PYAEAMGIERQGEEEE 176
Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+ +Y IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
I E + ++Y++IDTAG+RRR+K EVIEKFSVIKTLK++ +ANVV+L++DA++ I+
Sbjct: 237 IYIPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGIAE 296
Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA+
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416
Query: 401 VIHGNRLKYIGNDYKRYL 418
VIHGN++ + + YKRY+
Sbjct: 417 VIHGNQVSKLPDSYKRYM 434
>gi|226939618|ref|YP_002794691.1| GTP-binding protein engA [Laribacter hongkongensis HLHK9]
gi|226714544|gb|ACO73682.1| GTP-binding protein engA [Laribacter hongkongensis HLHK9]
Length = 415
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/374 (49%), Positives = 260/374 (69%), Gaps = 10/374 (2%)
Query: 47 IGKKSFIIIDTGGFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNF 106
+G K ++++DTGGFEP V GIMHEM +QT QA+ E+D +IF+VD R GL QDK+I N
Sbjct: 4 VGGKPYLVVDTGGFEPVVDSGIMHEMARQTLQAVDEADAVIFLVDARAGLTPQDKIIANQ 63
Query: 107 LRKSGQPIVLVINKSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY 165
LR+ G+P+ LV+NK+E ++ ++ + +FYELG+ P IS +G G++ ++ +L P+
Sbjct: 64 LRQIGRPVFLVVNKAEGMSRAMVVAEFYELGLDEPWSISGAHGEGVRELMDEVLA---PF 120
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ +E T+ H K AI+G+PNVGKSTL+N++LGE RVI +D PGTTRDSI F
Sbjct: 121 PD--ESEEETSRHP----KFAIIGRPNVGKSTLVNAILGEERVIAFDHPGTTRDSIYIDF 174
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E K Y +IDTAG+RRR K E IEKFSV+KTL++I +ANV +L+LDA ++S QD +
Sbjct: 175 EREGKTYTIIDTAGVRRRAKIDESIEKFSVVKTLQAIEDANVCVLVLDAALDVSDQDATL 234
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
A F E+GR+L+V VNKWD QR IK +I +KL+FL FA +++ISA+K +
Sbjct: 235 AGFALEAGRALVVAVNKWDDCDEEQRINIKRSIARKLHFLEFAKYHYISALKGQGVADLF 294
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+SI+ Y +++I + T ++TRAL AI+ P LIRPK+RYAHQGG NPP++V+HGN
Sbjct: 295 KSIDQAYHAAMIKMPTPKLTRALQVAIERQAPPMMGLIRPKMRYAHQGGMNPPVVVVHGN 354
Query: 406 RLKYIGNDYKRYLE 419
L + + Y RYLE
Sbjct: 355 ALDKLPDSYTRYLE 368
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P ++GRPNVGKSTL N + + ++PG TRD Y + K++ IIDT G
Sbjct: 132 PKFAIIGRPNVGKSTLVNAILGEERVIAFDHPGTTRDSIYIDFEREGKTYTIIDTAGVRR 191
Query: 63 EVK--KGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
K + I +T QAI ++++ + ++D + +QD + F ++G+ +V+ +NK
Sbjct: 192 RAKIDESIEKFSVVKTLQAIEDANVCVLVLDAALDVSDQDATLAGFALEAGRALVVAVNK 251
Query: 121 SE--------NINSSISLDFYELGIGNPHIISALYGNGIKNFLENI 158
+ NI SI+ + L H ISAL G G+ + ++I
Sbjct: 252 WDDCDEEQRINIKRSIARKLHFLEFAKYHYISALKGQGVADLFKSI 297
>gi|259907722|ref|YP_002648078.1| GTP-binding protein EngA [Erwinia pyrifoliae Ep1/96]
gi|385785498|ref|YP_005816607.1| GTP-binding protein EngA [Erwinia sp. Ejp617]
gi|387870493|ref|YP_005801863.1| GTP-binding protein engA [Erwinia pyrifoliae DSM 12163]
gi|224963344|emb|CAX54829.1| GTP-binding protein [Erwinia pyrifoliae Ep1/96]
gi|283477576|emb|CAY73492.1| GTP-binding protein engA [Erwinia pyrifoliae DSM 12163]
gi|310764770|gb|ADP09720.1| GTP-binding protein EngA [Erwinia sp. Ejp617]
Length = 498
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/449 (44%), Positives = 286/449 (63%), Gaps = 35/449 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M +Q+ AI E+D+++F+VD R GL+ D I LR +P +V NK
Sbjct: 61 DGN-EEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADVAIAKHLRSRQKPTFIVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
++ +++ S +DF+ LG+G H I+A +G G+ + LE +L LP+
Sbjct: 120 TDGLDADSAVVDFWSLGLGEIHPIAASHGRGVTSLLELVL---LPWMDEVAPERELTEEE 176
Query: 170 -------------------KKKEFTNIHSIEY-IKVAIVGKPNVGKSTLINSLLGENRVI 209
+ E + + ++ IK+AIVG+PNVGKSTL N +LGE+RV+
Sbjct: 177 ENEAYWAALAAKEAKANGEETAEEDDFNPLDLPIKLAIVGRPNVGKSTLTNRILGEDRVV 236
Query: 210 TYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVI 269
+D PGTTRDSI E + ++YILIDTAG+R+R K E +EKFSVIKTLK+I +ANVV+
Sbjct: 237 VFDMPGTTRDSIYIPMERDGREYILIDTAGVRKRGKVTETVEKFSVIKTLKAIEDANVVM 296
Query: 270 LLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAM 329
L++DA + IS QD+++ FI SGRSL++ VNKWD + R +K + +L F+ FA
Sbjct: 297 LVIDAHEGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKEALDYRLGFIDFAR 356
Query: 330 FNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRY 389
+FISA+ + + + ES+ YD S ++TS +TR + A +H P + R KL+Y
Sbjct: 357 IHFISALHGSGVGNLFESVTEAYDCSTRRVNTSMLTRIMHMAADDHQPPLVRSRRVKLKY 416
Query: 390 AHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
AH GG NPPI+VIHGN++K + + YKRYL
Sbjct: 417 AHAGGYNPPIVVIHGNQVKDLPDSYKRYL 445
>gi|24374819|ref|NP_718862.1| 50S ribosome assembly GTPase Der [Shewanella oneidensis MR-1]
gi|37999695|sp|Q8EC36.1|DER_SHEON RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|24349505|gb|AAN56306.1| 50S ribosome assembly GTPase Der [Shewanella oneidensis MR-1]
Length = 487
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/438 (44%), Positives = 281/438 (64%), Gaps = 24/438 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
+ I++ S +F+ LG+G + ++A G G+ N +E LT PY + ++ E
Sbjct: 120 IDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALT---PYAEAMGIERQGEEEE 176
Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+ +Y IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
I E + ++Y++IDTAG+RRR+K EVIEKFSVIKTLK++ +ANVV+L++DA++ ++
Sbjct: 237 IYIPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296
Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA+
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416
Query: 401 VIHGNRLKYIGNDYKRYL 418
VIHGN++ + + YKRY+
Sbjct: 417 VIHGNQVSKLPDSYKRYM 434
>gi|192362315|ref|YP_001981972.1| GTP-binding protein EngA [Cellvibrio japonicus Ueda107]
gi|238692428|sp|B3PDM5.1|DER_CELJU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|190688480|gb|ACE86158.1| GTP-binding protein EngA [Cellvibrio japonicus Ueda107]
Length = 466
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/422 (47%), Positives = 282/422 (66%), Gaps = 12/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTNSRDALVA+YPGLTRDR YGE + + FI+IDTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTNSRDALVADYPGLTRDRKYGEARLENRRFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E ++GI M Q+ AI E+DI++FIVD R GL D+LI LR + +V NK
Sbjct: 61 SGE-EEGIDSAMAGQSLLAIQEADIVLFIVDSRVGLNPADELIARHLRVHNKKTYVVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNI 177
+ ++ I+L FYELG+G H +A +G G+++ +E++L E+P ++ ++ E T I
Sbjct: 120 IDGMDPDIALAPFYELGMGEVHPTTATHGRGVRSLMEDVLAEYPEIPEEE--QQGEATGI 177
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
K+AIVG+PNVGKSTL+N LLGE+RV+ YD PGTTRDSI + +K Y LIDT
Sbjct: 178 ------KIAIVGRPNVGKSTLVNRLLGEDRVVVYDQPGTTRDSIYINYTRFDKPYTLIDT 231
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR +EKFS++KT+++I +ANVVIL++DA + I QD+++ E+GR+L+
Sbjct: 232 AGVRRRKNIDLAVEKFSIVKTMQAIADANVVILVMDASEGIVEQDLHLMGTAIEAGRALV 291
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ +NKWD + + + +KN ++++L F+ FA +FISA+ + + +SI Y S+
Sbjct: 292 IALNKWDGLDESHKYYVKNELERRLRFVDFANIHFISALHGTGVGNLYKSIEQAYQSATD 351
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
ST+ +TR L A++ H P R KLRYAH GG NPP+I++HGN+ + Y +Y
Sbjct: 352 RFSTNYLTRILQDAVREHQPPMINGRRIKLRYAHPGGHNPPVIIVHGNQTDDVPGHYVKY 411
Query: 418 LE 419
LE
Sbjct: 412 LE 413
>gi|344942374|ref|ZP_08781662.1| GTP-binding protein engA [Methylobacter tundripaludum SV96]
gi|344263566|gb|EGW23837.1| GTP-binding protein engA [Methylobacter tundripaludum SV96]
Length = 465
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/419 (47%), Positives = 277/419 (66%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN LT SRDALVA++ GLTRDR YG +G + +++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNYLTRSRDALVADFSGLTRDRQYGRVKLGDRPCLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + GI KQ + A+ E+DI+ F+VD R+GL DK+I + LRK +P++LV NK
Sbjct: 61 ADDAE-GIESFARKQVQVALEEADIVFFMVDAREGLSASDKVIADTLRKLQKPVILVTNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++S + DFY L +G P I+A +G GI LE + + P K E HS
Sbjct: 120 VDGLDASTAASDFYSLALGEPVKIAASHGKGIPELLEKVNQLLPP-----DKGEVEEAHS 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I +A+VG+PNVGKSTL+N LLGE RVI +D PGTTRDSI FE N KK+ LIDTAG
Sbjct: 175 --GIGIAVVGRPNVGKSTLVNRLLGEERVIVFDEPGTTRDSIYIPFERNGKKFTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR+K E IEKFSVIK+L++I +ANVVI L+DA++ I+ QD ++ + E+GR+LI+
Sbjct: 233 MRRRSKIAETIEKFSVIKSLQAIEKANVVIYLIDAREGITDQDAHLLGLVLEAGRALIIG 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD I +Q+ I + KL+FL FA + ISA+ + + + + +Y ++++ +
Sbjct: 293 LNKWDGISADQKATIHRQLDVKLSFLEFAEKHPISALHGSGVGKMFDVVQQLYAAAMLDM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST +TR L A H P R KL+YAHQGG+NPPI+VIHG + + YKRYL
Sbjct: 353 STPVLTRILKEATTAHQPPIVNSRRVKLKYAHQGGRNPPIVVIHGVQTDSLPESYKRYL 411
>gi|262192496|ref|ZP_06050647.1| GTP-binding protein EngA [Vibrio cholerae CT 5369-93]
gi|422921984|ref|ZP_16955186.1| GTPase Der [Vibrio cholerae BJG-01]
gi|262031655|gb|EEY50242.1| GTP-binding protein EngA [Vibrio cholerae CT 5369-93]
gi|341647349|gb|EGS71432.1| GTPase Der [Vibrio cholerae BJG-01]
Length = 494
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 290/445 (65%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR+ +P +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
+ I++ + S +F++LG+ + I+A +G G+ ++ L P+ + + ++
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGTLIDRALN---PFAEQMESEQAQLEDL 176
Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
TN E IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F SGRS+++ VNKWD + + ++ +K + ++L F+ FA +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN++ + + YKRYL
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYL 441
>gi|114046809|ref|YP_737359.1| GTP-binding protein EngA [Shewanella sp. MR-7]
gi|123131595|sp|Q0HX53.1|DER_SHESR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|113888251|gb|ABI42302.1| small GTP-binding protein [Shewanella sp. MR-7]
Length = 488
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/438 (44%), Positives = 281/438 (64%), Gaps = 24/438 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
+ I++ S +F+ LG+G + ++A G G+ N +E LT PY + ++ E
Sbjct: 120 IDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALT---PYAEAMGIERQGEEEE 176
Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+ +Y IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
I E + ++Y++IDTAG+RRR+K EVIEKFSVIKTLK++ +ANVV+L++DA++ ++
Sbjct: 237 IYIPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296
Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA+
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416
Query: 401 VIHGNRLKYIGNDYKRYL 418
VIHGN++ + + YKRY+
Sbjct: 417 VIHGNQVSKLPDSYKRYM 434
>gi|153828302|ref|ZP_01980969.1| GTP-binding protein [Vibrio cholerae 623-39]
gi|254285481|ref|ZP_04960445.1| GTP-binding protein [Vibrio cholerae AM-19226]
gi|421350586|ref|ZP_15800951.1| GTPase Der [Vibrio cholerae HE-25]
gi|422306253|ref|ZP_16393435.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1035(8)]
gi|422909271|ref|ZP_16943920.1| GTPase Der [Vibrio cholerae HE-09]
gi|424658624|ref|ZP_18095880.1| GTPase Der [Vibrio cholerae HE-16]
gi|148876256|gb|EDL74391.1| GTP-binding protein [Vibrio cholerae 623-39]
gi|150424343|gb|EDN16280.1| GTP-binding protein [Vibrio cholerae AM-19226]
gi|341635418|gb|EGS60134.1| GTPase Der [Vibrio cholerae HE-09]
gi|395951031|gb|EJH61645.1| GTPase Der [Vibrio cholerae HE-25]
gi|408054532|gb|EKG89502.1| GTPase Der [Vibrio cholerae HE-16]
gi|408626937|gb|EKK99766.1| ribosome-associated GTPase EngA [Vibrio cholerae CP1035(8)]
Length = 494
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 290/445 (65%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR+ +P +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
+ I++ + S +F++LG+ + I+A +G G+ ++ L P+ + + ++
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176
Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
TN E IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F SGRS+++ VNKWD + + ++ +K + ++L F+ FA +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN++ + + YKRYL
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYL 441
>gi|153216257|ref|ZP_01950357.1| GTP-binding protein [Vibrio cholerae 1587]
gi|124114402|gb|EAY33222.1| GTP-binding protein [Vibrio cholerae 1587]
Length = 494
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 290/445 (65%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR+ +P +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
+ I++ + S +F++LG+ + I+A +G G+ ++ L P+ + + ++
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176
Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
TN E IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TNEEDPEEEPLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F SGRS+++ VNKWD + + ++ +K + ++L F+ FA +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN++ + + YKRYL
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYL 441
>gi|153800614|ref|ZP_01955200.1| GTP-binding protein [Vibrio cholerae MZO-3]
gi|153824529|ref|ZP_01977196.1| GTP-binding protein [Vibrio cholerae MZO-2]
gi|229513098|ref|ZP_04402564.1| GTP-binding protein EngA [Vibrio cholerae TMA 21]
gi|229523415|ref|ZP_04412822.1| GTP-binding protein EngA [Vibrio cholerae TM 11079-80]
gi|229525408|ref|ZP_04414813.1| GTP-binding protein EngA [Vibrio cholerae bv. albensis VL426]
gi|229530107|ref|ZP_04419497.1| GTP-binding protein EngA [Vibrio cholerae 12129(1)]
gi|254225026|ref|ZP_04918640.1| GTP-binding protein [Vibrio cholerae V51]
gi|384423994|ref|YP_005633352.1| GTP-binding protein EngA [Vibrio cholerae LMA3984-4]
gi|417820186|ref|ZP_12466800.1| GTPase Der [Vibrio cholerae HE39]
gi|417823876|ref|ZP_12470467.1| GTPase Der [Vibrio cholerae HE48]
gi|419829375|ref|ZP_14352861.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-1A2]
gi|419832345|ref|ZP_14355807.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-61A2]
gi|419835675|ref|ZP_14359119.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-46B1]
gi|421342416|ref|ZP_15792822.1| GTPase Der [Vibrio cholerae HC-43B1]
gi|421353561|ref|ZP_15803893.1| GTPase Der [Vibrio cholerae HE-45]
gi|422916546|ref|ZP_16950882.1| GTPase Der [Vibrio cholerae HC-02A1]
gi|423734038|ref|ZP_17707252.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-41B1]
gi|423818064|ref|ZP_17715485.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55C2]
gi|423850023|ref|ZP_17719274.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59A1]
gi|423879146|ref|ZP_17722879.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-60A1]
gi|423950229|ref|ZP_17733669.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-40]
gi|423977925|ref|ZP_17737217.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-46]
gi|423996968|ref|ZP_17740229.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-02C1]
gi|424008322|ref|ZP_17751271.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-44C1]
gi|424015672|ref|ZP_17755517.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55B2]
gi|424018611|ref|ZP_17758409.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59B1]
gi|424624152|ref|ZP_18062627.1| GTPase Der [Vibrio cholerae HC-50A1]
gi|424628648|ref|ZP_18066951.1| GTPase Der [Vibrio cholerae HC-51A1]
gi|424632682|ref|ZP_18070796.1| GTPase Der [Vibrio cholerae HC-52A1]
gi|424635771|ref|ZP_18073790.1| GTPase Der [Vibrio cholerae HC-55A1]
gi|424639686|ref|ZP_18077580.1| GTPase Der [Vibrio cholerae HC-56A1]
gi|424647748|ref|ZP_18085422.1| GTPase Der [Vibrio cholerae HC-57A1]
gi|429884988|ref|ZP_19366593.1| GTP-binding protein EngA [Vibrio cholerae PS15]
gi|443526534|ref|ZP_21092613.1| GTPase Der [Vibrio cholerae HC-78A1]
gi|124123903|gb|EAY42646.1| GTP-binding protein [Vibrio cholerae MZO-3]
gi|125622413|gb|EAZ50733.1| GTP-binding protein [Vibrio cholerae V51]
gi|149741747|gb|EDM55776.1| GTP-binding protein [Vibrio cholerae MZO-2]
gi|229333881|gb|EEN99367.1| GTP-binding protein EngA [Vibrio cholerae 12129(1)]
gi|229338989|gb|EEO04006.1| GTP-binding protein EngA [Vibrio cholerae bv. albensis VL426]
gi|229339778|gb|EEO04793.1| GTP-binding protein EngA [Vibrio cholerae TM 11079-80]
gi|229349991|gb|EEO14945.1| GTP-binding protein EngA [Vibrio cholerae TMA 21]
gi|327483547|gb|AEA77954.1| GTP-binding protein EngA [Vibrio cholerae LMA3984-4]
gi|340037817|gb|EGQ98791.1| GTPase Der [Vibrio cholerae HE39]
gi|340047561|gb|EGR08484.1| GTPase Der [Vibrio cholerae HE48]
gi|341640023|gb|EGS64626.1| GTPase Der [Vibrio cholerae HC-02A1]
gi|395945167|gb|EJH55837.1| GTPase Der [Vibrio cholerae HC-43B1]
gi|395952686|gb|EJH63299.1| GTPase Der [Vibrio cholerae HE-45]
gi|408015213|gb|EKG52807.1| GTPase Der [Vibrio cholerae HC-50A1]
gi|408020594|gb|EKG57890.1| GTPase Der [Vibrio cholerae HC-52A1]
gi|408026442|gb|EKG63449.1| GTPase Der [Vibrio cholerae HC-56A1]
gi|408026856|gb|EKG63850.1| GTPase Der [Vibrio cholerae HC-55A1]
gi|408036329|gb|EKG72767.1| GTPase Der [Vibrio cholerae HC-57A1]
gi|408058514|gb|EKG93310.1| GTPase Der [Vibrio cholerae HC-51A1]
gi|408620960|gb|EKK93963.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-1A2]
gi|408631484|gb|EKL04024.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-41B1]
gi|408636377|gb|EKL08525.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55C2]
gi|408643366|gb|EKL15091.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-60A1]
gi|408644490|gb|EKL16174.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59A1]
gi|408650989|gb|EKL22245.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-61A2]
gi|408661092|gb|EKL32085.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-40]
gi|408665937|gb|EKL36743.1| ribosome-associated GTPase EngA [Vibrio cholerae HE-46]
gi|408854021|gb|EKL93791.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-02C1]
gi|408858429|gb|EKL98103.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-46B1]
gi|408861708|gb|EKM01281.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-55B2]
gi|408865762|gb|EKM05154.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-44C1]
gi|408869617|gb|EKM08911.1| ribosome-associated GTPase EngA [Vibrio cholerae HC-59B1]
gi|429228320|gb|EKY34248.1| GTP-binding protein EngA [Vibrio cholerae PS15]
gi|443455097|gb|ELT18885.1| GTPase Der [Vibrio cholerae HC-78A1]
Length = 494
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 290/445 (65%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR+ +P +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
+ I++ + S +F++LG+ + I+A +G G+ ++ L P+ + + ++
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176
Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
TN E IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F SGRS+++ VNKWD + + ++ +K + ++L F+ FA +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN++ + + YKRYL
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYL 441
>gi|218889917|ref|YP_002438781.1| GTP-binding protein EngA [Pseudomonas aeruginosa LESB58]
gi|226741143|sp|B7UWJ2.1|DER_PSEA8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218770140|emb|CAW25902.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa LESB58]
Length = 493
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/435 (45%), Positives = 282/435 (64%), Gaps = 17/435 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QAI E+D ++F+VD R G+ D++I LRK + L+ NK
Sbjct: 61 SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKRNKRSFLIANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
+ I+ ++ +F LG+G+ I+A +G GI + L+ L I E ++
Sbjct: 120 VDTIDPDLARAEFSPLGLGDALPIAAAHGRGINHMLQEALGIFPKDNVEEEGEGEPASEE 179
Query: 168 FFKKKEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+ +E T I + IK+AI+G+PNVGKSTL+N +LGE RVI YD GTTRDSI
Sbjct: 180 VAEGEEPTRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
FE N +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ + D+N
Sbjct: 240 FERNEEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLN 299
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ +
Sbjct: 300 LLGFVLETGRALVIALNKWDGMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
+S+ + S++ TSR+T L A++ H P R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQESFRSAVTRWPTSRLTSILEDAVQVHQPPMVNGRRIKLRYAHLGGANPPLIVIHG 419
Query: 405 NRLKYIGNDYKRYLE 419
N++ + Y RYLE
Sbjct: 420 NQVDAVPKAYTRYLE 434
>gi|336124873|ref|YP_004566921.1| GTP-binding protein [Vibrio anguillarum 775]
gi|335342596|gb|AEH33879.1| GTP-binding protein [Vibrio anguillarum 775]
Length = 510
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/443 (43%), Positives = 290/443 (65%), Gaps = 26/443 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 16 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHDFIVIDTGGI 75
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D++I LRK + +LV+NK
Sbjct: 76 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTAADEVIAQHLRKIEKRAILVVNK 134
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLE---NILTIELPYKKFFKKKEFTN 176
+ I++ + S +F++LG+ + I+A +G G+ ++ N L E+ + + ++ T+
Sbjct: 135 VDGIDADAASAEFWQLGVDQMYQIAAAHGRGVGILIDRALNPLAEEMLEQAEGEIEDLTD 194
Query: 177 IHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
E IK+AI+G+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 195 FEDAEEEKLDYTEEEAEAEYKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG 254
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI + ++Y+LIDTAG+RRR + E +EKFSV+KTLK++ +ANVV+L++DA+
Sbjct: 255 TTRDSIYIPMMRDEREYVLIDTAGVRRRTRINETVEKFSVVKTLKAVEDANVVLLVIDAR 314
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+NIS QD+++ F +GRS+++ VNKWD + ++ ++ +K + ++L F+ FA +FISA
Sbjct: 315 ENISDQDLSLLGFALNAGRSIVLAVNKWDGLDNDVKERVKKELDRRLGFVDFARIHFISA 374
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + ES+ Y S+ + TS +TR L A +H P + R KL+YAH GG
Sbjct: 375 LHGTGVGHLFESVQEAYKSATTRVGTSVLTRILKMATDDHQPPMVRSRRVKLKYAHAGGY 434
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPIIV+HGN + + + YKRYL
Sbjct: 435 NPPIIVVHGNLVNELPDSYKRYL 457
>gi|110834717|ref|YP_693576.1| GTP-binding protein [Alcanivorax borkumensis SK2]
gi|123149362|sp|Q0VNE4.1|DER_ALCBS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|110647828|emb|CAL17304.1| GTP-binding protein, putative [Alcanivorax borkumensis SK2]
Length = 471
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/421 (43%), Positives = 281/421 (66%), Gaps = 3/421 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+G +G + ++DTGG
Sbjct: 3 MKPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGDGQLGGYLYTVVDTGGI 62
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E GI MT Q+ QA+ E+D+++F+VDGR GL D+ I + LRK +P L++NK
Sbjct: 63 G-ENDDGIDVPMTSQSLQAVGEADVVLFMVDGRAGLTAADEQIASELRKLPKPTYLIVNK 121
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ +++ ++ +F+ LG+ I+A +G G+ + +E+IL + + + T+
Sbjct: 122 TDGVDADSAMSEFFALGLTEVLPIAAAHGRGVTSMIEHILEGFTDLELLPEGEHRTSKKP 181
Query: 180 IE-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
E I+VA++G+PNVGKSTLIN +LGE RV+ +D GTTRDSI+ FE + Y LIDTA
Sbjct: 182 GEDSIRVAVLGRPNVGKSTLINRMLGEERVVVFDHAGTTRDSIEVPFERMGRAYTLIDTA 241
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K FE++EKFSVIK L+++ A VV++++DA++ I+ QD+++ + +SGR+L++
Sbjct: 242 GVRRRGKVFEMVEKFSVIKALQAMEAAQVVVVVIDAREGITDQDLHLLGYALDSGRALMI 301
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + + ++ ++ N+ ++L F + FISA+ + + +DS+ I
Sbjct: 302 AVNKWDGLEADHKERVRVNLGRRLEFAPWVKIKFISALHGTGVGDLWGMVEQAWDSAFIK 361
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T+ +TR + HPP R R KLRYAH GG NPP +V+HGNR + + YK++L
Sbjct: 362 IGTNELTRMMEEITNGHPPPRNGRFRAKLRYAHLGGNNPPTLVLHGNRTEALPTSYKKFL 421
Query: 419 E 419
E
Sbjct: 422 E 422
>gi|297581162|ref|ZP_06943086.1| GTP-binding protein [Vibrio cholerae RC385]
gi|297534478|gb|EFH73315.1| GTP-binding protein [Vibrio cholerae RC385]
Length = 494
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 290/445 (65%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR+ +P +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
+ I++ + S +F++LG+ + I+A +G G+ ++ L P+ + + ++
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176
Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
TN E IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TNEEDPEEEQLEYSEEEAEVEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F SGRS+++ VNKWD + + ++ +K + ++L F+ FA +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN++ + + YKRYL
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYL 441
>gi|393764193|ref|ZP_10352805.1| GTP-binding protein Der [Alishewanella agri BL06]
gi|392604823|gb|EIW87722.1| GTP-binding protein Der [Alishewanella agri BL06]
Length = 498
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 286/443 (64%), Gaps = 26/443 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGR NVGKSTLFNRLT SRDALVA++PGLTRDR YG FI++DTGG
Sbjct: 1 MLPVVALVGRANVGKSTLFNRLTRSRDALVADFPGLTRDRKYGTVKFEGMEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ +AI E+D+++F+VD R G D I +RK +P+ LV NK
Sbjct: 61 DGN-EQGIEVEMAEQSLKAIAEADVVLFMVDARAGATVGDTAIAAHIRKVEKPVFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNF----------------LENILTIEL 163
++ +++ ++ DFY LG+G + I+A +G G+ + ++ +
Sbjct: 120 TDGLDADTAVADFYSLGLGEVYPIAAAHGRGVTSLLQLALLPFLQQQLPSAVDGEAQEDA 179
Query: 164 PYKKFFKKKEFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
+ + KE T + E+IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 EFAESADFKEMTEEEAEAEAARLRSEHIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 239
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI + N + Y LIDTAG+RRR K +++EKFSV+KTL++I +ANVV+L+LDA+
Sbjct: 240 TTRDSIYIPMQRNGRDYTLIDTAGVRRRGKIDDMVEKFSVVKTLQAIEDANVVVLVLDAR 299
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
Q IS QD++I F+ +GRSL++ VNKWD + N + IK + ++L F+ FA +FISA
Sbjct: 300 QGISDQDLSILGFVLNAGRSLVLAVNKWDGLNDNVKDEIKRELDRRLGFIDFARLHFISA 359
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ +DS+ +STS +TR + A ++H P R KL+YAH GG
Sbjct: 360 LHGSGVGNLFESVEEAFDSATKRVSTSLLTRIMKMAQEDHQPPMVAGRRVKLKYAHAGGY 419
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 420 NPPIVVIHGNQVKDLPDSYKRYL 442
>gi|91792618|ref|YP_562269.1| GTP-binding protein EngA [Shewanella denitrificans OS217]
gi|122968866|sp|Q12PT0.1|DER_SHEDO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|91714620|gb|ABE54546.1| Small GTP-binding protein domain [Shewanella denitrificans OS217]
Length = 491
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/439 (44%), Positives = 279/439 (63%), Gaps = 25/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DGS-EEGIETKMAEQSLAAIEEADVVLFLTDARAGLTSADLAIAQHLRSRDKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ I++ S+ +F+ LG+G + ++A G G+ N +E L PY + + +
Sbjct: 120 VDGIDADSVCGEFWALGLGEVYQMAAAQGRGVTNMIEYALA---PYAEAMGLNRDDDEQA 176
Query: 180 IEY--------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
IE IK+AI+GKPNVGKSTLIN +LGE RV+ YD PGTTRD
Sbjct: 177 IEEEREYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLINRILGEERVVVYDAPGTTRD 236
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI E ++Y+LIDTAG+RRR+K EVIEKFSVIKTLK++ +ANVV+L++DA++ I+
Sbjct: 237 SIYIPMEREGREYVLIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLVVDAREGIA 296
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA+
Sbjct: 297 EQDLGLLGFTLNAGRALVIAVNKWDGIDQTVKDRVKSELDRRLGFIDFAKIHFISALHGT 356
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI
Sbjct: 357 GVGHLYESIEEAYDSATRRVSTSMLTRVMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPI 416
Query: 400 IVIHGNRLKYIGNDYKRYL 418
IV+HGN++ + + YKRY+
Sbjct: 417 IVVHGNQVSKLPDSYKRYM 435
>gi|260771392|ref|ZP_05880317.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972]
gi|375131798|ref|YP_004993898.1| GTP-binding protein [Vibrio furnissii NCTC 11218]
gi|260613518|gb|EEX38712.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972]
gi|315180972|gb|ADT87886.1| GTP-binding protein [Vibrio furnissii NCTC 11218]
Length = 495
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/446 (43%), Positives = 289/446 (64%), Gaps = 32/446 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M Q+ AI E+D+++F+VDGR GL D+ I N LR+ + +LV+NK
Sbjct: 61 DGS-EEGVETKMAAQSLAAIDEADVVLFMVDGRAGLTVADEAIANHLRRVEKNAILVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE------ 173
+ I++ + S +F++LG+ I+A +G G+ ++ L P + +++E
Sbjct: 120 VDGIDAETASAEFWQLGVDQMFQIAAAHGRGVGALIDRALN---PLAEQMQQEEAALEDL 176
Query: 174 --FTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVITYD 212
F + E IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TGFVDAEQEEKLDYTEEEAEEAYKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYD 236
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI + + ++Y+LIDTAG+RRR + E +EKFSV+KTLK+I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMQRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLKAIEDANVVLLVV 296
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++NIS QD+++ F +GRS+++ VNKWD + + ++ +K + ++L F+ FA +F
Sbjct: 297 DARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDTDVKERVKKELDRRLGFVDFARIHF 356
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + ES+ Y S+ + TS +TR + A ++H P + R KL+YAH
Sbjct: 357 ISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATEDHQPPLVRGRRVKLKYAHA 416
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPIIVIHGN++ + + YKRYL
Sbjct: 417 GGYNPPIIVIHGNQVNELPDSYKRYL 442
>gi|262402852|ref|ZP_06079413.1| GTP-binding protein EngA [Vibrio sp. RC586]
gi|262351634|gb|EEZ00767.1| GTP-binding protein EngA [Vibrio sp. RC586]
Length = 494
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/445 (43%), Positives = 290/445 (65%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI++DTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR+ +P +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
+ I++ + S +F++LG+ + I+A +G G+ ++ L P+ + + ++
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176
Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
TN E IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F SGRS+++ VNKWD + + ++ +K + ++L F+ FA +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSIDVKEHVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN++ + + YKRYL
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYL 441
>gi|254428914|ref|ZP_05042621.1| GTPase, putative [Alcanivorax sp. DG881]
gi|196195083|gb|EDX90042.1| GTPase, putative [Alcanivorax sp. DG881]
Length = 469
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/421 (43%), Positives = 281/421 (66%), Gaps = 3/421 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+G +G + ++DTGG
Sbjct: 1 MKPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGDGQLGGYLYTVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E GI MT Q+ QA+ E+D+++F+VDGR GL D+ I + LRK +P L++NK
Sbjct: 61 G-ENDDGIDVPMTSQSLQAVGEADVVLFMVDGRAGLTAADEQIASELRKLPKPTYLIVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ +++ ++ +F+ LG+ I+A +G G+ + +E+IL + + + T+
Sbjct: 120 TDGVDADSAMSEFFALGLTEVLPIAAAHGRGVTSMIEHILEGFTDLELLPEGEHRTSKKP 179
Query: 180 IE-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
E I+VA++G+PNVGKSTLIN +LGE RV+ +D GTTRDSI+ FE + Y LIDTA
Sbjct: 180 GEDSIRVAVLGRPNVGKSTLINRMLGEERVVVFDHAGTTRDSIEVPFERMGRAYTLIDTA 239
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K FE++EKFSVIK L+++ A VV++++DA++ I+ QD+++ + +SGR+L++
Sbjct: 240 GVRRRGKVFEMVEKFSVIKALQAMEAAQVVVVVIDAREGITDQDLHLLGYALDSGRALMI 299
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + + ++ ++ N+ ++L F + FISA+ + + +DS+ I
Sbjct: 300 AVNKWDGLEADHKERVRVNLGRRLEFAPWVKIKFISALHGTGVGDLWGMVEQAWDSAFIK 359
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T+ +TR + HPP R R KLRYAH GG NPP +V+HGNR + + YK++L
Sbjct: 360 IGTNELTRMMEEITNGHPPPRNGRFRAKLRYAHLGGNNPPTLVLHGNRTEALPASYKKFL 419
Query: 419 E 419
E
Sbjct: 420 E 420
>gi|258619961|ref|ZP_05715001.1| GTP-binding protein [Vibrio mimicus VM573]
gi|258627193|ref|ZP_05721981.1| GTP-binding protein [Vibrio mimicus VM603]
gi|262165075|ref|ZP_06032812.1| GTP-binding protein EngA [Vibrio mimicus VM223]
gi|262172166|ref|ZP_06039844.1| GTP-binding protein EngA [Vibrio mimicus MB-451]
gi|424808309|ref|ZP_18233711.1| GTP-binding protein [Vibrio mimicus SX-4]
gi|449146967|ref|ZP_21777718.1| GTP-binding protein EngA [Vibrio mimicus CAIM 602]
gi|258580495|gb|EEW05456.1| GTP-binding protein [Vibrio mimicus VM603]
gi|258587694|gb|EEW12403.1| GTP-binding protein [Vibrio mimicus VM573]
gi|261893242|gb|EEY39228.1| GTP-binding protein EngA [Vibrio mimicus MB-451]
gi|262024791|gb|EEY43459.1| GTP-binding protein EngA [Vibrio mimicus VM223]
gi|342324846|gb|EGU20627.1| GTP-binding protein [Vibrio mimicus SX-4]
gi|449077461|gb|EMB48444.1| GTP-binding protein EngA [Vibrio mimicus CAIM 602]
Length = 494
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 290/445 (65%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR+ +P +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
+ I++ + S +F++LG+ + I+A +G G+ ++ L P+ + + ++
Sbjct: 120 VDGIDADAASAEFWQLGMEQMYQIAAAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176
Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
TN E IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TNEEDPEEEKLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F SGRS+++ VNKWD + + ++ +K + ++L F+ FA +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLNTDVKEHVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN++ + + YKRYL
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYL 441
>gi|338997175|ref|ZP_08635877.1| GTP-binding protein EngA [Halomonas sp. TD01]
gi|338765940|gb|EGP20870.1| GTP-binding protein EngA [Halomonas sp. TD01]
Length = 467
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/419 (44%), Positives = 276/419 (65%), Gaps = 7/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G K++ +IDTGG
Sbjct: 1 MTPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGGKAYTVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+DI++F+VD R GL D+ I N LR + + LV+NK
Sbjct: 61 SGD-EEGIDAAMAEQSLAAIDEADIVLFLVDARAGLNVADEAIANHLRVNQKKTWLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + S DF+ LG+G+P I+A +G + ++ +L P+ + +
Sbjct: 120 TDGLEEHSAMADFWTLGLGDPWPIAAAHGRNVSLLIDTVLE---PFPE--RDPSIPGDTG 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++ ++G+PNVGKSTL+N LLGE RV+ +D GTTRD+I+ FE K Y+LIDTAG
Sbjct: 175 TKGIRIGVIGRPNVGKSTLVNRLLGEERVVVFDEAGTTRDAIEIPFERRGKPYVLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR E+ EKFS+IKTL +I E +V +++LDA+ + QD+++ +++ SGR+L++
Sbjct: 235 IRRRKNVSEIAEKFSIIKTLDAIKECHVAVMVLDARSGLVEQDLHLLDYVLTSGRALVLA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + + ++ ++ IK++L F +A +FISA+ + SI +D++ H
Sbjct: 295 INKWDGLESDAKEKMRAEIKRRLGFAEYAEMHFISALHGTAVGDLYPSIERAFDAANAHW 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+R+T L A+ HPP R KLR AHQGG NPPIIV+HGN+ + + Y+RYL
Sbjct: 355 STNRLTTLLQDAVSQHPPPMVNGRRIKLRMAHQGGSNPPIIVVHGNQTESLPEAYRRYL 413
>gi|406941778|gb|EKD74178.1| GTP-binding protein engA [uncultured bacterium]
Length = 461
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/419 (46%), Positives = 284/419 (67%), Gaps = 10/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGRPNVGKSTLFN LT R ALV+ PG+TRDR YGE I + FIIIDTGG
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNCLTRRRAALVSPMPGMTRDRQYGEADIADRRFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E K + M +Q++QAI+E+D IIF+VDGR L D+ I LR + I LV+NK
Sbjct: 61 SHE-KNNLDRLMAEQSEQAILEADKIIFLVDGRTELTAADRSIVKKLRALNKNIFLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E ++S++++ DF++LG+G P+ ISA +G GI+ ++ +L P ++ +KE +
Sbjct: 120 TEGLDSNVAIADFFQLGLGTPYPISAAHGKGIEELVQTLL----PIQEIGNEKE----PN 171
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AI+G+PNVGKSTLIN +LGE+RVI +D PGTTRDSI NK+Y LIDTAG
Sbjct: 172 ATGIKLAIIGRPNVGKSTLINRMLGEDRVIVFDEPGTTRDSIFIPLTRFNKEYTLIDTAG 231
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE EKFSV+KTL++I +VVI ++DA++ ++ QD+ + FI ESGR+L++
Sbjct: 232 VRQRGKIFETTEKFSVVKTLQAIETTHVVIFVIDAREGVTEQDLRLLGFILESGRALVIA 291
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++ + I ++L+F+ F +FISA+ + + + +S++ Y S+ L
Sbjct: 292 INKWDGMTLEEKDKTRATIDRRLHFVPFVRIHFISALHGSGVGNLFDSVDEAYVSANKKL 351
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST ++T+ L A+ H P + R KLRYAH GG NPP+I+IHGN++K + Y+RYL
Sbjct: 352 STPKLTQILEEAVTQHAPPLVQGRRIKLRYAHSGGNNPPLIIIHGNQVKALPEAYRRYL 410
>gi|270156684|ref|ZP_06185341.1| putative GTP-binding protein EngA [Legionella longbeachae D-4968]
gi|289164869|ref|YP_003455007.1| GTPase involved in ribosome synthesis and maintenance [Legionella
longbeachae NSW150]
gi|269988709|gb|EEZ94963.1| putative GTP-binding protein EngA [Legionella longbeachae D-4968]
gi|288858042|emb|CBJ11902.1| GTPase involved in ribosome synthesis and maintenance [Legionella
longbeachae NSW150]
Length = 466
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 287/420 (68%), Gaps = 12/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN+LT ++DALVA+YPGLTRDR YG+ K +I++DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNKLTKTQDALVADYPGLTRDRQYGQAQHDDKHYIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + M+KQ++ A+ E+DI++F+VDGR GL D+ I LRK + + LV+NK
Sbjct: 61 GID-DIAVDSLMSKQSEIALHEADIVLFLVDGRDGLTGIDEKIATNLRKLNKKVHLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E ++ I+ DF LGI + H IS+ +G GI+ L++IL+ +P + +
Sbjct: 120 TEGLDDDIACADFQSLGITSIHSISSSHGTGIRTLLDDILSPFVP--------QCEKVEE 171
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK+A G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI F +N++Y+LIDTAG
Sbjct: 172 MHAIKIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSIAIPFARDNQQYVLIDTAG 231
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+++ E IEKFSVIKTLK+I E+NV + LLDA + I+ QD+N+ FI ESG++L++
Sbjct: 232 VRRKSRIDEKIEKFSVIKTLKAIEESNVCLQLLDANEGITDQDMNLLGFIIESGKALVIA 291
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + ++ IK+ + ++L+F +FA FISA+ + + + + IN Y S+I
Sbjct: 292 VNKWDGLDEEHKEKIKSELSRRLHFANFAKIRFISALHGSGVGNLFKDINEAYTSAIQSF 351
Query: 360 STSRITRALIS-AIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST ++TR L + K+ PPC R KLRYAH GG NPP+IVIHGN+L + + YKRYL
Sbjct: 352 STPKLTRLLQDLSTKHTPPCVNGR-RIKLRYAHLGGHNPPVIVIHGNQLADLPDSYKRYL 410
>gi|242240151|ref|YP_002988332.1| GTP-binding protein EngA [Dickeya dadantii Ech703]
gi|242132208|gb|ACS86510.1| small GTP-binding protein [Dickeya dadantii Ech703]
Length = 494
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/446 (44%), Positives = 287/446 (64%), Gaps = 32/446 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + FIIIDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ QAI E+DI++F+VD R GL+ D I LR + LV NK
Sbjct: 61 DGS-EDGVETRMAEQSLQAIEEADIVLFLVDARDGLMPADHAIAQHLRTREKATFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
+ I+ + DFY LG G+ + I+A +G G+ + LE+ L LP+
Sbjct: 120 VDGIDIDTGIADFYSLGFGDVYPIAASHGRGVTSLLESAL---LPFVDAGEPERELTEEE 176
Query: 166 --KKFFKKK-----------EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
++ ++ + + + + IK+AIVG+PNVGKSTL N +LGE+RV+ YD
Sbjct: 177 ENAAYWAEQLGEEEGESEEEDAFPVPADQPIKLAIVGRPNVGKSTLTNRILGEDRVVVYD 236
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI E + ++YILIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMERDEREYILIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVI 296
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +F
Sbjct: 297 DAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEIKEQVKETLDLRLGFIDFARIHF 356
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + + + ES++ Y+ S + T+ +TR + A+ +H P + R KL+YAH
Sbjct: 357 ISALHGSGVGNLFESVDEAYECSTRRVGTAMLTRIMQMAVDDHQPPLVRGRRVKLKYAHA 416
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++K + + YKRYL
Sbjct: 417 GGYNPPIVVIHGNQVKDLPDSYKRYL 442
>gi|406941776|gb|EKD74177.1| hypothetical protein ACD_45C00050G0004 [uncultured bacterium]
Length = 461
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/419 (46%), Positives = 282/419 (67%), Gaps = 11/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGRPNVGKSTLFN LT SR ALV+++PG+TRDR YGE I + FI+IDTGG
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNCLTQSRAALVSHFPGMTRDRQYGEATIANRRFIVIDTGGM 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E K + M +Q++QAI+E+D +I +VD R GL D+ I LR + I LV+NK
Sbjct: 61 TDE-KNDLDLLMAQQSQQAILEADQVILLVDARTGLTPADQFIVEKLRPLNKNIFLVVNK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E ++ SI+ DF++LG+G P+ ISA + I +++IL IE P K E ++I
Sbjct: 120 TEGLDFSIATADFFQLGLGTPYAISAAHSGRITELIQSILPIEEP------KPEESDIAG 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I K+A+VG+PNVGKSTLIN +LGE RV+ +D PGTTRDSI F+ +K YILIDTAG
Sbjct: 174 I---KLAVVGRPNVGKSTLINRMLGEERVLVFDQPGTTRDSIFIPFKRFSKDYILIDTAG 230
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K FE EKFSV+KTL++I +VV+ ++DA + ++ QD+ + FI +SG++L++
Sbjct: 231 VRQRGKIFETTEKFSVVKTLQAIETTHVVLFVMDAHEGVTEQDLRLLGFILDSGKALVIA 290
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++ + + ++LNF+ F +FISA+ + + + +S++ Y S+ L
Sbjct: 291 MNKWDGMAVEEKDKARATLDRRLNFIPFVRIHFISALHGSGVGNLFDSVDEAYLSANKKL 350
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST ++T+ L AI H P + R KLRYAH GG NPP IVIHGN++ + + Y+RYL
Sbjct: 351 STPKLTKILQEAIVQHSPPLVQGRRIKLRYAHPGGSNPPCIVIHGNQVSALPDAYRRYL 409
>gi|429212024|ref|ZP_19203189.1| GTP-binding protein EngA [Pseudomonas sp. M1]
gi|428156506|gb|EKX03054.1| GTP-binding protein EngA [Pseudomonas sp. M1]
Length = 495
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/437 (44%), Positives = 279/437 (63%), Gaps = 19/437 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+VA Y GLTRDR YGE K FI+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKTRDAIVAEYAGLTRDRQYGEAKWQGKKFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QAI E+D ++F+VD R GL D++I LRK + LV NK
Sbjct: 61 TGD-EEGIDAKMAEQSMQAIEEADAVLFMVDARAGLTAADEMIAEHLRKRNKRSYLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELP--- 164
+ ++ I+ +F LG+G+ I+A +G GI + L+ L +LP
Sbjct: 120 IDTVDPDIARAEFSPLGLGDALTIAAAHGRGITHMLQTALGEMFQPEPEAPEDNDLPDEL 179
Query: 165 --YKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIK 222
+ + K + IK+AI+G+PNVGKSTL+N +LGE RVI YD GTTRDSI
Sbjct: 180 EEVAEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIY 239
Query: 223 SLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQD 282
FE N +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ + D
Sbjct: 240 IPFERNEEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHD 299
Query: 283 INIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNIN 342
+N+ F+ E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ +
Sbjct: 300 LNLLGFVLETGRALVIALNKWDGMESGERDYVKTELERRLLFVDFADIHFISALHGTGVG 359
Query: 343 SFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVI 402
+S+ + S++ TS++T+ L A++ H P R KLRYAH GG NPP+IV+
Sbjct: 360 HLYKSVQESFRSAVTRWPTSKLTQILEDAVQTHQPPMVNGRRIKLRYAHLGGANPPLIVV 419
Query: 403 HGNRLKYIGNDYKRYLE 419
HGN+ + + Y RYLE
Sbjct: 420 HGNQTEAVPKAYTRYLE 436
>gi|86145598|ref|ZP_01063928.1| GTP-binding protein EngA [Vibrio sp. MED222]
gi|85836569|gb|EAQ54695.1| GTP-binding protein EngA [Vibrio sp. MED222]
Length = 493
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 288/445 (64%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D I LR+ +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
+ I+ + S DF++LG+ + + I+A +G G+ ++ L P+ + K +
Sbjct: 120 VDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN---PFAEALKAENGEVSDL 176
Query: 173 -----------EFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
+FT + + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TEFEDEEEEQVDFTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR E +EKFSV+KTLK+I +ANVV+LL+D
Sbjct: 237 PGTTRDSIYIPMQRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAIEDANVVLLLID 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F +GRS+++ VNKWD + ++ + +K + ++L F+ FA +FI
Sbjct: 297 ARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN+++ + + YKR+L
Sbjct: 417 GYNPPIIVIHGNQVRNLPDSYKRFL 441
>gi|441504678|ref|ZP_20986671.1| GTP-binding protein EngA [Photobacterium sp. AK15]
gi|441427777|gb|ELR65246.1| GTP-binding protein EngA [Photobacterium sp. AK15]
Length = 500
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/448 (43%), Positives = 283/448 (63%), Gaps = 34/448 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ + + FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGKAELEEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR +P LV+NK
Sbjct: 61 DG-TEDGVETKMAEQSLAAIEEADVVLFLVDGRAGLTAADQAIAKHLRSRNKPTFLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
+ I++ S DF++LG+ + I+A G+ +E L P+ + K++
Sbjct: 120 IDGIDADSACADFWQLGVDAMYQIAAAQNRGVTALMERALA---PFAEELKEQAGDEDEV 176
Query: 173 ---EFTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVIT 210
+ ++ IE IK+AI+G+PNVGKSTL N +LGE RV+
Sbjct: 177 SIEDLNSVEDIENANLSEADAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVV 236
Query: 211 YDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVIL 270
YD PGTTRDSI E ++Y+LIDTAGIRRR E +EKFSV++TLK+I +ANVV+L
Sbjct: 237 YDMPGTTRDSIYIPMEREGQEYVLIDTAGIRRRKNMHEAVEKFSVVQTLKAIEDANVVLL 296
Query: 271 LLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMF 330
++DA++NIS QD+++ + +GRSL++ VNKWD + + ++ +K+ + ++L F+ FA
Sbjct: 297 VIDARENISDQDLSLLGYALNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARI 356
Query: 331 NFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYA 390
+FISA+ + ES+ Y S+ +STS +TR + A +H P + R KL+YA
Sbjct: 357 HFISALHGTGVGHLYESVQEAYQSATKRISTSMLTRIMQMAQDDHQPPMIRGRRVKLKYA 416
Query: 391 HQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
H GG NPPIIVIHGN + + YKRYL
Sbjct: 417 HAGGYNPPIIVIHGNLVNELPGSYKRYL 444
>gi|397170943|ref|ZP_10494353.1| GTP-binding protein Der [Alishewanella aestuarii B11]
gi|396087417|gb|EJI85017.1| GTP-binding protein Der [Alishewanella aestuarii B11]
Length = 498
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 286/443 (64%), Gaps = 26/443 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGR NVGKSTLFNRLT +RDALVA++PGLTRDR YG FI++DTGG
Sbjct: 1 MLPVVALVGRANVGKSTLFNRLTRTRDALVADFPGLTRDRKYGSVKFEGMEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ +AI E+D+++F+VD R G D I +RK +P+ LV NK
Sbjct: 61 DGN-EQGIEVEMAEQSLKAIAEADVVLFMVDARAGATVGDTAIAAHIRKVEKPVFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNF----------------LENILTIEL 163
++ +++ ++ DFY LG+G + I+A +G G+ + E +
Sbjct: 120 TDGLDADTAVADFYSLGLGEVYPIAAAHGRGVTSLLQLALLPFLQQQLPAAAEGEAQDDA 179
Query: 164 PYKKFFKKKEFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
+ + KE T + E+IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 EFTESADFKEMTEEEAEAEAARLRSEHIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 239
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI + N++ Y LIDTAG+RRR K +++EKFSV+KTL++I +ANVV+L+LDA+
Sbjct: 240 TTRDSIYIPMQRNDRNYTLIDTAGVRRRGKIDDMVEKFSVVKTLQAIEDANVVVLVLDAR 299
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
Q IS QD++I F+ +GRSL++ VNKWD + + + IK + ++L F+ FA +FISA
Sbjct: 300 QGISDQDLSILGFVLNAGRSLVLAVNKWDGLNDSVKDEIKRELDRRLGFIDFARLHFISA 359
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ +DS+ +STS +TR + A ++H P R KL+YAH GG
Sbjct: 360 LHGSGVGNLFESVEEAFDSATKRVSTSLLTRIMKMAQEDHQPPMVAGRRVKLKYAHAGGY 419
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPIIVIHGN++K + + YKRYL
Sbjct: 420 NPPIIVIHGNQVKDLPDSYKRYL 442
>gi|352106574|ref|ZP_08961517.1| GTP-binding protein EngA [Halomonas sp. HAL1]
gi|350597617|gb|EHA13745.1| GTP-binding protein EngA [Halomonas sp. HAL1]
Length = 467
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 278/419 (66%), Gaps = 7/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G K + +IDTGG
Sbjct: 1 MTPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGDKVYTVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+DI++F+VD R GL+ D+ I N LR + + LV+NK
Sbjct: 61 SGD-EEGIDAAMAEQSLAAIDEADIVLFMVDARAGLIAADQAIANHLRVNQKKTWLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + ++ DF+ LG+G+P I+A +G + ++ +L P+ + +
Sbjct: 120 TDGLEEHSAMGDFWSLGLGDPWPIAAAHGRNVSTLMDVVLE---PFPE--RDASIPADTG 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +++ ++G+PNVGKSTL+N LLGE+RV+ +D GTTRD+I+ FE K Y+LIDTAG
Sbjct: 175 SKGVRIGVIGRPNVGKSTLVNRLLGEDRVVVFDEAGTTRDAIEIPFERRGKPYVLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR E+ EKFS+IKTL +I E++VVI++LD + QD+++ +++ +GR+L++
Sbjct: 235 IRRRKNVSEIAEKFSIIKTLDAIKESHVVIMVLDGSSGLVEQDLHLLDYVLTTGRALVLA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + ++ +K++L F +A +FISA+ + SI+ +D++ H
Sbjct: 295 VNKWDGLESEAKDKMRAEVKRRLGFADYAELHFISALHGTAVGDLYPSIDRAFDAANAHW 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+R+T L A+ +PP + R KLR AHQGG NPPIIV+HGN+ + + Y+RYL
Sbjct: 355 STNRLTTLLQDAVSQNPPPMVQGRRIKLRMAHQGGSNPPIIVVHGNQTESLPEAYRRYL 413
>gi|309782317|ref|ZP_07677044.1| ribosome-associated GTPase EngA [Ralstonia sp. 5_7_47FAA]
gi|308918935|gb|EFP64605.1| ribosome-associated GTPase EngA [Ralstonia sp. 5_7_47FAA]
Length = 376
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/349 (51%), Positives = 258/349 (73%), Gaps = 4/349 (1%)
Query: 72 MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISL 130
M KQT+QA++E+D++IFIVDGR GL QD++I ++LRK+G+ I+L +NK+E + ++++
Sbjct: 1 MAKQTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNKAEGMRYTAVAS 60
Query: 131 DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGK 190
DFYELG+G+P ISA +G+G+ + + L +L + + + E + H ++AIVG+
Sbjct: 61 DFYELGLGDPAAISAAHGDGVNDLVAEAL--DLAFAERPELAEAADAHD-HGTRIAIVGR 117
Query: 191 PNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVI 250
PNVGKSTL+N+L+GE RVI +D PGTTRD+I FE N K Y LIDTAG+R+R K FE I
Sbjct: 118 PNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAI 177
Query: 251 EKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQ 310
EKFSV+KTL+SI +ANVV+L+LDAQQ+IS QD +IA FI ESGR+L++ VNKWD + +
Sbjct: 178 EKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIGVNKWDGLTGHA 237
Query: 311 RKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALIS 370
R IK+++++KL FLSFA ++ISA + I + M+S++ Y ++++ L T ++TR L+
Sbjct: 238 RDRIKHDMERKLQFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKLPTPKLTRVLME 297
Query: 371 AIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
A++ P R + RPKLRYAHQGG NPPI+VIHGN L I Y+RYLE
Sbjct: 298 AVEYQQPRRAGVSRPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRYLE 346
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 22/185 (11%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N L + + PG TRD Y + K + +IDT G
Sbjct: 112 IAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLR--- 168
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
K+G + E + +T Q+I ++++++ I+D +Q + +QD I F+ +SG+ +V+ +N
Sbjct: 169 KRGKVFEAIEKFSVVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRALVIGVN 228
Query: 120 K--------SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENI------LTIELPY 165
K + I + L N H ISA GI ++++ ++LP
Sbjct: 229 KWDGLTGHARDRIKHDMERKLQFLSFANVHYISAKERTGIGALMKSVDAAYAAAMVKLPT 288
Query: 166 KKFFK 170
K +
Sbjct: 289 PKLTR 293
>gi|77164340|ref|YP_342865.1| small GTP-binding protein domain-containing protein [Nitrosococcus
oceani ATCC 19707]
gi|254434862|ref|ZP_05048370.1| GTPase, putative [Nitrosococcus oceani AFC27]
gi|123757906|sp|Q3JCW1.1|DER_NITOC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|76882654|gb|ABA57335.1| Small GTP-binding domain protein [Nitrosococcus oceani ATCC 19707]
gi|207091195|gb|EDZ68466.1| GTPase, putative [Nitrosococcus oceani AFC27]
Length = 464
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/419 (47%), Positives = 287/419 (68%), Gaps = 8/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ LVGRPNVGKSTLFNRLT SRDALV + PG+TRDR YG + G++SF ++DTGG
Sbjct: 1 MNALVALVGRPNVGKSTLFNRLTRSRDALVVDQPGVTRDRKYGLAHYGEQSFFVVDTGGV 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + GI M Q + AI E+D+I F+VDGR+GL D+ I +LR + +P+ LVINK
Sbjct: 61 M-EQESGIGRLMRAQAQLAIEEADVIFFLVDGREGLSSLDEEIAAWLRCAQKPLKLVINK 119
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E + ++ +FY LG+G P IISA G G+ LE +LT ++E + I +
Sbjct: 120 AEGRDGDLVASEFYRLGLGEPIIISAQQGQGVGRLLEALLT-----LLPVLEREESEIQA 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++ A++G+PNVGKSTL+N +LGE RV++ + PGTTRDSI F ++ K Y L+DTAG
Sbjct: 175 -KGLQFAVIGRPNVGKSTLVNRILGEERVLSSEIPGTTRDSISIPFRHHGKDYTLVDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR++ + +EKFSVI++L+SI A VVIL++DA ++ QD+++A I ESG+ +++
Sbjct: 234 IRRRSRILDKVEKFSVIQSLQSIAIAQVVILVIDAHDSVVEQDLHLAGVILESGKGVVIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + QR+ +K ++ ++L FL FA +FISA+ + + SI+ Y S+ HL
Sbjct: 294 VNKWDGLPLEQRQRVKTDLDRRLPFLVFARIHFISALHGSGVGDLFPSIDEAYQSANSHL 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T + RAL++A++ +PP K R KLRYAHQGG+NPP I+IHGN+ + + +Y+RYL
Sbjct: 354 PTGELNRALLAAVEKYPPPVVKGRRIKLRYAHQGGQNPPKIIIHGNQAEAVSANYRRYL 412
>gi|350563231|ref|ZP_08932053.1| ribosome-associated GTPase EngA [Thioalkalimicrobium aerophilum
AL3]
gi|349779095|gb|EGZ33442.1| ribosome-associated GTPase EngA [Thioalkalimicrobium aerophilum
AL3]
Length = 475
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/419 (44%), Positives = 279/419 (66%), Gaps = 6/419 (1%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ LVGRPNVGKSTLFNRLT +RDA+VA++PGLTRDR YG G +G +I++DTGG
Sbjct: 3 KPIIALVGRPNVGKSTLFNRLTKTRDAIVADFPGLTRDRQYGTGKVGSSEYIVVDTGGLS 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
E G+ M Q +QAI ES I F+VDGR G+ D+ I N++R G+P+ +++NK+
Sbjct: 63 GE-DLGVDSLMAGQVQQAIAESHGIFFLVDGRAGITPADEAIANYIRGFGKPVQVLVNKT 121
Query: 122 ENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
E N ++ + +FY LG+G P IS+ +G+ + ++ ++ +P + +++ ++
Sbjct: 122 EGCNLAVLTAEFYALGLGEPIGISSAHGDNVAEAVDELIE-RMPETE---EQQSFDLDEH 177
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+VA++G+PNVGKSTLIN +LGE+RV+ +D PGTTRDSI FE + + Y LIDTAG+
Sbjct: 178 PGIRVAVIGRPNVGKSTLINRMLGEDRVVAFDMPGTTRDSIYVPFERDGQAYTLIDTAGV 237
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR K E IEKFSV+K ++++ +A+VV++L+D + I+ QD+ + ESGR L++ V
Sbjct: 238 RRRKKVSEKIEKFSVLKAIEAMQDAHVVVMLMDGSEGITDQDLTLLGLAIESGRGLVLAV 297
Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD + +QR IK+ + +L F+S+A + ISA+ + + SI VY ++ +S
Sbjct: 298 NKWDGLDSDQRAKIKHELDLRLQFISYAKTHLISALHGSGVGDLFSSIKKVYRAATQKVS 357
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+ + R L AI +H P R K+RYAH GG NPP ++IHGN+L YKRYLE
Sbjct: 358 TADLNRVLEQAILDHQPPLVGGRRLKMRYAHLGGLNPPRVIIHGNKLDKTPAPYKRYLE 416
>gi|212710611|ref|ZP_03318739.1| hypothetical protein PROVALCAL_01677 [Providencia alcalifaciens DSM
30120]
gi|422017496|ref|ZP_16364061.1| GTP-binding protein Der [Providencia alcalifaciens Dmel2]
gi|212686692|gb|EEB46220.1| hypothetical protein PROVALCAL_01677 [Providencia alcalifaciens DSM
30120]
gi|414105646|gb|EKT67203.1| GTP-binding protein Der [Providencia alcalifaciens Dmel2]
Length = 492
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/442 (44%), Positives = 289/442 (65%), Gaps = 25/442 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + FIIIDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M Q+ QAI E+D+++F+VD R GL+ D+ I LR + LV NK
Sbjct: 61 DG-TEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL---------TIELP------ 164
++ I+++I + DFY LG+G + I+A +G G+ +E+ L IEL
Sbjct: 120 TDGIDANIVVGDFYSLGLGEIYPIAASHGRGVTQLIEHSLKPFIEVEDEEIELTDEEANA 179
Query: 165 --YKKFFKKKEFTNIHSIEY------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGT 216
+ + + E + ++ IK+AIVG+PNVGKSTL N +LGE+RV+ +D PGT
Sbjct: 180 AYWAELEAEGELSEEDEDDFDPSTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVFDMPGT 239
Query: 217 TRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
TRDSI E + ++YILIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L++DA++
Sbjct: 240 TRDSIYIPMERDEREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDARE 299
Query: 277 NISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAI 336
IS QD+++ FI +GRSL++ VNKWD + R+ +K+ ++ +L F+ FA +FISA+
Sbjct: 300 GISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDREHVKDMLELRLGFVDFARIHFISAL 359
Query: 337 KLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKN 396
+ + + ES+ Y+S+ + T+ +TR + A H P + R K++YAH GG N
Sbjct: 360 HGSGVGNLFESVQEAYESATRRVGTALLTRIMKMAEDEHQPPLIRGRRVKMKYAHAGGHN 419
Query: 397 PPIIVIHGNRLKYIGNDYKRYL 418
PPI+VIHGN++ + + YKRYL
Sbjct: 420 PPIVVIHGNQVSDLPDSYKRYL 441
>gi|350561453|ref|ZP_08930291.1| ribosome-associated GTPase EngA [Thioalkalivibrio thiocyanoxidans
ARh 4]
gi|349780485|gb|EGZ34803.1| ribosome-associated GTPase EngA [Thioalkalivibrio thiocyanoxidans
ARh 4]
Length = 469
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/420 (44%), Positives = 274/420 (65%), Gaps = 2/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN+LT SRDALVA+ PGLTRDR YG G +G ++++DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTRSRDALVADLPGLTRDRQYGIGRVGGFPYMVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + M +QT+QAI E+D+++ +VD R GL QD+ I + LR G +LV NK
Sbjct: 61 SGE-DATMDAAMAQQTRQAIREADLVLLLVDARSGLTAQDQAIASDLRAEGVRALLVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ S + +F+ LG+G I+A +G G+ ++ + P T +
Sbjct: 120 TDGLDIDSATAEFHALGLGAIAPIAAAHGRGVSQLMQRVHDALAPNGDDGAADPGTALDR 179
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I+VA+VG+PN GKSTLIN LLGE RV+ GTTRDSI F+ + + Y LIDTAG
Sbjct: 180 WPGIRVALVGRPNAGKSTLINRLLGEERVLATPIAGTTRDSIFIPFQRDGQDYTLIDTAG 239
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + + +EKFSV+KTL++I A+VVI++LDAQ I+ QD ++ + ++GR+L++
Sbjct: 240 VRRRARVHDAVEKFSVVKTLQAIDAAHVVIMVLDAQAGIADQDAHLLGMVLDAGRALVLA 299
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R+ ++ ++++KL FL FA +SA+ N+ ++ + + S+ + L
Sbjct: 300 VNKWDGLDPDVRERVRLDLERKLGFLRFARMRLVSALHGTNVGHLLDDVREAHASAFVEL 359
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST +++R L SA+ H P R KLRYAHQGG+NPP+IVIHGN+ + + Y+R+LE
Sbjct: 360 STPQLSRLLESAVAEHAPPLVGHRRIKLRYAHQGGQNPPVIVIHGNQTESLPGSYRRFLE 419
>gi|375109384|ref|ZP_09755632.1| GTP-binding protein Der [Alishewanella jeotgali KCTC 22429]
gi|374570474|gb|EHR41609.1| GTP-binding protein Der [Alishewanella jeotgali KCTC 22429]
Length = 498
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 287/443 (64%), Gaps = 26/443 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGR NVGKSTLFNRLT +RDALVA++PGLTRDR YG FI++DTGG
Sbjct: 1 MLPVVALVGRANVGKSTLFNRLTRTRDALVADFPGLTRDRKYGSVKFEGMEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ +AI E+D+++F+VD R G D I +RK +P+ LV NK
Sbjct: 61 DGN-EQGIEVEMAEQSLKAIAEADVVLFMVDARAGATVGDTAIAAHIRKVEKPVFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNF----------------LENILTIEL 163
++ +++ ++ DFY LG+G + I+A +G G+ + +E +
Sbjct: 120 TDGLDADTAIADFYSLGMGEVYPIAAAHGRGVTSLLQLALLPFLQQQLPAAVEGEAQEDA 179
Query: 164 PYKKFFKKKEFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
+ + KE T + E+IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 EFVESADFKEMTEEEAEAEAARLRSEHIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 239
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI + N++ Y LIDTAG+RRR K +++EKFSV+KTL++I +ANVV+L+LDA+
Sbjct: 240 TTRDSIYIPMQRNDRNYTLIDTAGVRRRGKIDDMVEKFSVVKTLQAIEDANVVVLVLDAR 299
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
Q IS QD++I F+ +GRSL++ VNKWD + + + IK + ++L F+ FA +FISA
Sbjct: 300 QGISDQDLSILGFVLNAGRSLVLAVNKWDGLNDSVKDEIKRELDRRLGFIDFARLHFISA 359
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ +DS+ +STS +TR + A ++H P R KL+YAH GG
Sbjct: 360 LHGSGVGNLFESVEEAFDSATKRVSTSLLTRIMKMAQEDHQPPMVAGRRVKLKYAHAGGY 419
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPIIVIHGN++K + + YKRYL
Sbjct: 420 NPPIIVIHGNQVKDLPDSYKRYL 442
>gi|400287786|ref|ZP_10789818.1| GTP-binding protein Der [Psychrobacter sp. PAMC 21119]
Length = 473
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 281/421 (66%), Gaps = 11/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+KPV+ L+GRPNVGKSTLFN+ T SR ALVA+ GLTRDR YG+ K+FI++DTGG
Sbjct: 3 IKPVVALIGRPNVGKSTLFNQFTKSRQALVADLSGLTRDRQYGDAVYEGKAFIVVDTGGI 62
Query: 61 -EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
E + G + + M++Q+ AI E+DII+F+VD R G++ D I FL G+P+ +V
Sbjct: 63 GEADDGSGNIDDYMSEQSHTAIHEADIIVFVVDARAGMIGADAEIGKFLHTLGKPVYVVA 122
Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
NK + ++ S +FY LG+G P+ ++A +G G+ N LE ILT ++P E +
Sbjct: 123 NKVDGVHDSAPAEFYALGLGEPYPMAASHGRGVGNLLE-ILTADMP--------EQDAMV 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI ++ + K Y+LIDTA
Sbjct: 174 EPRGLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPYKRDGKDYVLIDTA 233
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFSVIKTL++I ++NV ++++DA + I QD+++ + ++GR+L+V
Sbjct: 234 GVRRRGKIDEKVEKFSVIKTLQAIEDSNVTVIVIDAHEGIVDQDLHMIGYALDAGRALVV 293
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + +QR IK + ++ NF+ + + ISA+ + + SI Y SS+
Sbjct: 294 AINKWDGLTQDQRDYIKIEMDRRFNFIPYVKVHLISALHGTGVGNLYPSILRAYQSSMFE 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST+R+T+ L A+ +PP R KLRYAH GG NPP+IVIHGN+ + Y+RYL
Sbjct: 354 VSTNRLTQILQDAVTANPPPTVAGRRIKLRYAHIGGHNPPVIVIHGNQTGSLPKSYQRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|392552317|ref|ZP_10299454.1| GTP-binding protein Der [Pseudoalteromonas spongiae UST010723-006]
Length = 492
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/441 (44%), Positives = 286/441 (64%), Gaps = 24/441 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQASYEDYEFILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+DI++F+VD R GL D I + LRK + + +V NK
Sbjct: 61 DGS-EQGIESEMAEQSLLAIEEADIVMFLVDARAGLTASDIGIADHLRKQQKKVFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT------------------- 160
+ I++ S +FY+L +G + I+A +G GI + L+ L
Sbjct: 120 IDGIDADSNCAEFYQLALGEVYQIAAAHGRGITSLLDTALQPVIAEYAEAYREANPEEFE 179
Query: 161 ---IELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTT 217
++ Y + +E HS + +K+AI+G+PNVGKSTL N +LGE RVI YD PGTT
Sbjct: 180 DDLVDSLYDDENEGEEVDGEHSDKPVKLAIIGRPNVGKSTLTNRILGEERVIVYDMPGTT 239
Query: 218 RDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN 277
RDS+ N K+Y+LIDTAG+R+R K +V+EKFSVIKTLK+I +ANVV+L++DA++
Sbjct: 240 RDSVYIPMTRNEKEYVLIDTAGVRKRKKVSDVVEKFSVIKTLKAIEDANVVLLVIDAREG 299
Query: 278 ISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIK 337
IS QD+++ + +GRSL++ VNKWD + + + IK+ + ++L F+ FA +FISA+
Sbjct: 300 ISDQDLSLLGYTLNAGRSLVIAVNKWDGLDTDVKDRIKSELDRRLGFIDFARIHFISALH 359
Query: 338 LNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNP 397
+ ES++ Y+S+ +ST+ + R + A +H P + R KL+YAH GG NP
Sbjct: 360 GTGVGHLFESVDEAYESATKRISTAMLRRIMDMAQADHQPPLVRGRRVKLKYAHAGGYNP 419
Query: 398 PIIVIHGNRLKYIGNDYKRYL 418
PIIVIHGN++K + + YKRY+
Sbjct: 420 PIIVIHGNQVKDLPDSYKRYM 440
>gi|218708645|ref|YP_002416266.1| GTP-binding protein EngA [Vibrio splendidus LGP32]
gi|407071970|ref|ZP_11102808.1| GTP-binding protein Der [Vibrio cyclitrophicus ZF14]
gi|254783178|sp|B7VJU2.1|DER_VIBSL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|218321664|emb|CAV17618.1| GTP-binding protein engA [Vibrio splendidus LGP32]
Length = 493
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 288/445 (64%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D I LR+ +P +LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
+ I+ + S DF++LG+ + + I+A +G G+ ++ L P+ + K +
Sbjct: 120 VDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN---PFAEALKAENGEVSDL 176
Query: 173 -----------EFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
+FT + + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TEFEDEEEEQVDFTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR E +EKFSV+KTLK+I +ANVV+LL+D
Sbjct: 237 PGTTRDSIYIPMQRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAIEDANVVLLLID 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F +GRS+++ VNKWD + ++ + +K + ++L F+ FA +FI
Sbjct: 297 ARENISDQDLSLLGFALNAGRSIVIAVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN+++ + + YKR+L
Sbjct: 417 GYNPPIIVIHGNQVRNLPDSYKRFL 441
>gi|90021085|ref|YP_526912.1| GTP-binding protein EngA [Saccharophagus degradans 2-40]
gi|123396308|sp|Q21KS9.1|DER_SACD2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|89950685|gb|ABD80700.1| Small GTP-binding protein domain [Saccharophagus degradans 2-40]
Length = 471
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/420 (47%), Positives = 276/420 (65%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P L LVGRPNVGKSTLFNRLT SRDA+VAN+ GLTRDR YGE G K FI++DTGG
Sbjct: 1 MIPTLALVGRPNVGKSTLFNRLTRSRDAIVANFSGLTRDRQYGEATHGDKRFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E ++GI M Q+ QAI E+D++ FIVD R GL D I LR +PI L+ NK
Sbjct: 61 SGE-EEGIDSYMAGQSLQAIEEADMVAFIVDARVGLTAADMQIAQHLRTCNKPIFLLANK 119
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +N SI F+ELG+G+ I+A +G I L+ +L P + E +
Sbjct: 120 VDGVNESIVCAPFFELGLGDVIGIAAAHGRNINTMLDTVLENVEP------EAEASEEDK 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK+AIVG+PNVGKSTL+N +LGE+RV+ YD PGTTRDSI +E + K Y +IDTAG
Sbjct: 174 AKGIKLAIVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSIYIEYERDGKAYTIIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR +EKFS++KTL++I +ANVVIL++DAQ+ I QD+++ + +SGR+L+V
Sbjct: 234 VRRRKNIKLSVEKFSIVKTLQAIDDANVVILVMDAQEGIVDQDLHLMGHVIDSGRALVVA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ ++ + +K + ++L F+ FA +FISA+ + +S++ Y S+ L
Sbjct: 294 LNKWDNLDNDHKSYVKTELSRRLQFVDFADLHFISALHGTGVGDLYKSVHKAYSSATEKL 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T+ +T+ L A+ H P R KLRYAH GG+NPPIIVIHGN+ + +Y RYLE
Sbjct: 354 NTNFLTKILEFAVSQHQPPLVNGRRIKLRYAHAGGQNPPIIVIHGNQTAAVPKNYVRYLE 413
>gi|406038663|ref|ZP_11046018.1| GTP-binding protein Der [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 469
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/420 (44%), Positives = 287/420 (68%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + GI M +Q+K AI E+DIIIF+VD R GL+ D+ I +R G+ I LV NK
Sbjct: 61 -GESEAGIDAYMAEQSKTAINEADIIIFVVDARAGLLASDEQIAREIRSLGKKIYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ ++ +FY+LG G P ++A +G G+ LE++L ++P + ++ +
Sbjct: 120 VDGVHAEAAVVEFYKLGFGEPIHVAASHGRGVAQMLEDVLE-DVPEDENPEEHDKNT--- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI +E + ++Y LIDTAG
Sbjct: 176 --GLRLAIIGRPNVGKSTLVNRLLGEERVVAFDEPGTTRDSIYIPYERDGRQYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E+IEKFS++KTL++I +A+V++++LDA++ + QD+++ + E+GR+++V
Sbjct: 234 VRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVVA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ RK K ++ ++ +F+ +A + ISA+ + SI+ YDSS + +
Sbjct: 294 INKWDNMTEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGELYPSIHRAYDSSHLKV 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
S +++T+ L A H P R K+RYAH GG+NPP IVIHGN++ DY+RYLE
Sbjct: 354 SPAKLTQILNDATDAHQPPMISGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413
>gi|56461130|ref|YP_156411.1| GTP-binding protein EngA [Idiomarina loihiensis L2TR]
gi|81821723|sp|Q5QYB3.1|DER_IDILO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56180140|gb|AAV82862.1| GTPase EngA [Idiomarina loihiensis L2TR]
Length = 479
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/428 (45%), Positives = 283/428 (66%), Gaps = 11/428 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI+IDTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYQFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM KQ+ A+ E+D+++F+VD R G+ D+ I + LRK + + LV NK
Sbjct: 61 HGD-EEGIDEEMAKQSLLAVDEADVVLFMVDARDGVTVGDQAIADHLRKQNKKVYLVCNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
+ I++ S DFY L +G + I+A +G G++ LE I Y K+ +
Sbjct: 120 IDGIDAHSAMADFYSLSLGELYGIAAAHGRGVEQLLEICFKPIAEEYPDVIVPKDVASEE 179
Query: 179 ----SIEY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
I+Y +K+AIVG+PNVGKSTLIN +LGE RV+ YD PGTTRDS+ + N +
Sbjct: 180 LEHDEIDYDKLPLKLAIVGRPNVGKSTLINRILGEERVVVYDMPGTTRDSVYIPMQRNER 239
Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
+Y+LIDTAG+RRR + E IEKFSV+KTL++I +ANVV++++DA++ IS QD+N+ F
Sbjct: 240 EYVLIDTAGVRRRGRIGEAIEKFSVVKTLQAIEDANVVLIVVDARETISDQDLNLIGFAL 299
Query: 291 ESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
+GRS+++ VNKWD + ++ ++ IK + ++L F+ FA +FISA+ + ES+
Sbjct: 300 NAGRSIVIAVNKWDGLQNDHKEEIKRELDRRLGFVDFARLHFISALHGTGVGHLFESVEE 359
Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYI 410
Y S+ +STS++T+ + A + H P R KL+YAH GG NPP I+IHGN++K +
Sbjct: 360 AYASATQRISTSKLTKIMEMAQEEHQPPLVSGRRVKLKYAHAGGYNPPRIIIHGNQVKDL 419
Query: 411 GNDYKRYL 418
Y+RYL
Sbjct: 420 PGAYQRYL 427
>gi|84387629|ref|ZP_00990646.1| GTP-binding protein EngA [Vibrio splendidus 12B01]
gi|84377474|gb|EAP94340.1| GTP-binding protein EngA [Vibrio splendidus 12B01]
Length = 493
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 286/445 (64%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D I LR+ +P +LV+NK
Sbjct: 61 D-GTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKK------- 172
+ I+ + S DF++LG+ + + I+A +G G+ ++ L P+ + K +
Sbjct: 120 VDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN---PFAEALKAENGEVSDL 176
Query: 173 -----------EFTNIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
+FT + + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TEFEDEEEEQVDFTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR E +EKFSV+KTLK+I +ANVV+LL+D
Sbjct: 237 PGTTRDSIYIPMQRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAIEDANVVLLLID 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A+ NIS QD+++ F +GRS+++ VNKWD + + + +K + ++L F+ FA +FI
Sbjct: 297 ARDNISDQDLSLLGFALNAGRSIVIAVNKWDGLDSDVKDRVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN+++ + + YKR+L
Sbjct: 417 GYNPPIIVIHGNQVRNLPDSYKRFL 441
>gi|388257755|ref|ZP_10134934.1| GTP-binding protein EngA [Cellvibrio sp. BR]
gi|387938922|gb|EIK45474.1| GTP-binding protein EngA [Cellvibrio sp. BR]
Length = 468
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/419 (47%), Positives = 282/419 (67%), Gaps = 10/419 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
PV+ LVGRPNVGKSTLFNRLT SRDALVA+YPGLTRDR YGEG + + FI+IDTGG
Sbjct: 4 PVIALVGRPNVGKSTLFNRLTQSRDALVADYPGLTRDRKYGEGILENRRFIVIDTGGISG 63
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
E ++GI M Q+ AI E+DI++FIVD R GL D+ I LR + + LV NK +
Sbjct: 64 E-EEGIDSMMAGQSLLAIQEADIVLFIVDSRAGLNPADETIAKHLRVNNKKTYLVANKID 122
Query: 123 NINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELP-YKKFFKKKEFTNIHSI 180
+ I+L FYELG+G + +A +G G+++ +E +L E+P + + ++ + T I
Sbjct: 123 GTDPDIALAPFYELGLGEVYPTTASHGRGVRSLMEEVLA-EIPEFPEDYQPDDATGI--- 178
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
K+AIVG+PNVGKSTL+N LLGE+RV+ YD PGTTRDSI + +K Y +IDTAG+
Sbjct: 179 ---KIAIVGRPNVGKSTLVNRLLGEDRVVVYDEPGTTRDSIYINYTRFDKPYTIIDTAGV 235
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR ++EKFS++KT+++I +ANVV+L++DA + + QD+++ E+GR+L++ +
Sbjct: 236 RRRKNIDLMVEKFSIVKTMQAIADANVVVLVMDASEGVVEQDLHLMGTTIEAGRALVIAL 295
Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD + ++ +KN I+++L F+ FA +FISA+ + + +SI Y S+ S
Sbjct: 296 NKWDGLDDAHKQYVKNEIERRLRFVDFATIHFISALHGTGVGNLYKSIELAYQSATDKFS 355
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+ +TR L A++ H P + R KLRYAH GG NPPIIVIHGN+ + + Y +YLE
Sbjct: 356 TNYLTRILQDAVREHQPPMIQGRRIKLRYAHPGGHNPPIIVIHGNQTNDVPSHYTKYLE 414
>gi|261212137|ref|ZP_05926423.1| GTP-binding protein EngA [Vibrio sp. RC341]
gi|260838745|gb|EEX65396.1| GTP-binding protein EngA [Vibrio sp. RC341]
Length = 494
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/445 (43%), Positives = 289/445 (64%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR+ +P +LV+NK
Sbjct: 61 DGS-EEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE-----F 174
+ I++ + S +F++LG+ + I+ +G G+ ++ L P+ + + ++
Sbjct: 120 VDGIDADAASAEFWQLGMDQMYQIATAHGRGVGALIDRALN---PFAEQMESEQAQLEDL 176
Query: 175 TNIHSIEY---------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
TN E IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 177 TNEEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + + ++Y+LIDTAG+RRR + E +EKFSV+KTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVD 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F SGRS+++ VNKWD + + ++ +K + ++L F+ FA +FI
Sbjct: 297 ARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSIDVKEHVKKELDRRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN++ + + YKRYL
Sbjct: 417 GYNPPIIVIHGNQVNELPDSYKRYL 441
>gi|359783466|ref|ZP_09286680.1| GTP-binding protein Der [Pseudomonas psychrotolerans L19]
gi|359368683|gb|EHK69260.1| GTP-binding protein Der [Pseudomonas psychrotolerans L19]
Length = 495
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/438 (44%), Positives = 281/438 (64%), Gaps = 21/438 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+VA++ GLTRDR YGE +++I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKTRDAIVADFAGLTRDRKYGEAKWQGRTYIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QAI ESD ++F+VD R G+ D++I LRK + LV NK
Sbjct: 61 SGD-EEGIDLKMAEQSLQAIEESDAVLFLVDSRDGMTVADQMIAEHLRKRNKRTFLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE------ 173
+ ++ I+ +F L IG+ I+A +G G+ N LE L + P + ++
Sbjct: 120 VDTVDPEIARAEFSPLAIGDAFPIAAAHGRGVNNLLEAALGV-FPKDEVEVEELSEEQVR 178
Query: 174 ---------FTNIHSIEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
F + I+ IK+A++G+PNVGKSTL+N +LGE RVI YD GTTRDSI
Sbjct: 179 AAAEEGGDVFRRVQGIDETTGIKIAVIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSI 238
Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
FE N ++Y LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ +
Sbjct: 239 YIPFERNEERYTLIDTAGVRRRGKVFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEH 298
Query: 282 DINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNI 341
D+N+ F+ E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ +
Sbjct: 299 DLNLLGFVLETGRALVIALNKWDGMESGERDYVKTELERRLLFVDFADIHFISALHGTGV 358
Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIV 401
+S+ + S+ TSR+T+ L A++ H P R KLRYAH GG NPP+IV
Sbjct: 359 GHLYKSVQQSFASATTRWPTSRLTQILEDAVQEHQPPMVSGRRIKLRYAHLGGANPPLIV 418
Query: 402 IHGNRLKYIGNDYKRYLE 419
IHGN+ + + Y RYLE
Sbjct: 419 IHGNQTEAVPKSYTRYLE 436
>gi|359787056|ref|ZP_09290127.1| GTP-binding protein EngA [Halomonas sp. GFAJ-1]
gi|359295706|gb|EHK59969.1| GTP-binding protein EngA [Halomonas sp. GFAJ-1]
Length = 467
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/419 (44%), Positives = 277/419 (66%), Gaps = 7/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G KS+ +IDTGG
Sbjct: 1 MTPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGGKSYTVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+DI++F+VD R GL D+ I N LR + + LV+NK
Sbjct: 61 SGD-EEGIDAAMAEQSLAAIDEADIVLFLVDARAGLNVADEAIANHLRVNQKKTWLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + S DF++LG+G+P I+A +G + ++ +L P+ + +
Sbjct: 120 TDGLEEHSAMADFWKLGLGDPWPIAAAHGRNVSLLIDTVLE---PFPE--RDASIPADTG 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++ ++G+PNVGKSTL+N LLGE RV+ +D GTTRD+I+ FE N K Y+LIDTAG
Sbjct: 175 SKGIRIGVIGRPNVGKSTLVNRLLGEERVVVFDEAGTTRDAIEIPFERNGKPYVLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR E+ EKFS+IKTL +I E +V +++LDA+ + QD+++ +++ +GR+L++
Sbjct: 235 IRRRKNVREIAEKFSIIKTLDAIKECHVAVMVLDARSGLVEQDMHLLDYVLTTGRALVLA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + + ++ ++ IK++L F +A +FISA+ + SI ++++ H
Sbjct: 295 INKWDGLESDAKEKMRAEIKRRLGFADYAEIHFISALHGTAVGDLYPSIERAFNAANAHW 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+R+T L A+ HPP R KLR AHQGG NPPIIV+HGN+ + Y+RYL
Sbjct: 355 STNRLTTLLQDAVSQHPPPMVNGRRIKLRMAHQGGSNPPIIVVHGNQTASLPEAYRRYL 413
>gi|146293744|ref|YP_001184168.1| GTP-binding protein EngA [Shewanella putrefaciens CN-32]
gi|386314493|ref|YP_006010658.1| ribosome-associated GTPase EngA [Shewanella putrefaciens 200]
gi|166225857|sp|A4Y8T6.1|DER_SHEPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|145565434|gb|ABP76369.1| small GTP-binding protein [Shewanella putrefaciens CN-32]
gi|319427118|gb|ADV55192.1| ribosome-associated GTPase EngA [Shewanella putrefaciens 200]
Length = 488
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/438 (44%), Positives = 280/438 (63%), Gaps = 24/438 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
+ I++ S +F+ LG+G + ++A G G+ N +E LT PY + ++ E
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT---PYAEAMGIERQGEEEV 176
Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+ +Y IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
I E ++Y++IDTAG+RRR+K +VIEKFSVIKTLK++ +ANVV+L++DA++ ++
Sbjct: 237 IYIPMEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296
Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA+
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416
Query: 401 VIHGNRLKYIGNDYKRYL 418
VIHGN++ + + YKRY+
Sbjct: 417 VIHGNQVSRLPDSYKRYM 434
>gi|71065252|ref|YP_263979.1| GTP-binding protein EngA [Psychrobacter arcticus 273-4]
gi|123649239|sp|Q4FTW3.1|DER_PSYA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71038237|gb|AAZ18545.1| putative GTP-binding protein, HSR1-related protein [Psychrobacter
arcticus 273-4]
Length = 473
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 284/421 (67%), Gaps = 11/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+KPV+ L+GRPNVGKSTLFN+ T SR ALVA+ GLTRDR YG+ K+FI++DTGG
Sbjct: 3 IKPVVALIGRPNVGKSTLFNQFTKSRQALVADLSGLTRDRQYGDATYEDKAFIVVDTGGI 62
Query: 61 -EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
E + +G + + M++Q+ AI E+DII+F+VD R G++ D I FL G+P+ +V
Sbjct: 63 GEADDGRGDIDDYMSEQSYTAIHEADIIVFVVDARAGMIGADAEIGKFLHTLGKPVYVVA 122
Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
NK + ++ S +FY LG+G P+ ++A +G G+ N LE +LT ++P ++ NI
Sbjct: 123 NKVDGVHDSAPAEFYALGLGEPYPMAASHGRGVGNLLE-VLTADMPNQE--------NII 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI ++ + K Y+LIDTA
Sbjct: 174 EPRGLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPYKRDGKDYVLIDTA 233
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFSVIKTL++I ++NV ++++DA + I QD+++ + ++GR+L+V
Sbjct: 234 GVRRRGKIDEKVEKFSVIKTLQAIEDSNVTVIVIDAHEGIVDQDLHMIGYALDAGRALVV 293
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + +Q+ IK + ++ NF+ + + ISA+ + + SI Y SS+
Sbjct: 294 AINKWDGLTADQKNYIKIEMDRRFNFIPYVKVHQISALHGTGVGNLYPSILRAYQSSMFE 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST+R+T+ L A+ +PP R KLRYAH GG NPP+IVIHGN+ + Y+RYL
Sbjct: 354 VSTNRLTQILQDAVTANPPPTVAGRRIKLRYAHIGGHNPPVIVIHGNQTGSLPKSYQRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|146308511|ref|YP_001188976.1| GTP-binding protein EngA [Pseudomonas mendocina ymp]
gi|166225842|sp|A4XY28.1|DER_PSEMY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|145576712|gb|ABP86244.1| small GTP-binding protein [Pseudomonas mendocina ymp]
Length = 492
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/434 (44%), Positives = 281/434 (64%), Gaps = 16/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+V + GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRSRDAIVGDLSGLTRDRQYGEAKWQGRTYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QAI E+D ++F+VD R G+ D++I LR+ + LV+NK
Sbjct: 61 SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDARAGMTASDQMIGEHLRRRNKRSFLVVNK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI--------------ELPY 165
+N++ ++ +F +G+G P I+ +G GI LE +L I E
Sbjct: 120 VDNLDVDLARAEFSPMGLGEPLAIAGAHGRGITQMLEAVLGIFPKDAGEPEEGAEAEEEV 179
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
++ + K + IK+AI+G+PNVGKSTL+N +LGE RVI YD GTTRDSI F
Sbjct: 180 QEGQEAKRIPGPSEKDGIKLAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIPF 239
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E +++KY LIDTAG+RRR K FE +EKFSV+KTL++I ++NVV+ ++DA++ + D+N+
Sbjct: 240 ERDDEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDSNVVVFVMDAREGVVDHDLNL 299
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F+ ESGR+L++ +NKWD + Q+ +K ++++L F+ FA +FISA+ +
Sbjct: 300 LGFVLESGRALVIALNKWDGMDQGQKDYVKTELERRLFFVDFADIHFISALHGTGVGHLY 359
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + S++ TSR+T+ L A+ +H P R KLRYAH GG NPP+IVIHGN
Sbjct: 360 KSVQAAFHSAVTRWPTSRLTQILEDAVSDHAPPLVNGRRIKLRYAHLGGANPPLIVIHGN 419
Query: 406 RLKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 420 QVDAVPRAYTRYLE 433
>gi|419954098|ref|ZP_14470239.1| GTP-binding protein Der [Pseudomonas stutzeri TS44]
gi|387969187|gb|EIK53471.1| GTP-binding protein Der [Pseudomonas stutzeri TS44]
Length = 494
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/436 (44%), Positives = 278/436 (63%), Gaps = 18/436 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEAKWQGRTYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QAI E+D ++F+VD R GL D++I LRK + LV NK
Sbjct: 61 SGD-EEGIDAKMAEQSLQAIEEADAVLFMVDSRAGLTAADQMIAEHLRKRNKRSFLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI----------------EL 163
+ ++ ++ +F LG+G+ I+A +G GI + L+ L I
Sbjct: 120 VDTVDPDLARAEFSPLGLGDALPIAAAHGRGISHMLDAALGIFPKDNAEEGEAVEGEVAE 179
Query: 164 PYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKS 223
+ + K + IK+AI+G+PNVGKSTL+N +LGE RVI YD GTTRDSI
Sbjct: 180 EVAQGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYI 239
Query: 224 LFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDI 283
FE +++KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ + D+
Sbjct: 240 PFERDDEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDL 299
Query: 284 NIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINS 343
N+ F+ E+GR+L++ +NKWD + ++ +K ++++L F+ FA +FISA +
Sbjct: 300 NLLGFVLETGRALVIALNKWDGMEQGEKDYVKTELERRLFFVDFADIHFISAKHGTGVGH 359
Query: 344 FMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIH 403
+S+ + S++ TSR+T+ L A++ H P R KLRYAH GG NPP+IVIH
Sbjct: 360 LYKSVQASFTSAVTRWPTSRLTQILEDAVREHQPPMVAGRRIKLRYAHLGGANPPLIVIH 419
Query: 404 GNRLKYIGNDYKRYLE 419
GN++ + Y RYLE
Sbjct: 420 GNQVDAVPKSYSRYLE 435
>gi|332140453|ref|YP_004426191.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
gi|332141960|ref|YP_004427698.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
gi|410862365|ref|YP_006977599.1| GTP-binding protein Der [Alteromonas macleodii AltDE1]
gi|238693251|sp|B4RV85.1|DER_ALTMD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|327550475|gb|AEA97193.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
gi|327551982|gb|AEA98700.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype']
gi|410819627|gb|AFV86244.1| GTP-binding protein Der [Alteromonas macleodii AltDE1]
Length = 481
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/434 (45%), Positives = 287/434 (66%), Gaps = 21/434 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+ K+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+D+++F+VD R GL+ D+ I + LR+ + I +V NK
Sbjct: 61 TGD-EEGIDAEMAQQSLLAIEEADVVLFLVDARAGLLPADQGIADHLRRINKQIFVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
+ I+ S S +FY LG+G I+A +G G+ L++ L P + F
Sbjct: 120 VDGIDGDSESAEFYSLGLGAIKQIAAAHGRGVSQLLQDALK---PLESDFPDMEIIDEAP 176
Query: 172 -------KEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+ + + IK+AIVGKPNVGKSTL N +LGE RV+ YD PGTTRDS+
Sbjct: 177 EEEEDAESQRQRLQELP-IKLAIVGKPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIP 235
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
E + ++YILIDTAG+R+R K E +EKFS++KTL++I EANVV+L++DA++ I+ QD++
Sbjct: 236 MERDEREYILIDTAGVRKRKKISEAVEKFSIVKTLQAIEEANVVLLVIDAREGITDQDLS 295
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ SGRSL+V VNKWD + + + IK + ++L F+ FA +FISA+ + + +
Sbjct: 296 LLGFVLNSGRSLVVAVNKWDGLSTDIKDDIKREMDRRLGFIDFARIHFISALHGSGVGNL 355
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
ES+ Y S+ ++T+ +T+ + A +H P + R K++YAH GG NPP+IVIHG
Sbjct: 356 FESVQEAYMSATKRINTALLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHG 415
Query: 405 NRLKYIGNDYKRYL 418
N++ + + YKR+L
Sbjct: 416 NQVDDLPSSYKRFL 429
>gi|92114975|ref|YP_574903.1| small GTP-binding protein [Chromohalobacter salexigens DSM 3043]
gi|123387342|sp|Q1QTK4.1|DER_CHRSD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|91798065|gb|ABE60204.1| Small GTP-binding protein protein [Chromohalobacter salexigens DSM
3043]
Length = 467
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/419 (44%), Positives = 273/419 (65%), Gaps = 7/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG G +G K++ +IDTGG
Sbjct: 1 MNPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGNGVLGDKTYTVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
++G+ M +Q+ AI E+DI++F+VDGR GL D+ I N LR + + LV+NK
Sbjct: 61 SGN-EEGLDAAMAEQSLLAIDEADIVLFMVDGRTGLNVADEAIANHLRVNQKKTWLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + S +F+ LG+G+P I+A +G + + ++ +L P + + +N
Sbjct: 120 TDGLEEHSAMAEFWRLGLGDPRPIAAAHGRNVTSLIDEVLAPFPPREANAAPPDLSN--- 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++ ++G+PNVGKSTL+N LLGE+RV+ YD GTTRD+I+ FE K Y+L+DTAG
Sbjct: 177 --GIRIGVIGRPNVGKSTLVNRLLGEDRVVVYDEAGTTRDAIEIPFERRGKPYVLVDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E EKFS+IKTL++I NV I++LDA+ + QD+++ +++ SGR+L++
Sbjct: 235 VRRRKNVSEAAEKFSIIKTLEAIKACNVAIMVLDARSGLVEQDLHLLDYVLSSGRALVLA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + ++ IK++L F +A +FISA+ + SI +DS+ H
Sbjct: 295 VNKWDGLEQEAKDKMRAAIKRRLGFADYAEMHFISALHGTAVGDLYPSITRAFDSANSHW 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+R+T L A+ H P R KLR AHQGG NPPIIV+HGN+ + YKRYL
Sbjct: 355 STNRLTTILQDAVSEHQPPLIHGRRIKLRMAHQGGSNPPIIVVHGNQTGSLPEAYKRYL 413
>gi|261345330|ref|ZP_05972974.1| ribosome-associated GTPase EngA [Providencia rustigianii DSM 4541]
gi|282566664|gb|EFB72199.1| ribosome-associated GTPase EngA [Providencia rustigianii DSM 4541]
Length = 491
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/441 (44%), Positives = 284/441 (64%), Gaps = 24/441 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + FIIIDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M Q+ QAI E+D+++F+VD R GL+ D+ I LR + LV NK
Sbjct: 61 DG-TEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT------------------- 160
++ I+++I + DFY LG+G + I+A +G G+ +E+ L
Sbjct: 120 TDGIDANIVVGDFYSLGLGEIYPIAASHGRGVTQLIEHSLKPFIEVEEEEVELTDEEANA 179
Query: 161 ---IELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTT 217
EL + +E S IK+AIVG+PNVGKSTL N +LGE+RV+ +D PGTT
Sbjct: 180 AYWAELEAESELSDEEDDFDPSTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVFDMPGTT 239
Query: 218 RDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN 277
RDSI E + ++YILIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L++DA++
Sbjct: 240 RDSIYIPMERDEREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDAREG 299
Query: 278 ISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIK 337
IS QD+++ FI +GRSL++ VNKWD + R +K+ ++ +L F+ FA +FISA+
Sbjct: 300 ISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDRDHVKDMLELRLGFVDFARIHFISALH 359
Query: 338 LNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNP 397
+ + + ES+ Y+S+ + T+ +TR + A H P + R K++YAH GG NP
Sbjct: 360 GSGVGNLFESVQEAYESATRRVGTALLTRIMKMAEDEHQPPLIRGRRVKMKYAHAGGHNP 419
Query: 398 PIIVIHGNRLKYIGNDYKRYL 418
PI+VIHGN++ + + YKRYL
Sbjct: 420 PIVVIHGNQVSDLPDSYKRYL 440
>gi|410637367|ref|ZP_11347947.1| GTP-binding protein [Glaciecola lipolytica E3]
gi|410142990|dbj|GAC15152.1| GTP-binding protein [Glaciecola lipolytica E3]
Length = 480
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/432 (45%), Positives = 283/432 (65%), Gaps = 16/432 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTNSRDALVA+YPGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNSRDALVADYPGLTRDRKYGQAKYEGLQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+ +++F+VD R GL D I N LRK + + +V NK
Sbjct: 61 SGD-EQGIDAEMAEQSLLAIDEAHVVLFLVDARAGLTPADIGIANHLRKQEKTVYVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFF--------- 169
+ I+ S + +FY LG+G ++A +G G+ LE L +E Y
Sbjct: 120 VDGIDGDSETAEFYSLGLGEISQVAAAHGRGVTQLLEKSLKPLEKSYPDMHIPEVVRNDD 179
Query: 170 ---KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ E + S+ IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDSI E
Sbjct: 180 GENAEAELQRLQSLP-IKLAIVGKPNVGKSTLTNRILGEERVVVFDMPGTTRDSIFIPME 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
++++YILIDTAG+R+R K + +EKFS+IKTL++I EANVV+L +DA++ I+ QD+++
Sbjct: 239 RDDREYILIDTAGVRKRKKVSDAVEKFSIIKTLQAIEEANVVLLCIDAREGIADQDLSLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F+ +GRSL++ VNKWD + + + IK + ++L F+ FA +FISA+ + E
Sbjct: 299 GFVLNAGRSLVIAVNKWDGLSKDIKDDIKRELDRRLGFVDFARIHFISALHGTGVGHLFE 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ Y S+ ++TS +TR + A ++H P + R K++YAH GG NPP+I+IHGN+
Sbjct: 359 SVQEAYASATKRINTSMLTRIMEMAQEDHQPPMVRGRRVKMKYAHAGGYNPPVIIIHGNQ 418
Query: 407 LKYIGNDYKRYL 418
++ + + YKRY+
Sbjct: 419 VEDLPDAYKRYM 430
>gi|407688440|ref|YP_006803613.1| GTP-binding protein Der [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407291820|gb|AFT96132.1| GTP-binding protein Der [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 481
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/433 (44%), Positives = 288/433 (66%), Gaps = 19/433 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+ K+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+D+++F+VD R G++ D+ I + LR+ + + +V NK
Sbjct: 61 TGD-EEGIDAEMAQQSLLAIEEADVVLFLVDARAGMLPADQGIADHLRRINKKVFVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
+ I+ S S +FY LG+G+ I+A +G G+ L++ L P + F
Sbjct: 120 VDGIDGDSESAEFYSLGLGDIKQIAAAHGRGVSQLLQDALK---PLESDFPDMEIVDEEP 176
Query: 172 ----KEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
T ++ IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDS+
Sbjct: 177 EEEEDAETQRQRLQELPIKLAIVGKPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIPM 236
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E + ++YILIDTAG+R+R K E +EKFS++KTL++I EANVV+L++DA++ I+ QD+++
Sbjct: 237 ERDEREYILIDTAGVRKRKKISEAVEKFSIVKTLQAIEEANVVLLVIDAREGITDQDLSL 296
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F+ SGRSL+V VNKWD + + + IK + ++L F+ FA +FISA+ + + +
Sbjct: 297 LGFVLNSGRSLVVAVNKWDGLSTDVKDDIKREMDRRLGFIDFARIHFISALHGSGVGNLF 356
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
ES+ Y S+ ++T+ +T+ + A +H P + R K++YAH GG NPP+IVIHGN
Sbjct: 357 ESVQEAYMSATKRINTALLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHGN 416
Query: 406 RLKYIGNDYKRYL 418
++ + + YKR+L
Sbjct: 417 QVDDLPSSYKRFL 429
>gi|392420167|ref|YP_006456771.1| GTP-binding protein Der [Pseudomonas stutzeri CCUG 29243]
gi|390982355|gb|AFM32348.1| GTP-binding protein Der [Pseudomonas stutzeri CCUG 29243]
Length = 492
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/435 (45%), Positives = 282/435 (64%), Gaps = 17/435 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEAKWQGRTYIVIDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QA+ E+D ++F+VD R G+ D++I LRK + LV NK
Sbjct: 61 TGD-EEGIDAKMAEQSLQAMQEADAVMFMVDARAGMTPGDQMIAEHLRKMNKRHFLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
++I+ I+ +F LG+G+ I+A +G GI + LE L + +
Sbjct: 120 VDSIDPDIARAEFSPLGLGDALPIAAAHGRGITHMLEQALGMFPKDNAEVAEAEGEEGET 179
Query: 168 FFKKKEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+ +E I + IK+AI+G+PNVGKSTL+N +LGE RVI YD GTTRDSI
Sbjct: 180 VAEGEELKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
FE ++ KY LIDTAG+RRR K FE +EKFSV+KTL++I ++NVVI ++DA++ + D+N
Sbjct: 240 FERDDAKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDSNVVIFVMDAREGVVEHDLN 299
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ ESGR+L++ +NKWD + ++R +K ++++L F+ FA +FISA + +
Sbjct: 300 LLGFVLESGRALVIALNKWDGMEPSERDYVKTELERRLFFVEFADIHFISAKHGTGVGNL 359
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
+S+ + S++ TSR+T+ L A++ H P R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQASFTSAVTRWPTSRLTQILEDAVREHAPPMVASRRIKLRYAHLGGANPPLIVIHG 419
Query: 405 NRLKYIGNDYKRYLE 419
N++ I Y RYLE
Sbjct: 420 NQVDSIPKSYTRYLE 434
>gi|406597499|ref|YP_006748629.1| GTP-binding protein Der [Alteromonas macleodii ATCC 27126]
gi|406374820|gb|AFS38075.1| GTP-binding protein Der [Alteromonas macleodii ATCC 27126]
Length = 481
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/433 (44%), Positives = 288/433 (66%), Gaps = 19/433 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+ K+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+D+++F+VD R G++ D+ I + LR+ + + +V NK
Sbjct: 61 TGD-EEGIDAEMAQQSLLAIEEADVVLFLVDARAGMLPADQGIADHLRRINKKVFVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
+ I+ S S +FY LG+G+ I+A +G G+ L++ L P + F
Sbjct: 120 VDGIDGDSESAEFYSLGLGDIKQIAAAHGRGVSQLLQDALK---PLESDFPDMEIIDEEP 176
Query: 172 ----KEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
T ++ IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDS+
Sbjct: 177 EEEEDAETQRQRLQELPIKLAIVGKPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIPM 236
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E + ++YILIDTAG+R+R K E +EKFS++KTL++I EANVV+L++DA++ I+ QD+++
Sbjct: 237 ERDEREYILIDTAGVRKRKKISEAVEKFSIVKTLQAIEEANVVLLVIDAREGITDQDLSL 296
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F+ SGRSL+V VNKWD + + + IK + ++L F+ FA +FISA+ + + +
Sbjct: 297 LGFVLNSGRSLVVAVNKWDGLSTDVKDDIKREMDRRLGFIDFARIHFISALHGSGVGNLF 356
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
ES+ Y S+ ++T+ +T+ + A +H P + R K++YAH GG NPP+IVIHGN
Sbjct: 357 ESVQEAYMSATKRINTALLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHGN 416
Query: 406 RLKYIGNDYKRYL 418
++ + + YKR+L
Sbjct: 417 QVDDLPSSYKRFL 429
>gi|336310635|ref|ZP_08565607.1| GTP-binding protein EngA [Shewanella sp. HN-41]
gi|335866365|gb|EGM71356.1| GTP-binding protein EngA [Shewanella sp. HN-41]
Length = 487
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/438 (44%), Positives = 280/438 (63%), Gaps = 24/438 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
+ I++ S +F+ LG+G + ++A G G+ N +E LT PY + ++ E
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT---PYAEAMGIERQGEEEV 176
Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+ +Y IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
I E ++Y++IDTAG+RRR+K +VIEKFSVIKTLK++ +ANVV+L++DA++ ++
Sbjct: 237 IYIPMEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296
Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA+
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIV 416
Query: 401 VIHGNRLKYIGNDYKRYL 418
VIHGN++ + + YKRY+
Sbjct: 417 VIHGNQVSKLPDSYKRYM 434
>gi|407700806|ref|YP_006825593.1| GTP-binding protein Der [Alteromonas macleodii str. 'Black Sea 11']
gi|407249953|gb|AFT79138.1| GTP-binding protein Der [Alteromonas macleodii str. 'Black Sea 11']
Length = 481
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/433 (44%), Positives = 288/433 (66%), Gaps = 19/433 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+ K+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+D+++F+VD R G++ D+ I + LR+ + + +V NK
Sbjct: 61 TGD-EEGIDAEMAQQSLLAIEEADVVLFLVDARAGMLPADQGIADHLRRINKKVFVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
+ I+ S S +FY LG+G+ I+A +G G+ L++ L P + F
Sbjct: 120 VDGIDGDSESAEFYSLGLGDIKQIAAAHGRGVSQLLQDALK---PLESDFPDMEIVDEEP 176
Query: 172 ----KEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
T ++ IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDS+
Sbjct: 177 EEEEDAETQRQRLQKLPIKLAIVGKPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIPM 236
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E + ++YILIDTAG+R+R K E +EKFS++KTL++I EANVV+L++DA++ I+ QD+++
Sbjct: 237 ERDEREYILIDTAGVRKRKKISEAVEKFSIVKTLQAIEEANVVLLVIDAREGITDQDLSL 296
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F+ SGRSL+V VNKWD + + + IK + ++L F+ FA +FISA+ + + +
Sbjct: 297 LGFVLNSGRSLVVAVNKWDGLSTDVKDDIKREMDRRLGFIDFARIHFISALHGSGVGNLF 356
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
ES+ Y S+ ++T+ +T+ + A +H P + R K++YAH GG NPP+IVIHGN
Sbjct: 357 ESVQEAYMSATKRINTALLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHGN 416
Query: 406 RLKYIGNDYKRYL 418
++ + + YKR+L
Sbjct: 417 QVDDLPSSYKRFL 429
>gi|296387686|ref|ZP_06877161.1| GTP-binding protein EngA [Pseudomonas aeruginosa PAb1]
gi|416875231|ref|ZP_11918575.1| GTP-binding protein Der [Pseudomonas aeruginosa 152504]
gi|334842200|gb|EGM20812.1| GTP-binding protein Der [Pseudomonas aeruginosa 152504]
Length = 493
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/435 (45%), Positives = 282/435 (64%), Gaps = 17/435 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QAI E+D ++F+VD R G+ D++I LRK + LV NK
Sbjct: 61 SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKRNKRSFLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
+ I+ ++ +F LG+G+ I+A +G GI + L+ L I E ++
Sbjct: 120 VDTIDPDLARAEFSPLGLGDALPIAAAHGRGINHMLQEALGIFPKDNAEEEGEGEPASEE 179
Query: 168 FFKKKEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+ +E T I + IK+AI+G+PNVGKSTL+N +LGE RVI YD GTTRDSI
Sbjct: 180 VAEGEEPTRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
FE N +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ + D+N
Sbjct: 240 FERNEEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLN 299
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ +
Sbjct: 300 LLGFVLETGRALVIALNKWDGMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
+S+ + S++ TSR+T L A++ H P R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQESFRSAVTRWPTSRLTSILEDAVQVHQPPMVNGRRIKLRYAHLGGANPPLIVIHG 419
Query: 405 NRLKYIGNDYKRYLE 419
N++ + Y RYLE
Sbjct: 420 NQVDAVPKAYTRYLE 434
>gi|127512226|ref|YP_001093423.1| GTP-binding protein EngA [Shewanella loihica PV-4]
gi|166225856|sp|A3QCG6.1|DER_SHELP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|126637521|gb|ABO23164.1| small GTP-binding protein [Shewanella loihica PV-4]
Length = 489
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/439 (43%), Positives = 283/439 (64%), Gaps = 25/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA+YPGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+D+++F+ D R GL D+ I LR+ + +V NK
Sbjct: 61 DG-TEEGIETRMAEQSLAAIEEADVVLFLTDARAGLTAADEAIAEHLRRREKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I++ S +F+ LG+G + ++A G G+ N +E LT PY +
Sbjct: 120 VDGIDADSACGEFWALGLGEVYQMAAAQGRGVTNMIEYALT---PYAEAMGLTRDGEGEE 176
Query: 170 --KKKEFTNIHSIEY--------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
++++T + IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 177 EADERQYTEEEAEAEQQRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRD 236
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI E + ++Y++IDTAG+RRR+K E +EKFSVIKTLK++ +ANVV+L++DA++ I+
Sbjct: 237 SIYIPLERDGQEYVIIDTAGVRRRSKVHETVEKFSVIKTLKAVEDANVVLLVVDAREGIA 296
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+ + F GR+L++ VNKWD I + ++ +K+ + ++L F+ FA +FISA+
Sbjct: 297 EQDLGLLGFALNVGRALVIAVNKWDGIDQDVKERVKSELDRRLGFIDFARIHFISALHGT 356
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ ES+ Y+S+ +STS +TR + A +H P R KL+YAH GG NPPI
Sbjct: 357 GVGHLFESVEEAYESATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGYNPPI 416
Query: 400 IVIHGNRLKYIGNDYKRYL 418
+VIHGN++K + + YKR++
Sbjct: 417 VVIHGNQVKKLPDSYKRFM 435
>gi|88703668|ref|ZP_01101384.1| GTP-binding protein engA [Congregibacter litoralis KT71]
gi|88702382|gb|EAQ99485.1| GTP-binding protein engA [Congregibacter litoralis KT71]
Length = 495
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/438 (44%), Positives = 284/438 (64%), Gaps = 22/438 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P + LVGRPNVGKSTLFN+LT SRDALVAN GLTRDR YGEG ++FI+IDTGG
Sbjct: 1 MLPSIALVGRPNVGKSTLFNQLTRSRDALVANLSGLTRDRKYGEGRSDDRAFIVIDTGGV 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+DI++ +VD R GL D+ + +LR+ + LV+NK
Sbjct: 61 SGD-EEGIDAAMAEQSLLAIEEADIVLLLVDARDGLNPVDEQLVQYLRQQSRDFHLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYK------------ 166
+ + +++ DF+ LGI + H I+A +G G++ +E++L TI Y+
Sbjct: 120 IDGRDPDVAVSDFHALGIASMHAIAASHGRGVRQMIESVLETIPRSYEHPEAEGDSEEEG 179
Query: 167 -----KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
+ ++ H +VAIVG+PNVGKSTL+N +LGE RV+ YD PGTTRDS+
Sbjct: 180 GIEGSGAEQGEDEAEDHG--GTRVAIVGRPNVGKSTLVNRILGEERVVVYDQPGTTRDSV 237
Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
F + Y LIDTAG+RRR E IEKFS+IKTL +I +ANVV+LL+D Q+ + Q
Sbjct: 238 YIKFVREGRPYTLIDTAGVRRRKNVREAIEKFSIIKTLSAISDANVVVLLVDGQEGLVDQ 297
Query: 282 DINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNI 341
D+++ E+GR+L++ VNKWD + +Q+++I++ + ++L F+ FA +FISA+ + +
Sbjct: 298 DLHLLGHCLEAGRALVLAVNKWDGLDPDQKEMIRSELDRRLRFVEFADMHFISALHGSGV 357
Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIV 401
+ SI+ Y +++ + TSR+TR L A+ +HPP R KLRYAH GG+NPP +V
Sbjct: 358 GTLFGSIDAAYAAAMQPMGTSRLTRILEEAVADHPPPLVNGRRIKLRYAHAGGRNPPRVV 417
Query: 402 IHGNRLKYIGNDYKRYLE 419
+HGN+ + N Y+RYLE
Sbjct: 418 VHGNQTDKVPNSYQRYLE 435
>gi|407684512|ref|YP_006799686.1| GTP-binding protein Der [Alteromonas macleodii str. 'English
Channel 673']
gi|407246123|gb|AFT75309.1| GTP-binding protein Der [Alteromonas macleodii str. 'English
Channel 673']
Length = 481
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/433 (44%), Positives = 288/433 (66%), Gaps = 19/433 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+ K+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEKRQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+D+++F+VD R G++ D+ I + LR+ + + +V NK
Sbjct: 61 TGD-EEGIDAEMAQQSLLAIEEADVVLFLVDARAGMLPADQGIADHLRRINKKVFVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
+ I+ S S +FY LG+G+ I+A +G G+ L++ L P + F
Sbjct: 120 VDGIDGDSESAEFYSLGLGDIKQIAAAHGRGVSQLLQDALK---PLESNFPDMEIVDEEP 176
Query: 172 ----KEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
T ++ IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDS+
Sbjct: 177 EEEEDAETQRQRLQELPIKLAIVGKPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIPM 236
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E + ++YILIDTAG+R+R K E +EKFS++KTL++I EANVV+L++DA++ I+ QD+++
Sbjct: 237 ERDEREYILIDTAGVRKRKKISEAVEKFSIVKTLQAIEEANVVLLVIDAREGITDQDLSL 296
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F+ SGRSL+V VNKWD + + + IK + ++L F+ FA +FISA+ + + +
Sbjct: 297 LGFVLNSGRSLVVAVNKWDGLSTDVKDDIKREMDRRLGFIDFARIHFISALHGSGVGNLF 356
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
ES+ Y S+ ++T+ +T+ + A +H P + R K++YAH GG NPP+IVIHGN
Sbjct: 357 ESVQEAYMSATKRINTALLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHGN 416
Query: 406 RLKYIGNDYKRYL 418
++ + + YKR+L
Sbjct: 417 QVDDLPSSYKRFL 429
>gi|348028472|ref|YP_004871158.1| GTP-binding protein EngA [Glaciecola nitratireducens FR1064]
gi|347945815|gb|AEP29165.1| GTP-binding protein EngA [Glaciecola nitratireducens FR1064]
Length = 480
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/433 (45%), Positives = 282/433 (65%), Gaps = 19/433 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTN+RDALVA++PGLTRDR YG + FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNTRDALVADFPGLTRDRKYGPAKFENRGFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+D+++F+VD R GL D I LRK + + LV NK
Sbjct: 61 TGD-EEGIDAAMAEQSLLAIDEADVVLFLVDARAGLTPDDIGIAEHLRKQDKAMYLVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH- 178
+ I+ S + DF++LG I+A +G G+ + ++LT P +K F +
Sbjct: 120 VDGIDGDSETADFFKLGFAEVLQIAAAHGRGVSQMMTHVLT---PLEKTFPDMQIVEEER 176
Query: 179 -------------SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
IK+AIVGKPNVGKSTLIN +LGE RV+ YD PGTTRDSI
Sbjct: 177 DEEEDADAKLARLQASPIKLAIVGKPNVGKSTLINRILGEERVVVYDQPGTTRDSIFIPM 236
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
+ ++++YILIDTAG+R+R K E +EKFS++KTL++I E+NVV+L++DA++ ++ QD+++
Sbjct: 237 QRDDREYILIDTAGVRKRKKVSETVEKFSIVKTLQAIEESNVVLLVIDAREGVTDQDLSL 296
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F+ SGRSL++ VNKWD + + ++ IK + ++L F+ FA +FISA+ +
Sbjct: 297 LGFVLNSGRSLVLAVNKWDGLETHIKESIKRELDRRLGFVDFARLHFISALHGTGVGHLF 356
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
ES+ Y S+ + ++TS +T+ + A +H P R K++YAH GG NPP+IVIHGN
Sbjct: 357 ESVQEAYKSATVRITTSVLTQIMEMAQNDHNPPLIHGRRVKMKYAHAGGYNPPVIVIHGN 416
Query: 406 RLKYIGNDYKRYL 418
+LK + + YKRYL
Sbjct: 417 QLKDLPDSYKRYL 429
>gi|304398581|ref|ZP_07380453.1| ribosome-associated GTPase EngA [Pantoea sp. aB]
gi|304353792|gb|EFM18167.1| ribosome-associated GTPase EngA [Pantoea sp. aB]
Length = 496
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 283/447 (63%), Gaps = 33/447 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M +Q+ AI E+D+++F+VD R G++ D+ I LR + LV NK
Sbjct: 61 D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-KKFFKKKEFTNIH 178
++ ++ ++ DFY LG+G H I+A +G G+ + +E L LP+ +K +
Sbjct: 120 TDGMDPDQAIVDFYSLGLGEIHAIAASHGRGVSSLIEEAL---LPWMEKVEAVELTEEEE 176
Query: 179 SIEY---------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
+ Y IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NQAYWAALEADEIAEQEAAEEEENFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDGREYVLIDTAGVRKRAKISDTVEKFSVIKTLQAIEDANVVMLV 296
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA IS QD+++ FI SGRSL++ VNKWD + R +K + +L F+ FA +
Sbjct: 297 IDAHAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARIH 356
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + + + ESI YD S ++TS +TR + A +H P + R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESITEAYDCSTRRVNTSLLTRIMNMAADDHQPPLVRGRRVKLKYAH 416
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++K + + YKRYL
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYL 443
>gi|90410877|ref|ZP_01218891.1| GTP-binding protein EngA [Photobacterium profundum 3TCK]
gi|90328090|gb|EAS44401.1| GTP-binding protein EngA [Photobacterium profundum 3TCK]
Length = 493
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/444 (43%), Positives = 286/444 (64%), Gaps = 30/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR +P LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTVSDEAIAKHLRSREKPTFLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE------ 173
+ I++ S +F++LG+ + ++A + G+ +E L P+ + K +
Sbjct: 120 IDGIDADSACAEFWKLGVDAMYQVAAAHNRGVTALMERALA---PFAESLKDNDEEGLID 176
Query: 174 FTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
T++ IE IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 177 LTSVEDIEKADLTEEDAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 236
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI E + ++Y+LIDTAG+RRR + +EKFSVI+TLK++ +ANVV+L++DA
Sbjct: 237 GTTRDSIYIPMERDGQEYVLIDTAGVRRRKNMNQAVEKFSVIQTLKAVEDANVVLLIIDA 296
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++NIS QD+++ F+ SGRSL++ VNKWD + + ++ +K+ + ++L F+ FA +FIS
Sbjct: 297 RENISDQDLSLLGFVLNSGRSLVLAVNKWDGLDNEVKERVKSELDRRLGFIDFARIHFIS 356
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + +S+ Y S+ +STS +TR + A +H P + R KL+YAH GG
Sbjct: 357 ALHGTGVGHLYDSVIEAYQSATKRISTSLLTRIMQMAQDDHQPPMVRGRRVKLKYAHAGG 416
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPIIVIHGN++ + YKRYL
Sbjct: 417 YNPPIIVIHGNQVNELPASYKRYL 440
>gi|93005486|ref|YP_579923.1| GTP-binding protein EngA [Psychrobacter cryohalolentis K5]
gi|122415786|sp|Q1QD14.1|DER_PSYCK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|92393164|gb|ABE74439.1| Small GTP-binding protein domain protein [Psychrobacter
cryohalolentis K5]
Length = 480
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 282/421 (66%), Gaps = 11/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+KPV+ L+GRPNVGKSTLFN+ T SR ALVA+ GLTRDR YG+ K+FI++DTGG
Sbjct: 3 IKPVVALIGRPNVGKSTLFNQFTKSRQALVADLSGLTRDRQYGDATYEDKAFIVVDTGGI 62
Query: 61 -EPEVKKGIMHE-MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
E + +G + + M++Q+ AI E+DII+F+VD R G++ D I FL G+P+ +V
Sbjct: 63 GEADDGRGDIDDYMSEQSYTAIHEADIIVFVVDARAGMIGADAEIGKFLHTLGKPVYVVA 122
Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
NK + ++ S +FY LG+G P+ ++A +G G+ N LE +LT ++P ++ N+
Sbjct: 123 NKVDGVHDSAPAEFYALGLGEPYPMAASHGRGVGNLLE-VLTADMPSQE--------NVV 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+K+AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI + K Y+LIDTA
Sbjct: 174 EPRGLKLAIIGRPNVGKSTLVNRLLGEDRVVVFDMPGTTRDSIYIPYTREGKDYVLIDTA 233
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFSVIKTL++I ++NV ++++DA + I QD+++ + ++GR+L+V
Sbjct: 234 GVRRRGKIDEKVEKFSVIKTLQAIEDSNVTVIVIDAHEGIVDQDLHMIGYALDAGRALVV 293
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + +Q+ IK + ++ NF+ + + ISA+ + + SI Y SS+
Sbjct: 294 AINKWDGLTADQKNYIKIEMDRRFNFIPYVKVHQISALHGTGVGNLYPSILRAYQSSMFE 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST+R+T+ L A+ +PP R KLRYAH GG NPP+IVIHGN+ + Y+RYL
Sbjct: 354 VSTNRLTQILQDAVTANPPPTVAGRRIKLRYAHIGGHNPPVIVIHGNQTGSLPKSYQRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|254514003|ref|ZP_05126064.1| GTP-binding protein EngA [gamma proteobacterium NOR5-3]
gi|219676246|gb|EED32611.1| GTP-binding protein EngA [gamma proteobacterium NOR5-3]
Length = 474
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 280/421 (66%), Gaps = 9/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P + LVGRPNVGKSTLFN+LT SRDALVAN GLTRDR YGEG ++FI+IDTGG
Sbjct: 1 MLPSIALVGRPNVGKSTLFNQLTRSRDALVANLSGLTRDRKYGEGRSEDRAFIVIDTGGV 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+D+++ +VD + GL D + +LR+ + LV+NK
Sbjct: 61 SGD-EEGIDAAMAEQSLLAIDEADVVLLLVDAKDGLNPVDVQLVQYLRQKSRDFHLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
+ + +++ DF+ LGI + H I+A +G G++ +E +L ++ +P ++E
Sbjct: 120 IDGRDPDVAISDFHSLGIASMHAIAASHGRGVRQMIETVLESVPIPEADDDAQEEQGGT- 178
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+VA+VG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+ F + Y LIDTA
Sbjct: 179 -----RVAVVGRPNVGKSTLVNRILGEDRVVVYDQPGTTRDSVYINFSREGRPYTLIDTA 233
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR E +EKFS+IKTL +I +ANVV+LL+D Q+ + QD+++ E+GR+L++
Sbjct: 234 GVRRRKNVREAVEKFSIIKTLSAISDANVVVLLVDGQEGLVDQDLHLLGNCLEAGRALVL 293
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + +Q+ I++ + ++L F+ FA +FISA+ + + + SI+ Y +++
Sbjct: 294 AVNKWDGLDPDQKDAIRSELDRRLRFVDFADMHFISALHGSGVGTLFGSIDAAYTAAMQP 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ TSR+TR L A+ +HPP R KLRYAH GG+NPP +V+HGN+ + + Y+RYL
Sbjct: 354 MGTSRLTRILEDAVADHPPPLVNGRRIKLRYAHAGGRNPPRVVVHGNQTDKVPSSYQRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|452880499|ref|ZP_21957466.1| GTP-binding protein Der [Pseudomonas aeruginosa VRFPA01]
gi|452183081|gb|EME10099.1| GTP-binding protein Der [Pseudomonas aeruginosa VRFPA01]
Length = 492
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/435 (45%), Positives = 282/435 (64%), Gaps = 17/435 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QAI E+D ++F+VD R G+ D++I LRK + L+ NK
Sbjct: 61 SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKRNKRSFLIANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
+ I+ ++ +F LG+G+ I+A +G GI + L+ L I E ++
Sbjct: 120 VDTIDPDLARAEFSPLGLGDALPIAAAHGRGINHMLQEALGIFPKDNAEEEGEGEPASEE 179
Query: 168 FFKKKEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+ +E T I + IK+AI+G+PNVGKSTL+N +LGE RVI YD GTTRDSI
Sbjct: 180 VAEGEEPTRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
FE N +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ + D+N
Sbjct: 240 FERNEEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLN 299
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ +
Sbjct: 300 LLGFVLETGRALVIALNKWDGMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
+S+ + S++ TSR+T L A++ H P R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQESFRSAVTRWPTSRLTSILEDAVQVHQPPMVNGRRIKLRYAHLGGANPPLIVIHG 419
Query: 405 NRLKYIGNDYKRYLE 419
N++ + Y RYLE
Sbjct: 420 NQVDAVPKAYTRYLE 434
>gi|359393973|ref|ZP_09187026.1| GTPase Der [Halomonas boliviensis LC1]
gi|357971220|gb|EHJ93665.1| GTPase Der [Halomonas boliviensis LC1]
Length = 467
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 276/419 (65%), Gaps = 7/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG G +G K + +IDTGG
Sbjct: 1 MTPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGDKVYTVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + GI M +Q+ AI E+DI++F+VD R GL+ D+ I N LR + + LV+NK
Sbjct: 61 SGD-EDGIDAAMAEQSLAAIDEADIVLFMVDARAGLIAADQAIANHLRVNQKKTWLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + ++ DF+ LG+G+P I+A +G + ++ +L P+ + +
Sbjct: 120 TDGLEEHSAMGDFWSLGLGDPWPIAAAHGRNVSTLIDVVLE---PFPE--RDASIPADTG 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++++++G+PNVGKSTL+N LLGE RV+ +D GTTRD+I+ FE K Y+LIDTAG
Sbjct: 175 SKGVRISVIGRPNVGKSTLVNRLLGEERVVVFDEAGTTRDAIEIPFERRGKPYVLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR EV EKFS+IKTL +I E++VVI++LD + QD+++ +++ +GR+L++
Sbjct: 235 IRRRKNIREVTEKFSIIKTLDAIKESHVVIMVLDGSSGLVEQDLHLLDYVLTTGRALVLA 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + ++ +K++L F +A +FISA+ + SI+ +D++ H
Sbjct: 295 VNKWDGLETEAKDKMRTEVKRRLGFADYAELHFISALHGTAVGDLYPSIDRAFDAANAHW 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST+R+T L A+ +PP R KLR AHQGG NPPIIV+HGN+ + + Y+RYL
Sbjct: 355 STNRLTTLLQDAVSQNPPPMVHGRRIKLRMAHQGGSNPPIIVVHGNQTESLPEAYRRYL 413
>gi|15598994|ref|NP_252488.1| GTP-binding protein EngA [Pseudomonas aeruginosa PAO1]
gi|107103319|ref|ZP_01367237.1| hypothetical protein PaerPA_01004388 [Pseudomonas aeruginosa PACS2]
gi|152985588|ref|YP_001346699.1| GTP-binding protein EngA [Pseudomonas aeruginosa PA7]
gi|254236703|ref|ZP_04930026.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254242490|ref|ZP_04935812.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|313109217|ref|ZP_07795185.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa 39016]
gi|355639724|ref|ZP_09051334.1| GTP-binding protein engA [Pseudomonas sp. 2_1_26]
gi|386057206|ref|YP_005973728.1| GTP-binding protein EngA [Pseudomonas aeruginosa M18]
gi|386067890|ref|YP_005983194.1| GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
gi|392982474|ref|YP_006481061.1| GTP-binding protein Der [Pseudomonas aeruginosa DK2]
gi|416865663|ref|ZP_11915775.1| GTP-binding protein Der [Pseudomonas aeruginosa 138244]
gi|418585962|ref|ZP_13150008.1| GTP-binding protein Der [Pseudomonas aeruginosa MPAO1/P1]
gi|418589839|ref|ZP_13153758.1| GTP-binding protein Der [Pseudomonas aeruginosa MPAO1/P2]
gi|420138001|ref|ZP_14645944.1| GTP-binding protein EngA [Pseudomonas aeruginosa CIG1]
gi|421152389|ref|ZP_15611969.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 14886]
gi|421158391|ref|ZP_15617650.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 25324]
gi|421165950|ref|ZP_15624228.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 700888]
gi|421179031|ref|ZP_15636628.1| GTP-binding protein EngA [Pseudomonas aeruginosa E2]
gi|421518344|ref|ZP_15965018.1| GTP-binding protein Der [Pseudomonas aeruginosa PAO579]
gi|424939334|ref|ZP_18355097.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa NCMG1179]
gi|451985685|ref|ZP_21933898.1| GTP-binding protein EngA [Pseudomonas aeruginosa 18A]
gi|26006739|sp|Q9HXJ8.1|DER_PSEAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225840|sp|A6V0W4.1|DER_PSEA7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|9949972|gb|AAG07186.1|AE004798_9 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126168634|gb|EAZ54145.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126195868|gb|EAZ59931.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|150960746|gb|ABR82771.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|310881687|gb|EFQ40281.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa 39016]
gi|334834347|gb|EGM13318.1| GTP-binding protein Der [Pseudomonas aeruginosa 138244]
gi|346055780|dbj|GAA15663.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa NCMG1179]
gi|347303512|gb|AEO73626.1| GTP-binding protein EngA [Pseudomonas aeruginosa M18]
gi|348036449|dbj|BAK91809.1| GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354831772|gb|EHF15779.1| GTP-binding protein engA [Pseudomonas sp. 2_1_26]
gi|375043636|gb|EHS36252.1| GTP-binding protein Der [Pseudomonas aeruginosa MPAO1/P1]
gi|375051375|gb|EHS43844.1| GTP-binding protein Der [Pseudomonas aeruginosa MPAO1/P2]
gi|392317979|gb|AFM63359.1| GTP-binding protein Der [Pseudomonas aeruginosa DK2]
gi|403249266|gb|EJY62779.1| GTP-binding protein EngA [Pseudomonas aeruginosa CIG1]
gi|404347826|gb|EJZ74175.1| GTP-binding protein Der [Pseudomonas aeruginosa PAO579]
gi|404525149|gb|EKA35425.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 14886]
gi|404539453|gb|EKA48934.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 700888]
gi|404547549|gb|EKA56543.1| GTP-binding protein EngA [Pseudomonas aeruginosa E2]
gi|404549678|gb|EKA58525.1| GTP-binding protein EngA [Pseudomonas aeruginosa ATCC 25324]
gi|451756734|emb|CCQ86421.1| GTP-binding protein EngA [Pseudomonas aeruginosa 18A]
gi|453043521|gb|EME91251.1| GTP-binding protein Der [Pseudomonas aeruginosa PA21_ST175]
Length = 493
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/435 (45%), Positives = 282/435 (64%), Gaps = 17/435 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QAI E+D ++F+VD R G+ D++I LRK + L+ NK
Sbjct: 61 SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKRNKRSFLIANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
+ I+ ++ +F LG+G+ I+A +G GI + L+ L I E ++
Sbjct: 120 VDTIDPDLARAEFSPLGLGDALPIAAAHGRGINHMLQEALGIFPKDNAEEEGEGEPASEE 179
Query: 168 FFKKKEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+ +E T I + IK+AI+G+PNVGKSTL+N +LGE RVI YD GTTRDSI
Sbjct: 180 VAEGEEPTRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
FE N +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ + D+N
Sbjct: 240 FERNEEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLN 299
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ +
Sbjct: 300 LLGFVLETGRALVIALNKWDGMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
+S+ + S++ TSR+T L A++ H P R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQESFRSAVTRWPTSRLTSILEDAVQVHQPPMVNGRRIKLRYAHLGGANPPLIVIHG 419
Query: 405 NRLKYIGNDYKRYLE 419
N++ + Y RYLE
Sbjct: 420 NQVDAVPKAYTRYLE 434
>gi|372276908|ref|ZP_09512944.1| GTP-binding protein Der [Pantoea sp. SL1_M5]
gi|390435951|ref|ZP_10224489.1| GTP-binding protein Der [Pantoea agglomerans IG1]
Length = 496
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 282/447 (63%), Gaps = 33/447 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M +Q+ AI E+D+++F+VD R G++ D+ I LR + LV NK
Sbjct: 61 D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-KKFFKKKEFTNIH 178
++ ++ ++ DFY LG+G H I+A +G G+ + +E L LP+ K +
Sbjct: 120 TDGMDPDQAVVDFYSLGLGEIHAIAASHGRGVSSLIEEAL---LPWMDKVETVELTEEEE 176
Query: 179 SIEY---------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
+ Y IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NQAYWAALEADEIAEQEAAEEEENFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDGREYVLIDTAGVRKRAKISDTVEKFSVIKTLQAIEDANVVMLV 296
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA IS QD+++ FI SGRSL++ VNKWD + R +K + +L F+ FA +
Sbjct: 297 IDAHAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDYRLGFIDFARIH 356
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + + + ESI YD S ++TS +TR + A +H P + R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESITEAYDCSTKRVNTSLLTRIMNMAADDHQPPLVRSRRVKLKYAH 416
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++K + + YKRYL
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYL 443
>gi|120598182|ref|YP_962756.1| GTP-binding protein EngA [Shewanella sp. W3-18-1]
gi|166225859|sp|A1RHQ7.1|DER_SHESW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|120558275|gb|ABM24202.1| small GTP-binding protein [Shewanella sp. W3-18-1]
Length = 488
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/438 (44%), Positives = 280/438 (63%), Gaps = 24/438 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---KKKEFTN 176
+ I++ S +F+ LG+G + ++A G G+ N +E LT PY + ++ E
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT---PYAEAMGIERQGEEEV 176
Query: 177 IHSIEY----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
+ +Y IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS
Sbjct: 177 VDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDS 236
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
I E ++Y++IDTAG+RRR+K +VIEKFSVIKTLK++ +ANVV+L++DA++ ++
Sbjct: 237 IYIPMEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDAREGVAE 296
Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA+
Sbjct: 297 QDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTG 356
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI+
Sbjct: 357 VGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHVGGYNPPIV 416
Query: 401 VIHGNRLKYIGNDYKRYL 418
VIHGN++ + + YKRY+
Sbjct: 417 VIHGNQVSRLPDSYKRYM 434
>gi|160872137|ref|ZP_02062269.1| GTP-binding protein EngA [Rickettsiella grylli]
gi|159120936|gb|EDP46274.1| GTP-binding protein EngA [Rickettsiella grylli]
Length = 455
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/420 (48%), Positives = 279/420 (66%), Gaps = 3/420 (0%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P +VLVGRPNVGKS+LFNRLT +R ALV + PGLTRDR YG G +G + FI+IDTGG
Sbjct: 15 PSIVLVGRPNVGKSSLFNRLTKTRQALVGDIPGLTRDRLYGRGIVGNRPFIVIDTGGLTG 74
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+K I +M +Q + AI E+D ++F+VD R+GL D+ + LR + I LVINKSE
Sbjct: 75 CKEKNIAFQMEQQARNAIKEADHVLFLVDAREGLSLLDQQLIQQLRPFNKKITLVINKSE 134
Query: 123 NINSSI-SLDFYELGI--GNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+++++ +F LG + IISA++G G++ +E + T K + +
Sbjct: 135 GLDAALLQSEFSPLGFRTSSLSIISAIHGYGLQTLMEKVFTHGACIKTLTAEHILSEKAI 194
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAIVGKPNVGKSTL+N +LGE RVI +D PGTTRDSI + EY + YI IDTAG
Sbjct: 195 KPKIKVAIVGKPNVGKSTLLNRILGEERVIVFDQPGTTRDSIANDIEYRGQHYIFIDTAG 254
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR++KT+E I+KFSVIK+L++I ++VV+LL+DAQ+ IS QD+++ FI ESG+++I+
Sbjct: 255 IRRKSKTWEAIDKFSVIKSLQAIEASHVVLLLIDAQEGISEQDLHLLGFILESGKAVIIA 314
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +QR IK ++ ++L F+SFA FISA+ + I Y S+ +L
Sbjct: 315 VNKWDGLSKDQRDQIKKDLDRRLQFISFAQVIFISALHGTGVGHLFTLIRQAYQSATRNL 374
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
STS++TR L A+ H P + KLRYAH GG NPPII+IHG ++ Y+RYLE
Sbjct: 375 STSQLTRLLEQAVNTHQPPLSHGRQVKLRYAHPGGYNPPIILIHGQYASFLPESYRRYLE 434
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 174 FTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
FT + + +VG+PNVGKS+L N L + + D PG TRD + N+ +I
Sbjct: 6 FTGMTISSLPSIVLVGRPNVGKSSLFNRLTKTRQALVGDIPGLTRDRLYGRGIVGNRPFI 65
Query: 234 LIDTAGI---RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
+IDT G+ + +N F++ + + +I EA+ V+ L+DA++ +S D + +
Sbjct: 66 VIDTGGLTGCKEKNIAFQMEQ-----QARNAIKEADHVLFLVDAREGLSLLDQQLIQQLR 120
Query: 291 ESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
+ + + +NK + + ++++ L F + ++ + ISAI + + ME +
Sbjct: 121 PFNKKITLVINKSEGL---DAALLQSEF-SPLGFRTSSL-SIISAIHGYGLQTLMEKV-F 174
Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKN 396
+ + I L+ I +K I+PK++ A G N
Sbjct: 175 THGACIKTLTAEHI-------------LSEKAIKPKIKVAIVGKPN 207
>gi|386287230|ref|ZP_10064405.1| GTP-binding protein Der [gamma proteobacterium BDW918]
gi|385279762|gb|EIF43699.1| GTP-binding protein Der [gamma proteobacterium BDW918]
Length = 469
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/420 (44%), Positives = 277/420 (65%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVAN+PGLTRDR YGE G + +I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDALVANFPGLTRDRKYGEASHGSRRYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ QAI E+D ++ ++D R GL+ D+ + LR +P+ V NK
Sbjct: 61 NGD-EEGIDGPMAQQSMQAIDEADAVLLMLDSRAGLMPADEGLIKHLRSCSKPVFFVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ ++ +FY+ G + + ++A G G++ ++++L KF ++ E
Sbjct: 120 VDGVDAEVAKAEFYKTGAEHIYPLTATQGKGVRALMDDVLA------KFPQEAEDKQASL 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
K+AIVG+PNVGKSTL+N +LGE+RV+ YD PGTTRDS+ +E + Y LIDTAG
Sbjct: 174 ATGKKIAIVGRPNVGKSTLVNRMLGEDRVVVYDQPGTTRDSVYINYEREGEDYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR+R E +EKFS++KTLK+I +A+VVIL++D +++I QD+++ + +SGR+++V
Sbjct: 234 IRKRKHISEAVEKFSIVKTLKAIDDAHVVILVMDGRESIVDQDLHLLGQVVDSGRAVVVA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +Q+ IK+ + ++L F+ FA +FISA+ + ES+ Y+S+ L
Sbjct: 294 INKWDGLTADQKNHIKSELDRRLQFIDFAEIHFISALHGTGVGHLYESVEKAYESATRQL 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T +T L A+ H P R KLRYAH GG+NPPIIVIHGN+ + + Y RYLE
Sbjct: 354 QTRMLTTILEGAVHGHSPPMINGRRIKLRYAHPGGQNPPIIVIHGNQTEKVPGSYTRYLE 413
>gi|54307962|ref|YP_128982.1| GTP-binding protein EngA [Photobacterium profundum SS9]
gi|81828838|sp|Q6LU45.1|DER_PHOPR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|46912388|emb|CAG19180.1| putative GTP-binding protein [Photobacterium profundum SS9]
Length = 493
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/444 (43%), Positives = 287/444 (64%), Gaps = 30/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR +P LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTVSDEAIAKHLRSRDKPTFLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE------ 173
+ I++ S +F++LG+ + ++A + G+ +E L P+ + K +
Sbjct: 120 IDGIDADSACAEFWKLGVDAMYQVAAAHNRGVTALMERALA---PFAESLKGNDEEGLID 176
Query: 174 FTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
+++ IE IK+AI+G+PNVGKSTL N +LGE RV+ YD P
Sbjct: 177 LSSVEDIEKADLTEEDAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMP 236
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI E + ++Y+LIDTAG+RRR +V+EKFSVI+TLK++ +ANVV+L++DA
Sbjct: 237 GTTRDSIYIPMERDGQEYVLIDTAGVRRRKNMNQVVEKFSVIQTLKAVEDANVVLLIIDA 296
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++NIS QD+++ F+ SGRSL++ VNKWD + + ++ +K+ + ++L F+ FA +FIS
Sbjct: 297 RENISDQDLSLLGFVLNSGRSLVLAVNKWDGLDNEVKERVKSELDRRLGFIDFARIHFIS 356
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + +S+ Y S+ +STS +TR + A +H P + R KL+YAH GG
Sbjct: 357 ALHGTGVGHLYDSVIEAYKSATKRISTSLLTRIMQMAQDDHQPPMVRGRRVKLKYAHAGG 416
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPIIVIHGN++ + YKRYL
Sbjct: 417 YNPPIIVIHGNQVNDLPASYKRYL 440
>gi|421505098|ref|ZP_15952038.1| GTP-binding protein Der [Pseudomonas mendocina DLHK]
gi|400344321|gb|EJO92691.1| GTP-binding protein Der [Pseudomonas mendocina DLHK]
Length = 492
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/434 (43%), Positives = 281/434 (64%), Gaps = 16/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+V + GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRSRDAIVGDLSGLTRDRQYGEAKWQGRTYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QAI E+D ++F+VD R G+ D++I LR+ + LV+NK
Sbjct: 61 SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDARAGMTASDQMIGEHLRRRNKRSFLVVNK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI--------------ELPY 165
+N++ ++ +F +G+G P I+ +G GI LE +L I E
Sbjct: 120 VDNLDVDLARAEFSPMGLGEPLAIAGAHGRGITQMLEAVLGIFPKDAGEPEEGAEAEEEV 179
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
++ + K + IK+AI+G+PNVGKSTL+N +LGE RVI +D GTTRDSI F
Sbjct: 180 QEGQEAKRIPGPSEKDGIKLAIIGRPNVGKSTLVNRMLGEERVIVFDQAGTTRDSIYIPF 239
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E +++KY LIDTAG+RRR K FE +EKFSV+KTL++I ++NVV+ ++DA++ + D+N+
Sbjct: 240 ERDDEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDSNVVVFVMDAREGVVDHDLNL 299
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F+ ESGR+L++ +NKWD + Q+ +K ++++L F+ FA +FISA+ +
Sbjct: 300 LGFVLESGRALVIALNKWDGMDQGQKDYVKTELERRLFFVDFADIHFISALHGTGVGHLY 359
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + S++ TSR+T+ L A+ +H P R KLRYAH GG NPP+IVIHGN
Sbjct: 360 KSVQAAFHSAVTRWPTSRLTQILEDAVSDHAPPLVNGRRIKLRYAHLGGANPPLIVIHGN 419
Query: 406 RLKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 420 QVDAVPRAYTRYLE 433
>gi|407793025|ref|ZP_11140060.1| GTP-binding protein Der [Idiomarina xiamenensis 10-D-4]
gi|407215385|gb|EKE85224.1| GTP-binding protein Der [Idiomarina xiamenensis 10-D-4]
Length = 479
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/429 (45%), Positives = 275/429 (64%), Gaps = 12/429 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+ FI+IDTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQANYDGFRFILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ QAI+E+D+++F+VDGR G+ D+ I N LRK + +L+ NK
Sbjct: 61 NGD-EEGIDLRMAEQSLQAIVEADVVLFLVDGRDGVTVADQAIANHLRKQNKNTLLICNK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENIL-TIELPYKKFFKKKEFTNIH 178
+ I+ + DFY L +G I+A +G G++ LE L + Y + E
Sbjct: 120 IDGIDEQAAGADFYSLAMGEVFGIAAAHGRGVQKMLETALRPLAEQYPEVIVNSEEEVSS 179
Query: 179 SIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
+E+ +K+AIVG+PNVGKSTL N +LGE RV+ +D PGTTRDS+ + N
Sbjct: 180 DLEHDQIDYQALPLKLAIVGRPNVGKSTLTNRILGEERVVVFDMPGTTRDSVYIPMQRNE 239
Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
+ YILIDTAG+RRR K E IEKFSVIKTL++I +ANVV+ ++DA++ IS QD+N+ F
Sbjct: 240 RDYILIDTAGVRRRGKIGEAIEKFSVIKTLQAIEDANVVLAVIDARETISDQDLNLIGFA 299
Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
+GRS+++ VNKWD + + + IK + ++L F+ FA +FISA+ + ES+
Sbjct: 300 LNAGRSIVIAVNKWDGLTQDHKDEIKRELDRRLGFVDFARVHFISALHGTGVGHLFESVE 359
Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
Y S+ + TS++TR + A H P R KL+YAH GG NPP ++IHGN++
Sbjct: 360 EAYASATQRVGTSKLTRIMEMAQDEHQPPLVSGRRVKLKYAHAGGYNPPRVIIHGNQVND 419
Query: 410 IGNDYKRYL 418
+ Y+RYL
Sbjct: 420 LPGSYQRYL 428
>gi|440757329|ref|ZP_20936517.1| GTP-binding protein EngA [Pantoea agglomerans 299R]
gi|436428888|gb|ELP26537.1| GTP-binding protein EngA [Pantoea agglomerans 299R]
Length = 524
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 283/447 (63%), Gaps = 33/447 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 29 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 88
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M +Q+ AI E+D+++F+VD R G++ D+ I LR + LV NK
Sbjct: 89 D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 147
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-KKFFKKKEFTNIH 178
++ ++ ++ DFY LG+G H I+A +G G+ + +E L LP+ +K +
Sbjct: 148 TDGMDPDQAIVDFYSLGLGEIHAIAASHGRGVSSLIEEAL---LPWMEKVEAVELTEEEE 204
Query: 179 SIEY---------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
+ Y IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 205 NQAYWAALEADEIAEQEAAEEEENFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 264
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L+
Sbjct: 265 DMPGTTRDSIYIPMERDGREYVLIDTAGVRKRAKISDTVEKFSVIKTLQAIEDANVVMLV 324
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA IS QD+++ FI SGRSL++ VNKWD + R +K + +L F+ FA +
Sbjct: 325 IDAHAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARIH 384
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + + + ESI YD S ++TS +TR + A +H P + R KL+YAH
Sbjct: 385 FISALHGSGVGNLFESITEAYDCSTRRVNTSLLTRIMNMAADDHQPPLVRGRRVKLKYAH 444
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++K + + YKRYL
Sbjct: 445 AGGYNPPIVVIHGNQVKDLPDSYKRYL 471
>gi|269103271|ref|ZP_06155968.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268163169|gb|EEZ41665.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 499
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/447 (44%), Positives = 280/447 (62%), Gaps = 30/447 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEINEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR +P LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLMAIEEADVVLFLVDGRAGLTAADEAIAKHLRSRNKPTFLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL---------------TIELP 164
+ I++ S DF++LG H I+A G+ +E L + E+
Sbjct: 120 IDGIDADSACADFWKLGADEMHQIAASQNRGVTALMERALEPFFENISGSDEELESDEIS 179
Query: 165 YKKFFKKKEFTNIHSIEY-------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
+ E N + E IK+AI+G+PNVGKSTL N +LGE RV+ Y
Sbjct: 180 IEDLNSVAEIENANLSEQDAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVY 239
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAGIRRR E +EKFSVI+TLK++ +ANVV+L+
Sbjct: 240 DMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRKNMHEAVEKFSVIQTLKAVEDANVVLLI 299
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++NIS QD+++ F +GRSL++ VNKWD + ++ ++ +K + ++L F+ FA +
Sbjct: 300 IDARENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNDVKERVKTELDRRLGFVDFARIH 359
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + ES+ Y S+ +STS +TR + A +H P + R KL+YAH
Sbjct: 360 FISALHGTGVGHLYESVVEAYQSATKRISTSMLTRIMQMAQDDHQPPMIRGRRVKLKYAH 419
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPIIV+HGN + + YKRYL
Sbjct: 420 AGGYNPPIIVVHGNLVNELPGSYKRYL 446
>gi|213155967|ref|YP_002318012.1| GTP-binding protein EngA [Acinetobacter baumannii AB0057]
gi|301346486|ref|ZP_07227227.1| GTP-binding protein EngA [Acinetobacter baumannii AB056]
gi|301594209|ref|ZP_07239217.1| GTP-binding protein EngA [Acinetobacter baumannii AB059]
gi|421798754|ref|ZP_16234765.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Canada
BC1]
gi|254783128|sp|B7I5H1.1|DER_ACIB5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|213055127|gb|ACJ40029.1| small GTP-binding protein [Acinetobacter baumannii AB0057]
gi|410411403|gb|EKP63274.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Canada
BC1]
Length = 469
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 292/421 (69%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + GI + M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ I LV NK
Sbjct: 61 -GESECGIDNYMAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L ++P + E H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLQ-DIP------EDENPEEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWARIHLISALHGTGVGELYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A H P + R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILNDATDQHQPPTVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|409394988|ref|ZP_11246114.1| GTP-binding protein Der [Pseudomonas sp. Chol1]
gi|409395953|ref|ZP_11246978.1| GTP-binding protein Der [Pseudomonas sp. Chol1]
gi|409119452|gb|EKM95835.1| GTP-binding protein Der [Pseudomonas sp. Chol1]
gi|409120357|gb|EKM96706.1| GTP-binding protein Der [Pseudomonas sp. Chol1]
Length = 494
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/437 (44%), Positives = 277/437 (63%), Gaps = 20/437 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEAKWQGRTYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QAI E+D ++F+VD R GL D++I LRK + LV NK
Sbjct: 61 SGD-EEGIDAKMAEQSLQAIEEADAVLFMVDSRAGLTAADQMIAEHLRKRNKRSFLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ ++ ++ +F LG+G+ I+A +G GI + L+ L I P
Sbjct: 120 VDTVDPDLARAEFSPLGLGDALPIAAAHGRGISHMLDAALGI-FPKDNAEEGEAVEGEVA 178
Query: 170 -------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIK 222
+ K + IK+AI+G+PNVGKSTL+N +LGE RVI YD GTTRDSI
Sbjct: 179 EEVAEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIY 238
Query: 223 SLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQD 282
FE + +KY LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ + D
Sbjct: 239 IPFERDGEKYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHD 298
Query: 283 INIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNIN 342
+N+ F+ E+GR+L++ +NKWD + ++ +K ++++L F+ FA +FISA +
Sbjct: 299 LNLLGFVLETGRALVIALNKWDGMEPGEKDYVKTELERRLFFVDFADIHFISAKHGTGVG 358
Query: 343 SFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVI 402
+S+ + S++ TSR+T+ L A++ H P R KLRYAH GG NPP+IVI
Sbjct: 359 HLYKSVQASFTSAVTRWPTSRLTQILEDAVREHQPPMAAGRRIKLRYAHLGGANPPLIVI 418
Query: 403 HGNRLKYIGNDYKRYLE 419
HGN++ + Y RYLE
Sbjct: 419 HGNQVDAVPKSYSRYLE 435
>gi|374620259|ref|ZP_09692793.1| ribosome-associated GTPase EngA [gamma proteobacterium HIMB55]
gi|374303486|gb|EHQ57670.1| ribosome-associated GTPase EngA [gamma proteobacterium HIMB55]
Length = 473
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/420 (46%), Positives = 278/420 (66%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN+LT +RDALVA+Y GLTRDR YGEG +G++ F++IDTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNQLTKTRDALVADYSGLTRDRKYGEGKLGEQRFMVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E ++GI M Q+ AI E+D+++ +VDGR GL D+ + LR+ +P LV+NK
Sbjct: 61 TGE-EQGIDAAMAAQSLAAIDEADVVLLMVDGRAGLQVGDQTLVRLLRERNKPFELVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + ++ DF+ LGIG H I+A + G+++ + +L + F + I
Sbjct: 120 IDGVGEDVAASDFHSLGIGALHTIAATHNRGVRSMITEVL-------EPFDSESQPPIEL 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I+VAIVG+PNVGKSTL+N LLGE RV+ +D PGTTRDS+ FE + Y LIDTAG
Sbjct: 173 DSGIRVAIVGRPNVGKSTLVNRLLGEERVVVFDQPGTTRDSVFIEFERHGHAYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR E +EKFS++KTLK+I +ANVVILL+DA++ + QD+++ E+GR L+V
Sbjct: 233 VRRRKNVKETVEKFSIVKTLKAIDQANVVILLMDAREGVVEQDLHLLGQCIEAGRGLVVA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++R+ +K ++++L F+ +A +FISA+ + ESI+ Y+S+ L
Sbjct: 293 LNKWDGMDADERERVKVELQRRLLFVDYADIHFISALHGTGVGHLYESIHGAYESATRKL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T R+T+ L I +HPP R KLRYAH GG NPP IVIHGN + + Y RYLE
Sbjct: 353 TTPRLTKLLEDIIASHPPPMVSGRRVKLRYAHMGGHNPPRIVIHGNSTENLPQSYVRYLE 412
>gi|381403687|ref|ZP_09928371.1| GTP-binding protein Der [Pantoea sp. Sc1]
gi|380736886|gb|EIB97949.1| GTP-binding protein Der [Pantoea sp. Sc1]
Length = 496
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 283/447 (63%), Gaps = 33/447 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M +Q+ AI E+D+++F+VD R G++ D+ I LR + LV NK
Sbjct: 61 D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
++ ++ + +DFY LG+G H I+A +G G+ + +E L LP+
Sbjct: 120 TDGLDPDQAVIDFYSLGLGEIHAIAASHGRGVTSLIETAL---LPWMETVEPVELTEEEE 176
Query: 166 -KKFFKKKEFTNIHSIEY-------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
+ ++ + I E IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NQAYWAALDAEEIAEQEAAEEEENFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + + Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDGRDYVLIDTAGVRKRAKISDTVEKFSVIKTLQAIEDANVVMLV 296
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA IS QD+++ FI SGRSL++ VNKWD + R +K + +L F+ FA +
Sbjct: 297 IDAHAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARIH 356
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + + + ESI YD S ++TS +TR + A +H P + R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESITEAYDCSTRRVNTSLLTRIMNMAADDHQPPLVRGRRVKLKYAH 416
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++K + + YKRYL
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYL 443
>gi|334143339|ref|YP_004536495.1| GTP-binding protein engA [Thioalkalimicrobium cyclicum ALM1]
gi|333964250|gb|AEG31016.1| GTP-binding protein engA [Thioalkalimicrobium cyclicum ALM1]
Length = 475
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/419 (44%), Positives = 276/419 (65%), Gaps = 6/419 (1%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ LVGRPNVGKSTLFNRLT +RDA+VA++PGLTRDR YG G +G +I++DTGG
Sbjct: 3 KPIVALVGRPNVGKSTLFNRLTKTRDAIVADFPGLTRDRQYGTGKVGSYDYIVVDTGGLS 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
E G+ M Q +QA+ ES I F+VDGR G+ D+ I ++R G+P+ +++NK+
Sbjct: 63 GE-DLGVDTLMASQVQQALAESHGIFFLVDGRAGITPADEAIAIYIRGFGKPVQVLVNKT 121
Query: 122 ENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
E N ++ + DFY LG+G+P +S+ +G+ + +++++ LP F + E I
Sbjct: 122 EGCNLAVLTADFYALGLGDPIGVSSAHGDNVAEAVDDLID-RLPTDIFAQDYELDEHPGI 180
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+VA++G+PNVGKSTLIN +LGE+RV+ +D PGTTRDSI FE + + Y LIDTAG+
Sbjct: 181 ---RVAVIGRPNVGKSTLINRMLGEDRVVAFDMPGTTRDSIYVPFERDGQAYTLIDTAGV 237
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR K E IEKFSV+K ++++ +A+VV++L+D + I+ QD+ + ESGR L++ V
Sbjct: 238 RRRKKVSEKIEKFSVLKAIEAMQDAHVVVMLMDGSEGITDQDLTLLGLAIESGRGLVLAV 297
Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD + +QR IK + +L F+S+A + ISA+ + + SI VY ++ +S
Sbjct: 298 NKWDGLDSDQRAKIKYELDLRLQFISYAKTHLISALHGSGVGDLFSSIKKVYRAATNKVS 357
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+ + R L AI +H P R K+RYAH GG NPP ++IHGN++ YKRYLE
Sbjct: 358 TADLNRVLEQAILDHQPPLVGGRRLKMRYAHLGGLNPPRVIIHGNKVDQTPAPYKRYLE 416
>gi|304311812|ref|YP_003811410.1| GTP-binding protein [gamma proteobacterium HdN1]
gi|301797545|emb|CBL45765.1| GTP-binding protein [gamma proteobacterium HdN1]
Length = 474
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/425 (46%), Positives = 277/425 (65%), Gaps = 17/425 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MK + LVGRPNVGKSTLFNRLT +RDA+VA+ PGLTRDR YGE +G +F++IDTGG
Sbjct: 1 MKAAVALVGRPNVGKSTLFNRLTKTRDAIVADMPGLTRDRKYGEARVGAHAFLVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E ++GI M +Q+ AI E+D++ FIVD + GL D+++ LR +P+ +V+NK
Sbjct: 61 TGE-EEGIDSLMAEQSMLAIEEADLVFFIVDAKAGLTAGDEVLAQRLRVREKPLYVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIE-----LPYKKFFKKKEF 174
+ +S +L +F LG+G+P ISA +G G+ ++++ LP E
Sbjct: 120 IDGQDSDEALAEFSRLGLGDPFFISASHGRGVTQMIDDVFGAVGEDAILPE----PTPED 175
Query: 175 TNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYIL 234
T I++A+VG+PNVGKSTLIN +LGE RV+ +D PGTTRDSI +E +KY L
Sbjct: 176 TG------IRIAVVGRPNVGKSTLINRMLGEERVVVFDMPGTTRDSIYIPYERRGQKYTL 229
Query: 235 IDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGR 294
IDTAG+R+R + E +EKFSVIKTL++I +A+VVIL+LDA++ I QD+++ F+ E+GR
Sbjct: 230 IDTAGVRKRGRVDEAVEKFSVIKTLQAIEDAHVVILVLDAREGIVDQDLHLLGFVLETGR 289
Query: 295 SLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
SL++ +NKWD + Q+ +K I +++ F+SFA +FISA+ + S+ Y S
Sbjct: 290 SLLIALNKWDGMDDYQKSRVKVEIDRRMEFVSFAKIHFISALHGTGVGDLYGSVERAYQS 349
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ LST +TR L AI ++ P R KLRYAH GG NPP IVIHGN+ + Y
Sbjct: 350 AFRRLSTPALTRILEDAIADYQPPLVGGRRIKLRYAHMGGVNPPRIVIHGNQTDSVPGSY 409
Query: 415 KRYLE 419
+RYLE
Sbjct: 410 RRYLE 414
>gi|90417497|ref|ZP_01225420.1| hypothetical protein GB2207_07462 [gamma proteobacterium HTCC2207]
gi|90330738|gb|EAS46017.1| hypothetical protein GB2207_07462 [marine gamma proteobacterium
HTCC2207]
Length = 467
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/420 (45%), Positives = 282/420 (67%), Gaps = 9/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVANY GLTRDR YG+G + + F++IDTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTRSRDALVANYSGLTRDRKYGDGEMHDRRFMVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E ++GI M +Q+ A+ E+DI++FIVD R G++ D +I LRK + + LV NK
Sbjct: 61 SGE-EEGIDVGMAEQSLLAMDEADIVLFIVDCRSGIIAADHMIAETLRKKNRKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ + +L DFY+LG +A +G G+++ +E +L PY ++ + +
Sbjct: 120 IDGLDPAAALADFYQLGFSGMFPTTATHGRGVRSMMEELLE---PYPEYAE----PDNSG 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++ +VG+PNVGKSTL+N LLGE+RV+ YD GTTRDS+ +E + KKY LIDTAG
Sbjct: 173 LNGIRIGVVGRPNVGKSTLVNRLLGEDRVVVYDEAGTTRDSVYIDYERHGKKYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR+R IEKFS++KTL++I +ANVV+L++DA + + QD+++ + ++GR L++
Sbjct: 233 IRKRKNIKLAIEKFSIVKTLQAIDDANVVVLMVDAHEGLVEQDLHLMGSVIDAGRGLVIG 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +R+ IK +IK++L F FA ++ISA+ + + +SI + Y ++ L
Sbjct: 293 VNKWDGLEPEKREKIKEDIKRRLRFAEFADVHYISAMHGTGVGNLYDSIENAYRAATDAL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
S SR+T+ L A++ H P R KLR+AH GG+NPP+I++HGN+ + Y RYLE
Sbjct: 353 SASRLTKVLEGAVEEHQPPLVHGRRIKLRFAHAGGRNPPVIIVHGNQTDSVPAQYTRYLE 412
>gi|170725905|ref|YP_001759931.1| GTP-binding protein EngA [Shewanella woodyi ATCC 51908]
gi|238688689|sp|B1KLB1.1|DER_SHEWM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169811252|gb|ACA85836.1| small GTP-binding protein [Shewanella woodyi ATCC 51908]
Length = 488
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/440 (43%), Positives = 281/440 (63%), Gaps = 27/440 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA+YPGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+D+++F+ D R GL D+ I+ LR+ + +V NK
Sbjct: 61 DG-TEEGIETHMAEQSMAAIEEADVVLFLTDARAGLTAADQAISEHLRRREKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I++ S +F+ LG+G + ++A G G+ N +E L PY +
Sbjct: 120 VDGIDADSACAEFWALGLGEVYQMAAAQGRGVTNMIEYALA---PYAEALGLNRDGDDEE 176
Query: 170 -----------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTR 218
+ E T + + IK+A++GKPNVGKSTL N +LGE RV+ YD PGTTR
Sbjct: 177 EKEEREYTEEEAEAEQTRLQDLP-IKLAVIGKPNVGKSTLTNRILGEERVVVYDAPGTTR 235
Query: 219 DSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNI 278
DSI E + ++Y+LIDTAG+RRR+K E +EKFSVIKTLK++ + NVV+L++DA++ I
Sbjct: 236 DSIYIPMERDGREYVLIDTAGVRRRSKVNETVEKFSVIKTLKAVEDCNVVLLIVDAREGI 295
Query: 279 SAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKL 338
+ QD+ + F +GR+L++ VNKWD I + + +K+ + ++L F+ FA +FISA+
Sbjct: 296 AEQDLGLLGFALNAGRALVIAVNKWDGIDQDIKDRVKSELDRRLGFIDFARIHFISALHG 355
Query: 339 NNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPP 398
+ ES+ Y+S+ +STS +TR + A +H P R KL+YAH GG NPP
Sbjct: 356 TGVGHLFESVQEAYESATRRVSTSMLTRIMQMAQDDHQPPMVNGRRVKLKYAHAGGYNPP 415
Query: 399 IIVIHGNRLKYIGNDYKRYL 418
I+V+HGN++K + + YKR++
Sbjct: 416 IVVVHGNQVKKLPDSYKRFM 435
>gi|157374575|ref|YP_001473175.1| GTP-binding protein EngA [Shewanella sediminis HAW-EB3]
gi|189037163|sp|A8FT74.1|DER_SHESH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157316949|gb|ABV36047.1| small GTP-binding protein [Shewanella sediminis HAW-EB3]
Length = 488
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/443 (42%), Positives = 281/443 (63%), Gaps = 33/443 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+D+++F+ D R GL D+ I LR+ + +V NK
Sbjct: 61 DG-TEEGIETHMAEQSLAAIEEADVVLFLTDARAGLTAADQAICEHLRRREKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I++ S +F+ LG+G + ++A G G+ N +E L PY +
Sbjct: 120 VDGIDADSACAEFWALGLGEVYQMAAAQGRGVTNMIEYALA---PYAEALGLNRDGDEDE 176
Query: 170 --------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
++K ++ IK+AI+GKPNVGKSTL N +LGE RV+ YD+PG
Sbjct: 177 DEEEREYSEEEAEAEQKRLQDLP----IKMAIIGKPNVGKSTLTNRILGEERVVVYDSPG 232
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y++IDTAG+RRR+K E +EKFSVIKTLK++ + NVV+L++DA+
Sbjct: 233 TTRDSIYIPMERDGREYVMIDTAGVRRRSKVHETVEKFSVIKTLKAVEDCNVVLLIIDAR 292
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ I+ QD+ + F +GR+L++ VNKWD I + + +K+ + ++L F+ FA +FISA
Sbjct: 293 EGIAEQDLGLLGFALNAGRALVIAVNKWDGIDQDIKDRVKSELDRRLGFIDFARIHFISA 352
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + ES+ YDS+ +STS +TR + A +H P R KL+YAH GG
Sbjct: 353 LHGTGVGHLFESVQEAYDSATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGY 412
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+V+HGN++K + + YKR++
Sbjct: 413 NPPIVVVHGNQVKKLPDSYKRFM 435
>gi|333892275|ref|YP_004466150.1| GTP-binding protein Der [Alteromonas sp. SN2]
gi|332992293|gb|AEF02348.1| GTP-binding protein Der [Alteromonas sp. SN2]
Length = 481
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/434 (44%), Positives = 287/434 (66%), Gaps = 21/434 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTN+RDALVA+YPGLTRDR YG+ ++ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNTRDALVADYPGLTRDRKYGQAKFEQRQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+D+++ +VD R GL+ D+ I + +R+ + + +V NK
Sbjct: 61 TGD-EEGIDAEMAQQSLLAIEEADVVLLLVDARAGLLPADQGIADHIRRLNKKVFVVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I+ S S DFY LG+G I+A +G G+ L++ L +P + F
Sbjct: 120 VDGIDGDSESADFYALGLGTVKQIAAAHGRGVSQLLQDAL---VPLEASFPDMRIVEEVQ 176
Query: 170 -----KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+++ + + IK+AIVGKPNVGKSTL N +LGE RV+ +D PGTTRDS+
Sbjct: 177 EEEIDAEEQLKRLQE-QPIKLAIVGKPNVGKSTLTNRILGEERVVVFDLPGTTRDSVFIP 235
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
E + ++YILIDTAG+R+R K E +EKFS++KTL++I EANVV++++DA++ I+ QD++
Sbjct: 236 MERDEREYILIDTAGVRKRRKVNEAVEKFSIVKTLQAIDEANVVLMIIDAREGITDQDLS 295
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ SGRSL++ VNKWD + + + IK + ++L F+ FA +FISA+ + +
Sbjct: 296 LLGFVLNSGRSLVIAVNKWDGLSTDIKNDIKRELDRRLGFIDFARLHFISAMHGTGVGNL 355
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
ES+ Y S+ ++TS +T+ + A +H P + R K++YAH GG NPP+IVIHG
Sbjct: 356 FESVQEAYLSATKRINTSMLTQIMEMAQDDHQPPLVRGRRVKMKYAHAGGYNPPVIVIHG 415
Query: 405 NRLKYIGNDYKRYL 418
N++ + YKR+L
Sbjct: 416 NQVDDLPTSYKRFL 429
>gi|157961137|ref|YP_001501171.1| GTP-binding protein EngA [Shewanella pealeana ATCC 700345]
gi|189037162|sp|A8H249.1|DER_SHEPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157846137|gb|ABV86636.1| small GTP-binding protein [Shewanella pealeana ATCC 700345]
Length = 490
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/440 (43%), Positives = 277/440 (62%), Gaps = 27/440 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETRMAEQSLAAIEEADVVLFLTDARAGLTAADLAIAQHLRSREKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I++ S +F+ LG+G + ++A G G+ N +E L PY +
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLA---PYAEAMGIVKQEDGDD 176
Query: 170 -----------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTR 218
+ E + + IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTR
Sbjct: 177 DEEEREYTEEQAEAEQKRLQDLP-IKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTR 235
Query: 219 DSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNI 278
DSI E ++Y+LIDTAG+RRR+K E +EKFSVIKTLK++ ++NVV+L++DA++ I
Sbjct: 236 DSIYIPMERQGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDSNVVLLVIDAREGI 295
Query: 279 SAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKL 338
+ QD+ + F+ +GR+L++ +NKWD I N + +K + ++L F+ FA +FISA+
Sbjct: 296 AEQDLGLLGFVLNAGRALVIAINKWDGIDQNIKDRVKTELDRRLGFIDFARIHFISALHG 355
Query: 339 NNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPP 398
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPP
Sbjct: 356 TGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPP 415
Query: 399 IIVIHGNRLKYIGNDYKRYL 418
I+V+HGN++K + + YKRY+
Sbjct: 416 IVVVHGNQVKKLPDSYKRYM 435
>gi|253988871|ref|YP_003040227.1| gtp-binding protein enga (double era-like domain protein)
[Photorhabdus asymbiotica]
gi|253780321|emb|CAQ83482.1| gtp-binding protein enga (double era-like domain protein)
[Photorhabdus asymbiotica]
Length = 499
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/447 (44%), Positives = 284/447 (63%), Gaps = 33/447 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FIIIDTGG
Sbjct: 6 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGQEFIIIDTGGI 65
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M Q+ AI E+DI++F+VD R GL+ D I LR + LV NK
Sbjct: 66 DG-TEDGVETHMAAQSLMAIEEADIVLFMVDARAGLMPADHAIAKHLRSREKATFLVANK 124
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYK------------- 166
++ I+ S+ +FY LG+G+ + I+A +G G+ +E +L LP+
Sbjct: 125 TDGIDIDTSIAEFYSLGLGDIYSIAASHGRGVTQLIERVL---LPFSGKDEEEEVELTEE 181
Query: 167 ----KFFKKKEFTNIH-----------SIEYIKVAIVGKPNVGKSTLINSLLGENRVITY 211
++ ++E S +K+AIVG+PNVGKSTL N +LGE RV+ Y
Sbjct: 182 QANAAYWAEQEQNESEMAEEEEDDFDPSTLPLKLAIVGRPNVGKSTLTNRILGEERVVVY 241
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L+
Sbjct: 242 DMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLV 301
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA++ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +
Sbjct: 302 IDAREGISDQDLSLLGFILNSGRSLVIAVNKWDGMSQEDKEQVKEMLDYRLGFVDFARVH 361
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + + + +SI YD + +STS +TR + A ++H P + R K++YAH
Sbjct: 362 FISALHGSGVGNLFDSILEAYDCATRRVSTSLLTRIMRMAEEDHQPPMIRGRRVKMKYAH 421
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++ + + YKRYL
Sbjct: 422 AGGYNPPIVVIHGNQVTNLSDSYKRYL 448
>gi|88858476|ref|ZP_01133118.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2]
gi|88820093|gb|EAR29906.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2]
Length = 492
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/441 (46%), Positives = 281/441 (63%), Gaps = 24/441 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG+ + FI++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGQAKYDEYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK--SGQPIVLVI 118
+ ++GI EM +Q+ AI E+D+++F+VD R G+ D+ I N LRK + + I LV
Sbjct: 61 DGS-EEGIELEMAEQSLLAIEEADVVMFLVDARAGMTAADQAIANHLRKLNTQKSIFLVA 119
Query: 119 NKSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI-------------ELP 164
NK + +++ S +FY+L +G + I+A +G G+ LE L EL
Sbjct: 120 NKIDGLDADSSCAEFYQLALGEVYQIAASHGRGVTQLLETALQPVIEEFNRLNGVEEELE 179
Query: 165 YKKFFKKKEFTNIHSIEY-------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTT 217
F + E EY IK+AI+G+PNVGKSTL N +LGE RVI YD PGTT
Sbjct: 180 QINEFDEFEEGAEEPDEYQEFSDKPIKLAIIGRPNVGKSTLTNRILGEERVIVYDMPGTT 239
Query: 218 RDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN 277
RDSI N+++Y+LIDTAG+R+R K +V EKFSVIKTLK+I +ANVV+L++DA++
Sbjct: 240 RDSIYIPMTRNDQEYVLIDTAGVRKRKKVSDVAEKFSVIKTLKAIEDANVVLLVVDAREG 299
Query: 278 ISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIK 337
IS QD+++ F SGRSL++ VNKWD + + IK + ++L F+ FA +FISA+
Sbjct: 300 ISDQDLSLLGFALNSGRSLVIAVNKWDGLDEYVKTRIKTELDRRLGFIDFARIHFISALH 359
Query: 338 LNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNP 397
+ ES++ Y S+ +ST+ + R + A +H P R KL+YAH GG NP
Sbjct: 360 GTGVGHLFESVDEAYQSATKRISTAMLRRIMDMAQSDHQPPLVAGRRVKLKYAHAGGYNP 419
Query: 398 PIIVIHGNRLKYIGNDYKRYL 418
PIIVIHGN+L + + YKRYL
Sbjct: 420 PIIVIHGNQLNDLPDSYKRYL 440
>gi|260773381|ref|ZP_05882297.1| GTP-binding protein EngA [Vibrio metschnikovii CIP 69.14]
gi|260612520|gb|EEX37723.1| GTP-binding protein EngA [Vibrio metschnikovii CIP 69.14]
Length = 496
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 291/445 (65%), Gaps = 29/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +G+ FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGENEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR+ + +LV+NK
Sbjct: 61 DG-TEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTSADEAIAQHLRRIEKNAILVVNK 119
Query: 121 SENINSSISL-DFYELGIGNP-HIISALYGNGIKNFLENILTI----------------- 161
+ I++ + +F++LG+G+ + I+A +G G+ ++ L
Sbjct: 120 VDGIDADAACAEFWQLGMGSQMYQIAAAHGRGVAVLIDRALNPLAEQMNEELQNLEDLTE 179
Query: 162 --------ELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
+L Y + + EF + + IK+AI+G+PNVGKSTL N +LGE RV+ YD
Sbjct: 180 FVDTDEPEQLEYTEEEAEAEFKRLQD-QPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM 238
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI + ++++Y+LIDTAG+RRR E +EKFSV+KTLK+I +ANVV+L++D
Sbjct: 239 PGTTRDSIYIPMQRDDREYVLIDTAGVRRRKSINETVEKFSVVKTLKAIEDANVVLLVID 298
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++NIS QD+++ F +GRS+++ +NKWD + ++ ++ +K + ++L F+ FA +FI
Sbjct: 299 ARENISDQDLSLLGFTLNAGRSVVIAINKWDGLSNDIKERVKKELDRRLGFVDFARIHFI 358
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + ES+ Y S+ + TS +TR + A +H P + R KL+YAH G
Sbjct: 359 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPLIRGRRVKLKYAHAG 418
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPIIVIHGN++ + + YKRYL
Sbjct: 419 GYNPPIIVIHGNQVNELPHSYKRYL 443
>gi|308187766|ref|YP_003931897.1| GTP-binding protein engA [Pantoea vagans C9-1]
gi|308058276|gb|ADO10448.1| GTP-binding protein engA [Pantoea vagans C9-1]
Length = 496
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 283/447 (63%), Gaps = 33/447 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M +Q+ AI E+D+++F+VD R G++ D+ I LR + LV NK
Sbjct: 61 D-GTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G H I+A +G G+ + +E L LP+ + + E T
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIHAIAASHGRGVSSLIEEAL---LPWMEEAETVELTEEEE 176
Query: 180 IEY----------------------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
+ IK+AIVG+PNVGKSTL N +LGE+RV+ Y
Sbjct: 177 NQAYWAALEADEIAEQEAAEEEENFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVY 236
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L+
Sbjct: 237 DMPGTTRDSIYIPMERDGREYVLIDTAGVRKRAKISDTVEKFSVIKTLQAIEDANVVMLV 296
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA IS QD+++ FI SGRSL++ VNKWD + R +K + +L F+ FA +
Sbjct: 297 IDAHAGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLGFIDFARIH 356
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + + + ESI YD S ++TS +TR + A +H P + R KL+YAH
Sbjct: 357 FISALHGSGVGNLFESITEAYDCSTRRVNTSLLTRIMNMAADDHQPPLVRGRRVKLKYAH 416
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++K + + YKRYL
Sbjct: 417 AGGYNPPIVVIHGNQVKDLPDSYKRYL 443
>gi|116051824|ref|YP_789333.1| GTP-binding protein EngA [Pseudomonas aeruginosa UCBPP-PA14]
gi|421172949|ref|ZP_15630704.1| GTP-binding protein EngA [Pseudomonas aeruginosa CI27]
gi|122260971|sp|Q02RV3.1|DER_PSEAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|115587045|gb|ABJ13060.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536620|gb|EKA46256.1| GTP-binding protein EngA [Pseudomonas aeruginosa CI27]
Length = 493
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/435 (45%), Positives = 281/435 (64%), Gaps = 17/435 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+VA Y GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTKSRDAIVAEYAGLTRDRQYGEARWQGRTYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ QAI E+D ++F+VD R G+ D++I LRK + L+ NK
Sbjct: 61 SGD-EEGIDAKMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKRNKRSFLIANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
+ I+ ++ +F LG+G+ I+A +G GI + L+ L I E ++
Sbjct: 120 VDTIDPDLARAEFSPLGLGDALPIAAAHGRGINHMLQEALGIFPKDNAEEEGEGEPASEE 179
Query: 168 FFKKKEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSL 224
+ +E T I + IK+AI+G+PNVGKSTL+N +LGE RVI YD GTTRDSI
Sbjct: 180 VAEGEEPTRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIP 239
Query: 225 FEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDIN 284
FE N + Y LIDTAG+RRR K FE +EKFSV+KTL++I +ANVVI ++DA++ + D+N
Sbjct: 240 FERNEEMYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLN 299
Query: 285 IANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSF 344
+ F+ E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ +
Sbjct: 300 LLGFVLETGRALVIALNKWDGMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359
Query: 345 MESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHG 404
+S+ + S++ TSR+T L A++ H P R KLRYAH GG NPP+IVIHG
Sbjct: 360 YKSVQESFRSAVTRWPTSRLTSILEDAVQVHQPPMVNGRRIKLRYAHLGGANPPLIVIHG 419
Query: 405 NRLKYIGNDYKRYLE 419
N++ + Y RYLE
Sbjct: 420 NQVDAVPKAYTRYLE 434
>gi|167623303|ref|YP_001673597.1| GTP-binding protein EngA [Shewanella halifaxensis HAW-EB4]
gi|189037161|sp|B0TLI8.1|DER_SHEHH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|167353325|gb|ABZ75938.1| small GTP-binding protein [Shewanella halifaxensis HAW-EB4]
Length = 490
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/443 (43%), Positives = 278/443 (62%), Gaps = 33/443 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETRMAEQSLAAIEEADVVLFLTDARAGLTAADLAIAQHLRSREKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I++ S +F+ LG+G + ++A G G+ N +E L PY +
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLA---PYAEAMGIVKQEDGDD 176
Query: 170 --------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
++K ++ IK+AI+GKPNVGKSTL N +LGE RV+ YD PG
Sbjct: 177 DEEEREFTEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLTNRILGEERVVVYDEPG 232
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E ++Y+LIDTAG+RRR+K E +EKFSVIKTLK++ ++NVV+L++DA+
Sbjct: 233 TTRDSIYIPMERQGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDSNVVLLVIDAR 292
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ I+ QD+ + F+ +GR+L++ VNKWD I N + +K + ++L F+ FA +FISA
Sbjct: 293 EGIAEQDLGLLGFVLNAGRALVIAVNKWDGIDQNVKDRVKTELDRRLGFIDFARIHFISA 352
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + ESI YDS+ +STS +TR + + +H P R KL+YAH GG
Sbjct: 353 LHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGY 412
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+V+HGN++K + + YKRY+
Sbjct: 413 NPPIVVVHGNQVKKLPDSYKRYM 435
>gi|409425601|ref|ZP_11260185.1| GTP-binding protein Der [Pseudomonas sp. HYS]
Length = 487
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/431 (44%), Positives = 284/431 (65%), Gaps = 14/431 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEARWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VD R GL D++I+ LRK + LV NK
Sbjct: 61 SGD-EQGMDEKMAEQSLLAIEEADVVLFLVDARAGLTAADQMISEHLRKRNKRSFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK--------FFKK 171
+NI+ ++ +F LG+GN ++ G G+ N LE +L+ + P K +
Sbjct: 120 IDNIDPLAAIAEFSPLGMGNAIGVAGAQGRGVNNLLEAVLS-DFPRDKDEEEIDTDVAEG 178
Query: 172 KEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
+E I + IK+AI+G+PNVGKSTL+N +LGE RVI YD PGTTRDSI FE N
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQPGTTRDSIYIPFERN 238
Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
+KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 239 EEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298
Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
E+GR++++ +NKWD + ++R +K ++++L F+ FA +FISA+ + + +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMQPSERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYQSV 358
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ + S++ TSR+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+++
Sbjct: 359 QNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGNQVE 418
Query: 409 YIGNDYKRYLE 419
+ Y RYLE
Sbjct: 419 KVPKSYSRYLE 429
>gi|372268293|ref|ZP_09504341.1| GTP-binding protein Der [Alteromonas sp. S89]
Length = 465
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/420 (46%), Positives = 273/420 (65%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDALVANY GLTRDR YGE I++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTKSRDALVANYAGLTRDRKYGEAEFDGHKMILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+ QAI E+D ++F+VD R GL D++I LR +P +LV NK
Sbjct: 61 SGGEEGIDA-AMAQQSMQAIEEADFVLFMVDCRAGLTPADEMIAERLRTRSKPTILVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +N I+L FYELGIG +A +G G+++ +E ++ +LP E +
Sbjct: 120 VDGVNPDIALAPFYELGIGELFPTTATHGRGVRSLMERLVG-DLP-----DSGEEELVDE 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+ IVG+PNVGKSTL+N LLGE+RV+ +D PGTTRDS+ +E + K Y +IDTAG
Sbjct: 174 ASGIKIGIVGRPNVGKSTLVNRLLGEDRVVVFDQPGTTRDSVYINYERDEKPYTIIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR E +EKFS++KTL+++ +ANVV+L++DA + + QD+++ + +SGR+L+V
Sbjct: 234 IRRRKNVKESVEKFSIVKTLQAVEDANVVVLVIDASEGLVDQDLHLMGTVIQSGRALVVA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + + R +K ++++L F+ FA +FISA+ + + ESI Y S+ L
Sbjct: 294 LNKWDGLDPDHRDFVKTELERRLRFVEFADIHFISALHGTGVGNLYESIEAAYQSATDKL 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+ +TR L A+ H P R KLRYAH GG+NPP+IVIHGN+ + N Y RYLE
Sbjct: 354 STNHLTRILQWAVSEHQPPLVNGHRIKLRYAHAGGQNPPVIVIHGNQTDQVPNHYVRYLE 413
>gi|330446667|ref|ZP_08310319.1| small GTP-binding domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490858|dbj|GAA04816.1| small GTP-binding domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 500
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/448 (43%), Positives = 283/448 (63%), Gaps = 31/448 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR +P LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSRDKPTFLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT----------IELPYKKFF 169
+ I++ S +F+ LG+ + I+A G+ +E L E ++
Sbjct: 120 VDGIDADSACAEFWRLGVDAMYQIAATQNRGVTALMERALAPFSDKLNAELAENGEEQEV 179
Query: 170 KKKEFTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVIT 210
++ T++ IE IK+AI+G+PNVGKSTL N +LGE RV+
Sbjct: 180 SIEDLTSVEDIEKANLSEADAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVV 239
Query: 211 YDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVIL 270
YD PGTTRDSI E + ++Y+LIDTAGIRRR + +EKFSVI+TLK++ +ANVV+L
Sbjct: 240 YDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRKNMHQAVEKFSVIQTLKAVEDANVVLL 299
Query: 271 LLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMF 330
++DA++NIS QD+++ F +GRSL++ VNKWD + + ++ +K+ + ++L F+ FA
Sbjct: 300 VIDARENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARI 359
Query: 331 NFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYA 390
+FISA+ + ES+ Y S+ +STS +TR + A +H P + R KL+YA
Sbjct: 360 HFISALHGTGVGHLYESVIEAYQSATKRISTSLLTRIMQMAQDDHQPPMIRGRRVKLKYA 419
Query: 391 HQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
H GG NPPIIV+HGN++ + YKRYL
Sbjct: 420 HAGGYNPPIIVVHGNQVNELPGSYKRYL 447
>gi|90579361|ref|ZP_01235171.1| GTP-binding protein EngA [Photobacterium angustum S14]
gi|90440194|gb|EAS65375.1| GTP-binding protein EngA [Photobacterium angustum S14]
Length = 500
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/448 (43%), Positives = 283/448 (63%), Gaps = 31/448 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR +P LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSREKPTFLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT----------IELPYKKFF 169
+ I++ S +F+ LG+ + I+A G+ +E L E ++
Sbjct: 120 VDGIDADSACAEFWRLGVDAMYQIAATQNRGVTALMERALAPFSDKLNAELAENGEEQEV 179
Query: 170 KKKEFTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENRVIT 210
++ T++ IE IK+AI+G+PNVGKSTL N +LGE RV+
Sbjct: 180 SIEDLTSVEDIEKANLSEADAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVV 239
Query: 211 YDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVIL 270
YD PGTTRDSI E + ++Y+LIDTAGIRRR + +EKFSVI+TLK++ +ANVV+L
Sbjct: 240 YDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRKNMHQAVEKFSVIQTLKAVEDANVVLL 299
Query: 271 LLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMF 330
++DA++NIS QD+++ F +GRSL++ VNKWD + + ++ +K+ + ++L F+ FA
Sbjct: 300 VIDARENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARI 359
Query: 331 NFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYA 390
+FISA+ + ES+ Y S+ +STS +TR + A +H P + R KL+YA
Sbjct: 360 HFISALHGTGVGHLYESVIEAYQSATKRISTSLLTRIMQMAQDDHQPPMIRGRRVKLKYA 419
Query: 391 HQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
H GG NPPIIV+HGN++ + YKRYL
Sbjct: 420 HAGGYNPPIIVVHGNQVNDLPGSYKRYL 447
>gi|339477885|ref|YP_004706705.1| 50S ribosomal subunit stability factor [Candidatus Moranella
endobia PCIT]
gi|338172436|gb|AEI74837.1| 50S ribosomal subunit stability factor [Candidatus Moranella
endobia PCIT]
Length = 489
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/439 (46%), Positives = 282/439 (64%), Gaps = 24/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT + DALV + PGLTRDR YG K FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTLTCDALVVDCPGLTRDRKYGRAKWKDKEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + KGI + +QT AI E+DI++FIVDGR GL+ D +I LRKS + V++ NK
Sbjct: 61 DDDQIKGIAANIARQTLLAIEEADIVLFIVDGRAGLMAADLVIAKHLRKSQKNTVVIANK 120
Query: 121 SENI--NSSISLDFYELGIGNPHIISALYGNGIKNFLENI--------LTIELPYKKFFK 170
+E I +S++S DFY LG+GN ISA +G GI E I L +E K ++
Sbjct: 121 TEGIAKDSAMS-DFYALGMGNIVPISASHGTGINYLREQIILPLVNACLQVEDAEKWLYE 179
Query: 171 KKEFTNI---------HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
+ + + + IK+AI+G+PNVGKSTLIN L+GE RVI YD PGTTRDSI
Sbjct: 180 EAKTETLAVQENQLFNQQSQPIKLAIIGRPNVGKSTLINRLVGEERVIVYDMPGTTRDSI 239
Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
++ ++Y+LIDTAG+R+R K +EKFSVIKT+++I +ANVV+L+LDA Q IS Q
Sbjct: 240 YVPMVHDGQQYLLIDTAGVRKRRKVTGKVEKFSVIKTIQAIEDANVVLLVLDAHQCISDQ 299
Query: 282 DINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNI 341
D+++ I GRSL++ VNKWD + +R ++K + L F++FA +FISA+ +
Sbjct: 300 DLSLLGLIINKGRSLVIAVNKWDGMSSKKRDVLKETLNNSLGFINFARVHFISALHDRGV 359
Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPP--CRKKLIRPKLRYAHQGGKNPPI 399
+ ES+N Y + +ST+ +TR + A+ H P R + ++PK YAH GG NPPI
Sbjct: 360 GNLFESVNEAYQCATKRVSTAMLTRIMYMAVAEHQPPLVRGRRVKPK--YAHAGGYNPPI 417
Query: 400 IVIHGNRLKYIGNDYKRYL 418
VIHG ++ + + YKRYL
Sbjct: 418 FVIHGTQVTDLTDSYKRYL 436
>gi|442610720|ref|ZP_21025430.1| GTP-binding protein EngA [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747749|emb|CCQ11492.1| GTP-binding protein EngA [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 490
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/439 (44%), Positives = 287/439 (65%), Gaps = 22/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGFEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+DI++F+VD R GL D+ I LRK + +V NK
Sbjct: 61 DGS-EEGIETEMAQQSLLAIEEADIVLFLVDARAGLTSADQGIAQHLRKQQKKSFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENIL-------TIELPYKKFFKKK 172
++ I++ S +FY+L +G+ I+A +G G+ LE+ L E+ ++ + ++
Sbjct: 120 TDGIDADSAVAEFYQLALGDVLQIAAAHGRGVTQLLEHTLRPLLGDLQEEIASEEEYGEE 179
Query: 173 EFT-------------NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
F I++ + +K+AI+G+PNVGKSTL N +LGE RVI YD PGTTRD
Sbjct: 180 AFAAFDEEHVEGEDVEQINADKPVKLAIIGRPNVGKSTLTNRILGEERVIVYDMPGTTRD 239
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI N+++YILIDTAG+R+R K +V+EKFSVIKTL++I +ANV++L++DA++ IS
Sbjct: 240 SIYIPMTRNDREYILIDTAGVRKRKKVSDVVEKFSVIKTLQAIEDANVILLVIDAREGIS 299
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+++ F +GRSL++ VNKWD + ++ IK+ + ++L F+ FA +FISA+
Sbjct: 300 DQDLSLLGFALNAGRSLVIAVNKWDGLDEYVKERIKSELDRRLGFIDFARIHFISALHGT 359
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ ES++ YDS+ +ST+ + R + A +H P + R KL+YAH GG NPP
Sbjct: 360 GVGHLFESVDEAYDSATRRVSTAMLRRIMDMAQADHQPPMVRGRRVKLKYAHAGGYNPPR 419
Query: 400 IVIHGNRLKYIGNDYKRYL 418
VIHGN++ + + YKRYL
Sbjct: 420 FVIHGNQVDDLPDSYKRYL 438
>gi|418020639|ref|ZP_12659877.1| ribosome-associated GTPase EngA [Candidatus Regiella insecticola
R5.15]
gi|347604004|gb|EGY28732.1| ribosome-associated GTPase EngA [Candidatus Regiella insecticola
R5.15]
Length = 479
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/429 (45%), Positives = 279/429 (65%), Gaps = 24/429 (5%)
Query: 13 VGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEM 72
+GKSTLFN LT +R ALV+++PGLTRDR YG FI+IDTGG + ++G+ M
Sbjct: 1 MGKSTLFNHLTRTRSALVSDFPGLTRDRQYGRAEFESHEFIVIDTGGVDG-TEQGVETLM 59
Query: 73 TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINSSISL-D 131
Q AI E+DI++FIVDGR G++ D+ IT LR + L++NK++ I+S ++ D
Sbjct: 60 ASQALLAIEEADIVLFIVDGRAGMLPADQEITQHLRNRQKATFLLVNKTDGIDSDSAIAD 119
Query: 132 FYELGIGNPHIISALYGNGIKNFLENILTIELPYKK-------------FFKKKEFTNIH 178
FY LG+G + I+A +G G+ LE ++ +P K+ + ++E +
Sbjct: 120 FYSLGLGEVYAIAASHGRGVAQLLERVMAPFIPAKEPVVLTDEQLNAAYWATQEEKNDET 179
Query: 179 SIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
+E IK+AIVG+PNVGKSTL N +LGE RVI YD PGTTRDSI N
Sbjct: 180 GLEEDNFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVIVYDLPGTTRDSIYIPMTRNE 239
Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
++YILIDTAG+R+R K E +EKFSVIKTLK+I ++NVV+L++DAQ IS QD+++ FI
Sbjct: 240 RQYILIDTAGVRKRGKVTETVEKFSVIKTLKAIEDSNVVLLVIDAQDGISDQDLSLLGFI 299
Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
SGRSL++ +NKWD + R+ +KN + +LNF+ FA +FISA++ + + + +S+
Sbjct: 300 LNSGRSLVIVINKWDGMQAEDRQRVKNELDLRLNFIDFARIHFISALRGSGVGNLFKSVC 359
Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
YDSS ++TS +TR + A + HPP R + R KL+YAH GG NPPIIVIHGN++
Sbjct: 360 EAYDSSTKRVNTSLLTRIMQMAEEEHPPARIQGRRVKLKYAHAGGYNPPIIVIHGNQVSS 419
Query: 410 IGNDYKRYL 418
+ + YKRYL
Sbjct: 420 LTDAYKRYL 428
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 16/167 (9%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
L +VGRPNVGKSTL NR+ +V + PG TRD Y ++ +I+IDT G
Sbjct: 195 LAIVGRPNVGKSTLTNRILGEERVIVYDLPGTTRDSIYIPMTRNERQYILIDTAGVR--- 251
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
K+G + E + +T +AI +S++++ ++D + G+ +QD + F+ SG+ +V+VIN
Sbjct: 252 KRGKVTETVEKFSVIKTLKAIEDSNVVLLVIDAQDGISDQDLSLLGFILNSGRSLVIVIN 311
Query: 120 KSENINS--------SISLDFYELGIGNPHIISALYGNGIKNFLENI 158
K + + + + L + H ISAL G+G+ N +++
Sbjct: 312 KWDGMQAEDRQRVKNELDLRLNFIDFARIHFISALRGSGVGNLFKSV 358
>gi|262374928|ref|ZP_06068162.1| ribosome-associated GTPase EngA [Acinetobacter lwoffii SH145]
gi|262309941|gb|EEY91070.1| ribosome-associated GTPase EngA [Acinetobacter lwoffii SH145]
gi|407009093|gb|EKE24308.1| hypothetical protein ACD_6C00164G0010 [uncultured bacterium]
Length = 469
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 286/421 (67%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDSY-MAEQSKTAIHEADIIIFVVDARAGLLASDEQIARELRTLGKKVFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L ++P + E H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLA-DVP------EDENPEEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +ANV+++++DA+ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDANVIVVVVDARDGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD++ RK K +++++ +F+ +A + ISA+ + SI+ YDSS +
Sbjct: 293 AVNKWDNMTEYDRKQCKLDVERRFDFIPWAKVHLISALHGTGVGDLYPSIHRAYDSSRLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S ++IT+ L A H P + R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKITQILNDATDAHQPPMVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|294140150|ref|YP_003556128.1| GTP-binding protein EngA [Shewanella violacea DSS12]
gi|293326619|dbj|BAJ01350.1| GTP-binding protein EngA [Shewanella violacea DSS12]
Length = 490
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/439 (44%), Positives = 279/439 (63%), Gaps = 25/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRASLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+D+++F+ D R GL D I + LR+ + +V NK
Sbjct: 61 DG-TEEGIEVHMAEQSLAAIEEADVVLFLTDARAGLTAADHAIADHLRRRDKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF--KKKEFTNI 177
+ I++ S +F+ LG+G + ++A G G+ N +E L PY + + + +I
Sbjct: 120 VDGIDADSACAEFWALGLGEVYQMAASQGRGVTNMIEYALA---PYAEALGLHRNDEGDI 176
Query: 178 HSIEY------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
E IK+AI+GKPNVGKSTLIN +LGE RV+ YD+PGTTRD
Sbjct: 177 EVEEREYSEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLINRILGEERVVVYDSPGTTRD 236
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI E ++Y+LIDTAG+RRR+K E +EKFSVIKTLK+I + NVV+L++DA++ I+
Sbjct: 237 SIYIPMEREGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAIEDCNVVLLIIDAREGIA 296
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA+
Sbjct: 297 EQDLGLLGFALNAGRALVIAVNKWDGINQEIKDRVKSELDRRLGFIDFARIHFISALHGT 356
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ ES+ YDS+ +STS +TR + A +H P R KL+YAH GG NPPI
Sbjct: 357 GVGHLYESVEEAYDSATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGYNPPI 416
Query: 400 IVIHGNRLKYIGNDYKRYL 418
+V+HGN++K + + YKRY+
Sbjct: 417 VVVHGNQVKKLPDSYKRYM 435
>gi|268593180|ref|ZP_06127401.1| ribosome-associated GTPase EngA [Providencia rettgeri DSM 1131]
gi|291311226|gb|EFE51679.1| ribosome-associated GTPase EngA [Providencia rettgeri DSM 1131]
Length = 492
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 283/445 (63%), Gaps = 31/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + FIIIDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M Q+ QAI E+DI++F+VD R GL+ D+ I LR + LV NK
Sbjct: 61 D-GTEEGVETHMAAQSLQAIEEADIVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
++ I+ + ++ DFY LG+G H I+A +G G+ +E L P+
Sbjct: 120 TDGIDVTTAIGDFYSLGLGEIHPIAASHGRGVTQLIEQSLK---PFVAENEEEVELTEEE 176
Query: 166 --KKFFKKKEFTNIHSIEY----------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
++ + E + IK+AIVG+PNVGKSTL N +LGE RV+ +D
Sbjct: 177 ENAAYWAELEAQGELDEDEEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEERVVVFDM 236
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI E + ++YILIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L++D
Sbjct: 237 PGTTRDSIYIPMERDEREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVID 296
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A++ IS QD+++ FI +GRSL++ VNKWD + R+ +K+ ++ +L F+ FA +FI
Sbjct: 297 AREGISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDREHVKDMLELRLGFVDFARIHFI 356
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + + + ES+ Y+S+ + T+ +TR + A H P + R K++YAH G
Sbjct: 357 SALHGSGVGNLFESVQEAYESATRRVGTALLTRIMKMAEDEHQPPLIRGRRVKMKYAHAG 416
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NPPI+VIHGN++ + + YKRYL
Sbjct: 417 GHNPPIVVIHGNQVSDLPDSYKRYL 441
>gi|407803605|ref|ZP_11150439.1| GTP-binding protein [Alcanivorax sp. W11-5]
gi|407022449|gb|EKE34202.1| GTP-binding protein [Alcanivorax sp. W11-5]
Length = 464
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/420 (43%), Positives = 277/420 (65%), Gaps = 6/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPVL LVGRPNVGKSTLFNRLT +RDALVA+ PGLTRDR YG G + +++IDTGG
Sbjct: 1 MKPVLALVGRPNVGKSTLFNRLTRTRDALVADMPGLTRDRKYGLGRGADRPYVVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E +G+ T+Q + A+ E+D ++F+VDGR GL D+ + +R +P+ LV+NK
Sbjct: 61 G-EGLEGVAEPTTEQARLALAEADAVLFLVDGRAGLTVADQQLAQLMRTLNKPVHLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ +FY LG+G H I+A++G G++ LEN+L P +E +
Sbjct: 120 TDGLDEDSAMAEFYALGLGEVHAIAAVHGRGVRRMLENVLA-PFPLPPEVDAEEQA---A 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVA++G+PNVGKSTL+N LLGE RV+ YD GTTRD+I+ +E + K+Y L+DTAG
Sbjct: 176 DSGIKVAVLGRPNVGKSTLVNRLLGEERVVVYDMAGTTRDTIEIPYERHGKRYTLLDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K FE +EKFSVIK +++I +A+VV++++DA++ ++ QD+++ +I E+GRS+++
Sbjct: 236 IRRRGKVFEAVEKFSVIKAMQAIDDAHVVVIVIDAREGLTEQDLHLLGYIIEAGRSVVMA 295
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + R+ +K + ++L F + + ISA+ + I + S+ +
Sbjct: 296 VNKWDGLSVEHREQVKAELGRRLEFAPWMRVHTISALHGTGVGDLYPLIERAWASAFPKV 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+ +T+ + + + H P R KLRYAH GG NPP I+IHG++ + Y+RYLE
Sbjct: 356 STNSLTQMMEAIVARHQPPIVGRNRIKLRYAHIGGSNPPRIIIHGSKADSVPAGYRRYLE 415
>gi|85712733|ref|ZP_01043778.1| GTP-binding protein EngA [Idiomarina baltica OS145]
gi|85693465|gb|EAQ31418.1| GTP-binding protein EngA [Idiomarina baltica OS145]
Length = 479
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/428 (44%), Positives = 284/428 (66%), Gaps = 11/428 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYQFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M KQ+ QAI E+D+++F+VD R G+ D+ I LRK + + LV NK
Sbjct: 61 HGD-EEGIDEVMAKQSLQAIEEADVVLFLVDARDGVTVGDQAIATHLRKQKKKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENI---LTIELPYKKFFKKKEFTN 176
+ I++ ++ DFY L +GN + I+A +G G+++ L++ L + P + + +
Sbjct: 120 IDGIDADSAMADFYSLALGNLYGIAAAHGRGVEHLLDSCFKPLADDYPDVIVPDEPDSED 179
Query: 177 IH--SIEY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
+ I+Y +K+AIVG+PNVGKSTL N +LGE+RV+ +D PGTTRDS+ E + +
Sbjct: 180 LEHDEIDYDALPLKLAIVGRPNVGKSTLTNRILGEDRVVVFDMPGTTRDSVYIPMERDGR 239
Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
+Y+LIDTAG+RRR + E IEK+SV+KTL++I +ANVV+ ++DA++ IS QD+N+ F
Sbjct: 240 EYVLIDTAGVRRRGRIDEAIEKYSVVKTLQAIEDANVVLAVIDARETISDQDLNLIGFAL 299
Query: 291 ESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
+GRS+++ VNKWD + + + IK + ++L F+ FA +FISA+ + ES+
Sbjct: 300 NAGRSIVIAVNKWDGLQQDHKDEIKRELDRRLGFVDFARLHFISALHGTGVGHLFESVEE 359
Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYI 410
Y S+ +STS++T+ + A + H P R KL+YAH GG NPP IVIHGN++ +
Sbjct: 360 AYKSATQRVSTSKLTKIMEMAQEEHQPPLVGGRRVKLKYAHAGGYNPPRIVIHGNQVTRL 419
Query: 411 GNDYKRYL 418
Y+RYL
Sbjct: 420 PGSYQRYL 427
>gi|114562298|ref|YP_749811.1| GTP-binding protein EngA [Shewanella frigidimarina NCIMB 400]
gi|122300418|sp|Q085U2.1|DER_SHEFN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|114333591|gb|ABI70973.1| small GTP-binding protein [Shewanella frigidimarina NCIMB 400]
Length = 488
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/439 (43%), Positives = 278/439 (63%), Gaps = 25/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLAGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+ D R G+ D I LR + +V NK
Sbjct: 61 DGS-EEGIETKMAEQSLAAIEEADVVLFMTDARAGMTAADLAIAQHLRSRDKVTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFK-----KKEF 174
+ I++ S +F+ LG+G + ++A G G+ N ++ LT PY + +E
Sbjct: 120 VDGIDADSACGEFWSLGLGEVYQMAAAQGRGVTNMIDYALT---PYAEAMGIVRELDEEG 176
Query: 175 TNIHSIEY---------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
+ IK+AI+GKPNVGKSTLIN +LGE RV+ YD PGTTRD
Sbjct: 177 EQVEREYTEEEAEAEQERLQNLPIKLAIIGKPNVGKSTLINRILGEERVVVYDEPGTTRD 236
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI ++Y+LIDTAG+RRR+K EVIEKFSVIKTLK++ +ANVV+L++DA++ I+
Sbjct: 237 SIYIPMSREGREYVLIDTAGVRRRSKVNEVIEKFSVIKTLKAVEDANVVLLVIDAREGIA 296
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+ + F +GR+L++ +NKWD I + +K+ + ++L F+ FA +FISA+
Sbjct: 297 EQDLGLLGFTLNAGRALVIAINKWDGIDQKVKDRVKSELDRRLGFIDFARIHFISALHGT 356
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG NPPI
Sbjct: 357 GVGHLYESIEEAYDSATRRVSTSMLTRVMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPI 416
Query: 400 IVIHGNRLKYIGNDYKRYL 418
+VIHGN++K + + YKRY+
Sbjct: 417 VVIHGNQVKKLPDSYKRYM 435
>gi|384082122|ref|ZP_09993297.1| GTP-binding protein Der [gamma proteobacterium HIMB30]
Length = 470
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/420 (44%), Positives = 276/420 (65%), Gaps = 7/420 (1%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
PV+ LVGRPNVGKSTLFNRLT SRDALVA+Y GLTRDR YG + F++IDTGG
Sbjct: 4 PVIALVGRPNVGKSTLFNRLTRSRDALVADYAGLTRDRQYGRAVLSGHPFLLIDTGGLTG 63
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ GI M +Q+K AI E+D ++F+VD G+ D+ + + LR++ +P+ LV NK +
Sbjct: 64 G-EAGIDAAMAEQSKAAIDEADAVVFMVDAASGIAASDQTVADMLRRNDKPVWLVANKID 122
Query: 123 NINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNIHS 179
N+ I+L DFY LG G P I+A +G G+ + +L L + +E +
Sbjct: 123 GQNADIALSDFYSLGFGEPQAIAASHGRGVGVLSDQLLDHFGLLDVEPLDANQERQDAPG 182
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I ++ +VG+PNVGKSTL+N +LGE+RV+ +D PGTTRDSI +E ++ Y LIDTAG
Sbjct: 183 I---RIGVVGRPNVGKSTLVNRMLGEDRVVVFDLPGTTRDSIYIPYERYDETYTLIDTAG 239
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + E +EKFS++KTL++I +++VVIL++DAQ+ + QD+++ + ++GR+L+V
Sbjct: 240 VRRRGRVNETVEKFSIVKTLQAIEDSHVVILVVDAQEGLVEQDLHLMGTVVDAGRALVVA 299
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + R I+ +K++L+F+ +A ++ISA+ + SI Y ++
Sbjct: 300 VNKWDHLDPDLRAKIRETLKRRLSFIPWAKVHYISALHGTGVGDLYGSIKEAYAAATTKF 359
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
ST+ +TR L A+ +H P + R KLRYAHQGG NPP I+IHGN+ K + Y+RYLE
Sbjct: 360 STNVLTRILEDAVADHQPPLVRGRRIKLRYAHQGGMNPPRIIIHGNQTKDVPEAYRRYLE 419
>gi|254786612|ref|YP_003074041.1| GTP-binding protein EngA [Teredinibacter turnerae T7901]
gi|259645886|sp|C5BLV6.1|DER_TERTT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|237684664|gb|ACR11928.1| GTP-binding protein EngA [Teredinibacter turnerae T7901]
Length = 464
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/420 (45%), Positives = 269/420 (64%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P + LVGRPNVGKSTLFNRLT +RDA+VAN+ GLTRDR YG+ K FI++DTGG
Sbjct: 1 MIPTIALVGRPNVGKSTLFNRLTKTRDAIVANFAGLTRDRKYGDAEFEGKRFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ QAI ESDII+F+VD R GL D I LR +P LV NK
Sbjct: 61 SGD-EEGIDSVMAEQSLQAIAESDIILFLVDCRDGLTHVDSQIAQHLRTLHKPTFLVANK 119
Query: 121 SENINSSISLD-FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ N +++ F+ELG+G H ++A +G G+ + +L + E +
Sbjct: 120 VDGQNHDLAIAPFFELGLGEVHSVAAAHGRGVNTLMATVLA------DIAVESEADEADA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+K+AI+G+PNVGKSTL+N +LGE RV+ +D PGTTRDSI +E + K Y LIDTAG
Sbjct: 174 ERRLKMAIIGRPNVGKSTLVNRMLGEERVVVFDMPGTTRDSIYIDYERDEKHYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR +EKFS+IKTL++I +ANVVIL++DA + I QD+++ ESGR+L+V
Sbjct: 234 VRRRKNVKLTVEKFSIIKTLQAINDANVVILVMDASEGIVDQDLHLLGHAIESGRALVVA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + + + +K ++++L+F+ +A +FISA+ + + +S+ Y ++
Sbjct: 294 LNKWDGLEDDHKSYVKTELQRRLSFVDYADLHFISALHGTGVGNLYKSVEKAYQAATEKY 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
STS +TR L A+ H P + R KLRYAH GG NPPIIVIHG + + N Y RYLE
Sbjct: 354 STSFLTRILEDAVTAHQPPLVRGRRIKLRYAHAGGHNPPIIVIHGTQTSEVPNHYTRYLE 413
>gi|290475995|ref|YP_003468891.1| GTP-binding protein, essential for cell growth [Xenorhabdus
bovienii SS-2004]
gi|289175324|emb|CBJ82127.1| GTP-binding protein, essential for cell growth [Xenorhabdus
bovienii SS-2004]
Length = 496
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 286/449 (63%), Gaps = 35/449 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FIIIDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGQEFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M Q+ AI E+DI++F+VD R G++ D I LR + LV NK
Sbjct: 61 D-GTEDGVETHMAAQSLMAIEEADIVLFMVDARSGMMPADHAIAKHLRSREKATFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK---FFKKKEFTN 176
++ I++ ++ +FY LG+G+ + I+A +G G+ +E++L LP+ + + +
Sbjct: 120 TDGIDTDTAIPEFYSLGLGDIYSIAASHGRGVTQLIEHVL---LPFSEKEKTEEVELTEE 176
Query: 177 IHSIEY---------------------------IKVAIVGKPNVGKSTLINSLLGENRVI 209
+ Y +K+AIVG+PNVGKSTL N +LGE RV+
Sbjct: 177 EANAAYWSEIEQAELEAAEEEEKEAVFDPTTLPLKLAIVGRPNVGKSTLTNRILGEERVV 236
Query: 210 TYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVI 269
YD PGTTRDSI E + ++YILIDTAG+R+R K E +EKFSVIKTL++I +ANVV+
Sbjct: 237 VYDMPGTTRDSIYIPMERDGREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVL 296
Query: 270 LLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAM 329
L++DA++ +S QD+++ FI SGRSL++ VNKWD + R +K+ + +L F+ FA
Sbjct: 297 LIVDAREGVSDQDLSLLGFILNSGRSLVIAVNKWDGMSQEDRDHVKDMLDLRLGFVDFAR 356
Query: 330 FNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRY 389
+FISA+ + + + +SI Y+S+ +STS +TR + A ++H P + R K++Y
Sbjct: 357 VHFISALHGSGVGNLFDSILEAYESATHRVSTSMLTRIMHMAEEDHQPPMIRGRRVKMKY 416
Query: 390 AHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
AH GG NPPI+VIHGN++ + + YKRYL
Sbjct: 417 AHAGGYNPPIVVIHGNQVTNLPDSYKRYL 445
>gi|262371080|ref|ZP_06064402.1| GTPase [Acinetobacter johnsonii SH046]
gi|262313966|gb|EEY95011.1| GTPase [Acinetobacter johnsonii SH046]
Length = 469
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 286/421 (67%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVFQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DII+F+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDSY-MAEQSKTAINEADIIVFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L+ +P + E + H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEDVLS-SVP------EDEDADEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI +E + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRQYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL++I +A+V++++LDA++ + QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K ++ ++ +F+ +A + ISA+ + SI+ YDSS +
Sbjct: 293 AINKWDNMSEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGDLYPSIHRAYDSSHLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S ++IT+ L A H P R K+RYAH GG+NPP IV+HGN++ DY+RYL
Sbjct: 353 VSPAKITQILSDATDAHQPPMVGGRRIKMRYAHMGGQNPPTIVVHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|119775495|ref|YP_928235.1| GTP-binding protein EngA [Shewanella amazonensis SB2B]
gi|166225853|sp|A1S859.1|DER_SHEAM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|119767995|gb|ABM00566.1| small GTP-binding protein domain [Shewanella amazonensis SB2B]
Length = 488
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/437 (43%), Positives = 278/437 (63%), Gaps = 21/437 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA+YPGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSRDKITFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLE------------------NILTI 161
+ I++ S +F++LG+G + ++A G G+ +E ++T
Sbjct: 120 VDGIDADSACGEFWQLGLGEVYQMAAAQGRGVTGLVEYALAPFAEAMGLVRDDDGEVVTD 179
Query: 162 ELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSI 221
E Y + + E + + IK+AI+GKPNVGKSTL N +LGE RV+ YD PGTTRDS+
Sbjct: 180 ERNYTEEEAEAEQQRLAE-QPIKLAIIGKPNVGKSTLTNRILGEERVVVYDQPGTTRDSV 238
Query: 222 KSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQ 281
E + + Y+LIDTAG+RRR + EVIEKFSVIKTLK++ ++NVV+L++DA + I+ Q
Sbjct: 239 YIPMERDGRNYVLIDTAGVRRRARVHEVIEKFSVIKTLKAVEDSNVVLLVIDAHEGIAEQ 298
Query: 282 DINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNI 341
D+ + F+ SGR+L++ VNKWD + + + +K + ++L F+ FA +FISA+ +
Sbjct: 299 DLGLLGFVLNSGRALVLAVNKWDGLDQDVKDRVKTELDRRLGFIDFARIHFISALHGTGV 358
Query: 342 NSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIV 401
ESI YDS+ +STS +TR + A +H P R KL+YAH GG NPPI+V
Sbjct: 359 GHLFESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPMVNGRRVKLKYAHVGGYNPPIVV 418
Query: 402 IHGNRLKYIGNDYKRYL 418
+HGN++ + + YKRY+
Sbjct: 419 VHGNQVSRLPDSYKRYM 435
>gi|381159933|ref|ZP_09869165.1| ribosome-associated GTPase EngA [Thiorhodovibrio sp. 970]
gi|380877997|gb|EIC20089.1| ribosome-associated GTPase EngA [Thiorhodovibrio sp. 970]
Length = 469
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/419 (46%), Positives = 281/419 (67%), Gaps = 4/419 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SR ALVA+YPGLTRDR YG G +G + +I++DTGG
Sbjct: 1 MLPVITLVGRPNVGKSTLFNRLTRSRHALVADYPGLTRDRQYGVGQLGPRPYILVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
M +Q + AI E+D ++F+VD R G + D I LR++G+P+ LV+NK
Sbjct: 61 SGSSDPLDML-TERQVRLAIAEADHLLFLVDARDGCLTGDFDIAAELRRTGKPLTLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++S+ L +F+ LG+G+P I+A +G G+ LE+I P + + +
Sbjct: 120 VDRLDASLVLPEFHTLGLGDPLPIAASHGRGLNTLLEHIFDALPPAET--DAEAVGTEEA 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++A+VG+PN GKSTLIN LLGE RV+T DTPGTTRDS+ F+ N + Y LIDTAG
Sbjct: 178 AKGIQIAVVGRPNAGKSTLINRLLGEERVVTSDTPGTTRDSLFIPFQANGRDYTLIDTAG 237
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E+IEK+SVIK +++I NVVIL++DAQ I QD +A+ + +SGR+L+V
Sbjct: 238 MRRRAKVTELIEKYSVIKAMQAIDACNVVILVVDAQVGIGEQDATLASHVIDSGRALVVA 297
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + ++R IK++ ++KL FL FA ISA+ +++ ++++ Y S+I L
Sbjct: 298 INKWDGLSADERAKIKDSYERKLAFLDFAERFQISALHGSSVGLLLDAVEGAYASAIRDL 357
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T +TR L + H P R KLRYAHQGG+NPP+IVIHGN+++ + + Y+RYL
Sbjct: 358 PTPLLTRLLADLVSEHQPPLVHGRRIKLRYAHQGGRNPPVIVIHGNQVEAVPDAYRRYL 416
>gi|226954466|ref|ZP_03824930.1| GTP-binding protein EngA [Acinetobacter sp. ATCC 27244]
gi|294651482|ref|ZP_06728795.1| GTP-binding protein EngA [Acinetobacter haemolyticus ATCC 19194]
gi|226834815|gb|EEH67198.1| GTP-binding protein EngA [Acinetobacter sp. ATCC 27244]
gi|292822632|gb|EFF81522.1| GTP-binding protein EngA [Acinetobacter haemolyticus ATCC 19194]
Length = 469
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DII+F+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDSY-MAEQSKTAIHEADIIVFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L E+P + E H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLA-EVP------EDENPEEHN 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +ANVV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDANVVVIVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+SS +
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESSNLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILNDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|89072706|ref|ZP_01159271.1| GTP-binding protein EngA [Photobacterium sp. SKA34]
gi|89051526|gb|EAR56980.1| GTP-binding protein EngA [Photobacterium sp. SKA34]
Length = 500
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/451 (43%), Positives = 283/451 (62%), Gaps = 37/451 (8%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FI+IDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEEHEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ +M +Q+ AI E+D+++F+VDGR GL D+ I LR +P LV+NK
Sbjct: 61 DG-TEEGVETKMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSREKPTFLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I++ S +F+ LG+ + I+A G+ +E L P+
Sbjct: 120 VDGIDADSACAEFWRLGVDAMYQIAATQNRGVTALMERALA---PFSDKLNAELAEEGEE 176
Query: 170 ---KKKEFTNIHSIEY-------------------IKVAIVGKPNVGKSTLINSLLGENR 207
+ ++ T++ IE IK+AI+G+PNVGKSTL N +LGE R
Sbjct: 177 QELQLEDLTSVEDIEKANLSEADAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEER 236
Query: 208 VITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANV 267
V+ YD PGTTRDSI E + ++Y+LIDTAGIRRR + +EKFSVI+TLK++ +ANV
Sbjct: 237 VVVYDMPGTTRDSIYIPMERDGQEYVLIDTAGIRRRKNMHQAVEKFSVIQTLKAVEDANV 296
Query: 268 VILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSF 327
V+L++DA++NIS QD+++ F +GRSL++ VNKWD + + ++ +K+ + ++L F+ F
Sbjct: 297 VLLIIDARENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDF 356
Query: 328 AMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKL 387
A +FISA+ + ES+ Y S+ +STS +TR + A +H P + R KL
Sbjct: 357 ARIHFISALHGTGVGHLYESVIEAYQSATKRISTSLLTRIMQMAQDDHQPPMIRGRRVKL 416
Query: 388 RYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+YAH GG NPPIIV+HGN++ + YKRYL
Sbjct: 417 KYAHAGGYNPPIIVVHGNQVNDLPGSYKRYL 447
>gi|317490873|ref|ZP_07949309.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium
9_2_54FAA]
gi|365836063|ref|ZP_09377470.1| ribosome biogenesis GTPase Der [Hafnia alvei ATCC 51873]
gi|316920420|gb|EFV41743.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium
9_2_54FAA]
gi|364564874|gb|EHM42617.1| ribosome biogenesis GTPase Der [Hafnia alvei ATCC 51873]
Length = 495
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/444 (44%), Positives = 282/444 (63%), Gaps = 27/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT++RDALVA++PGLTRDR YG + FIIIDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEVSGHEFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+DI++F+VD R GL+ D+ I LR + LV NK
Sbjct: 61 D-GTENGVETHMAEQSLMAIEEADIVLFMVDARAGLMPADEGIAQHLRSREKATFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNI 177
++ I+ +++ DFY LG G + I+A +G G+ +E L + +P + +E N
Sbjct: 120 TDGIDPDVAIGDFYSLGFGEVYPIAASHGRGVAQLIEEALIPFVGVPEPERELTEEEANA 179
Query: 178 HSIEY-----------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
IK+AIVG+PNVGKSTL N +LGE+RV+ YD P
Sbjct: 180 AYWAEQEADEAEELAEEEEDDFNPQDLPIKIAIVGRPNVGKSTLTNRILGEDRVVVYDMP 239
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I ++NV +L++DA
Sbjct: 240 GTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTDTVEKFSVIKTLQAIEDSNVALLVIDA 299
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++ IS QD+++ FI SGRSL++ VNKWD + + + +K + +L F+ FA +FIS
Sbjct: 300 REGISDQDLSLLGFILNSGRSLVIVVNKWDGLSEDVKTQVKEMLDLRLGFVDFARIHFIS 359
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + + + ESI YD + +STS +TR + A ++H P + R KL+YAH GG
Sbjct: 360 ALHGSGVGNLFESIQEAYDCATRRVSTSLLTRIMNMAQEDHQPPLVRGRRVKLKYAHAGG 419
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRYL
Sbjct: 420 YNPPIVVIHGNQVKDLADSYKRYL 443
>gi|424743278|ref|ZP_18171591.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-141]
gi|422943539|gb|EKU38555.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-141]
Length = 469
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/420 (44%), Positives = 289/420 (68%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L +++P + ++ +
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVL-VDVPEDENPEEHDKAT--- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE + ++Y LIDTAG
Sbjct: 176 --GLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFERDGRQYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E+IEKFS++KTL++I +A+V++++LDA++ + QD+++ + E+GR++++
Sbjct: 234 VRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ RK K ++ ++ +F+ +A + ISA+ + +I+ YDSS + +
Sbjct: 294 INKWDNMTEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGDMYPTIHRAYDSSHLKV 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYLE
Sbjct: 354 SPAKLTQILNDATEAHQPPMIGGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413
>gi|183599734|ref|ZP_02961227.1| hypothetical protein PROSTU_03237 [Providencia stuartii ATCC 25827]
gi|386741985|ref|YP_006215164.1| GTP-binding protein Der [Providencia stuartii MRSN 2154]
gi|188021993|gb|EDU60033.1| ribosome biogenesis GTPase Der [Providencia stuartii ATCC 25827]
gi|384478678|gb|AFH92473.1| GTP-binding protein Der [Providencia stuartii MRSN 2154]
Length = 490
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/443 (44%), Positives = 284/443 (64%), Gaps = 29/443 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + FIIIDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M Q+ QAI E+D+++F+VD R GL+ D+ I LR + LV NK
Sbjct: 61 D-GTEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------- 165
++ I++ S+ DFY LG+G H I+A +G G+ +E L P+
Sbjct: 120 TDGIDADSVIGDFYSLGLGEIHPIAASHGRGVTQLIEKSLK---PFIEIEEEVELTEEEE 176
Query: 166 -KKFFKKKEFTNIHSIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
++ +E E IK+AIVG+PNVGKSTL N +LGE RV+ +D PG
Sbjct: 177 NAAYWAAQEAEAEFDEEDEEFDPTTLPIKLAIVGRPNVGKSTLTNRILGEERVVVFDMPG 236
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 237 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITETVEKFSVIKTLQAIEDANVVLLVIDAR 296
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI +GRSL++ VNKWD + R+ +K+ ++ +L F+ FA +FISA
Sbjct: 297 EGISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDREHVKDMLELRLGFVDFARIHFISA 356
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ Y+S+ + T+ +TR + A + H P + R K++YAH GG
Sbjct: 357 LHGSGVGNLFESVEEAYESATRRVGTALLTRIMKMAEEEHQPPLIRGRRVKMKYAHAGGH 416
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++ + + YKRYL
Sbjct: 417 NPPIVVIHGNQVSDLPDSYKRYL 439
>gi|284006778|emb|CBA72042.1| GTP-binding protein [Arsenophonus nasoniae]
Length = 493
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 285/443 (64%), Gaps = 26/443 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ + FIIIDTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGKAEFAGQEFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI + M Q+ AI E+DI+ F+VD R GL+ D I LR + L+ NK
Sbjct: 61 DGS-EEGIENHMASQSLLAIEEADIVFFMVDVRSGLMPADHAIAKHLRSRKKETYLLANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT----------IELPYKK-- 167
++ ++ L DFY LG+ + + I+A +G G+ +E ++ +EL ++
Sbjct: 120 TDGLDIDTVLGDFYALGMRDIYPIAASHGRGVTQLIEKVVAPYSPQTLANDMELSEEEAN 179
Query: 168 ---FFKKKEFTNIHSIEY---------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
+ ++E + S E IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 180 AAYWLAQEEKVALESSEEEAFDPRSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDLPG 239
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + +Y+LIDTAG+R+R K E +EKFSVIKTL+SI +ANVV+L++DA+
Sbjct: 240 TTRDSIYIPMERDGCEYVLIDTAGVRKRGKITETVEKFSVIKTLQSIEDANVVLLVIDAR 299
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
Q IS QD+++ FI +GRSL++ VNKWD + R+ +K+ + +L F+ FA +FISA
Sbjct: 300 QGISDQDLSLLGFILNAGRSLVIAVNKWDGMSQEDRQSVKDMLDLRLGFIDFAKVHFISA 359
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ESI Y+S+ + T+ +TR + A + H P + R K++YAH GG
Sbjct: 360 LHGSGVGNLFESIQEAYESATRRVGTALLTRIMKMAEEEHQPPLIRGRRVKMKYAHAGGY 419
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++ + + YKRYL
Sbjct: 420 NPPIVVIHGNQVADLPDSYKRYL 442
>gi|381197783|ref|ZP_09905122.1| GTP-binding protein Der [Acinetobacter lwoffii WJ10621]
Length = 469
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 285/421 (67%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVFQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DII+F+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDSY-MAEQSKTAINEADIIVFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L+ +P + E + H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEDVLS-SVP------EDEDADEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI +E + + Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRHYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL++I +A+V++++LDA++ + QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K ++ ++ +F+ +A + ISA+ + SI+ YDSS +
Sbjct: 293 AINKWDNMSEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGDLYPSIHRAYDSSHLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S ++IT+ L A H P R K+RYAH GG+NPP IV+HGN++ DY+RYL
Sbjct: 353 VSPAKITQILSDATDAHQPPMVGGRRIKMRYAHMGGQNPPTIVVHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|262280930|ref|ZP_06058713.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257830|gb|EEY76565.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 469
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/420 (44%), Positives = 288/420 (68%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L +++P + ++ +
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVL-VDVPEDENPEEHDKAT--- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE + ++Y LIDTAG
Sbjct: 176 --GLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFERDGRQYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E+IEKFS++KTL++I +A+V++++LDA++ + QD+++ + E+GR++++
Sbjct: 234 VRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ RK K ++ ++ +F+ +A + ISA+ + +I+ YDSS + +
Sbjct: 294 INKWDNMTEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGEMYPTIHRAYDSSHLKV 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
S +++T+ L A H P R K+RYAH GG+NPP IVIHGN++ DY+RYLE
Sbjct: 354 SPAKLTQILNDATDAHQPPMVGGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413
>gi|153001514|ref|YP_001367195.1| GTP-binding protein EngA [Shewanella baltica OS185]
gi|160876250|ref|YP_001555566.1| GTP-binding protein EngA [Shewanella baltica OS195]
gi|217972557|ref|YP_002357308.1| GTP-binding protein EngA [Shewanella baltica OS223]
gi|373950336|ref|ZP_09610297.1| GTP-binding protein engA [Shewanella baltica OS183]
gi|378709450|ref|YP_005274344.1| ribosome-associated GTPase EngA [Shewanella baltica OS678]
gi|386323825|ref|YP_006019942.1| GTP-binding protein engA [Shewanella baltica BA175]
gi|418023996|ref|ZP_12662980.1| GTP-binding protein engA [Shewanella baltica OS625]
gi|166225855|sp|A6WQP3.1|DER_SHEB8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037160|sp|A9KWW9.1|DER_SHEB9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783166|sp|B8E9T1.1|DER_SHEB2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|151366132|gb|ABS09132.1| small GTP-binding protein [Shewanella baltica OS185]
gi|160861772|gb|ABX50306.1| small GTP-binding protein [Shewanella baltica OS195]
gi|217497692|gb|ACK45885.1| small GTP-binding protein [Shewanella baltica OS223]
gi|315268439|gb|ADT95292.1| ribosome-associated GTPase EngA [Shewanella baltica OS678]
gi|333817970|gb|AEG10636.1| GTP-binding protein engA [Shewanella baltica BA175]
gi|353536869|gb|EHC06427.1| GTP-binding protein engA [Shewanella baltica OS625]
gi|373886936|gb|EHQ15828.1| GTP-binding protein engA [Shewanella baltica OS183]
Length = 488
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 279/442 (63%), Gaps = 32/442 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I++ S +F+ LG+G + ++A G G+ N +E LT PY +
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT---PYAEAMGIVRQGEDEV 176
Query: 170 -------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGT 216
++K ++ IK+AI+GKPNVGKSTL N +LGE RV+ +D PGT
Sbjct: 177 TEEREYTEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLTNRILGEERVVVFDEPGT 232
Query: 217 TRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
TRDSI E ++Y++IDTAG+RRR+K +VIEKFSVIKTLK++ +ANVV+L++DA++
Sbjct: 233 TRDSIYIPMEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDARE 292
Query: 277 NISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAI 336
I+ QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA+
Sbjct: 293 GIAEQDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISAL 352
Query: 337 KLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKN 396
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG N
Sbjct: 353 HGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYN 412
Query: 397 PPIIVIHGNRLKYIGNDYKRYL 418
PPI+VIHGN++ + + YKRY+
Sbjct: 413 PPIVVIHGNQVSRLPDSYKRYM 434
>gi|374262919|ref|ZP_09621479.1| GTP-binding protein EngA [Legionella drancourtii LLAP12]
gi|363536735|gb|EHL30169.1| GTP-binding protein EngA [Legionella drancourtii LLAP12]
Length = 468
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/420 (48%), Positives = 287/420 (68%), Gaps = 12/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT ++DALVA++PGLTRDR YG+ +KS+I++DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTKTQDALVADFPGLTRDRQYGQAQHNEKSYIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + M+KQ+ A+ E+DI++F+VDGR GL D+ I N LRK + + LV+NK
Sbjct: 61 GVD-DIAVDSLMSKQSTIALNEADIVLFLVDGRSGLTGVDEKIANNLRKLSKKVHLVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E ++ ++ DF LGI + H IS+ +G+GI + L+ +L F + + +
Sbjct: 120 TEGLDDDVACADFQSLGIADIHSISSSHGSGIYSLLDAVLA------PFLSQPD--EVAE 171
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK+A G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI F + ++YILIDTAG
Sbjct: 172 DDAIKIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSIAIPFVRDEQRYILIDTAG 231
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+++ E IEKFSVIKTL++I E+NV + LLDA + I+ QD+N+ FI ESG++L++
Sbjct: 232 VRRKSRIDEKIEKFSVIKTLQAIKESNVCLQLLDANEGITDQDMNLLGFIIESGKALVIA 291
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + + +IK+ + ++L+F +FA FISA+ + + + + IN Y S+I
Sbjct: 292 VNKWDGLDEEHKDMIKSELSRRLHFANFAKIRFISALHGSGVGTLFKDINEAYASAIQSF 351
Query: 360 STSRITRALIS-AIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST R+TR L + K+ PPC R KLRYAH GG NPP+IVIHGN+L + + YKRYL
Sbjct: 352 STPRLTRLLQDISTKHTPPCVNGR-RIKLRYAHLGGHNPPVIVIHGNQLADLPDSYKRYL 410
>gi|53802988|ref|YP_115285.1| GTPase [Methylococcus capsulatus str. Bath]
gi|81823578|sp|Q603B5.1|DER_METCA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|53756749|gb|AAU91040.1| GTPase family protein [Methylococcus capsulatus str. Bath]
Length = 463
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/419 (45%), Positives = 273/419 (65%), Gaps = 8/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ L+GR NVGKSTLFN LT +RDALVA++PGLTRDR YG G++ + ++DTGG
Sbjct: 1 MLPVVALIGRTNVGKSTLFNYLTRTRDALVADFPGLTRDRQYGRVQRGERDYFVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E +GI + KQ + E+D+I+F+VD G+ D+LI + LR+ +P++LV NK
Sbjct: 61 -IEAAEGIDDQAMKQVDHVLDEADVILFLVDVHAGMTAGDELIADRLRRINKPVLLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + I+ +F+ G+G P +ISA +G G+ LE + + LP + E +
Sbjct: 120 IDGTQALIAGAEFHAFGLGEPLLISAAHGTGVHALLERVEAL-LP-----ESGETGETEA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++A+VG+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE ++Y LIDTAG
Sbjct: 174 EGGIRIAVVGRPNVGKSTLVNRILGEERVVVYDQPGTTRDSIYIPFERRGERYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR + E +EKFSVIK+ ++I +A+VVI L+DA + ++ QD N+ + E GR L++
Sbjct: 234 IRRRARVNEGVEKFSVIKSFQAIEKAHVVIYLVDASEGLTDQDANLLGMVLEIGRGLLIG 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
NKWD + QR+ +K I KL FL FA FISA+ + M+++ +Y S+++ L
Sbjct: 294 FNKWDGLEPEQREKVKRQIDVKLPFLEFAKKYFISALHGTGVGVLMDAVKPIYQSAMLDL 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
S SR+T+ L + HPP + R KL+YAHQGG NPP++VIHGN+ + + Y+RYL
Sbjct: 354 SASRLTQVLQDCLTAHPPPLVRGRRIKLKYAHQGGHNPPVVVIHGNQTEDLPAAYRRYL 412
>gi|126175188|ref|YP_001051337.1| GTP-binding protein EngA [Shewanella baltica OS155]
gi|386341941|ref|YP_006038307.1| ribosome-associated GTPase EngA [Shewanella baltica OS117]
gi|166225854|sp|A3D6V5.1|DER_SHEB5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|125998393|gb|ABN62468.1| small GTP-binding protein [Shewanella baltica OS155]
gi|334864342|gb|AEH14813.1| ribosome-associated GTPase EngA [Shewanella baltica OS117]
Length = 488
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 279/442 (63%), Gaps = 32/442 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSREKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I++ S +F+ LG+G + ++A G G+ N +E LT PY +
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAASQGRGVTNMIEYALT---PYAEAMGIVRQGEDEV 176
Query: 170 -------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGT 216
++K ++ IK+AI+GKPNVGKSTL N +LGE RV+ +D PGT
Sbjct: 177 TEEREYTEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLTNRILGEERVVVFDEPGT 232
Query: 217 TRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
TRDSI E ++Y++IDTAG+RRR+K +VIEKFSVIKTLK++ +ANVV+L++DA++
Sbjct: 233 TRDSIYIPMEREGREYVIIDTAGVRRRSKVHQVIEKFSVIKTLKAVEDANVVLLIIDARE 292
Query: 277 NISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAI 336
I+ QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA+
Sbjct: 293 GIAEQDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISAL 352
Query: 337 KLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKN 396
+ ESI YDS+ +STS +TR + + +H P R KL+YAH GG N
Sbjct: 353 HGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYN 412
Query: 397 PPIIVIHGNRLKYIGNDYKRYL 418
PPI+VIHGN++ + + YKRY+
Sbjct: 413 PPIVVIHGNQVSKLPDSYKRYM 434
>gi|333985589|ref|YP_004514799.1| GTP-binding protein engA [Methylomonas methanica MC09]
gi|333809630|gb|AEG02300.1| GTP-binding protein engA [Methylomonas methanica MC09]
Length = 463
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/419 (45%), Positives = 282/419 (67%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN LT SR+ALVA+YPGLTRDR YG G++ +++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNYLTRSREALVADYPGLTRDRQYGRVKRGERDCLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+++ GI KQ + A+ E+D+ F+VD R G+ D+ I + LRK G+P+VLV+NK
Sbjct: 61 TDDLE-GIDIFAKKQVEIALQEADVAFFMVDARDGINASDEAIADMLRKLGKPVVLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ I+S +++ DFY L +G P I+A +G + L I + P + F++++
Sbjct: 120 IDGIDSNTVTHDFYSLALGEPVPIAASHGRNVHELLGRIDDLIPPMEDEFQEQD------ 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I +AIVG+PNVGKSTL+N LLGE RV+ +D GTTRDSI FE NN+K+ LIDTAG
Sbjct: 174 -PGIAIAIVGRPNVGKSTLVNRLLGEERVVVFDEAGTTRDSIYIPFERNNQKFTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K +EKFS+IK+L++I +A+VVI L+DA++ ++ QD +I + E+GR+LI+
Sbjct: 233 MRRRAKVSLTVEKFSIIKSLQAIEKAHVVIYLIDAREGVTDQDAHILGLVLEAGRALIIG 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + + R +K I+ KL FL FA + ISA+ + + + ++ +YD+++I +
Sbjct: 293 LNKWDGLDADHRAFVKKQIEIKLPFLDFAEKHPISALHGSGVGKLFDVVHSLYDAAMIDM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST +TR L A+ +H P R KL+YAHQGG+NPP++VIHG + + + YKR+L
Sbjct: 353 STPVLTRILSDAVASHQPPLVGGRRIKLKYAHQGGRNPPVVVIHGVQTDSLPDSYKRFL 411
>gi|157371840|ref|YP_001479829.1| GTP-binding protein EngA [Serratia proteamaculans 568]
gi|166920103|sp|A8GHW1.1|DER_SERP5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|157323604|gb|ABV42701.1| small GTP-binding protein [Serratia proteamaculans 568]
Length = 494
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/444 (43%), Positives = 282/444 (63%), Gaps = 27/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT++RDALVA++PGLTRDR YG + FII+DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEVEGNEFIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M Q+ AI E+DI++F+VD R GL+ D I LR + LV NK
Sbjct: 61 D-GTEDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADLGIAQHLRNRQKATFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI---ELPY----------K 166
++ ++ ++ DFY LG+G+ H I+A +G G+ +E++L E P
Sbjct: 120 TDGMDPDMAAADFYSLGLGDVHPIAASHGRGVAQLIEHVLVPFVGEKPEEVELTEEEANA 179
Query: 167 KFFKKKEFTNIHSIEY------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
++ ++E + E IK+AIVG+PNVGKSTL N +LGE+RV+ YD P
Sbjct: 180 AYWAEQEGETLEGAEEEPEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMP 239
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI + ++Y+LIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L++DA
Sbjct: 240 GTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVVDA 299
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++ IS QD+++ FI SGRSL++ VNKWD + R +K + +L F+ FA +FIS
Sbjct: 300 REGISDQDLSLLGFILNSGRSLVIVVNKWDGMSEEDRDHVKEMLDLRLGFVDFARIHFIS 359
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + + + S+ Y+ + ++TS +T+ + A +H P + R KL+YAH GG
Sbjct: 360 ALHGSGVGNLFVSVLEAYECATRRVNTSMLTKIMQMAADDHQPPLVRGRRVKLKYAHAGG 419
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++ + + YKRYL
Sbjct: 420 YNPPIVVIHGNQVTDLSDSYKRYL 443
>gi|336317399|ref|ZP_08572255.1| ribosome-associated GTPase EngA [Rheinheimera sp. A13L]
gi|335878332|gb|EGM76275.1| ribosome-associated GTPase EngA [Rheinheimera sp. A13L]
Length = 490
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/446 (44%), Positives = 288/446 (64%), Gaps = 39/446 (8%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYG----EGYIGKKSFIIID 56
M PV+ LVGR NVGKSTLFNRLT +RDALVA++PGLTRDR YG EGY FI++D
Sbjct: 1 MLPVVALVGRANVGKSTLFNRLTRTRDALVADFPGLTRDRKYGSVKYEGY----EFIVVD 56
Query: 57 TGGFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVL 116
TGG + ++GI EM +Q+ +AI E+DI++F+VD R G D I LR+ + + L
Sbjct: 57 TGGIDGN-EQGIEVEMAEQSLKAIDEADIVLFMVDARAGATVADDAIAQHLRRINKKVFL 115
Query: 117 VINKSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFT 175
V NK++ +++ + + DFY L G + I+A++G G+ + L++ L LP +++
Sbjct: 116 VANKTDGLDADTATADFYSLAQGEVYPIAAVHGRGVLSLLQHAL---LP---MLSEQQQQ 169
Query: 176 NIHSIE-----------------------YIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
I +IE +IK+AIVG+PNVGKSTL N +LGE RV+ +D
Sbjct: 170 RIAAIEKGEELPEDFEEESEEDITQAKDQHIKLAIVGRPNVGKSTLTNRILGEERVVVFD 229
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI ++Y LIDTAG+RRR K +++EKFSVIKTL++I +ANVVIL+L
Sbjct: 230 MPGTTRDSIYIPMTRGEREYTLIDTAGVRRRGKIDDMVEKFSVIKTLQAIEDANVVILVL 289
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA+ IS QD++I F+ +GRSL++ VNKWD + ++ +K + ++L F+ FA +F
Sbjct: 290 DARLGISDQDLSILGFVLNAGRSLVLAVNKWDGLDERVKEDVKRELDRRLGFIDFARLHF 349
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + + + ES+ +DS+ +ST+ +TR + A+++H P K R KL+YAH
Sbjct: 350 ISALHGSGVGNLFESVEEAFDSATRRVSTALLTRIMKMAVEDHQPPMVKGRRVKLKYAHA 409
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPP+IVIHG ++ + + YKRYL
Sbjct: 410 GGYNPPLIVIHGTQVDDLPDSYKRYL 435
>gi|299771613|ref|YP_003733639.1| GTP-binding protein EngA [Acinetobacter oleivorans DR1]
gi|298701701|gb|ADI92266.1| GTP-binding protein EngA [Acinetobacter oleivorans DR1]
Length = 469
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/420 (44%), Positives = 286/420 (68%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ I LV NK
Sbjct: 61 GENEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L +P + ++ +
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLE-NVPEDESEEEHD-----K 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE + ++Y LIDTAG
Sbjct: 174 ATGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFERDGRQYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E+IEKFS++KTL++I +A+VV+++LDA++ + QD+++ + E+GR++++
Sbjct: 234 VRRKGKVEEMIEKFSIVKTLQAIKDAHVVVVVLDAREGVVEQDLHLIGYALEAGRAMMIA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD++ RK K ++ ++ +F+ +A + ISA+ + +I+ YDSS + +
Sbjct: 294 INKWDNMTEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGDMYPTIHRAYDSSHLKV 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
S +++T+ L A H P R K+RYAH GG+NPP IVIHGN++ DY+RYLE
Sbjct: 354 SPAKLTQILNDATDAHQPPMVSGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 413
>gi|37525336|ref|NP_928680.1| GTP-binding protein EngA [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|41017002|sp|Q7N702.1|DER_PHOLL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|36784763|emb|CAE13673.1| GTP-binding protein EngA [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 493
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/446 (44%), Positives = 285/446 (63%), Gaps = 32/446 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + + FIIIDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGQEFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M Q+ AI E+DI++F+VD R GL+ D I LR + LV NK
Sbjct: 61 DG-TEDGVETHMAAQSLLAIEEADIVLFMVDARAGLMPADHAIAKHLRGREKATFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYK------------- 166
++ ++ ++ +FY LG+G+ + I+A +G G+ +E +L LP+
Sbjct: 120 TDGVDIDTAIAEFYSLGLGDIYSIAASHGRGVTQLIERVL---LPFSGKGEEEVVELTEE 176
Query: 167 ----KFFKKKEFTNIH----------SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYD 212
++ ++E I S +K+AIVGKPNVGKSTL N +LGE RV+ YD
Sbjct: 177 EANAAYWAEQEQNEIEMVEEEEDFDPSTLPLKLAIVGKPNVGKSTLTNRILGEERVVVYD 236
Query: 213 TPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLL 272
PGTTRDSI E + ++YILIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L++
Sbjct: 237 MPGTTRDSIYIPMERDGREYILIDTAGVRKRGKITETVEKFSVIKTLQAIEDANVVLLVI 296
Query: 273 DAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNF 332
DA++ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +F
Sbjct: 297 DAREGISDQDLSLLGFILNSGRSLVIAVNKWDGMSQEDKERVKEMLDYRLGFVDFARVHF 356
Query: 333 ISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQ 392
ISA+ + + + +SI YD + ++TS +TR + A ++H P + R K++YAH
Sbjct: 357 ISALHGSGVGNLFDSILEAYDCATRRVNTSLLTRIMHMAEEDHQPPMIRGRRVKMKYAHA 416
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++ + + YKRYL
Sbjct: 417 GGYNPPIVVIHGNQVTDLPDSYKRYL 442
>gi|407715871|ref|YP_006837151.1| GTP-binding factor [Cycloclasticus sp. P1]
gi|407256207|gb|AFT66648.1| GTP-binding factor [Cycloclasticus sp. P1]
Length = 468
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/419 (45%), Positives = 282/419 (67%), Gaps = 8/419 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN LT +RDALVA+YPGLTRDR YG +++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNYLTRTRDALVADYPGLTRDRQYGLVKRADIKSLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
GI +Q ++A+ E+D+++F+VD R G+ D+ I LRK G+ IVLV NK
Sbjct: 61 T-ATADGIDGVAVEQVERALEEADVVLFLVDTRHGIHPIDEEIGQNLRKLGKQIVLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++++ + +F+++G P I+A +G G+ L ++ I LP K + F + +
Sbjct: 120 TDGLDANTHIAEFHKMGFDKPWPIAATHGRGVVELLRHVSNI-LP-----KIESFDDTLA 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E I+VA++G+PNVGKSTLIN LLGE RV+ +D PGTTRDS+ FE + K+Y LIDTAG
Sbjct: 174 GEGIRVAVIGRPNVGKSTLINRLLGEERVVVFDQPGTTRDSVFIPFERDGKQYTLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR+K E +EKFS+++TL++I + +VVI ++DA + ++ QD ++ + ESGR+L++
Sbjct: 234 VRRRSKVSEAVEKFSIVQTLRAIDDTHVVIYMIDASEGVTDQDASLLGMVLESGRALVIG 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +QR+ +K I KL+FL +A FISA+ + + ESI +Y S++I +
Sbjct: 294 LNKWDGLSEDQREKVKRQIDVKLSFLEYAERYFISALHGSGVGKLFESIGALYRSAMIDM 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST R+T L +AIK H P R KL++AHQGG+NPP+I+IHGN+ + YKRYL
Sbjct: 354 STPRLTEILENAIKAHQPPLVGGRRIKLKFAHQGGQNPPVIIIHGNQTVSVPGSYKRYL 412
>gi|358010797|ref|ZP_09142607.1| GTP-binding protein Der [Acinetobacter sp. P8-3-8]
Length = 469
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 285/421 (67%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYENKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ I LV NK
Sbjct: 61 GESEGGIDSY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE +LT ++P + E H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEEVLT-DIP------EDENPEDHD 172
Query: 180 -IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI +E + + Y LIDTA
Sbjct: 173 KATGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRHYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL++I +A+V++++LDA++ + QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K ++ ++ +F+ +A + ISA+ + +I+ YDSS +
Sbjct: 293 AINKWDNMTEYDRKQCKLDVDRRFDFIPWAKVHLISALHGTGVGELYPTIHRAYDSSHLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILNDATEAHQPPMISGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|226741196|sp|B8CKR5.1|DER_SHEPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|212555787|gb|ACJ28241.1| GTP-binding protein EngA [Shewanella piezotolerans WP3]
Length = 490
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/443 (43%), Positives = 276/443 (62%), Gaps = 33/443 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG ++ FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+D+++F+ D R GL D I LR + +V NK
Sbjct: 61 DG-TEEGIETRMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSREKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I++ S +F+ LG+G + ++A G G+ N +E L PY +
Sbjct: 120 VDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLA---PYAEAMGITKDGEGEE 176
Query: 170 --------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
++K ++ IK+AI+GKPNVGKSTL N +LGE RV+ YD PG
Sbjct: 177 SEEEREYTEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLTNRILGEERVVVYDEPG 232
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E ++Y+LIDTAG+RRR+K E +EKFSVIKTLK++ + NVV+L++DA+
Sbjct: 233 TTRDSIYIPMEREGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDCNVVLLIIDAR 292
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ I+ QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA
Sbjct: 293 EGIAEQDLGLLGFALNAGRALVIAVNKWDGIDQEVKDRVKSELDRRLGFIDFARIHFISA 352
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + ESI YDS+ +STS +TR + A +H P R KL+YAH GG
Sbjct: 353 LHGTGVGHLYESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGY 412
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+V+HGN++K + + YKR++
Sbjct: 413 NPPIVVVHGNQVKKLPDSYKRFM 435
>gi|78484970|ref|YP_390895.1| small GTP-binding protein domain-containing protein [Thiomicrospira
crunogena XCL-2]
gi|78363256|gb|ABB41221.1| GTP-binding protein [Thiomicrospira crunogena XCL-2]
Length = 480
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/418 (43%), Positives = 279/418 (66%), Gaps = 5/418 (1%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
K V+ LVGRPNVGKSTLFNRLT SRDA+VA+YPGLTRDR YG G +G +I++DTGG
Sbjct: 3 KTVIALVGRPNVGKSTLFNRLTRSRDAIVADYPGLTRDRQYGTGRVGSTPYIVVDTGGLS 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
E ++G+ M Q + AI E+D ++F+VDGR GL+ D+ I +++R +P+ L++NK+
Sbjct: 63 GE-QEGVDPLMAGQVQSAIGEADAVLFLVDGRAGLIPADESIASYIRHFNKPVYLLVNKA 121
Query: 122 ENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
E I+ DFY++G+G P +IS+ +G+ + +E++L+ + + ++ ++
Sbjct: 122 EGHKKDVIANDFYQMGLGEPFVISSAHGDNVNEMIESVLS---DVAQDVEDEDELDLDKH 178
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+VA++G+PNVGKSTLIN ++GE RV+ +D PGTTRDSI FE + Y LIDTAG+
Sbjct: 179 PGIRVAVIGRPNVGKSTLINRMIGEERVVAFDMPGTTRDSIYVPFERQGELYTLIDTAGV 238
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR E IEKFS++K ++++ +NVV+L++D + I+ QD+ + ESGR L++ +
Sbjct: 239 RRRKNIKEKIEKFSIVKAIEAMESSNVVVLVVDGSEGITDQDLTLLGLALESGRGLVIAI 298
Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD++ +QR IK+ ++ KL+F+ +A + ISA+ + ++IN VY +++ +S
Sbjct: 299 NKWDNLTSDQRAKIKHELEYKLHFVDYAKRHLISALHGTGVGDLFKTINAVYHAAMKQVS 358
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
TS + R L A+ +H P R KLRYAH GG NPP +++HG ++ + Y +YL
Sbjct: 359 TSDLNRVLEQAVLDHQPPLIGGRRVKLRYAHLGGLNPPRVIVHGTQVDKLPQAYSKYL 416
>gi|410621695|ref|ZP_11332541.1| GTP-binding protein [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410158933|dbj|GAC27915.1| GTP-binding protein [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 479
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/432 (44%), Positives = 285/432 (65%), Gaps = 18/432 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLTN+RDALVA++PGLTRDR YG ++FI++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNRLTNTRDALVADFPGLTRDRKYGPAKFENRAFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
++GI M +Q+ AI E+D+++F+VD R GL D + LRK + + LV NK
Sbjct: 61 TGN-EEGIDVAMAEQSLLAIDEADVVLFLVDARAGLTPDDIGLAEHLRKQSKAMYLVANK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ S + DF++LG I+A +G G+ + ++LT P +K F E +
Sbjct: 120 VDGLDGDSETADFFKLGFPEVLQIAAAHGRGVSQLMTHVLT---PLEKIFPDMEIVEVER 176
Query: 180 IEY-------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
E IK+AIVGKPNVGKSTLIN +LGE RV+ +D+PGTTRDSI +
Sbjct: 177 EEEYPDAKLERLQNSPIKLAIVGKPNVGKSTLINRILGEERVVVFDSPGTTRDSIFIPMK 236
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
+ ++YILIDTAG+R+R K E +EKFS++KTL++I E+NVV+L++DA++ ++ QD+++
Sbjct: 237 RDKREYILIDTAGVRKRRKVSETVEKFSIVKTLQAIEESNVVLLVIDAREGVTDQDLSLL 296
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F+ SGRSL++ VNKWD + + ++ IK + ++L F+ FA +FISA+ + E
Sbjct: 297 GFVLNSGRSLVLAVNKWDGLETHVKEEIKRELDRRLGFVDFARLHFISALHGTGVGHLFE 356
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ Y+S+ + ++TS +T+ + A +H P R K++YAH GG NPP+IVIHGN+
Sbjct: 357 SVQEAYNSATVRINTSVLTQIMEMAQDDHQPPLIHGRRVKMKYAHAGGYNPPVIVIHGNQ 416
Query: 407 LKYIGNDYKRYL 418
LK + + YKRYL
Sbjct: 417 LKDLPDSYKRYL 428
>gi|422013656|ref|ZP_16360275.1| GTP-binding protein Der [Providencia burhodogranariea DSM 19968]
gi|414102694|gb|EKT64285.1| GTP-binding protein Der [Providencia burhodogranariea DSM 19968]
Length = 490
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/441 (44%), Positives = 283/441 (64%), Gaps = 24/441 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I FIIIDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGHEFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M Q+ QAI E+D+++F+VD R GL+ D+ I LR + LV NK
Sbjct: 61 DG-TEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ I+++ + DFY LG+G + I+A +G G+ +E+ L + + + ++
Sbjct: 120 TDGIDANTVIGDFYALGLGEIYSIAASHGRGVSQLIEHSLKPFIETEDEEIELTEEEENA 179
Query: 180 IEY----------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTT 217
+ IK+AIVG+PNVGKSTL N +LGE RVI +D PGTT
Sbjct: 180 AYWAAQEAENEFVEEEDDFDPTTLPIKLAIVGRPNVGKSTLTNRILGEERVIVFDMPGTT 239
Query: 218 RDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN 277
RDSI E + ++YILIDTAG+R+R K E +EKFSVIKTLK+I +ANVV+L++DA++
Sbjct: 240 RDSIYIPMERDEREYILIDTAGVRKRGKVTETVEKFSVIKTLKAIEDANVVLLVIDAREG 299
Query: 278 ISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIK 337
IS QD+++ FI +GRSL++ VNKWD + R+ +K+ ++ +L F+ FA +FISA+
Sbjct: 300 ISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDREHVKDMLELRLGFVDFARIHFISALH 359
Query: 338 LNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNP 397
+ + + +S+ Y+S+ + T+ +TR + A H P + R K++YAH GG NP
Sbjct: 360 GSGVGNLFDSVQEAYESATRRVGTAMLTRIMKMAEDEHQPPLIRGRRVKMKYAHAGGHNP 419
Query: 398 PIIVIHGNRLKYIGNDYKRYL 418
PI+VIHGN++ + + YKRYL
Sbjct: 420 PIVVIHGNQVSDLPDSYKRYL 440
>gi|429332410|ref|ZP_19213135.1| GTP-binding protein Der [Pseudomonas putida CSV86]
gi|428762909|gb|EKX85099.1| GTP-binding protein Der [Pseudomonas putida CSV86]
Length = 488
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/431 (44%), Positives = 280/431 (64%), Gaps = 14/431 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGEARWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D ++F+VD R GL D++I LRK + LV NK
Sbjct: 61 TGD-EAGMDEKMAEQSLMAIEEADYVLFLVDARAGLTAADQMIAEHLRKRNKQSFLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK--------FFKK 171
+NI+ + +F +G+GN ++ G GI +E +L ++P + +
Sbjct: 120 IDNIDPDTARAEFAPMGMGNAIPVAGSQGRGINALMETVLG-DVPRDQEEESLDENVAEG 178
Query: 172 KEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
+E T I + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE N
Sbjct: 179 EEATRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERN 238
Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
+KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 239 EEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298
Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
E+GR++++ +NKWD + ++R +K ++++L F+ FA +FISA+ + + +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMQPSERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYQSV 358
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ + S++ TSR+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+++
Sbjct: 359 QNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNGRRIKLRYAHLGGANPPIIVIHGNQVE 418
Query: 409 YIGNDYKRYLE 419
+ Y RYLE
Sbjct: 419 KVPRSYSRYLE 429
>gi|409200949|ref|ZP_11229152.1| GTP-binding protein Der [Pseudoalteromonas flavipulchra JG1]
Length = 489
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/438 (44%), Positives = 283/438 (64%), Gaps = 21/438 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+DI++F+VD R G+ D+ I LRK + +V NK
Sbjct: 61 DGS-EEGIETEMAEQSLLAIEEADIVLFLVDARAGMTVADQAIAQHLRKQQKNCFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT---IELPYKKFFKKKEFTN 176
++ I++ S +FY+L +G+ I+A +G G+ LE L EL + + + +
Sbjct: 120 TDGIDADSNCAEFYQLALGDVQQIAAAHGRGVTQLLELTLQPIIAELTAQDEELEHDDED 179
Query: 177 IHSI----------------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
I + + +K+AI+G+PNVGKSTL N +LGE+RVI YD PGTTRDS
Sbjct: 180 IAELYLEGEEAEDGKTGFEDKPVKLAIIGRPNVGKSTLTNRILGEDRVIVYDMPGTTRDS 239
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
I N+K+Y+LIDTAG+R+R K +V+EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 240 IYIPMTRNDKEYVLIDTAGVRKRKKVSDVVEKFSVIKTLQAIEDANVVLLVVDAREGISD 299
Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
QD+++ F +GRSL++ VNKWD + ++ IK + ++L F+ FA +FISA+
Sbjct: 300 QDLSLLGFALNAGRSLVIAVNKWDGLDDYVKERIKTELDRRLGFVDFARLHFISALHGTG 359
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ESI+ Y+S+ +ST+ + R + A +H P + R KL+YAH GG NPP I
Sbjct: 360 VGHLFESIDEAYESATKRVSTAMLRRIMDMAQADHQPPLVRGRRVKLKYAHAGGYNPPRI 419
Query: 401 VIHGNRLKYIGNDYKRYL 418
VIHGN + + + YKRYL
Sbjct: 420 VIHGNMVHELPDSYKRYL 437
>gi|392543685|ref|ZP_10290822.1| GTP-binding protein Der [Pseudoalteromonas piscicida JCM 20779]
Length = 489
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/438 (44%), Positives = 283/438 (64%), Gaps = 21/438 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYEGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+DI++F+VD R G+ D+ I LRK + +V NK
Sbjct: 61 DGS-EEGIETEMAEQSLLAIEEADIVLFLVDARAGMTVADQAIAQHLRKQQKNCFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT---IELPYKKFFKKKEFTN 176
++ I++ S +FY+L +G+ I+A +G G+ LE L EL + + + +
Sbjct: 120 TDGIDADSNCAEFYQLALGDVQQIAAAHGRGVTQLLELTLQPIIAELTAQDEELENDDED 179
Query: 177 IHSI----------------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDS 220
I + + +K+AI+G+PNVGKSTL N +LGE+RVI YD PGTTRDS
Sbjct: 180 IAELYLEGEEAEDGKTGFEDKPVKLAIIGRPNVGKSTLTNRILGEDRVIVYDMPGTTRDS 239
Query: 221 IKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISA 280
I N+K+Y+LIDTAG+R+R K +V+EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 240 IYIPMTRNDKEYVLIDTAGVRKRKKVSDVVEKFSVIKTLQAIEDANVVLLVVDAREGISD 299
Query: 281 QDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNN 340
QD+++ F +GRSL++ VNKWD + ++ IK + ++L F+ FA +FISA+
Sbjct: 300 QDLSLLGFALNAGRSLVIAVNKWDGLDDYVKERIKTELDRRLGFVDFARLHFISALHGTG 359
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
+ ESI+ Y+S+ +ST+ + R + A +H P + R KL+YAH GG NPP I
Sbjct: 360 VGHLFESIDEAYESATKRVSTAMLRRIMDMAQADHQPPLVRGRRVKLKYAHAGGYNPPRI 419
Query: 401 VIHGNRLKYIGNDYKRYL 418
VIHGN + + + YKRYL
Sbjct: 420 VIHGNMVHELPDSYKRYL 437
>gi|163749553|ref|ZP_02156800.1| GTP-binding protein EngA [Shewanella benthica KT99]
gi|161330663|gb|EDQ01600.1| GTP-binding protein EngA [Shewanella benthica KT99]
Length = 492
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/443 (43%), Positives = 277/443 (62%), Gaps = 33/443 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + FI++DTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRASLSGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+D+++F+ D R GL D I LR+ + +V NK
Sbjct: 61 DG-TEEGIEVHMAQQSLAAIEEADVVLFLTDARAGLTAADHAIAEHLRRRDKTTFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+ I++ S +F+ LG+G + ++A G G+ N +E L PY +
Sbjct: 120 IDGIDADSACAEFWALGLGEVYQMAASQGRGVTNMIEYALA---PYAEALGLHRDGEGDI 176
Query: 170 --------------KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
++K ++ IK+AI+GKPNVGKSTLIN +LGE RV+ YD+PG
Sbjct: 177 EVEEREYSEEEAEAEQKRLQDLP----IKLAIIGKPNVGKSTLINRILGEERVVVYDSPG 232
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI ++Y+LIDTAG+RRR+K E +EKFSVIKTLK++ + NVV+L++DA+
Sbjct: 233 TTRDSIYIPMVREGREYVLIDTAGVRRRSKVNETVEKFSVIKTLKAVEDCNVVLLIIDAR 292
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ I+ QD+ + F +GR+L++ VNKWD I + +K+ + ++L F+ FA +FISA
Sbjct: 293 EGITEQDLGLLGFALNAGRALVIAVNKWDGIDQEIKDRVKSELDRRLGFIDFARIHFISA 352
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + ES+ YDS+ +STS +TR + A +H P R KL+YAH GG
Sbjct: 353 LHGTGVGHLYESVEEAYDSATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGY 412
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++K + + YKRY+
Sbjct: 413 NPPIVVIHGNQVKKLPDSYKRYM 435
>gi|403051777|ref|ZP_10906261.1| GTP-binding protein Der [Acinetobacter bereziniae LMG 1003]
Length = 469
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDSY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++LT ++P + E + H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLT-DIP------EDENEDEHD 172
Query: 180 -IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE + +KY LIDTA
Sbjct: 173 QATGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFSV+KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ YDSS +
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYDSSHLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILNDATDAHQPPMISGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|170723482|ref|YP_001751170.1| GTP-binding protein EngA [Pseudomonas putida W619]
gi|229784138|sp|B1JDV4.1|DER_PSEPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169761485|gb|ACA74801.1| small GTP-binding protein [Pseudomonas putida W619]
Length = 487
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/430 (43%), Positives = 278/430 (64%), Gaps = 12/430 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YG+ +SFI+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D ++F+VD R G+ D++I LRK + +LV NK
Sbjct: 61 TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKSAILVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENIL-------TIELPYKKFFKKK 172
+NI++ ++ +F LG+GN ++ G GI +E++L E ++ + +
Sbjct: 120 IDNIDADVARAEFSPLGMGNAIPVAGSQGRGINQLMESVLGHIPRDAEEEALDQEVAEGE 179
Query: 173 EFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
E I + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE +N
Sbjct: 180 EAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERDN 239
Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
+KY IDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 240 EKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299
Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
E+GR++++ +NKWD + +R +K ++++L F+ FA +FISA+ + +S+
Sbjct: 300 LEAGRAIVIALNKWDGMESGERDYVKTELERRLFFVDFADIHFISALHGTGVGHLYKSVQ 359
Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
+ S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+ +
Sbjct: 360 AAFKSAVTRWPTSRLTQILEDAVSEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTEK 419
Query: 410 IGNDYKRYLE 419
I Y RYLE
Sbjct: 420 IPKSYSRYLE 429
>gi|445414091|ref|ZP_21433816.1| ribosome-associated GTPase EngA [Acinetobacter sp. WC-743]
gi|444764910|gb|ELW89215.1| ribosome-associated GTPase EngA [Acinetobacter sp. WC-743]
Length = 469
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/421 (45%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDSY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++LT ++P + E + H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLT-DIP------EDENEDEHD 172
Query: 180 -IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE + +KY LIDTA
Sbjct: 173 KATGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFSV+KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ YDSS +
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYDSSHLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILNDATDAHQPPMISGKRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|388543578|ref|ZP_10146868.1| GTP-binding protein Der [Pseudomonas sp. M47T1]
gi|388278135|gb|EIK97707.1| GTP-binding protein Der [Pseudomonas sp. M47T1]
Length = 487
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/431 (44%), Positives = 279/431 (64%), Gaps = 14/431 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT SRDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKSRDAIVGDLSGLTRDRQYGEARWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +LV NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGFTAADQMIAEHLRKRNKRSILVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------YKKFFKK 171
+NI+ ++ +F LG+G+ ++ G G+ LE L E P +
Sbjct: 120 IDNIDPEMARAEFAPLGMGHAIGVAGAQGRGVNTLLEAALG-EFPRDVEEEDLAAGVAEG 178
Query: 172 KEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
+E I + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE N
Sbjct: 179 EEQVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFERN 238
Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
++KY IDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 239 DEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298
Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
ESGR++++ +NKWD + ++R +K ++++L F+ FA +FISA+ + + S+
Sbjct: 299 ALESGRAIVIALNKWDGMQPSERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYGSV 358
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ S+I TSR+T+ L A++ H P R KLRYAH GG NPP+IVIHGN+++
Sbjct: 359 QASFKSAITRWPTSRLTQILEDAVQEHQPPMVNSRRIKLRYAHLGGANPPLIVIHGNQVE 418
Query: 409 YIGNDYKRYLE 419
+ N Y RYLE
Sbjct: 419 KVPNSYVRYLE 429
>gi|398924367|ref|ZP_10661156.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM48]
gi|398952431|ref|ZP_10674779.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM33]
gi|426407856|ref|YP_007027955.1| GTP-binding protein EngA [Pseudomonas sp. UW4]
gi|398155185|gb|EJM43639.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM33]
gi|398173492|gb|EJM61326.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM48]
gi|426266073|gb|AFY18150.1| GTP-binding protein EngA [Pseudomonas sp. UW4]
Length = 490
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/434 (44%), Positives = 279/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
+NI+ ++ +F LG+G+ I+ +G GI LE L+ E P +
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEAALS-EFPRDEDEPQEGEEEEVV 178
Query: 168 --FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F ESGR+L++ +NKWD + ++R +K ++++L F+ +A +FISA+ + +
Sbjct: 299 LGFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QIEKVPKSYVRYLE 432
>gi|398893854|ref|ZP_10646363.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM55]
gi|398183476|gb|EJM70959.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM55]
Length = 490
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/434 (44%), Positives = 279/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ ++ +F LG+G+ I+ +G GI LE L+ E P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEAALS-EFPRDDDEPQEGEEEEIV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QIEKVPKSYVRYLE 432
>gi|388456391|ref|ZP_10138686.1| GTP-binding protein Der [Fluoribacter dumoffii Tex-KL]
Length = 466
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/420 (47%), Positives = 287/420 (68%), Gaps = 12/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT ++DALVA++PGLTRDR YG+ K +I++DTGG
Sbjct: 1 MIPVIALVGRPNVGKSTLFNRLTKTQDALVADFPGLTRDRQYGQAQHENKHYIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + M+KQ++ A+ E+DI++F+VDGR GL D+ I + LRK + + LV+NK
Sbjct: 61 GVD-DIAVDTLMSKQSEIALNEADIVLFLVDGRAGLTGIDEKIASNLRKLNKKVHLVVNK 119
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E ++ + DF+ LGI + H IS+ +G+GI+ L+ +L+ P+ + E N
Sbjct: 120 TEGLDDDVVCADFHALGIADVHSISSSHGSGIRTLLDEVLS---PFSTQSDEIEENN--- 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+A G+PNVGKSTLIN +LGE RV+ YD PGTTRDSI F + +KY+LIDTAG
Sbjct: 174 --AIKIAFAGRPNVGKSTLINRILGEERVVVYDMPGTTRDSIAIPFVRDEQKYMLIDTAG 231
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+++ E IEKFSVIKTL++I E+NV + LLDA + I+ QD+N+ FI ESG++L++
Sbjct: 232 VRRKSRIDEKIEKFSVIKTLQAIEESNVCLQLLDASEGITDQDLNLLGFIIESGKALVIA 291
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + ++ +K+ + ++L F +FA FISA+ + + + + IN Y+S++
Sbjct: 292 VNKWDGLDEEHKEQVKSELSRRLQFANFAKIRFISALHGSGVGNLFKDINEAYESAVQSF 351
Query: 360 STSRITRALIS-AIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST R+TR L + K+ PPC R KLRYAH GG NPP+IVIHGN+L + + YKRYL
Sbjct: 352 STPRLTRLLQDISTKHTPPCVNGR-RIKLRYAHLGGHNPPVIVIHGNQLADLPDSYKRYL 410
>gi|422023272|ref|ZP_16369777.1| GTP-binding protein Der [Providencia sneebia DSM 19967]
gi|414094040|gb|EKT55710.1| GTP-binding protein Der [Providencia sneebia DSM 19967]
Length = 493
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/443 (44%), Positives = 285/443 (64%), Gaps = 26/443 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + FIIIDTGG
Sbjct: 1 MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++G+ M Q+ QAI E+D+++F+VD R GL+ D+ I LR + LV NK
Sbjct: 61 DG-TEEGVETHMAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSRKKKTYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNI 177
++ I+++ + DFY LG+G + I+A +G G+ +E+ L IE+ ++ + E
Sbjct: 120 TDGIDANTVIGDFYALGLGEIYSIAASHGRGVTQLIEHSLKPFIEVDEEENVELTEEEAN 179
Query: 178 HSIEY----------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
+ IK+AIVG+PNVGKSTL N +LGE RV+ +D PG
Sbjct: 180 AAYWAELEAAEEGLEDEEDDFDPTGLPIKLAIVGRPNVGKSTLTNRILGEERVVVFDMPG 239
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++YILIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 240 TTRDSIYIPMERDGREYILIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDAR 299
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI +GRSL++ VNKWD + R+ +K+ ++ +L F+ FA +FISA
Sbjct: 300 EGISDQDLSLLGFILNAGRSLVIAVNKWDGMKPEDREHVKDMLELRLGFVDFARIHFISA 359
Query: 336 IKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGK 395
+ + + + ES+ Y+S+ + T+ +TR + A H P + R K++YAH GG
Sbjct: 360 LHGSGVGNLFESVQEAYESATRRVGTALLTRIMKMAEDEHQPPLIRGRRVKMKYAHAGGH 419
Query: 396 NPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++ + + YKRYL
Sbjct: 420 NPPIVVIHGNQVSDLPDSYKRYL 442
>gi|406936113|gb|EKD69916.1| hypothetical protein ACD_46C00700G0003 [uncultured bacterium]
Length = 438
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/419 (46%), Positives = 283/419 (67%), Gaps = 10/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PVL +VGRPNVGKSTLFNRLT SRDAL++++PG TRDR YGE + ++ FIIIDTGG
Sbjct: 1 MLPVLAIVGRPNVGKSTLFNRLTRSRDALISDFPGTTRDRQYGEVNLHERHFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E+ + +T+Q QAI ++D I+F+VD + G+ +DK+I + LRK+G+P L +NK
Sbjct: 61 TEEIDD-VGKLITQQALQAIEDADKILFLVDAQAGITPEDKMIADSLRKAGKPFFLAVNK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +IS D YELG+G P ISA +G G+ ++ + P + ++++FT I
Sbjct: 120 TDGTDPNISTADAYELGLGTPLPISAAHGTGVMTLVQTLFP--EPTEISIEEEKFTGI-- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
K+AIVG+PNVGKSTL N +LGE RVI +D+PGTTRDSI E K Y LIDTAG
Sbjct: 176 ----KLAIVGRPNVGKSTLTNRMLGEERVIVHDSPGTTRDSIFIPLERYEKHYTLIDTAG 231
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K +V EKFSV+KTL++I A+VV+ ++DA+ +S QD+ + FI E G++L++
Sbjct: 232 VRKRKKVADVPEKFSVVKTLQAIESAHVVLYIIDARIGVSEQDLKLLGFILECGKALVIA 291
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + R+ K I ++L+F+SFA +FISA+ + + + ES++ Y+S+ L
Sbjct: 292 INKWDGMTEEAREHAKATIDRQLDFVSFAKIHFISALHGSGVGNLFESVDEAYESATKKL 351
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS +TR L A+ H P R KLRYAH GG NPP ++IHGN++ + Y+++L
Sbjct: 352 STSLLTRLLQQALVTHSPPLVHGRRIKLRYAHPGGNNPPRVIIHGNQVDELPESYRKFL 410
>gi|392547034|ref|ZP_10294171.1| GTP-binding protein Der [Pseudoalteromonas rubra ATCC 29570]
Length = 490
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/439 (44%), Positives = 277/439 (63%), Gaps = 22/439 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ FI++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANYDGYEFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI EM +Q+ AI E+D+++F+VD R G+ D+ I LRK + +V NK
Sbjct: 61 DGS-EEGIETEMAEQSLLAIEEADVVLFLVDARAGMTAADQAIAQHLRKQQKKSFVVANK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILT------------------- 160
++ I++ S +FY+L +G + I+A +G G+ LE L
Sbjct: 120 TDGIDADSNCAEFYQLALGEVYHIAAAHGRGVTQLLEATLGPVIAELASEEDEIEQDDEL 179
Query: 161 -IELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
EL + +E + IK+AI+G+PNVGKSTL N +LGE RVI YD PGTTRD
Sbjct: 180 LTELYLEGEEAPEEGKTGFEDKPIKLAIIGRPNVGKSTLTNRILGEERVIVYDMPGTTRD 239
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI N + Y+LIDTAG+R+R K +V+EKFSVIKTLK+I +ANV++L++DA+ IS
Sbjct: 240 SIYIPMTRNERDYVLIDTAGVRKRKKVSDVVEKFSVIKTLKAIEDANVILLVIDARDGIS 299
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+++ F +GRSL++ VNKWD + ++ IK+ + ++L F+ FA +FISA+
Sbjct: 300 DQDLSLLGFALNAGRSLVIAVNKWDGLDDYVKERIKSELDRRLGFIDFARLHFISALHGT 359
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ ES+ Y+S+ +ST+ + R + A +H P + R KL+YAH GG NPP
Sbjct: 360 GVGHLFESVEEAYESATKRVSTAMLRRIMDMAQADHQPPLVRGRRVKLKYAHAGGYNPPR 419
Query: 400 IVIHGNRLKYIGNDYKRYL 418
IVIHGN++ + + YKRYL
Sbjct: 420 IVIHGNQVHDLPDSYKRYL 438
>gi|422643978|ref|ZP_16707117.1| GTP-binding protein Der [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330957531|gb|EGH57791.1| GTP-binding protein Der [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 489
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/433 (43%), Positives = 279/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M KQ+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAKQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+NI+ +++ +F +G+G+ ++ +G GI LE L+ E P +
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLEIALS-EFPKDEDELEEGEVEEVA 178
Query: 170 ---KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + + +
Sbjct: 299 GFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLYQ 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 VEKVPKSYVRYLE 431
>gi|320539280|ref|ZP_08038950.1| ribosome-associated GTPase [Serratia symbiotica str. Tucson]
gi|320030672|gb|EFW12681.1| ribosome-associated GTPase [Serratia symbiotica str. Tucson]
Length = 495
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/444 (43%), Positives = 282/444 (63%), Gaps = 27/444 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M V+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG + FII+DTGG
Sbjct: 1 MISVVALVGRPNVGKSTLFNRLTQTRDALVADFPGLTRDRKYGRAEVEGNEFIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M Q+ AI E+DI++F+VD R GL+ D+ I LR + LV+NK
Sbjct: 61 DGH-EDGVETRMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRNRQKATFLVVNK 119
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPY-------------K 166
++ ++ + + DFY LG+G + I+A +G G++ +E++L LP
Sbjct: 120 TDGLDPDVVTADFYSLGLGEVYAIAASHGRGVRQLIEHVLMPFLPEKEEEVELTEEEANA 179
Query: 167 KFFKKKEFTNIHSIEY------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
++ ++ N+ E IK+AIVG+PNVGKSTL N +LGE RV+ YD P
Sbjct: 180 AYWVEQNAENLEGEEDEPEDDFNPQDLAIKLAIVGRPNVGKSTLTNRILGEERVVVYDMP 239
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDSI + ++Y+LIDTAG+R+ K E +EKFSVIKTL++I +ANVV+L++DA
Sbjct: 240 GTTRDSIYIPMVRDEREYVLIDTAGVRKHGKVTETVEKFSVIKTLQAIEDANVVLLVIDA 299
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
++ IS +D+++ FI SGRSL++ VNKWD + +R +K + +L F+ FA +FIS
Sbjct: 300 REGISDRDLSLLGFILNSGRSLVIVVNKWDGMSEEERTHVKEMLDLRLGFVDFARVHFIS 359
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGG 394
A+ + + + ES+ Y + ++TS +T+ + A+ +H P + R KL+YAH GG
Sbjct: 360 ALHGSGVGNLFESVLEAYACATHRVNTSMLTKIMHMAVDDHQPPLVRGRRVKLKYAHAGG 419
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYL 418
NPPI+VIHGN++ + + YKRYL
Sbjct: 420 YNPPIVVIHGNQVSDLSDSYKRYL 443
>gi|77460818|ref|YP_350325.1| GTP-binding protein EngA [Pseudomonas fluorescens Pf0-1]
gi|398978319|ref|ZP_10687694.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM25]
gi|123603396|sp|Q3K7C0.1|DER_PSEPF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|77384821|gb|ABA76334.1| GTP-binding protein [Pseudomonas fluorescens Pf0-1]
gi|398137119|gb|EJM26185.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM25]
Length = 490
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/434 (43%), Positives = 278/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEAALS-DFPRDDDEPAEGEEEEVV 178
Query: 168 --FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QIEKVPKSYVRYLE 432
>gi|339485854|ref|YP_004700382.1| GTP-binding protein EngA [Pseudomonas putida S16]
gi|431800912|ref|YP_007227815.1| GTP-binding protein Der [Pseudomonas putida HB3267]
gi|338836697|gb|AEJ11502.1| GTP-binding protein EngA [Pseudomonas putida S16]
gi|430791677|gb|AGA71872.1| GTP-binding protein Der [Pseudomonas putida HB3267]
Length = 487
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/431 (43%), Positives = 274/431 (63%), Gaps = 14/431 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YG+ +SFI+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDATWQGRSFILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D ++F+VD R G+ D++I LRK + +LV NK
Sbjct: 61 TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKEAILVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+NI++ ++ +F LG+GN ++ G GI +E +L LP + + +
Sbjct: 120 IDNIDADVARAEFSPLGMGNAIPVAGSQGRGINALMEAVLG-HLPRDQVEEALDAEVAEG 178
Query: 180 IEY-----------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
E IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE +
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERD 238
Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
++KY IDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 239 DEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298
Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
E+GR++++ +NKWD + +R +K ++++L F+ FA +FISA+ + +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMEPGERDYVKTELERRLFFVDFADIHFISALHGTGVGHLYKSV 358
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+
Sbjct: 359 QAAFKSAVTRWPTSRLTQILEDAVSEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTD 418
Query: 409 YIGNDYKRYLE 419
I Y RYLE
Sbjct: 419 KIPKSYSRYLE 429
>gi|325272131|ref|ZP_08138563.1| GTP-binding protein Der [Pseudomonas sp. TJI-51]
gi|324102727|gb|EGC00142.1| GTP-binding protein Der [Pseudomonas sp. TJI-51]
Length = 487
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/431 (43%), Positives = 275/431 (63%), Gaps = 14/431 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YG+ +SFI+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D ++F+VD R G+ D++I LRK + +LV NK
Sbjct: 61 TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKEAILVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+NI++ ++ +F LG+GN ++ G GI +E +L LP + + +
Sbjct: 120 IDNIDADVARAEFSPLGMGNAIPVAGSQGRGINALMEAVLG-HLPRDQVEEALDADVAEG 178
Query: 180 IEY-----------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
E IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE +
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERD 238
Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
+KY IDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298
Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
E+GR++++ +NKWD + +R +K ++++L F+ FA +FISA+ + + +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMQPGERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSV 358
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+ +
Sbjct: 359 QAAFKSAVTRWPTSRLTQILEDAVSEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTE 418
Query: 409 YIGNDYKRYLE 419
I Y RYLE
Sbjct: 419 KIPKSYSRYLE 429
>gi|389704833|ref|ZP_10185937.1| GTP-binding protein Der [Acinetobacter sp. HA]
gi|388611077|gb|EIM40186.1| GTP-binding protein Der [Acinetobacter sp. HA]
Length = 470
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 287/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+D+IIF+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDSY-MAEQSKTAIHEADMIIFVVDARAGLLASDEQIARELRTLGKKVFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE +L ++P + E H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEEVLA-DVP------EDESEAEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE + +KY LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYAIEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ YDSS +
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYDSSHLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S ++IT+ L A + H P + R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKITQILQDATEAHQPPTVQGRRIKMRYAHIGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|398845263|ref|ZP_10602304.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM84]
gi|398253715|gb|EJN38831.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM84]
Length = 487
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/430 (43%), Positives = 278/430 (64%), Gaps = 12/430 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YG+ +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D ++F+VD R G+ D++I LRK + +LV NK
Sbjct: 61 TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKSAILVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENIL-------TIELPYKKFFKKK 172
+NI++ ++ +F LG+GN ++ G GI +E++L E ++ + +
Sbjct: 120 IDNIDADVARAEFSPLGMGNAIPVAGSQGRGINQLMESVLGHIPRDAEEEALDQEVAEGE 179
Query: 173 EFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
E I + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE +
Sbjct: 180 EAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERDG 239
Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
+KY IDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 240 EKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299
Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
E+GR++++ +NKWD + +R +K ++++L F+ FA +FISA+ + + +S+
Sbjct: 300 LEAGRAIVIALNKWDGMEPGERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSVQ 359
Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
+ S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+ +
Sbjct: 360 AAFKSAVTRWPTSRLTQILEDAVSEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTEK 419
Query: 410 IGNDYKRYLE 419
I Y RYLE
Sbjct: 420 IPKSYSRYLE 429
>gi|335420579|ref|ZP_08551617.1| GTP-binding protein Der [Salinisphaera shabanensis E1L3A]
gi|334894938|gb|EGM33123.1| GTP-binding protein Der [Salinisphaera shabanensis E1L3A]
Length = 446
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/418 (42%), Positives = 273/418 (65%), Gaps = 10/418 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
PVL LVGRPNVGKSTLFNRLT +RDALVA+ PG+TRDRHYG + +I++DTGG
Sbjct: 2 PVLALVGRPNVGKSTLFNRLTRTRDALVADQPGVTRDRHYGFASYDGQRYIVVDTGGIGQ 61
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ + I + QT+ A+ E+D+++F+VD RQGL+ D++I LR+ +P+ +V+NKSE
Sbjct: 62 D-DEDIDSQALAQTRAALEEADVVLFVVDSRQGLMGGDEMIAEQLRRIDRPVHVVVNKSE 120
Query: 123 -NINSSISLDFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIHSI 180
+ ++ +F+ L G+P +SA++G+ I L ++ + P + H
Sbjct: 121 GQVGATAVAEFHALAFGDPWAVSAIHGDRISILLAHVFEHLPAPRAQVLP-------HQR 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I++A++G+PN GKSTL+N LLGE R++T D PGTTRD++ S F +++K Y+++DTAGI
Sbjct: 174 GAIRLALLGRPNAGKSTLVNRLLGETRMLTQDAPGTTRDAVASEFSFDDKPYVIVDTAGI 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR + + +EK SV+K ++++ A VVI++LDA +SAQDI + N E GR++++ V
Sbjct: 234 RRRARIDDDVEKVSVVKAMQAMEAAQVVIVMLDAASGLSAQDIRLLNMAVERGRAVVIAV 293
Query: 301 NKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
NKWD + QR+ + + K++ + FISA+ + + M++I + ++ LS
Sbjct: 294 NKWDGLEGKQREKLHAELVKRIGAFDYLPLLFISALHGSGLRDLMDAIQASHKAAFAELS 353
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T+ ++R L A+ H P R KLRYAHQGG+NPP IVIHGN+ + + ++YKRYL
Sbjct: 354 TNALSRTLEDAVDGHSPPAIHGRRIKLRYAHQGGRNPPTIVIHGNQTQRVSDEYKRYL 411
>gi|167031915|ref|YP_001667146.1| GTP-binding protein EngA [Pseudomonas putida GB-1]
gi|189037155|sp|B0KPJ1.1|DER_PSEPG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166858403|gb|ABY96810.1| small GTP-binding protein [Pseudomonas putida GB-1]
Length = 487
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/431 (43%), Positives = 277/431 (64%), Gaps = 14/431 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YG+ +SFI+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDATWQGRSFILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D ++F+VD R G+ D++I LRK + +LV NK
Sbjct: 61 TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKSAILVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPY--------KKFFKK 171
+NI+ ++ +F +G+GN ++ G GI +E +L LP ++ +
Sbjct: 120 IDNIDPDVARAEFSPMGMGNAIPVAGSQGRGINALMEAVLG-HLPRDAEDEALDQEVAEG 178
Query: 172 KEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
+E I + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE +
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERD 238
Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
+KY IDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298
Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
E+GR++++ +NKWD + +R +K ++++L F+ FA +FISA+ + + +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMEPGERAYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSV 358
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+ +
Sbjct: 359 QAAFKSAVTRWPTSRLTQILEDAVSEHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTE 418
Query: 409 YIGNDYKRYLE 419
I Y RYLE
Sbjct: 419 SIPKSYSRYLE 429
>gi|26987593|ref|NP_743018.1| GTP-binding protein EngA [Pseudomonas putida KT2440]
gi|37999649|sp|Q88PJ3.1|DER_PSEPK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|24982270|gb|AAN66482.1|AE016277_1 GTP-binding protein EngA [Pseudomonas putida KT2440]
Length = 487
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/430 (42%), Positives = 272/430 (63%), Gaps = 12/430 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YG+ +SFI+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D ++F+VD R G+ D++I LRK + +LV NK
Sbjct: 61 TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENIL----------TIELPYKKFF 169
+NI+ ++ +F +G+GN ++ G GI +E +L +E +
Sbjct: 120 IDNIDPDVARAEFSPMGMGNAIPVAGSQGRGINALMEAVLGHLPRDAEEEALEQDVAEGE 179
Query: 170 KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
+ + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE +
Sbjct: 180 EAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERDG 239
Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
+KY IDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 240 EKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299
Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
E+GR++++ +NKWD + +R +K ++++L F+ FA +FISA+ + + +S+
Sbjct: 300 LEAGRAIVIALNKWDGMEPGERAYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSVQ 359
Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
+ S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+
Sbjct: 360 AAFQSAVTRWPTSRLTQILEDAVSEHQPPMVNGRRIKLRYAHLGGANPPLIVIHGNQTDS 419
Query: 410 IGNDYKRYLE 419
I Y RYLE
Sbjct: 420 IPKSYSRYLE 429
>gi|398874318|ref|ZP_10629529.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM74]
gi|398195387|gb|EJM82434.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM74]
Length = 489
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 279/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEIALS-DFPKDDDELEEGEEEDVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|386010520|ref|YP_005928797.1| protein EngA [Pseudomonas putida BIRD-1]
gi|313497226|gb|ADR58592.1| EngA [Pseudomonas putida BIRD-1]
Length = 487
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/430 (42%), Positives = 272/430 (63%), Gaps = 12/430 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YG+ +SFI+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D ++F+VD R G+ D++I LRK + +LV NK
Sbjct: 61 TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENIL----------TIELPYKKFF 169
+NI+ ++ +F +G+GN ++ G GI +E +L +E +
Sbjct: 120 IDNIDPDVARAEFSPMGMGNAIPVAGSQGRGINALMEAVLGHLPRDAEDEALEQDVAEGE 179
Query: 170 KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
+ + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE +
Sbjct: 180 EAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERDG 239
Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
+KY IDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 240 EKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299
Query: 290 YESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESIN 349
E+GR++++ +NKWD + +R +K ++++L F+ FA +FISA+ + + +S+
Sbjct: 300 LEAGRAIVIALNKWDGMEPGERAYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSVQ 359
Query: 350 HVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKY 409
+ S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+
Sbjct: 360 AAFQSAVTRWPTSRLTQILEDAVSEHQPPMVNGRRIKLRYAHLGGANPPLIVIHGNQTDS 419
Query: 410 IGNDYKRYLE 419
I Y RYLE
Sbjct: 420 IPKSYSRYLE 429
>gi|148546131|ref|YP_001266233.1| GTP-binding protein EngA [Pseudomonas putida F1]
gi|395447295|ref|YP_006387548.1| GTP-binding protein EngA [Pseudomonas putida ND6]
gi|397696921|ref|YP_006534804.1| GTP-binding protein engA [Pseudomonas putida DOT-T1E]
gi|421524495|ref|ZP_15971117.1| GTP-binding protein Der [Pseudomonas putida LS46]
gi|166225843|sp|A5VYT9.1|DER_PSEP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|148510189|gb|ABQ77049.1| small GTP-binding protein [Pseudomonas putida F1]
gi|388561292|gb|AFK70433.1| GTP-binding protein EngA [Pseudomonas putida ND6]
gi|397333651|gb|AFO50010.1| GTP-binding protein engA [Pseudomonas putida DOT-T1E]
gi|402751674|gb|EJX12186.1| GTP-binding protein Der [Pseudomonas putida LS46]
Length = 487
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/431 (43%), Positives = 274/431 (63%), Gaps = 14/431 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YG+ +SFI+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D ++F+VD R G+ D++I LRK + +LV NK
Sbjct: 61 TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKAAILVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPY--------KKFFKK 171
+NI+ ++ +F +G+GN ++ G GI +E +L LP + +
Sbjct: 120 IDNIDPDVARAEFSPMGMGNAIPVAGSQGRGISALMEAVLG-HLPRDAEDEALEQDVAEG 178
Query: 172 KEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
+E I + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE +
Sbjct: 179 EEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDSIYIPFERD 238
Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
KY IDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 239 GDKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298
Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
E+GR++++ +NKWD + +R +K ++++L F+ FA +FISA+ + + +S+
Sbjct: 299 ALEAGRAIVIALNKWDGMEPGERAYVKTELERRLFFVDFADIHFISALHGTGVGNLYKSV 358
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+
Sbjct: 359 QAAFQSAVTRWPTSRLTQILEDAVSEHQPPMVNGRRIKLRYAHLGGANPPLIVIHGNQTD 418
Query: 409 YIGNDYKRYLE 419
I Y RYLE
Sbjct: 419 SIPKSYSRYLE 429
>gi|398911097|ref|ZP_10655358.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM49]
gi|398184707|gb|EJM72143.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM49]
Length = 489
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 279/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLEIALS-DFPKDEDELEEGEEEDVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F ESGR+L++ +NKWD + ++R +K ++++L F+ +A +FISA+ + +
Sbjct: 299 GFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNSRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|29654548|ref|NP_820240.1| GTP-binding protein EngA [Coxiella burnetii RSA 493]
gi|153208833|ref|ZP_01947057.1| GTP-binding protein EngA [Coxiella burnetii 'MSU Goat Q177']
gi|154706295|ref|YP_001424682.1| GTP-binding protein EngA [Coxiella burnetii Dugway 5J108-111]
gi|161830868|ref|YP_001597096.1| GTP-binding protein EngA [Coxiella burnetii RSA 331]
gi|165921454|ref|ZP_02219642.1| GTP-binding protein EngA [Coxiella burnetii Q321]
gi|212218660|ref|YP_002305447.1| GTP-binding protein EngA [Coxiella burnetii CbuK_Q154]
gi|41017032|sp|Q83C83.1|DER_COXBU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037144|sp|A9KFU3.1|DER_COXBN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037145|sp|A9NDV6.1|DER_COXBR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238058971|sp|B6J7Q3.1|DER_COXB1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|29541815|gb|AAO90754.1| GTP-binding protein [Coxiella burnetii RSA 493]
gi|120575684|gb|EAX32308.1| GTP-binding protein EngA [Coxiella burnetii 'MSU Goat Q177']
gi|154355581|gb|ABS77043.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111]
gi|161762735|gb|ABX78377.1| GTP-binding protein EngA [Coxiella burnetii RSA 331]
gi|165916769|gb|EDR35373.1| GTP-binding protein EngA [Coxiella burnetii Q321]
gi|212012922|gb|ACJ20302.1| GTP-binding protein [Coxiella burnetii CbuK_Q154]
Length = 443
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/419 (46%), Positives = 270/419 (64%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGRPNVGKSTLFN LT SR ALVA+ PG+TRDR YGE I + +++DTGG
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
K + Q +QAI ESD I+F+VD + GLV D++I LRK G+ I L +NK
Sbjct: 61 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKKIFLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ +++ DFY+LG G P++I+A G G+K+ + +L LP +K +KE
Sbjct: 121 ADRARAAVVQSDFYKLGFGEPYVIAAASGRGVKDLMTQVLE-NLPEEKEVIEKEVG---- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+A++G+PNVGKSTLIN LLGE RVI YD PGTTRDSI F N++ Y LIDTAG
Sbjct: 176 ---IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K + +EKFS+IK+L+++ A+VVI LLDA+Q ++ QD+ + N I E+G SLI+
Sbjct: 233 IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +R ++N I +++ F+ FA FISA+ + +I Y S L
Sbjct: 293 VNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQEL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+T ++TRAL A+ H P K R +LRYAH G ++P IV+HG + K + Y RYL
Sbjct: 353 TTGQLTRALEKAVAEHEPPLVKGRRIRLRYAHLGARHPLTIVVHGKQTKSLPQSYSRYL 411
>gi|70732274|ref|YP_262030.1| GTP-binding protein Der [Pseudomonas protegens Pf-5]
gi|123653208|sp|Q4K6V3.1|DER_PSEF5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|68346573|gb|AAY94179.1| ribosome-associated GTPase EngA [Pseudomonas protegens Pf-5]
Length = 490
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 280/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + ++ NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKRNKTSYVIANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ ++ +F LG+G+ I+ +G GI LE L+ E P
Sbjct: 120 VDNIDPDMARAEFAPLGMGDAIPIAGAHGRGITQMLEIALS-EFPKDDADEPEEGEEEIV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMQPSERDYVKTELQRRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|293610300|ref|ZP_06692601.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423137|ref|ZP_18913303.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-136]
gi|292827532|gb|EFF85896.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425700237|gb|EKU69828.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-136]
Length = 469
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ I LV NK
Sbjct: 61 GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L E+P + E H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAATHGRGVQQMLEDVLA-EVP------EDENPEEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGDLYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|28868645|ref|NP_791264.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213971514|ref|ZP_03399625.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato T1]
gi|301386119|ref|ZP_07234537.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato Max13]
gi|302060181|ref|ZP_07251722.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato K40]
gi|302135124|ref|ZP_07261114.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|422587119|ref|ZP_16661790.1| GTP-binding protein Der [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|422652859|ref|ZP_16715636.1| GTP-binding protein Der [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|422660778|ref|ZP_16723183.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|37999588|sp|Q886Y6.1|DER_PSESM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|28851883|gb|AAO54959.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213923706|gb|EEB57290.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato T1]
gi|330872875|gb|EGH07024.1| GTP-binding protein Der [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330965919|gb|EGH66179.1| GTP-binding protein Der [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|331019376|gb|EGH99432.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 489
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 278/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+NI+ +++ +F +G+G+ ++ +G GI LE I E P +
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEVEEVA 178
Query: 170 ---KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + + +
Sbjct: 299 GFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLYQ 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 VEKVPKSYVRYLE 431
>gi|375137037|ref|YP_004997687.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2]
gi|325124482|gb|ADY84005.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2]
Length = 469
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/421 (45%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ I LV NK
Sbjct: 61 GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G GI+ LE++L E+P + E H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGIQQMLEDVLA-EVP------EDENPEEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGDLYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|422665491|ref|ZP_16725363.1| GTP-binding protein Der [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|424066445|ref|ZP_17803911.1| GTP-binding protein EngA [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|424071097|ref|ZP_17808524.1| GTP-binding protein EngA [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|440720318|ref|ZP_20900737.1| GTP-binding protein Der [Pseudomonas syringae BRIP34876]
gi|440726446|ref|ZP_20906700.1| GTP-binding protein Der [Pseudomonas syringae BRIP34881]
gi|330975909|gb|EGH75975.1| GTP-binding protein Der [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|407999556|gb|EKG39938.1| GTP-binding protein EngA [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|408002294|gb|EKG42553.1| GTP-binding protein EngA [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|440366354|gb|ELQ03438.1| GTP-binding protein Der [Pseudomonas syringae BRIP34876]
gi|440366607|gb|ELQ03686.1| GTP-binding protein Der [Pseudomonas syringae BRIP34881]
Length = 490
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 278/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
+NI+ +++ +F +G+G+ ++ +G GI LE I E P +
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPRDEDELEEGAEVEEV 178
Query: 168 --FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|404403289|ref|ZP_10994873.1| GTP-binding protein Der [Pseudomonas fuscovaginae UPB0736]
Length = 490
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/434 (43%), Positives = 277/434 (63%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT SRDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRSRDAIVGDLSGLTRDRQYGEAKWQGRSYIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
+NI+ ++ +F +G+G+ I+ +G GI LE L+ + P +
Sbjct: 120 IDNIDPDMARAEFSPMGLGDAIPIAGAHGRGITQMLEVALS-DFPRDDEEEPPEGEEEEV 178
Query: 172 ------KEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F ESGR++++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALESGRAIVIALNKWDGMTPGERDYVKTELERRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVNNRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|149908865|ref|ZP_01897525.1| GTP-binding protein EngA [Moritella sp. PE36]
gi|149808139|gb|EDM68080.1| GTP-binding protein EngA [Moritella sp. PE36]
Length = 493
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 278/442 (62%), Gaps = 25/442 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ + + FI++DTGG
Sbjct: 1 MTPVIALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQANLAGREFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI +M Q+ AI E+D ++F+VD R GL+ D+ I LRK + + LV NK
Sbjct: 61 NGD-EEGIDAKMADQSLLAIEEADAVLFMVDARAGLMVADQAIAEHLRKQQKKVFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-----IELPYKKFFKKKEF 174
+ ++ +++ +FY L +G+ + I+A G GI +E L ++F F
Sbjct: 120 VDGLDGDVAVAEFYALALGDIYQIAASQGRGINILIEEALAHVEVADAEDEEEFSDADPF 179
Query: 175 TNIH--------------SIEY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGT 216
N + +Y IK+A++G PNVGKSTL+N +LGE RV+ YD PGT
Sbjct: 180 VNGELLPEEEEGEEDEQTAEDYARLPIKLAMIGCPNVGKSTLVNRILGEERVVVYDMPGT 239
Query: 217 TRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQ 276
TRDSI E + Y+LIDTAG+RRR E +EKFS++K L++I +ANVV+++LDA+
Sbjct: 240 TRDSIYIPMERAGRNYMLIDTAGVRRRKNINEAVEKFSIVKALQAIDDANVVLMVLDARV 299
Query: 277 NISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAI 336
+++QD+ + F SGRS+++ +NKWD + + IK+ + ++L F+ FA +FISA+
Sbjct: 300 GVTSQDLTLLGFAINSGRSIVIAINKWDGLDAGVKDRIKSELDRRLGFIDFARIHFISAL 359
Query: 337 KLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKN 396
+ + ESI +DSS +STS +TR + A+ +H P R KLRYAH GG N
Sbjct: 360 HGTGVGNLFESITEAFDSSTKRVSTSMLTRIVRMAVDDHQPPMHAGRRVKLRYAHAGGYN 419
Query: 397 PPIIVIHGNRLKYIGNDYKRYL 418
PP+IV+HGN++ + Y+RYL
Sbjct: 420 PPLIVVHGNQVTKLSGSYRRYL 441
>gi|381151858|ref|ZP_09863727.1| ribosome-associated GTPase EngA [Methylomicrobium album BG8]
gi|380883830|gb|EIC29707.1| ribosome-associated GTPase EngA [Methylomicrobium album BG8]
Length = 464
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 276/419 (65%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN LT +R+ALVA+YPGLTRDR YG G + +++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNYLTRTREALVADYPGLTRDRQYGRVRYGDMACLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + GI KQ + A+ E+D++ F+VD R+GL D++I LRK G+PIVLV+NK
Sbjct: 61 ADDAE-GIDSFSGKQVRIALEEADVVFFLVDAREGLSASDEVIAKDLRKLGKPIVLVVNK 119
Query: 121 SENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ I++ +++ DF+ L +G P I+A +G G+ + L + +
Sbjct: 120 IDGIDAHTVAADFHALALGEPVYIAAAHGRGVADLLAG-------SRHLLPSVQEEPEAG 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I +A+VG+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE K++ LIDTAG
Sbjct: 173 PKGISIAVVGRPNVGKSTLVNRLLGEERVVVFDEPGTTRDSIYIPFERGGKRFTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + E IEKFSVIK+L++I ++NVVI L+DA + ++ QD ++ + E+G++LI+
Sbjct: 233 MRRRARIAETIEKFSVIKSLQAIEKSNVVIYLIDASEGVTDQDAHLLGLVLETGKALIIG 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + Q+++++ + KL+F+ FA + ISA+ + + + ++ +Y ++++ L
Sbjct: 293 LNKWDGLSVEQKEMVRRQLDLKLSFVDFAEKHPISALHGSGVGKLFDVVHSLYQAAMVDL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST +TR L A H P R KL+YAHQGG+NPP++VIHG + + N YKR+L
Sbjct: 353 STPLLTRLLKEATDAHQPPMVNNRRIKLKYAHQGGRNPPVVVIHGIQTDALPNAYKRFL 411
>gi|389808186|ref|ZP_10204596.1| GTP-binding protein Der [Rhodanobacter thiooxydans LCS2]
gi|388443064|gb|EIL99223.1| GTP-binding protein Der [Rhodanobacter thiooxydans LCS2]
Length = 467
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 274/421 (65%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN LT SRDALVA+ PG+TRDRHYG IG++ F+++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNVLTRSRDALVADMPGVTRDRHYGICRIGERPFVVVDTGGL 60
Query: 61 EPEVKKGIMHEMT-KQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ M +T KQ + AI E+D+++F+VD R GL+ QD I LR+SG+PIV V+N
Sbjct: 61 SG--TEDAMDVLTAKQVRLAIAEADVLVFVVDARDGLLPQDDAILAELRRSGKPIVAVVN 118
Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K++ ++ ++ +F+ GIG +SA + G +FL +L + LP + +
Sbjct: 119 KTDGLDEQAVMAEFFAFGIGATLPLSAAHNRGTDDFLRVLLPL-LPADREPATETGDEDG 177
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
SI +VAIVG+PN GKSTLIN LLGE R+I D GTTRD I+ E + K+Y LIDTA
Sbjct: 178 SI---RVAIVGRPNAGKSTLINRLLGEERLIVSDVAGTTRDPIRVPLERDGKRYTLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR+ + E +EKFSVIKTL+SI A V ++++DA++N++ QD+ + + + GR+L++
Sbjct: 235 GIRRKARVEEAVEKFSVIKTLQSIAAAQVAVVMIDARENLADQDLTLIGYAIDEGRALVI 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR + + ++L F+ +A ISA+ + + M ++ + S+
Sbjct: 295 AINKWDDMDAYQRDECRRALDRRLVFVDWAKQVQISALHGSGLRELMRAVVRAHASATRE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
L +S +T+AL A +++ P PKLR+AH GG NPP IVIHG+R K+I Y+RYL
Sbjct: 355 LVSSDLTKALEKAYESYQPPLVNGHAPKLRFAHPGGTNPPTIVIHGSRTKHIAPAYQRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|410089057|ref|ZP_11285686.1| GTP-binding protein Der [Pseudomonas viridiflava UASWS0038]
gi|409763716|gb|EKN48670.1| GTP-binding protein Der [Pseudomonas viridiflava UASWS0038]
Length = 489
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 278/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
+NI+ +++ +F +G+G+ ++ +G GI LE I E P +
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPRDEDDQEDAEVEEVA 178
Query: 168 -FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + + +
Sbjct: 299 GFALEAGRALVIALNKWDGMTPGERDYVKVELERRLFFVDFADIHFISALHGTGVGNLYQ 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 VEKVPKSYVRYLE 431
>gi|422403708|ref|ZP_16480765.1| GTP-binding protein Der, partial [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330874711|gb|EGH08860.1| GTP-binding protein Der [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 440
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 278/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ +++ +F +G+G+ ++ +G GI LE I E P
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEEVEEV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|402698614|ref|ZP_10846593.1| GTP-binding protein Der [Pseudomonas fragi A22]
Length = 489
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 279/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPELARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDPEEEEEGEAEVVL 178
Query: 170 ---KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R+ +K + ++L F+ FA +FISA+ + + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSEREFVKVELTRRLFFVDFADIHFISALHGTGVGNLYQ 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 VEKVPKSYVRYLE 431
>gi|239500761|ref|ZP_04660071.1| GTP-binding protein EngA [Acinetobacter baumannii AB900]
gi|417555569|ref|ZP_12206638.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-81]
gi|417562822|ref|ZP_12213701.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC137]
gi|421201271|ref|ZP_15658430.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC109]
gi|421454304|ref|ZP_15903653.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-123]
gi|421634179|ref|ZP_16074798.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-13]
gi|421677542|ref|ZP_16117434.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC111]
gi|421805779|ref|ZP_16241655.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-A-694]
gi|395525404|gb|EJG13493.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC137]
gi|395563303|gb|EJG24956.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC109]
gi|400213071|gb|EJO44028.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-123]
gi|400391986|gb|EJP59033.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-81]
gi|408704897|gb|EKL50253.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-13]
gi|410393298|gb|EKP45652.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC111]
gi|410408041|gb|EKP60016.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-A-694]
Length = 469
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ I LV NK
Sbjct: 61 GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L ++P + E H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLQ-DIP------EDESPEEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWARIHLISALHGTGVGELYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A H P + R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILNDATDQHQPPTVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|104780244|ref|YP_606742.1| GTP-binding protein EngA [Pseudomonas entomophila L48]
gi|166225841|sp|Q1IEH7.1|DER_PSEE4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|95109231|emb|CAK13928.1| GTP-binding protein EngA [Pseudomonas entomophila L48]
Length = 488
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/431 (43%), Positives = 277/431 (64%), Gaps = 14/431 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YG+ +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D ++F+VD R G+ D++I LRK + +LV NK
Sbjct: 61 TGD-EVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKRNKEAILVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPY--------KKFFKK 171
+NI++ ++ +F LG+GN ++ G GI +E +L +P + +
Sbjct: 120 IDNIDADVARAEFSPLGMGNAIPVAGSQGRGINALMEAVLG-HIPRDPVEDALDEDVAEG 178
Query: 172 KEFTNI---HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
+E T I + IK+AI+G+PNVGKSTL+N +LGE RV+ YD PGTTRDSI FE +
Sbjct: 179 EEATRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDQPGTTRDSIYIPFERD 238
Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
+KY IDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+ F
Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF 298
Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
++GR++++ +NKWD + +R +K ++++L F+ FA +FISA+ + +S+
Sbjct: 299 ALDAGRAVVIALNKWDGMEPGERDYVKTELERRLFFVDFADIHFISALHGTGVGHLYKSV 358
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ S++ TSR+T+ L AI H P R KLRYAH GG NPP+IVIHGN+
Sbjct: 359 QAAFMSAVTRWPTSRLTQILEDAISVHQPPLVNGRRIKLRYAHLGGANPPLIVIHGNQTD 418
Query: 409 YIGNDYKRYLE 419
I N Y RYLE
Sbjct: 419 KIPNSYSRYLE 429
>gi|398907347|ref|ZP_10653796.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM50]
gi|398171713|gb|EJM59610.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM50]
Length = 489
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 279/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDEEPEDGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|406037300|ref|ZP_11044664.1| GTP-binding protein Der [Acinetobacter parvus DSM 16617 = CIP
108168]
Length = 469
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 287/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+D+IIF+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDTY-MAEQSKTAIHEADMIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE +L E+P + E H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPIQVAASHGRGVQQMLEEVLA-EVP------EDENPEEHN 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +ANVV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDANVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+SS +
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESSNLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILNDATEAHQPPSIGGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|395500499|ref|ZP_10432078.1| GTP-binding protein Der [Pseudomonas sp. PAMC 25886]
gi|395799013|ref|ZP_10478295.1| GTP-binding protein Der [Pseudomonas sp. Ag1]
gi|421138866|ref|ZP_15598918.1| GTP-binding protein EngA [Pseudomonas fluorescens BBc6R8]
gi|395336700|gb|EJF68559.1| GTP-binding protein Der [Pseudomonas sp. Ag1]
gi|404510009|gb|EKA23927.1| GTP-binding protein EngA [Pseudomonas fluorescens BBc6R8]
Length = 489
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 278/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+II+DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F +G+G+ I+ +G GI LE I + P
Sbjct: 120 IDNIDPEMARAEFSPMGLGDAIPIAGAHGRGITQMLE-IALRDFPRDDVDEVEGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDYVKVELQRRLFFVEFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVSEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
L+ + Y RYLE
Sbjct: 419 LEKVPKSYVRYLE 431
>gi|262371654|ref|ZP_06064933.1| ribosome-associated GTPase EngA [Acinetobacter junii SH205]
gi|262311679|gb|EEY92764.1| ribosome-associated GTPase EngA [Acinetobacter junii SH205]
Length = 469
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 287/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDSY-MAEQSKTAIHEADIIIFVVDARAGLLASDEQIARELRTLGKKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE +L E+P + E H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEEVLA-EVP------EDENPEEHN 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+SS +
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESSNLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILNDATEAHQPPSIGGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|238897953|ref|YP_002923633.1| GTP-binding protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259645880|sp|C4K4J2.1|DER_HAMD5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|229465711|gb|ACQ67485.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 496
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 283/445 (63%), Gaps = 27/445 (6%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P++ L+GRPNVGKST FNRLT + +ALVA++PGLTRDR YG I FIIIDTGG
Sbjct: 1 MIPIIALIGRPNVGKSTFFNRLTQTANALVADFPGLTRDRQYGHAEIENHKFIIIDTGGI 60
Query: 61 EP-EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E + I MT Q+ AI E+D+++FI+D R GL+ D I LRK + LV N
Sbjct: 61 NGIEGIENIQKHMTHQSFLAIEEADVVLFILDARAGLLPADLEIAKHLRKRKKATFLVAN 120
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKF---------- 168
K + +NS +L DFY L +G + I+A +G G+ + +++T +P K
Sbjct: 121 KIDGMNSDTALTDFYSLALGKVYGIAASHGRGVAQLMSSVITPFVPEKPIIELSEEELNS 180
Query: 169 -FKKKEFTNIHSIEY--------------IKVAIVGKPNVGKSTLINSLLGENRVITYDT 213
+ +K+ T + ++ IK+AIVG+PNVGKSTL+N +L ++R++ YD
Sbjct: 181 SYWEKQKTEVDKTDFLESKKFLCNPESLPIKLAIVGRPNVGKSTLVNHILAQDRMLVYDI 240
Query: 214 PGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLD 273
PGTTRDSI NN++YI IDTAG+R+ K E +E+FSVIKTLK+I ANVV+L++D
Sbjct: 241 PGTTRDSIYIPLIRNNREYIFIDTAGVRKSAKIKEKVERFSVIKTLKAIENANVVLLVID 300
Query: 274 AQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFI 333
A + +S QD+++ +FI SGRSL++ VNKWD+I +RK IKN++ +L F+ FA +FI
Sbjct: 301 ANEGVSDQDLSLLSFILNSGRSLVITVNKWDAISSEKRKQIKNSLDLRLGFMDFARTHFI 360
Query: 334 SAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQG 393
SA+ + + + +SI YD S ++TS +TR + A + H P + R KL+YAH G
Sbjct: 361 SALHGSGVENLFKSIKEAYDCSTKRINTSLLTRIMQLAKEEHEPPLVRGRRVKLKYAHSG 420
Query: 394 GKNPPIIVIHGNRLKYIGNDYKRYL 418
G NP I+VIHGN++ I + YKRYL
Sbjct: 421 GYNPLIVVIHGNQVTAINDSYKRYL 445
>gi|71735846|ref|YP_273582.1| GTP-binding protein EngA [Pseudomonas syringae pv. phaseolicola
1448A]
gi|257487194|ref|ZP_05641235.1| GTP-binding protein EngA [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|416018168|ref|ZP_11565162.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str.
B076]
gi|416025552|ref|ZP_11569286.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str.
race 4]
gi|422594711|ref|ZP_16669001.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|422679842|ref|ZP_16738115.1| GTP-binding protein Der [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|123637657|sp|Q48LZ0.1|DER_PSE14 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71556399|gb|AAZ35610.1| GTP-binding protein engA [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320322917|gb|EFW79007.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str.
B076]
gi|320329960|gb|EFW85948.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330985018|gb|EGH83121.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331009189|gb|EGH89245.1| GTP-binding protein Der [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 490
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 278/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ +++ +F +G+G+ ++ +G GI LE I E P
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEEVEEV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|422297384|ref|ZP_16385022.1| GTP-binding protein EngA [Pseudomonas avellanae BPIC 631]
gi|407991213|gb|EKG33117.1| GTP-binding protein EngA [Pseudomonas avellanae BPIC 631]
Length = 489
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/433 (43%), Positives = 278/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFF---------- 169
+NI+ +++ +F +G+G+ ++ +G GI LE I E P +
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEVEEVA 178
Query: 170 ---KKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
+ E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + + +
Sbjct: 299 GYALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLYQ 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 VEKVPKSYVRYLE 431
>gi|350421258|ref|XP_003492787.1| PREDICTED: hypothetical protein LOC100748976 [Bombus impatiens]
Length = 1520
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 191/423 (45%), Positives = 282/423 (66%), Gaps = 21/423 (4%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
V LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG+ +I +I+IDTGG +
Sbjct: 1020 VAALVGRPNVGKSTLFNRLTKTRDALVADFPGLTRDRKYGKAHIQGHEYIVIDTGGIDGS 1079
Query: 64 VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSEN 123
++G+ + M +Q+ AI E+DI++F+VD R GL+ D I LR +P LV NK++
Sbjct: 1080 -EEGVENHMAEQSLLAIEEADIVLFMVDARAGLLPADYAIAQHLRSRQKPTFLVANKTDG 1138
Query: 124 INS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY 182
+++ S++ +FYELG+G + I+A +G G+ ++++LT + ++ ++ Y
Sbjct: 1139 LDADSVTGEFYELGLGEVYPIAASHGRGVTALIDHVLTPIFGLDRVDDEQITDTLYDGVY 1198
Query: 183 -------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKS 223
IKVAIVG+PNVGKSTL N +LGE+RV+ YD PGTTRDSI
Sbjct: 1199 VQPSDEALAEEQQALADLPIKVAIVGRPNVGKSTLTNRILGEDRVVVYDMPGTTRDSIYI 1258
Query: 224 LFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDI 283
E + ++Y+LIDTAG+R+R K E +EKFSVIKTL++I +ANVV+L++DA++ +S QD+
Sbjct: 1259 PMERDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDAREGLSDQDL 1318
Query: 284 NIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINS 343
++ FI SGRSL+V VNKWD + ++ +K+ + ++L+F+ FA +FISA+ + + +
Sbjct: 1319 SLLGFIINSGRSLVVVVNKWDGLSLEVKENVKSVLDERLDFVDFARIHFISALHGSGVGN 1378
Query: 344 FMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIH 403
ESI YD + +STS +T+ + A +H P + R KL+YAH GG NPPI+VIH
Sbjct: 1379 LFESIIEAYDCATKRVSTSLLTKIMHMAQDDHQPPLVRGRRVKLKYAHAGGYNPPIVVIH 1438
Query: 404 GNR 406
GN+
Sbjct: 1439 GNQ 1441
>gi|398858736|ref|ZP_10614423.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM79]
gi|398238463|gb|EJN24190.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM79]
Length = 489
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 279/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDEEPEEGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|398841612|ref|ZP_10598823.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM102]
gi|398107925|gb|EJL97915.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM102]
Length = 489
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 279/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDEEQEEGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|169634401|ref|YP_001708137.1| GTP-binding protein EngA [Acinetobacter baumannii SDF]
gi|254783130|sp|B0VKR4.1|DER_ACIBS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169153193|emb|CAP02283.1| putative GTP-binding protein EngA [Acinetobacter baumannii]
Length = 469
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ I LV NK
Sbjct: 61 GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L ++P + E H
Sbjct: 120 VDGVHAEAALVEFYKLGLGEPLQVAASHGRGVQQMLEDVLQ-DIP------EDENPEEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWARIHLISALHGTGVGELYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A H P + R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILNDATDQHQPPTVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|289626149|ref|ZP_06459103.1| GTP-binding protein EngA [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289649055|ref|ZP_06480398.1| GTP-binding protein EngA [Pseudomonas syringae pv. aesculi str.
2250]
gi|422584765|ref|ZP_16659866.1| GTP-binding protein Der [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|298159504|gb|EFI00551.1| GTP-binding protein EngA [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330869573|gb|EGH04282.1| GTP-binding protein Der [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 490
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 278/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ +++ +F +G+G+ ++ +G GI LE I E P
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEEVEEV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|169797239|ref|YP_001715032.1| GTP-binding protein EngA [Acinetobacter baumannii AYE]
gi|184156836|ref|YP_001845175.1| GTP-binding protein EngA [Acinetobacter baumannii ACICU]
gi|215484680|ref|YP_002326915.1| small GTP-binding domain protein [Acinetobacter baumannii
AB307-0294]
gi|260556121|ref|ZP_05828340.1| ribosome-associated GTPase EngA [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|301509976|ref|ZP_07235213.1| GTP-binding protein EngA [Acinetobacter baumannii AB058]
gi|332851256|ref|ZP_08433329.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6013150]
gi|332866125|ref|ZP_08436840.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6013113]
gi|332873250|ref|ZP_08441207.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6014059]
gi|384130507|ref|YP_005513119.1| engA [Acinetobacter baumannii 1656-2]
gi|384141793|ref|YP_005524503.1| putative GTP-binding protein EngA [Acinetobacter baumannii
MDR-ZJ06]
gi|385236104|ref|YP_005797443.1| GTP-binding protein EngA [Acinetobacter baumannii TCDC-AB0715]
gi|387125250|ref|YP_006291132.1| ribosome-associated GTPase EngA [Acinetobacter baumannii MDR-TJ]
gi|403673367|ref|ZP_10935664.1| GTP-binding protein Der [Acinetobacter sp. NCTC 10304]
gi|407931440|ref|YP_006847083.1| ribosome-associated GTPase EngA [Acinetobacter baumannii TYTH-1]
gi|416146612|ref|ZP_11601275.1| GTP-binding protein EngA [Acinetobacter baumannii AB210]
gi|417545870|ref|ZP_12196956.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC032]
gi|417548471|ref|ZP_12199552.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-18]
gi|417566609|ref|ZP_12217481.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC143]
gi|417570291|ref|ZP_12221148.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC189]
gi|417577482|ref|ZP_12228327.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-17]
gi|417871149|ref|ZP_12516092.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH1]
gi|417875812|ref|ZP_12520615.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH2]
gi|417879690|ref|ZP_12524247.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH3]
gi|417882146|ref|ZP_12526454.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH4]
gi|421201852|ref|ZP_15659007.1| GTP-binding protein EngA [Acinetobacter baumannii AC12]
gi|421535222|ref|ZP_15981484.1| GTP-binding protein EngA [Acinetobacter baumannii AC30]
gi|421620710|ref|ZP_16061639.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC074]
gi|421625679|ref|ZP_16066525.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC098]
gi|421630804|ref|ZP_16071505.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC180]
gi|421642861|ref|ZP_16083372.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-235]
gi|421649194|ref|ZP_16089589.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-251]
gi|421651028|ref|ZP_16091400.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC0162]
gi|421655157|ref|ZP_16095481.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-72]
gi|421659239|ref|ZP_16099460.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-83]
gi|421662384|ref|ZP_16102552.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC110]
gi|421666261|ref|ZP_16106353.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC087]
gi|421670862|ref|ZP_16110844.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC099]
gi|421675908|ref|ZP_16115827.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC065]
gi|421688323|ref|ZP_16128023.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-143]
gi|421692427|ref|ZP_16132078.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-116]
gi|421694075|ref|ZP_16133707.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-692]
gi|421698071|ref|ZP_16137615.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-58]
gi|421702240|ref|ZP_16141725.1| GTP-binding protein Der [Acinetobacter baumannii ZWS1122]
gi|421705979|ref|ZP_16145400.1| GTP-binding protein Der [Acinetobacter baumannii ZWS1219]
gi|421789309|ref|ZP_16225571.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-82]
gi|421792398|ref|ZP_16228553.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-2]
gi|421798254|ref|ZP_16234279.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-21]
gi|421807834|ref|ZP_16243691.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC035]
gi|424053737|ref|ZP_17791268.1| GTPase Der [Acinetobacter baumannii Ab11111]
gi|424061181|ref|ZP_17798671.1| GTPase Der [Acinetobacter baumannii Ab33333]
gi|424064672|ref|ZP_17802156.1| GTPase Der [Acinetobacter baumannii Ab44444]
gi|425749357|ref|ZP_18867337.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-348]
gi|425751504|ref|ZP_18869449.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-113]
gi|445400091|ref|ZP_21429741.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-57]
gi|445446821|ref|ZP_21443452.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-A-92]
gi|445458183|ref|ZP_21447007.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC047]
gi|445465113|ref|ZP_21449891.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC338]
gi|445481615|ref|ZP_21456059.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-78]
gi|445486344|ref|ZP_21457402.1| ribosome-associated GTPase EngA [Acinetobacter baumannii AA-014]
gi|254783127|sp|B7H065.1|DER_ACIB3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783129|sp|B2I3F0.1|DER_ACIBC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783131|sp|B0V4V6.1|DER_ACIBY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783285|sp|A3M215.2|DER_ACIBT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169150166|emb|CAM88060.1| putative GTP-binding protein EngA [Acinetobacter baumannii AYE]
gi|183208430|gb|ACC55828.1| predicted GTPase [Acinetobacter baumannii ACICU]
gi|193076314|gb|ABO10959.2| putative GTP-binding protein EngA [Acinetobacter baumannii ATCC
17978]
gi|213986103|gb|ACJ56402.1| small GTP-binding domain protein [Acinetobacter baumannii
AB307-0294]
gi|260410176|gb|EEX03475.1| ribosome-associated GTPase EngA [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|322506727|gb|ADX02181.1| engA [Acinetobacter baumannii 1656-2]
gi|323516601|gb|ADX90982.1| GTP-binding protein EngA [Acinetobacter baumannii TCDC-AB0715]
gi|332730136|gb|EGJ61463.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6013150]
gi|332734766|gb|EGJ65860.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6013113]
gi|332738762|gb|EGJ69632.1| ribosome biogenesis GTPase Der [Acinetobacter baumannii 6014059]
gi|333365993|gb|EGK48007.1| GTP-binding protein EngA [Acinetobacter baumannii AB210]
gi|342224793|gb|EGT89811.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH2]
gi|342225970|gb|EGT90946.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH1]
gi|342227788|gb|EGT92701.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH3]
gi|342238395|gb|EGU02828.1| GTP-binding protein Der [Acinetobacter baumannii ABNIH4]
gi|347592286|gb|AEP05007.1| putative GTP-binding protein EngA [Acinetobacter baumannii
MDR-ZJ06]
gi|385879742|gb|AFI96837.1| ribosome-associated GTPase EngA [Acinetobacter baumannii MDR-TJ]
gi|395550739|gb|EJG16748.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC189]
gi|395552281|gb|EJG18289.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC143]
gi|395570703|gb|EJG31365.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-17]
gi|398328737|gb|EJN44860.1| GTP-binding protein EngA [Acinetobacter baumannii AC12]
gi|400383758|gb|EJP42436.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC032]
gi|400388770|gb|EJP51842.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-18]
gi|404559713|gb|EKA64964.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-116]
gi|404561066|gb|EKA66302.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-143]
gi|404569914|gb|EKA74999.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-692]
gi|404573117|gb|EKA78157.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-58]
gi|404666863|gb|EKB34793.1| GTPase Der [Acinetobacter baumannii Ab33333]
gi|404667223|gb|EKB35144.1| GTPase Der [Acinetobacter baumannii Ab11111]
gi|404672755|gb|EKB40559.1| GTPase Der [Acinetobacter baumannii Ab44444]
gi|407195003|gb|EKE66139.1| GTP-binding protein Der [Acinetobacter baumannii ZWS1122]
gi|407195392|gb|EKE66526.1| GTP-binding protein Der [Acinetobacter baumannii ZWS1219]
gi|407900021|gb|AFU36852.1| ribosome-associated GTPase EngA [Acinetobacter baumannii TYTH-1]
gi|408509040|gb|EKK10716.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC0162]
gi|408509294|gb|EKK10969.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-72]
gi|408511427|gb|EKK13075.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-235]
gi|408513967|gb|EKK15579.1| ribosome-associated GTPase EngA [Acinetobacter baumannii IS-251]
gi|408697190|gb|EKL42710.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC180]
gi|408697773|gb|EKL43279.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC098]
gi|408699987|gb|EKL45459.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC074]
gi|408707950|gb|EKL53228.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-83]
gi|408715187|gb|EKL60317.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC110]
gi|409986775|gb|EKO42966.1| GTP-binding protein EngA [Acinetobacter baumannii AC30]
gi|410381425|gb|EKP33991.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC065]
gi|410383159|gb|EKP35692.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC099]
gi|410388186|gb|EKP40625.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC087]
gi|410394840|gb|EKP47164.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-21]
gi|410399239|gb|EKP51436.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-82]
gi|410400705|gb|EKP52873.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-2]
gi|410416013|gb|EKP67788.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC035]
gi|425489430|gb|EKU55742.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-348]
gi|425499951|gb|EKU65979.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-113]
gi|444759763|gb|ELW84225.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-A-92]
gi|444769829|gb|ELW93997.1| ribosome-associated GTPase EngA [Acinetobacter baumannii AA-014]
gi|444770407|gb|ELW94564.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-78]
gi|444775827|gb|ELW99883.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC047]
gi|444779245|gb|ELX03239.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC338]
gi|444783473|gb|ELX07332.1| ribosome-associated GTPase EngA [Acinetobacter baumannii Naval-57]
gi|452955788|gb|EME61185.1| GTP-binding protein Der [Acinetobacter baumannii MSP4-16]
Length = 469
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ I LV NK
Sbjct: 61 GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L ++P + E H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLQ-DIP------EDENPEEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWARIHLISALHGTGVGELYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A H P + R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILNDATDQHQPPTVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|422608871|ref|ZP_16680830.1| GTP-binding protein Der [Pseudomonas syringae pv. mori str. 301020]
gi|330894498|gb|EGH27159.1| GTP-binding protein Der [Pseudomonas syringae pv. mori str. 301020]
Length = 490
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 278/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIKEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ +++ +F +G+G+ ++ +G GI LE I E P
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPKDEDELEEGEEVEEV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|302185741|ref|ZP_07262414.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae 642]
gi|422638388|ref|ZP_16701819.1| GTP-binding protein Der [Pseudomonas syringae Cit 7]
gi|440744290|ref|ZP_20923594.1| GTP-binding protein Der [Pseudomonas syringae BRIP39023]
gi|330950783|gb|EGH51043.1| GTP-binding protein Der [Pseudomonas syringae Cit 7]
gi|440374304|gb|ELQ11040.1| GTP-binding protein Der [Pseudomonas syringae BRIP39023]
Length = 490
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 278/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ +++ +F +G+G+ ++ +G GI LE I E P
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPRDEDEPEEGVEVEEV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|399003833|ref|ZP_10706482.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM18]
gi|398121577|gb|EJM11200.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM18]
Length = 489
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 279/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDEEEPEEGEEEVVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|66044500|ref|YP_234341.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae B728a]
gi|81308464|sp|Q4ZX19.1|DER_PSEU2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|63255207|gb|AAY36303.1| Small GTP-binding protein protein domain:GTP-binding protein
[Pseudomonas syringae pv. syringae B728a]
Length = 490
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 278/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ +++ +F +G+G+ ++ +G GI LE I E P
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPRDEDEPEEGVEVEEV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|121997392|ref|YP_001002179.1| GTP-binding protein EngA [Halorhodospira halophila SL1]
gi|166198720|sp|A1WUL5.1|DER_HALHL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|121588797|gb|ABM61377.1| small GTP-binding protein [Halorhodospira halophila SL1]
Length = 472
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/422 (43%), Positives = 273/422 (64%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M V+ LVGRPNVGKSTLFNRLT SRDALVA++PGLTRDR YG +++DTGG
Sbjct: 1 MSAVIALVGRPNVGKSTLFNRLTGSRDALVADHPGLTRDRQYGIVRHQGGHAVVVDTGGM 60
Query: 61 EPEVKK--GIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
E++ G MHE Q + AI +D ++F+VDG+ G D+ I LR++ P+ L +
Sbjct: 61 GEELEGVGGCMHE---QARAAIAGADAVVFLVDGQAGATVGDEEIAAELRRAQVPVFLAV 117
Query: 119 NKSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
NK++ +++ ++ DF+ LG+ H I+A G G+ L+ + + P + +
Sbjct: 118 NKTDGLDAGVAAADFHGLGLQPVHAIAATRGRGVGELLDAVFALLPP-----AEPDAVGS 172
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
I VA++G+PNVGKSTL+N LLGE RV+ YD PGTTRDSI FE + + Y LIDT
Sbjct: 173 DGPGGIPVAMIGRPNVGKSTLVNRLLGEERVVVYDEPGTTRDSIAVPFERDGQHYTLIDT 232
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RRR + E +EKFSV+KTL++I A+VV+L+ DAQ+ I+ QD ++A + ++GR+L+
Sbjct: 233 AGVRRRARVQETVEKFSVVKTLEAIERASVVMLVTDAQEGITEQDAHLAGHVLQAGRALV 292
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ +NKWD + +QR+ ++ ++ + FL FA +F+SA+ + + +ES+ + ++
Sbjct: 293 LVINKWDGLDPDQRRKVRRDLDLRFAFLGFARHHFVSALHGSGVGLLLESVERAHAAAHR 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
L+T + AL A+ NH P + R KLRYAHQGG NPP+IVIHGN+++ + Y RY
Sbjct: 353 DLATPELNDALQEALANHQPPLSRGRRIKLRYAHQGGHNPPVIVIHGNQVQRLPRAYMRY 412
Query: 418 LE 419
LE
Sbjct: 413 LE 414
>gi|443645098|ref|ZP_21128948.1| Ribosome-associated GTPase EngA (YfgK/Der) [Pseudomonas syringae
pv. syringae B64]
gi|443285115|gb|ELS44120.1| Ribosome-associated GTPase EngA (YfgK/Der) [Pseudomonas syringae
pv. syringae B64]
Length = 490
Score = 370 bits (949), Expect = e-99, Method: Compositional matrix adjust.
Identities = 187/434 (43%), Positives = 278/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
+NI+ +++ +F +G+G+ ++ +G GI L +I E P +
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQML-DIALREFPRDEDELEEGAEVEEV 178
Query: 168 --FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|395649903|ref|ZP_10437753.1| GTP-binding protein Der [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 489
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/433 (43%), Positives = 279/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+II+DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F +G+G+ I+ +G GI LE L+ + P
Sbjct: 120 IDNIDPEMARAEFSPMGLGDAIPIAGAHGRGITQMLEIALS-DFPKDDAEEEEGEEEVVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|352082093|ref|ZP_08952916.1| ribosome-associated GTPase EngA [Rhodanobacter sp. 2APBS1]
gi|389796718|ref|ZP_10199769.1| GTP-binding protein Der [Rhodanobacter sp. 116-2]
gi|351682231|gb|EHA65337.1| ribosome-associated GTPase EngA [Rhodanobacter sp. 2APBS1]
gi|388448243|gb|EIM04228.1| GTP-binding protein Der [Rhodanobacter sp. 116-2]
Length = 467
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/424 (44%), Positives = 272/424 (64%), Gaps = 14/424 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN LT SRDALVA+ PG+TRDRHYG G++ F+++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNVLTRSRDALVADMPGVTRDRHYGICRTGERPFVVVDTGGL 60
Query: 61 EPEVKKGIMHEM----TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVL 116
GI M +Q + AI E+D+++F+VD R GL+ QD I LR+SG+PIV
Sbjct: 61 S-----GIDEAMDVLTARQVRLAIAEADVLVFVVDARDGLLPQDDAILAELRRSGKPIVA 115
Query: 117 VINKSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFT 175
+NK++ ++ ++ +F+ GIG +SA + G +FL +L + LP + +
Sbjct: 116 AVNKTDGLDEQAVMAEFFAFGIGATLPLSAAHNRGTDDFLRVLLPL-LPADREAAAEAEG 174
Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
SI +VAIVG+PN GKSTLIN LLGE R+I D GTTRD I+ E + K+Y LI
Sbjct: 175 EDGSI---RVAIVGRPNAGKSTLINRLLGEERLIVSDVAGTTRDPIRVPLERDGKRYTLI 231
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAGIRR+ + E +EKFSVIKTL+SI A VV++++DA++N++ QD+ + + + GR+
Sbjct: 232 DTAGIRRKARVEEAVEKFSVIKTLQSIAAAQVVVVMIDARENLADQDLTLIGYAIDEGRA 291
Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
L++ +NKWD + QR + + ++L F+ +A ISA+ + + M ++ + S+
Sbjct: 292 LVIAINKWDDMDSYQRDECRRALDRRLVFVDWAKQVQISALHGSGLRELMRAVVRAHASA 351
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
L +S +T+AL A +++ P PKLR+AH GG NPP IVIHG+R K+I Y+
Sbjct: 352 TKELVSSDLTKALEKAYESYQPPLVNGHAPKLRFAHPGGTNPPTIVIHGSRTKHIAPAYQ 411
Query: 416 RYLE 419
RYLE
Sbjct: 412 RYLE 415
>gi|398994135|ref|ZP_10697056.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM21]
gi|398133156|gb|EJM22386.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM21]
Length = 489
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 279/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDEEPEDGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F ESGR+L++ +NKWD + ++R +K ++++L F+ +A +FISA+ + +
Sbjct: 299 GFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|398879590|ref|ZP_10634682.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM67]
gi|398882218|ref|ZP_10637188.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM60]
gi|398196298|gb|EJM83311.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM67]
gi|398199467|gb|EJM86409.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM60]
Length = 489
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 279/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDEEELEEGEEEDVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F ESGR+L++ +NKWD + ++R +K ++++L F+ +A +FISA+ + +
Sbjct: 299 GFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|212212370|ref|YP_002303306.1| GTP-binding protein EngA [Coxiella burnetii CbuG_Q212]
gi|238058972|sp|B6IZN3.1|DER_COXB2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|212010780|gb|ACJ18161.1| GTP-binding protein [Coxiella burnetii CbuG_Q212]
Length = 443
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 195/419 (46%), Positives = 269/419 (64%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGRPNVGKSTLFN LT SR ALVA+ PG+TRDR YGE I + +++DTGG
Sbjct: 1 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
K + Q +QAI ESD I+F+VD + GLV D++I L K G+ I L +NK
Sbjct: 61 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLHKKGKKIFLAVNK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ +++ DFY+LG G P++I+A G G+K+ + +L LP +K +KE
Sbjct: 121 ADRARAAVVQSDFYKLGFGEPYVIAAASGRGVKDLMTQVLE-NLPEEKEVIEKEVG---- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+A++G+PNVGKSTLIN LLGE RVI YD PGTTRDSI F N++ Y LIDTAG
Sbjct: 176 ---IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR K + +EKFS+IK+L+++ A+VVI LLDA+Q ++ QD+ + N I E+G SLI+
Sbjct: 233 IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIA 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNKWD + +R ++N I +++ F+ FA FISA+ + +I Y S L
Sbjct: 293 VNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQEL 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+T ++TRAL A+ H P K R +LRYAH G ++P IV+HG + K + Y RYL
Sbjct: 353 TTGQLTRALEKAVAEHEPPLVKGRRIRLRYAHLGARHPLTIVVHGKKTKSLPQSYSRYL 411
>gi|260549069|ref|ZP_05823290.1| small GTP-binding domain-containing protein [Acinetobacter sp.
RUH2624]
gi|425741719|ref|ZP_18859858.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-487]
gi|445437392|ref|ZP_21441038.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC021]
gi|260407797|gb|EEX01269.1| small GTP-binding domain-containing protein [Acinetobacter sp.
RUH2624]
gi|425491430|gb|EKU57714.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-487]
gi|444753974|gb|ELW78610.1| ribosome-associated GTPase EngA [Acinetobacter baumannii OIFC021]
Length = 469
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ I LV NK
Sbjct: 61 GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE++L ++P + E H
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLQ-DVP------EDENPEEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|389685769|ref|ZP_10177092.1| ribosome-associated GTPase EngA [Pseudomonas chlororaphis O6]
gi|399009197|ref|ZP_10711639.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM17]
gi|425901317|ref|ZP_18877908.1| ribosome-associated GTPase EngA [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|388550111|gb|EIM13381.1| ribosome-associated GTPase EngA [Pseudomonas chlororaphis O6]
gi|397883572|gb|EJL00059.1| ribosome-associated GTPase EngA [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|398113474|gb|EJM03321.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM17]
Length = 490
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 277/434 (63%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +++I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + ++ NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKRNKTSYVIANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ ++ +F LG+G+ I+ +G GI LE I E P
Sbjct: 120 VDNIDPDMARAEFAPLGMGDAIPIAGAHGRGITQMLE-IALREFPKDDADEPEEGEEEVV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMDPRERDYVKTELERRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVNNRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|422671326|ref|ZP_16730692.1| GTP-binding protein Der [Pseudomonas syringae pv. aceris str.
M302273]
gi|330969066|gb|EGH69132.1| GTP-binding protein Der [Pseudomonas syringae pv. aceris str.
M302273]
Length = 490
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 278/434 (64%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ +++ +F +G+G+ ++ +G GI LE I E P
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGGHGRGISQMLE-IALREFPRDEDEPEEGVEVEEV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISAMHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+S+ + + S++ TSR+T+ L A+ H P R KLRYAH GG NPP+IVIHGN
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVGSRRIKLRYAHLGGANPPLIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QVEKVPKSYVRYLE 432
>gi|407363602|ref|ZP_11110134.1| GTP-binding protein Der [Pseudomonas mandelii JR-1]
Length = 489
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 278/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDDEQEEGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F ESGR+L++ +NKWD + ++R +K ++++L F+ +A +FISA+ + +
Sbjct: 299 GFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTTILEDAVSEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|387895479|ref|YP_006325776.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens A506]
gi|388467462|ref|ZP_10141672.1| ribosome-associated GTPase EngA [Pseudomonas synxantha BG33R]
gi|387164469|gb|AFJ59668.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens A506]
gi|388011042|gb|EIK72229.1| ribosome-associated GTPase EngA [Pseudomonas synxantha BG33R]
Length = 489
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 189/433 (43%), Positives = 277/433 (63%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+II+DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + LV NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ + +F +G+G+ ++ +G GI LE I + P
Sbjct: 120 IDNIDPEAARAEFSPMGLGDAIPVAGAHGRGITQMLE-IALRDFPKDDVEEEEGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|386826410|ref|ZP_10113517.1| ribosome-associated GTPase EngA [Beggiatoa alba B18LD]
gi|386427294|gb|EIJ41122.1| ribosome-associated GTPase EngA [Beggiatoa alba B18LD]
Length = 464
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/420 (44%), Positives = 275/420 (65%), Gaps = 10/420 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P + +VGRPNVGKSTLFN LT SRDALVA GLTRDR G G +G +++IDTGG
Sbjct: 1 MLPTIAIVGRPNVGKSTLFNVLTKSRDALVAEQAGLTRDRKVGRGKVGGMPYLVIDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ GI +T+Q QAI E++ ++F+VDGR GL D++I LR P+ LVINK
Sbjct: 61 T-DASDGIATRITQQALQAIQEANKVLFVVDGRDGLTAIDEMIAQRLRSFNIPVHLVINK 119
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+E + S +++DF+ LG H ISA + GI+ +E +L+ +P + + E
Sbjct: 120 TEGMQSELVNIDFHRLGFSPVHTISASHQRGIEAMMETVLSDFSVPEESEMDEAEAG--- 176
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
IK+AIVG+PNVGKSTL+N +LG RVI YD PGTTRDSI FE + +KY LIDTA
Sbjct: 177 ----IKIAIVGRPNVGKSTLVNRILGYERVIAYDQPGTTRDSIFIPFERDGQKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR + +V+EK+SV+K L+++ A+VVI+++DA++ ++ QD ++ + +SGR+LI+
Sbjct: 233 GVRRRARIADVVEKYSVLKALQAVEAAHVVIMIIDAREGMTDQDASLLGNVLDSGRALII 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + +R+ ++ + +KL+F+ FA +FISA+ + +S+N + ++ H
Sbjct: 293 AVNKWDGLTQTEREQVRYTLTRKLHFIDFAEIHFISALHGTGVGHLYKSVNIAWTAAHKH 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + L AI +PP R K+RY HQGG++PP+ VIHG+++ + + Y+RYL
Sbjct: 353 ISTPLLNDVLKDAITRNPPPLSHGRRIKMRYIHQGGQHPPLFVIHGSQVDSVPDAYQRYL 412
>gi|400405781|ref|YP_006588640.1| ribosome-associated GTPase EngA [secondary endosymbiont of
Ctenarytaina eucalypti]
gi|400364144|gb|AFP85212.1| ribosome-associated GTPase EngA [secondary endosymbiont of
Ctenarytaina eucalypti]
Length = 492
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/446 (44%), Positives = 288/446 (64%), Gaps = 34/446 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGR NVGKSTLFNRLT + DALVA++PGLTRDR+YG FI+IDTGG
Sbjct: 1 MLPVIALVGRQNVGKSTLFNRLTRTHDALVADFPGLTRDRNYGHAKWAGNEFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + ++G+ + Q+ AI E+DI++F+VDGR G++ D++I LR+ + +LV+NK
Sbjct: 61 DGK-EEGVEIHVAGQSLSAIEEADIVLFMVDGRAGMMAGDQVIAKHLRRRQKTTLLVVNK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
++ I+ SI DFY LG+ + I+A G GI + LE ++ LP++K
Sbjct: 120 TDGIHIDSIVGDFYSLGLAHIVPIAASQGQGISSLLEQVI---LPFQKNNLLADEAGEDA 176
Query: 168 -----------FFKKKEFTNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTP 214
K+KE T + IK+AIVG+PNVGKSTLIN +LGE RV+ YD P
Sbjct: 177 HSPWPEDAAEALPKEKEQTQHFNPRMLPIKLAIVGRPNVGKSTLINRILGEQRVVVYDMP 236
Query: 215 GTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDA 274
GTTRDS+ + +KYILIDTAG+R+R + E ++KFS+IKTLK+I +ANVV+LL+DA
Sbjct: 237 GTTRDSLYIPMVHKTQKYILIDTAGVRKRGQVTETVDKFSIIKTLKAIGDANVVLLLIDA 296
Query: 275 QQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFIS 334
I+ QD+++ +FI GRSL++ VNKWD + +N R IK + ++L F+ FA ++IS
Sbjct: 297 LVGIADQDLSLLSFILNRGRSLVIAVNKWDDLSNNTRNNIKKVLDQRLGFIDFARVHYIS 356
Query: 335 AIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPP--CRKKLIRPKLRYAHQ 392
A+ + + +ES+N Y + +S + +TR + A+ H P R + I+PK YAH
Sbjct: 357 ALHGSGVEYLLESVNAAYQCATTRVSAALLTRIMCMAVGEHQPPLVRGRRIKPK--YAHP 414
Query: 393 GGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPP+IVIHG+++ + + YK+YL
Sbjct: 415 GGYNPPLIVIHGSQVNDLPHSYKKYL 440
>gi|229592437|ref|YP_002874556.1| GTP-binding protein EngA [Pseudomonas fluorescens SBW25]
gi|229364303|emb|CAY52040.1| GTP-binding protein [Pseudomonas fluorescens SBW25]
Length = 493
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 189/432 (43%), Positives = 277/432 (64%), Gaps = 14/432 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+II+DTGG
Sbjct: 5 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 64
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + LV NK
Sbjct: 65 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLVANK 123
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTI------------ELPYKK 167
+NI+ + +F +G+G+ ++ +G GI LE L+ E +
Sbjct: 124 IDNIDPEQARAEFSPMGLGDAIPVAGAHGRGITQMLEIALSTFPKDDDEEEEGEEEIVAE 183
Query: 168 FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY 227
+ K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 184 GEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFER 243
Query: 228 NNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIAN 287
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 244 NDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLG 303
Query: 288 FIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMES 347
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + + S
Sbjct: 304 FALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYAS 363
Query: 348 INHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRL 407
+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN++
Sbjct: 364 VQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQI 423
Query: 408 KYIGNDYKRYLE 419
+ + Y RYLE
Sbjct: 424 EKVPKSYVRYLE 435
>gi|425745652|ref|ZP_18863695.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-323]
gi|425488090|gb|EKU54430.1| ribosome-associated GTPase EngA [Acinetobacter baumannii WC-323]
Length = 469
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/421 (43%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DII+F+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDSY-MAEQSKTAIHEADIIVFVVDARAGLLASDEQIARELRTLGKKVHLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE +L E+P + E + H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEEVLA-EVP------EDENPDEHN 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI +E + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRQYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|359430006|ref|ZP_09221022.1| GTPase Der [Acinetobacter sp. NBRC 100985]
gi|358234560|dbj|GAB02561.1| GTPase Der [Acinetobacter sp. NBRC 100985]
Length = 469
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/421 (43%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DII+F+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GESEGGIDSY-MAEQSKTAIHEADIIVFVVDARAGLLASDEQIARELRTLGKKVHLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE +L E+P + E + H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEEVLA-EVP------EDENPDEHN 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI +E + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRQYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|402756868|ref|ZP_10859124.1| GTP-binding protein Der [Acinetobacter sp. NCTC 7422]
Length = 469
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/421 (43%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DII+F+VD R GL+ D+ I LR G+ + LV NK
Sbjct: 61 GENEGGIDSY-MAEQSKTAIHEADIIVFVVDARAGLLASDEQIARELRTLGKKVHLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +FY+LG+G P ++A +G G++ LE +L E+P + E + H+
Sbjct: 120 VDGVHAEAALVEFYKLGMGEPMQVAASHGRGVQQMLEEVLA-EVP------EDENPDEHN 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI +E + ++Y LIDTA
Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPYERDGRQYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|408480044|ref|ZP_11186263.1| GTP-binding protein Der [Pseudomonas sp. R81]
Length = 489
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 189/433 (43%), Positives = 277/433 (63%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+II+DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F +G+G+ I+ +G GI LE L+ P
Sbjct: 120 IDNIDPELARAEFSPMGLGDAIPIAGAHGRGITQMLEIALS-SFPKDNAEEEEGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|398937809|ref|ZP_10667475.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM41(2012)]
gi|398166577|gb|EJM54671.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM41(2012)]
Length = 489
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 278/433 (64%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ ++ +F LG+G+ I+ +G GI LE L+ + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQMLEIALS-DFPKDDDELEEGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F ESGR+L++ +NKWD + ++R +K ++++L F+ +A +FISA+ + +
Sbjct: 299 GFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTTILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|423693442|ref|ZP_17667962.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens SS101]
gi|387998485|gb|EIK59814.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens SS101]
Length = 489
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 189/433 (43%), Positives = 276/433 (63%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+II+DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + LV NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ + +F +G+G+ ++ +G GI LE I + P
Sbjct: 120 IDNIDPEAARAEFSPMGLGDAIPVAGAHGRGITQMLE-IALRDFPKDDVEEEEGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|312962901|ref|ZP_07777388.1| GTP-binding protein EngA [Pseudomonas fluorescens WH6]
gi|311282928|gb|EFQ61522.1| GTP-binding protein EngA [Pseudomonas fluorescens WH6]
Length = 489
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 189/433 (43%), Positives = 277/433 (63%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+II+DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + L+ NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLIANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ + +F +G+G+ I+ +G GI LE L + P
Sbjct: 120 IDNIDPEQARAEFSPMGLGDAIPIAGAHGRGITQMLEVALR-DFPKDDAEEEEGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N++KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNDEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|440741236|ref|ZP_20920685.1| GTP-binding protein Der [Pseudomonas fluorescens BRIP34879]
gi|447918218|ref|YP_007398786.1| GTP-binding protein Der [Pseudomonas poae RE*1-1-14]
gi|440373217|gb|ELQ09982.1| GTP-binding protein Der [Pseudomonas fluorescens BRIP34879]
gi|445202081|gb|AGE27290.1| GTP-binding protein Der [Pseudomonas poae RE*1-1-14]
Length = 489
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 276/433 (63%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+II+DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + L+ NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYLIANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP-------------YK 166
+NI+ + +F +G+G+ ++ +G GI LE I + P
Sbjct: 120 IDNIDPEAARAEFSPMGLGDAIPVAGAHGRGITQMLE-IALRDFPKDDAEEEEGEEEIVA 178
Query: 167 KFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE 226
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI FE
Sbjct: 179 EGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFE 238
Query: 227 YNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIA 286
N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 RNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298
Query: 287 NFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFME 346
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 GFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISALHGTGVGNLYA 358
Query: 347 SINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNR 406
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN+
Sbjct: 359 SVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQ 418
Query: 407 LKYIGNDYKRYLE 419
++ + Y RYLE
Sbjct: 419 IEKVPKSYVRYLE 431
>gi|424056992|ref|ZP_17794509.1| GTPase Der [Acinetobacter nosocomialis Ab22222]
gi|407440525|gb|EKF47042.1| GTPase Der [Acinetobacter nosocomialis Ab22222]
Length = 469
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 187/421 (44%), Positives = 288/421 (68%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ I LV NK
Sbjct: 61 GESEGGIDNY-MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ +L +F++LG+G P ++A +G G++ LE++L ++P + E H
Sbjct: 120 VDGVHAEAALVEFFKLGMGEPLQVAASHGRGVQQMLEDVLQ-DVP------EDENPEEHD 172
Query: 180 IEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++AI+G+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE +KY LIDTA
Sbjct: 173 KDTGLRLAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMSEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILSDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|398864938|ref|ZP_10620466.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM78]
gi|398244330|gb|EJN29887.1| ribosome-associated GTPase EngA [Pseudomonas sp. GM78]
Length = 490
Score = 366 bits (940), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 188/434 (43%), Positives = 277/434 (63%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +S+I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSHVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ ++ +F LG+G+ I+ +G GI LE I + P
Sbjct: 120 VDNIDPEMARAEFAPLGMGHAIPIAGAHGRGITQLLE-IALGDFPKDEDEPQEGEEEEDV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F ESGR+L++ +NKWD + ++R +K ++++L F+ +A +FISA+ + +
Sbjct: 299 LGFAIESGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDYADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QIEKVPKSYVRYLE 432
>gi|385331238|ref|YP_005885189.1| GTP-binding protein EngA [Marinobacter adhaerens HP15]
gi|311694388|gb|ADP97261.1| GTP-binding protein EngA [Marinobacter adhaerens HP15]
Length = 452
Score = 366 bits (940), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 179/399 (44%), Positives = 270/399 (67%), Gaps = 8/399 (2%)
Query: 22 LTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEMTKQTKQAII 81
+T SRDALVA++PGLTRDR YGEG + FI+IDTGG + ++G+ EM +Q+ QA+
Sbjct: 1 MTRSRDALVADFPGLTRDRKYGEGSYEGQRFIVIDTGGLTGD-EQGLDLEMARQSMQAVE 59
Query: 82 ESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINSSISL-DFYELGIGNP 140
E+DI++F+VDGR GL D+LI + LR+SG+ LV+NK++ + I+ DFY LG +
Sbjct: 60 EADIVLFLVDGRAGLTAGDELIADSLRRSGKQAHLVVNKTDGQDPDIAASDFYSLGFEST 119
Query: 141 HIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLIN 200
+I+A + GI++ LE +L E ++ + + I ++ +VG+PNVGKSTL+N
Sbjct: 120 FLIAASHNRGIRSMLEILLPSEEEREEEDRADRYPGI------RIGVVGRPNVGKSTLVN 173
Query: 201 SLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLK 260
+LGE+RV+ YD PGTTRDS+ +E +Y LIDTAG+RRR EV+EKFS+IKTL+
Sbjct: 174 RMLGEDRVVVYDMPGTTRDSVYIPYERQGSQYTLIDTAGVRRRKNVSEVVEKFSIIKTLQ 233
Query: 261 SILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKK 320
+I +A+VVIL++DA++ + QD+++ F+ ++GRSL++ VNKWD + R +K +++
Sbjct: 234 AIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRSLVIAVNKWDGMDPEDRARVKEQVQR 293
Query: 321 KLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRK 380
+L+FL +A ++ISA+ + + ES+ Y+S++ T+R+T L AI H P
Sbjct: 294 RLDFLDYADKHYISALHGSGVGVMYESVQACYESAMAKWPTNRLTAILQDAIAQHQPPMV 353
Query: 381 KLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
R KLRYAHQGG NPP+IV+HGN++ + YKRYLE
Sbjct: 354 HGRRIKLRYAHQGGSNPPVIVVHGNQVDSLPGAYKRYLE 392
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 18/166 (10%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKK 66
+VGRPNVGKSTL NR+ +V + PG TRD Y + +IDT G +K
Sbjct: 160 VVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSVYIPYERQGSQYTLIDTAGV--RRRK 217
Query: 67 GIMHEMTK----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ + K +T QAI ++ ++I ++D R+GLV+QD + F+ +G+ +V+ +NK +
Sbjct: 218 NVSEVVEKFSIIKTLQAIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRSLVIAVNKWD 277
Query: 123 NINSSI----------SLDFYELGIGNPHIISALYGNGIKNFLENI 158
++ LDF L + H ISAL+G+G+ E++
Sbjct: 278 GMDPEDRARVKEQVQRRLDF--LDYADKHYISALHGSGVGVMYESV 321
>gi|161349970|ref|YP_045311.2| GTP-binding protein EngA [Acinetobacter sp. ADP1]
Length = 469
Score = 366 bits (940), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 185/421 (43%), Positives = 286/421 (67%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 1 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I +R G+ + LV NK
Sbjct: 61 GEGEAGIDAY-MAEQSKTAIHEADIIIFVVDARAGLLASDEQIAREIRSLGKKVYLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ ++ +FY+LG G P ++A +G G+ LE++L +++P + E H
Sbjct: 120 VDGVHAEAAVVEFYKLGFGEPLHVAASHGRGVAQMLEDVL-VDVP------EDENPEDHD 172
Query: 180 -IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE + ++Y LIDTA
Sbjct: 173 KATGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFSV+KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 233 GVRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 293 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 353 VSPAKLTQILNDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 412
Query: 419 E 419
E
Sbjct: 413 E 413
>gi|49529777|emb|CAG67489.1| putative GTP-binding protein EngA [Acinetobacter sp. ADP1]
Length = 478
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 185/421 (43%), Positives = 286/421 (67%), Gaps = 10/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFN++T SRDALVA++ GLTRDR YG+ KSFI++DTGG
Sbjct: 10 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDAVYQNKSFIVVDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ M +Q+K AI E+DIIIF+VD R GL+ D+ I +R G+ + LV NK
Sbjct: 70 GEGEAGIDAY-MAEQSKTAIHEADIIIFVVDARAGLLASDEQIAREIRSLGKKVYLVANK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +++ ++ +FY+LG G P ++A +G G+ LE++L +++P + E H
Sbjct: 129 VDGVHAEAAVVEFYKLGFGEPLHVAASHGRGVAQMLEDVL-VDVP------EDENPEDHD 181
Query: 180 -IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++AI+G+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE + ++Y LIDTA
Sbjct: 182 KATGLRLAIIGRPNVGKSTLVNRLLGEERVVAFDQPGTTRDSIYIPFERDGRQYTLIDTA 241
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ K E+IEKFSV+KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++
Sbjct: 242 GVRRKGKVDEMIEKFSVVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVI 301
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD++ RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ +
Sbjct: 302 AINKWDNMTEYDRKQCKLDVERRFDFIPWAKIHLISALHGTGVGELYPSIHRAYESANLK 361
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+S +++T+ L A + H P R K+RYAH GG+NPP IVIHGN++ DY+RYL
Sbjct: 362 VSPAKLTQILNDATEAHQPPMISGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYL 421
Query: 419 E 419
E
Sbjct: 422 E 422
>gi|378948963|ref|YP_005206451.1| protein EngA [Pseudomonas fluorescens F113]
gi|423097167|ref|ZP_17084963.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens Q2-87]
gi|359758977|gb|AEV61056.1| EngA [Pseudomonas fluorescens F113]
gi|397884715|gb|EJL01198.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens Q2-87]
Length = 490
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/434 (43%), Positives = 275/434 (63%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +++I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELP--------------Y 165
+NI+ ++ +F LG+G I+ +G GI LE L P
Sbjct: 120 VDNIDPDMARAEFAPLGMGQAIPIAGAHGRGITQMLEIALE-SFPKDDAEEPEDGEEEIV 178
Query: 166 KKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ + K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QIEKVPKSYVRYLE 432
>gi|423695459|ref|ZP_17669949.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens Q8r1-96]
gi|388009632|gb|EIK70883.1| ribosome-associated GTPase EngA [Pseudomonas fluorescens Q8r1-96]
Length = 490
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/434 (43%), Positives = 274/434 (63%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +++I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
+NI+ ++ +F LG+G I+ +G GI LE L P +
Sbjct: 120 VDNIDPDMARAEFAPLGMGQAIPIAGAHGRGITQMLEIALE-SFPKDDVEEPEEGEEEIV 178
Query: 172 ------KEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QIEKVPKSYVRYLE 432
>gi|392950829|ref|ZP_10316384.1| GTPase family protein [Hydrocarboniphaga effusa AP103]
gi|391859791|gb|EIT70319.1| GTPase family protein [Hydrocarboniphaga effusa AP103]
Length = 474
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/426 (45%), Positives = 261/426 (61%), Gaps = 17/426 (3%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI---GK-KSFIIIDTG 58
PVLVLVGRPNVGKSTLFNRLT +RDALVA+Y GLTRDR YG G G+ ++FI++DTG
Sbjct: 6 PVLVLVGRPNVGKSTLFNRLTGTRDALVADYVGLTRDRQYGRGVFEIDGQGRAFIVVDTG 65
Query: 59 GFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
G PE + +Q + A+ E+D I F+ D G D+ I LRK G+P+ L++
Sbjct: 66 GLMPESADPLAVLAEEQAQLALSEADHIFFLTDAIAGRHGSDEAIAAQLRKLGKPLTLLV 125
Query: 119 NKSEN-----INSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKE 173
NK+E DFY LG+G P ISA G+G+ L +L + F E
Sbjct: 126 NKTEGKARGGAKGVAVADFYALGLGEPEPISAENGDGVPGLLRRVL-------EKFPAGE 178
Query: 174 FTNIHSIE-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKY 232
+ + ++VAIVG+PNVGKSTL+N L+G+ RV+ D PGTTRD+I+ FEY Y
Sbjct: 179 PDELAEVPGEVRVAIVGRPNVGKSTLVNRLVGDERVVAADRPGTTRDAIRVPFEYEGNAY 238
Query: 233 ILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYES 292
LIDTAGIRRR++ EVIEKFS++KTL++I A+VVI+++DA ++ QD + + +
Sbjct: 239 TLIDTAGIRRRSRVEEVIEKFSIVKTLQAIESAHVVIVVVDAHADVGEQDARLMGLVAQR 298
Query: 293 GRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVY 352
GR++I+ VNKWD + R+ K + K+ FL F ++ISA + + M + Y
Sbjct: 299 GRAMILAVNKWDGLDPGDREQTKYKVGLKMPFLDFTPVHYISAKHGSGVGVVMRDVKTAY 358
Query: 353 DSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGN 412
DS++ L T +TR L ++ H P R KLRYAHQGG NPP IVIHGN+ +
Sbjct: 359 DSTMKDLPTPELTRILERSVDRHAPPAVLGRRIKLRYAHQGGSNPPQIVIHGNQTDKLPV 418
Query: 413 DYKRYL 418
YKRYL
Sbjct: 419 TYKRYL 424
>gi|330807651|ref|YP_004352113.1| GTP-binding protein engA [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375759|gb|AEA67109.1| GTP-binding protein engA [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 490
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 186/434 (42%), Positives = 274/434 (63%), Gaps = 17/434 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDA+V + GLTRDR YGE +++I++DTGG
Sbjct: 1 MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD + G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK-------- 171
+NI+ ++ +F LG+G I+ +G GI L+ L P +
Sbjct: 120 VDNIDPDMARAEFAPLGMGQAIPIAGAHGRGITQMLKIALE-SFPKDDVEEPEEGEEEIV 178
Query: 172 ------KEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + ++R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIAINKWDGMTPSERDFVKIELQRRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
S+ + + S++ T+R+T+ L A+ H P R KLRYAH GG NPPIIVIHGN
Sbjct: 359 ASVQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGN 418
Query: 406 RLKYIGNDYKRYLE 419
+++ + Y RYLE
Sbjct: 419 QIEKVPKSYVRYLE 432
>gi|389752497|ref|ZP_10191176.1| GTP-binding protein Der [Rhodanobacter sp. 115]
gi|388432964|gb|EIL89946.1| GTP-binding protein Der [Rhodanobacter sp. 115]
Length = 466
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 180/421 (42%), Positives = 276/421 (65%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGK-KSFIIIDTGG 59
M PV+ LVGRPNVGKSTLFN LT SRDALVA+ PG+TRDRHYG + + F+++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNVLTRSRDALVADMPGVTRDRHYGICRTNEERPFVVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ G+ +Q + AI E+ +++F+VD R GL+ QD+ I + LR+SG+PI+ +N
Sbjct: 61 LS-GIDDGLDGLTARQVRLAIEEAQVLVFVVDARDGLLPQDRTILDELRRSGKPIIAAVN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K++ ++ +L +F GI +SA + G ++ ++ +L + LP + +++ +
Sbjct: 120 KTDGLDEETALAEFAVFGIAATLPLSAAHNRGTEDLVDMLLPL-LPAEPDEAEEQVED-- 176
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I+VAIVG+PN GKSTLIN LLGE+R+I D GTTRD I+ E + K+Y LIDTA
Sbjct: 177 --GSIRVAIVGRPNAGKSTLINRLLGEDRLIVSDVAGTTRDPIRVPLERDGKRYTLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+ + E +EKFSVIKTL+SI A VV++++DA++N++ QD+ + E GR+L++
Sbjct: 235 GVRRKARVEEAVEKFSVIKTLQSIAAAQVVVIMIDARENLADQDLTLIGHAMEEGRALVI 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + QR+ + + ++L F+ +A +ISA+ + + M ++ + S+
Sbjct: 295 AVNKWDGLDAYQREQCQRALDRRLVFVDWAKQVYISALHGSGLRELMRAVMRAHASATKE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
L++S +TR L A +++ P + PKLR+AH GG NPP +VIHG+R K+I Y+RYL
Sbjct: 355 LNSSDLTRTLEKAYESYQPPLVRGHAPKLRFAHPGGSNPPTVVIHGSRTKHIAPAYRRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|331005663|ref|ZP_08329030.1| GTP-binding protein EngA [gamma proteobacterium IMCC1989]
gi|330420521|gb|EGG94820.1| GTP-binding protein EngA [gamma proteobacterium IMCC1989]
Length = 482
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/429 (44%), Positives = 273/429 (63%), Gaps = 12/429 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT RDA+VA++ GLTRDR YGE ++ F+ +DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNRLTRRRDAIVADFAGLTRDRQYGEVIWEERRFLFVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ ++GI M +Q+ AI E+D+++F+VD + GL+ D I LR + + +++V NK
Sbjct: 61 SGD-EEGIDSAMAEQSLLAIEEADLVLFMVDCKAGLLPSDIAIAKHLRTTEKKVLIVANK 119
Query: 121 SENINSSISLD-FYELGIGNPHIISALYGNGIKNFLENILTIELPY---------KKFFK 170
+ + + + FYELG+G H +A +G G+ ++ + T LP +
Sbjct: 120 VDGHDPDVVIGPFYELGLGEIHATTATHGRGVNLLMQQVDTC-LPVVIDDVTENITEDVD 178
Query: 171 KKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
E + + IK+AIVG+PNVGKSTL+N +LGE+RV+ YD GTTRDSI +E + K
Sbjct: 179 TTEGEDEEQLAAIKIAIVGRPNVGKSTLVNRMLGEDRVVVYDEAGTTRDSIYINYERHGK 238
Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
Y +IDTAGIRRR +EKFS++KTL+SI +ANVV+LLLDA + + QD+++ +
Sbjct: 239 PYTIIDTAGIRRRKNISLTVEKFSIVKTLQSIEDANVVVLLLDASEGVVDQDLHLMGHVI 298
Query: 291 ESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
ESGR+L+V +NKWD + ++ +K+ ++++L F+ FA +FISA+ + + +SI
Sbjct: 299 ESGRALVVALNKWDGLEAEFKEYVKSELERRLRFVDFADMHFISALHGTGVGNLYKSIEK 358
Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYI 410
+ S+ ST+ +T L A K H P + R KLRYAH GG NPPIIVIHGN+ I
Sbjct: 359 AFASATDRFSTNHLTNVLQMATKEHQPPVVRGHRIKLRYAHAGGHNPPIIVIHGNQTADI 418
Query: 411 GNDYKRYLE 419
Y RYLE
Sbjct: 419 PGHYVRYLE 427
>gi|383317236|ref|YP_005378078.1| ribosome-associated GTPase EngA [Frateuria aurantia DSM 6220]
gi|379044340|gb|AFC86396.1| ribosome-associated GTPase EngA [Frateuria aurantia DSM 6220]
Length = 469
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 273/423 (64%), Gaps = 10/423 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI-GKKSFIIIDTGG 59
M PV+ LVGRPNVGKSTLFN LT SRDALVA+ PG+TRDRHYG + + ++IDTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNVLTRSRDALVADLPGVTRDRHYGVCRLDAARPLMVIDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ G+ +Q + AI ES +++F+VD R GL+ QD+ I + LR+SG+P+++ +N
Sbjct: 61 LSGS-EDGLDGLSARQVRLAIEESQVVVFVVDARDGLLPQDRTIISELRRSGKPLIVGVN 119
Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK--KEFTN 176
K++ ++ ++ +F G+ ++A +G G L ++ + LP + +E +
Sbjct: 120 KTDGLDLDTVMAEFSAFGVAATVPLAAAHGRGSDLLLADVFPL-LPADAYADDGGEEIAD 178
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
I+VAIVG+PN GKSTL+N LLGE+R+I D GTTRD IK E + K++ LID
Sbjct: 179 ----PGIRVAIVGRPNAGKSTLVNRLLGEDRLIVSDVAGTTRDPIKVTLERDGKQFTLID 234
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RRR+K + +EKFSVIKTL+SI A VV++L+DA++N++ QD+ + E GR+L
Sbjct: 235 TAGVRRRSKVEDAVEKFSVIKTLQSIEAAQVVVMLVDARENLADQDLTLIGHTVEQGRAL 294
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
++ +NKWD + QR + + ++L F+ +A FISA+ + + M ++ + ++
Sbjct: 295 VIALNKWDGMDAYQRDQCQQALARRLAFVDWAKIVFISALHGSGMRELMRAVVQAHAAAT 354
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
L+TS +TRAL A +++ P + PKLR+AH GG NPP IV+HG R K+I Y+R
Sbjct: 355 KELNTSELTRALEKAYESYQPPLVRGHAPKLRFAHPGGLNPPTIVLHGTRTKHIAPSYRR 414
Query: 417 YLE 419
YLE
Sbjct: 415 YLE 417
>gi|207743439|ref|YP_002259831.1| gtp-binding protein enga (partial sequence c terminus) [Ralstonia
solanacearum IPO1609]
gi|206594836|emb|CAQ61763.1| putative gtp-binding protein enga (partial sequence c terminus)
[Ralstonia solanacearum IPO1609]
Length = 363
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 168/336 (50%), Positives = 243/336 (72%), Gaps = 4/336 (1%)
Query: 85 IIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENIN-SSISLDFYELGIGNPHII 143
++IFIVDGR GL QD++I ++LRK+G+ I+L +NK+E + ++++ DFYELG+G+P I
Sbjct: 1 MVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNKAEGMKYTAVATDFYELGLGDPRAI 60
Query: 144 SALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLL 203
S+ +G+G+++ ++ L + + + H ++AIVG+PNVGKSTL+N+L+
Sbjct: 61 SSAHGDGVRDLVDEALDQAFSERPELAEAAQAHDHGT---RIAIVGRPNVGKSTLVNALI 117
Query: 204 GENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSIL 263
GE RVI +D PGTTRD+I FE N K Y LIDTAG+R+R K FE IEKFSV+KTL+SI
Sbjct: 118 GEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSIA 177
Query: 264 EANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLN 323
+ANVV+LLLDAQQ+IS QD +IA FI ESGR+L++ VNKWD + + R IK+++++KL
Sbjct: 178 DANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIGVNKWDGLDGHARDRIKHDLERKLQ 237
Query: 324 FLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLI 383
FL+FA ++ISA + I + M+S++ Y ++++ L T ++TR L A++ P R +
Sbjct: 238 FLAFANVHYISAKQRTGIGALMKSVDDAYAAAMVKLPTPKLTRVLQEAVEFQQPRRAGVS 297
Query: 384 RPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
RPKLRYAHQGG NPPI+VIHGN L I Y+R+LE
Sbjct: 298 RPKLRYAHQGGSNPPIVVIHGNALSNIPETYRRFLE 333
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ +VGRPNVGKSTL N L + + PG TRD Y + K + +IDT G
Sbjct: 99 IAIVGRPNVGKSTLVNALIGEERVIAFDMPGTTRDAIYVDFERNGKPYTLIDTAGLR--- 155
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
K+G + E + +T Q+I ++++++ ++D +Q + +QD I F+ +SG+ +V+ +N
Sbjct: 156 KRGKVFEAIEKFSVVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRALVIGVN 215
Query: 120 KSENINS--------SISLDFYELGIGNPHIISALYGNGIKNFLENI------LTIELPY 165
K + ++ + L N H ISA GI ++++ ++LP
Sbjct: 216 KWDGLDGHARDRIKHDLERKLQFLAFANVHYISAKQRTGIGALMKSVDDAYAAAMVKLPT 275
Query: 166 KKFFK 170
K +
Sbjct: 276 PKLTR 280
>gi|374314269|ref|YP_005060698.1| GTP-binding protein [Serratia symbiotica str. 'Cinara cedri']
gi|363988495|gb|AEW44686.1| GTP-binding protein [Serratia symbiotica str. 'Cinara cedri']
Length = 494
Score = 360 bits (925), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 191/447 (42%), Positives = 283/447 (63%), Gaps = 33/447 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M V+ L+GR NVGKSTLFNRLT +RDALVA++PGLTRDR YG + FIIIDT G
Sbjct: 1 MISVVALIGRENVGKSTLFNRLTKTRDALVADFPGLTRDRKYGHAEVKGNEFIIIDTSGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ K G+ M Q+ AI E+DI++FIVD + GL+ D+ + +LR S + L++NK
Sbjct: 61 GSQ-KDGVEMLMESQSFLAIEEADIVLFIVDAQTGLMPADEDLAQYLRVSQKMTCLIVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYK------------- 166
+ ++ I++ +FY LG+ H I+A +G GI+ +++IL LP+
Sbjct: 120 IDGLDPDIAIAEFYSLGLDKVHAIAASHGRGIRQLVDHIL---LPFASIKERAIRFTEED 176
Query: 167 ---KFFKKKEFTNIHSIEY------------IKVAIVGKPNVGKSTLINSLLGENRVITY 211
+ K+ N ++++ IK+ I+G+PNVGKS L N +LGE R++ Y
Sbjct: 177 KSVRLCSKEHDQNFDTVKHYMGVNYNSPDMPIKIVIIGRPNVGKSMLTNRILGEERLVVY 236
Query: 212 DTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILL 271
D PGTTRDSI ++ +KYILIDTAG+R+R K E +EKFS+IKTL++I ++NVV+L+
Sbjct: 237 DMPGTTRDSIYISMVHDKRKYILIDTAGLRKRGKVTETVEKFSIIKTLQAIKDSNVVLLV 296
Query: 272 LDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFN 331
+DA + +S QD+++ FI +SGRS ++ VNKWDSI +R +K+ + +L F++FA
Sbjct: 297 IDAHEGVSDQDLSLLGFILDSGRSFLIIVNKWDSINKEERIHVKDILNLRLGFVNFARVL 356
Query: 332 FISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAH 391
FISA+ + IN+ + + Y + ++TS +T+ + AI HPP R +L+YAH
Sbjct: 357 FISALHGSGINNLFKLVLEAYTCATNRINTSMLTKIMRRAIDAHPPPLTGGRRVQLKYAH 416
Query: 392 QGGKNPPIIVIHGNRLKYIGNDYKRYL 418
GG NPPI+VIHGN++ + N YKRYL
Sbjct: 417 AGGYNPPIVVIHGNQVSDLSNSYKRYL 443
>gi|357403879|ref|YP_004915803.1| GTP-binding protein EngA [Methylomicrobium alcaliphilum 20Z]
gi|351716544|emb|CCE22204.1| GTP-binding protein EngA [Methylomicrobium alcaliphilum 20Z]
Length = 462
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 272/419 (64%), Gaps = 9/419 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN LT SR+ALVA+YPGLTRDR YG G++ +++DTGG
Sbjct: 1 MLPVIALVGRPNVGKSTLFNYLTRSREALVADYPGLTRDRQYGRVKRGQRDCLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + GI KQ + A+ E+D++ FIVD R+GL D+ I LRK +P+VLV+NK
Sbjct: 61 ADDAE-GIDSFAKKQVQVALDEADVVFFIVDAREGLNASDQSIAENLRKLDKPVVLVVNK 119
Query: 121 SENINSSISLDFYELG-IGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++++ + + +G P I+A +G G+ L ++ + E
Sbjct: 120 IDGVDANAAAADFYALALGEPCKIAATHGRGVFELLAHV-------DELLPMAEADEAEI 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I +AIVG+PNVGKSTL+N LLGE RV+ +D PGTTRDSI FE N +K+ LIDTAG
Sbjct: 173 DGGIGIAIVGRPNVGKSTLVNRLLGEERVVVFDEPGTTRDSIYIPFERNGQKFTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR+K +EKFSVIK+L++I +ANVVI L+DA + ++ QD ++ + E+GR+LI+
Sbjct: 233 MRRRSKIALTVEKFSVIKSLQAIEKANVVIYLIDAAEGVTDQDAHLLGLVLEAGRALIIG 292
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + +Q+ +IK + KL+F+ FA + ISA+ + + + ++ +YD+++I +
Sbjct: 293 LNKWDGLGVDQKDLIKRQMDIKLSFVDFAQKHPISALHGSGVGKLFDVVHELYDAAMIDM 352
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
ST +T L A+ H P R KL+YAHQGG+NPP++VIHG + + YKR+L
Sbjct: 353 STPVLTNFLKDAVTTHQPPLVHGRRIKLKYAHQGGRNPPVVVIHGTQTDALPGSYKRFL 411
>gi|365920710|ref|ZP_09445032.1| ribosome biogenesis GTPase Der [Cardiobacterium valvarum F0432]
gi|364577693|gb|EHM54947.1| ribosome biogenesis GTPase Der [Cardiobacterium valvarum F0432]
Length = 455
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/421 (43%), Positives = 272/421 (64%), Gaps = 4/421 (0%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ LVGRPNVGKSTLFN LT SRD+LVA+ PGLTRDR+YGE + IIDTGG
Sbjct: 6 KPLVALVGRPNVGKSTLFNALTRSRDSLVADTPGLTRDRNYGEARLMDMPCRIIDTGGLL 65
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
E ++ I + + +Q + A+ E+D+++F+VDGR GL D+ I LR+S +P++L +NK+
Sbjct: 66 REEEEQIDYRVDQQARAAVSEADVVVFLVDGRDGLTAVDEQIAQELRRSHKPVILAVNKT 125
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTI--ELPYKKFFKKKEFTNIH 178
+ + + L DFY LGI + I+A + GI E IL ELP + F + + +
Sbjct: 126 DFADPDLILADFYALGISDTLAIAAEHRRGINRLAECILARLHELPDAEQFGEPDDVAEN 185
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN-KKYILIDT 237
+ + I +A++G+PN GKSTL+N L+GE R++ GTTRD+I +E + ++ LIDT
Sbjct: 186 ADDGIALAVIGRPNTGKSTLLNRLIGEERLVASPVAGTTRDAIAIPYEDDTGDRFTLIDT 245
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AGIRR+ + + IEKFS++KTL +I ANVVIL+LDA + +S QD ++ I GR LI
Sbjct: 246 AGIRRKARVNDKIEKFSIVKTLDAIERANVVILMLDAHEGVSEQDAHLLGEITRRGRGLI 305
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ +NKWD + QR+ I+ +KL+F+ +A +ISA+ +NI + ++ VY S++
Sbjct: 306 IAINKWDHLDAEQRETIRQQFTRKLHFVDYAEVFYISALHGSNIRKLLPAVKKVYRSAMA 365
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
LST+++T AL +A H P + KL+YAHQGG+NPP I+IHG R + + Y Y
Sbjct: 366 ELSTNKLTEALETAYHRHQPPLVQGRSIKLQYAHQGGRNPPHIIIHGTRTTNVPDSYTTY 425
Query: 418 L 418
L
Sbjct: 426 L 426
>gi|389783337|ref|ZP_10194770.1| ribosome-associated GTPase EngA [Rhodanobacter spathiphylli B39]
gi|388434851|gb|EIL91780.1| ribosome-associated GTPase EngA [Rhodanobacter spathiphylli B39]
Length = 467
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 187/426 (43%), Positives = 268/426 (62%), Gaps = 18/426 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN LT SRDALVA+ PG+TRDRHYG G + F+++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNVLTRSRDALVADMPGVTRDRHYGVCRSGDRPFVVVDTGGL 60
Query: 61 EPEVKKGIMHEM----TKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVL 116
G+ M +Q + AI E+++++F+VD R GL+ QD +I LR+SG+PIV
Sbjct: 61 -----SGVEDTMDVLTARQVRLAIEEANVLVFVVDARDGLLPQDYVILGELRRSGKPIVA 115
Query: 117 VINKSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFT 175
V+NK++ ++ L +F GIG +SA + G + + +L I LP +E T
Sbjct: 116 VVNKTDGLDEQAVLAEFSAFGIGTTLPLSAAHNRGTDDLIRILLPI-LP-----ADEEST 169
Query: 176 NIHSIE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
E I+VAIVG+PN GKSTLIN LLGE R+I + GTTRD I+ E + K+Y
Sbjct: 170 VEADSEDGTIRVAIVGRPNAGKSTLINRLLGEERLIVSNVAGTTRDPIRVPLERDGKRYT 229
Query: 234 LIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG 293
LIDTAGIRR+ + E +EKFSVIKTL+SI A VV++++DA++N++ QD+ + + + G
Sbjct: 230 LIDTAGIRRKARVEEAVEKFSVIKTLQSIAAAQVVVVMIDARENLADQDLTLIGYAMDEG 289
Query: 294 RSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
R+L++ +NKWD + QR + + ++L F +A ISA+ + + M ++ +
Sbjct: 290 RALVIAINKWDDMDQYQRDECRRALDRRLVFADWAKQVQISALHGSGLRELMRAVVRAHA 349
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
S+ L +S +T+ L A +++ P PKLR+AH GG NPP IVIHG R K+I
Sbjct: 350 SATKVLVSSDLTKTLEKAYESYQPPLVNGHAPKLRFAHPGGTNPPTIVIHGTRTKHIAPA 409
Query: 414 YKRYLE 419
Y+RYLE
Sbjct: 410 YQRYLE 415
>gi|94676730|ref|YP_588490.1| GTP-binding protein EngA [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|166224308|sp|Q1LU74.1|DER_BAUCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|94219880|gb|ABF14039.1| GTP-binding protein EngA [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 472
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 193/426 (45%), Positives = 275/426 (64%), Gaps = 9/426 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P++ LVGRPNVGKSTLFN+LT++ DA+VA+Y GLTRDR YG +FI+IDTGG
Sbjct: 1 MIPIIALVGRPNVGKSTLFNKLTHTNDAIVADYSGLTRDRKYGHAKWKNYNFIVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
KKG+ + KQ+ AI E+D+I F+VD GL+ +D+ I +LRK +P ++INK
Sbjct: 61 GIS-KKGLAIHIIKQSLLAIKEADVIFFVVDAITGLMIEDQSIAKYLRKLQKPTFIIINK 119
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENIL------TIELPYKKFFKKKE 173
+ I+ + + L FY + IG I+AL G GI L+ + I L F + +
Sbjct: 120 IDGIDITQVKLQFYAINIGQIFPIAALQGRGINILLKAVFLSLIQNNIPLTNNSFTESTK 179
Query: 174 FTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
+ + + IK+AIVG NVGKSTL NS LGE RV+ +D PGTTRDS ++Y+
Sbjct: 180 YID-QLLMPIKLAIVGSSNVGKSTLANSFLGEERVVVFDMPGTTRDSTYIPMIRAEREYV 238
Query: 234 LIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG 293
LIDTAG+R+R+K ++ EK S +KTL+SI E+NVV+L+LDA + IS QD+++ + I +SG
Sbjct: 239 LIDTAGLRKRSKITDIAEKLSTVKTLQSIEESNVVLLVLDAHKGISDQDLSLLSLIIDSG 298
Query: 294 RSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
R+ ++ VNKWD++ +R IK+ + +L+F++FA +FISA+ NI+ +S+N Y
Sbjct: 299 RAFVIVVNKWDNLSIERRNSIKDTLAYRLSFINFARIHFISALYGTNIDQIFQSVNEAYH 358
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
S +ST+ +T+ L AIK H P R KL+YAH GG NPPI+VIHGN+ +
Sbjct: 359 CSTKRISTALLTKILHIAIKEHQPPIISGYRVKLKYAHYGGYNPPIVVIHGNKATELPVS 418
Query: 414 YKRYLE 419
YKRYL
Sbjct: 419 YKRYLS 424
>gi|389793870|ref|ZP_10197031.1| GTP-binding protein Der [Rhodanobacter fulvus Jip2]
gi|388433503|gb|EIL90469.1| GTP-binding protein Der [Rhodanobacter fulvus Jip2]
Length = 467
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 183/420 (43%), Positives = 266/420 (63%), Gaps = 6/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFN LT SRDALVA+ PG+TRDRHYG G++ F+++DTGG
Sbjct: 1 MLPVVALVGRPNVGKSTLFNVLTRSRDALVADMPGVTRDRHYGICRSGERPFVVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
V+ + KQ + AI E++I++F+VD R GL+ QD +I LR+SG+PI+ V NK
Sbjct: 61 S-GVEDAMDVLTAKQVRLAIEEANILVFVVDARDGLLPQDYVILGELRRSGKPIIAVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ L +F GI +SA + G + +L + LP + + +
Sbjct: 120 TDGLDEQAVLAEFSAFGIATTLPLSAAHNRGTDELIRVVLPL-LPADEEDAAEANGEDGT 178
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I +VAIVG+PN GKSTLIN LLGE R+I D GTTRD I+ E + K+Y LIDTAG
Sbjct: 179 I---RVAIVGRPNAGKSTLINRLLGEERLIVSDVAGTTRDPIRVPLERDGKRYTLIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+ + E +EKFSVIKTL+SI A VV++++DA++N++ QD+ + + + GR+L++
Sbjct: 236 IRRKARVEEAVEKFSVIKTLQSIAAAQVVVVMIDARENLADQDLTLIGYAMDEGRALVIA 295
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + QR + + ++L F+ +A ISA+ + + M ++ + S+ L
Sbjct: 296 INKWDDMDQYQRDECRRALDRRLVFVEWAKQVQISALHGSGLRELMRAVVRAHASATKVL 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+S +T+ L A +++ P PKLR+AH GG NPP IVIHG R K+I Y+RYLE
Sbjct: 356 VSSDLTKTLEKAYESYQPPLVHGHSPKLRFAHPGGNNPPTIVIHGTRTKHIAPAYQRYLE 415
>gi|258545523|ref|ZP_05705757.1| GTP-binding protein EngA [Cardiobacterium hominis ATCC 15826]
gi|258519223|gb|EEV88082.1| GTP-binding protein EngA [Cardiobacterium hominis ATCC 15826]
Length = 463
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/421 (42%), Positives = 271/421 (64%), Gaps = 5/421 (1%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ LVGRPNVGKSTL+N LT SRD+LV++ PGLTRDR+YG+ + I+DTGG
Sbjct: 15 KPLVALVGRPNVGKSTLYNALTRSRDSLVSDTPGLTRDRNYGDATLAGMPCRIVDTGGLL 74
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
E + I + KQ + A+ E+DI++F+VDGR GL D+ I LR+S +P++L +NK+
Sbjct: 75 REEEDQIDRRVDKQARAAVEEADIVVFVVDGRDGLTAVDETIAAELRRSQKPVILAVNKT 134
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNIH 178
+ + + L DFY LGI + I+A + G++ + I+T +E P F +++
Sbjct: 135 DFADPDLILADFYTLGIADTLAIAAEHRRGLQQLTQRIVTRLLETPDAALFGEEDEAENQ 194
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFE-YNNKKYILIDT 237
I +A++G+PN GKSTL+N L+GE R++ GTTRD+I +E ++ LIDT
Sbjct: 195 EEG-IALAVIGRPNAGKSTLLNRLIGEERLVASPVAGTTRDAIAIPYEDAQGDRFTLIDT 253
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AGIRR+ + + IEKFS++KTL +I ANVVIL+LDA + +S QD ++ I GR+LI
Sbjct: 254 AGIRRKARVNDKIEKFSIVKTLDAIERANVVILMLDAHEGVSEQDAHLLGEITRRGRALI 313
Query: 298 VCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+ +NKWD + QR+ I++ ++KL+F+ +A +ISA+ +NI + ++ VY +++
Sbjct: 314 IAINKWDHLNDEQRQAIRSQFERKLHFVDYAEVFYISALHGSNIRQLLPAVKKVYRAAMA 373
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
LST+++T AL +A + H P + KL+YAHQGG+NPP I+IHG R + Y Y
Sbjct: 374 ELSTNKLTEALQAAYRRHQPPLVQGYSIKLQYAHQGGRNPPHIIIHGTRTTNVPASYTTY 433
Query: 418 L 418
L
Sbjct: 434 L 434
>gi|416004362|ref|ZP_11560964.1| GTP-binding protein Der, partial [Acidithiobacillus sp. GGI-221]
gi|339836260|gb|EGQ63865.1| GTP-binding protein Der [Acidithiobacillus sp. GGI-221]
Length = 428
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/383 (43%), Positives = 253/383 (66%), Gaps = 7/383 (1%)
Query: 25 SRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEMTKQTKQAIIESD 84
+R+ALVA+ PGLTRDRHYG + ++++DTGGFEPE ++G++ M QT+ AI E+D
Sbjct: 4 TREALVADLPGLTRDRHYGTAQFEGRQYLVVDTGGFEPEEREGLVAAMAAQTRLAITEAD 63
Query: 85 IIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINSSISL-DFYELGIGNPHII 143
I F+VD ++GL QD I LR+ G+PI LV+NK + + L +FY LG+G P+ I
Sbjct: 64 AICFLVDAKEGLSTQDAEIAQELRRGGKPIYLVVNKMDAKGAVSELPEFYRLGLGTPYTI 123
Query: 144 SALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLL 203
SA +G+G++ LE I + +LP ++ T + + ++A++G+PNVGKSTL+N++L
Sbjct: 124 SAAHGHGVEPLLEAIFS-DLP-----TSEDDTADAARKGPRIAMLGRPNVGKSTLVNTML 177
Query: 204 GENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSIL 263
GE RV+ +D PGTTRDSI+ +E K Y++IDTAG+RRR + E +EK SV+KTL ++
Sbjct: 178 GEKRVLVFDEPGTTRDSIRIPYERQGKPYVMIDTAGMRRRARVGEGLEKLSVLKTLSALR 237
Query: 264 EANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLN 323
EA+VV+L+LDA+ I+ QD ++ E GR ++V VNKWD + +RK +K ++++L+
Sbjct: 238 EADVVLLVLDARLGIAEQDAHLVGVAVELGRPIVVVVNKWDGMTPEERKAVKQELERRLD 297
Query: 324 FLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLI 383
F+ +A ISA+ + +SI+ ++ S H ST+ + RAL I+ H P
Sbjct: 298 FIRYAPVYTISALHGTGVGDLYKSIDQLWIDSRRHFSTAELNRALADVIETHQPPMVGGR 357
Query: 384 RPKLRYAHQGGKNPPIIVIHGNR 406
R KLRY HQGG+NP +V HGN+
Sbjct: 358 RIKLRYCHQGGENPITLVFHGNQ 380
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 14/184 (7%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF-- 60
P + ++GRPNVGKSTL N + + LV + PG TRD K +++IDT G
Sbjct: 157 PRIAMLGRPNVGKSTLVNTMLGEKRVLVFDEPGTTRDSIRIPYERQGKPYVMIDTAGMRR 216
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
V +G+ +T A+ E+D+++ ++D R G+ EQD + + G+PIV+V+NK
Sbjct: 217 RARVGEGLEKLSVLKTLSALREADVVLLVLDARLGIAEQDAHLVGVAVELGRPIVVVVNK 276
Query: 121 SENINS----------SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFK 170
+ + LDF + + ISAL+G G+ + ++I + + ++ F
Sbjct: 277 WDGMTPEERKAVKQELERRLDF--IRYAPVYTISALHGTGVGDLYKSIDQLWIDSRRHFS 334
Query: 171 KKEF 174
E
Sbjct: 335 TAEL 338
>gi|255292050|dbj|BAH90531.1| GTP-binding protein EngA [uncultured bacterium]
Length = 466
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 265/420 (63%), Gaps = 8/420 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ L+GRPNVGKSTLFNRLT +RDALVA++PG+TRDR G G +G + F ++DTGG
Sbjct: 1 MTPVIALLGRPNVGKSTLFNRLTRTRDALVADFPGVTRDRLVGSGQLGDRPFWVVDTGGL 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + + +++ Q A E+D ++ +VD R G D+ I LR G+P+ + +NK
Sbjct: 61 LGEDSQ-LSGKVSDQALAAAQEADAVLLVVDARAGPTADDRTIAETLRTLGRPVRVAVNK 119
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+E++N + +F+ELG+G P ISA +G+G+++ L+ +L P + ++ E +
Sbjct: 120 AEHLNPELVRAEFFELGLGEPTPISASHGHGVRDLLDTVLDAFPPAEPVPEEAEDSRP-- 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
A+VG+PN GKSTLIN LLG++R+I PGTTRD ++ + + + +L+DTAG
Sbjct: 178 ----VFAVVGRPNAGKSTLINRLLGQSRLIESPLPGTTRDCVRVPVQLDGRDCLLLDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR + E IEKFSV+KTL++I A VV+L++D + I QD IA + GR+L+V
Sbjct: 234 LRRRAQVHEAIEKFSVVKTLQAIDLAQVVVLVIDGELGIGEQDARIAGQALQRGRALVVA 293
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
VNK D++ + R ++ ++++L F+ FA FISA + + S+ V+ S++ +
Sbjct: 294 VNKADTLDDSARAALRREVERRLPFIGFAPVEFISAKSGRGLKALTRSLFAVHSSALTRV 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
TS +TR L + + +PP R KLRYAHQGG +PP +VIHG ++ + Y RYLE
Sbjct: 354 PTSELTRLLEAIVTRNPPPMSGGRRAKLRYAHQGGHSPPTVVIHGTQVAGLPAHYLRYLE 413
>gi|340384251|ref|XP_003390627.1| PREDICTED: GTPase Der-like [Amphimedon queenslandica]
Length = 936
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/431 (40%), Positives = 267/431 (61%), Gaps = 17/431 (3%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
+ L+GRPNVGKSTLFN +T SRDALVA++PGLTRDR YG+ G++ IIIDTGG +
Sbjct: 456 TVALIGRPNVGKSTLFNAITRSRDALVADFPGLTRDRRYGKIKFGERDLIIIDTGGLTDK 515
Query: 64 VKKGIMHE-------MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVL 116
+ E ++ QT+ AI E+DI++ ++D R+G V D+ I + LR+SG+ I++
Sbjct: 516 TTASLAGEGPAIPQMISAQTEAAIEEADILLLLLDAREGAVGLDRDIADRLRQSGKAIIV 575
Query: 117 VINKSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFT 175
+NK++ + + + +F+ LG+ +P I+A++ G+ I ++ P K ++
Sbjct: 576 AVNKTDGMEELTATAEFHLLGLSDPIPIAAVHRRGLSRIFRRIESL-FPCAKSESEESAG 634
Query: 176 NIHSI--------EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY 227
+ I+V+++G+PN GKSTL N L G+ RV+ +D PGTTRDSI+ F+Y
Sbjct: 635 ESAKASAKASARGDAIRVSLIGRPNTGKSTLANRLCGQARVLAHDAPGTTRDSIEVDFDY 694
Query: 228 NNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIAN 287
+ Y+LIDTAGIRRR + E IEKFSV+K+L++I + +V +L+LDA +S QD+++
Sbjct: 695 QGRHYVLIDTAGIRRRARISETIEKFSVVKSLQAIADCDVTVLMLDAFDGLSEQDLSLLG 754
Query: 288 FIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMES 347
SGR ++ +NKWD + ++R K+ +++L F SF ISA + M S
Sbjct: 755 LAIRSGRGTVIAINKWDRLSRSERNAFKSEAERRLGFASFCPRCPISARHGAGLGELMRS 814
Query: 348 INHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRL 407
I+ S+ HLS +R+TR L A+ PP + R +LRYAHQGG NPP+IVIHGN+
Sbjct: 815 IDRCRASAFAHLSANRLTRTLEEALDQTPPPLIRGRRIRLRYAHQGGSNPPVIVIHGNKS 874
Query: 408 KYIGNDYKRYL 418
+ Y+RYL
Sbjct: 875 DALPEHYRRYL 885
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+ VA++G+PNVGKSTL N++ + D PG TRD ++ + I+IDT G+
Sbjct: 455 LTVALIGRPNVGKSTLFNAITRSRDALVADFPGLTRDRRYGKIKFGERDLIIIDTGGLTD 514
Query: 243 RNKTF-----EVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
+ I + +T +I EA++++LLLDA++ D +IA+ + +SG+++I
Sbjct: 515 KTTASLAGEGPAIPQMISAQTEAAIEEADILLLLLDAREGAVGLDRDIADRLRQSGKAII 574
Query: 298 VCVNKWDSI 306
V VNK D +
Sbjct: 575 VAVNKTDGM 583
>gi|444920982|ref|ZP_21240820.1| GTPase Der [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507718|gb|ELV07892.1| GTPase Der [Wohlfahrtiimonas chitiniclastica SH04]
Length = 484
Score = 343 bits (881), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 182/426 (42%), Positives = 284/426 (66%), Gaps = 11/426 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS--FIIIDTGGF 60
P++ LVGRPNVGKSTL+N LT +RDALVA+ PGLTRDR YG G +G + +I++DTGG
Sbjct: 5 PIIALVGRPNVGKSTLYNALTRTRDALVADQPGLTRDRRYGMGRVGSEESPYIVLDTGGL 64
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + + + Q +A+ ++D+I FI+DGR + D+ I +R++ +P+V+V+NK
Sbjct: 65 SGDDSNHMDNLIAGQVWKAVEDADLIYFILDGRNDVTGYDEEIAAMIRRTNKPVVVVVNK 124
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNI 177
SE + +++ FY LG+G+P ISA + GI + + + EL Y++ + EF
Sbjct: 125 SEGKDEDLAIAPFYTLGMGDPIAISAAHNRGILDLVHSTFDRHPELAYEEEAENDEFEGD 184
Query: 178 HS----IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
+ I++A++G+PN GKSTLIN +LGE RV+ D GTTRD+I+ FE +++I
Sbjct: 185 EEEEEDLGPIRLAVLGRPNAGKSTLINRILGEERVLASDVAGTTRDAIEIPFEKEGREFI 244
Query: 234 LIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG 293
LIDTAGIRRR++ + IEKFSVIK+L+++ ++NVV+ + DA + +S QD + + ESG
Sbjct: 245 LIDTAGIRRRSRIDDKIEKFSVIKSLEAMQKSNVVVFVFDAHEGLSDQDAGLLGNVLESG 304
Query: 294 RSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
R+L++ VNKWD + ++R+ IK +K F+ F FISA+ +N++ ++ + +D
Sbjct: 305 RALVLAVNKWDHLPDDEREWIKQEFTRKFAFIDFTKPIFISALHGSNVDKVLKMAINAFD 364
Query: 354 SSIIHLSTSRITRALISAI-KNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGN 412
+++ +T+ ++ L +A+ K+HPP + L PKLRYAHQGGKNPP IVIHG+R+ ++
Sbjct: 365 NAMKKFTTNELSNILEAAVHKHHPPVVQGLA-PKLRYAHQGGKNPPRIVIHGSRITHVKP 423
Query: 413 DYKRYL 418
DY RYL
Sbjct: 424 DYVRYL 429
>gi|424794306|ref|ZP_18220291.1| GTP-binding protein, probable [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422796026|gb|EKU24614.1| GTP-binding protein, probable [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 465
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 178/421 (42%), Positives = 262/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKSTLFN LT SRDALV + PG+TRDR+YG + ++ F+I+DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTLFNALTRSRDALVHDQPGVTRDRNYGVCRLEPETPFVIVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E ++G+ Q + A E+D+++F+VDGR+G D I +LRK +P +L+IN
Sbjct: 61 ISGE-EEGLAGATADQARSAAGEADLVLFVVDGREGSSSLDDEILAWLRKLARPTLLLIN 119
Query: 120 KSENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + + +F G+G +SA + +GI + LE +L+ LP + +
Sbjct: 120 KIDGTDEDQVRAEFARYGLGEAIAVSAAHRHGIDDLLEEVLS-RLPEEGAGATLDTDPAR 178
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI + +++ Y LIDTA
Sbjct: 179 ----MRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLQRDDRLYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR + E +EKFSV KTL++I + V +LLLDA + ++ QD ++ I ++GR+L+V
Sbjct: 235 GLRRRGRVEEAVEKFSVFKTLQAIEQCEVAVLLLDATEGVTDQDASVLGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + QR+ + + +KL F+ +A ISA + + SI+ + S+I
Sbjct: 295 AVNKWDGLTDYQREQAEALLSRKLGFVPWAEAVRISAKHGSGLRELFRSIHSAHASAIRE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEVAYETNPPPSIRGHVSKLRYVHPGGSNPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|149375007|ref|ZP_01892780.1| predicted GTPase [Marinobacter algicola DG893]
gi|149360896|gb|EDM49347.1| predicted GTPase [Marinobacter algicola DG893]
Length = 453
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/399 (44%), Positives = 266/399 (66%), Gaps = 8/399 (2%)
Query: 22 LTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKKGIMHEMTKQTKQAII 81
+T SRDALVA++PGLTRDR YGEG + FI+IDTGG + EM +Q+ QA+
Sbjct: 1 MTRSRDALVADFPGLTRDRKYGEGNYEGQRFIVIDTGGLTGGEEGLDA-EMARQSMQAVE 59
Query: 82 ESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINSSISL-DFYELGIGNP 140
E+DI++F+VDG+ GL D+LI LRK+G+ LV+NK++ + I+ DFY LG +
Sbjct: 60 EADIVLFLVDGKAGLNGGDELIAAHLRKTGKRAHLVVNKTDGQDPDIAASDFYALGFDST 119
Query: 141 HIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLIN 200
++I+A + GI++ LE +L E + + + I ++ IVG+PNVGKSTL+N
Sbjct: 120 YLIAASHNRGIRSMLEELLPSEEEREAQDRADRYPGI------RIGIVGRPNVGKSTLVN 173
Query: 201 SLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLK 260
+LGE+RVI YD PGTTRDS+ FE + +Y LIDTAG+RRR EV+EKFS+IKTL+
Sbjct: 174 RMLGEDRVIVYDMPGTTRDSVYIPFERMDNQYTLIDTAGVRRRKNVSEVVEKFSIIKTLQ 233
Query: 261 SILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKK 320
+I +A+VVIL++DA++ + QD+++ F+ ++GRSL+V VNKWD + R +K +++
Sbjct: 234 AIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRSLVVAVNKWDGMDPEDRAKVKEQVQR 293
Query: 321 KLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRK 380
+L+FL +A ++ISA+ + + +S++ Y+S++ T+R+T L A H P
Sbjct: 294 RLDFLDYADKHYISALHGSGVGVMYDSVHACYESAMAKWPTNRLTAILQDATAQHQPPLV 353
Query: 381 KLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+ R KLRYAHQGG NPP+IV+HGN+ + YKRYLE
Sbjct: 354 QGRRIKLRYAHQGGSNPPVIVVHGNQTDALPGAYKRYLE 392
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 18/166 (10%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKK 66
+VGRPNVGKSTL NR+ +V + PG TRD Y + +IDT G +K
Sbjct: 160 IVGRPNVGKSTLVNRMLGEDRVIVYDMPGTTRDSVYIPFERMDNQYTLIDTAGV--RRRK 217
Query: 67 GIMHEMTK----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ + K +T QAI ++ ++I ++D R+GLV+QD + F+ +G+ +V+ +NK +
Sbjct: 218 NVSEVVEKFSIIKTLQAIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRSLVVAVNKWD 277
Query: 123 NINSSI----------SLDFYELGIGNPHIISALYGNGIKNFLENI 158
++ LDF L + H ISAL+G+G+ +++
Sbjct: 278 GMDPEDRAKVKEQVQRRLDF--LDYADKHYISALHGSGVGVMYDSV 321
>gi|285018364|ref|YP_003376075.1| GTP-binding protein enga [Xanthomonas albilineans GPE PC73]
gi|283473582|emb|CBA16085.1| probable gtp-binding protein enga [Xanthomonas albilineans GPE
PC73]
Length = 465
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/421 (42%), Positives = 265/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKSTLFN LT SRDALV + PG+TRDRHYG + ++ F+I+DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTLFNALTRSRDALVHDQPGVTRDRHYGVCRLQPETPFVIVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E ++G+ Q + A E+D+++F+VDGR+G D I ++LRK +P +L+IN
Sbjct: 61 ISGE-EEGLAGATASQARAAAGEADLVLFVVDGREGASSLDDEILSWLRKLARPTILLIN 119
Query: 120 KSENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + + +F G+G +SA + GI + L+++L LP + + T
Sbjct: 120 KIDGTDEDQVRAEFARYGLGEAIAVSAAHRQGIDDLLDHVLA-RLPEEGAGE----TLDT 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I D PGTTRDSI E +++ Y LIDTA
Sbjct: 175 DPGRMRIAFVGRPNVGKSTLVNRLLGEERMIASDVPGTTRDSIAVDLERDDRPYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR + E +EKFSV KTL++I + V +LLLDA + ++ QD ++ I ++GR+L+V
Sbjct: 235 GLRRRGRVEEAVEKFSVFKTLQAIEQCEVAVLLLDASEGVTDQDASVLGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + QR+ + + +KL F+ +A ISA + + +I++ + S++
Sbjct: 295 AVNKWDGLTDYQREQAEALLSRKLGFVPWAEAVRISAKHGSGLRELFRAIHNAHASAVRE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A +++PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEVAYESNPPPSIRGHVSKLRYVHPGGSNPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|433676277|ref|ZP_20508410.1| GTP-binding protein EngA [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440731370|ref|ZP_20911393.1| GTP-binding protein Der [Xanthomonas translucens DAR61454]
gi|430818609|emb|CCP38690.1| GTP-binding protein EngA [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440373235|gb|ELQ09999.1| GTP-binding protein Der [Xanthomonas translucens DAR61454]
Length = 465
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 176/421 (41%), Positives = 262/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKSTLFN LT SRDALV + PG+TRDR+YG + + F+I+DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTLFNALTRSRDALVHDQPGVTRDRNYGVCRLEPDTPFVIVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E ++G+ +Q + A E+D+++F+VDGR+G D I +LRK +P +L+IN
Sbjct: 61 ISGE-EEGLAGATAEQARSAAGEADLVLFVVDGREGSSSLDDEILAWLRKLARPTLLLIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + + +F G+G +SA + +GI + LE +L+ LP + +
Sbjct: 120 KIDGTDEDQVRAEFARYGLGEAIAVSAAHRHGIDDLLEEVLS-RLPEEGAGATLDTDPAR 178
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI + +++ Y LIDTA
Sbjct: 179 ----MRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLQRDDRLYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR + E +EKFSV KTL++I + V +LLLDA + ++ QD ++ I ++GR+L+V
Sbjct: 235 GLRRRGRVEEAVEKFSVFKTLQAIEQCEVAVLLLDATEGVTDQDASVLGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + QR+ + + +KL F+ +A ISA + + +I+ + S++
Sbjct: 295 AVNKWDGLTDYQREQAEALLSRKLGFVPWAEAVRISAKHGSGLRELFRAIHSAHASAVRV 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEVAYETNPPPSIRGHVSKLRYVHPGGSNPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|429462728|ref|YP_007184191.1| GTP-binding protein [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|429338242|gb|AFZ82665.1| GTP-binding protein [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
Length = 348
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/349 (49%), Positives = 252/349 (72%), Gaps = 12/349 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGR NVGKSTLFNRLT +++ALVA++PGLTRDRHYGE + +FI+IDTGG +
Sbjct: 4 KPIVSIVGRANVGKSTLFNRLTKTKNALVADFPGLTRDRHYGEAHFASYNFIVIDTGGLD 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLVINK 120
K ++ QT QAI+ESDIIIF++DGR G+ QD I LRK S + I+L INK
Sbjct: 64 VHSKDQFSLKIASQTNQAILESDIIIFLLDGRSGICSQDYEIAKLLRKFSDKRILLAINK 123
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTN--- 176
SE +N S+ S +FYELG+G P++IS+ +G+GI + +E+ L+ F + +
Sbjct: 124 SEGMNLSNFSNEFYELGLGKPYLISSSHGDGIYHLIEDSLS-------GFSQTDVDENSI 176
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ S IK+AI+GKPNVGKSTLINS LGE R+I +D PGTT+DSI F+++++KYIL+D
Sbjct: 177 VESNSSIKLAIIGKPNVGKSTLINSFLGEERLIAFDMPGTTKDSINVDFKFDDRKYILVD 236
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RR+++ IEKFSVIKT+++I ++VV+L++DA + IS QD ++A FI ESG+++
Sbjct: 237 TAGMRRKSRVINYIEKFSVIKTIQAIESSDVVLLVIDANEEISDQDAHMAGFILESGKAI 296
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
++ NK D+I + K ++ + ++K++FLSFA + ISA+K +IN F
Sbjct: 297 VIAFNKCDTIEKEKLKNLEKSFRRKMHFLSFAKLHMISALKKYHINDFF 345
>gi|400406505|ref|YP_006589253.1| ribosome-associated GTPase EngA [secondary endosymbiont of
Heteropsylla cubana]
gi|400364758|gb|AFP85825.1| ribosome-associated GTPase EngA [secondary endosymbiont of
Heteropsylla cubana]
Length = 491
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 196/441 (44%), Positives = 280/441 (63%), Gaps = 24/441 (5%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P + +VGR NVGKSTLFNRLT +RDALVAN+PGLTRDR YG F IIDT G
Sbjct: 1 MIPTVAIVGRQNVGKSTLFNRLTRTRDALVANFPGLTRDRKYGIVKFEDNQFNIIDTAGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
K + + + Q+ AI E+DI++FIVDGR GL++ D I + LR+ + ++V+NK
Sbjct: 61 NDNCDK-LENLINTQSLLAITEADIVLFIVDGRAGLMKDDINIAHHLRQQKKTTLVVVNK 119
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYK------------- 166
++ +N I S DFY LGI ISA +G+GI L I + Y+
Sbjct: 120 TDGMNPEIASGDFYALGIKQIVSISASHGSGITILLNKIFSYWKQYELSKPKINLEDRSY 179
Query: 167 KFFKKKEFT-------NIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTT 217
F K T NI+S++ +K+AIVG+PNVGKSTLIN +LG +RVI YD PGTT
Sbjct: 180 TFLKNTNQTLSLEKKNNIYSLKLPPLKLAIVGRPNVGKSTLINCILGIDRVIVYDMPGTT 239
Query: 218 RDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQN 277
RD+I YN K YILIDTAG+R+ +K E IEKFS+IKTLK+I +ANVV+L+++A+ +
Sbjct: 240 RDNIYIPVIYNKKAYILIDTAGVRKNSKVKERIEKFSIIKTLKAIQDANVVLLVINARDD 299
Query: 278 ISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIK 337
IS QD+++ +F+ SGR+L++ VNK D + + RK IK + + +F++F +FIS++
Sbjct: 300 ISDQDVSLLSFVLNSGRALVIAVNKSDGLSSDTRKKIKEELDRCFSFINFVQIHFISSLY 359
Query: 338 LNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNP 397
I + S+N Y + +ST+ +TR + + + ++ P + R KL+YAH GG NP
Sbjct: 360 NIGIGNLFNSVNEAYRCANKRISTALLTRIMHTGLNSYQPPLVQGRRVKLKYAHTGGYNP 419
Query: 398 PIIVIHGNRLKYIGNDYKRYL 418
I+VIHG ++ + ++YKRYL
Sbjct: 420 LILVIHGTKVNELPDNYKRYL 440
>gi|167626610|ref|YP_001677110.1| GTP-binding protein EngA [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189037148|sp|B0TZQ0.1|DER_FRAP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|167596611|gb|ABZ86609.1| GTP-binding protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 465
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 176/424 (41%), Positives = 267/424 (62%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNSRDALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSRDALVFDFEGVTRDRQYGQAKYDDLGYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLR-KSGQPIVLVIN 119
+ G M KQ++ AI E++++ F+VDGR GL D+ + N LR K + +V+V
Sbjct: 61 SDQ-DAGFDEFMAKQSQMAIDEANLVFFVVDGRSGLTSGDEYVANLLRQKDKRVVVVVNK 119
Query: 120 KSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
S +FYELG +SA + + L+ L + P +F++ T H
Sbjct: 120 VDGVEEESAMAEFYELGFDKVFAVSAAHRRNTQKLLDKFL--KKPLNEFYRDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + KY ++D
Sbjct: 178 EQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGHKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RRR K + +EKFSVIKTL++I ++NVV+ ++DA++ IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRRRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDAREGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ +NKWD + R ++K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAINKWDGMTEEDRNLVKQDLKRKLFFLEDYVDVHFISALHGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVNRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|331658656|ref|ZP_08359600.1| ribosome-associated GTPase EngA [Escherichia coli TA206]
gi|331054321|gb|EGI26348.1| ribosome-associated GTPase EngA [Escherichia coli TA206]
Length = 396
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/382 (45%), Positives = 247/382 (64%), Gaps = 30/382 (7%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 14 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 73
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 74 DG-TEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSREKPTFLVANK 132
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 133 TDGLDPDQAVVDFYALGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 188
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 189 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 248
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 249 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 308
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISA 335
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA
Sbjct: 309 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISA 368
Query: 336 IKLNNINSFMESINHVYDSSII 357
+ + + + ES+ YDSS +
Sbjct: 369 LHGSGVGNLFESVREAYDSSTV 390
>gi|399890216|ref|ZP_10776093.1| GTP-binding protein Der [Clostridium arbusti SL206]
Length = 438
Score = 337 bits (863), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 182/425 (42%), Positives = 262/425 (61%), Gaps = 19/425 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y E F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVEDTPGVTRDRIYAEAEWINNLFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q + AI +D+I+FIVDG+QGL + D + LRKS +PIVLV+NK
Sbjct: 63 PESNDIIVAQMRRQAQMAIETADVIVFIVDGKQGLTDADNEVALMLRKSRKPIVLVVNKI 122
Query: 122 ENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ + + S +FY LGIG+P ISA G G+ + L+ ++ + F IH+I
Sbjct: 123 DKLADEQNSFEFYNLGIGDPITISASQGLGLGDMLDKVV------------EHFKEIHNI 170
Query: 181 ----EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
EY K+A+VG+PNVGKS+LIN LLGE+RVI D PGTTRD++ S E + K+ILID
Sbjct: 171 DENDEYTKIAVVGRPNVGKSSLINRLLGEDRVIVSDIPGTTRDAVDSYLETDKGKFILID 230
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RR++K E IE++SVI+TL +I ++V IL+LDA + +S QD I + +E +++
Sbjct: 231 TAGLRRKSKVKEEIERYSVIRTLAAIERSDVCILILDATEQLSDQDEKIIGYAHELSKAI 290
Query: 297 IVCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
+V VNKWD I + + + K NI+ KL+F+++A + FISA +N ++ + YD+
Sbjct: 291 MVIVNKWDLIEKDDKTMDQFKKNIQYKLSFMAYAQYMFISAKTGQRVNKLLDEVKKCYDN 350
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ST + + A+ P L R K+ Y Q PP + N + Y
Sbjct: 351 YCRRISTGVLNDVISKAVLMKEPPVVALKRLKIYYVTQVAIKPPTFIFFVNDTNALHFSY 410
Query: 415 KRYLE 419
+RYLE
Sbjct: 411 ERYLE 415
>gi|254875720|ref|ZP_05248430.1| GTP-binding protein engA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841741|gb|EET20155.1| GTP-binding protein engA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 465
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/424 (41%), Positives = 267/424 (62%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNSRDALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSRDALVFDFEGVTRDRQYGQAKYDDLGYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLR-KSGQPIVLVIN 119
+ G M KQ++ AI E++++ F+VDGR GL D+ ++N LR K + +V+V
Sbjct: 61 SDQ-DAGFDEFMAKQSQMAIDEANLVFFVVDGRSGLTSGDEYVSNLLRQKDKRVVVVVNK 119
Query: 120 KSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
S +FYELG +SA + + L+ L + P +F++ T H
Sbjct: 120 VDGVEEESAMAEFYELGFDKVFAVSAAHRRNTQKLLDKFL--KKPLNEFYRDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + KY ++D
Sbjct: 178 EQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGHKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RRR K + +EKFSVIKTL++I ++NVV+ ++DA++ IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRRRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDAREGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ +NKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAINKWDGMTEEDRNQVKQDLKRKLFFLEDYVDVHFISALHGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVNRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|374849846|dbj|BAL52850.1| GTP-binding protein [uncultured gamma proteobacterium]
Length = 449
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 268/420 (63%), Gaps = 9/420 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF-- 60
PV+ LVGRPNVGKSTLFNRLT +RDALVA+Y GLTRDR YG + + F ++DT G
Sbjct: 7 PVVALVGRPNVGKSTLFNRLTCTRDALVADYLGLTRDRQYGRCRVTDRPFWLVDTPGVPS 66
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
P K G+ + +Q + A+ E+D+++F+VD R+GL D+ I +R++ +P++LVINK
Sbjct: 67 SPAGKGGLDDAVLRQVQVALKEADLVLFLVDAREGLTAADEEIAAQVRRNAKPVILVINK 126
Query: 121 --SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
+ NSS++ +F LG G ISA +G + + +E IL ELP + E
Sbjct: 127 IDGRDANSSLA-EFARLGFGETVSISAAHGLRVASLIEKILA-ELPQAG---ELEEGEDW 181
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I+VA+ G+PNVGKSTLIN LLGE RV+ D PGTTRD+I FE ++L+DTA
Sbjct: 182 EEDRIRVAVAGRPNVGKSTLINRLLGEERVVVADVPGTTRDTIAVPFERGGLNFLLLDTA 241
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRRR++ E IEKFSVIK +++I +A+VVI L+DA++ + QD + I E+G+++++
Sbjct: 242 GIRRRSRVEEKIEKFSVIKAIQAIEQAHVVIFLIDAKEGVVTQDARLLGLILEAGKAVVL 301
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + Q++ ++ L + FA +SA+ + + + + Y+ + +
Sbjct: 302 GLNKWDGLSSEQKRRCFFQLETDLRHVDFAEKVPLSALHGTGVGNLFDRVVEAYEHAGVE 361
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T+ +T+ L AI+ +PP + + +L++AHQGGK PP +VIHGNR + I Y+R+L
Sbjct: 362 IPTAYLTKVLHQAIERNPPPMTRGRKIRLKFAHQGGKYPPKLVIHGNRTEDIPLSYRRFL 421
>gi|244538898|dbj|BAH82941.1| GTP-binding protein EngA [Candidatus Ishikawaella capsulata Mpkobe]
Length = 473
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/430 (44%), Positives = 274/430 (63%), Gaps = 16/430 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+ ++ LVGRPNVGKSTLFN LT +RDALV N PGLTRD YG+ + +F++IDTGG
Sbjct: 2 LSTIIALVGRPNVGKSTLFNCLTGTRDALVLNSPGLTRDLKYGKFTVKGFNFVVIDTGGI 61
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + GI E+ + AI E+DII F+VD + GL+ DK I ++L K+ + L++NK
Sbjct: 62 E-DTTDGIETEVVDLSLSAIDEADIIFFMVDAQTGLMPTDKYIAHYLYKNKKTTFLIVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPY------KKFFKKKE 173
+ I I++ +FYELG + I+A + GI N LE L +P+ K+ KK
Sbjct: 121 VDEIAIPIAITEFYELGFTEIYPITASHNRGILNILEKAL---IPWINNSHNKQIIKKNN 177
Query: 174 F---TNIHSIEY--IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYN 228
N++S + I++AIVG+PNVGKST+ N + G+NRVI + PGTTRDSI Y
Sbjct: 178 LLFPQNVYSQKQLSIQIAIVGRPNVGKSTIANRIAGKNRVIVSEIPGTTRDSISIPIIYE 237
Query: 229 NKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANF 288
+ YI+IDTAG+R RNK IE FSVIKT++SI ++NV+IL++DA + I QDI + NF
Sbjct: 238 KRDYIIIDTAGVRNRNKRNNKIEHFSVIKTMQSIEQSNVIILVVDAVEGIIHQDICLLNF 297
Query: 289 IYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
I++SG+ L++ +NKWD + + + K + +L F F +FISA+ + + +S+
Sbjct: 298 IFKSGKPLVIVINKWDMLNKKNKILFKEILNHRLYFAKFIQTHFISALHGMGMQNLFKSV 357
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
Y+SS H++TS +TR + A +N+PP R KL+YAH GG +PPI+VIHGN+ K
Sbjct: 358 REAYESSTKHINTSILTRIMYMAKENNPPPLIHGRRIKLKYAHAGGYSPPIVVIHGNQTK 417
Query: 409 YIGNDYKRYL 418
I YKRYL
Sbjct: 418 NIPESYKRYL 427
>gi|312622952|ref|YP_004024565.1| ribosome-associated GTPase enga [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203419|gb|ADQ46746.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
kronotskyensis 2002]
Length = 440
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 265/422 (62%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + +VGRPNVGKSTLFNRL R A+V + PG+TRDR GE +F +IDTGG
Sbjct: 1 MKPTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + I+ +M +Q + AI SD+IIF+VDG+ GL + D+ + N LR S +PIVL +NK
Sbjct: 61 EPYSEDIILKQMRRQAQFAIDMSDVIIFMVDGKTGLTDADREVANMLRASKKPIVLAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+NI+ + +FYELG+ +P +SA +G G+ + L+ ++ +F K+ I
Sbjct: 121 IDNISQQAMIYEFYELGLSDPIAMSAEHGAGVGDVLDAVVN-------YFNKEGINEIEE 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAI+GKPN GKS+L+N +LGE RVI D PGTTRD+I S FE+ LIDTAG
Sbjct: 174 -GTIKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRDAIDSTFEFEGIPITLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K ++ +E++S+++TL++I +++ I+LLD +N+S QD +A + YE+G+ IV
Sbjct: 233 LRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTENVSEQDAKVAGYAYEAGKGCIVA 292
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ +++ K I++KL+FL FA FISA + +E++ +VYD+
Sbjct: 293 VNKWDAVEKDEKTADEFKKQIEEKLSFLKFAPVLFISAKTGFRVKKLLETVLYVYDNYTR 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T ++ L A + P K + K+ Y Q G+ PP I I N Y+RY
Sbjct: 353 RITTGQLNDVLAEATTIYQPPSDKGKQLKIYYMTQVGEKPPKIAIFVNSKDLFHFSYQRY 412
Query: 418 LE 419
+E
Sbjct: 413 IE 414
>gi|380512244|ref|ZP_09855651.1| GTP-binding protein Der [Xanthomonas sacchari NCPPB 4393]
Length = 465
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/421 (41%), Positives = 263/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKSTLFN LT SRDALV + PG+TRDRHYG + ++ F+I+DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTLFNALTRSRDALVHDQPGVTRDRHYGVCRLQPETPFVIVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E ++G+ +Q + A E+D+I+F+VDGR+G D I +LRK +P +L+IN
Sbjct: 61 ISGE-EEGLAGATAEQARAAAGEADLILFVVDGREGSSALDDEILAWLRKLARPTLLLIN 119
Query: 120 KSENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + + +F G+G+ +SA + +GI + L+ +L LP + + +
Sbjct: 120 KIDGTDEDQVRAEFARYGLGDAIAVSAAHRHGIDDLLDEVLE-RLPEEGAGETLDTDPAR 178
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI E + + Y LIDTA
Sbjct: 179 ----MRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDGRLYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR + E +EKFS KTL++I + V +L+LDA + ++ QD + I ++GR+L+V
Sbjct: 235 GLRRRGRVEEAVEKFSAFKTLQAIEQCQVAVLMLDAGEGVTDQDATVLGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+S+A ISA + + ++I+ + S++
Sbjct: 295 AINKWDGQSDYQRAQAEDLLSRKLGFVSWAEAVRISAKHGSGLRELFQAIHRAHASAVRE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A +++PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEIAYESNPPPSIRGHVSKLRYVHPGGSNPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|440780870|ref|ZP_20959341.1| GTP-binding protein Der [Clostridium pasteurianum DSM 525]
gi|440221458|gb|ELP60663.1| GTP-binding protein Der [Clostridium pasteurianum DSM 525]
Length = 438
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/422 (43%), Positives = 258/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y E F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVEDTPGVTRDRIYAEAEWLNNLFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q + AI +D+I+F+VDG+QGL + D + LRKS +PIVLV+NK
Sbjct: 63 PESSDIILAQMRRQAQMAIETADVIVFLVDGKQGLTDADNEVALMLRKSKKPIVLVVNKI 122
Query: 122 ENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTN-IHS 179
+ + + S +FY LGIG+P ISA G G+ + L+ I+ KE N
Sbjct: 123 DKLADEQNSFEFYNLGIGDPVTISASQGLGLGDMLDKIVG---------NFKELDNGSED 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
EYIK+A+VG+PNVGKS+LIN LLGE+RVI D PGTTRD++ S E K++LIDTAG
Sbjct: 174 DEYIKIAVVGRPNVGKSSLINKLLGEDRVIVSDIPGTTRDAVDSYLETEEGKFVLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E IE++SVI+TL +I A+V IL+LDA + +S QD I + +E ++++V
Sbjct: 234 LRRKSKVKEEIERYSVIRTLAAIERADVCILILDATEQLSDQDEKIIGYAHELNKAIMVI 293
Query: 300 VNKWDSIIHNQRK--IIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + K NI+ KL+F+ +A + FISA +N +E + Y++
Sbjct: 294 VNKWDLIEKDDKTMNVFKKNIQYKLSFMPYAQYMFISAKTGQRVNKVLEEVKKCYNNYCR 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST + + A+ P L R K+ Y Q PP + N I Y+RY
Sbjct: 354 RISTGVLNDIVSKAVLMKEPPVVALKRLKIYYVTQVSIKPPTFIFFVNDTNAIHFSYERY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|387886143|ref|YP_006316442.1| GTP-binding protein EngA [Francisella noatunensis subsp. orientalis
str. Toba 04]
gi|386870959|gb|AFJ42966.1| GTP-binding protein EngA [Francisella noatunensis subsp. orientalis
str. Toba 04]
Length = 465
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/424 (41%), Positives = 264/424 (62%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNSRDALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSRDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLR-KSGQPIVLVIN 119
G M KQ++ AI E++++ F+VDGR GL D+ + N LR K + +V+V
Sbjct: 61 SDH-DAGFDEFMAKQSQMAIDEANLVFFVVDGRSGLTSGDEYVANLLRQKDKRVVVVVNK 119
Query: 120 KSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
S +FYELG ISA + + L+ L + P F++ T H
Sbjct: 120 VDGVEEESAMAEFYELGFERVFAISAAHRRNTQKLLDKFL--KKPLNGFYQDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + KY ++D
Sbjct: 178 EQLRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHEHKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA++ IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDAREGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLS-FAMFNFISAIKLNNINSFMESINHVYDSS 355
++ +NKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAINKWDGMTEEDRNQVKQDLKRKLFFLENYVDIHFISALHGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKVTTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVNRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|312794132|ref|YP_004027055.1| ribosome-associated gtpase enga [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344995690|ref|YP_004798033.1| GTP-binding protein engA [Caldicellulosiruptor lactoaceticus 6A]
gi|312181272|gb|ADQ41442.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|343963909|gb|AEM73056.1| GTP-binding protein engA [Caldicellulosiruptor lactoaceticus 6A]
Length = 440
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 264/422 (62%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + +VGRPNVGKSTLFNRL R A+V + PG+TRDR GE +F +IDTGG
Sbjct: 1 MKPTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + I+ +M +Q + AI SD+IIF+VDG+ GL + D+ + N LR S +PIVL +NK
Sbjct: 61 EPYSEDIILKQMRRQAQFAIDMSDVIIFMVDGKTGLTDADREVANMLRTSKKPIVLAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+NI+ + +FYELG+ +P +SA +G G+ + L+ ++ +F K+ I
Sbjct: 121 IDNISQQAMIYEFYELGLSDPIAMSAEHGTGVGDVLDAVVN-------YFDKEGINEIEE 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAI+GKPN GKS+L+N +LGE RVI D PGTTRD+I S FE+ LIDTAG
Sbjct: 174 -STIKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRDAIDSTFEFEGIPITLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K ++ +E++S+++TL++I +++ I+LLD +++S QD +A + YE+G+ IV
Sbjct: 233 LRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTEDVSEQDAKVAGYAYEAGKGCIVA 292
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ +++ K I++KL+FL FA FISA + +E++ +VY +
Sbjct: 293 VNKWDAVEKDEKTADEYKKQIEEKLSFLKFAPVLFISAKTGFRVKKLLETVLYVYGNYTR 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T ++ L A + P K + K+ Y Q G+ PP I I N Y+RY
Sbjct: 353 RITTGQLNDVLAEATTIYQPPSDKGKQLKIYYMTQVGEKPPKIAIFVNSKDLFHFSYQRY 412
Query: 418 LE 419
+E
Sbjct: 413 IE 414
>gi|28199496|ref|NP_779810.1| GTP-binding protein EngA [Xylella fastidiosa Temecula1]
gi|182682229|ref|YP_001830389.1| GTP-binding protein EngA [Xylella fastidiosa M23]
gi|386083556|ref|YP_005999838.1| GTP-binding protein EngA [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|417558733|ref|ZP_12209693.1| GTPase [Xylella fastidiosa EB92.1]
gi|32129520|sp|Q87B41.1|DER_XYLFT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238691082|sp|B2I7V0.1|DER_XYLF2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|28057611|gb|AAO29459.1| GTP-binding protein [Xylella fastidiosa Temecula1]
gi|182632339|gb|ACB93115.1| small GTP-binding protein [Xylella fastidiosa M23]
gi|307578503|gb|ADN62472.1| GTP-binding protein EngA [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|338178568|gb|EGO81553.1| GTPase [Xylella fastidiosa EB92.1]
Length = 465
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 174/421 (41%), Positives = 262/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI-GKKSFIIIDTGG 59
M P++ LVGRPNVGKSTLFN LT +RDALV + PG+TRDRHYG I G+ F ++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTLFNALTLTRDALVHDQPGVTRDRHYGVCRIDGQPLFAVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ + G+ +Q + A+ E+D+++F+V+ R+G D I +LRK QP +LVIN
Sbjct: 61 MVGK-EDGLAGATARQARLAVAEADVVLFVVNVREGASALDDDILAWLRKLSQPTLLVIN 119
Query: 120 KSENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++++ +F G + +SA + G+ + +E +L LP + E N
Sbjct: 120 KIDGVSDTTVHSEFAHYGFSDVVPVSAAHRQGLDDLIEQVLAW-LPERSI---GEAFNED 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
S E I +A VG+PNVGKSTL+N LLGE R+I D PGTTRDSI E + +Y L+DTA
Sbjct: 176 S-ERIHIAFVGRPNVGKSTLVNRLLGEERMIVSDVPGTTRDSITVDLERDELRYRLVDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +EKFS KTL++I + V +LLLDA + ++ QD + I ++G++L+V
Sbjct: 235 GLRRKSKVEEAVEKFSAFKTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ ++ + +KL F+++A +SA + + +I+ + S++
Sbjct: 295 AMNKWDGLATYQREQAEDLLSRKLGFVNWAEVVRLSAKHGSGLRELFRAIHRAHVSALRQ 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + PP + KLRY H G NPP ++HG RLK + + YKRYL
Sbjct: 355 FSTSEVNKALEIAYQTAPPPSIRGHVSKLRYVHPAGSNPPTFIVHGTRLKVLPDTYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|404497169|ref|YP_006721275.1| GTP-binding protein Der [Geobacter metallireducens GS-15]
gi|418066669|ref|ZP_12704029.1| ribosome-associated GTPase EngA [Geobacter metallireducens RCH3]
gi|123571482|sp|Q39T85.1|DER_GEOMG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78194772|gb|ABB32539.1| GTPase EngA [Geobacter metallireducens GS-15]
gi|373560162|gb|EHP86434.1| ribosome-associated GTPase EngA [Geobacter metallireducens RCH3]
Length = 439
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 261/422 (61%), Gaps = 13/422 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P++ +VGRPNVGKSTLFNRL R A+V + PG+TRDR+Y + FI+IDTGGF
Sbjct: 1 MMPLVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFEAPFILIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + ++ +M +Q++ A+ E+D+IIF++DGR GL D + LR+ +P+ V+NK
Sbjct: 61 EPVSEDRLLQQMREQSQLAMEEADVIIFLMDGRAGLTPSDVEVVEMLRRVKKPVFFVVNK 120
Query: 121 --SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
E I + + DFY LGIG H ISA + G+ + +E ++ LP K T +
Sbjct: 121 VDGEKIENEAA-DFYTLGIGTLHTISAEHNRGVNDLMEEVVAA-LP-------KSSTRLD 171
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ ++A+VG+PNVGKS+L+N LLG RV+ TPGTTRDS+ +LF N K+Y+LIDTA
Sbjct: 172 DEDITRIAVVGRPNVGKSSLVNRLLGFERVVANPTPGTTRDSVDTLFACNKKRYLLIDTA 231
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR+ KT + +EK+SV+ +L+SI A+VV+++++A++ ++ QD IA + +E+G++ I
Sbjct: 232 GIRRKGKTTQKLEKYSVVDSLRSIERADVVLIIINAEEGVTEQDERIAGYAFEAGKACIF 291
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD++ + + K + IK + +LSFA F+SA IN ME + V
Sbjct: 292 VVNKWDTLAKDNSTLGKFVDQIKTEFKYLSFAPIVFVSAKSGQRINRVMEEVERVMAQYS 351
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+STS + R A++ H R K +A Q G PP V+ N+ + + Y+R
Sbjct: 352 KRVSTSDLNRVFSEAVEKHHAPLSHGRRVKFYFATQVGTKPPTFVLFTNQPEGVHFSYER 411
Query: 417 YL 418
YL
Sbjct: 412 YL 413
>gi|71274603|ref|ZP_00650891.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa
Dixon]
gi|170730865|ref|YP_001776298.1| GTP-binding protein EngA [Xylella fastidiosa M12]
gi|238687938|sp|B0U489.1|DER_XYLFM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71164335|gb|EAO14049.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa
Dixon]
gi|71729319|gb|EAO31435.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa
Ann-1]
gi|167965658|gb|ACA12668.1| GTP-binding protein [Xylella fastidiosa M12]
Length = 465
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 174/421 (41%), Positives = 261/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI-GKKSFIIIDTGG 59
M P++ LVGRPNVGKSTLFN LT +RDALV + PG+TRDRHYG I G+ F ++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTLFNALTLTRDALVHDQPGVTRDRHYGVCRIDGQPLFAVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ + G+ +Q + A E+D+++F+V+ R+G D I +LRK QP +LVIN
Sbjct: 61 MVGK-EDGLAGATARQARLAAAEADVVLFVVNVREGASALDDDILAWLRKLSQPTLLVIN 119
Query: 120 KSENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++++ +F G + +SA + G+ + +E +L LP + E N
Sbjct: 120 KIDGVSDTTVHSEFAHYGFSDVVPVSAAHRQGLDDLIEQVLAW-LPERSI---GEALNED 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
S E I +A VG+PNVGKSTL+N LLGE R+I D PGTTRDSI E + +Y L+DTA
Sbjct: 176 S-ERIHIAFVGRPNVGKSTLVNRLLGEERMIVSDVPGTTRDSITVDLERDEFRYRLVDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +EKFS KTL++I + V +LLLDA + ++ QD + I ++G++L+V
Sbjct: 235 GLRRKSKVEEAVEKFSAFKTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ ++ + +KL F+++A +SA + + +I+ + S++
Sbjct: 295 AMNKWDGLATYQREQAEDLLSRKLGFVNWAEVVRLSAKHGSGLRELFRAIHRAHVSALRQ 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + PP + KLRY H G NPP ++HG RLK + + YKRYL
Sbjct: 355 FSTSEVNKALEIAYQTAPPPSIRGYVSKLRYVHPAGSNPPTFIVHGTRLKVLPDTYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|312128144|ref|YP_003993018.1| ribosome-associated gtpase enga [Caldicellulosiruptor
hydrothermalis 108]
gi|311778163|gb|ADQ07649.1| ribosome-associated GTPase EngA [Caldicellulosiruptor
hydrothermalis 108]
Length = 440
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 263/422 (62%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + +VGRPNVGKSTLFNRL R A+V + PG+TRDR GE +F +IDTGG
Sbjct: 1 MKPTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + I+ +M +Q + AI SD+IIF+VDG+ GL + D+ + N LR S +PIVL +NK
Sbjct: 61 EPYSEDIILKQMRRQAQFAIDMSDVIIFMVDGKTGLTDADREVANMLRTSKKPIVLAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+NI+ + +FYELG+ +P +SA +G G+ + L+ ++ + KE N
Sbjct: 121 IDNISQQAMIYEFYELGLSDPIAMSAEHGTGVGDVLDAVVN--------YLNKEGINEIE 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAI+GKPN GKS+L+N +LGE RVI D PGTTRD+I S FE+ LIDTAG
Sbjct: 173 EGTIKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRDAIDSTFEFEGIPITLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K ++ +E++S+++TL++I +++ I+LLD +N+S QD +A + YE+G+ IV
Sbjct: 233 LRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTENVSEQDAKVAGYAYEAGKGCIVA 292
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ +++ K I++KL+FL FA FISA + +E++ +VY +
Sbjct: 293 VNKWDAVEKDEKTADEYKKQIEEKLSFLKFAPVLFISAKTGFRVKKLLETVLYVYGNYTR 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T ++ L A + P K + K+ Y Q G+ PP I I N Y+RY
Sbjct: 353 RITTGQLNDVLAEATTIYQPPSDKGKQLKIYYMTQVGEKPPKIAIFVNSKDLFHFSYQRY 412
Query: 418 LE 419
+E
Sbjct: 413 IE 414
>gi|357417723|ref|YP_004930743.1| GTP-binding protein Der [Pseudoxanthomonas spadix BD-a59]
gi|355335301|gb|AER56702.1| GTP-binding protein Der [Pseudoxanthomonas spadix BD-a59]
Length = 466
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 259/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKK-SFIIIDTGG 59
M P++ LVGRPNVGKSTLFN LT +RDALV + PG+TRDR+YG + + F+++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTLFNALTRTRDALVHDQPGVTRDRNYGICRLDPEHPFVLVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +Q + A E+D+++FIVD R+G D I +LRK+ +P +LV+N
Sbjct: 61 IAGD-EQGLSGATARQARSAAAEADLVLFIVDAREGASALDDEILAWLRKTTRPTLLVLN 119
Query: 120 KSENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + ++ DF G + +SA + G+ LE ++ LP + T
Sbjct: 120 KIDGVDEDNARSDFARYGFTDVLTLSASHRQGLDELLE-VIHERLPEEGAGA----TLDE 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLG R+I + PGTTRDSI E + K Y L+DTA
Sbjct: 175 DPARMRIAFVGRPNVGKSTLVNRLLGAERMIASEVPGTTRDSIAVDLERDGKLYRLVDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR+ K E +EKFS++KTL++I + V +LLLDA + ++ QD ++ I ++GR+L+V
Sbjct: 235 GIRRKGKVEEAVEKFSIVKTLQAIEQCQVAVLLLDATEGVTDQDASVLGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + QR+ ++ + +KLNF+ +A ISA + + ++++ + S+
Sbjct: 295 AVNKWDGLTEYQRQQAESLLARKLNFVEWAEAVRISAKHGSGLRELFQAVHRAHASATKV 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + AL A + +PP + KLRY H GG+NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNTALEIAYEANPPPSIRGHVSKLRYVHPGGENPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|260072547|gb|ACX30447.1| Era/TrmE family GTP-binding protein [uncultured SUP05 cluster
bacterium]
gi|269468505|gb|EEZ80163.1| GTPase [uncultured SUP05 cluster bacterium]
Length = 469
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 182/423 (43%), Positives = 262/423 (61%), Gaps = 17/423 (4%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS---FIIIDTGG 59
PV+ LVGRPNVGKSTLFNRL+NSR ALV+++ GLTRDR Y E + S IIDTGG
Sbjct: 4 PVISLVGRPNVGKSTLFNRLSNSRQALVSDFEGLTRDRQYAEILLDDDSQTFVTIIDTGG 63
Query: 60 FEPE---VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVL 116
+ V GI Q A+ ESD+I FIV R G++ D I + LR+ + I+L
Sbjct: 64 LTGDDNIVDSGIQ----GQVLNALEESDVIYFIVSARDGVIGLDLEIASQLRRLKKDIIL 119
Query: 117 VINKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTN 176
V NK+E ++ S++ +FYELG+G P +ISA + GI + +++ L + LP ++ E
Sbjct: 120 VCNKAEGLDESLAAEFYELGLGEPRLISAEHSQGIGDLIDHTLPL-LPQATIEEEAE--- 175
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+E I VA++G+PNVGKSTLIN +LGE RV+ D PGTTRDSI FE +KY LID
Sbjct: 176 ---VEGIAVAVLGRPNVGKSTLINRILGEERVLAIDMPGTTRDSIYIPFEREGQKYTLID 232
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAGIRR+ T E IE FS+IK + ++ ++VVIL+LDA++ ++ QD + I + GR+L
Sbjct: 233 TAGIRRKRSTHEKIEIFSIIKAIDALDRSHVVILVLDAREGVTEQDATLLGMIADKGRAL 292
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
++ +NKWD + Q+ +K + KL+F+++A ++ISA+ + + I Y ++
Sbjct: 293 LIVINKWDGLDDYQKSEVKRKLDVKLSFVNYASVHYISALHGSGVGKLFAPIIKSYTNAS 352
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
STS + + L SA H P K R K++Y +Q PP + HGN L+ + N Y R
Sbjct: 353 TQHSTSTLNKILESANAGHQPPPVKGRRLKIKYVNQTDVFPPTLTFHGNHLQNVPNAYDR 412
Query: 417 YLE 419
YL+
Sbjct: 413 YLK 415
>gi|71732116|gb|EAO34172.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa
Ann-1]
Length = 465
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/421 (41%), Positives = 261/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI-GKKSFIIIDTGG 59
M P++ LVGRPNVGKSTLFN LT +RDALV + PG+TRDRHYG I G+ F ++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTLFNALTLTRDALVHDQPGVTRDRHYGVCRIDGQPLFAVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ + G+ +Q + A E+D+++F+V+ R+G D I +LRK QP +LVIN
Sbjct: 61 MVGK-EDGLAGATARQARLAAAEADVLLFVVNVREGASALDDDILAWLRKLSQPTLLVIN 119
Query: 120 KSENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++++ +F G + +SA + G+ + +E +L LP + E N
Sbjct: 120 KIDGVSDTTVHSEFAHYGFSDVVPVSAAHRQGLDDLIEQVLAW-LPERSI---GEAFNED 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
S E I +A VG+PNVGKSTL+N LLGE R+I D PGTTRDSI E + +Y L+DTA
Sbjct: 176 S-ERIHIAFVGRPNVGKSTLVNRLLGEERMIVSDVPGTTRDSITVDLERDEFRYRLVDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +EKFS KTL++I + V +LLLDA + ++ QD + I ++G++L+V
Sbjct: 235 GLRRKSKVEEAVEKFSAFKTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ ++ + +KL F+++A +SA + + +I+ + S++
Sbjct: 295 AMNKWDGLATYQREQAEDLLSRKLGFVNWAEVVRLSAKHGSGLRELFRAIHRAHVSALRQ 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + PP + KLRY H G NPP ++HG RLK + + YKRYL
Sbjct: 355 FSTSEVNKALEIAYQTAPPPSIRGHVSKLRYVHPAGSNPPTFIVHGTRLKVLPDTYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|302871345|ref|YP_003839981.1| ribosome-associated GTPase EngA [Caldicellulosiruptor obsidiansis
OB47]
gi|302574204|gb|ADL41995.1| ribosome-associated GTPase EngA [Caldicellulosiruptor obsidiansis
OB47]
Length = 440
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/424 (41%), Positives = 264/424 (62%), Gaps = 15/424 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + +VGRPNVGKSTLFNRL R A+V + PG+TRDR GE +F +IDTGG
Sbjct: 1 MKPTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGEAEWRGITFNVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + I+ +M +Q + AI SD+IIFIVDG+ GL + DK + N LR S +PIVL +NK
Sbjct: 61 EPYSEDIILKQMRRQAQFAIDMSDVIIFIVDGKTGLTDADKEVANMLRTSKKPIVLAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+NI+ + +FYELG+ +P +SA +G G+ + L+ ++ + I+
Sbjct: 121 IDNISQEPMIYEFYELGLSDPIAMSAEHGTGVGDVLDAVVNY----------LDNVGINE 170
Query: 180 IE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
IE IKVAI+GKPN GKS+L+N +LGE RVI D PGTTRD+I S FE+ LIDT
Sbjct: 171 IEENTIKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRDAIDSTFEFEGIPITLIDT 230
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RR++K ++ +E++S+++TL++I +++ I+LLD + +S QD +A + YE+G+ I
Sbjct: 231 AGLRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTEGVSEQDAKVAGYAYEAGKGCI 290
Query: 298 VCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
V VNKWD++ +++ K I++KL+FL FA FISA + +E++ +VY++
Sbjct: 291 VAVNKWDAVEKDEKTADEYKKQIEEKLSFLKFAPVLFISAKTGFRVKKLLETVLYVYENY 350
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T ++ L A + P K + K+ Y Q G+ PP I I N Y+
Sbjct: 351 TRRITTGQLNDVLAEATTIYQPPSDKGKQLKIYYMTQVGEKPPKIAIFVNSKDLFHFSYQ 410
Query: 416 RYLE 419
RY+E
Sbjct: 411 RYIE 414
>gi|289677942|ref|ZP_06498832.1| GTP-binding protein EngA, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 391
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 250/392 (63%), Gaps = 17/392 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKST+FNRLT +RDA+V + GLTRDR YGE +S+I+IDTGG
Sbjct: 1 MVPVIALVGRPNVGKSTMFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ +M +Q+ AI E+D+++F+VD R G D++I LRK + +V NK
Sbjct: 61 SGD-EHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKRNKRSYVVANK 119
Query: 121 SENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK------------ 167
+NI+ +++ +F +G+G+ ++ +G GI LE I E P +
Sbjct: 120 IDNIDENLARAEFSPMGLGDAIPVAGAHGRGISQMLE-IALREFPRDEDELEEGAEVEEV 178
Query: 168 --FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLF 225
+ K + IK+AI+G+PNVGKSTL+N +LGE+RVI YD PGTTRDSI F
Sbjct: 179 AEGQEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSIYIPF 238
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
E N +KY LIDTAG+R+R K E +EKFSV+KTL++I +ANVVI ++DA++ + D+N+
Sbjct: 239 ERNEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNL 298
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
F E+GR+L++ +NKWD + +R +K ++++L F+ FA +FISA+ + +
Sbjct: 299 LGFALEAGRALVIALNKWDGMTPGERDFVKIELERRLFFVDFADIHFISALHGTGVGNLY 358
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPP 377
+S+ + + S++ TSR+T+ L A+ H P
Sbjct: 359 QSVQNSFKSAVTRWPTSRLTQILEDAVSEHAP 390
>gi|325915367|ref|ZP_08177684.1| small GTP-binding protein domain/GTP-binding hypothetical protein
[Xanthomonas vesicatoria ATCC 35937]
gi|325538414|gb|EGD10093.1| small GTP-binding protein domain/GTP-binding hypothetical protein
[Xanthomonas vesicatoria ATCC 35937]
Length = 465
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 176/421 (41%), Positives = 261/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + ++ FI++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEQQPFIVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +Q + A E+D+++F+VDGR+G D I +LRK +P VLVIN
Sbjct: 61 IAGD-EEGLAGATARQARAAAGEADLVLFVVDGREGASSLDDEILAWLRKLARPTVLVIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G + +SA + GI LE + LP + E + +
Sbjct: 120 KIDGTDEETVRSEFARYGFSDVVALSAAHRQGIDELLEEV-GARLPEEG---SGELLD-N 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI E +N++Y LIDTA
Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDNRQYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFS KTL++I + V +L+LDA + ++ QD I I ++GR+L+V
Sbjct: 235 GLRRRGKVEEAVEKFSAFKTLQAIEQCQVAVLMLDATEGVTDQDATILGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+S+A ISA+ + + ++I+ + S+
Sbjct: 295 AINKWDGQSDYQRAQAEDLLSRKLGFVSWAEAVRISALHGSGMRELFQAIHRAHASATHE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEIAYETNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|222528757|ref|YP_002572639.1| GTP-binding protein EngA [Caldicellulosiruptor bescii DSM 6725]
gi|222455604|gb|ACM59866.1| small GTP-binding protein [Caldicellulosiruptor bescii DSM 6725]
Length = 440
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 262/422 (62%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + +VGRPNVGKSTLFNRL R A+V + PG+TRDR GE +F +IDTGG
Sbjct: 1 MKPTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + I+ +M +Q + AI SD+IIF+VDG+ GL + D+ + N LR S +PIVL +NK
Sbjct: 61 EPYSEDIILKQMRRQAQFAIDMSDVIIFMVDGKTGLTDADREVANMLRTSKKPIVLAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+NI+ + +FYELG+ +P +SA +G G+ + L+ ++ + KE N
Sbjct: 121 IDNISQQAMIYEFYELGLSDPIAMSAEHGTGVGDVLDAVVN--------YLNKEGINEIE 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAI+GKPN GKS+L+N +LGE RVI D PGTTRD+I S FE+ LIDTAG
Sbjct: 173 EGTIKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRDAIDSTFEFEGIPITLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K ++ +E++S+++TL++I +++ I+LLD +N+S QD +A + YE+G+ IV
Sbjct: 233 LRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTENVSEQDAKVAGYAYEAGKGCIVA 292
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ +++ K I++KL+FL FA FISA + +E++ +VY +
Sbjct: 293 VNKWDAVEKDEKTADEYKKQIEEKLSFLKFAPVLFISAKTGFRVKKLLETVLYVYGNYTR 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T ++ L A + P K + K+ Y Q + PP I I N Y+RY
Sbjct: 353 RITTGQLNDVLAEATTIYQPPSDKGKQLKIYYMTQVCEKPPKIAIFVNSKDLFHFSYQRY 412
Query: 418 LE 419
+E
Sbjct: 413 IE 414
>gi|387823993|ref|YP_005823464.1| GTP-binding protein EngA [Francisella cf. novicida 3523]
gi|328675592|gb|AEB28267.1| GTP-binding protein EngA [Francisella cf. novicida 3523]
Length = 465
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/424 (41%), Positives = 268/424 (63%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNSRDALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSRDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + LR+ + +V+V+NK
Sbjct: 61 SDK-DIGFDEFMAKQSQIAIDEANLVFFVVDGRAGLTAGDEYVAGLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ DFY G ISA + + ++ L + P ++++ T H
Sbjct: 120 VDGTEEEAAMADFYSFGFDKVFAISAAHRRNTQKLVDKFL--KKPLNEYYQDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + KY ++D
Sbjct: 178 EQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGHKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ VNKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAVNKWDGMTEEDRTQVKQDLKRKLFFLQDYVDIHFISALHGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|15837067|ref|NP_297755.1| GTP-binding protein EngA [Xylella fastidiosa 9a5c]
gi|26006743|sp|Q9PG37.1|DER_XYLFA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|9105311|gb|AAF83275.1|AE003896_12 GTP-binding protein [Xylella fastidiosa 9a5c]
Length = 465
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 171/421 (40%), Positives = 260/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI-GKKSFIIIDTGG 59
M P++ LVGRPNVGKSTLFN LT +RDALV + PG+TRDRHYG I G+ F ++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTLFNALTLTRDALVHDQPGVTRDRHYGVCRIDGQPLFAVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ + G+ +Q + A E+D+++F+V+ R+G+ D I +LRK QP +LVIN
Sbjct: 61 MVGK-EDGLAGATARQARLAAAEADVVLFVVNVREGVSALDDDILAWLRKLSQPTLLVIN 119
Query: 120 KSENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++++ +F G + +SA + G+ + +E +L LP + + +
Sbjct: 120 KIDGVSDATVHSEFAHYGFSDVVPVSAAHRQGLDDLIEQVLAW-LPERGIGEALD----E 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
E I +A VG+PNVGKSTL+N LLGE R+I D PGTTRDSI E + +Y L+DTA
Sbjct: 175 DSERIHIAFVGRPNVGKSTLVNRLLGEERMIVSDVPGTTRDSITVDLERDECRYRLVDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +EKFS KTL+ I + V +LLLDA + ++ QD + I ++G++L+V
Sbjct: 235 GLRRKSKVEEAVEKFSAFKTLQVIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ ++ + +KL F+++A +SA + + +I+ + S++
Sbjct: 295 AMNKWDGLGTYQREQAEDLLSRKLGFVNWAEVVRLSAKHGSGLRELFRAIHRAHVSALRQ 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + PP + KLRY H G NPP ++HG RLK + + YKRYL
Sbjct: 355 FSTSEVNKALEIAYQTAPPPSIRGHVSKLRYVHPAGSNPPTFIVHGTRLKVLPDTYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|385792371|ref|YP_005825347.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676517|gb|AEB27387.1| GTP-binding protein EngA [Francisella cf. novicida Fx1]
Length = 465
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 172/424 (40%), Positives = 271/424 (63%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNSRDALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSRDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + + LR+ + +V+V+NK
Sbjct: 61 SDK-DAGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVADLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + ++ +FY G ISA + + ++ L + P ++++ T H
Sbjct: 120 VDGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFL--KKPLNEYYQDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + +KY ++D
Sbjct: 178 EQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ +NKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAINKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALHGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|312134636|ref|YP_004001974.1| ribosome-associated gtpase enga [Caldicellulosiruptor owensensis
OL]
gi|311774687|gb|ADQ04174.1| ribosome-associated GTPase EngA [Caldicellulosiruptor owensensis
OL]
Length = 440
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/424 (41%), Positives = 264/424 (62%), Gaps = 15/424 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + +VGRPNVGKSTLFNRL R A+V + PG+TRDR GE +F +IDTGG
Sbjct: 1 MKPTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIIGETEWRGITFNVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + I+ +M +Q + A+ SD+IIFIVDG+ GL + D+ + N LR S +PIVL +NK
Sbjct: 61 EPYSEDIILKQMRRQAQFAVDMSDVIIFIVDGKTGLTDADREVANMLRASKKPIVLAVNK 120
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+NI+ + +FYELG+ +P +SA +G G+ + L+ ++ + I+
Sbjct: 121 IDNISQEPMIYEFYELGLSDPIAMSAEHGTGVGDVLDAVVNY----------LDNVGINE 170
Query: 180 IE--YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
IE IKVAI+GKPN GKS+L+N +LGE RVI D PGTTRD+I S FE+ LIDT
Sbjct: 171 IEESTIKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRDAIDSTFEFEGIPITLIDT 230
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RR++K ++ +E++S+++TL++I +++ I+LLD + +S QD IA + YE+G+ I
Sbjct: 231 AGLRRKSKIYDNVERYSMLRTLQAIERSDICIILLDGTEGVSEQDAKIAGYAYEAGKGCI 290
Query: 298 VCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD++ +++ K I++KL+FL FA FISA + +E+I +VY++
Sbjct: 291 IAVNKWDAVEKDEKTADEYKKQIEEKLSFLKFAPVLFISAKTGFRVKKLLETILYVYENY 350
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T ++ L A + P K + K+ Y Q G+ PP I I N Y+
Sbjct: 351 TRRITTGQLNDVLAEATTIYQPPSDKGKQLKIYYMTQVGEKPPKIAIFVNSKDLFHFSYQ 410
Query: 416 RYLE 419
RY+E
Sbjct: 411 RYIE 414
>gi|337754478|ref|YP_004646989.1| GTP-binding protein EngA [Francisella sp. TX077308]
gi|336446083|gb|AEI35389.1| GTP-binding protein EngA [Francisella sp. TX077308]
Length = 465
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 172/424 (40%), Positives = 271/424 (63%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNSRDALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSRDALVFDFEGVTRDRQYGQAKYDGLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + + LR+ + +V+V+NK
Sbjct: 61 SDQ-DAGFDEFMAKQSQMAIDEANLVFFVVDGRSGLTAGDEYVADLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + ++ DFY+ G +SA + + ++ L + P +++ T H
Sbjct: 120 VDGVEEESAMADFYKFGFEKVFSVSAAHRRNTQKLIDKFL--KKPLNEYYLDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + KY ++D
Sbjct: 178 EQLRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGHKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ +NKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y+ +
Sbjct: 298 VLAINKWDGMTEEDRNQVKQDLKRKLFFLEDYVDMHFISALHGTNVGHVFESIDTAYNCA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVNRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|95930679|ref|ZP_01313413.1| Small GTP-binding protein domain [Desulfuromonas acetoxidans DSM
684]
gi|95133331|gb|EAT14996.1| Small GTP-binding protein domain [Desulfuromonas acetoxidans DSM
684]
Length = 436
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 263/418 (62%), Gaps = 11/418 (2%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
V+ +VGRPNVGKSTLFNR+ R A+V +YPG+TRDR+Y + K F +IDTGGFEP
Sbjct: 3 VVAIVGRPNVGKSTLFNRILGERKAIVEDYPGVTRDRNYADVTRYDKPFTLIDTGGFEPV 62
Query: 64 VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE- 122
+ ++ +M +Q++ AI E+D+I+F++DGR GL D+ + LR+ +P++ V+NK +
Sbjct: 63 SEVRMLVQMREQSQLAIEEADVILFVMDGRDGLTPSDEEVAEMLRRVDKPVLFVVNKVDG 122
Query: 123 NINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY 182
+ + +FY LGI + + SA +G G+ + IL ELP K + S E
Sbjct: 123 DKQEEQAAEFYSLGIEHFFVTSAEHGRGMGELMAAILD-ELPEVKTVED------DSAE- 174
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
+++A++G+PNVGKS+L+N LLG RV+ T GTTRDS+ + F YNN++Y+LIDTAGIRR
Sbjct: 175 VRLAVIGRPNVGKSSLVNKLLGYERVVANPTAGTTRDSVDTPFTYNNQRYVLIDTAGIRR 234
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
+ K + +EK+SV++ LK + A+VV++++DA++ I+ QD+ IA + Y+ GR++++ VNK
Sbjct: 235 KGKVSQKLEKYSVVQALKGMDRAHVVMVVIDAEEGITEQDLTIAGYAYDRGRAVVLVVNK 294
Query: 303 WDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
WD++ + + + K + ++ + FLSFA F+SA+ + ME++ V +S
Sbjct: 295 WDTLTKDNQTMKKFTDEVRGQFKFLSFAPIMFVSALTGQRVAKIMETVEDVAQQFNRKIS 354
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T+ + R L A + HPP R KL Y Q PP I N+ K + Y+RYL
Sbjct: 355 TAELNRVLKQAEEAHPPAMYHGKRVKLFYITQTAVRPPSFTIFVNKEKGVHFSYRRYL 412
>gi|222055249|ref|YP_002537611.1| GTP-binding protein EngA [Geobacter daltonii FRC-32]
gi|254783155|sp|B9M914.1|DER_GEOSF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|221564538|gb|ACM20510.1| small GTP-binding protein [Geobacter daltonii FRC-32]
Length = 441
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 255/421 (60%), Gaps = 11/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKSTLFNRL R A+V + PG+TRDR+Y + FI+IDTGGF
Sbjct: 1 MKPLIAIVGRPNVGKSTLFNRLVGRRKAMVDDMPGVTRDRNYADVNRFDVPFILIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE ++ +M +Q++ A+ E+D+I+F++DGR GL D + LR+ +P+ V+NK
Sbjct: 61 EPETSDRLLQQMREQSQLAMDEADLILFVMDGRDGLTPADVEVVEMLRRVNKPVFYVVNK 120
Query: 121 SE-NINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + + + DFY LGI ISA + G+ + +E ++ LP K E
Sbjct: 121 IDGDRQENAAGDFYSLGIEQIFTISAEHNRGVNDLMEEVIA-ALPNKTAPAVDE------ 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++A++G+PNVGKSTL+N LLG RV+ TPGTTRDSI + F N K+Y+LIDTAG
Sbjct: 174 -EVTRIAVIGRPNVGKSTLVNRLLGVERVVANPTPGTTRDSIDTYFNCNKKRYLLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+ KT E IEK+SV+ +L+SI A+VV++++DA++ ++ QD IA + +E+GR I
Sbjct: 233 IRRKGKTTEKIEKYSVVDSLRSIERADVVLIVIDAEEGVTEQDTKIAGYAFEAGRGCIFV 292
Query: 300 VNKWDSIIHNQRK--IIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + I I+ + +L FA F+SA + M ++ V +
Sbjct: 293 VNKWDAISKDNASMGIFVEKIRMEFKYLPFAPIVFVSAKTGQRLGKIMTEVDSVMEQFAK 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+STS + R A++ H + R K +A Q G PP IVI NR + Y+RY
Sbjct: 353 RISTSDLNRVFSKAVEEHHAPLYQGRRVKFYFATQVGTKPPSIVIFTNRPDGVHFSYERY 412
Query: 418 L 418
+
Sbjct: 413 I 413
>gi|118497053|ref|YP_898103.1| GTP-binding protein EngA [Francisella novicida U112]
gi|194324288|ref|ZP_03058062.1| GTPase of unknown function family protein, putative [Francisella
novicida FTE]
gi|166198716|sp|A0Q534.1|DER_FRATN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|118422959|gb|ABK89349.1| GTP-binding protein [Francisella novicida U112]
gi|194321735|gb|EDX19219.1| GTPase of unknown function family protein, putative [Francisella
tularensis subsp. novicida FTE]
Length = 465
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 271/424 (63%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNSRDALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSRDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + + LR+ + +V+V+NK
Sbjct: 61 SDK-DVGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + ++ +FY G ISA + + ++ L + P ++++ T H
Sbjct: 120 VDGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFL--KKPLNEYYQDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + +KY ++D
Sbjct: 178 EQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ VNKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAVNKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALHGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|208780512|ref|ZP_03247852.1| GTPase of unknown function family protein, putative [Francisella
novicida FTG]
gi|254372413|ref|ZP_04987903.1| hypothetical protein FTCG_01637 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570141|gb|EDN35795.1| hypothetical protein FTCG_01637 [Francisella novicida GA99-3549]
gi|208743658|gb|EDZ89962.1| GTPase of unknown function family protein, putative [Francisella
novicida FTG]
Length = 465
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 270/424 (63%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNSRDALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSRDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + + LR+ + +V+V+NK
Sbjct: 61 SDK-DVGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVADLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ +FY G ISA + + ++ L + P ++++ T H
Sbjct: 120 VDGTEEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFL--KKPLNEYYQDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + +KY ++D
Sbjct: 178 EQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ VNKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAVNKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALHGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|289666002|ref|ZP_06487583.1| GTP-binding protein EngA [Xanthomonas campestris pv. vasculorum
NCPPB 702]
Length = 465
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 260/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + ++ FI++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEQQPFIVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +Q + A E+D+++F+VDGR+G D I +LRK +P VLVIN
Sbjct: 61 IAGD-EEGLAGATARQARAAAGEADLVLFVVDGREGASSLDDEILAWLRKLARPTVLVIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G + +SA + GI LE + LP + E + +
Sbjct: 120 KIDGTDEETVRSEFARYGFSDVVALSAAHRQGIDELLEEV-AARLPEEG---SGELLD-N 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDGRQYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFS KTL++I + V +L+LDA + ++ QD I I ++GR+L+V
Sbjct: 235 GLRRRGKVEEAVEKFSAFKTLQAIEQCQVAVLMLDATEGVTDQDATILGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+S+A ISA+ + + ++I+ + S+
Sbjct: 295 AINKWDGQSDYQRAQAEDLLSRKLGFVSWAEAVRISALHGSGMRELFQAIHRAHASATHE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEIAYETNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|254373886|ref|ZP_04989368.1| hypothetical protein FTDG_00040 [Francisella novicida GA99-3548]
gi|151571606|gb|EDN37260.1| hypothetical protein FTDG_00040 [Francisella novicida GA99-3548]
Length = 465
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 270/424 (63%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNSRDALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSRDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + + LR+ + +V+V+NK
Sbjct: 61 SDK-DVGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ +FY G ISA + + ++ L + P ++++ T H
Sbjct: 120 VDGTEEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFL--KKPLNEYYQDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + +KY ++D
Sbjct: 178 EQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ VNKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAVNKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALHGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|289670462|ref|ZP_06491537.1| GTP-binding protein EngA [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 465
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 260/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + ++ FI++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEQQPFIVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +Q + A E+D+++F+VDGR+G D I +LRK +P VLVIN
Sbjct: 61 IAGD-EEGLAGATARQARAAAGEADLVLFVVDGREGASSLDDEILAWLRKLARPTVLVIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G + +SA + GI LE + LP + E + +
Sbjct: 120 KIDGTDEETVRSEFARYGFSDVVALSAAHRQGIDELLEEV-GARLPEEG---SGELLD-N 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDGRQYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFS KTL++I + V +L+LDA + ++ QD I I ++GR+L+V
Sbjct: 235 GLRRRGKVEEAVEKFSAFKTLQAIEQCQVAVLMLDATEGVTDQDATILGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+S+A ISA+ + + ++I+ + S+
Sbjct: 295 AINKWDGQSDYQRAQAEDLLSRKLGFVSWAEAVRISALHGSGMRELFQAIHRAHASATHE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEIAYETNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|319787003|ref|YP_004146478.1| ribosome-associated GTPase EngA [Pseudoxanthomonas suwonensis 11-1]
gi|317465515|gb|ADV27247.1| ribosome-associated GTPase EngA [Pseudoxanthomonas suwonensis 11-1]
Length = 465
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/421 (41%), Positives = 262/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
M P++ LVGRPNVGKSTLFN LT SRDALV + PG+TRDRHYG + + F+++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTLFNALTRSRDALVHDEPGVTRDRHYGVCRLDPDRPFLLVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +Q + A E+D+I+F+VDGR+G D I ++LRK +P +LV+N
Sbjct: 61 IAGD-EEGLAGATARQARAAAAEADLILFVVDGREGTSALDDEILSWLRKLARPTLLVVN 119
Query: 120 KSEN-INSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + ++ +F G + +SA + G+ + +L LP + + E N
Sbjct: 120 KIDGTFEEAVRGEFARYGFADMLAVSAAHRQGLDDLHAEVLE-RLPEEGSVE--ELDN-- 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ +++A VG+PNVGKSTL+N +LGE R+I + PGTTRDSI E + + Y LIDTA
Sbjct: 175 DPDRLRIAFVGRPNVGKSTLVNRVLGEERMIASEVPGTTRDSIAVDLERDGRLYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR+ K E +EKFSV+KTL++I V +L+LDA + ++ QD + + ++GR+L++
Sbjct: 235 GIRRKGKIEEAVEKFSVVKTLQAIERCQVAVLMLDATEGVTDQDATVLGAVLDAGRALVI 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
VNKWD + QR+ + +++KL F+ +A ISA + + +I+ + S+I
Sbjct: 295 AVNKWDGLTTYQREQAEALLERKLGFVPWAEAVRISAKHGSGLRELFRAIHRAHASAIRT 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG+NPP V+HG RLK + + YKRYL
Sbjct: 355 FSTSEVNKALEIAAETNPPPSIRGHVSKLRYVHPGGENPPTFVVHGTRLKVLPDSYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|384419374|ref|YP_005628734.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353462287|gb|AEQ96566.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 465
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/421 (41%), Positives = 258/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDRHYG + ++ FI++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRHYGVCRLDEQQPFIVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ + G+ +Q + A E+D+++F+VDGR+G D I +LRK + VLVIN
Sbjct: 61 IAGD-EDGLAGATARQARAAAGEADLVLFVVDGREGASSLDDEILAWLRKLARQTVLVIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G N +SA + GI LE + LP + E + +
Sbjct: 120 KIDGTDEETVRSEFARYGFCNVVALSAAHRQGIDELLEEV-GARLPEEG---SGELLD-N 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDGRQYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFS KTL++I + V +L+LDA + ++ QD I I ++GR+L+V
Sbjct: 235 GLRRRGKVEEAVEKFSAFKTLQAIEQCQVAVLMLDATEGVTDQDATILGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+S+A ISA+ + + ++I+ + S+
Sbjct: 295 AINKWDGQSDYQRAQAEDLLSRKLGFVSWAEAVRISALHGSGMRELFQAIHRAHASATHE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEIAYETNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|21231435|ref|NP_637352.1| GTP-binding protein EngA [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768511|ref|YP_243273.1| GTP-binding protein EngA [Xanthomonas campestris pv. campestris
str. 8004]
gi|188991681|ref|YP_001903691.1| GTP-binding protein EngA [Xanthomonas campestris pv. campestris
str. B100]
gi|384427910|ref|YP_005637269.1| GTP-binding protein EngA [Xanthomonas campestris pv. raphani 756C]
gi|26006714|sp|Q8P979.1|DER_XANCP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|81305517|sp|Q4UUM0.1|DER_XANC8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|229807529|sp|B0RT56.1|DER_XANCB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|21113105|gb|AAM41276.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66573843|gb|AAY49253.1| GTP-binding protein [Xanthomonas campestris pv. campestris str.
8004]
gi|167733441|emb|CAP51642.1| GTP-binding protein, probable [Xanthomonas campestris pv.
campestris]
gi|341937012|gb|AEL07151.1| GTP-binding protein EngA [Xanthomonas campestris pv. raphani 756C]
Length = 465
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 261/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + ++ FI++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEQQPFIVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +Q + A E+D+++F+VDGR+G D I +LRK +P VLVIN
Sbjct: 61 IAGD-EEGLAGATARQARAAAGEADLVLFVVDGREGASSLDDEILAWLRKLARPTVLVIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + S+ +F G + +SA + GI + LE + LP + E + +
Sbjct: 120 KIDGTDEESVRSEFSRYGFSDVVALSAAHRQGIDDLLEEV-GARLPEEG---AGELLD-N 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDGRQYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFS KTL++I + V +L+LDA + ++ QD I I ++GR+L+V
Sbjct: 235 GLRRRGKVEEAVEKFSAFKTLQAIEQCQVAVLMLDATEGVTDQDATILGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+++A ISA+ + + ++I+ + S+
Sbjct: 295 AINKWDGQSDYQRAQAEDLLSRKLGFVNWAEAVRISALHGSGMRELFQAIHRAHASATHE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEIAYETNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|54113771|gb|AAV29519.1| NT02FT0401 [synthetic construct]
Length = 465
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 271/425 (63%), Gaps = 10/425 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNS DALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSVLVAIVGRANVGKSTLFNVLTNSYDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + + LR+ + +V+V+NK
Sbjct: 61 SDK-DVGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL--TIELPYKKFFKKKEF--T 175
+ + ++ +FY G ISA + + ++ L T+ Y+ + + +E
Sbjct: 120 VDGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFLKKTLNEYYQDYTQTQEHKEQ 179
Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
H I + +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + +KY ++
Sbjct: 180 QRHGIHF---SLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIV 236
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+
Sbjct: 237 DTAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRA 296
Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDS 354
L++ VNKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y
Sbjct: 297 LVLAVNKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALHGTNVGHVFESIDTAYAC 356
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ ++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N Y
Sbjct: 357 ASKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSY 416
Query: 415 KRYLE 419
KRYLE
Sbjct: 417 KRYLE 421
>gi|325919426|ref|ZP_08181452.1| small GTP-binding protein domain/GTP-binding conserved hypothetical
protein [Xanthomonas gardneri ATCC 19865]
gi|325550092|gb|EGD20920.1| small GTP-binding protein domain/GTP-binding conserved hypothetical
protein [Xanthomonas gardneri ATCC 19865]
Length = 465
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/421 (41%), Positives = 259/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGK-KSFIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + + + FI++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEERPFIVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +Q + A E+D+++F+VDGR+G D I +LRK +P VLVIN
Sbjct: 61 IAGD-EEGLAGATARQARAAAGEADLVLFVVDGREGASSLDDEILAWLRKLARPTVLVIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G + +SA + GI LE + LP + E +
Sbjct: 120 KIDGTDEETVRSEFARYGFSDVVALSAAHRQGIDELLEEV-GARLPAEG---AGELLDTD 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI + + ++Y LIDTA
Sbjct: 176 PAR-VRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDMDRDGRQYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFS KTL++I + V +L+LDA + ++ QD I I ++GR+L+V
Sbjct: 235 GLRRRGKVEEAVEKFSAFKTLQAIEQCQVAVLMLDAGEGVTDQDATILGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+S+A ISA+ + + ++I+ + S+
Sbjct: 295 AINKWDGQSDYQRAQAEDLLSRKLGFVSWAEAVRISALHGSGMRELFQAIHRAHASATHE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEIAYETNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|296133088|ref|YP_003640335.1| ribosome-associated GTPase EngA [Thermincola potens JR]
gi|296031666|gb|ADG82434.1| ribosome-associated GTPase EngA [Thermincola potens JR]
Length = 440
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 273/422 (64%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFNR+ SR A+V + PG+TRDR Y + K F ++DTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNRIAGSRIAIVEDKPGVTRDRIYKDAVWLDKEFTLVDTGGIE 62
Query: 62 PEVKKGIMHEMT-KQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
KG M ++ +Q + AI E+++I+F+VD R GL D+ + LR + +P++LV NK
Sbjct: 63 FRDDKGSMSDLILQQARLAIEEAEVILFVVDARSGLTATDEEVARMLRNTKKPVILVANK 122
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E+ ++ + DFY LG+G+P ++SA +G + + L+ ++ LP + +E+ +
Sbjct: 123 VEDFTGNMDVYDFYRLGLGDPIMVSASHGLNVGDLLDEVVK-HLPE---YAAEEYGD--- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK+A++G+PNVGKS+++N+LLGE RVI D GTTRD+I + FE ++Y+LIDTAG
Sbjct: 176 -DVIKIAVIGRPNVGKSSIVNALLGEERVIVSDVAGTTRDAIDTYFERGGQRYLLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R++ K E E++SV+++LK++ ++VV++++DAQ+ ++ QD IA + +E+G+++++
Sbjct: 235 MRKKGKIDEPTERYSVLRSLKAVDRSDVVLMIIDAQEVVTEQDKKIAGYAHEAGKAMVLV 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + ++ I+++L F+ +A F+SA+ + ++ +N+V + +
Sbjct: 295 VNKWDLIKKDDKTTLRYTEEIRQELGFVQYAPVIFVSALTWQRVPRILDLVNYVAEQHAM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+STS + + A++ +PP K R K+ Y Q G PP +I N + + Y+RY
Sbjct: 355 RVSTSNLNDLVQEAVRLNPPPSDKGRRLKILYITQAGVKPPTFIIFVNDPELMHFSYQRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|346722769|ref|YP_001179705.2| GTP-binding protein Der [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|380865375|sp|A4XHX9.2|DER_CALS8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|345106740|gb|ABP66514.2| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 439
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 263/422 (62%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP + +VGRPNVGKSTLFNRL R A+V + PG+TRDR GE +F +IDTGG
Sbjct: 1 MKPTVAIVGRPNVGKSTLFNRLIGERRAIVDDTPGITRDRIVGETEWRGITFNVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + I+ +M +Q + AI SD+IIF+VDG+ GL + D+ + N LR S +PIVL +NK
Sbjct: 61 EPYSEDIILKQMRRQAQFAIDMSDVIIFMVDGKTGLTDADREVANMLRVSKKPIVLAVNK 120
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+NI+ I +FYELG+ +P +SA +G+G+ + L+ +++ +F K I
Sbjct: 121 IDNISEQPIIYEFYELGLSDPIPMSAEHGSGVGDVLDAVVS-------YFDKVGINEIEE 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IKVAI+GKPN GKS+L+N +LGE RVI D PGTTRD+I S E+ LIDTAG
Sbjct: 174 -DSIKVAIIGKPNTGKSSLVNYILGEERVIVSDIPGTTRDAIDSYVEFEGIPLTLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K ++ IE++S+++T+ +I +++ ++LLD + +S QD IA + YE+G+ I+
Sbjct: 233 LRRKSKIYDNIERYSMLRTISAIERSDICVILLDGTEPVSEQDAKIAGYAYEAGKGCIIA 292
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ +++ K I++KL+FL FA FISA + +E++ +VY +
Sbjct: 293 VNKWDAVEKDEKTADEYKKQIEEKLSFLKFAPVLFISAKTGFRVKKLLETVLYVYGNYTR 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T +I L A + P K + K+ Y Q G+ PP + I N Y+RY
Sbjct: 353 RITTGQINDVLAEATTIYQPPSDKGKQLKIYYMTQVGEKPPKMAIFVNDKDLFHFSYQRY 412
Query: 418 LE 419
+E
Sbjct: 413 IE 414
>gi|56708364|ref|YP_170260.1| GTP-binding protein EngA [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110670834|ref|YP_667391.1| GTP-binding protein EngA [Francisella tularensis subsp. tularensis
FSC198]
gi|254370986|ref|ZP_04986989.1| hypothetical protein FTBG_01608 [Francisella tularensis subsp.
tularensis FSC033]
gi|254875187|ref|ZP_05247897.1| GTP-binding protein engA [Francisella tularensis subsp. tularensis
MA00-2987]
gi|379717597|ref|YP_005305933.1| GTP-binding protein EngA [Francisella tularensis subsp. tularensis
TIGB03]
gi|379726201|ref|YP_005318387.1| GTP-binding protein EngA [Francisella tularensis subsp. tularensis
TI0902]
gi|385795446|ref|YP_005831852.1| GTP-binding protein EngA [Francisella tularensis subsp. tularensis
NE061598]
gi|421755959|ref|ZP_16192892.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
80700075]
gi|81820765|sp|Q5NFD2.1|DER_FRATT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123169321|sp|Q14GT5.1|DER_FRAT1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56604856|emb|CAG45939.1| GTP-binding protein [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110321167|emb|CAL09322.1| GTP-binding protein [Francisella tularensis subsp. tularensis
FSC198]
gi|151569227|gb|EDN34881.1| hypothetical protein FTBG_01608 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841186|gb|EET19622.1| GTP-binding protein engA [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159981|gb|ADA79372.1| GTP-binding protein EngA [Francisella tularensis subsp. tularensis
NE061598]
gi|377827650|gb|AFB80898.1| GTP-binding protein EngA [Francisella tularensis subsp. tularensis
TI0902]
gi|377829274|gb|AFB79353.1| GTP-binding protein EngA [Francisella tularensis subsp. tularensis
TIGB03]
gi|409086668|gb|EKM86783.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
80700075]
Length = 465
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 271/425 (63%), Gaps = 10/425 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNS DALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSYDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + + LR+ + +V+V+NK
Sbjct: 61 SDK-DVGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENIL--TIELPYKKFFKKKEF--T 175
+ + ++ +FY G ISA + + ++ L T+ Y+ + + +E
Sbjct: 120 VDGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFLKKTLNEYYQDYTQTQEHKEQ 179
Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
H I + +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + +KY ++
Sbjct: 180 QRHGIHF---SLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIV 236
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+
Sbjct: 237 DTAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRA 296
Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDS 354
L++ VNKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y
Sbjct: 297 LVLAVNKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALHGTNVGHVFESIDTAYAC 356
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ ++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N Y
Sbjct: 357 ASKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSY 416
Query: 415 KRYLE 419
KRYLE
Sbjct: 417 KRYLE 421
>gi|421757136|ref|ZP_16194021.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
80700103]
gi|409092865|gb|EKM92829.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
80700103]
Length = 465
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/424 (40%), Positives = 270/424 (63%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNS DALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSHDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + + LR+ + +V+V+NK
Sbjct: 61 SDK-DVGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + ++ +FY G ISA + + ++ L + P ++++ T H
Sbjct: 120 VDGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFL--KKPLNEYYQDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + +KY ++D
Sbjct: 178 EQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ VNKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAVNKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALHGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|134301774|ref|YP_001121742.1| GTP-binding protein EngA [Francisella tularensis subsp. tularensis
WY96-3418]
gi|421751557|ref|ZP_16188599.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
AS_713]
gi|421753409|ref|ZP_16190404.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
831]
gi|421758997|ref|ZP_16195834.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
70102010]
gi|424674317|ref|ZP_18111238.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
70001275]
gi|166198717|sp|A4IXH0.1|DER_FRATW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|134049551|gb|ABO46622.1| GTP-binding protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409087232|gb|EKM87334.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
AS_713]
gi|409087256|gb|EKM87357.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
831]
gi|409091485|gb|EKM91482.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
70102010]
gi|417435120|gb|EKT90044.1| GTP-binding protein Der [Francisella tularensis subsp. tularensis
70001275]
Length = 465
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/424 (40%), Positives = 270/424 (63%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNS DALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSHDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + + LR+ + +V+V+NK
Sbjct: 61 SDK-DVGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + ++ +FY G ISA + + ++ L + P ++++ T H
Sbjct: 120 VDGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFL--KKPLNEYYQDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + +KY ++D
Sbjct: 178 EQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ VNKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAVNKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALHGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|406967269|gb|EKD92393.1| hypothetical protein ACD_29C00028G0001 [uncultured bacterium]
Length = 451
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 257/422 (60%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV V++GRPNVGKSTLFNRLT +R+A+V++ PG+TRDR YG G I FI++DTGG
Sbjct: 1 MLPVFVIIGRPNVGKSTLFNRLTKTRNAIVSDQPGVTRDRQYGSGEIENHRFIVVDTGGI 60
Query: 61 -EPEVKKGIMHEMTK-QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRK-SGQPIVLV 117
EP+ IM EMT+ Q K A+ E+D+I+F+VD GL D I LR S + I LV
Sbjct: 61 AEPD--DPIMSEMTEIQVKSALSEADVILFLVDALAGLSTGDYAIAKRLRHFSHKKIALV 118
Query: 118 INKSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTN 176
+NK+E + I+ +FYELG + + ISA GI+ + +++ E P +
Sbjct: 119 VNKAEREQADIANSEFYELGFAHLYTISANINRGIEKMMLDLMR-EYPASS----SDDAA 173
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ ++AI+G+PNVGKSTL+N LLGE+RVI D PGTTRD I ++ + KKY LID
Sbjct: 174 LEDQSRTRIAILGRPNVGKSTLVNRLLGEDRVIVLDRPGTTRDCIAIPYDRHGKKYTLID 233
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAGIR+RNK +E FSVIK ++++ +A+VVIL+LDA+ + QD+ + FI E+G
Sbjct: 234 TAGIRQRNKMESAVETFSVIKAMQAMAKADVVILVLDARSGVIEQDLRLLGFILEAGVPF 293
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
I+ NKWD + R K N+ ++L F +A +ISA+ + +I+ + +
Sbjct: 294 ILAFNKWDHMDEYDRNEFKRNVDRRLVFADYARQYYISALHGTAVGELYAAIDEIQKAMS 353
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
T + R L+ A ++H P R KLRYAH G ++P VIHG ++ + + YK
Sbjct: 354 QDFETPLLVRILMQATEDHQPPLVSGRRIKLRYAHLGDRHPLTFVIHGKQVDSLPDSYKN 413
Query: 417 YL 418
YL
Sbjct: 414 YL 415
>gi|89255825|ref|YP_513187.1| GTP-binding protein EngA [Francisella tularensis subsp. holarctica
LVS]
gi|115314316|ref|YP_763039.1| GTP-binding protein EngA [Francisella tularensis subsp. holarctica
OSU18]
gi|156501805|ref|YP_001427870.1| GTP-binding protein EngA [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254367186|ref|ZP_04983217.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257]
gi|254367192|ref|ZP_04983222.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257]
gi|254368682|ref|ZP_04984696.1| hypothetical protein FTAG_01704 [Francisella tularensis subsp.
holarctica FSC022]
gi|290953028|ref|ZP_06557649.1| GTP-binding protein EngA [Francisella tularensis subsp. holarctica
URFT1]
gi|422938297|ref|YP_007011444.1| GTP-binding protein EngA [Francisella tularensis subsp. holarctica
FSC200]
gi|423050150|ref|YP_007008584.1| GTP-binding protein Der [Francisella tularensis subsp. holarctica
F92]
gi|122325651|sp|Q0BND2.1|DER_FRATO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|122501151|sp|Q2A515.1|DER_FRATH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166198715|sp|A7NAB1.1|DER_FRATF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|89143656|emb|CAJ78854.1| GTP-binding protein [Francisella tularensis subsp. holarctica LVS]
gi|115129215|gb|ABI82402.1| GTP-binding protein [Francisella tularensis subsp. holarctica
OSU18]
gi|134253007|gb|EBA52101.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257]
gi|134253012|gb|EBA52106.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257]
gi|156252408|gb|ABU60914.1| GTP-binding protein [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121597|gb|EDO65774.1| hypothetical protein FTAG_01704 [Francisella tularensis subsp.
holarctica FSC022]
gi|407293448|gb|AFT92354.1| GTP-binding protein EngA [Francisella tularensis subsp. holarctica
FSC200]
gi|421950872|gb|AFX70121.1| GTP-binding protein Der [Francisella tularensis subsp. holarctica
F92]
Length = 465
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 172/424 (40%), Positives = 270/424 (63%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNS DALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSHDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + + LR+ + +V+V+NK
Sbjct: 61 SDK-DVGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + ++ +FY G ISA + + ++ L + P ++++ T H
Sbjct: 120 VDGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFL--KKPLNEYYQDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + +KY ++D
Sbjct: 178 EQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ VNKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAVNKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALYGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ TR + A++ H P R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATRLMQLAVEAHSPPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|148265177|ref|YP_001231883.1| GTP-binding protein EngA [Geobacter uraniireducens Rf4]
gi|189037149|sp|A5G692.1|DER_GEOUR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|146398677|gb|ABQ27310.1| small GTP-binding protein [Geobacter uraniireducens Rf4]
Length = 441
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 168/421 (39%), Positives = 253/421 (60%), Gaps = 11/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M+P++ +VGRPNVGKSTLFNR+ R A+V + PG+TRDR+Y FI+IDTGGF
Sbjct: 1 MRPLIAIVGRPNVGKSTLFNRIVGRRKAMVDDMPGVTRDRNYANVDRFDVPFILIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE ++ +M +Q++ A+ E+D+I+F++DGR GL D + LR+ +PI +INK
Sbjct: 61 EPETNDRLLQQMREQSQLAMAEADVILFVMDGRDGLTPADVEVVEMLRRVDKPIFYLINK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ DFY LG+ +SA + G+ + ++ ++ LP E
Sbjct: 121 IDGDKQETAIGDFYTLGVDTIFTVSAEHNRGVNDLMDEVIK-ALPKGSAADTDE------ 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E K+A++G+PNVGKSTL+N LLG RV+ TPGTTRDSI + F N K+Y+LIDTAG
Sbjct: 174 -EVTKIAVIGRPNVGKSTLVNRLLGIERVVANPTPGTTRDSIDTYFTCNRKRYLLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+ KT E IEK+SV+ +L+SI A+VV++++DA++ ++ QD IA + YE+GR I
Sbjct: 233 IRRKGKTTEKIEKYSVVDSLRSIERADVVLIVIDAEEGVTEQDTKIAGYAYEAGRGCIFV 292
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ + + K I+ + +L FA F+SA + M ++ V +
Sbjct: 293 VNKWDTLTKDNASMGKFIEKIRMEFKYLPFAPIVFVSAKTGQRLGKIMTEVDAVMEQFAR 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++TS + R +A + H + R K +A Q G PP IVI NR + Y+RY
Sbjct: 353 RITTSDLNRVFSTATEEHHAPLYQGRRVKFYFATQVGTKPPSIVIFTNRPDGVHFSYERY 412
Query: 418 L 418
+
Sbjct: 413 I 413
>gi|84624044|ref|YP_451416.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|161898989|ref|YP_201168.2| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|188576711|ref|YP_001913640.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188576902|ref|YP_001913831.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae PXO99A]
gi|123752759|sp|Q2P2T5.1|DER_XANOM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|84367984|dbj|BAE69142.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188521163|gb|ACD59108.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521354|gb|ACD59299.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 465
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 258/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + ++ FI++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEQQPFIVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ + G+ +Q + A E+D+++F+VDGR+G D I +LRK +P VLVIN
Sbjct: 61 IAGD-EDGLAGATARQARAAAGEADLVLFVVDGREGESSLDDEILAWLRKLARPTVLVIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G + +SA + GI LE + LP + E + +
Sbjct: 120 KIDGTDEETVRSEFARYGFSDVVALSAAHRQGIDELLEEV-GARLPEEG---SGELLD-N 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDGRQYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFS KTL++I V +L+LDA + ++ QD I I ++GR+L+V
Sbjct: 235 GLRRRGKVEEAVEKFSAFKTLQAIERCQVAVLMLDATEGVTDQDATILGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+S+A ISA+ + + ++I+ + S+
Sbjct: 295 AINKWDGQSDYQRAQAEDLLSRKLGFVSWAEAVRISALHGSGMRELFQAIHRAHASATHE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEIAYETNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|58426746|gb|AAW75783.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 490
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 258/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + ++ FI++DTGG
Sbjct: 26 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEQQPFIVVDTGG 85
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ + G+ +Q + A E+D+++F+VDGR+G D I +LRK +P VLVIN
Sbjct: 86 IAGD-EDGLAGATARQARAAAGEADLVLFVVDGREGESSLDDEILAWLRKLARPTVLVIN 144
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G + +SA + GI LE + LP + E + +
Sbjct: 145 KIDGTDEETVRSEFARYGFSDVVALSAAHRQGIDELLEEV-GARLPEEG---SGELLD-N 199
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI E + ++Y LIDTA
Sbjct: 200 DPARVRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDGRQYRLIDTA 259
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFS KTL++I V +L+LDA + ++ QD I I ++GR+L+V
Sbjct: 260 GLRRRGKVEEAVEKFSAFKTLQAIERCQVAVLMLDATEGVTDQDATILGAILDAGRALVV 319
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+S+A ISA+ + + ++I+ + S+
Sbjct: 320 AINKWDGQSDYQRAQAEDLLSRKLGFVSWAEAVRISALHGSGMRELFQAIHRAHASATHE 379
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 380 FSTSEVNQALEIAYETNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYL 439
Query: 419 E 419
E
Sbjct: 440 E 440
>gi|210612261|ref|ZP_03289209.1| hypothetical protein CLONEX_01409 [Clostridium nexile DSM 1787]
gi|210151635|gb|EEA82642.1| hypothetical protein CLONEX_01409 [Clostridium nexile DSM 1787]
Length = 442
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 260/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN L ++V + PG+TRDR Y E K F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYAEVTWLDKEFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ K I+ +M +Q + AI +D+I+FI D RQGLV+ D + + LR+SG+P+VLV+NK
Sbjct: 63 PDSKDIILSQMREQAQIAIDTADVIVFITDVRQGLVDADSKVADMLRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LGIG+P ISA GI + L+ ++ KFF ++ T
Sbjct: 123 DSFQKLMPDVYEFYNLGIGDPIPISAASRLGIGDMLDEVV-------KFFPERNATE-EE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++AIVGKPNVGKS+++N LLGENRVI D GTTRD+I + +Y+ K+Y+ IDTAG
Sbjct: 175 DERPRIAIVGKPNVGKSSIVNKLLGENRVIVSDVAGTTRDAIDTAIKYHGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + I+ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVLMVIDAVEGITEQDAKIAGIAHERGKGIIIV 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + + + + I++ L ++ +A ++SA +N E I+ V ++ +
Sbjct: 295 VNKWDAIEKHDKTMYEYEKKIRQTLAYMPYAEIMYVSAATGQRLNKLYEMIDVVMENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RVATGVLNEIMAEAVAMQQPPSDKGKRLKLYYITQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|359411359|ref|ZP_09203824.1| GTP-binding protein engA [Clostridium sp. DL-VIII]
gi|357170243|gb|EHI98417.1| GTP-binding protein engA [Clostridium sp. DL-VIII]
Length = 438
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/421 (41%), Positives = 259/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFNRL R ++V + PG+TRDR Y E SF +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNRLAGKRISIVQDTPGVTRDRVYAEAEWLNYSFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q AI +D+I+FIVDG++GL D + LRKS +P+VLV+NK
Sbjct: 63 PERDDIIVKQMRRQANIAIETADVIVFIVDGKEGLTPADNEVAAMLRKSKKPVVLVVNKV 122
Query: 122 ENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+++ + +FY LGIG+P ISA G G+ + L+ + +E K ++++E
Sbjct: 123 DSLKEEDNAWEFYNLGIGDPVTISASQGLGLGDMLDKV--VENIDKSVYEEEED------ 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYI++A++GKPNVGKS+LIN LLGE RVI D PGTTRD+I S E N K+ILIDTAG+
Sbjct: 175 EYIRIAMIGKPNVGKSSLINKLLGEERVIVSDVPGTTRDAIDSYLETENGKFILIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SV++T +I A+V IL++DA + I+ QD I + +E ++++V V
Sbjct: 235 RRKSKVKEEIERYSVVRTYAAIERADVCILMIDATEGITEQDEKIIGYAHEMRKAIMVIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K ++++ L FLS+A + FISA+ + ++ + YD+
Sbjct: 295 NKWDLVEKDDKTLDKFKKDLQQNLKFLSYAEYLFISALTGQRVGKVLDIAKYCYDNYNKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + A+ P L R K+ Y Q PP V N Y+RYL
Sbjct: 355 ISTGILNDVISKAVLMKEPPVVSLKRMKIYYVTQVATRPPKFVFFVNDESTRQFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|78047628|ref|YP_363803.1| GTP-binding protein EngA [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|123743974|sp|Q3BTW0.1|DER_XANC5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|78036058|emb|CAJ23749.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
Length = 465
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 260/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + ++ FI++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEQQPFIVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +Q + A E+D+++F+VDGR+G D I +LRK +P VLVIN
Sbjct: 61 IAGD-EEGLAGATARQARAAAGEADLVLFVVDGREGASSLDDEILAWLRKLARPTVLVIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G + +SA + GI L+ + LP + E + +
Sbjct: 120 KIDGTDEETVRSEFARYGFSDVVALSAAHRQGIDELLDEV-GARLPEEG---AGELLD-N 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDGRQYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFS KTL++I + V +L+LDA + ++ QD I I ++GR+L+V
Sbjct: 235 GLRRRGKVEEAVEKFSAFKTLQAIEQCQVAVLMLDATEGVTDQDATILGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+++A ISA+ + + ++I+ + S+
Sbjct: 295 AINKWDGQSDYQRAQAEDLLSRKLGFVNWAEAVRISALHGSGMRELFQAIHRAHASATHE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEIAYETNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|333979257|ref|YP_004517202.1| GTP-binding protein engA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822738|gb|AEG15401.1| GTP-binding protein engA [Desulfotomaculum kuznetsovii DSM 6115]
Length = 437
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 261/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFNRL SR A+V + PG+TRDR Y + + F ++DTGG +
Sbjct: 3 KPIVAIVGRPNVGKSTLFNRLVGSRIAIVEDEPGITRDRLYQDAEWAGRVFTLVDTGGLD 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
I ++ +Q + AI E+D+++F+VD R GL D+ + LR++ +P++LV NK
Sbjct: 63 FVESGDIPRQVRRQVELAIEEADVVLFLVDARAGLTSTDEDVAALLRRTKKPVLLVANKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
EN + L DFY LG+G P ISA G + L+ ++++ P +
Sbjct: 123 ENFQRTGQLVDFYRLGLGEPIPISAAQGMNTGDLLDRLVSVLPP--------DAAEEEEP 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I++A++G+PNVGKS+L+N++LGE RVI + PGTTRD+I + FE ++Y+L+DTAGI
Sbjct: 175 DTIRIAVIGRPNVGKSSLVNAILGEQRVIVSEIPGTTRDAIDTYFEREGRRYMLVDTAGI 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+++ E +E++SVI++L+++ V +++LDA + ++ QD IA + +E G++ ++ V
Sbjct: 235 RRKSRIEEAVERYSVIRSLRAVDRCEVALVVLDALEGVTDQDKRIAGYAHEQGKASVLVV 294
Query: 301 NKWDSIIHNQRKIIKNN--IKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + R + I+++L F+++A FISA+ + +E ++ V +
Sbjct: 295 NKWDLVEKDNRTTQRFTELIRRELAFMTYAPAVFISALTGKRVPRLLEMVDLVAQQQCLR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+STS + R + A+ ++PP K R K+ YA QGG PP ++ N + + Y RYL
Sbjct: 355 ISTSDLNRLIRDAVMHNPPPADKNRRLKILYATQGGVKPPTFILFVNDPELMHFSYLRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|21242765|ref|NP_642347.1| GTP-binding protein EngA [Xanthomonas axonopodis pv. citri str.
306]
gi|325927625|ref|ZP_08188854.1| small GTP-binding protein domain/GTP-binding hypothetical protein
[Xanthomonas perforans 91-118]
gi|346724949|ref|YP_004851618.1| GTP-binding protein EngA [Xanthomonas axonopodis pv. citrumelo F1]
gi|381170012|ref|ZP_09879173.1| ribosome-associated GTPase EngA [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|390991324|ref|ZP_10261592.1| ribosome-associated GTPase EngA [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|418517491|ref|ZP_13083654.1| GTP-binding protein Der [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|418521388|ref|ZP_13087432.1| GTP-binding protein Der [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|26006715|sp|Q8PKY6.1|DER_XANAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|21108245|gb|AAM36883.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306]
gi|325541992|gb|EGD13505.1| small GTP-binding protein domain/GTP-binding hypothetical protein
[Xanthomonas perforans 91-118]
gi|346649696|gb|AEO42320.1| GTP-binding protein EngA [Xanthomonas axonopodis pv. citrumelo F1]
gi|372553976|emb|CCF68567.1| ribosome-associated GTPase EngA [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|380689535|emb|CCG35660.1| ribosome-associated GTPase EngA [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|410702563|gb|EKQ61066.1| GTP-binding protein Der [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410705869|gb|EKQ64336.1| GTP-binding protein Der [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 465
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 260/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + ++ FI++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEQQPFIVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +Q + A E+D+++F+VDGR+G D I +LRK +P VLVIN
Sbjct: 61 IAGD-EEGLAGATARQARAAAGEADLVLFVVDGREGASSLDDEILAWLRKLARPTVLVIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G + +SA + GI L+ + LP + E + +
Sbjct: 120 KIDGTDEETVRSEFARYGFSDVVALSAAHRQGIDELLDEV-GARLPEEG---AGELLD-N 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDGRQYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFS KTL++I + V +L+LDA + ++ QD I I ++GR+L+V
Sbjct: 235 GLRRRGKVEEAVEKFSAFKTLQAIEQCQVAVLMLDATEGVTDQDATILGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+++A ISA+ + + ++I+ + S+
Sbjct: 295 AINKWDGQSDYQRAQAEDLLSRKLGFVNWAEAVRISALHGSGMRELFQAIHRAHASATHE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEIAYETNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|18310737|ref|NP_562671.1| GTP-binding protein EngA [Clostridium perfringens str. 13]
gi|110798819|ref|YP_696441.1| GTP-binding protein EngA [Clostridium perfringens ATCC 13124]
gi|110803315|ref|YP_699041.1| GTP-binding protein EngA [Clostridium perfringens SM101]
gi|168207282|ref|ZP_02633287.1| putative GTP-binding protein Era [Clostridium perfringens E str.
JGS1987]
gi|168210612|ref|ZP_02636237.1| putative GTP-binding protein Era [Clostridium perfringens B str.
ATCC 3626]
gi|168214232|ref|ZP_02639857.1| putative GTP-binding protein Era [Clostridium perfringens CPE str.
F4969]
gi|168217042|ref|ZP_02642667.1| putative GTP-binding protein Era [Clostridium perfringens NCTC
8239]
gi|169342731|ref|ZP_02863772.1| putative GTP-binding protein Era [Clostridium perfringens C str.
JGS1495]
gi|182625851|ref|ZP_02953617.1| putative GTP-binding protein Era [Clostridium perfringens D str.
JGS1721]
gi|422346425|ref|ZP_16427339.1| GTPase Der [Clostridium perfringens WAL-14572]
gi|422874675|ref|ZP_16921160.1| GTP-binding protein Der [Clostridium perfringens F262]
gi|26006720|sp|Q8XJK1.1|DER_CLOPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123148666|sp|Q0TPJ9.1|DER_CLOP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|123341699|sp|Q0SS66.1|DER_CLOPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|18145418|dbj|BAB81461.1| probable GTP binding protein [Clostridium perfringens str. 13]
gi|110673466|gb|ABG82453.1| ribosome-associated GTPase EngA [Clostridium perfringens ATCC
13124]
gi|110683816|gb|ABG87186.1| ribosome-associated GTPase EngA [Clostridium perfringens SM101]
gi|169299237|gb|EDS81307.1| putative GTP-binding protein Era [Clostridium perfringens C str.
JGS1495]
gi|170661368|gb|EDT14051.1| putative GTP-binding protein Era [Clostridium perfringens E str.
JGS1987]
gi|170711316|gb|EDT23498.1| putative GTP-binding protein Era [Clostridium perfringens B str.
ATCC 3626]
gi|170714259|gb|EDT26441.1| putative GTP-binding protein Era [Clostridium perfringens CPE str.
F4969]
gi|177908885|gb|EDT71377.1| putative GTP-binding protein Era [Clostridium perfringens D str.
JGS1721]
gi|182380862|gb|EDT78341.1| putative GTP-binding protein Era [Clostridium perfringens NCTC
8239]
gi|373225970|gb|EHP48297.1| GTPase Der [Clostridium perfringens WAL-14572]
gi|380304316|gb|EIA16605.1| GTP-binding protein Der [Clostridium perfringens F262]
Length = 438
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 261/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y E + F +IDTGG E
Sbjct: 3 KPIVAMVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAESEWLNRKFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q + AI +D+I+F+VDG++GL D+ + LRKS +P+VLV+NK
Sbjct: 63 PESSDIIVKQMRRQAQIAIEMADVIVFVVDGKEGLTAADQEVAQMLRKSKKPVVLVVNKI 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ + S +FY LGIG+P ISA G G+ + L+ ++ K+F +
Sbjct: 123 DRLALEENSYEFYNLGIGDPITISASQGLGLGDMLDEVV-------KYFNDPS-EDEEDD 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYI++A++GKPNVGKS+LIN LLGE RVI + PGTTRDSI S E + K+IL+DTAG+
Sbjct: 175 EYIRIAMIGKPNVGKSSLINRLLGEERVIVSNVPGTTRDSIDSYLETEDGKFILVDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SVI+T +I +A+V IL++DA+Q I+ QD I + +E ++++V V
Sbjct: 235 RRKSKVKEEIERYSVIRTYAAIEKADVAILVIDAEQGITEQDEKIIGYAHEMNKAIMVVV 294
Query: 301 NKWDSIIHNQRKIIKN---NIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
NKWD +I K + N ++++KL F+ +A + FISA+ ++ + + + YD+
Sbjct: 295 NKWD-LIEKDDKTLSNYQKDLQQKLKFMPYAKYLFISALTGQRVHKILSTAKYCYDNYSK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST + + A+ P L R K+ YA Q PP V N + Y RY
Sbjct: 354 RVSTGLLNDVISKAVLMKEPPVVALKRLKIYYATQVATKPPKFVFFVNDPNLLHFSYGRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|154505327|ref|ZP_02042065.1| hypothetical protein RUMGNA_02842 [Ruminococcus gnavus ATCC 29149]
gi|336432254|ref|ZP_08612090.1| GTP-binding protein engA [Lachnospiraceae bacterium 2_1_58FAA]
gi|153794370|gb|EDN76790.1| ribosome biogenesis GTPase Der [Ruminococcus gnavus ATCC 29149]
gi|336019194|gb|EGN48925.1| GTP-binding protein engA [Lachnospiraceae bacterium 2_1_58FAA]
Length = 450
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 260/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L R ++V + PG+TRDR Y + K F +IDTGG E
Sbjct: 11 KPVVAIVGRPNVGKSTLFNTLAGERISIVKDTPGVTRDRIYADVSWLDKEFTMIDTGGIE 70
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+I+FI D RQGLV+ D + + LR+S +P+VLV+NK
Sbjct: 71 PDSSDIILSQMREQAQIAIDTADVIVFITDVRQGLVDADSKVADMLRRSKKPVVLVVNKV 130
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + + +FY LGIG+P ISA GI + L+ +++ P +++
Sbjct: 131 DNFDKFMPDVYEFYNLGIGDPVPISAASRLGIGDMLDEVVS-HFPEGAGETEED------ 183
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E K+AIVGKPNVGKS+++N LLGENRVI D GTTRD+I + ++ +++YI IDTAG
Sbjct: 184 -ERPKIAIVGKPNVGKSSIVNKLLGENRVIVSDIAGTTRDAIDTAIKHEDREYIFIDTAG 242
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E+FS+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 243 LRRKNKIKEELERFSIIRTVTAVERADVVLMVIDATEGVTEQDAKIAGIAHERGKGVIIV 302
Query: 300 VNKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + K +N+I+ L ++ +A ++SA +N + I+ V DS +
Sbjct: 303 VNKWDAIEKNDKTMKQYENDIRTTLAYMPYAEIMYVSAKTGQRLNKLYDMIDMVIDSQTL 362
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + ++ A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 363 RIQTGVLNEIMMEAVAMQQPPSDKGKRLKLYYITQVSVKPPTFVIFVNDKELMHFSYTRY 422
Query: 418 LE 419
LE
Sbjct: 423 LE 424
>gi|322421095|ref|YP_004200318.1| ribosome-associated GTPase EngA [Geobacter sp. M18]
gi|320127482|gb|ADW15042.1| ribosome-associated GTPase EngA [Geobacter sp. M18]
Length = 440
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 253/422 (59%), Gaps = 13/422 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKSTLFNRL R A+V + PG+TRDR+Y E FI++DTGGF
Sbjct: 1 MKPIIAIVGRPNVGKSTLFNRLVGRRKAMVDDMPGVTRDRNYAEVTRFDLPFILVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE ++ +M +Q++ A+ E+D+I+F++D R GL D+ + + LR+ +P+ +INK
Sbjct: 61 EPETSDKLLQQMREQSRFAMDEADLILFVMDARDGLTPADRDVVDMLRRINKPVFYIINK 120
Query: 121 SENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ S DFY LG+ H ISA + G+ + ++ +L LPY + ++ E
Sbjct: 121 VDGEKQEANSGDFYSLGVDQIHTISAEHNRGVGDLMDEVLAA-LPYNREKEEDE------ 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++A+VG+PNVGKSTL+N LLG RV+ T GTTRD++ + F N K Y+LIDTAG
Sbjct: 174 -EITRIAVVGRPNVGKSTLVNRLLGYERVVANPTAGTTRDAVDTRFTVNKKPYLLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+ KT + +EK+SV+ L+SI A+VV+++L+A++ ++ QD IA + YE+GR I
Sbjct: 233 IRRKGKTVQKVEKYSVMDALRSIERADVVLIVLNAEEGVTEQDTKIAGYAYEAGRGCIFV 292
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ + I K I++ +L FA FISA + ++ V +
Sbjct: 293 VNKWDTVQKDNSTIGKFTEEIRRNFKYLPFAPILFISAETGQRTGKIIAEVDQVMEQYCK 352
Query: 358 HLSTSRITRALISAI-KNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++T + R A+ +NH P R K YA Q PP I NR + I Y+R
Sbjct: 353 RVTTGELNRIFNQAVDENHAPLDGGK-RVKFYYATQVAVKPPSFAIFTNRPEGIHFSYER 411
Query: 417 YL 418
Y+
Sbjct: 412 YI 413
>gi|294625013|ref|ZP_06703663.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294666614|ref|ZP_06731853.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292600688|gb|EFF44775.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292603634|gb|EFF47046.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 465
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 259/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + ++ FI++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEQQPFIVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++G+ +Q + A E+D+++F+VDGR+G D I +LRK +P VLVIN
Sbjct: 61 IAGD-EEGLAGATARQARAAAGEADLVLFVVDGREGASSLDDEILAWLRKLARPTVLVIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G + +SA + GI L+ + LP + E + +
Sbjct: 120 KIDGTDEETVRSEFARYGFSDVVALSAAHRQGIDELLDEV-GARLPEEG---AGELLD-N 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+++A VG+PNVGKSTL+N LLGE R+I + PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERMIASEVPGTTRDSIAVDLERDGRQYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR K E +EKFS KTL++I + V +L+LDA + ++ QD I I ++GR+L+V
Sbjct: 235 GLRRRGKVEEAVEKFSAFKTLQAIEQCQVAVLMLDATEGVTDQDATILGAILDAGRALVV 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD QR ++ + +KL F+++A ISA+ + + +I+ + S+
Sbjct: 295 AINKWDGQSDYQRAQAEDLLSRKLGFVNWAEAVRISALHGSGMRELFHAIHRAHASATHE 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + +AL A + +PP + KLRY H GG NPP ++HG RLK + YKRYL
Sbjct: 355 FSTSEVNQALEIAYETNPPPSIRGHVSKLRYVHPGGANPPTFIVHGTRLKVLPESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|254521460|ref|ZP_05133515.1| GTP-binding protein [Stenotrophomonas sp. SKA14]
gi|219719051|gb|EED37576.1| GTP-binding protein [Stenotrophomonas sp. SKA14]
Length = 465
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 263/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + + + F+++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEDNHFLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E ++G+ T+Q + A E+D+I+F+VD R+G D I +LRK +P +L+IN
Sbjct: 61 IAEE-EEGLAGATTRQARAAAAEADLILFVVDAREGTSAMDDEILAWLRKLSRPTLLLIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + S+ +F G G +SA + G+ + L+ ++ LP + +E N
Sbjct: 120 KIDGTDEDSVRSEFARYGFGEMLTVSAAHRQGLDDLLDEVIQ-RLPEEG--SGEELDN-- 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A VG+PNVGKSTL+N +LGE R+I D PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPNRIRIAFVGRPNVGKSTLVNRILGEERMIASDVPGTTRDSIAVDLERDGREYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR++ EV+EKFSV+KT++SI + V +L+LDA + ++ QD + + ++GR+L++
Sbjct: 235 GLRRRSRVDEVVEKFSVVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAVLDAGRALVI 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ + + KL F+ +A ISA + + +++ ++S+
Sbjct: 295 AINKWDGLTEYQREQAETLLSLKLGFVPWAESVRISAKHGSGLRELFRAVHRAHESANKT 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TS + +AL A + +PP + KLRY H G NPP ++HG RLK + YKRYL
Sbjct: 355 FTTSEVNKALEVAYETNPPPTIRGHVSKLRYVHPAGANPPTFIVHGTRLKELQESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|189425185|ref|YP_001952362.1| GTP-binding protein EngA [Geobacter lovleyi SZ]
gi|238692111|sp|B3E421.1|DER_GEOLS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189421444|gb|ACD95842.1| small GTP-binding protein [Geobacter lovleyi SZ]
Length = 449
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 256/422 (60%), Gaps = 14/422 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MK ++ +VGRPNVGKSTLFNR+ R A+V + PG+TRDR+Y K FI++DTGGF
Sbjct: 1 MKSIVAIVGRPNVGKSTLFNRIVGERRAIVDDMPGVTRDRNYAVVERYDKPFILVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + ++ +M +Q+ A+ E+D+I+F++D +QGL D + + LR+ +P+ V+NK
Sbjct: 61 EPVTEDRMLQQMREQSLLAMEEADVILFLMDAKQGLTPADNEVASMLRRVDKPVFYVVNK 120
Query: 121 --SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
E + + + +FY LGI N H ISA + GI++ L+ I+ + LP + + E TNI
Sbjct: 121 VDGEKVENEAA-EFYALGIDNMHTISAAHNRGIRDLLDEIMAL-LPDEPLPGEDEVTNI- 177
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
A+VG+PNVGKS+L+N LLG RV+ GTTRDS+ + F N K+Y LIDTA
Sbjct: 178 -------AVVGRPNVGKSSLVNRLLGFERVVANPVAGTTRDSVDTFFTCNKKRYCLIDTA 230
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR+ KT + +EK+SV+ LKSI A+V +++L+A+ I+ QD +IA ++YE+GR+ +
Sbjct: 231 GIRRKGKTSQKLEKYSVVDALKSIERADVALIVLNAEDGITEQDKHIAGYVYEAGRACVF 290
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD++ + + I K I+ + FL+FA F+SA I+ ME V +
Sbjct: 291 VVNKWDTLEKDNKTIGKFVEQIQYEFKFLAFAPIVFVSARTGQRIHKVMEEAAEVAEQYS 350
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++TS + R A++ H R K +A Q G PP I N+ + Y+R
Sbjct: 351 RRVTTSELNRVFKEAVEAHHAPLHHARRVKFYFATQVGVKPPTFAIFTNQPDGVLTPYQR 410
Query: 417 YL 418
YL
Sbjct: 411 YL 412
>gi|386718249|ref|YP_006184575.1| GTP-binding protein EngA [Stenotrophomonas maltophilia D457]
gi|384077811|emb|CCH12400.1| GTP-binding protein EngA [Stenotrophomonas maltophilia D457]
Length = 465
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 263/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + + + F+++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEDNHFLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E ++G+ T+Q + A E+D+I+F+VD R+G D I +LRK +P +L+IN
Sbjct: 61 IAEE-EEGLAGATTRQARAAAAEADLILFVVDAREGTSAMDDEILAWLRKLSRPTLLLIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G G +SA + G+ + L+ ++ LP + +E N
Sbjct: 120 KIDGTDEDTVRSEFARYGFGEMLTVSAAHRQGLDDLLDEVIQ-RLPEEG--SGEELDN-- 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A VG+PNVGKSTL+N +LGE R+I D PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPNRIRIAFVGRPNVGKSTLVNRILGEERMIASDVPGTTRDSIAVDLERDGREYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR++ EV+EKFSV+KT++SI + V +L+LDA + ++ QD + + ++GR+L++
Sbjct: 235 GLRRRSRVDEVVEKFSVVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAVLDAGRALVI 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ + + KL F+ +A ISA + + +++ ++S+
Sbjct: 295 AINKWDGLTEYQREQAETMLSLKLGFVPWAESVRISAKHGSGLRELFRAVHRAHESANKT 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TS + +AL A + +PP + KLRY H G NPP ++HG RLK + YKRYL
Sbjct: 355 FTTSEVNKALEVAYETNPPPTIRGHVSKLRYVHPAGSNPPTFIVHGTRLKELQESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|148244763|ref|YP_001219457.1| Era/TrmE family GTP-binding protein [Candidatus Vesicomyosocius
okutanii HA]
gi|146326590|dbj|BAF61733.1| GTP-binding protein, Era/TrmE family [Candidatus Vesicomyosocius
okutanii HA]
Length = 465
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 177/420 (42%), Positives = 263/420 (62%), Gaps = 12/420 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS---FIIIDTGG 59
P++ L+GRPNVGKSTLFNRL++SR ALV+++ GLTRDR Y + + + IIDTGG
Sbjct: 4 PIICLIGRPNVGKSTLFNRLSHSRQALVSDFAGLTRDRQYAKVLLNDDTQTFTTIIDTGG 63
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
F +V + + Q A+ ESD+I FI++ R G++ D I + LR+ + I+LV N
Sbjct: 64 FTNKVNL-VDSGIQDQILSALEESDVIYFILNSRDGVISLDLEIASHLRRLKKNIILVCN 122
Query: 120 KSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
K+E +N +++ +F+ELG+G P +ISA +G GI N + L + LP K N
Sbjct: 123 KAEGLNPTLTTEFFELGLGKPILISAEHGQGIDNLINTTLPL-LP-------KVTVNEEV 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+E I +A++GKPNVGKSTLIN +L E RVI D PGTTRDSI FE ++Y LIDTAG
Sbjct: 175 VEGITIAVLGKPNVGKSTLINHILREKRVIAIDLPGTTRDSIYIPFERKGQQYTLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+N T E IE FS+IKT+ ++ A+VVIL+LDAQ ++ QD ++ I + ++L++
Sbjct: 235 IRRKNSTHEKIEIFSIIKTINALERAHVVILVLDAQTGVTKQDASLLGMILDKDKALLIV 294
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + Q++ +K ++ KL+F+S+ ++ISA+ + ++ IN Y +
Sbjct: 295 INKWDGLDDYQKQEVKRKLEVKLSFISYTSVHYISALHGSGVDKLFTPINQSYQDACKQH 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
STS + + L A H P K R K++Y +Q P + HGN L+ + N Y+RYL+
Sbjct: 355 STSILNKILDKANHGHQPPLVKGRRLKIKYVNQTNIFPLTLAFHGNHLQNVPNAYERYLK 414
>gi|219682497|ref|YP_002468881.1| GTP-binding protein EngA [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|384226393|ref|YP_005617556.1| GTP-binding protein EngA [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|384227450|ref|YP_005619200.1| GTP-binding protein EngA [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|254783142|sp|B8D8C1.1|DER_BUCAT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219622230|gb|ACL30386.1| 50S ribosomal subunit stability factor (YfgK) [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|311086326|gb|ADP66408.1| GTP-binding protein EngA [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086900|gb|ADP66981.1| GTP-binding protein EngA [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 453
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 191/425 (44%), Positives = 265/425 (62%), Gaps = 10/425 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI-GKKSFIIIDTGG 59
M P++VL+GR NVGKSTLFN LT +RDALVANYPG+TRDR YG + K I+IDT G
Sbjct: 1 MIPIIVLIGRTNVGKSTLFNVLTKTRDALVANYPGITRDRQYGYCKLQSNKKIILIDTAG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++ + I + QT AI E+ +I+F+V+ R GL+ Q+ I+ +RK + +LVIN
Sbjct: 61 LDIKLNE-IEKQAQAQTLIAIKEAHLILFLVNARDGLMPQEYEISKNIRKYQKKTILVIN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + IN + + +FY LG ISA + GI + L + K FKKK N++
Sbjct: 120 KIDGINEASKINEFYSLGFEKIQKISASHNQGINTLINRYLIPWISEK--FKKKITENLY 177
Query: 179 SIE-----YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
IKVA +G+PNVGKSTLIN +L E R+IT +TPGTT DSI + +YN + Y
Sbjct: 178 KDTELKKIAIKVAFIGRPNVGKSTLINGILKEERMITSNTPGTTLDSISTPIKYNYENYT 237
Query: 234 LIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG 293
LIDTAG ++ K ++FS+IKTL++I ++NV++L++DA QD+++A+FI SG
Sbjct: 238 LIDTAGASKKKKKINDFQRFSIIKTLQTIEKSNVILLIIDASLQTCHQDLSLADFIIHSG 297
Query: 294 RSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
+ ++V VNK D + K IK IK KL FL F+ +FISA+ I +SI Y+
Sbjct: 298 KGIVVVVNKCDLFNSVELKKIKELIKSKLKFLYFSKIHFISALYKKGIFQLFKSIKESYE 357
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
S +STS + R + AIK H P K R KL+YAH G NPP I+IHGN++KY+
Sbjct: 358 DSKRKISTSTLIRTMHIAIKKHQPPIIKGRRIKLKYAHLGSSNPPKIIIHGNQVKYLSLP 417
Query: 414 YKRYL 418
YKRYL
Sbjct: 418 YKRYL 422
>gi|344207122|ref|YP_004792263.1| GTP-binding protein engA [Stenotrophomonas maltophilia JV3]
gi|343778484|gb|AEM51037.1| GTP-binding protein engA [Stenotrophomonas maltophilia JV3]
Length = 465
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 263/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + + + F+++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEDNHFLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E ++G+ T+Q + A E+D+I+F+VD R+G D I +LRK +P +L+IN
Sbjct: 61 IAEE-EEGLAGATTRQARAAAAEADLILFVVDAREGTSAMDDEILAWLRKLSRPTLLLIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G G +SA + G+ + L+ ++ LP + +E N
Sbjct: 120 KIDGTDEDTVRSEFARYGFGEMLTVSAAHRQGLDDLLDEVIQ-RLPEEG--SGEELDN-- 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A VG+PNVGKSTL+N +LGE R+I D PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPNRIRIAFVGRPNVGKSTLVNRILGEERMIASDVPGTTRDSIAVDLERDGREYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR++ EV+EKFSV+KT++SI + V +L+LDA + ++ QD + + ++GR+L++
Sbjct: 235 GLRRRSRVDEVVEKFSVVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAVLDAGRALVI 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ + + KL F+ +A ISA + + +++ ++S+
Sbjct: 295 AINKWDGLTEYQREQAETMLSLKLGFVPWAESVRISAKHGSGLRELFRAVHRAHESANKT 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TS + +AL A + +PP + KLRY H G NPP ++HG RLK + YKRYL
Sbjct: 355 FTTSEVNKALEVAYETNPPPTIRGHVSKLRYVHPAGANPPTFIVHGTRLKELQESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|408824041|ref|ZP_11208931.1| GTP-binding protein Der [Pseudomonas geniculata N1]
Length = 465
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 263/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + + + F+++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEDNHFLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E ++G+ T+Q + A E+D+I+F+VD R+G D I +LRK +P +L+IN
Sbjct: 61 IAEE-EEGLAGATTRQARAAAAEADLILFVVDAREGTSAMDDEILAWLRKLSRPTLLLIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + ++ +F G G +SA + G+ + L+ ++ LP + +E N
Sbjct: 120 KIDGTDEDTVRSEFARYGFGEMLTVSAAHRQGLDDLLDEVVQ-RLPEEG--SGEELDN-- 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A VG+PNVGKSTL+N +LGE R+I D PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPNRIRIAFVGRPNVGKSTLVNRILGEERMIASDVPGTTRDSIAVDLERDGREYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR++ EV+EKFSV+KT++SI + V +L+LDA + ++ QD + + ++GR+L++
Sbjct: 235 GLRRRSRVDEVVEKFSVVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAVLDAGRALVI 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ + + KL F+ +A ISA + + +++ ++S+
Sbjct: 295 AINKWDGLTEYQREQAETMLSLKLGFVPWAESVRISAKHGSGLRELFRAVHRAHESANKT 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TS + +AL A + +PP + KLRY H G NPP ++HG RLK + YKRYL
Sbjct: 355 FTTSEVNKALEVAYETNPPPTIRGHVSKLRYVHPAGSNPPTFIVHGTRLKELQESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|456737321|gb|EMF62028.1| GTP-binding protein EngA [Stenotrophomonas maltophilia EPM1]
Length = 465
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 262/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + + + F+++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEDNHFLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E +G+ T+Q + A E+D+I+F+VD R+G D I +LRK +P +L+IN
Sbjct: 61 IAGE-DEGLAGATTRQARAAAAEADLILFVVDAREGTSALDDEILAWLRKLSRPTLLLIN 119
Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + S+ +F G G +SA + G+ + L+ ++ LP + +E N
Sbjct: 120 KIDGTDEDSVRSEFARYGFGEMLTVSAAHRQGLDDLLDEVIQ-RLPEEG--SGEELDN-- 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A VG+PNVGKSTL+N +LGE R+I D PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPNRIRIAFVGRPNVGKSTLVNRILGEERMIASDVPGTTRDSIAVDLERDGREYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR++ EV+EKFSV+KT++SI + V +L+LDA + ++ QD + + ++GR+L++
Sbjct: 235 GLRRRSRVDEVVEKFSVVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAVLDAGRALVI 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ + + KL F+ +A ISA + + +++ ++S+
Sbjct: 295 AINKWDGLTEYQREQAETMLSLKLGFVPWAESVRISAKHGSGLRELFRAVHRAHESANKT 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TS + +AL A + +PP + KLRY H G NPP ++HG RLK + YKRYL
Sbjct: 355 FTTSEVNKALEVAYETNPPPTIRGHVSKLRYVHPAGSNPPTFIVHGTRLKELQESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|424668420|ref|ZP_18105445.1| GTPase Der [Stenotrophomonas maltophilia Ab55555]
gi|401068682|gb|EJP77206.1| GTPase Der [Stenotrophomonas maltophilia Ab55555]
Length = 465
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 262/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + + + F+++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEDNHFLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E +G+ T+Q + A E+D+I+F+VD R+G D I +LRK +P +L+IN
Sbjct: 61 IAGE-DEGLAGATTRQARAAAAEADLILFVVDAREGTSALDDEILAWLRKLSRPTLLLIN 119
Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + S+ +F G G +SA + G+ + L+ ++ LP + +E N
Sbjct: 120 KIDGTDEDSVRSEFARYGFGEMLTVSAAHRQGLDDLLDEVIQ-RLPEEG--SGEELDN-- 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A VG+PNVGKSTL+N +LGE R+I D PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPNRIRIAFVGRPNVGKSTLVNRILGEERMIASDVPGTTRDSIAVDLERDGREYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR++ EV+EKFSV+KT++SI + V +L+LDA + ++ QD + + ++GR+L++
Sbjct: 235 GLRRRSRVDEVVEKFSVVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAVLDAGRALVI 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ + + KL F+ +A ISA + + +++ ++S+
Sbjct: 295 AINKWDGLTEYQREQAETMLSLKLGFVPWAESVRISAKHGSGLRELFRAVHRAHESANKT 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TS + +AL A + +PP + KLRY H G NPP ++HG RLK + YKRYL
Sbjct: 355 FTTSEVNKALEVAYETNPPPTIRGHVSKLRYVHPAGSNPPTFIVHGTRLKELQESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|190574024|ref|YP_001971869.1| GTP-binding protein EngA [Stenotrophomonas maltophilia K279a]
gi|229463762|sp|B2FNR1.1|DER_STRMK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|190011946|emb|CAQ45567.1| putative GTP-binding protein [Stenotrophomonas maltophilia K279a]
Length = 465
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/421 (40%), Positives = 262/421 (62%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + + + F+++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEDNHFLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E +G+ T+Q + A E+D+I+F+VD R+G D I +LRK +P +L+IN
Sbjct: 61 IAGE-DEGLAGATTRQARAAAAEADLILFVVDAREGTSALDDEILAWLRKLSRPTLLLIN 119
Query: 120 KSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + S+ +F G G +SA + G+ + L+ ++ LP + +E N
Sbjct: 120 KIDGTDEDSVRSEFARYGFGEMLTVSAAHRQGLDDLLDEVIQ-RLPEEG--SGEELDN-- 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A VG+PNVGKSTL+N +LGE R+I D PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPNRIRIAFVGRPNVGKSTLVNRILGEERMIASDVPGTTRDSIAVDLERDGREYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR++ EV+EKFSV+KT++SI + V +L+LDA + ++ QD + + ++GR+L++
Sbjct: 235 GLRRRSRVDEVVEKFSVVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAVLDAGRALVI 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ + + KL F+ +A ISA + + +++ ++S+
Sbjct: 295 AINKWDGLTEYQREQAETMLSLKLGFVPWAESVRISAKHGSGLRELFRAVHRAHESANKT 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TS + +AL A + +PP + KLRY H G NPP ++HG RLK + YKRYL
Sbjct: 355 FTTSEVNKALEVAYETNPPPTIRGHVSKLRYVHPAGANPPTFIVHGTRLKELQESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|384228563|ref|YP_005620298.1| GTP-binding protein EngA [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539496|gb|AEO08363.1| GTP-binding protein EngA [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 450
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/420 (45%), Positives = 265/420 (63%), Gaps = 4/420 (0%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI-GKKSFIIIDTGG 59
M P++VL+GR NVGKSTLFN LT +++ALVANY G+TRDR YG + + I+IDT G
Sbjct: 1 MIPIIVLIGRTNVGKSTLFNVLTKTKNALVANYQGITRDRQYGYCQLESDQKVILIDTAG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ + + I + QT QAI ES++I+FIVD GL+ Q+ I+ +RK + +L+IN
Sbjct: 61 LDIKCNE-IEKKACIQTLQAIQESNLILFIVDAHDGLMPQENEISKIIRKYHKKTILIIN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + IN ++ +FY LG ISA++ GI N L+N K F K K N
Sbjct: 120 KIDGINKISNINEFYSLGFKKIQKISAIHNQGI-NTLKNKYLAPWIEKTFQKTKNNNNKI 178
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
IK+A +GKPNVGKSTLINS+L E R+IT PGTT DSI YNNK YILIDTA
Sbjct: 179 EKLPIKIAFIGKPNVGKSTLINSILNEERMITCHVPGTTLDSISIPIIYNNKNYILIDTA 238
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+ ++ + +IEKFS+IKTL++I ++N+V+L++DA I +D+++ANFI SG+ +++
Sbjct: 239 GVSKKKRNTNIIEKFSIIKTLQTIEKSNIVLLIIDASITICHRDLSLANFIINSGKGVVI 298
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NK D + +RK I+ IK K+ FL F +FISA+ I SI Y S
Sbjct: 299 IINKCDLLNAIERKKIEEIIKHKIKFLHFLRIHFISALYKKGIFQIFNSIYESYQESQKK 358
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST+ +T+ + A+K H P K + KL+YAH G NPP I+IHGNR+K I YK+YL
Sbjct: 359 ISTAILTKTMHIAVKKHQPPMIKGQKIKLKYAHLGSSNPPKIIIHGNRIKNISLSYKKYL 418
>gi|451818097|ref|YP_007454298.1| GTP-binding protein EngA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451784076|gb|AGF55044.1| GTP-binding protein EngA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 438
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/421 (42%), Positives = 257/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFNRL R ++V + PG+TRDR Y E +F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNRLAGKRISIVQDTPGVTRDRVYAEAEWLSYNFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q AI +D+I+FIVDG++GL D + LRKS +P+VLV+NK
Sbjct: 63 PERDDIIVKQMRRQANIAIETADVIVFIVDGKEGLTPADNEVATMLRKSKKPVVLVVNKV 122
Query: 122 ENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+++ + +FY LGIG+P ISA G G+ + L+ + +E K F+++E
Sbjct: 123 DSLKEEDNAWEFYNLGIGDPVTISASQGLGLGDMLDKV--VEGFDKSIFEEEE------D 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYI++A++GKPNVGKS+LIN LLGE+RVI D PGTTRD+I S E K+ILIDTAG+
Sbjct: 175 EYIRIAMIGKPNVGKSSLINKLLGEDRVIVSDVPGTTRDAIDSHLETEEGKFILIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SV++T +I A+V IL++DA + I+ QD I + +E ++++V V
Sbjct: 235 RRKSKVKEEIERYSVVRTYAAIERADVCILMIDATEGITEQDEKIIGYAHEMRKAIMVIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K ++ L FLS+A + FISA+ N + + YD+
Sbjct: 295 NKWDLVEKDDKTLDKFKKELQGNLKFLSYAEYLFISALTGQRTNKVLHMAKYCYDNYNKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + AI P + R K+ YA Q PP V N Y+RYL
Sbjct: 355 VSTGILNDVISKAILMKEPPVVGIKRMKIYYATQVATRPPKFVFFVNDESARHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|118602671|ref|YP_903886.1| small GTP-binding protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567610|gb|ABL02415.1| small GTP-binding protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 465
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 260/420 (61%), Gaps = 11/420 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS---FIIIDTGG 59
P++ LVGRPNVGKSTLFNRL++SR ALV+++ GLTRDR Y E + + IIDTGG
Sbjct: 4 PIICLVGRPNVGKSTLFNRLSHSRQALVSDFEGLTRDRQYAEVLLDNDTQTFATIIDTGG 63
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ + + Q A+ ESDII FIV R G++ D I + LRK + I+LV N
Sbjct: 64 LTNK-NNLVDSSIQGQVLNALEESDIIYFIVSSRDGVIGLDLEIVSRLRKLKKNIILVCN 122
Query: 120 KSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
K+E +N +++ +F+ELG+G P +ISA +G GI + ++ L + LP K I
Sbjct: 123 KAEGLNPALAAEFFELGLGEPMLISAEHGQGIADLIDTTLPL-LP------KVTIDEIVE 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+E I VA++G+PNVGKSTLIN +LG+ RV+ D PGTT DSI FE+ +KY IDTAG
Sbjct: 176 VEGITVAVLGRPNVGKSTLINRILGQERVLVMDFPGTTHDSIYIPFEHEGQKYTFIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+ T E +E FS+IK + ++ A+VVIL+LDAQ + QD + I + G++L++
Sbjct: 236 IRRKRSTHEKVEIFSIIKAIDALERAHVVILVLDAQVGVIEQDATLLGMIIDKGKALLIV 295
Query: 300 VNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
+NKWD + Q++ +K ++ KL+F+++A ++ISA+ + IN Y ++
Sbjct: 296 INKWDGLDDYQKQEVKRKLEIKLSFINYASVHYISALHAFGVGKLFTPINQSYQNAGEQH 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
STS + + L A ++H P K R K++Y +Q PP HGN L+ + N Y+RYL+
Sbjct: 356 STSVLNKILEKANQDHQPPPVKGRRLKIKYVNQTDVFPPTFTFHGNHLQNVPNAYERYLK 415
>gi|384226872|ref|YP_005618623.1| GTP-binding protein EngA [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|311087969|gb|ADP68048.1| GTP-binding protein EngA [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 441
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/425 (44%), Positives = 265/425 (62%), Gaps = 10/425 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI-GKKSFIIIDTGG 59
M P++VL+GR NVGKSTLFN LT +RDALVANYPG+TRDR YG + K I+IDT G
Sbjct: 1 MIPIIVLIGRTNVGKSTLFNVLTKTRDALVANYPGITRDRQYGYCKLQSNKKIILIDTAG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++ + I + QT AI E+ +I+F+V+ R GL+ Q+ I+ +RK + +LVIN
Sbjct: 61 LDIKLNE-IEKQAQAQTLIAIKEAHLILFLVNARDGLMPQEYEISKNIRKYQKKTILVIN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + IN + + +FY LG ISA + GI + L + K FKKK N++
Sbjct: 120 KIDGINEASKINEFYSLGFEKIQKISASHNQGINTLINRYLIPWISEK--FKKKITENLY 177
Query: 179 SIE-----YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
IKVA +G+PNVGKSTLIN +L E R+IT +TPGTT DSI + +YN + Y
Sbjct: 178 KDTELKKIAIKVAFIGRPNVGKSTLINGILKEERMITSNTPGTTLDSISTPIKYNYENYT 237
Query: 234 LIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG 293
LIDTAG ++ K ++FS+IKTL++I ++NV++L++DA QD+++A+FI SG
Sbjct: 238 LIDTAGASKKKKKINDFQRFSIIKTLQTIEKSNVILLIIDASLQTCHQDLSLADFIIHSG 297
Query: 294 RSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
+ ++V VNK D + K IK IK KL FL F+ +FISA+ I +SI Y+
Sbjct: 298 KGIVVVVNKCDLFNSVELKKIKELIKSKLKFLYFSKIHFISALYKKGIFQLFKSIKESYE 357
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
S +STS + + + AIK H P K R KL+YAH G NPP I+IHGN++KY+
Sbjct: 358 DSKRKISTSTLIKTMHIAIKKHQPPIIKGRRIKLKYAHLGSSNPPKIIIHGNQVKYLSLP 417
Query: 414 YKRYL 418
YKRYL
Sbjct: 418 YKRYL 422
>gi|150016018|ref|YP_001308272.1| GTP-binding protein EngA [Clostridium beijerinckii NCIMB 8052]
gi|189037141|sp|A6LSI6.1|DER_CLOB8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|149902483|gb|ABR33316.1| small GTP-binding protein [Clostridium beijerinckii NCIMB 8052]
Length = 438
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/421 (42%), Positives = 258/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y E + +F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLRYNFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q AI +D+IIFIVDG++GL D + LRKS +P+VLV+NK
Sbjct: 63 PENNDIIIKQMRRQANIAIETADVIIFIVDGKEGLTAADNEVATMLRKSKKPVVLVVNKV 122
Query: 122 ENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + + + +FY LGIG+P ISA G G+ + L+ ++ K F K +
Sbjct: 123 DNLKDENNAYEFYNLGIGDPMAISAGQGLGLGDMLDEVV-------KHFDKSIYDE-EDD 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYI++A++GKPNVGKS+LIN LLGE RVI D PGTTRDSI S E K+IL+DTAG+
Sbjct: 175 EYIRIAMIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDSIDSHLETEEGKFILVDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SVI+T +I A+V IL++DA + I+ QD I + +E ++++V V
Sbjct: 235 RRKSKVKEEIERYSVIRTYAAIERADVCILMIDATEGITEQDEKIIGYAHELRKAIMVIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K +++ L FLS+A + FISA+ N ++ + YD+
Sbjct: 295 NKWDLVEKDDKTLDKFKKDLQSNLKFLSYAEYLFISALTGQRTNKVLKLARYCYDNYNKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + A+ P + R K+ YA Q PP V N Y+RYL
Sbjct: 355 ISTGILNDVISKAVLMKEPPIVGIKRMKIYYATQVATKPPKFVFFINDESARHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|15617192|ref|NP_240405.1| GTP-binding protein EngA [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681942|ref|YP_002468328.1| GTP-binding protein EngA [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471654|ref|ZP_05635653.1| GTP-binding protein EngA [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11132317|sp|P57662.1|DER_BUCAI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783141|sp|B8D8G4.1|DER_BUCA5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|25328230|pir||C85000 hypothetical GTP-binding protein [imported] - Buchnera sp. (strain
APS)
gi|10039257|dbj|BAB13291.1| hypothetical GTP-binding protein [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219624785|gb|ACL30940.1| 50S ribosomal subunit stability factor (YfgK) [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
Length = 453
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/425 (44%), Positives = 265/425 (62%), Gaps = 10/425 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI-GKKSFIIIDTGG 59
M P++VL+GR NVGKSTLFN LT +RDALVANYPG+TRDR YG + K I+IDT G
Sbjct: 1 MIPIIVLIGRTNVGKSTLFNVLTKTRDALVANYPGITRDRQYGYCKLQSNKKIILIDTAG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++ + I + QT AI E+ +I+F+V+ R GL+ Q+ I+ +RK + +LVIN
Sbjct: 61 LDIKLNE-IEKQAQAQTLIAIKEAHLILFLVNARDGLMPQEYEISKNIRKYQKKTILVIN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + IN + + +FY LG ISA + GI + L + K FKKK N++
Sbjct: 120 KIDGINEASKINEFYSLGFEKIQKISASHNQGINTLINRYLIPWISEK--FKKKITENLY 177
Query: 179 SIE-----YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
IKVA +G+PNVGKSTLIN +L E R+IT +TPGTT DSI + +YN + Y
Sbjct: 178 KDTELKKIAIKVAFIGRPNVGKSTLINGILKEERMITSNTPGTTLDSISTPIKYNYENYT 237
Query: 234 LIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG 293
LIDTAG ++ K ++FS+IKTL++I ++NV++L++DA QD+++A+FI SG
Sbjct: 238 LIDTAGASKKKKKINDFQRFSIIKTLQTIEKSNVILLIIDASLQTCHQDLSLADFIIHSG 297
Query: 294 RSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
+ ++V VNK D + K IK IK KL FL F+ +FISA+ I +SI Y+
Sbjct: 298 KGIVVVVNKCDLFNSVELKKIKELIKSKLKFLYFSKIHFISALYKKGIFQLFKSIKESYE 357
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
S +STS + + + AIK H P K R KL+YAH G NPP I+IHGN++KY+
Sbjct: 358 DSKRKISTSTLIKTMHIAIKKHQPPIIKGRRIKLKYAHLGSSNPPKIIIHGNQVKYLSLP 417
Query: 414 YKRYL 418
YKRYL
Sbjct: 418 YKRYL 422
>gi|300854433|ref|YP_003779417.1| GTP-binding protein [Clostridium ljungdahlii DSM 13528]
gi|300434548|gb|ADK14315.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528]
Length = 438
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/421 (42%), Positives = 256/421 (60%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y E K +F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRISIVEDTPGVTRDRVYAEAEWLKYNFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q + A+ +D IIFIVDG++G+ D+ + LRKS +P+VLV+NK
Sbjct: 63 PESTDVIISQMRRQAQVAVETADTIIFIVDGKEGVTAADREVAQMLRKSKKPVVLVVNKI 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+NIN + + +FY LGIG P ISA G+ + L+ ++ + FK E +I S
Sbjct: 123 DNINQNAYVYEFYNLGIGEPMAISASQALGLGDMLDKVV-------ENFKDDEDDDIDS- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYIKVA +GKPNVGKS+LIN LLGE RVI D PGTTRD++ S E + K +LIDTAG+
Sbjct: 175 EYIKVAFIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDAVDSYLETDYGKLLLIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+++K E IE++SVI+T +I A+V +L+LDA NIS QD I + +E +S++V +
Sbjct: 235 RKKSKVKEEIERYSVIRTYTAIERADVCVLILDAVHNISEQDEKIIGYAHELSKSIMVII 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I + + + K I L+F+ +A + FISA +N ++ I YD+
Sbjct: 295 NKWDLIDKDTKTVDKYKTEIGTSLSFMPYAPYLFISAKTGQRVNKVLQLIKECYDNYCKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ P R K+ Y Q G PP V N + Y+RY+
Sbjct: 355 IKTGVLNDIISKAVMMKEPPVILGKRLKIYYVTQIGNKPPTFVFFVNDPSCVHFSYRRYI 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|414562954|ref|YP_005618145.1| GTP-binding protein EngA [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087490|gb|ADP67570.1| GTP-binding protein EngA [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 453
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/425 (44%), Positives = 264/425 (62%), Gaps = 10/425 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYI-GKKSFIIIDTGG 59
M P++VL+GR NVGKSTLFN LT +RDALVANYPG+TRDR YG + K I+IDT G
Sbjct: 1 MIPIIVLIGRTNVGKSTLFNVLTKTRDALVANYPGITRDRQYGYCKLQSNKKIILIDTAG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++ + I + QT AI E+ +I+F+V+ R GL+ Q+ I+ +RK + +LVIN
Sbjct: 61 LDIKLNE-IEKQAQAQTLIAIKEAHLILFLVNARDGLMPQEYEISKNIRKYQKKTILVIN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + IN + + +FY LG ISA + GI + L + K FKKK N++
Sbjct: 120 KIDGINEASKINEFYSLGFEKIQKISASHNQGINTLINRYLIPWISEK--FKKKITENLY 177
Query: 179 SIE-----YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI 233
IKVA +G+PNVGKSTLIN +L E R+IT +TPGTT DSI + +YN + Y
Sbjct: 178 KDTELKKIAIKVAFIGRPNVGKSTLINGILKEERMITSNTPGTTLDSISTPIKYNYENYT 237
Query: 234 LIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESG 293
LIDTAG ++ K ++FS+IKTL++I ++NV++L++DA QD+++A+FI SG
Sbjct: 238 LIDTAGASKKKKKINDFQRFSIIKTLQTIEKSNVILLIIDASLQTCHQDLSLADFIIHSG 297
Query: 294 RSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
+ ++V VNK D + K IK IK KL FL F+ +FISA+ I SI Y+
Sbjct: 298 KGIVVVVNKCDLFNSVELKKIKELIKSKLKFLYFSKIHFISALYKKGIFQLFTSIKESYE 357
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
S +STS + + + AIK H P K R KL+YAH G NPP I+IHGN++KY+
Sbjct: 358 DSKRKISTSTLIKTMHIAIKKHQPPIIKGRRIKLKYAHLGSSNPPKIIIHGNQVKYLSLP 417
Query: 414 YKRYL 418
YKRYL
Sbjct: 418 YKRYL 422
>gi|430750090|ref|YP_007212998.1| ribosome-associated GTPase EngA [Thermobacillus composti KWC4]
gi|430734055|gb|AGA58000.1| ribosome-associated GTPase EngA [Thermobacillus composti KWC4]
Length = 440
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 265/421 (62%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ R A+V + PG+TRDR YG K+F I+DTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGVTRDRIYGTSEWNGKTFSIVDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ IM + Q + AI E+D I+F+VDG+ GL D+ + L +SG+P+V+ +NK
Sbjct: 63 IDAGDEIMRSVRAQAELAIDEADTIVFMVDGKAGLTHADEEVARLLFRSGKPVVVAVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N S+ +FY LG G+P IS +G GI + L+ ++ LP ++E+ +
Sbjct: 123 DNPGRIDSIYEFYSLGFGDPIAISGSHGTGISDLLDRVVE-ALPEPS---EEEYDD---- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + +K++LIDTAG+
Sbjct: 175 DVIRVALIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFEKDGRKFVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV+++LK+I ++VV++L++A++ I QD +IA + +E+G++ ++ V
Sbjct: 235 RKRGKIYETTEKYSVLRSLKAIERSDVVLVLINAEEGIIEQDKHIAGYAHEAGKASVLVV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + + + I+ + F+S+A F+SA ++ + + HV + +
Sbjct: 295 NKWDAVEKDDKTMRQFELRIRDQFQFMSYAPIVFLSAKTKQRLHRLLPVVEHVAEQHAMR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ +PP K R ++ YA Q PP IV+ N + + Y RYL
Sbjct: 355 VQTHLLNDIVADAVAVNPPPTDKGKRLRINYATQVAVKPPTIVLFVNDPELMHFSYSRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|153953981|ref|YP_001394746.1| GTP-binding protein EngA [Clostridium kluyveri DSM 555]
gi|219854595|ref|YP_002471717.1| hypothetical protein CKR_1252 [Clostridium kluyveri NBRC 12016]
gi|189037142|sp|A5N7W7.1|DER_CLOK5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783148|sp|B9E1C8.1|DER_CLOK1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|146346862|gb|EDK33398.1| Hypothetical protein CKL_1356 [Clostridium kluyveri DSM 555]
gi|219568319|dbj|BAH06303.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 438
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 182/423 (43%), Positives = 257/423 (60%), Gaps = 15/423 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y + +F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRISIVEDTPGVTRDRVYAQAEWLNYNFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q + AI +++IIFIVDGR+GL DK + LRKS +PIVLV+NK
Sbjct: 63 PENNDVIISKMRRQAQVAIETANVIIFIVDGREGLTAADKEVAQMLRKSKKPIVLVVNKI 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + +FY LGIG P ISA G G+ + L+ ++ + F K E
Sbjct: 123 DNMKQENYIYEFYNLGIGEPISISASQGLGLGDMLDKLV------ENF--KNEGNEDEDS 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYIK+A +GKPNVGKS+LIN LLGE RVI D PGTTRD+I S E + K++LIDTAG+
Sbjct: 175 EYIKIAFIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDAIDSYLETDEGKFLLIDTAGV 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IEK+SVI+T ++ A+V IL+LDA +IS QD I + +E ++++V +
Sbjct: 235 RRKSKVKEEIEKYSVIRTYTAVERADVCILMLDATHDISEQDEKIIGYAHELNKAIMVVI 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K +I L+F+S+A + FISA +N + + YD+
Sbjct: 295 NKWDLVDKDTKTVNKYKTSIGSSLSFMSYAPYLFISAKTGQRVNRIFKMVRECYDNYCKQ 354
Query: 359 LSTSRITRAL--ISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ T + + I +K P K R K+ Y Q G PP V N K I Y+R
Sbjct: 355 IKTGILNDIIGKIVMMKEPPVVGNK--RLKIYYVTQIGTKPPTFVFFVNDSKCIHFSYRR 412
Query: 417 YLE 419
Y+E
Sbjct: 413 YIE 415
>gi|194365440|ref|YP_002028050.1| GTP-binding protein EngA [Stenotrophomonas maltophilia R551-3]
gi|238693498|sp|B4SSW8.1|DER_STRM5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|194348244|gb|ACF51367.1| small GTP-binding protein [Stenotrophomonas maltophilia R551-3]
Length = 465
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 261/421 (61%), Gaps = 8/421 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKS-FIIIDTGG 59
M P++ LVGRPNVGKST+FN LT +RDALV + PG+TRDR+YG + + + F+++DTGG
Sbjct: 1 MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEDNHFLVVDTGG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E ++G+ T+Q + A E+D+I+F+VD R G D I +LRK +P +L+IN
Sbjct: 61 IAEE-EEGLAGATTRQARAAAAEADLILFVVDARDGSSAMDDEILAWLRKLSRPTLLLIN 119
Query: 120 KSENINS-SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K + + S+ +F G +SA + G+ + LE ++ LP + +E N
Sbjct: 120 KIDGTDEDSVRSEFARYGFSEMLTVSAAHRQGLDDLLEEVVQ-RLPEEG--SGEELDN-- 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
I++A VG+PNVGKSTL+N +LGE R+I D PGTTRDSI E + ++Y LIDTA
Sbjct: 175 DPNRIRIAFVGRPNVGKSTLVNRILGEERMIASDVPGTTRDSIAVDLERDGREYRLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RRR++ EV+EKFSV+KT++SI + V +L+LDA + ++ QD + + ++GR+L++
Sbjct: 235 GLRRRSRVDEVVEKFSVVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAVLDAGRALVI 294
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + QR+ + + +L F+ +A ISA + + +++ ++S+
Sbjct: 295 AINKWDGLTEYQREQAETMLSLRLGFVPWAESVRISAKHGSGLRELFRAVHRAHESANKT 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TS + +AL A + +PP + KLRY H G NPP ++HG RLK + YKRYL
Sbjct: 355 FTTSEVNKALEVAYETNPPPTIRGHVSKLRYVHPAGANPPTFIVHGTRLKELQESYKRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|332799113|ref|YP_004460612.1| GTP-binding protein engA [Tepidanaerobacter acetatoxydans Re1]
gi|438002226|ref|YP_007271969.1| GTP-binding protein EngA [Tepidanaerobacter acetatoxydans Re1]
gi|332696848|gb|AEE91305.1| GTP-binding protein engA [Tepidanaerobacter acetatoxydans Re1]
gi|432179020|emb|CCP25993.1| GTP-binding protein EngA [Tepidanaerobacter acetatoxydans Re1]
Length = 439
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/423 (41%), Positives = 258/423 (60%), Gaps = 13/423 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VG+PNVGKSTLFNR+ R ++V + PG+TRDR YGE K F ++DTGG
Sbjct: 1 MSFIVAVVGKPNVGKSTLFNRIIGKRISIVDDKPGVTRDRIYGEAEWNGKKFTMVDTGGV 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP K I+ +M +Q AI +++I+F+VDG++GL D + LR+SG+P++LV+NK
Sbjct: 61 EPASKDIILSQMKRQADFAIETANLILFMVDGKEGLTPTDLDVAQILRRSGKPVLLVVNK 120
Query: 121 SEN-INSSISLDFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIH 178
+N N++ +FY+LG G+P ISA++G + + L+ I IE P+ + E
Sbjct: 121 VDNYTNTAYDYEFYKLGFGDPIFISAVHGLAVGDLLDKITDYIEEPH--ILSEDE----- 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ IKVAI+GKPNVGKS+L+N++LGE RVI D PGTTRD+I S FE N KK + IDTA
Sbjct: 174 --DIIKVAIIGKPNVGKSSLLNAILGEERVIVSDIPGTTRDAIDSYFEINGKKMLFIDTA 231
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+R++++ E +E +S ++ L +I A+VV+++LDA QNIS QD IA +E+G+++I+
Sbjct: 232 GLRKKSRISEDVEYYSTVRALGAIDRADVVLMVLDASQNISEQDKRIAGIAHEAGKAVII 291
Query: 299 CVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD I + IK +L F+ +A ++SA + +E IN V D+
Sbjct: 292 IVNKWDLIDKDSHTTDEFSKKIKNELAFMQYAPIVYVSAKTGQRVGRILELINFVMDNYT 351
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ TS + + A P K + K+ YA Q G PP + N +K Y R
Sbjct: 352 FRVKTSLLNELVREATAVSEPPSIKGKKLKIFYATQTGIKPPTFIFFVNDIKLFHFSYAR 411
Query: 417 YLE 419
YLE
Sbjct: 412 YLE 414
>gi|146328838|ref|YP_001209431.1| GTP-binding family protein [Dichelobacter nodosus VCS1703A]
gi|146232308|gb|ABQ13286.1| GTP-binding family protein [Dichelobacter nodosus VCS1703A]
Length = 449
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 174/416 (41%), Positives = 257/416 (61%), Gaps = 6/416 (1%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
+ LVGRPNVGKSTLFN LT SR A+V+N GLTRDR Y + ++IDTGG
Sbjct: 8 VALVGRPNVGKSTLFNTLTRSRQAIVSNKAGLTRDRIYARTTLAGVPCMLIDTGGMLNTE 67
Query: 65 KKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENI 124
I + +Q + A+ E+D+I+F++D R GL D+ I LR+ +PIVL +NK + +
Sbjct: 68 TAEIDFRVDEQARTAMEEADVIVFVLDARDGLTLDDEQIAAELRRVTKPIVLAVNKIDGV 127
Query: 125 NSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYI 183
+ +++ DFY LG+ I+A GIK LE+++ LP E + E I
Sbjct: 128 DPDVAVADFYRLGMQPVLTIAAEQRRGIKQ-LEDLIVSLLPPAPIENANETA---AQESI 183
Query: 184 KVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN-KKYILIDTAGIRR 242
+A++G+PN GKSTL+N LLGE R++ GTTRD+I+ + N + LIDTAGIRR
Sbjct: 184 HLAVLGRPNAGKSTLLNRLLGEERLVASPVAGTTRDAIRIPYVDNEGDAFTLIDTAGIRR 243
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
+ + + IEKFS++K L++I +ANVVIL+LDAQ I+ QD ++ I + GR L++ VNK
Sbjct: 244 KARVDDKIEKFSIVKALEAIEQANVVILVLDAQAGITDQDAHLLGEIIKRGRGLVIAVNK 303
Query: 303 WDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTS 362
WD + R+ I+ +++KLNF+ +A +ISA+ +NI + + ++ VY S ++ +ST+
Sbjct: 304 WDHLDGETREKIQAQLERKLNFVDYAEIFYISALHGSNIRALLPAVKTVYRSVMMEISTN 363
Query: 363 RITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T+AL A H P KL+YAHQGGKNPP ++IHG R + Y +YL
Sbjct: 364 QWTQALELAYHRHQPPLVNGRAIKLQYAHQGGKNPPHVIIHGARTDNVPASYTQYL 419
>gi|197117132|ref|YP_002137559.1| GTP-binding protein EngA [Geobacter bemidjiensis Bem]
gi|238690874|sp|B5EE25.1|DER_GEOBB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|197086492|gb|ACH37763.1| GTPase EngA [Geobacter bemidjiensis Bem]
Length = 440
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 253/422 (59%), Gaps = 13/422 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKSTLFNRL R A+V + PG+TRDR+Y E FI++DTGGF
Sbjct: 1 MKPIIAIVGRPNVGKSTLFNRLVGRRKAMVDDMPGVTRDRNYAEVNRFDVPFILVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE ++ +M +Q++ A+ E+D+I+FI+D R GL D+ + + LR+ +P+ +INK
Sbjct: 61 EPETSDRLLQQMREQSRFAMDEADLILFIMDARGGLTPADRDVVDMLRRINKPVFYIINK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ DFY LG+ + H ISA + G+ + ++ +L +PY + +KE
Sbjct: 121 VDGEKQEAEAGDFYSLGVDHIHTISAEHNRGVGDLMDEVLAA-IPYDR---EKELDE--- 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++A+VG+PNVGKSTL+N LLG RV+ T GTTRD++ + F N K Y+LIDTAG
Sbjct: 174 -EITRIAVVGRPNVGKSTLVNRLLGYERVVANPTAGTTRDAVDTRFTVNKKPYLLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+ KT + +EK+SV+ L+SI A+VV+++L+A++ ++ QD IA + YE+GR I
Sbjct: 233 IRRKGKTVQKVEKYSVMDALRSIERADVVLIVLNAEEGVTEQDSKIAGYAYEAGRGCIFV 292
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ + I K I++ +L FA F+SA + ++ V +
Sbjct: 293 VNKWDTLAKDNSSIAKFTEEIRRNFKYLPFAPILFVSAETGQRTGKIIAEVDQVMEQYCK 352
Query: 358 HLSTSRITRALISAI-KNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++T + R A+ +NH P R K +A Q PP V+ N + I Y+R
Sbjct: 353 RVTTGELNRVFTQAVDENHAPLSAGR-RVKFYFATQVAVKPPSFVVFTNCPEGIHFSYER 411
Query: 417 YL 418
Y+
Sbjct: 412 YI 413
>gi|410727128|ref|ZP_11365351.1| ribosome-associated GTPase EngA [Clostridium sp. Maddingley
MBC34-26]
gi|410599463|gb|EKQ54016.1| ribosome-associated GTPase EngA [Clostridium sp. Maddingley
MBC34-26]
Length = 438
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 255/421 (60%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y E +F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLSYNFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q AI +D+I+FIVDG++GL D + LRKS +P+VLV+NK
Sbjct: 63 PERDDIIVKQMRRQANIAIETADVIVFIVDGKEGLTAADNEVATMLRKSKKPVVLVVNKV 122
Query: 122 ENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+++ + + +FY LGIG+P ISA G G+ + L+ I+ + F K +
Sbjct: 123 DSLKDEDNAWEFYNLGIGDPITISASQGLGLGDMLDKIV------ENF--DKSIYDEEDD 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYI++A++GKPNVGKS+LIN LLGE RVI D PGTTRD+I S E K+ILIDTAG+
Sbjct: 175 EYIRIAMIGKPNVGKSSLINKLLGEERVIVSDIPGTTRDAIDSYLETEEGKFILIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SV++T +I A+V IL++DA + I+ QD I + +E ++++V V
Sbjct: 235 RRKSKVKEEIERYSVVRTYAAIERADVCILMIDATEGITEQDEKIIGYAHEMRKAIMVIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K ++ L FLS+A + FISA+ N ++ + YD+
Sbjct: 295 NKWDLVEKDDKTLDKFKKELQGNLKFLSYAEYLFISALTGQRTNKVLQVAKYCYDNYNKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + A+ P L R K+ YA Q PP V N Y+RYL
Sbjct: 355 VSTGILNDVISKAVLMKEPPVVGLKRMKIYYATQVATKPPKFVFFVNDESARHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|40062766|gb|AAR37660.1| GTP-binding protein, Era/TrmE family [uncultured marine bacterium
439]
Length = 463
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/421 (41%), Positives = 259/421 (61%), Gaps = 15/421 (3%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFI-IIDTGGFE 61
PV+ LVGRPNVGKSTLFNRL+NSR ALV+++ GLTRDR Y + ++ IIDTGG
Sbjct: 4 PVISLVGRPNVGKSTLFNRLSNSRQALVSDFEGLTRDRQYATVQLDDETMCSIIDTGGLT 63
Query: 62 PE---VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
E + GI HE Q A+ ESD+I FIV + G+ D I++ LRK + I+LV
Sbjct: 64 NEDSLIDTGI-HE---QVLSALDESDVIFFIVSNKDGVTSLDLDISSQLRKLKKNIILVC 119
Query: 119 NKSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
NK+E +N + +F+ELG+G P +ISA + GI +E +TI L + F N
Sbjct: 120 NKAEGLNQVTAAEFFELGLGEPVLISAEHNQGISELIE--ITIPLLPQNFE-----NNET 172
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
++ I VA++G+PNVGKSTLIN +LGE RV+ D PGTTRD+I F ++Y LIDTA
Sbjct: 173 EVKGIAVAVLGRPNVGKSTLINRILGEERVLAIDIPGTTRDTIFIPFTREGEQYTLIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR+ E +EKFS+IK ++++ +++VVIL+LDA + ++ QD + I + GR+L++
Sbjct: 233 GIRRKRSVEEKVEKFSIIKAIEALEDSHVVILVLDAHEGVTEQDATLLGMIADKGRALLI 292
Query: 299 CVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
+NKWD + Q+ +K + KL+F+S+A ++ISA+ + + I ++ +
Sbjct: 293 VINKWDGLDDYQKSEVKRKLDVKLSFISYASVHYISALHGSGVGKLFTHIRKSFEHAGAK 352
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
STS + + L A H RPKL+Y HQ PP + +HGN L+ I Y+++L
Sbjct: 353 FSTSSLNKILEKANNKHQAPAVGGRRPKLKYVHQSDVFPPTLTMHGNHLQRIPKSYEQFL 412
Query: 419 E 419
+
Sbjct: 413 K 413
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYI-LIDTA 238
+ Y +++VG+PNVGKSTL N L + + D G TRD + + +++ +IDT
Sbjct: 1 MSYPVISLVGRPNVGKSTLFNRLSNSRQALVSDFEGLTRDRQYATVQLDDETMCSIIDTG 60
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+ + +I+ + L ++ E++V+ ++ + +++ D++I++ + + +++I+
Sbjct: 61 GLTNED---SLIDTGIHEQVLSALDESDVIFFIVSNKDGVTSLDLDISSQLRKLKKNIIL 117
Query: 299 CVNKWDSI 306
NK + +
Sbjct: 118 VCNKAEGL 125
>gi|39997323|ref|NP_953274.1| GTP-binding protein Der [Geobacter sulfurreducens PCA]
gi|409912667|ref|YP_006891132.1| GTPase EngA [Geobacter sulfurreducens KN400]
gi|81832003|sp|Q74AX4.1|DER_GEOSL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|39984214|gb|AAR35601.1| GTPase EngA [Geobacter sulfurreducens PCA]
gi|298506260|gb|ADI84983.1| GTPase EngA [Geobacter sulfurreducens KN400]
Length = 438
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/419 (39%), Positives = 257/419 (61%), Gaps = 11/419 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P++ +VGRPNVGKSTLFNRL R A+V + PG+TRDR+Y FI+IDTGGFEP
Sbjct: 4 PIVAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGFEP 63
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
E ++ +M +Q++ A+ E+D+I+F++DGR GL D + LR+ +P+ V+NK +
Sbjct: 64 ESSDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRVDKPVFFVVNKVD 123
Query: 123 NINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
++ +FY LG+ N ISA + G+++ ++ ++ LP + T+
Sbjct: 124 GETLEVAASEFYSLGVDNLLTISAEHNRGVRDLMDEVVAA-LPQRT-------TSPEERN 175
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
K+A+VG+PNVGKS+L+N LLG RV+ TPGTTRDS+ + F N K+Y+LIDTAGIR
Sbjct: 176 ATKIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNKKRYLLIDTAGIR 235
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
R+ KT + IEK+SV+ +L+SI A+VV+++L+A++ ++ QD IA + +E+G++ I VN
Sbjct: 236 RKGKTTQKIEKYSVVDSLRSIERADVVLIVLNAEEGVTEQDERIAGYAFEAGKACIFVVN 295
Query: 302 KWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD+I + + + + I+ + +L+F F+SA +N ME + V + +
Sbjct: 296 KWDAIEKDNSSVGRFVDKIRTEFKYLAFVPIVFVSAKTGQRLNRIMEEVEKVMAQYVKRV 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+TS + R +A+++H R K +A Q G PP VI NR + Y+RYL
Sbjct: 356 TTSELNRIFSAAVESHHHPLVMGRRVKFYFATQVGTRPPTFVIFTNRPDGMHFSYERYL 414
>gi|153816157|ref|ZP_01968825.1| hypothetical protein RUMTOR_02405 [Ruminococcus torques ATCC 27756]
gi|317500477|ref|ZP_07958701.1| GTP-binding protein engA [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089422|ref|ZP_08338321.1| GTP-binding protein engA [Lachnospiraceae bacterium 3_1_46FAA]
gi|336438827|ref|ZP_08618448.1| GTP-binding protein engA [Lachnospiraceae bacterium 1_1_57FAA]
gi|145846492|gb|EDK23410.1| ribosome biogenesis GTPase Der [Ruminococcus torques ATCC 27756]
gi|316898232|gb|EFV20279.1| GTP-binding protein engA [Lachnospiraceae bacterium 8_1_57FAA]
gi|330404790|gb|EGG84328.1| GTP-binding protein engA [Lachnospiraceae bacterium 3_1_46FAA]
gi|336017317|gb|EGN47079.1| GTP-binding protein engA [Lachnospiraceae bacterium 1_1_57FAA]
Length = 441
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 260/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + K F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYADVTWLDKEFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ K I+ +M +Q + AI +D+IIFI D +QGLV+ D + + LR+SG+P+VLV+NK
Sbjct: 63 PDSKDIILSQMREQAQIAIDTADVIIFITDVKQGLVDADSKVADMLRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + ++ +FY LGIG+P ISA G+ + L +I+ P +
Sbjct: 123 DNFDKYMADVYEFYNLGIGDPVPISAASRLGLGDML-DIVAENFP-------EGSAQAED 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +VAIVGKPNVGKS++IN LLGENRVI D GTTRD+I + +N K+YI IDTAG
Sbjct: 175 DDRPRVAIVGKPNVGKSSIINKLLGENRVIVSDIAGTTRDAIDTEILHNGKEYIFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVLMVIDATEGVTEQDAKIAGIAHERGKGVIIV 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N R + +++I++ L+++ +A ++SA +N + I+ V ++ +
Sbjct: 295 VNKWDAIEKNDRTMREYESDIRQVLSYMPYAEIMYVSAATGQRLNRLYDMIDMVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RIATGVLNEIMTEAVAMQQPPSDKGKRLKLYYITQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|187931320|ref|YP_001891304.1| GTP-binding protein EngA [Francisella tularensis subsp.
mediasiatica FSC147]
gi|238691534|sp|B2SF94.1|DER_FRATM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|187712229|gb|ACD30526.1| GTP-binding protein [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 465
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 170/424 (40%), Positives = 268/424 (63%), Gaps = 8/424 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGR NVGKSTLFN LTNS DALV ++ G+TRDR YG+ ++++DTGG
Sbjct: 1 MSFLVAIVGRANVGKSTLFNVLTNSHDALVFDFEGVTRDRQYGQAKYDDLDYLVVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ G M KQ++ AI E++++ F+VDGR GL D+ + + LR+ + +V+V+NK
Sbjct: 61 SDK-DVGFDEFMAKQSQIAIDEANLVFFVVDGRSGLTTGDEYVASLLRQKDKKVVVVVNK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + ++ +FY G ISA + + ++ L + P ++++ T H
Sbjct: 120 VDGTDEEAAMAEFYSFGFDKVFAISAAHRRNTQKLVDKFL--KKPLNEYYQDYTQTQEHK 177
Query: 180 IEY---IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ I +++G+PNVGKSTL N +LGE+RV+ +D PGTT DS+ FE + +KY ++D
Sbjct: 178 EQQRHGIHFSLIGRPNVGKSTLTNRMLGEDRVVVFDMPGTTIDSVSIPFERHGQKYTIVD 237
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K + +EKFSVIKTL++I ++NVV+ ++DA+Q IS QD+++ +F ++GR+L
Sbjct: 238 TAGVRKRGKVKQTLEKFSVIKTLQAIQDSNVVVAVVDARQGISDQDLSLIHFAIKNGRAL 297
Query: 297 IVCVNKWDSIIHNQRKIIKNNIKKKLNFL-SFAMFNFISAIKLNNINSFMESINHVYDSS 355
++ VNKWD + R +K ++K+KL FL + +FISA+ N+ ESI+ Y +
Sbjct: 298 VLAVNKWDGMTEEDRIQVKQDLKRKLFFLQDYVDIHFISALHGTNVGHVFESIDTAYACA 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ T + A++ H R KL+YAH GG NPP+IVIHGN++ + N YK
Sbjct: 358 NKKITTADATCLMQLAVEAHSLPMVGKFRIKLKYAHVGGHNPPVIVIHGNQVSRLPNSYK 417
Query: 416 RYLE 419
RYLE
Sbjct: 418 RYLE 421
>gi|253699395|ref|YP_003020584.1| GTP-binding protein EngA [Geobacter sp. M21]
gi|259645878|sp|C6E0Y6.1|DER_GEOSM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|251774245|gb|ACT16826.1| small GTP-binding protein [Geobacter sp. M21]
Length = 440
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 252/422 (59%), Gaps = 13/422 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKSTLFNRL R A+V + PG+TRDR+Y E FI++DTGGF
Sbjct: 1 MKPIIAIVGRPNVGKSTLFNRLVGRRKAMVDDMPGVTRDRNYAEVNRFDVPFILVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE ++ +M +Q++ A+ E+D+I+F++D R GL D+ + + LR+ +P+ +INK
Sbjct: 61 EPETSDRLLQQMREQSRFAMDEADLILFVMDARGGLTPADRDVVDMLRRINKPVFYIINK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ DFY LG+ + H ISA + G+ + ++ +L +PY + + E
Sbjct: 121 VDGEKQEAEAGDFYSLGVDHIHTISAEHNRGVGDLMDEVLAA-IPYDREKESDE------ 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++A+VG+PNVGKSTL+N LLG RV+ T GTTRD++ + F N K Y+LIDTAG
Sbjct: 174 -EITRIAVVGRPNVGKSTLVNRLLGYERVVANPTAGTTRDAVDTRFTVNKKPYLLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+ KT + +EK+SV+ L+SI A+VV+++L+A++ ++ QD IA + YE+GR I
Sbjct: 233 IRRKGKTVQKVEKYSVMDALRSIERADVVLIVLNAEEGVTEQDSKIAGYAYEAGRGCIFV 292
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ + I K I++ +L FA F+SA + ++ V +
Sbjct: 293 VNKWDTLAKDNSSIAKFTEEIRRNFKYLPFAPILFVSAETGQRTGKIIAEVDQVMEQYCK 352
Query: 358 HLSTSRITRALISAI-KNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++T + R A+ +NH P R K +A Q PP V+ N + I Y+R
Sbjct: 353 RVTTGELNRVFTQAVDENHAPLSAGR-RVKFYFATQVAVKPPSFVVFTNCPEGIHFSYER 411
Query: 417 YL 418
Y+
Sbjct: 412 YI 413
>gi|403386906|ref|ZP_10928963.1| GTP-binding protein Der [Clostridium sp. JC122]
Length = 439
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 180/421 (42%), Positives = 256/421 (60%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y E +F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNHNFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P + IM +M +Q AI +D+I+FIVDG+ GL D + LRKS +PIVLV+NK
Sbjct: 63 PTNEDIIMSQMRRQANIAIETADVIVFIVDGKAGLHPSDHEVAQMLRKSKKPIVLVVNKV 122
Query: 122 ENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ I + +FY LGIGNP ISA G G+ + L+ ++ K F + N
Sbjct: 123 DRIEQEDNAYEFYNLGIGNPVTISASQGLGLGDMLDEVV-------KHFNYDD-ANEEEE 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E IK+A++GKPNVGKS+LIN ++GE+R I + PGTTRD+I S E N K+ LIDTAG+
Sbjct: 175 EDIKIAMIGKPNVGKSSLINKIIGEDRNIVSNIPGTTRDAIDSKVETNEGKFTLIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SV++TL +I A+V IL++DA + +S QD I + +E ++++V V
Sbjct: 235 RRKSKVKEEIERYSVVRTLTAIERADVCILMIDATEGLSDQDEKIVGYAHELNKAIMVIV 294
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I + + K +NNI K L+F+++A + FISA +N ++ YDS
Sbjct: 295 NKWDLIEKDDKTMKEFQNNIAKGLSFMNYAPYLFISAKTGQRVNKVLQMAKECYDSYSKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
++T + + A+ P L R K+ YA Q G PP + N + Y+RYL
Sbjct: 355 VATGVLNDVISRAVLMKEPPIVALRRLKIFYATQVGTKPPTFIFFVNDPNLLHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|166030917|ref|ZP_02233746.1| hypothetical protein DORFOR_00598 [Dorea formicigenerans ATCC
27755]
gi|346306527|ref|ZP_08848683.1| GTP-binding protein engA [Dorea formicigenerans 4_6_53AFAA]
gi|166029184|gb|EDR47941.1| ribosome biogenesis GTPase Der [Dorea formicigenerans ATCC 27755]
gi|345897901|gb|EGX67798.1| GTP-binding protein engA [Dorea formicigenerans 4_6_53AFAA]
Length = 442
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 262/422 (62%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L + ++V + PG+TRDR Y + K F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYADVSWLDKDFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE K I+ +M +Q + AI SD+IIFI D +QGLV+ D + + LR+SG+P++LV+NK
Sbjct: 63 PESKDIILSQMREQAQIAIDTSDVIIFITDVKQGLVDSDSKVADMLRRSGKPVILVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + ++ +FY LGIG+P ISA G+ + L+ ++ P ++++
Sbjct: 123 DNFDKYMADTYEFYNLGIGDPVPISASSRLGLGDMLDKVIE-HFPEHAGEEEED------ 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+VAIVGKPNVGKS++IN LLGE RVI D GTTRD+I + +N K+Y+ IDTAG
Sbjct: 176 -SRPRVAIVGKPNVGKSSIINKLLGEQRVIVSDIAGTTRDAIDTEIVHNGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA Q ++ QD +A +E G+ +I+
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVLVVIDATQGVTEQDAKVAGIAHERGKGVIIV 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + + +N +++ L+F+ +A ++SA+ + + I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTMREYENEVRRVLSFMPYAEIMYVSAVTGQRLPKMFDMIDMVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + L+ A P K R K+ Y Q PP VI N + + Y+RY
Sbjct: 355 RVATGVLNEILMEATAMQQPPSDKGKRLKIYYMTQVAVKPPSFVIFVNDKELMHFSYQRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|444966216|ref|ZP_21283758.1| ribosome-associated GTPase EngA, partial [Escherichia coli 99.1775]
gi|444571587|gb|ELV48063.1| ribosome-associated GTPase EngA, partial [Escherichia coli 99.1775]
Length = 350
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/353 (45%), Positives = 230/353 (65%), Gaps = 30/353 (8%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ LVGRPNVGKSTLFNRLT +RDALVA++PGLTRDR YG I + FI IDTGG
Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P LV NK
Sbjct: 61 DG-TEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANK 119
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E +
Sbjct: 120 TDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-ED 175
Query: 180 IEY------------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPG 215
EY IK+AIVG+PNVGKSTL N +LGE RV+ YD PG
Sbjct: 176 AEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPG 235
Query: 216 TTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQ 275
TTRDSI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA+
Sbjct: 236 TTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR 295
Query: 276 QNISAQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFA 328
+ IS QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA
Sbjct: 296 EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFA 348
>gi|404493026|ref|YP_006717132.1| GTP-binding protein Der [Pelobacter carbinolicus DSM 2380]
gi|123574290|sp|Q3A4Q5.1|DER_PELCD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|77545090|gb|ABA88652.1| GTPase EngA [Pelobacter carbinolicus DSM 2380]
Length = 439
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/418 (37%), Positives = 256/418 (61%), Gaps = 10/418 (2%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
V+ +VGRPNVGKSTLFNR+ +R A+V +YPG+TRDR+Y + F++IDTGGFEP
Sbjct: 3 VVAIVGRPNVGKSTLFNRILGTRRAIVEDYPGVTRDRNYAQVTRYGTPFVLIDTGGFEPA 62
Query: 64 VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE- 122
+ ++ +M +Q++ A+ E+D+I+F+VD ++GL D + LR+SG+P++ V+NK +
Sbjct: 63 SQNRLLKQMREQSELAVEEADVILFVVDAKEGLTPSDDEVAGMLRRSGKPVLYVVNKVDG 122
Query: 123 NINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY 182
+ + + + +FY LG+ + +SA +G G+ + + +L K + S E
Sbjct: 123 DSHEAAASEFYALGVDQLYTVSAEHGRGMDDLMAAVLAALPAPAKL-------DARSCEE 175
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
++A++G+PNVGKS+LIN ++G R++ T GTTRDSI + F YN K Y+LIDTAGIRR
Sbjct: 176 TRLAVIGRPNVGKSSLINRMIGVERLVANPTAGTTRDSIDTPFVYNKKSYVLIDTAGIRR 235
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
+ + + +EK+SVI++LK++ A+VV++++DA++ ++ QD+ +A + E GR++++ VNK
Sbjct: 236 KGRVQQKLEKYSVIQSLKAMERAHVVLVVIDAEEGVTEQDLTVAGYALERGRAVLLVVNK 295
Query: 303 WDSII--HNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
WD + H K ++ FL FA F+SA+ ++ M + V +
Sbjct: 296 WDLVTKDHGTMKQYTEKVRHAFKFLPFAPIIFVSALSGQRVSKIMAEVEKVAIEFNRQVP 355
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
T + R L A+ +H P + R K Y Q G PP V+ GNR + Y+RYL
Sbjct: 356 TGVLNRVLEEAVLSHAPPMVQGKRLKFYYMTQTGVRPPSFVVFGNRATGVHFSYERYL 413
>gi|325265091|ref|ZP_08131818.1| ribosome-associated GTPase EngA [Clostridium sp. D5]
gi|324029781|gb|EGB91069.1| ribosome-associated GTPase EngA [Clostridium sp. D5]
Length = 442
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 263/422 (62%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYADVSWLDREFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ + I+ +M +Q + AI +D+IIFI D +QGLV+ D + + LR+SG+P++LV+NK
Sbjct: 63 PDSRDVILSQMREQAQIAIDTADVIIFITDVKQGLVDSDSKVADMLRRSGKPVILVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + + +FY LGIG+P ISA G+ + L+ + T P ++++
Sbjct: 123 DNFDKFMPDVYEFYNLGIGDPVPISAASRLGLGDMLDEV-TAHFPKSAGEEEED------ 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AIVGKPNVGKS++IN LLGENRVI D GTTRD+I + ++ K+YI IDTAG
Sbjct: 176 -DRPRIAIVGKPNVGKSSIINKLLGENRVIVSDVAGTTRDAIDTEILHDGKEYIFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+++ E +E++S+I+T+ ++ A+VV++++DA++ ++ QD IA +E G+ +I+
Sbjct: 235 LRRKSRIKEELERYSIIRTVTAVERADVVLIVIDAEEGVTEQDAKIAGIAHERGKGIIIV 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ N + + N I++ L++LS+A ++SA+ +N E I+ V ++ +
Sbjct: 295 VNKWDAVEKNDKTMREYDNKIRQVLSYLSYAEIMYVSAVTGQRLNKLYEMIDIVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RVATGVLNEIMTEAVAMQQPPSDKGKRLKLYYITQVSVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|108759687|ref|YP_631948.1| GTP-binding protein EngA [Myxococcus xanthus DK 1622]
gi|122981004|sp|Q1D5X5.1|DER_MYXXD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|108463567|gb|ABF88752.1| GTP-binding protein EngA [Myxococcus xanthus DK 1622]
Length = 459
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 251/425 (59%), Gaps = 12/425 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKSTLFNRL R ALV + PG+TRDRHY + + F IDTGGF
Sbjct: 1 MKPLVAIVGRPNVGKSTLFNRLVGRRIALVQDEPGVTRDRHYADAEWEGRQFTFIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
P + ++ ++ +Q + A+ E D+I+F+ D R GL D+ + N+LRKSG+P+VL NK
Sbjct: 61 VPGDEDQLLQQVREQAQLAVDECDVIVFVTDARAGLTAADEAVANYLRKSGKPVVLAANK 120
Query: 121 SENIN---SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
+N + +++ +FY LG+G+ +SA +G G++ ++++ LP K+ + E
Sbjct: 121 LDNTSGQMQALAGEFYRLGLGDVQALSAEHGLGMQELFDSVVA-RLPPKEEGEDAEAPPD 179
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
I I++AI+G+PNVGKSTL+N++L E RV+ D GTTRD + S Y ++K +L DT
Sbjct: 180 DGI--IRLAIIGRPNVGKSTLVNAILKEKRVVASDVAGTTRDPVDSELTYKDRKLLLTDT 237
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AGIRR+ + +E+FSV+ LK + ++V +LL+DA + QD +A E GR+L+
Sbjct: 238 AGIRRKKSIAQRVEQFSVVAALKVMERSDVAVLLMDATEPAVDQDAKLAGLAEERGRALV 297
Query: 298 VCVNKWDSIIHNQRK--IIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD + +QR+ + ++K L F+ +A F SA+ + + ++ + D
Sbjct: 298 IVVNKWDLVGADQRRQETYRESLKHSLKFVGYAPILFTSALTGSKVEKVVDVATELADQF 357
Query: 356 IIHLSTSRITRALISAIKNHPP--CRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
T ++ R L + NHP R K +R + Y Q PP I N + +
Sbjct: 358 RFRAPTPQLNRLLDHMVDNHPAPIVRGKPLR--MYYIAQVAAAPPTFTITVNHPDGVPDM 415
Query: 414 YKRYL 418
YKRY+
Sbjct: 416 YKRYI 420
>gi|397905173|ref|ZP_10506044.1| GTP-binding protein EngA [Caloramator australicus RC3]
gi|397161822|emb|CCJ33378.1| GTP-binding protein EngA [Caloramator australicus RC3]
Length = 439
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/421 (40%), Positives = 255/421 (60%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y E F ++DTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLVGKRISIVEDTPGVTRDRIYAEVEWLNYRFTLVDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + I+ +M +Q + AI +D+I+F+VDG++GL D + LR+ +P+VLV+NK
Sbjct: 63 PESEDIILKQMKRQAQIAIETADVILFMVDGKEGLTATDIEVAEMLRRVKKPVVLVVNKI 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ +FY LG+G P ISA GI + L+ I+ K+FK KE +
Sbjct: 123 DNLKLEDNKFEFYSLGLGEPITISAALSLGIGDMLDEIV-------KYFKDKEADDEEE- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
IKVAIVGKPNVGKS+L+N L GE R I D PGTTRD+I SL E N +K++ IDTAGI
Sbjct: 175 PLIKVAIVGKPNVGKSSLLNRLTGEERAIVSDIPGTTRDAIDSLVEINGEKFLFIDTAGI 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IEK+SVI++L +I A+V ++++DA + ++ QD IA +E+G+ +++ V
Sbjct: 235 RRKSKIKEEIEKYSVIRSLAAIDRADVCLIMIDATEGVTEQDEKIAGIAHEAGKGIVIVV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I + + + N I+ L+F+++A +ISA + ++ I +V D + +
Sbjct: 295 NKWDLIEKDDKTMNEYNNKIRTALSFMTYAPIIYISAKTGQRVTKLIDLIKYVADQNAMR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ P +K K+ YA Q PP I N + + Y RYL
Sbjct: 355 VKTGILNEVISEAVMLRQPPVEKGKALKIYYATQVLTKPPTFAIFVNDEEIVHFSYDRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|304406963|ref|ZP_07388617.1| ribosome-associated GTPase EngA [Paenibacillus curdlanolyticus YK9]
gi|304343950|gb|EFM09790.1| ribosome-associated GTPase EngA [Paenibacillus curdlanolyticus YK9]
Length = 440
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 261/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ R A+V + PG+TRDR YG G ++F I+DTGG E
Sbjct: 3 RPVIAIVGRPNVGKSTIFNRVIGDRLAIVEDKPGVTRDRIYGTGEWNGRAFSIVDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + IM + Q + A+ E+D+IIF+VD + G+ D + L +S +PIV+ +NK
Sbjct: 63 IDGEDEIMKSVRMQAELAVEEADVIIFMVDAKAGMTHADDEVAQMLFRSRKPIVVAVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N N + +FY LG G P IS +G GI + L+ + +LP ++ +
Sbjct: 123 DNFNRMDDVYEFYGLGFGTPVAISGSHGTGIGDLLDAAVE-KLP-------EQVDEEYDE 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + ++Y+LIDTAG+
Sbjct: 175 DVIRVALIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFEKDGQRYVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV+++LK+I A+VV++L++ ++ I QD +IA + +E+G++ I V
Sbjct: 235 RKRGKVYETTEKYSVMRSLKAIERADVVLILINGEEGIIEQDKHIAGYAHEAGKASIFVV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ +++ + +++ F+ +A F+SA ++ + +NHV + +
Sbjct: 295 NKWDAVERDEKTMSHFTQDVRDHFLFMHYAPIAFLSAKTKQRLHKLLPIVNHVSEQHALR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ +PP K R ++ YA Q PP IVI N + + Y+RYL
Sbjct: 355 IQTHVLNDVISDAVAINPPPTDKGKRLRINYATQVATKPPTIVIFVNDPEIMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|154498134|ref|ZP_02036512.1| hypothetical protein BACCAP_02115 [Bacteroides capillosus ATCC
29799]
gi|150273124|gb|EDN00281.1| ribosome biogenesis GTPase Der [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 441
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 256/424 (60%), Gaps = 14/424 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKS LFNRL R ++V + PG+TRDR Y E + F I+DTGG
Sbjct: 1 MKPLVAIVGRPNVGKSMLFNRLVGQRLSIVEDTPGVTRDRIYAECEWRNRKFDIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP I+ M +Q + AI +D+ +F+ D + GL D+ + N L +SG+P+VL +NK
Sbjct: 61 EPNTDSEILSFMREQAEIAIRNADVTVFVCDIKSGLTASDQEVANMLLRSGKPVVLAVNK 120
Query: 121 SENI---NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
+ + N I +FY LG+G+P +SA++G+G + L+ P + ++ +
Sbjct: 121 MDQVGMTNPDI-FEFYNLGLGDPIAVSAVHGHGTGDLLDACFQYFPPEDQVEEQDDV--- 176
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
IKVA++GKPNVGKS+LIN +LGE RVI + GTTRD+I S +E + KYILIDT
Sbjct: 177 -----IKVAVIGKPNVGKSSLINRILGEERVIVSNMAGTTRDAIDSYYENDKGKYILIDT 231
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+++K + IEKFSV++ +I +V ++++DAQ+ ++ QD +A +E+G++ I
Sbjct: 232 AGMRKKSKVDDRIEKFSVLRATMAIERCDVCLIMVDAQEGVTEQDTKVAGLAHEAGKACI 291
Query: 298 VCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD+I + + + ++ ++++ L+++++A FISA + E IN+V D +
Sbjct: 292 IVVNKWDAIEKDDKTMDKMRQDVRRDLSYMTYAPILFISAKTGQRVERLFELINYVNDQA 351
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ ++T + L A P K R K+ Y Q G PP V+ N + Y+
Sbjct: 352 SLRITTGMLNTVLADATARVQPPTDKGRRLKIYYMTQVGIKPPHFVVFCNDAQLFHFSYQ 411
Query: 416 RYLE 419
RY+E
Sbjct: 412 RYIE 415
>gi|253578391|ref|ZP_04855663.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850709|gb|EES78667.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 441
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 255/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L + ++V + PG+TRDR Y + K+F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYADVTWLDKTFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+IIFI D QGLV+ D + + LR+SG+P+VLV+NK
Sbjct: 63 PDSSDIILSQMREQAQIAIDTADVIIFITDVHQGLVDSDAKVADMLRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++I + +FY LGIG P ISA G+ + L+ + K F + +
Sbjct: 123 DSIQKFMMDVYEFYNLGIGEPIPISAANRMGLGDMLDEVA------KHFPEDADTEEDDE 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I ++AIVGKPNVGKS+L+N LLGE+RVI D GTTRD++ + ++ K YI IDTAG
Sbjct: 177 IP--RIAIVGKPNVGKSSLVNKLLGEDRVIVSDIAGTTRDAVDTRVKWQGKDYIFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E IE++SVI+T+ ++ A+VVI+++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKGKVKEEIERYSVIRTVTAVERADVVIVMIDASEGVTEQDAKIAGIAHERGKGVIIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I K N I++ L ++ +A FISA I+ E+I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTIYKHTNRIREVLAYMPYAELVFISAKTGLRISRMFETIDAVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + L A+ P K R K+ Y Q PP VI N + + Y RY
Sbjct: 355 RIQTGVLNEILSEAVAMQQPPSDKGKRLKIYYMTQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|339443166|ref|YP_004709171.1| hypothetical protein CXIVA_21020 [Clostridium sp. SY8519]
gi|338902567|dbj|BAK48069.1| hypothetical protein CXIVA_21020 [Clostridium sp. SY8519]
Length = 442
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 256/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L R ++V + PG+TRDR Y + F +IDTGG E
Sbjct: 3 KPVVAVVGRPNVGKSTLFNALAGERISIVEDTPGVTRDRIYADVEWLNHPFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ K I+ +M +Q + AI +D+IIF+ D QGL++ D + + LR+S +P++LV+NK
Sbjct: 63 PDSKDIILSQMREQAEIAIASADVIIFMTDVHQGLIDADAKVADLLRRSHKPVILVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LGIG+PH ISA G+ + LE ++ P K+
Sbjct: 123 DSFQKMMPDVYEFYNLGIGDPHPISAASRLGLGDMLEAVVA-HFP-------KQEQEEEE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ KVAI+GKPNVGKS+LIN L G++RVI D GTTRD+I + YN ++Y+ IDTAG
Sbjct: 175 DDRPKVAIIGKPNVGKSSLINRLSGDSRVIVSDIAGTTRDAIDTDISYNGREYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E IE+FS+I+ + ++ A+VV++L+DA + ++ QD IA +E G+ +IV
Sbjct: 235 LRRKNKIKEEIERFSIIRAVTAVERADVVVILIDAVEGVTEQDAKIAGIAHERGKGIIVA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + + + + I++ L+F+ +A FISA ++ + I+ V +++ +
Sbjct: 295 VNKWDAIEKTDKSVYQYTDRIRQTLSFMPYAEIMFISAKTGQRVSKLFDMIDMVLENNSM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + L+ A+ P K R K+ Y Q PP V+ N K + Y RY
Sbjct: 355 RIATGVLNEILMEAVAMQQPPSDKGRRLKIYYMTQVAVKPPTFVVFVNSKKLMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|297568834|ref|YP_003690178.1| ribosome-associated GTPase EngA [Desulfurivibrio alkaliphilus AHT2]
gi|296924749|gb|ADH85559.1| ribosome-associated GTPase EngA [Desulfurivibrio alkaliphilus AHT2]
Length = 487
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 258/420 (61%), Gaps = 9/420 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P++ LVGRPNVGKS+LFNRL SR A+V PG+TRDRHY + + FI++DTGG E
Sbjct: 50 PLVALVGRPNVGKSSLFNRLAGSRKAIVDPTPGVTRDRHYEKITWNDRRFILVDTGGLES 109
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ I + +QT QA+ E+D+++F++DGR+G++ D+ + LR+SG+ + +INK +
Sbjct: 110 DTTTEINRLIQEQTSQAVAEADVVLFLLDGREGILPDDQEVVEILRRSGKKVFYLINKID 169
Query: 123 NINSSISL--DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ L FYELG+ +SA +G GI + L+ + ELP + + + +
Sbjct: 170 APEQAAKLLPTFYELGVEELWPVSAEHGQGIGDLLDRV-AAELPPAQ----EPGEEVSAE 224
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ + VA +G+PNVGKS+LIN LLGE R++ + PGTTRDS+ +L +KKY+LIDTAGI
Sbjct: 225 DTVGVAFIGRPNVGKSSLINRLLGEERMVVSNLPGTTRDSVDTLLTRADKKYLLIDTAGI 284
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ K E +EKFSV++ L+++ ++ ++++DA + ++ QD + + E GR+ +V +
Sbjct: 285 RRKGKVHEKVEKFSVLRALRTLERCDLALIVIDALEGVTEQDTKVLGYGLERGRACLVLL 344
Query: 301 NKWDSIIHN--QRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I H+ Q++ + ++K+ ++F +A + +SA+ + + I+ V +
Sbjct: 345 NKWDLIEHDRKQQQRLLEDVKRAVHFAGYAPVHRVSALTGHGLGKLFPLIDKVAEQYRRK 404
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+T+ + R L A++ HPP K R KL Y Q +PP ++I N K I Y R+L
Sbjct: 405 FTTAVLNRILEEAVQAHPPALHKGRRVKLNYVTQIASSPPTLIIFTNDPKGIHFSYSRFL 464
>gi|258515338|ref|YP_003191560.1| GTP-binding protein EngA [Desulfotomaculum acetoxidans DSM 771]
gi|257779043|gb|ACV62937.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771]
Length = 443
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 268/423 (63%), Gaps = 13/423 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFNR+ +R A+V PG+TRDR Y E +SF+++DTGG +
Sbjct: 3 KPIVAIVGRPNVGKSTLFNRIVGARVAIVEGQPGITRDRLYQEAEWSGRSFMLVDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I+ + Q + AI E+D+++F+VD R GL+ D+ + N LR++ P++LV NK
Sbjct: 63 FQENDEIVSNVRHQARLAIEEADLVLFVVDARSGLLGSDEEVANILRRTDTPVLLVANKV 122
Query: 122 ENI---NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
EN ++ L+FY LG+G P +SA G + L+ ++T+ LP E + +
Sbjct: 123 ENFSLEDNPQFLEFYSLGLGEPIPVSAAEGKNTGDLLDQVITL-LPL-------EIKDDY 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ IK+A++G+PNVGKS+L+NS+LG+ RVI + PGTTRD+I + FE ++K Y+LIDTA
Sbjct: 175 DPDVIKIAVIGRPNVGKSSLVNSILGQERVIVSNVPGTTRDAIDTPFERDDKHYVLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR+++ + EK+SV+++LK+I ++V +++LDA++ ++ QD IA + +E G++ I+
Sbjct: 235 GIRRKSRIYISTEKYSVLRSLKAIDRSDVALIVLDAEEGVTDQDKRIAGYAHEKGKASII 294
Query: 299 CVNKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+NKWD I + I I++++ F+++A FISA+ ++ +E +++V +
Sbjct: 295 IINKWDLIEKDDHTMSIFTRKIREEMGFITYAPVLFISALTRQRVHRVLELVDYVSEQHS 354
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ ++T+ + + A+ ++ P K R K+ YA Q PP ++ N + + Y R
Sbjct: 355 LRIATANLNTLIREALLHNAPPAPKGKRLKIYYATQKSVKPPTYILFVNDPELMHFSYLR 414
Query: 417 YLE 419
YLE
Sbjct: 415 YLE 417
>gi|384228014|ref|YP_005619759.1| GTP-binding protein EngA [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538954|gb|AEO08931.1| GTP-binding protein EngA [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 450
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 190/423 (44%), Positives = 269/423 (63%), Gaps = 9/423 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIG-KKSFIIIDTGG 59
M P++VL+GR NVGKSTLFN LT +RDALV NYPG+TRDR YG + + ++IDT G
Sbjct: 1 MIPIIVLIGRTNVGKSTLFNILTKTRDALVINYPGITRDRQYGYCKLQLNQKVMLIDTAG 60
Query: 60 FEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ ++ + I + +QT AI ES +I+F+VD GL+ Q+ I +R + +L+IN
Sbjct: 61 LDMKLNE-IQKKAHEQTLIAIKESHLILFVVDAHDGLMAQEYEIAQNIRTHHKKTILIIN 119
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEF--TN 176
K + +N + + +FY LG ISA + GI ++ L +P+ KKE N
Sbjct: 120 KIDGVNHASKINEFYSLGFEKIQKISASHNQGIDTLIKKHL---IPWTNMTFKKEIINQN 176
Query: 177 IHSIEY-IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
I S + IKVA +G+PNVGKSTLIN +L E R+IT + PGTT DSI + +YN K Y L+
Sbjct: 177 IKSKKSPIKVAFIGRPNVGKSTLINGILKEERMITCNIPGTTLDSISTSMKYNCKDYTLV 236
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG ++ K IEKFS+IKTL++I ++NV++L+LDA I QD+++A+FI SG+
Sbjct: 237 DTAGASKKKKENNKIEKFSIIKTLQTIEKSNVILLILDASLQICHQDLSLADFIINSGKG 296
Query: 296 LIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
++V +NK D + + K +K +IKK+L FL F+ +FISA+ I +SI+ Y S
Sbjct: 297 IVVVMNKCDLLNSLEFKEVKESIKKQLKFLYFSRIHFISALYKKGIFQLFKSIHESYSES 356
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+STS +TR + AIK H P K R KL+YAH G NPP I+IHGN++KY+ YK
Sbjct: 357 KRKISTSMLTRTMHIAIKKHQPPIIKGRRIKLKYAHLGSLNPPKIIIHGNQVKYLSLPYK 416
Query: 416 RYL 418
RYL
Sbjct: 417 RYL 419
>gi|167758361|ref|ZP_02430488.1| hypothetical protein CLOSCI_00701 [Clostridium scindens ATCC 35704]
gi|336423052|ref|ZP_08603190.1| GTP-binding protein engA [Lachnospiraceae bacterium 5_1_57FAA]
gi|167664258|gb|EDS08388.1| ribosome biogenesis GTPase Der [Clostridium scindens ATCC 35704]
gi|336006399|gb|EGN36434.1| GTP-binding protein engA [Lachnospiraceae bacterium 5_1_57FAA]
Length = 442
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 254/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + K F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVLAGGMISIVKDTPGVTRDRIYADVNWLDKDFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE K I+ +M +Q + AI +D+IIFI D RQGLV+ D + + LR+SG+P+VLV+NK
Sbjct: 63 PESKDIILSQMREQAQIAIDTADVIIFITDVRQGLVDSDSKVADMLRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + + +FY LGIG+P ISA GI + L+ + P
Sbjct: 123 DNFDKFMPDVYEFYNLGIGDPVPISAASRLGIGDMLDQVAE-HFPEHG-------REEEE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++AIVGKPNVGKS++IN LLGE RVI D GTTRD+I + YN K+Y+ IDTAG
Sbjct: 175 DERPRIAIVGKPNVGKSSIINKLLGEQRVIVSDIAGTTRDAIDTDIVYNGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVLIVIDATEGVTEQDAKIAGIAHERGKGIIIV 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + + + +++ L+F+ +A ++SA +N + I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTMREYDSEVRRVLSFMPYAEIMYVSAETGQRLNKLYDKIDMVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RIATGVLNEIMAEAVAMQQPPSDKGKRLKLYYITQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|187935025|ref|YP_001885401.1| GTP-binding protein EngA [Clostridium botulinum B str. Eklund 17B]
gi|238691598|sp|B2THQ9.1|DER_CLOBB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|187723178|gb|ACD24399.1| ribosome-associated GTPase EngA [Clostridium botulinum B str.
Eklund 17B]
Length = 438
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/421 (41%), Positives = 253/421 (60%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y E +F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLNYNFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P IM +M +Q AI +D+I+FIVDG++GL D+ + N LRKS +P+VLV+NK
Sbjct: 63 PTNDDIIMKQMRRQANIAIETADVIVFIVDGKEGLTAADQEVANMLRKSKKPVVLVVNKI 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+++ S +FY LGIG+P ISA G+ + L+ ++ + +F E
Sbjct: 123 DSLKYEENSWEFYNLGIGDPITISASQALGLGDMLDRVVE---HFDRFDADAE-----ED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYI++A++GKPNVGKS+LIN LLGE R+I D GTTRD+I S E K+ILIDTAG+
Sbjct: 175 EYIRIAMIGKPNVGKSSLINKLLGEERLIVSDVAGTTRDAIDSYLETEQGKFILIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SVI+T SI +A+V IL++DAQ ++ QD I + +E +++IV V
Sbjct: 235 RRKSKVKEEIERYSVIRTYASIEKADVCILMIDAQDGVTEQDEKIIGYAHELNKAIIVLV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K +++ L F+ +A + FISA+ + +E Y++
Sbjct: 295 NKWDLVEKDDKTMEKFKKDLQGSLKFMPYAEYLFISALTGQRTHKILELAKKCYNNYNKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + AI P L R K+ YA Q PP V N Y+RYL
Sbjct: 355 VSTGILNDVISKAILMKEPPIVSLKRMKIYYATQVATKPPKFVFFVNDASASHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|429765820|ref|ZP_19298100.1| ribosome biogenesis GTPase Der [Clostridium celatum DSM 1785]
gi|429185673|gb|EKY26647.1| ribosome biogenesis GTPase Der [Clostridium celatum DSM 1785]
Length = 439
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/425 (40%), Positives = 256/425 (60%), Gaps = 19/425 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y E +F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLSHTFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + I+ +M +Q AI +D+I+F+VDG++GL D + LRKS +P+VLV+NK
Sbjct: 63 PENQDIIVKQMRRQANIAIETADVIMFVVDGKEGLTAADNEVATMLRKSKKPVVLVVNKI 122
Query: 122 ENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS- 179
+N+ + + +FY+LGIG+P ISA G G+ + L+ ++ F +I S
Sbjct: 123 DNLKDEENAWEFYKLGIGDPVAISAGLGKGLGDMLDMVVA------------HFDSIASK 170
Query: 180 ---IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
E IK+A++GKPNVGKS+LIN LLGE+R+I D GTTRD+I S E K+ LID
Sbjct: 171 EEEEEDIKIAMIGKPNVGKSSLINRLLGEDRLIVSDIAGTTRDAIDSKVETEFGKFTLID 230
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RR++K E IE++SVI+TL ++ A+V IL++DA + ++ QD I F +E +++
Sbjct: 231 TAGLRRKSKVKEEIERYSVIRTLAAVERADVCILMIDATEGVTEQDEKIIGFAHELNKAI 290
Query: 297 IVCVNKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
+V VNKWD I + + + K +++ KL F+ +A F FISA+ + +E YD+
Sbjct: 291 MVIVNKWDLIEKDDKTMDVYKKDLQSKLKFIKYAKFLFISALTGQRAHKVLEVAKECYDN 350
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ T + + AI P L R K+ YA Q PP V N + Y
Sbjct: 351 YDKRVGTGVLNDVISKAILMKEPPIVALKRLKIYYATQVATKPPKFVFFVNDVNARHFSY 410
Query: 415 KRYLE 419
+RYLE
Sbjct: 411 ERYLE 415
>gi|331081965|ref|ZP_08331093.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA]
gi|330405560|gb|EGG85090.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA]
Length = 441
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 255/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN L + ++V + PG+TRDR Y E K+F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYAEVTWLDKTFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q + AI +D+IIF+ D RQGLV+ D + + LR+S +P+VLV+NK
Sbjct: 63 PESNDVILSQMREQAQIAIDTADVIIFMTDVRQGLVDADSKVADMLRRSKKPVVLVVNKV 122
Query: 122 ENINSSI--SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + + +FY LGIG P ISA G+ + LE ++ + F + N
Sbjct: 123 DSFQKFMMDTYEFYNLGIGEPVPISAASMLGLGDMLEKVV-------EHFDD-DAQNDEE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E K+A+VGKPNVGKS+LIN +LGE+RVI + GTTRD+I + Y K+Y IDTAG
Sbjct: 175 DEIPKIAVVGKPNVGKSSLINKILGEDRVIVSNIAGTTRDAIDTKVTYQGKEYTFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA ++ G+ +++
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVVMMIDATEGVTEQDAKIAGIAHDRGKGVVIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I K N +++ L+++ +A FISA I E+I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTIYKFTNKVRETLSYMPYAEIMFISAHTGQRIPKLFETIDMVLENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A P K R K+ Y Q PP VI N + + Y RY
Sbjct: 355 RIQTGVLNEIITEATALQQPPSDKGKRLKIFYTTQVSVKPPTFVIFVNDKELMHFSYVRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|260588686|ref|ZP_05854599.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583]
gi|260541161|gb|EEX21730.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583]
Length = 441
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 256/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN L + ++V + PG+TRDR Y E K+F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYAEVTWLDKTFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q + AI +D+IIF+ D RQGLV+ D + + LR+S +P+VLV+NK
Sbjct: 63 PESNDVILSQMREQAQIAIDTADVIIFMTDVRQGLVDADSKVADMLRRSKKPVVLVVNKV 122
Query: 122 ENINSSI--SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + + +FY LGIG P ISA G+ + LE ++ + F + N
Sbjct: 123 DSFQKFMMDTYEFYNLGIGEPVPISAASMLGLGDMLEKVV-------EHFDD-DAQNDEE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E K+A+VGKPNVGKS+LIN +LGE+RVI + GTTRD+I + Y K+Y IDTAG
Sbjct: 175 DEIPKIAVVGKPNVGKSSLINKILGEDRVIVSNIAGTTRDAIDTKVTYQGKEYTFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA ++ G+ +++
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVVMMIDATEGVTEQDAKIAGIAHDRGKGVVIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I K N +++ L+++ +A FISA I + E+I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTIYKFTNKVRETLSYMPYAEIMFISAHTGQRIPNLFETIDMVLENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A P K R K+ Y Q PP VI N + + Y RY
Sbjct: 355 RIQTGVLNEIITEATALQQPPSDKGKRLKIFYTTQVSVKPPTFVIFVNDKELMHFSYVRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|442321136|ref|YP_007361157.1| GTP-binding protein EngA [Myxococcus stipitatus DSM 14675]
gi|441488778|gb|AGC45473.1| GTP-binding protein EngA [Myxococcus stipitatus DSM 14675]
Length = 459
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 251/423 (59%), Gaps = 8/423 (1%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKSTLFNRL R ALV + PG+TRDRHY + G +SF IDTGGF
Sbjct: 1 MKPLVAIVGRPNVGKSTLFNRLIGRRLALVEDMPGVTRDRHYADAEWGGRSFTFIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
P K ++ ++ +Q + A+ E D+I+F+ DGR+G+ D+ + ++LRKSG+P+++ NK
Sbjct: 61 VPGEKDSLLKQVREQAQLAVEECDVIVFVTDGREGVTAADESVASYLRKSGKPVIVAANK 120
Query: 121 SENIN---SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
+N +++ DFY+LG+G H +SA + G+ + ++ +LP K+ +
Sbjct: 121 LDNTTGTMQALAADFYKLGLGEVHPMSAEHNLGVNGLFDEVVE-KLPPKEEGEGDAAPPD 179
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
I I+VAI+G+PNVGKSTL+N++L E RV+ D PGTTRD I S Y +K +L DT
Sbjct: 180 DGI--IRVAIIGRPNVGKSTLVNAILKEKRVVASDVPGTTRDPIDSPLTYKGRKLLLTDT 237
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AGIRR+ + +EK+SV+ LK + ++V +LL+DA + QD +A E GR+L+
Sbjct: 238 AGIRRKKTIAQQVEKYSVVAALKVMERSDVAVLLMDATEPAVDQDAKLAGLAEERGRALV 297
Query: 298 VCVNKWDSIIHNQRK--IIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD + ++ R+ + ++K L F+ +A F SA+ + + ++ +
Sbjct: 298 IVVNKWDLVDNDARRQDAYRESLKHALKFVGYAPILFTSALTGSKVEKVVDVAVELAQQF 357
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
T ++ R L + N+P K +L Y Q PP + N+ + + + YK
Sbjct: 358 RFRAPTPQLNRLLEHMVDNNPAPIVKSKPLRLYYIAQVAAAPPTFTVTCNQPEGVPDMYK 417
Query: 416 RYL 418
RY+
Sbjct: 418 RYI 420
>gi|182418977|ref|ZP_02950233.1| GTP-binding protein EngA [Clostridium butyricum 5521]
gi|237668464|ref|ZP_04528448.1| ribosome-associated GTPase EngA [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182377260|gb|EDT74828.1| GTP-binding protein EngA [Clostridium butyricum 5521]
gi|237656812|gb|EEP54368.1| ribosome-associated GTPase EngA [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 438
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 258/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFNRL R ++V + PG+TRDR Y E +F +IDTGG E
Sbjct: 3 KPIVAMVGRPNVGKSTLFNRLAGKRISIVQDTPGVTRDRVYAEAEWLTHTFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q AI +D+I+FIVDG++GL D + LRKS +P+VLV+NK
Sbjct: 63 PERNDIIVQQMRRQANIAIETADVIVFIVDGKEGLTAADHEVATMLRKSKKPVVLVVNKV 122
Query: 122 ENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+++ + +FY LGIG+P ISA G G+ + L+ + +E +++ E
Sbjct: 123 DSLKEEDNAWEFYNLGIGDPITISASQGLGLGDMLDRV--VENFDSSIYEQDED------ 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYI++A++GKPNVGKS+LIN LLGE+RVI + GTTRD+I S E K+ILIDTAG+
Sbjct: 175 EYIRIAMIGKPNVGKSSLINKLLGEDRVIVSEVAGTTRDAIDSELETEEGKFILIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SV++T +I ++V IL++DAQ+ I+ QD I + +E +++++ V
Sbjct: 235 RRKSKVKEEIERYSVVRTYAAIERSDVCILMIDAQEGITEQDEKIIGYAHEMRKAIMIIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K +++ KL F+++A + FISA+ + ++ YD+
Sbjct: 295 NKWDLVEKDDKTLDNFKRDLQGKLKFINYAEYLFISALTGQRTHKVLQMARKCYDNYNKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + A+ P L R K+ YA Q PP V N + Y+RY+
Sbjct: 355 VSTGILNDVISKAVLMKEPPVVGLKRMKIYYATQVATRPPKFVFFVNDSEARHFSYERYI 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|197302999|ref|ZP_03168047.1| hypothetical protein RUMLAC_01725 [Ruminococcus lactaris ATCC
29176]
gi|197297854|gb|EDY32406.1| ribosome biogenesis GTPase Der [Ruminococcus lactaris ATCC 29176]
Length = 442
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 260/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADVDWLDREFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ + I+ +M +Q + AI +D+IIFI D +QGLV+ D + + LR+SG+P+VLV+NK
Sbjct: 63 PDSRDIILSQMREQAQIAIDTADVIIFITDVKQGLVDSDSKVADMLRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + ++ +FY LGIG+P ISA G+ + L+ ++ F + + T
Sbjct: 123 DNFDKYMADVYEFYNLGIGDPIPISAASRLGLGDMLDAVIA-------HFPESDGTE-ED 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +VAIVGKPNVGKS++IN LLGENRVI D GTTRD+I + +N K+Y+ IDTAG
Sbjct: 175 DDRPRVAIVGKPNVGKSSIINRLLGENRVIVSDIAGTTRDAIDTEIVHNGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEELERYSIIRTVSAVERADVVLMVIDATEGVTEQDAKIAGIAHERGKGVIIV 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + + + I++ L+++ +A ++SA+ + + I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTMREYEAKIRQVLSYMPYAEIMYVSAMTGQRLPKLYDMIDMVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RIATGVLNEIMTEAVAMQQPPSDKGKRLKLYYITQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|188587902|ref|YP_001920548.1| GTP-binding protein EngA [Clostridium botulinum E3 str. Alaska E43]
gi|238689667|sp|B2V3Z1.1|DER_CLOBA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|188498183|gb|ACD51319.1| ribosome-associated GTPase EngA [Clostridium botulinum E3 str.
Alaska E43]
Length = 438
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 253/421 (60%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y E +F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLNYNFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P IM +M +Q AI +D+I+FIVDG++GL D+ + N LRKS +P+VLV+NK
Sbjct: 63 PTNDDIIMKQMRRQANIAIETADVIVFIVDGKEGLTAADQEVANMLRKSKKPVVLVVNKI 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+++ S +FY LGIG+P ISA G+ + L+ ++ + +F E
Sbjct: 123 DSLKYEENSWEFYNLGIGDPITISASQALGLGDMLDKVVE---HFDRFDADAE-----DD 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYI++A++GKPNVGKS+LIN LLGE R+I D GTTRD+I S E K+ILIDTAG+
Sbjct: 175 EYIRIAMIGKPNVGKSSLINKLLGEERLIVSDVAGTTRDAIDSYLETEQGKFILIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SVI+T SI +A+V IL++DAQ ++ QD I + +E ++++V V
Sbjct: 235 RRKSKVKEEIERYSVIRTYASIEKADVCILMIDAQDGVTEQDEKIIGYAHELNKAIMVLV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K +++ L F+ +A + FISA+ + +E Y++
Sbjct: 295 NKWDLVEKDDKTMEKFKKDLQGSLKFMPYAEYLFISALTGQRTHKILELAKKCYNNYNKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + AI P L R K+ YA Q PP V N Y+RYL
Sbjct: 355 VSTGILNDVISQAILMKEPPIVSLKRMKIYYATQVATKPPKFVFFVNDASASHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|251778692|ref|ZP_04821612.1| ribosome-associated GTPase EngA [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243083007|gb|EES48897.1| ribosome-associated GTPase EngA [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 438
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 253/421 (60%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y E +F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRVYAEAEWLNYNFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P IM +M +Q AI +D+I+FIVDG++GL D+ + N LRKS +P+VLV+NK
Sbjct: 63 PTNDDIIMKQMRRQANIAIETADVIVFIVDGKEGLTAADQEVANMLRKSKKPVVLVVNKI 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+++ S +FY LGIG+P ISA G+ + L+ ++ + +F E
Sbjct: 123 DSLKYEENSWEFYNLGIGDPITISASQALGLGDMLDRVVE---HFDRFDADAE-----DD 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYI++A++GKPNVGKS+LIN LLGE R+I D GTTRD+I S E K+ILIDTAG+
Sbjct: 175 EYIRIAMIGKPNVGKSSLINKLLGEERLIVSDVAGTTRDAIDSYLETEQGKFILIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SVI+T SI +A+V IL++DAQ ++ QD I + +E ++++V V
Sbjct: 235 RRKSKVKEEIERYSVIRTYASIEKADVCILMIDAQDGVTEQDEKIIGYAHELNKAIMVLV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K +++ L F+ +A + FISA+ + +E Y++
Sbjct: 295 NKWDLVEKDDKTMEKFKKDLQGSLKFMPYAEYLFISALTGQRTHKILELAKKCYNNYNKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + AI P L R K+ YA Q PP V N Y+RYL
Sbjct: 355 VSTGILNDVISQAILMKEPPIVSLKRMKIYYATQVATKPPKFVFFVNDASASHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|302391816|ref|YP_003827636.1| ribosome-associated GTPase EngA [Acetohalobium arabaticum DSM 5501]
gi|302203893|gb|ADL12571.1| ribosome-associated GTPase EngA [Acetohalobium arabaticum DSM 5501]
Length = 438
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/424 (37%), Positives = 267/424 (62%), Gaps = 16/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFNR+ +R ++V + P +TRDR YGEG F+++DTGG +
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRIVGNRISIVEDEPSITRDRLYGEGEWLDNHFLVVDTGGLD 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK- 120
+ + + E+ +Q + AI E+++++F+VDGR G+ D+ + N LR+S +PI+L +NK
Sbjct: 63 LDSEAELKDEVRQQAELAIEEAEVVLFVVDGRTGIKPMDREVANLLRRSNKPIILTVNKV 122
Query: 121 -SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
S+ + + DFYELG+G P ISA + + L+ +++ F +E T +
Sbjct: 123 DSKELEEKVKYDFYELGLGEPVAISAKHALNTGDLLDEVIS-------HFSTEE-TGEYD 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I+++++G+PNVGKS+L+NS+LG+ RVI D PGTTRD+I + FE + ++++IDTAG
Sbjct: 175 EDTIRISVIGRPNVGKSSLVNSILGKERVIVNDVPGTTRDAIDTYFEVGDNQFVIIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R+K IEK+SVI++LK++ ++V +++LDA Q I+ QD IA + ++ G+++++
Sbjct: 235 MRKRSKVEAGIEKYSVIRSLKAVDRSDVALMVLDATQGITQQDKKIAGYAHDQGKAMVIA 294
Query: 300 VNKWDSIIH----NQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
VNKWD I +QR + I+ + +F+++A F+SA+ + ++ + + +
Sbjct: 295 VNKWDLIKKETNIDQR--YADEIRYEASFINYAPITFVSALTGQRVLEILDIVEYAAEQY 352
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ T+ + + AI H P +K R K+ YA Q PP+I++ N + YK
Sbjct: 353 SRRIKTNVLNNVIKEAISKHQPPSQKGRRLKVYYATQPRVKPPLIILFVNDPTLLRQSYK 412
Query: 416 RYLE 419
RYL+
Sbjct: 413 RYLK 416
>gi|238916971|ref|YP_002930488.1| GTP-binding protein EngA [Eubacterium eligens ATCC 27750]
gi|259645875|sp|C4Z0C8.1|DER_EUBE2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238872331|gb|ACR72041.1| GTP-binding protein [Eubacterium eligens ATCC 27750]
Length = 441
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 254/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN L + ++V + PG+TRDR Y E +F +IDTGG E
Sbjct: 3 KPIVAVVGRPNVGKSTLFNSLCGQQISIVKDTPGVTRDRIYAEVSWLNHNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+IIF+ D +QGLV+ D + + LR+S +P++LV+NK
Sbjct: 63 PDTGDIILSQMREQAEIAIETADVIIFMTDVKQGLVDSDSKVADMLRRSHKPVILVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LGIG P ISA+ G L+ +++ P K++
Sbjct: 123 DSFEKMMPDVYEFYNLGIGEPFPISAVNKLGFGEVLDEVVS-HFPEGSDTDKED------ 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ KVAI+GKPNVGKS++IN L+G+NRVI D GTTRD+I + +YN K+Y+ IDTAG
Sbjct: 176 -DRPKVAIIGKPNVGKSSIINKLVGKNRVIVSDIAGTTRDAIDTAIKYNGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E+FS+I+T+ ++ A++ IL++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKSKIKEDLERFSIIRTVAAVERADIAILVIDATEGVTEQDAKIAGIAHERGKGIIIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I N + I + N IK L F+S+A F+SA +N E ++H+ D+ +
Sbjct: 295 VNKWDDIEKNDKTIYEFTNKIKDTLAFMSYAEIIFVSAKTGQRLNKIYELVDHIVDAQTM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + L A+ P K R K+ Y Q PP V+ N + Y RY
Sbjct: 355 RIPTGVLNEILTEAVAMKQPPSDKGKRLKIYYMTQVSVKPPTFVMFVNDVALTHFSYTRY 414
Query: 418 LE 419
+E
Sbjct: 415 IE 416
>gi|338535032|ref|YP_004668366.1| GTP-binding protein Der [Myxococcus fulvus HW-1]
gi|337261128|gb|AEI67288.1| GTP-binding protein Der [Myxococcus fulvus HW-1]
Length = 459
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 251/425 (59%), Gaps = 12/425 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKSTLFNRL R ALV + PG+TRDRHY + + F IDTGGF
Sbjct: 1 MKPLVAIVGRPNVGKSTLFNRLAGRRLALVQDEPGVTRDRHYADAEWEGRHFTFIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
P + ++ ++ +Q + A+ E D+I+F+ D R GL D+ + +LRKSG+P+VL NK
Sbjct: 61 VPGDEDQLLQQVREQAQLAVDECDVIVFVTDARAGLTAADEAVATYLRKSGKPVVLAANK 120
Query: 121 SENINS---SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
+N + S++ +FY LG+G+ +SA +G G++ + +++ +LP K+ + E
Sbjct: 121 LDNTSGQMLSLAGEFYRLGLGDVQALSAEHGLGMQELFDAVVS-KLPPKEEGEDAEAPPD 179
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
I I++AI+G+PNVGKSTL+N++L E RV+ + GTTRD + S Y ++K +L DT
Sbjct: 180 DGI--IRLAIIGRPNVGKSTLVNAILKEKRVVASEVAGTTRDPVDSELTYKDRKLLLTDT 237
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AGIRR+ + +E+FSV+ LK + ++V +LL+DA + QD +A E GR+L+
Sbjct: 238 AGIRRKKSIAQRVEQFSVVAALKVMERSDVAVLLMDATEPAVDQDAKLAGLAEERGRALV 297
Query: 298 VCVNKWDSIIHNQRK--IIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD + +QR+ + ++K L F+ +A F SA+ + + ++ + D
Sbjct: 298 IVVNKWDLVGADQRRQETYRESLKYALKFVGYAPILFTSALTGSKVEKVVDVATELADQF 357
Query: 356 IIHLSTSRITRALISAIKNHPP--CRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
T ++ R L + NHP R K +R L Y Q PP I N + +
Sbjct: 358 RFRAPTPQLNRLLEHMVDNHPAPIVRGKPLR--LYYIAQVAAAPPTFTITVNHPDGVPDM 415
Query: 414 YKRYL 418
YKRY+
Sbjct: 416 YKRYI 420
>gi|15894988|ref|NP_348337.1| GTP-binding protein EngA [Clostridium acetobutylicum ATCC 824]
gi|337736929|ref|YP_004636376.1| GTP-binding protein EngA [Clostridium acetobutylicum DSM 1731]
gi|384458436|ref|YP_005670856.1| GTP-binding protein EngA [Clostridium acetobutylicum EA 2018]
gi|26006729|sp|Q97ID7.1|DER_CLOAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|15024676|gb|AAK79677.1|AE007680_10 Predicted GTPase [Clostridium acetobutylicum ATCC 824]
gi|325509125|gb|ADZ20761.1| GTP-binding protein EngA [Clostridium acetobutylicum EA 2018]
gi|336292799|gb|AEI33933.1| GTP-binding protein EngA [Clostridium acetobutylicum DSM 1731]
Length = 438
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/422 (42%), Positives = 260/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEG-YIGKKSFIIIDTGGF 60
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y E ++GKK F IIDTGG
Sbjct: 3 KPLVTIVGRPNVGKSTLFNKLAGKRVSIVEDTPGVTRDRIYAESEWVGKK-FTIIDTGGI 61
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EPE I+ +M +Q + AI SD+IIF+VDG+QGL + D + LRKS +PIVLV+NK
Sbjct: 62 EPENNDIILTQMRRQAQIAIEMSDVIIFMVDGKQGLTDTDNEVAIMLRKSKKPIVLVVNK 121
Query: 121 -SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N+ + +FY LGIG+P IS+ G GI + L+ ++ KF K E +
Sbjct: 122 IDKNVEENNIYEFYNLGIGDPVSISSSQGLGIGDMLDEVVN------KF--KSEGEDEEE 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
EYIK+A VGKPNVGKS+L N +LGE RVI D PGTTRD+I S E + K +LIDTAG
Sbjct: 174 EEYIKIAFVGKPNVGKSSLTNRILGEERVIVSDIPGTTRDAIDSFLETDFGKLVLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+++ E IE++S ++T+ +I +V L+LDA + IS QD I + +E+ ++++V
Sbjct: 234 LRRKSRIKEEIERYSAVRTMAAIERCDVCTLILDATEPISEQDERIIGYAHENNKAILVI 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + K N++ K +F+++A F FISA ++ + I YD+
Sbjct: 294 VNKWDLIEKDDKTMENFKKNLEMKFSFMAYAPFLFISAKTGQRVHKVLSEIKKCYDNYSK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + +A+ P R K+ Y Q PP + N + + Y+RY
Sbjct: 354 RIATGVLNDVISNAVLMKEPPVVAFKRLKIFYVTQTDIKPPTFIFFVNNPELLHFSYRRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|420374394|ref|ZP_14874386.1| GTPase Der, partial [Shigella flexneri 1235-66]
gi|391316299|gb|EIQ73755.1| GTPase Der, partial [Shigella flexneri 1235-66]
Length = 433
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 240/379 (63%), Gaps = 29/379 (7%)
Query: 65 KKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENI 124
+ G+ M +Q+ AI E+D+++F+VD R GL+ D+ I LR +P V+NK++ +
Sbjct: 7 EDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFPVVNKTDGL 66
Query: 125 NSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY- 182
+ ++ DFY LG+G + I+A +G G+ + LE++L LP+ + +E + EY
Sbjct: 67 DPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL---LPWMEDLAPQEEVD-EDAEYW 122
Query: 183 -----------------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
IK+AIVG+PNVGKSTL N +LGE RV+ YD PGTTRD
Sbjct: 123 AQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRD 182
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
SI E + ++Y+LIDTAG+R+R K + +EKFSVIKTL++I +ANVV+L++DA++ IS
Sbjct: 183 SIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGIS 242
Query: 280 AQDINIANFIYESGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLN 339
QD+++ FI SGRSL++ VNKWD + ++ +K + +L F+ FA +FISA+ +
Sbjct: 243 DQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGS 302
Query: 340 NINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPI 399
+ + ES+ YDSS + TS +TR + A+++H P + R KL+YAH GG NPPI
Sbjct: 303 GVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPI 362
Query: 400 IVIHGNRLKYIGNDYKRYL 418
+VIHGN++K + + YKRYL
Sbjct: 363 VVIHGNQVKDLPDSYKRYL 381
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 97/168 (57%), Gaps = 18/168 (10%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
L +VGRPNVGKSTL NR+ +V + PG TRD Y + +++IDT G
Sbjct: 148 LAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVR--- 204
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
K+G + + + +T QAI ++++++ ++D R+G+ +QD + F+ SG+ +V+V+N
Sbjct: 205 KRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVN 264
Query: 120 KSENINSSI------SLDFYELG---IGNPHIISALYGNGIKNFLENI 158
K + ++ + +LDF LG H ISAL+G+G+ N E++
Sbjct: 265 KWDGLSQEVKEQVKETLDF-RLGFIDFARVHFISALHGSGVGNLFESV 311
>gi|326204998|ref|ZP_08194849.1| ribosome-associated GTPase EngA [Clostridium papyrosolvens DSM
2782]
gi|325984864|gb|EGD45709.1| ribosome-associated GTPase EngA [Clostridium papyrosolvens DSM
2782]
Length = 441
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/426 (40%), Positives = 253/426 (59%), Gaps = 20/426 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST FN L SR ++V + PG+TRDR Y E F +IDTGG E
Sbjct: 3 KPVVAVVGRPNVGKSTFFNYLAGSRISIVEDTPGVTRDRIYTEIEWRSTKFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P + IM +M +Q + AI +D+I+F+VDG+ G+ DK + LRKS +P+VL +NK
Sbjct: 63 PYSEDIIMQQMKRQAEIAIETADVIVFMVDGKDGMTATDKEVATMLRKSQKPVVLCVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ I +FY LG+G+ IIS+++G G+ + L+ I ++ F + +
Sbjct: 123 DRIGEPPPDVYEFYNLGMGDMQIISSVHGLGMGDLLDAI------FEHFPEDTDAEEDED 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IKVA+VGKPN GKS+LINS+LGENRVI + PGTTRD+I + E + +KY IDTAG
Sbjct: 177 V--IKVAVVGKPNAGKSSLINSILGENRVIVSNIPGTTRDAIDTHVEMDGQKYTFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR+R+K E IEK+S I++ +I A+V ++++DA+ ++ QD IA + ++ G++ I+
Sbjct: 235 IRKRSKINETIEKYSTIRSWTAIERADVCLIMIDAEDGVTEQDTKIAGYAHQQGKASIIV 294
Query: 300 VNKWDSI------IHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
VNKWD I + RK+ + +KL F+++A FISA +N E I V D
Sbjct: 295 VNKWDLIEKQTGTLEEYRKV----VHEKLGFMTYAPVLFISAKTGQRVNKIYELIKFVAD 350
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
+ +ST + + A+ P K R K+ Y Q G PP VI N L
Sbjct: 351 QAAFRISTGMLNDLVNEAVAMVQPPSDKGKRLKIYYMTQVGIKPPAFVIFVNDLDLFHYS 410
Query: 414 YKRYLE 419
Y+RYLE
Sbjct: 411 YERYLE 416
>gi|225374467|ref|ZP_03751688.1| hypothetical protein ROSEINA2194_00082 [Roseburia inulinivorans DSM
16841]
gi|225213705|gb|EEG96059.1| hypothetical protein ROSEINA2194_00082 [Roseburia inulinivorans DSM
16841]
Length = 449
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 258/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L R ++V + PG+TRDR Y E +F +IDTGG E
Sbjct: 10 KPVVAIVGRPNVGKSTLFNALAGERISIVQDTPGVTRDRIYAEVSWLDHNFTMIDTGGIE 69
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+I+FIVD RQGL + D + + LR+SG+P+VLV+NK
Sbjct: 70 PDSNDIILSQMREQAEIAIATADVIMFIVDVRQGLQDSDSKVADMLRRSGKPVVLVVNKV 129
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ +FY LGIG+P +SA G+ + L+ ++ YKK +
Sbjct: 130 DSFEKYMADVYEFYNLGIGDPFPVSAASMLGLGDMLDEVVKYFPEYKK--------DDEE 181
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ K+AI+GKPNVGKS+LIN L E+RVI D GTTRD+I + +YN K+Y+ IDTAG
Sbjct: 182 DDRPKIAIIGKPNVGKSSLINKLAQEDRVIVSDIAGTTRDAIDTDIKYNGKEYVFIDTAG 241
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E IE++S+I+ + ++ A+V I+++DA + ++ QD IA ++ G+ +I+
Sbjct: 242 LRRKNKIKEEIERYSIIRAVTAVERADVCIIVIDATEGVTEQDAKIAGIAHDRGKGIIIA 301
Query: 300 VNKWDSIIHNQRKIIKNN--IKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + + I ++ I+ L+F+ +A FISA +N E+I+ V +++ +
Sbjct: 302 VNKWDAIEKDDKTIYRHTEKIRDILSFMPYAEIIFISAKSGQRLNKIFETIDVVIENNSM 361
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R ++ Y Q PP VI N + + Y RY
Sbjct: 362 RVATGVLNEIVTEAVAMQQPPSDKGKRLRIYYTTQVSVKPPTFVIFVNDKQLMHFSYTRY 421
Query: 418 LE 419
LE
Sbjct: 422 LE 423
>gi|336430698|ref|ZP_08610637.1| GTP-binding protein engA [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336016791|gb|EGN46567.1| GTP-binding protein engA [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 445
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 260/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + ++F +IDTGG E
Sbjct: 7 KPIVAVVGRPNVGKSTLFNALAGEMISIVKDSPGITRDRIYADVTWLDRAFTLIDTGGIE 66
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+I+F+VD +QGLV+ D + + LR+S +P+VLV+NK
Sbjct: 67 PDSSDIILSQMREQAQIAIDTADVILFMVDVKQGLVDSDSKVADMLRRSHKPVVLVVNKV 126
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + ++ +FY LGIG+P+ ISA GI + L+ ++ + F + E +
Sbjct: 127 DSFDKFMADVYEFYNLGIGDPNPISAANRMGIGDLLDEVI------RHFPDRSEAED--E 178
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AIVGKPNVGKS++IN L+GENRVI D GTTRD+I + +N K+YI IDTAG
Sbjct: 179 DDRPRIAIVGKPNVGKSSIINKLIGENRVIVSDIAGTTRDAIDTEVVHNGKEYIFIDTAG 238
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++ +++T+ ++ A+VV+L++DAQ+ ++ QD IA +E G+ +I+
Sbjct: 239 LRRKNKIKEELERYMIVRTVGAVERADVVVLVIDAQEGVTEQDAKIAGIAHERGKGMIIA 298
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + + I + ++ L F+ +A FISA + E+I+ V ++ +
Sbjct: 299 VNKWDAIEKDDKTIYRFQEKVRNTLAFMPYAEIIFISAKTGQRLPKLFETIDAVIENHAL 358
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R +L Y Q PP VI N + + Y RY
Sbjct: 359 RIATGVLNEIMAEAVAMQQPPSDKGKRLRLYYITQAAVKPPTFVIFVNDKELMHFSYTRY 418
Query: 418 LE 419
+E
Sbjct: 419 IE 420
>gi|398813287|ref|ZP_10571986.1| ribosome-associated GTPase EngA [Brevibacillus sp. BC25]
gi|398038948|gb|EJL32094.1| ribosome-associated GTPase EngA [Brevibacillus sp. BC25]
Length = 437
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 260/420 (61%), Gaps = 11/420 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
PV+ +VGRPNVGKST+FNRL R A+V + PG+TRDR YG+G +F +IDTGG E
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLIGQRVAIVEDMPGVTRDRLYGKGEWLTHTFHVIDTGGIEF 63
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
I+ +M Q + AI E+D+II I D R G+ + D ++ L ++G+P+VL +NK++
Sbjct: 64 GETDEILTQMRYQAELAIDEADVIIMIADSRTGVTDADVELSRMLNRTGKPVVLAVNKAD 123
Query: 123 NINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
N + DFY LG+G P +S +G G+ + LE+++ P + +K++ +
Sbjct: 124 NPEMRADIYDFYSLGLGEPFPVSGSHGLGLGDMLEDVVQ-HFPAEDDEEKRD-------D 175
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
I+V+I+G+PNVGKS+L N+LLGE RVI D GTTRD+I + FE +++ YIL+DTAG+R
Sbjct: 176 VIRVSIIGRPNVGKSSLTNALLGEERVIVSDVAGTTRDAIDTPFERDDQSYILVDTAGMR 235
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
+R K +E EK+SV++ ++SI +++VV++++D ++ I QD IA + +E+GR +I+ VN
Sbjct: 236 KRGKVYETTEKYSVMRAMRSIEDSDVVLVVIDGEEGIIEQDKKIAGYAHEAGRGVIIIVN 295
Query: 302 KWDSIIHNQRKIIKNN--IKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD++ + + + + I+++ +L +A ++SA +++ + +N V + + +
Sbjct: 296 KWDAVEKDDKTMQRFTELIREEFKYLHYAPILYVSAKSKQRVHTILPKVNEVSQAHAMRV 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
TS + + A PP + R K+ Y Q PP ++ N + + Y+RY+E
Sbjct: 356 PTSVLNDLVTDATIRTPPPSDRGKRLKINYTTQATVKPPTFILFVNDPELMHFSYERYIE 415
>gi|338739998|ref|YP_004676960.1| GTP-binding protein EngA, GTPase [Hyphomicrobium sp. MC1]
gi|337760561|emb|CCB66394.1| GTP-binding protein EngA, GTPase [Hyphomicrobium sp. MC1]
Length = 489
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 169/430 (39%), Positives = 246/430 (57%), Gaps = 14/430 (3%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
PV+ +VGRPNVGKSTLFNRLT +R ALV++ PGLTRDR G + ++DT G E
Sbjct: 31 PVVAIVGRPNVGKSTLFNRLTATRAALVSDLPGLTRDRREGIANLFGVDVRLVDTAGLEE 90
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ I M KQ++QAI E+D+++F++D R G+ D R+SG+P+VLV NK+E
Sbjct: 91 AQRGSIADRMRKQSEQAISEADLVLFVIDARAGVTSADTGFARIARQSGKPVVLVANKAE 150
Query: 123 -NINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTI----ELPYKKFFKK------ 171
N + LD + LG+G P ISA +G GI + E++L P K +K
Sbjct: 151 GNKGTDGVLDAFSLGLGAPIAISAEHGEGIGDLAEDMLAALGLKSAPTTKKRRKGDDAEE 210
Query: 172 -KEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNK 230
K ++ I+VAIVG+PN GKSTL+N+LLGE R+IT PG TRDS+ + FE+ +
Sbjct: 211 EKPIERPAVVKPIRVAIVGRPNAGKSTLVNALLGEERMITGPEPGLTRDSVSTDFEWKGQ 270
Query: 231 KYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIY 290
K L DTAG+RR+ K E EK S +++I A VV+LL+DA++ QD+ I + +
Sbjct: 271 KIRLFDTAGLRRKAKITETAEKLSASDAVRAIRFAEVVVLLIDAERPFEHQDLTIGHRVT 330
Query: 291 ESGRSLIVCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
E GR+L+V VNKWD + Q+ + +K + + L + F ISA + ++ M +I
Sbjct: 331 EEGRALVVAVNKWDLVEEKQKTLRELKKTVAESLAQVPDVPFVAISARSESGLDQLMTAI 390
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ +Y + +ST ++ R L A+ H P R K+RY Q PP V R +
Sbjct: 391 SKIYATWNRRVSTPQLNRWLNEALSRHSPPAVHGKRIKIRYVTQPSTRPPTFVAFSQRAE 450
Query: 409 YIGNDYKRYL 418
+ Y +YL
Sbjct: 451 ALPQSYVKYL 460
>gi|153853314|ref|ZP_01994723.1| hypothetical protein DORLON_00710 [Dorea longicatena DSM 13814]
gi|149754100|gb|EDM64031.1| ribosome biogenesis GTPase Der [Dorea longicatena DSM 13814]
Length = 442
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 256/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + K F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADVTWLDKEFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE K I+ +M +Q + AI +D+IIFI D RQGLV+ D + + LR+SG+P+VL +NK
Sbjct: 63 PESKDIILSQMREQAQIAIDTADVIIFITDVRQGLVDADSKVADMLRRSGKPVVLAVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + + +FY LGIG+P +SA GI + L+ ++ P +
Sbjct: 123 DNFDKFMPDVYEFYNLGIGDPVPVSAASRLGIGDMLDAVIA-HFPEHE-------AEEKE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E +VAIVGKPNVGKS++IN L G+ RVI D GTTRD+I + +YN K Y+ IDTAG
Sbjct: 175 DERPRVAIVGKPNVGKSSIINKLTGKQRVIVSDVAGTTRDAIDTNVKYNGKDYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKSKIKEELERYSIIRTVTAVERADVVLVVIDATEGVTEQDAKIAGIAHERGKGIIIV 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + + +NN+++ L+F+ +A ++SA +N + I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTMREYENNVRRVLSFMPYAEIMYVSAETGQRLNKLYDMIDMVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RVATGVLNEIMTEAVAMQQPPSDKGKRLKLYYITQVAVKPPSFVIFVNNKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|293115597|ref|ZP_05792245.2| ribosome-associated GTPase EngA [Butyrivibrio crossotus DSM 2876]
gi|292809015|gb|EFF68220.1| ribosome-associated GTPase EngA [Butyrivibrio crossotus DSM 2876]
Length = 446
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 259/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L + ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 8 KPVVAIVGRPNVGKSTLFNALAGEQISIVKDTPGVTRDRIYADVTWLNYNFTLIDTGGIE 67
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE K I+ +M +Q + AI +D+IIF+VD RQGLV+ D + N LR+SG+P+VLV+NK
Sbjct: 68 PESKDIILSQMREQAEIAIASADVIIFMVDVRQGLVDSDSKVANMLRRSGKPVVLVVNKV 127
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ +FY LGIG+P +S++ GI + L+ ++ K F + +
Sbjct: 128 DSFQKMMTDVYEFYNLGIGDPVPVSSVGKLGIGDMLDEVV-------KHFPESAAEDEED 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVGKPNVGKS++IN ++GE+RVI D GTTRD+I + YN +Y+ IDTAG
Sbjct: 181 ERP-RIAIVGKPNVGKSSIINKIVGESRVIVSDIAGTTRDAIDTDITYNGNEYVFIDTAG 239
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +IV
Sbjct: 240 LRRKNKIKEELERYSIIRTVTAVERADVVLVVIDATEGVTEQDAKIAGIAHERGKGIIVV 299
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I + N IK L+F+ +A FISA + ++I+ V ++ +
Sbjct: 300 VNKWDAIEKNDKTIYEHTNRIKDILSFMPYAEILFISAKTGQRVGKIFDTIDMVIENQNL 359
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + L A+ P K R K+ Y Q PP VI N + + Y RY
Sbjct: 360 RIQTGVLNEILSEAVAMQQPPSDKGKRLKIFYMTQVSVKPPTFVIFVNNKELMHFSYTRY 419
Query: 418 LE 419
LE
Sbjct: 420 LE 421
>gi|114566850|ref|YP_754004.1| hypothetical protein Swol_1325 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337785|gb|ABI68633.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 441
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 261/422 (61%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ +VGRPNVGKSTLFNRL +R A+V + PG+TRDR Y + FIIIDTGG
Sbjct: 1 MKPVVAIVGRPNVGKSTLFNRLAGARKAIVEDIPGVTRDRLYDSSDWNGREFIIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E+ Q + AI E+D+I+ ++D R+G+ +D+ + N LRKS +P+VL NK
Sbjct: 61 RFNEGDIFAREIKLQAELAIEEADVIVLVLDSREGITAEDEQVANLLRKSNKPVVLAANK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + +FY+LG+G+P +SA++G L+ +++ P ++ ++ +
Sbjct: 121 VEEFKKQLDYYEFYKLGLGDPIPVSAMHGYNTNELLDAVISHFKPALEYEEEGD------ 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IK+AIVG+PNVGKS+L+N+LLGE RVI D PGTTRD+I + F++ + Y+LIDTAG
Sbjct: 175 --AIKIAIVGRPNVGKSSLVNALLGEERVIVSDVPGTTRDAIDTPFQFKGQNYLLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+++ E E++SVI+TLK+I A+VV+++LDA + ++ QD IA +++E R+ I+
Sbjct: 233 MRRKSRIKETTERYSVIRTLKAIERADVVLIMLDATEGVAEQDKKIAGYVHEQSRANIIV 292
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + + +I+++L FLS++ ++SA+ I +E +N V +
Sbjct: 293 VNKWDLVEKDGQTMNRFDKDIREELKFLSYSPIMYVSALTKKRIFQVLEIVNFVAEQHHR 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T+ + + + A+ +P R K+ Y+ Q PP V N+ + + Y RY
Sbjct: 353 RVNTAELNQVINEAMMLNPLPGGGGKRIKILYSTQVRVAPPTFVFFSNKPEMVHFSYLRY 412
Query: 418 LE 419
LE
Sbjct: 413 LE 414
>gi|331090851|ref|ZP_08339697.1| GTP-binding protein engA [Lachnospiraceae bacterium 2_1_46FAA]
gi|330399710|gb|EGG79372.1| GTP-binding protein engA [Lachnospiraceae bacterium 2_1_46FAA]
Length = 442
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 258/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN L ++V + PG+TRDR Y E K F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYAEVNWLDKEFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ K I+ +M +Q + AI +D+IIF+ D +QGLV+ D + + LR+SG+P+VLV+NK
Sbjct: 63 PDSKDIILSQMREQAQIAIDTADVIIFLTDVKQGLVDSDSKVADMLRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ +FY LGIG+P ISA GI + L+ ++ K F +
Sbjct: 123 DSFQKFMADVYEFYNLGIGDPFPISASSRLGIGDMLDEVV-------KHFPETTAEEAED 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AIVGKPNVGKS++IN L G+NRVI D GTTRD+I + YN K+Y+ IDTAG
Sbjct: 176 -DRPRIAIVGKPNVGKSSIINKLQGDNRVIVSDIAGTTRDAIDTPITYNGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVLIVIDATEGVTEQDAKIAGIAHERGKGIIIV 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + + + + +++ L+++ +A ++SA +N E I+ V ++ +
Sbjct: 295 VNKWDAIEKHDKTMYEYEKQVRQVLSYMPYAEIMYVSAHTGQRLNKLYEKIDMVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + ++ A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RVATGVLNEIMMEAVAMQQPPSDKGKRLKLYYITQVSVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|414154804|ref|ZP_11411121.1| GTPase involved in ribosome synthesis and maintenance
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453635|emb|CCO09025.1| GTPase involved in ribosome synthesis and maintenance
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 438
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 263/420 (62%), Gaps = 11/420 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFNR+ +R A+V + PG+TRDR Y + + F ++DTGG +
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRIVGARIAIVEDMPGVTRDRLYQDAEWRGQEFTLVDTGGLD 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I ++ KQ + AI E+D ++F+VD R+G+ D+ + LRK+ +P++LV NK
Sbjct: 63 -FAEDVITSQIRKQAELAIKEADAVLFVVDAREGVTALDEEVARSLRKTDKPVLLVANKV 121
Query: 122 ENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
E + +FY+LG+G P +SA G + L+ ++ + P ++ + + +
Sbjct: 122 EQFDKIPYYEFYQLGLGEPIPVSAAEGLNTGDLLDELVALLPPQEE--------DPYPPD 173
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
+++A++G+PNVGKS+L+N++LGE RVI + PGTTRD+I + FE N K Y++IDTAG+R
Sbjct: 174 TVRIAVIGRPNVGKSSLVNAILGEERVIVSNIPGTTRDAIDTPFERNGKNYVIIDTAGMR 233
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
RRN+ E++SV++ L++I +VV++++DA + ++ QD I + +E G+++++ VN
Sbjct: 234 RRNRIDLPAERYSVVRALRAIDRCDVVLMVIDATEGVAEQDKKIVGYAHEKGKAIVLTVN 293
Query: 302 KWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD I + + + K I+++L+FL +A +ISA+ + +E++++ D + +
Sbjct: 294 KWDLIEKDDKTMNKFDKKIREELSFLDYAPTLYISALTKQRLPKVLETVDYAVDEASKRV 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T+ + + A + PP K + K+ YA QGG PP ++ N + + Y+RYLE
Sbjct: 354 ATADLNNLIREATQTTPPPGDKHKKLKIFYATQGGVKPPTFILFVNEPELMHFSYRRYLE 413
>gi|335048450|ref|ZP_08541470.1| ribosome biogenesis GTPase Der [Parvimonas sp. oral taxon 110 str.
F0139]
gi|333758250|gb|EGL35808.1| ribosome biogenesis GTPase Der [Parvimonas sp. oral taxon 110 str.
F0139]
Length = 441
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/421 (39%), Positives = 259/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+P++ +VGRPNVGKSTLFN+L N R A+ + PG+TRDR Y + K FI+ DTGG E
Sbjct: 3 RPLVCVVGRPNVGKSTLFNKLINKRIAITEDTPGVTRDRLYQDAEWQNKHFILCDTGGLE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P I+ ++ Q A+ +D+I+F+VDG+ GL+++D+ I+N+LR++ +P+VL +NK
Sbjct: 63 PNSDDIILQKIKAQADVAMENADVILFVVDGKSGLMDEDREISNYLRRTKKPVVLAVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ + +FYELG N +IISA G G+ + L+ I+ E P K+ +++
Sbjct: 123 DTHKMPAEVYEFYELGFENLNIISATQGFGLGDLLDEIIK-EFPENKYTGEED------- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E K+A++GKPNVGKS+L+N +LGE R+I D GTTRDSI S E + K YI DTAG+
Sbjct: 175 EVTKIALIGKPNVGKSSLMNRILGEERMIVSDIAGTTRDSIDSRVEIDGKTYIFTDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ E +E++SV++TL ++ +++ ILL+DA + ++ QD + F E +SLI+ V
Sbjct: 235 RRKKNITENLERYSVVRTLNAVERSDIAILLIDATEGVTEQDTKVIGFAKEQNKSLIIAV 294
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I+ + + K +++I+ KL+F+ +A FIS I+ E+I ++
Sbjct: 295 NKWDLIVKDNKTYKAFEDDIRTKLSFVPYAQLVFISVKTGQRIDKLFEAIKIADENYSTR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + A+ ++ P K R K+ YA Q PP VI N+++ + Y RYL
Sbjct: 355 ISTGILNDIINDAVVHNSPPTDKGQRLKIFYASQVSVRPPKFVIFVNKVELMHFSYLRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|302670901|ref|YP_003830861.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
gi|302395374|gb|ADL34279.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
Length = 442
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 256/422 (60%), Gaps = 16/422 (3%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
++ +VGRPNVGKSTLFN L SR A+V + PG+TRDR Y + SF +IDTGG EP+
Sbjct: 6 IVAVVGRPNVGKSTLFNALAGSRIAIVQDTPGVTRDRIYQDVEWLNHSFTLIDTGGIEPD 65
Query: 64 VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSEN 123
K I+ +M Q + AI +D+IIF+VD +QGL + D + + LRKSG+PIVL +NK +N
Sbjct: 66 SKDIILAQMRDQAQIAIDTADVIIFMVDVKQGLTDSDSKVADMLRKSGKPIVLCVNKVDN 125
Query: 124 INSSISLD---FYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
N S+D FY LGIG P ISA+ GI + LE +++ F K T+
Sbjct: 126 YNRD-SMDVYEFYNLGIGEPFPISAVNKQGIGDLLEEVVS-------HFSKSS-TDEEED 176
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ +K+AI+GKPNVGKS++IN L+GENR+I D GTTRD+I + +YN KKY IDTAG+
Sbjct: 177 DSVKIAIIGKPNVGKSSIINKLIGENRLIVSDIAGTTRDAIDTPVKYNGKKYTFIDTAGL 236
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+NK + +E + +++T+ ++ A+V IL+++A+ ++ QD IA +ESG+++I+ V
Sbjct: 237 RRKNKIKDELEHYMIVRTVGAVERADVAILVINAEDGVTEQDAKIAGIAHESGKAVIIAV 296
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I + + +I+ L F+++A FISA + + I+ V ++ +
Sbjct: 297 NKWDLIEKDNHSVKEFTKDIRNTLAFMNYAEIIFISAETGQRLVKLYDMIDMVSENHALR 356
Query: 359 LSTSRITRALISA-IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST + + A + PP K I KL Y Q PP VI N K + Y RY
Sbjct: 357 VSTGVLNEIMTQAVVMQQPPSDKGKIL-KLYYITQASVKPPTFVIFVNDKKLMHFSYTRY 415
Query: 418 LE 419
+E
Sbjct: 416 IE 417
>gi|291563224|emb|CBL42040.1| ribosome-associated GTPase EngA [butyrate-producing bacterium
SS3/4]
Length = 441
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 261/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L S ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVLAGSTISIVKDTPGVTRDRIYADCTWLNNNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ K I+ +M +Q + AI +D+IIFIVD RQGLV+ D + + LRKS +P+VL +NK
Sbjct: 63 PDSKDIILAQMREQAQIAIDTADVIIFIVDVRQGLVDADSKVADMLRKSKKPVVLAVNKV 122
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+++ + +FY LGIG+P +SA G+ L+ ++ K+F++ ++ +
Sbjct: 123 DSMAKFGNDVYEFYNLGIGDPVPVSAASRLGLGELLDEVV-------KYFREDQYDDSED 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AIVGKPNVGKS++IN LLGENRVI + GTTRD++ + N +YI IDTAG
Sbjct: 176 -DRPRIAIVGKPNVGKSSIINKLLGENRVIVSNIAGTTRDAVDTEIVRNGTEYIFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E IE++S+I+T+ ++ A+VV++++DA + I+ QD IA ++ G+ +IV
Sbjct: 235 LRRKSKIKEDIERYSIIRTVTAVERADVVLMVIDAVEGITEQDAKIAGIAHDRGKGVIVV 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I + +K+ L+++ +A + F+SA+ + E I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTIYEYTRKLKETLSYMPYAEYIFVSALTGQRMEKLFELIDMVRENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R K+ Y Q PP VI N + + Y RY
Sbjct: 355 RVATGVLNEIVTEAVAMQQPPSDKGKRLKIYYVTQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|269837313|ref|YP_003319541.1| small GTP-binding protein [Sphaerobacter thermophilus DSM 20745]
gi|269786576|gb|ACZ38719.1| small GTP-binding protein [Sphaerobacter thermophilus DSM 20745]
Length = 445
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/427 (37%), Positives = 253/427 (59%), Gaps = 18/427 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF- 60
+P++ +VGRPN GKSTLFNRL R A+V + PG TRDR Y E G +F ++DTGG
Sbjct: 3 RPLVAIVGRPNTGKSTLFNRLVGERRAIVEDLPGTTRDRIYAEASWGGVTFDVVDTGGLL 62
Query: 61 -EPEVKKGIMHEMTKQTKQ----AIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIV 115
E E+++ E+ + T++ AI ++D+I+F+VDG+ G+ D + + +R++ +P++
Sbjct: 63 SEQEIERASAAEIAQATQEQAELAIEQADVIVFMVDGQAGVTAGDHEVADLIRRAKRPVL 122
Query: 116 LVINKSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEF 174
L +NK+E N +++FYELG+G+P+ ISAL+G G+ + L+ I+ LP E
Sbjct: 123 LAVNKAEARNIQDAAVEFYELGLGDPYPISALHGTGVGDLLDAIIA-HLP--------ET 173
Query: 175 TNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYIL 234
T E +AIVG+PNVGKS L+N+LLG++R I PGTTRD++ + + + +L
Sbjct: 174 TEAEREEVPSIAIVGRPNVGKSALLNALLGQSRQIVSSIPGTTRDAVDTEITWAGNRVVL 233
Query: 235 IDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGR 294
+DTAGIRR + IEK+SV+++ +++ A+V +L++DA + +AQD IA I E+ +
Sbjct: 234 VDTAGIRRPGRIERGIEKYSVLRSTRAVERADVAVLVIDATEPFTAQDQAIAGAIAEAKK 293
Query: 295 SLIVCVNKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVY 352
+IV VNKWD + + R K ++ +F+S+A FISA+ +N ME ++
Sbjct: 294 GIIVAVNKWDLVEKDHRTMKEFTEKAREAFHFISYAPIVFISALTGQRVNQVMELALAIF 353
Query: 353 DSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGN 412
+ T + R + A+ HPP K K+ Y Q NPP V N + +
Sbjct: 354 AERQRRIPTGELNRVIRDAVYRHPPPTKPNKWLKIYYVTQADVNPPTFVFFVNAPQNVHF 413
Query: 413 DYKRYLE 419
YKRYLE
Sbjct: 414 SYKRYLE 420
>gi|225570488|ref|ZP_03779513.1| hypothetical protein CLOHYLEM_06589 [Clostridium hylemonae DSM
15053]
gi|225160685|gb|EEG73304.1| hypothetical protein CLOHYLEM_06589 [Clostridium hylemonae DSM
15053]
Length = 442
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 256/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y E K F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYAEVSWLDKEFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE K I+ +M +Q + AI +D+I+FI D RQGLV+ D + + LR+SG+P+VLV+NK
Sbjct: 63 PESKDVILSQMREQAQIAIDTADVIVFITDVRQGLVDSDSKVADMLRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + + +FY LGIG+P +SA GI + LE + +FF +
Sbjct: 123 DSFDKFMPDVYEFYNLGIGDPVPVSAASRLGIGDMLERV-------AQFFPEHSSEEEDD 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVGKPNVGKS+++N LLGE RVI D GTTRD+I + + ++Y+ IDTAG
Sbjct: 176 ERP-RIAIVGKPNVGKSSIVNKLLGEQRVIVSDVAGTTRDAIDTEIIHGGREYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKSKIKEELERYSIIRTVTAVERADVVLVVIDAAEGVTEQDAKIAGIAHERGKGIIIV 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + + ++ +++ L+F+ +A ++SA +N + I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTMREYEHRVRQVLSFMPYAEIMYVSAETGQRLNKLYDMIDMVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RVATGVLNEIMTEAVAMQQPPSDKGKRLKLYYITQVSVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|240146998|ref|ZP_04745599.1| ribosome-associated GTPase EngA [Roseburia intestinalis L1-82]
gi|257200843|gb|EEU99127.1| ribosome-associated GTPase EngA [Roseburia intestinalis L1-82]
gi|291535193|emb|CBL08305.1| ribosome-associated GTPase EngA [Roseburia intestinalis M50/1]
gi|291539724|emb|CBL12835.1| ribosome-associated GTPase EngA [Roseburia intestinalis XB6B4]
Length = 441
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/424 (40%), Positives = 258/424 (60%), Gaps = 16/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L R ++V + PG+TRDR Y + F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVLAGERISIVKDTPGVTRDRIYADVTWLDYHFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ K I+ +M +Q + AI +D+IIF+ D RQGL + D + + LR+SG+P+VLV+NK
Sbjct: 63 PDSKDIILSQMREQAEIAIATADVIIFLTDVRQGLQDSDSKVADMLRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKF--FKKKEFTNI 177
++ + +FY LGIG+P+ ISA G+ + L+ ++ K F + K E +
Sbjct: 123 DSFEKFMPDVYEFYNLGIGDPYPISASSMLGLGDMLDEVV------KNFPEYNKDEAED- 175
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
E KVAI+GKPNVGKS+LIN L E+RVI D GTTRD+I + YN K+Y+ IDT
Sbjct: 176 ---ERPKVAIIGKPNVGKSSLINKLAQEDRVIVSDIAGTTRDAIDTDIRYNGKEYVFIDT 232
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RR+NK E IE++S+I+ + ++ A+V I+++DA + ++ QD IA +E G+ +I
Sbjct: 233 AGLRRKNKIKEEIERYSIIRAVTAVERADVCIIVIDATEGVTEQDAKIAGIAHERGKGII 292
Query: 298 VCVNKWDSIIHNQRKIIKNN--IKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD+I + + I ++ I++ L+F+ +A FISA +N + I+ V +++
Sbjct: 293 IAVNKWDAIEKDDKTIYRHTEKIRQILSFMPYAEILFISAKSGQRLNKLFDMIDLVIENN 352
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ ++T + + A+ P K R K+ Y Q PP VI N + + Y
Sbjct: 353 SMRVATGVLNEIVAEAVAMQQPPSDKGKRLKIYYTTQVAVKPPTFVIFVNDKELMHFSYT 412
Query: 416 RYLE 419
RYLE
Sbjct: 413 RYLE 416
>gi|315651881|ref|ZP_07904884.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum DSM
3986]
gi|315485883|gb|EFU76262.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum DSM
3986]
Length = 443
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 256/422 (60%), Gaps = 11/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ ++GRPNVGKSTLFN + ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPVVAIIGRPNVGKSTLFNAIAGEPISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q + AI +D+I+FI D RQGLV+ D + + LRKS +P+VL +NK
Sbjct: 63 PESSDVILSQMREQAEIAIETADVIVFITDVRQGLVDSDSKVCDMLRKSRKPVVLAVNKV 122
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++I + +FY LGIG+P ISA GI + L+ + FK K +
Sbjct: 123 DSIAKFGNDVYEFYNLGIGDPVAISAASRLGIGDLLDAVAV-------HFKSKGNESEED 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AIVGKPNVGKS++IN L G+NRVI D GTTRD+I ++ N ++YI IDTAG
Sbjct: 176 DDRPRIAIVGKPNVGKSSIINRLTGQNRVIVSDIAGTTRDAIDTVVVNNKQEYIFIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E IE++S+I+T+ ++ A+VVIL++DA + ++ QD IA ++ G+ +IV
Sbjct: 236 LRRKSKVKEDIERYSIIRTVTAVERADVVILVIDASEGVTEQDAKIAGIAHDRGKGIIVA 295
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I N + + + N+IK+ L+F+ +A F FISA+ + E I+ V ++ +
Sbjct: 296 VNKWDLIEKNNKTVYEYTNDIKRVLSFMPYAEFIFISALSGQRLQKLFELIDIVRENQTL 355
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A P K R K+ YA Q PP VI N + + Y+RY
Sbjct: 356 RIQTGVLNEIISEATVMQQPPSDKGKRLKIFYATQVAVKPPTFVIFVNIKQLMHFSYQRY 415
Query: 418 LE 419
LE
Sbjct: 416 LE 417
>gi|158320432|ref|YP_001512939.1| GTP-binding protein EngA [Alkaliphilus oremlandii OhILAs]
gi|166920096|sp|A8MH56.1|DER_ALKOO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|158140631|gb|ABW18943.1| small GTP-binding protein [Alkaliphilus oremlandii OhILAs]
Length = 440
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 264/422 (62%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+P++ +VGRPNVGKSTLFN++ R ++V N PG+TRDR Y E F +IDTGG E
Sbjct: 3 RPIVAVVGRPNVGKSTLFNKIAGERISIVENKPGVTRDRIYAEAEWLNYQFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE ++ I +M +Q + A+ +++IIF+VDGR+GL D+ + LRK+ +P+++ +NK
Sbjct: 63 PESEEIIPAQMRRQAELAMETANVIIFVVDGREGLTSVDRDVAELLRKTKKPVIVTLNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ + S +FYELG+G+P ISA G GI + L+ ++ K F +++ N +
Sbjct: 123 DTRHQSEHFYEFYELGMGDPIEISASLGLGIGDLLDEVV-------KNFNPEDY-NQYDD 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IKVA++GKPNVGKS+LIN +LGE RVI D GTTRD+I + F + +Y+LIDTAGI
Sbjct: 175 DVIKVAMIGKPNVGKSSLINRILGEERVIVSDIAGTTRDAIDTPFTDGDDRYVLIDTAGI 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+++ E IEK+S+++ + ++ +++V +L++DA + ++ QD IA + +E+G+ +++ V
Sbjct: 235 RRKSRITESIEKYSIVRAIAAVEKSDVCLLVIDASEGVTEQDKKIAGYSHENGKGMVIVV 294
Query: 301 NKWDSII---HNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
NKWD I H + IK I+ +L ++S+A F+SA+ +N +E + HV + + +
Sbjct: 295 NKWDIIEKDNHTMNEFIK-EIRNELTYISYAPIVFVSALTGQRMNKILEEVKHVSNQNAM 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + AI + K R K+ YA Q PP ++ N + + Y RY
Sbjct: 354 RIPTGALNEVIGEAILLNQAPSDKGKRLKVFYATQASVKPPTFILFINDKELMHFSYLRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|419718327|ref|ZP_14245650.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum
F0468]
gi|383305498|gb|EIC96860.1| ribosome-associated GTPase EngA [Lachnoanaerobaculum saburreum
F0468]
Length = 443
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 257/422 (60%), Gaps = 11/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ ++GRPNVGKSTLFN + ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPVVAIIGRPNVGKSTLFNAIAGEPISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q + AI +D+I+FI D RQGLV+ D + + LRKS +P+VL +NK
Sbjct: 63 PESSDVILSQMREQAEIAIETADVIVFITDVRQGLVDSDSKVCDMLRKSRKPVVLAVNKV 122
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++I + +FY LGIG+P ISA GI + L+ + FK K +
Sbjct: 123 DSIAKFGNDVYEFYNLGIGDPVAISAASRLGIGDLLDAVAV-------HFKSKGNESEED 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AIVGKPNVGKS++IN L G+NRVI D GTTRD+I ++ N ++Y+ IDTAG
Sbjct: 176 DDRPRIAIVGKPNVGKSSIINRLTGQNRVIVSDIAGTTRDAIDTVVVNNRQEYVFIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E IE++S+I+T+ ++ A+VVIL++DA++ ++ QD IA ++ G+ +IV
Sbjct: 236 LRRKSKVKEDIERYSIIRTVTAVERADVVILVIDAREGVTEQDAKIAGIAHDRGKGIIVA 295
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I N + + + N+IK+ L+F+ +A F FISA+ + E I+ V ++ +
Sbjct: 296 VNKWDLIEKNNKTVYEYTNDIKRVLSFMPYAEFIFISALSGQRLQKLFELIDIVRENQTL 355
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A P K R K+ YA Q PP VI N + + Y+RY
Sbjct: 356 RIQTGVLNEIISEATVMQQPPSDKGKRLKIFYATQVAVKPPTFVIFVNIKQLMHFSYQRY 415
Query: 418 LE 419
LE
Sbjct: 416 LE 417
>gi|160946385|ref|ZP_02093594.1| hypothetical protein PEPMIC_00345 [Parvimonas micra ATCC 33270]
gi|158447501|gb|EDP24496.1| ribosome biogenesis GTPase Der [Parvimonas micra ATCC 33270]
Length = 441
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/421 (38%), Positives = 259/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+P++ +VGRPNVGKSTLFN+L N R A+ + PG+TRDR Y + K FI+ DTGG E
Sbjct: 3 RPLVCVVGRPNVGKSTLFNKLINKRIAITEDTPGVTRDRLYQDAEWQNKHFILCDTGGLE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P I+ ++ Q A+ +D+I+F+VDG+ GL+++D+ I+N+LR++ +P+VL +NK
Sbjct: 63 PNSDDIILQKIKAQADVAMENADVILFVVDGKSGLMDEDREISNYLRRTKKPVVLAVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ + +FYELG N +IISA G G+ + L+ I+ E P K+ +++
Sbjct: 123 DTHKMPAEVYEFYELGFENLNIISATQGFGLGDLLDEIIK-EFPENKYTGEED------- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E K+A++GKPNVGKS+L+N +LGE R+I D GTTRDSI S E + K YI DTAG+
Sbjct: 175 EVTKIALIGKPNVGKSSLMNRILGEERMIVSDIAGTTRDSIDSRVEIDGKTYIFTDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ E +E++SV++TL ++ +++ ILL+DA + ++ QD + F E ++LI+ V
Sbjct: 235 RRKRNITENLERYSVVRTLNAVERSDIAILLIDATEGVTEQDTKVIGFAKEQNKALIIAV 294
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I+ + + K +++I+ KL+F+ +A FIS I+ E+I ++
Sbjct: 295 NKWDLIVKDNKTYKAFEDDIRTKLSFVPYAQLVFISVKTGQRIDKLFEAIKIADENYSTR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + A+ ++ P K R K+ YA Q PP VI N+++ + Y RYL
Sbjct: 355 ISTGILNDIINDAVVHNSPPTDKGQRLKIFYASQVSVRPPKFVIFVNKVELMHFSYLRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|376261789|ref|YP_005148509.1| ribosome-associated GTPase EngA [Clostridium sp. BNL1100]
gi|373945783|gb|AEY66704.1| ribosome-associated GTPase EngA [Clostridium sp. BNL1100]
Length = 441
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/426 (39%), Positives = 253/426 (59%), Gaps = 20/426 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST FN L SR ++V + PG+TRDR Y E F +IDTGG E
Sbjct: 3 KPVVAVVGRPNVGKSTFFNYLAGSRISIVEDTPGVTRDRIYTEIEWRNTKFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P + IM +M +Q + AI +D+IIF+VD + G+ DK + LRKS +P+VL +NK
Sbjct: 63 PYSEDIIMQQMKRQAEIAIETADVIIFMVDAKDGMTATDKEVATMLRKSQKPVVLCVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + +FY LG+G+ IIS+++G G+ + L+ + ++ F + +
Sbjct: 123 DRVGDPPPDVYEFYNLGMGDMQIISSVHGLGMGDLLDAV------FEHFPEDMDAEEDED 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IKVA+VGKPN GKS+LINS+LGENRVI + PGTTRD+I + E + +KY IDTAG
Sbjct: 177 V--IKVAVVGKPNAGKSSLINSILGENRVIVSNIPGTTRDAIDTHVEKDGQKYTFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR+R+K E IEK+S I++ +I A+V ++++DA+ ++ QD IA + ++ G++ I+
Sbjct: 235 IRKRSKINETIEKYSTIRSWTAIERADVCLIMIDAEDGVTEQDTKIAGYAHQQGKASIIV 294
Query: 300 VNKWDSI------IHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
+NKWD I + RK+ + +KL F+++A FISA +N E I V D
Sbjct: 295 INKWDLIEKQTGTLEEYRKV----VHEKLGFMTYAPVLFISAKTGQRVNKIYELIKFVAD 350
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
+ +ST + + A+ P K R K+ Y Q G PP V+ N L+
Sbjct: 351 QAAFRISTGMLNDLINEAVAMVQPPSDKGKRLKIYYMTQAGIKPPSFVVFVNDLELFHYS 410
Query: 414 YKRYLE 419
Y+RYLE
Sbjct: 411 YERYLE 416
>gi|343521005|ref|ZP_08757973.1| ribosome-associated GTPase EngA [Parvimonas sp. oral taxon 393 str.
F0440]
gi|343396211|gb|EGV08748.1| ribosome-associated GTPase EngA [Parvimonas sp. oral taxon 393 str.
F0440]
Length = 441
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/421 (38%), Positives = 260/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+P++ +VGRPNVGKSTLFN+L N R A+ + PG+TRDR Y + K FI+ DTGG E
Sbjct: 3 RPLVCVVGRPNVGKSTLFNKLINKRIAITEDTPGVTRDRLYQDAEWQNKHFILCDTGGLE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P I+ ++ Q A+ +D+I+F+VDGR GL+++D+ I+N+LR++ +PI+L +NK
Sbjct: 63 PNSDDIILQKIKAQADVAMENADVILFVVDGRNGLMDEDREISNYLRRTKKPIILAVNKI 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ + + + +FYELG +IISA G G+ + L+ I+ E P K+ +++
Sbjct: 123 DTHKTPMEVYEFYELGYEKLNIISATQGFGLGDLLDEIIK-EFPENKYTGEED------- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E K+A++GKPNVGKS+L+N +LGE R+I D GTTRDSI S E + K YI DTAG+
Sbjct: 175 EVTKIALIGKPNVGKSSLMNRILGEERMIVSDIAGTTRDSIDSRVEIDGKTYIFTDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ E +E++SV++TL ++ +++ ILL+DA + ++ QD + F E ++LI+ V
Sbjct: 235 RRKKNITENLERYSVVRTLNAVERSDIAILLIDATEGVTEQDTKVIGFAKEQNKALIIAV 294
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I+ + + K +++I+ KL+F+ +A FIS I+ E+I ++
Sbjct: 295 NKWDLIVKDNKTYKAFEDDIRTKLSFVPYAQLVFISVKTGQRIDKLFEAIKIADENYSTR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + A+ ++ P K R K+ YA Q PP VI N+++ + Y RYL
Sbjct: 355 ISTGILNDIINDAVVHNSPPTDKGQRLKIFYASQVSVRPPKFVIFVNKVELMHFSYLRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|251796400|ref|YP_003011131.1| GTP-binding protein EngA [Paenibacillus sp. JDR-2]
gi|247544026|gb|ACT01045.1| small GTP-binding protein [Paenibacillus sp. JDR-2]
Length = 440
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 257/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ R A+V + PG+TRDR Y G K+F I+DTGG E
Sbjct: 3 RPVIAIVGRPNVGKSTIFNRVVGDRLAIVEDKPGVTRDRLYSPGEWNGKAFSIVDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + IM + Q + AI E+D+IIF+ D + G+ D + L +S +P+VL +NK
Sbjct: 63 IDGEDEIMKSVRMQAELAIEEADVIIFMCDAKTGVTHADDEVAQMLFRSHKPVVLAVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+N + +FY LG G P +S +G GI + L+ + +LP + + +
Sbjct: 123 DNLNRMDEIYEFYGLGFGTPIAVSGSHGLGIGDMLDAAIE-KLPELE-------DDGYDD 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+VA++G+PNVGKS+L+N+LLGE RVI + GTTRD+I + FE + +KY+LIDTAG+
Sbjct: 175 DVIRVALIGRPNVGKSSLVNALLGEERVIVSNVAGTTRDAIDTPFERDGQKYVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ LK+I A+VV++L++ ++ I QD +IA + +E+G++ I V
Sbjct: 235 RKRGKVYESTEKYSVMRALKAIERADVVLVLINGEEGIIEQDKHIAGYAHEAGKASIFVV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + NI+ F+++A F+SA ++ + +NHV + +
Sbjct: 295 NKWDVVDKDDKTMQEFTQNIRDHFLFMTYAPIVFLSAKTKQRLHKLLPVVNHVSEQHAMR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ +PP K R K+ Y Q PP IVI N + + Y+RYL
Sbjct: 355 IQTHLLNDVVSDAVAYNPPPTDKGKRLKINYVTQVATKPPTIVIFVNNPEMMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|399053691|ref|ZP_10742490.1| ribosome-associated GTPase EngA [Brevibacillus sp. CF112]
gi|433544583|ref|ZP_20500963.1| GTP-binding protein EngA [Brevibacillus agri BAB-2500]
gi|398048468|gb|EJL40940.1| ribosome-associated GTPase EngA [Brevibacillus sp. CF112]
gi|432184162|gb|ELK41683.1| GTP-binding protein EngA [Brevibacillus agri BAB-2500]
Length = 437
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 259/420 (61%), Gaps = 11/420 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
PV+ +VGRPNVGKST+FNRL R A+V + PG+TRDR YG+G +F +IDTGG E
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLVGERIAIVEDMPGVTRDRLYGKGEWLTHTFHVIDTGGIEF 63
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
I+ +M Q + AI E+++II I D R G+ + D + L ++G+P+VL +NK++
Sbjct: 64 GETDEILTQMRYQAELAIDEANVIIMIADSRTGVTDADVELARMLNRTGKPVVLAVNKAD 123
Query: 123 NINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
N + + DFY LG+G P IS +G G+ + LE ++ P + ++KE +
Sbjct: 124 NPDMRADIYDFYSLGLGEPFPISGSHGLGLGDMLEEVVR-HFPAEDDEERKE-------D 175
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
I+V+I+G+PNVGKS+L N+LLGE RVI D GTTRD+I + FE + + Y+L+DTAG+R
Sbjct: 176 VIRVSIIGRPNVGKSSLTNALLGEERVIVSDVAGTTRDAIDTPFERDGQSYVLVDTAGMR 235
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
+R K +E EK+SV++ ++SI +++VV+++++ ++ I QD IA + +E+GR +I+ VN
Sbjct: 236 KRGKVYETTEKYSVMRAMRSIEDSDVVLVVINGEEGIIEQDKKIAGYAHEAGRGVIIIVN 295
Query: 302 KWDSIIHNQRKIIKNN--IKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD++ + + + + I+++ +L +A ++SA +++ + +N V + + +
Sbjct: 296 KWDAVEKDDKTMRRFTELIREEFKYLDYAPILYVSAKSKQRVHTILPKVNEVAQAHAMRI 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
TS + + A PP + R K+ YA Q PP ++ N + + Y+RY+E
Sbjct: 356 PTSVLNDIVTDATIRTPPPSDRGKRLKINYATQATVKPPTFILFVNDPELMHFSYERYIE 415
>gi|297617642|ref|YP_003702801.1| ribosome-associated GTPase EngA [Syntrophothermus lipocalidus DSM
12680]
gi|297145479|gb|ADI02236.1| ribosome-associated GTPase EngA [Syntrophothermus lipocalidus DSM
12680]
Length = 442
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 259/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+ ++ LVGRPNVGKSTLFNR+ R A+V + PG+TRDR Y + + FI++DTGG
Sbjct: 3 RAIVALVGRPNVGKSTLFNRMAGLRKAIVEDTPGVTRDRIYEQAEWAGREFIVVDTGGIR 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
E + E+ KQ++ AI E+D+I+ +VD R+G+ +D+++ LR++ +P+VL NK
Sbjct: 63 FEEGDILAPEVKKQSELAIEEADVIVMVVDAREGVTPEDEMVAGILRRANKPVVLAANKV 122
Query: 122 ENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
E+ + LDFY LG+G P +SA++G L+ ++ + LP + +K E
Sbjct: 123 EDFKKHLGYLDFYRLGLGEPIPVSAIHGMNTDELLDAVIAL-LPPAEEEEKDELA----- 176
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+++A+VG+PNVGKS+L+N L+GE RVI + PGTTRD+I + F Y +Y+LIDTAGI
Sbjct: 177 --VRIALVGRPNVGKSSLLNRLIGEERVIVSEIPGTTRDAIDTPFRYGGNRYVLIDTAGI 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+++ E E++SV++ L+++ ++VV+++LDA + ++ QD IA F++E+G+S I+ V
Sbjct: 235 RRKSRIKEPTERYSVLRALRAVERSDVVLIILDATERVTEQDKKIAGFVHEAGKSNIIIV 294
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + +R K + I+++L FL+++ +ISA+ + +E ++ V +
Sbjct: 295 NKWDLVKKTERTMKEFDDLIREELKFLAYSPILYISALTGQRVKQVIEVVDFVAEQYWRK 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T+ + + L A+ +PP R + Y Q PP + N + + Y RYL
Sbjct: 355 VPTAELNKVLREAVAVNPPPGGGKKRVNIFYITQIKTGPPSFALFVNHPEELHFSYLRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|452992491|emb|CCQ96022.1| GTPase essential for ribosome 50S subunit assembly [Clostridium
ultunense Esp]
Length = 440
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 263/421 (62%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKSTLFNR+ R A+ + PG+TRDR Y E K F +IDTGG E
Sbjct: 5 RPVVCIVGRPNVGKSTLFNRIVGRRIAITEDNPGVTRDRIYAEAEWLNKYFNLIDTGGLE 64
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE ++ I + +Q + AI +D+I+F+VDG G+ D+ I N LRKSG+ ++LV NK
Sbjct: 65 PESEEIIPINIRQQAEIAIDTADVILFVVDGLDGVTSTDEDIANILRKSGKEVLLVCNKI 124
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++ + + +FYELG+G+P IISA G GI + L+ ++ K F + + T +
Sbjct: 125 DSHKTPDEIFEFYELGMGSPIIISAEQGLGIGDLLDEVI-------KHFPEHKDTE-YDD 176
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E ++VA++GKPNVGKS+LIN++LGE RVI D PGTTRD+I + F Y KY+ IDTAG+
Sbjct: 177 ELVRVAVIGKPNVGKSSLINNILGEERVIVTDIPGTTRDAIDTYFTYGEDKYVFIDTAGL 236
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ +E +E++SV++TL ++ +++ +L++D + +S QD IA + +E+G+ +I+ V
Sbjct: 237 RRKRSIYENVERYSVVRTLTAVDRSDICVLMIDGTEGVSEQDTKIAGYAHENGKGIIIAV 296
Query: 301 NKWDSIIH--NQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + N + +I+ KL F+S+A FISA ++ + + V +++ +
Sbjct: 297 NKWDLMEKETNTHLNFEKDIRNKLGFISYAPIVFISAKTGRRVDKLFQLLKVVDNNNNLR 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + A+ + P K +R K+ Y Q PP +I N+ + + Y+RYL
Sbjct: 357 VSTGVLNDIINEAVLLNQPPSDKGVRLKIYYGTQIAVRPPKFLIFINKRQLMHFSYRRYL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|134299023|ref|YP_001112519.1| GTP-binding protein EngA [Desulfotomaculum reducens MI-1]
gi|172044273|sp|A4J3P1.1|DER_DESRM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|134051723|gb|ABO49694.1| small GTP-binding protein [Desulfotomaculum reducens MI-1]
Length = 439
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 262/420 (62%), Gaps = 11/420 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFNR+ +R A+V + PG+TRDR Y + + F ++DTGG +
Sbjct: 3 KPIVAIVGRPNVGKSTLFNRIVGARIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGLD 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I ++ KQ + AI E+DII+F+VD R+GL D+ + LR++ +P++LV NK
Sbjct: 63 -FAEDIITAQIRKQAELAIYEADIILFVVDAREGLTAIDEEVGRTLRRADKPVILVANKV 121
Query: 122 ENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
E+ + DFY+LG+G+P +SA G + L+ ++ LP + + + +
Sbjct: 122 EHFDKIPYYDFYQLGLGDPVPVSAAEGLNTGDLLDELVK-NLPAQD-------EDPYPPD 173
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
I++A++G+PNVGKS+L+N++LGE RVI + PGTTRD+I S FE N K Y+L+DTAG+R
Sbjct: 174 TIRIAVIGRPNVGKSSLVNTILGEERVIVSNIPGTTRDAIDSSFEKNGKNYVLVDTAGMR 233
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
RR K E++SV++ L+++ +V +++ DA + I+ QD I + +E G+++I+ +N
Sbjct: 234 RRKKIDLPTERYSVVRALRAVDRCDVALMVFDATEGIAEQDKRIVGYAHEKGKAIILIIN 293
Query: 302 KWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD I + + + + I+++L FL + +ISA+ + +E+++ V + + +
Sbjct: 294 KWDLIEKDDKTMNRFEKKIREELAFLDYVPTLYISALTKQRVPKVLETVDFVAEEASKRV 353
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T+ + + A +++PP K R K+ YA QGG PP ++ N + + Y+RYLE
Sbjct: 354 ATADLNNLIREATQHNPPPADKHRRLKIFYATQGGVKPPTFILFVNEPEIMHFSYQRYLE 413
>gi|226324619|ref|ZP_03800137.1| hypothetical protein COPCOM_02403 [Coprococcus comes ATCC 27758]
gi|225207067|gb|EEG89421.1| ribosome biogenesis GTPase Der [Coprococcus comes ATCC 27758]
Length = 442
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 258/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L + A+V + PG+TRDR Y E K F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNALAGEKIAIVKDTPGVTRDRIYAEVNWLDKEFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ + I+ +M +Q + AI +D+I+F+ D +QGLV+ D + + LR+S +P++LV+NK
Sbjct: 63 PDSRDVILSQMREQAQIAIDTADVILFMTDVKQGLVDSDSKVADMLRRSHKPVILVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N N + +FY LGIG+P ISA GI + L+ +L +F +
Sbjct: 123 DNFNKMMPDVYEFYNLGIGDPVPISASERIGIGDMLDKVLA-------YFPEGAGQE-EE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +VAIVGKPNVGKS++IN L+G++RVI D GTTRD+I + +N K+Y+ IDTAG
Sbjct: 175 DDRPRVAIVGKPNVGKSSIINRLIGKDRVIVSDIAGTTRDAIDTEVVHNGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVLVVIDAAEGVTEQDAKIAGIAHERGKGVIIV 294
Query: 300 VNKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + + ++ I+ L+FL +A ++SA+ + + I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTTREYEHQIRMVLSFLPYAEIMYVSALTGQRLPKLFDMIDTVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RVATGVLNEIMTEAVAMQQPPSDKGKRLKLYYITQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|405374854|ref|ZP_11029148.1| GTP-binding protein EngA [Chondromyces apiculatus DSM 436]
gi|397086522|gb|EJJ17625.1| GTP-binding protein EngA [Myxococcus sp. (contaminant ex DSM 436)]
Length = 459
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 158/425 (37%), Positives = 250/425 (58%), Gaps = 12/425 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKSTLFNRL R ALV + PG+TRDRHY + + F IDTGGF
Sbjct: 1 MKPLVAIVGRPNVGKSTLFNRLAGRRLALVQDEPGVTRDRHYADAEWEGRKFTFIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
P + ++ ++ +Q + A+ E D+I+F+ D R GL D+ + NFLRKSG+P+VL NK
Sbjct: 61 VPGDEDQLLQQVREQAQLAVDECDVIVFVTDARAGLTAADEAVANFLRKSGKPVVLAANK 120
Query: 121 SENINS---SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
+ +++ +FY LG+G+ +SA +G G++ + + T +LP K+ + +E
Sbjct: 121 LDTTTGQMLALAGEFYRLGLGDVQALSAEHGLGMQELFDAV-TAKLPPKEEGEDEEAPPD 179
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ I++AI+G+PN GKSTL+N++L E RV+ + GTTRD + S Y +K +L DT
Sbjct: 180 DGL--IRMAIIGRPNAGKSTLVNAILKEKRVVASEVAGTTRDPVDSELTYKGRKIVLTDT 237
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AGIRR+ + +E+FSVI LK++ ++V +LL+DA + QD +A E GR+L+
Sbjct: 238 AGIRRKKSIAQRVEQFSVIAALKAMERSDVAVLLMDATEPAVDQDAKLAGLAEERGRALV 297
Query: 298 VCVNKWDSIIHNQRK--IIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD + +QR+ + ++K L F+ +A F SA+ + + ++ + +
Sbjct: 298 IVVNKWDLVGADQRRQETYRESLKYALKFVGYAPILFTSALTGSKVEKVVDVATELAEQF 357
Query: 356 IIHLSTSRITRALISAIKNHPP--CRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
T ++ R L + N+P R K +R L Y Q PP + N + + +
Sbjct: 358 RFRAPTPQLNRLLEHMVDNNPAPIVRGKPLR--LYYIAQVAAAPPTFALTVNHPEGVPDM 415
Query: 414 YKRYL 418
YKRY+
Sbjct: 416 YKRYI 420
>gi|373115173|ref|ZP_09529350.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670648|gb|EHO35726.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium
7_1_58FAA]
Length = 441
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 252/424 (59%), Gaps = 14/424 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKS LFN+L R ++V + PG+TRDR Y E + F ++DTGG
Sbjct: 1 MKPLIAIVGRPNVGKSMLFNKLVGQRLSIVEDTPGVTRDRLYAEAEWRNRKFDLVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP I+ M +Q + AI + +I+F+ D + GL D+ + N L +S +P+VL +NK
Sbjct: 61 EPSADSQILAFMRQQAEIAIQHATVILFVCDIKTGLTASDQEVANMLLRSQKPVVLAVNK 120
Query: 121 SENI---NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
+ + N I +FY LG+G+P +SA++G+G + L+ + P
Sbjct: 121 MDQVGITNPDI-YEFYNLGLGDPIAVSAVHGHGTGDLLDACMEYFPPED--------EEE 171
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ IKVA++GKPNVGKS+L+N +LGE RVI D GTTRD++ S FE KY+ IDT
Sbjct: 172 EEDDVIKVAVIGKPNVGKSSLVNRILGEQRVIVSDMAGTTRDAVDSYFENQKGKYLFIDT 231
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+++K + IEKFSV++ +I A+V ++L+DA + ++ QD +A +E+G++ I
Sbjct: 232 AGMRKKSKVDDRIEKFSVLRATMAIERADVCLILVDANEGVTEQDTKVAGLAHEAGKACI 291
Query: 298 VCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD+I + + + ++ +I++ L+++++A FISA+ ++ + IN+V D +
Sbjct: 292 IVVNKWDAIEKDDKTMDHMRQDIRRDLSYMTYAPIVFISALTGQRVDRLFDLINYVNDQA 351
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ ++T + L A P K R K+ Y Q G PP V N K Y+
Sbjct: 352 SLRITTGMLNTVLADATARVQPPTDKGRRLKIYYMTQIGIKPPHFVCFCNDAKLFHFSYQ 411
Query: 416 RYLE 419
RYLE
Sbjct: 412 RYLE 415
>gi|254478784|ref|ZP_05092152.1| putative GTPase [Carboxydibrachium pacificum DSM 12653]
gi|214035296|gb|EEB76002.1| putative GTPase [Carboxydibrachium pacificum DSM 12653]
Length = 439
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 258/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+ ++ +VGRPNVGKSTLFNR+ R ++V + PG+TRDR YG + FI++DTGG +
Sbjct: 3 RAMVAIVGRPNVGKSTLFNRILKRRISIVEDIPGVTRDRIYGNAEWLNRKFILVDTGGLD 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ K I ++ Q + AI +D+I+F+VD R+GLV +D+ I N LRK+ + ++LV NK
Sbjct: 63 PDPKDVIFSKVKLQVEAAIEAADLILFVVDAREGLVPEDEEIANMLRKTKKEVILVCNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + DF++LG+G P ISA G GI L+ ++ LP E +
Sbjct: 123 DSFKEMPASFYDFFKLGLGEPIPISASNGLGIGELLDEVIK-RLP--------ENDVEYE 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E IK+A++G+PNVGKS+L+N +LGE RVI D PGTTRD+I + F + + YILIDTAG
Sbjct: 174 EETIKIAVIGRPNVGKSSLVNRILGEERVIVSDIPGTTRDAIDTPFTKDGRNYILIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+++ E IE++SV++ L +I A++ +L++DA + + QD IA + +E+G+ +I+
Sbjct: 234 IRRKSRISESIERYSVLRALAAIERADICLLMIDATEGPTEQDTKIAGYAFENGKGIIIL 293
Query: 300 VNKWDSI--IHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + N K I++KL F+SFA FISA I+ +E+++ V++
Sbjct: 294 VNKWDIVEKDSNTYKEYTEMIREKLAFISFAPILFISAKTGQRIHKVLETVDKVWEEYNK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + L A+ PP K K+ YA Q G PP VI N + + Y R+
Sbjct: 354 RITTGLLNNVLNEAMLMFPPPSSKGRPVKIYYATQVGTKPPTFVIFVNEPELLHFSYVRF 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|410657630|ref|YP_006910001.1| GTP-binding protein EngA [Dehalobacter sp. DCA]
gi|410660665|ref|YP_006913036.1| GTP-binding protein EngA [Dehalobacter sp. CF]
gi|409019985|gb|AFV02016.1| GTP-binding protein EngA [Dehalobacter sp. DCA]
gi|409023021|gb|AFV05051.1| GTP-binding protein EngA [Dehalobacter sp. CF]
Length = 443
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 266/424 (62%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDR-HYGEGYIGKKSFIIIDTGGF 60
KPV+ +VGRPNVGKSTLFNR+ A+V N PG+TRDR +Y ++G+K F +IDTGG
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRIVGGLVAIVENTPGVTRDRLYYDAEWLGRK-FTLIDTGGI 61
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E + + +M +Q + A+ E+D+I+F+VD + G+ D+ I +LRKS +P++LV N
Sbjct: 62 EFKDETTPLSSKMKQQAEIAVDEADVIMFLVDAKSGITPDDQQIARYLRKSSKPVLLVAN 121
Query: 120 KSENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
K E + + +F LG G+P +SA++G + L+ ++++ LP ++
Sbjct: 122 KVEKFTRFEAEAHEFLPLGFGDPIPVSAVHGMNTGDLLDTLVSV-LP-------EDAAAD 173
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ + IK+A++G+PNVGKS+++N LLGE RVI D PGTTRD+I + F Y ++ Y+LIDT
Sbjct: 174 YDPDVIKIAVIGRPNVGKSSIVNILLGEERVIVSDIPGTTRDAIDTPFTYEDRNYVLIDT 233
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AGIRR+ K EV E +SV+++ +++ ++VV+++++A + ++ QD I + +E+G+ LI
Sbjct: 234 AGIRRKKKISEVTENYSVVRSFRAVDRSDVVLMVINAIEGVTDQDKKIVGYAHEAGKGLI 293
Query: 298 VCVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ +NKWD +I +++ I K +I+++L F+ +A F+SA IN M+ + V + +
Sbjct: 294 LVINKWDLVIKDEKTINKYEKDIREELAFVLYAPTQFVSAKTGQRINKIMDLVEFVAEQT 353
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+STS + L + +PP K +R K+ YA Q PP + N + + YK
Sbjct: 354 SRRISTSTLNNLLREWVHLNPPPSDKGVRLKILYATQSSVQPPTFIFFVNDPELVHFSYK 413
Query: 416 RYLE 419
RYLE
Sbjct: 414 RYLE 417
>gi|282848929|ref|ZP_06258319.1| ribosome-associated GTPase EngA [Veillonella parvula ATCC 17745]
gi|282581434|gb|EFB86827.1| ribosome-associated GTPase EngA [Veillonella parvula ATCC 17745]
Length = 444
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 262/424 (61%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + N R ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTGGIE 62
Query: 62 --PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I M Q + AI E+D+I+F+VDG+QG+V D+ + N LR SG+P+VLV+N
Sbjct: 63 FITENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRASGKPVVLVVN 122
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K +++N ++ +FY LG+G+P ISA + + L++ + P TN+
Sbjct: 123 KIDSVNQEPNIYEFYNLGLGDPIGISAKNLMNLGDLLDDTVKHFPPVG--------TNVD 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I VAI+G+PNVGKS+L N+LLG++RVI D GTTRDSI + + + N+K++LIDTA
Sbjct: 175 DEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTYWTHENQKFVLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +E++S++++L+S+ A++V+L+LDAQ ++ QD IA + YE+G+ +++
Sbjct: 235 GMRRKSKIEEAVERYSIVRSLRSVDRADIVVLVLDAQDGVTEQDKKIAGYAYEAGKGVVI 294
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD + + + ++ +I +L FL FA F SA+ I+ + + V +
Sbjct: 295 VVNKWDLVEKDDKTTLRFTEDIYDELGFLQFAPILFASALTKQRIHRLADMLKFVSEQQY 354
Query: 357 IHLSTSRITRALISAIKNHP-PCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ST + + L A +P P R I PK+ Y Q PP ++ N + I Y
Sbjct: 355 RRVSTGTLNQLLQDAQTVNPVPSRNGRI-PKIYYMTQASVKPPTFILFVNEPELIHFSYM 413
Query: 416 RYLE 419
R+LE
Sbjct: 414 RFLE 417
>gi|20808046|ref|NP_623217.1| GTP-binding protein EngA [Thermoanaerobacter tengcongensis MB4]
gi|26006716|sp|Q8R9J1.1|DER_THETN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|20516626|gb|AAM24821.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4]
Length = 439
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 258/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+ ++ +VGRPNVGKSTLFNR+ R ++V + PG+TRDR YG + FI++DTGG +
Sbjct: 3 RAMVAIVGRPNVGKSTLFNRILKRRISIVEDIPGVTRDRIYGNAEWLNRKFILVDTGGLD 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ K I ++ Q + AI +D+I+F+VD R+GLV +D+ I N LRK+ + ++LV NK
Sbjct: 63 PDPKDVIFSKVKLQVEAAIEAADLILFVVDAREGLVPEDEEIANMLRKTKKEVILVCNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + DF++LG+G P ISA G GI L+ ++ LP E +
Sbjct: 123 DSFKEMPASFYDFFKLGLGEPIPISASNGLGIGELLDEVIK-RLP--------ENDVEYE 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E IK+A++G+PNVGKS+L+N +LGE RVI D PGTTRD+I + F + + YILIDTAG
Sbjct: 174 EETIKIAVIGRPNVGKSSLVNRILGEERVIVSDIPGTTRDAIDTPFTKDGRNYILIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+++ E IE++SV++ L +I A++ +L++DA + + QD IA + +E+G+ +I+
Sbjct: 234 IRRKSRISESIERYSVLRALAAIERADICLLMIDATEGPTEQDTKIAGYAFENGKGIIIL 293
Query: 300 VNKWDSI--IHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + N K I++KL F+SFA FISA I+ +E+++ V++
Sbjct: 294 VNKWDIVEKDSNTYKEYTEMIREKLAFISFAPILFISAKTGQRIHKVLETVDKVWEEYNK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + L A+ PP K K+ YA Q G PP VI N + + Y R+
Sbjct: 354 RITTGLLNNVLNEAMLMFPPPSSKGRPIKIYYATQVGTKPPTFVIFVNEPELLHFSYVRF 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|379011828|ref|YP_005269640.1| GTP-binding protein EngA [Acetobacterium woodii DSM 1030]
gi|375302617|gb|AFA48751.1| GTP-binding protein EngA [Acetobacterium woodii DSM 1030]
Length = 439
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 161/421 (38%), Positives = 253/421 (60%), Gaps = 10/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR + F +IDTGG E
Sbjct: 3 KPIVAVVGRPNVGKSTLFNKLVGERIAIVEDTPGVTRDRIIADAEWQNHHFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P K I+ +M Q + AI +D+I+ +VDGR+G+ D + N +RK + ++L +NK
Sbjct: 63 PHTKDDILLQMRVQAEVAIDMADLIVLMVDGREGMTSSDLEVANMIRKHDKDVLLAVNKV 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++ N + + +FY LGIG P ISA G G+ + L+ I+ K+++ ++E +
Sbjct: 123 DSRNLENNAYEFYNLGIGEPLAISAEQGLGLGDLLDEIIN---HVKRYYDEEETDD---- 175
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ +KVA++GKPNVGKSTLIN +LGE R+I D PGTTRD++ + Y+ + Y+LIDTAG+
Sbjct: 176 DRLKVAVIGKPNVGKSTLINKILGEERLIVSDIPGTTRDAVDTSVRYDGEDYVLIDTAGL 235
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ K +E IE++S+++ + ++ + VV++L+D Q ++ QD IA + I+ V
Sbjct: 236 RRKKKIYEDIERYSIVRAIAAVERSQVVLVLIDGSQGVTEQDAKIAGIAHNRSIPSIIIV 295
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++++I+ L+F+ +A FISA + E+I V S
Sbjct: 296 NKWDAVEKDNKTMKKMEDDIRDALSFMDYAPIIFISAKTGQRLGKIFETIEFVKSQSAKR 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
++T ++ AL + P K R KL YA Q NPP V+ N + Y+RYL
Sbjct: 356 ITTGKVNEALAEFVMMKQPPSKHGRRLKLYYASQVAINPPTFVVFVNDTTLVHFSYQRYL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|28210831|ref|NP_781775.1| GTP-binding protein EngA [Clostridium tetani E88]
gi|37999662|sp|Q895X8.1|DER_CLOTE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|28203269|gb|AAO35712.1| GTP-binding protein [Clostridium tetani E88]
Length = 438
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 250/421 (59%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y + +F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVEDTPGVTRDRIYAQAEWLNHNFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + I+ +M +Q + AI +D+I+FIVDG++GL D + LRKS +PIVLV+NK
Sbjct: 63 PESEDIIVAQMRRQAEMAIEMADVIMFIVDGKEGLTPADNEVALMLRKSKKPIVLVVNKI 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ I ++ +FY LGIG P ISA G+ + L+ I+ P K + +
Sbjct: 123 DRIEEEDNMYEFYNLGIGEPTTISASQALGLGDMLDKIVE-NFP-------KGYQDEEED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYI++A VGKPNVGKS+LIN +LGE R I + PGTTRD+I S E + K+ILIDTAG+
Sbjct: 175 EYIRIAFVGKPNVGKSSLINKILGEERNIVSNIPGTTRDAIDSFLERDEDKFILIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR+K + IE++S ++T +I A+V ILL+DA++ IS QD I + +E ++L+V V
Sbjct: 235 RRRSKVKDQIERYSTVRTYAAIDRADVCILLIDAEEGISEQDKKIIGYAHELNKALMVVV 294
Query: 301 NKWDSIIH--NQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I N K ++ +L+F+S+A + FISA + ++ Y +
Sbjct: 295 NKWDLIEKETNTMNRFKKELQSELSFMSYAPYIFISAKTGQRVGKVLDLAKECYTNYSKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + + A+ P + R K+ Y Q P V N + + Y+RYL
Sbjct: 355 ISTGVLNDVISKAVMMKEPPIVAMNRLKIYYVTQVATKAPTFVFFVNDPRTLHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|354558298|ref|ZP_08977554.1| GTP-binding protein engA [Desulfitobacterium metallireducens DSM
15288]
gi|353549023|gb|EHC18467.1| GTP-binding protein engA [Desulfitobacterium metallireducens DSM
15288]
Length = 441
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 261/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEG-YIGKKSFIIIDTGGF 60
KPV+ +VGRPNVGKSTLFNRL A+V + PG+TRDR Y + ++G+K F IIDTGG
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRLAGGLVAIVEDRPGVTRDRLYRDSEWLGRK-FTIIDTGGI 61
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E + I +M KQ + AI E+D+I+ +VD + L D++I LR+S +P+V+ N
Sbjct: 62 EFRNEQTSIPTQMRKQAEIAIEEADVIVLVVDAQLELTPDDEMIAQTLRRSRKPVVVAAN 121
Query: 120 KSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
K E+ ++ + Y LG+G P ISA++G I + L+ +LT F +E +
Sbjct: 122 KIESFANAELSELYRLGLGEPIPISAVHGMNIGDLLDEVLT-------HFPSQEEEE-YD 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IK+A +G+PNVGKS+L+NSLLGE RVI + PGTTRD+I + FE+ K YILIDTAG
Sbjct: 174 PDIIKIAAIGRPNVGKSSLVNSLLGEERVIVSNVPGTTRDAIDTAFEHEGKHYILIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ + E+ E++SV ++L+++ +VV++L++A + ++ QD IA + +E+G+ +I+
Sbjct: 234 MRRKGRIDELTERYSVSRSLRAVDRCDVVLMLIEATEGVTEQDKKIAGYAHEAGKGIILV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + + +N I+++L F+ +A FISA +N +E ++ V + +
Sbjct: 294 VNKWDLVDKDDKTMNRFENEIREELGFMRYAPTLFISAKTGQRVNRLLELVDFVAEQNST 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T+ + + + +PP K R K+ Y Q G PP V N + YKRY
Sbjct: 354 RIATATLNTLVREWVHLNPPATDKGKRLKILYMTQVGVKPPTFVCFVNDADLMHFSYKRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|323486971|ref|ZP_08092286.1| hypothetical protein HMPREF9474_04037 [Clostridium symbiosum
WAL-14163]
gi|323692018|ref|ZP_08106266.1| GTP-binding protein engA [Clostridium symbiosum WAL-14673]
gi|355628115|ref|ZP_09049605.1| GTP-binding protein engA [Clostridium sp. 7_3_54FAA]
gi|323399743|gb|EGA92126.1| hypothetical protein HMPREF9474_04037 [Clostridium symbiosum
WAL-14163]
gi|323503941|gb|EGB19755.1| GTP-binding protein engA [Clostridium symbiosum WAL-14673]
gi|354819922|gb|EHF04355.1| GTP-binding protein engA [Clostridium sp. 7_3_54FAA]
Length = 444
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 253/422 (59%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + K+F +IDTGG E
Sbjct: 5 KPVVAVVGRPNVGKSTLFNVLAGDMISIVKDTPGVTRDRIYADCTWLDKAFTLIDTGGIE 64
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ K I+ +M +Q + AI +D+IIFIVD RQGL + D + + LRKS +P+VL +NK
Sbjct: 65 PDTKDVILAQMREQAEIAIATADVIIFIVDVRQGLTDSDSKVADMLRKSKKPVVLAVNKV 124
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LGIG+P ISA G+ L+ +++ F+
Sbjct: 125 DSFQKFGNDVYEFYNLGIGDPVGISAASRLGLGELLDAVVS-------HFEDGTGEEEED 177
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVGKPNVGKS++IN LLGENRVI D GTTRD++ + +N +Y+ IDTAG
Sbjct: 178 ERP-RIAIVGKPNVGKSSIINKLLGENRVIVSDIAGTTRDAVDTEIIHNGTEYVFIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 237 LRRKSKIKEELERYSIIRTVTAVERADVVLVVIDAVEGVTEQDAKIAGIAHERGKGIIIV 296
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + I + N IK L+F+ +A F FISA IN E I+ V ++ +
Sbjct: 297 VNKWDAIEKTDKTIYEYTNKIKMTLSFIPYAEFIFISAATGQRINKLYEIIDMVRENQTL 356
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 357 RIATGVLNEIMTEAVALQQPPSDKGKRLKLYYITQVSVKPPTFVIFVNDKELMHFSYTRY 416
Query: 418 LE 419
LE
Sbjct: 417 LE 418
>gi|392394322|ref|YP_006430924.1| ribosome-associated GTPase EngA [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390525400|gb|AFM01131.1| ribosome-associated GTPase EngA [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 441
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 263/422 (62%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEG-YIGKKSFIIIDTGGF 60
KPV+ +VGRPNVGKSTLFNRL A+V N PG+TRDR Y + ++G+K F IIDTGG
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRK-FTIIDTGGI 61
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I +M +Q + AI ESD+I+F++D + D +I LR+SG+P++L N
Sbjct: 62 EFVNENTPITSQMRRQAEIAIEESDVIVFVIDAQISPTPDDDMIAQTLRRSGKPVILAAN 121
Query: 120 KSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
K EN + + +FY LG+G P ISA++G I + L+ +++ P +E
Sbjct: 122 KVENFSKTELYEFYNLGLGEPIPISAVHGMNIGDLLDEVIS-HFP-------EEIEEEVD 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++A++G+PNVGKS+L+N+LLGE RVI + PGTTRD+I S FE++ K YI+IDTAG
Sbjct: 174 PDTIRIAVIGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAIDSAFEHDGKHYIIIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ + E+ E++SV ++L+++ ++V+++L+DA + ++ QD IA + +E+G+ +++
Sbjct: 234 MRRKGRIEELTEQYSVSRSLRAVDRSDVILMLIDAGEGVTEQDKKIAGYAHEAGKGIVLV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + + +I+++L F+ +A FISA + +E ++ V + +
Sbjct: 294 VNKWDLIEKDDKTMNRFEKDIREELGFMQYAPTLFISAKTGQRVAKLLELVDFVAEQNST 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T+ + + I +PP K R K+ YA Q G PP V N + + Y+RY
Sbjct: 354 RVVTATLNTLVREWIHLNPPPTDKGRRLKILYATQVGVKPPTFVFFVNDHELMHFSYRRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|365843447|ref|ZP_09384365.1| ribosome biogenesis GTPase Der [Flavonifractor plautii ATCC 29863]
gi|364571372|gb|EHM48960.1| ribosome biogenesis GTPase Der [Flavonifractor plautii ATCC 29863]
Length = 441
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 251/424 (59%), Gaps = 14/424 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKS LFN+L R ++V + PG+TRDR Y E + F ++DTGG
Sbjct: 1 MKPLIAIVGRPNVGKSMLFNKLVGQRLSIVEDTPGVTRDRLYAEAEWRNRKFDLVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP I+ M +Q + AI + +I+F+ D + GL D+ + N L +S +P+VL +NK
Sbjct: 61 EPSADSQILAFMRQQAEIAIQHATVILFVCDIKTGLTASDQEVANMLLRSQKPVVLAVNK 120
Query: 121 SENI---NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
+ + N I +FY LG+G+P +SA++G+G + L+ + P
Sbjct: 121 MDQVGITNPDI-YEFYNLGLGDPIAVSAVHGHGTGDLLDACMEYFPPED--------GEE 171
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ IKVAI+GKPNVGKS+L+N +LGE RVI D GTTRD++ S FE KY+ IDT
Sbjct: 172 EEDDVIKVAIIGKPNVGKSSLVNRILGEQRVIVSDMAGTTRDAVDSYFENQKGKYLFIDT 231
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+++K + IEKFSV++ +I A+V ++L+DA + ++ QD +A +E+G++ I
Sbjct: 232 AGMRKKSKVDDRIEKFSVLRATMAIERADVCLILVDANEGVTEQDTKVAGLAHEAGKACI 291
Query: 298 VCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD+I + + + + +I++ L+++++A FISA+ ++ + IN+V D +
Sbjct: 292 IVVNKWDAIEKDDKTMDHMCQDIRRDLSYMTYAPIVFISALTGQRVDRLFDLINYVNDQA 351
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ ++T + L A P K R K+ Y Q G PP V N K Y+
Sbjct: 352 SLRITTGMLNTVLADATARVQPPTDKGRRLKIYYMTQIGIKPPHFVCFCNDAKLFHFSYQ 411
Query: 416 RYLE 419
RYLE
Sbjct: 412 RYLE 415
>gi|253576396|ref|ZP_04853726.1| ribosome-associated GTPase EngA [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844289|gb|EES72307.1| ribosome-associated GTPase EngA [Paenibacillus sp. oral taxon 786
str. D14]
Length = 442
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 257/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ R A+V + PG+TRDR YG K F IIDTGG E
Sbjct: 5 RPVVAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGITRDRIYGASEWNGKPFSIIDTGGIE 64
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ ++ I+ + Q + AI E+D+I+F+ D + G+ D+ + N L +SG+P+++ +NK
Sbjct: 65 LDDEEPILKSIRMQAELAIEEADVIVFMCDAKAGVTTSDEEVANLLYRSGKPVIVAVNKV 124
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+NI ++ +FY LG G P +S +G GI + L+ I LP E+ +
Sbjct: 125 DNIGRIDNIYEFYNLGFGEPIGVSGSHGTGIGDLLDAIAD-NLPE---LADDEYDD---- 176
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + ++Y+LIDTAG+
Sbjct: 177 DVIRVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQRYVLIDTAGM 236
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +K+I A+VV++L++ ++ I QD +IA + YE+G++ I V
Sbjct: 237 RKRGKVYETTEKYSVMRAMKAIERADVVLVLINGEEGIIEQDKHIAGYAYEAGKASIFVV 296
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + + I+ F+++A F+SA ++ + + HV D
Sbjct: 297 NKWDVVEKDDKTMHQFEQRIRDHFLFMTYAPIVFLSAKTKQRLHKLLPVVQHVADQHAKR 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + AI +PP K R ++ Y Q PP IV+ N + + Y+RYL
Sbjct: 357 VQTHLLNDVVSDAIAINPPPTDKGRRLRINYVTQVAVKPPTIVVFVNDPELMHFSYERYL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|295696375|ref|YP_003589613.1| ribosome-associated GTPase EngA [Kyrpidia tusciae DSM 2912]
gi|295411977|gb|ADG06469.1| ribosome-associated GTPase EngA [Kyrpidia tusciae DSM 2912]
Length = 451
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 254/419 (60%), Gaps = 11/419 (2%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
++ +VGRPNVGKSTLFNR+ R A+V + PG+TRDR Y + F IIDTGG +
Sbjct: 12 LVAIVGRPNVGKSTLFNRIVGGRIAIVEDKPGVTRDRLYALASWNGRGFRIIDTGGLDFG 71
Query: 64 VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSEN 123
I+ + Q + A+ E+D +IF+VDG G+ D+ I LR++G+P+VL +NK +N
Sbjct: 72 GSDAIVKSIRAQVELALEEADAVIFLVDGISGITPADEEIAGRLRRAGKPVVLAVNKLDN 131
Query: 124 INSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY 182
N I+ +F+ LG+G+P ISA +G GI + L+ ++ LP E T +
Sbjct: 132 PNRMIAQYEFFRLGLGDPFPISAEHGLGIGDLLDAVVR-RLP-------PEDTGEPDHDA 183
Query: 183 IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRR 242
I+VA++G+PNVGKS+L+N LLGE RV+ + PGTTRD++ +LFE +ILIDTAG+R+
Sbjct: 184 IRVAVIGRPNVGKSSLVNRLLGEERVLVSEIPGTTRDAVDTLFEREGHSFILIDTAGLRK 243
Query: 243 RNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNK 302
R + +E EK+SV++ L++I ++V +L++D +Q I+ QD +A + ++GR++ V VNK
Sbjct: 244 RGRVWEDTEKYSVLRALRAIDRSDVCLLVIDGKQGIAEQDKRVAGYAVDAGRAVAVVVNK 303
Query: 303 WDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLS 360
WD + + + ++ I+++ F+++A F+SA + ++ + + + + +
Sbjct: 304 WDLVEKDDKTAVRMTEEIRQEFAFMTWAPVVFVSAKTGQRVGRILDLVVQIAEQHAMRMP 363
Query: 361 TSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+ + R + A++ PP K R +L YA Q G PP V N + + Y RYLE
Sbjct: 364 TATVNRVVEDAVQRVPPPSDKGRRLRLYYASQVGVKPPTFVFFVNDPELMHFSYIRYLE 422
>gi|452990286|emb|CCQ98500.1| GTPase essential for ribosome 50S subunit assembly [Clostridium
ultunense Esp]
Length = 440
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 255/421 (60%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FN + R A+V + PG+TRDR YG F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTIFNHIMGERIAIVEDRPGVTRDRIYGTTEWLDYPFHLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ ++ ++ Q + AI E+D+I+FIVDG+ GL D+ I L +SG+P+VLV+NK
Sbjct: 63 VGSEDEMLLQVRTQAELAIDEADVILFIVDGKSGLTSTDEEIAGLLFRSGKPVVLVVNKV 122
Query: 122 ENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++ N ++FY LG G P +S +G G + L+ ++ K F +K +
Sbjct: 123 DHPNQLPGIMEFYRLGFGEPFPVSGAHGTGFGDLLDEVI-------KHFPEKIEEEMDE- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+VA++G+PNVGKS+L+N++LGE RVI + GTTRD++ + F + +KY+LIDTAG+
Sbjct: 175 DTIRVALIGRPNVGKSSLVNAILGEERVIVSEVAGTTRDAVDTPFVHEGQKYLLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ L +I ++V +++L+ +Q I QD IA + +++GR +I+ V
Sbjct: 235 RKRGKVYETTEKYSVLRALAAIERSDVALVVLNGEQGIIEQDKKIAGYAHQAGRGVILLV 294
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + +++ + + I+K+ FL +A F+SA IN + V ++ +
Sbjct: 295 NKWDKVEKDEKTHQEMTKEIRKEFQFLDYAPILFVSAKTKQRINRILPLAKEVAENHAMR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ PP +K R +++Y Q G PP +I N + + Y+RYL
Sbjct: 355 IPTPVLNELIADAVAMTPPPSRKGKRLRVKYVTQAGVKPPTFIIFVNDRELMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|153812950|ref|ZP_01965618.1| hypothetical protein RUMOBE_03357 [Ruminococcus obeum ATCC 29174]
gi|149830897|gb|EDM85987.1| ribosome biogenesis GTPase Der [Ruminococcus obeum ATCC 29174]
Length = 441
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 258/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + KSF +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYADVTWLDKSFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+I+FI D +QGLV+ D + + LR+S +P+VLV+NK
Sbjct: 63 PDSGDIILSQMREQAQIAIDTADVIVFITDVQQGLVDSDAKVADMLRRSQKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+++ + +FY LGIG P ISA GI + L+ I+ K+F + +
Sbjct: 123 DSVQKYMMDVYEFYNLGIGEPVAISAANRTGIGDMLDEII------KEFPEDLDAEEDDD 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I KVA+VGKPNVGKS+LIN LLGE+RVI D GTTRD++ + ++ +++YI IDTAG
Sbjct: 177 IP--KVAVVGKPNVGKSSLINKLLGEDRVIVSDIAGTTRDAVDAKVKWKDREYIFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E IE++SVI+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKGKIKEEIERYSVIRTVTAVERADVVVVVIDATEGVTEQDAKIAGIAHERGKGVIIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ + + I K N I++ L ++ +A FISA + E+I+ V ++ +
Sbjct: 295 VNKWDAVEKDDKTIYKHTNRIREVLAYMPYAELVFISAKSGQRLPKLFETIDAVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + L A+ P + R K+ Y Q G PP VI N + + Y RY
Sbjct: 355 RIQTGVLNEILSEAVAMQQPPSDRGKRLKIFYMTQVGVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
+E
Sbjct: 415 IE 416
>gi|294791776|ref|ZP_06756924.1| ribosome-associated GTPase EngA [Veillonella sp. 6_1_27]
gi|294793637|ref|ZP_06758774.1| ribosome-associated GTPase EngA [Veillonella sp. 3_1_44]
gi|294455207|gb|EFG23579.1| ribosome-associated GTPase EngA [Veillonella sp. 3_1_44]
gi|294457006|gb|EFG25368.1| ribosome-associated GTPase EngA [Veillonella sp. 6_1_27]
Length = 444
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/424 (39%), Positives = 262/424 (61%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + N R ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTGGIE 62
Query: 62 --PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ I M Q + AI E+D+I+F+VDG+QG+V D+ + N LR SG+P+VLV+N
Sbjct: 63 FITDNSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRASGKPVVLVVN 122
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K +++N ++ +FY LG+G+P ISA + + L++ + P TN+
Sbjct: 123 KIDSVNQEPNIYEFYNLGLGDPIGISAKNLMNLGDLLDDTVKHFPPVG--------TNVD 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I VAI+G+PNVGKS+L N+LLG++RVI D GTTRDSI + + + N+K++LIDTA
Sbjct: 175 DEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTYWTHENQKFVLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +E++S++++L+S+ A++V+L+LDAQ ++ QD IA + YE+G+ +++
Sbjct: 235 GMRRKSKIEEAVERYSIVRSLRSVDRADIVVLVLDAQDGVTEQDKKIAGYAYEAGKGVVI 294
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD + + + ++ +I +L FL FA F SA+ I+ + + V +
Sbjct: 295 VVNKWDLVEKDDKTTLRFTEDIYDELGFLQFAPILFASALTKQRIHRLADMLKFVSEQQY 354
Query: 357 IHLSTSRITRALISAIKNHP-PCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ST + + L A +P P R I PK+ Y Q PP ++ N + I Y
Sbjct: 355 RRVSTGTLNQLLQDAQTVNPVPSRNGRI-PKIYYMTQASVKPPTFILFVNEPELIHFSYM 413
Query: 416 RYLE 419
R+LE
Sbjct: 414 RFLE 417
>gi|83590169|ref|YP_430178.1| small GTP-binding protein domain-containing protein [Moorella
thermoacetica ATCC 39073]
gi|123524458|sp|Q2RIV4.1|DER_MOOTA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|83573083|gb|ABC19635.1| Small GTP-binding protein domain [Moorella thermoacetica ATCC
39073]
Length = 438
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 261/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ ++GRPNVGKSTLFNR+T R A+V + PG+TRDR Y + + F ++DTGG
Sbjct: 3 KPIVAIIGRPNVGKSTLFNRITGGRVAIVEDTPGVTRDRLYRDAEWCGRQFTLVDTGGIA 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ + Q +QA+ E+D+IIF+VD R G+ D+ I LR+S +P++LV NK
Sbjct: 63 THQDDPLVARVRSQAEQALKEADVIIFLVDSRTGITADDEEIAALLRRSDRPVILVANKV 122
Query: 122 ENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
E+ + +++ +FY LG+G+P ISA +G + L+ ++ + LP ++ +
Sbjct: 123 EDFSDPTVTHEFYRLGLGDPVPISAAHGLNTGDLLDRVVEL-LPAVPAGEEGD------- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+KVAIVG+PNVGKS+L+N LLGE RVI D PGTTRD++ + ++YILIDTAG+
Sbjct: 175 -ALKVAIVGRPNVGKSSLVNRLLGEERVIVSDLPGTTRDAVDTYIRRGEREYILIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+++ E++SV++ L+++ A+VV+++LD + ++ QD IA + +E G++ I+ V
Sbjct: 234 RRKSRITVPTERYSVLRALRAVERADVVLVILDGTEGVTEQDKKIAGYGHEKGKATIIVV 293
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + ++R + + ++++L+F+++A FISA+ ++ + +I+ V +++
Sbjct: 294 NKWDLVPKDERTMDHYREAVRQELSFMAYAPVLFISALTGQRVDQVLMTIDAVGEAANRR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
++T + + A+ PP K K+ YA Q PP V NR + + Y+RYL
Sbjct: 354 VATGTLNAVVREAVLLTPPPSVKGQEVKIYYATQVKVKPPTFVFFTNRPEGVHFSYQRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|220929546|ref|YP_002506455.1| GTP-binding protein EngA [Clostridium cellulolyticum H10]
gi|254783147|sp|B8I442.1|DER_CLOCE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219999874|gb|ACL76475.1| small GTP-binding protein [Clostridium cellulolyticum H10]
Length = 441
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/426 (39%), Positives = 252/426 (59%), Gaps = 20/426 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST FN L SR ++V + PG+TRDR Y E F +IDTGG E
Sbjct: 3 KPVVAVVGRPNVGKSTFFNYLAGSRISIVEDTPGVTRDRIYTEIEWRNTKFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P + IM +M +Q + AI +D+IIF+VD + G+ DK + LRKS +P+VL +NK
Sbjct: 63 PYSEDIIMQQMKRQAEIAIETADVIIFMVDAKDGMTATDKEVATMLRKSQKPVVLCVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + +FY LG+G IIS+++G GI + L+ + ++ F ++ +
Sbjct: 123 DRVGDPPPDVYEFYNLGMGEMQIISSVHGLGIGDLLDEV------FEHF--PEDIASEEE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IKVA+VGKPN GKS+LINS+LGENRVI + PGTTRD+I + E + +KY IDTAG
Sbjct: 175 EDVIKVAVVGKPNAGKSSLINSILGENRVIVSNIPGTTRDAIDTHVEKDGQKYTFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRRR+K E IEK+S I++ ++ A+V ++++DA+ ++ QD IA + ++ G++ I+
Sbjct: 235 IRRRSKISENIEKYSTIRSWTAVERADVCLIMIDAEDGVTEQDTKIAGYAHQQGKASIIV 294
Query: 300 VNKWDSI------IHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
+NKWD I + RK+ + +KL F+++A FISA + E I V D
Sbjct: 295 INKWDLIEKQTGTLEEYRKV----VHEKLGFMTYAPVLFISAKTGQRVIKIYELIKFVAD 350
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
+ +ST + + A+ P K R K+ Y Q G PP V+ N ++
Sbjct: 351 QAAFRISTGMLNDLVSEAVAMVQPPSDKGKRLKIYYMTQIGVKPPSFVVFVNDVELFHYS 410
Query: 414 YKRYLE 419
Y+RYLE
Sbjct: 411 YERYLE 416
>gi|291550925|emb|CBL27187.1| ribosome-associated GTPase EngA [Ruminococcus torques L2-14]
Length = 442
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 259/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADVDWLDRDFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+IIFI D +QGLV+ D + + LR+SG+P+VLV+NK
Sbjct: 63 PDSSDIILSQMREQAQIAIDTADVIIFITDVKQGLVDSDSKVADMLRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + ++ +FY LGIG+P ISA G+ + L+ + T P + E +
Sbjct: 123 DNFDKYMADVYEFYNLGIGDPVPISAASRLGLGDMLDAV-TAHFPE---WDPSEADD--- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AIVGKPNVGKS++IN LLGENRVI + GTTRD+I + ++ K+YI IDTAG
Sbjct: 176 -DRPRIAIVGKPNVGKSSIINRLLGENRVIVSNIAGTTRDAIDTEIVHDGKEYIFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEELERYSIIRTVSAVERADVVLMVIDATEGVTEQDAKIAGIAHERGKGVIIV 294
Query: 300 VNKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + K + I++ L+++ +A ++SA+ + + I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTMKEYEGKIRQVLSYMPYAEIMYVSALTGQRLPKLYDMIDMVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RIATGVLNEIMTEAVAMQQPPSDKGKRLKLYYITQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|164686350|ref|ZP_02210380.1| hypothetical protein CLOBAR_02788 [Clostridium bartlettii DSM
16795]
gi|164601952|gb|EDQ95417.1| ribosome biogenesis GTPase Der [Clostridium bartlettii DSM 16795]
Length = 450
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/423 (39%), Positives = 258/423 (60%), Gaps = 15/423 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+P++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR + E K F +IDTGG E
Sbjct: 13 RPIVAVVGRPNVGKSTLFNKLAGKRISIVEDTPGVTRDRIFAEVEWLNKYFTLIDTGGIE 72
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I+ +M Q A+ + IIIF+VDG+ GL DK + LRK+ +P++L +NK
Sbjct: 73 KDNGDVILSQMRNQAMLAVDMAHIIIFVVDGKAGLTAADKEVAQILRKTNKPVLLAVNKI 132
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++IN ++ DFYELG+GNP+ IS+ G+ + L+ ++ P K +
Sbjct: 133 DSINQMDNIYDFYELGLGNPYAISSANSMGLGDLLDEVVE-NFP-------KGLNTEYDE 184
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+VAI GKPN GKS+++N++LGENRVI GTTRD+I + FE + ++Y+LIDTAGI
Sbjct: 185 DIIRVAITGKPNAGKSSILNNILGENRVIVSPIAGTTRDAIDTYFEKDGQQYLLIDTAGI 244
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K +E +EKFSVI+++ ++ A+VV++++DA + ++ QD +A ++ G+ I V
Sbjct: 245 RRKSKVYERVEKFSVIRSMSAVERADVVLIVIDATEGVTEQDTKVAGIAHDEGKGCIFIV 304
Query: 301 NKWDSIIHNQRKIIKN---NIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
NKWD +I K + N I++K F+ +A F+SA+ +N +E++++V
Sbjct: 305 NKWD-LIEKDNKTLGNYTKEIREKFPFMMYAPVLFVSALTNQRMNKILETVDYVASEHAK 363
Query: 358 HLSTSRITRALISAIK-NHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+STS + + A+ N PP K R K+ Y Q G PP + N + Y+R
Sbjct: 364 RVSTSALNDVIGEAVMLNQPPSDKGR-RLKIYYGSQTGTKPPKFTLFINDKQLTHFSYQR 422
Query: 417 YLE 419
YLE
Sbjct: 423 YLE 425
>gi|302389542|ref|YP_003825363.1| ribosome-associated GTPase EngA [Thermosediminibacter oceani DSM
16646]
gi|302200170|gb|ADL07740.1| ribosome-associated GTPase EngA [Thermosediminibacter oceani DSM
16646]
Length = 436
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 255/422 (60%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M + +VGRPNVGKSTLFNR+ R ++V + PG+TRDR YG+ K F ++DTGG
Sbjct: 1 MSFTVAIVGRPNVGKSTLFNRIIGKRISIVDDKPGVTRDRIYGQVEWRGKKFTLVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+PE + + +Q + AI SD+I+F++D ++GL+ DK + LRKSG+PI+ VINK
Sbjct: 61 DPEGSDVMTSHIRRQVEFAIDSSDLILFLLDSKEGLLPTDKEVAALLRKSGKPIIPVINK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + L +FY+LG+G P ISA++G+ + + L+ I+ F + E + +
Sbjct: 121 VDDYAAKPELYEFYQLGLGEPVFISAIHGSNVGDLLDQIVG-------FIDEDEGPD-YD 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVA+VGKPNVGKS+L+N++LGE RVI D PGTTRD+I + FEY +K +LIDTAG
Sbjct: 173 EGVIKVAVVGKPNVGKSSLVNAILGEERVIVSDIPGTTRDAIDTPFEYEGQKMVLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+++ E IE +S I+ L ++ A++V+++LDA Q IS QD IA +E+G+++I+
Sbjct: 233 MRRKSRVKEDIEFYSNIRALGAVERADIVLVVLDATQEISEQDKKIAGIAHEAGKAVIIV 292
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + I + NI+K+ F+ +A F+SA +N +E I V D
Sbjct: 293 VNKWDLVEKDDKTIYRYTENIRKEFAFIQYAPIVFVSAKTKKRVNKVLELIRFVMDQYTF 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ + + A P K R K+ Q G PP V+ N + + Y RY
Sbjct: 353 RIEKGVLNELVEDATAMLAPPTIKGRRLKIYSVAQIGVKPPTFVLTVNDTELLHFSYVRY 412
Query: 418 LE 419
LE
Sbjct: 413 LE 414
>gi|226312035|ref|YP_002771929.1| GTP-binding protein EngA [Brevibacillus brevis NBRC 100599]
gi|254783139|sp|C0ZCB6.1|DER_BREBN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|226094983|dbj|BAH43425.1| GTP-binding protein EngA [Brevibacillus brevis NBRC 100599]
Length = 437
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/420 (36%), Positives = 259/420 (61%), Gaps = 11/420 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
PV+ +VGRPNVGKST+FNRL R A+V + PG+TRDR YG+G +F +IDTGG E
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLIGERVAIVEDMPGVTRDRLYGKGEWLTHTFHVIDTGGIEF 63
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
I+ +M Q + AI E+D+II I D R G+ + D ++ L ++G+P+VL +NK++
Sbjct: 64 GETDEILTQMRYQAELAIDEADVIIMIADSRTGVTDADVELSRMLNRTGKPVVLAVNKAD 123
Query: 123 NINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
N + DFY LG+G P +S +G G+ + LE + P + +K++ +
Sbjct: 124 NPEMRADIYDFYSLGLGEPFPVSGSHGLGLGDMLEEVCQ-HFPAEDDEEKRD-------D 175
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
I+V+I+G+PNVGKS+L N++LGE RVI + GTTRD+I + FE +++ Y+L+DTAG+R
Sbjct: 176 VIRVSIIGRPNVGKSSLTNAILGEERVIVSEVAGTTRDAIDTPFERDDQSYVLVDTAGMR 235
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
+R K +E EK+SV++ ++SI +++VV+++++ ++ I QD IA + +E+GR +I+ VN
Sbjct: 236 KRGKVYETTEKYSVMRAMRSIEDSDVVLVVINGEEGIIEQDKKIAGYAHEAGRGVIIIVN 295
Query: 302 KWDSIIHNQRKIIKNN--IKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD+I + + + + I+++ +L +A ++SA +++ + +N V + + +
Sbjct: 296 KWDAIEKDDKTMQRFTELIREEFKYLDYAPILYVSAKSKQRVHTILPKVNEVAQAHSMRI 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
T+ + + A PP + R K+ YA Q PP ++ N + + Y+RY+E
Sbjct: 356 PTAVLNDLVTDATIRTPPPSDRGKRLKINYATQATVKPPTFILFVNDPELMHFSYERYIE 415
>gi|269797893|ref|YP_003311793.1| small GTP-binding protein [Veillonella parvula DSM 2008]
gi|269094522|gb|ACZ24513.1| small GTP-binding protein [Veillonella parvula DSM 2008]
Length = 444
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/424 (39%), Positives = 261/424 (61%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + N R ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTGGIE 62
Query: 62 --PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I M Q + AI E+D+I+F+VDG+QG+V D+ + N LR SG+PIVLV+N
Sbjct: 63 FITENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRASGKPIVLVVN 122
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K +++N ++ +FY LG+G+P ISA + + L++ + P TN+
Sbjct: 123 KIDSVNQEPNIYEFYNLGLGDPIGISAKNLMNLGDLLDDTVKHFPPVG--------TNVD 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I VA++G+PNVGKS+L N+LLG++RVI D GTTRDSI + + + +K++LIDTA
Sbjct: 175 DEDTIHVAVIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTYWTHEGQKFVLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +E++S++++L+S+ A++V+L+LDAQ ++ QD IA + YE+G+ +++
Sbjct: 235 GMRRKSKIEEAVERYSIVRSLRSVDRADIVVLVLDAQDGVTEQDKKIAGYAYEAGKGVVI 294
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD + + + ++ +I +L FL FA F SA+ I+ + + V +
Sbjct: 295 VVNKWDLVKKDDKTTLRFTEDIYDELGFLQFAPILFASALTKQRIHRLADMLKFVSEQQY 354
Query: 357 IHLSTSRITRALISAIKNHP-PCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ST + + L A +P P R I PK+ Y Q PP ++ N + I Y
Sbjct: 355 RRVSTGTLNQLLQDAQTVNPVPSRNGRI-PKIYYMTQASVKPPTFILFVNEPELIHFSYM 413
Query: 416 RYLE 419
R+LE
Sbjct: 414 RFLE 417
>gi|219669400|ref|YP_002459835.1| GTP-binding protein EngA [Desulfitobacterium hafniense DCB-2]
gi|254783150|sp|B8G2P9.1|DER_DESHD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|219539660|gb|ACL21399.1| small GTP-binding protein [Desulfitobacterium hafniense DCB-2]
Length = 441
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 262/422 (62%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEG-YIGKKSFIIIDTGGF 60
KPV+ +VGRPNVGKSTLFNRL A+V N PG+TRDR Y + ++G+K F IIDTGG
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRK-FTIIDTGGI 61
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I +M +Q + AI E+D+I+F++D + D +I LR+SG+P++L N
Sbjct: 62 EFVNENTSISAQMRRQAEIAIEEADVIVFVIDAQISPTPDDDMIAQTLRRSGKPVILAAN 121
Query: 120 KSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
K EN + +FY LG+G P ISA++G I + L+ +++ P ++
Sbjct: 122 KVENFAKTELYEFYNLGLGEPVPISAVHGMNIGDLLDEVVS-HFP-------EDIEEEVD 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++A+VG+PNVGKS+L+N+LLGE RVI + PGTTRD+I S FE+ K YI+IDTAG
Sbjct: 174 PDTIRIAVVGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAIDSAFEHEGKHYIIIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ + E+ E++SV ++L+++ ++V+++LLDA + ++ QD IA + +E+G+ +++
Sbjct: 234 MRRKGRIEELTEQYSVSRSLRAVDRSDVILMLLDAGEGVTEQDKKIAGYAHEAGKGIVLV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + + +I+++L F+ +A FISA + ++ ++ V + +
Sbjct: 294 VNKWDLIEKDDKTMNRFEKDIREELGFMQYAPTLFISAKTGQRVTKLLDLVDFVAEQNST 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T+ + + + +PP K R K+ YA Q G PP V N + + Y+RY
Sbjct: 354 RVATATLNTLVREWVHLNPPPTDKGRRLKVLYATQVGVKPPTFVFFVNDHELMHFSYRRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|150390617|ref|YP_001320666.1| GTP-binding protein EngA [Alkaliphilus metalliredigens QYMF]
gi|166920095|sp|A6TS39.1|DER_ALKMQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|149950479|gb|ABR49007.1| small GTP-binding protein [Alkaliphilus metalliredigens QYMF]
Length = 440
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 260/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN++ R ++V + PG+TRDR Y E F +IDTGG +
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKIIGHRISIVEDQPGVTRDRIYAEVEWLDHYFTLIDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ ++ I +M +Q + AI +D+ +F+VDGR GL D+ + LRKS +P++L +NK
Sbjct: 63 ADTEEIIPAQMREQAQLAIETADVTVFMVDGRAGLTTSDREVAEMLRKSHKPVLLAMNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ N S +FYELGIG+P IS+ G GI + L+ I+ K F + K I+
Sbjct: 123 DTSNRLDSFYEFYELGIGDPIEISSAQGLGIGDLLDEIV------KHFPENKGV--IYDD 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IKVAI+GKPNVGKS+++NS+LGENRVI D GTTRD+I + F +Y+LIDTAG+
Sbjct: 175 DVIKVAIIGKPNVGKSSIVNSILGENRVIVSDIAGTTRDAIDTPFNDGEDQYVLIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IEK+SVI+++ ++ A+V +L++DA + ++ QD +A F +E+G+ I+ V
Sbjct: 235 RRKSKIKENIEKYSVIRSIAAVERADVCLLVIDATEGVTEQDTKVAGFSHENGKGTIIVV 294
Query: 301 NKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I + + K I+ +L +LS+A FISA+ + +E++ + + +
Sbjct: 295 NKWDLIEKDNNTMNKFIKEIRTELAYLSYAPILFISALTRQRMPKVLETVKFISNQRAMR 354
Query: 359 LSTSRITRALISA-IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A + N PP K R K+ Y QG PP V+ N K + Y+RY
Sbjct: 355 VPTGGLNEVIGEATLLNQPPSDKGK-RLKIFYGTQGSIKPPTFVLFINDKKLMHFSYERY 413
Query: 418 LE 419
+E
Sbjct: 414 IE 415
>gi|229829020|ref|ZP_04455089.1| hypothetical protein GCWU000342_01105 [Shuttleworthia satelles DSM
14600]
gi|229792183|gb|EEP28297.1| hypothetical protein GCWU000342_01105 [Shuttleworthia satelles DSM
14600]
Length = 441
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 251/422 (59%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
K V+ +VGRPNVGKSTLFN L R ++V + PG+TRDR Y + F +IDTGG E
Sbjct: 3 KAVVAVVGRPNVGKSTLFNALAGERISIVEDTPGVTRDRIYADVSWLDHEFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+IIF+ D RQGLV+ D + + LR+S +PIVLV+NK
Sbjct: 63 PDSSDIILSQMREQAQIAIDTADVIIFMTDVRQGLVDADAKVADMLRRSKKPIVLVVNKV 122
Query: 122 ENINSSI--SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + + S +FY LGIG+PH ISA G + L+ ++ P +++ T
Sbjct: 123 DDFDKHVMDSYEFYNLGIGDPHPISAAGKLGFGDMLDAVIA-HFPEPDILDREDDTP--- 178
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++A+VGKPNVGKS+LIN L G+ R+I D GTTRD++ + +N K YI +DTAG
Sbjct: 179 ----RIAVVGKPNVGKSSLINRLCGKQRLIVSDIAGTTRDAVDTRVRFNKKDYIFVDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+++ IE++S+++ + ++ +A+VV+L++D + +S QD IA +E G+++I+
Sbjct: 235 LRRKSRIQGDIERYSIVRAVAAVEKADVVVLVIDGAEGVSEQDAKIAGIAHERGKAVIIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ + + + I K L+F+ +A FISA+ + E+I+ V +S +
Sbjct: 295 VNKWDAVEKDNHTMSDQIDRIHKTLSFMLYARIIFISALTGQRLGQLYEAIDQVIAASTM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A+ P K R K+ Y Q PP V+ N K + Y RY
Sbjct: 355 RVGTGVLNEIVAEAVAMQQPPTDKGKRLKIFYVTQVAVKPPTFVVFVNDKKLMHFSYVRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|325289812|ref|YP_004265993.1| GTP-binding protein engA [Syntrophobotulus glycolicus DSM 8271]
gi|324965213|gb|ADY55992.1| GTP-binding protein engA [Syntrophobotulus glycolicus DSM 8271]
Length = 443
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 265/423 (62%), Gaps = 13/423 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKSTLFNR+ A+V N PG+TRDR Y E ++F +IDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTLFNRVVGRMIAIVENTPGVTRDRLYFEAQWLNRNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQ-AIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + + + KQ + A+ E+D+++F++DG+ +D+++ FLR SG+P+VLV+NK
Sbjct: 63 FKDQSTPLSSLMKQQAEIAVEEADVVVFVLDGKTKATVEDEMVAKFLRSSGKPVVLVVNK 122
Query: 121 SENI-NSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
EN N + S ++ ELG G P +SA +G I + L+ ++ LP ++ +
Sbjct: 123 VENFKNYEVESYEYLELGFGEPIPVSAAHGMNIGDMLDKVVE-NLP-------EDDSEDV 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
S + IK+A++G+PNVGKS+L+N ++GE RVI D GTTRD+I + F + ++ Y+LIDTA
Sbjct: 175 SPDVIKIAVIGRPNVGKSSLVNKMVGEERVIVSDIAGTTRDAIDTPFRFEDRDYVLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRRR K E+ E +SVI++ ++I A+VV+++LDA + ++ QD IA + +E+G+++I+
Sbjct: 235 GIRRRKKIAELTENYSVIRSFRAIDRADVVLMMLDAVEGVTDQDKRIAGYAHEAGKAIIL 294
Query: 299 CVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+NKWD I + + I + +I+++L F+++A FISA ++ +E ++ V + +
Sbjct: 295 VINKWDLIEKDDKTINRFERDIREELAFMAYAPTQFISAKTGQRVHKIIELVDFVAEQNC 354
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ TS + L + +PP K R K+ YA Q PP + N + + Y+R
Sbjct: 355 HRILTSTLNNELREWLYLNPPPSDKGKRLKILYATQREVKPPTFIFFVNDPELMHFSYQR 414
Query: 417 YLE 419
YLE
Sbjct: 415 YLE 417
>gi|89894997|ref|YP_518484.1| GTP-binding protein EngA [Desulfitobacterium hafniense Y51]
gi|122482578|sp|Q24VA2.1|DER_DESHY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|89334445|dbj|BAE84040.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 441
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 262/422 (62%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEG-YIGKKSFIIIDTGGF 60
KPV+ +VGRPNVGKSTLFNRL A+V N PG+TRDR Y + ++G+K F IIDTGG
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRK-FTIIDTGGI 61
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I +M +Q + AI E+D+I+F++D + D +I LR+SG+P++L N
Sbjct: 62 EFVNENTPITAQMRRQAEIAIEEADVIVFVIDAQISPTPDDDMIAQTLRRSGKPVILAAN 121
Query: 120 KSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
K EN + +FY LG+G P ISA++G I + L+ +++ P ++
Sbjct: 122 KVENFAKTELYEFYNLGLGEPVPISAVHGMNIGDLLDEVVS-HFP-------EDIEEEVD 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++A+VG+PNVGKS+L+N+LLGE RVI + PGTTRD+I S FE+ K YI+IDTAG
Sbjct: 174 PDTIRIAVVGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAIDSAFEHEGKHYIIIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ + E+ E++SV ++L+++ ++V+++LLDA + ++ QD IA + +E+G+ +++
Sbjct: 234 MRRKGRIEELTEQYSVSRSLRAVDRSDVILMLLDAGEGVTEQDKKIAGYAHEAGKGIVLV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + + +I+++L F+ +A FISA + ++ ++ V + +
Sbjct: 294 VNKWDLIEKDDKTMNRFEKDIREELGFMQYAPTLFISAKTGQRVTKLLDLVDFVAEQNST 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T+ + + + +PP K R K+ YA Q G PP V N + + Y+RY
Sbjct: 354 RVATATLNTLVREWVHLNPPPTDKGRRLKVLYATQVGVKPPTFVFFVNDHELMHFSYRRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|168334058|ref|ZP_02692274.1| small GTP-binding protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 455
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 254/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFNRL ++ +++ + PG+TRDR Y + K F ++DTGG E
Sbjct: 16 KPVVAVVGRPNVGKSTLFNRLAKAKISIIDDTPGVTRDRIYADAEWLNKKFTLVDTGGIE 75
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M KQ + AI +D+IIF+VD + G+V+ D + N +RKS +P+VLV+NK
Sbjct: 76 PDSNDVILSQMRKQAEVAIDTADVIIFLVDVKTGVVDSDMHVANMVRKSQKPVVLVVNKV 135
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+++ +FY LG+G P +SA + + L+ + P +E+ I
Sbjct: 136 DDMAKYHMGIYEFYSLGLGEPIPVSASQPLNLGDMLDEVCA-HFP-------EEYVEIED 187
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IKVAIVGKPNVGKS+L+N +LGE+RVI D GTTR+S+ + + +KY+LIDTAG
Sbjct: 188 EDAIKVAIVGKPNVGKSSLVNKILGEDRVIVSDIAGTTRESVDTEVVIDGQKYVLIDTAG 247
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K E IEK+SVI+T+ +I A++V++L+DA + I+ QD IA +E+G+ I+
Sbjct: 248 VRKRKKVKEDIEKYSVIRTISAIERADIVLILIDANEGITEQDTKIAGMAHEAGKGSIIV 307
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + + + L ++ +A FISA+ +N ++I + + +
Sbjct: 308 VNKWDAIEKNDKTMNQFTKELVNTLAYMKYAPCAFISALTGQRVNKLFDTIKIIAQNQTL 367
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST + LI A+ + P K K+ Y Q PP ++ N + Y+RY
Sbjct: 368 RISTGVLNDVLIEAMGQNQPPSDKGKALKIYYMTQVSIKPPTFILFVNDKNLLHFSYQRY 427
Query: 418 LE 419
+E
Sbjct: 428 IE 429
>gi|402815228|ref|ZP_10864821.1| GTPase Der [Paenibacillus alvei DSM 29]
gi|402507599|gb|EJW18121.1| GTPase Der [Paenibacillus alvei DSM 29]
Length = 440
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 261/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R A+V + PG+TRDR YG G K F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGVTRDRIYGTGEWNGKPFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ ++ + Q + AI E+D+I+F+ + + G+ + D+ + L +SG+PIVL +NK
Sbjct: 63 VYGEDEMLRSIRVQAELAIEEADVIVFMCEAKSGVTQADEEVAQMLFRSGKPIVLAVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N++ + +FY LG G+P IS +G GI + L+ ++ LP +E+
Sbjct: 123 DNMSRMDDIYEFYSLGFGDPVPISGSHGTGIGDLLDEVVN-NLPD---LSDEEYGE---- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IKVA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE ++++++LIDTAG+
Sbjct: 175 DVIKVALIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFEKDDQRFVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++++K+I A+VV+++++ ++ I QD +IA + +E+G++++ V
Sbjct: 235 RKRGKVYETTEKYSVMRSMKAIERADVVLVVINGEEGIIEQDKHIAGYAHEAGKAVLFVV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + + I+ F+++A F+SA ++ + + HV
Sbjct: 295 NKWDVVDKDDKTMHQFETKIRDHFLFMTYAPIVFLSAKTKQRLHKLLPVVQHVAQQHAKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ +PP K R ++ YA Q PP IV+ N + + Y+RYL
Sbjct: 355 IPTHLLNDVVTDAVAYNPPPTDKGRRLRINYATQVAVKPPTIVVFVNDPELMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|325661996|ref|ZP_08150615.1| GTP-binding protein engA [Lachnospiraceae bacterium 4_1_37FAA]
gi|331085846|ref|ZP_08334929.1| GTP-binding protein engA [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325471659|gb|EGC74878.1| GTP-binding protein engA [Lachnospiraceae bacterium 4_1_37FAA]
gi|330406769|gb|EGG86274.1| GTP-binding protein engA [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 442
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 256/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y E + F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYAEVTWLDREFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ K I+ +M +Q + AI +D+IIFI D RQGL + D + + LR+SG+P+VLV+NK
Sbjct: 63 PDSKDIILAQMREQAQIAIDTADVIIFITDVRQGLQDSDSKVADMLRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ +FY LGIG+P ISA G+ + L+ + P +
Sbjct: 123 DSFQKLMADVYEFYNLGIGDPIPISASSRLGLGDMLDAVAA-HFP-------EHSAEEEE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++AIVGKPNVGKS++IN L+GENRVI + GTTRD+I + +N K+Y+ IDTAG
Sbjct: 175 DERPRIAIVGKPNVGKSSIINKLVGENRVIVSNIAGTTRDAIDTEITWNGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVLVVIDAVEGVTEQDAKIAGIAHERGKGVIII 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + + + N+++ L+++ +A ++SA + + I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTMYEYEKNVRQVLSYMPYAEIMYVSAKTGQRLPKLFDMIDMVLENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST + ++ A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RISTGVLNEIMMEAVAMQQPPSDKGKRLKLYYITQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|261406031|ref|YP_003242272.1| GTP-binding protein EngA [Paenibacillus sp. Y412MC10]
gi|329929734|ref|ZP_08283410.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF5]
gi|261282494|gb|ACX64465.1| ribosome-associated GTPase EngA [Paenibacillus sp. Y412MC10]
gi|328935712|gb|EGG32173.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF5]
Length = 440
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 259/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNRL R A+V + PG+TRDR YG K+F +IDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGITRDRIYGSAEWNGKAFSVIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I+ + Q + AI E+D+I+F+ D + G+ + D+ + L +SG+P++L +NK
Sbjct: 63 IDGDDMILKSIRMQAELAIEEADVIVFMCDAKTGVTQSDEEVAQILFRSGKPVILSVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + + +FY LG G+P IS +G GI + L +++ LP + + +
Sbjct: 123 DNLKRADDIYEFYSLGFGDPVGISGSHGTGIGDLL-DVVVENLPELE-------DDEYDE 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + ++Y+LIDTAG+
Sbjct: 175 DVIRVALIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFEKDGQRYVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I A+VV++L++ ++ I QD +IA + YE+G++ + V
Sbjct: 235 RKRGKVYETTEKYSVMRAMRAIERADVVLVLINGEEGIIEQDKHIAGYAYEAGKASLFVV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + + I+ F+++A F+SA + + + HV D +
Sbjct: 295 NKWDMVEKDDKTMQQFEKKIRDHFLFMTYAPVVFLSAKTKQRLQKLLPVVKHVADQHSLR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + AI +PP K R ++ Y+ Q PP +V+ N + + Y+RYL
Sbjct: 355 VQTHLLNDVISDAIAINPPPTDKGRRLRINYSTQVAVKPPTMVVFVNDPELMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|416998755|ref|ZP_11939424.1| ribosome biogenesis GTPase Der [Veillonella parvula
ACS-068-V-Sch12]
gi|333976908|gb|EGL77767.1| ribosome biogenesis GTPase Der [Veillonella parvula
ACS-068-V-Sch12]
Length = 444
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 261/424 (61%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + N R ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTGGIE 62
Query: 62 --PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I M Q + AI E+D+I+F+VDG+QG+V D+ + N LR SG+P+VLV+N
Sbjct: 63 FITENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRASGKPVVLVVN 122
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K +++N ++ +FY LG+G+P ISA + + L++ + P TN+
Sbjct: 123 KIDSVNQEPNIYEFYNLGLGDPIGISAKNLMNLGDLLDDTVKHFPPVG--------TNVD 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I VA++G+PNVGKS+L N+LLG++RVI D GTTRDSI + + + +K++LIDTA
Sbjct: 175 DEDTIHVAVIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTYWTHEGQKFVLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +E++S++++L+S+ A++V+L+LDAQ ++ QD IA + YE+G+ +++
Sbjct: 235 GMRRKSKIEEAVERYSIVRSLRSVDRADIVVLVLDAQDGVTEQDKKIAGYAYEAGKGVVI 294
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD + + + ++ +I +L FL FA F SA+ I+ + + V +
Sbjct: 295 VVNKWDLVEKDDKTTLRFTEDIYDELGFLQFAPILFASALTKQRIHRLADMLKFVSEQQY 354
Query: 357 IHLSTSRITRALISAIKNHP-PCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ST + + L A +P P R I PK+ Y Q PP ++ N + I Y
Sbjct: 355 RRVSTGTLNQLLQDAQTVNPVPSRNGRI-PKIYYMTQASVKPPTFILFVNEPELIHFSYM 413
Query: 416 RYLE 419
R+LE
Sbjct: 414 RFLE 417
>gi|310659189|ref|YP_003936910.1| GTPase involved in ribosome synthesis and maintenance
[[Clostridium] sticklandii]
gi|308825967|emb|CBH22005.1| GTPase involved in ribosome synthesis and maintenance
[[Clostridium] sticklandii]
Length = 438
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 254/422 (60%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M P++ +VGRPNVGKSTLFNR+ R A+V + PG+TRDR Y + K F IIDTGG
Sbjct: 1 MNPIVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRIYAQAEWVSKHFTIIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ ++ I +M +Q + A+ + +I+F+VDG+ GL D+ + L K+ +P++LV+NK
Sbjct: 61 EPDSEELIPKKMRQQAELAMDMAQVILFVVDGKAGLTPSDRDVALMLLKTKKPVLLVVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N N DFYELG G P +S+ G G + L+ ++ K F + T +
Sbjct: 121 VDNKNLPDDFYDFYELGFGEPIPVSSSIGLGTGDLLDEVV-------KNFPQDMDTELDE 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +KVAIVGKPN GKS+++N L+GE RVI GTTRD+I + E + KKY+ IDTAG
Sbjct: 174 -DVVKVAIVGKPNAGKSSILNRLIGEERVIVSPIAGTTRDAIDTYIEMDGKKYLFIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR++K +E IEK+SVI+ S+ +A+VV+ ++DA + IS QD IA +++G++ IV
Sbjct: 233 IRRKSKVYENIEKYSVIRAYASVEKADVVLTVIDATEGISEQDSKIAGLAHDAGKASIVV 292
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + I+++L F+ + F+SA+ + E+++ ++D +
Sbjct: 293 VNKWDLIEKDNHSVKEYTKKIREELPFMQYCPILFVSALTSQRMGKIKETVDFIFDEASK 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ + P K R K+ YA Q G PP I N + Y+RY
Sbjct: 353 RVATGVLNDVIGEAVMMNQPPSDKGKRLKIYYATQVGVRPPTFAIFVNEKELFHFSYQRY 412
Query: 418 LE 419
+E
Sbjct: 413 IE 414
>gi|291522204|emb|CBK80497.1| ribosome-associated GTPase EngA [Coprococcus catus GD/7]
Length = 441
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 256/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ ++GRPNVGKSTLFN L + ++V + PG+TRDR Y + F +IDTGG E
Sbjct: 3 KPIVAIIGRPNVGKSTLFNALAGQQISIVKDTPGVTRDRIYADVNWLNTQFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P I+ M +Q + AI +D+IIF+ D RQG+V+ D + N +R+SG+P+VLV+NK
Sbjct: 63 PSTNDLILKSMREQAEIAIETADVIIFLTDVRQGVVDADFQVANMIRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + ++ +FY LG+G+P IS G+ + L+ ++ K FK +
Sbjct: 123 DNFKTMMADVYEFYNLGLGDPMPISGNSKLGLGDMLDEVI-------KHFKPGTAEE-EA 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E VAIVGKPNVGKS+LIN L GENRVI + GTTRD+I ++ ++N K+Y+ IDTAG
Sbjct: 175 DERPHVAIVGKPNVGKSSLINKLTGENRVIVSNIAGTTRDAIDTVIKHNGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E IE++S+I+T+ ++ ANVV+L++DA++ ++ QD IA +E G+ +I+
Sbjct: 235 LRRKSKIKEDIERYSIIRTVSAVERANVVVLMIDAKEGVTEQDAKIAGIAHERGKGMIIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + + + K ++++KL F+ +A FISA + ++I+ V ++ +
Sbjct: 295 VNKWDAIEKDDKTMNKFTKDVREKLAFMPYAEMLFISAETGQRLPKLFDTIDAVIENHAM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + L A+ P K R +L Y Q PP VI N + Y RY
Sbjct: 355 RVGTGVLNEILSEAVAMKQPPSDKGRRLRLYYITQVSVKPPTFVIFINDKELTHFSYTRY 414
Query: 418 LE 419
+E
Sbjct: 415 IE 416
>gi|315646409|ref|ZP_07899527.1| GTP-binding protein EngA [Paenibacillus vortex V453]
gi|315278052|gb|EFU41372.1| GTP-binding protein EngA [Paenibacillus vortex V453]
Length = 440
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 257/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNRL R A+V + PG+TRDR YG K+F +IDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGITRDRIYGSAEWNGKAFSVIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I+ + Q + AI E+D+I+F+ D + G+ + D+ + L +SG+P++L +NK
Sbjct: 63 IDGDDMILKSIRMQAELAIEEADVIVFMCDAKAGVTQSDEEVAQILFRSGKPVILSVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + +FY LG G+P IS +G GI + L +++ LP + + +
Sbjct: 123 DNLKRVDDIYEFYSLGFGDPVGISGSHGTGIGDLL-DVVVENLPELE-------DDGYDE 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + ++Y+LIDTAG+
Sbjct: 175 DVIRVALIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFEKDGQRYVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I A+VV++L++ ++ I QD +IA + YE+G++ + V
Sbjct: 235 RKRGKVYETTEKYSVMRAMRAIERADVVLVLINGEEGIIEQDKHIAGYAYEAGKASLFVV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + I+ F+++A F+SA + + + HV D +
Sbjct: 295 NKWDMVEKEDKTMQQFEKKIRDHFLFMTYAPIVFLSAKTKQRLQKLLPVVKHVADQHSLR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + AI +PP K R ++ Y+ Q PP +V+ N + + Y+RYL
Sbjct: 355 VQTHLLNDVISDAIAINPPPTDKGRRLRINYSTQVAVKPPTMVVFVNDPELMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|125973539|ref|YP_001037449.1| GTP-binding protein EngA [Clostridium thermocellum ATCC 27405]
gi|256003357|ref|ZP_05428348.1| small GTP-binding protein [Clostridium thermocellum DSM 2360]
gi|281417743|ref|ZP_06248763.1| ribosome-associated GTPase EngA [Clostridium thermocellum JW20]
gi|385778540|ref|YP_005687705.1| ribosome-associated GTPase EngA [Clostridium thermocellum DSM 1313]
gi|419723631|ref|ZP_14250746.1| GTP-binding protein engA [Clostridium thermocellum AD2]
gi|419724544|ref|ZP_14251606.1| GTP-binding protein engA [Clostridium thermocellum YS]
gi|166224331|sp|A3DE77.1|DER_CLOTH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|125713764|gb|ABN52256.1| ribosome-associated GTPase EngA [Clostridium thermocellum ATCC
27405]
gi|255992647|gb|EEU02738.1| small GTP-binding protein [Clostridium thermocellum DSM 2360]
gi|281409145|gb|EFB39403.1| ribosome-associated GTPase EngA [Clostridium thermocellum JW20]
gi|316940220|gb|ADU74254.1| ribosome-associated GTPase EngA [Clostridium thermocellum DSM 1313]
gi|380772091|gb|EIC05949.1| GTP-binding protein engA [Clostridium thermocellum YS]
gi|380780313|gb|EIC09996.1| GTP-binding protein engA [Clostridium thermocellum AD2]
Length = 440
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/424 (40%), Positives = 255/424 (60%), Gaps = 16/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST FN L R ++V + PG+TRDR Y E K F +IDTGG E
Sbjct: 3 KPVVAVVGRPNVGKSTFFNYLVGKRISIVEDTPGVTRDRIYAEVEWRNKKFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P + IM +M +Q + AI +DIIIF+VD + G+ DK + LRK+ +P+++ +NK
Sbjct: 63 PYSEDKIMQQMKRQAEIAIETADIIIFMVDVKDGVTASDKEVATLLRKTKKPVIVAVNKV 122
Query: 122 ENINSSISLDFYE---LGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
+ I + DFYE LG G IS+++G G+ + L+ I K+F +++ +
Sbjct: 123 DKIGE-LPADFYEFYNLGFGELMAISSIHGLGMGDLLDEIF-------KYFPEED-AEDY 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ IKVA+VGKPNVGKS+LIN +LGE RVI D PGTTRD+I + E + K++ IDTA
Sbjct: 174 DEDVIKVAVVGKPNVGKSSLINRILGEERVIVSDIPGTTRDAIDTFVENEHGKFVFIDTA 233
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR++K E IEK+S+I++ +I A+V ++L+DA++ ++ QD IA + +E G++ I+
Sbjct: 234 GIRRQSKINEKIEKYSIIRSWTAIERADVCLILIDAKEGVTEQDTKIAGYAHEQGKASII 293
Query: 299 CVNKWDSIIHNQRKII---KNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
VNKWD +I Q + + + +KL F+ +A FISA+ ++ I HV D +
Sbjct: 294 VVNKWD-LIEKQTGTLEEYRRTVHEKLGFMLYAPVIFISALTGQRVDRIYGLIKHVADQA 352
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ +ST + L A P K R K+ Y Q PP V+ N ++ + Y+
Sbjct: 353 AMRISTGVLNDLLNEATAMVQPPSDKGKRLKIYYMTQSSVKPPSFVLFINNMELMHYSYE 412
Query: 416 RYLE 419
RYLE
Sbjct: 413 RYLE 416
>gi|347532222|ref|YP_004838985.1| GTP-binding protein Der [Roseburia hominis A2-183]
gi|345502370|gb|AEN97053.1| GTP-binding protein Der [Roseburia hominis A2-183]
Length = 441
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 255/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L R ++V + PG+TRDR Y + F +IDTGG E
Sbjct: 3 KPVVAVVGRPNVGKSTLFNALAGERISIVKDTPGVTRDRIYADVNWLDYHFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ + I+ +M +Q + AI +D+IIF+ D RQGL + D + + LR+SG+P+VLV+NK
Sbjct: 63 PDSRDVILSQMREQAEIAIATADVIIFLTDVRQGLQDSDSKVADMLRRSGKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LGIG+P ISA G+ + L+ ++ + + K +E
Sbjct: 123 DSFEKFMPDVYEFYNLGIGDPFPISAASMLGLGDMLDEVVK---HFPDYAKDEE-----E 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E KVAI+GKPNVGKS+LIN L E+RVI D GTTRD+I + Y+ K+Y+ IDTAG
Sbjct: 175 DERPKVAIIGKPNVGKSSLINKLAQEDRVIVSDIAGTTRDAIDTDITYDGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E IE++S+I+ + ++ A+V I+++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEEIERYSIIRAVTAVERADVCIIVIDATEGVTEQDAKIAGIAHERGKGIIIA 294
Query: 300 VNKWDSIIHNQRKIIKNN--IKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + + I ++ I++ L+F+ +A FISA +N E I+ V ++ +
Sbjct: 295 VNKWDAIEKDDKTIYRHTEKIRQILSFMPYAEIIFISAKSGQRLNKIFELIDVVIANNSM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R ++ Y Q PP VI N + + Y RY
Sbjct: 355 RVATGVLNEIVTEAVAMQQPPSDKGKRLRIYYTTQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|355677536|ref|ZP_09060439.1| GTP-binding protein engA [Clostridium citroniae WAL-17108]
gi|354813101|gb|EHE97714.1| GTP-binding protein engA [Clostridium citroniae WAL-17108]
Length = 442
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 252/422 (59%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN + ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVIAGDTISIVKDTPGVTRDRIYADCNWLDMNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ + I+ +M +Q + AI +D+IIFIVD RQGLV+ D + + LRKS +P+VL +NK
Sbjct: 63 PDARDVILSQMREQAEIAISTADVIIFIVDVRQGLVDSDAKVADMLRKSHKPVVLAVNKV 122
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+++ + +FY LGIG+P +SA GI + L+ + K F +
Sbjct: 123 DSVAKFGNDVFEFYNLGIGDPVPVSAASRLGIGDLLDEV-------AKHFDGTQAEE-ED 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++A+VGKPNVGKS++IN LLGENRVI D GTTRD++ + +N Y+ IDTAG
Sbjct: 175 DDRPRIAVVGKPNVGKSSIINKLLGENRVIVSDIAGTTRDAVDTEIIHNGTPYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A++V++++DA + ++ QD IA +E G+ +IV
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADIVVIVIDATEGVTEQDAKIAGIAHERGKGVIVA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + I + N IK L+F+ +A + F+SA + E I+ V + +
Sbjct: 295 VNKWDAIEKTDKTIYEYTNKIKNTLSFMPYAEYIFVSAQTGQRLPKLFELIDAVRQNQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R K+ Y Q PP VI N + + Y RY
Sbjct: 355 RVATGVLNEIMTEAVAMQQPPSDKGKRLKIYYMTQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|118580147|ref|YP_901397.1| GTP-binding protein EngA [Pelobacter propionicus DSM 2379]
gi|171704446|sp|A1APR9.1|DER_PELPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|118502857|gb|ABK99339.1| small GTP-binding protein [Pelobacter propionicus DSM 2379]
Length = 448
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 256/422 (60%), Gaps = 13/422 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ LVGRPNVGKSTLFNRL R A+V + PG+TRDR+Y +K FI+IDTGGF
Sbjct: 1 MKPLVALVGRPNVGKSTLFNRLLGHRRAIVDDTPGVTRDRNYALINRFEKPFILIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP + ++ +M +Q+ A+ E+D+IIF++D R GL D + N LR+ +P++ V+NK
Sbjct: 61 EPVTEDRLLQQMREQSSLAMEEADVIIFMMDARSGLTPADVEVANMLRRVKKPVMYVVNK 120
Query: 121 --SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
E + + S +FY LG+ N + ISA + G+ + ++++L + +E T
Sbjct: 121 VDGEKLEND-SAEFYSLGVENLYTISAEHNRGVYDLMDDLLELLPLDSGPESGEEIT--- 176
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
++A+VG+PNVGKS+L+N LLG RV+ T GTTRDS+ +LF N K Y+LIDTA
Sbjct: 177 -----RIAVVGRPNVGKSSLVNRLLGFERVVANPTAGTTRDSVDTLFMCNKKPYLLIDTA 231
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR+ KT E +EK+SV+ L+SI A+VV+++LDA Q ++ QD IA +++E+GR+ +
Sbjct: 232 GIRRKGKTTEKLEKYSVVDALRSIERADVVLVVLDATQGVTEQDERIAGYVHEAGRACVF 291
Query: 299 CVNKWDSIIHNQRK--IIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+NKWD+I + + + ++ +L++A F+SA+ MES++ V +
Sbjct: 292 VLNKWDAIEKDNSTFGLYVDKVRTGFKYLAYAPIVFVSAMTGQRTAKVMESVDEVMEQFS 351
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++TS + R A +H R K +A Q PP V+ N+ I Y+R
Sbjct: 352 RRVTTSDLNRVFSEATSSHHAPLAHGRRVKFYFATQVTTRPPCFVVFTNQPDSIHFSYER 411
Query: 417 YL 418
YL
Sbjct: 412 YL 413
>gi|423073655|ref|ZP_17062394.1| ribosome biogenesis GTPase Der [Desulfitobacterium hafniense DP7]
gi|361855496|gb|EHL07464.1| ribosome biogenesis GTPase Der [Desulfitobacterium hafniense DP7]
Length = 444
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 262/422 (62%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEG-YIGKKSFIIIDTGGF 60
KPV+ +VGRPNVGKSTLFNRL A+V N PG+TRDR Y + ++G+K F IIDTGG
Sbjct: 6 KPVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDSEWLGRK-FTIIDTGGI 64
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I +M +Q + AI E+D+I+F++D + D +I LR+SG+P++L N
Sbjct: 65 EFVNENTPISAQMRRQAEIAIEEADVIVFVIDAQISPTPDDDMIAQTLRRSGKPVILAAN 124
Query: 120 KSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
K EN + +FY LG+G P ISA++G I + L+ +++ P ++
Sbjct: 125 KVENFAKTELYEFYNLGLGEPVPISAVHGMNIGDLLDEVVS-HFP-------EDIEEEVD 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++A+VG+PNVGKS+L+N+LLGE RVI + PGTTRD+I S FE+ K YI+IDTAG
Sbjct: 177 PDTIRIAVVGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAIDSAFEHEGKHYIIIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ + E+ E++SV ++L+++ ++V+++LLDA + ++ QD IA + +E+G+ +++
Sbjct: 237 MRRKGRIEELTEQYSVSRSLRAVDRSDVILMLLDAGEGVTEQDKKIAGYAHEAGKGIVLV 296
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + + +I+++L F+ +A FISA + ++ ++ V + +
Sbjct: 297 VNKWDLIEKDDKTMNRFEKDIREELGFMQYAPTLFISAKTGQRVTKLLDLVDFVAEQNST 356
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T+ + + + +PP K R K+ YA Q G PP V N + + Y+RY
Sbjct: 357 RVATATLNTLVREWVHLNPPPTDKGRRLKVLYATQVGVKPPTFVFFVNDHELMHFSYRRY 416
Query: 418 LE 419
LE
Sbjct: 417 LE 418
>gi|238924644|ref|YP_002938160.1| GTP-binding protein EngA [Eubacterium rectale ATCC 33656]
gi|259645876|sp|C4ZD63.1|DER_EUBR3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|238876319|gb|ACR76026.1| GTP-binding protein EngA [Eubacterium rectale ATCC 33656]
gi|291525305|emb|CBK90892.1| ribosome-associated GTPase EngA [Eubacterium rectale DSM 17629]
gi|291529236|emb|CBK94822.1| ribosome-associated GTPase EngA [Eubacterium rectale M104/1]
Length = 441
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 256/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKSTLFN L R ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTLFNALAGERISIVKDTPGVTRDRIYADVSWLDYNFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q + AI +D+IIFI D +QGLV+ D + + LR+S +P+VLV+NK
Sbjct: 63 PESGDVILSQMREQAQIAIDTADVIIFITDVKQGLVDSDSKVADMLRRSHKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ +FY LGIG+PH ISA G+ + L+ ++ K F +
Sbjct: 123 DSFEKYMTDVYEFYNLGIGDPHPISAASMLGLGDMLDEVV-------KHFPDSSKQDDED 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +VAIVGKPNVGKS+LIN L E+RVI D GTTRD+I + +Y+ K+YI IDTAG
Sbjct: 176 -DRPRVAIVGKPNVGKSSLINKLAREDRVIVSDIAGTTRDAIDTAIKYDGKEYIFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E IE++S+I+ + ++ A+VVI+++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEDIERYSIIRAVSAVERADVVIVVIDATEGVTEQDAKIAGIAHERGKGIIIA 294
Query: 300 VNKWDSIIHNQRKIIKNN--IKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + + ++ I++ L+F+ +A FISA +N E I+ V +++ +
Sbjct: 295 VNKWDAIEKDNNTVKQHTEKIRQILSFIPYAEILFISAKSGQRLNKIFELIDVVIENNSM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R K+ Y Q PP VI N + Y RY
Sbjct: 355 RVATGVLNEIVTEAVAMQQPPTDKGKRLKIYYVTQVSVKPPTFVIFVNDKNLMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|334134171|ref|ZP_08507684.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF7]
gi|333608299|gb|EGL19600.1| ribosome biogenesis GTPase Der [Paenibacillus sp. HGF7]
Length = 440
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 255/423 (60%), Gaps = 15/423 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+P+L +VGRPNVGKST+FNR+ R A+V + PG+TRDR YG G + F +IDTGG E
Sbjct: 3 RPILAIVGRPNVGKSTIFNRIIGDRLAIVEDKPGVTRDRLYGIGEWLDREFSVIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
E + IM + Q + AI E+D+IIF+VD + G+ D+ + L +S +P+VL +NK
Sbjct: 63 VEGEDQIMKSVRVQAELAIEEADVIIFMVDAKAGVTSADQEVAQLLFRSRKPVVLAVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT--IELPYKKFFKKKEFTNIH 178
+NI + +FY LG G+P IS +G GI + LE + P +++ +
Sbjct: 123 DNIQRQDEIYEFYSLGFGDPIGISGAHGIGIGDMLEAAAAHFPDHPDEEYGE-------- 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
E IKVA++G+PNVGKS+L+N++LGE+RVI D GTTRD+I + FE +++KY++IDTA
Sbjct: 175 --EVIKVALIGRPNVGKSSLVNAILGEDRVIVSDQAGTTRDAIDTPFELDDQKYVIIDTA 232
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+R+R K +E EK+SV++ +K+I A+VV+++++ ++ I QD +IA + +E+G++ I
Sbjct: 233 GMRKRGKVYENTEKYSVMRAMKAIERADVVLVVINGEEGIIEQDKHIAGYAHEAGKAAIF 292
Query: 299 CVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD + + + + I+ F+++A ++SA + + +N V +
Sbjct: 293 VVNKWDVVEKDDKTMHQFTQKIRDHFLFMTYAPVLYVSARTTQRVQKLLPMVNQVAEQHT 352
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ + T + + A+ +PP K R ++ YA Q PP V N + Y+R
Sbjct: 353 MRVQTHVLNDVVSDAVMFNPPPTDKGKRLRINYATQVSVKPPTFVFFVNEPDMMHFSYER 412
Query: 417 YLE 419
YLE
Sbjct: 413 YLE 415
>gi|313893405|ref|ZP_07826977.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442046|gb|EFR60466.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str.
F0412]
Length = 444
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 263/424 (62%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + N R ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTGGIE 62
Query: 62 --PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I M Q + AI E+D+I+F+VDG+QG+V D+ + N LR SG+P+VLV+N
Sbjct: 63 FITENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVGNILRASGKPVVLVVN 122
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K +++N ++ +FY LG+G+P ISA + + L++ + P TN+
Sbjct: 123 KIDSVNQEPNIYEFYNLGLGDPIGISAKNLMNLGDLLDDTVKHFPPVG--------TNVD 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I VAI+G+PNVGKS+L N+LLG++RVI D GTTRDSI + + + ++K++LIDTA
Sbjct: 175 DEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTYWTHGDQKFVLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +E++S++++L+S+ +++V+L+LDAQ ++ QD IA + YE+G+ +++
Sbjct: 235 GMRRKSKIDEAVERYSIVRSLRSVDRSDIVVLVLDAQDGVTEQDKKIAGYAYEAGKGVVI 294
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD + + + ++ +I ++L FL FA F SA+ I+ + + V +
Sbjct: 295 VVNKWDLVEKDDKTTLRFTEDIYEELGFLQFAPILFASALTKQRIHRLADMLKFVSEQQY 354
Query: 357 IHLSTSRITRALISAIKNHP-PCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ST + + L A +P P R I PK+ Y Q PP ++ N + I Y
Sbjct: 355 RRVSTGTLNQLLQDAQTVNPVPSRNGRI-PKIYYMTQASVKPPTFILFVNEPELIHFSYM 413
Query: 416 RYLE 419
R+LE
Sbjct: 414 RFLE 417
>gi|315658242|ref|ZP_07911114.1| ribosome-associated GTPase EngA [Staphylococcus lugdunensis M23590]
gi|385784374|ref|YP_005760547.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|418414048|ref|ZP_12987264.1| GTPase Der [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418636088|ref|ZP_13198441.1| ribosome-associated GTPase EngA [Staphylococcus lugdunensis VCU139]
gi|315496571|gb|EFU84894.1| ribosome-associated GTPase EngA [Staphylococcus lugdunensis M23590]
gi|339894630|emb|CCB53914.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|374841186|gb|EHS04664.1| ribosome-associated GTPase EngA [Staphylococcus lugdunensis VCU139]
gi|410877686|gb|EKS25578.1| GTPase Der [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 436
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 260/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VG+PNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPVVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G P+ IS +G G+ + L+ ++ K F K+ E + +
Sbjct: 122 DNPEMKTDIYDFYALGFGEPYPISGSHGLGLGDLLDEVV------KHFNKETE--DPYDE 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+++I+G+PNVGKS+L+N++LGE RVI + GTTRD+I + + Y+N+ Y+LIDTAG+
Sbjct: 174 DTIRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYTYDNQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA++ I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLIVIDAEEGIIEQDKRVAGYAHEEGKAVVIVV 293
Query: 301 NKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + + K ++I+K FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFTDDIRKNFQFLDYAQIAFVSAKERQRLRTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP VI N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVIFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|255525663|ref|ZP_05392596.1| small GTP-binding protein [Clostridium carboxidivorans P7]
gi|296185422|ref|ZP_06853832.1| ribosome-associated GTPase EngA [Clostridium carboxidivorans P7]
gi|255510649|gb|EET86956.1| small GTP-binding protein [Clostridium carboxidivorans P7]
gi|296050256|gb|EFG89680.1| ribosome-associated GTPase EngA [Clostridium carboxidivorans P7]
Length = 438
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 171/421 (40%), Positives = 249/421 (59%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN++ R ++V + PG+TRDR Y E K +F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKMAGKRISIVQDTPGVTRDRIYAEAEWLKYNFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q A+ +++I+FIVDG+QGL + DK + LRKS +P+VLV+NK
Sbjct: 63 PENSDIIISQMRRQATMAVETANVIVFIVDGKQGLTDADKEVAQMLRKSKKPVVLVVNKI 122
Query: 122 ENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+++ + + +FY LGIG P ISA G+ + L+ +++ +F + +
Sbjct: 123 DSLKDEDNAYEFYNLGIGEPIAISASQALGLGDMLDKVVS-------YFDDDK-LDDEDD 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
EYIK+A VGKPNVGKS+LIN LLGE+RVI + PGTTRD+I S E K+ LIDTAG+
Sbjct: 175 EYIKIAFVGKPNVGKSSLINKLLGEDRVIVSEIPGTTRDAIDSYLETEQGKFTLIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SVI+T +I A+V IL+LDA I+ QD I + +E ++++V V
Sbjct: 235 RRKSKVKEEIERYSVIRTYTAIERADVCILMLDATHGITDQDEKIIGYAHEMSKAIMVIV 294
Query: 301 NKWDSIIH--NQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + N K I L+F+S+A + FISA + ++ + Y +
Sbjct: 295 NKWDLVEKDTNTMNAFKKQIGMNLSFMSYAPYLFISAKTGQRVQKVLDMVKECYSNYSKK 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ P R K+ Y Q G P V N I Y+RY+
Sbjct: 355 IKTGVLNDVISKAVMMKEPPIVGTKRLKIYYVTQIGTKAPTFVFFVNDPSCIHFSYERYI 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|115377683|ref|ZP_01464876.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1]
gi|310821559|ref|YP_003953917.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1]
gi|115365289|gb|EAU64331.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1]
gi|309394631|gb|ADO72090.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1]
Length = 462
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 248/426 (58%), Gaps = 14/426 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKSTLFNRL R ALV + PG+TRDRHY + G ++F +IDTGGF
Sbjct: 1 MKPLVAIVGRPNVGKSTLFNRLAGRRLALVEDEPGVTRDRHYADAQWGDRAFTLIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
P K ++ ++ +Q + A+ E D+I+F+ DGR GL D+ + LRKSG+P+V+ NK
Sbjct: 61 VPGEKDSLLKQVREQAQLAVEECDVILFVTDGRAGLTSADEAVAGLLRKSGKPVVVAANK 120
Query: 121 SENINSS---ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
+N + S +S +F+ +G+G +SA + G+ +E +L LP K+ + E +
Sbjct: 121 LDNASDSMQALSGEFFRMGLGEVMPLSAEHALGVPQLVEAVLD-RLPPKQEGEDAE--AL 177
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
++VAI+G+PNVGKST++N++L E RV+ + PGTTRD I S Y K IL DT
Sbjct: 178 PDDGTLRVAIIGRPNVGKSTMVNAILKEKRVVASEVPGTTRDPIDSALTYKGHKLILTDT 237
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AGIRR+ +E+FSV+ LK + ++V +LL+DA + QD +A + GR+L+
Sbjct: 238 AGIRRKRSIAHRVEQFSVVSALKVMDRSDVAVLLMDATEPAVDQDAKLAGLAEDKGRALV 297
Query: 298 VCVNKWDSIIHNQRK--IIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD I +QR+ + +K L F+ +A F SA+ + + ++ + +
Sbjct: 298 IVVNKWDLIGTDQRRQEAYREALKHSLKFVGYAPIIFTSALTGSKVEKVVDIAVELAEQF 357
Query: 356 IIHLSTSRITRALISAIKNHPP---CRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGN 412
T ++ R L + ++P K L +L Y Q G PP + N + + +
Sbjct: 358 RYRAPTPQLNRLLEHMVDSNPAPIVAGKPL---RLYYIAQVGTAPPTFALTCNYPERVPD 414
Query: 413 DYKRYL 418
YKRY+
Sbjct: 415 MYKRYI 420
>gi|331269697|ref|YP_004396189.1| small GTP-binding protein [Clostridium botulinum BKT015925]
gi|329126247|gb|AEB76192.1| small GTP-binding protein [Clostridium botulinum BKT015925]
Length = 438
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 255/422 (60%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y + F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAQAEWLNNKFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + I+ +M +Q + AI +D+++FIVDG+QGL + D+ + LRK+ + IVL +NK
Sbjct: 63 PESEDVIVAQMRRQAQMAIEMADVVLFIVDGKQGLADADREVAQMLRKANKSIVLAVNKI 122
Query: 122 E--NINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ +I +FY LG+G+P IS+ G G+ + L+ ++ KF E +
Sbjct: 123 DRHQLDDNI-YEFYNLGLGDPMAISSSQGLGLGDLLDEVVD------KFPSVNE--DDEE 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
EYI++A+VG+PNVGKS+LIN +LGE + I + PGTTRDS+ S E K+ LIDTAG
Sbjct: 174 NEYIRIAMVGRPNVGKSSLINRILGEEKHIVSNIPGTTRDSVDSYIEREEGKFALIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E++S ++T+ SI A+V IL+LDA+Q I+ QD I + +E ++++V
Sbjct: 234 LRRKSKIKEQVERYSAVRTIASIENADVCILMLDAEQGIAEQDEKIIGYAHELNKAIMVI 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + K+ ++ +L+FL +A F FISA +N + Y++
Sbjct: 294 VNKWDLIEKDDKTMKNFKDKLRYELSFLPYASFLFISAKTGQRVNKVLGMAKECYNNYCK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + AI P R K+ Y Q G PP + N + + Y+RY
Sbjct: 354 RVKTGILNEVISKAILMKEPPIVGTSRLKVYYVTQIGTKPPTFIFFVNNPELVHFSYRRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|253682586|ref|ZP_04863383.1| ribosome-associated GTPase EngA [Clostridium botulinum D str. 1873]
gi|253562298|gb|EES91750.1| ribosome-associated GTPase EngA [Clostridium botulinum D str. 1873]
Length = 438
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 254/422 (60%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y + F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAQAEWLNNKFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK- 120
PE + I+ +M +Q + AI +D+++FIVDG+QGL + D+ + LRK+ + IVL +NK
Sbjct: 63 PESEDVIVAQMRRQAQMAIEMADVVLFIVDGKQGLADADREVAQMLRKANKSIVLAVNKI 122
Query: 121 -SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ +I +FY LG+G+P ISA G G+ + L+ ++ KF + +
Sbjct: 123 DRRQLDDNI-YEFYNLGLGDPMAISASQGLGLGDLLDEVVD------KF--PETNEDDEE 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
EYI++A+VG+PNVGKS+LIN +LGE + I + PGTTRDS+ S E K+ LIDTAG
Sbjct: 174 NEYIRIAMVGRPNVGKSSLINRILGEEKHIVSNIPGTTRDSVDSYIEREEGKFALIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E++S ++T+ SI A+V IL+LDA+Q I+ QD I + +E +++IV
Sbjct: 234 LRRKSKIKEQVERYSAVRTIASIENADVCILMLDAEQGIAEQDEKIIGYAHELNKAIIVI 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + K+ ++ +L+FL +A F FISA +N + Y++
Sbjct: 294 VNKWDLIEKDDKTMKNFKDKLRYELSFLPYASFLFISAKTGQRVNKVLGMAKECYNNYCK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + AI P R K+ Y Q G PP V N + + Y+RY
Sbjct: 354 RVKTGILNEVISKAILMKEPPVVGTSRLKVYYVTQIGTKPPTFVFFVNNPELVHFSYRRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|238019393|ref|ZP_04599819.1| hypothetical protein VEIDISOL_01257 [Veillonella dispar ATCC 17748]
gi|237864092|gb|EEP65382.1| hypothetical protein VEIDISOL_01257 [Veillonella dispar ATCC 17748]
Length = 444
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 262/424 (61%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + N R ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTGGIE 62
Query: 62 --PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+ I M Q + AI E+D+I+F+VDG+QG+V D+ + N LR SG+P+VLV+N
Sbjct: 63 FITDNSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRASGKPVVLVVN 122
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K +++N ++ +FY LG+G+P ISA + + L++ + P TN+
Sbjct: 123 KIDSVNQEPNIYEFYNLGLGDPIGISAKNLMNLGDLLDDTVKHFPPVG--------TNVD 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I VA++G+PNVGKS+L N+LLG++RVI D GTTRDSI + + + ++K++LIDTA
Sbjct: 175 DEDTIHVAVIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTYWTHGDQKFVLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +E++S++++L+S+ +++V+L+LDAQ ++ QD IA + YE+G+ +I+
Sbjct: 235 GMRRKSKIEEAVERYSIVRSLRSVDRSDIVVLVLDAQDGVTEQDKKIAGYAYEAGKGVII 294
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD I + + ++ +I +L FL FA F SA+ I+ + + V +
Sbjct: 295 VVNKWDLIEKDDKTTLRFTEDIYDELGFLQFAPILFASALTKQRIHRLADMLKFVSEQQY 354
Query: 357 IHLSTSRITRALISAIKNHP-PCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ST + + L A +P P R I PK+ Y Q PP ++ N + I Y
Sbjct: 355 RRVSTGTLNQLLQDAQTVNPVPSRNGRI-PKIYYMTQASVKPPTFILFVNEPELIHFSYM 413
Query: 416 RYLE 419
R+LE
Sbjct: 414 RFLE 417
>gi|225389099|ref|ZP_03758823.1| hypothetical protein CLOSTASPAR_02845 [Clostridium asparagiforme
DSM 15981]
gi|225044833|gb|EEG55079.1| hypothetical protein CLOSTASPAR_02845 [Clostridium asparagiforme
DSM 15981]
Length = 441
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 254/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVLAGETISIVKDTPGVTRDRIYADCSWLNMNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+I+FIVD RQGLV+ D + + LRKS +P+VL +NK
Sbjct: 63 PDTSDVILSQMREQAEIAIATADVIVFIVDVRQGLVDADTKVADMLRKSRKPVVLAVNKV 122
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LGIG+P +SA GI + L+ ++ K+F +
Sbjct: 123 DSYEKFGNDVYEFYNLGIGDPVPVSAASRLGIGDLLDEVV-------KYFDCAKLEE-EE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++A+VGKPNVGKS++IN LLGENRVI D GTTRD++ + ++ Y+ IDTAG
Sbjct: 175 DERPRIAVVGKPNVGKSSIINKLLGENRVIVSDIAGTTRDAVDTEIVHDGTPYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E++S+I+T+ ++ A++V++++DA++ ++ QD IA +E G+ +IV
Sbjct: 235 LRRKSKIHEELERYSIIRTVTAVERADIVVVVIDAKEGVTEQDAKIAGIAHERGKGIIVA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I + N +K+ L+F+ +A + F+SA + E I+ V + +
Sbjct: 295 VNKWDAIEKNDKTIYEYTNKLKEILSFIPYAEYLFVSAATGQRLPKLFEVIDAVRQNQNL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST + + A+ P K R K+ Y Q PP V N + + Y RY
Sbjct: 355 RVSTGVLNEIMAEAVAMQQPPSDKGKRLKIYYMTQVAVKPPTFVAFVNDKELMHFSYVRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|402313581|ref|ZP_10832495.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium ICM7]
gi|400366068|gb|EJP19107.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium ICM7]
Length = 443
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 256/422 (60%), Gaps = 11/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ ++GRPNVGKSTLFN + ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPVVAIIGRPNVGKSTLFNAIAGEPISIVKDTPGVTRDRIYADCTWLNMNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+I+FI D RQGLV+ D + + LRKS +P+VL +NK
Sbjct: 63 PDSSDIILSQMREQAEIAIETADVIVFITDVRQGLVDSDSKVCDMLRKSRKPVVLAVNKV 122
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+++ + +FY LGIG+P +SA GI + LE + FK K+ +
Sbjct: 123 DSMAKFGNDVYEFYNLGIGDPIPVSAASRLGIGDLLEAVAA-------HFKHKDTEDEED 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AIVGKPNVGKS++IN L G+NRVI D GTTRD+I ++ N ++Y+ IDTAG
Sbjct: 176 DDRPRIAIVGKPNVGKSSIINRLTGQNRVIVSDIAGTTRDAIDTVVVNNKQEYVFIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E IE++S+I+T+ ++ A+VVIL++DA + ++ QD IA ++ G+ +IV
Sbjct: 236 LRRKSKVKEDIERYSIIRTVTAVDRADVVILVIDANEGVTEQDAKIAGIAHDKGKGIIVA 295
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + I + NNIK+ L+F+ +A F FISA+ + E I+ V ++ +
Sbjct: 296 VNKWDLVEKDNKTIYEYTNNIKRILSFMPYAEFVFISALSGQRLQKLFEMIDIVRENQTL 355
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A P K R K+ Y Q PP VI N + + Y+RY
Sbjct: 356 RIQTGVLNEIISEATVMQQPPSDKGKRLKIFYTTQVAVKPPTFVIFVNIKQLMHFSYQRY 415
Query: 418 LE 419
LE
Sbjct: 416 LE 417
>gi|302874737|ref|YP_003843370.1| ribosome-associated GTPase EngA [Clostridium cellulovorans 743B]
gi|307690648|ref|ZP_07633094.1| GTP-binding protein EngA [Clostridium cellulovorans 743B]
gi|302577594|gb|ADL51606.1| ribosome-associated GTPase EngA [Clostridium cellulovorans 743B]
Length = 438
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 256/421 (60%), Gaps = 13/421 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y + F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVEDKPGVTRDRIYASSEWVGQEFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q AI +++IIFIVDG+ GL + D+ + LRKS + IVL +NK
Sbjct: 63 PKSDDIILAQMRRQALIAIETANVIIFIVDGKSGLTDTDREVAQMLRKSKKSIVLAVNKV 122
Query: 122 ENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH-S 179
++I + +FY LG+G+P ISA G G+ + L+ ++ K+ +N S
Sbjct: 123 DSIKEEENKFEFYNLGLGDPVAISASQGLGLGDMLDMVVD---------NFKDISNDEAS 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
EYIK+A++GKPNVGKS+LIN LLGE R I + PGTTRD+I S E K++LIDTAG
Sbjct: 174 EEYIKIAMIGKPNVGKSSLINKLLGEERNIVSNIPGTTRDAIDSPLETEIGKFMLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E IE++SVI+TL +I A+V IL+LDA + +S QD I + +E ++++V
Sbjct: 234 LRRKSKVKEEIERYSVIRTLTAIERADVCILMLDATEELSEQDEKIIGYAHELNKAIMVI 293
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + K ++++ KL+F+++A + FISA+ ++ +E YD+
Sbjct: 294 VNKWDLIEKDDKTMKKFTDDLRFKLSFMNYAPYLFISALSGQRVHKVLELAKKCYDNYSK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P R K+ YA Q PP V N + Y+RY
Sbjct: 354 RIATGVLNDVISEAVLRQEPPVTHGKRLKIFYATQVDVKPPTFVFFVNDSSALHYSYERY 413
Query: 418 L 418
L
Sbjct: 414 L 414
>gi|390453458|ref|ZP_10238986.1| GTP-binding protein Der [Paenibacillus peoriae KCTC 3763]
Length = 440
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 157/422 (37%), Positives = 258/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR YG KSF IIDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + I+ + Q + AI E+D+I+F+ D + G+ + D+ + L +SG+PI++ +NK
Sbjct: 63 IDGEDIILKSIRMQAELAIEEADVIVFMSDAKAGITQSDEEVAQMLYRSGKPIIVAVNKV 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+N + + +FY G G+P +S +G GI + L+ I T LP E H
Sbjct: 123 DNLNRADLIYEFYSYGFGDPIPVSGSHGTGIGDLLDAI-TSNLP--------ELEEEHYD 173
Query: 181 E-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + +KY+LIDTAG
Sbjct: 174 EDVIRVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K +E EK+SV++ +++I A+VV+++++ ++ I QD +IA + YE+G++ +
Sbjct: 234 MRKRGKVYETTEKYSVMRAMRAIERADVVLVVINGEEGIIEQDKHIAGYAYEAGKASLFV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + + + I+ F+++A F+SA + + + HV ++
Sbjct: 294 VNKWDVVDKDDKTMHQFETKIRDHFLFMTYAPIVFLSAKTKQRLQKLLPVVQHVAQQHVM 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A+ +PP K R ++ Y Q PP +V+ N + + Y+RY
Sbjct: 354 RIQTHLLNDVISDAVAINPPPTDKGRRLRINYVTQVAVKPPTMVVFVNDPEIMHFSYERY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|225572013|ref|ZP_03780877.1| hypothetical protein RUMHYD_00307 [Blautia hydrogenotrophica DSM
10507]
gi|225040546|gb|EEG50792.1| ribosome biogenesis GTPase Der [Blautia hydrogenotrophica DSM
10507]
Length = 441
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 252/422 (59%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y E KSF +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVLAGENISIVKDTPGVTRDRIYAEVTWLDKSFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+I+F+VD RQG+V+ D + + LR+S +P+VLV+NK
Sbjct: 63 PDSNDIILSQMREQAQIAIDTADVIVFLVDVRQGMVDADAKVADMLRRSTKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LGIG P +SA G+ + L+ I+ K F + +
Sbjct: 123 DSFEKFMMDVYEFYNLGIGEPIPVSASSRLGLGDMLDEIV-------KHFPEHAGED-EE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E K+A+VGKPNVGKS+LIN L+GE RVI D GTTRD+I + ++ ++Y+ IDTAG
Sbjct: 175 DEIPKIAVVGKPNVGKSSLINKLVGEERVIVSDIAGTTRDAIDTKVKWQGREYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E IE++SVI+T+ ++ ANVV++++D + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKGKIKEEIERYSVIRTVTAVERANVVVIMIDGVEGVTEQDAKIAGIAHEKGKGVIIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ N + I + + I+ L ++ +A FISA + E+I+ V ++ +
Sbjct: 295 VNKWDAVEKNDKTIYRYTDKIRNTLAYMPYAELIFISAKTGLRLQRLFETIDMVVENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + L A+ P + R K+ Y Q PP VI N + + Y RY
Sbjct: 355 RIQTGVLNEILTEAMAMQQPPSDRGKRLKIFYMTQVSVRPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|295110181|emb|CBL24134.1| ribosome-associated GTPase EngA [Ruminococcus obeum A2-162]
Length = 441
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 258/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + KSF +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNALAGEMISIVKDTPGVTRDRIYADVTWLDKSFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+I+FI D +QGLV+ D + + LR+S +P+VLV+NK
Sbjct: 63 PDSGDIILSQMREQAQIAIDTADVIVFITDVQQGLVDSDAKVADMLRRSQKPVVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+++ + +FY LGIG P ISA GI + L+ I+ K+F + +
Sbjct: 123 DSVQKYMMDVYEFYNLGIGEPIAISAANRTGIGDMLDEIV------KEFPEDADTDEDDD 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I K+A+VGKPNVGKS+LIN LLGE+RVI D GTTRD++ + ++ +++YI IDTAG
Sbjct: 177 IP--KIAVVGKPNVGKSSLINKLLGEDRVIVSDIAGTTRDAVDAKVKWKDREYIFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E +E++SVI+T+ ++ A+VV++++DA + ++ QD IA +E G+ +++
Sbjct: 235 LRRKGKIKEELERYSVIRTVTAVERADVVVVVIDATEGVTEQDAKIAGIAHERGKGVVIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ + + I K N I++ L ++ +A FISA + E+I+ V ++ +
Sbjct: 295 VNKWDAVEKDDKTIYKHTNRIREVLAYMPYAELVFISAKSGQRLPRLFETIDAVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + L A+ P + R K+ Y Q G PP VI N + + Y RY
Sbjct: 355 RIQTGVLNEILSEAVAMQQPPSDRGKRLKIFYMTQVGVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
+E
Sbjct: 415 IE 416
>gi|374324515|ref|YP_005077644.1| GTP-binding protein Der [Paenibacillus terrae HPL-003]
gi|357203524|gb|AET61421.1| GTP-binding protein Der [Paenibacillus terrae HPL-003]
Length = 440
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 259/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR YG KSF IIDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + I+ + Q + AI E+D+I+F+ D + G+ + D+ + L +SG+P+++ +NK
Sbjct: 63 IDGEDEILKSIRMQAELAIEEADVIVFMSDAKAGITQSDEEVAQMLYRSGKPVIVAVNKV 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + + +FY G G+P IS +G G+ + L+ I T LP + +I+
Sbjct: 123 DNLERADLIYEFYSYGFGDPIAISGSHGIGLGDLLDAI-TSNLPELE-------EDIYDE 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + +KY+LIDTAG+
Sbjct: 175 DVIRVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I A+VV+++++ ++ I QD +IA + YE+G++ + V
Sbjct: 235 RKRGKVYETTEKYSVMRAMRAIERADVVLVVINGEEGIIEQDKHIAGYAYEAGKASLFVV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + + I+ F+++A F+SA + + + HV ++
Sbjct: 295 NKWDVVDKDDKTMRQFETKIRDHFLFMTYAPIVFLSAKTKQRLQKLLPVVQHVAQQHVLR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ +PP K R ++ Y Q PP +V+ N + + Y+RYL
Sbjct: 355 IQTHLLNDVISDAVAINPPPTDKGRRLRINYVTQVAVKPPTMVVFVNDPEMMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|354582633|ref|ZP_09001534.1| ribosome-associated GTPase EngA [Paenibacillus lactis 154]
gi|353198925|gb|EHB64391.1| ribosome-associated GTPase EngA [Paenibacillus lactis 154]
Length = 440
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 259/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNRL R A+V + PG+TRDR YG K+F +IDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGITRDRIYGSAEWNGKAFSVIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I+ + Q + AI E+D+IIF+ D + G+ + D+ + L +SG+P++L +NK
Sbjct: 63 IDGDDMILKSIRMQAELAIEEADVIIFMCDAKTGVTQSDEEVAQILFRSGKPVILAVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + + +FY LG G+P IS +G GI + L +++ LP + +
Sbjct: 123 DNLKRAEDIYEFYSLGFGDPVGISGSHGTGIGDLL-DVVVENLPDLA-------DDDYDE 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + ++Y+LIDTAG+
Sbjct: 175 DVIRVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQRYVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I A+VV++L++ ++ I QD +IA + YE+G++ + V
Sbjct: 235 RKRGKVYETTEKYSVMRAMRAIERADVVLVLINGEEGIIEQDKHIAGYAYEAGKASLFVV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + + I+ F+++A F+SA ++ + + HV + +
Sbjct: 295 NKWDVVEKDDKTMQQFERKIRDHFLFMTYAPIVFLSAKTKQRLHKLLPVVKHVAEQHSLR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + AI +PP K R ++ Y+ Q PP +V+ N + + Y+RYL
Sbjct: 355 VQTHLLNDVISDAIAINPPPTDKGRRLRINYSTQVAVKPPTMVVFVNDPELMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|374308439|ref|YP_005054870.1| ribosome-associated GTPase EngA [Filifactor alocis ATCC 35896]
gi|291166767|gb|EFE28813.1| ribosome-associated GTPase EngA [Filifactor alocis ATCC 35896]
Length = 437
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 253/423 (59%), Gaps = 13/423 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M+P++ +VGRPNVGKSTLFN+L SR A+V + PG+TRDR YGE F +IDTGG
Sbjct: 1 MRPIVAIVGRPNVGKSTLFNKLVGSRVAIVEDTPGVTRDRIYGEAEWLTDYFTVIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ + I +M +Q + A+ +D+I+F+V+GR G+ QD+ I LR++ +PIVL +NK
Sbjct: 61 DNDSDDIIPAQMRRQAELAMDTADVILFVVNGRDGVTPQDREIAEQLRRTKKPIVLAVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N N DFYELG+G P ISA G GI + L +++ P ++ +
Sbjct: 121 VDNKNLPDYFYDFYELGVGEPLPISASVGLGIGDLL-DVVAENFPKDSNMEENK------ 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IKVAIVGKPN GKS++IN +LGE RVI GTTRD+I + F +++Y+ IDTAG
Sbjct: 174 -DVIKVAIVGKPNAGKSSIINRILGEERVIVSPIAGTTRDAIDTYFHVKDQEYLFIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR+++K E IEK+SVI++ ++ A+VV++++DA IS QD IA + +G+S ++
Sbjct: 233 IRKKSKIDENIEKYSVIRSYAAVERADVVLIVIDANIGISEQDSKIAGLAHNAGKSTVIV 292
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + I +I+++L F+S+A F+S +ESIN VY S
Sbjct: 293 VNKWDLVEKDNKSIQTYTESIRQELPFMSYAPIIFVSTTTGQRFGKIIESINAVYQESQK 352
Query: 358 HLSTSRITRALISA-IKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ T + + A + N PP K R K+ YA Q PP I N + Y+R
Sbjct: 353 RVPTGLLNDVIGEAVVMNQPPSDKGR-RLKIYYATQVSVQPPTFTIFINDRELFHFSYQR 411
Query: 417 YLE 419
YLE
Sbjct: 412 YLE 414
>gi|375309055|ref|ZP_09774336.1| GTP-binding protein engA [Paenibacillus sp. Aloe-11]
gi|375078364|gb|EHS56591.1| GTP-binding protein engA [Paenibacillus sp. Aloe-11]
Length = 440
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 261/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR YG KSF IIDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + I+ + Q + AI E+D+I+F+ D + G+ + D+ + L +SG+PI++ +NK
Sbjct: 63 IDGEDIILKSIRMQAELAIEEADVIVFMSDAKAGITQSDEEVAQMLYRSGKPIIVAVNKV 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+N + + +FY G G+P +S +G GI + L+ I T LP +++ + +
Sbjct: 123 DNLNRADLIYEFYSYGFGDPIPVSGSHGTGIGDLLDAI-TSNLPE---LEEEHYDD---- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + +KY+LIDTAG+
Sbjct: 175 DVIRVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I A+VV+++++ ++ I QD +IA + YE+G++ + V
Sbjct: 235 RKRGKVYETTEKYSVMRAMRAIERADVVLVVINGEEGIIEQDKHIAGYAYEAGKASLFVV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + + I+ F+++A F+SA + + + HV ++
Sbjct: 295 NKWDVVDKDDKTMHQFETKIRDHFLFMTYAPIVFLSAKTKQRLQKLLPVVQHVAQQHVMR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ +PP K R ++ Y Q PP +V+ N + + Y+RYL
Sbjct: 355 IQTHLLNDVISDAVAINPPPTDKGRRLRINYVTQVAVKPPTMVVFVNDPEIMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|333924179|ref|YP_004497759.1| GTP-binding protein engA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749740|gb|AEF94847.1| GTP-binding protein engA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 442
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/422 (37%), Positives = 259/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKS LFNR+ SR A+V + PG+TRDR Y + + F ++DTGG +
Sbjct: 3 KPIVAIVGRPNVGKSMLFNRIVGSRIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGLD 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I ++ KQ + A+ E+D IIF+VD R GL D+ + LR + +P++L NK
Sbjct: 63 -FAEDVITSQIRKQAELAMREADAIIFVVDARAGLTTTDEEVAKVLRLTDKPVLLAANKV 121
Query: 122 ENINSS--ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + + DFY LG+G+P ISA G + L+ ++ + LP ++ + +
Sbjct: 122 EQFDLAKIPYYDFYRLGLGDPIPISAAEGLNTGDLLDELVKL-LPEQE-------EDPYP 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++A++G+PNVGKS+L+N++LGE RVI + PGTTRD+I S FE N K Y+++DTAG
Sbjct: 174 PDTIRIAVIGRPNVGKSSLVNAILGEERVIVSNIPGTTRDAIDSPFERNGKSYVIVDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRRN+ E++SV++ L++I +V ++LLDA + ++ QD I + +E G+++I+
Sbjct: 234 MRRRNRIDLPAERYSVVRALRAIDRCDVALMLLDATEGVTEQDKRIVGYAHEKGKAIILV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + + I+++L+FLS+A +ISA+ + +E ++ V + +
Sbjct: 294 VNKWDLIEKDDKTMNKFEKKIREELSFLSYAPTLYISALTKQRVPKVLEMVDFVAEQAGR 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T+ + + A + PP K + K+ YA QGG PP ++ N + + Y+RY
Sbjct: 354 RIPTADLNNLIREATQATPPPGDKHKKLKIFYATQGGVKPPTFILFVNEPELMHFSYERY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|308069529|ref|YP_003871134.1| GTP-binding protein engA [Paenibacillus polymyxa E681]
gi|305858808|gb|ADM70596.1| GTP-binding protein engA [Paenibacillus polymyxa E681]
Length = 440
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 258/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR YG KSF IIDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + I+ + Q + AI E+D+I+F+ D + G+ + D+ + L +SG+PI++ +NK
Sbjct: 63 IDGEDVILKSIRMQAELAIEEADVIVFMSDAKAGITQSDEEVAQMLYRSGKPIIVAVNKV 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N++ + + +FY G G+P +S +G GI + L+ I T LP E H
Sbjct: 123 DNLSRADLIYEFYSYGFGDPIAVSGSHGTGIGDLLDAI-TSNLP--------ELEEDHYD 173
Query: 181 E-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + +KY+LIDTAG
Sbjct: 174 EDVIRVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K +E EK+SV++ +++I A+VV+++++ ++ I QD +IA + YE+G++ +
Sbjct: 234 MRKRGKVYETTEKYSVMRAMRAIERADVVLVVINGEEGIIEQDKHIAGYAYEAGKASLFV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + + + I+ F+++A F+SA + + + HV ++
Sbjct: 294 VNKWDVVDKDDKTMHQFETKIRDHFLFMTYAPIVFLSAKTKQRLQKLLPVVQHVAQQHVL 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A+ +PP K R ++ Y Q PP +V+ N + + Y+RY
Sbjct: 354 RIQTHLLNDVISDAVAINPPPTDKGRRLRINYVTQVAVKPPTMVVFVNDPEIMHFSYERY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|310642585|ref|YP_003947343.1| GTP-binding protein enga [Paenibacillus polymyxa SC2]
gi|386041647|ref|YP_005960601.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
gi|309247535|gb|ADO57102.1| GTP-binding protein engA [Paenibacillus polymyxa SC2]
gi|343097685|emb|CCC85894.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
Length = 440
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 258/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR YG KSF IIDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTIFNRIIGDRLSIVEDKPGITRDRIYGISEWNGKSFSIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + I+ + Q + AI E+D+I+F+ D + G+ + D+ + L +SG+PI++ +NK
Sbjct: 63 IDGEDVILKSIRMQAELAIEEADVIVFMSDAKAGITQADEEVAQMLYRSGKPIIVAVNKV 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N++ + + +FY G G+P +S +G GI + L+ I T LP E H
Sbjct: 123 DNLSRADLIYEFYSYGFGDPIAVSGSHGTGIGDLLDAI-TSNLP--------ELEEDHYD 173
Query: 181 E-YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + +KY+LIDTAG
Sbjct: 174 EDVIRVALIGRPNVGKSSLVNAILGEERVIVSDIAGTTRDAIDTPFEKDGQKYVLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K +E EK+SV++ +++I A+VV+++++ ++ I QD +IA + YE+G++ +
Sbjct: 234 MRKRGKVYETTEKYSVMRAMRAIERADVVLVVINGEEGIIEQDKHIAGYAYEAGKASLFV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + + + I+ F+++A F+SA + + + HV ++
Sbjct: 294 VNKWDVVDKDDKTMHQFETKIRDHFLFMTYAPIVFLSAKTKQRLQKLLPVVQHVAQQHVM 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A+ +PP K R ++ Y Q PP +V+ N + + Y+RY
Sbjct: 354 RIQTHLLNDVISDAVAINPPPTDKGRRLRINYVTQVAVKPPTMVVFVNDPEIMHFSYERY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|56909884|dbj|BAD64411.1| EngA subfamily GTP-binding protein [Bacillus clausii KSM-K16]
Length = 439
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 263/421 (62%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R A+V + PG+TRDR Y +G F +IDTGG E
Sbjct: 5 KPVVAIVGRPNVGKSTIFNRIVGERVAIVEDLPGVTRDRLYSKGEWLNHEFYVIDTGGIE 64
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ ++ +M +Q + AI E+++IIF+V+GR+G+ D+ + N L +S +P+VL +NK
Sbjct: 65 LG-DEPLLVQMRQQAEIAIDEANVIIFMVNGREGITAADQEVANMLFRSKKPVVLAVNKV 123
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + + +FY LG G P+ IS +G GI + L+ ++ + F +E + ++
Sbjct: 124 DNPDMRELLYEFYSLGAGEPYGISGSHGLGIGDLLDEVV------RHF--PEENDDDYAD 175
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IK+A++G+PNVGKS+L+N+LLGE RVI PGTTRD+I + F + + Y++IDTAG+
Sbjct: 176 DTIKMALIGRPNVGKSSLVNALLGEERVIVSQIPGTTRDAIDTSFTRDGQHYVVIDTAGM 235
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV+++LK+I ++VV+++LD ++ I QD IA + +E+GR++++ V
Sbjct: 236 RKRGKVYEATEKYSVLRSLKAIERSDVVLVVLDGEEGIIEQDKKIAGYAHEAGRAIVIVV 295
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + + +I+ + FLS+A F+SA ++ + + V +S +
Sbjct: 296 NKWDAVKKDDKTMQTFVEDIRSEFQFLSYAPICFLSAKTKQRLHLLLPEVRKVSESHHLR 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + ++ A+ +P K R K+ Y Q PP V N + + Y+R+L
Sbjct: 356 VPTHVLNDMIMDAVAMNPTPTDKGKRLKINYVTQVAVQPPTFVFFVNEPELMHFSYRRFL 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|161349991|ref|YP_175372.2| GTP-binding protein EngA [Bacillus clausii KSM-K16]
Length = 437
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 263/421 (62%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R A+V + PG+TRDR Y +G F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERVAIVEDLPGVTRDRLYSKGEWLNHEFYVIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ ++ +M +Q + AI E+++IIF+V+GR+G+ D+ + N L +S +P+VL +NK
Sbjct: 63 LG-DEPLLVQMRQQAEIAIDEANVIIFMVNGREGITAADQEVANMLFRSKKPVVLAVNKV 121
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + + +FY LG G P+ IS +G GI + L+ ++ + F +E + ++
Sbjct: 122 DNPDMRELLYEFYSLGAGEPYGISGSHGLGIGDLLDEVV------RHF--PEENDDDYAD 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IK+A++G+PNVGKS+L+N+LLGE RVI PGTTRD+I + F + + Y++IDTAG+
Sbjct: 174 DTIKMALIGRPNVGKSSLVNALLGEERVIVSQIPGTTRDAIDTSFTRDGQHYVVIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV+++LK+I ++VV+++LD ++ I QD IA + +E+GR++++ V
Sbjct: 234 RKRGKVYEATEKYSVLRSLKAIERSDVVLVVLDGEEGIIEQDKKIAGYAHEAGRAIVIVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + + +I+ + FLS+A F+SA ++ + + V +S +
Sbjct: 294 NKWDAVKKDDKTMQTFVEDIRSEFQFLSYAPICFLSAKTKQRLHLLLPEVRKVSESHHLR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + ++ A+ +P K R K+ Y Q PP V N + + Y+R+L
Sbjct: 354 VPTHVLNDMIMDAVAMNPTPTDKGKRLKINYVTQVAVQPPTFVFFVNEPELMHFSYRRFL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|291557289|emb|CBL34406.1| ribosome-associated GTPase EngA [Eubacterium siraeum V10Sc8a]
Length = 439
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 254/423 (60%), Gaps = 11/423 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGRPNVGKSTLFNR+ R ++V + PG+TRDR Y + K F+++DTGG
Sbjct: 1 MNGIVAVVGRPNVGKSTLFNRIVGKRMSIVDDTPGVTRDRIYAKAEWLGKEFMLVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ K I+ +M Q + AI ++D+IIF+ D G+ D + L+KSG+P+VL +NK
Sbjct: 61 EPDSKDVILSQMRMQAQLAIDKADVIIFVTDVTSGVTANDADVAAMLQKSGKPVVLCVNK 120
Query: 121 SENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
+ I +FY LG+G+P +S+++G+G + L+ + +P + ++E++
Sbjct: 121 CDGIGEVPPEFYEFYNLGLGDPIAVSSVHGHGTGDLLDAVFE-NMPEEN--PQREYSE-- 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ IKVA++GKPN GKS+L+N + GE R+I + GTTRD++ ++ E + ++Y+LIDTA
Sbjct: 176 --DAIKVAVIGKPNAGKSSLVNKIAGEQRMIVSNIAGTTRDAVDTVIERDGQEYVLIDTA 233
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR++K E IEK+SV++ +I A+V ++++DA + + QD +A + +E G++ ++
Sbjct: 234 GIRRKSKVNEQIEKYSVLRAYMAIDRADVCVIMIDATEGFTEQDSKVAGYAHEQGKASVI 293
Query: 299 CVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+NKWD++ + + + ++ +F+S+A F FISA+ ++ E I + Y +I
Sbjct: 294 AINKWDAVEKDGKTMQEFTKKLEVDFSFMSYAPFVFISALTGQRVDKLFEQIKYTYSQNI 353
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ST + L A P K R KL Y Q PP VI N + Y+R
Sbjct: 354 RRISTGTLNDMLGYATARVQPPSDKGKRLKLYYMTQASAKPPTFVIFCNDKELFHYSYQR 413
Query: 417 YLE 419
Y+E
Sbjct: 414 YIE 416
>gi|414160851|ref|ZP_11417114.1| GTPase Der [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876530|gb|EKS24428.1| GTPase Der [Staphylococcus simulans ACS-120-V-Sch1]
Length = 436
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 256/421 (60%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPVIAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D++I L K+ +P+VL +NK
Sbjct: 63 LS-DAPFQTQIRAQAEVAIDEADVIIFMVNQREGLTQTDEMIAQMLYKTNKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G P IS +G G+ + L+ + K FK E +++
Sbjct: 122 DNPEMRADIYDFYALGFGEPFPISGSHGLGLGDLLDEV-------AKHFKD-EGDDLYDE 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+++++G+PNVGKS+L+N++LGE+RVI + GTTRD+I + + Y + Y+LIDTAG+
Sbjct: 174 DTIRLSLIGRPNVGKSSLVNAILGEDRVIVSNIAGTTRDAIDTEYSYEGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV+++LDA++ I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVLDAEEGIIEQDKRVAGYAHEEGKAIVIVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++ ++K FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTLEKDSKTMKKFEDEVRKNFQFLDYAPIAFVSAKEKQRLRTLFPLINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R K+ YA Q PP V+ N + + YKRYL
Sbjct: 354 VQSSTLNEVITDAIAMNPTPTDKGRRLKVFYATQVAIEPPTFVVFVNDEELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|121535817|ref|ZP_01667617.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
gi|121305589|gb|EAX46531.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
Length = 440
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 256/421 (60%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + R ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNFIAKKRVSIVEDLPGVTRDRIYMDAEWLGREFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
E I+ Q + AI E+D+IIF+VDG+ G+ D+ + LR + +P+VL +NK
Sbjct: 63 IETTDRILAATRHQAQLAIEEADVIIFVVDGKTGITTADEEVAAMLRSTRKPVVLAVNKI 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++ ++ +FY LG+G+P ISA I + L+ ++ + LP + ++ +
Sbjct: 123 DSPKDEPAVYEFYNLGLGDPIAISATNALSIGDLLDRVIEL-LPQTEDAEEDD------- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IKVA +G+PNVGKS+L+N+LLGE RVI D PGTTRD+I + FE + K+ILIDTAG+
Sbjct: 175 DVIKVAFIGRPNVGKSSLVNALLGEERVIVSDIPGTTRDAIDTYFEKDGTKFILIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ + + +E++SVI++L+++ A+VV++++DA ++ QD IA + +E+GR +I+ V
Sbjct: 235 RRKARINQPVERYSVIRSLRAVERADVVLVVIDAVDGVTEQDKKIAGYAHEAGRGIIIVV 294
Query: 301 NKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I + + ++ NI+ ++ F+ +A F SA+ + E + V + +
Sbjct: 295 NKWDLIEKDSKTALRYTENIRSEMAFIQYAPVLFTSALTKQRVQRISELVKFVAEQHAMR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ TS + + + AI+ +PP + R K+ Y Q PP + N + + Y RYL
Sbjct: 355 VQTSVLNQVIEDAIRINPPPTGRGTRLKIFYTTQAEVKPPTFIFFVNEPEIMHFSYLRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|291546330|emb|CBL19438.1| ribosome-associated GTPase EngA [Ruminococcus sp. SR1/5]
Length = 441
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 254/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + ++F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNALAGDNISIVKDTPGVTRDRIYADVTWLDRTFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ M +Q + AI +D+IIFI D RQGLV+ D + + LR+SG+P+ LV+NK
Sbjct: 63 PDSSDIILSRMREQAQIAIDTADVIIFITDVRQGLVDSDAKVADMLRRSGKPVRLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LGIG P ISA G+ + L+ ++ K+F K E +
Sbjct: 123 DSHQKYMMDVYEFYNLGIGEPIPISAANRQGLGDMLDEVI------KEFPDKSEEEDQDD 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I K+AIVGKPNVGKS+LIN LLGE RVI + GTTRD+I + +N K YI IDTAG
Sbjct: 177 IP--KIAIVGKPNVGKSSLINKLLGEERVIVSNIAGTTRDAIDTKVTWNKKDYIFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E IE++SVI+T+ ++ A+VV++++DA + ++ QD IA ++ G+ +IV
Sbjct: 235 LRRKGKVKEEIERYSVIRTVTAVERADVVVVVIDASEGVTEQDAKIAGIAHDRGKGIIVA 294
Query: 300 VNKWDSIIHNQRKIIKNN--IKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I K+ I++ L+F+ +A FISA + E+I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTIYKHTEKIRQILSFMPYAQIIFISAKTGQRLPKLFENIDTVIENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + L A+ P + R K+ Y Q PP VI N + + Y RY
Sbjct: 355 RIQTGVLNEILSEAVALQQPPSDRGRRLKIFYMTQVAVKPPTFVIFVNDKELMHFSYVRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|404329834|ref|ZP_10970282.1| GTP-binding protein Der [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 438
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 256/421 (60%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP + +VGRPNVGKST+FNR+ R A+V + PG+TRDR YG G F +IDTGG E
Sbjct: 3 KPTVAIVGRPNVGKSTVFNRIVGGRTAIVEDKPGVTRDRLYGNGEWLNHEFHVIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ ++ +M Q + A+ ESD+I+F+VDGR G+ + D+ + LR+SG+P+V+ +NK
Sbjct: 63 IG-DEPLLGQMRAQAEIAVDESDVIVFLVDGRTGMTDADEQVAQILRRSGKPVVVGVNKL 121
Query: 122 EN-INSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N ++ +FY LG+G+P +S +G G+ + L+ ++ ++F + E +
Sbjct: 122 DNYAQRNLVYEFYTLGLGDPLPLSGAHGMGLGDLLDAVI------ERFPEAAERS--EQS 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+ A++G+PNVGKS+L N++LG+ RVI D GTTRD+I S F + + +I++DTAGI
Sbjct: 174 DAIRFALIGRPNVGKSSLTNAILGKERVIVSDIAGTTRDAIDSEFSRDGQDFIIVDTAGI 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR + +E EK+SV++ +I E++VV+L++D ++ I QD IA + +++GR +I+ V
Sbjct: 234 RRRGRVYEKTEKYSVLRAQHAIEESDVVVLVIDGEEGIIEQDKKIAGYAHDAGRGMIIAV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + + I+ + FLS+A F+SA+ + + I V ++ +
Sbjct: 294 NKWDAVAKDDKTQDRFRKKIRDEFQFLSYAPIIFLSALTGKRVPQLLPVIRQVAENHSLR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ TS + ++ + PP K R K+ Y Q PP+ V+ N + Y R+L
Sbjct: 354 IQTSILNDCVMDTVAMTPPPSDKGKRLKIYYTAQVAVRPPVFVLFVNDPDLLHFSYVRHL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|323703070|ref|ZP_08114725.1| ribosome-associated GTPase EngA [Desulfotomaculum nigrificans DSM
574]
gi|323531964|gb|EGB21848.1| ribosome-associated GTPase EngA [Desulfotomaculum nigrificans DSM
574]
Length = 442
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 259/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKS LFNR+ SR A+V + PG+TRDR Y + + F ++DTGG +
Sbjct: 3 KPIVAIVGRPNVGKSMLFNRIVGSRIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGLD 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I ++ KQ + A+ E+D +IF+VD R GL D+ + LR + +P++L NK
Sbjct: 63 -FAEDVITSQIRKQAELAMREADAVIFVVDARAGLTTTDEEVAKVLRLTDKPVLLAANKV 121
Query: 122 ENINSS--ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + + DFY LG+G+P ISA G + L+ ++ + LP ++ + +
Sbjct: 122 EQFDLAKIPYYDFYRLGLGDPIPISAAEGLNTGDLLDELVKL-LPEQE-------EDPYP 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++A++G+PNVGKS+L+N++LGE RVI + PGTTRD+I S FE N K Y+++DTAG
Sbjct: 174 PDTIRIAVIGRPNVGKSSLVNAILGEERVIVSNIPGTTRDAIDSPFERNGKSYVIVDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRRN+ E++SV++ L++I +V ++LLDA + ++ QD I + +E G+++I+
Sbjct: 234 MRRRNRIDLPAERYSVVRALRAIDRCDVALMLLDATEGVTEQDKRIVGYAHEKGKAIILV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + + I+++L+FLS+A +ISA+ + +E ++ V + +
Sbjct: 294 VNKWDLIEKDDKTMNKFEKKIREELSFLSYAPTLYISALTKQRVPKVLEMVDFVAEQAGR 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T+ + + A + PP K + K+ YA QGG PP ++ N + + Y+RY
Sbjct: 354 RIPTADLNNLIREATQATPPPGDKHKKLKIFYATQGGVKPPTFILFVNEPELMHFSYERY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|224541354|ref|ZP_03681893.1| hypothetical protein CATMIT_00514 [Catenibacterium mitsuokai DSM
15897]
gi|224525688|gb|EEF94793.1| ribosome biogenesis GTPase Der [Catenibacterium mitsuokai DSM
15897]
Length = 435
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 269/422 (63%), Gaps = 15/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
K ++ +VGR NVGKSTLFNR+ R ++V + PG+TRDR Y + K F IIDTGG E
Sbjct: 3 KGIVAIVGRANVGKSTLFNRIIGERVSIVEDVPGVTRDRIYAKASWLTKEFRIIDTGGIE 62
Query: 62 PEVKKGIMHEMTK-QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+K E K Q + AI E+D+IIF+V+GR+GL +D + L+KSG+P++L +NK
Sbjct: 63 --LKNADFTEQIKTQAEIAIEEADVIIFVVNGREGLTSEDNFVARMLQKSGKPVLLAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+++ ++ DFY LGIG P +S+ +G G+ + L+ ++ + LP + +
Sbjct: 121 IDDVAFRDNIYDFYSLGIGEPIPVSSAHGIGVGDLLDEVIRV-LPDE--------EDEFE 171
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IKV+I+G+PNVGKS+L N++LGE+RVI + GTTRD+I + FE + KY +IDTAG
Sbjct: 172 EDEIKVSIIGRPNVGKSSLTNAILGEDRVIVSNIEGTTRDAIDTAFEKDGYKYRIIDTAG 231
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R++ K +E IEK+SV++ LK++ +++V++ ++D ++ I QD ++A + +E G+S+++
Sbjct: 232 MRKKGKVYENIEKYSVLRALKAVEQSDVILCVVDGERGIIEQDKHVAGYAHELGKSVVLV 291
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ +++ + K N++++ +L +A F+SA+K IN+ + I Y ++
Sbjct: 292 VNKWDAVTKDEKTMAKMEKNLREQFKYLDYARIAFVSALKKQRINTLFDLIVEAYMNAHK 351
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++TS + ++ A +P + R K+ YA+Q PP V+ N K++ YKRY
Sbjct: 352 RVTTSVLNDVIVDAQAMNPTTTFEGGRLKIYYANQVAVQPPTFVLFVNDPKFMHFSYKRY 411
Query: 418 LE 419
LE
Sbjct: 412 LE 413
>gi|404482585|ref|ZP_11017811.1| GTPase Der [Clostridiales bacterium OBRC5-5]
gi|404344250|gb|EJZ70608.1| GTPase Der [Clostridiales bacterium OBRC5-5]
Length = 443
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 256/422 (60%), Gaps = 11/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ ++GRPNVGKSTLFN + ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPVVAIIGRPNVGKSTLFNAIAGEPISIVKDTPGVTRDRIYADCTWLNMNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+I+FI D RQGLV+ D + + LRKS +P+VL +NK
Sbjct: 63 PDSSDIILSQMREQAEIAIETADVIVFITDVRQGLVDSDSKVCDMLRKSRKPVVLAVNKV 122
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+++ + +FY LGIG+P +SA GI + LE + FK K+ +
Sbjct: 123 DSMAKFGNDVYEFYNLGIGDPIPVSAASRLGIGDLLEAVAL-------HFKNKDTEDEED 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AIVGKPNVGKS++IN L G+NRVI D GTTRD+I ++ N ++Y+ IDTAG
Sbjct: 176 DDRPRIAIVGKPNVGKSSIINRLTGQNRVIVSDIAGTTRDAIDTVVVNNKQEYVFIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E IE++S+I+T+ ++ A+VVIL++DA + ++ QD IA ++ G+ +IV
Sbjct: 236 LRRKSKVKEDIERYSIIRTVTAVDRADVVILVIDANEGVTEQDAKIAGIAHDKGKGIIVA 295
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + I + +NIK+ L+F+ +A F FISA+ + E I+ V ++ +
Sbjct: 296 VNKWDLIEKDNKTIYEYTDNIKRILSFMPYAEFVFISALSGQRLQKLFEMIDIVRENQTL 355
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A P K R K+ Y Q PP VI N + + Y+RY
Sbjct: 356 RIQTGVLNEIISEATVMQQPPSDKGKRLKIFYTTQVAVKPPTFVIFVNIKQLMHFSYQRY 415
Query: 418 LE 419
LE
Sbjct: 416 LE 417
>gi|51892817|ref|YP_075508.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863]
gi|81826113|sp|Q67NS9.1|DER_SYMTH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|51856506|dbj|BAD40664.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863]
Length = 471
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/425 (38%), Positives = 261/425 (61%), Gaps = 15/425 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKSTLFNRLT SR A+V + PG+TRDR Y + ++ ++DTGG
Sbjct: 1 MKPIVAIVGRPNVGKSTLFNRLTQSRHAIVEDQPGVTRDRLYADTEWNGRTLTLVDTGGI 60
Query: 61 EPEVKKG--IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVI 118
+ + K+G I +T+Q + AI E+D+IIF+VD G+ D + + LR+ +P+++ +
Sbjct: 61 QLD-KEGDTIEAHVTRQAELAIREADVIIFVVDVTDGVTAPDLEVADLLRRQRKPVIVAV 119
Query: 119 NKSENI-NSSISLDFYELGIGNPHI-ISALYGNGIKNFLENILTIELPYKKFFKKKEFTN 176
NK EN+ +L+F+ LG+ P I +SA +G G + L+ ++ LP + +E
Sbjct: 120 NKVENLKREDEALEFWALGL-EPLINVSAEHGLGTGDLLDAVVAA-LPDLSEPEPEEGGP 177
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ +VA++G+PNVGKS+L+N++LGE RVI D PGTTRD+I L E K++LID
Sbjct: 178 V------RVAVIGRPNVGKSSLVNAILGEERVIVSDVPGTTRDAIDVLVERGEDKFLLID 231
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+RR+ + E +E++SV++ L+++ A VV++++DAQ ++ QD IA + +E+G++
Sbjct: 232 TAGMRRKARVEEAVERYSVMRALRAVERAQVVLIVIDAQDGVTEQDQRIAGYAHENGKAC 291
Query: 297 IVCVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
IV VNKWD I + R + K ++ +L F+ +AM +F+SA ++ + I +
Sbjct: 292 IVVVNKWDLIEKDDRTMAKMTEEVRMRLAFMDYAMIHFVSAKTRARVHRLLPLIKEAAAN 351
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ST + + A+ +PP K R K+ YA Q +PP V N + + Y
Sbjct: 352 HARRISTRELNDLVREAVALNPPPSDKGRRLKIFYATQPHVSPPGFVFFVNDSELVHFSY 411
Query: 415 KRYLE 419
+RYLE
Sbjct: 412 QRYLE 416
>gi|167749166|ref|ZP_02421293.1| hypothetical protein EUBSIR_00117 [Eubacterium siraeum DSM 15702]
gi|167657844|gb|EDS01974.1| ribosome biogenesis GTPase Der [Eubacterium siraeum DSM 15702]
gi|291530430|emb|CBK96015.1| ribosome-associated GTPase EngA [Eubacterium siraeum 70/3]
Length = 439
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 254/423 (60%), Gaps = 11/423 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M ++ +VGRPNVGKSTLFNR+ R ++V + PG+TRDR Y + K F+++DTGG
Sbjct: 1 MNGIVAVVGRPNVGKSTLFNRIVGKRMSIVDDTPGVTRDRIYAKAEWLGKEFMLVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP+ K I+ +M Q + AI ++D+IIF+ D G+ D + L+KSG+P+VL +NK
Sbjct: 61 EPDSKDVILSQMRMQAQLAIDKADVIIFVTDVTSGVTANDADVAAMLQKSGKPVVLCVNK 120
Query: 121 SENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
+ I +FY LG+G+P +S+++G+G + L+ + +P + ++E++
Sbjct: 121 CDGIGEVPPEFYEFYNLGLGDPIAVSSVHGHGTGDLLDAVFE-NMPEEN--PQREYSE-- 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ IKVA++GKPN GKS+L+N + GE R+I + GTTRD++ ++ E + ++Y+LIDTA
Sbjct: 176 --DAIKVAVIGKPNAGKSSLVNKIAGEQRMIVSNIAGTTRDAVDTVIERDGQEYVLIDTA 233
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR++K E IEK+SV++ ++ A+V ++++DA + + QD +A + +E G++ ++
Sbjct: 234 GIRRKSKVNEQIEKYSVLRAYMAVDRADVCVIMIDATEGFTEQDSKVAGYAHEQGKASVI 293
Query: 299 CVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+NKWD++ + + + ++ +F+S+A F FISA+ ++ E I + Y +I
Sbjct: 294 AINKWDAVEKDGKTMQEFTKKLEVDFSFMSYAPFVFISALTGQRVDKLFEQIKYTYSQNI 353
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ST + L A P K R KL Y Q PP VI N + Y+R
Sbjct: 354 RRISTGTLNDMLGYATARVQPPSDKGKRLKLYYMTQASAKPPTFVIFCNDKELFHYSYQR 413
Query: 417 YLE 419
Y+E
Sbjct: 414 YIE 416
>gi|73662580|ref|YP_301361.1| GTP-binding protein EngA [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418576138|ref|ZP_13140284.1| GTP-binding protein EngA [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|123642627|sp|Q49XS9.1|DER_STAS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|72495095|dbj|BAE18416.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|379325200|gb|EHY92332.1| GTP-binding protein EngA [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 436
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 261/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEVAIDEADVIIFMVNVREGLTQSDEMVAQMLYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G+P+ IS +G G+ + L+ ++ K FK++E + +
Sbjct: 122 DNPEMRNEIYDFYSLGFGDPYPISGSHGLGLGDLLDAVV-------KHFKEEE-PDPYDD 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD++ + + Y+++ Y+LIDTAG+
Sbjct: 174 DTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAVDTEYSYDDQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NV+++++DA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYENTEKYSVLRALKAIERSNVILIVIDAEQGIIEQDKRVAGYAHEEGKAIVIVV 293
Query: 301 NKWDSIIH--NQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ N K K+ ++K+ FL +A F+SA + + + I ++
Sbjct: 294 NKWDTVDKETNTMKKFKDEVRKEFQFLDYAEIAFVSAKEKQRLRTLFPYIKEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP ++ N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFIVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|331002253|ref|ZP_08325772.1| GTP-binding protein engA [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411347|gb|EGG90763.1| GTP-binding protein engA [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 443
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 255/422 (60%), Gaps = 11/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ ++GRPNVGKSTLFN + ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPVVAIIGRPNVGKSTLFNAIAGEPISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+I+FI D RQGLV+ D + + LRKS +P+VL +NK
Sbjct: 63 PDSSDIILSQMREQAEIAIETADVIVFITDVRQGLVDSDSKVCDMLRKSRKPVVLAVNKV 122
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++I + +FY LGIG+P ISA GI + L+ + FK K +
Sbjct: 123 DSIAKFGNDVYEFYNLGIGDPVAISAASRLGIGDLLDAVAV-------HFKSKGNESEED 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AIVGKPNVGKS++IN L G+NRVI D GTTRD+I ++ N ++Y+ IDTAG
Sbjct: 176 DDRPRIAIVGKPNVGKSSIINRLTGQNRVIVSDIAGTTRDAIDTVVVNNKQEYVFIDTAG 235
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E IE++S+I+T+ ++ A+VVIL++DA + ++ QD IA ++ G+ +IV
Sbjct: 236 LRRKSKVKEDIERYSIIRTVTAVERADVVILVIDANEGVTEQDAKIAGIAHDRGKGIIVA 295
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + I + +NIK+ L+F+ +A + FISA+ + E I+ V ++ +
Sbjct: 296 VNKWDLVEKDNKTIYEYTDNIKRILSFMPYAEYIFISALSGQRLQKLFEMIDIVRENQTL 355
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A P K R K+ Y Q PP VI N + + Y+RY
Sbjct: 356 RIQTGVLNEIISEATVMQQPPSDKGKRLKIFYTTQVAVKPPTFVIFVNIKQLMHFSYQRY 415
Query: 418 LE 419
LE
Sbjct: 416 LE 417
>gi|163813998|ref|ZP_02205391.1| hypothetical protein COPEUT_00150 [Coprococcus eutactus ATCC 27759]
gi|158450692|gb|EDP27687.1| ribosome biogenesis GTPase Der [Coprococcus eutactus ATCC 27759]
Length = 445
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/422 (38%), Positives = 253/422 (59%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN L + ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 8 KPIVAIVGRPNVGKSTLFNVLAGEKISIVQDTPGVTRDRIYADINWLDYNFTLIDTGGIE 67
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ M +Q + AI +D+IIF+ D RQG+V+ D + + LR+S +PIVLV+NK
Sbjct: 68 PETDNIILKSMREQAEIAIETADVIIFMTDVRQGMVDDDSKVADMLRRSKKPIVLVVNKV 127
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LG+G+PH IS GI + L+ +++ F + +
Sbjct: 128 DSFEKFMPDVYEFYNLGLGDPHPISGSSRLGIGDMLDEVVS-------HFDESAKEEVED 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++AI+GKPNVGKS++IN LLGE+RVI D GTTRD+I + N ++Y+ IDTAG
Sbjct: 181 -ERPRIAIIGKPNVGKSSIINKLLGEDRVIVSDIAGTTRDAIDTEVVRNGREYVFIDTAG 239
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+++K E IE++S+I+T+ ++ NV +L++DA + I+ QD IA +E G+ +I+
Sbjct: 240 LRKKSKIKEDIERYSIIRTVSAVERCNVAVLVIDATEGITDQDAKIAGIAHERGKGMIIA 299
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I K I+ KL+++ +A FISA + E+I+ V ++ +
Sbjct: 300 VNKWDAIEKNDKTIYKFTEEIRNKLSYMPYAELLFISAETGQRLPKLFETIDAVIENHSL 359
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 360 RVATGVLNEIMSEAVAMQQPPSDKGKRLKLFYITQVSVKPPTFVIFVNDKELMHFSYTRY 419
Query: 418 LE 419
+E
Sbjct: 420 IE 421
>gi|268608007|ref|ZP_06141738.1| small GTP-binding protein [Ruminococcus flavefaciens FD-1]
Length = 442
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 249/421 (59%), Gaps = 12/421 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y + K F+++DTGG EP
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLIGQRLSIVEDTPGVTRDRIYSKCEWRGKEFMVVDTGGIEP 63
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ I+ +M +Q++ AI ++D+I+F+ D R G+ D + L KSG+PIVL +NK +
Sbjct: 64 DSDDVILSQMRRQSELAIEKADVIVFVTDIRCGVTADDYTVAQMLLKSGKPIVLAVNKVD 123
Query: 123 NINSS-ISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
N+ + L +FY LG+G+P IS+++G+G + L+ + Y ++E+ +
Sbjct: 124 NLGEPPLELYEFYNLGLGDPFPISSVHGHGTGDMLDKVYE----YLPASDEEEYDD---- 175
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IKVA++GKPN GKS+LIN + GE RVI D GTTRDS ++ E K++ IDTAGI
Sbjct: 176 DCIKVAVIGKPNAGKSSLINKIAGEERVIVSDIAGTTRDSTDTVIENEQGKFVFIDTAGI 235
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+++K E IE +SV++ ++ A+V +++LDA + + QD +A + +E G++ +V V
Sbjct: 236 RKKSKVTEKIEHYSVLRAYMAVDRADVCVIMLDATEGFTEQDSKVAGYAHEQGKACVVAV 295
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I + + + + ++ +F+S+ F FISA IN E I + Y+ + +
Sbjct: 296 NKWDLIEKDDKTMQEFRTKLENDFSFMSYVPFVFISAKTGQRINKLYELIKYTYEQNSMR 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + L A P K R K+ Y Q PP V NR Y+RY+
Sbjct: 356 ISTGMLNDVLAYATTRVQPPSDKGRRLKIYYMTQPSTKPPTFVTFVNRADLFHFSYRRYI 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|334341454|ref|YP_004546434.1| ribosome-associated GTPase EngA [Desulfotomaculum ruminis DSM 2154]
gi|334092808|gb|AEG61148.1| ribosome-associated GTPase EngA [Desulfotomaculum ruminis DSM 2154]
Length = 440
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/422 (36%), Positives = 259/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKS+LFNR+ +R A+V + PG+TRDR Y + + F ++DTGG +
Sbjct: 3 KPIVAIVGRPNVGKSSLFNRIVGARIAIVEDMPGVTRDRLYQDAEWQGREFTLVDTGGLD 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I ++ KQ + AI E+D I+F+VD R+GL D+ + LR++ +P++LV NK
Sbjct: 63 -FAEDVITAQIRKQAELAIKEADAILFLVDAREGLTSIDQEVAGVLRRTDKPVLLVANKV 121
Query: 122 ENINSS-IS-LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
E + S IS DFY+LG+G+P +SA G + L+ ++T+ LP + +
Sbjct: 122 EQFDQSKISYFDFYQLGLGDPIPVSAAEGLNTGDLLDQLITL-LPQPD-------EDPYP 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++A++G+PNVGKS+L+N++LGE RVI PGTTRD+I + FE K Y++IDTAG
Sbjct: 174 PDTIRIAVIGRPNVGKSSLVNAILGEERVIVSSIPGTTRDAIDTPFERGGKNYVIIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RRR K E++SV++ L+++ +V ++L+DA + ++ QD I + +E G+++I+
Sbjct: 234 MRRRKKIDLPTERYSVVRALRAVDRCDVTLMLIDATEGVAEQDKKIVGYAHEKGKAIILV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
NKWD I + + + + +++L FLS++ +ISA+ + +E ++ V + +
Sbjct: 294 ANKWDLIEKDDKTMNKFERKFREELPFLSYSPILYISALTGQRLPKVLEMVDFVVEQASK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T+ + + A + PP K R K+ YA QGG PP ++ N + + Y+RY
Sbjct: 354 RVPTADLNNLIREATQATPPPADKHRRLKIFYATQGGVKPPTFILFVNDPELMHFSYQRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|404370873|ref|ZP_10976189.1| GTPase Der [Clostridium sp. 7_2_43FAA]
gi|226913004|gb|EEH98205.1| GTPase Der [Clostridium sp. 7_2_43FAA]
Length = 438
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/421 (39%), Positives = 250/421 (59%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGQRISIVQDTPGVTRDRVYAQAEWLNYNFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + I+ +M +Q AI +D+IIF+VDG++GL D + N LRKS + +VLV+NK
Sbjct: 63 PEREDIIVKQMRRQANIAIETADVIIFVVDGKEGLTPADHEVANMLRKSKKEVVLVVNKV 122
Query: 122 ENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+++ + +FY LGIG+P ISA G+ + L+ ++ + KF
Sbjct: 123 DSLKEEENAWEFYNLGIGDPVTISASQALGLGDMLDRVVE---NFDKFN-----EEDEED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E+I++A++GKPNVGKS+LIN LLGE R+I D PGTTRDSI S E K+IL+DTAG+
Sbjct: 175 EFIRIAMIGKPNVGKSSLINRLLGEERLIVSDIPGTTRDSIDSALETEQGKFILVDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SVI+T +I A+V IL++DA + ++ QD I + +E ++++V V
Sbjct: 235 RRKSKVKEEIERYSVIRTYAAIERADVCILMIDATEGVTEQDEKIIGYAHEMNKAIMVIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I + + + K ++ L FL +A + FISA + +E+ YD+
Sbjct: 295 NKWDLIEKDDKTMQRYKEELQMNLKFLKYAKYLFISAKTGQRTHKVLETAKECYDNYSKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ P L R K+ YA Q PP + N Y+RYL
Sbjct: 355 IPTGILNEVINKAVLMKEPPIVGLKRMKIYYATQVAAKPPKFIFFVNDSSASHFSYQRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|288556077|ref|YP_003428012.1| GTP-binding protein Der [Bacillus pseudofirmus OF4]
gi|288547237|gb|ADC51120.1| GTP-binding protein EngA [Bacillus pseudofirmus OF4]
Length = 437
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 264/421 (62%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R A+V + PG+TRDR Y G + F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERVAIVEDMPGVTRDRLYSHGEWLDREFNLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ ++++M +Q + AI E+D+I+FIV+GR+G+ D+ + L +S +P+VL +NK
Sbjct: 63 -LADEPLLNQMREQAELAIEEADVIVFIVNGREGITSADQEVAKILFRSKKPVVLGVNKV 121
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + + +FY LGIGNP IS +G G+ + L+ +L K F +K E + +
Sbjct: 122 DNPDMHDLLYEFYSLGIGNPFPISGSHGLGLGDLLDEVL------KHFPEKVE--DDYDP 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+++++G+PNVGKS+L+N++LGE RVI + PGTTRD+I + F + + Y+LIDTAG+
Sbjct: 174 DTIRISLIGRPNVGKSSLVNAMLGEERVIVSNIPGTTRDAIDTSFTRDGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV+++LK+I +NVV+++++A++ I QD IA + +E+GR++I+ V
Sbjct: 234 RKRGKVYESTEKYSVLRSLKAIERSNVVLVVINAEEGIIEQDKKIAGYAHEAGRAVIIVV 293
Query: 301 NKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+I + + + K I+ + FLS+A F SA + + + V + +
Sbjct: 294 NKWDAIERDDKTMQKFEQKIRDEFLFLSYAPILFTSAKTKQRLQHVLPMVKKVSQNHNLR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T+ + ++ A+ +P K R ++ Y Q PP V N + + Y+R+L
Sbjct: 354 VPTNVLNDLIMDAVAMNPTPTDKGKRLRINYVTQVAVEPPTFVFFVNEPELLHFSYERFL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|429727335|ref|ZP_19262109.1| ribosome biogenesis GTPase Der [Peptostreptococcus anaerobius VPI
4330]
gi|429152787|gb|EKX95597.1| ribosome biogenesis GTPase Der [Peptostreptococcus anaerobius VPI
4330]
Length = 439
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/426 (38%), Positives = 260/426 (61%), Gaps = 21/426 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+P++ +VGRPNVGKSTLFN+LT ++ ++V + PG+TRDR +GE K F IIDTGG E
Sbjct: 4 RPIVAIVGRPNVGKSTLFNKLTGTKISIVEDTPGVTRDRIFGEVEWLNKYFTIIDTGGIE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M Q A+ + +I+F+VDG+ GL D+ + + LRK+ +P++LV+NK
Sbjct: 64 PESDDIIISQMRNQAMLAVDMAHVILFVVDGKGGLTAADREVADILRKTNKPVLLVVNKI 123
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++ + ++ DFYELG+ P +S G+ + L+ I+ K F + +
Sbjct: 124 DSKSQWDNVYDFYELGLDMPFAVSGANAIGLGDLLDEIV------------KNFPDGLNT 171
Query: 181 EY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
EY IKVAI GKPN GKS+++N++LGE RVI GTTRD+I + FE + K++LID
Sbjct: 172 EYDEDVIKVAITGKPNAGKSSILNNILGEERVIVSPIAGTTRDAIDTYFEQGDNKFLLID 231
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAGIRRR+K +E +E+FSVI+++ ++ A+VV++++DA + ++ QD IA ++ G++
Sbjct: 232 TAGIRRRSKVYENVERFSVIRSMSAVDRADVVLIVIDATEGVTEQDTKIAGIAHDEGKAC 291
Query: 297 IVCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
I VNKWD + + + + K +I++K F+S+A F+SA+ I +E++ +V
Sbjct: 292 IFVVNKWDLVEKDNKTMGNYKMSIREKFPFMSYAPIVFVSAVTNQRIAKILETVVYVSSE 351
Query: 355 SIIHLSTSRITRALISAIK-NHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
+STS + + + A+ N PP K R K+ Y Q G PP + N +
Sbjct: 352 QNKRVSTSVLNQVIAEAVMLNQPPSDKGR-RLKIYYGTQTGVKPPTFTLFINDKELTHFS 410
Query: 414 YKRYLE 419
Y RY+E
Sbjct: 411 YTRYIE 416
>gi|350270470|ref|YP_004881778.1| GTPase [Oscillibacter valericigenes Sjm18-20]
gi|348595312|dbj|BAK99272.1| GTPase [Oscillibacter valericigenes Sjm18-20]
Length = 441
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 255/424 (60%), Gaps = 14/424 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKP++ +VGRPNVGKS LFN+L R ++V + PG+TRDR YGE ++F +IDTGG
Sbjct: 1 MKPIVAIVGRPNVGKSMLFNKLIGRRLSIVEDTPGVTRDRIYGETDWNGRAFTLIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP I+ M +Q + AI + +IIF+ D + GL D + L +SG+PIVL +NK
Sbjct: 61 EPRTDDQILTFMRQQAQLAIDHATVIIFLTDVKTGLTASDHEVAGMLLRSGKPIVLAVNK 120
Query: 121 SENINSSISLDFYE---LGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
++ +++ DFYE LG+G+P +SA++G+G + L+ + + P ++ +KE +
Sbjct: 121 MDS-TGTVNPDFYEFYNLGLGDPIAVSAVHGHGTGDLLDACVRLFPPQEE---EKEDND- 175
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
IKVA++GKPNVGKS+L+N +LGE R I D GTTRD+I SLFE K++ IDT
Sbjct: 176 ----AIKVALIGKPNVGKSSLLNRILGEERSIVSDVAGTTRDAIDSLFENKQGKFLFIDT 231
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+++K E IEK+SV++ +I ++V ++L+D + ++ QD +A +E+G++ I
Sbjct: 232 AGMRKKSKVDEDIEKYSVLRATMAIERSDVCLILIDGRDGVTEQDTKVAGLAHEAGKASI 291
Query: 298 VCVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD + + + + K +I++ L F+++A FISA+ + E I V + +
Sbjct: 292 IVVNKWDLVDKDDKTMDKLTADIRRDLGFMTYAPVLFISALTGQRVEKLFELIVAVSNQA 351
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ ++T + L A P K R K+ Y Q G PP V+ N + Y+
Sbjct: 352 SLRITTGMLNNVLSDAQTRVQPPSDKGRRLKIYYMTQVGIRPPHFVVFCNDARLFHFSYQ 411
Query: 416 RYLE 419
RYLE
Sbjct: 412 RYLE 415
>gi|374605722|ref|ZP_09678640.1| GTP-binding protein Der [Paenibacillus dendritiformis C454]
gi|374388717|gb|EHQ60121.1| GTP-binding protein Der [Paenibacillus dendritiformis C454]
Length = 440
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 258/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R A+V + PG+TRDR YG G K F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRVIGDRLAIVEDKPGVTRDRIYGTGEWNGKPFNVIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ ++ + Q + AI E+D+I+F+ + + G+ + D+ + L +SG+P+VL INK
Sbjct: 63 VYGEDEMLRSIRVQAELAIEEADVIVFMCEAKSGVTQADEEVAEILFRSGKPVVLAINKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + +FY LG G+P IS +G G+ + L+ ++ +F + E +
Sbjct: 123 DNLQRMDDVYEFYSLGFGDPVPISGSHGTGLGDLLDEVV------HRFPETTEEEYDEDV 176
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+VA++G+PNVGKS+L+N++LGE+RVI D GTTRD+I + FE + ++++LIDTAG+
Sbjct: 177 --IRVALIGRPNVGKSSLVNAILGEDRVIVSDIAGTTRDAIDTPFEKDGQRFVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++++K+I A+VV+++++ ++ I QD +IA + +E+G++ + V
Sbjct: 235 RKRGKVYETTEKYSVMRSMKAIERADVVLVVINGEEGIIEQDKHIAGYAHEAGKAALFVV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + N R + + I+ F+ +A F+SA ++ + I HV +
Sbjct: 295 NKWDVVEKNDRTMHEFETKIRDHFLFMPYAPIVFLSAKTKQRLHKLLPVIEHVAEQHAKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ +PP K R ++ YA Q PP IVI N + + Y+RYL
Sbjct: 355 IPTHLLNDVVSDAVAYNPPPTDKGRRLRINYATQVAVKPPTIVIFVNDPELMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|407474170|ref|YP_006788570.1| GTP-binding protein EngA [Clostridium acidurici 9a]
gi|407050678|gb|AFS78723.1| GTP-binding protein EngA [Clostridium acidurici 9a]
Length = 439
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 256/422 (60%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKSTLFNR+ R ++V + PG+TRDR Y E K F +IDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTLFNRIVGERISIVEDKPGVTRDRIYAEAEWLNKYFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE K I+ +M +Q + AI D+I+F+VDG +GL D+ + LR+SG+ ++LV NK
Sbjct: 63 PESKDIILSQMRRQAEIAIETGDVILFVVDGLEGLTSTDREVAEMLRRSGKEVLLVCNKI 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ + S+ +FYELG+G+P +ISA G+ + L+ ++ P K E+ +
Sbjct: 123 DTPKNPDSIYEFYELGLGSPIVISAGQSLGLGDLLDEVIG-HFPEDK---DTEYED---- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IKVA++GKPN GKS+LIN +LGENRVI D GTTRD+I + F KY+LIDTAG+
Sbjct: 175 DVIKVAVIGKPNAGKSSLINKVLGENRVIVSDIAGTTRDAIDTPFTRGEDKYVLIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ E IE++SVI+TL +I ++V ++++DA + ++ QD IA + + +G++ ++ V
Sbjct: 235 RRKKNVDESIERYSVIRTLMAIERSDVCVIMIDATEGVTEQDAKIAGYAHNNGKASVIVV 294
Query: 301 NKWDSIIHNQRKII--KNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+I + + + + L+F+++A FISA +N + I V ++ +
Sbjct: 295 NKWDAIEKGDKTYLDFEKEVMNTLSFMTYAPIIFISAKTGQRVNKLFDLIKIVSNNHAMR 354
Query: 359 LSTSRITRALISAI-KNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ N PP K R K+ Y Q PP VI N + + Y RY
Sbjct: 355 ITTGVLNDIINEAVLMNQPPTDKGK-RLKIYYGTQVASKPPKFVIFINDKELMHFSYGRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|418321724|ref|ZP_12933063.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus VCU006]
gi|418875414|ref|ZP_13429671.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC93]
gi|365224339|gb|EHM65604.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus VCU006]
gi|377769970|gb|EHT93736.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC93]
Length = 436
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 157/426 (36%), Positives = 259/426 (60%), Gaps = 22/426 (5%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-----IELPYKKFFKKKEFT 175
+N+ + DFY LG G P+ IS +G G+ + L+ +++ E PY +
Sbjct: 122 DNMEMRTDVYDFYSLGFGEPYPISGSHGLGLGDLLDAVVSHFGEEEEEPYDE-------- 173
Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
+ I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD+I + + Y+ + Y+LI
Sbjct: 174 -----DTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLI 228
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG+R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G++
Sbjct: 229 DTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKA 288
Query: 296 LIVCVNKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
+++ VNKWD++ + + K ++ ++K+ FL +A F+SA + + + IN +
Sbjct: 289 VVIVVNKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERTRLRTLFPYINEASE 348
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
+ + +S + + AI +P K R + YA Q PP V+ N ++ +
Sbjct: 349 NHKKRVQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVVFVNDVELMHFS 408
Query: 414 YKRYLE 419
YKRYLE
Sbjct: 409 YKRYLE 414
>gi|33519978|ref|NP_878810.1| GTP-binding protein EngA [Candidatus Blochmannia floridanus]
gi|33504324|emb|CAD83216.1| predicted GTPase [Candidatus Blochmannia floridanus]
Length = 485
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 187/445 (42%), Positives = 265/445 (59%), Gaps = 30/445 (6%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSF--IIIDTGGF 60
PV+VLVG+ NVGKSTLFNRLT +RDALV++YPGLTRDR YG YI K+F I+IDTGGF
Sbjct: 10 PVIVLVGQENVGKSTLFNRLTCTRDALVSSYPGLTRDRKYG--YIKYKNFKFILIDTGGF 67
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
I + QT AI ES II+F+VDG++ +D I +LRK + I +VINK
Sbjct: 68 NIFSDTLIQDCINDQTNIAIQESCIILFVVDGKKQGSSEDWNIITYLRKLKKGIFVVINK 127
Query: 121 SENI---NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
+N N+ D+Y GI N IISA++G GI L+ I L KK F N
Sbjct: 128 IDNAISYNNYKIWDYYLYGIKNVVIISAVHGYGISTLLDKIYLQSLKNSFDGVKKCFFNT 187
Query: 178 H------------------SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRD 219
+ + E I V I+G+PN GKST +N LL E R+I D PGTTRD
Sbjct: 188 YIGFDDYQKNSEKNLLLNQNNEPIIVVIIGRPNSGKSTFVNYLLKEERMIVSDIPGTTRD 247
Query: 220 SIKSLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNIS 279
S+ YNN KY+ +DTAGIR++ V E+ S +KTL+ + A+V + +LD Q+ I
Sbjct: 248 SVYIPITYNNDKYMFVDTAGIRKKKHVSSVAEQISKLKTLQILKYAHVTLFILDIQEGIV 307
Query: 280 AQDINIANFIYESGRSLIVCVNKWD---SIIHNQRKIIKNNIKKKLNFLSFAMFNFISAI 336
QD+++ NFI +S +SLI+ VNK+D S + ++K + KK++FL+F ++ISA+
Sbjct: 308 NQDLSLLNFITKSSKSLIIAVNKYDIFSSKTGFDKTLMKEELNKKISFLNFVKIHYISAL 367
Query: 337 KLNNINSFMESINHVYDSSIIHLSTSRITRALISAIKNHPP--CRKKLIRPKLRYAHQGG 394
+ I + +SI ++D S ++T+++TR + AI +PP R PKL++ H G
Sbjct: 368 YGSGIKNLFQSIKKIHDFSKQKINTAQLTRVMHEAIIKYPPPFIRGTKFAPKLKFVHVGS 427
Query: 395 KNPPIIVIHGNRLKYIGNDYKRYLE 419
NP + +IHG R+ + N Y++YL
Sbjct: 428 YNPVVFIIHGTRVSSLSNAYRKYLR 452
>gi|431794252|ref|YP_007221157.1| ribosome-associated GTPase EngA [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784478|gb|AGA69761.1| ribosome-associated GTPase EngA [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 441
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 158/422 (37%), Positives = 261/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEG-YIGKKSFIIIDTGGF 60
KPV+ +VGRPNVGKSTLFNRL A+V N PG+TRDR Y + ++G+K F IIDTGG
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRLAGGLVAIVENRPGVTRDRLYRDAEWLGRK-FTIIDTGGI 61
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I +M +Q + AI E+D+I+F++D + D +I N LR+SG+P++L N
Sbjct: 62 EFVNENTPISSQMRRQAEIAIEEADVIVFVIDAQVSPTPDDDMIANTLRRSGKPVILAAN 121
Query: 120 KSENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
K E+ + +FY LG+G P ISA++G I + L+ +++ P E
Sbjct: 122 KVEHFEKAELYEFYRLGLGEPIPISAVHGMNIGDLLDEVIS-HFP-------DELEEEID 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I++A+VG+PNVGKS+L+N+LLGE RVI + PGTTRD+I S F+++ K Y++IDTAG
Sbjct: 174 PDTIRIAVVGRPNVGKSSLVNTLLGEERVIVSNIPGTTRDAIDSAFKHDGKSYVIIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ + E+ E++SV ++L+++ ++V+++L++A + ++ QD IA + +E+G+ +++
Sbjct: 234 MRRKGRIEELTEQYSVARSLRAVDRSDVILMLIEAVEGVTEQDKKIAGYAHEAGKGIVLV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + + + I+++L F+ +A FISA + ++ ++ V + +
Sbjct: 294 VNKWDLVEKDDKTMNRFEKTIREELGFMQYAPTLFISAKTGQRVTKLLDLVDFVAEQNST 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T+ + + +PP K R K+ YA Q G PP V N + + Y+RY
Sbjct: 354 RVATATLNTLVREWTHLNPPPSDKGRRLKILYATQVGVKPPTFVFFVNDHELMHFSYRRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|358052402|ref|ZP_09146285.1| GTP-binding protein EngA [Staphylococcus simiae CCM 7213]
gi|357258097|gb|EHJ08271.1| GTP-binding protein EngA [Staphylococcus simiae CCM 7213]
Length = 436
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 261/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VG+PNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPVVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIEEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + DFY LG G P+ IS +G G+ + L+ ++ + F +++E + +
Sbjct: 122 DNMEMRNDIYDFYSLGFGEPYPISGSHGLGLGDLLDAVV------EHFGEEQE--DPYDD 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+++I+G+PNVGKS+L+N++LGE RVI + GTTRD++ + + Y+ + Y+LIDTAG+
Sbjct: 174 DTIRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSYDGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKAVVIVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++ ++K+ FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKEGTRLRTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP VI N ++ + YKRYL
Sbjct: 354 VQSSTLNEVITDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVIFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|392425150|ref|YP_006466144.1| ribosome-associated GTPase EngA [Desulfosporosinus acidiphilus SJ4]
gi|391355113|gb|AFM40812.1| ribosome-associated GTPase EngA [Desulfosporosinus acidiphilus SJ4]
Length = 443
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 265/424 (62%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEG-YIGKKSFIIIDTGGF 60
KPV+ +VGRPNVGKSTLFNR+ A+V N PG+TRDR Y + ++G+K F +IDTGG
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRIAGGLVAIVENKPGVTRDRLYRDAEWLGRK-FALIDTGGI 61
Query: 61 EPEVK-KGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E + + I +M +Q + A+ E+D++IF+VD + D LI LR+SG+P++L N
Sbjct: 62 EFKAEGTPIAAQMRRQAEIAMEEADVVIFVVDAQLAPTPDDDLIARTLRRSGKPVLLAAN 121
Query: 120 KSENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
K EN + DF LG+G P ISA++G + + L+ +++ LP
Sbjct: 122 KVENFEKAEGQLYDFLTLGLGEPIPISAVHGMNMGDLLDMVVS-NLPEND-------GED 173
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ + I+++++G+PNVGKS+L+N++LG+ RVI + PGTTRD+I + FE+ K YILIDT
Sbjct: 174 NDPDIIRISVIGRPNVGKSSLVNTMLGKERVIVSNIPGTTRDAIDTPFEFEGKNYILIDT 233
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RR+ + E+ E++SV+++L ++ ++V+++LLDA + ++ QD IA + +++G++++
Sbjct: 234 AGMRRKGRIEELTEQYSVVRSLHAVDRSDVILMLLDATEGVTEQDKKIAGYAHDAGKAIV 293
Query: 298 VCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD + +++ I + I+++L FL +A FISA ++ +E ++ V + +
Sbjct: 294 IVVNKWDLVEKDEKTINKFEKTIREELGFLQYAPTMFISAKTGQRVHKILELVDFVVEQN 353
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ + + + +PP K R K+ Y Q G PP VI N + + YK
Sbjct: 354 STRVTTATLNTLMREWLHLNPPPTDKGRRLKVLYLTQAGVKPPTFVIFVNDPELMHFSYK 413
Query: 416 RYLE 419
RYLE
Sbjct: 414 RYLE 417
>gi|153005016|ref|YP_001379341.1| GTP-binding protein EngA [Anaeromyxobacter sp. Fw109-5]
gi|152028589|gb|ABS26357.1| small GTP-binding protein [Anaeromyxobacter sp. Fw109-5]
Length = 471
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 248/431 (57%), Gaps = 14/431 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+ ++ LVGRPNVGKSTLFNRL R A+V + PG+TRDR+Y + ++ ++DTGGFE
Sbjct: 10 RALVALVGRPNVGKSTLFNRLAGRRAAIVQDVPGVTRDRNYADFSFDGRALSVVDTGGFE 69
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + +M ++ +Q + A+ E+ ++ +VDGR+GL D+ + + LR++G+P+ + +NK
Sbjct: 70 PESRDRLMSQVRQQAQLAVEEAAAVVLVVDGREGLTAVDRSVADLLRRAGKPLFVAVNKV 129
Query: 122 ENINSSISL---DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNI 177
+ + + +FY+LG G H +SA +G G+ + +E I+ ++LP +
Sbjct: 130 DTARTEEEIPLAEFYQLGFGEVHSVSAEHGRGVGDLVEAIVEKLQLPEAPPAPEDVEEPE 189
Query: 178 HSIEY------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKK 231
E I++AIVG+PNVGKST +NSLLG R + D PGTTRD+I SL E ++
Sbjct: 190 EVTEADRPKGDIRLAIVGRPNVGKSTFVNSLLGHERFVVSDVPGTTRDAIDSLVEQRGQR 249
Query: 232 YILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYE 291
+++ DTAGIRR++ + +E +SV++++K+I A VV LLDA + QD + I E
Sbjct: 250 FVVTDTAGIRRKSAIAQAVEAYSVVRSMKAIDRAEVVACLLDATEAGVEQDARLLGLIAE 309
Query: 292 SGRSLIVCVNKWDSIIHNQ---RKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
++L+V +NKWD I + + + + K+L F+SFA F+SA + + ++
Sbjct: 310 KAKALLVVINKWD-IAEREGATQDWYRKELHKRLPFVSFAPMLFVSAKEGRGVTRVLDRA 368
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ + T + L + + HP K KL Y Q PP VI NR +
Sbjct: 369 ARLVEQYRARFPTPALNELLEAIQEEHPAPLAKGHPVKLYYVAQVAYAPPTFVIQCNRPE 428
Query: 409 YIGNDYKRYLE 419
IG Y+R++E
Sbjct: 429 AIGEPYRRFVE 439
>gi|347549336|ref|YP_004855664.1| hypothetical protein LIV_1917 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346982407|emb|CBW86403.1| Putative unknown protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 436
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 262/421 (62%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y K F IIDTGG +
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKDFNIIDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + ++ Q + AI E+D+IIFI +GR+G+ + D+ + L +S +PIVL INK
Sbjct: 63 LS-DEPFLEQIRAQAEIAIDEADVIIFITNGREGVTDADEQVAKILYRSNKPIVLAINKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G P+ IS +G G+ + L+ + + F K+E + +
Sbjct: 122 DNPEMRDQIYDFYSLGFGEPYPISGSHGLGLGDMLDAV-------RAHFPKEEEED-YPD 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ +K +++G+PNVGKS+++N+LLGE+RVI D GTTRD+I + + ++ + Y++IDTAG+
Sbjct: 174 DTVKFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I ++VV+++++A++ I QD IA + +++GR++I+ V
Sbjct: 234 RKRGKVYESTEKYSVLRAMRAIERSDVVLVVINAEEGIREQDKRIAGYAHDAGRAIIIVV 293
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+I +++ I +I+++ FLS+A F+SA +N+ IN V D+ +
Sbjct: 294 NKWDAINKDEKTINVWTEDIREQFQFLSYAPIVFVSAKTKQRLNNLFPLINQVSDNHSLR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + A+ +P K R K+ Y Q PP V+ N + + Y+R+L
Sbjct: 354 VQSSMLNDVISDAVAMNPSPMDKGKRLKIFYTTQVAVKPPTFVVFVNDPELMHFSYERFL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|289550746|ref|YP_003471650.1| GTP-binding protein EngA [Staphylococcus lugdunensis HKU09-01]
gi|289180278|gb|ADC87523.1| GTP-binding protein EngA [Staphylococcus lugdunensis HKU09-01]
Length = 436
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 259/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VG+PNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPVVAIVGKPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS + +VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQILYKSKKTVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G P+ IS +G G+ + L+ ++ K F K+ E + +
Sbjct: 122 DNPEMKTDIYDFYALGFGEPYPISGSHGLGLGDLLDEVV------KHFNKETE--DPYDE 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+++I+G+PNVGKS+L+N++LGE RVI + GTTRD+I + + Y+N+ Y+LIDTAG+
Sbjct: 174 DTIRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYTYDNQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA++ I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLIVIDAEEGIIEQDKRVAGYAHEEGKAVVIVV 293
Query: 301 NKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + + K ++I+K FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFTDDIRKNFQFLDYAQIAFVSAKERQRLRTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP VI N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVIFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|167747191|ref|ZP_02419318.1| hypothetical protein ANACAC_01905 [Anaerostipes caccae DSM 14662]
gi|317473608|ref|ZP_07932897.1| ribosome-associated GTPase EngA [Anaerostipes sp. 3_2_56FAA]
gi|167654151|gb|EDR98280.1| ribosome biogenesis GTPase Der [Anaerostipes caccae DSM 14662]
gi|316898898|gb|EFV20923.1| ribosome-associated GTPase EngA [Anaerostipes sp. 3_2_56FAA]
Length = 440
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 253/422 (59%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNALAGENISIVKDTPGVTRDRIYADISWLNYNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ M +Q + AI +D+IIF+VD RQGLV+ D + + LR+S +P+VL +NK+
Sbjct: 63 PDSGDVILSRMREQAQIAIETADVIIFLVDVRQGLVDADFQVADMLRRSQKPVVLAVNKA 122
Query: 122 ENINSSI--SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + + +FY LG+G+PH +SA G + L+ + +E K +++E
Sbjct: 123 DNYEKFLPDTYEFYNLGLGDPHPVSANSKLGFGDLLDEV--VENCDPKALEEEED----- 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E K+AI+GKPN GKS++IN +LGE RVI D GTTRD+I ++ + N K+Y+ IDTAG
Sbjct: 176 -ERPKIAIIGKPNAGKSSIINKMLGEERVIVSDVAGTTRDAIDTVIQKNGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++SVI+T+ ++ +V +L++DA + I+ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEDLERYSVIRTVSAVERCDVAVLVIDATEGITEQDAKIAGIAHERGKGMIIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + I K N I++ L ++S+A FISA + ++ V ++ +
Sbjct: 295 VNKWDLVEKDDKTIYKFTNKIREVLAYMSYAELVFISAKTGQRFPKIFDMLDAVIENHAM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + L A+ P K R KL Y Q PP V+ N + + Y RY
Sbjct: 355 RVQTGVLNEILTEAVAMKQPPSDKGKRLKLYYMTQVSVKPPTFVVFINDRQLMHFSYTRY 414
Query: 418 LE 419
+E
Sbjct: 415 IE 416
>gi|403380787|ref|ZP_10922844.1| GTP-binding protein Der [Paenibacillus sp. JC66]
Length = 440
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 259/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNRL R A+V + PG+TRDR YG G +F +IDTGG E
Sbjct: 3 RPVIAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGVTRDRLYGTGEWLDTTFNVIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + I+ + Q + AI E+D+IIF+VDG+ GL D+ I L +SG+PIVL +NK
Sbjct: 63 IDGEDEIIKSVKVQAELAIEEADVIIFMVDGKAGLTPADEEIGQLLFRSGKPIVLAVNKV 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + + +FY LG G+P IS +G GI + L+ L P + + +
Sbjct: 123 DNPQRAEMIYEFYSLGFGDPIPISGSHGIGIGDLLDAALEKCPPDDQ--------DEYGE 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E IKVA++G+PNVGKS+L+N++LGE RVI GTTRD+I + FE + + ++LIDTAG+
Sbjct: 175 EVIKVALIGRPNVGKSSLVNAILGEERVIVSGVAGTTRDAIDTPFERDGQDFVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +K+I A+VV+++++ ++ I QD +IA + +E+G++ ++ V
Sbjct: 235 RKRGKVYENTEKYSVMRAMKAIERADVVLIVINGEEGIIEQDKHIAGYAHEAGKACVLIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + + +I+ F+S+A F+SA ++ + + V ++ +
Sbjct: 295 NKWDAVEKDDKTLQQFTQSIRDHFLFMSYAPILFVSAKTKQRLHKLLPLVVQVAENHAMR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
++T + ++ A+ +PP K R ++ Y Q PP ++ N + + Y+RYL
Sbjct: 355 VTTHLLNDIIMDAVAINPPPTDKGRRLRINYVTQVAVKPPTFILFVNSPELMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|336437031|ref|ZP_08616740.1| GTP-binding protein engA [Lachnospiraceae bacterium 1_4_56FAA]
gi|336006165|gb|EGN36201.1| GTP-binding protein engA [Lachnospiraceae bacterium 1_4_56FAA]
Length = 442
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 258/422 (61%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADVSWLDREFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + I+ +M +Q + AI +D+IIFI D RQGL + D +T+ LR+SG+P++L +NK
Sbjct: 63 PESRDIILSQMREQAQIAIDTADVIIFITDVRQGLQDADSKVTDMLRRSGKPVILTVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + + +FY LGIG+P ISA G+ + L+ + P K ++++
Sbjct: 123 DNFDKFMPDVYEFYNLGIGDPVPISASSRLGLGDMLDAVCA-HFPEKTEEEEEDERP--- 178
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVGKPNVGKS++IN L+GENRVI D GTTRD+I + ++ K+YI IDTAG
Sbjct: 179 ----RIAIVGKPNVGKSSIINKLVGENRVIVSDIAGTTRDAIDTDVVHDGKEYIFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVLMVIDAVEGVTEQDAKIAGIAHERGKGIIIV 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + + ++ +++ L+F+ +A ++SA ++ + I+ V + +
Sbjct: 295 VNKWDAIEKNDKTMREYESKVRQILSFMPYAEIMYVSAKTGQRLHKLYDMIDMVIANQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RVATGVLNEIMTEAVAMQQPPSDKGKRLKLYYITQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|254480079|ref|ZP_05093327.1| putative GTPase [marine gamma proteobacterium HTCC2148]
gi|214039641|gb|EEB80300.1| putative GTPase [marine gamma proteobacterium HTCC2148]
Length = 417
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 236/368 (64%), Gaps = 7/368 (1%)
Query: 53 IIIDTGGFEPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQ 112
++IDTGG + + GI EM Q+ AI E+D ++F+VD R+GL D+ + LR+ +
Sbjct: 1 MVIDTGGISGD-EDGIDSEMADQSLVAIEEADAVLFLVDAREGLNPADQALAKHLRQRNK 59
Query: 113 PIVLVINKSENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK 171
LV+NK + +++ I S DFY LG+ + I+A +G G++N + ++ ++ +
Sbjct: 60 SFHLVVNKIDGLDADIASSDFYALGVESMFAIAASHGRGVRNMIGEVMANFPEEERTEED 119
Query: 172 KEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKK 231
+ + N +VA+VG+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI ++ + ++
Sbjct: 120 EAYPN-----STRVAVVGRPNVGKSTLVNRLLGEDRVVVFDEPGTTRDSIYIDYQRDEQE 174
Query: 232 YILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYE 291
Y LIDTAG+RRR + +EKFS++KTLK+I +A+VVIL++DA + I QD+++ E
Sbjct: 175 YTLIDTAGVRRRKNVKQTVEKFSIVKTLKAIDDAHVVILVMDAHEGIVDQDMHLLGHCIE 234
Query: 292 SGRSLIVCVNKWDSIIHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHV 351
GR L++ VNKWD I +QR IK+ + ++L F FA +FISA+ + +SIN
Sbjct: 235 KGRGLVLAVNKWDGIEPDQRDWIKSELGRRLAFADFADTHFISALHGTGVGHLYKSINAA 294
Query: 352 YDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIG 411
++S+ LST+ +TR L A+ +H P R K+RYAH GG+NPP+IVIHGN+ +
Sbjct: 295 FESATRELSTNALTRILEGAVFDHAPPMINGRRIKMRYAHAGGRNPPLIVIHGNQTGKVP 354
Query: 412 NDYKRYLE 419
Y RYLE
Sbjct: 355 TSYARYLE 362
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 12/165 (7%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE- 63
+ +VGRPNVGKSTL NRL +V + PG TRD Y + ++ + +IDT G
Sbjct: 128 VAVVGRPNVGKSTLVNRLLGEDRVVVFDEPGTTRDSIYIDYQRDEQEYTLIDTAGVRRRK 187
Query: 64 -VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
VK+ + +T +AI ++ ++I ++D +G+V+QD + + G+ +VL +NK +
Sbjct: 188 NVKQTVEKFSIVKTLKAIDDAHVVILVMDAHEGIVDQDMHLLGHCIEKGRGLVLAVNKWD 247
Query: 123 NINSSISLDF--YELG-------IGNPHIISALYGNGIKNFLENI 158
I D+ ELG + H ISAL+G G+ + ++I
Sbjct: 248 GIEPD-QRDWIKSELGRRLAFADFADTHFISALHGTGVGHLYKSI 291
>gi|291519504|emb|CBK74725.1| ribosome-associated GTPase EngA [Butyrivibrio fibrisolvens 16/4]
Length = 441
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 257/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKSTLFN L R ++V + PG+TRDR Y + F +IDTGG E
Sbjct: 3 RPVVAIVGRPNVGKSTLFNALAGERISIVKDTPGVTRDRIYADVSWLNYDFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+IIF+VD +QGL + D + + LR+S +P++LV+NK
Sbjct: 63 PDTNDIILSQMREQAQIAIDTADVIIFLVDVKQGLQDSDSKVADMLRRSHKPVILVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ +FY LGIG+P +SA G + L+ ++ P + ++++ T
Sbjct: 123 DSFERDMADVYEFYNLGIGDPIPVSASSRLGFGDMLDKVVEY-FPEQSGEEEEDDTP--- 178
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
K+A++GKPNVGKS+LIN L GE RVI D GTTRD++ + YN+K YI IDTAG
Sbjct: 179 ----KIAVIGKPNVGKSSLINKLCGEERVIVSDIAGTTRDAVDTRVRYNHKDYIFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E++S+++ + S+ +A+VVI+++DA + ++ QD IA +E G+ +I+C
Sbjct: 235 LRRKSKIKEDLERYSIVRAVASVEKADVVIIMIDATEGVTEQDAKIAGIAHERGKGIIIC 294
Query: 300 VNKWDSIIHNQRKIIKNN--IKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + + ++ I++ L+F+ +A FIS + E+I+ V +++ +
Sbjct: 295 VNKWDAIEKNDKTMKEHETKIRQILSFMPYASILFISVKSGQRLGKIYETIDAVIENNSM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R K+ Y Q PP VI N + Y RY
Sbjct: 355 RIATGVLNEIVSEAVALQQPPTDKGKRLKIFYTTQVAVKPPTFVIFVNEKYLMHFSYVRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|418055771|ref|ZP_12693825.1| GTP-binding protein engA [Hyphomicrobium denitrificans 1NES1]
gi|353210049|gb|EHB75451.1| GTP-binding protein engA [Hyphomicrobium denitrificans 1NES1]
Length = 469
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 167/433 (38%), Positives = 243/433 (56%), Gaps = 16/433 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+ PV+ +VGRPNVGKSTLFNRLT +R ALV++ PGLTRDR G I +IDT G
Sbjct: 9 LAPVVAIVGRPNVGKSTLFNRLTGTRAALVSDLPGLTRDRRDGIAEIFGTELRLIDTAGL 68
Query: 61 EPEVKKG-IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E E ++G I M KQT+QAI +D+++F++D R G+ D R+SG+P+VLV N
Sbjct: 69 E-EARQGTIADRMRKQTEQAIAAADLVLFVIDARAGVTAADSSFARIARQSGKPVVLVAN 127
Query: 120 KSENINSSIS-LDFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNI 177
K+E + LD + LG+G P ISA +G GI + +I+ + L K KK +
Sbjct: 128 KAEGRQGTDGVLDAFSLGLGAPIAISAEHGEGIGDLAADIVAALGLKIPKTAKKGRDHDA 187
Query: 178 HSIE----------YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY 227
++ I+VAIVG+PN GKSTL+N+LLGE+R+IT PG TRDS+ S +Y
Sbjct: 188 EPVDDKKLPPERPRPIRVAIVGRPNAGKSTLVNALLGEDRMITGPEPGLTRDSVASELDY 247
Query: 228 NNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIAN 287
+ +L DTAG+RR+ K E EK + +++I A VV+LL+DA+ QD+ I +
Sbjct: 248 KGQSILLFDTAGLRRKAKITETAEKLAASDAVRAIRFAEVVVLLIDAEHPFEHQDLTIGH 307
Query: 288 FIYESGRSLIVCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
+ E GR+L+V +NKWD I Q+ + +K + + L + ISA + ++ M
Sbjct: 308 RVTEEGRALVVAINKWDLIPEKQKTLRDLKKTVAESLAQVPNVPVVAISARSESGLDQLM 367
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGN 405
+I + + +ST ++ R L A+ H P R K+RY Q PP V
Sbjct: 368 SAIIKTHATWNRRVSTPQLNRWLEEALSRHAPPAAAGKRIKIRYVTQPSTRPPTFVAFCQ 427
Query: 406 RLKYIGNDYKRYL 418
R + Y +YL
Sbjct: 428 RADALPKSYLKYL 440
>gi|402299917|ref|ZP_10819480.1| GTP-binding protein Der [Bacillus alcalophilus ATCC 27647]
gi|401724956|gb|EJS98278.1| GTP-binding protein Der [Bacillus alcalophilus ATCC 27647]
Length = 437
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 264/421 (62%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R A+V + PG+TRDR Y +G + F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERVAIVEDMPGVTRDRLYSKGEWLNRDFNLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ ++ +M +Q + AI E+D+I+FIV+G++G+ D+ + L +S +P+VL +NK
Sbjct: 63 LG-DEPLLVQMREQAELAIKEADVIVFIVNGKEGITGADQEVAKLLFRSKKPVVLGVNKI 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N L +FY LGIG P+ IS +G G+ + L+ ++ P E T
Sbjct: 122 DNPEMREELYEFYSLGIGEPYPISGSHGLGLGDLLDAVIEY-FPEDDGDDYDEET----- 175
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+++++G+PNVGKS+L+N++LGE RVI + PGTTRD+I + F + +KY+LIDTAG+
Sbjct: 176 --IRISLIGRPNVGKSSLVNAMLGEERVIVSNIPGTTRDAIDTPFTKDEQKYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV+++LK+I +NVV+++++A++ I QD IA + +E+GR++I+ V
Sbjct: 234 RKRGKVYESTEKYSVLRSLKAIERSNVVLIVINAEEGIIEQDKKIAGYAHEAGRAVIIVV 293
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+++ + + + + I+ + FLS+A F+SA + + ++N V ++ ++
Sbjct: 294 NKWDTVVKDDKTMQNFEQKIRDEFLFLSYAPVLFLSAKTKQRLQFVLPAVNKVAENHLLR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + ++ A+ +P K R ++ Y Q PP V N + + Y+R+L
Sbjct: 354 VQTHVLNDVIMDAVAMNPTPTDKGKRLRISYVTQVAVAPPTFVFFVNEPELMHFSYQRFL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|373471151|ref|ZP_09562222.1| ribosome biogenesis GTPase Der [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
gi|371760981|gb|EHO49633.1| ribosome biogenesis GTPase Der [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
Length = 449
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 256/423 (60%), Gaps = 13/423 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV ++GRPNVGKSTLFN + ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 9 KPVDAIIGRPNVGKSTLFNAIAGEPISIVKDTPGVTRDRIYADCTWLNMNFTLIDTGGIE 68
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+I+FI D RQGLV+ D + + LRKS +P+VL +NK
Sbjct: 69 PDSSDIILSQMREQAEIAIETADVIVFITDVRQGLVDSDSKVCDMLRKSRKPVVLAVNKV 128
Query: 122 ENINSSISLDFYE---LGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
+++ + D YE LGIG P +SA GI + LE + + FK K+ +
Sbjct: 129 DSM-AKFGNDVYEFLTLGIGEPIPVSAASRLGIGDLLEAVAS-------HFKNKDTEDEE 180
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ ++AIVGKPNVGKS++IN L G+NRVI D GTTRD+I ++ N ++Y+ IDTA
Sbjct: 181 DDDRPRIAIVGKPNVGKSSIINRLTGQNRVIVSDIAGTTRDAIDTVVVNNKQEYVFIDTA 240
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E IE++S+I+T+ ++ A+VV+L++DA + ++ QD IA ++ G+ +IV
Sbjct: 241 GLRRKSKVKEDIERYSIIRTVTAVDRADVVVLVIDASEGVTEQDAKIAGIAHDRGKGIIV 300
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD + + + I + +NIK+ L+F+ +A F FISA+ + E I+ V ++
Sbjct: 301 AVNKWDLVEKDNKTIYEYTDNIKRILSFMPYAEFVFISALSGQRLQKLFEMIDIVRENQT 360
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ + T + + A P K R K+ YA Q PP VI N + + Y+R
Sbjct: 361 LRIQTGVLNEIISEATVMQQPPSDKGKRLKIFYATQVAVKPPTFVIFVNIKQLMHFSYQR 420
Query: 417 YLE 419
YLE
Sbjct: 421 YLE 423
>gi|117926861|ref|YP_867478.1| small GTP-binding protein [Magnetococcus marinus MC-1]
gi|117610617|gb|ABK46072.1| small GTP-binding protein [Magnetococcus marinus MC-1]
Length = 495
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 168/436 (38%), Positives = 252/436 (57%), Gaps = 20/436 (4%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P++ LVGRPNVGKSTLFNRLT +RDALV + PGLTRDR YG G F ++DTGGFE
Sbjct: 17 PLVALVGRPNVGKSTLFNRLTRTRDALVDDTPGLTRDRQYGIMKRGDTPFPMVDTGGFEA 76
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ + ++ + QT AI E+DII+F+VDG G + D I + LR SG+P+++ NKSE
Sbjct: 77 DPGETMVSLIRGQTILAIEEADIIVFVVDGSTGPLTDDYAIASHLRSSGKPVIIAANKSE 136
Query: 123 NINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY 182
++ S++F+ELG+ IS+ +G GI + LE + + + F ++ E + +E
Sbjct: 137 KKAATASIEFHELGMEPIIPISSAHGLGIGDLLETLEEMTDAMEGFCRQPE-EQLLPLEV 195
Query: 183 ----------------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIK-SLF 225
+++A+VG PN GKS+L+N L+GE R++ + GTTRDSI +
Sbjct: 196 EQENPEVAREPRFKGPLRLAVVGCPNAGKSSLVNRLVGEERLLASEIAGTTRDSIDVPIT 255
Query: 226 EYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINI 285
+ N + IL+DTAGIRR+++ +EKF+VI LKS+ A V IL+LDAQ+ ++ QD I
Sbjct: 256 DANGETVILVDTAGIRRKSRVSLRVEKFAVIAALKSMERAEVAILVLDAQRGVTDQDKRI 315
Query: 286 ANFIYESGRSLIVCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINS 343
++ ++G LI VNKWD++ Q+ I + + L+ F+SA +
Sbjct: 316 GSYALDAGCGLIFAVNKWDTMPPGQQTIRSFQEGLAIHFPRLTHCPVIFLSAKSGKRVEK 375
Query: 344 FMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIH 403
+ + V ++ + +STS + R L AI+ P R K+RY Q +PP V
Sbjct: 376 LLPTARKVRQATQMRVSTSNLNRWLEQAIEKKAPPRAAGRPVKIRYCSQVSSSPPTFVFF 435
Query: 404 GNRLKYIGNDYKRYLE 419
NR + + YKRYLE
Sbjct: 436 CNRPEKMEESYKRYLE 451
>gi|307244110|ref|ZP_07526228.1| ribosome-associated GTPase EngA [Peptostreptococcus stomatis DSM
17678]
gi|306492481|gb|EFM64516.1| ribosome-associated GTPase EngA [Peptostreptococcus stomatis DSM
17678]
Length = 442
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 164/427 (38%), Positives = 261/427 (61%), Gaps = 23/427 (5%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+P++ +VGRPNVGKST+FN+LT ++ ++V + PG+TRDR +GE K F IIDTGG E
Sbjct: 6 RPIVAVVGRPNVGKSTIFNKLTGTKISIVEDTPGVTRDRIFGEVEWLNKYFTIIDTGGIE 65
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M Q A+ + +I+F+VDG+ GL DK + + LR++ +P++LV+NK
Sbjct: 66 PESDDIILSQMRNQAMLAVDMAHVILFVVDGKSGLTAADKEVADILRRTKKPVLLVVNKI 125
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++ + ++ DFYELG+GNP IS G+ + L+ ++ + F +
Sbjct: 126 DSKSQFDNVYDFYELGLGNPIAISGANSMGLGDLLDEVV------------ENFPEGMNT 173
Query: 181 EY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
EY I+VAI GKPN GKS+++N++LGE RVI GTTRD+I + FE ++ K++LID
Sbjct: 174 EYDEDVIRVAITGKPNAGKSSILNNILGEERVIVSPIAGTTRDAIDTYFEKDDNKFLLID 233
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAGIRRR+K +E +E+FSVI+++ ++ A+VV++++DA + ++ QD IA ++ G++
Sbjct: 234 TAGIRRRSKVYENVERFSVIRSMSAVDRADVVLIVIDATEGVTEQDTKIAGIAHDEGKAC 293
Query: 297 IVCVNKWDSIIHNQRKIIKN---NIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
I VNKWD +I K + N ++++K F+++A F+SA+ I +E++ V
Sbjct: 294 IFVVNKWD-LIEKDNKTMGNFRMSVREKFPFMTYAPILFVSAVSNQRIGKILETVVQVSA 352
Query: 354 SSIIHLSTSRITRALISAIK-NHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGN 412
++TS + + + AI N PP K R K+ Y Q G PP + N +
Sbjct: 353 EQNKRVTTSVLNQVIGEAIMLNQPPSDKGR-RLKIYYGTQTGVKPPTFNLFINDKELTHF 411
Query: 413 DYKRYLE 419
Y RYLE
Sbjct: 412 SYTRYLE 418
>gi|289423092|ref|ZP_06424907.1| ribosome-associated GTPase EngA [Peptostreptococcus anaerobius
653-L]
gi|289156423|gb|EFD05073.1| ribosome-associated GTPase EngA [Peptostreptococcus anaerobius
653-L]
Length = 439
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 260/426 (61%), Gaps = 21/426 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+P++ +VGRPNVGKSTLFN+LT ++ ++V + PG+TRDR +GE K F IIDTGG E
Sbjct: 4 RPIVAIVGRPNVGKSTLFNKLTGTKISIVEDTPGVTRDRIFGEVEWLNKYFTIIDTGGIE 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M Q A+ + +I+F+VDG+ GL D+ + + LRK+ +P++LV+NK
Sbjct: 64 PESDDIIISQMRNQAMLAVDMAHVILFVVDGKGGLTAADREVADILRKTNKPVLLVVNKI 123
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++ + ++ DFYELG+ P +S G+ + L+ I+ K F + +
Sbjct: 124 DSKSQWDNVYDFYELGLDVPFAVSGANAIGLGDLLDEIV------------KNFPDGLNT 171
Query: 181 EY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
EY IKVAI GKPN GKS+++N++LGE RVI GTTRD+I + FE + K++LID
Sbjct: 172 EYDEDVIKVAITGKPNAGKSSILNNILGEERVIVSPIAGTTRDAIDTYFEQGDNKFLLID 231
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAGIRRR+K +E +E+FSVI+++ ++ A+VV++++DA + ++ QD IA ++ G++
Sbjct: 232 TAGIRRRSKVYENVERFSVIRSMSAVDRADVVLIVIDATEGVTEQDTKIAGIAHDEGKAC 291
Query: 297 IVCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
I VNKWD + + + + K +I++K F+++A F+SA+ I +E++ +V
Sbjct: 292 IFVVNKWDLVEKDNKTMGNYKMSIREKFPFMAYAPIVFVSAVTNQRIAKILETVVYVSSE 351
Query: 355 SIIHLSTSRITRALISAIK-NHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
+STS + + + A+ N PP K R K+ Y Q G PP + N +
Sbjct: 352 QNKRVSTSVLNQVIAEAVMLNQPPSDKGR-RLKIYYGTQTGVKPPTFTLFINDKELTHFS 410
Query: 414 YKRYLE 419
Y RY+E
Sbjct: 411 YTRYIE 416
>gi|325681451|ref|ZP_08160977.1| ribosome biogenesis GTPase Der [Ruminococcus albus 8]
gi|324106941|gb|EGC01231.1| ribosome biogenesis GTPase Der [Ruminococcus albus 8]
Length = 443
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 253/423 (59%), Gaps = 16/423 (3%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
PV+ +VGRPNVGKSTLFN+L R ++V + PG+TRDR YG+ + F+++DTGG EP
Sbjct: 4 PVVAVVGRPNVGKSTLFNKLIGQRLSIVEDTPGVTRDRIYGKCEWLGREFMLVDTGGIEP 63
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
E I+ +M +Q++ AI +++II + D + G+ D + L KSG+P+VL +NK +
Sbjct: 64 ESDDIILSQMRRQSELAITSANVIILVTDIKSGVTSTDMEVAQMLMKSGKPVVLCVNKVD 123
Query: 123 NINSS-ISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
N+ + L +FY LG+G P +S+++G+G + L+ +L Y +E +
Sbjct: 124 NVGEPPMELYEFYNLGLGEPFPVSSVHGHGTGDMLDEVLK----YLPEISAEEDDD---- 175
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E +KVA++GKPNVGKS+LIN + GE RVI D GTTRD+ + E K++ IDTAGI
Sbjct: 176 EAVKVAVIGKPNVGKSSLINRICGEERVIVSDIAGTTRDATDTDIENEFGKFVFIDTAGI 235
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E +EK+SV++ ++ A+V ++++DA + QD +A + +E G++ +V V
Sbjct: 236 RRKSKVLETVEKYSVLRAYMAVDRADVAVIVIDATVGFTEQDSKVAGYAHEKGKACVVAV 295
Query: 301 NKWDSIIHNQRKIIKNNIKKKL----NFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
NKWD++ + + + N +KKL +F+S+ F F+SA ++ E I +V + +
Sbjct: 296 NKWDALEKDGKTM--NEFRKKLENDFSFMSYVPFVFVSAKTGLRVDKLFEMIRYVKEKNS 353
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ ++T ++ L A + P K R K+ Y Q NPP V NR + Y+R
Sbjct: 354 VRIATGKLNEVLAYATQRVQPPSDKGRRLKIYYMTQVSTNPPTFVFFVNRAELFHFSYQR 413
Query: 417 YLE 419
YLE
Sbjct: 414 YLE 416
>gi|424714812|ref|YP_007015527.1| GTPase Der [Listeria monocytogenes serotype 4b str. LL195]
gi|424013996|emb|CCO64536.1| GTPase Der [Listeria monocytogenes serotype 4b str. LL195]
Length = 446
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 261/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y K F IIDTGG +
Sbjct: 13 KPVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGID 72
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + ++ Q + AI E+D+IIFI +GR+G+ + D+ + L +S +PIVL INK
Sbjct: 73 LS-DEPFLEQIRAQAEIAIDEADVIIFITNGREGVTDADEQVAKILYRSNKPIVLAINKV 131
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G P+ IS +G G+ + L+ + + F K+E +
Sbjct: 132 DNPEMRDQIYDFYSLGFGEPYPISGSHGLGLGDMLDAV-------RAHFPKEEEEE-YPD 183
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ +K +++G+PNVGKS+++N+LLGE+RVI D GTTRD+I + + ++ + Y++IDTAG+
Sbjct: 184 DTVKFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM 243
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I ++VV+++++A++ I QD IA + +++GR++I+ V
Sbjct: 244 RKRGKVYESTEKYSVLRAMRAIERSDVVLVVINAEEGIREQDKRIAGYAHDAGRAIIIVV 303
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+I +++ I +I+++ FLS+A F+SA +N+ IN V D+ +
Sbjct: 304 NKWDAINKDEKTINVWTEDIREQFQFLSYAPIVFVSAKTKQRLNNLFPLINQVSDNHSLR 363
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + A+ +P K R K+ Y Q PP V+ N + + Y+R+L
Sbjct: 364 VQSSMLNDVISDAVAMNPSPMDKGKRLKIFYTTQVAVKPPTFVVFVNDPELMHFSYERFL 423
Query: 419 E 419
E
Sbjct: 424 E 424
>gi|86158079|ref|YP_464864.1| GTP-binding protein EngA [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774590|gb|ABC81427.1| small GTP-binding protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 465
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 244/431 (56%), Gaps = 14/431 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ LVGRPNVGKSTLFNRL R A+V + PG+TRDR+Y + ++ ++DTGGFE
Sbjct: 5 RPVVALVGRPNVGKSTLFNRLAGRRVAIVEDVPGVTRDRNYADVIWEGRAVSVVDTGGFE 64
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + +M ++ +Q + A+ E+ +++ +VDGR GL D+ + LR++G+P+ + +NK
Sbjct: 65 PESRDRLMSQVREQAQLAVDEASVVVLVVDGRDGLTSLDRAVAELLRRAGKPLFVAVNKV 124
Query: 122 ENINSSISL---DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
+ + + +FY LG G H +SA +G G+ ++ I+ +E
Sbjct: 125 DTARTEEDVPLAEFYGLGFGEVHALSAEHGRGVSGLVDAIVEKLALPPLPPAPEEADEPQ 184
Query: 179 SIEY-------IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKK 231
+ I++AIVG+PNVGKST +N+LLGE R + D PGTTRD+I SL + ++
Sbjct: 185 EVSEEARPVGDIRLAIVGRPNVGKSTFVNALLGEERFVVSDVPGTTRDAIDSLVAHKGRR 244
Query: 232 YILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYE 291
+++ DTAGIRR+ + +E FSV++ +K++ +A VV LLDA + QD + + E
Sbjct: 245 FVVTDTAGIRRKRSIAQKVESFSVVRAMKAMDQAEVVACLLDATEAGVEQDARLLGLVAE 304
Query: 292 SGRSLIVCVNKWDSIIHNQ---RKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
G++L++ VNKWD I + + + + K+L F++FA F+SA + ++ +E
Sbjct: 305 KGKALVIVVNKWD-IAEREGATQDWYRKELTKRLPFVAFAPMLFVSAKERRGVHRVLEKA 363
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ + T ++ L + HP + R KL Y Q PP VI N
Sbjct: 364 ARLVEQYRARFPTPQLNELLEALQDEHPAPVARGRRVKLYYVAQVAYAPPTFVIQANHPD 423
Query: 409 YIGNDYKRYLE 419
+ + Y+RY+E
Sbjct: 424 GLTDHYRRYIE 434
>gi|410453977|ref|ZP_11307920.1| GTP-binding protein Der [Bacillus bataviensis LMG 21833]
gi|409932657|gb|EKN69615.1| GTP-binding protein Der [Bacillus bataviensis LMG 21833]
Length = 436
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 262/426 (61%), Gaps = 20/426 (4%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG
Sbjct: 2 VKPVIAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYSSGEWLTHEFNIIDTGGI 61
Query: 61 ----EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVL 116
EP + ++ +Q + AI E+D+IIF+ +GR+G+ D+ + L KS +PIVL
Sbjct: 62 DIGDEP-----FLEQIRQQAEVAIDEADVIIFLTNGREGVTAADEEVAKILYKSKKPIVL 116
Query: 117 VINKSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFT 175
+NK +N + DFY LG G P IS +G G+ + L+ K F K K+
Sbjct: 117 GVNKIDNPEMREQIYDFYALGFGEPIPISGSHGLGLGDLLDEAA------KHFPKNKQLD 170
Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
+ + +K +++G+PNVGKS+L+N++LGE+RVI D GTTRD++ S + YN KY++I
Sbjct: 171 --YDDDVVKFSLIGRPNVGKSSLVNAILGEDRVIVSDIAGTTRDAVDSPYTYNGDKYVII 228
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAGIR++ K +E EK+SV++ L++I ++VV+++++A++ I QD IA + +E+GR+
Sbjct: 229 DTAGIRKKGKVYETTEKYSVLRALRAIERSDVVLVVINAEEGIIEQDKKIAGYAHEAGRA 288
Query: 296 LIVCVNKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
+++ VNKWD+I +++ K ++ I++ FLS+A F+SA I++ + IN +
Sbjct: 289 VVIVVNKWDAIEKDEKTMKELEQKIREHFLFLSYAPIVFLSAKTKKRIHTLLPMINTASE 348
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
+ + + TS + ++ AI +P K R K+ YA Q PP V+ N + +
Sbjct: 349 NHSMRVETSVLNDVIMDAIAMNPAPTDKGKRLKIYYATQVAIKPPTFVVFVNEPELMHFS 408
Query: 414 YKRYLE 419
Y+R+LE
Sbjct: 409 YERFLE 414
>gi|392940711|ref|ZP_10306355.1| LOW QUALITY PROTEIN: ribosome-associated GTPase EngA
[Thermoanaerobacter siderophilus SR4]
gi|392292461|gb|EIW00905.1| LOW QUALITY PROTEIN: ribosome-associated GTPase EngA
[Thermoanaerobacter siderophilus SR4]
Length = 439
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 258/417 (61%), Gaps = 13/417 (3%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKK 66
+VGRPNVGKSTLFN++ R ++V + PG+TRDR YG K FI++DTGG +P +
Sbjct: 8 IVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRVYGNAEWLDKKFILVDTGGLDPNAED 67
Query: 67 GIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINS 126
+ ++ Q + AI SD+I+F+VD ++GL+ +D+ I N LR++ + ++LV NK ++
Sbjct: 68 ILFSKVRLQVEAAIDASDVILFLVDAKEGLMPEDEEIANILRRAKKEVILVCNKVDSFKE 127
Query: 127 --SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIK 184
DF+ LG+GNP ISA G GI L+ ++ +LP ++ E+T E IK
Sbjct: 128 MPPTYYDFFSLGLGNPIPISASNGLGIGELLDEVVK-KLPQEEL----EYTE----ETIK 178
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
+A++GKPNVGKS+L+N +LGE RVI + PGTTRD+I + F + K Y+LIDTAGIRR++
Sbjct: 179 IAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRKS 238
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ E IE++SV++ L +I +++ +L++DA + + QD IA + +E+G+ +I+ VNKWD
Sbjct: 239 RISESIERYSVLRALAAIERSDICLLMIDATEGPTEQDTKIAGYAFENGKGIIIVVNKWD 298
Query: 305 SIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTS 362
+I + + +++KL+F+SFA FISA ++ +E+++ V++ ++T
Sbjct: 299 AIKKDNNTVNEYTKMVREKLSFISFAPILFISAKTGQRVHRVLETVDKVWEEYNKRITTG 358
Query: 363 RITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+ L A+ PP K K+ Y Q G PP V+ N + + Y R++E
Sbjct: 359 LLNNVLNEAMLMFPPPADKGKPLKVYYTSQVGIKPPSFVVFVNEPELMHFSYLRFIE 415
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V+IVG+PNVGKSTL N ++G+ I D PG TRD + E+ +KK+IL+DT G+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRVYGNAEWLDKKFILVDTGGLDPNA 65
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ +++ ++ +I ++V++ L+DA++ + +D IAN + + + +I+ NK D
Sbjct: 66 E--DILFSKVRLQVEAAIDASDVILFLVDAKEGLMPEDEEIANILRRAKKEVILVCNKVD 123
Query: 305 S 305
S
Sbjct: 124 S 124
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF--EP 62
+ ++G+PNVGKS+L N++ +V+N PG TRD K++++IDT G +
Sbjct: 179 IAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRKS 238
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ + I + AI SDI + ++D +G EQD I + ++G+ I++V+NK +
Sbjct: 239 RISESIERYSVLRALAAIERSDICLLMIDATEGPTEQDTKIAGYAFENGKGIIIVVNKWD 298
Query: 123 NI 124
I
Sbjct: 299 AI 300
>gi|167040606|ref|YP_001663591.1| GTP-binding protein EngA [Thermoanaerobacter sp. X514]
gi|300914647|ref|ZP_07131963.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X561]
gi|307724119|ref|YP_003903870.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X513]
gi|238687595|sp|B0K3E4.1|DER_THEPX RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166854846|gb|ABY93255.1| small GTP-binding protein [Thermoanaerobacter sp. X514]
gi|300889582|gb|EFK84728.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X561]
gi|307581180|gb|ADN54579.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X513]
Length = 439
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 257/417 (61%), Gaps = 13/417 (3%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKK 66
+VGRPNVGKSTLFN++ R ++V + PG+TRDR YG K FI++DTGG +P +
Sbjct: 8 IVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGLDPNAED 67
Query: 67 GIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINS 126
+ ++ Q + AI SD+I+F+VD ++GL+ +D+ I N LR++ + ++LV NK ++
Sbjct: 68 ILFSKVRLQVEAAIDTSDVILFLVDAKEGLMPEDEEIANILRRAKKEVILVCNKVDSFKE 127
Query: 127 --SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIK 184
DF+ LG+GNP ISA G GI L+ ++ LP ++ E+T E IK
Sbjct: 128 MPPTYYDFFSLGLGNPIPISASNGLGIGELLDEVVK-RLPQEEL----EYTE----ETIK 178
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
+A++GKPNVGKS+L+N +LGE RVI + PGTTRD+I + F + K Y+LIDTAGIRR++
Sbjct: 179 IAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRKS 238
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ E IE++SV++ L +I +++ +L++DA + + QD IA + +E+G+ +I+ VNKWD
Sbjct: 239 RISESIERYSVLRALAAIERSDICLLMIDATEGPTEQDTKIAGYAFENGKGIIIVVNKWD 298
Query: 305 SIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTS 362
+I + + +++KL+F+SFA FISA ++ +E+++ V++ ++T
Sbjct: 299 AIKKDNNTVNEYTKMVREKLSFISFAPILFISAKTGQRVHRVLETVDKVWEEYNKRITTG 358
Query: 363 RITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+ L AI PP K K+ Y Q G PP V+ N + + Y R++E
Sbjct: 359 LLNNVLNEAILMFPPPADKGKPLKVYYTSQVGIKPPSFVVFVNEPELMHFSYLRFIE 415
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V+IVG+PNVGKSTL N ++G+ I D PG TRD I E+ +KK+IL+DT G+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGLDPNA 65
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ +++ ++ +I ++V++ L+DA++ + +D IAN + + + +I+ NK D
Sbjct: 66 E--DILFSKVRLQVEAAIDTSDVILFLVDAKEGLMPEDEEIANILRRAKKEVILVCNKVD 123
Query: 305 S 305
S
Sbjct: 124 S 124
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF--EP 62
+ ++G+PNVGKS+L N++ +V+N PG TRD K++++IDT G +
Sbjct: 179 IAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRKS 238
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ + I + AI SDI + ++D +G EQD I + ++G+ I++V+NK +
Sbjct: 239 RISESIERYSVLRALAAIERSDICLLMIDATEGPTEQDTKIAGYAFENGKGIIIVVNKWD 298
Query: 123 NI 124
I
Sbjct: 299 AI 300
>gi|297584434|ref|YP_003700214.1| ribosome-associated GTPase EngA [Bacillus selenitireducens MLS10]
gi|297142891|gb|ADH99648.1| ribosome-associated GTPase EngA [Bacillus selenitireducens MLS10]
Length = 446
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 154/423 (36%), Positives = 258/423 (60%), Gaps = 13/423 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+KPVL +VGRPNVGKSTLFNR+ R ++V + PG+TRDR Y F IIDTGG
Sbjct: 10 VKPVLAIVGRPNVGKSTLFNRVVGERISIVEDKPGVTRDRIYSSAEWLTHEFFIIDTGGI 69
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + ++ +M Q + AI E+D+I F+V+GR G+ D+ + L +S +PIVL +NK
Sbjct: 70 EIS-DEPLLEQMRYQAELAIDEADVICFVVNGRDGMTAADEEVAQILHRSKKPIVLAVNK 128
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + L +FY LG+G+PH +S +G G+ + L+ F + + + H
Sbjct: 129 IDDPSMFERLYEFYSLGVGDPHPVSGTHGLGLGDLLDTAAA-------SFPQNQGDDYHP 181
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++++++G+PNVGKS+++N++LGE RVI D GTTRD+I + F + K Y++IDTAG
Sbjct: 182 -DTVRMSLIGRPNVGKSSMVNAILGEERVIVSDIAGTTRDAIDTSFTKDGKDYVVIDTAG 240
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R+R K +E EK+SV++ LK+I ++VV+++LD ++ I QD IA + +E+GR++++
Sbjct: 241 MRKRGKVYETTEKYSVLRALKAIERSDVVLVVLDGEEGIIEQDKKIAGYAHEAGRAIVIV 300
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ + + + K I+ + FL +A ++SA+ + + + +N V +S +
Sbjct: 301 VNKWDAVEKDDKTMQKFEEKIRHEFVFLDYAPIVYVSALTKRRMQTLLPVVNEVSESHNM 360
Query: 358 HLSTSRITRALISAIKNHP-PCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ T + ++ A+ +P P R ++ YA Q PP V+ N + + Y+R
Sbjct: 361 RVQTHVLNDVIVDAVTMNPTPTDHGGERLRINYATQVSVQPPTFVLFVNDPELLHFSYRR 420
Query: 417 YLE 419
YLE
Sbjct: 421 YLE 423
>gi|148380476|ref|YP_001255017.1| GTP-binding protein EngA [Clostridium botulinum A str. ATCC 3502]
gi|153932865|ref|YP_001384700.1| GTP-binding protein EngA [Clostridium botulinum A str. ATCC 19397]
gi|153936714|ref|YP_001388221.1| GTP-binding protein EngA [Clostridium botulinum A str. Hall]
gi|166224327|sp|A7FW89.1|DER_CLOB1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166224328|sp|A5I4V0.1|DER_CLOBH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|148289960|emb|CAL84073.1| putative GTP-binding protein EngA [Clostridium botulinum A str.
ATCC 3502]
gi|152928909|gb|ABS34409.1| GTP-binding protein [Clostridium botulinum A str. ATCC 19397]
gi|152932628|gb|ABS38127.1| ribosome-associated GTPase EngA [Clostridium botulinum A str. Hall]
Length = 439
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 252/421 (59%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y E F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRISIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ + I+ +M +Q + AI +++IIF+VDG++GL DK + LRKS +P+VLV+NK
Sbjct: 63 PKSEDIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADKEVAQMLRKSKKPVVLVVNKI 122
Query: 122 ENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ + + + + +FY LGIG+P IS+ G+ + L+ ++ ++FK E
Sbjct: 123 DKLKDENNAYEFYNLGIGDPVTISSSQALGLGDMLDRVV-------EYFKDDESAG-EDD 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E I +A +GKPNVGKS+LIN LLGE R+I D PGTTRDSI S + + ++ LIDTAG+
Sbjct: 175 ERINIAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTDFGEFTLIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SVI+T SI A+V IL++DA + IS QD I + ++ ++++V V
Sbjct: 235 RRKSKVKEEIERYSVIRTYASIERADVCILMIDATEGISEQDQKIIGYAHDINKAILVIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K +K L+F+ +A + FISA + +++ YD+
Sbjct: 295 NKWDLVEKDDKTMDKFKKELKVNLSFMPYAKYLFISAKTGQRVVKVLQTAKECYDNYNKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + AI P R K+ Y Q G PP + N I Y+RYL
Sbjct: 355 VKTGVLNDVISQAIMMKEPPIVGTKRLKIYYVTQIGTKPPTFIFFVNDPACIHFSYQRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|319892465|ref|YP_004149340.1| GTP-binding protein EngA [Staphylococcus pseudintermedius HKU10-03]
gi|386319261|ref|YP_006015424.1| GTP-binding protein EngA [Staphylococcus pseudintermedius ED99]
gi|317162161|gb|ADV05704.1| GTP-binding protein EngA [Staphylococcus pseudintermedius HKU10-03]
gi|323464432|gb|ADX76585.1| GTP-binding protein EngA [Staphylococcus pseudintermedius ED99]
Length = 436
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 160/421 (38%), Positives = 256/421 (60%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNVIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+G+ + D+L+ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGVTQNDELVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + + DFY LG G P +S +G G+ + LE + K FKK + ++ +
Sbjct: 122 DNPDMRNDIYDFYSLGFGEPFPLSGSHGLGLGDLLEEV-------AKHFKK-DTSDPYDD 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+++++G+PNVGKS+LIN++LGE RVI + GTTRD+I +++ Y + Y+LIDTAG+
Sbjct: 174 DTIRLSLIGRPNVGKSSLINAILGEERVIVSNIAGTTRDAIDTVYSYEGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV+++LDA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVLDAEQGIIEQDKRVAGYAHEEGKAIVIVV 293
Query: 301 NKWDSI--IHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ N K + ++K FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTLEKDSNTMKKFMDEVRKNFQFLDYAQIAFVSAKEKMRLRTLFPLINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP V+ N ++ + YKRYL
Sbjct: 354 VQSSTLNEVITDAIAMNPTPTDKGRRLNIFYATQVAIEPPTFVVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|345017911|ref|YP_004820264.1| GTP-binding protein engA [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033254|gb|AEM78980.1| GTP-binding protein engA [Thermoanaerobacter wiegelii Rt8.B1]
Length = 439
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 258/417 (61%), Gaps = 13/417 (3%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKK 66
+VGRPNVGKSTLFN++ R ++V + PG+TRDR YG K FI++DTGG +P +
Sbjct: 8 IVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGLDPNAED 67
Query: 67 GIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINS 126
+ ++ Q + AI SD+I+F+VD ++GL+ +D+ I N LR++ + ++LV NK ++
Sbjct: 68 ILFSKVRLQVEAAIDASDVILFLVDAKEGLMPEDEEIANILRRAKKEVILVCNKVDSFKE 127
Query: 127 --SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIK 184
DF+ LG+GNP ISA G GI L+ ++ +LP ++ E+T E IK
Sbjct: 128 MPPTYYDFFSLGLGNPIPISASNGLGIGELLDEVVK-KLPQEEL----EYTE----ETIK 178
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
+A++GKPNVGKS+L+N +LGE RVI + PGTTRD+I + F + K Y+LIDTAGIRR++
Sbjct: 179 IAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRKS 238
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ E IE++SV++ L +I +++ +L++DA + + QD IA + +E+G+ +I+ VNKWD
Sbjct: 239 RISESIERYSVLRALAAIERSDICLLMIDATEGPTEQDTKIAGYAFENGKGIIIVVNKWD 298
Query: 305 SIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTS 362
+I + + +++KL+F+SFA FISA ++ +E+++ V++ ++T
Sbjct: 299 AIKKDNNTVNEYTKMVREKLSFISFAPILFISAKTGQRVHRVLETVDKVWEEYNKRITTG 358
Query: 363 RITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+ L A+ PP K K+ Y Q G PP V+ N + + Y R++E
Sbjct: 359 LLNNVLNEAMLMFPPPADKGKPLKVYYTSQVGIKPPSFVVFVNEPELMHFSYLRFIE 415
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V+IVG+PNVGKSTL N ++G+ I D PG TRD I E+ +KK+IL+DT G+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGLDPNA 65
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ +++ ++ +I ++V++ L+DA++ + +D IAN + + + +I+ NK D
Sbjct: 66 E--DILFSKVRLQVEAAIDASDVILFLVDAKEGLMPEDEEIANILRRAKKEVILVCNKVD 123
Query: 305 S 305
S
Sbjct: 124 S 124
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF--EP 62
+ ++G+PNVGKS+L N++ +V+N PG TRD K++++IDT G +
Sbjct: 179 IAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRKS 238
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ + I + AI SDI + ++D +G EQD I + ++G+ I++V+NK +
Sbjct: 239 RISESIERYSVLRALAAIERSDICLLMIDATEGPTEQDTKIAGYAFENGKGIIIVVNKWD 298
Query: 123 NI 124
I
Sbjct: 299 AI 300
>gi|295094896|emb|CBK83987.1| ribosome-associated GTPase EngA [Coprococcus sp. ART55/1]
Length = 440
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 253/422 (59%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN L + ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNVLAGEKISIVQDTPGVTRDRIYADINWLDYNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ M +Q + AI +D+I+F+ D RQG+V+ D + + LR+S +PIVLV+NK
Sbjct: 63 PESDNIILKSMREQAEIAIETADVILFMTDVRQGMVDDDAKVADMLRRSKKPIVLVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LG+G+PH IS GI + L+ +++ F + +
Sbjct: 123 DSFEKFMPDVYEFYNLGLGDPHPISGSSRLGIGDMLDEVVS-------HFNESAKDDTED 175
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++AI+GKPNVGKS++IN LLGE+RVI D GTTRD++ + N ++Y+ IDTAG
Sbjct: 176 -ERPRIAIIGKPNVGKSSIINKLLGEDRVIVSDIAGTTRDAVDTEIVRNGREYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E IE++S+I+T+ ++ NV +L++DA + I+ QD IA ++ G+ +I+
Sbjct: 235 LRRKSKIKEDIERYSIIRTVSAVERCNVAVLVIDATEGITDQDAKIAGIAHDRGKGMIIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I K I+ KL+++ +A FISA + E+I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTIYKFTEEIRNKLSYMPYAELLFISAQTGQRLPKLFETIDAVIENHSL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RIATGVLNEIMSEAVAMQQPPSDKGKRLKLYYITQVSVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
+E
Sbjct: 415 IE 416
>gi|229918701|ref|YP_002887347.1| GTP-binding protein EngA [Exiguobacterium sp. AT1b]
gi|229470130|gb|ACQ71902.1| small GTP-binding protein [Exiguobacterium sp. AT1b]
Length = 436
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 260/420 (61%), Gaps = 12/420 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
PV+ +VGRPN+GKST+FNR+ R ++V + PG+TRDR YG G + F +IDTGG E
Sbjct: 4 PVVAIVGRPNIGKSTIFNRIIGDRVSIVDDKPGVTRDRIYGTGEWLNRKFHLIDTGGIEV 63
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ ++ +M Q + AI E+D+IIF+V+GR+G+ D+ + N L +S +PIVL +NK +
Sbjct: 64 G-DEPLLVQMRHQAELAIDEADVIIFMVNGREGITAADEEVANLLFRSNKPIVLAVNKVD 122
Query: 123 NIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
N + +FY LG G+P IS +G G+ + L+ + + P K ++ E +
Sbjct: 123 NFEMRDLMYEFYSLGFGDPFPISGTHGLGLGDLLDQVFELA-PEKDEYEYNE-------D 174
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
I+ +++G+PNVGKS+L NS+LGE RVI + GTTRD+I + F + ++Y++IDTAG+R
Sbjct: 175 VIQFSLIGRPNVGKSSLTNSILGEERVIVSNIAGTTRDAIDTPFTRDGQEYVIIDTAGMR 234
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
+R K +E E++SV++ K+I +NVV+++LD ++ I QD +A +E+G+++++ VN
Sbjct: 235 KRGKVYESTERYSVMRAQKAIERSNVVLVVLDGEEGIIEQDKRVAGLAHEAGKAIVIVVN 294
Query: 302 KWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD++ + + K ++ I+++ FL +A F+SA+ + + + I V ++ +
Sbjct: 295 KWDAVEKDDKTMKKMEEKIRQEFLFLDYAPVVFLSALTSKRLQTLLPVIKQVAETHRRRI 354
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
STS + ++ A+ +P K R K+ YA Q PP V+ N + + YKRYLE
Sbjct: 355 STSVLNDVIVDAVAMNPTPTDKGQRLKINYATQVAIEPPTFVLFVNDPELLHFSYKRYLE 414
>gi|289435286|ref|YP_003465158.1| GTPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|422419559|ref|ZP_16496514.1| ribosome-associated GTPase EngA [Listeria seeligeri FSL N1-067]
gi|422422654|ref|ZP_16499607.1| ribosome-associated GTPase EngA [Listeria seeligeri FSL S4-171]
gi|289171530|emb|CBH28074.1| GTPase family protein [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313632616|gb|EFR99602.1| ribosome-associated GTPase EngA [Listeria seeligeri FSL N1-067]
gi|313637164|gb|EFS02696.1| ribosome-associated GTPase EngA [Listeria seeligeri FSL S4-171]
Length = 436
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 261/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y K F IIDTGG +
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKDFNIIDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + ++ Q + AI E+D+IIFI +GR+G+ + D+ + L +S +PIVL INK
Sbjct: 63 LS-DEPFLEQIRAQAEIAIDEADVIIFITNGREGVTDADEQVAKILYRSNKPIVLAINKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G P+ IS +G G+ + L+ + + F K+E +
Sbjct: 122 DNPEMRDQIYDFYSLGFGEPYPISGSHGLGLGDMLDAV-------RAHFPKEEEEE-YPD 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ +K +++G+PNVGKS+++N+LLGE+RVI D GTTRD+I + + ++ + Y++IDTAG+
Sbjct: 174 DTVKFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I ++VV+++++A++ I QD IA + +++GR++I+ V
Sbjct: 234 RKRGKVYESTEKYSVLRAMRAIERSDVVLVVINAEEGIREQDKRIAGYAHDAGRAMIIVV 293
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+I +++ I +I+++ FLS+A F+SA +N+ IN V D+ +
Sbjct: 294 NKWDAINKDEKTINVWTEDIREQFQFLSYAPIVFVSAKTKQRLNNLFPLINQVSDNHSLR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + A+ +P + R K+ Y Q PP V+ N + + Y+R+L
Sbjct: 354 VQSSMLNDVISDAVAMNPSPMDRGKRLKIFYTTQVAVKPPTFVVFVNDPELMHFSYERFL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|160892719|ref|ZP_02073509.1| hypothetical protein CLOL250_00249 [Clostridium sp. L2-50]
gi|156865760|gb|EDO59191.1| ribosome biogenesis GTPase Der [Clostridium sp. L2-50]
Length = 440
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 252/422 (59%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN L + ++V + PG+TRDR Y + +F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYADVSWLDYNFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ M +Q + AI +D+IIF+ D RQGLV+ D + LRKS +P++LV+NK
Sbjct: 63 PESDNIILKSMREQAEIAIETADVIIFMTDVRQGLVDDDHKVVQMLRKSKKPVILVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ +FY LG+G+P IS GI + L+ +++ ++ N
Sbjct: 123 DSFEKYMNDVYEFYNLGLGDPVPISGASRLGIGDMLDEVVS--------HFDEDSKNEEE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AI+GKPNVGKS++IN LLGENRVI D GTTRD+I + N +Y+ IDTAG
Sbjct: 175 DDRPRIAIIGKPNVGKSSIINKLLGENRVIVSDIAGTTRDAIDTEIVRNGTEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E IE++S+I+T+ ++ NV +L++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKSKIKEDIERYSIIRTVSAVERCNVAVLVIDATEGVTDQDAKIAGIAHERGKGMIIV 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ + + I K I++KL+++ +A F+SA + E+I+ V ++ +
Sbjct: 295 VNKWDAVEKDDKTIYKFTKEIREKLSYMPYAELLFVSAATGQRLPKLFETIDAVIENHSL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R KL Y Q PP VI N + + Y RY
Sbjct: 355 RVATGVLNEIMTEAVAMQQPPTDKGKRLKLFYITQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
+E
Sbjct: 415 IE 416
>gi|16803976|ref|NP_465461.1| GTP-binding protein EngA [Listeria monocytogenes EGD-e]
gi|46908170|ref|YP_014559.1| GTP-binding protein EngA [Listeria monocytogenes serotype 4b str.
F2365]
gi|217963911|ref|YP_002349589.1| GTP-binding protein EngA [Listeria monocytogenes HCC23]
gi|226224541|ref|YP_002758648.1| hypothetical protein Lm4b_01954 [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|254825568|ref|ZP_05230569.1| GTPase [Listeria monocytogenes FSL J1-194]
gi|254827178|ref|ZP_05231865.1| GTPase [Listeria monocytogenes FSL N3-165]
gi|254912495|ref|ZP_05262507.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254931892|ref|ZP_05265251.1| GTPase [Listeria monocytogenes HPB2262]
gi|254936822|ref|ZP_05268519.1| GTPase [Listeria monocytogenes F6900]
gi|254993214|ref|ZP_05275404.1| GTP-binding protein EngA [Listeria monocytogenes FSL J2-064]
gi|255028956|ref|ZP_05300907.1| GTP-binding protein EngA [Listeria monocytogenes LO28]
gi|284802382|ref|YP_003414247.1| GTP-binding protein EngA [Listeria monocytogenes 08-5578]
gi|284995524|ref|YP_003417292.1| GTP-binding protein EngA [Listeria monocytogenes 08-5923]
gi|290892097|ref|ZP_06555093.1| GTPase [Listeria monocytogenes FSL J2-071]
gi|300763753|ref|ZP_07073750.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|386008709|ref|YP_005926987.1| GTPase family protein [Listeria monocytogenes L99]
gi|386027317|ref|YP_005948093.1| GTP-binding protein EngA [Listeria monocytogenes M7]
gi|386044245|ref|YP_005963050.1| ribosome-associated GTPase EngA [Listeria monocytogenes 10403S]
gi|386047589|ref|YP_005965921.1| ribosome-associated GTPase EngA [Listeria monocytogenes J0161]
gi|386050913|ref|YP_005968904.1| GTPase [Listeria monocytogenes FSL R2-561]
gi|386054192|ref|YP_005971750.1| ribosome-associated GTPase EngA [Listeria monocytogenes Finland
1998]
gi|386732678|ref|YP_006206174.1| GTP-binding protein Der [Listeria monocytogenes 07PF0776]
gi|404281549|ref|YP_006682447.1| GTPase family protein [Listeria monocytogenes SLCC2755]
gi|404284434|ref|YP_006685331.1| GTPase family protein [Listeria monocytogenes SLCC2372]
gi|404287365|ref|YP_006693951.1| GTPase family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404408382|ref|YP_006691097.1| GTPase family protein [Listeria monocytogenes SLCC2376]
gi|404411238|ref|YP_006696826.1| GTPase family protein [Listeria monocytogenes SLCC5850]
gi|404414016|ref|YP_006699603.1| GTPase family protein [Listeria monocytogenes SLCC7179]
gi|405750290|ref|YP_006673756.1| GTPase family protein [Listeria monocytogenes ATCC 19117]
gi|405753164|ref|YP_006676629.1| GTPase family protein [Listeria monocytogenes SLCC2378]
gi|405756097|ref|YP_006679561.1| GTPase family protein [Listeria monocytogenes SLCC2540]
gi|405758988|ref|YP_006688264.1| GTPase family protein [Listeria monocytogenes SLCC2479]
gi|406704722|ref|YP_006755076.1| GTPase family protein [Listeria monocytogenes L312]
gi|417315581|ref|ZP_12102257.1| GTP-binding protein Der [Listeria monocytogenes J1816]
gi|417318019|ref|ZP_12104617.1| GTP-binding protein Der [Listeria monocytogenes J1-220]
gi|422410193|ref|ZP_16487154.1| ribosome-associated GTPase EngA [Listeria monocytogenes FSL F2-208]
gi|422810020|ref|ZP_16858431.1| GTP-binding protein EngA [Listeria monocytogenes FSL J1-208]
gi|424823697|ref|ZP_18248710.1| GTPase Der [Listeria monocytogenes str. Scott A]
gi|26006722|sp|Q8Y5W8.1|DER_LISMO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|67460310|sp|Q71Y78.1|DER_LISMF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783158|sp|B8DBY9.1|DER_LISMH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|259645882|sp|C1KWN7.1|DER_LISMC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|16411390|emb|CAD00015.1| lmo1937 [Listeria monocytogenes EGD-e]
gi|46881440|gb|AAT04736.1| GTPase family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|217333181|gb|ACK38975.1| GTP-binding protein EngA [Listeria monocytogenes HCC23]
gi|225877003|emb|CAS05712.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258599561|gb|EEW12886.1| GTPase [Listeria monocytogenes FSL N3-165]
gi|258609417|gb|EEW22025.1| GTPase [Listeria monocytogenes F6900]
gi|284057944|gb|ADB68885.1| GTP-binding protein EngA [Listeria monocytogenes 08-5578]
gi|284060991|gb|ADB71930.1| GTP-binding protein EngA [Listeria monocytogenes 08-5923]
gi|290558220|gb|EFD91738.1| GTPase [Listeria monocytogenes FSL J2-071]
gi|293583444|gb|EFF95476.1| GTPase [Listeria monocytogenes HPB2262]
gi|293590479|gb|EFF98813.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|293594811|gb|EFG02572.1| GTPase [Listeria monocytogenes FSL J1-194]
gi|300515489|gb|EFK42539.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|307571519|emb|CAR84698.1| GTPase family protein [Listeria monocytogenes L99]
gi|313607930|gb|EFR84070.1| ribosome-associated GTPase EngA [Listeria monocytogenes FSL F2-208]
gi|328466285|gb|EGF37442.1| GTP-binding protein Der [Listeria monocytogenes J1816]
gi|328472780|gb|EGF43629.1| GTP-binding protein Der [Listeria monocytogenes J1-220]
gi|332312377|gb|EGJ25472.1| GTPase Der [Listeria monocytogenes str. Scott A]
gi|336023898|gb|AEH93035.1| GTP-binding protein EngA [Listeria monocytogenes M7]
gi|345534580|gb|AEO04021.1| ribosome-associated GTPase EngA [Listeria monocytogenes J0161]
gi|345537479|gb|AEO06919.1| ribosome-associated GTPase EngA [Listeria monocytogenes 10403S]
gi|346424759|gb|AEO26284.1| GTPase [Listeria monocytogenes FSL R2-561]
gi|346646843|gb|AEO39468.1| ribosome-associated GTPase EngA [Listeria monocytogenes Finland
1998]
gi|378751684|gb|EHY62272.1| GTP-binding protein EngA [Listeria monocytogenes FSL J1-208]
gi|384391436|gb|AFH80506.1| GTP-binding protein Der [Listeria monocytogenes 07PF0776]
gi|404219490|emb|CBY70854.1| GTPase family protein [Listeria monocytogenes ATCC 19117]
gi|404222364|emb|CBY73727.1| GTPase family protein [Listeria monocytogenes SLCC2378]
gi|404225297|emb|CBY76659.1| GTPase family protein [Listeria monocytogenes SLCC2540]
gi|404228184|emb|CBY49589.1| GTPase family protein [Listeria monocytogenes SLCC2755]
gi|404231064|emb|CBY52468.1| GTPase family protein [Listeria monocytogenes SLCC5850]
gi|404233936|emb|CBY55339.1| GTPase family protein [Listeria monocytogenes SLCC2372]
gi|404236870|emb|CBY58272.1| GTPase family protein [Listeria monocytogenes SLCC2479]
gi|404239715|emb|CBY61116.1| GTPase family protein [Listeria monocytogenes SLCC7179]
gi|404242531|emb|CBY63931.1| GTPase family protein [Listeria monocytogenes SLCC2376]
gi|404246294|emb|CBY04519.1| GTPase family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361752|emb|CBY68025.1| GTPase family protein [Listeria monocytogenes L312]
Length = 436
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 261/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y K F IIDTGG +
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + ++ Q + AI E+D+IIFI +GR+G+ + D+ + L +S +PIVL INK
Sbjct: 63 LS-DEPFLEQIRAQAEIAIDEADVIIFITNGREGVTDADEQVAKILYRSNKPIVLAINKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G P+ IS +G G+ + L+ + + F K+E +
Sbjct: 122 DNPEMRDQIYDFYSLGFGEPYPISGSHGLGLGDMLDAV-------RAHFPKEEEEE-YPD 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ +K +++G+PNVGKS+++N+LLGE+RVI D GTTRD+I + + ++ + Y++IDTAG+
Sbjct: 174 DTVKFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I ++VV+++++A++ I QD IA + +++GR++I+ V
Sbjct: 234 RKRGKVYESTEKYSVLRAMRAIERSDVVLVVINAEEGIREQDKRIAGYAHDAGRAIIIVV 293
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+I +++ I +I+++ FLS+A F+SA +N+ IN V D+ +
Sbjct: 294 NKWDAINKDEKTINVWTEDIREQFQFLSYAPIVFVSAKTKQRLNNLFPLINQVSDNHSLR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + A+ +P K R K+ Y Q PP V+ N + + Y+R+L
Sbjct: 354 VQSSMLNDVISDAVAMNPSPMDKGKRLKIFYTTQVAVKPPTFVVFVNDPELMHFSYERFL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|332652769|ref|ZP_08418514.1| ribosome-associated GTPase EngA [Ruminococcaceae bacterium D16]
gi|332517915|gb|EGJ47518.1| ribosome-associated GTPase EngA [Ruminococcaceae bacterium D16]
Length = 441
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 254/424 (59%), Gaps = 14/424 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M+P++ +VGRPNVGKS LFN+L R ++V + PG+TRDR Y + ++F I+DTGG
Sbjct: 1 MRPLVAIVGRPNVGKSMLFNKLCGQRLSIVEDTPGVTRDRLYAQCEWRNRTFDIVDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
EP I+ M +Q + AI + +I+F+ D + G+ D+ + N L +SG+P+VL +NK
Sbjct: 61 EPGTDDQILSFMREQAEIAISTATVIVFVCDVKTGMTASDQEVANMLLRSGKPVVLAVNK 120
Query: 121 SENI---NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
++ + N + +FY LG+G+P +SA++G+G + L+ P
Sbjct: 121 ADQVGRENPDV-YEFYNLGLGDPIAVSAVHGHGTGDLLDACFEYFPPDD--------EEE 171
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ IKVAI+GKPNVGKS+L+N +LG+ RVI + GTTRD++ S+FE K++ IDT
Sbjct: 172 EDDDTIKVAIIGKPNVGKSSLVNRILGQERVIVSNMAGTTRDAVDSVFENEKGKFLFIDT 231
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+R+++K + IEKFSV++ +I ++V ++L+DAQ+ ++ QD +A +E+G++ I
Sbjct: 232 AGMRKKSKVDDRIEKFSVLRATMAIERSDVCLILIDAQEGVTEQDTKVAGLAHEAGKACI 291
Query: 298 VCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD+I + + + ++ ++ + L+++++A FISA+ ++ + I +V + S
Sbjct: 292 IVVNKWDAIEKDGKTMDKMRKDVMRDLSYMTYAPIIFISALTGQRVDRLFDLITYVNNQS 351
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ ++T + L A P K R K+ Y Q G PP V N + Y+
Sbjct: 352 AMRITTGMLNSVLADATARVQPPTDKGRRLKIYYMTQIGIKPPHFVCFCNDARLFHFSYQ 411
Query: 416 RYLE 419
RYLE
Sbjct: 412 RYLE 415
>gi|302386477|ref|YP_003822299.1| ribosome-associated GTPase EngA [Clostridium saccharolyticum WM1]
gi|302197105|gb|ADL04676.1| ribosome-associated GTPase EngA [Clostridium saccharolyticum WM1]
Length = 442
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 254/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTLFNVLAGDTISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+IIFIVD RQGLV+ D + + LRKS +PIVL +NK
Sbjct: 63 PDSSDIILSQMREQAEIAIATADVIIFIVDVRQGLVDADSKVADMLRKSKKPIVLAVNKV 122
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LGIG+P +SA G+ + L+ + K F E T
Sbjct: 123 DSFQKFGNDVYEFYNLGIGDPIPVSAASRLGLGDLLDEV-------AKHFDLSE-TEEEE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ ++AIVGKPNVGKS++IN LLGENRVI + GTTRD++ + + +Y+ IDTAG
Sbjct: 175 DDRPRIAIVGKPNVGKSSIINQLLGENRVIVSNIAGTTRDAVDTEIVHEGTEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E++S+I+T+ ++ A+VV++++DA++ ++ QD IA +E G+ ++V
Sbjct: 235 LRRKSKIKEELERYSIIRTVTAVERADVVVVVIDAEEGVTEQDAKIAGIAHERGKGIVVA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I + N IK L+F+ +A F FISA +N E I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTIYEYTNKIKNTLSFMPYAEFVFISAKTGLRMNKLFEVIDMVRENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + + A+ P K R +L Y Q PP VI N + Y RY
Sbjct: 355 RIATGILNEIMTEAVALQQPPSDKGKRLRLYYITQVAVKPPTFVIFVNDKELTHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|168186800|ref|ZP_02621435.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund]
gi|169295122|gb|EDS77255.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund]
Length = 438
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 256/422 (60%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y E +F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAEAEWLNNNFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK- 120
PE I+ +M +Q + AI +D+++FIVDG+QGL + D+ + + LRK+ + IVL +NK
Sbjct: 63 PENDDIIVAQMRRQAQLAIEMADVVLFIVDGKQGLTDADREVAHMLRKANKSIVLAVNKI 122
Query: 121 -SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ +I +FY LG+G P ISA G G+ + L+ ++ + F ++E
Sbjct: 123 DRRQLDDNI-YEFYNLGLGEPMPISASQGLGLGDLLDEVVG---KFPDFNGEEE-----E 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
EYI++A++G+PNVGKS+LIN +LGE + I + PGTTRD++ S E K++LIDTAG
Sbjct: 174 DEYIRIAMIGRPNVGKSSLINRILGEEKHIVSNIPGTTRDAVDSYIETEEGKFVLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E++S ++TL SI A+V IL++DA ++I+ QD I + +E ++++V
Sbjct: 234 LRRKSKIKEQVERYSAVRTLASIENADVCILMIDATEDIAEQDERIIGYAHEINKAIVVI 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + K+ ++ KL+FL +A F FISA ++ + Y++
Sbjct: 294 VNKWDLIEKDDKTMKNFKDKLRTKLSFLPYASFLFISAKTGQRVHKVLGMAKECYNNYCK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A+ P R K+ Y Q G PP V N + + Y+RY
Sbjct: 354 RIKTGILNDVINKAVLMKEPPVIGTRRLKIYYVTQIGTKPPTFVFFVNNPELLHFSYRRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|392972152|ref|ZP_10337544.1| GTPase Der [Staphylococcus equorum subsp. equorum Mu2]
gi|403046522|ref|ZP_10901991.1| GTP-binding protein EngA [Staphylococcus sp. OJ82]
gi|392509865|emb|CCI60846.1| GTPase Der [Staphylococcus equorum subsp. equorum Mu2]
gi|402763218|gb|EJX17311.1| GTP-binding protein EngA [Staphylococcus sp. OJ82]
Length = 436
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 258/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNVIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI ESD+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEVAIDESDVIIFMVNVREGLTQSDQVVAQMLYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G+P+ IS +G G+ + L+ ++ K FK++E + +
Sbjct: 122 DNPEMRNEIYDFYALGFGDPYPISGSHGLGLGDLLDEVV-------KHFKEEE-PDPYDD 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I+++I+G+PNVGKS+L+N++LGE RVI + GTTRD++ + + Y+++ Y+LIDTAG+
Sbjct: 174 DTIRLSIIGRPNVGKSSLVNAILGEERVIVSNIAGTTRDAVDTQYTYDDQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NV+++++DA Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYENTEKYSVLRALKAIERSNVILVVIDADQGIIEQDKRVAGYAHEEGKAIVIVV 293
Query: 301 NKWDSIIH--NQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ N K K+ ++K+ FL +A F+SA + + + I ++
Sbjct: 294 NKWDTVDKETNTMKKFKDEVRKEFQFLDYAEVAFVSAKESQRLRTLFPYITQASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + Y Q PP ++ N ++ + YKRYL
Sbjct: 354 VKSSTLNEVITDAISMNPTPTDKGRRLNVFYTTQVAIEPPTFIVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|338811521|ref|ZP_08623735.1| GTP-binding protein Der [Acetonema longum DSM 6540]
gi|337276488|gb|EGO64911.1| GTP-binding protein Der [Acetonema longum DSM 6540]
Length = 442
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 264/422 (62%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN++ R ++V + PG+TRDR Y + F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKIAKKRVSIVDDLPGVTRDRLYWDAEWLGHEFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ IM + +Q AI E+D+I+F+VD + G+ D+ + LR + +P++L +NK
Sbjct: 63 VDSNDFIMASVRRQAALAIEEADVILFVVDSKTGITTADEEVAALLRHANKPVILAVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++I S ++ +FY LG+G P +SA + + L+ ++ E P ++ ++++
Sbjct: 123 DSIKDSEAVYEFYGLGLGEPLAVSAANLLNLGDLLDAVVA-EFPPEQEAEEQD------- 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IK+A++G+PNVGKS+L+N LLG+ RVI D PGTTRD+I ++ E + Y+LIDTAG+
Sbjct: 175 DRIKIAVIGRPNVGKSSLVNGLLGQERVIVSDIPGTTRDAIDTVLEKDGVSYVLIDTAGM 234
Query: 241 RRRNK-TFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
R++ K E IE++SV+++L ++ A+VV+++LDA ++ QD IA + +E+G+SLI+
Sbjct: 235 RKKAKIEDESIERYSVVRSLSAVERADVVLMVLDAVDRVTEQDKKIAGYAHEAGKSLIIV 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + ++ I+ +L F+ +A FISA+ ++ +E +N+V + +
Sbjct: 295 VNKWDLVEKDSKTTLEYTQEIRNELAFMQYAPVLFISALTKQRVHRVLELVNYVAEQRSM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T+ + + + A+ +P K R K+ YA Q G NPP IV N + + Y R+
Sbjct: 355 RIATNVLNQVISDAVSINPTPSDKGKRLKIYYATQSGVNPPTIVFFVNDPEVMHFSYLRF 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|301059965|ref|ZP_07200844.1| ribosome-associated GTPase EngA [delta proteobacterium NaphS2]
gi|300445932|gb|EFK09818.1| ribosome-associated GTPase EngA [delta proteobacterium NaphS2]
Length = 435
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 249/421 (59%), Gaps = 11/421 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
M PV+ +VGRPNVGKSTLFNRLT S+ ALV + PG+TRDR +G ++DTGGF
Sbjct: 1 MPPVIAIVGRPNVGKSTLFNRLTRSKRALVDDRPGITRDRLHGTISHEGLQMTLVDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + + + Q + AI E+D IIF+VDGR+G++ D + + LR+ + + LV+NK
Sbjct: 61 EDLGQDPLQKGVRAQVETAIQEADRIIFMVDGREGVLPGDDEMAHLLRRMQKRVFLVVNK 120
Query: 121 SENINSS-ISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ +FY+LG + +SA +G G+K L +++ K E T S
Sbjct: 121 IDGPEKEHLAGEFYQLGYDAVYTLSAAHGYGVKALLNDLV-------KGLSPSEDTGEDS 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E I+VA++GKPNVGKS+LIN +L +R++ + PGTTRD++ S F Y ++Y+LIDTAG
Sbjct: 174 -EEIRVAVLGKPNVGKSSLINRILKTDRLVVSELPGTTRDTVDSAFSYGGREYLLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+++ E ++KFS+IK +KS+ +V +LLLD + +S QD I + E GR +++
Sbjct: 233 IRRKSRVREKVDKFSMIKAIKSLDRCHVAVLLLDGAEGVSDQDARICGYALEKGRGIVLA 292
Query: 300 VNKWDSIIHN--QRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+NKWD + N +R ++ I+++L F+SFA +SA+ + I+ VYD
Sbjct: 293 INKWDLVKGNVEKRNQLERGIERRLKFISFAPRINLSALTGERVMKLFSRIDSVYDQFSR 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + RA+ ++ HPP R R K Y Q PP + NR + Y+R+
Sbjct: 353 RIGTPLVNRAIQEVMEKHPPPRLGRGRLKFYYGTQTRTKPPTFTVFVNRPDMLHFSYERF 412
Query: 418 L 418
L
Sbjct: 413 L 413
>gi|326391582|ref|ZP_08213112.1| ribosome-associated GTPase EngA [Thermoanaerobacter ethanolicus JW
200]
gi|325992364|gb|EGD50826.1| ribosome-associated GTPase EngA [Thermoanaerobacter ethanolicus JW
200]
Length = 439
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 260/420 (61%), Gaps = 13/420 (3%)
Query: 4 VLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPE 63
++ +VGRPNVGKSTLFN++ R ++V + PG+TRDR YG K FI++DTGG +P
Sbjct: 5 IVSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNAEWLDKKFILVDTGGLDPN 64
Query: 64 VKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSEN 123
+ + ++ Q + AI SD+I+F+VD ++GL+ +D+ I N LR++ + ++LV NK ++
Sbjct: 65 AEDILFSKVRLQVEAAIDASDVILFLVDAKEGLMPEDEEIANILRRAKKEVILVCNKVDS 124
Query: 124 INS--SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
DF+ LG+GNP ISA G GI L+ ++ +LP ++ E+T E
Sbjct: 125 FKEMPPTYYDFFSLGLGNPIPISASNGLGIGELLDEVVK-KLPQEEL----EYTE----E 175
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
IK+A++GKPNVGKS+L+N +LGE RVI + PGTTRD+I + F + K Y+LIDTAGIR
Sbjct: 176 TIKIAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIR 235
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
R+++ E IE++SV++ L +I +++ +L++DA + + QD IA + +E+G+ +I+ VN
Sbjct: 236 RKSRISESIERYSVLRALAAIERSDICLLMIDATEGPTEQDTKIAGYAFENGKGIIIVVN 295
Query: 302 KWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD+I + + +++KL+F+SFA FISA ++ +E+++ V++ +
Sbjct: 296 KWDAIKKDNNTVNEYTKMVREKLSFISFAPILFISAKTGQRVHRVLETVDKVWEEYNKRI 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+T + L A+ PP K K+ Y Q G PP ++ N + + Y R++E
Sbjct: 356 TTGLLNNVLNEAMLMFPPPADKGKPLKVYYTSQVGIKPPSFIVFVNEPELMHFSYLRFIE 415
>gi|312143875|ref|YP_003995321.1| ribosome-associated GTPase EngA [Halanaerobium hydrogeniformans]
gi|311904526|gb|ADQ14967.1| ribosome-associated GTPase EngA [Halanaerobium hydrogeniformans]
Length = 438
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 255/423 (60%), Gaps = 14/423 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
K + +VGRPNVGKSTLFNRL R A+V P +TRDR YGE ++F +IDTGG
Sbjct: 3 KATVAIVGRPNVGKSTLFNRLVGGRRAIVEGEPNVTRDRIYGEAEWLDRTFNVIDTGGIV 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P I +++ Q + A+ E+D+I+F+VD R G+ D+ I L ++ + ++LV+NK
Sbjct: 63 PRDSDEIKNKIKYQAELAMEEADVILFVVDSRTGMTGIDQEIAQLLYRTNKEVLLVVNKV 122
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELP-YKKFFKKKEFTNIH 178
E+ + IS +FY LG G+P +ISA +G LE I + ELP Y++ K+E NI
Sbjct: 123 EDFSNQQEISWEFYSLGFGDPILISAEHGKNTGELLEKI-SAELPEYEEDEDKREAINI- 180
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
A++GKPNVGKS+LIN L+GENRVI D PGTTRD++ +L E+ + K+ IDTA
Sbjct: 181 -------AVIGKPNVGKSSLINHLVGENRVIVSDMPGTTRDAVDTLIEWKDIKFNFIDTA 233
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR+++ E IE +S ++ LKS+ ++ V++++DA + +S QD IA + ++ G+++++
Sbjct: 234 GLRRKSRVKESIEYYSNLRALKSVDRSDAVLMMIDATKGVSDQDKKIAGYAHDEGKAMVI 293
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+NKWD + + + + + + + +L FL++ +ISA+ I+ + + +V D S
Sbjct: 294 AINKWDLMKKDSKTMKRYTDEVYYELKFLNYVPITYISALTGERIDEMLSLLEYVVDQSN 353
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ + T + + A++ P +K R KL Y Q G PP V N + Y+R
Sbjct: 354 LRIKTGVLNEVISEAVQLREPPSRKGKRLKLYYGSQVGVKPPTFVFFVNDPNLMHFAYQR 413
Query: 417 YLE 419
YLE
Sbjct: 414 YLE 416
>gi|160880522|ref|YP_001559490.1| GTP-binding protein EngA [Clostridium phytofermentans ISDg]
gi|189037143|sp|A9KLK7.1|DER_CLOPH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|160429188|gb|ABX42751.1| small GTP-binding protein [Clostridium phytofermentans ISDg]
Length = 441
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 253/422 (59%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
K ++ +VGRPNVGKSTLFN L R ++V + PG+TRDR Y + K F ++DTGG E
Sbjct: 3 KSIVAVVGRPNVGKSTLFNALAGDRISIVKDTPGVTRDRIYADITWLDKQFTLVDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE K ++ M +Q + AI +D+I+F+VD RQGL++ D + + LR+SG+P++LV+NK
Sbjct: 63 PESKDMMLTYMREQAEIAIATADVIMFVVDVRQGLLDADNKVADMLRRSGKPVILVVNKV 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + + +FY LGIG+P +SA G + L+ ++ P
Sbjct: 123 DNFDKFMPDVYEFYNLGIGDPVPVSAASMLGFGDLLDLVVGHFPPEA--------LEEEE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++AIVGKPNVGKS++IN LLGENRVI D GTTRD+I + +N K Y+ IDTAG
Sbjct: 175 DERPRIAIVGKPNVGKSSIINKLLGENRVIVSDVAGTTRDAIDTAVTWNKKDYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E+FS+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKSKIKEELERFSIIRTVSAVERADVVVVVIDANEGVTEQDAKIAGIAHERGKGIIIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I + + I K N I++ L+FL +A F+SA + +SI V + +
Sbjct: 295 VNKWDAIEKDDKTIYKYTNRIREILSFLPYAEIMFLSAKTGQRVTKLFDSIEVVIQNRNL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST + ++ A P K R +L Y Q PP VI N + + Y RY
Sbjct: 355 RISTGVLNEIMMEATALQQPPSDKGKRLRLYYITQVAVKPPTFVIFVNDKELMHYSYTRY 414
Query: 418 LE 419
+E
Sbjct: 415 IE 416
>gi|374853981|dbj|BAL56875.1| small GTP-binding protein [uncultured Chloroflexi bacterium]
Length = 457
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/439 (38%), Positives = 252/439 (57%), Gaps = 30/439 (6%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ LVGRPNVGKSTLFNR R A+V PG TRDR +G + F ++DTGG +
Sbjct: 5 KPLVALVGRPNVGKSTLFNRFVGERLAIVDETPGTTRDRIFGSCEWNGQIFDVVDTGGID 64
Query: 62 PE------VKKG---IMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLR---- 108
P+ + G + E+ +Q + +DI++F+ DG++G D I LR
Sbjct: 65 PQHGGRSPLSTGSAEFIEEIRRQALLGVENADIVLFLTDGQEGPTPADHEIARLLRRHQK 124
Query: 109 -----KSGQPIVLVINKSEN-INSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIE 162
K PI+LV+NK E+ + S FYELG+G PH ISAL+G G + L+ I+ +
Sbjct: 125 KTAAGKLSPPILLVVNKCESEAQRAASAAFYELGLGEPHAISALHGTGTGDLLDRIVEL- 183
Query: 163 LPYKKFFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIK 222
LP + ++++ +K+AIVGKPNVGKS+L+N LLGE RVI PGTTRD+I
Sbjct: 184 LPRIEESEEED--------SVKIAIVGKPNVGKSSLLNRLLGEERVIVSPIPGTTRDAID 235
Query: 223 SLFEYNNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQD 282
+ EY LIDTAGIRRR + +E +SV+++L++I A+VV+L++DA I+AQD
Sbjct: 236 THLEYQGVPITLIDTAGIRRRGRIEPGVETYSVLRSLQAIDRADVVLLVIDATSGITAQD 295
Query: 283 INIANFIYESGRSLIVCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNN 340
+IA FI E+ +S +V VNKWD+I + + + K I+++LNF+ + F+SA
Sbjct: 296 AHIAGFILEAWKSCVVVVNKWDAIQKDSQTMEKWKQQIRQELNFMDYVPALFVSARTGQR 355
Query: 341 INSFMESINHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPII 400
++ + + V + + + TSR+ + L A PP + K+ YA Q PP
Sbjct: 356 VDQILPTALKVQEERLARIPTSRLNQLLQKAQDRQPPPAHAGRQLKIFYATQVRAAPPTF 415
Query: 401 VIHGNRLKYIGNDYKRYLE 419
+I+ N + Y RYLE
Sbjct: 416 LIYVNEPSLMHFTYMRYLE 434
>gi|303229883|ref|ZP_07316659.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-134-V-Col7a]
gi|302515439|gb|EFL57405.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-134-V-Col7a]
Length = 444
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 260/424 (61%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + N R ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTGGIE 62
Query: 62 --PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I M Q + AI E+D+I+F+VDG+QG+V D+ + N LR SG+P+VLV+N
Sbjct: 63 FVTENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRTSGKPVVLVVN 122
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K +++N ++ +FY LG+G+P ISA + + L++ + P TN+
Sbjct: 123 KIDSVNQEPNIYEFYNLGLGDPIGISAKNLMNLGDLLDDTVKHFPPVG--------TNVD 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I VAI+G+PNVGKS+L N+LLG++RVI D GTTRDSI + + + ++K++LIDTA
Sbjct: 175 EEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTHWTHGDQKFVLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +E++S++++L+S+ +++V+L+LD ++ QD IA + YE+G+ +I+
Sbjct: 235 GMRRKSKIDEAVERYSIVRSLRSVDRSDIVVLVLDGVDGVTEQDKKIAGYAYEAGKGVII 294
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD + + + ++ +I +L FL FA F SA+ I+ + + V +
Sbjct: 295 VVNKWDLVEKDDKTTLRYTEDIYDELGFLQFAPILFASALTKQRIHRLADMLKFVSEQQY 354
Query: 357 IHLSTSRITRALISAIKNHP-PCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ST + + L A +P P R I PK+ Y Q PP ++ N + I Y
Sbjct: 355 RRVSTGTLNQLLQDAQTVNPVPSRNGRI-PKIYYMTQASVKPPTFILFVNEPELIHFSYM 413
Query: 416 RYLE 419
R+LE
Sbjct: 414 RFLE 417
>gi|116873379|ref|YP_850160.1| GTP-binding protein EngA [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123458584|sp|A0AK49.1|DER_LISW6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|116742257|emb|CAK21381.1| GTPase family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 436
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 261/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y K F IIDTGG +
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + ++ Q + AI E+D+IIFI +GR+G+ + D+ + L +S +PIVL INK
Sbjct: 63 LS-DEPFLEQIRAQAEIAIDEADVIIFITNGREGVTDADEQVAKILYRSNKPIVLAINKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G P+ IS +G G+ + L+ + + F K+E +
Sbjct: 122 DNPEMRDQIYDFYSLGFGEPYPISGSHGLGLGDMLDAV-------RAHFPKEEEEE-YPD 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ +K +++G+PNVGKS+++N+LLGE+RVI D GTTRD+I + + ++ + Y++IDTAG+
Sbjct: 174 DTVKFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I ++VV+++++A++ I QD IA + +++GR++I+ V
Sbjct: 234 RKRGKVYESTEKYSVLRAMRAIERSDVVLVVINAEEGIREQDKRIAGYAHDAGRAIIIVV 293
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+I +++ I +I+++ FLS+A F+SA +N+ IN V D+ +
Sbjct: 294 NKWDAINKDEKTINVWTEDIREQFQFLSYAPIVFVSAKTKQRLNNLFPLINQVSDNHSLR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + A+ +P + R K+ Y Q PP V+ N + + Y+R+L
Sbjct: 354 VQSSMLNDVISDAVAMNPSPMDRGKRLKIFYTTQVAVKPPTFVVFVNDPELMHFSYERFL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|349686251|ref|ZP_08897393.1| GTP-binding protein Der [Gluconacetobacter oboediens 174Bp2]
Length = 473
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 241/431 (55%), Gaps = 15/431 (3%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
PV+V+ GRPNVGKST+FNRL R ALVA+ PG+TRDR G+ + ++ IIDT G E
Sbjct: 14 PVVVIAGRPNVGKSTIFNRLVGRRQALVADTPGVTRDRKEGQATVRGRAIRIIDTAGLEE 73
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ M ++ A+ ++D+++F +D R GL D+ N+LR+ G+P++L+ NK+E
Sbjct: 74 AAPDTLYGRMRASSESAVADADLVLFCIDARSGLTPADEHFANWLRRQGRPVLLIANKAE 133
Query: 123 N-INSSISLDFYELGIGNPHIISALYGNGIKNFLENIL---------TIELPYKKFFKKK 172
++ +++ + LG+G P ISA +G G+ + + I ++ P ++ +++
Sbjct: 134 GRQGAAAAMEAFSLGLGAPLAISAEHGEGVADLMSEIADRLPPTDLPPVQKPTRRSRREQ 193
Query: 173 ---EFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNN 229
E ++ +++AIVG+PN GKSTL+N LLGE R+IT PG TRDSI + +
Sbjct: 194 AEGEEEDVRPPGPLRLAIVGRPNAGKSTLLNRLLGEERMITGPEPGLTRDSIAVMLHDDQ 253
Query: 230 KKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFI 289
L+DTAG+RR+ + E +EK SV +++++ A VVIL+LDA + QD+ IA I
Sbjct: 254 GPIQLVDTAGLRRKARIDETLEKMSVSASIEALKMAEVVILVLDATLGVHEQDLQIARLI 313
Query: 290 YESGRSLIVCVNKWDSIIHNQ--RKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMES 347
GR ++ +NKWD++ R+ IK+ I+ L + SA+ IN + +
Sbjct: 314 EREGRCCVLALNKWDAVEDRAATRQAIKDRIETSLAQMRGIPVVAFSAMTGAGINKLLPT 373
Query: 348 INHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRL 407
+ YD + T + R ++ HPP R KLRY Q PP ++ G R
Sbjct: 374 VRRAYDIWNRRVPTGALNRWFEMMVERHPPPLVDGRRLKLRYITQAKARPPTFIVFGTRT 433
Query: 408 KYIGNDYKRYL 418
+ DY+RYL
Sbjct: 434 DQLPEDYQRYL 444
>gi|303232074|ref|ZP_07318777.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-049-V-Sch6]
gi|302513180|gb|EFL55219.1| ribosome-associated GTPase EngA [Veillonella atypica
ACS-049-V-Sch6]
Length = 444
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 260/424 (61%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + N R ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTGGIE 62
Query: 62 --PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I M Q + AI E+D+I+F+VDG+QG+V D+ + N LR SG+P+VLV+N
Sbjct: 63 FVTENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRTSGKPVVLVVN 122
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K +++N ++ +FY LG+G+P ISA + + L++ + P TN+
Sbjct: 123 KIDSVNQESNIYEFYNLGLGDPIGISAKNLMNLGDLLDDTVKHFPPVG--------TNVD 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I VAI+G+PNVGKS+L N+LLG++RVI D GTTRDSI + + + ++K++LIDTA
Sbjct: 175 EEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTHWTHGDQKFVLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +E++S++++L+S+ +++V+L+LD ++ QD IA + YE+G+ +I+
Sbjct: 235 GMRRKSKIDEAVERYSIVRSLRSVDRSDIVVLVLDGVDGVTEQDKKIAGYAYEAGKGVII 294
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD + + + ++ +I +L FL FA F SA+ I+ + + V +
Sbjct: 295 VVNKWDLVEKDDKTTLRYTEDIYDELGFLQFAPILFASALTKQRIHRLADMLKFVSEQQY 354
Query: 357 IHLSTSRITRALISAIKNHP-PCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ST + + L A +P P R I PK+ Y Q PP ++ N + I Y
Sbjct: 355 RRVSTGTLNQLLQDAQTVNPVPSRNGRI-PKIYYMTQASVKPPTFILFVNEPELIHFSYM 413
Query: 416 RYLE 419
R+LE
Sbjct: 414 RFLE 417
>gi|415885325|ref|ZP_11547253.1| GTP-binding protein EngA [Bacillus methanolicus MGA3]
gi|387590994|gb|EIJ83313.1| GTP-binding protein EngA [Bacillus methanolicus MGA3]
Length = 436
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 258/425 (60%), Gaps = 20/425 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF- 60
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y F IIDTGG
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERISIVEDIPGVTRDRIYSSAEWLTHDFNIIDTGGID 62
Query: 61 ---EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
EP + ++ +Q + AI E+D+IIFI +GR+G+ D+ + L KS +P+VL
Sbjct: 63 IGDEP-----FLEQIRQQAEIAINEADVIIFITNGREGVTAADEEVAKILYKSRKPVVLA 117
Query: 118 INKSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTN 176
+NK +N + + DFY LG G P IS +G G+ + L+ + K F +K+E +
Sbjct: 118 VNKVDNPDMRDQIYDFYSLGFGEPIPISGTHGLGLGDLLDEVA------KHFPRKQE--D 169
Query: 177 IHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
+ + IK ++G+PNVGKS+L+N+LLGE RVI D GTTRD+I S + YN +KY++ID
Sbjct: 170 EYDDDVIKFCLIGRPNVGKSSLVNALLGEERVIVSDIAGTTRDAIDSPYTYNGQKYVIID 229
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R++ K +E EK+SV++ L++I ++VV+++L+ ++ I QD IA + +E+GR++
Sbjct: 230 TAGMRKKGKIYETTEKYSVLRALRAIERSDVVLVVLNGEEGIIEQDKRIAGYAHEAGRAV 289
Query: 297 IVCVNKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
++ VNKWD++ +++ K + I+ FL +A F+SA I++ M IN ++
Sbjct: 290 VIVVNKWDAVEKDEKTMKEFEQKIRDHFQFLDYAPIVFLSAKTKKRIHTLMPMINMASEN 349
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ + TS + ++ A+ +P K R K+ Y Q PP V+ N + + Y
Sbjct: 350 HALRVETSVLNDVIMDAVAMNPTPTDKGRRLKIFYTTQVAVKPPTFVVFVNDPELLHFSY 409
Query: 415 KRYLE 419
+R+LE
Sbjct: 410 ERFLE 414
>gi|291543597|emb|CBL16706.1| ribosome-associated GTPase EngA [Ruminococcus champanellensis
18P13]
Length = 442
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/421 (37%), Positives = 246/421 (58%), Gaps = 12/421 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
P++ +VGRPNVGKSTLFN+L R ++V + PG+TRDR Y + + F+++DTGG EP
Sbjct: 4 PIVAVVGRPNVGKSTLFNKLIGQRLSIVEDTPGVTRDRIYSKCEWRGREFMVVDTGGIEP 63
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ I+ +M +Q + AI +D+I+ + D R G+ D + + L+KSG+P+VL +NK +
Sbjct: 64 DTDDVILAQMRRQAEVAIHRADVIVLVTDVRCGVTANDYAVADMLQKSGKPVVLAVNKCD 123
Query: 123 NINSS-ISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
I + L +FY LGIG P IS+ +G+G + L+ IL K+ + + + +
Sbjct: 124 TIGEPPLELYEFYNLGIGEPFPISSQHGHGTGDMLDEIL-------KYLPETDAED-YDE 175
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IKVA++GKPN GKS+LIN + GE RVI D GTTRD+ ++ E K++ IDTAGI
Sbjct: 176 DCIKVAVIGKPNAGKSSLINKIAGEERVIVSDIAGTTRDATDTVVENEQGKFVFIDTAGI 235
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++++ E +E FSV++ ++ A+V I+++DAQ + QD +A + +E G++ I+ V
Sbjct: 236 RKKSRITERVEHFSVLRAYMAVDRADVCIIMIDAQTGFTEQDSKVAGYAHEQGKASIIAV 295
Query: 301 NKWDSIIH--NQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD I N K + ++K +F+S+ F FISA +N E I+ V + + I
Sbjct: 296 NKWDLIEKDTNTMKEFQEKLEKDFSFMSYVPFVFISAKTGQRVNKLFEMIHFVANQNAIR 355
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ST + L A P K R K+ Y Q PP V NR Y+RY+
Sbjct: 356 ISTGTLNDVLAYATTRVQPPSDKGRRLKIYYMTQVSTKPPTFVTFVNRADLFHFSYQRYI 415
Query: 419 E 419
E
Sbjct: 416 E 416
>gi|429759353|ref|ZP_19291852.1| ribosome biogenesis GTPase Der [Veillonella atypica KON]
gi|429179629|gb|EKY20868.1| ribosome biogenesis GTPase Der [Veillonella atypica KON]
Length = 454
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 260/424 (61%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + N R ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 13 KPLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTGGIE 72
Query: 62 --PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I M Q + AI E+D+I+F+VDG+QG+V D+ + N LR SG+P+VLV+N
Sbjct: 73 FVTENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRTSGKPVVLVVN 132
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K +++N ++ +FY LG+G+P ISA + + L++ + P TN+
Sbjct: 133 KIDSVNQEPNIYEFYNLGLGDPIGISAKNLMNLGDLLDDTVKHFPPVG--------TNVD 184
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I VAI+G+PNVGKS+L N+LLG++RVI D GTTRDSI + + + ++K++LIDTA
Sbjct: 185 EEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTHWTHGDQKFVLIDTA 244
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +E++S++++L+S+ +++V+L+LD ++ QD IA + YE+G+ +I+
Sbjct: 245 GMRRKSKIDEAVERYSIVRSLRSVDRSDIVVLVLDGVDGVTEQDKKIAGYAYEAGKGVII 304
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD + + + ++ +I +L FL FA F SA+ I+ + + V +
Sbjct: 305 VVNKWDLVEKDDKTTLRYTEDIYDELGFLQFAPILFASALTKQRIHRLADMLKFVSEQQY 364
Query: 357 IHLSTSRITRALISAIKNHP-PCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ST + + L A +P P R I PK+ Y Q PP ++ N + I Y
Sbjct: 365 RRVSTGTLNQLLQDAQTVNPVPSRNGRI-PKIYYMTQASVKPPTFILFVNEPELIHFSYM 423
Query: 416 RYLE 419
R+LE
Sbjct: 424 RFLE 427
>gi|290968707|ref|ZP_06560245.1| ribosome-associated GTPase EngA [Megasphaera genomosp. type_1 str.
28L]
gi|335049710|ref|ZP_08542697.1| ribosome biogenesis GTPase Der [Megasphaera sp. UPII 199-6]
gi|290781360|gb|EFD93950.1| ribosome-associated GTPase EngA [Megasphaera genomosp. type_1 str.
28L]
gi|333762445|gb|EGL39943.1| ribosome biogenesis GTPase Der [Megasphaera sp. UPII 199-6]
Length = 443
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/428 (37%), Positives = 264/428 (61%), Gaps = 24/428 (5%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + R A+V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPLVAVVGRPNVGKSTLFNAIVKKRIAIVEDIPGVTRDRIYFDAEWLGREFTMIDTGGIE 62
Query: 62 -PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ I +M Q + AI E+D+I+F+VDG+ G+ QD+ + N LR G+P++LV+NK
Sbjct: 63 FVDAADRIFTDMRYQAELAIREADVILFVVDGKTGMQPQDEEVANILRTCGKPVLLVVNK 122
Query: 121 SENINSSISL-DFYELGIGNPHIISAL----YGNGIKNFLENILTIELPYKKFFKKKEFT 175
+++ +++ +FY LG+G+P +SA+ G+ + + L++I + P +++E T
Sbjct: 123 IDSVEQEMNMYEFYALGMGDPIGVSAVNLMNLGDLLDSVLQHIQHLPTP-----EEREDT 177
Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
I +A+VG+PNVGKS++ N+LLG+ RVI + PGTTRDSI + + YN+ ++LI
Sbjct: 178 -------IHIALVGRPNVGKSSMTNALLGQERVIVSNVPGTTRDSIDTYWTYNDTSFVLI 230
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG+RR+ K +E++SV++ L+++ ++V +L+LDAQ ++ QD IA +I+E+G+
Sbjct: 231 DTAGMRRKAKVDIPVERYSVVRALRAVDRSDVAVLVLDAQDGVTEQDKKIAGYIHEAGKG 290
Query: 296 LIVCVNKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
I+ VNKWD I + + + + +I+++L FL +A F SA+ +N + + V +
Sbjct: 291 CIIVVNKWDLIDKDSKTSQAFEEDIRRELAFLQYAPILFASALTKQRVNRLADMVKFVAE 350
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRK--KLIRPKLRYAHQGGKNPPIIVIHGNRLKYIG 411
+ +STS + L A +PP K KL+R + Y Q PP ++ N + +
Sbjct: 351 QQHMRVSTSVLNELLEDAQLTNPPPAKGGKLLR--IYYMTQASVQPPTFILFVNEPRLMH 408
Query: 412 NDYKRYLE 419
Y R+LE
Sbjct: 409 FSYVRFLE 416
>gi|297591047|ref|ZP_06949685.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MN8]
gi|297575933|gb|EFH94649.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus MN8]
Length = 436
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 258/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + DFY LG G P+ IS +G G+ + L+ +++ F ++E
Sbjct: 122 DNMEMRTDVYDFYSLGFGEPYPISGAHGLGLGDLLDAVVS-------HFGEEEEDPYDED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD+I + + Y+ + Y+LIDTAG+
Sbjct: 175 T-IRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKAVVIVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++ ++K+ FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERTRLRTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP V+ N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|295091914|emb|CBK78021.1| ribosome-associated GTPase EngA [Clostridium cf. saccharolyticum
K10]
Length = 444
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 254/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKSTLFN L ++V + PG+TRDR Y + K+F +IDTGG E
Sbjct: 5 KPVVAVVGRPNVGKSTLFNVLAGEMISIVKDTPGVTRDRIYADCTWLDKAFTLIDTGGIE 64
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ + I+ +M +Q + AI +D+IIFIVD RQGL + D + + LRKS +P++L +NK
Sbjct: 65 PDSRDIILAQMREQAEIAIATADVIIFIVDVRQGLTDSDSKVADMLRKSRKPVILAVNKV 124
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LGIG+P ISA G+ L+ ++ P ++ +
Sbjct: 125 DSFAKFGNDVYEFYNLGIGDPIPISAASRLGLGELLDAVVA-HFPEDTGEEEDDDRP--- 180
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
++AIVGKPNVGKS+++N LLGENRVI + GTTRD++ + +N +Y+ IDTAG
Sbjct: 181 ----RIAIVGKPNVGKSSIVNKLLGENRVIVSNIAGTTRDAVDTEIVHNGTEYVFIDTAG 236
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA ++ G+ +I+
Sbjct: 237 LRRKNKIKEELERYSIIRTVTAVERADVVLVVIDATEGVTEQDAKIAGIAHDRGKGIIIV 296
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I + N IK L+F+ +A + F+SA +N + I+ V ++ +
Sbjct: 297 VNKWDAIEKNDKTIYEYTNKIKTILSFVPYAEYVFVSAQTGQRLNKLYDLIDMVRENQTM 356
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A+ P K R KL Y Q PP V+ N + + Y RY
Sbjct: 357 RIQTGVLNEIMTEAVALQQPPSDKGKRLKLYYMTQVAVKPPTFVVFVNDKELMHFSYTRY 416
Query: 418 LE 419
LE
Sbjct: 417 LE 418
>gi|425737298|ref|ZP_18855571.1| GTP-binding protein Der [Staphylococcus massiliensis S46]
gi|425482646|gb|EKU49802.1| GTP-binding protein Der [Staphylococcus massiliensis S46]
Length = 436
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 256/421 (60%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTDEFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D++I L +S +P+VL +NK
Sbjct: 63 IS-DAPFQTQIRAQAEIAIDEADVIIFMVNIREGLTQDDEMIAQMLYRSNKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G P IS +G G+ + L+ + K FK++E + +
Sbjct: 122 DNPKMRAEIYDFYALGFGEPFPISGSHGLGLGDLLDEV-------KNHFKREE-EDPYDE 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IK++I+G+PNVGKS+L+N++LGE RVI + GTTRD+I + + ++++ Y+LIDTAG+
Sbjct: 174 DTIKLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAIDTEYTFDDQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKAIVIVV 293
Query: 301 NKWDSI--IHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ +N K + ++ + FL +A F+SA + + + I ++
Sbjct: 294 NKWDTVEKENNTMKKFADKVRNEFQFLDYAQIAFVSAKQKQRLRTIFPYIKEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + A+ +P K R + YA Q PP VI N ++ + YKRYL
Sbjct: 354 VKSSTLNEVVTDAVSMNPTPTDKGRRLNIFYATQVAIEPPTFVIFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|187778884|ref|ZP_02995357.1| hypothetical protein CLOSPO_02479 [Clostridium sporogenes ATCC
15579]
gi|187772509|gb|EDU36311.1| ribosome biogenesis GTPase Der [Clostridium sporogenes ATCC 15579]
Length = 439
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/421 (39%), Positives = 252/421 (59%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y E F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + I+ +M +Q + AI +++IIF+VDG++GL D+ + LRKS +P+VLV+NK
Sbjct: 63 PESEDIIISQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVAQMLRKSKKPVVLVVNKI 122
Query: 122 ENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ + + + +FY LGIG+P IS+ G+ + L+ ++ + FK + ++
Sbjct: 123 DKLKDEDNAYEFYNLGIGDPVTISSSQALGLGDMLDRVV-------EHFKDDK-SDGEED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E I +A VGKPNVGKS+LIN LLGE R+I + PGTTRDSI S + ++ LIDTAG+
Sbjct: 175 ERINIAFVGKPNVGKSSLINKLLGEERLIVSNIPGTTRDSIDSYVNTDFGEFTLIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SVI+T SI A+V IL++DA + IS QD I + ++ ++++V V
Sbjct: 235 RRKSKVKEEIERYSVIRTYASIERADVCILMIDATEGISEQDQKIIGYAHDLNKAILVIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K +K L+F+++A + FISA + +++ YD+
Sbjct: 295 NKWDLVEKDDKTMDKFKKELKVNLSFMAYAKYLFISAKTGQRVVKVLQTAKECYDNYTKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + AI P R K+ Y Q G PP V N I Y+RYL
Sbjct: 355 VKTGVLNDVISQAIMMKEPPIVGTKRLKIYYVTQIGTKPPTFVFFVNDPACIHFSYQRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|404418697|ref|ZP_11000464.1| GTP-binding protein Der [Staphylococcus arlettae CVD059]
gi|403489290|gb|EJY94868.1| GTP-binding protein Der [Staphylococcus arlettae CVD059]
Length = 436
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/426 (36%), Positives = 258/426 (60%), Gaps = 22/426 (5%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSTGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNIREGLTQSDEIVAQLLYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-----IELPYKKFFKKKEFT 175
+N + DFY LG G P+ IS +G G+ + L+ ++T +E PY +
Sbjct: 122 DNPEMRNEIYDFYALGFGEPYPISGSHGLGLGDLLDAVVTHFKEDVEDPYDE-------- 173
Query: 176 NIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILI 235
+ I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD++ + + Y+++ ++LI
Sbjct: 174 -----DTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAVDTEYSYDDQNFVLI 228
Query: 236 DTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRS 295
DTAG+R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G++
Sbjct: 229 DTAGMRKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEEGKA 288
Query: 296 LIVCVNKWDSIIH--NQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYD 353
+++ VNKWD++ N K K+ ++K+ FL +A F+SA + + + I +
Sbjct: 289 IVIVVNKWDTVDKETNTMKKFKDEVRKEFQFLDYAEIAFVSAKERQRLKTLFPYIKEASE 348
Query: 354 SSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGND 413
+ + +S + + AI +P K R + YA Q PP +I N ++ +
Sbjct: 349 NHKKRVKSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFIIFVNDVELMHFS 408
Query: 414 YKRYLE 419
YKRYLE
Sbjct: 409 YKRYLE 414
>gi|424834977|ref|ZP_18259649.1| GTP-binding protein Der [Clostridium sporogenes PA 3679]
gi|365978337|gb|EHN14428.1| GTP-binding protein Der [Clostridium sporogenes PA 3679]
Length = 439
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/421 (39%), Positives = 252/421 (59%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y E F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + I+ +M +Q + AI +++IIF+VDG++GL D+ + LRKS +P+VLV+NK
Sbjct: 63 PESEDIIISQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVAQMLRKSKKPVVLVVNKI 122
Query: 122 ENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ + + + +FY LGIG+P IS+ G+ + L+ ++ + FK + ++
Sbjct: 123 DKLKDEDNAYEFYNLGIGDPITISSSQALGLGDMLDRVV-------EHFKDDK-SDGEED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E I +A VGKPNVGKS+LIN LLGE R+I + PGTTRDSI S + ++ LIDTAG+
Sbjct: 175 ERINIAFVGKPNVGKSSLINKLLGEERLIVSNIPGTTRDSIDSYVNTDFGEFTLIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SVI+T SI A+V IL++DA + IS QD I + ++ ++++V V
Sbjct: 235 RRKSKVKEEIERYSVIRTYASIERADVCILMIDATEGISEQDQKIIGYAHDLNKAILVIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K +K L+F+++A + FISA + +++ YD+
Sbjct: 295 NKWDLVEKDDKTMDKFKKELKVNLSFMAYAKYLFISAKTGQRVVKVLQTAKECYDNYTKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + AI P R K+ Y Q G PP V N I Y+RYL
Sbjct: 355 VKTGVLNDVISQAIMMKEPPIVGTKRLKIYYVTQIGTKPPTFVFFVNDPACIHFSYQRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|357057998|ref|ZP_09118855.1| GTP-binding protein engA [Selenomonas infelix ATCC 43532]
gi|355374575|gb|EHG21869.1| GTP-binding protein engA [Selenomonas infelix ATCC 43532]
Length = 441
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/422 (37%), Positives = 257/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN++ R ++V + PG+TRDR Y + F IIDTGG E
Sbjct: 3 KPIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I+ M Q + A+ E+D+I+F+VDGR GL D+ + LR++ +P++L +NK
Sbjct: 63 FDESDHILRSMRSQAELAMEEADVILFLVDGRAGLTSSDEEVGRLLRRTQKPVILAVNKI 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++ ++ DFY LG+G+P ISA + + L+ ++ F K+ NI +
Sbjct: 123 DSFEREALIYDFYSLGLGDPIPISASNAMNLGDLLDAVVAA-------FPKEAEENIDAD 175
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E I +A+VG+PNVGKS+L+N LLGE RVI D PGTTRD+I + F + KY+LIDTAG+
Sbjct: 176 E-IAIAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTTRDAIDTHFTRDGAKYLLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ K +E++SV+++L++I A VV+++++A + I QD IA +++ESG+ +I+ V
Sbjct: 235 RRKGKISLPVERYSVMRSLRAIDRAGVVLMVINAAEGILEQDTKIAGYVHESGKGVIIVV 294
Query: 301 NKWDSIIH-NQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
NKWD N + ++ +++++KL FL +A + SA+ + E + +V + +
Sbjct: 295 NKWDIFPEKNDKSTLRFTDDLREKLGFLQYAPVLYTSALTGQRVERVTELVKYVAEQQSM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ TS + + A+ +PP KK + K+ + Q G PP +I N + + Y R+
Sbjct: 355 RIKTSVLNELIRDAVSVNPPPTKKGKQLKILFVTQVGITPPTFIIFVNDPELMHFSYLRF 414
Query: 418 LE 419
+E
Sbjct: 415 IE 416
>gi|167037254|ref|YP_001664832.1| GTP-binding protein EngA [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256752010|ref|ZP_05492879.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1]
gi|320115673|ref|YP_004185832.1| ribosome-associated GTPase EngA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|238687651|sp|B0K8N3.1|DER_THEP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166856088|gb|ABY94496.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256749120|gb|EEU62155.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1]
gi|319928764|gb|ADV79449.1| ribosome-associated GTPase EngA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 439
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 258/417 (61%), Gaps = 13/417 (3%)
Query: 7 LVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEVKK 66
+VGRPNVGKSTLFN++ R ++V + PG+TRDR YG K FI++DTGG +P +
Sbjct: 8 IVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNVEWLDKKFILVDTGGLDPNAED 67
Query: 67 GIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINS 126
+ ++ Q + AI SD+I+F+VD ++GL+ +D+ I N LR++ + ++LV NK ++
Sbjct: 68 ILFSKVRLQVEAAIDASDVILFLVDAKEGLMPEDEEIANILRRAKKEVILVCNKVDSFKE 127
Query: 127 --SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEYIK 184
DF+ LG+GNP ISA G GI L+ ++ +LP ++ E+T E IK
Sbjct: 128 MPPTYYDFFSLGLGNPIPISASNGLGIGELLDEVVK-KLPQEEL----EYTE----ETIK 178
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
+A++GKPNVGKS+L+N +LGE RVI + PGTTRD+I + F + K Y+LIDTAGIRR++
Sbjct: 179 IAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRKS 238
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ E IE++SV++ L +I +++ +L++DA + + QD IA + +E+G+ +I+ VNKWD
Sbjct: 239 RISESIERYSVLRALAAIERSDICLLMIDATEGPTEQDTKIAGYAFENGKGIIIVVNKWD 298
Query: 305 SIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTS 362
+I + + +++KL+F+SFA FISA ++ +E+++ V++ ++T
Sbjct: 299 AIKKDNNTVNEYTKMVREKLSFISFAPILFISAKTGQRVHRVLETVDKVWEEYNKRITTG 358
Query: 363 RITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+ L A+ PP K K+ Y Q G PP V+ N + + Y R++E
Sbjct: 359 LLNNVLNEAMLMFPPPADKGKPLKVYYTSQVGIKPPSFVVFVNEPELMHFSYLRFIE 415
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 185 VAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRN 244
V+IVG+PNVGKSTL N ++G+ I D PG TRD I E+ +KK+IL+DT G+
Sbjct: 6 VSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRIYGNVEWLDKKFILVDTGGLDPNA 65
Query: 245 KTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWD 304
+ +++ ++ +I ++V++ L+DA++ + +D IAN + + + +I+ NK D
Sbjct: 66 E--DILFSKVRLQVEAAIDASDVILFLVDAKEGLMPEDEEIANILRRAKKEVILVCNKVD 123
Query: 305 S 305
S
Sbjct: 124 S 124
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF--EP 62
+ ++G+PNVGKS+L N++ +V+N PG TRD K++++IDT G +
Sbjct: 179 IAVIGKPNVGKSSLVNKILGEERVIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGIRRKS 238
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
+ + I + AI SDI + ++D +G EQD I + ++G+ I++V+NK +
Sbjct: 239 RISESIERYSVLRALAAIERSDICLLMIDATEGPTEQDTKIAGYAFENGKGIIIVVNKWD 298
Query: 123 NI 124
I
Sbjct: 299 AI 300
>gi|418318769|ref|ZP_12930162.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21232]
gi|365242111|gb|EHM82833.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21232]
Length = 436
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 259/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q++ AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQSEIAIDEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + DFY LG G P+ IS +G G+ + L+ +++ F ++E
Sbjct: 122 DNMEMRTDVYDFYSLGFGEPYPISGSHGLGLGDLLDAVVS-------HFGEEEEDPYDED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD+I + + Y+ + Y+LIDTAG+
Sbjct: 175 T-IRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKAVVIVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++ ++K+ FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERTRLRTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP V+ N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|357038543|ref|ZP_09100340.1| GTP-binding protein engA [Desulfotomaculum gibsoniae DSM 7213]
gi|355359335|gb|EHG07097.1| GTP-binding protein engA [Desulfotomaculum gibsoniae DSM 7213]
Length = 442
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 260/421 (61%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
K ++ +VGRPNVGKSTLFNR+ R A+V PG+TRDR Y + + F ++DTGG +
Sbjct: 9 KSIVAIVGRPNVGKSTLFNRIVGGRVAIVEGVPGVTRDRLYQDAEWNNRWFTLVDTGGLD 68
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + I+ + KQ + AI E+D+++F+VD R GL D+ + LR+S +P++LV NK
Sbjct: 69 YQDEGEIVSHIRKQAELAIEEADLVLFVVDARAGLNGTDEDVARVLRRSEKPVILVANKV 128
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
E+ + L DFY LG+G P +SA G + L+ ++ ELP + + +E
Sbjct: 129 EHFDKVHELYDFYRLGLGEPLPVSAAEGLNTGDLLDRLVQ-ELPPAEEDETEE------- 180
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IK+A++G+PNVGKS+L+N+LLGE RVI + PGTTRD+I S + KY +IDTAGI
Sbjct: 181 DVIKIAVIGRPNVGKSSLVNALLGEERVIVSNIPGTTRDAIDSYITRGDNKYSIIDTAGI 240
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RRR+K EK+SVI++L+++ +++V++L+DA + ++ QD IA + +E GR+ I+ V
Sbjct: 241 RRRSKIGLSTEKYSVIRSLRAVDRSDIVLMLIDAVEQLTDQDKRIAGYAHEKGRASILVV 300
Query: 301 NKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + R + N++ L F+ +A F+SA+ ++ +E +++V + +
Sbjct: 301 NKWDLVEKDDRTANRYIENLRDGLGFMQYAPVLFVSALTHQRVHRVLELVDYVSEQQNMR 360
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
++T+ + + L A+ ++ P + + K+ YA Q G PP ++ N + + Y RY+
Sbjct: 361 IATADLNQLLREAMLHNAPPQDRGRHLKIFYATQAGVKPPTFILFVNEPELMHFSYLRYI 420
Query: 419 E 419
E
Sbjct: 421 E 421
>gi|323141760|ref|ZP_08076630.1| ribosome biogenesis GTPase Der [Phascolarctobacterium succinatutens
YIT 12067]
gi|322413749|gb|EFY04598.1| ribosome biogenesis GTPase Der [Phascolarctobacterium succinatutens
YIT 12067]
Length = 442
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 257/421 (61%), Gaps = 9/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN NSR ++V + PG+TRDR Y F+++DTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNIFANSRISIVEDTPGVTRDRLYATAEWLDHEFMMVDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
I + +Q + AI E+D+I+F+ D R G+ +D + LR+S +PIVL +NK+
Sbjct: 63 IMNADAIAVSIRQQAQIAIKEADVILFVCDARAGITTEDADVARLLRQSKKPIVLAVNKA 122
Query: 122 ENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++ + + +FY LGIG+P +SA G+ + L+ ++ KF K ++
Sbjct: 123 DSPKQEMNTFEFYNLGIGDPIAVSASNHLGLGDLLDAVVA------KFPSDKMAGDLEEE 176
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ IKVA++G+PNVGKS++ N+L+GE R I D GTTRD+I + N +KY+ IDTAG+
Sbjct: 177 DEIKVALIGRPNVGKSSIFNALVGEERSIVSDIAGTTRDAIDTPVVRNGQKYLFIDTAGM 236
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ K E IEK+SV+++L+++ ++VV+++ DA + ++ QD I + +E+G+++I+ V
Sbjct: 237 RRKAKVDEPIEKYSVMRSLRAVDRSDVVLMVFDAVEGVTEQDKRIVGYAHEAGKAVILVV 296
Query: 301 NKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + ++ ++K+L FL +A F+SA+ I+ E I++V + + +
Sbjct: 297 NKWDLYEKDNSSTLRYTETLRKELVFLQYAPVVFVSAVTKQRIHRLPEVISYVAEQNAMR 356
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
++TS + + + A+ +PP +K R K+ Y Q PP VI N + + Y+RYL
Sbjct: 357 IATSILNQVIEDAVAINPPPTEKGKRLKILYVTQVKIKPPTFVIFVNEPEIMHFSYQRYL 416
Query: 419 E 419
E
Sbjct: 417 E 417
>gi|163848650|ref|YP_001636694.1| GTP-binding protein EngA [Chloroflexus aurantiacus J-10-fl]
gi|222526586|ref|YP_002571057.1| GTP-binding protein EngA [Chloroflexus sp. Y-400-fl]
gi|189037140|sp|A9WHH9.1|DER_CHLAA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|254783145|sp|B9LBT6.1|DER_CHLSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|163669939|gb|ABY36305.1| small GTP-binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222450465|gb|ACM54731.1| small GTP-binding protein [Chloroflexus sp. Y-400-fl]
Length = 449
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/428 (37%), Positives = 249/428 (58%), Gaps = 18/428 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDT---- 57
KP++ +VGRPNVGKST FNRL R A+V + PG TRDR YG+ + + F ++DT
Sbjct: 3 KPIVAIVGRPNVGKSTFFNRLIGERRAIVEDLPGTTRDRLYGDTFWNGREFTVVDTAGVL 62
Query: 58 -GGFEPEVKKGIMHEMTK-QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIV 115
GG +P + + + T+ Q + AI E+D IIFIVDGR GL D + + LR + +P+V
Sbjct: 63 FGGEDPNLPEAEIARRTRAQAEHAIAEADAIIFIVDGRDGLTAADSDVADVLRTTSKPVV 122
Query: 116 LVINKSENINSSI-SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEF 174
L +NK ++ + +++FY L +G P +SA +G G + L+ LT LP K F +++E
Sbjct: 123 LAVNKCDSQERMLDAVEFYALNLGEPIPMSAFHGLGTGDVLDR-LTEYLPPKTFTQEEE- 180
Query: 175 TNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYIL 234
++++AIVG+PNVGKS+L+N LLG+ R + PGTTRD I + Y+ + L
Sbjct: 181 ------RHLRIAIVGRPNVGKSSLLNRLLGQERSVVSSIPGTTRDPIDTTITYHGEPITL 234
Query: 235 IDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGR 294
IDTAGIRR K IEK+SV++TL++I +V +LL+DA + ++AQD +IA + E+ +
Sbjct: 235 IDTAGIRRAGKIERGIEKYSVLRTLRAIERCDVALLLIDATEGVTAQDTHIAGMVVEAKK 294
Query: 295 SLIVCVNKWDSIIHNQRK--IIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVY 352
LI+ VNKWD+I + ++ +++ F+ +A F+SA+ ++ ++ VY
Sbjct: 295 GLILVVNKWDAIEKDSHTYYAFQDQVREAFKFVDYAPIVFVSALTGQRVSHLLDYAREVY 354
Query: 353 DSSIIHLSTSRITRALISAIKNHPPCR-KKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIG 411
+ TS + L + PP KK +L YA Q PP+ + N + +
Sbjct: 355 VQRQKRVPTSELNNFLREVMLQQPPMAVKKGAHLRLYYAVQPQTEPPVFLFFANDGELVH 414
Query: 412 NDYKRYLE 419
Y RYLE
Sbjct: 415 WSYARYLE 422
>gi|418427616|ref|ZP_13000623.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS2]
gi|387718169|gb|EIK06155.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS2]
Length = 436
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 259/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + DFY LG G P+ IS +G G+ + L+ +++ F ++E
Sbjct: 122 DNMEMRTDVYDFYSLGFGEPYPISGSHGLGLGDLLDAVVS-------HFGEEEEDPYDED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD+I + + Y+ + Y+LIDTAG+
Sbjct: 175 T-IRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKAVVIVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++ ++K+ FL +A F+SA + +++ IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERTRLHTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP V+ N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|345857524|ref|ZP_08809958.1| small GTP-binding domain protein [Desulfosporosinus sp. OT]
gi|344329352|gb|EGW40696.1| small GTP-binding domain protein [Desulfosporosinus sp. OT]
Length = 443
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 267/424 (62%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEG-YIGKKSFIIIDTGGF 60
KPV+ +VGRPNVGKSTLFNR+T A+V N PG+TRDR Y + ++G+K F +IDTGG
Sbjct: 3 KPVVAIVGRPNVGKSTLFNRITGGLVAIVENMPGVTRDRLYRDAEWLGRK-FALIDTGGI 61
Query: 61 E-PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E + I +M +Q + A+ E+D++IF+VD + D+LI LR+SG+P++L N
Sbjct: 62 EFKDEGTPIASQMRRQAEIAMEEADVVIFVVDSQISPTSDDELIARTLRRSGKPVILAAN 121
Query: 120 KSENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNI 177
K E+ DF LG+G ISA++G + L+ ++ LP ++E+
Sbjct: 122 KVEDFEKVEGQLYDFLSLGLGEAIPISAVHGMNTGDLLDMVIW-NLPENN---EEEY--- 174
Query: 178 HSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDT 237
+ I+++++G+PNVGKS+L+N++LG+NRVI + PGTTRD+I + FE+ K YILIDT
Sbjct: 175 -DPDVIRISVIGRPNVGKSSLVNTMLGKNRVIVSNIPGTTRDAIDTPFEHEGKHYILIDT 233
Query: 238 AGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLI 297
AG+RR+ + E+ E++SV+++L+++ ++++++L+DA ++ QD IA + +E+G+++I
Sbjct: 234 AGMRRKARIDELTEQYSVVRSLRAVDRSDMILMLIDAVDGVTEQDKKIAGYAHEAGKAII 293
Query: 298 VCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSS 355
+ VNKWD + +++ I + I+++L+F+ +A FISA +N +E ++ V + +
Sbjct: 294 LIVNKWDLVEKDEKTINVFEKTIREELSFMQYAPTMFISAKTGQRVNKILELVDFVVEQN 353
Query: 356 IIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
++T+ + L + +PP K R K+RY Q G PP V N + + YK
Sbjct: 354 STRVTTATLNTLLREWLHLNPPPSDKGRRLKVRYITQVGVKPPTFVFFVNDPELMHFSYK 413
Query: 416 RYLE 419
RYLE
Sbjct: 414 RYLE 417
>gi|167768008|ref|ZP_02440061.1| hypothetical protein CLOSS21_02551 [Clostridium sp. SS2/1]
gi|317498398|ref|ZP_07956693.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium
5_1_63FAA]
gi|429761254|ref|ZP_19293684.1| ribosome biogenesis GTPase Der [Anaerostipes hadrus DSM 3319]
gi|167710337|gb|EDS20916.1| ribosome biogenesis GTPase Der [Clostridium sp. SS2/1]
gi|291561010|emb|CBL39810.1| ribosome-associated GTPase EngA [butyrate-producing bacterium
SSC/2]
gi|316894292|gb|EFV16479.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium
5_1_63FAA]
gi|429184278|gb|EKY25301.1| ribosome biogenesis GTPase Der [Anaerostipes hadrus DSM 3319]
Length = 440
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 248/422 (58%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN L + ++V + PG+TRDR Y + F +IDTGG E
Sbjct: 3 KPIIAIVGRPNVGKSTLFNALAGEKISIVKDTPGVTRDRIYADVTWLNYQFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ ++ M Q + A+ +D+IIF+ D RQGLV+ D + + LR+SG+PIVL +NK
Sbjct: 63 PDSGDLLLSHMRGQAEIAMETADVIIFLTDVRQGLVDADYQVADMLRRSGKPIVLAVNKV 122
Query: 122 ENINSSI--SLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + + +FY LG+G P +SA G + L+ +L P K+ E
Sbjct: 123 DNYEKFVLDTYEFYNLGLGTPFPVSANSKIGFGDLLDEVLVHCNPQDADEKEDERP---- 178
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+VAI+GKPN GKS+LIN LLGE+R+I D GTTRD+I + + N K+Y+ IDTAG
Sbjct: 179 ----RVAIIGKPNAGKSSLINKLLGEDRLIVSDIAGTTRDAIDTTVKRNGKEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R++ + E IE++SVI+T+ ++ +V IL++DA++ I+ QD IA +E G+ +I+
Sbjct: 235 LRKKARVKEDIERYSVIRTVAAVERCDVAILVIDAEEGITEQDAKIAGIAHERGKGMIIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I N + I K N +++ L+++S+A FISA + + ++ V ++ +
Sbjct: 295 VNKWDLIEKNDKTIYKFTNQVREVLSYMSYAELVFISAKTGQRLPKIFDVLDMVIENHAL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + L A+ P K R KL Y Q PP V+ N + + Y RY
Sbjct: 355 RVQTGVLNEILTEAVAMKQPPSDKGKRLKLYYITQVSVKPPTFVVFINDRQLMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|422416458|ref|ZP_16493415.1| ribosome-associated GTPase EngA [Listeria innocua FSL J1-023]
gi|313623121|gb|EFR93388.1| ribosome-associated GTPase EngA [Listeria innocua FSL J1-023]
Length = 436
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 261/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y K F IIDTGG +
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + ++ Q + AI E+D+IIFI +GR+G+ + D+ + L +S +PIVL INK
Sbjct: 63 LS-DEPFLEQIRAQAEIAIDEADVIIFITNGREGVTDADEQVAKILYRSNKPIVLAINKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G P+ IS +G G+ + L+ + + F K+E +
Sbjct: 122 DNPEMRDQIYDFYSLGFGEPYPISGSHGLGLGDMLDAV-------RAHFPKEE-EEEYPD 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E +K +++G+PNVGKS+++N+LLGE+RVI D GTTRD+I + + ++ + Y++IDTAG+
Sbjct: 174 ETVKFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I ++VV+++++A++ I QD IA + +++GR++I+ V
Sbjct: 234 RKRGKVYESTEKYSVLRAMRAIERSDVVLVVINAEEGIREQDKRIAGYAHDAGRAIIIVV 293
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+I +++ I +I+++ FLS+A F+SA +N+ IN V D+ +
Sbjct: 294 NKWDAINKDEKTINVWTEDIREQFQFLSYAPIVFVSAKTKQRLNNLFPLINQVSDNHSLR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + A+ +P K R K+ Y Q PP V+ N + + Y+R+L
Sbjct: 354 VQSSMLNDVISDAVAMNPSPMDKGKRLKIFYTTQVAVKPPTFVVFVNDPELMHFSYERFL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|16801117|ref|NP_471385.1| GTP-binding protein EngA [Listeria innocua Clip11262]
gi|423098843|ref|ZP_17086551.1| ribosome biogenesis GTPase Der [Listeria innocua ATCC 33091]
gi|26006727|sp|Q92A71.1|DER_LISIN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|16414552|emb|CAC97281.1| lin2051 [Listeria innocua Clip11262]
gi|370794670|gb|EHN62433.1| ribosome biogenesis GTPase Der [Listeria innocua ATCC 33091]
Length = 436
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 157/421 (37%), Positives = 261/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y K F IIDTGG +
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNIIDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + ++ Q + AI E+D+IIFI +GR+G+ + D+ + L +S +PIVL INK
Sbjct: 63 LS-DEPFLEQIRAQAEIAIDEADVIIFITNGREGVTDADEQVAKILYRSNKPIVLAINKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N + DFY LG G P+ IS +G G+ + L+ + + F K+E +
Sbjct: 122 DNPEMRDQIYDFYSLGFGEPYPISGSHGLGLGDMLDAV-------RAHFPKEE-EEEYPD 173
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
E +K +++G+PNVGKS+++N+LLGE+RVI D GTTRD+I + + ++ + Y++IDTAG+
Sbjct: 174 ETVKFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++ +++I ++VV+++++A++ I QD IA + +++GR++I+ V
Sbjct: 234 RKRGKVYESTEKYSVLRAMRAIERSDVVLVVINAEEGIREQDKRIAGYAHDAGRAIIIVV 293
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD+I +++ I +I+++ FLS+A F+SA +N+ IN V D+ +
Sbjct: 294 NKWDAINKDEKTINVWTEDIREQFQFLSYAPIVFVSAKTKQRLNNLFPLINQVSDNHSLR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + A+ +P K R K+ Y Q PP V+ N + + Y+R+L
Sbjct: 354 VQSSMLNDVISDAVAMNPSPMDKGKRLKIFYTTQVAVKPPTFVVFVNDPELMHFSYERFL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|70726437|ref|YP_253351.1| GTP-binding protein EngA [Staphylococcus haemolyticus JCSC1435]
gi|123660249|sp|Q4L6I0.1|DER_STAHJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|68447161|dbj|BAE04745.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 436
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/422 (36%), Positives = 260/422 (61%), Gaps = 14/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQMLYKSKKPVVLAVNKV 121
Query: 122 EN--INSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + + I DFY LG G+P+ IS +G G+ + L+ ++ K F ++ E + +
Sbjct: 122 DNPEMRNDI-FDFYSLGFGDPYPISGSHGLGLGDLLDEVV------KHFDEETE--DSYD 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD++ + + Y+ + Y+LIDTAG
Sbjct: 173 EDTIRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAVDTEYSYDGQDYVLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R++ K +E EK+SV++ LK+I +NVV++++DA++ I QD +A + +E G+++++
Sbjct: 233 MRKKGKVYESTEKYSVLRALKAIERSNVVLIVIDAEEGIIEQDKRVAGYAHEEGKAVVIV 292
Query: 300 VNKWDSI--IHNQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ N K ++++ + FL +A F+SA + + + IN ++
Sbjct: 293 VNKWDTVDKDSNTMKKFADDVRNQFQFLDYAQIAFVSAKEGTRLRTLFPYINEASENHKK 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ +S + + AI +P K R + Y Q PP V+ N ++ + YKRY
Sbjct: 353 RVQSSTLNEVVTDAISMNPTPTDKGRRLNVFYTTQVANEPPTFVVFVNDVELMHFSYKRY 412
Query: 418 LE 419
LE
Sbjct: 413 LE 414
>gi|15924465|ref|NP_371999.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus Mu50]
gi|15927056|ref|NP_374589.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus N315]
gi|21283093|ref|NP_646181.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus MW2]
gi|49483662|ref|YP_040886.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49486314|ref|YP_043535.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650430|ref|YP_186359.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus COL]
gi|88195209|ref|YP_500010.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|148267959|ref|YP_001246902.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus JH9]
gi|150394023|ref|YP_001316698.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus JH1]
gi|151221596|ref|YP_001332418.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979794|ref|YP_001442053.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus Mu3]
gi|221140958|ref|ZP_03565451.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253315982|ref|ZP_04839195.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253732117|ref|ZP_04866282.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733278|ref|ZP_04867443.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006261|ref|ZP_05144862.2| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425539|ref|ZP_05601964.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428198|ref|ZP_05604596.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430828|ref|ZP_05607210.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257433587|ref|ZP_05609945.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
E1410]
gi|257436428|ref|ZP_05612475.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M876]
gi|257795470|ref|ZP_05644449.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9781]
gi|258413278|ref|ZP_05681554.1| small GTP-binding protein [Staphylococcus aureus A9763]
gi|258420615|ref|ZP_05683557.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9719]
gi|258422494|ref|ZP_05685402.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9635]
gi|258426810|ref|ZP_05688030.1| GTP-binding protein engA [Staphylococcus aureus A9299]
gi|258444808|ref|ZP_05693137.1| GTP-binding protein engA [Staphylococcus aureus A8115]
gi|258447358|ref|ZP_05695502.1| small GTP-binding protein [Staphylococcus aureus A6300]
gi|258449757|ref|ZP_05697858.1| GTP-binding protein engA [Staphylococcus aureus A6224]
gi|258451133|ref|ZP_05699168.1| GTP-binding protein engA [Staphylococcus aureus A5948]
gi|258454573|ref|ZP_05702537.1| ribosome-associated GTPase EngA [Staphylococcus aureus A5937]
gi|262048997|ref|ZP_06021876.1| GTP-binding protein EngA [Staphylococcus aureus D30]
gi|262051644|ref|ZP_06023864.1| GTP-binding protein EngA [Staphylococcus aureus 930918-3]
gi|269203100|ref|YP_003282369.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus ED98]
gi|282892972|ref|ZP_06301207.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8117]
gi|282904057|ref|ZP_06311945.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C160]
gi|282905821|ref|ZP_06313676.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282911052|ref|ZP_06318854.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914265|ref|ZP_06322052.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M899]
gi|282919188|ref|ZP_06326923.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C427]
gi|282921722|ref|ZP_06329439.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9765]
gi|282924372|ref|ZP_06332046.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C101]
gi|282928003|ref|ZP_06335612.1| ribosome-associated GTPase EngA [Staphylococcus aureus A10102]
gi|283958239|ref|ZP_06375690.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus A017934/97]
gi|284024473|ref|ZP_06378871.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus 132]
gi|293501290|ref|ZP_06667141.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510252|ref|ZP_06668960.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M809]
gi|293526847|ref|ZP_06671531.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M1015]
gi|295407224|ref|ZP_06817024.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8819]
gi|295427983|ref|ZP_06820615.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296275328|ref|ZP_06857835.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus MR1]
gi|297207866|ref|ZP_06924299.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297244648|ref|ZP_06928531.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8796]
gi|300911951|ref|ZP_07129394.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH70]
gi|304380942|ref|ZP_07363601.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014684|ref|YP_005290920.1| GTP-binding protein Der [Staphylococcus aureus subsp. aureus VC40]
gi|379021189|ref|YP_005297851.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus M013]
gi|384547715|ref|YP_005736968.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ED133]
gi|384862076|ref|YP_005744796.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384864698|ref|YP_005750057.1| small GTP-binding domain protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|384867617|ref|YP_005747813.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH60]
gi|384870016|ref|YP_005752730.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
T0131]
gi|385781699|ref|YP_005757870.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 11819-97]
gi|386729173|ref|YP_006195556.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|386831026|ref|YP_006237680.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387143083|ref|YP_005731476.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|387150616|ref|YP_005742180.1| GTP-binding protein EngA [Staphylococcus aureus 04-02981]
gi|387602748|ref|YP_005734269.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ST398]
gi|404478822|ref|YP_006710252.1| GTPase [Staphylococcus aureus 08BA02176]
gi|415682272|ref|ZP_11447588.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS00]
gi|415693541|ref|ZP_11455320.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS03]
gi|416841186|ref|ZP_11904248.1| GTP-binding protein EngA [Staphylococcus aureus O11]
gi|416847529|ref|ZP_11907211.1| GTP-binding protein EngA [Staphylococcus aureus O46]
gi|417650507|ref|ZP_12300277.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21189]
gi|417651458|ref|ZP_12301221.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21172]
gi|417654332|ref|ZP_12304055.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21193]
gi|417797321|ref|ZP_12444517.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21305]
gi|417800220|ref|ZP_12447344.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21310]
gi|417800795|ref|ZP_12447903.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21318]
gi|417889153|ref|ZP_12533251.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21195]
gi|417889885|ref|ZP_12533964.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21200]
gi|417893012|ref|ZP_12537049.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21201]
gi|417896766|ref|ZP_12540709.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21235]
gi|417898011|ref|ZP_12541937.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21259]
gi|417901590|ref|ZP_12545466.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21266]
gi|417905407|ref|ZP_12549218.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21269]
gi|418277084|ref|ZP_12891765.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21178]
gi|418284125|ref|ZP_12896857.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21202]
gi|418284496|ref|ZP_12897216.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21209]
gi|418307207|ref|ZP_12918934.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21194]
gi|418310327|ref|ZP_12921872.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21331]
gi|418312082|ref|ZP_12923595.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21334]
gi|418316382|ref|ZP_12927820.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21340]
gi|418424621|ref|ZP_12997738.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS1]
gi|418430450|ref|ZP_13003365.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433430|ref|ZP_13006192.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS4]
gi|418437091|ref|ZP_13008890.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS5]
gi|418439957|ref|ZP_13011662.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS6]
gi|418443013|ref|ZP_13014613.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS7]
gi|418446072|ref|ZP_13017548.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS8]
gi|418449020|ref|ZP_13020408.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS9]
gi|418451838|ref|ZP_13023172.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS10]
gi|418454895|ref|ZP_13026155.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457769|ref|ZP_13028971.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418558989|ref|ZP_13123536.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21252]
gi|418562533|ref|ZP_13126990.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21262]
gi|418565367|ref|ZP_13129774.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21264]
gi|418568499|ref|ZP_13132844.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21272]
gi|418570523|ref|ZP_13134790.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21283]
gi|418572830|ref|ZP_13137032.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21333]
gi|418579334|ref|ZP_13143429.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418582339|ref|ZP_13146417.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418600439|ref|ZP_13163903.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21343]
gi|418603309|ref|ZP_13166696.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21345]
gi|418640269|ref|ZP_13202501.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-3]
gi|418645414|ref|ZP_13207539.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-55]
gi|418652938|ref|ZP_13214900.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-99]
gi|418657614|ref|ZP_13219379.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-105]
gi|418662046|ref|ZP_13223600.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-122]
gi|418871252|ref|ZP_13425633.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-125]
gi|418881155|ref|ZP_13435373.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418884008|ref|ZP_13438201.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886738|ref|ZP_13440886.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418889292|ref|ZP_13443425.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1524]
gi|418892141|ref|ZP_13446254.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418898045|ref|ZP_13452115.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418900913|ref|ZP_13454970.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418903715|ref|ZP_13457756.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418906418|ref|ZP_13460444.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418909221|ref|ZP_13463220.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG149]
gi|418912085|ref|ZP_13466066.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG547]
gi|418914573|ref|ZP_13468545.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418917305|ref|ZP_13471264.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418920555|ref|ZP_13474487.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418923088|ref|ZP_13477004.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418925737|ref|ZP_13479639.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928759|ref|ZP_13482645.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418931549|ref|ZP_13485390.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418934382|ref|ZP_13488204.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418947094|ref|ZP_13499484.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-157]
gi|418951524|ref|ZP_13503610.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-160]
gi|418955624|ref|ZP_13507561.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-189]
gi|418978127|ref|ZP_13525928.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|418982417|ref|ZP_13530125.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418986084|ref|ZP_13533770.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1500]
gi|418988480|ref|ZP_13536152.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1835]
gi|418991337|ref|ZP_13538998.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1096]
gi|418994144|ref|ZP_13541779.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG290]
gi|419786030|ref|ZP_14311771.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-M]
gi|424773572|ref|ZP_18200629.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
CM05]
gi|424785311|ref|ZP_18212114.1| GTP-binding protein EngA [Staphylococcus aureus CN79]
gi|440707247|ref|ZP_20887946.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21282]
gi|440734925|ref|ZP_20914536.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus DSM
20231]
gi|443637847|ref|ZP_21121913.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21236]
gi|443638774|ref|ZP_21122807.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21196]
gi|448741639|ref|ZP_21723600.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/314250]
gi|448742923|ref|ZP_21724837.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/Y21]
gi|54037051|sp|P64060.1|DER_STAAN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|54037052|sp|P64061.1|DER_STAAW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|54040975|sp|P64059.1|DER_STAAM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56748972|sp|Q6G988.1|DER_STAAS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|56749026|sp|Q6GGT6.1|DER_STAAR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|71151865|sp|Q5HFU8.1|DER_STAAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|122539535|sp|Q2FYG0.1|DER_STAA8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|166225860|sp|A7X2I1.1|DER_STAA1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|172048892|sp|A6QH24.1|DER_STAAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037164|sp|A6U1U3.1|DER_STAA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|189037165|sp|A5IT03.1|DER_STAA9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|13701274|dbj|BAB42568.1| SA1307 [Staphylococcus aureus subsp. aureus N315]
gi|14247246|dbj|BAB57637.1| GTP-binding protein [Staphylococcus aureus subsp. aureus Mu50]
gi|21204533|dbj|BAB95229.1| MW1364 [Staphylococcus aureus subsp. aureus MW2]
gi|49241791|emb|CAG40482.1| putative GTPase [Staphylococcus aureus subsp. aureus MRSA252]
gi|49244757|emb|CAG43193.1| putative GTPase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57284616|gb|AAW36710.1| GTP-binding protein, Era/TrmE family [Staphylococcus aureus subsp.
aureus COL]
gi|87202767|gb|ABD30577.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741028|gb|ABQ49326.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946475|gb|ABR52411.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus JH1]
gi|150374396|dbj|BAF67656.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721929|dbj|BAF78346.1| hypothetical protein SAHV_1463 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253724164|gb|EES92893.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728818|gb|EES97547.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
TCH130]
gi|257271996|gb|EEV04134.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275039|gb|EEV06526.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278956|gb|EEV09575.1| small GTP-binding protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257281680|gb|EEV11817.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
E1410]
gi|257284710|gb|EEV14830.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M876]
gi|257789442|gb|EEV27782.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9781]
gi|257839842|gb|EEV64310.1| small GTP-binding protein [Staphylococcus aureus A9763]
gi|257843563|gb|EEV67970.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9719]
gi|257847251|gb|EEV71257.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9635]
gi|257849971|gb|EEV73929.1| GTP-binding protein engA [Staphylococcus aureus A9299]
gi|257850301|gb|EEV74254.1| GTP-binding protein engA [Staphylococcus aureus A8115]
gi|257853549|gb|EEV76508.1| small GTP-binding protein [Staphylococcus aureus A6300]
gi|257857005|gb|EEV79905.1| GTP-binding protein engA [Staphylococcus aureus A6224]
gi|257861188|gb|EEV84001.1| GTP-binding protein engA [Staphylococcus aureus A5948]
gi|257862956|gb|EEV85720.1| ribosome-associated GTPase EngA [Staphylococcus aureus A5937]
gi|259160485|gb|EEW45509.1| GTP-binding protein EngA [Staphylococcus aureus 930918-3]
gi|259162929|gb|EEW47492.1| GTP-binding protein EngA [Staphylococcus aureus D30]
gi|262075390|gb|ACY11363.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus ED98]
gi|269940966|emb|CBI49350.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|282313759|gb|EFB44152.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C101]
gi|282316998|gb|EFB47372.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C427]
gi|282322333|gb|EFB52657.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M899]
gi|282324747|gb|EFB55057.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282331113|gb|EFB60627.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282590300|gb|EFB95380.1| ribosome-associated GTPase EngA [Staphylococcus aureus A10102]
gi|282593984|gb|EFB98973.1| ribosome-associated GTPase EngA [Staphylococcus aureus A9765]
gi|282595675|gb|EFC00639.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus C160]
gi|282764969|gb|EFC05094.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8117]
gi|283470686|emb|CAQ49897.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ST398]
gi|283790388|gb|EFC29205.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus A017934/97]
gi|285817155|gb|ADC37642.1| GTP-binding protein EngA [Staphylococcus aureus 04-02981]
gi|290920405|gb|EFD97469.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M1015]
gi|291096295|gb|EFE26556.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 58-424]
gi|291467196|gb|EFF09714.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus M809]
gi|294967937|gb|EFG43966.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8819]
gi|295128341|gb|EFG57975.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296887440|gb|EFH26340.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297178678|gb|EFH37924.1| ribosome-associated GTPase EngA [Staphylococcus aureus A8796]
gi|298694764|gb|ADI97986.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
ED133]
gi|300886197|gb|EFK81399.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751305|gb|ADL65482.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304340528|gb|EFM06463.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312438122|gb|ADQ77193.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus TCH60]
gi|312829865|emb|CBX34707.1| small GTP-binding domain protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315129191|gb|EFT85186.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS03]
gi|315195372|gb|EFU25759.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
CGS00]
gi|323439522|gb|EGA97243.1| GTP-binding protein EngA [Staphylococcus aureus O11]
gi|323442239|gb|EGA99870.1| GTP-binding protein EngA [Staphylococcus aureus O46]
gi|329314151|gb|AEB88564.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
T0131]
gi|329723199|gb|EGG59730.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21189]
gi|329727642|gb|EGG64098.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21172]
gi|329731317|gb|EGG67683.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21193]
gi|334266813|gb|EGL85283.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21305]
gi|334271686|gb|EGL90069.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21310]
gi|334277675|gb|EGL95899.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21318]
gi|341840032|gb|EGS81552.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21235]
gi|341843683|gb|EGS84905.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21269]
gi|341845429|gb|EGS86631.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21266]
gi|341849513|gb|EGS90656.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21259]
gi|341852610|gb|EGS93497.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21195]
gi|341855578|gb|EGS96422.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21200]
gi|341856377|gb|EGS97216.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
21201]
gi|359830498|gb|AEV78476.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus M013]
gi|364522688|gb|AEW65438.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365164989|gb|EHM56819.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21202]
gi|365173356|gb|EHM63924.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21209]
gi|365173874|gb|EHM64308.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21178]
gi|365237067|gb|EHM77934.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21331]
gi|365239204|gb|EHM80026.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21334]
gi|365241066|gb|EHM81821.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21340]
gi|365245887|gb|EHM86489.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21194]
gi|371973637|gb|EHO90985.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21262]
gi|371974036|gb|EHO91378.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21264]
gi|371976339|gb|EHO93629.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21252]
gi|371979327|gb|EHO96560.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21272]
gi|371983762|gb|EHP00902.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21333]
gi|371983999|gb|EHP01130.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21283]
gi|374363381|gb|AEZ37486.1| GTP-binding protein Der [Staphylococcus aureus subsp. aureus VC40]
gi|374393124|gb|EHQ64439.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21345]
gi|374394380|gb|EHQ65667.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21343]
gi|375014833|gb|EHS08504.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-3]
gi|375020860|gb|EHS14371.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-99]
gi|375023482|gb|EHS16938.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-55]
gi|375030350|gb|EHS23668.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-105]
gi|375036991|gb|EHS30045.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-122]
gi|375368721|gb|EHS72629.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-125]
gi|375370710|gb|EHS74508.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-189]
gi|375372497|gb|EHS76235.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-160]
gi|375376859|gb|EHS80368.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-157]
gi|377697361|gb|EHT21716.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377703381|gb|EHT27697.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704698|gb|EHT29007.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377705902|gb|EHT30206.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377710749|gb|EHT34987.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377714343|gb|EHT38544.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377714831|gb|EHT39030.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377717573|gb|EHT41748.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377722342|gb|EHT46468.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG547]
gi|377723459|gb|EHT47584.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725691|gb|EHT49804.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377730435|gb|EHT54502.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377731345|gb|EHT55401.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377735047|gb|EHT59083.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377738671|gb|EHT62680.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742730|gb|EHT66715.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377743941|gb|EHT67919.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG290]
gi|377744806|gb|EHT68783.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377750479|gb|EHT74417.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377752627|gb|EHT76546.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG149]
gi|377752800|gb|EHT76718.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIG1524]
gi|377758075|gb|EHT81963.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377761080|gb|EHT84956.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|377763323|gb|EHT87179.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377764281|gb|EHT88134.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC348]
gi|377770476|gb|EHT94237.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus CIGC128]
gi|379993743|gb|EIA15188.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|383361331|gb|EID38705.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus IS-M]
gi|384230466|gb|AFH69713.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|385196418|emb|CCG16046.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387718419|gb|EIK06389.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719829|gb|EIK07760.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS1]
gi|387725430|gb|EIK13046.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS4]
gi|387727392|gb|EIK14908.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS5]
gi|387730578|gb|EIK17956.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS6]
gi|387736000|gb|EIK23110.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS8]
gi|387737029|gb|EIK24110.1| GTPase Der [Staphylococcus aureus subsp. aureus VRS7]
gi|387737275|gb|EIK24349.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus VRS9]
gi|387744719|gb|EIK31483.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745387|gb|EIK32145.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746974|gb|EIK33691.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402347211|gb|EJU82257.1| ribosome biogenesis GTPase Der [Staphylococcus aureus subsp. aureus
CM05]
gi|404440311|gb|AFR73504.1| putative GTPase [Staphylococcus aureus 08BA02176]
gi|421956721|gb|EKU09050.1| GTP-binding protein EngA [Staphylococcus aureus CN79]
gi|436431020|gb|ELP28374.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436506003|gb|ELP41842.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21282]
gi|443404884|gb|ELS63501.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21236]
gi|443408608|gb|ELS67126.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus 21196]
gi|445547606|gb|ELY15871.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/314250]
gi|445563610|gb|ELY19767.1| ribosome-associated GTPase EngA [Staphylococcus aureus KT/Y21]
Length = 436
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 258/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + DFY LG G P+ IS +G G+ + L+ +++ F ++E
Sbjct: 122 DNMEMRTDVYDFYSLGFGEPYPISGSHGLGLGDLLDAVVS-------HFGEEEEDPYDED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD+I + + Y+ + Y+LIDTAG+
Sbjct: 175 T-IRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKAVVIVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++ ++K+ FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERTRLRTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP V+ N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|228475961|ref|ZP_04060669.1| ribosome-associated GTPase EngA [Staphylococcus hominis SK119]
gi|314936392|ref|ZP_07843739.1| ribosome-associated GTPase EngA [Staphylococcus hominis subsp.
hominis C80]
gi|418620058|ref|ZP_13182869.1| ribosome-associated GTPase EngA [Staphylococcus hominis VCU122]
gi|228269784|gb|EEK11264.1| ribosome-associated GTPase EngA [Staphylococcus hominis SK119]
gi|313655011|gb|EFS18756.1| ribosome-associated GTPase EngA [Staphylococcus hominis subsp.
hominis C80]
gi|374823621|gb|EHR87616.1| ribosome-associated GTPase EngA [Staphylococcus hominis VCU122]
Length = 436
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 260/422 (61%), Gaps = 14/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRVVGERVSIVEDTPGVTRDRIYSSGEWLTHEFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQLLYKSKKPVVLAVNKV 121
Query: 122 EN--INSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N + S I DFY LG G+P+ IS +G G+ + L+ ++ K FK+++ ++ +
Sbjct: 122 DNPEMRSDI-FDFYSLGFGDPYPISGSHGLGLGDLLDEVV-------KHFKEED-SDPYD 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ I+++I+G+PNVGKS+L+N++LGE RVI + GTTRD++ + + Y+ + Y+LIDTAG
Sbjct: 173 DDIIRLSIIGRPNVGKSSLVNAILGEERVIVSNVAGTTRDAVDTEYSYDGQDYVLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R++ K +E EK+SV++ LK+I +NVV+L++DA++ I QD +A + +E G+++++
Sbjct: 233 MRKKGKVYESTEKYSVLRALKAIERSNVVLLVIDAEEGIIEQDKRVAGYAHEEGKAMVIV 292
Query: 300 VNKWDSIIH--NQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD++ N K ++++ + FL +A F+SA + + + I ++
Sbjct: 293 VNKWDAVEKDTNTMKKFADDVRNQFQFLDYAPIAFVSAKERLRLKTLFPYIREASENHKK 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ +S + + AI +P K R + Y Q PP V+ N ++ + YKRY
Sbjct: 353 RVQSSTLNEVVTDAISMNPTPTDKGRRLNVFYTTQVAIEPPTFVVFVNDVELMHFSYKRY 412
Query: 418 LE 419
LE
Sbjct: 413 LE 414
>gi|406980534|gb|EKE02122.1| hypothetical protein ACD_20C00425G0019 [uncultured bacterium]
Length = 444
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 251/423 (59%), Gaps = 14/423 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST NRL SR+++V + PG+TRDR Y K F +IDTGG
Sbjct: 4 KPIVAIVGRPNVGKSTFVNRLLGSRESIVDDMPGVTRDRLYFNVEWAGKDFTVIDTGGIV 63
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P V+ IM + Q + A E+D+IIF+VDG++GL D + N LRKS +PI L +NK
Sbjct: 64 PGVEDEIMMSIYTQVEIATEEADVIIFMVDGKEGLNPVDIDVANLLRKSEKPIFLTVNKI 123
Query: 122 E-NINSSISLDFYELGIGNPHIISALYGNG-IKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ +S+ DFY LGIG+P+ +S+++G G + + L++I+ +P F +E +H
Sbjct: 124 DVPEKTSLIADFYALGIGDPYPVSSMHGTGGVGDLLDDIVK-AIP--DFVSDEETKPVH- 179
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+AIVG+PN GKS+L+NSLLGE RVI + GTTRD+I + + Y L+DTAG
Sbjct: 180 -----LAIVGRPNAGKSSLVNSLLGEERVIVSEVAGTTRDAINTNLCVDGNCYTLVDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+ + IEKFSV +++K+I E++V +L++DA + I+ QD I ++GR +++
Sbjct: 235 IRRKARVEYGIEKFSVARSIKAIRESDVTLLIIDATEGITDQDKKIGEISNDAGRGIVIV 294
Query: 300 VNKWDSIIHNQRKIIKN---NIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD I I I+ + LSFA FISA+ I ++ Y+ S
Sbjct: 295 VNKWDLIEDKHSTTINEFTKTIRSEAPHLSFAPIIFISALTKQRITKIFPAVLEAYEYSH 354
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++TS + + ++ A +PP K+ R K Y+ Q G P V+ N K + + Y R
Sbjct: 355 KKITTSLLNKVILEAFALNPPTSKQGKRVKAFYSTQVGVQAPTFVVFVNDTKLMSDSYLR 414
Query: 417 YLE 419
YLE
Sbjct: 415 YLE 417
>gi|363893307|ref|ZP_09320444.1| ribosome-associated GTPase EngA [Eubacteriaceae bacterium CM2]
gi|402838428|ref|ZP_10886935.1| ribosome-associated GTPase EngA [Eubacteriaceae bacterium OBRC8]
gi|361961405|gb|EHL14606.1| ribosome-associated GTPase EngA [Eubacteriaceae bacterium CM2]
gi|402272905|gb|EJU22116.1| ribosome-associated GTPase EngA [Eubacteriaceae bacterium OBRC8]
Length = 440
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 250/422 (59%), Gaps = 11/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MK + +VGRPNVGKSTLFNRL R ++V + PG+TRDR + + SF +IDTGG
Sbjct: 1 MKKTVAIVGRPNVGKSTLFNRLVGERISIVEDTPGVTRDRIFADVSWLNYSFTLIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + I M KQ + AI +D+I+F+VDG+ GLV QD + + LRKS +P+++++NK
Sbjct: 61 ETDTDNLIPEMMRKQAQIAIDMADVIMFVVDGKAGLVPQDFEVADLLRKSKKPVIVIVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N DFY+LG N + IS+ G G+ + L+ I+ + F K+E +
Sbjct: 121 VDNSRLPDDYYDFYQLGFDNMYAISSTQGLGLGDMLDEIVAL-------FPKEELLEVED 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAI+GKPN GKS+++N+L+GE R I GTTRD+I N Y IDTAG
Sbjct: 174 -NSIKVAIIGKPNAGKSSILNALIGEERTIVSPIAGTTRDAIDEKCNINGIDYTFIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR++NK ++ IEK+SV++ +I +A+VV++++DA ++ QD IA +E+G+ +IV
Sbjct: 233 IRKKNKIYDNIEKYSVLRAYSAIEKADVVLVVIDATTMVTEQDTKIAGLAHEAGKCVIVV 292
Query: 300 VNKWDSIIH--NQRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I N + ++++ L ++ +A FISA +N+ +E IN VY+S
Sbjct: 293 VNKWDLIQKETNTMRDYTSDVRNSLAYMQYAPVEFISAKTGKRLNNIVELINKVYESGRK 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
LST + + A+ + P K R K+ YA Q G PP VI N + Y+RY
Sbjct: 353 RLSTGVLNDVIGDAVMLNQPPSDKGKRLKIYYATQTGVLPPTFVIFINDKELFHFSYQRY 412
Query: 418 LE 419
LE
Sbjct: 413 LE 414
>gi|408423615|emb|CCJ11026.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408425605|emb|CCJ12992.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408427593|emb|CCJ14956.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408429581|emb|CCJ26746.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408431568|emb|CCJ18883.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408433562|emb|CCJ20847.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408435554|emb|CCJ22814.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
gi|408437538|emb|CCJ24781.1| GTPase Der [Staphylococcus aureus subsp. aureus ST228]
Length = 436
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 258/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIGEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + DFY LG G P+ IS +G G+ + L+ +++ F ++E
Sbjct: 122 DNMEMRTDVYDFYSLGFGEPYPISGSHGLGLGDLLDAVVS-------HFGEEEEDPYDED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD+I + + Y+ + Y+LIDTAG+
Sbjct: 175 T-IRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKAVVIVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++ ++K+ FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERTRLRTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP V+ N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|310827223|ref|YP_003959580.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308738957|gb|ADO36617.1| hypothetical protein ELI_1631 [Eubacterium limosum KIST612]
Length = 439
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 253/422 (59%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR + F +IDTGG E
Sbjct: 3 KPIVAVVGRPNVGKSTLFNKLVGERIAIVEDTPGVTRDRIIADAEWQNHHFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK- 120
P K I+ +M Q + AI +D+I+ +VDGR+G+ D + N +RK + ++L +NK
Sbjct: 63 PHTKDDILLQMRVQAELAIDMADLIVLLVDGREGMTASDLEVANMIRKHSKNVLLAVNKV 122
Query: 121 -SENINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
S+ + ++I +FY LGIG P ISA G G+ +FL+ ++ KK + + +
Sbjct: 123 DSQQLENNI-FEFYNLGIGEPIAISAEQGLGLGDFLDEVIE---RVKKVYDE----DAQE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ +K+A++GKPN GKSTLIN ++G +R+I D PGTTRD+I + +N + Y LIDTAG
Sbjct: 175 DDNLKIAVIGKPNAGKSTLINKMVGHDRLIVSDVPGTTRDAIDTEVRFNGRDYTLIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+R++ K +E IE++S+++ + ++ ++VV++L+D ++ ++ QD IA + + I+
Sbjct: 235 LRKKKKIYEDIERYSIVRAIAAVDRSDVVLVLIDGEKGVTEQDAKIAGIAHNRSKPSIII 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + + + + +K I+ L+F+ +A FISA ++ E+I+ V +
Sbjct: 295 VNKWDIVEKDTKTMDKMKREIRDTLSFIDYAPILFISAKTGQRVSKIYETIDFVKSQTEK 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T ++ A+ I P K R K+ YA Q G NPP V+ N + Y+RY
Sbjct: 355 RITTGKLNEAMTEFIMMKQPPTKSGRRLKIFYASQTGVNPPTFVVFVNDATLMHFSYQRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|170757031|ref|YP_001782064.1| GTP-binding protein EngA [Clostridium botulinum B1 str. Okra]
gi|429245957|ref|ZP_19209322.1| GTP-binding protein Der [Clostridium botulinum CFSAN001628]
gi|229710728|sp|B1IIN2.1|DER_CLOBK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|169122243|gb|ACA46079.1| ribosome-associated GTPase EngA [Clostridium botulinum B1 str.
Okra]
gi|428757015|gb|EKX79522.1| GTP-binding protein Der [Clostridium botulinum CFSAN001628]
Length = 439
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 250/421 (59%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y E F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVQDTPGVTRDRIYAEAEWLNYKFTMIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + I+ +M +Q + AI +++IIF+VDG++GL D+ + LRKS +P+VLV+NK
Sbjct: 63 PESEDIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVAQMLRKSKKPVVLVVNKI 122
Query: 122 ENI-NSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+ + + + + +FY LGIG+P IS+ G+ + L+ ++ ++FK E
Sbjct: 123 DKLKDENNAYEFYNLGIGDPVTISSSQALGLGDMLDRVV-------EYFKDDELDGEEDE 175
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I +A +GKPNVGKS+LIN LLGE R+I D PGTTRDSI S + ++ LIDTAG+
Sbjct: 176 R-INIAFIGKPNVGKSSLINKLLGEERLIVSDIPGTTRDSIDSYVDTEFGEFTLIDTAGL 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR++K E IE++SVI+T SI A+V IL++DA + IS QD I + ++ ++++V V
Sbjct: 235 RRKSKVKEEIERYSVIRTYASIERADVCILMIDATEGISEQDQKIIGYAHDINKAILVIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + + + + K +K L+F+ +A + FISA + +++ YD+
Sbjct: 295 NKWDLVEKDDKTMDKFKKELKVNLSFMPYAKYLFISAKTGQRVVKVLQTAKECYDNYTKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + AI P R K+ Y Q G PP + N I Y+RYL
Sbjct: 355 VKTGVLNDVISQAIMMKEPPIVGTKRLKIYYVTQIGTKPPTFIFFVNDPACIHFSYQRYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|365157682|ref|ZP_09353933.1| GTPase Der [Bacillus smithii 7_3_47FAA]
gi|363623053|gb|EHL74184.1| GTPase Der [Bacillus smithii 7_3_47FAA]
Length = 436
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 264/423 (62%), Gaps = 16/423 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y F IIDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIVGERISIVEDVPGVTRDRIYSSAEWLTHEFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ + ++ +Q + AI E+D+IIF+ +GR+G+ D+ + L +S +P+VL +NK
Sbjct: 63 IG-DEPFLEQIRQQAEIAIDEADVIIFLTNGREGVTAADEEVAKILYRSNKPVVLAVNKI 121
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFK--KKEFTNIH 178
+N + + DFY LG G P IS +G G+ + L+ ++ K+F K K+E+ +
Sbjct: 122 DNPDMRDVIYDFYALGFGEPFPISGAHGLGLGDLLDEVV------KRFPKSSKQEYDD-- 173
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ IK ++G+PNVGKS+L+N++LGE+RVI D GTTRD++ S + YN +KY++IDTA
Sbjct: 174 --DVIKFCLIGRPNVGKSSLVNAILGEDRVIVSDVAGTTRDAVDSPYTYNGQKYVIIDTA 231
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G++++ K +E EK+SV++ L++I ++VV+++L+A++ I QD IA + +E+G+ +++
Sbjct: 232 GMKKKGKVYESTEKYSVLRALRAIERSDVVLVVLNAEEGIREQDKKIAGYAHEAGKGIVI 291
Query: 299 CVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD++ +++ + + I+ FL +A F+SA +++ + IN V ++
Sbjct: 292 VVNKWDAVEKDEKTMNEFEKKIRSHFLFLDYAPIVFVSAKTKKRLHTLLPVINMVSENHA 351
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ + +S + ++ A+ +P + R K+ YA Q PP IVI N + + Y+R
Sbjct: 352 MRVQSSVLNDVIMDAVAMNPTPTENQRRLKIFYATQVAVKPPTIVIFVNDPELMHFSYER 411
Query: 417 YLE 419
+LE
Sbjct: 412 FLE 414
>gi|126640577|ref|YP_001083561.1| GTP-binding protein EngA [Acinetobacter baumannii ATCC 17978]
Length = 399
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 237/350 (67%), Gaps = 9/350 (2%)
Query: 72 MTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSENINSSISL- 130
M +Q+K AI E+DIIIF+VD R GL+ D+ I LR G+ I LV NK + +++ +L
Sbjct: 1 MAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANKVDGVHAEAALV 60
Query: 131 DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIEY-IKVAIVG 189
+FY+LG+G P ++A +G G++ LE++L ++P + E H + +++AI+G
Sbjct: 61 EFYKLGMGEPLQVAASHGRGVQQMLEDVLQ-DIP------EDENPEEHDKDTGLRLAIIG 113
Query: 190 KPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIRRRNKTFEV 249
+PNVGKSTL+N LLGE+RV+ +D PGTTRDSI FE +KY LIDTAG+RR+ K E+
Sbjct: 114 RPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTAGVRRKGKVDEM 173
Query: 250 IEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVNKWDSIIHN 309
IEKFS++KTL+++ +A+VV++++DA++ I QD+++ + E+GR++++ +NKWD++
Sbjct: 174 IEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVIAINKWDNMSEY 233
Query: 310 QRKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHLSTSRITRALI 369
RK K +++++ +F+ +A + ISA+ + SI+ Y+S+ + +S +++T+ L
Sbjct: 234 DRKQCKLDVERRFDFIPWARIHLISALHGTGVGELYPSIHRAYESANLKVSPAKLTQILN 293
Query: 370 SAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
A H P + R K+RYAH GG+NPP IVIHGN++ DY+RYLE
Sbjct: 294 DATDQHQPPTVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLE 343
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 16/167 (9%)
Query: 5 LVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEPEV 64
L ++GRPNVGKSTL NRL + + PG TRD Y + + +IDT G
Sbjct: 109 LAIIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTAGVR--- 165
Query: 65 KKGIMHEMTK-----QTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
+KG + EM + +T QA+ ++ +++ +VD R+G+VEQD + + ++G+ +V+ IN
Sbjct: 166 RKGKVDEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVIAIN 225
Query: 120 KSENINS----SISLD----FYELGIGNPHIISALYGNGIKNFLENI 158
K +N++ LD F + H+ISAL+G G+ +I
Sbjct: 226 KWDNMSEYDRKQCKLDVERRFDFIPWARIHLISALHGTGVGELYPSI 272
>gi|220917392|ref|YP_002492696.1| GTP-binding protein EngA [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955246|gb|ACL65630.1| small GTP-binding protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 465
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 243/431 (56%), Gaps = 14/431 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ LVGRPNVGKSTLFNRL R A+V + PG+TRDR+Y + ++ ++DTGGFE
Sbjct: 5 RPVVALVGRPNVGKSTLFNRLAGRRVAIVEDVPGVTRDRNYADVIWEGRAVSVVDTGGFE 64
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE + +M ++ +Q + A+ E+ ++ +VDGR GL D+ + + LR++G+P+ + +NK
Sbjct: 65 PESRDRLMSQVREQAQLAVDEASAVVLVVDGRDGLTALDRNVADLLRRAGKPLFVAVNKV 124
Query: 122 ENINSSISL---DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKK---KEFT 175
+ + + +FY LG G H +SA +G G+ ++ I+ E
Sbjct: 125 DTARTEEDVPLAEFYGLGFGEVHAVSAEHGRGVSGLVDAIVEKLALPPLPPAPEEADEPQ 184
Query: 176 NIHSIEY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKK 231
+ E I++AIVG+PNVGKST +N+LLGE R + D PGTTRD+I SL + ++
Sbjct: 185 EVSEAERPVGDIRLAIVGRPNVGKSTFVNALLGEERFVVSDVPGTTRDAIDSLVAHKGRR 244
Query: 232 YILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYE 291
+++ DTAGIRR+ + +E FSV++ +K++ +A VV LLDA + QD + + E
Sbjct: 245 FVVTDTAGIRRKRSIAQKVESFSVVRAMKAMDQAEVVACLLDATEAGVEQDARLLGLVAE 304
Query: 292 SGRSLIVCVNKWDSIIHNQ---RKIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESI 348
G++L++ VNKWD I + + + + K+L F+ FA F+SA + ++ +E
Sbjct: 305 KGKALVIVVNKWD-IAEREGATQDWYRKELTKRLPFVGFAPMLFVSAKERRGVHRVLEKA 363
Query: 349 NHVYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLK 408
+ + T ++ L + HP + R KL Y Q PP VI N
Sbjct: 364 ARLVEQYRARFPTPQLNELLEALQDEHPAPIARGRRVKLYYVAQVAYAPPTFVIQANHPD 423
Query: 409 YIGNDYKRYLE 419
+ + Y+RY+E
Sbjct: 424 GLTDHYRRYIE 434
>gi|282916742|ref|ZP_06324500.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus D139]
gi|282319229|gb|EFB49581.1| ribosome-associated GTPase EngA [Staphylococcus aureus subsp.
aureus D139]
Length = 436
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 257/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + DFY LG G P+ IS +G G+ + L+ +++ F ++E
Sbjct: 122 DNMEMRTDVYDFYSLGFGEPYPISGSHGLGLGDLLDAVVS-------HFGEEEEDPYDED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD+I + + Y + Y+LIDTAG+
Sbjct: 175 T-IRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYEGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKAVVIVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++ ++K+ FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERTRLRTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP V+ N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|387929551|ref|ZP_10132228.1| GTP-binding protein Der [Bacillus methanolicus PB1]
gi|387586369|gb|EIJ78693.1| GTP-binding protein Der [Bacillus methanolicus PB1]
Length = 436
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/429 (37%), Positives = 256/429 (59%), Gaps = 28/429 (6%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF- 60
KPV+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y F IIDTGG
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRIAGERISIVEDIPGVTRDRIYSSAEWLTHDFNIIDTGGID 62
Query: 61 ---EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLV 117
EP + ++ +Q + AI E+D+IIFI +GR+G+ D+ + L KS +P+VL
Sbjct: 63 IGDEP-----FLEQIRQQAEIAIDEADVIIFITNGREGVTAADEEVAKILYKSKKPVVLA 117
Query: 118 INKSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTN 176
+NK +N + DFY LG G P IS +G G+ + L+ + K F +
Sbjct: 118 VNKVDNPEMRDQIYDFYSLGFGEPIPISGTHGLGLGDLLDEV------------AKHFPS 165
Query: 177 IHSIEY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKY 232
H +Y IK +++G+PNVGKS+L+N+LLGE RVI D GTTRD+I S + YN +KY
Sbjct: 166 RHDEDYEEDVIKFSLIGRPNVGKSSLVNALLGEERVIVSDIAGTTRDAIDSHYTYNGQKY 225
Query: 233 ILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYES 292
++IDTAG+R++ K +E EK+SV++ L++I ++VV+++L+ ++ I QD IA + +E+
Sbjct: 226 VIIDTAGMRKKGKVYETTEKYSVLRALRAIERSDVVLVVLNGEEGIIEQDKRIAGYAHEA 285
Query: 293 GRSLIVCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINH 350
GR++++ VNKWD++ +++ + + NI+ FL +A F+SA +++ + IN
Sbjct: 286 GRAVVIVVNKWDAVEKDEKTMNEFEKNIRDHFQFLDYAPIVFLSAKTKKRLHTLLPMINM 345
Query: 351 VYDSSIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYI 410
++ + + TS + ++ A+ +P K R K+ Y Q PP V+ N + +
Sbjct: 346 ASENHALRVETSVLNDVIMDAVAMNPTPTDKGRRLKIYYTTQVAVKPPTFVVFVNDPELM 405
Query: 411 GNDYKRYLE 419
Y+R+LE
Sbjct: 406 HFSYERFLE 414
>gi|379720895|ref|YP_005313026.1| protein EngA [Paenibacillus mucilaginosus 3016]
gi|378569567|gb|AFC29877.1| EngA [Paenibacillus mucilaginosus 3016]
Length = 440
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 256/425 (60%), Gaps = 19/425 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ + A+V + PG+TRDR YG G + F IIDTGG E
Sbjct: 3 RPVIAIVGRPNVGKSTIFNRIIGDKLAIVEDKPGVTRDRLYGRGEWLDQEFSIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
E + I+ + Q + AI E+D+IIF+VD + G+ D + L +S +P+V+ +NK
Sbjct: 63 IEGEDHILRSVRVQAELAIEEADVIIFMVDAKAGVTPADSEVAQILFRSQKPVVVAVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + + +FY +G G IS +G GI + LE ++ K F +
Sbjct: 123 DNLQRADDIYEFYSMGFGEIVGISGAHGTGIGDLLEEVV------------KHFPDTVDE 170
Query: 181 EY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
EY I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + +KY++ID
Sbjct: 171 EYGEDVIRVALIGRPNVGKSSLVNAILGEERVIVSDMAGTTRDAIDTPFEKDGQKYVIID 230
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K +E EK+SV++ +K+I A+VV++++D + I QD ++A + +E+G++
Sbjct: 231 TAGMRKRGKVYENTEKYSVMRAMKAIERADVVLVVIDGEVGIIEQDKHVAGYAHEAGKAA 290
Query: 297 IVCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
+ VNKWD + +++ + + I+ F+++A F+SA ++ + +N V ++
Sbjct: 291 VFVVNKWDVVEKDEKTMHQFEQKIRDHFLFMTYAPVVFLSAKTKQRLHKLLPVVNTVSEA 350
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ + T + + A+ +PP K R ++ YA Q PP I+ N + + Y
Sbjct: 351 HAMRIPTHVLNDVVSDAVAINPPPTDKGRRMRINYATQVAVKPPTIIFFVNDPELMHFSY 410
Query: 415 KRYLE 419
+RYL+
Sbjct: 411 QRYLD 415
>gi|358063993|ref|ZP_09150588.1| GTP-binding protein engA [Clostridium hathewayi WAL-18680]
gi|356697779|gb|EHI59344.1| GTP-binding protein engA [Clostridium hathewayi WAL-18680]
Length = 442
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 255/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + ++V + PG+TRDR Y + +F +IDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNVIAGDTISIVKDTPGVTRDRIYADCTWLDMNFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ I+ +M +Q + AI +D+IIFIVD RQGLV+ D + + LRKS +P+VL +NK
Sbjct: 63 PDTNDIILSQMREQAEIAIATADVIIFIVDVRQGLVDADFRVADMLRKSKKPMVLAVNKV 122
Query: 122 ENIN--SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ + +FY LG+G+P +SA GI + L+ + K F ++ +
Sbjct: 123 DSFQKFGNDIYEFYNLGLGDPIAVSAASRLGIGDLLDEV-------AKHFDMEQVED-EE 174
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E ++A+VGKPNVGKS++IN L+GENRVI + GTTRD++ + +N +Y+ IDTAG
Sbjct: 175 DERPRIAVVGKPNVGKSSIINKLIGENRVIVSNIAGTTRDAVDTEVVHNGTEYVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+NK E +E++S+I+T+ ++ A+VV++++DA + ++ QD IA +E G+ +I+
Sbjct: 235 LRRKNKIKEELERYSIIRTVTAVERADVVVVVIDASEGVTEQDAKIAGIAHERGKGVIIA 294
Query: 300 VNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I + ++ L+F+ +A FISA+ +N E+I+ V ++ +
Sbjct: 295 VNKWDAIEKNDKTIYEFTRKVRDTLSFMQYAEIIFISALTGQRLNKLFETIDMVRENQTL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A+ P K R +L Y Q PP VI N + + Y RY
Sbjct: 355 RVQTGVLNEIMTEAVALQQPPSDKGKRLRLYYITQVAVKPPTFVIFVNDKELMHFSYTRY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|366166680|ref|ZP_09466435.1| GTP-binding protein Der [Acetivibrio cellulolyticus CD2]
Length = 440
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 248/422 (58%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST FN L R ++V + PG+TRDR Y E + F +IDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTFFNYLAGRRISIVEDTPGVTRDRIYTEVEWRNRKFTLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P + IM +M Q + AI +++I+F+VD + GL D + LRKS +P++LV+NK
Sbjct: 63 PYSEDKIMQQMKSQAEIAIETANVIVFMVDRKDGLTASDNEVATLLRKSKKPVILVVNKV 122
Query: 122 ENINS--SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ + + +FY LGIG+ +S+++G G+ + L+ I YK F + E
Sbjct: 123 DRVGELPAEVYEFYNLGIGDLMTVSSIHGLGMGDLLDEI------YKYFPDETEEEYDEE 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IKVA++GKPN GKS+LIN +LGE+RVI D PGTTRD+I + E K++ IDTAG
Sbjct: 177 V--IKVAVIGKPNAGKSSLINKVLGEDRVIVSDIPGTTRDAIDTYVENEEGKFVFIDTAG 234
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR++K E IE++S I++ +I A+V ++++DA++ ++ QD IA + +E G++ IV
Sbjct: 235 IRRQSKINENIERYSTIRSWTAIERADVCLIMIDAEEGVTEQDTKIAGYAHEQGKASIVV 294
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD + N + + + +KL F+ +A FISA +N E V + S +
Sbjct: 295 VNKWDLVEKNTGTLEEYRKTVLEKLGFMLYAPVMFISAKSGQRVNKVFELTKFVANQSAL 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST + L A P K R K+ Y Q PP V+ N ++ + Y+RY
Sbjct: 355 RVSTGVLNDLLNEATAMVQPPSDKGKRLKIYYMTQASVKPPTFVLFINSIELMHYSYERY 414
Query: 418 LE 419
LE
Sbjct: 415 LE 416
>gi|384550236|ref|YP_005739488.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302333085|gb|ADL23278.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 436
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 257/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + DFY LG G P+ IS +G G+ + L+ +++ F ++E
Sbjct: 122 DNMEMRTDVYDFYSLGFGEPYPISGSHGLGLGDLLDAVVS-------HFGEEEEDPYDED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD+I + + Y+ + Y+LIDTAG+
Sbjct: 175 T-IRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKAVVTVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++ ++K+ FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERTRLRTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP V+ N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|373494774|ref|ZP_09585373.1| GTP-binding protein engA [Eubacterium infirmum F0142]
gi|371967818|gb|EHO85286.1| GTP-binding protein engA [Eubacterium infirmum F0142]
Length = 439
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 258/424 (60%), Gaps = 18/424 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+P++ +VGRPNVGKST FN++ R ++V + PG+TRDR Y E F +IDTGG E
Sbjct: 3 RPIVAVVGRPNVGKSTFFNKIVGRRVSIVEDTPGVTRDRIYAEAEWNGIKFDLIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ K I+ +M +Q + A+ +D+I+FIVDG+ G+ D+ + LR++G+ I+L++NK
Sbjct: 63 PDSKDIILSQMREQAQMAMDMADVILFIVDGKDGITTADEEVAGMLRRTGKKIILLVNKI 122
Query: 122 ENINSSIS--LDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N DFY LG+G P IS++ + + L++I+ P K+
Sbjct: 123 DNPRKIPDNFYDFYALGLGEPIPISSVNMLNLGDVLDDIVK-SFPDNKY---------EE 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+ IKV+++GKPNVGKS+LIN+L+ +NRVI GTTRD+I + FE+ KY+LIDTAG
Sbjct: 173 TDDIKVSVIGKPNVGKSSLINALVNDNRVIVSPIAGTTRDAIDTPFEWEENKYLLIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR++K E IE++SVI+++ +I +V ++L+DA++ ++ QD IA +E+G+ ++V
Sbjct: 233 IRRKSKVNEDIERYSVIRSIAAIERCDVCLVLIDAEEGLTEQDKKIAGEAHEAGKGIVVV 292
Query: 300 VNKWDSIIHNQRKIIKN---NIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD ++H + +++ I+ +L F+S+A FISA+K + M + V +
Sbjct: 293 VNKWD-LVHKETNTMRDYRRKIESELLFMSYAPVIFISALKKERLGEVMAMVKFVAEKRA 351
Query: 357 IHLSTSRITRALISAI-KNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ + T ++ + A+ N PP K R K+ YA Q G PP+ N + + Y
Sbjct: 352 LRVPTGQLNSLIADAVLMNQPPADKGK-RLKVYYATQIGVKPPLFAFSINDRELMHFSYA 410
Query: 416 RYLE 419
RYLE
Sbjct: 411 RYLE 414
>gi|283770547|ref|ZP_06343439.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus H19]
gi|283460694|gb|EFC07784.1| GTP-binding protein engA [Staphylococcus aureus subsp. aureus H19]
Length = 436
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 257/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTYDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + DFY LG G P+ IS +G G+ + L+ +++ F ++E
Sbjct: 122 DNMEMRTDVYDFYSLGFGEPYPISGSHGLGLGDLLDAVVS-------HFGEEEEDPYDED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD+I + + Y + Y+LIDTAG+
Sbjct: 175 T-IRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYEGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKAVVIVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++ ++K+ FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERTRLRTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP V+ N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVALEPPTFVVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|408420958|ref|YP_006762372.1| GTP-binding protein [Desulfobacula toluolica Tol2]
gi|405108171|emb|CCK81668.1| GTP-binding protein [Desulfobacula toluolica Tol2]
Length = 482
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 251/422 (59%), Gaps = 12/422 (2%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MKPV+ L+GRPNVGKSTLFNR+ SR ALV ++PG+TRDRHY + F +IDTGGF
Sbjct: 1 MKPVVALLGRPNVGKSTLFNRIIRSRQALVDDFPGVTRDRHYADAQWNDIDFTVIDTGGF 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
++ +Q A ++D+++FI+DGR GL D+ + +FLR+ +P+ ++NK
Sbjct: 61 LSSDDDYFASQIKEQLTAAADQADVLVFILDGRAGLSPYDRELADFLRRMSKPVFYLVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
EN L +FY LGI + + ISA +G G+ +FL++++ Y + + E
Sbjct: 121 IENYKQHDDLAEFYSLGIDHFYEISAEHGIGVGDFLDDLIQTLPEYDQAQDEGETP---- 176
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
I++AIVG+PNVGKS+L N L GE RV+ + GTTRD+I+ EY ++++L+DTAG
Sbjct: 177 ---IRIAIVGRPNVGKSSLANRLFGEQRVVVNEKAGTTRDAIELSVEYKGRQFVLVDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+ K + +EKFS++K+LKS+ + +V ++L+D+++ I+ QDI IA + + G +
Sbjct: 234 IRRKGKVTQKLEKFSILKSLKSLDDCDVALILIDSEEGITDQDITIAGYAEDRGCGAMFL 293
Query: 300 VNKWDSIIHNQRKIIK---NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
+NKWD ++ +RK +K +++ K FLS+A ISA+ + ++ + ++
Sbjct: 294 LNKWD-LLDKERKNVKKYMEDLRYKSKFLSYAPAMTISALTGQRCHKILDEVVKIHKEYC 352
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
++T + R + A+ P K R K YA Q PP V N K + Y+R
Sbjct: 353 HRINTGVLNRIIEDAVYRTEPSLYKGKRLKFFYATQVATRPPCFVCFVNFPKAVHFSYER 412
Query: 417 YL 418
YL
Sbjct: 413 YL 414
>gi|118443488|ref|YP_878327.1| GTP-binding protein EngA [Clostridium novyi NT]
gi|166224330|sp|A0Q125.1|DER_CLONN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|118133944|gb|ABK60988.1| GTP-binding protein engA [Clostridium novyi NT]
Length = 438
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 256/422 (60%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L R A+V + PG+TRDR Y E +F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTLFNKLAGKRIAIVDDMPGVTRDRIYAEAEWLNNNFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
PE I+ +M +Q + AI +D+++FIVDG+QGL + D+ + + LRK+ + IVL +NK
Sbjct: 63 PENDDIIVAQMRRQAQLAIEMADVVLFIVDGKQGLTDADREVAHMLRKASKSIVLAVNKI 122
Query: 122 E--NINSSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+ ++ +I +FY LG+G+P ISA G G+ + L+ ++ +KF +
Sbjct: 123 DRRQLDDNI-YEFYNLGLGDPMPISASQGLGLGDLLDEVI------EKFPEGN--VEEEE 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
EYI++A++G+PNVGKS+LIN +LGE + I + PGTTRD++ S E K++LIDTAG
Sbjct: 174 DEYIRIAMIGRPNVGKSSLINKILGEEKHIVSNIPGTTRDAVDSYVETEEGKFVLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR++K E +E++S ++TL SI A+V IL++DA ++I+ QD I + +E ++++V
Sbjct: 234 LRRKSKIKEQVERYSAVRTLASIENADVCILMIDATEDIAEQDERIIGYAHEINKAILVI 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD I + + + K+ ++ KL+FL +A F FISA ++ + Y +
Sbjct: 294 VNKWDLIEKDDKTMKNFKDKLRTKLSFLPYASFLFISAKTGQRVHKVLGMAKECYGNYCK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ T + + A+ P R K+ Y Q G PP V N + + Y+RY
Sbjct: 354 RIKTGILNDIINKAVLMKEPPVMGTRRLKIYYVTQIGTKPPTFVFFVNDPELLHFSYRRY 413
Query: 418 LE 419
LE
Sbjct: 414 LE 415
>gi|401679822|ref|ZP_10811746.1| ribosome-associated GTPase EngA [Veillonella sp. ACP1]
gi|400218949|gb|EJO49820.1| ribosome-associated GTPase EngA [Veillonella sp. ACP1]
Length = 444
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 163/424 (38%), Positives = 259/424 (61%), Gaps = 15/424 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN + N R ++V + PG+TRDR Y + + F +IDTGG E
Sbjct: 3 KPLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTGGIE 62
Query: 62 --PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVIN 119
E I M Q + AI E+D+I+F+VDG+QG+V D+ + N LR SG+P+VLV+N
Sbjct: 63 FVTENSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRTSGKPVVLVVN 122
Query: 120 KSENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
K +++N ++ +FY LG+G+P ISA + + L++ + P TN+
Sbjct: 123 KIDSVNQEPNIYEFYNLGLGDPIGISAKNLMNLGDLLDDTVKHFPPVG--------TNVD 174
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
+ I VAI+G+PNVGKS+L N+LLG++RVI D GTTRDSI + + + ++K++LIDTA
Sbjct: 175 EEDTIHVAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTHWTHGDQKFVLIDTA 234
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
G+RR++K E +E++S++++L+S+ +++V+ +LD ++ QD IA + YE+G+ +I+
Sbjct: 235 GMRRKSKIDEAVERYSIVRSLRSVDRSDIVVFVLDGVDGVTEQDKKIAGYAYEAGKGVII 294
Query: 299 CVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD + + + ++ +I +L FL FA F SA+ I+ + + V +
Sbjct: 295 VVNKWDLVEKDDKTTLRYTEDIYDELGFLQFAPILFASALTKQRIHRLADMLKFVSEQQY 354
Query: 357 IHLSTSRITRALISAIKNHP-PCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYK 415
+ST + + L A +P P R I PK+ Y Q PP ++ N + I Y
Sbjct: 355 RRVSTGTLNQLLQDAQTVNPVPSRNGRI-PKIYYMTQASVKPPTFILFVNEPELIHFSYM 413
Query: 416 RYLE 419
R+LE
Sbjct: 414 RFLE 417
>gi|337747035|ref|YP_004641197.1| protein EngA [Paenibacillus mucilaginosus KNP414]
gi|336298224|gb|AEI41327.1| EngA [Paenibacillus mucilaginosus KNP414]
Length = 469
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 256/425 (60%), Gaps = 19/425 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ + A+V + PG+TRDR YG G + F IIDTGG E
Sbjct: 32 RPVIAIVGRPNVGKSTIFNRIIGDKLAIVEDKPGVTRDRLYGRGEWLDQEFSIIDTGGIE 91
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
E + I+ + Q + AI E+D+IIF+VD + G+ D + L +S +P+V+ +NK
Sbjct: 92 IEGEDHILRSVRVQAELAIEEADVIIFMVDAKAGVTPADSEVAQILFRSQKPVVVAVNKV 151
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + + +FY +G G IS +G GI + LE ++ K F +
Sbjct: 152 DNLQRADDIYEFYSMGFGEIVGISGAHGTGIGDLLEEVV------------KHFPDTVDE 199
Query: 181 EY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
EY I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + +KY++ID
Sbjct: 200 EYGEDVIRVALIGRPNVGKSSLVNAILGEERVIVSDMAGTTRDAIDTPFEKDGQKYVIID 259
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K +E EK+SV++ +K+I A+VV++++D + I QD ++A + +E+G++
Sbjct: 260 TAGMRKRGKVYENTEKYSVMRAMKAIERADVVLVVIDGEVGIIEQDKHVAGYAHEAGKAA 319
Query: 297 IVCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
+ VNKWD + +++ + + I+ F+++A F+SA ++ + +N V ++
Sbjct: 320 VFVVNKWDVVEKDEKTMHQFEQKIRDHFLFMTYAPVVFLSAKTKQRLHKLLPVVNTVSEA 379
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ + T + + A+ +PP K R ++ YA Q PP I+ N + + Y
Sbjct: 380 HAMRIPTHVLNDVVSDAVAINPPPTDKGRRMRINYATQVAVKPPTIIFFVNDPELMHFSY 439
Query: 415 KRYLE 419
+RYL+
Sbjct: 440 QRYLD 444
>gi|363894034|ref|ZP_09321126.1| GTP-binding protein engA [Eubacteriaceae bacterium ACC19a]
gi|361963108|gb|EHL16196.1| GTP-binding protein engA [Eubacteriaceae bacterium ACC19a]
Length = 440
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 252/423 (59%), Gaps = 13/423 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
MK + +VGRPNVGKSTLFNRL R ++V + PG+TRDR + + SF +IDTGG
Sbjct: 1 MKKTVAIVGRPNVGKSTLFNRLVGERISIVEDTPGVTRDRIFADVSWLNYSFTLIDTGGI 60
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
E + I M KQ + AI +D+I+F+VDG+ GLV QD + + LRKS +P+++++NK
Sbjct: 61 ETDTDNLIPEMMRKQAQIAIDMADVIMFVVDGKAGLVPQDFEVADLLRKSKKPVIVIVNK 120
Query: 121 SENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N DFY+LG N + IS+ G G+ + L+ I+ + F K+E +
Sbjct: 121 VDNSRLPDDYYDFYQLGFENMYAISSTQGLGLGDMLDEIVAL-------FPKEELLEVED 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
IKVAI+GKPN GKS+++N+L+GE R I GTTRD+I N Y IDTAG
Sbjct: 174 -NSIKVAIIGKPNAGKSSILNALIGEERTIVSPIAGTTRDAIDEKCNINGIDYTFIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR++NK ++ IEK+SV++ +I +A+VV++++DA ++ QD IA +E+G+ +IV
Sbjct: 233 IRKKNKIYDNIEKYSVLRAYSAIEKADVVLVVIDATTMVTEQDTKIAGLAHEAGKCVIVV 292
Query: 300 VNKWDSIIHNQRKIIKN---NIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD +I + +++ +++ L ++ +A FISA +N+ +E IN VY+S
Sbjct: 293 VNKWD-LIQKETNTMRDYTADVRNSLAYMQYAPVEFISAKTGKRLNNIVELINKVYESGR 351
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
LST + + A+ + P K R K+ YA Q G PP VI N + Y+R
Sbjct: 352 KRLSTGVLNDVIGDAVMLNQPPSDKGKRLKIYYATQTGVLPPTFVIFINDKELFHFSYQR 411
Query: 417 YLE 419
YLE
Sbjct: 412 YLE 414
>gi|401565470|ref|ZP_10806308.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC6]
gi|400187219|gb|EJO21415.1| ribosome-associated GTPase EngA [Selenomonas sp. FOBRC6]
Length = 441
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 156/422 (36%), Positives = 254/422 (60%), Gaps = 12/422 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN++ R ++V + PG+TRDR Y + F IIDTGG E
Sbjct: 3 KPIVAVVGRPNVGKSTLFNQIGKKRVSIVDDMPGVTRDRIYMDAEWLNHEFTIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ I+ M Q + A+ E+D+I+F+VDGR GL D+ + LR++ +P++L +NK
Sbjct: 63 FDESDHILRSMRSQAELAMEEADVILFLVDGRAGLTSSDEEVARLLRRTKKPVILAVNKI 122
Query: 122 ENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
++ + S+ DFY LG+G+P ISA + + L+ I+ P +E ++
Sbjct: 123 DSFDRESLIYDFYALGLGDPIPISASNAMNLGDLLDAIVA-AFP-------EEMSDGTES 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
+ I +A+VG+PNVGKS+L+N LLGE RVI D PGTTRD+I + F + KY+LIDTAG+
Sbjct: 175 DEIAIAVVGRPNVGKSSLVNRLLGEERVIVSDVPGTTRDAIDTHFTRDGAKYLLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
RR+ K +E++SV+++L++I A VV+++++A + I QD IA +++ESG+ +I+ V
Sbjct: 235 RRKGKITLPVERYSVMRSLRAIDRAGVVLMVINAAEGILEQDTKIAGYVHESGKGVIIVV 294
Query: 301 NKWDSIIHNQRKI---IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
NKWD K +++++KL FL +A + SA+ + E + +V + +
Sbjct: 295 NKWDIFPEKHDKSTLRFTDDLREKLGFLQYAPVLYTSALTGQRVERVTELVKYVAEQQSM 354
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ TS + + A+ +PP KK + K+ + Q G PP ++ N + + Y R+
Sbjct: 355 RIKTSVLNELIRDAVSVNPPPTKKGKQLKILFVTQVGIAPPTFIVFVNDPELMHFSYLRF 414
Query: 418 LE 419
+E
Sbjct: 415 IE 416
>gi|332982413|ref|YP_004463854.1| ribosome-associated GTPase EngA [Mahella australiensis 50-1 BON]
gi|332700091|gb|AEE97032.1| ribosome-associated GTPase EngA [Mahella australiensis 50-1 BON]
Length = 437
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 253/422 (59%), Gaps = 14/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
K + ++GRPNVGKSTLFNRL R ++V + PG+TRDR Y + K F ++DTGG +
Sbjct: 3 KATVAIIGRPNVGKSTLFNRLVGRRISIVDDTPGITRDRIYADVEWTGKIFSLVDTGGID 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
K I+++M +Q + AI +D+I+ +VD +G+ D+ + + LR+S + ++LV NK
Sbjct: 63 FSGKDSIVNQMIRQAQYAIDTADVILLVVDANEGMTSADEEVADILRRSNKSVLLVCNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILT-IELPYKKFFKKKEFTNIHS 179
+N N L DFY+LG+G+P ISA G GI + L+ I+ I + +I
Sbjct: 123 DNFNRKDLLYDFYKLGLGDPIPISAGNGLGIGDLLDKIVAHINVS----------VDIID 172
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E I++A++GKPN GKS+++N LLG+ RVI D PGTTRD+I L E+ +YILIDTAG
Sbjct: 173 EETIRIAVIGKPNAGKSSIVNRLLGQERVIVSDQPGTTRDAIDVLIEHEGDRYILIDTAG 232
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
+RR+ K E +E++SV + L+++ ++V L++DA + ++ QD IA F +E G+ LIV
Sbjct: 233 LRRKAKINEAVERYSVSRALEAVQRSDVAALVIDAVEGVTEQDAKIAGFAHEKGKGLIVL 292
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
+NKWD I + + + K +I +KL F+ +A FISA ++ + + +V++ S +
Sbjct: 293 LNKWDLIEKDNKTVSRYKQDIAEKLGFIGYAPVLFISAKTGQRMDKILPMVKYVFEQSSM 352
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
+ST + + A+ P K K+ YA Q PP V+ N + + Y+RY
Sbjct: 353 RISTGVLNDVIREAVAISAPPSSKGRSLKIYYATQVAVRPPTFVLFVNDTELMHFSYERY 412
Query: 418 LE 419
LE
Sbjct: 413 LE 414
>gi|386723501|ref|YP_006189827.1| GTP-binding protein Der [Paenibacillus mucilaginosus K02]
gi|384090626|gb|AFH62062.1| GTP-binding protein Der [Paenibacillus mucilaginosus K02]
Length = 440
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 256/425 (60%), Gaps = 19/425 (4%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+PV+ +VGRPNVGKST+FNR+ + A+V + PG+TRDR YG G + F IIDTGG E
Sbjct: 3 RPVIAIVGRPNVGKSTIFNRIIGDKLAIVEDKPGVTRDRLYGRGEWLDQEFSIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
E + I+ + Q + AI E+D+IIF+VD + G+ D + L +S +P+V+ +NK
Sbjct: 63 IEGEDHILRSVRVQAELAIEEADVIIFMVDAKAGVTPADSEVAQILFRSQKPVVVAVNKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + + +FY +G G IS +G GI + LE ++ K F +
Sbjct: 123 DNLQRADDIYEFYSMGFGEIVGISGAHGTGIGDLLEEVV------------KHFPDTVDE 170
Query: 181 EY----IKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILID 236
EY I+VA++G+PNVGKS+L+N++LGE RVI D GTTRD+I + FE + +KY++ID
Sbjct: 171 EYGEDVIRVALIGRPNVGKSSLVNAILGEERVIVSDMAGTTRDAIDTPFEKDGQKYVIID 230
Query: 237 TAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSL 296
TAG+R+R K +E EK+SV++ +K+I A+VV++++D + I QD ++A + +E+G++
Sbjct: 231 TAGMRKRGKVYENTEKYSVMRAMKAIERADVVLVVIDGEVGIIEQDKHVAGYAHEAGKAA 290
Query: 297 IVCVNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDS 354
+ VNKWD + +++ + + I+ F+++A F+SA ++ + +N V ++
Sbjct: 291 VFVVNKWDIVEKDEKTMHQFEQKIRDHFLFMTYAPVVFLSAKTKQRLHKLLPVVNTVSEA 350
Query: 355 SIIHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDY 414
+ + T + + A+ +PP K R ++ YA Q PP I+ N + + Y
Sbjct: 351 HAMRIPTHVLNDVVSDAVAINPPPTDKGRRMRINYATQVAVKPPTIIFFVNDPELMHFSY 410
Query: 415 KRYLE 419
+RYL+
Sbjct: 411 QRYLD 415
>gi|167772322|ref|ZP_02444375.1| hypothetical protein ANACOL_03699 [Anaerotruncus colihominis DSM
17241]
gi|167665425|gb|EDS09555.1| ribosome biogenesis GTPase Der [Anaerotruncus colihominis DSM
17241]
Length = 442
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 249/423 (58%), Gaps = 14/423 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKSTLFN+L +R ++V + PG+TRDR Y E K+ +++DTGG E
Sbjct: 3 KPLIAIVGRPNVGKSTLFNKLAGARISIVEDTPGVTRDRVYYECEWRAKTVMLVDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P I+ +M +Q + AI +D+II + D + G+ D+ + L+KSG+P+VL +NK
Sbjct: 63 PYSTDKILSQMRRQAQLAIDSADVIILVTDIQSGVTATDQDVAVMLQKSGKPVVLAVNKC 122
Query: 122 ENINSSISLDFYE---LGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIH 178
+ + + DFYE LG+G+P +S+++G+G + L+ + F + E+
Sbjct: 123 DRLGD-VPPDFYEFYNLGLGDPIAVSSVHGHGTGDLLDACYA----HIDFNRADEYGE-- 175
Query: 179 SIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTA 238
EY+KVA++GKPNVGKS+L+N + GE R I D GTTRD++ ++ E +++ IDTA
Sbjct: 176 --EYVKVAVIGKPNVGKSSLVNRVAGEERSIVSDMAGTTRDAVDTVVENEYGRFVFIDTA 233
Query: 239 GIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIV 298
GIRR+++ E IE++SV++ ++ ++V ++++DA + QD IA + +E G+ IV
Sbjct: 234 GIRRKSRVEEQIERYSVLRAYMAVDRSDVCVIMIDATVGFTEQDSKIAGYAHERGKGCIV 293
Query: 299 CVNKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSI 356
VNKWD+I + + + + ++ +F+S+A FISA+ I+ E I +V +
Sbjct: 294 AVNKWDAIEKDGKTMQTFRKKLETDFSFMSYAPILFISAMTGQRIDKLFEQIQYVNSQNA 353
Query: 357 IHLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKR 416
+ +ST R+ L A P K R ++ + Q PP V N + Y+R
Sbjct: 354 MRISTGRLNDMLSVATARVQPPTDKGKRLRIYFCTQAATRPPTFVFFCNNSELFHFSYQR 413
Query: 417 YLE 419
YLE
Sbjct: 414 YLE 416
>gi|297544868|ref|YP_003677170.1| ribosome-associated GTPase EngA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842643|gb|ADH61159.1| ribosome-associated GTPase EngA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 439
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 259/422 (61%), Gaps = 13/422 (3%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
+ ++ +VGRPNVGKSTLFN++ R ++V + PG+TRDR G K FI++DTGG +
Sbjct: 3 RAMVSIVGRPNVGKSTLFNKIMGKRISIVEDKPGVTRDRICGNAEWLNKKFILVDTGGLD 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
P+ + I ++ Q + AI S++I+F+VD ++GL+ +D+ I + LR++ + I+LV NK
Sbjct: 63 PDAEDIIFSKVRLQVEAAIEASEVILFLVDAKEGLMPEDEEIADILRRAKKEIILVCNKV 122
Query: 122 ENINS--SISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
+N DF+ LG+GNP ISA G GI L+ I+ +LP + +S
Sbjct: 123 DNFKELPPTYYDFFSLGLGNPIPISASNGLGIGELLDEIVK-KLPQEGLE--------YS 173
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
E IK+A++G+PNVGKS+L+N +LGE RVI D PGTTRD+I + F + K Y+LIDTAG
Sbjct: 174 EETIKIAVIGRPNVGKSSLVNKILGEERVIVSDIPGTTRDAIDTPFSKDGKNYVLIDTAG 233
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IRR+++ E IE++SV++ L +I +++ +L++DA + + QD IA + +E+G+ +I+
Sbjct: 234 IRRKSRISESIERYSVLRALTAIERSDICLLMIDAIEGPAEQDTKIAGYAFENGKGIIIV 293
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
VNKWD+I N + I++KL+F+SFA FISA ++ +++++ V+
Sbjct: 294 VNKWDAIKKNNNTVNEYTKMIREKLSFISFAPILFISAKTGQRVHRVLQTVDKVWGEYNK 353
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T + L A+ PP K + K+ Y Q G PP V+ N + + Y R+
Sbjct: 354 RITTGLLNNVLNEAMLMFPPPADKGKQLKVYYTSQVGIKPPSFVVFVNDPELMHFSYLRF 413
Query: 418 LE 419
+E
Sbjct: 414 ME 415
>gi|421859201|ref|ZP_16291440.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
gi|410831266|dbj|GAC41877.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
Length = 440
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 256/421 (60%), Gaps = 11/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ +VGRPNVGKST+FNR+ R A+V + PG+TRDR YG G K F IIDTGG E
Sbjct: 3 KPVVAIVGRPNVGKSTIFNRVIGDRLAIVEDKPGVTRDRIYGTGEWNGKPFSIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
+ ++ + Q + AI E+D+I+F+ + + G+ + D+ + L +S +P+VL INK
Sbjct: 63 VYGEDEMLRSIRVQAELAIEEADVIVFMCEAKSGVTQADEEVAEILFRSAKPVVLAINKV 122
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + +FY LG G+P IS +G G+ + L+ ++ +F + E +
Sbjct: 123 DNLQRMDDVYEFYSLGFGDPVPISGSHGTGLGDLLDEVV------HRFPETTEEEYDEDV 176
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+VA++G+PNVGKS+L+N++LGE+RVI D GTTRD+I + FE + ++++LIDTAG+
Sbjct: 177 --IRVALIGRPNVGKSSLVNAILGEDRVIVSDIAGTTRDAIDTPFEKDGQRFVLIDTAGM 234
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R+R K +E EK+SV++++K+I A+VV+++++ ++ I QD +IA + E+G++ + V
Sbjct: 235 RKRGKVYETTEKYSVMRSMKAIERADVVLVVINGEEGIIEQDKHIAGYADEAGKAALFIV 294
Query: 301 NKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD + N R + + I+ F+ +A F+SA ++ + I HV +
Sbjct: 295 NKWDVVEKNDRTMHEFETKIRDHFLFMPYAPIVFLSAKTRQRLHKLLPVIEHVAEKHAKR 354
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ T + + A+ +PP K R ++ YA Q PP ++I N + + Y+RYL
Sbjct: 355 IPTHLLNDVISDAVAYNPPPTDKGRRLRINYATQVAVKPPTMIIFVNDPELMHFSYERYL 414
Query: 419 E 419
E
Sbjct: 415 E 415
>gi|383762669|ref|YP_005441651.1| GTPase Der [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381382937|dbj|BAL99753.1| GTPase Der [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 456
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 168/436 (38%), Positives = 260/436 (59%), Gaps = 28/436 (6%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KPV+ LVGRPNVGKSTLFNRL A+V + PG TRDR YGE FI+IDTGG E
Sbjct: 5 KPVVALVGRPNVGKSTLFNRLIGRPVAIVEDEPGTTRDRIYGESDWNGVGFIVIDTGGLE 64
Query: 62 -PEVKK------------GIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLR 108
PE + ++ + Q + AI E+D II IVDGR GL D+ I + LR
Sbjct: 65 APETMRTRHSEGAQTTSESLVASVQNQAQLAIDEADAIIMIVDGRSGLTAADEEIASVLR 124
Query: 109 KSGQPIVLVINKSENIN-SSISLDFYELGIGNPHIISALYGNGIKNFLENILTIELPYKK 167
+S +P+ L +NK+E+ +++F+ LG+G P+ ISA +G+G+ + L+ ++ + Y
Sbjct: 125 QSNKPVFLAVNKAESQEVRQNAVEFWALGLGEPYPISAYHGDGVGDLLDEVVKVLPAYPA 184
Query: 168 FFKKKEFTNIHSIEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEY 227
++KE I VAIVG+PNVGKS+L+N+L+G+ R I PGTTRD I
Sbjct: 185 EEEEKET--------IGVAIVGRPNVGKSSLLNALVGQERSIVSAVPGTTRDPIDMEITC 236
Query: 228 NNKKYILIDTAGIRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIAN 287
++ LIDTAGIRRR + + IE++SV++++++I ++V +LL+DAQ+ ++AQD +IA
Sbjct: 237 EGQRITLIDTAGIRRRGRIEQGIEQYSVLRSMRAIDRSDVALLLIDAQEGVTAQDTHIAG 296
Query: 288 FIYESGRSLIVCVNKWDSIIHNQRKIIK--NNIKKKLNFLSFAMFNFISAIKLNNINSFM 345
++ E +S++V VNKWD++ + +++ N ++++LNF+ + FISA I++ +
Sbjct: 297 YVLERYKSVVVVVNKWDAVEKDSHTMVEYTNAVREQLNFMPYVPVLFISAKTHQRIHTVL 356
Query: 346 ESINHVYDSSIIHLSTSRITRALISAIKN-HPPCRK-KLIRPKLRYAHQGGKNPPIIVIH 403
+ V + LSTS + + L A + P R+ + +R + Y Q +PP VI
Sbjct: 357 PTALRVAAARRHRLSTSEVNQLLSEAYDSTQIPVRQGRALR--IYYGAQVDNDPPTFVIF 414
Query: 404 GNRLKYIGNDYKRYLE 419
N + Y+RYLE
Sbjct: 415 VNDKDLVHFSYERYLE 430
>gi|421873079|ref|ZP_16304695.1| ribosome-associated GTPase EngA [Brevibacillus laterosporus GI-9]
gi|372458025|emb|CCF14244.1| ribosome-associated GTPase EngA [Brevibacillus laterosporus GI-9]
Length = 437
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 257/420 (61%), Gaps = 11/420 (2%)
Query: 3 PVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFEP 62
PV+ +VGRPNVGKST+FNRL R A+V + PG+TRDR Y +G + F +IDTGG E
Sbjct: 4 PVVAIVGRPNVGKSTIFNRLIGERVAIVEDKPGVTRDRLYAKGEWLNREFHVIDTGGIEF 63
Query: 63 EVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKSE 122
I+ +M Q + AI E+D+II IVD R G+ + D + L ++G+PIVL +NK +
Sbjct: 64 AETDQILTQMRYQAELAIDEADVIILIVDVRSGVTDADLNVARMLNRTGKPIVLAVNKVD 123
Query: 123 NINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSIE 181
N + +FY+LG+G P IS +G G+ + L+ + P + K+ +
Sbjct: 124 NFEMRNDIYEFYQLGVGEPFPISGSHGLGLGDMLDEVFHHLPPVDEEEKRDDV------- 176
Query: 182 YIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGIR 241
I+V+I+G+PNVGKS+L N++LGE RVI + GTTRD+I + F + ++Y+L+DTAG+R
Sbjct: 177 -IRVSIIGRPNVGKSSLTNAILGEERVIVSEIAGTTRDAIDTPFVRDGQEYVLVDTAGMR 235
Query: 242 RRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCVN 301
++ K +E EK+SV++ LK+I +++VV+++++ ++ I QD IA + +E+GR +I+ VN
Sbjct: 236 KKGKVYEGTEKYSVMRALKAIEDSDVVLVVINGEEGIIEQDKKIAGYAHEAGRGVIIVVN 295
Query: 302 KWDSIIHNQRKIIKNN--IKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIHL 359
KWD++ + + + + I+++ +LS+A ++SA +++ + +N V DS + +
Sbjct: 296 KWDALEKDDKTMQRFTELIREEFKYLSYAPILYVSAKTKQRVHTILPKVNAVADSHSMRV 355
Query: 360 STSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYLE 419
+TS + + A PP + R K+ Y Q PP ++ N + + Y+RYLE
Sbjct: 356 NTSVLNDLITDATIMAPPPTDRGKRLKINYTTQVAVKPPTFIVFVNDPELMHFSYERYLE 415
>gi|421150492|ref|ZP_15610148.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|394329882|gb|EJE55984.1| GTP-binding protein EngA [Staphylococcus aureus subsp. aureus str.
Newbould 305]
Length = 436
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 258/421 (61%), Gaps = 12/421 (2%)
Query: 2 KPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGFE 61
KP++ +VGRPNVGKST+FNR+ R ++V + PG+TRDR Y G F IIDTGG E
Sbjct: 3 KPIVAIVGRPNVGKSTIFNRIVGERVSIVEDTPGVTRDRIYSSGEWLTHDFNIIDTGGIE 62
Query: 62 PEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINKS 121
++ Q + AI E+D+IIF+V+ R+GL + D+++ L KS +P+VL +NK
Sbjct: 63 IG-DAPFQTQIRAQAEIAIDEADVIIFMVNVREGLTQSDEMVAQILYKSKKPVVLAVNKV 121
Query: 122 ENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHSI 180
+N+ + DF+ LG G P+ IS +G G+ + L+ +++ F ++E
Sbjct: 122 DNMEMRTDVYDFFSLGFGEPYPISGSHGLGLGDLLDAVVS-------HFGEEEEDPYDED 174
Query: 181 EYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAGI 240
I+++I+G+PNVGKS+L+N++LGE+RVI + GTTRD+I + + Y+ + Y+LIDTAG+
Sbjct: 175 T-IRLSIIGRPNVGKSSLVNAILGEDRVIVSNVAGTTRDAIDTEYSYDGQDYVLIDTAGM 233
Query: 241 RRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVCV 300
R++ K +E EK+SV++ LK+I +NVV++++DA+Q I QD +A + +E G+++++ V
Sbjct: 234 RKKGKVYESTEKYSVLRALKAIERSNVVLVVIDAEQGIIEQDKRVAGYAHEQGKAVVIVV 293
Query: 301 NKWDSIIHNQR--KIIKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSIIH 358
NKWD++ + + K ++ ++K+ FL +A F+SA + + + IN ++
Sbjct: 294 NKWDTVEKDSKTMKKFEDEVRKEFQFLDYAQIAFVSAKERTRLRTLFPYINEASENHKKR 353
Query: 359 LSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRYL 418
+ +S + + AI +P K R + YA Q PP V+ N ++ + YKRYL
Sbjct: 354 VQSSTLNEVVTDAISMNPTPTDKGRRLNVFYATQVAIEPPTFVVFVNDVELMHFSYKRYL 413
Query: 419 E 419
E
Sbjct: 414 E 414
>gi|223985795|ref|ZP_03635838.1| hypothetical protein HOLDEFILI_03144 [Holdemania filiformis DSM
12042]
gi|223962243|gb|EEF66712.1| hypothetical protein HOLDEFILI_03144 [Holdemania filiformis DSM
12042]
Length = 434
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 261/422 (61%), Gaps = 14/422 (3%)
Query: 1 MKPVLVLVGRPNVGKSTLFNRLTNSRDALVANYPGLTRDRHYGEGYIGKKSFIIIDTGGF 60
+K V+ +VGRPNVGKST+FNR+ R ++V + PG+TRDR YG+G + F +IDTGG
Sbjct: 2 IKGVVAIVGRPNVGKSTIFNRILGERVSIVEDTPGVTRDRIYGKGTWLTQDFRLIDTGGI 61
Query: 61 EPEVKKGIMHEMTKQTKQAIIESDIIIFIVDGRQGLVEQDKLITNFLRKSGQPIVLVINK 120
+ E + E+ Q + AI E+D+I+F+V+GR G+ D+ I LR+SG+P+VL +NK
Sbjct: 62 QLE-NQPFQEEIKAQVEIAIEEADVILFVVNGRDGVTGDDEFIARMLRRSGKPVVLAVNK 120
Query: 121 SENINSSISL-DFYELGIGNPHIISALYGNGIKNFLENILTIELPYKKFFKKKEFTNIHS 179
++ ++ +FY LG+ P +S +G GI + ++ ++ F +K++
Sbjct: 121 IDDATLQGNIYEFYALGLSEPIAVSGSHGIGIGDVMDALV------GAFPEKQQ----PE 170
Query: 180 IEYIKVAIVGKPNVGKSTLINSLLGENRVITYDTPGTTRDSIKSLFEYNNKKYILIDTAG 239
+E I+ AI+G+PNVGKS+L+N+LL E RVI D GTTRD++ + FE++ K+Y+++DTAG
Sbjct: 171 LEGIRFAIIGRPNVGKSSLVNALLKEERVIVSDIEGTTRDAVDTPFEHDGKQYVVVDTAG 230
Query: 240 IRRRNKTFEVIEKFSVIKTLKSILEANVVILLLDAQQNISAQDINIANFIYESGRSLIVC 299
IR+R K +E IEK+SV++ + +I +VV+ ++D + I QD ++A + +E+G+ +I+
Sbjct: 231 IRKRGKVYENIEKYSVLRAMSAIERCDVVLFVIDGESGIREQDKHVAGYAHEAGKPIIIV 290
Query: 300 VNKWDSIIHNQRKI--IKNNIKKKLNFLSFAMFNFISAIKLNNINSFMESINHVYDSSII 357
NKWD++ +++ + + I+ + +LS+A F+SA +N+ + I+ VY S +
Sbjct: 291 YNKWDAVEKDEKTMNRVTEQIRAQFVYLSYAPVLFVSAKTHQRVNTLLPMIDDVYHYSQL 350
Query: 358 HLSTSRITRALISAIKNHPPCRKKLIRPKLRYAHQGGKNPPIIVIHGNRLKYIGNDYKRY 417
++T+ + ++ A P R K+ YA Q PP V+ N + + Y+RY
Sbjct: 351 RIATNVLNEVVMDAQLTTPAPTHNGQRLKILYASQVAVAPPTFVLFVNDPQLLHFSYRRY 410
Query: 418 LE 419
+E
Sbjct: 411 IE 412
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.139 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,331,399,431
Number of Sequences: 23463169
Number of extensions: 264501571
Number of successful extensions: 1207999
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15245
Number of HSP's successfully gapped in prelim test: 16254
Number of HSP's that attempted gapping in prelim test: 1122631
Number of HSP's gapped (non-prelim): 62162
length of query: 419
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 274
effective length of database: 8,957,035,862
effective search space: 2454227826188
effective search space used: 2454227826188
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)